Your job contains 1 sequence.
>011775
MNGEGQEEKMERVVFMWGYLPGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAI
SDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVY
TWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRG
SGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIG
QVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGN
YVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAG
LWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV
IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAVPPT
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 011775
(477 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2099986 - symbol:AT3G55580 species:3702 "Arabi... 1536 1.3e-157 1
TAIR|locus:2163986 - symbol:UVR8 "UVB-RESISTANCE 8" speci... 306 7.7e-35 3
RGD|1309901 - symbol:Rccd1 "RCC1 domain containing 1" spe... 169 7.3e-26 3
MGI|MGI:2444156 - symbol:Rccd1 "RCC1 domain containing 1"... 163 5.2e-25 3
UNIPROTKB|G3V2I3 - symbol:RCCD1 "RCC1 domain-containing p... 168 9.9e-25 3
UNIPROTKB|F1MNS0 - symbol:HERC1 "Uncharacterized protein"... 253 1.2e-23 3
UNIPROTKB|F1S098 - symbol:HERC1 "Uncharacterized protein"... 253 1.2e-23 3
UNIPROTKB|Q15751 - symbol:HERC1 "Probable E3 ubiquitin-pr... 253 1.2e-23 3
UNIPROTKB|E2QYQ5 - symbol:HERC1 "Uncharacterized protein"... 253 1.2e-23 3
UNIPROTKB|E1C4H7 - symbol:HERC1 "Uncharacterized protein"... 240 4.8e-22 3
UNIPROTKB|F1NDJ4 - symbol:RCCD1 "Uncharacterized protein"... 162 1.1e-21 2
TAIR|locus:2156233 - symbol:RUG2 "RCC1/UVR8/GEF-like 2" s... 204 1.4e-21 3
FB|FBgn0031107 - symbol:HERC2 "HECT and RLD domain contai... 222 2.1e-21 3
TAIR|locus:504956339 - symbol:RUG1 "AT5G08710" species:37... 222 5.3e-21 2
TAIR|locus:2146142 - symbol:AT5G16040 "AT5G16040" species... 184 1.0e-20 4
UNIPROTKB|F1N7C1 - symbol:HERC6 "Uncharacterized protein"... 230 1.1e-20 2
UNIPROTKB|J9NWD8 - symbol:HERC1 "Uncharacterized protein"... 253 4.2e-20 2
MGI|MGI:1914595 - symbol:Herc4 "hect domain and RLD 4" sp... 220 1.7e-19 2
TAIR|locus:2076889 - symbol:AT3G02510 "AT3G02510" species... 184 2.5e-19 4
FB|FBgn0035207 - symbol:CG9153 species:7227 "Drosophila m... 204 5.2e-19 2
UNIPROTKB|E1BW48 - symbol:HERC2 "Uncharacterized protein"... 210 7.7e-19 4
UNIPROTKB|E1C8K2 - symbol:HERC2 "Uncharacterized protein"... 210 7.7e-19 4
TAIR|locus:2205794 - symbol:AT1G27060 species:3702 "Arabi... 184 3.7e-18 2
UNIPROTKB|O95199 - symbol:RCBTB2 "RCC1 and BTB domain-con... 245 4.3e-18 1
UNIPROTKB|F1PBB3 - symbol:HERC6 "Uncharacterized protein"... 210 4.5e-18 2
ZFIN|ZDB-GENE-070718-6 - symbol:herc2 "hect domain and RL... 203 5.1e-18 4
UNIPROTKB|G3MX12 - symbol:HERC2 "Uncharacterized protein"... 210 5.3e-18 3
UNIPROTKB|E1B782 - symbol:HERC2 "Uncharacterized protein"... 210 5.6e-18 3
MGI|MGI:1917200 - symbol:Rcbtb2 "regulator of chromosome ... 244 5.6e-18 1
RGD|1307989 - symbol:Herc2 "HECT and RLD domain containin... 198 6.7e-18 3
UNIPROTKB|F1M560 - symbol:Herc2 "Protein Herc2" species:1... 198 6.9e-18 3
UNIPROTKB|E2RDC2 - symbol:HERC2 "Uncharacterized protein"... 209 9.8e-18 3
UNIPROTKB|O95714 - symbol:HERC2 "E3 ubiquitin-protein lig... 209 1.3e-17 3
RGD|1310971 - symbol:Herc4 "HECT and RLD domain containin... 213 1.6e-17 2
UNIPROTKB|D4ACN3 - symbol:Herc2 "Protein Herc2" species:1... 208 1.6e-17 3
MGI|MGI:103234 - symbol:Herc2 "hect (homologous to the E6... 208 1.7e-17 3
UNIPROTKB|Q5GLZ8 - symbol:HERC4 "Probable E3 ubiquitin-pr... 209 1.8e-17 2
RGD|1307803 - symbol:Herc3 "HECT and RLD domain containin... 211 2.1e-17 2
UNIPROTKB|E1C514 - symbol:HERC3 "Uncharacterized protein"... 232 2.4e-17 2
TAIR|locus:2086253 - symbol:AT3G23270 "AT3G23270" species... 220 3.2e-17 2
UNIPROTKB|F1NBC5 - symbol:HERC3 "Uncharacterized protein"... 232 3.8e-17 2
TAIR|locus:505006603 - symbol:AT5G12350 "AT5G12350" speci... 241 4.2e-17 1
UNIPROTKB|F1N1N9 - symbol:HERC5 "Uncharacterized protein"... 200 4.6e-17 2
UNIPROTKB|E2RFW5 - symbol:HERC4 "Uncharacterized protein"... 204 5.1e-17 2
UNIPROTKB|E2RFV1 - symbol:HERC4 "Uncharacterized protein"... 204 5.2e-17 2
UNIPROTKB|E1BAV2 - symbol:HERC4 "Uncharacterized protein"... 203 6.7e-17 2
UNIPROTKB|F1RW66 - symbol:HERC3 "Uncharacterized protein"... 207 7.0e-17 2
TAIR|locus:2165770 - symbol:AT5G42140 "AT5G42140" species... 238 8.7e-17 3
UNIPROTKB|E2RMB0 - symbol:HERC3 "Uncharacterized protein"... 207 9.3e-17 2
DICTYBASE|DDB_G0269934 - symbol:DDB_G0269934 "Ras GTPase ... 198 1.1e-16 2
UNIPROTKB|A2VDP7 - symbol:HERC3 "HERC3 protein" species:9... 203 1.1e-16 2
UNIPROTKB|Q15034 - symbol:HERC3 "Probable E3 ubiquitin-pr... 206 1.5e-16 2
UNIPROTKB|Q8IVU3 - symbol:HERC6 "Probable E3 ubiquitin-pr... 204 3.9e-16 2
RGD|1306366 - symbol:Herc1 "HECT and RLD domain containin... 179 5.1e-16 2
UNIPROTKB|Q9UII4 - symbol:HERC5 "E3 ISG15--protein ligase... 224 5.6e-16 2
TAIR|locus:2025277 - symbol:PRAF1 "AT1G76950" species:370... 237 6.5e-16 2
UNIPROTKB|F1NUG6 - symbol:Gga.50841 "Uncharacterized prot... 228 6.5e-16 1
UNIPROTKB|F1PB99 - symbol:HERC5 "Uncharacterized protein"... 229 8.8e-16 1
UNIPROTKB|F1NCH3 - symbol:HERC4 "Uncharacterized protein"... 198 9.7e-16 3
UNIPROTKB|E2R5W9 - symbol:RCCD1 "Uncharacterized protein"... 195 1.7e-15 2
UNIPROTKB|E1B8U7 - symbol:RCCD1 "Uncharacterized protein"... 198 1.9e-15 2
UNIPROTKB|E1BVG2 - symbol:RCBTB1 "Uncharacterized protein... 221 2.2e-15 1
TAIR|locus:2079147 - symbol:AT3G47660 "AT3G47660" species... 225 2.2e-15 1
MGI|MGI:1344037 - symbol:Rpgr "retinitis pigmentosa GTPas... 225 2.4e-15 1
UNIPROTKB|F1RMH6 - symbol:RCCD1 "Uncharacterized protein"... 194 2.5e-15 2
ZFIN|ZDB-GENE-040426-2216 - symbol:rcc1 "regulator of chr... 165 3.1e-15 2
UNIPROTKB|Q92834 - symbol:RPGR "X-linked retinitis pigmen... 222 5.4e-15 1
TAIR|locus:2092190 - symbol:AT3G26100 species:3702 "Arabi... 204 1.2e-14 3
UNIPROTKB|Q9N1T2 - symbol:RPGR "X-linked retinitis pigmen... 218 1.5e-14 1
RGD|1308467 - symbol:Rcbtb1 "regulator of chromosome cond... 212 2.3e-14 1
MGI|MGI:1918580 - symbol:Rcbtb1 "regulator of chromosome ... 212 2.3e-14 1
UNIPROTKB|F1PV11 - symbol:RCBTB1 "Uncharacterized protein... 212 2.3e-14 1
TAIR|locus:2144291 - symbol:AT5G11580 "AT5G11580" species... 172 2.4e-14 3
RGD|1306897 - symbol:Nek8 "NIMA-related kinase 8" species... 198 2.9e-14 2
UNIPROTKB|E1BKF7 - symbol:RCBTB1 "Uncharacterized protein... 210 3.9e-14 1
UNIPROTKB|Q8NDN9 - symbol:RCBTB1 "RCC1 and BTB domain-con... 210 3.9e-14 1
UNIPROTKB|I3LCV3 - symbol:RCBTB1 "Uncharacterized protein... 210 4.4e-14 1
UNIPROTKB|A7Z018 - symbol:RCC1 "Uncharacterized protein" ... 168 5.2e-14 2
UNIPROTKB|F1LPM8 - symbol:Herc6 "Protein Herc6" species:1... 179 5.4e-14 2
RGD|1561739 - symbol:Herc6 "HECT and RLD domain containin... 188 6.7e-14 2
MGI|MGI:1890646 - symbol:Nek8 "NIMA (never in mitosis gen... 196 7.8e-14 2
UNIPROTKB|A6NED2 - symbol:RCCD1 "RCC1 domain-containing p... 178 9.1e-14 2
UNIPROTKB|I3L5B6 - symbol:LOC100737658 "Uncharacterized p... 206 1.8e-13 1
ZFIN|ZDB-GENE-081015-2 - symbol:rpgrb "retinitis pigmento... 210 1.8e-13 1
TAIR|locus:2159295 - symbol:RUG3 "RCC1/UVR8/GEF-like 3" s... 177 2.1e-13 2
ZFIN|ZDB-GENE-030131-7951 - symbol:rcbtb1 "regulator of c... 202 3.1e-13 1
TAIR|locus:2076532 - symbol:AT3G02300 "AT3G02300" species... 182 3.8e-13 2
MGI|MGI:1914388 - symbol:Herc6 "hect domain and RLD 6" sp... 187 4.3e-13 2
ZFIN|ZDB-GENE-090311-56 - symbol:si:ch73-190m4.1 "si:ch73... 202 8.7e-13 1
ZFIN|ZDB-GENE-070615-14 - symbol:zgc:163136 "zgc:163136" ... 202 8.8e-13 1
MGI|MGI:1913989 - symbol:Rcc1 "regulator of chromosome co... 164 1.0e-12 2
DICTYBASE|DDB_G0276527 - symbol:DDB_G0276527 "putative bi... 175 1.5e-12 2
UNIPROTKB|P18754 - symbol:RCC1 "Regulator of chromosome c... 162 1.7e-12 2
ZFIN|ZDB-GENE-090311-16 - symbol:si:ch211-281g13.4 "si:ch... 205 1.8e-12 3
ZFIN|ZDB-GENE-090313-139 - symbol:herc3 "hect domain and ... 201 2.0e-12 3
UNIPROTKB|I3LT85 - symbol:RCC1 "Uncharacterized protein" ... 154 2.1e-12 2
UNIPROTKB|E2QZC2 - symbol:NEK8 "Uncharacterized protein" ... 185 2.3e-12 2
RGD|1592835 - symbol:Rcc1 "regulator of chromosome conden... 162 2.9e-12 2
UNIPROTKB|F1RNC5 - symbol:NEK8 "Uncharacterized protein" ... 184 2.9e-12 2
TAIR|locus:2009739 - symbol:AT1G65920 species:3702 "Arabi... 184 3.1e-12 2
WARNING: Descriptions of 113 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2099986 [details] [associations]
symbol:AT3G55580 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] INTERPRO:IPR000408 Pfam:PF00415
EMBL:CP002686 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AL132975
HSSP:P18754 IPI:IPI00521720 PIR:T47697 RefSeq:NP_191117.1
UniGene:At.35013 ProteinModelPortal:Q9M2S1 SMR:Q9M2S1 PRIDE:Q9M2S1
EnsemblPlants:AT3G55580.1 GeneID:824723 KEGG:ath:AT3G55580
TAIR:At3g55580 InParanoid:Q9M2S1 OMA:HPIPCIE PhylomeDB:Q9M2S1
ProtClustDB:CLSN2685056 Genevestigator:Q9M2S1 Uniprot:Q9M2S1
Length = 488
Score = 1536 (545.8 bits), Expect = 1.3e-157, P = 1.3e-157
Identities = 299/476 (62%), Positives = 345/476 (72%)
Query: 4 EGQEEKM--ERVVFMWGYLPGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAIS 61
E +EE++ +RVV+MWGYLPGA PQRSP++SP+ V++P V S+W+DV GGGCGFAMA +
Sbjct: 21 EKEEEEVVSQRVVYMWGYLPGASPQRSPLMSPVEVKIPPAVESSWKDVSGGGCGFAMATA 80
Query: 62 DSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYT 121
+S KLITWGSTDDLGQSYVTSGKHGE PEPFPLP E + KA AGWAHCVAVTE +VYT
Sbjct: 81 ESGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPPEVCVQKAEAGWAHCVAVTENQQVYT 140
Query: 122 WGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEXXXXXXXXXXXXXXXXXXXXXXXX 181
WGW+EC+P+GRVFG + D D ER SF TE
Sbjct: 141 WGWRECIPTGRVFGQV------DGDSCERNISFSTEQVSSSSQGKKSSGGTSSQVEGRGG 194
Query: 182 XXXXXXXXXISLAKQTAESSSSGDE-NLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIX 240
IS +KQ AE+SS D +LSA PCLV+L PGVRI +VAAGGRHTLALSDI
Sbjct: 195 GEPTKKRR-ISPSKQAAENSSQSDNIDLSALPCLVSLAPGVRIVSVAAGGRHTLALSDIG 253
Query: 241 XXXXXXXXXXXXXXXXSRIRMVSSPHPIPCIE-SSYGKDRSAALSRGSVNSEGPGFRVPG 299
SR+R+VSSPHPIPCIE SSYGK S+ ++ SV G RV G
Sbjct: 254 QVWGWGYGGEGQLGLGSRVRLVSSPHPIPCIEPSSYGKATSSGVNMSSVVQCG---RVLG 310
Query: 300 NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAA 359
+YVK IACGGRHSAVITD GALLTFGWGLYGQCGQGSTDDELSP CVSSLLGI+IE VAA
Sbjct: 311 SYVKKIACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIRIEEVAA 370
Query: 360 GLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
GLWHT C SSDGDVYA DQAETLP+LL+AP+LENV+ K++SCGARHTA
Sbjct: 371 GLWHTTCASSDGDVYAFGGNQFGQLGTGCDQAETLPKLLEAPNLENVNVKTISCGARHTA 430
Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAVP 475
VI D+G+VFCWGWNKYGQLG+GDVIDRN P++V I+ C P+N+ACGWWHTLLL P
Sbjct: 431 VITDEGRVFCWGWNKYGQLGIGDVIDRNAPAEVRIKDCFPKNIACGWWHTLLLGQP 486
>TAIR|locus:2163986 [details] [associations]
symbol:UVR8 "UVB-RESISTANCE 8" species:3702 "Arabidopsis
thaliana" [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=ISS]
[GO:0009411 "response to UV" evidence=IMP] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0010224 "response to UV-B"
evidence=IEP;IGI] [GO:0000785 "chromatin" evidence=IDA] [GO:0009649
"entrainment of circadian clock" evidence=IMP] [GO:0006007 "glucose
catabolic process" evidence=RCA] [GO:0042803 "protein
homodimerization activity" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005829 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009649 GO:GO:0000785 EMBL:AB007646
GO:GO:0003682 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0010224 eggNOG:COG5184 UniGene:At.49214
EMBL:AF130441 EMBL:AY125497 EMBL:BT000600 IPI:IPI00521473
PIR:T50662 RefSeq:NP_201191.1 PDB:4D9S PDB:4DNU PDB:4DNV PDB:4DNW
PDBsum:4D9S PDBsum:4DNU PDBsum:4DNV PDBsum:4DNW
ProteinModelPortal:Q9FN03 SMR:Q9FN03 DIP:DIP-59667N STRING:Q9FN03
PRIDE:Q9FN03 EnsemblPlants:AT5G63860.1 GeneID:836506
KEGG:ath:AT5G63860 TAIR:At5g63860 HOGENOM:HOG000240817
InParanoid:Q9FN03 OMA:GTLWCWG PhylomeDB:Q9FN03
ProtClustDB:CLSN2686209 Genevestigator:Q9FN03 Uniprot:Q9FN03
Length = 440
Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 63/205 (30%), Positives = 106/205 (51%)
Query: 271 IESSYGKDRSAALSRGSVNSE-GPG--FRVPGNYVKGIACGGRHSAVITDAGA-LLTFGW 326
I S+G+ L G P + G+ + + CG H+ + +G + ++GW
Sbjct: 35 IVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGW 94
Query: 327 GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXX 386
G +G+ G G++ D +P + +L GI+I+ +A G H + ++ +G+V +
Sbjct: 95 GDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGL 154
Query: 387 XXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR 446
+ +P+ + A E + K V+ GA HTA + +DG ++ WGW +YG LGLGD DR
Sbjct: 155 GDTEDSLVPQKIQA--FEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDR 212
Query: 447 NIPSQVTIEGCVPRN-VACGWWHTL 470
+P +VT G + VACGW HT+
Sbjct: 213 LVPERVTSTGGEKMSMVACGWRHTI 237
Score = 297 (109.6 bits), Expect = 7.7e-35, Sum P(3) = 7.7e-35
Identities = 68/201 (33%), Positives = 101/201 (50%)
Query: 274 SYGKDRSAALSRGSVNSEGPGFRVP---GNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
S+G++++ L G ++ G +K +A G H+A +T+ G L +GWG YG
Sbjct: 143 SWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYG 202
Query: 331 QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQ 390
G G D L P V+S G ++ VA G HTI +S G +Y +
Sbjct: 203 NLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLE 262
Query: 391 AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
+P L+A L N +S G RHT + DGK++ WGWNK+GQ+G+G+ +D+ P
Sbjct: 263 DHLIPHKLEA--LSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPV 320
Query: 451 QVTI-EGCVPRNVACGWWHTL 470
QV + V+CGW HTL
Sbjct: 321 QVRFPDDQKVVQVSCGWRHTL 341
Score = 253 (94.1 bits), Expect = 1.5e-28, Sum P(3) = 1.5e-28
Identities = 52/151 (34%), Positives = 78/151 (51%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
G + +ACG RH+ ++ +GAL T+GW YGQ G G +D L P+ + +L I ++
Sbjct: 223 GEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQIS 282
Query: 359 AGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
G HT+ ++SDG +Y + + P + P + V VSCG RHT
Sbjct: 283 GGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKV--VQVSCGWRHT 340
Query: 419 AVIADDGKVFCWGWNKYGQLGLGDVIDRNIP 449
+ + VF WG GQLG+G+ +DRN P
Sbjct: 341 LAVTERNNVFAWGRGTNGQLGIGESVDRNFP 371
Score = 214 (80.4 bits), Expect = 8.5e-15, P = 8.5e-15
Identities = 56/174 (32%), Positives = 79/174 (45%)
Query: 298 PGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGV 357
P V I+ G HS + + ++G G GQ G G +D SP +S+L G QI V
Sbjct: 13 PPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSV 72
Query: 358 AAGLWHTICISSDG-DVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGAR 416
G HT+ S G +VY+ P L +L + K ++CG
Sbjct: 73 TCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTP--LPIKALHGIRIKQIACGDS 130
Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
H + +G+V WG N+ GQLGLGD D +P ++ EG + VA G HT
Sbjct: 131 HCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHT 184
Score = 116 (45.9 bits), Expect = 6.1e-13, Sum P(3) = 6.1e-13
Identities = 26/112 (23%), Positives = 52/112 (46%)
Query: 300 NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAA 359
+++ I+ G RH+ +T G L +GW +GQ G G+ D+ SP V ++ V+
Sbjct: 276 SFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSC 335
Query: 360 GLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSV 411
G HT+ ++ +V+A P++++A S++ + +
Sbjct: 336 GWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALSVDGASGQHI 387
Score = 113 (44.8 bits), Expect = 2.1e-27, Sum P(2) = 2.1e-27
Identities = 42/144 (29%), Positives = 65/144 (45%)
Query: 14 VFMWGYLP-GALPQRSPILSPLVVRLPLTV--GSAWRDV-CGGGCGFAMAISDSRKLITW 69
V+ WG+ G L + S L LP+ G + + CG +A++ ++ +W
Sbjct: 89 VYSWGWGDFGRLGHGNS--SDLFTPLPIKALHGIRIKQIACGDS--HCLAVTMEGEVQSW 144
Query: 70 GSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVP 129
G + GQ + + +P+ I AAG H AVTE G++Y WGW
Sbjct: 145 GRNQN-GQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGW----- 198
Query: 130 SGRVFGDLSTGTGLDKDVFERQSS 153
GR +G+L G D+ V ER +S
Sbjct: 199 -GR-YGNLGLGDRTDRLVPERVTS 220
Score = 93 (37.8 bits), Expect = 7.7e-35, Sum P(3) = 7.7e-35
Identities = 35/107 (32%), Positives = 49/107 (45%)
Query: 49 VCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEAS------IVK 102
+ G ++A+ + +WG +D GQ G HG+ E P PT+ S IV
Sbjct: 19 IISAGASHSVALLSGDIVCSWGRGED-GQL----G-HGDA-EDRPSPTQLSALDGHQIVS 71
Query: 103 AAAGWAHCVAVTEGG-EVYTWGWKECVPSGRVFGDLSTGTGLDKDVF 148
G H VA ++ G EVY+WGW + FG L G G D+F
Sbjct: 72 VTCGADHTVAYSQSGMEVYSWGWGD-------FGRL--GHGNSSDLF 109
Score = 62 (26.9 bits), Expect = 1.5e-28, Sum P(3) = 1.5e-28
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSD 238
GD S P + G+RI VAAG HT A+++
Sbjct: 155 GDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTE 189
Score = 56 (24.8 bits), Expect = 6.1e-13, Sum P(3) = 6.1e-13
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS 237
GD P VT G +++ VA G RHT+++S
Sbjct: 207 GDRTDRLVPERVTSTGGEKMSMVACGWRHTISVS 240
Score = 44 (20.5 bits), Expect = 7.7e-35, Sum P(3) = 7.7e-35
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 220 GVRIATVAAGGRHTLALS 237
G+RI +A G H LA++
Sbjct: 119 GIRIKQIACGDSHCLAVT 136
Score = 44 (20.5 bits), Expect = 0.0010, Sum P(2) = 0.0010
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSD 238
P V ++ V+ G RHTLA+++
Sbjct: 319 PVQVRFPDDQKVVQVSCGWRHTLAVTE 345
Score = 42 (19.8 bits), Expect = 5.1e-27, Sum P(2) = 5.1e-27
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS 237
GD P ++ G +I +V G HT+A S
Sbjct: 50 GDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYS 83
>RGD|1309901 [details] [associations]
symbol:Rccd1 "RCC1 domain containing 1" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0005886
"plasma membrane" evidence=IEA;ISO] RGD:1309901 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 CTD:91433
OrthoDB:EOG41NTMF GeneTree:ENSGT00700000104312 IPI:IPI00391295
RefSeq:XP_218819.5 UniGene:Rn.225183 Ensembl:ENSRNOT00000029471
GeneID:308760 KEGG:rno:308760 UCSC:RGD:1309901 NextBio:659480
Uniprot:D3ZG92
Length = 378
Score = 169 (64.5 bits), Expect = 7.3e-26, Sum P(3) = 7.3e-26
Identities = 28/73 (38%), Positives = 48/73 (65%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
V+ + G H+ ++ +AG + ++G G +GQ G GS + EL P + +L G+++ VAAG
Sbjct: 163 VRQLQLGAEHALLLCEAGQVFSWGGGRHGQLGHGSLEAELEPRLLEALQGLRMAEVAAGG 222
Query: 362 WHTICISSDGDVY 374
WH++C+S GD+Y
Sbjct: 223 WHSVCVSETGDIY 235
Score = 158 (60.7 bits), Expect = 7.3e-26, Sum P(3) = 7.3e-26
Identities = 37/86 (43%), Positives = 51/86 (59%)
Query: 392 ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
+ P LLD P L + K+ SCG+RHTAV+ G+++ WGW KYGQLG D + P +
Sbjct: 290 QPFPALLDLP-LGSDAVKA-SCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSSDQPCR 347
Query: 452 VT--IEGCVP-RNVACGWWHTLLLAV 474
V +E + R V CG W+T + AV
Sbjct: 348 VEYFVERQLEVRAVTCGPWNTYVYAV 373
Score = 122 (48.0 bits), Expect = 8.5e-08, Sum P(2) = 8.5e-08
Identities = 26/98 (26%), Positives = 46/98 (46%)
Query: 343 PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPS 402
P C +++ + G H + + G V++ +AE PRLL+A
Sbjct: 152 PFCQPLAPELRVRQLQLGAEHALLLCEAGQVFSWGGGRHGQLGHGSLEAELEPRLLEA-- 209
Query: 403 LENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL 440
L+ + V+ G H+ +++ G ++ WGWN+ GQL L
Sbjct: 210 LQGLRMAEVAAGGWHSVCVSETGDIYIWGWNESGQLAL 247
Score = 120 (47.3 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 25/61 (40%), Positives = 33/61 (54%)
Query: 306 ACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE--GVAAGLWH 363
+CG RH+AV+T G L T+GWG YGQ G + P V + Q+E V G W+
Sbjct: 308 SCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSSDQPCRVEYFVERQLEVRAVTCGPWN 367
Query: 364 T 364
T
Sbjct: 368 T 368
Score = 106 (42.4 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 21/74 (28%), Positives = 38/74 (51%)
Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVP 459
P + + + GA H ++ + G+VF WG ++GQLG G + P + ++G
Sbjct: 156 PLAPELRVRQLQLGAEHALLLCEAGQVFSWGGGRHGQLGHGSLEAELEPRLLEALQGLRM 215
Query: 460 RNVACGWWHTLLLA 473
VA G WH++ ++
Sbjct: 216 AEVAAGGWHSVCVS 229
Score = 102 (41.0 bits), Expect = 4.9e-15, Sum P(2) = 4.9e-15
Identities = 29/107 (27%), Positives = 51/107 (47%)
Query: 53 GCGFAMAISDSRKLITWGST--DDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
G A+ + ++ ++ +WG LG + + + E A + AA GW H
Sbjct: 169 GAEHALLLCEAGQVFSWGGGRHGQLGHGSLEAELEPRLLEALQGLRMAEV--AAGGW-HS 225
Query: 111 VAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTE 157
V V+E G++Y WGW E SG++ L T +G +K +++ L +
Sbjct: 226 VCVSETGDIYIWGWNE---SGQLA--LPTRSGTEKKTVREEATELND 267
Score = 75 (31.5 bits), Expect = 5.6e-16, Sum P(3) = 5.6e-16
Identities = 19/61 (31%), Positives = 30/61 (49%)
Query: 274 SYGKDRSAALSRGSVNSE-GPGF--RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
S+G R L GS+ +E P + G + +A GG HS +++ G + +GW G
Sbjct: 184 SWGGGRHGQLGHGSLEAELEPRLLEALQGLRMAEVAAGGWHSVCVSETGDIYIWGWNESG 243
Query: 331 Q 331
Q
Sbjct: 244 Q 244
Score = 72 (30.4 bits), Expect = 7.3e-26, Sum P(3) = 7.3e-26
Identities = 15/50 (30%), Positives = 23/50 (46%)
Query: 82 SGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSG 131
+G+H + P PL + + +A W++ VT GG V G C G
Sbjct: 25 NGQHA-VHSPEPLHAADDVCQVSASWSYTALVTRGGRVELSGSVSCAADG 73
Score = 60 (26.2 bits), Expect = 9.4e-15, Sum P(3) = 9.4e-15
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 91 PF--PLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
PF PL E + + G H + + E G+V++WG
Sbjct: 152 PFCQPLAPELRVRQLQLGAEHALLLCEAGQVFSWG 186
Score = 57 (25.1 bits), Expect = 3.8e-14, Sum P(3) = 3.8e-14
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSD 238
P L+ G+R+A VAAGG H++ +S+
Sbjct: 204 PRLLEALQGLRMAEVAAGGWHSVCVSE 230
>MGI|MGI:2444156 [details] [associations]
symbol:Rccd1 "RCC1 domain containing 1" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] MGI:MGI:2444156
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005886 GO:GO:0005737
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 CTD:91433 HOGENOM:HOG000154085 HOVERGEN:HBG061852
OMA:ERPGAWF OrthoDB:EOG41NTMF EMBL:AK030872 EMBL:AK084219
EMBL:AK088662 EMBL:BC069844 IPI:IPI00881984 IPI:IPI00896067
RefSeq:NP_775621.2 UniGene:Mm.474502 ProteinModelPortal:Q8BTU7
SMR:Q8BTU7 PhosphoSite:Q8BTU7 PRIDE:Q8BTU7
Ensembl:ENSMUST00000047362 Ensembl:ENSMUST00000121882 GeneID:269955
KEGG:mmu:269955 UCSC:uc009ial.2 GeneTree:ENSGT00700000104312
InParanoid:Q8BTU7 NextBio:393123 Bgee:Q8BTU7 Genevestigator:Q8BTU7
Uniprot:Q8BTU7
Length = 377
Score = 163 (62.4 bits), Expect = 5.2e-25, Sum P(3) = 5.2e-25
Identities = 36/108 (33%), Positives = 57/108 (52%)
Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFR--VPGNYVKGIACGGRHSAVITDAGALLTFGW 326
P ES G +R V E P + P V+ + G H ++ AG + ++G
Sbjct: 128 PSRESRMGTLPLLPCARAYVTPEPPFCQPLAPELRVRQLELGAEHVLLLCAAGQVFSWGA 187
Query: 327 GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVY 374
G +GQ G G+ + EL P + +L G+++ VAAG WH++C+S GD+Y
Sbjct: 188 GRHGQLGHGTLEAELEPRLLEALQGLRMAKVAAGGWHSVCLSETGDIY 235
Score = 151 (58.2 bits), Expect = 5.2e-25, Sum P(3) = 5.2e-25
Identities = 34/86 (39%), Positives = 49/86 (56%)
Query: 392 ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDV--IDRNIP 449
+ P LLD P + + SCG+RHTAV+ G+++ WGW KYGQLG D +DR
Sbjct: 289 QPFPALLDLPLGSD--AVMASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSLDRPCC 346
Query: 450 SQVTIEGCVP-RNVACGWWHTLLLAV 474
+ +E + R V CG W+T + A+
Sbjct: 347 VEYFVERQLEVRAVTCGPWNTYVYAM 372
Score = 131 (51.2 bits), Expect = 7.5e-12, Sum P(3) = 7.5e-12
Identities = 27/69 (39%), Positives = 37/69 (53%)
Query: 306 ACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE--GVAAGLWH 363
+CG RH+AV+T G L T+GWG YGQ G + P CV + Q+E V G W+
Sbjct: 307 SCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSLDRPCCVEYFVERQLEVRAVTCGPWN 366
Query: 364 TICISSDGD 372
T + + D
Sbjct: 367 TYVYAMERD 375
Score = 124 (48.7 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 28/109 (25%), Positives = 50/109 (45%)
Query: 332 CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQA 391
C + E P C +++ + G H + + + G V++ +A
Sbjct: 142 CARAYVTPE-PPFCQPLAPELRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEA 200
Query: 392 ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL 440
E PRLL+A L+ + V+ G H+ +++ G ++ WGWN+ GQL L
Sbjct: 201 ELEPRLLEA--LQGLRMAKVAAGGWHSVCLSETGDIYIWGWNESGQLAL 247
Score = 103 (41.3 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 22/74 (29%), Positives = 37/74 (50%)
Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVP 459
P + + + GA H ++ G+VF WG ++GQLG G + P + ++G
Sbjct: 156 PLAPELRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEPRLLEALQGLRM 215
Query: 460 RNVACGWWHTLLLA 473
VA G WH++ L+
Sbjct: 216 AKVAAGGWHSVCLS 229
Score = 88 (36.0 bits), Expect = 9.1e-13, Sum P(2) = 9.1e-13
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 103 AAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTE 157
AA GW H V ++E G++Y WGW E SG++ L T +G + +++ L E
Sbjct: 219 AAGGW-HSVCLSETGDIYIWGWNE---SGQLA--LPTRSGTENKAEREEATELNE 267
Score = 78 (32.5 bits), Expect = 5.2e-25, Sum P(3) = 5.2e-25
Identities = 15/44 (34%), Positives = 22/44 (50%)
Query: 76 GQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEV 119
GQ+ + H + P PL I + +AGW++ VT GG V
Sbjct: 18 GQALGSGNSHHSVYSPEPLHASDDICQVSAGWSYTALVTRGGRV 61
Score = 72 (30.4 bits), Expect = 1.9e-15, Sum P(3) = 1.9e-15
Identities = 18/61 (29%), Positives = 30/61 (49%)
Query: 274 SYGKDRSAALSRGSVNSE-GPGF--RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
S+G R L G++ +E P + G + +A GG HS +++ G + +GW G
Sbjct: 184 SWGAGRHGQLGHGTLEAELEPRLLEALQGLRMAKVAAGGWHSVCLSETGDIYIWGWNESG 243
Query: 331 Q 331
Q
Sbjct: 244 Q 244
Score = 60 (26.2 bits), Expect = 3.2e-14, Sum P(3) = 3.2e-14
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSD 238
P L+ G+R+A VAAGG H++ LS+
Sbjct: 204 PRLLEALQGLRMAKVAAGGWHSVCLSE 230
Score = 58 (25.5 bits), Expect = 3.5e-12, Sum P(3) = 3.5e-12
Identities = 19/56 (33%), Positives = 27/56 (48%)
Query: 89 PEP-F--PLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGT 141
PEP F PL E + + G H + + G+V++WG +GR G L GT
Sbjct: 149 PEPPFCQPLAPELRVRQLELGAEHVLLLCAAGQVFSWG------AGR-HGQLGHGT 197
>UNIPROTKB|G3V2I3 [details] [associations]
symbol:RCCD1 "RCC1 domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 EMBL:AC068831 HGNC:HGNC:30457
ProteinModelPortal:G3V2I3 SMR:G3V2I3 Ensembl:ENST00000555155
ArrayExpress:G3V2I3 Bgee:G3V2I3 Uniprot:G3V2I3
Length = 374
Score = 168 (64.2 bits), Expect = 9.9e-25, Sum P(3) = 9.9e-25
Identities = 34/108 (31%), Positives = 58/108 (53%)
Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFR--VPGNYVKGIACGGRHSAVITDAGALLTFGW 326
P E+ G+ +R V+ P +R P + + G H+ ++ AG + ++G
Sbjct: 125 PAGEAQAGRLPLLPCARAYVSPRAPFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGG 184
Query: 327 GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVY 374
G +GQ G G+ + EL P + +L G+ + VAAG WH++C+S GD+Y
Sbjct: 185 GRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIY 232
Score = 153 (58.9 bits), Expect = 9.9e-25, Sum P(3) = 9.9e-25
Identities = 33/86 (38%), Positives = 47/86 (54%)
Query: 392 ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
+ P LLD P + + SCG+RHTAV+ G+++ WGW KYGQLG D + P +
Sbjct: 286 QPFPALLDLPMGSD--AVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRR 343
Query: 452 VTI---EGCVPRNVACGWWHTLLLAV 474
V + + V CG W+T + AV
Sbjct: 344 VEYFVDKQLQVKAVTCGPWNTYVYAV 369
Score = 126 (49.4 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 25/61 (40%), Positives = 34/61 (55%)
Query: 306 ACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG--IQIEGVAAGLWH 363
+CG RH+AV+T G L T+GWG YGQ G T P V + +Q++ V G W+
Sbjct: 304 SCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYFVDKQLQVKAVTCGPWN 363
Query: 364 T 364
T
Sbjct: 364 T 364
Score = 116 (45.9 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 24/81 (29%), Positives = 41/81 (50%)
Query: 360 GLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
G H + + + G V++ +AE PRLL+A L+ + V+ G H+
Sbjct: 166 GAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEA--LQGLVMAEVAAGGWHSV 223
Query: 420 VIADDGKVFCWGWNKYGQLGL 440
+++ G ++ WGWN+ GQL L
Sbjct: 224 CVSETGDIYIWGWNESGQLAL 244
Score = 109 (43.4 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 22/74 (29%), Positives = 39/74 (52%)
Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVP 459
P + ++ + GA H ++ G+VF WG ++GQLG G + P + ++G V
Sbjct: 153 PLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVM 212
Query: 460 RNVACGWWHTLLLA 473
VA G WH++ ++
Sbjct: 213 AEVAAGGWHSVCVS 226
Score = 90 (36.7 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
Identities = 22/76 (28%), Positives = 35/76 (46%)
Query: 53 GCGFAMAISDSRKLITWGST--DDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
G A+ + + ++ +WG LG + + + E A + AA GW H
Sbjct: 166 GAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEV--AAGGW-HS 222
Query: 111 VAVTEGGEVYTWGWKE 126
V V+E G++Y WGW E
Sbjct: 223 VCVSETGDIYIWGWNE 238
Score = 73 (30.8 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 18/61 (29%), Positives = 30/61 (49%)
Query: 274 SYGKDRSAALSRGSVNSE-GPGF--RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
S+G R L G++ +E P + G + +A GG HS +++ G + +GW G
Sbjct: 181 SWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESG 240
Query: 331 Q 331
Q
Sbjct: 241 Q 241
Score = 67 (28.6 bits), Expect = 9.9e-25, Sum P(3) = 9.9e-25
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 76 GQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEV 119
GQ + SG+ ++ P PL I + +A W++ VT GG +
Sbjct: 18 GQE-LGSGRGRQVHSPSPLRAGVDICRVSASWSYTAFVTRGGRL 60
Score = 51 (23.0 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 17/53 (32%), Positives = 23/53 (43%)
Query: 91 PF--PLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGT 141
PF PL E + G H + + G+V++WG GR G L GT
Sbjct: 149 PFYRPLAPELRARQLELGAEHALLLDAAGQVFSWG------GGR-HGQLGHGT 194
>UNIPROTKB|F1MNS0 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016567
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
OMA:HHYQDGI GeneTree:ENSGT00700000104312 EMBL:DAAA02028744
EMBL:DAAA02028745 EMBL:DAAA02028746 IPI:IPI00924381
Ensembl:ENSBTAT00000061038 ArrayExpress:F1MNS0 Uniprot:F1MNS0
Length = 4857
Score = 253 (94.1 bits), Expect = 1.2e-23, Sum P(3) = 1.2e-23
Identities = 64/177 (36%), Positives = 95/177 (53%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
G V ++CG +HSAV+T G L TFG G YG+ G G+T ++ P V++L G QI VA
Sbjct: 4128 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVA 4187
Query: 359 AGLWHTICISSDGD-VYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARH 417
GL HT+ +S+DG V+A A++ P+ +D L + K V+CG +
Sbjct: 4188 CGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDV--LCGIGIKKVACGTQF 4245
Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACGWWHTLLLA 473
+ + DG V+ +G ++ L G + N P Q+ + G V +VA G HTL LA
Sbjct: 4246 SVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALA 4302
Score = 238 (88.8 bits), Expect = 8.5e-22, Sum P(3) = 8.5e-22
Identities = 60/203 (29%), Positives = 99/203 (48%)
Query: 275 YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
+G R L+ N P + + + CG + VI G +L G G YG+ GQ
Sbjct: 3997 WGAGRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQ 4056
Query: 335 GSTDDELSPNCVSSLLGIQIEGVAAGLW---HTICISSDGDVYAXXXXXXXXXXXXXDQA 391
G++DD +S+L G + + H++ ++ G+V++
Sbjct: 4057 GNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDR 4116
Query: 392 ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
+ PR ++A E V +SCG +H+AV+ DGK+F +G YG+LGLG+ ++ +P +
Sbjct: 4117 QRRPRQIEALQGEEV--VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPER 4174
Query: 452 VT-IEGCVPRNVACGWWHTLLLA 473
VT +EG VACG HTL ++
Sbjct: 4175 VTALEGYQIGQVACGLNHTLAVS 4197
Score = 230 (86.0 bits), Expect = 7.9e-21, Sum P(3) = 7.9e-21
Identities = 64/208 (30%), Positives = 96/208 (46%)
Query: 274 SYGKDRSAALSRGSVNSEGPGFRVP---GNYVKGIACGGRHS-AVITDAGALLTFGWGLY 329
++G L G+ +++ RV G + +ACG H+ AV D + FG G Y
Sbjct: 4152 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 4211
Query: 330 GQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXD 389
G+ G G++ + SP V L GI I+ VA G ++ ++ DG VY
Sbjct: 4212 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4271
Query: 390 QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIP 449
+ P+ + P L V + V+ GA HT +A G V+ WG N GQLGLG P
Sbjct: 4272 RNHNRPQQI--PVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREP 4329
Query: 450 SQVTI-EGCVPRNVACGWWHTLLLAVPP 476
+ VT+ +G R ++ G H+ PP
Sbjct: 4330 TLVTVLQGKNVRQISAGRCHSAAWTAPP 4357
Score = 179 (68.1 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
Identities = 48/172 (27%), Positives = 86/172 (50%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW-- 362
I G + VI+ G++ G G YG+ G G ++++ + ++ I+ V++
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSD 467
Query: 363 -HTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
HT+ +++G+V++ + P+L+ P L+ VS G RH+A +
Sbjct: 468 GHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCVSAGYRHSAAV 526
Query: 422 ADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
+DG+++ WG +G+LG GD RNIP+ V V V+CG HT+ L+
Sbjct: 527 TEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGE-VSCGSSHTIALS 577
Score = 178 (67.7 bits), Expect = 6.6e-15, Sum P(2) = 6.6e-15
Identities = 55/208 (26%), Positives = 94/208 (45%)
Query: 274 SYGKDRSAALSRGSVNSEG-PGFRVPGNYVKGIACGGRHSAVIT-DAGALLTFGWGLYGQ 331
++G+ L G NS P + V ++CG H+ ++ D + +FG G G+
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 332 CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQA 391
G G T+ P + +L G+ I V AG ++ ++S G VYA +A
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS--EA 651
Query: 392 ETL-PRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR-NIP 449
L P+L++ L +S G H ++ D +V+ WG N GQ G G+ P
Sbjct: 652 TALRPKLIE--ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKP 709
Query: 450 SQVT-IEGCVPRNVACGWWHTLL-LAVP 475
+V+ ++G + ++ G H+L A+P
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLAWTALP 737
Score = 149 (57.5 bits), Expect = 0.00033, Sum P(3) = 0.00033
Identities = 39/142 (27%), Positives = 69/142 (48%)
Query: 291 EGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLL 350
+GP + G V ++ G RHSA +T+ G L T+G G +G+ G G ++ P V +
Sbjct: 505 QGP---LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS 561
Query: 351 GIQIEGVAAGLWHTICISSDG-DVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSK 409
+ E V+ G HTI +S DG V++ P++++A L+ + +
Sbjct: 562 NVG-E-VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEA--LQGMFIR 617
Query: 410 SVSCGARHTAVIADDGKVFCWG 431
V G++ + + G+V+ WG
Sbjct: 618 KVCAGSQSSLALTSTGQVYAWG 639
Score = 107 (42.7 bits), Expect = 1.2e-23, Sum P(3) = 1.2e-23
Identities = 25/74 (33%), Positives = 41/74 (55%)
Query: 52 GGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAH 109
G G +A + ++ +WG D LG ++ K+ ++ + PL + +V +AG+ H
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQG-PLQGKV-VVCVSAGYRH 522
Query: 110 CVAVTEGGEVYTWG 123
AVTE GE+YTWG
Sbjct: 523 SAAVTEDGELYTWG 536
Score = 84 (34.6 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
Identities = 26/101 (25%), Positives = 47/101 (46%)
Query: 50 CGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAH 109
CG G +MA+++S ++ +WG D G+ + P +V+ + G+ H
Sbjct: 4083 CGSD-GHSMALTESGEVFSWGD-GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKH 4140
Query: 110 CVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFER 150
VT G+++T+G +G +G L G +K + ER
Sbjct: 4141 SAVVTSDGKLFTFG------NGD-YGRLGLGNTSNKKLPER 4174
Score = 81 (33.6 bits), Expect = 5.9e-20, Sum P(3) = 5.9e-20
Identities = 22/77 (28%), Positives = 36/77 (46%)
Query: 47 RDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAG 106
R VC G ++A++ + ++ WG LG +S P+ IV + G
Sbjct: 617 RKVCAGSQS-SLALTSTGQVYAWGCGACLGCG--SSEATALRPKLIEELAATRIVDISIG 673
Query: 107 WAHCVAVTEGGEVYTWG 123
+HC+A++ EVY WG
Sbjct: 674 DSHCLALSHDNEVYAWG 690
Score = 73 (30.8 bits), Expect = 6.0e-20, Sum P(2) = 6.0e-20
Identities = 27/112 (24%), Positives = 45/112 (40%)
Query: 14 VFMWGY-LPGALPQRSP-ILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGS 71
V++WG G L + ++ P P + A + +CG C F + + + GS
Sbjct: 3994 VYLWGAGRHGQLAEAGRNVMVPAAA--P-SFSQAQQVICGQNCTFVIQANGTVLACGEGS 4050
Query: 72 TDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
LGQ + +V + H +A+TE GEV++WG
Sbjct: 4051 YGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWG 4102
Score = 69 (29.3 bits), Expect = 3.9e-19, Sum P(3) = 3.9e-19
Identities = 27/87 (31%), Positives = 40/87 (45%)
Query: 50 CGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPF-PLPTEAS----IVKAA 104
CG A++ D R + ++G D+ G+ G HG+ + P EA I K
Sbjct: 568 CGSSHTIALS-KDGRTVWSFGGGDN-GKL----G-HGDTNRVYKPKVIEALQGMFIRKVC 620
Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSG 131
AG +A+T G+VY WG C+ G
Sbjct: 621 AGSQSSLALTSTGQVYAWGCGACLGCG 647
Score = 59 (25.8 bits), Expect = 2.6e-18, Sum P(3) = 2.6e-18
Identities = 29/118 (24%), Positives = 53/118 (44%)
Query: 11 ERVVFMWG---YLPGALPQRSPILSPLVVRLPLTVGSAWRDVC-GGGCGFAMAISDSRKL 66
E VF WG Y S P +++ PL G VC G + A+++ +L
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQ-GKVV--VCVSAGYRHSAAVTEDGEL 532
Query: 67 ITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGE-VYTWG 123
TWG D G+ + G P + +++ + + G +H +A+++ G V+++G
Sbjct: 533 YTWGE-GDFGR--LGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFG 587
Score = 48 (22.0 bits), Expect = 1.2e-23, Sum P(3) = 1.2e-23
Identities = 13/34 (38%), Positives = 16/34 (47%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS 237
GD N P LV + V+ G HT+ALS
Sbjct: 546 GDSNSRNIPTLV--KDISNVGEVSCGSSHTIALS 577
Score = 44 (20.5 bits), Expect = 3.0e-23, Sum P(3) = 3.0e-23
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS 237
GD N P ++ G+ I V AG + +LAL+
Sbjct: 597 GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630
Score = 43 (20.2 bits), Expect = 0.00033, Sum P(3) = 0.00033
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 436 GQLGLGDVIDRNIPSQVTIEGCVPRNVA--CGWW 467
G LGL +V+D + + +E C ++V+ C W
Sbjct: 3552 GSLGLIEVVDVSTMHRRELEHCYRKDVSVTCIAW 3585
Score = 42 (19.8 bits), Expect = 4.8e-23, Sum P(3) = 4.8e-23
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 204 GDENLSAF-PCLVTLNPGVRIATVAAGGRHTLALS 237
G +A P L+ RI ++ G H LALS
Sbjct: 647 GSSEATALRPKLIEELAATRIVDISIGDSHCLALS 681
Score = 42 (19.8 bits), Expect = 5.8e-16, Sum P(3) = 5.8e-16
Identities = 11/37 (29%), Positives = 21/37 (56%)
Query: 204 GDENLSAFPCLVTLNP--GVRIATVAAGGRHTLALSD 238
G+ + +P L+ P G + V+AG RH+ A+++
Sbjct: 493 GNSSTQKYPKLIQ-GPLQGKVVVCVSAGYRHSAAVTE 528
Score = 39 (18.8 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 6/19 (31%), Positives = 7/19 (36%)
Query: 109 HCVAVTEGGEVYTWGWKEC 127
HC+ W W EC
Sbjct: 3906 HCLPDPASWNPNEWAWLEC 3924
Score = 39 (18.8 bits), Expect = 0.00081, Sum P(3) = 0.00081
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 427 VFCWGWNKYGQL 438
V+ WG ++GQL
Sbjct: 3994 VYLWGAGRHGQL 4005
Score = 38 (18.4 bits), Expect = 1.2e-22, Sum P(3) = 1.2e-22
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 220 GVRIATVAAGGRHTLA 235
G+ I ++AG H+LA
Sbjct: 717 GIAIQQISAGTSHSLA 732
Score = 38 (18.4 bits), Expect = 1.4e-16, Sum P(3) = 1.4e-16
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 113 VTEGGEVYTWG 123
V+E EVY WG
Sbjct: 368 VSETCEVYVWG 378
>UNIPROTKB|F1S098 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016567
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
CTD:8925 KO:K10594 OMA:HHYQDGI GeneTree:ENSGT00700000104312
EMBL:CU550694 EMBL:CU582937 RefSeq:XP_001927286.4 UniGene:Ssc.96208
UniGene:Ssc.97542 Ensembl:ENSSSCT00000005038 GeneID:100153537
KEGG:ssc:100153537 Uniprot:F1S098
Length = 4859
Score = 253 (94.1 bits), Expect = 1.2e-23, Sum P(3) = 1.2e-23
Identities = 64/177 (36%), Positives = 95/177 (53%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
G V ++CG +HSAV+T G L TFG G YG+ G G+T ++ P V++L G QI VA
Sbjct: 4131 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVA 4190
Query: 359 AGLWHTICISSDGD-VYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARH 417
GL HT+ +S+DG V+A A++ P+ +D L + K V+CG +
Sbjct: 4191 CGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDV--LCGIGIKKVACGTQF 4248
Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACGWWHTLLLA 473
+ + DG V+ +G ++ L G + N P Q+ + G V +VA G HTL LA
Sbjct: 4249 SVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALA 4305
Score = 238 (88.8 bits), Expect = 8.5e-22, Sum P(3) = 8.5e-22
Identities = 60/203 (29%), Positives = 99/203 (48%)
Query: 275 YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
+G R L+ N P + + + CG + VI G +L G G YG+ GQ
Sbjct: 4000 WGAGRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQ 4059
Query: 335 GSTDDELSPNCVSSLLGIQIEGVAAGLW---HTICISSDGDVYAXXXXXXXXXXXXXDQA 391
G++DD +S+L G + + H++ ++ G+V++
Sbjct: 4060 GNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDR 4119
Query: 392 ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
+ PR ++A E V +SCG +H+AV+ DGK+F +G YG+LGLG+ ++ +P +
Sbjct: 4120 QRRPRQIEALQGEEV--VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPER 4177
Query: 452 VT-IEGCVPRNVACGWWHTLLLA 473
VT +EG VACG HTL ++
Sbjct: 4178 VTALEGYQIGQVACGLNHTLAVS 4200
Score = 230 (86.0 bits), Expect = 7.9e-21, Sum P(3) = 7.9e-21
Identities = 64/208 (30%), Positives = 96/208 (46%)
Query: 274 SYGKDRSAALSRGSVNSEGPGFRVP---GNYVKGIACGGRHS-AVITDAGALLTFGWGLY 329
++G L G+ +++ RV G + +ACG H+ AV D + FG G Y
Sbjct: 4155 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 4214
Query: 330 GQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXD 389
G+ G G++ + SP V L GI I+ VA G ++ ++ DG VY
Sbjct: 4215 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4274
Query: 390 QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIP 449
+ P+ + P L V + V+ GA HT +A G V+ WG N GQLGLG P
Sbjct: 4275 RNHNRPQQI--PVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREP 4332
Query: 450 SQVTI-EGCVPRNVACGWWHTLLLAVPP 476
+ VT+ +G R ++ G H+ PP
Sbjct: 4333 TLVTVLQGKNVRQISAGRCHSAAWTAPP 4360
Score = 179 (68.1 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
Identities = 48/172 (27%), Positives = 86/172 (50%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW-- 362
I G + VI+ G++ G G YG+ G G ++++ + ++ I+ V++
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSD 467
Query: 363 -HTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
HT+ +++G+V++ + P+L+ P L+ VS G RH+A +
Sbjct: 468 GHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCVSAGYRHSAAV 526
Query: 422 ADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
+DG+++ WG +G+LG GD RNIP+ V V V+CG HT+ L+
Sbjct: 527 TEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGE-VSCGSSHTIALS 577
Score = 178 (67.7 bits), Expect = 6.6e-15, Sum P(2) = 6.6e-15
Identities = 55/208 (26%), Positives = 94/208 (45%)
Query: 274 SYGKDRSAALSRGSVNSEG-PGFRVPGNYVKGIACGGRHSAVIT-DAGALLTFGWGLYGQ 331
++G+ L G NS P + V ++CG H+ ++ D + +FG G G+
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 332 CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQA 391
G G T+ P + +L G+ I V AG ++ ++S G VYA +A
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS--EA 651
Query: 392 ETL-PRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR-NIP 449
L P+L++ L +S G H ++ D +V+ WG N GQ G G+ P
Sbjct: 652 TALRPKLIE--ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKP 709
Query: 450 SQVT-IEGCVPRNVACGWWHTLL-LAVP 475
+V+ ++G + ++ G H+L A+P
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLAWTALP 737
Score = 149 (57.5 bits), Expect = 0.00033, Sum P(3) = 0.00033
Identities = 39/142 (27%), Positives = 69/142 (48%)
Query: 291 EGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLL 350
+GP + G V ++ G RHSA +T+ G L T+G G +G+ G G ++ P V +
Sbjct: 505 QGP---LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS 561
Query: 351 GIQIEGVAAGLWHTICISSDG-DVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSK 409
+ E V+ G HTI +S DG V++ P++++A L+ + +
Sbjct: 562 NVG-E-VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEA--LQGMFIR 617
Query: 410 SVSCGARHTAVIADDGKVFCWG 431
V G++ + + G+V+ WG
Sbjct: 618 KVCAGSQSSLALTSTGQVYAWG 639
Score = 107 (42.7 bits), Expect = 1.2e-23, Sum P(3) = 1.2e-23
Identities = 25/74 (33%), Positives = 41/74 (55%)
Query: 52 GGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAH 109
G G +A + ++ +WG D LG ++ K+ ++ + PL + +V +AG+ H
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQG-PLQGKV-VVCVSAGYRH 522
Query: 110 CVAVTEGGEVYTWG 123
AVTE GE+YTWG
Sbjct: 523 SAAVTEDGELYTWG 536
Score = 84 (34.6 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
Identities = 26/101 (25%), Positives = 47/101 (46%)
Query: 50 CGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAH 109
CG G +MA+++S ++ +WG D G+ + P +V+ + G+ H
Sbjct: 4086 CGSD-GHSMALTESGEVFSWGD-GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKH 4143
Query: 110 CVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFER 150
VT G+++T+G +G +G L G +K + ER
Sbjct: 4144 SAVVTSDGKLFTFG------NGD-YGRLGLGNTSNKKLPER 4177
Score = 81 (33.6 bits), Expect = 5.9e-20, Sum P(3) = 5.9e-20
Identities = 22/77 (28%), Positives = 36/77 (46%)
Query: 47 RDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAG 106
R VC G ++A++ + ++ WG LG +S P+ IV + G
Sbjct: 617 RKVCAGSQS-SLALTSTGQVYAWGCGACLGCG--SSEATALRPKLIEELAATRIVDISIG 673
Query: 107 WAHCVAVTEGGEVYTWG 123
+HC+A++ EVY WG
Sbjct: 674 DSHCLALSHDNEVYAWG 690
Score = 73 (30.8 bits), Expect = 6.0e-20, Sum P(2) = 6.0e-20
Identities = 27/112 (24%), Positives = 45/112 (40%)
Query: 14 VFMWGY-LPGALPQRSP-ILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGS 71
V++WG G L + ++ P P + A + +CG C F + + + GS
Sbjct: 3997 VYLWGAGRHGQLAEAGRNVMVPAAA--P-SFSQAQQVICGQNCTFVIQANGTVLACGEGS 4053
Query: 72 TDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
LGQ + +V + H +A+TE GEV++WG
Sbjct: 4054 YGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWG 4105
Score = 69 (29.3 bits), Expect = 3.9e-19, Sum P(3) = 3.9e-19
Identities = 27/87 (31%), Positives = 40/87 (45%)
Query: 50 CGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPF-PLPTEAS----IVKAA 104
CG A++ D R + ++G D+ G+ G HG+ + P EA I K
Sbjct: 568 CGSSHTIALS-KDGRTVWSFGGGDN-GKL----G-HGDTNRVYKPKVIEALQGMFIRKVC 620
Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSG 131
AG +A+T G+VY WG C+ G
Sbjct: 621 AGSQSSLALTSTGQVYAWGCGACLGCG 647
Score = 59 (25.8 bits), Expect = 2.6e-18, Sum P(3) = 2.6e-18
Identities = 29/118 (24%), Positives = 53/118 (44%)
Query: 11 ERVVFMWG---YLPGALPQRSPILSPLVVRLPLTVGSAWRDVC-GGGCGFAMAISDSRKL 66
E VF WG Y S P +++ PL G VC G + A+++ +L
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQ-GKVV--VCVSAGYRHSAAVTEDGEL 532
Query: 67 ITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGE-VYTWG 123
TWG D G+ + G P + +++ + + G +H +A+++ G V+++G
Sbjct: 533 YTWGE-GDFGR--LGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFG 587
Score = 48 (22.0 bits), Expect = 1.2e-23, Sum P(3) = 1.2e-23
Identities = 13/34 (38%), Positives = 16/34 (47%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS 237
GD N P LV + V+ G HT+ALS
Sbjct: 546 GDSNSRNIPTLV--KDISNVGEVSCGSSHTIALS 577
Score = 44 (20.5 bits), Expect = 3.0e-23, Sum P(3) = 3.0e-23
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS 237
GD N P ++ G+ I V AG + +LAL+
Sbjct: 597 GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630
Score = 43 (20.2 bits), Expect = 0.00033, Sum P(3) = 0.00033
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 436 GQLGLGDVIDRNIPSQVTIEGCVPRNVA--CGWW 467
G LGL +V+D + + +E C ++V+ C W
Sbjct: 3555 GSLGLIEVVDVSTMHRRELEHCYRKDVSITCIAW 3588
Score = 42 (19.8 bits), Expect = 4.8e-23, Sum P(3) = 4.8e-23
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 204 GDENLSAF-PCLVTLNPGVRIATVAAGGRHTLALS 237
G +A P L+ RI ++ G H LALS
Sbjct: 647 GSSEATALRPKLIEELAATRIVDISIGDSHCLALS 681
Score = 42 (19.8 bits), Expect = 5.8e-16, Sum P(3) = 5.8e-16
Identities = 11/37 (29%), Positives = 21/37 (56%)
Query: 204 GDENLSAFPCLVTLNP--GVRIATVAAGGRHTLALSD 238
G+ + +P L+ P G + V+AG RH+ A+++
Sbjct: 493 GNSSTQKYPKLIQ-GPLQGKVVVCVSAGYRHSAAVTE 528
Score = 39 (18.8 bits), Expect = 0.00081, Sum P(3) = 0.00081
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 427 VFCWGWNKYGQL 438
V+ WG ++GQL
Sbjct: 3997 VYLWGAGRHGQL 4008
Score = 38 (18.4 bits), Expect = 1.2e-22, Sum P(3) = 1.2e-22
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 220 GVRIATVAAGGRHTLA 235
G+ I ++AG H+LA
Sbjct: 717 GIAIQQISAGTSHSLA 732
Score = 38 (18.4 bits), Expect = 1.4e-16, Sum P(3) = 1.4e-16
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 113 VTEGGEVYTWG 123
V+E EVY WG
Sbjct: 368 VSETCEVYVWG 378
>UNIPROTKB|Q15751 [details] [associations]
symbol:HERC1 "Probable E3 ubiquitin-protein ligase HERC1"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005086 "ARF
guanyl-nucleotide exchange factor activity" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=TAS] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005794 GO:GO:0016020 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 GO:GO:0005086
SUPFAM:SSF56204 eggNOG:COG5021 EMBL:U50078 EMBL:AC073167
EMBL:AC118274 EMBL:BC040929 IPI:IPI00022479 PIR:S71752
RefSeq:NP_003913.3 UniGene:Hs.210385 HSSP:Q922Y1
ProteinModelPortal:Q15751 SMR:Q15751 IntAct:Q15751 STRING:Q15751
PhosphoSite:Q15751 DMDM:296434522 PaxDb:Q15751 PRIDE:Q15751
Ensembl:ENST00000443617 GeneID:8925 KEGG:hsa:8925 UCSC:uc002amp.3
CTD:8925 GeneCards:GC15M063900 HGNC:HGNC:4867 HPA:HPA049749
MIM:605109 neXtProt:NX_Q15751 PharmGKB:PA29242 HOGENOM:HOG000168589
HOVERGEN:HBG053919 InParanoid:Q15751 KO:K10594 OMA:HHYQDGI
OrthoDB:EOG40GCPW GenomeRNAi:8925 NextBio:33556 ArrayExpress:Q15751
Bgee:Q15751 CleanEx:HS_HERC1 Genevestigator:Q15751 Uniprot:Q15751
Length = 4861
Score = 253 (94.1 bits), Expect = 1.2e-23, Sum P(3) = 1.2e-23
Identities = 63/177 (35%), Positives = 95/177 (53%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
G V ++CG +HSAV+T G L TFG G YG+ G G+T ++ P V++L G QI VA
Sbjct: 4133 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVA 4192
Query: 359 AGLWHTICISSDGD-VYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARH 417
GL HT+ +S+DG V+A A++ P+ +D L + K V+CG +
Sbjct: 4193 CGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDV--LCGIGIKKVACGTQF 4250
Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACGWWHTLLLA 473
+ + DG V+ +G ++ L G + N P Q+ + G + +VA G HTL LA
Sbjct: 4251 SVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALA 4307
Score = 238 (88.8 bits), Expect = 8.5e-22, Sum P(3) = 8.5e-22
Identities = 60/203 (29%), Positives = 99/203 (48%)
Query: 275 YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
+G R L+ N P + + + CG + VI G +L G G YG+ GQ
Sbjct: 4002 WGAGRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQ 4061
Query: 335 GSTDDELSPNCVSSLLGIQIEGVAAGLW---HTICISSDGDVYAXXXXXXXXXXXXXDQA 391
G++DD +S+L G + + H++ ++ G+V++
Sbjct: 4062 GNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDR 4121
Query: 392 ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
+ PR ++A E V +SCG +H+AV+ DGK+F +G YG+LGLG+ ++ +P +
Sbjct: 4122 QRRPRQIEALQGEEV--VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPER 4179
Query: 452 VT-IEGCVPRNVACGWWHTLLLA 473
VT +EG VACG HTL ++
Sbjct: 4180 VTALEGYQIGQVACGLNHTLAVS 4202
Score = 230 (86.0 bits), Expect = 7.9e-21, Sum P(3) = 7.9e-21
Identities = 63/208 (30%), Positives = 97/208 (46%)
Query: 274 SYGKDRSAALSRGSVNSEGPGFRVP---GNYVKGIACGGRHS-AVITDAGALLTFGWGLY 329
++G L G+ +++ RV G + +ACG H+ AV D + FG G Y
Sbjct: 4157 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 4216
Query: 330 GQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXD 389
G+ G G++ + SP + L GI I+ VA G ++ ++ DG VY
Sbjct: 4217 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4276
Query: 390 QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIP 449
+ P+ + P L V + V+ GA HT +A +G V+ WG N GQLGLG P
Sbjct: 4277 RNHNRPQQI--PVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREP 4334
Query: 450 SQVT-IEGCVPRNVACGWWHTLLLAVPP 476
+ VT ++G R ++ G H+ PP
Sbjct: 4335 TLVTGLQGKNVRQISAGRCHSAAWTAPP 4362
Score = 179 (68.1 bits), Expect = 5.1e-15, Sum P(2) = 5.1e-15
Identities = 56/208 (26%), Positives = 94/208 (45%)
Query: 274 SYGKDRSAALSRGSVNSEG-PGFRVPGNYVKGIACGGRHSAVIT-DAGALLTFGWGLYGQ 331
++G+ L G NS P + V ++CG H+ ++ D + +FG G G+
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 332 CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQA 391
G G T+ P + +L G+ I V AG ++ ++S G VYA +A
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS--EA 651
Query: 392 ETL-PRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR-NIP 449
L P+L++ L VS G H ++ D +V+ WG N GQ G G+ P
Sbjct: 652 TALRPKLIE--ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKP 709
Query: 450 SQVT-IEGCVPRNVACGWWHTLL-LAVP 475
+V+ ++G + ++ G H+L A+P
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLAWTALP 737
Score = 179 (68.1 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
Identities = 48/172 (27%), Positives = 86/172 (50%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW-- 362
I G + VI+ G++ G G YG+ G G ++++ + ++ I+ V++
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSD 467
Query: 363 -HTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
HT+ +++G+V++ + P+L+ P L+ VS G RH+A +
Sbjct: 468 GHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCVSAGYRHSAAV 526
Query: 422 ADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
+DG+++ WG +G+LG GD RNIP+ V V V+CG HT+ L+
Sbjct: 527 TEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGE-VSCGSSHTIALS 577
Score = 149 (57.5 bits), Expect = 0.00033, Sum P(3) = 0.00033
Identities = 39/142 (27%), Positives = 69/142 (48%)
Query: 291 EGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLL 350
+GP + G V ++ G RHSA +T+ G L T+G G +G+ G G ++ P V +
Sbjct: 505 QGP---LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS 561
Query: 351 GIQIEGVAAGLWHTICISSDG-DVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSK 409
+ E V+ G HTI +S DG V++ P++++A L+ + +
Sbjct: 562 NVG-E-VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEA--LQGMFIR 617
Query: 410 SVSCGARHTAVIADDGKVFCWG 431
V G++ + + G+V+ WG
Sbjct: 618 KVCAGSQSSLALTSTGQVYAWG 639
Score = 107 (42.7 bits), Expect = 1.2e-23, Sum P(3) = 1.2e-23
Identities = 25/74 (33%), Positives = 41/74 (55%)
Query: 52 GGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAH 109
G G +A + ++ +WG D LG ++ K+ ++ + PL + +V +AG+ H
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQG-PLQGKV-VVCVSAGYRH 522
Query: 110 CVAVTEGGEVYTWG 123
AVTE GE+YTWG
Sbjct: 523 SAAVTEDGELYTWG 536
Score = 84 (34.6 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
Identities = 26/101 (25%), Positives = 47/101 (46%)
Query: 50 CGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAH 109
CG G +MA+++S ++ +WG D G+ + P +V+ + G+ H
Sbjct: 4088 CGSD-GHSMALTESGEVFSWGD-GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKH 4145
Query: 110 CVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFER 150
VT G+++T+G +G +G L G +K + ER
Sbjct: 4146 SAVVTSDGKLFTFG------NGD-YGRLGLGNTSNKKLPER 4179
Score = 82 (33.9 bits), Expect = 4.6e-20, Sum P(3) = 4.6e-20
Identities = 22/77 (28%), Positives = 36/77 (46%)
Query: 47 RDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAG 106
R VC G ++A++ + ++ WG LG +S P+ IV + G
Sbjct: 617 RKVCAGSQS-SLALTSTGQVYAWGCGACLGCG--SSEATALRPKLIEELAATRIVDVSIG 673
Query: 107 WAHCVAVTEGGEVYTWG 123
+HC+A++ EVY WG
Sbjct: 674 DSHCLALSHDNEVYAWG 690
Score = 73 (30.8 bits), Expect = 6.0e-20, Sum P(2) = 6.0e-20
Identities = 27/112 (24%), Positives = 45/112 (40%)
Query: 14 VFMWGY-LPGALPQRSP-ILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGS 71
V++WG G L + ++ P P + A + +CG C F + + + GS
Sbjct: 3999 VYLWGAGRHGQLAEAGRNVMVPAAA--P-SFSQAQQVICGQNCTFVIQANGTVLACGEGS 4055
Query: 72 TDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
LGQ + +V + H +A+TE GEV++WG
Sbjct: 4056 YGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWG 4107
Score = 69 (29.3 bits), Expect = 3.1e-19, Sum P(3) = 3.1e-19
Identities = 27/87 (31%), Positives = 40/87 (45%)
Query: 50 CGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPF-PLPTEAS----IVKAA 104
CG A++ D R + ++G D+ G+ G HG+ + P EA I K
Sbjct: 568 CGSSHTIALS-KDGRTVWSFGGGDN-GKL----G-HGDTNRVYKPKVIEALQGMFIRKVC 620
Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSG 131
AG +A+T G+VY WG C+ G
Sbjct: 621 AGSQSSLALTSTGQVYAWGCGACLGCG 647
Score = 59 (25.8 bits), Expect = 2.6e-18, Sum P(3) = 2.6e-18
Identities = 29/118 (24%), Positives = 53/118 (44%)
Query: 11 ERVVFMWG---YLPGALPQRSPILSPLVVRLPLTVGSAWRDVC-GGGCGFAMAISDSRKL 66
E VF WG Y S P +++ PL G VC G + A+++ +L
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQ-GKVV--VCVSAGYRHSAAVTEDGEL 532
Query: 67 ITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGE-VYTWG 123
TWG D G+ + G P + +++ + + G +H +A+++ G V+++G
Sbjct: 533 YTWGE-GDFGR--LGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFG 587
Score = 48 (22.0 bits), Expect = 1.2e-23, Sum P(3) = 1.2e-23
Identities = 13/34 (38%), Positives = 16/34 (47%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS 237
GD N P LV + V+ G HT+ALS
Sbjct: 546 GDSNSRNIPTLV--KDISNVGEVSCGSSHTIALS 577
Score = 44 (20.5 bits), Expect = 3.0e-23, Sum P(3) = 3.0e-23
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS 237
GD N P ++ G+ I V AG + +LAL+
Sbjct: 597 GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630
Score = 43 (20.2 bits), Expect = 3.8e-23, Sum P(3) = 3.8e-23
Identities = 13/35 (37%), Positives = 16/35 (45%)
Query: 204 GDENLSAF-PCLVTLNPGVRIATVAAGGRHTLALS 237
G +A P L+ RI V+ G H LALS
Sbjct: 647 GSSEATALRPKLIEELAATRIVDVSIGDSHCLALS 681
Score = 43 (20.2 bits), Expect = 0.00033, Sum P(3) = 0.00033
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 436 GQLGLGDVIDRNIPSQVTIEGCVPRNVA--CGWW 467
G LGL +V+D + + +E C ++V+ C W
Sbjct: 3557 GSLGLIEVVDVSTMHRRELEHCYRKDVSVTCIAW 3590
Score = 42 (19.8 bits), Expect = 5.8e-16, Sum P(3) = 5.8e-16
Identities = 11/37 (29%), Positives = 21/37 (56%)
Query: 204 GDENLSAFPCLVTLNP--GVRIATVAAGGRHTLALSD 238
G+ + +P L+ P G + V+AG RH+ A+++
Sbjct: 493 GNSSTQKYPKLIQ-GPLQGKVVVCVSAGYRHSAAVTE 528
Score = 39 (18.8 bits), Expect = 0.00081, Sum P(3) = 0.00081
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 427 VFCWGWNKYGQL 438
V+ WG ++GQL
Sbjct: 3999 VYLWGAGRHGQL 4010
Score = 38 (18.4 bits), Expect = 1.2e-22, Sum P(3) = 1.2e-22
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 220 GVRIATVAAGGRHTLA 235
G+ I ++AG H+LA
Sbjct: 717 GIAIQQISAGTSHSLA 732
Score = 38 (18.4 bits), Expect = 1.4e-16, Sum P(3) = 1.4e-16
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 113 VTEGGEVYTWG 123
V+E EVY WG
Sbjct: 368 VSETCEVYVWG 378
>UNIPROTKB|E2QYQ5 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR017986 InterPro:IPR000569
InterPro:IPR001680 InterPro:IPR003877 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00622 PROSITE:PS50082 PROSITE:PS50237
PROSITE:PS50294 SMART:SM00119 SMART:SM00320 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016567 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 SUPFAM:SSF56204 OMA:HHYQDGI
GeneTree:ENSGT00700000104312 EMBL:AAEX03016202
Ensembl:ENSCAFT00000026962 Uniprot:E2QYQ5
Length = 4863
Score = 253 (94.1 bits), Expect = 1.2e-23, Sum P(3) = 1.2e-23
Identities = 64/177 (36%), Positives = 95/177 (53%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
G V ++CG +HSAV+T G L TFG G YG+ G G+T ++ P V++L G QI VA
Sbjct: 4134 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVA 4193
Query: 359 AGLWHTICISSDGD-VYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARH 417
GL HT+ +S+DG V+A A++ P+ +D L + K V+CG +
Sbjct: 4194 CGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDV--LCGIGIKKVACGTQF 4251
Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACGWWHTLLLA 473
+ + DG V+ +G ++ L G + N P Q+ + G V +VA G HTL LA
Sbjct: 4252 SVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALA 4308
Score = 238 (88.8 bits), Expect = 8.5e-22, Sum P(3) = 8.5e-22
Identities = 60/203 (29%), Positives = 99/203 (48%)
Query: 275 YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
+G R L+ N P + + + CG + VI G +L G G YG+ GQ
Sbjct: 4003 WGAGRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQ 4062
Query: 335 GSTDDELSPNCVSSLLGIQIEGVAAGLW---HTICISSDGDVYAXXXXXXXXXXXXXDQA 391
G++DD +S+L G + + H++ ++ G+V++
Sbjct: 4063 GNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDR 4122
Query: 392 ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
+ PR ++A E V +SCG +H+AV+ DGK+F +G YG+LGLG+ ++ +P +
Sbjct: 4123 QRRPRQIEALQGEEV--VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPER 4180
Query: 452 VT-IEGCVPRNVACGWWHTLLLA 473
VT +EG VACG HTL ++
Sbjct: 4181 VTALEGYQIGQVACGLNHTLAVS 4203
Score = 229 (85.7 bits), Expect = 1.0e-20, Sum P(3) = 1.0e-20
Identities = 64/208 (30%), Positives = 96/208 (46%)
Query: 274 SYGKDRSAALSRGSVNSEGPGFRVP---GNYVKGIACGGRHS-AVITDAGALLTFGWGLY 329
++G L G+ +++ RV G + +ACG H+ AV D + FG G Y
Sbjct: 4158 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 4217
Query: 330 GQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXD 389
G+ G G++ + SP V L GI I+ VA G ++ ++ DG VY
Sbjct: 4218 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4277
Query: 390 QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIP 449
+ P+ + P L V + V+ GA HT +A G V+ WG N GQLGLG P
Sbjct: 4278 RNHNRPQQI--PVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREP 4335
Query: 450 SQVTI-EGCVPRNVACGWWHTLLLAVPP 476
+ VT+ +G R ++ G H+ PP
Sbjct: 4336 TLVTVLQGKNIRQISAGRCHSAAWTAPP 4363
Score = 179 (68.1 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
Identities = 48/172 (27%), Positives = 86/172 (50%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW-- 362
I G + VI+ G++ G G YG+ G G ++++ + ++ I+ V++
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSD 467
Query: 363 -HTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
HT+ +++G+V++ + P+L+ P L+ VS G RH+A +
Sbjct: 468 GHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCVSAGYRHSAAV 526
Query: 422 ADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
+DG+++ WG +G+LG GD RNIP+ V V V+CG HT+ L+
Sbjct: 527 TEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGE-VSCGSSHTIALS 577
Score = 167 (63.8 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 56/209 (26%), Positives = 93/209 (44%)
Query: 274 SYGKDRSAALSRGSVNSEG-PGFRVPGNYVKGIACGGRHSAVIT-DAGALLTFGWG-LYG 330
++G+ L G NS P + V ++CG H+ ++ D + +FG G G
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNVG 593
Query: 331 QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQ 390
+ G G T+ P V +L G+ I V AG ++ ++S G VYA +
Sbjct: 594 KLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS--E 651
Query: 391 AETL-PRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR-NI 448
A L P+L++ L +S G H + D +V+ WG N GQ G G+
Sbjct: 652 ATALRPKLIE--ELAATRIVDISIGDSHVWLFVMDNEVYAWGNNSMGQCGQGNSTGPITK 709
Query: 449 PSQVT-IEGCVPRNVACGWWHTLL-LAVP 475
P +V+ ++G + ++ G H+L A+P
Sbjct: 710 PKKVSGLDGIAIQQISAGTSHSLAWTALP 738
Score = 149 (57.5 bits), Expect = 0.00033, Sum P(3) = 0.00033
Identities = 40/143 (27%), Positives = 70/143 (48%)
Query: 291 EGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLL 350
+GP + G V ++ G RHSA +T+ G L T+G G +G+ G G ++ P V +
Sbjct: 505 QGP---LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS 561
Query: 351 GIQIEGVAAGLWHTICISSDG-DVYAXXXXXXXXXXXXXDQAETL-PRLLDAPSLENVHS 408
+ E V+ G HTI +S DG V++ D P++++A L+ +
Sbjct: 562 NVG-E-VSCGSSHTIALSKDGRTVWSFGGGDNVGKLGHGDTNRVYKPKVVEA--LQGMFI 617
Query: 409 KSVSCGARHTAVIADDGKVFCWG 431
+ V G++ + + G+V+ WG
Sbjct: 618 RKVCAGSQSSLALTSTGQVYAWG 640
Score = 107 (42.7 bits), Expect = 1.2e-23, Sum P(3) = 1.2e-23
Identities = 25/74 (33%), Positives = 41/74 (55%)
Query: 52 GGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAH 109
G G +A + ++ +WG D LG ++ K+ ++ + PL + +V +AG+ H
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQG-PLQGKV-VVCVSAGYRH 522
Query: 110 CVAVTEGGEVYTWG 123
AVTE GE+YTWG
Sbjct: 523 SAAVTEDGELYTWG 536
Score = 84 (34.6 bits), Expect = 2.9e-18, Sum P(2) = 2.9e-18
Identities = 26/101 (25%), Positives = 47/101 (46%)
Query: 50 CGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAH 109
CG G +MA+++S ++ +WG D G+ + P +V+ + G+ H
Sbjct: 4089 CGSD-GHSMALTESGEVFSWGD-GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKH 4146
Query: 110 CVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFER 150
VT G+++T+G +G +G L G +K + ER
Sbjct: 4147 SAVVTSDGKLFTFG------NGD-YGRLGLGNTSNKKLPER 4180
Score = 80 (33.2 bits), Expect = 7.4e-20, Sum P(3) = 7.4e-20
Identities = 27/87 (31%), Positives = 41/87 (47%)
Query: 50 CGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPF-PLPTEAS----IVKAA 104
CG A++ D R + ++G D++G+ G HG+ + P EA I K
Sbjct: 568 CGSSHTIALS-KDGRTVWSFGGGDNVGKL----G-HGDTNRVYKPKVVEALQGMFIRKVC 621
Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSG 131
AG +A+T G+VY WG C+ G
Sbjct: 622 AGSQSSLALTSTGQVYAWGCGACLGCG 648
Score = 73 (30.8 bits), Expect = 6.0e-20, Sum P(2) = 6.0e-20
Identities = 27/112 (24%), Positives = 45/112 (40%)
Query: 14 VFMWGY-LPGALPQRSP-ILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGS 71
V++WG G L + ++ P P + A + +CG C F + + + GS
Sbjct: 4000 VYLWGAGRHGQLAEAGRNVMVPAAA--P-SFSQAQQVICGQNCTFVIQANGTVLACGEGS 4056
Query: 72 TDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
LGQ + +V + H +A+TE GEV++WG
Sbjct: 4057 YGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWG 4108
Score = 59 (25.8 bits), Expect = 2.0e-18, Sum P(3) = 2.0e-18
Identities = 29/118 (24%), Positives = 53/118 (44%)
Query: 11 ERVVFMWG---YLPGALPQRSPILSPLVVRLPLTVGSAWRDVC-GGGCGFAMAISDSRKL 66
E VF WG Y S P +++ PL G VC G + A+++ +L
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQ-GKVV--VCVSAGYRHSAAVTEDGEL 532
Query: 67 ITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGE-VYTWG 123
TWG D G+ + G P + +++ + + G +H +A+++ G V+++G
Sbjct: 533 YTWGE-GDFGR--LGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFG 587
Score = 57 (25.1 bits), Expect = 1.7e-17, Sum P(3) = 1.7e-17
Identities = 20/77 (25%), Positives = 31/77 (40%)
Query: 47 RDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAG 106
R VC G ++A++ + ++ WG LG +S P+ IV + G
Sbjct: 618 RKVCAGSQS-SLALTSTGQVYAWGCGACLGCG--SSEATALRPKLIEELAATRIVDISIG 674
Query: 107 WAHCVAVTEGGEVYTWG 123
+H EVY WG
Sbjct: 675 DSHVWLFVMDNEVYAWG 691
Score = 48 (22.0 bits), Expect = 1.2e-23, Sum P(3) = 1.2e-23
Identities = 13/34 (38%), Positives = 16/34 (47%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS 237
GD N P LV + V+ G HT+ALS
Sbjct: 546 GDSNSRNIPTLV--KDISNVGEVSCGSSHTIALS 577
Score = 45 (20.9 bits), Expect = 2.4e-23, Sum P(3) = 2.4e-23
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS 237
GD N P +V G+ I V AG + +LAL+
Sbjct: 598 GDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALT 631
Score = 43 (20.2 bits), Expect = 0.00033, Sum P(3) = 0.00033
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 436 GQLGLGDVIDRNIPSQVTIEGCVPRNVA--CGWW 467
G LGL +V+D + + +E C ++V+ C W
Sbjct: 3558 GSLGLIEVVDVSTMHRRELEHCYRKDVSVTCIAW 3591
Score = 42 (19.8 bits), Expect = 5.8e-16, Sum P(3) = 5.8e-16
Identities = 11/37 (29%), Positives = 21/37 (56%)
Query: 204 GDENLSAFPCLVTLNP--GVRIATVAAGGRHTLALSD 238
G+ + +P L+ P G + V+AG RH+ A+++
Sbjct: 493 GNSSTQKYPKLIQ-GPLQGKVVVCVSAGYRHSAAVTE 528
Score = 39 (18.8 bits), Expect = 0.00081, Sum P(3) = 0.00081
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 427 VFCWGWNKYGQL 438
V+ WG ++GQL
Sbjct: 4000 VYLWGAGRHGQL 4011
Score = 38 (18.4 bits), Expect = 1.2e-22, Sum P(3) = 1.2e-22
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 220 GVRIATVAAGGRHTLA 235
G+ I ++AG H+LA
Sbjct: 718 GIAIQQISAGTSHSLA 733
Score = 38 (18.4 bits), Expect = 1.4e-16, Sum P(3) = 1.4e-16
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 113 VTEGGEVYTWG 123
V+E EVY WG
Sbjct: 368 VSETCEVYVWG 378
>UNIPROTKB|E1C4H7 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] Pfam:PF00632 InterPro:IPR017986
InterPro:IPR000569 InterPro:IPR001680 InterPro:IPR003877
InterPro:IPR015880 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 SMART:SM00355 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008270 GO:GO:0016567 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
OMA:HHYQDGI GeneTree:ENSGT00700000104312 EMBL:AADN02040444
EMBL:AADN02040445 EMBL:AADN02040446 IPI:IPI00593079
Ensembl:ENSGALT00000005344 Uniprot:E1C4H7
Length = 4863
Score = 240 (89.5 bits), Expect = 4.8e-22, Sum P(3) = 4.8e-22
Identities = 63/179 (35%), Positives = 94/179 (52%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
G V ++CG +HSAV+T G L TFG G YG+ G G+T ++ P V++L G QI VA
Sbjct: 4133 GEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVA 4192
Query: 359 AGLWHTICISSDGD-VYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARH 417
GL HT+ +S+DG V+A A++ P+ +D L + K V+CG +
Sbjct: 4193 CGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDI--LCGIGIKKVACGTQF 4250
Query: 418 TAVIADDGKVFCWGWNKYGQLGL--GDVIDRNIPSQVTI-EGCVPRNVACGWWHTLLLA 473
+ + DG V+ +G +GL G + N P QV + G ++A G HTL L+
Sbjct: 4251 SVALTKDGHVYTFGQVSDRLIGLPEGRARNHNRPQQVPVLSGVFIEDIAVGAEHTLALS 4309
Score = 240 (89.5 bits), Expect = 4.8e-22, Sum P(3) = 4.8e-22
Identities = 63/208 (30%), Positives = 96/208 (46%)
Query: 274 SYGKDRSAALSRGSVNSEGPGFRVP---GNYVKGIACGGRHS-AVITDAGALLTFGWGLY 329
++G L G+ +++ RV G + +ACG H+ AV TD + FG G Y
Sbjct: 4157 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDY 4216
Query: 330 GQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXD 389
G+ G G++ + SP V L GI I+ VA G ++ ++ DG VY
Sbjct: 4217 GKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQVSDRLIGLPEG 4276
Query: 390 QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIP 449
+A R P L V + ++ GA HT ++ G V+ WG N GQLGLG P
Sbjct: 4277 RARNHNRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREP 4336
Query: 450 SQVTI-EGCVPRNVACGWWHTLLLAVPP 476
+ +T+ +G R ++ G H+ PP
Sbjct: 4337 TLITVLQGKNIRQISAGRCHSAAWTAPP 4364
Score = 231 (86.4 bits), Expect = 5.9e-21, Sum P(3) = 5.9e-21
Identities = 59/203 (29%), Positives = 99/203 (48%)
Query: 275 YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
+G R L+ N P + + + CG + VI G +L G G YG+ GQ
Sbjct: 4002 WGAGRHGQLAEAGRNVMVPVAAPSFSQAQQVVCGQNCTFVIQANGTVLACGEGSYGRLGQ 4061
Query: 335 GSTDDELSPNCVSSLLGIQIEGVAAGLW---HTICISSDGDVYAXXXXXXXXXXXXXDQA 391
G++DD +S+L G + + H++ ++ G+V++
Sbjct: 4062 GNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDR 4121
Query: 392 ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
+ PR ++A E V +SCG +H+AV+ DGK+F +G YG+LGLG+ ++ +P +
Sbjct: 4122 QRRPRQIEALQGEEV--VQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPER 4179
Query: 452 VT-IEGCVPRNVACGWWHTLLLA 473
VT +EG VACG HT+ ++
Sbjct: 4180 VTALEGYQIGQVACGLNHTVAVS 4202
Score = 179 (68.1 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
Identities = 48/172 (27%), Positives = 86/172 (50%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW-- 362
I G + VI+ G++ G G YG+ G G ++++ + ++ I+ V++
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSD 467
Query: 363 -HTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
HT+ +++G+V++ + P+L+ P L+ VS G RH+A +
Sbjct: 468 GHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCVSAGYRHSAAV 526
Query: 422 ADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
+DG+++ WG +G+LG GD RNIP+ V V V+CG HT+ L+
Sbjct: 527 TEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGE-VSCGSSHTIALS 577
Score = 176 (67.0 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 55/208 (26%), Positives = 94/208 (45%)
Query: 274 SYGKDRSAALSRGSVNSEG-PGFRVPGNYVKGIACGGRHSAVIT-DAGALLTFGWGLYGQ 331
++G+ L G NS P + V ++CG H+ ++ D + +FG G G+
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 332 CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQA 391
G G T+ P + +L G+ I V AG ++ ++S G VYA +A
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS--EA 651
Query: 392 ETL-PRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR-NIP 449
L P+L++ L +S G H ++ D +V+ WG N GQ G G+ P
Sbjct: 652 TALRPKLIE--ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKP 709
Query: 450 SQVT-IEGCVPRNVACGWWHTLL-LAVP 475
+V+ ++G + ++ G H+L A+P
Sbjct: 710 KKVSGLDGVSIQQISAGTSHSLAWTALP 737
Score = 149 (57.5 bits), Expect = 8.5e-05, Sum P(3) = 8.5e-05
Identities = 39/142 (27%), Positives = 69/142 (48%)
Query: 291 EGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLL 350
+GP + G V ++ G RHSA +T+ G L T+G G +G+ G G ++ P V +
Sbjct: 505 QGP---LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS 561
Query: 351 GIQIEGVAAGLWHTICISSDG-DVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSK 409
+ E V+ G HTI +S DG V++ P++++A L+ + +
Sbjct: 562 NVG-E-VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEA--LQGMFIR 617
Query: 410 SVSCGARHTAVIADDGKVFCWG 431
V G++ + + G+V+ WG
Sbjct: 618 KVCAGSQSSLALTSTGQVYAWG 639
Score = 107 (42.7 bits), Expect = 4.8e-22, Sum P(3) = 4.8e-22
Identities = 25/74 (33%), Positives = 41/74 (55%)
Query: 52 GGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAH 109
G G +A + ++ +WG D LG ++ K+ ++ + PL + +V +AG+ H
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQG-PLQGKV-VVCVSAGYRH 522
Query: 110 CVAVTEGGEVYTWG 123
AVTE GE+YTWG
Sbjct: 523 SAAVTEDGELYTWG 536
Score = 83 (34.3 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 26/101 (25%), Positives = 47/101 (46%)
Query: 50 CGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAH 109
CG G +MA+++S ++ +WG D G+ + P +V+ + G+ H
Sbjct: 4088 CGSD-GHSMALTESGEVFSWGD-GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKH 4145
Query: 110 CVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFER 150
VT G+++T+G +G +G L G +K + ER
Sbjct: 4146 SAVVTADGKLFTFG------NGD-YGRLGLGNTSNKKLPER 4179
Score = 81 (33.6 bits), Expect = 1.9e-18, Sum P(3) = 1.9e-18
Identities = 22/77 (28%), Positives = 36/77 (46%)
Query: 47 RDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAG 106
R VC G ++A++ + ++ WG LG +S P+ IV + G
Sbjct: 617 RKVCAGSQS-SLALTSTGQVYAWGCGACLGCG--SSEATALRPKLIEELAATRIVDISIG 673
Query: 107 WAHCVAVTEGGEVYTWG 123
+HC+A++ EVY WG
Sbjct: 674 DSHCLALSHDNEVYAWG 690
Score = 77 (32.2 bits), Expect = 8.0e-19, Sum P(2) = 8.0e-19
Identities = 29/112 (25%), Positives = 46/112 (41%)
Query: 14 VFMWGY-LPGALPQRSP-ILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGS 71
V++WG G L + ++ P V P + A + VCG C F + + + GS
Sbjct: 3999 VYLWGAGRHGQLAEAGRNVMVP--VAAP-SFSQAQQVVCGQNCTFVIQANGTVLACGEGS 4055
Query: 72 TDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
LGQ + +V + H +A+TE GEV++WG
Sbjct: 4056 YGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWG 4107
Score = 69 (29.3 bits), Expect = 1.6e-17, Sum P(3) = 1.6e-17
Identities = 27/87 (31%), Positives = 40/87 (45%)
Query: 50 CGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPF-PLPTEAS----IVKAA 104
CG A++ D R + ++G D+ G+ G HG+ + P EA I K
Sbjct: 568 CGSSHTIALS-KDGRTVWSFGGGDN-GKL----G-HGDTNRVYKPKVIEALQGMFIRKVC 620
Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSG 131
AG +A+T G+VY WG C+ G
Sbjct: 621 AGSQSSLALTSTGQVYAWGCGACLGCG 647
Score = 59 (25.8 bits), Expect = 1.0e-16, Sum P(3) = 1.0e-16
Identities = 29/118 (24%), Positives = 53/118 (44%)
Query: 11 ERVVFMWG---YLPGALPQRSPILSPLVVRLPLTVGSAWRDVC-GGGCGFAMAISDSRKL 66
E VF WG Y S P +++ PL G VC G + A+++ +L
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQ-GKVV--VCVSAGYRHSAAVTEDGEL 532
Query: 67 ITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGE-VYTWG 123
TWG D G+ + G P + +++ + + G +H +A+++ G V+++G
Sbjct: 533 YTWGE-GDFGR--LGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFG 587
Score = 49 (22.3 bits), Expect = 6.6e-16, Sum P(2) = 6.6e-16
Identities = 18/80 (22%), Positives = 32/80 (40%)
Query: 11 ERVVFMWGYLPGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDS--RKLI- 67
E +V +W Y+ G+ + + P V G AW + G G + ++ L+
Sbjct: 3644 EEMVKLWAYMGGSWRRLHSLPHPAFVN-----GIAWCGLPGKGSKLQLLLATGCHNGLVC 3698
Query: 68 TWGSTDDLGQSYVTSGKHGE 87
W D+ + TS + E
Sbjct: 3699 VWTVPQDIAVTLQTSSAYSE 3718
Score = 49 (22.3 bits), Expect = 8.5e-05, Sum P(3) = 8.5e-05
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 436 GQLGLGDVIDRNIPSQVTIEGCVPRNVA--CGWW 467
G LGL +V+D + ++ +E C ++V+ C W
Sbjct: 3554 GSLGLIEVVDISTMHRIELEHCYRKDVSVTCLAW 3587
Score = 48 (22.0 bits), Expect = 4.8e-22, Sum P(3) = 4.8e-22
Identities = 13/34 (38%), Positives = 16/34 (47%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS 237
GD N P LV + V+ G HT+ALS
Sbjct: 546 GDSNSRNIPTLV--KDISNVGEVSCGSSHTIALS 577
Score = 44 (20.5 bits), Expect = 1.2e-21, Sum P(3) = 1.2e-21
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS 237
GD N P ++ G+ I V AG + +LAL+
Sbjct: 597 GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630
Score = 42 (19.8 bits), Expect = 2.0e-21, Sum P(3) = 2.0e-21
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 204 GDENLSAF-PCLVTLNPGVRIATVAAGGRHTLALS 237
G +A P L+ RI ++ G H LALS
Sbjct: 647 GSSEATALRPKLIEELAATRIVDISIGDSHCLALS 681
Score = 42 (19.8 bits), Expect = 2.3e-14, Sum P(3) = 2.3e-14
Identities = 11/37 (29%), Positives = 21/37 (56%)
Query: 204 GDENLSAFPCLVTLNP--GVRIATVAAGGRHTLALSD 238
G+ + +P L+ P G + V+AG RH+ A+++
Sbjct: 493 GNSSTQKYPKLIQ-GPLQGKVVVCVSAGYRHSAAVTE 528
Score = 40 (19.1 bits), Expect = 0.00065, Sum P(3) = 0.00065
Identities = 12/40 (30%), Positives = 17/40 (42%)
Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIEG-CVPRNVACG 465
V+ WG ++GQL RN+ V + V CG
Sbjct: 3999 VYLWGAGRHGQLAEAG---RNVMVPVAAPSFSQAQQVVCG 4035
Score = 39 (18.8 bits), Expect = 4.0e-21, Sum P(3) = 4.0e-21
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 220 GVRIATVAAGGRHTLA 235
GV I ++AG H+LA
Sbjct: 717 GVSIQQISAGTSHSLA 732
Score = 38 (18.4 bits), Expect = 5.7e-15, Sum P(3) = 5.7e-15
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 113 VTEGGEVYTWG 123
V+E EVY WG
Sbjct: 368 VSETCEVYVWG 378
>UNIPROTKB|F1NDJ4 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104312 EMBL:AADN02038799 IPI:IPI00812606
Ensembl:ENSGALT00000038135 OMA:GHKDTSS Uniprot:F1NDJ4
Length = 221
Score = 162 (62.1 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 36/81 (44%), Positives = 47/81 (58%)
Query: 392 ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIP-- 449
+ P LLD P LE + +VSCG+RHTA + G++ WGW KYGQLG GD + P
Sbjct: 104 QAFPALLDLP-LEPAVA-AVSCGSRHTAALTRGGELNTWGWGKYGQLGHGDRASCDHPRR 161
Query: 450 -SQVTIEGCVPRNVACGWWHT 469
Q+ EG + V CG W+T
Sbjct: 162 VEQLWAEGLRAQEVVCGPWNT 182
Score = 138 (53.6 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 28/74 (37%), Positives = 40/74 (54%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLL--GIQIEGVAA 359
V ++CG RH+A +T G L T+GWG YGQ G G P V L G++ + V
Sbjct: 118 VAAVSCGSRHTAALTRGGELNTWGWGKYGQLGHGDRASCDHPRRVEQLWAEGLRAQEVVC 177
Query: 360 GLWHT-ICISSDGD 372
G W+T +C+ G+
Sbjct: 178 GPWNTYVCVLQQGE 191
Score = 120 (47.3 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 21/46 (45%), Positives = 29/46 (63%)
Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVY 374
+GQ G GS + E P V +L G+ + VAAG WH+ C+S GD+Y
Sbjct: 10 HGQLGHGSLESEQQPRLVEALGGVPMRAVAAGGWHSACVSDGGDLY 55
Score = 118 (46.6 bits), Expect = 0.00011, P = 0.00011
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 390 QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL 440
++E PRL++A L V ++V+ G H+A ++D G ++ WGWN+ GQLGL
Sbjct: 19 ESEQQPRLVEA--LGGVPMRAVAAGGWHSACVSDGGDLYVWGWNESGQLGL 67
Score = 88 (36.0 bits), Expect = 2.3e-18, Sum P(2) = 2.3e-18
Identities = 22/58 (37%), Positives = 30/58 (51%)
Query: 279 RSAALSRGSVNSEG-PGF--RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCG 333
R L GS+ SE P + G ++ +A GG HSA ++D G L +GW GQ G
Sbjct: 9 RHGQLGHGSLESEQQPRLVEALGGVPMRAVAAGGWHSACVSDGGDLYVWGWNESGQLG 66
Score = 85 (35.0 bits), Expect = 4.8e-18, Sum P(2) = 4.8e-18
Identities = 13/24 (54%), Positives = 17/24 (70%)
Query: 103 AAAGWAHCVAVTEGGEVYTWGWKE 126
AA GW H V++GG++Y WGW E
Sbjct: 39 AAGGW-HSACVSDGGDLYVWGWNE 61
Score = 53 (23.7 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSD 238
P LV GV + VAAGG H+ +SD
Sbjct: 24 PRLVEALGGVPMRAVAAGGWHSACVSD 50
>TAIR|locus:2156233 [details] [associations]
symbol:RUG2 "RCC1/UVR8/GEF-like 2" species:3702
"Arabidopsis thaliana" [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
HSSP:P18754 EMBL:BT005508 EMBL:AK117526 IPI:IPI00527447
RefSeq:NP_199644.2 UniGene:At.29855 ProteinModelPortal:Q8GYL6
SMR:Q8GYL6 PRIDE:Q8GYL6 EnsemblPlants:AT5G48330.1 GeneID:834886
KEGG:ath:AT5G48330 TAIR:At5g48330 HOGENOM:HOG000238877
InParanoid:Q8GYL6 OMA:SAGHYHS PhylomeDB:Q8GYL6
ProtClustDB:CLSN2680477 ArrayExpress:Q8GYL6 Genevestigator:Q8GYL6
Uniprot:Q8GYL6
Length = 455
Score = 204 (76.9 bits), Expect = 1.4e-21, Sum P(3) = 1.4e-21
Identities = 56/173 (32%), Positives = 83/173 (47%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSP-NCVSSLLGIQIEGVAAG 360
V IACG HS ++ G LL+ G +YGQ G+ D + P + S + I AAG
Sbjct: 288 VADIACGSDHSLILCHDGTLLSAGSNIYGQLGRSKQDLGMKPVDITESPISI-----AAG 342
Query: 361 LWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
L H++ I + G+ + E LPR + + SVS G H+
Sbjct: 343 LGHSLAICNRGERNILSWGWNRSRQLGRGKPENLPR--EVEGFDGESPASVSAGRVHSLC 400
Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
+ + G+ + WG K G+LGLG D P + +EGCV + VA G+ H+L+L
Sbjct: 401 VTEKGEAWVWGCGKNGRLGLGSSSDEPEPMLLEDVEGCVLQAVA-GFDHSLIL 452
Score = 169 (64.5 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 50/168 (29%), Positives = 83/168 (49%)
Query: 321 LLTFGWGLYGQCGQGSTD------DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVY 374
+++FG G G G S+ D P VS+L I ++AG +H++ ++S G+++
Sbjct: 46 VMSFGDGNLGALGLSSSSIPGMGMDAYEPTVVSNLPS-DISSISAGHYHSLAVTSSGEIW 104
Query: 375 A----XXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
A + + P+ ++ LENV+ ++ +A I DDG ++ W
Sbjct: 105 AWGRNDEGQLGRIVIDSSRDSRSEPKRVEG--LENVNVQAAFASGVVSAAIGDDGSLWVW 162
Query: 431 GWNKYGQLGLGD-VIDRNIPSQV---TIEGCVPRNVACGWWHTLLLAV 474
G +K GQLGLG+ +I+ +PS+V E V V+ GW H L L V
Sbjct: 163 GRSKRGQLGLGNGIIEARVPSRVENLAAEHVV--KVSLGWGHALALTV 208
Score = 121 (47.7 bits), Expect = 0.00024, P = 0.00024
Identities = 50/206 (24%), Positives = 82/206 (39%)
Query: 274 SYGKDRSAALSRGSVNSEGPGF-----RVPGNY---VKGIACGGRHSAVITDAGALLTFG 325
S+G AL S + G G V N + I+ G HS +T +G + +G
Sbjct: 48 SFGDGNLGALGLSSSSIPGMGMDAYEPTVVSNLPSDISSISAGHYHSLAVTSSGEIWAWG 107
Query: 326 WGLYGQCGQ----GSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXX 381
GQ G+ S D P V L + ++ A + I DG ++
Sbjct: 108 RNDEGQLGRIVIDSSRDSRSEPKRVEGLENVNVQAAFASGVVSAAIGDDGSLWVWGRSKR 167
Query: 382 XXXXXXXDQAET-LPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG- 439
E +P ++ + E H VS G H + DGKVF WG+ G++G
Sbjct: 168 GQLGLGNGIIEARVPSRVENLAAE--HVVKVSLGWGHALALTVDGKVFGWGYVADGRVGN 225
Query: 440 LGDVIDRNIPSQVTIEGCVPRNVACG 465
+G ++ ++ +T +G + + A G
Sbjct: 226 VGLPLEASLLDSIT-DGSMKGHHAAG 250
Score = 106 (42.4 bits), Expect = 5.1e-10, Sum P(3) = 5.1e-10
Identities = 30/100 (30%), Positives = 49/100 (49%)
Query: 274 SYGKDRSAALSRGSVNS---EGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
S+G +RS L RG + E GF G ++ G HS +T+ G +G G G
Sbjct: 359 SWGWNRSRQLGRGKPENLPREVEGF--DGESPASVSAGRVHSLCVTEKGEAWVWGCGKNG 416
Query: 331 QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
+ G GS+ DE P + + G ++ VA G H++ + ++
Sbjct: 417 RLGLGSSSDEPEPMLLEDVEGCVLQAVA-GFDHSLILVAE 455
Score = 96 (38.9 bits), Expect = 1.4e-21, Sum P(3) = 1.4e-21
Identities = 25/76 (32%), Positives = 36/76 (47%)
Query: 59 AISDSRKLITWGSTDDLGQSYVTSGK-HGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGG 117
AI D L WG + GQ + +G +P +VK + GW H +A+T G
Sbjct: 152 AIGDDGSLWVWGRSKR-GQLGLGNGIIEARVPSRVENLAAEHVVKVSLGWGHALALTVDG 210
Query: 118 EVYTWGWKECVPSGRV 133
+V+ WG+ V GRV
Sbjct: 211 KVFGWGY---VADGRV 223
Score = 74 (31.1 bits), Expect = 2.6e-19, Sum P(3) = 2.6e-19
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 94 LPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLS 138
LP++ S + +AG H +AVT GE++ WG + GR+ D S
Sbjct: 80 LPSDISSI--SAGHYHSLAVTSSGEIWAWGRNDEGQLGRIVIDSS 122
Score = 66 (28.3 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 93 PLPTEASIVKAAAGWAHCVAVTEGGE--VYTWGWKECVPSGR 132
P+ S + AAG H +A+ GE + +WGW GR
Sbjct: 329 PVDITESPISIAAGLGHSLAICNRGERNILSWGWNRSRQLGR 370
Score = 64 (27.6 bits), Expect = 2.8e-18, Sum P(3) = 2.8e-18
Identities = 22/91 (24%), Positives = 42/91 (46%)
Query: 39 PLTVGSAWRDVCGGGCGF--AMAISDSRKLITWGSTDD--LGQSYVTSGKHGEIPEPFPL 94
P V + D+ G ++A++ S ++ WG D+ LG+ + S + EP +
Sbjct: 74 PTVVSNLPSDISSISAGHYHSLAVTSSGEIWAWGRNDEGQLGRIVIDSSRDSR-SEPKRV 132
Query: 95 PTEASI-VKAA-AGWAHCVAVTEGGEVYTWG 123
++ V+AA A A+ + G ++ WG
Sbjct: 133 EGLENVNVQAAFASGVVSAAIGDDGSLWVWG 163
Score = 56 (24.8 bits), Expect = 1.4e-21, Sum P(3) = 1.4e-21
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 195 KQTAES-SSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLAL 236
K+ E+ S D ++ PCLV ++A +A G H+L L
Sbjct: 259 KKVVEAMSKENDMPIAWEPCLVEETCNEKVADIACGSDHSLIL 301
Score = 49 (22.3 bits), Expect = 9.5e-17, Sum P(3) = 9.5e-17
Identities = 16/49 (32%), Positives = 24/49 (48%)
Query: 53 GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIV 101
G G A+A++ K+ WG YV G+ G + LP EAS++
Sbjct: 199 GWGHALALTVDGKVFGWG--------YVADGRVGNVG----LPLEASLL 235
Score = 43 (20.2 bits), Expect = 6.3e-14, Sum P(2) = 6.3e-14
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 200 SSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS 237
SSS + A+ V N I++++AG H+LA++
Sbjct: 61 SSSIPGMGMDAYEPTVVSNLPSDISSISAGHYHSLAVT 98
>FB|FBgn0031107 [details] [associations]
symbol:HERC2 "HECT and RLD domain containing protein 2
ortholog (H. sapiens)" species:7227 "Drosophila melanogaster"
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=NAS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA;NAS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0020037 "heme binding" evidence=IEA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] Pfam:PF00632 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF06701 PROSITE:PS50237 PROSITE:PS51416
SMART:SM00119 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 GO:GO:0005814 GO:GO:0046872
EMBL:AE014298 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 InterPro:IPR015940 PROSITE:PS50030
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
PROSITE:PS51284 InterPro:IPR000859 SUPFAM:SSF49854 GO:GO:0042787
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00700000104208 EMBL:AY113293 EMBL:AF189221
RefSeq:NP_608388.2 UniGene:Dm.3302 ProteinModelPortal:Q9VR91
SMR:Q9VR91 IntAct:Q9VR91 STRING:Q9VR91 PaxDb:Q9VR91
EnsemblMetazoa:FBtr0301344 GeneID:33035 KEGG:dme:Dmel_CG11734
UCSC:CG11734-RB CTD:8924 FlyBase:FBgn0031107 InParanoid:Q9VR91
KO:K10595 OMA:QLAFTRD OrthoDB:EOG48GTJ3 PhylomeDB:Q9VR91
GenomeRNAi:33035 NextBio:781623 Bgee:Q9VR91 GermOnline:CG11734
Uniprot:Q9VR91
Length = 4912
Score = 222 (83.2 bits), Expect = 2.1e-21, Sum P(3) = 2.1e-21
Identities = 59/201 (29%), Positives = 97/201 (48%)
Query: 274 SYGKDRSAALSRGS-VNSEGPGF--RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
++G+ L G+ ++ + P + G V IACG HSA IT +G +LT+G G YG
Sbjct: 4159 AWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYG 4218
Query: 331 QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAXXXXXXXXXXXXX 388
+ G G ++D+L P V +LLG + +A G T+CI+ D +V++
Sbjct: 4219 RLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGG 4278
Query: 389 DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNI 448
LP ++ SL + V CG++ + + G V+ WG + +LG G V
Sbjct: 4279 SDGCKLPYKIE--SLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRR 4336
Query: 449 PSQVT-IEGCVPRNVACGWWH 468
P +V ++G ++A G H
Sbjct: 4337 PKKVAALQGKKIISIATGSLH 4357
Score = 187 (70.9 bits), Expect = 1.0e-15, Sum P(3) = 1.0e-15
Identities = 47/180 (26%), Positives = 84/180 (46%)
Query: 299 GNYVKGIACGGR--HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG 356
G V +ACG R + +T+ GA+ ++G G +G+ G+G ++ +P+ + L GI +
Sbjct: 3176 GRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQ 3235
Query: 357 VAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGAR 416
+ G ++ ++ G+V+ DQ P+ + L V+ GA
Sbjct: 3236 IECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGG--LRGRRVIHVAVGAL 3293
Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLAVP 475
H + D G+V+ WG N +GQ G G+ P+ V ++ VACG H++ +P
Sbjct: 3294 HCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIAWGLP 3353
Score = 183 (69.5 bits), Expect = 6.6e-17, Sum P(3) = 6.6e-17
Identities = 48/162 (29%), Positives = 78/162 (48%)
Query: 308 GGRHSA-VITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA--AGLWHT 364
GG S +T G L G+G G+ G G +D P + SL + ++ VA +G H
Sbjct: 4089 GGEQSLFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHC 4148
Query: 365 ICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
+ ++++G+VYA + P+L++ L + ++CG+ H+A I
Sbjct: 4149 LALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVE--HLNGMSVADIACGSAHSAAITAS 4206
Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
G V WG +YG+LG GD D+ P V + G ++ACG
Sbjct: 4207 GHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACG 4248
Score = 181 (68.8 bits), Expect = 4.8e-15, Sum P(3) = 4.8e-15
Identities = 51/176 (28%), Positives = 82/176 (46%)
Query: 302 VKGIAC--GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAA 359
VK +A GG+H+ +T G + ++G G G+ G G+ P V +L +I VA
Sbjct: 3073 VKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVAC 3132
Query: 360 GLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGAR--H 417
G H+ ISS G++Y + + P+L+ A + V V+CG+R
Sbjct: 3133 GSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRV--VQVACGSRDAQ 3190
Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
T + +DG VF WG +G+LG G + P ++ + G + CG +L L
Sbjct: 3191 TLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLAL 3246
Score = 171 (65.3 bits), Expect = 1.5e-15, Sum P(3) = 1.5e-15
Identities = 58/206 (28%), Positives = 88/206 (42%)
Query: 274 SYGKDRSAALSRGSVNSE-GPGF--RVPGNYVKGIACGG--RHSAVITDAGALLTFGWGL 328
++GK R L G + P + G IACG + ITD + ++G G
Sbjct: 4211 TWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD 4270
Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXX 388
YG+ G+G +D P + SL G+ + V G ++ ++ G VY
Sbjct: 4271 YGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGS 4330
Query: 389 DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNI 448
P+ + A L+ S++ G+ H +D G+V+ WG N GQLG G V
Sbjct: 4331 VDHVRRPKKVAA--LQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQR 4388
Query: 449 PSQVT-IEGCVPRNVACGWWHTLLLA 473
P V ++G V CG HTL L+
Sbjct: 4389 PRLVAALQGKHIVKVTCGSAHTLALS 4414
Score = 166 (63.5 bits), Expect = 5.3e-15, Sum P(3) = 5.3e-15
Identities = 46/170 (27%), Positives = 76/170 (44%)
Query: 301 YVKGIAC--GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
+VK +A GG+H +T G + +G G G+ G G+ P V L G+ + +A
Sbjct: 4135 FVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIA 4194
Query: 359 AGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGA--R 416
G H+ I++ G V + + P+L++A L + ++CG+
Sbjct: 4195 CGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEA--LLGYRAIDIACGSGDA 4252
Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
T I DD V+ WG YG+LG G +P ++ ++ G V CG
Sbjct: 4253 QTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECG 4302
Score = 159 (61.0 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 53/196 (27%), Positives = 93/196 (47%)
Query: 274 SYGKDRSAALSRGSVNSEGPGFRVPG---NYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
S+G L G ++ ++ + V+ + CG +SA IT G LLT+G G Y
Sbjct: 639 SWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYA 698
Query: 331 QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAXXXXXXXXXXXXX 388
+ G G++DD P V +L + VA G H++ ++S+G V+A
Sbjct: 699 RLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGN 758
Query: 389 DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNI 448
P L++ SL V + V G++ + ++ +G+++ WG K LG +++R++
Sbjct: 759 CNGSLQPILVE--SLPRV--QRVFAGSQFSVALSSEGQLYTWG--KATCLG-HQLVERSV 811
Query: 449 PSQVTIEGC-VPRNVA 463
+GC VPR V+
Sbjct: 812 ------QGCSVPRLVS 821
Score = 141 (54.7 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 38/136 (27%), Positives = 62/136 (45%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
+ G HS +T G + +G G YG+ G G+ + L P V SL +Q V AG +
Sbjct: 727 LGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPRVQ--RVFAGSQFS 784
Query: 365 ICISSDGDVYAXXXXXXXXXXXXXDQAE--TLPRLLDAPSLENVHSKSVSCGARHTAVIA 422
+ +SS+G +Y + ++PRL+ SL++ V+ H ++
Sbjct: 785 VALSSEGQLYTWGKATCLGHQLVERSVQGCSVPRLVS--SLQHKRIVDVAVSVAHCLALS 842
Query: 423 DDGKVFCWGWNKYGQL 438
G+VF WG N Q+
Sbjct: 843 SSGEVFGWGRNDSQQI 858
Score = 137 (53.3 bits), Expect = 8.4e-12, Sum P(3) = 8.4e-12
Identities = 44/159 (27%), Positives = 75/159 (47%)
Query: 319 GALLTFGWGLY--GQCG--QGSTDDELSP-NCVSSLLGIQIEGVAAGLWHTICISSDGDV 373
GA +GWG GQ G +GS +P +S L +Q+ G L+ ++ DG +
Sbjct: 4047 GASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLF---AVTPDGKL 4103
Query: 374 YAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSK--SVSCGARHTAVIADDGKVFCWG 431
+A + +P LL SL++V K +V+ G +H + +G+V+ WG
Sbjct: 4104 FATGYGSGGRLGVGGSDSWAIPTLLG--SLQHVFVKKVAVNSGGKHCLALTTEGEVYAWG 4161
Query: 432 WNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHT 469
+ G+LG G+ + + P V + G ++ACG H+
Sbjct: 4162 EGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHS 4200
Score = 132 (51.5 bits), Expect = 3.0e-11, Sum P(3) = 3.0e-11
Identities = 43/148 (29%), Positives = 62/148 (41%)
Query: 274 SYGKDRSAALSRG-SVNSEGPGF--RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
S+G L RG S S+ P R+ G V I CG + S +T AG + T+G G Y
Sbjct: 3202 SWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYY 3261
Query: 331 QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQ 390
+ G G P + L G ++ VA G H + ++ G VYA
Sbjct: 3262 RLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTF 3321
Query: 391 AETLPRLLDAPSLENVHSKSVSCGARHT 418
P L+ L+ V V+CG+ H+
Sbjct: 3322 VNKKPALVIG--LDAVFVNRVACGSSHS 3347
Score = 115 (45.5 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 38/129 (29%), Positives = 54/129 (41%)
Query: 346 VSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLEN 405
+S L I I G + L+ +S DG VYA LP L
Sbjct: 3016 ISRLRPIHIAGGSKSLF---IVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLRQYV 3072
Query: 406 VHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVAC 464
V +V G +H + DGKVF WG + G+LG G+ + P V + R+VAC
Sbjct: 3073 VKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVAC 3132
Query: 465 GWWHTLLLA 473
G H+ ++
Sbjct: 3133 GSSHSAAIS 3141
Score = 113 (44.8 bits), Expect = 2.1e-21, Sum P(3) = 2.1e-21
Identities = 25/72 (34%), Positives = 34/72 (47%)
Query: 53 GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHG-EIPEPFPLPTEASIVKAAAGWAHCV 111
G F++A+S +L TWG LG V G +P IV A AHC+
Sbjct: 780 GSQFSVALSSEGQLYTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCL 839
Query: 112 AVTEGGEVYTWG 123
A++ GEV+ WG
Sbjct: 840 ALSSSGEVFGWG 851
Score = 110 (43.8 bits), Expect = 2.4e-19, Sum P(3) = 2.4e-19
Identities = 25/74 (33%), Positives = 39/74 (52%)
Query: 54 CG--FAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAH 109
CG F++A++ + ++ TWG D LG +H P+P ++ A G H
Sbjct: 3238 CGAQFSLALTRAGEVWTWGKGDYYRLGHG---GDQHVRKPQPIGGLRGRRVIHVAVGALH 3294
Query: 110 CVAVTEGGEVYTWG 123
C+AVT+ G+VY WG
Sbjct: 3295 CLAVTDAGQVYAWG 3308
Score = 99 (39.9 bits), Expect = 8.4e-08, Sum P(3) = 8.4e-08
Identities = 30/99 (30%), Positives = 45/99 (45%)
Query: 274 SYGKDRSAALSRGSVNSEGPGFRVP---GNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
++GK L GSV+ +V G + IA G H +D+G + T+G G
Sbjct: 4317 TWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEG 4376
Query: 331 QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISS 369
Q G G+ P V++L G I V G HT+ +S+
Sbjct: 4377 QLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALST 4415
Score = 94 (38.1 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 25/77 (32%), Positives = 35/77 (45%)
Query: 50 CGGGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHG-EIPEPFPLPTEASIVKAAAG 106
CG G + I+D + +WG D LG+ G G ++P +VK G
Sbjct: 4247 CGSGDAQTLCITDDDNVWSWGDGDYGKLGRG----GSDGCKLPYKIESLAGLGVVKVECG 4302
Query: 107 WAHCVAVTEGGEVYTWG 123
VA+T+ G VYTWG
Sbjct: 4303 SQFSVALTKSGAVYTWG 4319
Score = 91 (37.1 bits), Expect = 1.7e-06, Sum P(4) = 1.7e-06
Identities = 29/95 (30%), Positives = 41/95 (43%)
Query: 274 SYGKDRSAALSRGS---VNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
++GK L G V P + G V +A G H +TDAG + +G +G
Sbjct: 3254 TWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHG 3313
Query: 331 QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTI 365
Q G G+T P V L + + VA G H+I
Sbjct: 3314 QQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSI 3348
Score = 89 (36.4 bits), Expect = 6.2e-19, Sum P(3) = 6.2e-19
Identities = 37/119 (31%), Positives = 55/119 (46%)
Query: 24 LPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDD--LGQSYVT 81
LP + P+L VV+ + V S GG A+A++ K+ +WG +D LG T
Sbjct: 3061 LPHQLPVLRQYVVK-KVAVHS------GGK--HALALTLDGKVFSWGEGEDGKLGHGNRT 3111
Query: 82 SGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRV-FGDLST 139
+ + E I A G +H A++ GE+YTWG E GR+ GD +T
Sbjct: 3112 TLDKPRLVEAL---RAKKIRDVACGSSHSAAISSQGELYTWGLGEY---GRLGHGDNTT 3164
Score = 81 (33.6 bits), Expect = 1.1e-16, Sum P(3) = 1.1e-16
Identities = 18/74 (24%), Positives = 33/74 (44%)
Query: 50 CGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAH 109
CG +A+++ + +WG D G+ + + P + +V+ G
Sbjct: 3184 CGSRDAQTLALTEDGAVFSWGD-GDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQF 3242
Query: 110 CVAVTEGGEVYTWG 123
+A+T GEV+TWG
Sbjct: 3243 SLALTRAGEVWTWG 3256
Score = 79 (32.9 bits), Expect = 6.6e-18, Sum P(3) = 6.6e-18
Identities = 27/79 (34%), Positives = 39/79 (49%)
Query: 53 GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPT------EASIVKAA-- 104
GC ++ AI+ L+TWG G +Y G HG + LPT + +V A
Sbjct: 676 GCSYSAAITCGGNLLTWGR----G-TYARLG-HGNSDDR-SLPTLVVALSDHMVVDVALG 728
Query: 105 AGWAHCVAVTEGGEVYTWG 123
+G AH +A+T G V+ WG
Sbjct: 729 SGDAHSLALTSEGLVFAWG 747
Score = 79 (32.9 bits), Expect = 6.6e-18, Sum P(3) = 6.6e-18
Identities = 22/83 (26%), Positives = 42/83 (50%)
Query: 48 DVC-GGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGK-HGEIPEPFPLPTEASIVKAAA 105
DV G G ++A++ + WG D G+ + +G +G + +P + + + + A
Sbjct: 724 DVALGSGDAHSLALTSEGLVFAWGD-GDYGK--LGNGNCNGSL-QPILVESLPRVQRVFA 779
Query: 106 GWAHCVAVTEGGEVYTWGWKECV 128
G VA++ G++YTWG C+
Sbjct: 780 GSQFSVALSSEGQLYTWGKATCL 802
Score = 76 (31.8 bits), Expect = 6.6e-11, Sum P(2) = 6.6e-11
Identities = 29/99 (29%), Positives = 41/99 (41%)
Query: 49 VCGGGCGFAMAISDSRKLITWGSTDD--LGQSYVTSGKHGEIPEPFPLPTEASIVKAAAG 106
V GG +A++ ++ WG +D LG S ++ E S+ A G
Sbjct: 4141 VNSGG-KHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHL---NGMSVADIACG 4196
Query: 107 WAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDK 145
AH A+T G V TWG GR +G L G D+
Sbjct: 4197 SAHSAAITASGHVLTWG------KGR-YGRLGHGDSEDQ 4228
Score = 71 (30.1 bits), Expect = 4.3e-16, Sum P(2) = 4.3e-16
Identities = 25/76 (32%), Positives = 32/76 (42%)
Query: 52 GGCGFAMAISDSRKLIT--WGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA--AGW 107
GG A++ KL +GS LG V IP + K A +G
Sbjct: 4089 GGEQSLFAVTPDGKLFATGYGSGGRLG---VGGSDSWAIPTLLGSLQHVFVKKVAVNSGG 4145
Query: 108 AHCVAVTEGGEVYTWG 123
HC+A+T GEVY WG
Sbjct: 4146 KHCLALTTEGEVYAWG 4161
Score = 63 (27.2 bits), Expect = 2.8e-16, Sum P(3) = 2.8e-16
Identities = 15/67 (22%), Positives = 28/67 (41%)
Query: 58 MAISDSRKLITWGSTDDLGQSYVTSGKHGE-IPEPFPLPTEASIVKAAAGWAHCVAVTEG 116
+AI + +WG+ +D + H +P + + G ++ A+T G
Sbjct: 629 LAIDSNHNAYSWGTGEDHRLGH--GDTHARAVPTKIAALEQHCVQSVYCGCSYSAAITCG 686
Query: 117 GEVYTWG 123
G + TWG
Sbjct: 687 GNLLTWG 693
Score = 57 (25.1 bits), Expect = 2.1e-21, Sum P(3) = 2.1e-21
Identities = 16/37 (43%), Positives = 19/37 (51%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGR--HTLALSD 238
GD P LVT G R+ VA G R TLAL++
Sbjct: 3160 GDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTE 3196
Score = 47 (21.6 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 14/44 (31%), Positives = 19/44 (43%)
Query: 89 PEPFPLPTEA---SIVKAAAGWA---HCVAVTEGGEVYTWGWKE 126
PE PLP E + + AG H +A+ Y+WG E
Sbjct: 601 PEAEPLPMEEVAHDVFISIAGHCEGRHFLAIDSNHNAYSWGTGE 644
Score = 47 (21.6 bits), Expect = 6.6e-13, Sum P(3) = 6.6e-13
Identities = 16/61 (26%), Positives = 28/61 (45%)
Query: 87 EIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGW--KECVPSGRVFGDLSTGTGLD 144
++ P + +S AA G A++ G+V+ W W + C+ + RV L T L
Sbjct: 3885 QLDAALPATSSSSSSSAAPG-----AISSTGDVHKWAWFKRYCI-AVRVAQSLIRRTELP 3938
Query: 145 K 145
+
Sbjct: 3939 R 3939
Score = 47 (21.6 bits), Expect = 6.6e-13, Sum P(3) = 6.6e-13
Identities = 23/82 (28%), Positives = 36/82 (43%)
Query: 36 VRLPLTVGSA-WRDVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEP- 91
VR P +G R V G +A++D+ ++ WG D GQ SG +P
Sbjct: 3271 VRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDH-GQQ--GSGNTFVNKKPA 3327
Query: 92 FPLPTEASIV-KAAAGWAHCVA 112
+ +A V + A G +H +A
Sbjct: 3328 LVIGLDAVFVNRVACGSSHSIA 3349
Score = 45 (20.9 bits), Expect = 1.0e-12, Sum P(3) = 1.0e-12
Identities = 16/69 (23%), Positives = 29/69 (42%)
Query: 56 FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTE 115
+A++ + + WG + GQ G + P P + V+ A G AVT
Sbjct: 4041 WALSWGGASTIYGWGH-NHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTP 4099
Query: 116 GGEVYTWGW 124
G+++ G+
Sbjct: 4100 DGKLFATGY 4108
Score = 43 (20.2 bits), Expect = 5.8e-20, Sum P(3) = 5.8e-20
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 220 GVRIATVAAGGRHTLALSD 238
G R+ VA G H LA++D
Sbjct: 3282 GRRVIHVAVGALHCLAVTD 3300
Score = 41 (19.5 bits), Expect = 9.3e-20, Sum P(3) = 9.3e-20
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 221 VRIATVAAGGRHTLALS 237
V+ V +GG+H LAL+
Sbjct: 3073 VKKVAVHSGGKHALALT 3089
Score = 41 (19.5 bits), Expect = 2.8e-16, Sum P(3) = 2.8e-16
Identities = 17/45 (37%), Positives = 19/45 (42%)
Query: 193 LAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS 237
L Q E S G + P LV+ RI VA H LALS
Sbjct: 802 LGHQLVERSVQG----CSVPRLVSSLQHKRIVDVAVSVAHCLALS 842
Score = 40 (19.1 bits), Expect = 1.2e-19, Sum P(3) = 1.2e-19
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 221 VRIATVAAGGRHTLALS 237
V+ V +GG+H LAL+
Sbjct: 4136 VKKVAVNSGGKHCLALT 4152
Score = 40 (19.1 bits), Expect = 1.2e-19, Sum P(3) = 1.2e-19
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 203 SGDENLSAFPCLVTLNPGVRIATVAAGGRHTLA 235
SG+ ++ P LV V + VA G H++A
Sbjct: 3317 SGNTFVNKKPALVIGLDAVFVNRVACGSSHSIA 3349
Score = 40 (19.1 bits), Expect = 1.7e-06, Sum P(4) = 1.7e-06
Identities = 14/37 (37%), Positives = 16/37 (43%)
Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNK 434
LDA +L S S S A I+ G V W W K
Sbjct: 3886 LDA-ALPATSSSSSSSAA--PGAISSTGDVHKWAWFK 3919
>TAIR|locus:504956339 [details] [associations]
symbol:RUG1 "AT5G08710" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
EMBL:BT005498 EMBL:AK118882 IPI:IPI00533904 RefSeq:NP_680156.2
UniGene:At.45869 ProteinModelPortal:Q8GWF2 SMR:Q8GWF2 PRIDE:Q8GWF2
EnsemblPlants:AT5G08710.1 GeneID:830771 KEGG:ath:AT5G08710
TAIR:At5g08710 HOGENOM:HOG000006005 InParanoid:Q8GWF2 OMA:HSACIDE
PhylomeDB:Q8GWF2 ProtClustDB:CLSN2690903 Genevestigator:Q8GWF2
Uniprot:Q8GWF2
Length = 434
Score = 222 (83.2 bits), Expect = 5.3e-21, Sum P(2) = 5.3e-21
Identities = 61/218 (27%), Positives = 100/218 (45%)
Query: 275 YGKDRSAALSRGSVNSEGPGFRVP-------GNYVKGIACGGRHSAVITDAGALLTFGWG 327
+GK+ S L G + RVP G ++ +A G HS +TD G +L++G G
Sbjct: 158 WGKNSSGQLGLGKKAARV--VRVPTKVEALHGITIQSVALGSEHSVAVTDGGEVLSWGGG 215
Query: 328 LYGQCGQGS---------TDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXX 378
G+ G G ++ E +P + L GI++ VAAGL H+ C +G +
Sbjct: 216 GSGRLGHGHQSSLFGILRSNSEFTPRLIKELEGIKVTNVAAGLLHSACTDENGSAFMFGE 275
Query: 379 XXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
+ T P ++ E +++ V+CG HT V+ G+++ WG N+ G L
Sbjct: 276 KSINKMGFGGVRNATTPSIIS----EVPYAEEVACGGYHTCVVTRGGELYTWGSNENGCL 331
Query: 439 GLGDVIDRNIPSQVT---IEGCVPRNVACGWWHTLLLA 473
G + P +V +E V + V+CGW HT ++
Sbjct: 332 GTDSTYVSHSPVRVEGPFLESTVSQ-VSCGWKHTAAIS 368
Score = 175 (66.7 bits), Expect = 4.2e-16, Sum P(3) = 4.2e-16
Identities = 54/184 (29%), Positives = 83/184 (45%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
G V +A G HSA + G+ FG + G G + +P+ +S + E VA
Sbjct: 248 GIKVTNVAAGLLHSACTDENGSAFMFGEKSINKMGFGGVRNATTPSIISEVP--YAEEVA 305
Query: 359 AGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
G +HT ++ G++Y P ++ P LE+ S+ VSCG +HT
Sbjct: 306 CGGYHTCVVTRGGELYTWGSNENGCLGTDSTYVSHSPVRVEGPFLESTVSQ-VSCGWKHT 364
Query: 419 AVIADDGKVFCWGW------------NKYGQLGLGDVIDRNIPSQVTIEGCVPR-NVACG 465
A I+D+ VF WGW + GQLG G +D P+ V + V +++CG
Sbjct: 365 AAISDNN-VFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYARPAMVDLGKNVRAVHISCG 423
Query: 466 WWHT 469
+ HT
Sbjct: 424 FNHT 427
Score = 156 (60.0 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 48/172 (27%), Positives = 79/172 (45%)
Query: 304 GIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
G+ C V +++G WG YG+ G G+ D + +P S+L I VA G
Sbjct: 35 GVCCS---RWVSSESGKRFAAMWGSGDYGRLGLGNLDSQWTPAVCSALSDHSITAVACGG 91
Query: 362 WHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
HT+ ++ V+A ++ + L + L+ +S G H+A I
Sbjct: 92 AHTLFLTETRRVFATGLNDCGQLGVSDVKSHAMDPL-EVSGLDK-DILHISAGYYHSAAI 149
Query: 422 ADDGKVFCWGWNKYGQLGLGDVIDR--NIPSQV-TIEGCVPRNVACGWWHTL 470
DG+++ WG N GQLGLG R +P++V + G ++VA G H++
Sbjct: 150 TVDGELYMWGKNSSGQLGLGKKAARVVRVPTKVEALHGITIQSVALGSEHSV 201
Score = 152 (58.6 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 50/182 (27%), Positives = 81/182 (44%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ-GSTDDE---LSPNCVSSLLGIQIEGV 357
+ +ACGG H+ +T+ + F GL CGQ G +D + + P VS L I +
Sbjct: 84 ITAVACGGAHTLFLTETRRV--FATGL-NDCGQLGVSDVKSHAMDPLEVSGL-DKDILHI 139
Query: 358 AAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARH 417
+AG +H+ I+ DG++Y A + +L + +SV+ G+ H
Sbjct: 140 SAGYYHSAAITVDGELYMWGKNSSGQLGLGKKAARVVRVPTKVEALHGITIQSVALGSEH 199
Query: 418 TAVIADDGKVFCWGWNKYGQLGLGD------VIDRN---IPSQVT-IEGCVPRNVACGWW 467
+ + D G+V WG G+LG G ++ N P + +EG NVA G
Sbjct: 200 SVAVTDGGEVLSWGGGGSGRLGHGHQSSLFGILRSNSEFTPRLIKELEGIKVTNVAAGLL 259
Query: 468 HT 469
H+
Sbjct: 260 HS 261
Score = 113 (44.8 bits), Expect = 6.9e-09, Sum P(3) = 6.9e-09
Identities = 44/162 (27%), Positives = 62/162 (38%)
Query: 275 YGKDRSAALSRGSV-NSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCG 333
+G+ + G V N+ P Y + +ACGG H+ V+T G L T+G G G
Sbjct: 273 FGEKSINKMGFGGVRNATTPSIISEVPYAEEVACGGYHTCVVTRGGELYTWGSNENGCLG 332
Query: 334 QGSTDDELSPNCVSS-LLGIQIEGVAAGLWHTICIS-----------SDGDVYAXXXXXX 381
ST SP V L + V+ G HT IS S G
Sbjct: 333 TDSTYVSHSPVRVEGPFLESTVSQVSCGWKHTAAISDNNVFTWGWGGSHGTFSVDGHSSG 392
Query: 382 XXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
D P ++D +NV + +SCG HTA + +
Sbjct: 393 GQLGHGSDVDYARPAMVDLG--KNVRAVHISCGFNHTAAVLE 432
Score = 93 (37.8 bits), Expect = 4.2e-16, Sum P(3) = 4.2e-16
Identities = 31/91 (34%), Positives = 41/91 (45%)
Query: 39 PLTVGSAWRDVCGGGCGF--AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPT 96
PL V +D+ G+ + AI+ +L WG GQ + GK P
Sbjct: 126 PLEVSGLDKDILHISAGYYHSAAITVDGELYMWGKNSS-GQ--LGLGKKAARVVRVPTKV 182
Query: 97 EA----SIVKAAAGWAHCVAVTEGGEVYTWG 123
EA +I A G H VAVT+GGEV +WG
Sbjct: 183 EALHGITIQSVALGSEHSVAVTDGGEVLSWG 213
Score = 89 (36.4 bits), Expect = 5.3e-21, Sum P(2) = 5.3e-21
Identities = 33/120 (27%), Positives = 54/120 (45%)
Query: 8 EKMERVVFMWG---YLPGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSR 64
E +R MWG Y L +P V L+ S CGG + ++++R
Sbjct: 45 ESGKRFAAMWGSGDYGRLGLGNLDSQWTPAVCSA-LSDHSITAVACGGA--HTLFLTETR 101
Query: 65 KLITWGSTDDLGQSYVTSGKHGEIPEPFPLP-TEASIVKAAAGWAHCVAVTEGGEVYTWG 123
++ G +D GQ V+ K + +P + + I+ +AG+ H A+T GE+Y WG
Sbjct: 102 RVFATG-LNDCGQLGVSDVKSHAM-DPLEVSGLDKDILHISAGYYHSAAITVDGELYMWG 159
Score = 65 (27.9 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 29/111 (26%), Positives = 43/111 (38%)
Query: 52 GGCGFAMAISDSRKLIT--WGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAH 109
G C S+S K WGS D G+ + + P ++ SI A G AH
Sbjct: 35 GVCCSRWVSSESGKRFAAMWGS-GDYGRLGLGNLDSQWTPAVCSALSDHSITAVACGGAH 93
Query: 110 CVAVTEGGEVYTWGWKECVPSG------RVFGDLSTGTGLDKDVFERQSSF 154
+ +TE V+ G +C G L +GLDKD+ + +
Sbjct: 94 TLFLTETRRVFATGLNDCGQLGVSDVKSHAMDPLEV-SGLDKDILHISAGY 143
Score = 63 (27.2 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 35/141 (24%), Positives = 56/141 (39%)
Query: 14 VFMWGY-LPGALPQRSPILSPLVVRLPLTV----GSAWRDVCGGGCGFAMAISDSRKLIT 68
++MWG G L + VVR+P V G + V G ++A++D ++++
Sbjct: 155 LYMWGKNSSGQLGLGKK--AARVVRVPTKVEALHGITIQSVALGS-EHSVAVTDGGEVLS 211
Query: 69 WGS--TDDLGQSYVTS--G---KHGEIPEPFPLPTEA-SIVKAAAGWAHCVAVTEGGEVY 120
WG + LG + +S G + E E + AAG H E G +
Sbjct: 212 WGGGGSGRLGHGHQSSLFGILRSNSEFTPRLIKELEGIKVTNVAAGLLHSACTDENGSAF 271
Query: 121 TWGWKECVPSGRVFGDLSTGT 141
+G K G FG + T
Sbjct: 272 MFGEKSINKMG--FGGVRNAT 290
Score = 45 (20.9 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 223 IATVAAGGRHTLALSD 238
I VA GG HTL L++
Sbjct: 84 ITAVACGGAHTLFLTE 99
Score = 39 (18.8 bits), Expect = 4.2e-16, Sum P(3) = 4.2e-16
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSD 238
P L+ G+++ VAAG H+ A +D
Sbjct: 240 PRLIKELEGIKVTNVAAGLLHS-ACTD 265
>TAIR|locus:2146142 [details] [associations]
symbol:AT5G16040 "AT5G16040" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008536 "Ran GTPase binding" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688 EMBL:AL391145
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.19750
UniGene:At.49027 EMBL:BT028960 IPI:IPI00525887 PIR:T51387
RefSeq:NP_197108.1 HSSP:O87916 ProteinModelPortal:Q9LFS0 SMR:Q9LFS0
PRIDE:Q9LFS0 EnsemblPlants:AT5G16040.1 GeneID:831461
KEGG:ath:AT5G16040 TAIR:At5g16040 InParanoid:Q9LFS0 OMA:TTGHPME
PhylomeDB:Q9LFS0 ProtClustDB:CLSN2686124 Genevestigator:Q9LFS0
Uniprot:Q9LFS0
Length = 396
Score = 184 (69.8 bits), Expect = 1.0e-20, Sum P(4) = 1.0e-20
Identities = 47/172 (27%), Positives = 81/172 (47%)
Query: 286 GSVNSEGPGFRVPG-NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN 344
G + RV G V+ IA G H+ + + G L +G YGQ G G T P
Sbjct: 181 GDIKQISVPVRVQGLENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYPI 240
Query: 345 CVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQ--AETLPRLLDAPS 402
V L + + +AAG WH+ ++++G+VY + ++ LP+ ++ +
Sbjct: 241 PVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLA 300
Query: 403 LENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI 454
E++ VSCG H+ + DG++F +G +G+LG G + P ++ I
Sbjct: 301 GEDIIQ--VSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPI 350
Score = 174 (66.3 bits), Expect = 5.5e-17, Sum P(4) = 5.5e-17
Identities = 51/178 (28%), Positives = 80/178 (44%)
Query: 306 ACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE----------LSPNCVSSLLGIQIE 355
A GG H + D G +G YGQCG+ + DE + C L +
Sbjct: 97 AIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPSKDETGRPVRRDIVIPKRCAQQLT---VR 153
Query: 356 GVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGA 415
VAAG H++ ++ +G V+ ++P + LENV + ++ GA
Sbjct: 154 QVAAGGTHSVVLTREGYVWTWGQPWPPGDIKQI----SVP--VRVQGLENV--RLIAVGA 205
Query: 416 RHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
H + +DG ++ WG N+YGQLG GD R+ P V ++ ++A G WH+ L
Sbjct: 206 FHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVDIAAGGWHSTAL 263
Score = 166 (63.5 bits), Expect = 6.6e-10, Sum P(3) = 6.6e-10
Identities = 53/184 (28%), Positives = 81/184 (44%)
Query: 298 PGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDELSPNCVSSLLGIQIEG 356
P N V+ + G R+S I D G L T+GW G G T E +P+ V SL ++I
Sbjct: 37 PFN-VRSVVGGSRNSLAICDDGKLFTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQ 95
Query: 357 VAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAET---LPRLLDAPS--LENVHSKSV 411
A G WH + + G YA + ET + R + P + + + V
Sbjct: 96 AAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPSKDETGRPVRRDIVIPKRCAQQLTVRQV 155
Query: 412 SCGARHTAVIADDGKVFCWG--WNKYGQLGLGDVIDRNIPSQVTIEGCVP-RNVACGWWH 468
+ G H+ V+ +G V+ WG W GD+ ++P V ++G R +A G +H
Sbjct: 156 AAGGTHSVVLTREGYVWTWGQPWPP------GDIKQISVP--VRVQGLENVRLIAVGAFH 207
Query: 469 TLLL 472
L L
Sbjct: 208 NLAL 211
Score = 138 (53.6 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 42/167 (25%), Positives = 74/167 (44%)
Query: 315 ITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVY 374
+ A +++ +G G GQ G G+ +++ + V +L + V G +++ I DG ++
Sbjct: 1 MASATSVIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLF 60
Query: 375 AXXXXXXXXXXXXXD-QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWN 433
+ + E+ P L+ SL NV + G H + D G+ + WG N
Sbjct: 61 TWGWNQRGTLGHPPETKTESTPSLVK--SLANVKIVQAAIGGWHCLAVDDQGRAYAWGGN 118
Query: 434 KYGQLG---LGDVIDRNIPSQVTI-EGCVP----RNVACGWWHTLLL 472
+YGQ G D R + + I + C R VA G H+++L
Sbjct: 119 EYGQCGEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVL 165
Score = 115 (45.5 bits), Expect = 1.0e-20, Sum P(4) = 1.0e-20
Identities = 32/101 (31%), Positives = 41/101 (40%)
Query: 47 RDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAG 106
R V GG ++AI D KL TWG + K P IV+AA G
Sbjct: 41 RSVVGGSRN-SLAICDDGKLFTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIG 99
Query: 107 WAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDV 147
HC+AV + G Y WG E G TG + +D+
Sbjct: 100 GWHCLAVDDQGRAYAWGGNEYGQCGEEPSKDETGRPVRRDI 140
Score = 84 (34.6 bits), Expect = 9.0e-17, Sum P(3) = 9.0e-17
Identities = 31/120 (25%), Positives = 52/120 (43%)
Query: 14 VFMWGYLP-GAL---PQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITW 69
+F WG+ G L P+ +P +V+ V + G C +A+ D + W
Sbjct: 59 LFTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHC---LAVDDQGRAYAW 115
Query: 70 GSTD--DLGQ--SYVTSGK--HGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
G + G+ S +G+ +I P + ++ + AAG H V +T G V+TWG
Sbjct: 116 GGNEYGQCGEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTREGYVWTWG 175
Score = 80 (33.2 bits), Expect = 2.8e-18, Sum P(4) = 2.8e-18
Identities = 15/67 (22%), Positives = 34/67 (50%)
Query: 60 ISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEV 119
++ + +I WGS +D GQ + + + E+ ++ G + +A+ + G++
Sbjct: 1 MASATSVIAWGSGED-GQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKL 59
Query: 120 YTWGWKE 126
+TWGW +
Sbjct: 60 FTWGWNQ 66
Score = 52 (23.4 bits), Expect = 2.7e-06, Sum P(3) = 2.7e-06
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 299 GNYV-KGIACGGRHSAVITD 317
G ++ K +ACGGRH+ I +
Sbjct: 368 GKWIAKHVACGGRHTLAIVE 387
Score = 50 (22.7 bits), Expect = 2.8e-18, Sum P(4) = 2.8e-18
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSD 238
P LV V+I A GG H LA+ D
Sbjct: 82 PSLVKSLANVKIVQAAIGGWHCLAVDD 108
Score = 50 (22.7 bits), Expect = 2.7e-06, Sum P(3) = 2.7e-06
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 205 DENLSAFPCLVTLNPGVRIATVAAGGRHTLALS 237
D++ P V L G I V+ GG H++AL+
Sbjct: 286 DKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALT 318
Score = 48 (22.0 bits), Expect = 6.9e-06, Sum P(3) = 6.9e-06
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 408 SKSVSCGARHTAVIAD 423
+K V+CG RHT I +
Sbjct: 372 AKHVACGGRHTLAIVE 387
Score = 48 (22.0 bits), Expect = 5.3e-05, Sum P(3) = 5.3e-05
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 203 SGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSD 238
+GD ++P V + + +AAGG H+ AL++
Sbjct: 230 TGDTQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTN 265
Score = 48 (22.0 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 9/11 (81%), Positives = 10/11 (90%)
Query: 226 VAAGGRHTLAL 236
VA GGRHTLA+
Sbjct: 375 VACGGRHTLAI 385
Score = 41 (19.5 bits), Expect = 1.0e-20, Sum P(4) = 1.0e-20
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 458 VPRNVACGWWHTLLL 472
+ ++VACG HTL +
Sbjct: 371 IAKHVACGGRHTLAI 385
Score = 39 (18.8 bits), Expect = 1.0e-20, Sum P(4) = 1.0e-20
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 223 IATVAAGGRHTLALS 237
+ VAAGG H++ L+
Sbjct: 152 VRQVAAGGTHSVVLT 166
Score = 38 (18.4 bits), Expect = 4.4e-12, Sum P(3) = 4.4e-12
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 205 DENLSAFPCLVTLNPGVRIATVAAGGRHTLALSD 238
DE + L P + +V G R++LA+ D
Sbjct: 23 DEEKELASVVDALEP-FNVRSVVGGSRNSLAICD 55
>UNIPROTKB|F1N7C1 [details] [associations]
symbol:HERC6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
OMA:HIFAGTY EMBL:DAAA02017014 IPI:IPI00825680 UniGene:Bt.42179
Ensembl:ENSBTAT00000027362 NextBio:20874614 Uniprot:F1N7C1
Length = 1016
Score = 230 (86.0 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 58/169 (34%), Positives = 85/169 (50%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDELSPNCVSSLLGIQIEGVAAGLWH 363
+ACG HS +++ G + ++G +GQ G G + SP V SL GI + VAAG H
Sbjct: 133 VACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHH 192
Query: 364 TICISSDGDVYAXXXXXXXXXXXXXDQAETLP-RLLDAPSLENVHSKSVSCGARHTAVIA 422
+ +S G + + A + + +L+ + S+SCG +HTAV+
Sbjct: 193 SFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLT 252
Query: 423 DDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
DGKVF +G N YGQLG ++ P V IEG V + + CG HTL
Sbjct: 253 QDGKVFTFGDNSYGQLGHDPTAEKRGPQLVERIEGLVSQ-IDCGSDHTL 300
Score = 185 (70.2 bits), Expect = 6.9e-11, P = 6.9e-11
Identities = 50/182 (27%), Positives = 86/182 (47%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
GN + A G HS ++ G + + G GQ G+ T P + +L + + V+
Sbjct: 22 GNTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLNVALVS 81
Query: 359 AGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAET-LPRLLDAPSLENVHSKSVSCGARH 417
G H++ + G V+A + T +P+ + +L + V+CG H
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIK--TLAGIKIIQVACGHYH 139
Query: 418 TAVIADDGKVFCWGWNKYGQLGLG-DVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLAVP 475
+ +++DG+VF WG N +GQLGLG + + P +V ++EG VA G H+ L++
Sbjct: 140 SVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLS 199
Query: 476 PT 477
T
Sbjct: 200 GT 201
Score = 181 (68.8 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 57/209 (27%), Positives = 94/209 (44%)
Query: 274 SYGKDRSAALSR-GSVNSEGPGFRVPGNYVKGIA---CGGRHSAVITDAGALLTFGWGLY 329
S G + L R G+ E P R+P +A CG HS + G + +G
Sbjct: 46 SCGDNSRGQLGRKGTPRGEQPE-RIPALETLNVALVSCGKEHSLAVCHKGRVFAWGAASE 104
Query: 330 GQCGQGS-TDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXX 388
GQ G G + P + +L GI+I VA G +H++ +S DG V++
Sbjct: 105 GQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGK 164
Query: 389 D-QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL-GD--VI 444
+ ++ P+ + SLE + V+ G H+ ++ G F WG N GQL L G+ +
Sbjct: 165 EFPSQASPQRVR--SLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPV 222
Query: 445 DRNIPSQV-TIEGCVPRNVACGWWHTLLL 472
R P + ++ +++CG+ HT +L
Sbjct: 223 QRYKPVSIGALKTLGVVSISCGYKHTAVL 251
Score = 118 (46.6 bits), Expect = 9.5e-10, Sum P(3) = 9.5e-10
Identities = 34/116 (29%), Positives = 53/116 (45%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
V I+CG +H+AV+T G + TFG YGQ G T ++ P V + G+ + + G
Sbjct: 238 VVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVERIEGL-VSQIDCGS 296
Query: 362 WHTIC-ISSDGDVYAXXXXXXXXXXXXXDQAET--LPRLLDAPSLENVHSKSVSCG 414
HT+ I + G V + AE+ + L+ A L +V K + G
Sbjct: 297 DHTLAYIYTTGQVVSFGRGPGCASRSPHPGAESSDISCLVSAKDLADVQVKHIFAG 352
Score = 91 (37.1 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 21/73 (28%), Positives = 37/73 (50%)
Query: 54 CG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGE-IPEPFPLPTEASIVKAAAGWAHC 110
CG ++A+ ++ WG+ + GQ + K IP+ I++ A G H
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAASE-GQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHS 140
Query: 111 VAVTEGGEVYTWG 123
VA++E G+V++WG
Sbjct: 141 VALSEDGQVFSWG 153
Score = 78 (32.5 bits), Expect = 4.2e-20, Sum P(3) = 4.2e-20
Identities = 26/85 (30%), Positives = 35/85 (41%)
Query: 47 RDVCGGGCGFAMAISD---SRKLITWGSTDDLGQ-SYVTSGK----HGEIPEPFPLPTEA 98
R VC GG A S S L++ G+ G S G+ GE PE P
Sbjct: 16 RQVCAGGNTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETL 75
Query: 99 SIVKAAAGWAHCVAVTEGGEVYTWG 123
++ + G H +AV G V+ WG
Sbjct: 76 NVALVSCGKEHSLAVCHKGRVFAWG 100
Score = 59 (25.8 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 17/76 (22%), Positives = 35/76 (46%)
Query: 54 CGF--AMAISDSRKLITWGSTDD----LGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGW 107
CG ++A+S+ ++ +WG+ LG+ + + + +P + + AAG
Sbjct: 135 CGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIP----LAQVAAGG 190
Query: 108 AHCVAVTEGGEVYTWG 123
H A++ G + WG
Sbjct: 191 HHSFALSLSGTSFGWG 206
Score = 58 (25.5 bits), Expect = 9.5e-10, Sum P(3) = 9.5e-10
Identities = 14/28 (50%), Positives = 17/28 (60%)
Query: 210 AFPCLVTLNPGVRIATVAAGGRHTLALS 237
A P V G+ +A VAAGG H+ ALS
Sbjct: 170 ASPQRVRSLEGIPLAQVAAGGHHSFALS 197
Score = 47 (21.6 bits), Expect = 4.2e-20, Sum P(3) = 4.2e-20
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 220 GVRIATVAAGGRHTLALSD 238
G++I VA G H++ALS+
Sbjct: 127 GIKIIQVACGHYHSVALSE 145
Score = 44 (20.5 bits), Expect = 8.2e-16, Sum P(2) = 8.2e-16
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 196 QTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLAL 236
Q + E P L TLN +A V+ G H+LA+
Sbjct: 54 QLGRKGTPRGEQPERIPALETLN----VALVSCGKEHSLAV 90
>UNIPROTKB|J9NWD8 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR017986 InterPro:IPR000569
InterPro:IPR001680 InterPro:IPR003877 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00622 PROSITE:PS50082 PROSITE:PS50237
PROSITE:PS50294 SMART:SM00119 SMART:SM00320 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016567 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 SUPFAM:SSF56204 GeneTree:ENSGT00700000104312
EMBL:AAEX03016202 Ensembl:ENSCAFT00000042764 Uniprot:J9NWD8
Length = 4118
Score = 253 (94.1 bits), Expect = 4.2e-20, Sum P(2) = 4.2e-20
Identities = 64/177 (36%), Positives = 95/177 (53%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
G V ++CG +HSAV+T G L TFG G YG+ G G+T ++ P V++L G QI VA
Sbjct: 3390 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVA 3449
Query: 359 AGLWHTICISSDGD-VYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARH 417
GL HT+ +S+DG V+A A++ P+ +D L + K V+CG +
Sbjct: 3450 CGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDV--LCGIGIKKVACGTQF 3507
Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACGWWHTLLLA 473
+ + DG V+ +G ++ L G + N P Q+ + G V +VA G HTL LA
Sbjct: 3508 SVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALA 3564
Score = 238 (88.8 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 60/203 (29%), Positives = 99/203 (48%)
Query: 275 YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
+G R L+ N P + + + CG + VI G +L G G YG+ GQ
Sbjct: 3259 WGAGRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQ 3318
Query: 335 GSTDDELSPNCVSSLLGIQIEGVAAGLW---HTICISSDGDVYAXXXXXXXXXXXXXDQA 391
G++DD +S+L G + + H++ ++ G+V++
Sbjct: 3319 GNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDR 3378
Query: 392 ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
+ PR ++A E V +SCG +H+AV+ DGK+F +G YG+LGLG+ ++ +P +
Sbjct: 3379 QRRPRQIEALQGEEV--VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPER 3436
Query: 452 VT-IEGCVPRNVACGWWHTLLLA 473
VT +EG VACG HTL ++
Sbjct: 3437 VTALEGYQIGQVACGLNHTLAVS 3459
Score = 229 (85.7 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 64/208 (30%), Positives = 96/208 (46%)
Query: 274 SYGKDRSAALSRGSVNSEGPGFRVP---GNYVKGIACGGRHS-AVITDAGALLTFGWGLY 329
++G L G+ +++ RV G + +ACG H+ AV D + FG G Y
Sbjct: 3414 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 3473
Query: 330 GQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXD 389
G+ G G++ + SP V L GI I+ VA G ++ ++ DG VY
Sbjct: 3474 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 3533
Query: 390 QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIP 449
+ P+ + P L V + V+ GA HT +A G V+ WG N GQLGLG P
Sbjct: 3534 RNHNRPQQI--PVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREP 3591
Query: 450 SQVTI-EGCVPRNVACGWWHTLLLAVPP 476
+ VT+ +G R ++ G H+ PP
Sbjct: 3592 TLVTVLQGKNIRQISAGRCHSAAWTAPP 3619
Score = 84 (34.6 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 26/101 (25%), Positives = 47/101 (46%)
Query: 50 CGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAH 109
CG G +MA+++S ++ +WG D G+ + P +V+ + G+ H
Sbjct: 3345 CGSD-GHSMALTESGEVFSWGD-GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKH 3402
Query: 110 CVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFER 150
VT G+++T+G +G +G L G +K + ER
Sbjct: 3403 SAVVTSDGKLFTFG------NGD-YGRLGLGNTSNKKLPER 3436
Score = 73 (30.8 bits), Expect = 4.2e-20, Sum P(2) = 4.2e-20
Identities = 27/112 (24%), Positives = 45/112 (40%)
Query: 14 VFMWGY-LPGALPQRSP-ILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGS 71
V++WG G L + ++ P P + A + +CG C F + + + GS
Sbjct: 3256 VYLWGAGRHGQLAEAGRNVMVPAAA--P-SFSQAQQVICGQNCTFVIQANGTVLACGEGS 3312
Query: 72 TDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
LGQ + +V + H +A+TE GEV++WG
Sbjct: 3313 YGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWG 3364
Score = 38 (18.4 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 220 GVRIATVAAGGRHTLA 235
G+ I ++AG H+LA
Sbjct: 24 GIAIQQISAGTSHSLA 39
>MGI|MGI:1914595 [details] [associations]
symbol:Herc4 "hect domain and RLD 4" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA;TAS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0006464 "cellular protein modification process"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0016567 "protein ubiquitination" evidence=TAS] [GO:0016874
"ligase activity" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 MGI:MGI:1914595 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005634 GO:GO:0005737 GO:GO:0030154
GO:GO:0007283 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 HOVERGEN:HBG050878 HSSP:Q9UEP9
CTD:26091 KO:K10615 EMBL:AK009436 EMBL:AK143111 EMBL:AK145735
EMBL:AK147723 EMBL:BC026855 EMBL:BC043082 EMBL:BC047157
EMBL:BC060033 IPI:IPI00453903 IPI:IPI00554980 IPI:IPI00828240
RefSeq:NP_080377.2 RefSeq:NP_084390.1 UniGene:Mm.234437
UniGene:Mm.422789 UniGene:Mm.441725 UniGene:Mm.487274
ProteinModelPortal:Q6PAV2 SMR:Q6PAV2 STRING:Q6PAV2
PhosphoSite:Q6PAV2 PaxDb:Q6PAV2 PRIDE:Q6PAV2
Ensembl:ENSMUST00000020258 GeneID:67345 KEGG:mmu:67345
UCSC:uc007fka.2 UCSC:uc007fkc.2 UCSC:uc007fkd.2 InParanoid:Q6PAV2
OMA:KLVIQPT OrthoDB:EOG44XJG1 NextBio:324318 Bgee:Q6PAV2
CleanEx:MM_HERC4 Genevestigator:Q6PAV2 Uniprot:Q6PAV2
Length = 1057
Score = 220 (82.5 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 58/176 (32%), Positives = 87/176 (49%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLY--GQCG-QGSTDDELSPNCVSSLLGIQIEGVA 358
+ +ACG H+ + D G + + WGL GQ G QGS + P + SL IQI VA
Sbjct: 86 IVAVACGEAHTLALNDKGQV--YAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 359 AGLWHTICISSDGDVYAXXXXXXXXXXXXXD-QAETLPRLLDAPSLENVHSKSVSCGARH 417
G +H++ +S +V+ D Q +T P+L+ SL + V+ G H
Sbjct: 144 CGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIK--SLLGIPFMQVAAGGAH 201
Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLL 472
+ V+ G +F WG NK+GQLGL D DR +P+ + ++ + CG HT L
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257
Score = 209 (78.6 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 55/176 (31%), Positives = 84/176 (47%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
V+ + CG RH+ + D G + T G GQ G + + P V +L I VA G
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVACGE 93
Query: 362 WHTICISSDGDVYA-XXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
HT+ ++ G VYA ++ +PR + SL ++ V+CG H+
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLA 151
Query: 421 IADDGKVFCWGWNKYGQLGLG-DVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLAV 474
++ +VFCWG NKYGQLGLG D + P + ++ G VA G H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL 207
Score = 203 (76.5 bits), Expect = 9.6e-18, Sum P(3) = 9.6e-18
Identities = 53/167 (31%), Positives = 75/167 (44%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDELSPNCVSSLLGIQIEGVAAGLWH 363
+ACG HS ++ A + +G YGQ G G + SP + SLLGI VAAG H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAH 201
Query: 364 TICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
+ ++ G ++ + +P LL SL + + CG HTA +
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTK 259
Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
+G VF +G YGQLG P +V + G + VACG HT
Sbjct: 260 EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHT 306
Score = 181 (68.8 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 52/160 (32%), Positives = 78/160 (48%)
Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXX 378
+L +G YGQ G G D+E L P + ++ V GL HT+ + DG VY
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 379 XXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
+++ P + A +N+ +V+CG HT + D G+V+ WG + GQL
Sbjct: 61 NDLGQLGH--EKSRKKPEQVVALDAQNI--VAVACGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 439 GL-GDV----IDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
GL G + RNI S I+ V VACG++H+L L+
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQ-IV--QVACGYYHSLALS 153
Score = 179 (68.1 bits), Expect = 3.6e-15, Sum P(3) = 3.6e-15
Identities = 48/155 (30%), Positives = 72/155 (46%)
Query: 305 IACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
+A GG HS V+T +GA+ FGWG +GQ G +D PN + SL +I + G
Sbjct: 195 VAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGED 252
Query: 363 HTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVI 421
HT ++ +G V+ E PR + L V+CG +HT A +
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF--ELMGSIVTQVACGRQHTSAFV 310
Query: 422 ADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEG 456
G+++ +G GQLG G +R P T++G
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSP--FTVKG 343
Score = 100 (40.3 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 26/74 (35%), Positives = 38/74 (51%)
Query: 274 SYGKDRSAALSRGSVNSE-GPG--FRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLY 329
++G L S + E P F + G+ V +ACG +H SA + +G + +FG G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGN 324
Query: 330 GQCGQGSTDDELSP 343
GQ G GST + SP
Sbjct: 325 GQLGTGSTSNRKSP 338
Score = 92 (37.4 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 21/80 (26%), Positives = 41/80 (51%)
Query: 47 RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHG-EIPEPFPLPTEASIVKA 103
+++ CG A +A++D ++ WG D GQ + + +P ++ IV+
Sbjct: 84 QNIVAVACGEAHTLALNDKGQVYAWGLDSD-GQLGLQGSEECIRVPRNIKSLSDIQIVQV 142
Query: 104 AAGWAHCVAVTEGGEVYTWG 123
A G+ H +A+++ EV+ WG
Sbjct: 143 ACGYYHSLALSKASEVFCWG 162
Score = 91 (37.1 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 32/96 (33%), Positives = 44/96 (45%)
Query: 30 ILSPLVVRLPLTVGSAWRDVCGGGCGF--AMAISDSRKLITWGSTDDLGQSYVTSGKHGE 87
+L P R V RDV GCG + + D + T G +DLGQ + K +
Sbjct: 22 VLEPR--RSDFFVNKKVRDV---GCGLRHTVFVLDDGTVYTCGC-NDLGQ--LGHEKSRK 73
Query: 88 IPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
PE +IV A G AH +A+ + G+VY WG
Sbjct: 74 KPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWG 109
Score = 68 (29.0 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 28/116 (24%), Positives = 48/116 (41%)
Query: 14 VFMWGY-LPGALPQRSPILSPLVVRLPLTVGSAWR-DVCGGGCGF--AMAISDSRKLITW 69
V+ WG G L + S +R+P + S + CG+ ++A+S + ++ W
Sbjct: 105 VYAWGLDSDGQLGLQG---SEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCW 161
Query: 70 GSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
G LG + K P+ ++ AAG AH +T G ++ WG
Sbjct: 162 GQNKYGQLGLG-IDCQKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWG 215
Score = 48 (22.0 bits), Expect = 5.1e-15, Sum P(2) = 5.1e-15
Identities = 14/35 (40%), Positives = 15/35 (42%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSD 238
G E P V I VA G HTLAL+D
Sbjct: 67 GHEKSRKKPEQVVALDAQNIVAVACGEAHTLALND 101
Score = 44 (20.5 bits), Expect = 3.6e-15, Sum P(3) = 3.6e-15
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 212 PCLVTLNPGVRIATVAAGGRHTLALS 237
P L+ G+ VAAGG H+ L+
Sbjct: 181 PQLIKSLLGIPFMQVAAGGAHSFVLT 206
Score = 43 (20.2 bits), Expect = 9.6e-18, Sum P(3) = 9.6e-18
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS 237
G E P + ++I VA G H+LALS
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
Score = 38 (18.4 bits), Expect = 7.6e-06, Sum P(3) = 7.6e-06
Identities = 11/33 (33%), Positives = 15/33 (45%)
Query: 205 DENLSAFPCLVTLNPGVRIATVAAGGRHTLALS 237
DEN P L+ +I + G HT AL+
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYICCGEDHTAALT 258
>TAIR|locus:2076889 [details] [associations]
symbol:AT3G02510 "AT3G02510" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
[GO:0008536 "Ran GTPase binding" evidence=ISS] INTERPRO:IPR000408
Pfam:PF00415 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.20016
UniGene:At.41128 EMBL:AK227929 IPI:IPI00539921 RefSeq:NP_186900.3
UniGene:At.70614 ProteinModelPortal:Q0WSJ9 SMR:Q0WSJ9 PRIDE:Q0WSJ9
EnsemblPlants:AT3G02510.1 GeneID:821100 KEGG:ath:AT3G02510
TAIR:At3g02510 OMA:NGGVQCW PhylomeDB:Q0WSJ9 Genevestigator:Q2V3Z2
Uniprot:Q0WSJ9
Length = 393
Score = 184 (69.8 bits), Expect = 2.5e-19, Sum P(4) = 2.5e-19
Identities = 47/173 (27%), Positives = 81/173 (46%)
Query: 286 GSVNSEGPGFRVPG-NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN 344
G + RV G V+ IA G H+ + + G LL +G YGQ G G T P
Sbjct: 181 GDIKQISVPVRVQGLENVRLIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSHPV 240
Query: 345 CVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQ--AETLPRLLDAPS 402
V L + + +AAG WH+ ++ G+VY + ++ +P+ ++ +
Sbjct: 241 PVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLGDNDKSSKMVPQKVNLLA 300
Query: 403 LENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
E++ VSCG H+ + DG++F +G +G+LG G + P ++ I+
Sbjct: 301 EEDIIQ--VSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIK 351
Score = 170 (64.9 bits), Expect = 3.3e-15, Sum P(4) = 3.3e-15
Identities = 48/175 (27%), Positives = 79/175 (45%)
Query: 306 ACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLL-------GIQIEGVA 358
A GG H + D G +G YGQCG+ DE+ ++ + + VA
Sbjct: 97 AIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVA 156
Query: 359 AGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
AG H++ ++ +G V+ ++P + LENV + ++ GA H
Sbjct: 157 AGGTHSVVLTREGHVWTWGQPWPPGDIKQI----SVP--VRVQGLENV--RLIAVGAFHN 208
Query: 419 AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
+ +DG++ WG N+YGQLG GD + P V ++ ++A G WH+ L
Sbjct: 209 LALEEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHSTAL 263
Score = 154 (59.3 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 48/180 (26%), Positives = 76/180 (42%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCG-QGSTDDELSPNCVSSLLGIQIEGVAAG 360
V+ + G R+S I D G + T+GW G G Q T E P+ V +L ++I A G
Sbjct: 40 VRSVVSGSRNSLAICDDGTMFTWGWNQRGTLGHQPETKTENIPSRVKALANVKITQAAIG 99
Query: 361 LWHTICISSDGDVYAXXXXXXXXXXXX---XDQAETLPRLLDAPS--LENVHSKSVSCGA 415
WH + + G YA + + R + P + + V+ G
Sbjct: 100 GWHCLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGG 159
Query: 416 RHTAVIADDGKVFCWG--WNKYGQLGLGDVIDRNIPSQVTIEGCVP-RNVACGWWHTLLL 472
H+ V+ +G V+ WG W GD+ ++P V ++G R +A G +H L L
Sbjct: 160 THSVVLTREGHVWTWGQPWPP------GDIKQISVP--VRVQGLENVRLIAVGAFHNLAL 211
Score = 148 (57.2 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 46/165 (27%), Positives = 76/165 (46%)
Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCV-SSLLGIQIEGVAAGLWHTICISSDGDVYAX 376
A +++ +G G GQ G G T++E CV +L + V +G +++ I DG ++
Sbjct: 4 ATSIIAWGSGEDGQLGIG-TNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTW 62
Query: 377 XXXXXXXXXXXXD-QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKY 435
+ + E +P + A L NV + G H + D G+ + WG N+Y
Sbjct: 63 GWNQRGTLGHQPETKTENIPSRVKA--LANVKITQAAIGGWHCLAVDDQGRAYAWGGNEY 120
Query: 436 GQLG---LGDVIDRNIPSQVTI-EGCVP----RNVACGWWHTLLL 472
GQ G L D + R + + I + C P R VA G H+++L
Sbjct: 121 GQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVL 165
Score = 99 (39.9 bits), Expect = 2.5e-19, Sum P(4) = 2.5e-19
Identities = 28/82 (34%), Positives = 34/82 (41%)
Query: 47 RDVCGGGCGFAMAISDSRKLITWG--STDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
R V G ++AI D + TWG LG T K IP I +AA
Sbjct: 41 RSVVSGSRN-SLAICDDGTMFTWGWNQRGTLGHQPET--KTENIPSRVKALANVKITQAA 97
Query: 105 AGWAHCVAVTEGGEVYTWGWKE 126
G HC+AV + G Y WG E
Sbjct: 98 IGGWHCLAVDDQGRAYAWGGNE 119
Score = 76 (31.8 bits), Expect = 1.1e-15, Sum P(3) = 1.1e-15
Identities = 30/120 (25%), Positives = 49/120 (40%)
Query: 14 VFMWGYLP-GAL---PQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITW 69
+F WG+ G L P+ P V+ V + G C +A+ D + W
Sbjct: 59 MFTWGWNQRGTLGHQPETKTENIPSRVKALANVKITQAAIGGWHC---LAVDDQGRAYAW 115
Query: 70 GSTD--DLGQSYVTS--GK--HGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
G + G+ + G+ +I P + ++ + AAG H V +T G V+TWG
Sbjct: 116 GGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGHVWTWG 175
Score = 75 (31.5 bits), Expect = 5.3e-17, Sum P(4) = 5.3e-17
Identities = 16/61 (26%), Positives = 30/61 (49%)
Query: 66 LITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWK 125
+I WGS +D GQ + + + E S+ +G + +A+ + G ++TWGW
Sbjct: 7 IIAWGSGED-GQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWN 65
Query: 126 E 126
+
Sbjct: 66 Q 66
Score = 53 (23.7 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 9/15 (60%), Positives = 11/15 (73%)
Query: 303 KGIACGGRHSAVITD 317
K IACGGRH+ I +
Sbjct: 373 KSIACGGRHTLAIVE 387
Score = 52 (23.4 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 408 SKSVSCGARHTAVIAD 423
+KS++CG RHT I +
Sbjct: 372 AKSIACGGRHTLAIVE 387
Score = 51 (23.0 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 203 SGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSD 238
+GD ++ P V + + +AAGG H+ AL+D
Sbjct: 230 TGDTQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTD 265
Score = 45 (20.9 bits), Expect = 5.3e-17, Sum P(4) = 5.3e-17
Identities = 11/27 (40%), Positives = 13/27 (48%)
Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSD 238
P V V+I A GG H LA+ D
Sbjct: 82 PSRVKALANVKITQAAIGGWHCLAVDD 108
Score = 44 (20.5 bits), Expect = 2.5e-19, Sum P(4) = 2.5e-19
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 219 PGVRIATVAAGGRHTLALS 237
P + + VAAGG H++ L+
Sbjct: 148 PKLTVRQVAAGGTHSVVLT 166
Score = 42 (19.8 bits), Expect = 3.3e-12, Sum P(3) = 3.3e-12
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 204 GDENLSAFPCLV-TLNPGVRIATVAAGGRHTLALSD 238
G + C+V L P + +V +G R++LA+ D
Sbjct: 21 GTNEEKEWACVVEALEP-YSVRSVVSGSRNSLAICD 55
Score = 38 (18.4 bits), Expect = 2.5e-19, Sum P(4) = 2.5e-19
Identities = 6/13 (46%), Positives = 10/13 (76%)
Query: 460 RNVACGWWHTLLL 472
+++ACG HTL +
Sbjct: 373 KSIACGGRHTLAI 385
>FB|FBgn0035207 [details] [associations]
symbol:CG9153 species:7227 "Drosophila melanogaster"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS;IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 HSSP:Q05086 EMBL:AY128479 ProteinModelPortal:Q8MQN4
SMR:Q8MQN4 PaxDb:Q8MQN4 PRIDE:Q8MQN4 FlyBase:FBgn0035207
InParanoid:Q8MQN4 OrthoDB:EOG4WDBSR ChiTaRS:CG9153
ArrayExpress:Q8MQN4 Bgee:Q8MQN4 Uniprot:Q8MQN4
Length = 1058
Score = 204 (76.9 bits), Expect = 5.2e-19, Sum P(2) = 5.2e-19
Identities = 57/175 (32%), Positives = 82/175 (46%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNC---VSSLLGIQIEGVAAGL 361
IACG HS +T G L ++G +YGQ G S +D N +++LLGI + +A G
Sbjct: 148 IACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGG 207
Query: 362 WHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
H+ IS G V+ + + P L +L + + V+CG + +
Sbjct: 208 NHSFLISKSGAVFGWGRNNCGQLGLNDETNRSYPTQLK--TLRTLGVRFVACGDEFSVFL 265
Query: 422 ADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLAVP 475
++G VF G YGQLG G + +P V + G VACG HTL L VP
Sbjct: 266 TNEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLAL-VP 319
Score = 202 (76.2 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 53/165 (32%), Positives = 83/165 (50%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS--PNCVSSLLGIQIEGVAAGLW 362
I CG RHS ++D G +L++G GQ G +TD E+ P V L+ + +A G
Sbjct: 95 ICCGSRHSLALSDWGQVLSWGDNDCGQLGH-ATDKEIVQLPKVVRQLVTKTVVQIACGNN 153
Query: 363 HTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRL-LDAPSLENVHSKSVSCGARHTAVI 421
H++ ++S G++Y+ T L +L + +++CG H+ +I
Sbjct: 154 HSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLI 213
Query: 422 ADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
+ G VF WG N GQLGL D +R+ P+Q+ T+ R VACG
Sbjct: 214 SKSGAVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACG 258
Score = 174 (66.3 bits), Expect = 9.6e-17, Sum P(3) = 9.6e-17
Identities = 49/154 (31%), Positives = 75/154 (48%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS---PNCVSSLLGIQIEGVAAGL 361
IACGG HS +I+ +GA+ FGWG CGQ +DE + P + +L + + VA G
Sbjct: 203 IACGGNHSFLISKSGAV--FGWGR-NNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGD 259
Query: 362 WHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHT-AV 420
++ ++++G V+ E LPR++ L V+CG RHT A+
Sbjct: 260 EFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLAL 317
Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI 454
+ G+V+ +G GQLG +P QV I
Sbjct: 318 VPSRGRVYAFGLGSSGQLGTRSTKSLMLP-QVVI 350
Score = 160 (61.4 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 47/181 (25%), Positives = 79/181 (43%)
Query: 298 PGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGV 357
P V+ +ACG RH+ +T G + G Y Q G P + L I +
Sbjct: 38 PDTAVQQVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTKR--PLLIPELQDYVIIQI 95
Query: 358 AAGLWHTICISSDGDVYAXXXXXXXXXXXXXD-QAETLPRLLDAPSLENVHSKSVSCGAR 416
G H++ +S G V + D + LP+++ + V ++CG
Sbjct: 96 CCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTV--VQIACGNN 153
Query: 417 HTAVIADDGKVFCWGWNKYGQLGLG---DVIDRNIPSQVTIEGCVP-RNVACGWWHTLLL 472
H+ + G+++ WG N YGQLG+ D+ N P ++T +P +ACG H+ L+
Sbjct: 154 HSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLI 213
Query: 473 A 473
+
Sbjct: 214 S 214
Score = 150 (57.9 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 48/155 (30%), Positives = 72/155 (46%)
Query: 326 WGL--YGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXX 381
WG +GQ G G +DE L+P+ + ++ VA G HT+ +++ G VYA
Sbjct: 10 WGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSNDY 69
Query: 382 XXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
D P L+ P L++ + CG+RH+ ++D G+V WG N GQLG
Sbjct: 70 SQLGH--DLPTKRPLLI--PELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLG-- 123
Query: 442 DVIDRNIPS-QVTIEGCVPRNV---ACGWWHTLLL 472
D+ I + V + V ACG H+L L
Sbjct: 124 HATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLAL 158
Score = 147 (56.8 bits), Expect = 1.1e-13, Sum P(3) = 1.1e-13
Identities = 34/101 (33%), Positives = 50/101 (49%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
V+ +ACG S +T+ G + T G G YGQ G G + +E+ P V L+G I VA G
Sbjct: 252 VRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGN 311
Query: 362 WHTIC-ISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAP 401
HT+ + S G VYA ++ LP+++ P
Sbjct: 312 RHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVVIGP 352
Score = 104 (41.7 bits), Expect = 5.2e-19, Sum P(2) = 5.2e-19
Identities = 28/101 (27%), Positives = 53/101 (52%)
Query: 24 LPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQ-SYVTS 82
LP + P+L P + + +C G ++A+SD ++++WG +D GQ + T
Sbjct: 76 LPTKRPLLIPELQDYVII------QICCGS-RHSLALSDWGQVLSWGD-NDCGQLGHATD 127
Query: 83 GKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
+ ++P+ ++V+ A G H +A+T GE+Y+WG
Sbjct: 128 KEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWG 168
Score = 83 (34.3 bits), Expect = 7.2e-07, Sum P(3) = 7.2e-07
Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 299 GNYVKGIACGGRHS-AVITDAGALLTFGWGLYGQCGQGSTDDELSPNCV 346
G+ + +ACG RH+ A++ G + FG G GQ G ST + P V
Sbjct: 301 GSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVV 349
Score = 76 (31.8 bits), Expect = 9.9e-10, Sum P(2) = 9.9e-10
Identities = 29/99 (29%), Positives = 43/99 (43%)
Query: 35 VVRLPLTVGS-AWRDVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKH-GEIPE 90
+V+LP V + V CG ++A++ +L +WGS + GQ V S
Sbjct: 130 IVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGS-NIYGQLGVNSPNDLTHCNY 188
Query: 91 PFPLPTEASIVKAA--AGWAHCVAVTEGGEVYTWGWKEC 127
P L T I AA G H +++ G V+ WG C
Sbjct: 189 PLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNC 227
Score = 69 (29.3 bits), Expect = 3.4e-15, Sum P(3) = 3.4e-15
Identities = 26/102 (25%), Positives = 47/102 (46%)
Query: 30 ILSPLVVRLPLTVGSAWRDVCGGGCGF--AMAISDSRKLITWGSTDDLGQSYVTSGKHGE 87
IL+P ++P T +A + V CG + ++ + K+ GS D Y G
Sbjct: 28 ILTPS--QIPWTPDTAVQQVA---CGHRHTLFLTATGKVYACGSND-----YSQLGHDLP 77
Query: 88 IPEPFPLPT--EASIVKAAAGWAHCVAVTEGGEVYTWGWKEC 127
P +P + I++ G H +A+++ G+V +WG +C
Sbjct: 78 TKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDC 119
Score = 53 (23.7 bits), Expect = 9.6e-17, Sum P(3) = 9.6e-17
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 201 SSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS 237
+S D +P +T G+ +A +A GG H+ +S
Sbjct: 178 NSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLIS 214
Score = 49 (22.3 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 205 DENLSAFPCLVTLNPGVRIATVAAGGRHTLALS 237
DE + P + P + VA G RHTL L+
Sbjct: 25 DEQILT-PSQIPWTPDTAVQQVACGHRHTLFLT 56
Score = 47 (21.6 bits), Expect = 4.4e-13, Sum P(2) = 4.4e-13
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 223 IATVAAGGRHTLALSD 238
I + G RH+LALSD
Sbjct: 92 IIQICCGSRHSLALSD 107
Score = 39 (18.8 bits), Expect = 3.4e-15, Sum P(3) = 3.4e-15
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 205 DENLSAFPCLVTLNPGVRIATVAAGGRHTLALS 237
D+ + P +V + +A G H+LAL+
Sbjct: 127 DKEIVQLPKVVRQLVTKTVVQIACGNNHSLALT 159
>UNIPROTKB|E1BW48 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0020037
"heme binding" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0032183 "SUMO binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF00569 Pfam:PF06701 PROSITE:PS01357
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS51416
SMART:SM00119 SMART:SM00291 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005743 GO:GO:0046872 GO:GO:0008270
GO:GO:0006281 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 SUPFAM:SSF46934 Gene3D:2.30.30.30
InterPro:IPR021097 InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 OMA:QLAFTRD EMBL:AADN02017653
IPI:IPI00571031 Ensembl:ENSGALT00000027018 ArrayExpress:E1BW48
Uniprot:E1BW48
Length = 4841
Score = 210 (79.0 bits), Expect = 7.7e-19, Sum P(4) = 7.7e-19
Identities = 55/173 (31%), Positives = 82/173 (47%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
G V IA GG HSA IT AG L T+G G YG+ G G ++D+L P V +L G ++ +A
Sbjct: 4095 GIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIA 4154
Query: 359 AGLW--HTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGAR 416
G T+C++ D V++ +P +D SL ++ V CG++
Sbjct: 4155 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTDLGVVKVECGSQ 4212
Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWH 468
+ + G V+ WG Y +LG G P QV ++G +A G H
Sbjct: 4213 FSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4265
Score = 202 (76.2 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 52/177 (29%), Positives = 87/177 (49%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
G +V IACG +SA IT G L T+G G YG+ G GS++D+ P V+ L G+++ V+
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVS 610
Query: 359 AGLW--HTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGAR 416
G T+ ++ +G V++ P+L++ L+++ V CG++
Sbjct: 611 CGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE--KLQDLDIVKVRCGSQ 668
Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
+ + DG+V+ WG +LG G P + ++G +VA G H L L
Sbjct: 669 FSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLAL 725
Score = 178 (67.7 bits), Expect = 7.9e-15, Sum P(5) = 7.9e-15
Identities = 47/172 (27%), Positives = 82/172 (47%)
Query: 301 YVKGIAC--GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
++K +A GG+H ++ G + ++G G+ G G+ P + SL GI++ +A
Sbjct: 4043 FIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIA 4102
Query: 359 AGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGA--R 416
AG H+ CI++ GD++ + + P+L++A L+ ++CG+
Sbjct: 4103 AGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEA--LQGYRVIDIACGSGDA 4160
Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV---TIEGCVPRNVACG 465
T + DD V+ WG YG+LG G +P ++ T G V V CG
Sbjct: 4161 QTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTDLGVV--KVECG 4210
Score = 171 (65.3 bits), Expect = 9.7e-14, Sum P(3) = 9.7e-14
Identities = 57/209 (27%), Positives = 93/209 (44%)
Query: 270 CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYV-KGIAC--GGRHSAVITDAGALLTFGW 326
C E++ G+ +S G+V NYV K +A GGRH+ +T G + ++G
Sbjct: 3020 CGEATNGR-LGLGISSGTVPIPRQ-ITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGE 3077
Query: 327 GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXX 386
G G+ G S + P + +L +I +A G H+ I+S G++Y
Sbjct: 3078 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGH 3137
Query: 387 XXDQAETLPRLLDAPSLENVHSKSVSCGAR--HTAVIADDGKVFCWGWNKYGQLGLGDVI 444
+ + P+++ L V+CG+R T + D+G VF WG +G+LG G
Sbjct: 3138 GDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSE 3195
Query: 445 DRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
NIP + + G + CG +L L
Sbjct: 3196 GCNIPQNIERLNGQGVCQIECGAQFSLAL 3224
Score = 165 (63.1 bits), Expect = 1.2e-12, Sum P(4) = 1.2e-12
Identities = 46/175 (26%), Positives = 79/175 (45%)
Query: 299 GNYVKGIACGGR--HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG 356
G+ V +ACG R + +TD G + ++G G +G+ G+G ++ P + L G +
Sbjct: 3154 GHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQ 3213
Query: 357 VAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGAR 416
+ G ++ ++ G V+ D P++++ L V+ GA
Sbjct: 3214 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEG--LRGKKIVHVAVGAL 3271
Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
H + D G+V+ WG N +GQ G G P+ V +EG VACG H++
Sbjct: 3272 HCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3326
Score = 164 (62.8 bits), Expect = 1.5e-13, Sum P(4) = 1.5e-13
Identities = 56/205 (27%), Positives = 86/205 (41%)
Query: 274 SYGKDRSAALSRGSVNSE-GPGF--RVPGNYVKGIACGG--RHSAVITDAGALLTFGWGL 328
++GK R L G + P + G V IACG + +TD + ++G G
Sbjct: 4119 TWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 4178
Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXX 388
YG+ G+G +D P + SL + + V G ++ ++ G VY
Sbjct: 4179 YGKLGRGGSDGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS 4238
Query: 389 DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDG--KVFCWGWNKYGQLGLGDVIDR 446
D PR + L+ +++ G+ H +DG +V+ WG N GQLG G
Sbjct: 4239 DDHVRRPRQVQG--LQGKKVIAIATGSLHCVCCTEDGLGEVYTWGDNDEGQLGDGTTNAI 4296
Query: 447 NIPSQVT-IEGCVPRNVACGWWHTL 470
P V ++G VACG HTL
Sbjct: 4297 QRPRLVAALQGKKINRVACGSAHTL 4321
Score = 151 (58.2 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 43/146 (29%), Positives = 69/146 (47%)
Query: 334 QGSTDDELSPNCVSSLLGIQIEGVAAGL--WHTICISSDGDVYAXXXXXXXXXXXXXDQA 391
Q D L P V SL I +AA H + +S++G+V++
Sbjct: 476 QAYNSDTLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVP 535
Query: 392 ETLPRLLDAPSLENV--HSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIP 449
P+L+ A S + H ++CG+ ++A I +G+++ WG YG+LG G D+ IP
Sbjct: 536 LEEPKLISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIP 595
Query: 450 SQVT-IEGCVPRNVACGWWHTLLLAV 474
VT ++G +V+CG LAV
Sbjct: 596 MLVTGLKGLKVIDVSCGSGDAQTLAV 621
Score = 148 (57.2 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 48/202 (23%), Positives = 85/202 (42%)
Query: 274 SYGKDRSAALSRGSVNSEGPGFRVPGNYVKG-----IACGG--RHSAVITDAGALLTFGW 326
++G+ L GS + V G +KG ++CG + +T+ G + ++G
Sbjct: 575 TWGRGNYGRLGHGSSEDQTIPMLVTG--LKGLKVIDVSCGSGDAQTLAVTENGQVWSWGD 632
Query: 327 GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXX 386
G YG+ G+G +D +P + L + I V G +I ++ DG VY
Sbjct: 633 GDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGH 692
Query: 387 XXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR 446
++ P+LL+ L+ V+ G+ H + +D +V WG N Q D +
Sbjct: 693 GTEEHVRYPKLLEG--LKGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRI 748
Query: 447 NIPSQVTIEGCVPRNV---ACG 465
P + G +++ ACG
Sbjct: 749 TKPEPAALPGLDTKHIVGIACG 770
Score = 147 (56.8 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 41/149 (27%), Positives = 71/149 (47%)
Query: 300 NYVKGIA-CGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ----I 354
N VK A G H ++ G + ++G G G+ G G T P +S+L G Q +
Sbjct: 495 NIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHV 554
Query: 355 EGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCG 414
+A G ++ I+++G++Y + +T+P L+ L+ + VSCG
Sbjct: 555 VHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTG--LKGLKVIDVSCG 612
Query: 415 A--RHTAVIADDGKVFCWGWNKYGQLGLG 441
+ T + ++G+V+ WG YG+LG G
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG 641
Score = 135 (52.6 bits), Expect = 6.9e-10, Sum P(5) = 6.9e-10
Identities = 44/150 (29%), Positives = 61/150 (40%)
Query: 274 SYGKDRSAALSRGSVNSEGPGF-----RVPGNYVKGIACGGRHSAVITDAGALLTFGWGL 328
S+G L RG SEG R+ G V I CG + S +T +G + T+G G
Sbjct: 3180 SWGDGDFGKLGRGG--SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3237
Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXX 388
Y + G G+ P V L G +I VA G H + ++ G VYA
Sbjct: 3238 YFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGT 3297
Query: 389 DQAETLPRLLDAPSLENVHSKSVSCGARHT 418
P L+ LE V+CG+ H+
Sbjct: 3298 TTVNRKPTLVQG--LEGQKITRVACGSSHS 3325
Score = 119 (46.9 bits), Expect = 4.6e-08, Sum P(3) = 4.6e-08
Identities = 46/176 (26%), Positives = 73/176 (41%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYG--QCGQGSTDDELS-PNCVSSLLGIQIE 355
G+ V+ A G +A I F WGL Q G G ++ P+ +L + +
Sbjct: 2945 GSLVRKKAAGLESAATIRTK----VFVWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVV 2999
Query: 356 GVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAET-LPRLLDAPSLENVHSKSVSCG 414
VA G ++ +G VYA +PR + A S V +V G
Sbjct: 3000 QVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSG 3059
Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
RH + DGK+F WG G+LG ++ + P + ++ R++ACG H+
Sbjct: 3060 GRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHS 3115
Score = 116 (45.9 bits), Expect = 5.6e-08, Sum P(5) = 5.6e-08
Identities = 39/163 (23%), Positives = 81/163 (49%)
Query: 315 ITDAGALLTFGWGLY--GQCG--QGSTDDELSP-NCVSSLLGIQIEGVAAGLWHTICISS 369
++ G+ +GWG GQ G +G+ +P +++L +Q+ G L+ +++
Sbjct: 3951 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLF---AVTA 4007
Query: 370 DGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSK--SVSCGARHTAVIADDGKV 427
DG +YA ++ + P LL+ S+++V K +V+ G +H ++ +G+V
Sbjct: 4008 DGKLYATGYGAGGRLGIGGTESVSTPTLLE--SIQHVFIKKVAVNSGGKHCLALSSEGEV 4065
Query: 428 FCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
+ WG + G+LG G+ + P + ++ G ++A G H+
Sbjct: 4066 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHS 4108
Score = 110 (43.8 bits), Expect = 8.8e-19, Sum P(3) = 8.8e-19
Identities = 28/77 (36%), Positives = 38/77 (49%)
Query: 49 VCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAG 106
VC CG F++A++ S + TWG D + T H P+ IV A G
Sbjct: 3211 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTD-VHVRKPQVVEGLRGKKIVHVAVG 3269
Query: 107 WAHCVAVTEGGEVYTWG 123
HC+AVT+ G+VY WG
Sbjct: 3270 ALHCLAVTDTGQVYAWG 3286
Score = 109 (43.4 bits), Expect = 7.7e-19, Sum P(4) = 7.7e-19
Identities = 24/78 (30%), Positives = 41/78 (52%)
Query: 48 DVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAA 105
D+ CG F++A++ ++ TWG D+ + T +H P+ ++ AA
Sbjct: 659 DIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTE-EHVRYPKLLEGLKGKKVIDVAA 717
Query: 106 GWAHCVAVTEGGEVYTWG 123
G HC+A+TE EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735
Score = 101 (40.6 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 25/77 (32%), Positives = 37/77 (48%)
Query: 50 CGGGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHG-EIPEPFPLPTEASIVKAAAG 106
CG G + ++D + +WG D LG+ G G ++P T+ +VK G
Sbjct: 4155 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG----GSDGCKVPMKIDSLTDLGVVKVECG 4210
Query: 107 WAHCVAVTEGGEVYTWG 123
VA+T+ G VYTWG
Sbjct: 4211 SQFSVALTKSGAVYTWG 4227
Score = 99 (39.9 bits), Expect = 9.7e-14, Sum P(3) = 9.7e-14
Identities = 26/80 (32%), Positives = 42/80 (52%)
Query: 48 DV-CGGGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHG-EIPEPFPLPTEASIVKA 103
DV CG G +A++++ ++ +WG D LG+ G G + P+ + IVK
Sbjct: 608 DVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRG----GSDGCKTPKLIEKLQDLDIVKV 663
Query: 104 AAGWAHCVAVTEGGEVYTWG 123
G +A+T+ G+VYTWG
Sbjct: 664 RCGSQFSIALTKDGQVYTWG 683
Score = 98 (39.6 bits), Expect = 7.3e-09, Sum P(4) = 7.3e-09
Identities = 32/92 (34%), Positives = 44/92 (47%)
Query: 49 VCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWA 108
V GG AMA++ K+ +WG DD G+ S + + P I A G +
Sbjct: 3056 VHSGG-RHAMALTVDGKIFSWGEGDD-GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3113
Query: 109 HCVAVTEGGEVYTWGWKECVPSGRV-FGDLST 139
H A+T GE+YTWG E GR+ GD +T
Sbjct: 3114 HSAAITSSGELYTWGLGEY---GRLGHGDNTT 3142
Score = 97 (39.2 bits), Expect = 5.3e-06, Sum P(5) = 5.3e-06
Identities = 30/97 (30%), Positives = 44/97 (45%)
Query: 274 SYGKDRSAALSRGS-VNSEGP----GFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL 328
++GK L G+ V+ P G R G + +A G H +TD G + +G
Sbjct: 3232 TWGKGDYFRLGHGTDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDTGQVYAWGDND 3289
Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTI 365
+GQ G G+T P V L G +I VA G H++
Sbjct: 3290 HGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3326
Score = 92 (37.4 bits), Expect = 6.6e-06, Sum P(4) = 6.6e-06
Identities = 26/73 (35%), Positives = 35/73 (47%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLY--GQCGQGSTDDELSPNCVSSLLGIQIEG 356
G V IA G H T+ G + WG GQ G G+T+ P V++L G +I
Sbjct: 4253 GKKVIAIATGSLHCVCCTEDGLGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINR 4312
Query: 357 VAAGLWHTICISS 369
VA G HT+ S+
Sbjct: 4313 VACGSAHTLAWST 4325
Score = 86 (35.3 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 29/99 (29%), Positives = 45/99 (45%)
Query: 49 VCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASI--VKAAAG 106
V GG +A+S ++ +WG +D G+ + G P + + I V AAG
Sbjct: 4049 VNSGG-KHCLALSSEGEVYSWGEAED-GK--LGHGNRSPCDRPRVIESLRGIEVVDIAAG 4104
Query: 107 WAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDK 145
AH +T G+++TWG GR +G L G D+
Sbjct: 4105 GAHSACITAAGDLFTWG------KGR-YGRLGHGDSEDQ 4136
Score = 80 (33.2 bits), Expect = 3.8e-07, Sum P(5) = 3.8e-07
Identities = 33/117 (28%), Positives = 51/117 (43%)
Query: 14 VFMWGYLPGALPQRS---PILSPLVVRLPLTVGSAWRDVCGGGCG--FAMAISDSRKLIT 68
VF WG G P+ P ++ L+ A + V CG ++ AI+ +L T
Sbjct: 517 VFSWGCGDGGRLGHGDTVPLEEPKLISA-LSGKQAGKHVVHIACGSTYSAAITAEGELYT 575
Query: 69 WGSTDDLGQSYVTSGKHGEIPEPFPLPTEASI--VKAAAGWAHCVAVTEGGEVYTWG 123
WG + G+ S + IP + V +G A +AVTE G+V++WG
Sbjct: 576 WGR-GNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWG 631
Score = 76 (31.8 bits), Expect = 2.6e-15, Sum P(3) = 2.6e-15
Identities = 20/75 (26%), Positives = 33/75 (44%)
Query: 50 CGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHG-EIPEPFPLPTEASIVKAAAGWA 108
CG +A++D + +WG D G+ G G IP+ + + G
Sbjct: 3162 CGSRDAQTLALTDEGLVFSWGD-GDFGK-LGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 3219
Query: 109 HCVAVTEGGEVYTWG 123
+A+T+ G V+TWG
Sbjct: 3220 FSLALTKSGVVWTWG 3234
Score = 68 (29.0 bits), Expect = 8.2e-14, Sum P(4) = 8.2e-14
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 101 VKAAAGWAHCVAVTEGGEVYTWGWKE 126
V +G HC+A++ GEVY+WG E
Sbjct: 4047 VAVNSGGKHCLALSSEGEVYSWGEAE 4072
Score = 67 (28.6 bits), Expect = 7.5e-06, Sum P(4) = 7.5e-06
Identities = 25/87 (28%), Positives = 39/87 (44%)
Query: 55 GFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVT 114
G A + K+ WG +D Q G ++P + ++V+ A G AVT
Sbjct: 2954 GLESAATIRTKVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT 3012
Query: 115 EGGEVYTWGWKECVPSGRVFGDLSTGT 141
G+VY G E +GR+ +S+GT
Sbjct: 3013 VEGKVYACG--EAT-NGRLGLGISSGT 3036
Score = 66 (28.3 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 21/72 (29%), Positives = 36/72 (50%)
Query: 58 MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPT----EAS--IVKAAAGWAHCV 111
+A+S + ++ +WG D G+ + G + EP + +A +V A G +
Sbjct: 509 LALSANGEVFSWGCGDG-GR--LGHGDTVPLEEPKLISALSGKQAGKHVVHIACGSTYSA 565
Query: 112 AVTEGGEVYTWG 123
A+T GE+YTWG
Sbjct: 566 AITAEGELYTWG 577
Score = 59 (25.8 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 99 SIVKAAA--GWAHCVAVTEGGEVYTWGWKECVPSGRV-FGD 136
+IVK AA H +A++ GEV++WG C GR+ GD
Sbjct: 495 NIVKIAAHSDGHHYLALSANGEVFSWG---CGDGGRLGHGD 532
Score = 59 (25.8 bits), Expect = 4.4e-05, Sum P(4) = 4.4e-05
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 52 GGCGFAMAISDSRKLITWGSTDD--LGQSYVTSGKHGEIPEPFPLPTEAS-IVKAAA--- 105
GG A++ K+ G + LG ++SG +P P + ++ +VK A
Sbjct: 3003 GGSKSLFAVTVEGKVYACGEATNGRLGLG-ISSGT---VPIPRQITALSNYVVKKVAVHS 3058
Query: 106 GWAHCVAVTEGGEVYTWG 123
G H +A+T G++++WG
Sbjct: 3059 GGRHAMALTVDGKIFSWG 3076
Score = 53 (23.7 bits), Expect = 9.7e-14, Sum P(3) = 9.7e-14
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSD 238
G E +P L+ G ++ VAAG H LAL++
Sbjct: 693 GTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTE 727
Score = 52 (23.4 bits), Expect = 7.7e-19, Sum P(4) = 7.7e-19
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGR--HTLALSD 238
GD P +V + G R+ VA G R TLAL+D
Sbjct: 3138 GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3174
Score = 49 (22.3 bits), Expect = 0.00032, Sum P(5) = 0.00032
Identities = 21/67 (31%), Positives = 29/67 (43%)
Query: 48 DVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLP--TEASIVKAAA 105
DV G +A+++ ++ +WGS D Q + T PEP LP IV A
Sbjct: 714 DVAAGST-HCLALTEDSEVHSWGSNDQC-QHFDTL--RITKPEPAALPGLDTKHIVGIAC 769
Query: 106 GWAHCVA 112
G A A
Sbjct: 770 GPAQSFA 776
Score = 48 (22.0 bits), Expect = 8.8e-19, Sum P(3) = 8.8e-19
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 198 AESSSSGDENLSAF--PCLVTLNPGVRIATVAAGGRHTLALS 237
AE G N S P ++ G+ + +AAGG H+ ++
Sbjct: 4071 AEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACIT 4112
Score = 47 (21.6 bits), Expect = 2.5e-18, Sum P(4) = 2.5e-18
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALS 237
G E++S P L+ V I VA +GG+H LALS
Sbjct: 4026 GTESVST-PTLLESIQHVFIKKVAVNSGGKHCLALS 4060
Score = 47 (21.6 bits), Expect = 2.4e-12, Sum P(3) = 2.4e-12
Identities = 16/62 (25%), Positives = 27/62 (43%)
Query: 53 GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
G +A++D+ ++ WG D Q T+ + + P I + A G +H VA
Sbjct: 3269 GALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRK-PTLVQGLEGQKITRVACGSSHSVA 3327
Query: 113 VT 114
T
Sbjct: 3328 WT 3329
Score = 47 (21.6 bits), Expect = 2.4e-12, Sum P(3) = 2.4e-12
Identities = 16/69 (23%), Positives = 27/69 (39%)
Query: 56 FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTE 115
+ ++ S + WG + GQ G ++P P V+ G AVT
Sbjct: 3949 WTLSAGGSGTIYGWGH-NHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTA 4007
Query: 116 GGEVYTWGW 124
G++Y G+
Sbjct: 4008 DGKLYATGY 4016
Score = 43 (20.2 bits), Expect = 6.3e-18, Sum P(4) = 6.3e-18
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 220 GVRIATVAAGGRHTLALSD 238
G +I VA G H LA++D
Sbjct: 3260 GKKIVHVAVGALHCLAVTD 3278
Score = 42 (19.8 bits), Expect = 7.7e-19, Sum P(4) = 7.7e-19
Identities = 10/35 (28%), Positives = 15/35 (42%)
Query: 123 GWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTE 157
GW+ +P G G+ T D D+ + L E
Sbjct: 1697 GWQRLIPEGANIGEPLTDCLKDVDLIPPFNRMLLE 1731
Score = 42 (19.8 bits), Expect = 1.2e-12, Sum P(4) = 1.2e-12
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 221 VRIATVAAGGRHTLALS 237
V+ V +GGRH +AL+
Sbjct: 3051 VKKVAVHSGGRHAMALT 3067
Score = 42 (19.8 bits), Expect = 6.1e-05, Sum P(4) = 6.1e-05
Identities = 13/37 (35%), Positives = 16/37 (43%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGG--RHTLALSD 238
GD P LV G R+ +A G TL L+D
Sbjct: 4131 GDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTD 4167
Score = 40 (19.1 bits), Expect = 0.00013, Sum P(4) = 0.00013
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 202 SSGDENLSAFPCLVTLNPGVRIATVAAGG--RHTLALSD 238
SS D+ + P LVT G+++ V+ G TLA+++
Sbjct: 588 SSEDQTI---PMLVTGLKGLKVIDVSCGSGDAQTLAVTE 623
Score = 39 (18.8 bits), Expect = 7.9e-15, Sum P(5) = 7.9e-15
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 299 GNYVKGIACGGRHSAVIT 316
G + +ACG HS T
Sbjct: 3312 GQKITRVACGSSHSVAWT 3329
Score = 38 (18.4 bits), Expect = 6.9e-10, Sum P(5) = 6.9e-10
Identities = 6/9 (66%), Positives = 6/9 (66%)
Query: 424 DGKVFCWGW 432
DG V WGW
Sbjct: 3699 DGSVNGWGW 3707
Score = 37 (18.1 bits), Expect = 8.2e-14, Sum P(4) = 8.2e-14
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 68 TWGSTDDLGQSYVTSGKHGE 87
T+G ++ GQS V G+ G+
Sbjct: 2750 TFGRINEPGQSPVFCGRSGK 2769
>UNIPROTKB|E1C8K2 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF00569 Pfam:PF06701 PROSITE:PS01357
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS51416
SMART:SM00119 SMART:SM00291 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0046872 GO:GO:0008270 GO:GO:0020037 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 EMBL:AADN02017653 IPI:IPI00818548
Ensembl:ENSGALT00000036596 ArrayExpress:E1C8K2 Uniprot:E1C8K2
Length = 4841
Score = 210 (79.0 bits), Expect = 7.7e-19, Sum P(4) = 7.7e-19
Identities = 55/173 (31%), Positives = 82/173 (47%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
G V IA GG HSA IT AG L T+G G YG+ G G ++D+L P V +L G ++ +A
Sbjct: 4095 GIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIA 4154
Query: 359 AGLW--HTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGAR 416
G T+C++ D V++ +P +D SL ++ V CG++
Sbjct: 4155 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTDLGVVKVECGSQ 4212
Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWH 468
+ + G V+ WG Y +LG G P QV ++G +A G H
Sbjct: 4213 FSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4265
Score = 202 (76.2 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 52/177 (29%), Positives = 87/177 (49%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
G +V IACG +SA IT G L T+G G YG+ G GS++D+ P V+ L G+++ V+
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVS 610
Query: 359 AGLW--HTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGAR 416
G T+ ++ +G V++ P+L++ L+++ V CG++
Sbjct: 611 CGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE--KLQDLDIVKVRCGSQ 668
Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
+ + DG+V+ WG +LG G P + ++G +VA G H L L
Sbjct: 669 FSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLAL 725
Score = 178 (67.7 bits), Expect = 7.9e-15, Sum P(5) = 7.9e-15
Identities = 47/172 (27%), Positives = 82/172 (47%)
Query: 301 YVKGIAC--GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
++K +A GG+H ++ G + ++G G+ G G+ P + SL GI++ +A
Sbjct: 4043 FIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIA 4102
Query: 359 AGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGA--R 416
AG H+ CI++ GD++ + + P+L++A L+ ++CG+
Sbjct: 4103 AGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEA--LQGYRVIDIACGSGDA 4160
Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV---TIEGCVPRNVACG 465
T + DD V+ WG YG+LG G +P ++ T G V V CG
Sbjct: 4161 QTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTDLGVV--KVECG 4210
Score = 171 (65.3 bits), Expect = 9.7e-14, Sum P(3) = 9.7e-14
Identities = 57/209 (27%), Positives = 93/209 (44%)
Query: 270 CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYV-KGIAC--GGRHSAVITDAGALLTFGW 326
C E++ G+ +S G+V NYV K +A GGRH+ +T G + ++G
Sbjct: 3020 CGEATNGR-LGLGISSGTVPIPRQ-ITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGE 3077
Query: 327 GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXX 386
G G+ G S + P + +L +I +A G H+ I+S G++Y
Sbjct: 3078 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGH 3137
Query: 387 XXDQAETLPRLLDAPSLENVHSKSVSCGAR--HTAVIADDGKVFCWGWNKYGQLGLGDVI 444
+ + P+++ L V+CG+R T + D+G VF WG +G+LG G
Sbjct: 3138 GDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSE 3195
Query: 445 DRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
NIP + + G + CG +L L
Sbjct: 3196 GCNIPQNIERLNGQGVCQIECGAQFSLAL 3224
Score = 165 (63.1 bits), Expect = 1.2e-12, Sum P(4) = 1.2e-12
Identities = 46/175 (26%), Positives = 79/175 (45%)
Query: 299 GNYVKGIACGGR--HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG 356
G+ V +ACG R + +TD G + ++G G +G+ G+G ++ P + L G +
Sbjct: 3154 GHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQ 3213
Query: 357 VAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGAR 416
+ G ++ ++ G V+ D P++++ L V+ GA
Sbjct: 3214 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEG--LRGKKIVHVAVGAL 3271
Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
H + D G+V+ WG N +GQ G G P+ V +EG VACG H++
Sbjct: 3272 HCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3326
Score = 164 (62.8 bits), Expect = 1.5e-13, Sum P(4) = 1.5e-13
Identities = 56/205 (27%), Positives = 86/205 (41%)
Query: 274 SYGKDRSAALSRGSVNSE-GPGF--RVPGNYVKGIACGG--RHSAVITDAGALLTFGWGL 328
++GK R L G + P + G V IACG + +TD + ++G G
Sbjct: 4119 TWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 4178
Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXX 388
YG+ G+G +D P + SL + + V G ++ ++ G VY
Sbjct: 4179 YGKLGRGGSDGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS 4238
Query: 389 DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDG--KVFCWGWNKYGQLGLGDVIDR 446
D PR + L+ +++ G+ H +DG +V+ WG N GQLG G
Sbjct: 4239 DDHVRRPRQVQG--LQGKKVIAIATGSLHCVCCTEDGLGEVYTWGDNDEGQLGDGTTNAI 4296
Query: 447 NIPSQVT-IEGCVPRNVACGWWHTL 470
P V ++G VACG HTL
Sbjct: 4297 QRPRLVAALQGKKINRVACGSAHTL 4321
Score = 151 (58.2 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 43/146 (29%), Positives = 69/146 (47%)
Query: 334 QGSTDDELSPNCVSSLLGIQIEGVAAGL--WHTICISSDGDVYAXXXXXXXXXXXXXDQA 391
Q D L P V SL I +AA H + +S++G+V++
Sbjct: 476 QAYNSDTLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVP 535
Query: 392 ETLPRLLDAPSLENV--HSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIP 449
P+L+ A S + H ++CG+ ++A I +G+++ WG YG+LG G D+ IP
Sbjct: 536 LEEPKLISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIP 595
Query: 450 SQVT-IEGCVPRNVACGWWHTLLLAV 474
VT ++G +V+CG LAV
Sbjct: 596 MLVTGLKGLKVIDVSCGSGDAQTLAV 621
Score = 148 (57.2 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 48/202 (23%), Positives = 85/202 (42%)
Query: 274 SYGKDRSAALSRGSVNSEGPGFRVPGNYVKG-----IACGG--RHSAVITDAGALLTFGW 326
++G+ L GS + V G +KG ++CG + +T+ G + ++G
Sbjct: 575 TWGRGNYGRLGHGSSEDQTIPMLVTG--LKGLKVIDVSCGSGDAQTLAVTENGQVWSWGD 632
Query: 327 GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXX 386
G YG+ G+G +D +P + L + I V G +I ++ DG VY
Sbjct: 633 GDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGH 692
Query: 387 XXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR 446
++ P+LL+ L+ V+ G+ H + +D +V WG N Q D +
Sbjct: 693 GTEEHVRYPKLLEG--LKGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRI 748
Query: 447 NIPSQVTIEGCVPRNV---ACG 465
P + G +++ ACG
Sbjct: 749 TKPEPAALPGLDTKHIVGIACG 770
Score = 147 (56.8 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 41/149 (27%), Positives = 71/149 (47%)
Query: 300 NYVKGIA-CGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ----I 354
N VK A G H ++ G + ++G G G+ G G T P +S+L G Q +
Sbjct: 495 NIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHV 554
Query: 355 EGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCG 414
+A G ++ I+++G++Y + +T+P L+ L+ + VSCG
Sbjct: 555 VHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTG--LKGLKVIDVSCG 612
Query: 415 A--RHTAVIADDGKVFCWGWNKYGQLGLG 441
+ T + ++G+V+ WG YG+LG G
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG 641
Score = 135 (52.6 bits), Expect = 6.9e-10, Sum P(5) = 6.9e-10
Identities = 44/150 (29%), Positives = 61/150 (40%)
Query: 274 SYGKDRSAALSRGSVNSEGPGF-----RVPGNYVKGIACGGRHSAVITDAGALLTFGWGL 328
S+G L RG SEG R+ G V I CG + S +T +G + T+G G
Sbjct: 3180 SWGDGDFGKLGRGG--SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3237
Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXX 388
Y + G G+ P V L G +I VA G H + ++ G VYA
Sbjct: 3238 YFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGT 3297
Query: 389 DQAETLPRLLDAPSLENVHSKSVSCGARHT 418
P L+ LE V+CG+ H+
Sbjct: 3298 TTVNRKPTLVQG--LEGQKITRVACGSSHS 3325
Score = 119 (46.9 bits), Expect = 4.6e-08, Sum P(3) = 4.6e-08
Identities = 46/176 (26%), Positives = 73/176 (41%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYG--QCGQGSTDDELS-PNCVSSLLGIQIE 355
G+ V+ A G +A I F WGL Q G G ++ P+ +L + +
Sbjct: 2945 GSLVRKKAAGLESAATIRTK----VFVWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVV 2999
Query: 356 GVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAET-LPRLLDAPSLENVHSKSVSCG 414
VA G ++ +G VYA +PR + A S V +V G
Sbjct: 3000 QVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSG 3059
Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
RH + DGK+F WG G+LG ++ + P + ++ R++ACG H+
Sbjct: 3060 GRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHS 3115
Score = 116 (45.9 bits), Expect = 5.6e-08, Sum P(5) = 5.6e-08
Identities = 39/163 (23%), Positives = 81/163 (49%)
Query: 315 ITDAGALLTFGWGLY--GQCG--QGSTDDELSP-NCVSSLLGIQIEGVAAGLWHTICISS 369
++ G+ +GWG GQ G +G+ +P +++L +Q+ G L+ +++
Sbjct: 3951 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLF---AVTA 4007
Query: 370 DGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSK--SVSCGARHTAVIADDGKV 427
DG +YA ++ + P LL+ S+++V K +V+ G +H ++ +G+V
Sbjct: 4008 DGKLYATGYGAGGRLGIGGTESVSTPTLLE--SIQHVFIKKVAVNSGGKHCLALSSEGEV 4065
Query: 428 FCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
+ WG + G+LG G+ + P + ++ G ++A G H+
Sbjct: 4066 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHS 4108
Score = 110 (43.8 bits), Expect = 8.8e-19, Sum P(3) = 8.8e-19
Identities = 28/77 (36%), Positives = 38/77 (49%)
Query: 49 VCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAG 106
VC CG F++A++ S + TWG D + T H P+ IV A G
Sbjct: 3211 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTD-VHVRKPQVVEGLRGKKIVHVAVG 3269
Query: 107 WAHCVAVTEGGEVYTWG 123
HC+AVT+ G+VY WG
Sbjct: 3270 ALHCLAVTDTGQVYAWG 3286
Score = 109 (43.4 bits), Expect = 7.7e-19, Sum P(4) = 7.7e-19
Identities = 24/78 (30%), Positives = 41/78 (52%)
Query: 48 DVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAA 105
D+ CG F++A++ ++ TWG D+ + T +H P+ ++ AA
Sbjct: 659 DIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTE-EHVRYPKLLEGLKGKKVIDVAA 717
Query: 106 GWAHCVAVTEGGEVYTWG 123
G HC+A+TE EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735
Score = 101 (40.6 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 25/77 (32%), Positives = 37/77 (48%)
Query: 50 CGGGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHG-EIPEPFPLPTEASIVKAAAG 106
CG G + ++D + +WG D LG+ G G ++P T+ +VK G
Sbjct: 4155 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG----GSDGCKVPMKIDSLTDLGVVKVECG 4210
Query: 107 WAHCVAVTEGGEVYTWG 123
VA+T+ G VYTWG
Sbjct: 4211 SQFSVALTKSGAVYTWG 4227
Score = 99 (39.9 bits), Expect = 9.7e-14, Sum P(3) = 9.7e-14
Identities = 26/80 (32%), Positives = 42/80 (52%)
Query: 48 DV-CGGGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHG-EIPEPFPLPTEASIVKA 103
DV CG G +A++++ ++ +WG D LG+ G G + P+ + IVK
Sbjct: 608 DVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRG----GSDGCKTPKLIEKLQDLDIVKV 663
Query: 104 AAGWAHCVAVTEGGEVYTWG 123
G +A+T+ G+VYTWG
Sbjct: 664 RCGSQFSIALTKDGQVYTWG 683
Score = 98 (39.6 bits), Expect = 7.3e-09, Sum P(4) = 7.3e-09
Identities = 32/92 (34%), Positives = 44/92 (47%)
Query: 49 VCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWA 108
V GG AMA++ K+ +WG DD G+ S + + P I A G +
Sbjct: 3056 VHSGG-RHAMALTVDGKIFSWGEGDD-GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3113
Query: 109 HCVAVTEGGEVYTWGWKECVPSGRV-FGDLST 139
H A+T GE+YTWG E GR+ GD +T
Sbjct: 3114 HSAAITSSGELYTWGLGEY---GRLGHGDNTT 3142
Score = 97 (39.2 bits), Expect = 5.3e-06, Sum P(5) = 5.3e-06
Identities = 30/97 (30%), Positives = 44/97 (45%)
Query: 274 SYGKDRSAALSRGS-VNSEGP----GFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL 328
++GK L G+ V+ P G R G + +A G H +TD G + +G
Sbjct: 3232 TWGKGDYFRLGHGTDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDTGQVYAWGDND 3289
Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTI 365
+GQ G G+T P V L G +I VA G H++
Sbjct: 3290 HGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3326
Score = 92 (37.4 bits), Expect = 6.6e-06, Sum P(4) = 6.6e-06
Identities = 26/73 (35%), Positives = 35/73 (47%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLY--GQCGQGSTDDELSPNCVSSLLGIQIEG 356
G V IA G H T+ G + WG GQ G G+T+ P V++L G +I
Sbjct: 4253 GKKVIAIATGSLHCVCCTEDGLGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINR 4312
Query: 357 VAAGLWHTICISS 369
VA G HT+ S+
Sbjct: 4313 VACGSAHTLAWST 4325
Score = 86 (35.3 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 29/99 (29%), Positives = 45/99 (45%)
Query: 49 VCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASI--VKAAAG 106
V GG +A+S ++ +WG +D G+ + G P + + I V AAG
Sbjct: 4049 VNSGG-KHCLALSSEGEVYSWGEAED-GK--LGHGNRSPCDRPRVIESLRGIEVVDIAAG 4104
Query: 107 WAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDK 145
AH +T G+++TWG GR +G L G D+
Sbjct: 4105 GAHSACITAAGDLFTWG------KGR-YGRLGHGDSEDQ 4136
Score = 80 (33.2 bits), Expect = 3.8e-07, Sum P(5) = 3.8e-07
Identities = 33/117 (28%), Positives = 51/117 (43%)
Query: 14 VFMWGYLPGALPQRS---PILSPLVVRLPLTVGSAWRDVCGGGCG--FAMAISDSRKLIT 68
VF WG G P+ P ++ L+ A + V CG ++ AI+ +L T
Sbjct: 517 VFSWGCGDGGRLGHGDTVPLEEPKLISA-LSGKQAGKHVVHIACGSTYSAAITAEGELYT 575
Query: 69 WGSTDDLGQSYVTSGKHGEIPEPFPLPTEASI--VKAAAGWAHCVAVTEGGEVYTWG 123
WG + G+ S + IP + V +G A +AVTE G+V++WG
Sbjct: 576 WGR-GNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWG 631
Score = 76 (31.8 bits), Expect = 2.6e-15, Sum P(3) = 2.6e-15
Identities = 20/75 (26%), Positives = 33/75 (44%)
Query: 50 CGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHG-EIPEPFPLPTEASIVKAAAGWA 108
CG +A++D + +WG D G+ G G IP+ + + G
Sbjct: 3162 CGSRDAQTLALTDEGLVFSWGD-GDFGK-LGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 3219
Query: 109 HCVAVTEGGEVYTWG 123
+A+T+ G V+TWG
Sbjct: 3220 FSLALTKSGVVWTWG 3234
Score = 68 (29.0 bits), Expect = 8.2e-14, Sum P(4) = 8.2e-14
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 101 VKAAAGWAHCVAVTEGGEVYTWGWKE 126
V +G HC+A++ GEVY+WG E
Sbjct: 4047 VAVNSGGKHCLALSSEGEVYSWGEAE 4072
Score = 67 (28.6 bits), Expect = 7.5e-06, Sum P(4) = 7.5e-06
Identities = 25/87 (28%), Positives = 39/87 (44%)
Query: 55 GFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVT 114
G A + K+ WG +D Q G ++P + ++V+ A G AVT
Sbjct: 2954 GLESAATIRTKVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT 3012
Query: 115 EGGEVYTWGWKECVPSGRVFGDLSTGT 141
G+VY G E +GR+ +S+GT
Sbjct: 3013 VEGKVYACG--EAT-NGRLGLGISSGT 3036
Score = 66 (28.3 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 21/72 (29%), Positives = 36/72 (50%)
Query: 58 MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPT----EAS--IVKAAAGWAHCV 111
+A+S + ++ +WG D G+ + G + EP + +A +V A G +
Sbjct: 509 LALSANGEVFSWGCGDG-GR--LGHGDTVPLEEPKLISALSGKQAGKHVVHIACGSTYSA 565
Query: 112 AVTEGGEVYTWG 123
A+T GE+YTWG
Sbjct: 566 AITAEGELYTWG 577
Score = 59 (25.8 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 99 SIVKAAA--GWAHCVAVTEGGEVYTWGWKECVPSGRV-FGD 136
+IVK AA H +A++ GEV++WG C GR+ GD
Sbjct: 495 NIVKIAAHSDGHHYLALSANGEVFSWG---CGDGGRLGHGD 532
Score = 59 (25.8 bits), Expect = 4.4e-05, Sum P(4) = 4.4e-05
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 52 GGCGFAMAISDSRKLITWGSTDD--LGQSYVTSGKHGEIPEPFPLPTEAS-IVKAAA--- 105
GG A++ K+ G + LG ++SG +P P + ++ +VK A
Sbjct: 3003 GGSKSLFAVTVEGKVYACGEATNGRLGLG-ISSGT---VPIPRQITALSNYVVKKVAVHS 3058
Query: 106 GWAHCVAVTEGGEVYTWG 123
G H +A+T G++++WG
Sbjct: 3059 GGRHAMALTVDGKIFSWG 3076
Score = 53 (23.7 bits), Expect = 9.7e-14, Sum P(3) = 9.7e-14
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSD 238
G E +P L+ G ++ VAAG H LAL++
Sbjct: 693 GTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTE 727
Score = 52 (23.4 bits), Expect = 7.7e-19, Sum P(4) = 7.7e-19
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGR--HTLALSD 238
GD P +V + G R+ VA G R TLAL+D
Sbjct: 3138 GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3174
Score = 49 (22.3 bits), Expect = 0.00032, Sum P(5) = 0.00032
Identities = 21/67 (31%), Positives = 29/67 (43%)
Query: 48 DVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLP--TEASIVKAAA 105
DV G +A+++ ++ +WGS D Q + T PEP LP IV A
Sbjct: 714 DVAAGST-HCLALTEDSEVHSWGSNDQC-QHFDTL--RITKPEPAALPGLDTKHIVGIAC 769
Query: 106 GWAHCVA 112
G A A
Sbjct: 770 GPAQSFA 776
Score = 48 (22.0 bits), Expect = 8.8e-19, Sum P(3) = 8.8e-19
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 198 AESSSSGDENLSAF--PCLVTLNPGVRIATVAAGGRHTLALS 237
AE G N S P ++ G+ + +AAGG H+ ++
Sbjct: 4071 AEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACIT 4112
Score = 47 (21.6 bits), Expect = 2.5e-18, Sum P(4) = 2.5e-18
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALS 237
G E++S P L+ V I VA +GG+H LALS
Sbjct: 4026 GTESVST-PTLLESIQHVFIKKVAVNSGGKHCLALS 4060
Score = 47 (21.6 bits), Expect = 2.4e-12, Sum P(3) = 2.4e-12
Identities = 16/62 (25%), Positives = 27/62 (43%)
Query: 53 GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
G +A++D+ ++ WG D Q T+ + + P I + A G +H VA
Sbjct: 3269 GALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRK-PTLVQGLEGQKITRVACGSSHSVA 3327
Query: 113 VT 114
T
Sbjct: 3328 WT 3329
Score = 47 (21.6 bits), Expect = 2.4e-12, Sum P(3) = 2.4e-12
Identities = 16/69 (23%), Positives = 27/69 (39%)
Query: 56 FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTE 115
+ ++ S + WG + GQ G ++P P V+ G AVT
Sbjct: 3949 WTLSAGGSGTIYGWGH-NHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTA 4007
Query: 116 GGEVYTWGW 124
G++Y G+
Sbjct: 4008 DGKLYATGY 4016
Score = 43 (20.2 bits), Expect = 6.3e-18, Sum P(4) = 6.3e-18
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 220 GVRIATVAAGGRHTLALSD 238
G +I VA G H LA++D
Sbjct: 3260 GKKIVHVAVGALHCLAVTD 3278
Score = 42 (19.8 bits), Expect = 7.7e-19, Sum P(4) = 7.7e-19
Identities = 10/35 (28%), Positives = 15/35 (42%)
Query: 123 GWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTE 157
GW+ +P G G+ T D D+ + L E
Sbjct: 1697 GWQRLIPEGANIGEPLTDCLKDVDLIPPFNRMLLE 1731
Score = 42 (19.8 bits), Expect = 1.2e-12, Sum P(4) = 1.2e-12
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 221 VRIATVAAGGRHTLALS 237
V+ V +GGRH +AL+
Sbjct: 3051 VKKVAVHSGGRHAMALT 3067
Score = 42 (19.8 bits), Expect = 6.1e-05, Sum P(4) = 6.1e-05
Identities = 13/37 (35%), Positives = 16/37 (43%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGG--RHTLALSD 238
GD P LV G R+ +A G TL L+D
Sbjct: 4131 GDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTD 4167
Score = 40 (19.1 bits), Expect = 0.00013, Sum P(4) = 0.00013
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 202 SSGDENLSAFPCLVTLNPGVRIATVAAGG--RHTLALSD 238
SS D+ + P LVT G+++ V+ G TLA+++
Sbjct: 588 SSEDQTI---PMLVTGLKGLKVIDVSCGSGDAQTLAVTE 623
Score = 39 (18.8 bits), Expect = 7.9e-15, Sum P(5) = 7.9e-15
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 299 GNYVKGIACGGRHSAVIT 316
G + +ACG HS T
Sbjct: 3312 GQKITRVACGSSHSVAWT 3329
Score = 38 (18.4 bits), Expect = 6.9e-10, Sum P(5) = 6.9e-10
Identities = 6/9 (66%), Positives = 6/9 (66%)
Query: 424 DGKVFCWGW 432
DG V WGW
Sbjct: 3699 DGSVNGWGW 3707
Score = 37 (18.1 bits), Expect = 8.2e-14, Sum P(4) = 8.2e-14
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 68 TWGSTDDLGQSYVTSGKHGE 87
T+G ++ GQS V G+ G+
Sbjct: 2750 TFGRINEPGQSPVFCGRSGK 2769
>TAIR|locus:2205794 [details] [associations]
symbol:AT1G27060 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 EMBL:BT030023 IPI:IPI00535833 RefSeq:NP_174026.1
UniGene:At.41142 UniGene:At.50938 ProteinModelPortal:A2RVN2
SMR:A2RVN2 DNASU:839595 EnsemblPlants:AT1G27060.1 GeneID:839595
KEGG:ath:AT1G27060 TAIR:At1g27060 HOGENOM:HOG000236375
InParanoid:A2RVN2 OMA:GYIYAWG PhylomeDB:A2RVN2
ProtClustDB:CLSN2682864 Genevestigator:A2RVN2 Uniprot:A2RVN2
Length = 386
Score = 184 (69.8 bits), Expect = 3.7e-18, Sum P(2) = 3.7e-18
Identities = 47/151 (31%), Positives = 74/151 (49%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
I+ G HSA I+ G F WG G CG G D +P + S L + VA G H
Sbjct: 211 ISANGDHSAAISADGQF--FSWGR-GFCG-GP--DVHAPQSLPSPLSFR--EVAVGWNHA 262
Query: 365 ICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLD-APSLENVHSKSVSCGARHTAVIAD 423
+ ++ DG+V+ Q ++ L + P + V ++ GA H+A + +
Sbjct: 263 LLLTVDGEVFKLGSTLNKQPEKQQLQIDSSEALFEKVPDFDGVKVMQIAAGAEHSAAVTE 322
Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI 454
+G+V WGW ++GQLGLG+ D+ P V++
Sbjct: 323 NGEVKTWGWGEHGQLGLGNTNDQTSPELVSL 353
Score = 180 (68.4 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 56/205 (27%), Positives = 90/205 (43%)
Query: 274 SYGKDRSAALSRGSV-NSEGPGFR--VPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
++G+ S L G + N P + + A G HS ++D+G + T G G +G
Sbjct: 71 TWGRGSSGQLGHGDILNITLPKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTCGNGSFG 130
Query: 331 QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQ 390
Q G G T +P VS ++ VA G+ H++ + + V D+
Sbjct: 131 QLGHGDTLSLSTPAKVSHFNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQLGFSSDR 190
Query: 391 AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDV-IDRNIP 449
+++ L++V +S H+A I+ DG+ F WG G G DV +++P
Sbjct: 191 IKSVNLPCVVSGLKDVEVVRISANGDHSAAISADGQFFSWG---RGFCGGPDVHAPQSLP 247
Query: 450 SQVTIEGCVPRNVACGWWHTLLLAV 474
S ++ R VA GW H LLL V
Sbjct: 248 SPLSF-----REVAVGWNHALLLTV 267
Score = 143 (55.4 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 30/81 (37%), Positives = 43/81 (53%)
Query: 390 QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIP 449
Q E LP+LL SL ++ ++CG H + GKVF WG GQLG GD+++ +P
Sbjct: 34 QDELLPQLLSLTSLPSI--SMLACGGAHVIALTSGGKVFTWGRGSSGQLGHGDILNITLP 91
Query: 450 SQVTI-EGCVPRNVACGWWHT 469
V+ + V A GW H+
Sbjct: 92 KLVSFFDDSVITQAAAGWSHS 112
Score = 143 (55.4 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 45/151 (29%), Positives = 67/151 (44%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
+ACGG H +T G + T+G G GQ G G + P VS I AAG H+
Sbjct: 53 LACGGAHVIALTSGGKVFTWGRGSSGQLGHGDILNITLPKLVSFFDDSVITQAAAGWSHS 112
Query: 365 ICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
+S G ++ + + P + + ++V K V+CG RH+ V+
Sbjct: 113 GFVSDSGCIFTCGNGSFGQLGHGDTLSLSTPAKVSHFNNDSV--KMVACGMRHSLVLFAG 170
Query: 425 GKVFCWGWNKYGQLGLG-DVIDR-NIPSQVT 453
+V +G K GQLG D I N+P V+
Sbjct: 171 NQVCGFGSGKRGQLGFSSDRIKSVNLPCVVS 201
Score = 128 (50.1 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 80/378 (21%), Positives = 138/378 (36%)
Query: 62 DSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYT 121
+ ++ +WG+ D GQ T + +P+ L + SI A G AH +A+T GG+V+T
Sbjct: 13 EEEQVWSWGAGTD-GQLGTTKLQDELLPQLLSLTSLPSISMLACGGAHVIALTSGGKVFT 71
Query: 122 WGWKECVPSGRV-FGDLSTGTGLDKDVFERQSSFLTEXXXXXXXXXXXXXXXXXXXXXXX 180
WG SG++ GD+ T L K V S +T+
Sbjct: 72 WGRGS---SGQLGHGDILNIT-LPKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTCGNG 127
Query: 181 XXXXXXXXXXISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIX 240
+SL+ A+ S ++++ C G+R + V G
Sbjct: 128 SFGQLGHGDTLSLSTP-AKVSHFNNDSVKMVAC------GMRHSLVLFAGNQVCGFGSGK 180
Query: 241 XXXXXXXXXXXXXXXXSRIRMVSSPHPIPCIESSYGKDRSAALSR-GSVNSEGPGF---- 295
+ VS + + S D SAA+S G S G GF
Sbjct: 181 RGQLGFSSDRIKSVNLPCV--VSGLKDVEVVRISANGDHSAAISADGQFFSWGRGFCGGP 238
Query: 296 --RVPGNY-----VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNC--- 345
P + + +A G H+ ++T G + G L Q + + S
Sbjct: 239 DVHAPQSLPSPLSFREVAVGWNHALLLTVDGEVFKLGSTLNKQPEKQQLQIDSSEALFEK 298
Query: 346 VSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLEN 405
V G+++ +AAG H+ ++ +G+V +T P L+ S++
Sbjct: 299 VPDFDGVKVMQIAAGAEHSAAVTENGEVKTWGWGEHGQLGLGNTNDQTSPELVSLGSID- 357
Query: 406 VHSKSVS--CGARHTAVI 421
+ +K + CG+ T +
Sbjct: 358 LRTKEIKVYCGSGFTYAV 375
Score = 103 (41.3 bits), Expect = 3.7e-18, Sum P(2) = 3.7e-18
Identities = 45/159 (28%), Positives = 73/159 (45%)
Query: 2 NGEGQ-EEKMERVVFMWGY-LPGAL--PQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFA 57
+GE Q +E+ E V+ WG G L + L P ++ L ++ S CGG
Sbjct: 4 HGETQADEEEEEQVWSWGAGTDGQLGTTKLQDELLPQLLSLT-SLPSISMLACGGA--HV 60
Query: 58 MAISDSRKLITWG--STDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTE 115
+A++ K+ TWG S+ LG + + +P+ ++ I +AAAGW+H V++
Sbjct: 61 IALTSGGKVFTWGRGSSGQLGHGDILNIT---LPKLVSFFDDSVITQAAAGWSHSGFVSD 117
Query: 116 GGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSF 154
G ++T G +G FG L G L + S F
Sbjct: 118 SGCIFTCG------NGS-FGQLGHGDTLSLSTPAKVSHF 149
>UNIPROTKB|O95199 [details] [associations]
symbol:RCBTB2 "RCC1 and BTB domain-containing protein 2"
species:9606 "Homo sapiens" [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=TAS] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CH471075 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
HOVERGEN:HBG053261 KO:K11494 EMBL:AF060219 EMBL:AY341245
EMBL:AK315703 EMBL:AL157813 EMBL:BC029052 IPI:IPI00658195
IPI:IPI00941277 PIR:T50663 RefSeq:NP_001259.1 UniGene:Hs.652712
ProteinModelPortal:O95199 SMR:O95199 IntAct:O95199
MINT:MINT-1481780 STRING:O95199 PhosphoSite:O95199 PRIDE:O95199
DNASU:1102 Ensembl:ENST00000344532 GeneID:1102 KEGG:hsa:1102
UCSC:uc001vch.3 CTD:1102 GeneCards:GC13M049063 HGNC:HGNC:1914
HPA:HPA040242 MIM:603524 neXtProt:NX_O95199 PharmGKB:PA26450
InParanoid:O95199 OrthoDB:EOG4M91R6 PhylomeDB:O95199 ChiTaRS:RCBTB2
GenomeRNAi:1102 NextBio:4558 ArrayExpress:O95199 Bgee:O95199
CleanEx:HS_RCBTB2 Genevestigator:O95199 GermOnline:ENSG00000136161
Uniprot:O95199
Length = 551
Score = 245 (91.3 bits), Expect = 4.3e-18, P = 4.3e-18
Identities = 64/203 (31%), Positives = 101/203 (49%)
Query: 276 GKDRSAALSRGSVNSEGPGFRVPGNYVKGIAC----GGRHSAVITDAGALLTFGWGLYGQ 331
G + L G V S R+ K IAC G H + T G + T+G Y Q
Sbjct: 71 GTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQ 130
Query: 332 CGQGSTDDELSPNCVSS-LLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQ 390
G G+T+ L P +S+ L Q+ VA G +H++ ++SDG+V+A
Sbjct: 131 LGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTV 190
Query: 391 AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
+ +PR + L+N +++CG + D G+V+ WG+N GQLGLG+ ++ P
Sbjct: 191 NQPIPRRVTG-CLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPC 249
Query: 451 QVT-IEGCVPRNVACGWWHTLLL 472
+V ++G + VACG+ HTL+L
Sbjct: 250 RVAALQGIRVQRVACGYAHTLVL 272
Score = 220 (82.5 bits), Expect = 3.1e-15, P = 3.1e-15
Identities = 73/289 (25%), Positives = 121/289 (41%)
Query: 191 ISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIXXXXXXXXXXX 250
+ L +Q S+G+E L T+N + + G L L D+
Sbjct: 42 LQLIRQACVFGSAGNEVL-----YTTVNDEIFVLGTNCCG--CLGLGDVQSTIEPRRLDS 94
Query: 251 XXXXXXSRIRMVSSPHPIPCIES----SYGKDRSAALSRGSVNSEGPGFRVPGNY----V 302
+ + S PH + ++G + + L G+ N + N V
Sbjct: 95 LNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQV 154
Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE-GVAAGL 361
+ACG HS V+T G + +G+ GQ G GST ++ P V+ L ++ +A G
Sbjct: 155 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ 214
Query: 362 WHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
+ + G+VY + P + A L+ + + V+CG HT V+
Sbjct: 215 MCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAA--LQGIRVQRVACGYAHTLVL 272
Query: 422 ADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE-GCVPRNVACGWWHT 469
D+G+V+ WG N YGQLG G+ +++ P+ VT+E + AC HT
Sbjct: 273 TDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHT 321
Score = 99 (39.9 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 31/104 (29%), Positives = 48/104 (46%)
Query: 275 YGKDRSAALSRGSVNSEGPGFRVP---GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
+G + + L G+ ++ RV G V+ +ACG H+ V+TD G + +G YGQ
Sbjct: 229 WGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQ 288
Query: 332 CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGD-VY 374
G G+ ++ P V+ IE A HT + G VY
Sbjct: 289 LGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVY 332
Score = 82 (33.9 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 26/92 (28%), Positives = 42/92 (45%)
Query: 51 GGGCGFAMAISDSRKLITWGST--DDLGQSYVTSGKHGEIPEPFPLP-TEASIVKAAAGW 107
G G +A ++ ++ TWG LG + HG +P + +++ A G
Sbjct: 106 GSGPHIVLATTEG-EVFTWGHNAYSQLGNG---TTNHGLVPCHISTNLSNKQVIEVACGS 161
Query: 108 AHCVAVTEGGEVYTWGWKECVPSGRVFGDLST 139
H + +T GEV+ WG+ SG+V G ST
Sbjct: 162 YHSLVLTSDGEVFAWGYNN---SGQV-GSGST 189
>UNIPROTKB|F1PBB3 [details] [associations]
symbol:HERC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:HIFAGTY EMBL:AAEX03016752
EMBL:AAEX03016750 EMBL:AAEX03016751 Ensembl:ENSCAFT00000015531
Uniprot:F1PBB3
Length = 1018
Score = 210 (79.0 bits), Expect = 4.5e-18, Sum P(2) = 4.5e-18
Identities = 54/172 (31%), Positives = 84/172 (48%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDELSPNCVSSLLGIQIEGVAAG 360
+K ++CG HS +++ G + ++G GQ G G + SP V SL GI + VAAG
Sbjct: 131 IKQVSCGHYHSLALSEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRSLDGIPLAQVAAG 190
Query: 361 LWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLP-RLLDAPSLENVHSKSVSCGARHTA 419
H+ +S G + + + +L+N+ +SCG HT
Sbjct: 191 GAHSFALSLSGTSFGWGRNNAGQLALHKNNVSGQSYKPYSISALKNLGVIYISCGYEHTV 250
Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
V+ +GKVF +G N YGQLG +++ P V I+G V + + CG +HTL
Sbjct: 251 VLTQNGKVFTFGDNTYGQLGHSPTAEKSGPQLVEGIDGLVSQ-IDCGSYHTL 301
Score = 170 (64.9 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 53/197 (26%), Positives = 90/197 (45%)
Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ-GSTDDELSP 343
RG V+ G + G ++ A G RHS ++ G + + G GQ GQ G+
Sbjct: 10 RGPVSRRRVG--LGGVELRQAASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQLK 67
Query: 344 NCVSSLLGIQIEGVAAGLWHTICISSDGDVYA-XXXXXXXXXXXXXDQAETLPRLLDAPS 402
+ +L + ++ V+ G H++ + G V+A + +P + +
Sbjct: 68 ERIRALETLHVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLIP--MKIKT 125
Query: 403 LENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNI-PSQV-TIEGCVPR 460
L ++ K VSCG H+ +++ G+VF WG N GQLGLG P +V +++G
Sbjct: 126 LNDIKIKQVSCGHYHSLALSEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRSLDGIPLA 185
Query: 461 NVACGWWHTLLLAVPPT 477
VA G H+ L++ T
Sbjct: 186 QVAAGGAHSFALSLSGT 202
Score = 160 (61.4 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 45/178 (25%), Positives = 85/178 (47%)
Query: 301 YVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGS-TDDELSPNCVSSLLGIQIEGVAA 359
+V ++CG HS + G + +G G GQ G G + L P + +L I+I+ V+
Sbjct: 77 HVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLIPMKIKTLNDIKIKQVSC 136
Query: 360 GLWHTICISSDGDVYAXXXXXXXXXXXXXD-QAETLPRLLDAPSLENVHSKSVSCGARHT 418
G +H++ +S G V++ ++ P+ + SL+ + V+ G H+
Sbjct: 137 GHYHSLALSEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVR--SLDGIPLAQVAAGGAHS 194
Query: 419 AVIADDGKVFCWGWNKYGQLGL--GDVIDRNI-PSQVT-IEGCVPRNVACGWWHTLLL 472
++ G F WG N GQL L +V ++ P ++ ++ ++CG+ HT++L
Sbjct: 195 FALSLSGTSFGWGRNNAGQLALHKNNVSGQSYKPYSISALKNLGVIYISCGYEHTVVL 252
Score = 88 (36.0 bits), Expect = 4.5e-18, Sum P(2) = 4.5e-18
Identities = 28/106 (26%), Positives = 53/106 (50%)
Query: 22 GALPQR-SPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYV 80
G L QR +P + L R+ + + D+ G ++A+ ++ WG+ + GQ +
Sbjct: 53 GQLGQRGAPCSAQLKERIR-ALETLHVDLVSCGKEHSLAVCHKGRVFAWGAGSE-GQ--L 108
Query: 81 TSGKHGE---IPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
+G+ E IP + I + + G H +A++EGG+V++WG
Sbjct: 109 GTGEFKETNLIPMKIKTLNDIKIKQVSCGHYHSLALSEGGQVFSWG 154
Score = 46 (21.3 bits), Expect = 1.6e-13, Sum P(3) = 1.6e-13
Identities = 11/23 (47%), Positives = 16/23 (69%)
Query: 216 TLNPGVRIATVAAGGRHTLALSD 238
TLN ++I V+ G H+LALS+
Sbjct: 125 TLND-IKIKQVSCGHYHSLALSE 146
Score = 40 (19.1 bits), Expect = 4.4e-13, Sum P(2) = 4.4e-13
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 220 GVRIATVAAGGRHTLAL 236
GV + A+G RH+L L
Sbjct: 22 GVELRQAASGERHSLLL 38
Score = 38 (18.4 bits), Expect = 1.6e-13, Sum P(3) = 1.6e-13
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 102 KAAAGWAHCVAVTEGGEVYTWG 123
+AA+G H + + G+V++ G
Sbjct: 27 QAASGERHSLLLLSNGQVHSCG 48
>ZFIN|ZDB-GENE-070718-6 [details] [associations]
symbol:herc2 "hect domain and RLD 2" species:7955
"Danio rerio" [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0006464 "cellular protein modification
process" evidence=IEA] [GO:0020037 "heme binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00632
InterPro:IPR000433 InterPro:IPR000569 InterPro:IPR001199
InterPro:IPR009060 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-070718-6
GO:GO:0046872 GO:GO:0008270 GO:GO:0020037 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 InterPro:IPR006624 SMART:SM00706
EMBL:CABZ01006344 EMBL:CABZ01006345 EMBL:CABZ01006346 EMBL:FP085470
IPI:IPI00495163 Ensembl:ENSDART00000110770 Uniprot:E7EYK8
Length = 4832
Score = 203 (76.5 bits), Expect = 5.1e-18, Sum P(4) = 5.1e-18
Identities = 55/173 (31%), Positives = 81/173 (46%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
G V IA GG HSA IT +G L T+G G YG+ G G ++D+L P V +L G ++ VA
Sbjct: 4088 GVEVVDIAAGGAHSACITASGELYTWGKGRYGRLGHGDSEDQLKPKLVEALQGHRVIDVA 4147
Query: 359 AGLW--HTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGAR 416
G T+C++ D V++ +P +D SL + V CG++
Sbjct: 4148 CGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQ 4205
Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWH 468
+ + G V+ WG Y +LG G P QV ++G +A G H
Sbjct: 4206 FSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4258
Score = 203 (76.5 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 53/180 (29%), Positives = 90/180 (50%)
Query: 296 RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
R G V IACG +SA IT G L T+G G YG+ G GS++D+ +P V++L G+++
Sbjct: 537 RPVGKQVVHIACGSTYSAAITADGELHTWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVI 596
Query: 356 GVAAGLW--HTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSC 413
VA G T+ ++ +G V++ P+L++ L+++ V C
Sbjct: 597 DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVE--KLQDLDIVKVCC 654
Query: 414 GARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLL 472
G++ + + DG+V+ WG +LG G P + +++G ++A G H L L
Sbjct: 655 GSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKRVVDIAVGSTHCLAL 714
Score = 184 (69.8 bits), Expect = 1.6e-15, Sum P(5) = 1.6e-15
Identities = 45/170 (26%), Positives = 82/170 (48%)
Query: 301 YVKGIAC--GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
+++ +A GG+H ++ G L ++G G+ G G+ P + SL G+++ +A
Sbjct: 4036 FIRKVAVNSGGKHCLALSSEGELYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIA 4095
Query: 359 AGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGA--R 416
AG H+ CI++ G++Y + + P+L++A L+ V+CG+
Sbjct: 4096 AGGAHSACITASGELYTWGKGRYGRLGHGDSEDQLKPKLVEA--LQGHRVIDVACGSGDA 4153
Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
T + DD V+ WG YG+LG G +P ++ ++ G V CG
Sbjct: 4154 QTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECG 4203
Score = 183 (69.5 bits), Expect = 1.1e-15, Sum P(4) = 1.1e-15
Identities = 56/203 (27%), Positives = 88/203 (43%)
Query: 274 SYGKDRSAALSRGSVNSE-GPGF--RVPGNYVKGIACGG--RHSAVITDAGALLTFGWGL 328
++GK R L G + P + G+ V +ACG + +TD + ++G G
Sbjct: 4112 TWGKGRYGRLGHGDSEDQLKPKLVEALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGD 4171
Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXX 388
YG+ G+G +D P + SL G+ + V G ++ ++ G VY
Sbjct: 4172 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS 4231
Query: 389 DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNI 448
D PR + L+ +++ G+ H +DG+V+ WG N GQLG G
Sbjct: 4232 DDHVRRPRQVQG--LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR 4289
Query: 449 PSQVT-IEGCVPRNVACGWWHTL 470
P V ++G VACG HTL
Sbjct: 4290 PRLVAALQGKKINRVACGSAHTL 4312
Score = 176 (67.0 bits), Expect = 2.1e-14, Sum P(3) = 2.1e-14
Identities = 58/209 (27%), Positives = 94/209 (44%)
Query: 270 CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYV-KGIAC--GGRHSAVITDAGALLTFGW 326
C E++ G+ LS G++ NYV K +A GGRH+ +T G + ++G
Sbjct: 3012 CGEATNGR-LGLGLSSGTIPIPRQ-ISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGE 3069
Query: 327 GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXX 386
G G+ G S + P + +L +I +A G H+ I+S G++Y+
Sbjct: 3070 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGH 3129
Query: 387 XXDQAETLPRLLDAPSLENVHSKSVSCGAR--HTAVIADDGKVFCWGWNKYGQLGLGDVI 444
+ + P+L+ L V+CG+R T + D+G VF WG +G+LG G
Sbjct: 3130 GDNTTQLRPKLVKV--LLGHRVVQVACGSRDAQTLALTDEGMVFSWGDGDFGKLGRGGSE 3187
Query: 445 DRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
NIP + + G + CG +L L
Sbjct: 3188 GCNIPQNIERLNGQGVCQIECGAQFSLAL 3216
Score = 166 (63.5 bits), Expect = 1.8e-12, Sum P(4) = 1.8e-12
Identities = 46/175 (26%), Positives = 79/175 (45%)
Query: 299 GNYVKGIACGGR--HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG 356
G+ V +ACG R + +TD G + ++G G +G+ G+G ++ P + L G +
Sbjct: 3146 GHRVVQVACGSRDAQTLALTDEGMVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQ 3205
Query: 357 VAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGAR 416
+ G ++ ++ G V+ D P++++ L V+ GA
Sbjct: 3206 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEG--LRGKKIVHVAVGAL 3263
Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
H + + G+VF WG N +GQ G G P+ V +EG VACG H++
Sbjct: 3264 HCLAVTETGQVFAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3318
Score = 163 (62.4 bits), Expect = 6.5e-10, Sum P(3) = 6.5e-10
Identities = 43/165 (26%), Positives = 73/165 (44%)
Query: 274 SYGKDRSAALSRGSVNSEGPGFRVP---GNYVKGIACGG--RHSAVITDAGALLTFGWGL 328
++G+ L GS + V G V +ACG + +T+ G + ++G G
Sbjct: 564 TWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 623
Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXX 388
YG+ G+G +D +P V L + I V G ++ ++ DG VY
Sbjct: 624 YGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGT 683
Query: 389 DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWN 433
D+ P+LLD SL+ ++ G+ H + ++G+V WG N
Sbjct: 684 DEHVRYPKLLD--SLQGKRVVDIAVGSTHCLALTEEGEVHSWGSN 726
Score = 138 (53.6 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 36/139 (25%), Positives = 67/139 (48%)
Query: 309 GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSL----LGIQIEGVAAGLWHT 364
G+H ++ G + ++G G G+ G G T P +S +G Q+ +A G ++
Sbjct: 494 GQHYLALSVNGEVFSWGCGDGGRLGHGDTTYLEEPTMISVFSGRPVGKQVVHIACGSTYS 553
Query: 365 ICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGA--RHTAVIA 422
I++DG+++ + +T P L+ A L+ + V+CG+ T +
Sbjct: 554 AAITADGELHTWGRGNYGRLGHGSSEDQTTPMLVTA--LKGLKVIDVACGSGDAQTLAVT 611
Query: 423 DDGKVFCWGWNKYGQLGLG 441
++G+V+ WG YG+LG G
Sbjct: 612 ENGQVWSWGDGDYGKLGRG 630
Score = 131 (51.2 bits), Expect = 1.8e-09, Sum P(5) = 1.8e-09
Identities = 43/150 (28%), Positives = 61/150 (40%)
Query: 274 SYGKDRSAALSRGSVNSEGPGF-----RVPGNYVKGIACGGRHSAVITDAGALLTFGWGL 328
S+G L RG SEG R+ G V I CG + S +T +G + T+G G
Sbjct: 3172 SWGDGDFGKLGRGG--SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3229
Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXX 388
Y + G G+ P V L G +I VA G H + ++ G V+A
Sbjct: 3230 YFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTETGQVFAWGDNDHGQQGNGT 3289
Query: 389 DQAETLPRLLDAPSLENVHSKSVSCGARHT 418
P L+ LE V+CG+ H+
Sbjct: 3290 TTVNRKPTLVQG--LEGQKITRVACGSSHS 3317
Score = 120 (47.3 bits), Expect = 2.9e-08, Sum P(3) = 2.9e-08
Identities = 41/151 (27%), Positives = 65/151 (43%)
Query: 324 FGWGLYG--QCGQGSTDDELS-PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXX 380
F WGL Q G G ++ P+ +L + + VA G ++++G VYA
Sbjct: 2958 FVWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTAEGKVYACGEAT 3016
Query: 381 XXXXXXXXDQAET-LPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG 439
+PR + A S V +V G RH + DGKVF WG G+LG
Sbjct: 3017 NGRLGLGLSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLG 3076
Query: 440 LGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
++ + P + ++ R++ACG H+
Sbjct: 3077 HFSRMNCDKPRLIEALKTKRIRDIACGSSHS 3107
Score = 118 (46.6 bits), Expect = 3.5e-06, Sum P(4) = 3.5e-06
Identities = 27/110 (24%), Positives = 50/110 (45%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
+ CG + S +T G + T+G G + G G+ + P + SL G ++ +A G H
Sbjct: 652 VCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKRVVDIAVGSTHC 711
Query: 365 ICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCG 414
+ ++ +G+V++ + P+ L P L + H +SCG
Sbjct: 712 LALTEEGEVHSWGSNDKLQHFDTLFSNKKQPKAL--PGLNSKHIVGISCG 759
Score = 111 (44.1 bits), Expect = 5.1e-18, Sum P(4) = 5.1e-18
Identities = 25/75 (33%), Positives = 40/75 (53%)
Query: 49 VCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWA 108
VC G F++A++ ++ TWG D+ + T +H P+ +V A G
Sbjct: 652 VCCGS-QFSVALTKDGQVYTWGKGDNQRLGHGTD-EHVRYPKLLDSLQGKRVVDIAVGST 709
Query: 109 HCVAVTEGGEVYTWG 123
HC+A+TE GEV++WG
Sbjct: 710 HCLALTEEGEVHSWG 724
Score = 111 (44.1 bits), Expect = 1.9e-07, Sum P(5) = 1.9e-07
Identities = 35/161 (21%), Positives = 77/161 (47%)
Query: 315 ITDAGALLTFGWGLY--GQCG--QGSTDDELSPN-CVSSLLGIQIEGVAAGLWHTICISS 369
++ G+ +GWG GQ G +G+ +P +++L +Q+ G L+ +++
Sbjct: 3944 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLF---AVTA 4000
Query: 370 DGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFC 429
DG +YA ++ + P LL++ + +V+ G +H ++ +G+++
Sbjct: 4001 DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGELYS 4060
Query: 430 WGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
WG + G+LG G+ + P + ++ G ++A G H+
Sbjct: 4061 WGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHS 4101
Score = 109 (43.4 bits), Expect = 5.6e-18, Sum P(3) = 5.6e-18
Identities = 28/77 (36%), Positives = 38/77 (49%)
Query: 49 VCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAG 106
VC CG F++A++ S + TWG D + T H P+ IV A G
Sbjct: 3203 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTD-VHVRKPQMVEGLRGKKIVHVAVG 3261
Query: 107 WAHCVAVTEGGEVYTWG 123
HC+AVTE G+V+ WG
Sbjct: 3262 ALHCLAVTETGQVFAWG 3278
Score = 100 (40.3 bits), Expect = 2.1e-14, Sum P(3) = 2.1e-14
Identities = 27/80 (33%), Positives = 42/80 (52%)
Query: 48 DV-CGGGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHG-EIPEPFPLPTEASIVKA 103
DV CG G +A++++ ++ +WG D LG+ G G + P+ + IVK
Sbjct: 597 DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG----GSDGCKTPKLVEKLQDLDIVKV 652
Query: 104 AAGWAHCVAVTEGGEVYTWG 123
G VA+T+ G+VYTWG
Sbjct: 653 CCGSQFSVALTKDGQVYTWG 672
Score = 100 (40.3 bits), Expect = 1.1e-06, Sum P(4) = 1.1e-06
Identities = 26/71 (36%), Positives = 36/71 (50%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
G V IA G H T+ G + T+G GQ G G+T+ P V++L G +I VA
Sbjct: 4246 GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVA 4305
Query: 359 AGLWHTICISS 369
G HT+ S+
Sbjct: 4306 CGSAHTLAWST 4316
Score = 98 (39.6 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 27/80 (33%), Positives = 38/80 (47%)
Query: 48 DV-CGGGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHG-EIPEPFPLPTEASIVKA 103
DV CG G + ++D + +WG D LG+ G G ++P T +VK
Sbjct: 4145 DVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRG----GSDGCKVPMKIDSLTGLGVVKV 4200
Query: 104 AAGWAHCVAVTEGGEVYTWG 123
G VA+T+ G VYTWG
Sbjct: 4201 ECGSQFSVALTKSGAVYTWG 4220
Score = 97 (39.2 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 31/99 (31%), Positives = 45/99 (45%)
Query: 49 VCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPT--EASIVKAAAG 106
V GG +A+S +L +WG +D G+ + G P + + +V AAG
Sbjct: 4042 VNSGG-KHCLALSSEGELYSWGEAED-GK--LGHGNRSPCDRPRVIESLRGVEVVDIAAG 4097
Query: 107 WAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDK 145
AH +T GE+YTWG GR +G L G D+
Sbjct: 4098 GAHSACITASGELYTWG------KGR-YGRLGHGDSEDQ 4129
Score = 94 (38.1 bits), Expect = 9.6e-06, Sum P(5) = 9.6e-06
Identities = 29/97 (29%), Positives = 44/97 (45%)
Query: 274 SYGKDRSAALSRGS-VNSEGP----GFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL 328
++GK L G+ V+ P G R G + +A G H +T+ G + +G
Sbjct: 3224 TWGKGDYFRLGHGTDVHVRKPQMVEGLR--GKKIVHVAVGALHCLAVTETGQVFAWGDND 3281
Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTI 365
+GQ G G+T P V L G +I VA G H++
Sbjct: 3282 HGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3318
Score = 93 (37.8 bits), Expect = 3.0e-08, Sum P(4) = 3.0e-08
Identities = 31/92 (33%), Positives = 44/92 (47%)
Query: 49 VCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWA 108
V GG AMA++ K+ +WG DD G+ S + + P I A G +
Sbjct: 3048 VHSGG-RHAMALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3105
Query: 109 HCVAVTEGGEVYTWGWKECVPSGRV-FGDLST 139
H A+T GE+Y+WG E GR+ GD +T
Sbjct: 3106 HSAAITSSGELYSWGLGEY---GRLGHGDNTT 3134
Score = 77 (32.2 bits), Expect = 1.0e-14, Sum P(3) = 1.0e-14
Identities = 20/75 (26%), Positives = 33/75 (44%)
Query: 50 CGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHG-EIPEPFPLPTEASIVKAAAGWA 108
CG +A++D + +WG D G+ G G IP+ + + G
Sbjct: 3154 CGSRDAQTLALTDEGMVFSWGD-GDFGK-LGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 3211
Query: 109 HCVAVTEGGEVYTWG 123
+A+T+ G V+TWG
Sbjct: 3212 FSLALTKSGVVWTWG 3226
Score = 77 (32.2 bits), Expect = 6.5e-10, Sum P(3) = 6.5e-10
Identities = 26/100 (26%), Positives = 44/100 (44%)
Query: 27 RSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDD--LGQSYVTSGK 84
+S L+P++V LT + +A+S + ++ +WG D LG T +
Sbjct: 468 KSTTLAPMLVHA-LTSRKIMKLAAHPDGQHYLALSVNGEVFSWGCGDGGRLGHGDTTYLE 526
Query: 85 HGEIPEPFP-LPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
+ F P +V A G + A+T GE++TWG
Sbjct: 527 EPTMISVFSGRPVGKQVVHIACGSTYSAAITADGELHTWG 566
Score = 70 (29.7 bits), Expect = 5.2e-06, Sum P(4) = 5.2e-06
Identities = 26/87 (29%), Positives = 39/87 (44%)
Query: 55 GFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVT 114
G A + K+ WG +D Q G ++P + ++V+ A G AVT
Sbjct: 2946 GLESAATIRTKVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT 3004
Query: 115 EGGEVYTWGWKECVPSGRVFGDLSTGT 141
G+VY G E +GR+ LS+GT
Sbjct: 3005 AEGKVYACG--EAT-NGRLGLGLSSGT 3028
Score = 65 (27.9 bits), Expect = 1.7e-13, Sum P(3) = 1.7e-13
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 101 VKAAAGWAHCVAVTEGGEVYTWGWKE 126
V +G HC+A++ GE+Y+WG E
Sbjct: 4040 VAVNSGGKHCLALSSEGELYSWGEAE 4065
Score = 60 (26.2 bits), Expect = 4.8e-05, Sum P(4) = 4.8e-05
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 86 GEIPEPFPLPTEAS-IVKAAA---GWAHCVAVTEGGEVYTWG 123
G IP P + ++ +VK A G H +A+T G+V++WG
Sbjct: 3027 GTIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWG 3068
Score = 59 (25.8 bits), Expect = 3.5e-06, Sum P(4) = 3.5e-06
Identities = 22/77 (28%), Positives = 37/77 (48%)
Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR-NIPSQVT-IEGCVP 459
+L ++ V+ G++ + +GKV+ G G+LGLG IP Q++ + V
Sbjct: 2984 TLSALNVVQVAGGSKSLFAVTAEGKVYACGEATNGRLGLGLSSGTIPIPRQISALSNYVV 3043
Query: 460 RNVAC--GWWHTLLLAV 474
+ VA G H + L V
Sbjct: 3044 KKVAVHSGGRHAMALTV 3060
Score = 55 (24.4 bits), Expect = 5.1e-18, Sum P(4) = 5.1e-18
Identities = 16/37 (43%), Positives = 19/37 (51%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGR--HTLALSD 238
GD P LV + G R+ VA G R TLAL+D
Sbjct: 3130 GDNTTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTD 3166
Score = 53 (23.7 bits), Expect = 2.1e-14, Sum P(3) = 2.1e-14
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 205 DENLSAFPCLVTLNPGVRIATVAAGGRHTLALSD 238
DE++ +P L+ G R+ +A G H LAL++
Sbjct: 684 DEHVR-YPKLLDSLQGKRVVDIAVGSTHCLALTE 716
Score = 51 (23.0 bits), Expect = 1.0e-11, Sum P(4) = 1.0e-11
Identities = 16/64 (25%), Positives = 29/64 (45%)
Query: 53 GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAG------ 106
G +A+++ ++ +WGS D L Q + T + + P+ P IV + G
Sbjct: 707 GSTHCLALTEEGEVHSWGSNDKL-QHFDTLFSNKKQPKALPGLNSKHIVGISCGPGQSFS 765
Query: 107 WAHC 110
W+ C
Sbjct: 766 WSSC 769
Score = 49 (22.3 bits), Expect = 5.6e-18, Sum P(3) = 5.6e-18
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 198 AESSSSGDENLSAF--PCLVTLNPGVRIATVAAGGRHTLALS 237
AE G N S P ++ GV + +AAGG H+ ++
Sbjct: 4064 AEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACIT 4105
Score = 47 (21.6 bits), Expect = 3.3e-17, Sum P(4) = 3.3e-17
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 204 GDENLSAFPCLVTL-NPGVRIATVAAGGRHTLALS 237
G E++S L ++ + +R V +GG+H LALS
Sbjct: 4019 GTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALS 4053
Score = 47 (21.6 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 16/69 (23%), Positives = 27/69 (39%)
Query: 56 FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTE 115
+ ++ S + WG + GQ G ++P P V+ G AVT
Sbjct: 3942 WTLSAGGSGTIYGWGH-NHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTA 4000
Query: 116 GGEVYTWGW 124
G++Y G+
Sbjct: 4001 DGKLYATGY 4009
Score = 46 (21.3 bits), Expect = 6.5e-10, Sum P(3) = 6.5e-10
Identities = 9/14 (64%), Positives = 9/14 (64%)
Query: 426 KVFCWGWNKYGQLG 439
KVF WG N QLG
Sbjct: 2956 KVFVWGLNDKDQLG 2969
Score = 44 (20.5 bits), Expect = 5.1e-11, Sum P(4) = 5.1e-11
Identities = 15/62 (24%), Positives = 27/62 (43%)
Query: 53 GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
G +A++++ ++ WG D Q T+ + + P I + A G +H VA
Sbjct: 3261 GALHCLAVTETGQVFAWGDNDHGQQGNGTTTVNRK-PTLVQGLEGQKITRVACGSSHSVA 3319
Query: 113 VT 114
T
Sbjct: 3320 WT 3321
Score = 43 (20.2 bits), Expect = 3.5e-06, Sum P(4) = 3.5e-06
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 212 PCLVTLNPGVRIATVAAGG--RHTLALSD 238
P LVT G+++ VA G TLA+++
Sbjct: 584 PMLVTALKGLKVIDVACGSGDAQTLAVTE 612
Score = 42 (19.8 bits), Expect = 1.8e-12, Sum P(4) = 1.8e-12
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 221 VRIATVAAGGRHTLALS 237
V+ V +GGRH +AL+
Sbjct: 3043 VKKVAVHSGGRHAMALT 3059
Score = 40 (19.1 bits), Expect = 1.0e-11, Sum P(4) = 1.0e-11
Identities = 6/12 (50%), Positives = 7/12 (58%)
Query: 114 TEGGEVYTWGWK 125
T G V WGW+
Sbjct: 3690 TSDGSVNGWGWR 3701
Score = 39 (18.8 bits), Expect = 2.1e-16, Sum P(4) = 2.1e-16
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 220 GVRIATVAAGGRHTLALSD 238
G +I VA G H LA+++
Sbjct: 3252 GKKIVHVAVGALHCLAVTE 3270
Score = 39 (18.8 bits), Expect = 1.6e-15, Sum P(5) = 1.6e-15
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 299 GNYVKGIACGGRHSAVIT 316
G + +ACG HS T
Sbjct: 3304 GQKITRVACGSSHSVAWT 3321
Score = 38 (18.4 bits), Expect = 1.8e-09, Sum P(5) = 1.8e-09
Identities = 6/9 (66%), Positives = 6/9 (66%)
Query: 424 DGKVFCWGW 432
DG V WGW
Sbjct: 3692 DGSVNGWGW 3700
Score = 37 (18.1 bits), Expect = 5.1e-18, Sum P(4) = 5.1e-18
Identities = 5/14 (35%), Positives = 8/14 (57%)
Query: 123 GWKECVPSGRVFGD 136
GW+ +P G G+
Sbjct: 1688 GWQRVIPEGTNIGE 1701
>UNIPROTKB|G3MX12 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0020037 "heme binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0046872 GO:GO:0008270
GO:GO:0020037 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 InterPro:IPR006624 SMART:SM00706
EMBL:DAAA02003804 EMBL:DAAA02003805 Ensembl:ENSBTAT00000063010
Uniprot:G3MX12
Length = 4757
Score = 210 (79.0 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 54/177 (30%), Positives = 87/177 (49%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
G +V IACG +SA IT G L T+G G YG+ G GS++DE P V+ L G+++ VA
Sbjct: 461 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 520
Query: 359 AGLW--HTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGAR 416
G T+ ++ +G V++ P+L++ L+++ V CG++
Sbjct: 521 CGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE--KLQDLDVVKVRCGSQ 578
Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
+ + DG+V+ WG +LG G P + ++G +VA G H L L
Sbjct: 579 FSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 635
Score = 203 (76.5 bits), Expect = 5.3e-18, Sum P(3) = 5.3e-18
Identities = 53/173 (30%), Positives = 80/173 (46%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
G V +A GG HSA +T AG L T+G G YG+ G ++D+L P V +L G ++ VA
Sbjct: 4013 GTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVA 4072
Query: 359 AGLW--HTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGAR 416
G T+C++ D V++ +P +D SL + V CG++
Sbjct: 4073 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQ 4130
Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWH 468
+ + G V+ WG Y +LG G P QV ++G +A G H
Sbjct: 4131 FSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4183
Score = 184 (69.8 bits), Expect = 4.6e-15, Sum P(5) = 4.6e-15
Identities = 46/170 (27%), Positives = 81/170 (47%)
Query: 301 YVKGIAC--GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
++K +A GG+H ++ G + ++G G+ G G+ P + SL G ++ VA
Sbjct: 3961 FIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVA 4020
Query: 359 AGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGA--R 416
AG H+ C+++ GD+Y + + P+L++A L+ V+CG+
Sbjct: 4021 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA--LQGHRVVDVACGSGDA 4078
Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
T + DD V+ WG YG+LG G +P ++ ++ G V CG
Sbjct: 4079 QTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECG 4128
Score = 181 (68.8 bits), Expect = 5.4e-15, Sum P(4) = 5.4e-15
Identities = 55/203 (27%), Positives = 88/203 (43%)
Query: 274 SYGKDRSAALSRGSVNSE-GPGF--RVPGNYVKGIACGG--RHSAVITDAGALLTFGWGL 328
++GK R L + P + G+ V +ACG + +TD + ++G G
Sbjct: 4037 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGD 4096
Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXX 388
YG+ G+G +D P + SL G+ + V G ++ ++ G VY
Sbjct: 4097 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS 4156
Query: 389 DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNI 448
D PR + L+ +++ G+ H ++DG+V+ WG N GQLG G
Sbjct: 4157 DDHVRRPRQVQG--LQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQR 4214
Query: 449 PSQVT-IEGCVPRNVACGWWHTL 470
P V ++G VACG HTL
Sbjct: 4215 PRLVAALQGKKVNRVACGSAHTL 4237
Score = 168 (64.2 bits), Expect = 5.1e-13, Sum P(3) = 5.1e-13
Identities = 54/208 (25%), Positives = 92/208 (44%)
Query: 270 CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIAC--GGRHSAVITDAGALLTFGWG 327
C E++ G+ +S G+V + VK +A GGRH+ +T G + ++G G
Sbjct: 2937 CGEATNGR-LGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 2995
Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXX 387
G+ G S + P + +L +I +A G H+ ++S G++Y
Sbjct: 2996 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHG 3055
Query: 388 XDQAETLPRLLDAPSLENVHSKSVSCGAR--HTAVIADDGKVFCWGWNKYGQLGLGDVID 445
+ + P+++ L V+CG+R T + D+G VF WG +G+LG G
Sbjct: 3056 DNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEG 3113
Query: 446 RNIPSQVT-IEGCVPRNVACGWWHTLLL 472
NIP + + G + CG +L L
Sbjct: 3114 CNIPQNIERLNGQGVCQIECGAQFSLAL 3141
Score = 164 (62.8 bits), Expect = 8.8e-12, Sum P(4) = 8.8e-12
Identities = 46/175 (26%), Positives = 79/175 (45%)
Query: 299 GNYVKGIACGGR--HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG 356
G+ V +ACG R + +TD G + ++G G +G+ G+G ++ P + L G +
Sbjct: 3071 GHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQ 3130
Query: 357 VAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGAR 416
+ G ++ ++ G V+ D P++++ L V+ GA
Sbjct: 3131 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG--LRGKKIVHVAVGAL 3188
Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
H + D G+V+ WG N +GQ G G P+ V +EG VACG H++
Sbjct: 3189 HCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3243
Score = 154 (59.3 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 48/202 (23%), Positives = 86/202 (42%)
Query: 274 SYGKDRSAALSRGSVNSEGPGFRVPGNYVKG-----IACGG--RHSAVITDAGALLTFGW 326
++G+ L GS E V G +KG +ACG + +T+ G + ++G
Sbjct: 485 TWGRGNYGRLGHGSSEDEAIPMLVAG--LKGLKVIDVACGSGDAQTLAVTENGQVWSWGD 542
Query: 327 GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXX 386
G YG+ G+G +D +P + L + + V G ++ ++ DG VY+
Sbjct: 543 GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGH 602
Query: 387 XXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR 446
++ P+LL+ L+ V+ G+ H + +D +V WG N Q D +
Sbjct: 603 GTEEHVRYPKLLEG--LQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRV 658
Query: 447 NIPSQVTIEGCVPRNV---ACG 465
P + G +++ ACG
Sbjct: 659 TKPEPSALPGLDTKHIVGIACG 680
Score = 138 (53.6 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 39/149 (26%), Positives = 68/149 (45%)
Query: 300 NYVKGIA-CGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ----I 354
N VK A G H + G + ++G G G+ G G T P +S+ G Q +
Sbjct: 405 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 464
Query: 355 EGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCG 414
+A G ++ I+++G++Y + E +P L+ L+ + V+CG
Sbjct: 465 VHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV--AGLKGLKVIDVACG 522
Query: 415 A--RHTAVIADDGKVFCWGWNKYGQLGLG 441
+ T + ++G+V+ WG YG+LG G
Sbjct: 523 SGDAQTLAVTENGQVWSWGDGDYGKLGRG 551
Score = 137 (53.3 bits), Expect = 1.2e-09, Sum P(5) = 1.2e-09
Identities = 45/150 (30%), Positives = 61/150 (40%)
Query: 274 SYGKDRSAALSRGSVNSEGPGF-----RVPGNYVKGIACGGRHSAVITDAGALLTFGWGL 328
S+G L RG SEG R+ G V I CG + S +T +G + T+G G
Sbjct: 3097 SWGDGDFGKLGRGG--SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3154
Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXX 388
Y + G GS P V L G +I VA G H + ++ G VYA
Sbjct: 3155 YFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT 3214
Query: 389 DQAETLPRLLDAPSLENVHSKSVSCGARHT 418
P L+ LE V+CG+ H+
Sbjct: 3215 TTVNRKPTLVQG--LEGQKITRVACGSSHS 3242
Score = 123 (48.4 bits), Expect = 4.1e-08, Sum P(3) = 4.1e-08
Identities = 45/170 (26%), Positives = 72/170 (42%)
Query: 310 RHSAVITDAGALLT--FGWGLYG--QCGQGSTDDELS-PNCVSSLLGIQIEGVAAGLWHT 364
+ +A + A + T F WGL Q G G ++ P+ +L + + VA G
Sbjct: 2867 KKAAGLESAATIRTKVFVWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVAGGSKSL 2925
Query: 365 ICISSDGDVYAXXXXXXXXXXXXXDQAET-LPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
++ +G VYA +PR + A S V +V G RH +
Sbjct: 2926 FAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV 2985
Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLL 472
DGKVF WG G+LG ++ + P + ++ R++ACG H+ L
Sbjct: 2986 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3035
Score = 117 (46.2 bits), Expect = 1.2e-07, Sum P(5) = 1.2e-07
Identities = 40/163 (24%), Positives = 81/163 (49%)
Query: 315 ITDAGALLTFGWGLY--GQCG--QGSTDDELSP-NCVSSLLGIQIEGVAAGLWHTICISS 369
++ G+ +GWG GQ G +G+ +P +++L +Q+ G L+ +++
Sbjct: 3869 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLF---AVTA 3925
Query: 370 DGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSK--SVSCGARHTAVIADDGKV 427
DG +YA ++ + P LL+ S+++V K +V+ G +H ++ +G+V
Sbjct: 3926 DGKLYATGYGAGGRLGVGGTESVSTPTLLE--SIQHVFIKKVAVNSGGKHCLALSSEGEV 3983
Query: 428 FCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
+ WG + G+LG G+ + P + ++ G +VA G H+
Sbjct: 3984 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHS 4026
Score = 111 (44.1 bits), Expect = 5.3e-18, Sum P(3) = 5.3e-18
Identities = 28/77 (36%), Positives = 38/77 (49%)
Query: 49 VCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAG 106
VC CG F++A++ S + TWG D + S H P+ IV A G
Sbjct: 3128 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVG 3186
Query: 107 WAHCVAVTEGGEVYTWG 123
HC+AVT+ G+VY WG
Sbjct: 3187 ALHCLAVTDAGQVYAWG 3203
Score = 106 (42.4 bits), Expect = 7.7e-17, Sum P(4) = 7.7e-17
Identities = 24/78 (30%), Positives = 41/78 (52%)
Query: 48 DVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAA 105
DV CG F++A++ ++ +WG D+ + T +H P+ ++ AA
Sbjct: 569 DVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 627
Query: 106 GWAHCVAVTEGGEVYTWG 123
G HC+A+TE EV++WG
Sbjct: 628 GSTHCLALTEDSEVHSWG 645
Score = 104 (41.7 bits), Expect = 3.4e-06, Sum P(5) = 3.4e-06
Identities = 32/97 (32%), Positives = 45/97 (46%)
Query: 274 SYGKDRSAALSRGS-VNSEGP----GFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL 328
++GK L GS V+ P G R G + +A G H +TDAG + +G
Sbjct: 3149 TWGKGDYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQVYAWGDND 3206
Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTI 365
+GQ G G+T P V L G +I VA G H++
Sbjct: 3207 HGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3243
Score = 98 (39.6 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 27/80 (33%), Positives = 38/80 (47%)
Query: 48 DV-CGGGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHG-EIPEPFPLPTEASIVKA 103
DV CG G + ++D + +WG D LG+ G G ++P T +VK
Sbjct: 4070 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG----GSDGCKVPMKIDSLTGLGVVKV 4125
Query: 104 AAGWAHCVAVTEGGEVYTWG 123
G VA+T+ G VYTWG
Sbjct: 4126 ECGSQFSVALTKSGAVYTWG 4145
Score = 95 (38.5 bits), Expect = 5.1e-13, Sum P(3) = 5.1e-13
Identities = 25/80 (31%), Positives = 42/80 (52%)
Query: 48 DV-CGGGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHG-EIPEPFPLPTEASIVKA 103
DV CG G +A++++ ++ +WG D LG+ G G + P+ + +VK
Sbjct: 518 DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG----GSDGCKTPKLIEKLQDLDVVKV 573
Query: 104 AAGWAHCVAVTEGGEVYTWG 123
G VA+T+ G+VY+WG
Sbjct: 574 RCGSQFSVALTKDGQVYSWG 593
Score = 95 (38.5 bits), Expect = 1.0e-05, Sum P(4) = 1.0e-05
Identities = 24/71 (33%), Positives = 36/71 (50%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
G V IA G H ++ G + T+G GQ G G+T+ P V++L G ++ VA
Sbjct: 4171 GKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVA 4230
Query: 359 AGLWHTICISS 369
G HT+ S+
Sbjct: 4231 CGSAHTLAWST 4241
Score = 92 (37.4 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 24/77 (31%), Positives = 37/77 (48%)
Query: 49 VCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPT--EASIVKAAAG 106
V GG +A+S ++ +WG +D G+ + G P + + +V AAG
Sbjct: 3967 VNSGG-KHCLALSSEGEVYSWGEAED-GK--LGHGNRSPCDRPRVIESLRGTEVVDVAAG 4022
Query: 107 WAHCVAVTEGGEVYTWG 123
AH VT G++YTWG
Sbjct: 4023 GAHSACVTAAGDLYTWG 4039
Score = 89 (36.4 bits), Expect = 3.1e-08, Sum P(4) = 3.1e-08
Identities = 31/92 (33%), Positives = 43/92 (46%)
Query: 49 VCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWA 108
V GG A A++ K+ +WG DD G+ S + + P I A G +
Sbjct: 2973 VHSGG-RHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3030
Query: 109 HCVAVTEGGEVYTWGWKECVPSGRV-FGDLST 139
H A+T GE+YTWG E GR+ GD +T
Sbjct: 3031 HSAALTSSGELYTWGLGEY---GRLGHGDNTT 3059
Score = 78 (32.5 bits), Expect = 5.2e-07, Sum P(5) = 5.2e-07
Identities = 32/117 (27%), Positives = 50/117 (42%)
Query: 14 VFMWGYLPGALPQRS---PILSPLVVRLPLTVGSAWRDVCGGGCG--FAMAISDSRKLIT 68
V+ WG G P+ P V+ + A + V CG ++ AI+ +L T
Sbjct: 427 VYSWGCGDGGRLGHGDTVPLEEPKVISA-FSGKQAGKHVVHIACGSTYSAAITAEGELYT 485
Query: 69 WGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGW--AHCVAVTEGGEVYTWG 123
WG + G+ S + IP ++ A G A +AVTE G+V++WG
Sbjct: 486 WGR-GNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 541
Score = 76 (31.8 bits), Expect = 2.0e-14, Sum P(3) = 2.0e-14
Identities = 20/75 (26%), Positives = 33/75 (44%)
Query: 50 CGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHG-EIPEPFPLPTEASIVKAAAGWA 108
CG +A++D + +WG D G+ G G IP+ + + G
Sbjct: 3079 CGSRDAQTLALTDEGLVFSWGD-GDFGK-LGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 3136
Query: 109 HCVAVTEGGEVYTWG 123
+A+T+ G V+TWG
Sbjct: 3137 FSLALTKSGVVWTWG 3151
Score = 69 (29.3 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 18/69 (26%), Positives = 32/69 (46%)
Query: 58 MAISDSRKLITWGSTDD--LGQSYVTSGKHGEIPEPFPLPTEAS-IVKAAAGWAHCVAVT 114
+A++ + ++ +WG D LG + ++ F +V A G + A+T
Sbjct: 419 LALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT 478
Query: 115 EGGEVYTWG 123
GE+YTWG
Sbjct: 479 AEGELYTWG 487
Score = 68 (29.0 bits), Expect = 9.9e-13, Sum P(4) = 9.9e-13
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 101 VKAAAGWAHCVAVTEGGEVYTWGWKE 126
V +G HC+A++ GEVY+WG E
Sbjct: 3965 VAVNSGGKHCLALSSEGEVYSWGEAE 3990
Score = 67 (28.6 bits), Expect = 4.3e-06, Sum P(4) = 4.3e-06
Identities = 25/87 (28%), Positives = 39/87 (44%)
Query: 55 GFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVT 114
G A + K+ WG +D Q G ++P + ++V+ A G AVT
Sbjct: 2871 GLESAATIRTKVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT 2929
Query: 115 EGGEVYTWGWKECVPSGRVFGDLSTGT 141
G+VY G E +GR+ +S+GT
Sbjct: 2930 VEGKVYACG--EAT-NGRLGLGISSGT 2953
Score = 62 (26.9 bits), Expect = 1.3e-05, Sum P(4) = 1.3e-05
Identities = 23/78 (29%), Positives = 37/78 (47%)
Query: 52 GGCGFAMAISDSRKLITWGSTDD--LGQSYVTSGKHGEIPEPFPLPTEAS-IVKAAA--- 105
GG A++ K+ G + LG ++SG +P P + +S +VK A
Sbjct: 2920 GGSKSLFAVTVEGKVYACGEATNGRLGLG-ISSGT---VPIPRQITALSSYVVKKVAVHS 2975
Query: 106 GWAHCVAVTEGGEVYTWG 123
G H A+T G+V++WG
Sbjct: 2976 GGRHATALTVDGKVFSWG 2993
Score = 60 (26.2 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 18/41 (43%), Positives = 23/41 (56%)
Query: 99 SIVKAAA--GWAHCVAVTEGGEVYTWGWKECVPSGRV-FGD 136
+IVK AA H +A+ GEVY+WG C GR+ GD
Sbjct: 405 NIVKIAAHSDGHHYLALAATGEVYSWG---CGDGGRLGHGD 442
Score = 53 (23.7 bits), Expect = 5.1e-13, Sum P(3) = 5.1e-13
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSD 238
G E +P L+ G ++ VAAG H LAL++
Sbjct: 603 GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 637
Score = 52 (23.4 bits), Expect = 4.6e-15, Sum P(5) = 4.6e-15
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGR--HTLALSD 238
GD P +V + G R+ VA G R TLAL+D
Sbjct: 3055 GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3091
Score = 50 (22.7 bits), Expect = 0.00022, Sum P(5) = 0.00022
Identities = 21/67 (31%), Positives = 29/67 (43%)
Query: 48 DVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLP--TEASIVKAAA 105
DV G +A+++ ++ +WGS D Q + T PEP LP IV A
Sbjct: 624 DVAAGST-HCLALTEDSEVHSWGSNDQC-QHFDTL--RVTKPEPSALPGLDTKHIVGIAC 679
Query: 106 GWAHCVA 112
G A A
Sbjct: 680 GPAQSFA 686
Score = 47 (21.6 bits), Expect = 5.3e-18, Sum P(3) = 5.3e-18
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALS 237
G E++S P L+ V I VA +GG+H LALS
Sbjct: 3944 GTESVST-PTLLESIQHVFIKKVAVNSGGKHCLALS 3978
Score = 47 (21.6 bits), Expect = 1.8e-11, Sum P(3) = 1.8e-11
Identities = 16/62 (25%), Positives = 27/62 (43%)
Query: 53 GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
G +A++D+ ++ WG D Q T+ + + P I + A G +H VA
Sbjct: 3186 GALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRK-PTLVQGLEGQKITRVACGSSHSVA 3244
Query: 113 VT 114
T
Sbjct: 3245 WT 3246
Score = 47 (21.6 bits), Expect = 1.8e-11, Sum P(3) = 1.8e-11
Identities = 16/69 (23%), Positives = 27/69 (39%)
Query: 56 FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTE 115
+ ++ S + WG + GQ G ++P P V+ G AVT
Sbjct: 3867 WTLSAGGSGTIYGWGH-NHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTA 3925
Query: 116 GGEVYTWGW 124
G++Y G+
Sbjct: 3926 DGKLYATGY 3934
Score = 45 (20.9 bits), Expect = 7.7e-17, Sum P(4) = 7.7e-17
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 198 AESSSSGDENLSAF--PCLVTLNPGVRIATVAAGGRHTLALS 237
AE G N S P ++ G + VAAGG H+ ++
Sbjct: 3989 AEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVT 4030
Score = 43 (20.2 bits), Expect = 1.2e-16, Sum P(4) = 1.2e-16
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 220 GVRIATVAAGGRHTLALSD 238
G +I VA G H LA++D
Sbjct: 3177 GKKIVHVAVGALHCLAVTD 3195
Score = 43 (20.2 bits), Expect = 2.0e-05, Sum P(4) = 2.0e-05
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 202 SSGDENLSAFPCLVTLNPGVRIATVAAGG--RHTLALSD 238
SS DE A P LV G+++ VA G TLA+++
Sbjct: 498 SSEDE---AIPMLVAGLKGLKVIDVACGSGDAQTLAVTE 533
Score = 40 (19.1 bits), Expect = 7.7e-17, Sum P(4) = 7.7e-17
Identities = 10/35 (28%), Positives = 15/35 (42%)
Query: 123 GWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTE 157
GW+ +P G G+ T D D+ + L E
Sbjct: 1611 GWQRLIPEGIDIGEPLTDCLKDVDLIPPFNRMLLE 1645
Score = 39 (18.8 bits), Expect = 4.6e-15, Sum P(5) = 4.6e-15
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 299 GNYVKGIACGGRHSAVIT 316
G + +ACG HS T
Sbjct: 3229 GQKITRVACGSSHSVAWT 3246
Score = 39 (18.8 bits), Expect = 8.8e-12, Sum P(4) = 8.8e-12
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 221 VRIATVAAGGRHTLALS 237
V+ V +GGRH AL+
Sbjct: 2968 VKKVAVHSGGRHATALT 2984
Score = 38 (18.4 bits), Expect = 1.2e-09, Sum P(5) = 1.2e-09
Identities = 6/9 (66%), Positives = 6/9 (66%)
Query: 424 DGKVFCWGW 432
DG V WGW
Sbjct: 3617 DGSVNGWGW 3625
Score = 37 (18.1 bits), Expect = 9.9e-13, Sum P(4) = 9.9e-13
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 68 TWGSTDDLGQSYVTSGKHGE 87
T+G ++ GQS + G+ G+
Sbjct: 2667 TFGRINEPGQSAIFCGRSGK 2686
>UNIPROTKB|E1B782 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0032183 "SUMO binding" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006281 GO:GO:0007283
GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 GeneTree:ENSGT00700000104208
OMA:QLAFTRD InterPro:IPR006624 SMART:SM00706 EMBL:DAAA02003804
EMBL:DAAA02003805 IPI:IPI00713038 Ensembl:ENSBTAT00000018496
Uniprot:E1B782
Length = 4847
Score = 210 (79.0 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 54/177 (30%), Positives = 87/177 (49%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
G +V IACG +SA IT G L T+G G YG+ G GS++DE P V+ L G+++ VA
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 610
Query: 359 AGLW--HTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGAR 416
G T+ ++ +G V++ P+L++ L+++ V CG++
Sbjct: 611 CGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE--KLQDLDVVKVRCGSQ 668
Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
+ + DG+V+ WG +LG G P + ++G +VA G H L L
Sbjct: 669 FSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 725
Score = 203 (76.5 bits), Expect = 5.6e-18, Sum P(3) = 5.6e-18
Identities = 53/173 (30%), Positives = 80/173 (46%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
G V +A GG HSA +T AG L T+G G YG+ G ++D+L P V +L G ++ VA
Sbjct: 4103 GTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVA 4162
Query: 359 AGLW--HTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGAR 416
G T+C++ D V++ +P +D SL + V CG++
Sbjct: 4163 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQ 4220
Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWH 468
+ + G V+ WG Y +LG G P QV ++G +A G H
Sbjct: 4221 FSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4273
Score = 184 (69.8 bits), Expect = 5.1e-15, Sum P(5) = 5.1e-15
Identities = 46/170 (27%), Positives = 81/170 (47%)
Query: 301 YVKGIAC--GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
++K +A GG+H ++ G + ++G G+ G G+ P + SL G ++ VA
Sbjct: 4051 FIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVA 4110
Query: 359 AGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGA--R 416
AG H+ C+++ GD+Y + + P+L++A L+ V+CG+
Sbjct: 4111 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA--LQGHRVVDVACGSGDA 4168
Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
T + DD V+ WG YG+LG G +P ++ ++ G V CG
Sbjct: 4169 QTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECG 4218
Score = 181 (68.8 bits), Expect = 5.8e-15, Sum P(4) = 5.8e-15
Identities = 55/203 (27%), Positives = 88/203 (43%)
Query: 274 SYGKDRSAALSRGSVNSE-GPGF--RVPGNYVKGIACGG--RHSAVITDAGALLTFGWGL 328
++GK R L + P + G+ V +ACG + +TD + ++G G
Sbjct: 4127 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGD 4186
Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXX 388
YG+ G+G +D P + SL G+ + V G ++ ++ G VY
Sbjct: 4187 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS 4246
Query: 389 DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNI 448
D PR + L+ +++ G+ H ++DG+V+ WG N GQLG G
Sbjct: 4247 DDHVRRPRQVQG--LQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQR 4304
Query: 449 PSQVT-IEGCVPRNVACGWWHTL 470
P V ++G VACG HTL
Sbjct: 4305 PRLVAALQGKKVNRVACGSAHTL 4327
Score = 168 (64.2 bits), Expect = 5.4e-13, Sum P(3) = 5.4e-13
Identities = 54/208 (25%), Positives = 92/208 (44%)
Query: 270 CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIAC--GGRHSAVITDAGALLTFGWG 327
C E++ G+ +S G+V + VK +A GGRH+ +T G + ++G G
Sbjct: 3027 CGEATNGR-LGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3085
Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXX 387
G+ G S + P + +L +I +A G H+ ++S G++Y
Sbjct: 3086 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHG 3145
Query: 388 XDQAETLPRLLDAPSLENVHSKSVSCGAR--HTAVIADDGKVFCWGWNKYGQLGLGDVID 445
+ + P+++ L V+CG+R T + D+G VF WG +G+LG G
Sbjct: 3146 DNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEG 3203
Query: 446 RNIPSQVT-IEGCVPRNVACGWWHTLLL 472
NIP + + G + CG +L L
Sbjct: 3204 CNIPQNIERLNGQGVCQIECGAQFSLAL 3231
Score = 164 (62.8 bits), Expect = 9.4e-12, Sum P(4) = 9.4e-12
Identities = 46/175 (26%), Positives = 79/175 (45%)
Query: 299 GNYVKGIACGGR--HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG 356
G+ V +ACG R + +TD G + ++G G +G+ G+G ++ P + L G +
Sbjct: 3161 GHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQ 3220
Query: 357 VAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGAR 416
+ G ++ ++ G V+ D P++++ L V+ GA
Sbjct: 3221 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG--LRGKKIVHVAVGAL 3278
Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
H + D G+V+ WG N +GQ G G P+ V +EG VACG H++
Sbjct: 3279 HCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3333
Score = 154 (59.3 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 48/202 (23%), Positives = 86/202 (42%)
Query: 274 SYGKDRSAALSRGSVNSEGPGFRVPGNYVKG-----IACGG--RHSAVITDAGALLTFGW 326
++G+ L GS E V G +KG +ACG + +T+ G + ++G
Sbjct: 575 TWGRGNYGRLGHGSSEDEAIPMLVAG--LKGLKVIDVACGSGDAQTLAVTENGQVWSWGD 632
Query: 327 GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXX 386
G YG+ G+G +D +P + L + + V G ++ ++ DG VY+
Sbjct: 633 GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGH 692
Query: 387 XXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR 446
++ P+LL+ L+ V+ G+ H + +D +V WG N Q D +
Sbjct: 693 GTEEHVRYPKLLEG--LQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRV 748
Query: 447 NIPSQVTIEGCVPRNV---ACG 465
P + G +++ ACG
Sbjct: 749 TKPEPSALPGLDTKHIVGIACG 770
Score = 138 (53.6 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 39/149 (26%), Positives = 68/149 (45%)
Query: 300 NYVKGIA-CGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ----I 354
N VK A G H + G + ++G G G+ G G T P +S+ G Q +
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 554
Query: 355 EGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCG 414
+A G ++ I+++G++Y + E +P L+ L+ + V+CG
Sbjct: 555 VHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV--AGLKGLKVIDVACG 612
Query: 415 A--RHTAVIADDGKVFCWGWNKYGQLGLG 441
+ T + ++G+V+ WG YG+LG G
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG 641
Score = 137 (53.3 bits), Expect = 1.3e-09, Sum P(5) = 1.3e-09
Identities = 45/150 (30%), Positives = 61/150 (40%)
Query: 274 SYGKDRSAALSRGSVNSEGPGF-----RVPGNYVKGIACGGRHSAVITDAGALLTFGWGL 328
S+G L RG SEG R+ G V I CG + S +T +G + T+G G
Sbjct: 3187 SWGDGDFGKLGRGG--SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3244
Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXX 388
Y + G GS P V L G +I VA G H + ++ G VYA
Sbjct: 3245 YFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT 3304
Query: 389 DQAETLPRLLDAPSLENVHSKSVSCGARHT 418
P L+ LE V+CG+ H+
Sbjct: 3305 TTVNRKPTLVQG--LEGQKITRVACGSSHS 3332
Score = 123 (48.4 bits), Expect = 4.4e-08, Sum P(3) = 4.4e-08
Identities = 45/170 (26%), Positives = 72/170 (42%)
Query: 310 RHSAVITDAGALLT--FGWGLYG--QCGQGSTDDELS-PNCVSSLLGIQIEGVAAGLWHT 364
+ +A + A + T F WGL Q G G ++ P+ +L + + VA G
Sbjct: 2957 KKAAGLESAATIRTKVFVWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVAGGSKSL 3015
Query: 365 ICISSDGDVYAXXXXXXXXXXXXXDQAET-LPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
++ +G VYA +PR + A S V +V G RH +
Sbjct: 3016 FAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV 3075
Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLL 472
DGKVF WG G+LG ++ + P + ++ R++ACG H+ L
Sbjct: 3076 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3125
Score = 117 (46.2 bits), Expect = 1.3e-07, Sum P(5) = 1.3e-07
Identities = 40/163 (24%), Positives = 81/163 (49%)
Query: 315 ITDAGALLTFGWGLY--GQCG--QGSTDDELSP-NCVSSLLGIQIEGVAAGLWHTICISS 369
++ G+ +GWG GQ G +G+ +P +++L +Q+ G L+ +++
Sbjct: 3959 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLF---AVTA 4015
Query: 370 DGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSK--SVSCGARHTAVIADDGKV 427
DG +YA ++ + P LL+ S+++V K +V+ G +H ++ +G+V
Sbjct: 4016 DGKLYATGYGAGGRLGVGGTESVSTPTLLE--SIQHVFIKKVAVNSGGKHCLALSSEGEV 4073
Query: 428 FCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
+ WG + G+LG G+ + P + ++ G +VA G H+
Sbjct: 4074 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHS 4116
Score = 111 (44.1 bits), Expect = 5.6e-18, Sum P(3) = 5.6e-18
Identities = 28/77 (36%), Positives = 38/77 (49%)
Query: 49 VCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAG 106
VC CG F++A++ S + TWG D + S H P+ IV A G
Sbjct: 3218 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVG 3276
Query: 107 WAHCVAVTEGGEVYTWG 123
HC+AVT+ G+VY WG
Sbjct: 3277 ALHCLAVTDAGQVYAWG 3293
Score = 106 (42.4 bits), Expect = 8.4e-17, Sum P(4) = 8.4e-17
Identities = 24/78 (30%), Positives = 41/78 (52%)
Query: 48 DVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAA 105
DV CG F++A++ ++ +WG D+ + T +H P+ ++ AA
Sbjct: 659 DVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 717
Query: 106 GWAHCVAVTEGGEVYTWG 123
G HC+A+TE EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735
Score = 104 (41.7 bits), Expect = 3.7e-06, Sum P(5) = 3.7e-06
Identities = 32/97 (32%), Positives = 45/97 (46%)
Query: 274 SYGKDRSAALSRGS-VNSEGP----GFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL 328
++GK L GS V+ P G R G + +A G H +TDAG + +G
Sbjct: 3239 TWGKGDYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQVYAWGDND 3296
Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTI 365
+GQ G G+T P V L G +I VA G H++
Sbjct: 3297 HGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3333
Score = 98 (39.6 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 27/80 (33%), Positives = 38/80 (47%)
Query: 48 DV-CGGGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHG-EIPEPFPLPTEASIVKA 103
DV CG G + ++D + +WG D LG+ G G ++P T +VK
Sbjct: 4160 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG----GSDGCKVPMKIDSLTGLGVVKV 4215
Query: 104 AAGWAHCVAVTEGGEVYTWG 123
G VA+T+ G VYTWG
Sbjct: 4216 ECGSQFSVALTKSGAVYTWG 4235
Score = 95 (38.5 bits), Expect = 5.4e-13, Sum P(3) = 5.4e-13
Identities = 25/80 (31%), Positives = 42/80 (52%)
Query: 48 DV-CGGGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHG-EIPEPFPLPTEASIVKA 103
DV CG G +A++++ ++ +WG D LG+ G G + P+ + +VK
Sbjct: 608 DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG----GSDGCKTPKLIEKLQDLDVVKV 663
Query: 104 AAGWAHCVAVTEGGEVYTWG 123
G VA+T+ G+VY+WG
Sbjct: 664 RCGSQFSVALTKDGQVYSWG 683
Score = 95 (38.5 bits), Expect = 1.1e-05, Sum P(4) = 1.1e-05
Identities = 24/71 (33%), Positives = 36/71 (50%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
G V IA G H ++ G + T+G GQ G G+T+ P V++L G ++ VA
Sbjct: 4261 GKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVA 4320
Query: 359 AGLWHTICISS 369
G HT+ S+
Sbjct: 4321 CGSAHTLAWST 4331
Score = 92 (37.4 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 24/77 (31%), Positives = 37/77 (48%)
Query: 49 VCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPT--EASIVKAAAG 106
V GG +A+S ++ +WG +D G+ + G P + + +V AAG
Sbjct: 4057 VNSGG-KHCLALSSEGEVYSWGEAED-GK--LGHGNRSPCDRPRVIESLRGTEVVDVAAG 4112
Query: 107 WAHCVAVTEGGEVYTWG 123
AH VT G++YTWG
Sbjct: 4113 GAHSACVTAAGDLYTWG 4129
Score = 89 (36.4 bits), Expect = 3.4e-08, Sum P(4) = 3.4e-08
Identities = 31/92 (33%), Positives = 43/92 (46%)
Query: 49 VCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWA 108
V GG A A++ K+ +WG DD G+ S + + P I A G +
Sbjct: 3063 VHSGG-RHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3120
Query: 109 HCVAVTEGGEVYTWGWKECVPSGRV-FGDLST 139
H A+T GE+YTWG E GR+ GD +T
Sbjct: 3121 HSAALTSSGELYTWGLGEY---GRLGHGDNTT 3149
Score = 78 (32.5 bits), Expect = 5.6e-07, Sum P(5) = 5.6e-07
Identities = 32/117 (27%), Positives = 50/117 (42%)
Query: 14 VFMWGYLPGALPQRS---PILSPLVVRLPLTVGSAWRDVCGGGCG--FAMAISDSRKLIT 68
V+ WG G P+ P V+ + A + V CG ++ AI+ +L T
Sbjct: 517 VYSWGCGDGGRLGHGDTVPLEEPKVISA-FSGKQAGKHVVHIACGSTYSAAITAEGELYT 575
Query: 69 WGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGW--AHCVAVTEGGEVYTWG 123
WG + G+ S + IP ++ A G A +AVTE G+V++WG
Sbjct: 576 WGR-GNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 631
Score = 76 (31.8 bits), Expect = 2.1e-14, Sum P(3) = 2.1e-14
Identities = 20/75 (26%), Positives = 33/75 (44%)
Query: 50 CGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHG-EIPEPFPLPTEASIVKAAAGWA 108
CG +A++D + +WG D G+ G G IP+ + + G
Sbjct: 3169 CGSRDAQTLALTDEGLVFSWGD-GDFGK-LGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 3226
Query: 109 HCVAVTEGGEVYTWG 123
+A+T+ G V+TWG
Sbjct: 3227 FSLALTKSGVVWTWG 3241
Score = 69 (29.3 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 18/69 (26%), Positives = 32/69 (46%)
Query: 58 MAISDSRKLITWGSTDD--LGQSYVTSGKHGEIPEPFPLPTEAS-IVKAAAGWAHCVAVT 114
+A++ + ++ +WG D LG + ++ F +V A G + A+T
Sbjct: 509 LALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT 568
Query: 115 EGGEVYTWG 123
GE+YTWG
Sbjct: 569 AEGELYTWG 577
Score = 68 (29.0 bits), Expect = 1.1e-12, Sum P(4) = 1.1e-12
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 101 VKAAAGWAHCVAVTEGGEVYTWGWKE 126
V +G HC+A++ GEVY+WG E
Sbjct: 4055 VAVNSGGKHCLALSSEGEVYSWGEAE 4080
Score = 67 (28.6 bits), Expect = 4.6e-06, Sum P(4) = 4.6e-06
Identities = 25/87 (28%), Positives = 39/87 (44%)
Query: 55 GFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVT 114
G A + K+ WG +D Q G ++P + ++V+ A G AVT
Sbjct: 2961 GLESAATIRTKVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT 3019
Query: 115 EGGEVYTWGWKECVPSGRVFGDLSTGT 141
G+VY G E +GR+ +S+GT
Sbjct: 3020 VEGKVYACG--EAT-NGRLGLGISSGT 3043
Score = 62 (26.9 bits), Expect = 1.4e-05, Sum P(4) = 1.4e-05
Identities = 23/78 (29%), Positives = 37/78 (47%)
Query: 52 GGCGFAMAISDSRKLITWGSTDD--LGQSYVTSGKHGEIPEPFPLPTEAS-IVKAAA--- 105
GG A++ K+ G + LG ++SG +P P + +S +VK A
Sbjct: 3010 GGSKSLFAVTVEGKVYACGEATNGRLGLG-ISSGT---VPIPRQITALSSYVVKKVAVHS 3065
Query: 106 GWAHCVAVTEGGEVYTWG 123
G H A+T G+V++WG
Sbjct: 3066 GGRHATALTVDGKVFSWG 3083
Score = 60 (26.2 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 18/41 (43%), Positives = 23/41 (56%)
Query: 99 SIVKAAA--GWAHCVAVTEGGEVYTWGWKECVPSGRV-FGD 136
+IVK AA H +A+ GEVY+WG C GR+ GD
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWG---CGDGGRLGHGD 532
Score = 53 (23.7 bits), Expect = 5.4e-13, Sum P(3) = 5.4e-13
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSD 238
G E +P L+ G ++ VAAG H LAL++
Sbjct: 693 GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727
Score = 52 (23.4 bits), Expect = 5.1e-15, Sum P(5) = 5.1e-15
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGR--HTLALSD 238
GD P +V + G R+ VA G R TLAL+D
Sbjct: 3145 GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3181
Score = 50 (22.7 bits), Expect = 0.00024, Sum P(5) = 0.00024
Identities = 21/67 (31%), Positives = 29/67 (43%)
Query: 48 DVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLP--TEASIVKAAA 105
DV G +A+++ ++ +WGS D Q + T PEP LP IV A
Sbjct: 714 DVAAGST-HCLALTEDSEVHSWGSNDQC-QHFDTL--RVTKPEPSALPGLDTKHIVGIAC 769
Query: 106 GWAHCVA 112
G A A
Sbjct: 770 GPAQSFA 776
Score = 47 (21.6 bits), Expect = 5.6e-18, Sum P(3) = 5.6e-18
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALS 237
G E++S P L+ V I VA +GG+H LALS
Sbjct: 4034 GTESVST-PTLLESIQHVFIKKVAVNSGGKHCLALS 4068
Score = 47 (21.6 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
Identities = 16/62 (25%), Positives = 27/62 (43%)
Query: 53 GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
G +A++D+ ++ WG D Q T+ + + P I + A G +H VA
Sbjct: 3276 GALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRK-PTLVQGLEGQKITRVACGSSHSVA 3334
Query: 113 VT 114
T
Sbjct: 3335 WT 3336
Score = 47 (21.6 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
Identities = 16/69 (23%), Positives = 27/69 (39%)
Query: 56 FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTE 115
+ ++ S + WG + GQ G ++P P V+ G AVT
Sbjct: 3957 WTLSAGGSGTIYGWGH-NHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTA 4015
Query: 116 GGEVYTWGW 124
G++Y G+
Sbjct: 4016 DGKLYATGY 4024
Score = 45 (20.9 bits), Expect = 8.4e-17, Sum P(4) = 8.4e-17
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 198 AESSSSGDENLSAF--PCLVTLNPGVRIATVAAGGRHTLALS 237
AE G N S P ++ G + VAAGG H+ ++
Sbjct: 4079 AEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVT 4120
Score = 43 (20.2 bits), Expect = 1.3e-16, Sum P(4) = 1.3e-16
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 220 GVRIATVAAGGRHTLALSD 238
G +I VA G H LA++D
Sbjct: 3267 GKKIVHVAVGALHCLAVTD 3285
Score = 43 (20.2 bits), Expect = 2.2e-05, Sum P(4) = 2.2e-05
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 202 SSGDENLSAFPCLVTLNPGVRIATVAAGG--RHTLALSD 238
SS DE A P LV G+++ VA G TLA+++
Sbjct: 588 SSEDE---AIPMLVAGLKGLKVIDVACGSGDAQTLAVTE 623
Score = 40 (19.1 bits), Expect = 8.4e-17, Sum P(4) = 8.4e-17
Identities = 10/35 (28%), Positives = 15/35 (42%)
Query: 123 GWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTE 157
GW+ +P G G+ T D D+ + L E
Sbjct: 1701 GWQRLIPEGIDIGEPLTDCLKDVDLIPPFNRMLLE 1735
Score = 39 (18.8 bits), Expect = 5.1e-15, Sum P(5) = 5.1e-15
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 299 GNYVKGIACGGRHSAVIT 316
G + +ACG HS T
Sbjct: 3319 GQKITRVACGSSHSVAWT 3336
Score = 39 (18.8 bits), Expect = 9.4e-12, Sum P(4) = 9.4e-12
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 221 VRIATVAAGGRHTLALS 237
V+ V +GGRH AL+
Sbjct: 3058 VKKVAVHSGGRHATALT 3074
Score = 38 (18.4 bits), Expect = 1.3e-09, Sum P(5) = 1.3e-09
Identities = 6/9 (66%), Positives = 6/9 (66%)
Query: 424 DGKVFCWGW 432
DG V WGW
Sbjct: 3707 DGSVNGWGW 3715
Score = 37 (18.1 bits), Expect = 1.1e-12, Sum P(4) = 1.1e-12
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 68 TWGSTDDLGQSYVTSGKHGE 87
T+G ++ GQS + G+ G+
Sbjct: 2757 TFGRINEPGQSAIFCGRSGK 2776
>MGI|MGI:1917200 [details] [associations]
symbol:Rcbtb2 "regulator of chromosome condensation (RCC1)
and BTB (POZ) domain containing protein 2" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651
PROSITE:PS50097 SMART:SM00225 MGI:MGI:1917200 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104208 HOGENOM:HOG000065752
HOVERGEN:HBG053261 KO:K11494 CTD:1102 OrthoDB:EOG4M91R6
ChiTaRS:RCBTB2 EMBL:AK031242 EMBL:AK031248 EMBL:AK160881
EMBL:BC003224 IPI:IPI00308981 IPI:IPI00661148 RefSeq:NP_001164165.1
RefSeq:NP_598844.3 UniGene:Mm.280068 ProteinModelPortal:Q99LJ7
SMR:Q99LJ7 STRING:Q99LJ7 PhosphoSite:Q99LJ7 PaxDb:Q99LJ7
PRIDE:Q99LJ7 Ensembl:ENSMUST00000022702 Ensembl:ENSMUST00000110952
Ensembl:ENSMUST00000164822 Ensembl:ENSMUST00000169479
Ensembl:ENSMUST00000169513 Ensembl:ENSMUST00000170677 GeneID:105670
KEGG:mmu:105670 UCSC:uc007upj.2 UCSC:uc007upm.2 InParanoid:Q99LJ7
OMA:QMCSMAV NextBio:357822 Bgee:Q99LJ7 Genevestigator:Q99LJ7
GermOnline:ENSMUSG00000022106 Uniprot:Q99LJ7
Length = 551
Score = 244 (91.0 bits), Expect = 5.6e-18, P = 5.6e-18
Identities = 62/203 (30%), Positives = 103/203 (50%)
Query: 276 GKDRSAALSRGSVNSEGPGFRVP---GNYVKGIACG-GRHSAVITDAGALLTFGWGLYGQ 331
G + S L G + S R+ G + ++ G G H + T G + T+G Y Q
Sbjct: 71 GTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQ 130
Query: 332 CGQGSTDDELSPNCVSS-LLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQ 390
G G+T+ L P +S+ L Q+ VA G +H++ ++SDG+V+A
Sbjct: 131 LGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTA 190
Query: 391 AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
+ +PR + L+N +++CG + + D G+V+ WG+N GQLGLG ++ P
Sbjct: 191 NQPIPRRVTG-CLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPC 249
Query: 451 QVT-IEGCVPRNVACGWWHTLLL 472
+V ++G + VACG+ HTL+L
Sbjct: 250 RVAALQGIRVQRVACGYAHTLVL 272
Score = 223 (83.6 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 71/289 (24%), Positives = 121/289 (41%)
Query: 191 ISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIXXXXXXXXXXX 250
+ L +Q S+G+E L T+N + + G L + DI
Sbjct: 42 LQLIRQACVFGSAGNEVL-----YTTVNDEIFVLGTNCSG--CLGVGDIQSTIEPRRLDS 94
Query: 251 XXXXXXSRIRMVSSPHPIPCIES----SYGKDRSAALSRGSVNSEGPGFRVPGNY----V 302
+ + S PH + ++G + + L G+ N + N V
Sbjct: 95 LTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQV 154
Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE-GVAAGL 361
+ACG HS V+T G + +G+ GQ G GST ++ P V+ L ++ +A G
Sbjct: 155 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQ 214
Query: 362 WHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
++ + G+VY + P + A L+ + + V+CG HT V+
Sbjct: 215 MCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAA--LQGIRVQRVACGYAHTLVL 272
Query: 422 ADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE-GCVPRNVACGWWHT 469
D+G+++ WG N YGQLG G+ +++ P+ V +E + AC HT
Sbjct: 273 TDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHT 321
Score = 162 (62.1 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
Identities = 44/165 (26%), Positives = 78/165 (47%)
Query: 274 SYGKDRSAALSRGSVNSEGPGFRVPG----NYVKGIACGGRHSAVITDAGALLTFGWGLY 329
++G + S + GS ++ RV G V IACG S + D G + +G+
Sbjct: 175 AWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGN 234
Query: 330 GQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYA--XXXXXXXXXXXX 387
GQ G GS+ ++ +P V++L GI+++ VA G HT+ ++ +G +YA
Sbjct: 235 GQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNK 294
Query: 388 XDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
+Q+ P +++ + + +C + HT A G V+ WG
Sbjct: 295 SNQSYPTPVVVEKDRIIEI----AACHSAHTSAAKTQGGHVYMWG 335
Score = 86 (35.3 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
Identities = 27/92 (29%), Positives = 42/92 (45%)
Query: 51 GGGCGFAMAISDSRKLITWGST--DDLGQSYVTSGKHGEIPEPFPLP-TEASIVKAAAGW 107
G G +A +D ++ TWG LG + HG +P + +++ A G
Sbjct: 106 GSGPHIVLATTDG-EVFTWGHNAYSQLGNG---TTNHGLVPCHISTNLSNKQVIEVACGS 161
Query: 108 AHCVAVTEGGEVYTWGWKECVPSGRVFGDLST 139
H + +T GEV+ WG+ SG+V G ST
Sbjct: 162 YHSLVLTSDGEVFAWGYNN---SGQV-GSGST 189
>RGD|1307989 [details] [associations]
symbol:Herc2 "HECT and RLD domain containing E3 ubiquitin
protein ligase 2" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IBA] [GO:0005634
"nucleus" evidence=ISO;IBA] [GO:0005737 "cytoplasm"
evidence=ISO;IBA] [GO:0005743 "mitochondrial inner membrane"
evidence=ISO] [GO:0006281 "DNA repair" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=ISO] [GO:0007283
"spermatogenesis" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0020037 "heme binding" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=ISO] [GO:0032183 "SUMO binding"
evidence=ISO] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0020037
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
GO:GO:0042787 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 InterPro:IPR006624
SMART:SM00706 IPI:IPI00476523 Ensembl:ENSRNOT00000019318
UCSC:RGD:1307989 ArrayExpress:F1M716 Uniprot:F1M716
Length = 3607
Score = 198 (74.8 bits), Expect = 6.7e-18, Sum P(3) = 6.7e-18
Identities = 52/173 (30%), Positives = 80/173 (46%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
G V +A GG HSA +T AG L T+G G YG+ G ++D+L P V +L G ++ +A
Sbjct: 2864 GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIA 2923
Query: 359 AGLW--HTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGAR 416
G T+C++ D V++ +P +D SL + V CG++
Sbjct: 2924 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQ 2981
Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWH 468
+ + G V+ WG Y +LG G P QV ++G +A G H
Sbjct: 2982 FSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 3034
Score = 187 (70.9 bits), Expect = 1.5e-16, Sum P(3) = 1.5e-16
Identities = 46/170 (27%), Positives = 82/170 (48%)
Query: 301 YVKGIAC--GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
++K +A GG+H ++ G + ++G G+ G G+ P + SL GI++ VA
Sbjct: 2812 FIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVA 2871
Query: 359 AGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGA--R 416
AG H+ C+++ GD+Y + + P+L++A L+ ++CG+
Sbjct: 2872 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA--LQGHRVIDIACGSGDA 2929
Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
T + DD V+ WG YG+LG G +P ++ ++ G V CG
Sbjct: 2930 QTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECG 2979
Score = 180 (68.4 bits), Expect = 7.5e-16, Sum P(3) = 7.5e-16
Identities = 56/203 (27%), Positives = 87/203 (42%)
Query: 274 SYGKDRSAALSRGSVNSE-GPGF--RVPGNYVKGIACGG--RHSAVITDAGALLTFGWGL 328
++GK R L + P + G+ V IACG + +TD + ++G G
Sbjct: 2888 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 2947
Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXX 388
YG+ G+G +D P + SL G+ + V G ++ ++ G VY
Sbjct: 2948 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS 3007
Query: 389 DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNI 448
D PR + L+ +++ G+ H +DG+V+ WG N GQLG G
Sbjct: 3008 DDHVRRPRQVQG--LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR 3065
Query: 449 PSQVT-IEGCVPRNVACGWWHTL 470
P V ++G VACG HTL
Sbjct: 3066 PRLVAALQGKKVNRVACGSAHTL 3088
Score = 168 (64.2 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 54/208 (25%), Positives = 92/208 (44%)
Query: 270 CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIAC--GGRHSAVITDAGALLTFGWG 327
C E++ G+ +S G+V + VK +A GGRH+ +T G + ++G G
Sbjct: 1825 CGEATNGR-LGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 1883
Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXX 387
G+ G S + P + +L +I +A G H+ ++S G++Y
Sbjct: 1884 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHG 1943
Query: 388 XDQAETLPRLLDAPSLENVHSKSVSCGAR--HTAVIADDGKVFCWGWNKYGQLGLGDVID 445
+ + P+++ L V+CG+R T + D+G VF WG +G+LG G
Sbjct: 1944 DNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEG 2001
Query: 446 RNIPSQVT-IEGCVPRNVACGWWHTLLL 472
NIP + + G + CG +L L
Sbjct: 2002 CNIPQNIERLNGQGVCQIECGAQFSLAL 2029
Score = 166 (63.5 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12
Identities = 46/175 (26%), Positives = 79/175 (45%)
Query: 299 GNYVKGIACGGR--HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG 356
G+ V +ACG R + +TD G + ++G G +G+ G+G ++ P + L G +
Sbjct: 1959 GHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQ 2018
Query: 357 VAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGAR 416
+ G ++ ++ G V+ D P++++ L V+ GA
Sbjct: 2019 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG--LRGKKIVHVAVGAL 2076
Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
H + D G+V+ WG N +GQ G G P+ V +EG VACG H++
Sbjct: 2077 HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 2131
Score = 139 (54.0 bits), Expect = 6.5e-09, Sum P(4) = 6.5e-09
Identities = 45/150 (30%), Positives = 61/150 (40%)
Query: 274 SYGKDRSAALSRGSVNSEGPGF-----RVPGNYVKGIACGGRHSAVITDAGALLTFGWGL 328
S+G L RG SEG R+ G V I CG + S +T +G + T+G G
Sbjct: 1985 SWGDGDFGKLGRGG--SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 2042
Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXX 388
Y + G GS P V L G +I VA G H + ++ G VYA
Sbjct: 2043 YFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 2102
Query: 389 DQAETLPRLLDAPSLENVHSKSVSCGARHT 418
P L+ LE V+CG+ H+
Sbjct: 2103 TTVNRKPTLVQG--LEGQKITRVACGSSHS 2130
Score = 117 (46.2 bits), Expect = 5.1e-08, Sum P(3) = 5.1e-08
Identities = 40/163 (24%), Positives = 81/163 (49%)
Query: 315 ITDAGALLTFGWGLY--GQCG--QGSTDDELSP-NCVSSLLGIQIEGVAAGLWHTICISS 369
++ G+ +GWG GQ G +G+ +P +++L +Q+ G L+ +++
Sbjct: 2720 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLF---AVTA 2776
Query: 370 DGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSK--SVSCGARHTAVIADDGKV 427
DG +YA ++ + P LL+ S+++V K +V+ G +H ++ +G+V
Sbjct: 2777 DGKLYATGYGAGGRLGIGGTESVSTPTLLE--SIQHVFIKKVAVNSGGKHCLALSSEGEV 2834
Query: 428 FCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
+ WG + G+LG G+ + P + ++ G +VA G H+
Sbjct: 2835 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 2877
Score = 111 (44.1 bits), Expect = 6.7e-18, Sum P(3) = 6.7e-18
Identities = 28/77 (36%), Positives = 38/77 (49%)
Query: 49 VCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAG 106
VC CG F++A++ S + TWG D + S H P+ IV A G
Sbjct: 2016 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVG 2074
Query: 107 WAHCVAVTEGGEVYTWG 123
HC+AVT+ G+VY WG
Sbjct: 2075 ALHCLAVTDSGQVYAWG 2091
Score = 101 (40.6 bits), Expect = 7.1e-05, Sum P(4) = 7.1e-05
Identities = 31/97 (31%), Positives = 45/97 (46%)
Query: 274 SYGKDRSAALSRGS-VNSEGP----GFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL 328
++GK L GS V+ P G R G + +A G H +TD+G + +G
Sbjct: 2037 TWGKGDYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDND 2094
Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTI 365
+GQ G G+T P V L G +I VA G H++
Sbjct: 2095 HGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 2131
Score = 99 (39.9 bits), Expect = 4.4e-07, Sum P(3) = 4.4e-07
Identities = 25/71 (35%), Positives = 36/71 (50%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
G V IA G H T+ G + T+G GQ G G+T+ P V++L G ++ VA
Sbjct: 3022 GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVA 3081
Query: 359 AGLWHTICISS 369
G HT+ S+
Sbjct: 3082 CGSAHTLAWST 3092
Score = 97 (39.2 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 25/77 (32%), Positives = 36/77 (46%)
Query: 50 CGGGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHG-EIPEPFPLPTEASIVKAAAG 106
CG G + ++D + +WG D LG+ G G ++P T +VK G
Sbjct: 2924 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG----GSDGCKVPMKIDSLTGLGVVKVECG 2979
Query: 107 WAHCVAVTEGGEVYTWG 123
VA+T+ G VYTWG
Sbjct: 2980 SQFSVALTKSGAVYTWG 2996
Score = 91 (37.1 bits), Expect = 9.8e-14, Sum P(2) = 9.8e-14
Identities = 25/77 (32%), Positives = 37/77 (48%)
Query: 49 VCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASI--VKAAAG 106
V GG +A+S ++ +WG +D G+ + G P + + I V AAG
Sbjct: 2818 VNSGG-KHCLALSSEGEVYSWGEAED-GK--LGHGNRSPCDRPRVIESLRGIEVVDVAAG 2873
Query: 107 WAHCVAVTEGGEVYTWG 123
AH VT G++YTWG
Sbjct: 2874 GAHSACVTAAGDLYTWG 2890
Score = 89 (36.4 bits), Expect = 3.9e-15, Sum P(3) = 3.9e-15
Identities = 31/92 (33%), Positives = 43/92 (46%)
Query: 49 VCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWA 108
V GG A A++ K+ +WG DD G+ S + + P I A G +
Sbjct: 1861 VHSGG-RHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSS 1918
Query: 109 HCVAVTEGGEVYTWGWKECVPSGRV-FGDLST 139
H A+T GE+YTWG E GR+ GD +T
Sbjct: 1919 HSAALTSSGELYTWGLGEY---GRLGHGDNTT 1947
Score = 76 (31.8 bits), Expect = 2.5e-14, Sum P(3) = 2.5e-14
Identities = 20/75 (26%), Positives = 33/75 (44%)
Query: 50 CGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHG-EIPEPFPLPTEASIVKAAAGWA 108
CG +A++D + +WG D G+ G G IP+ + + G
Sbjct: 1967 CGSRDAQTLALTDEGLVFSWGD-GDFGK-LGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 2024
Query: 109 HCVAVTEGGEVYTWG 123
+A+T+ G V+TWG
Sbjct: 2025 FSLALTKSGVVWTWG 2039
Score = 68 (29.0 bits), Expect = 5.0e-13, Sum P(4) = 5.0e-13
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 101 VKAAAGWAHCVAVTEGGEVYTWGWKE 126
V +G HC+A++ GEVY+WG E
Sbjct: 2816 VAVNSGGKHCLALSSEGEVYSWGEAE 2841
Score = 65 (27.9 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 23/77 (29%), Positives = 37/77 (48%)
Query: 65 KLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGW 124
K+ WG +D Q G ++P + ++V+ A G AVT G+VY+ G
Sbjct: 1769 KVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCG- 1826
Query: 125 KECVPSGRVFGDLSTGT 141
E +GR+ +S+GT
Sbjct: 1827 -EAT-NGRLGLGMSSGT 1841
Score = 62 (26.9 bits), Expect = 2.8e-06, Sum P(4) = 2.8e-06
Identities = 21/76 (27%), Positives = 36/76 (47%)
Query: 52 GGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEAS-IVKAAA---GW 107
GG A++ K+ + G + G+ + G +P P + +S +VK A G
Sbjct: 1808 GGSKSLFAVTVEGKVYSCGEATN-GRLGLGMSS-GTVPIPRQITALSSYVVKKVAVHSGG 1865
Query: 108 AHCVAVTEGGEVYTWG 123
H A+T G+V++WG
Sbjct: 1866 RHATALTVDGKVFSWG 1881
Score = 52 (23.4 bits), Expect = 6.5e-09, Sum P(4) = 6.5e-09
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGR--HTLALSD 238
GD P +V + G R+ VA G R TLAL+D
Sbjct: 1943 GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 1979
Score = 50 (22.7 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 17/62 (27%), Positives = 27/62 (43%)
Query: 53 GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
G +A++DS ++ WG D Q T+ + + P I + A G +H VA
Sbjct: 2074 GALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK-PTLVQGLEGQKITRVACGSSHSVA 2132
Query: 113 VT 114
T
Sbjct: 2133 WT 2134
Score = 48 (22.0 bits), Expect = 6.7e-18, Sum P(3) = 6.7e-18
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 198 AESSSSGDENLSAF--PCLVTLNPGVRIATVAAGGRHTLALS 237
AE G N S P ++ G+ + VAAGG H+ ++
Sbjct: 2840 AEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT 2881
Score = 47 (21.6 bits), Expect = 8.5e-18, Sum P(3) = 8.5e-18
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALS 237
G E++S P L+ V I VA +GG+H LALS
Sbjct: 2795 GTESVST-PTLLESIQHVFIKKVAVNSGGKHCLALS 2829
Score = 47 (21.6 bits), Expect = 2.2e-11, Sum P(3) = 2.2e-11
Identities = 16/69 (23%), Positives = 27/69 (39%)
Query: 56 FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTE 115
+ ++ S + WG + GQ G ++P P V+ G AVT
Sbjct: 2718 WTLSAGGSGTIYGWGH-NHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTA 2776
Query: 116 GGEVYTWGW 124
G++Y G+
Sbjct: 2777 DGKLYATGY 2785
Score = 43 (20.2 bits), Expect = 3.9e-15, Sum P(3) = 3.9e-15
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 220 GVRIATVAAGGRHTLALSD 238
G +I VA G H LA++D
Sbjct: 2065 GKKIVHVAVGALHCLAVTD 2083
Score = 40 (19.1 bits), Expect = 0.00035, Sum P(4) = 0.00035
Identities = 10/35 (28%), Positives = 15/35 (42%)
Query: 123 GWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTE 157
GW+ +P G G+ T D D+ + L E
Sbjct: 504 GWQRLIPEGIDIGEPLTDCLRDVDLIPPFNRMLLE 538
Score = 39 (18.8 bits), Expect = 1.0e-15, Sum P(3) = 1.0e-15
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 299 GNYVKGIACGGRHSAVIT 316
G + +ACG HS T
Sbjct: 2117 GQKITRVACGSSHSVAWT 2134
Score = 39 (18.8 bits), Expect = 2.5e-05, Sum P(4) = 2.5e-05
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 221 VRIATVAAGGRHTLALS 237
V+ V +GGRH AL+
Sbjct: 1856 VKKVAVHSGGRHATALT 1872
Score = 38 (18.4 bits), Expect = 5.0e-13, Sum P(4) = 5.0e-13
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 68 TWGSTDDLGQSYVTSGKHGE 87
T+G ++ GQS V G+ G+
Sbjct: 1555 TFGRINEPGQSAVFCGRSGK 1574
Score = 38 (18.4 bits), Expect = 6.5e-09, Sum P(4) = 6.5e-09
Identities = 6/9 (66%), Positives = 6/9 (66%)
Query: 424 DGKVFCWGW 432
DG V WGW
Sbjct: 2468 DGSVNGWGW 2476
>UNIPROTKB|F1M560 [details] [associations]
symbol:Herc2 "Protein Herc2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0046872
GO:GO:0008270 GO:GO:0020037 GO:GO:0005622 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.10.120.10
SUPFAM:SSF55856 InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
Pfam:PF03256 PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 InterPro:IPR006624
SMART:SM00706 IPI:IPI00779702 Ensembl:ENSRNOT00000055965
ArrayExpress:F1M560 Uniprot:F1M560
Length = 3643
Score = 198 (74.8 bits), Expect = 6.9e-18, Sum P(3) = 6.9e-18
Identities = 52/173 (30%), Positives = 80/173 (46%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
G V +A GG HSA +T AG L T+G G YG+ G ++D+L P V +L G ++ +A
Sbjct: 2900 GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIA 2959
Query: 359 AGLW--HTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGAR 416
G T+C++ D V++ +P +D SL + V CG++
Sbjct: 2960 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQ 3017
Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWH 468
+ + G V+ WG Y +LG G P QV ++G +A G H
Sbjct: 3018 FSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 3070
Score = 187 (70.9 bits), Expect = 1.6e-16, Sum P(3) = 1.6e-16
Identities = 46/170 (27%), Positives = 82/170 (48%)
Query: 301 YVKGIAC--GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
++K +A GG+H ++ G + ++G G+ G G+ P + SL GI++ VA
Sbjct: 2848 FIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVA 2907
Query: 359 AGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGA--R 416
AG H+ C+++ GD+Y + + P+L++A L+ ++CG+
Sbjct: 2908 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA--LQGHRVIDIACGSGDA 2965
Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
T + DD V+ WG YG+LG G +P ++ ++ G V CG
Sbjct: 2966 QTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECG 3015
Score = 180 (68.4 bits), Expect = 7.8e-16, Sum P(3) = 7.8e-16
Identities = 56/203 (27%), Positives = 87/203 (42%)
Query: 274 SYGKDRSAALSRGSVNSE-GPGF--RVPGNYVKGIACGG--RHSAVITDAGALLTFGWGL 328
++GK R L + P + G+ V IACG + +TD + ++G G
Sbjct: 2924 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 2983
Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXX 388
YG+ G+G +D P + SL G+ + V G ++ ++ G VY
Sbjct: 2984 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS 3043
Query: 389 DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNI 448
D PR + L+ +++ G+ H +DG+V+ WG N GQLG G
Sbjct: 3044 DDHVRRPRQVQG--LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR 3101
Query: 449 PSQVT-IEGCVPRNVACGWWHTL 470
P V ++G VACG HTL
Sbjct: 3102 PRLVAALQGKKVNRVACGSAHTL 3124
Score = 168 (64.2 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 54/208 (25%), Positives = 92/208 (44%)
Query: 270 CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIAC--GGRHSAVITDAGALLTFGWG 327
C E++ G+ +S G+V + VK +A GGRH+ +T G + ++G G
Sbjct: 1825 CGEATNGR-LGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 1883
Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXX 387
G+ G S + P + +L +I +A G H+ ++S G++Y
Sbjct: 1884 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHG 1943
Query: 388 XDQAETLPRLLDAPSLENVHSKSVSCGAR--HTAVIADDGKVFCWGWNKYGQLGLGDVID 445
+ + P+++ L V+CG+R T + D+G VF WG +G+LG G
Sbjct: 1944 DNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEG 2001
Query: 446 RNIPSQVT-IEGCVPRNVACGWWHTLLL 472
NIP + + G + CG +L L
Sbjct: 2002 CNIPQNIERLNGQGVCQIECGAQFSLAL 2029
Score = 166 (63.5 bits), Expect = 5.6e-12, Sum P(2) = 5.6e-12
Identities = 46/175 (26%), Positives = 79/175 (45%)
Query: 299 GNYVKGIACGGR--HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG 356
G+ V +ACG R + +TD G + ++G G +G+ G+G ++ P + L G +
Sbjct: 1959 GHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQ 2018
Query: 357 VAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGAR 416
+ G ++ ++ G V+ D P++++ L V+ GA
Sbjct: 2019 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG--LRGKKIVHVAVGAL 2076
Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
H + D G+V+ WG N +GQ G G P+ V +EG VACG H++
Sbjct: 2077 HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 2131
Score = 139 (54.0 bits), Expect = 6.7e-09, Sum P(4) = 6.7e-09
Identities = 45/150 (30%), Positives = 61/150 (40%)
Query: 274 SYGKDRSAALSRGSVNSEGPGF-----RVPGNYVKGIACGGRHSAVITDAGALLTFGWGL 328
S+G L RG SEG R+ G V I CG + S +T +G + T+G G
Sbjct: 1985 SWGDGDFGKLGRGG--SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 2042
Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXX 388
Y + G GS P V L G +I VA G H + ++ G VYA
Sbjct: 2043 YFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 2102
Query: 389 DQAETLPRLLDAPSLENVHSKSVSCGARHT 418
P L+ LE V+CG+ H+
Sbjct: 2103 TTVNRKPTLVQG--LEGQKITRVACGSSHS 2130
Score = 117 (46.2 bits), Expect = 5.2e-08, Sum P(3) = 5.2e-08
Identities = 40/163 (24%), Positives = 81/163 (49%)
Query: 315 ITDAGALLTFGWGLY--GQCG--QGSTDDELSP-NCVSSLLGIQIEGVAAGLWHTICISS 369
++ G+ +GWG GQ G +G+ +P +++L +Q+ G L+ +++
Sbjct: 2756 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLF---AVTA 2812
Query: 370 DGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSK--SVSCGARHTAVIADDGKV 427
DG +YA ++ + P LL+ S+++V K +V+ G +H ++ +G+V
Sbjct: 2813 DGKLYATGYGAGGRLGIGGTESVSTPTLLE--SIQHVFIKKVAVNSGGKHCLALSSEGEV 2870
Query: 428 FCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
+ WG + G+LG G+ + P + ++ G +VA G H+
Sbjct: 2871 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 2913
Score = 111 (44.1 bits), Expect = 6.9e-18, Sum P(3) = 6.9e-18
Identities = 28/77 (36%), Positives = 38/77 (49%)
Query: 49 VCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAG 106
VC CG F++A++ S + TWG D + S H P+ IV A G
Sbjct: 2016 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVG 2074
Query: 107 WAHCVAVTEGGEVYTWG 123
HC+AVT+ G+VY WG
Sbjct: 2075 ALHCLAVTDSGQVYAWG 2091
Score = 101 (40.6 bits), Expect = 7.4e-05, Sum P(4) = 7.4e-05
Identities = 31/97 (31%), Positives = 45/97 (46%)
Query: 274 SYGKDRSAALSRGS-VNSEGP----GFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL 328
++GK L GS V+ P G R G + +A G H +TD+G + +G
Sbjct: 2037 TWGKGDYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDND 2094
Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTI 365
+GQ G G+T P V L G +I VA G H++
Sbjct: 2095 HGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 2131
Score = 99 (39.9 bits), Expect = 4.6e-07, Sum P(3) = 4.6e-07
Identities = 25/71 (35%), Positives = 36/71 (50%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
G V IA G H T+ G + T+G GQ G G+T+ P V++L G ++ VA
Sbjct: 3058 GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVA 3117
Query: 359 AGLWHTICISS 369
G HT+ S+
Sbjct: 3118 CGSAHTLAWST 3128
Score = 97 (39.2 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 25/77 (32%), Positives = 36/77 (46%)
Query: 50 CGGGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHG-EIPEPFPLPTEASIVKAAAG 106
CG G + ++D + +WG D LG+ G G ++P T +VK G
Sbjct: 2960 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG----GSDGCKVPMKIDSLTGLGVVKVECG 3015
Query: 107 WAHCVAVTEGGEVYTWG 123
VA+T+ G VYTWG
Sbjct: 3016 SQFSVALTKSGAVYTWG 3032
Score = 91 (37.1 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 25/77 (32%), Positives = 37/77 (48%)
Query: 49 VCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASI--VKAAAG 106
V GG +A+S ++ +WG +D G+ + G P + + I V AAG
Sbjct: 2854 VNSGG-KHCLALSSEGEVYSWGEAED-GK--LGHGNRSPCDRPRVIESLRGIEVVDVAAG 2909
Query: 107 WAHCVAVTEGGEVYTWG 123
AH VT G++YTWG
Sbjct: 2910 GAHSACVTAAGDLYTWG 2926
Score = 89 (36.4 bits), Expect = 4.0e-15, Sum P(3) = 4.0e-15
Identities = 31/92 (33%), Positives = 43/92 (46%)
Query: 49 VCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWA 108
V GG A A++ K+ +WG DD G+ S + + P I A G +
Sbjct: 1861 VHSGG-RHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSS 1918
Query: 109 HCVAVTEGGEVYTWGWKECVPSGRV-FGDLST 139
H A+T GE+YTWG E GR+ GD +T
Sbjct: 1919 HSAALTSSGELYTWGLGEY---GRLGHGDNTT 1947
Score = 76 (31.8 bits), Expect = 2.6e-14, Sum P(3) = 2.6e-14
Identities = 20/75 (26%), Positives = 33/75 (44%)
Query: 50 CGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHG-EIPEPFPLPTEASIVKAAAGWA 108
CG +A++D + +WG D G+ G G IP+ + + G
Sbjct: 1967 CGSRDAQTLALTDEGLVFSWGD-GDFGK-LGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 2024
Query: 109 HCVAVTEGGEVYTWG 123
+A+T+ G V+TWG
Sbjct: 2025 FSLALTKSGVVWTWG 2039
Score = 68 (29.0 bits), Expect = 5.2e-13, Sum P(4) = 5.2e-13
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 101 VKAAAGWAHCVAVTEGGEVYTWGWKE 126
V +G HC+A++ GEVY+WG E
Sbjct: 2852 VAVNSGGKHCLALSSEGEVYSWGEAE 2877
Score = 65 (27.9 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 23/77 (29%), Positives = 37/77 (48%)
Query: 65 KLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGW 124
K+ WG +D Q G ++P + ++V+ A G AVT G+VY+ G
Sbjct: 1769 KVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCG- 1826
Query: 125 KECVPSGRVFGDLSTGT 141
E +GR+ +S+GT
Sbjct: 1827 -EAT-NGRLGLGMSSGT 1841
Score = 62 (26.9 bits), Expect = 2.9e-06, Sum P(4) = 2.9e-06
Identities = 21/76 (27%), Positives = 36/76 (47%)
Query: 52 GGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEAS-IVKAAA---GW 107
GG A++ K+ + G + G+ + G +P P + +S +VK A G
Sbjct: 1808 GGSKSLFAVTVEGKVYSCGEATN-GRLGLGMSS-GTVPIPRQITALSSYVVKKVAVHSGG 1865
Query: 108 AHCVAVTEGGEVYTWG 123
H A+T G+V++WG
Sbjct: 1866 RHATALTVDGKVFSWG 1881
Score = 52 (23.4 bits), Expect = 6.7e-09, Sum P(4) = 6.7e-09
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGR--HTLALSD 238
GD P +V + G R+ VA G R TLAL+D
Sbjct: 1943 GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 1979
Score = 50 (22.7 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 17/62 (27%), Positives = 27/62 (43%)
Query: 53 GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
G +A++DS ++ WG D Q T+ + + P I + A G +H VA
Sbjct: 2074 GALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK-PTLVQGLEGQKITRVACGSSHSVA 2132
Query: 113 VT 114
T
Sbjct: 2133 WT 2134
Score = 48 (22.0 bits), Expect = 6.9e-18, Sum P(3) = 6.9e-18
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 198 AESSSSGDENLSAF--PCLVTLNPGVRIATVAAGGRHTLALS 237
AE G N S P ++ G+ + VAAGG H+ ++
Sbjct: 2876 AEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT 2917
Score = 47 (21.6 bits), Expect = 8.8e-18, Sum P(3) = 8.8e-18
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALS 237
G E++S P L+ V I VA +GG+H LALS
Sbjct: 2831 GTESVST-PTLLESIQHVFIKKVAVNSGGKHCLALS 2865
Score = 47 (21.6 bits), Expect = 2.3e-11, Sum P(3) = 2.3e-11
Identities = 16/69 (23%), Positives = 27/69 (39%)
Query: 56 FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTE 115
+ ++ S + WG + GQ G ++P P V+ G AVT
Sbjct: 2754 WTLSAGGSGTIYGWGH-NHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTA 2812
Query: 116 GGEVYTWGW 124
G++Y G+
Sbjct: 2813 DGKLYATGY 2821
Score = 43 (20.2 bits), Expect = 4.0e-15, Sum P(3) = 4.0e-15
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 220 GVRIATVAAGGRHTLALSD 238
G +I VA G H LA++D
Sbjct: 2065 GKKIVHVAVGALHCLAVTD 2083
Score = 40 (19.1 bits), Expect = 0.00037, Sum P(4) = 0.00037
Identities = 10/35 (28%), Positives = 15/35 (42%)
Query: 123 GWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTE 157
GW+ +P G G+ T D D+ + L E
Sbjct: 504 GWQRLIPEGIDIGEPLTDCLRDVDLIPPFNRMLLE 538
Score = 39 (18.8 bits), Expect = 1.0e-15, Sum P(3) = 1.0e-15
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 299 GNYVKGIACGGRHSAVIT 316
G + +ACG HS T
Sbjct: 2117 GQKITRVACGSSHSVAWT 2134
Score = 39 (18.8 bits), Expect = 2.6e-05, Sum P(4) = 2.6e-05
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 221 VRIATVAAGGRHTLALS 237
V+ V +GGRH AL+
Sbjct: 1856 VKKVAVHSGGRHATALT 1872
Score = 38 (18.4 bits), Expect = 5.2e-13, Sum P(4) = 5.2e-13
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 68 TWGSTDDLGQSYVTSGKHGE 87
T+G ++ GQS V G+ G+
Sbjct: 1555 TFGRINEPGQSAVFCGRSGK 1574
Score = 38 (18.4 bits), Expect = 6.7e-09, Sum P(4) = 6.7e-09
Identities = 6/9 (66%), Positives = 6/9 (66%)
Query: 424 DGKVFCWGW 432
DG V WGW
Sbjct: 2504 DGSVNGWGW 2512
>UNIPROTKB|E2RDC2 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0032183 "SUMO binding" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006281 GO:GO:0007283
GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 GeneTree:ENSGT00700000104208 CTD:8924
KO:K10595 OMA:QLAFTRD InterPro:IPR006624 SMART:SM00706
EMBL:AAEX03002160 EMBL:AAEX03002161 EMBL:AAEX03002162
RefSeq:XP_536160.2 ProteinModelPortal:E2RDC2
Ensembl:ENSCAFT00000015697 GeneID:479005 KEGG:cfa:479005
Uniprot:E2RDC2
Length = 4837
Score = 209 (78.6 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 54/177 (30%), Positives = 87/177 (49%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
G +V IACG +SA IT G L T+G G YG+ G GS++DE P V+ L G+++ VA
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 610
Query: 359 AGLW--HTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGAR 416
G T+ ++ +G V++ P+L++ L+++ V CG++
Sbjct: 611 CGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE--KLQDLDVVKVRCGSQ 668
Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
+ + DG+V+ WG +LG G P + ++G +VA G H L L
Sbjct: 669 FSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 725
Score = 200 (75.5 bits), Expect = 9.8e-18, Sum P(3) = 9.8e-18
Identities = 53/173 (30%), Positives = 80/173 (46%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
G V +A GG HSA +T AG L T+G G YG+ G ++D+L P V +L G ++ VA
Sbjct: 4093 GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVA 4152
Query: 359 AGLW--HTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGAR 416
G T+C++ D V++ +P +D SL + V CG++
Sbjct: 4153 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQ 4210
Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWH 468
+ + G V+ WG Y +LG G P QV ++G +A G H
Sbjct: 4211 FSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4263
Score = 189 (71.6 bits), Expect = 1.3e-15, Sum P(5) = 1.3e-15
Identities = 47/170 (27%), Positives = 82/170 (48%)
Query: 301 YVKGIAC--GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
++K +A GG+H ++ G + ++G G+ G G+ P + SL GI++ VA
Sbjct: 4041 FIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVA 4100
Query: 359 AGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGA--R 416
AG H+ C+++ GD+Y + + P+L++A L+ V+CG+
Sbjct: 4101 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA--LQGHRVVDVACGSGDA 4158
Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
T + DD V+ WG YG+LG G +P ++ ++ G V CG
Sbjct: 4159 QTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECG 4208
Score = 180 (68.4 bits), Expect = 7.6e-15, Sum P(4) = 7.6e-15
Identities = 55/203 (27%), Positives = 87/203 (42%)
Query: 274 SYGKDRSAALSRGSVNSE-GPGF--RVPGNYVKGIACGG--RHSAVITDAGALLTFGWGL 328
++GK R L + P + G+ V +ACG + +TD + ++G G
Sbjct: 4117 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGD 4176
Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXX 388
YG+ G+G +D P + SL G+ + V G ++ ++ G VY
Sbjct: 4177 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS 4236
Query: 389 DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNI 448
D PR + L+ +++ G+ H +DG+V+ WG N GQLG G
Sbjct: 4237 DDHVRRPRQVQG--LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR 4294
Query: 449 PSQVT-IEGCVPRNVACGWWHTL 470
P V ++G VACG HTL
Sbjct: 4295 PRLVAALQGKKVNRVACGSAHTL 4317
Score = 170 (64.9 bits), Expect = 4.0e-13, Sum P(3) = 4.0e-13
Identities = 55/208 (26%), Positives = 92/208 (44%)
Query: 270 CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIAC--GGRHSAVITDAGALLTFGWG 327
C E++ G+ LS G+V + VK +A GGRH+ +T G + ++G G
Sbjct: 3017 CGEATNGR-LGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075
Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXX 387
G+ G S + P + +L +I +A G H+ ++S G++Y
Sbjct: 3076 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHG 3135
Query: 388 XDQAETLPRLLDAPSLENVHSKSVSCGAR--HTAVIADDGKVFCWGWNKYGQLGLGDVID 445
+ + P+++ L V+CG+R T + D+G VF WG +G+LG G
Sbjct: 3136 DNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEG 3193
Query: 446 RNIPSQVT-IEGCVPRNVACGWWHTLLL 472
NIP + + G + CG +L L
Sbjct: 3194 CNIPQNIERLNGQGVCQIECGAQFSLAL 3221
Score = 164 (62.8 bits), Expect = 9.4e-12, Sum P(4) = 9.4e-12
Identities = 46/175 (26%), Positives = 79/175 (45%)
Query: 299 GNYVKGIACGGR--HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG 356
G+ V +ACG R + +TD G + ++G G +G+ G+G ++ P + L G +
Sbjct: 3151 GHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQ 3210
Query: 357 VAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGAR 416
+ G ++ ++ G V+ D P++++ L V+ GA
Sbjct: 3211 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG--LRGKKIVHVAVGAL 3268
Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
H + D G+V+ WG N +GQ G G P+ V +EG VACG H++
Sbjct: 3269 HCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3323
Score = 157 (60.3 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 49/202 (24%), Positives = 86/202 (42%)
Query: 274 SYGKDRSAALSRGSVNSEGPGFRVPGNYVKG-----IACGG--RHSAVITDAGALLTFGW 326
++G+ L GS E V G +KG +ACG + +T+ G + ++G
Sbjct: 575 TWGRGNYGRLGHGSSEDEAIPMLVAG--LKGLKVIDVACGSGDAQTLAVTENGQVWSWGD 632
Query: 327 GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXX 386
G YG+ G+G +D +P + L + + V G +I ++ DG VY+
Sbjct: 633 GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH 692
Query: 387 XXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR 446
++ P+LL+ L+ V+ G+ H + +D +V WG N Q D +
Sbjct: 693 GTEEHVRYPKLLEG--LQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRV 748
Query: 447 NIPSQVTIEGCVPRNV---ACG 465
P + G +++ ACG
Sbjct: 749 TKPEPAALPGLDTKHIVGIACG 770
Score = 138 (53.6 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 39/149 (26%), Positives = 68/149 (45%)
Query: 300 NYVKGIA-CGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ----I 354
N VK A G H + G + ++G G G+ G G T P +S+ G Q +
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 554
Query: 355 EGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCG 414
+A G ++ I+++G++Y + E +P L+ L+ + V+CG
Sbjct: 555 VHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV--AGLKGLKVIDVACG 612
Query: 415 A--RHTAVIADDGKVFCWGWNKYGQLGLG 441
+ T + ++G+V+ WG YG+LG G
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG 641
Score = 137 (53.3 bits), Expect = 1.3e-09, Sum P(5) = 1.3e-09
Identities = 45/150 (30%), Positives = 61/150 (40%)
Query: 274 SYGKDRSAALSRGSVNSEGPGF-----RVPGNYVKGIACGGRHSAVITDAGALLTFGWGL 328
S+G L RG SEG R+ G V I CG + S +T +G + T+G G
Sbjct: 3177 SWGDGDFGKLGRGG--SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3234
Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXX 388
Y + G GS P V L G +I VA G H + ++ G VYA
Sbjct: 3235 YFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT 3294
Query: 389 DQAETLPRLLDAPSLENVHSKSVSCGARHT 418
P L+ LE V+CG+ H+
Sbjct: 3295 TTVNRKPTLVQG--LEGQKITRVACGSSHS 3322
Score = 123 (48.4 bits), Expect = 5.5e-08, Sum P(3) = 5.5e-08
Identities = 45/170 (26%), Positives = 72/170 (42%)
Query: 310 RHSAVITDAGALLT--FGWGLYG--QCGQGSTDDELS-PNCVSSLLGIQIEGVAAGLWHT 364
+ +A + A + T F WGL Q G G ++ P+ +L + + VA G
Sbjct: 2947 KKAAGLESAATIRTKVFVWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVAGGSKSL 3005
Query: 365 ICISSDGDVYAXXXXXXXXXXXXXDQAET-LPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
++ +G VYA +PR + A S V +V G RH +
Sbjct: 3006 FAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV 3065
Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLL 472
DGKVF WG G+LG ++ + P + ++ R++ACG H+ L
Sbjct: 3066 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3115
Score = 117 (46.2 bits), Expect = 1.3e-07, Sum P(5) = 1.3e-07
Identities = 40/163 (24%), Positives = 81/163 (49%)
Query: 315 ITDAGALLTFGWGLY--GQCG--QGSTDDELSP-NCVSSLLGIQIEGVAAGLWHTICISS 369
++ G+ +GWG GQ G +G+ +P +++L +Q+ G L+ +++
Sbjct: 3949 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLF---AVTA 4005
Query: 370 DGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSK--SVSCGARHTAVIADDGKV 427
DG +YA ++ + P LL+ S+++V K +V+ G +H ++ +G+V
Sbjct: 4006 DGKLYATGYGAGGRLGIGGTESVSTPTLLE--SIQHVFIKKVAVNSGGKHCLALSSEGEV 4063
Query: 428 FCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
+ WG + G+LG G+ + P + ++ G +VA G H+
Sbjct: 4064 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4106
Score = 111 (44.1 bits), Expect = 9.8e-18, Sum P(3) = 9.8e-18
Identities = 28/77 (36%), Positives = 38/77 (49%)
Query: 49 VCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAG 106
VC CG F++A++ S + TWG D + S H P+ IV A G
Sbjct: 3208 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVG 3266
Query: 107 WAHCVAVTEGGEVYTWG 123
HC+AVT+ G+VY WG
Sbjct: 3267 ALHCLAVTDAGQVYAWG 3283
Score = 106 (42.4 bits), Expect = 1.2e-16, Sum P(4) = 1.2e-16
Identities = 24/78 (30%), Positives = 41/78 (52%)
Query: 48 DVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAA 105
DV CG F++A++ ++ +WG D+ + T +H P+ ++ AA
Sbjct: 659 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 717
Query: 106 GWAHCVAVTEGGEVYTWG 123
G HC+A+TE EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735
Score = 104 (41.7 bits), Expect = 3.7e-06, Sum P(5) = 3.7e-06
Identities = 32/97 (32%), Positives = 45/97 (46%)
Query: 274 SYGKDRSAALSRGS-VNSEGP----GFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL 328
++GK L GS V+ P G R G + +A G H +TDAG + +G
Sbjct: 3229 TWGKGDYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQVYAWGDND 3286
Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTI 365
+GQ G G+T P V L G +I VA G H++
Sbjct: 3287 HGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3323
Score = 99 (39.9 bits), Expect = 4.5e-06, Sum P(4) = 4.5e-06
Identities = 25/71 (35%), Positives = 36/71 (50%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
G V IA G H T+ G + T+G GQ G G+T+ P V++L G ++ VA
Sbjct: 4251 GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVA 4310
Query: 359 AGLWHTICISS 369
G HT+ S+
Sbjct: 4311 CGSAHTLAWST 4321
Score = 98 (39.6 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 27/80 (33%), Positives = 38/80 (47%)
Query: 48 DV-CGGGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHG-EIPEPFPLPTEASIVKA 103
DV CG G + ++D + +WG D LG+ G G ++P T +VK
Sbjct: 4150 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG----GSDGCKVPMKIDSLTGLGVVKV 4205
Query: 104 AAGWAHCVAVTEGGEVYTWG 123
G VA+T+ G VYTWG
Sbjct: 4206 ECGSQFSVALTKSGAVYTWG 4225
Score = 94 (38.1 bits), Expect = 4.0e-13, Sum P(3) = 4.0e-13
Identities = 24/80 (30%), Positives = 42/80 (52%)
Query: 48 DV-CGGGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHG-EIPEPFPLPTEASIVKA 103
DV CG G +A++++ ++ +WG D LG+ G G + P+ + +VK
Sbjct: 608 DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG----GSDGCKTPKLIEKLQDLDVVKV 663
Query: 104 AAGWAHCVAVTEGGEVYTWG 123
G +A+T+ G+VY+WG
Sbjct: 664 RCGSQFSIALTKDGQVYSWG 683
Score = 91 (37.1 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 25/77 (32%), Positives = 37/77 (48%)
Query: 49 VCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASI--VKAAAG 106
V GG +A+S ++ +WG +D G+ + G P + + I V AAG
Sbjct: 4047 VNSGG-KHCLALSSEGEVYSWGEAED-GK--LGHGNRSPCDRPRVIESLRGIEVVDVAAG 4102
Query: 107 WAHCVAVTEGGEVYTWG 123
AH VT G++YTWG
Sbjct: 4103 GAHSACVTAAGDLYTWG 4119
Score = 89 (36.4 bits), Expect = 3.3e-08, Sum P(4) = 3.3e-08
Identities = 31/92 (33%), Positives = 43/92 (46%)
Query: 49 VCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWA 108
V GG A A++ K+ +WG DD G+ S + + P I A G +
Sbjct: 3053 VHSGG-RHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3110
Query: 109 HCVAVTEGGEVYTWGWKECVPSGRV-FGDLST 139
H A+T GE+YTWG E GR+ GD +T
Sbjct: 3111 HSAALTSSGELYTWGLGEY---GRLGHGDNTT 3139
Score = 78 (32.5 bits), Expect = 5.6e-07, Sum P(5) = 5.6e-07
Identities = 32/117 (27%), Positives = 50/117 (42%)
Query: 14 VFMWGYLPGALPQRS---PILSPLVVRLPLTVGSAWRDVCGGGCG--FAMAISDSRKLIT 68
V+ WG G P+ P V+ + A + V CG ++ AI+ +L T
Sbjct: 517 VYSWGCGDGGRLGHGDTVPLEEPKVISA-FSGKQAGKHVVHIACGSTYSAAITAEGELYT 575
Query: 69 WGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGW--AHCVAVTEGGEVYTWG 123
WG + G+ S + IP ++ A G A +AVTE G+V++WG
Sbjct: 576 WGR-GNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 631
Score = 76 (31.8 bits), Expect = 3.7e-14, Sum P(3) = 3.7e-14
Identities = 20/75 (26%), Positives = 33/75 (44%)
Query: 50 CGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHG-EIPEPFPLPTEASIVKAAAGWA 108
CG +A++D + +WG D G+ G G IP+ + + G
Sbjct: 3159 CGSRDAQTLALTDEGLVFSWGD-GDFGK-LGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 3216
Query: 109 HCVAVTEGGEVYTWG 123
+A+T+ G V+TWG
Sbjct: 3217 FSLALTKSGVVWTWG 3231
Score = 69 (29.3 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 18/69 (26%), Positives = 32/69 (46%)
Query: 58 MAISDSRKLITWGSTDD--LGQSYVTSGKHGEIPEPFPLPTEAS-IVKAAAGWAHCVAVT 114
+A++ + ++ +WG D LG + ++ F +V A G + A+T
Sbjct: 509 LALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT 568
Query: 115 EGGEVYTWG 123
GE+YTWG
Sbjct: 569 AEGELYTWG 577
Score = 69 (29.3 bits), Expect = 2.9e-06, Sum P(4) = 2.9e-06
Identities = 26/87 (29%), Positives = 39/87 (44%)
Query: 55 GFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVT 114
G A + K+ WG +D Q G ++P + ++V+ A G AVT
Sbjct: 2951 GLESAATIRTKVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT 3009
Query: 115 EGGEVYTWGWKECVPSGRVFGDLSTGT 141
G+VY G E +GR+ LS+GT
Sbjct: 3010 VEGKVYACG--EAT-NGRLGLGLSSGT 3033
Score = 68 (29.0 bits), Expect = 1.2e-12, Sum P(4) = 1.2e-12
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 101 VKAAAGWAHCVAVTEGGEVYTWGWKE 126
V +G HC+A++ GEVY+WG E
Sbjct: 4045 VAVNSGGKHCLALSSEGEVYSWGEAE 4070
Score = 61 (26.5 bits), Expect = 4.3e-05, Sum P(5) = 4.3e-05
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 86 GEIPEPFPLPTEAS-IVKAAA---GWAHCVAVTEGGEVYTWG 123
G +P P + +S +VK A G H A+T G+V++WG
Sbjct: 3032 GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3073
Score = 60 (26.2 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 18/41 (43%), Positives = 23/41 (56%)
Query: 99 SIVKAAA--GWAHCVAVTEGGEVYTWGWKECVPSGRV-FGD 136
+IVK AA H +A+ GEVY+WG C GR+ GD
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWG---CGDGGRLGHGD 532
Score = 53 (23.7 bits), Expect = 4.0e-13, Sum P(3) = 4.0e-13
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSD 238
G E +P L+ G ++ VAAG H LAL++
Sbjct: 693 GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727
Score = 52 (23.4 bits), Expect = 1.3e-15, Sum P(5) = 1.3e-15
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGR--HTLALSD 238
GD P +V + G R+ VA G R TLAL+D
Sbjct: 3135 GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3171
Score = 50 (22.7 bits), Expect = 0.00024, Sum P(5) = 0.00024
Identities = 21/67 (31%), Positives = 29/67 (43%)
Query: 48 DVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLP--TEASIVKAAA 105
DV G +A+++ ++ +WGS D Q + T PEP LP IV A
Sbjct: 714 DVAAGST-HCLALTEDSEVHSWGSNDQC-QHFDTL--RVTKPEPAALPGLDTKHIVGIAC 769
Query: 106 GWAHCVA 112
G A A
Sbjct: 770 GPAQSFA 776
Score = 48 (22.0 bits), Expect = 9.8e-18, Sum P(3) = 9.8e-18
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 198 AESSSSGDENLSAF--PCLVTLNPGVRIATVAAGGRHTLALS 237
AE G N S P ++ G+ + VAAGG H+ ++
Sbjct: 4069 AEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT 4110
Score = 47 (21.6 bits), Expect = 1.2e-16, Sum P(4) = 1.2e-16
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALS 237
G E++S P L+ V I VA +GG+H LALS
Sbjct: 4024 GTESVST-PTLLESIQHVFIKKVAVNSGGKHCLALS 4058
Score = 47 (21.6 bits), Expect = 3.2e-11, Sum P(3) = 3.2e-11
Identities = 16/62 (25%), Positives = 27/62 (43%)
Query: 53 GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
G +A++D+ ++ WG D Q T+ + + P I + A G +H VA
Sbjct: 3266 GALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRK-PTLVQGLEGQKITRVACGSSHSVA 3324
Query: 113 VT 114
T
Sbjct: 3325 WT 3326
Score = 47 (21.6 bits), Expect = 3.2e-11, Sum P(3) = 3.2e-11
Identities = 16/69 (23%), Positives = 27/69 (39%)
Query: 56 FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTE 115
+ ++ S + WG + GQ G ++P P V+ G AVT
Sbjct: 3947 WTLSAGGSGTIYGWGH-NHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTA 4005
Query: 116 GGEVYTWGW 124
G++Y G+
Sbjct: 4006 DGKLYATGY 4014
Score = 43 (20.2 bits), Expect = 1.0e-14, Sum P(5) = 1.0e-14
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 220 GVRIATVAAGGRHTLALSD 238
G +I VA G H LA++D
Sbjct: 3257 GKKIVHVAVGALHCLAVTD 3275
Score = 43 (20.2 bits), Expect = 2.2e-05, Sum P(4) = 2.2e-05
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 202 SSGDENLSAFPCLVTLNPGVRIATVAAGG--RHTLALSD 238
SS DE A P LV G+++ VA G TLA+++
Sbjct: 588 SSEDE---AIPMLVAGLKGLKVIDVACGSGDAQTLAVTE 623
Score = 40 (19.1 bits), Expect = 1.2e-16, Sum P(4) = 1.2e-16
Identities = 10/35 (28%), Positives = 15/35 (42%)
Query: 123 GWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTE 157
GW+ +P G G+ T D D+ + L E
Sbjct: 1696 GWQRLIPEGIDIGEPLTDCLKDVDLIPPFNRMLLE 1730
Score = 39 (18.8 bits), Expect = 1.3e-15, Sum P(5) = 1.3e-15
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 299 GNYVKGIACGGRHSAVIT 316
G + +ACG HS T
Sbjct: 3309 GQKITRVACGSSHSVAWT 3326
Score = 39 (18.8 bits), Expect = 9.4e-12, Sum P(4) = 9.4e-12
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 221 VRIATVAAGGRHTLALS 237
V+ V +GGRH AL+
Sbjct: 3048 VKKVAVHSGGRHATALT 3064
Score = 38 (18.4 bits), Expect = 1.3e-09, Sum P(5) = 1.3e-09
Identities = 6/9 (66%), Positives = 6/9 (66%)
Query: 424 DGKVFCWGW 432
DG V WGW
Sbjct: 3697 DGSVNGWGW 3705
Score = 37 (18.1 bits), Expect = 1.2e-12, Sum P(4) = 1.2e-12
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 68 TWGSTDDLGQSYVTSGKHGE 87
T+G ++ GQS + G+ G+
Sbjct: 2747 TFGRINEPGQSAIFCGRSGK 2766
>UNIPROTKB|O95714 [details] [associations]
symbol:HERC2 "E3 ubiquitin-protein ligase HERC2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0020037 "heme binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=NAS] [GO:0006886 "intracellular protein transport"
evidence=NAS] [GO:0006281 "DNA repair" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IPI] [GO:0032183 "SUMO binding"
evidence=IDA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS00191 PROSITE:PS01357 PROSITE:PS50082
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS50294
PROSITE:PS51416 SMART:SM00119 SMART:SM00291 UniPathway:UPA00143
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
Reactome:REACT_6900 GO:GO:0006886 GO:GO:0005814 PROSITE:PS00678
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006281
GO:GO:0007283 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0005085 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
Pfam:PF03256 PROSITE:PS51284 GO:GO:0042787 GO:GO:0032183
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 eggNOG:COG5021 CTD:8924 KO:K10595
OMA:QLAFTRD EMBL:AF071172 EMBL:AC091304 EMBL:AC126332 EMBL:AC135329
EMBL:AF224243 EMBL:AF224242 EMBL:AF224245 EMBL:AF224244
EMBL:AF224249 EMBL:AF224246 EMBL:AF224247 EMBL:AF224248
EMBL:AF224251 EMBL:AF224250 EMBL:AF224255 EMBL:AF224254
EMBL:AF224252 EMBL:AF224253 EMBL:AF224257 EMBL:AF224256
EMBL:AF225401 EMBL:AF225400 EMBL:AF225404 EMBL:AF225402
EMBL:AF225403 EMBL:AF225407 EMBL:AF225405 EMBL:AF225406
EMBL:AF225409 EMBL:AF225408 IPI:IPI00005826 RefSeq:NP_004658.3
UniGene:Hs.434890 UniGene:Hs.610412 UniGene:Hs.741019 PDB:2KEO
PDB:3KCI PDBsum:2KEO PDBsum:3KCI ProteinModelPortal:O95714
SMR:O95714 DIP:DIP-37632N IntAct:O95714 STRING:O95714
PhosphoSite:O95714 PaxDb:O95714 PRIDE:O95714
Ensembl:ENST00000261609 GeneID:8924 KEGG:hsa:8924 UCSC:uc001zbj.3
GeneCards:GC15M028356 H-InvDB:HIX0012044 H-InvDB:HIX0017540
H-InvDB:HIX0038121 H-InvDB:HIX0038320 H-InvDB:HIX0038830
H-InvDB:HIX0173226 H-InvDB:HIX0173299 H-InvDB:HIX0194348
HGNC:HGNC:4868 HPA:CAB017188 MIM:227220 MIM:605837
neXtProt:NX_O95714 PharmGKB:PA29243 HOVERGEN:HBG081598
InParanoid:O95714 OrthoDB:EOG41C6V9 PhylomeDB:O95714
EvolutionaryTrace:O95714 GenomeRNAi:8924 NextBio:33552
ArrayExpress:O95714 Bgee:O95714 Genevestigator:O95714
GermOnline:ENSG00000128731 InterPro:IPR006624 SMART:SM00706
Uniprot:O95714
Length = 4834
Score = 209 (78.6 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 54/177 (30%), Positives = 87/177 (49%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
G +V IACG +SA IT G L T+G G YG+ G GS++DE P V+ L G+++ VA
Sbjct: 550 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 609
Query: 359 AGLW--HTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGAR 416
G T+ ++ +G V++ P+L++ L+++ V CG++
Sbjct: 610 CGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE--KLQDLDVVKVRCGSQ 667
Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
+ + DG+V+ WG +LG G P + ++G +VA G H L L
Sbjct: 668 FSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 724
Score = 199 (75.1 bits), Expect = 1.3e-17, Sum P(3) = 1.3e-17
Identities = 52/173 (30%), Positives = 80/173 (46%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
G V +A GG HSA +T AG L T+G G YG+ G ++D+L P V +L G ++ +A
Sbjct: 4090 GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIA 4149
Query: 359 AGLW--HTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGAR 416
G T+C++ D V++ +P +D SL + V CG++
Sbjct: 4150 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQ 4207
Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWH 468
+ + G V+ WG Y +LG G P QV ++G +A G H
Sbjct: 4208 FSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4260
Score = 188 (71.2 bits), Expect = 1.7e-15, Sum P(5) = 1.7e-15
Identities = 46/170 (27%), Positives = 82/170 (48%)
Query: 301 YVKGIAC--GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
++K +A GG+H ++ G + ++G G+ G G+ P + SL GI++ VA
Sbjct: 4038 FIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVA 4097
Query: 359 AGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGA--R 416
AG H+ C+++ GD+Y + + P+L++A L+ ++CG+
Sbjct: 4098 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA--LQGHRVVDIACGSGDA 4155
Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
T + DD V+ WG YG+LG G +P ++ ++ G V CG
Sbjct: 4156 QTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECG 4205
Score = 181 (68.8 bits), Expect = 5.7e-15, Sum P(4) = 5.7e-15
Identities = 56/203 (27%), Positives = 87/203 (42%)
Query: 274 SYGKDRSAALSRGSVNSE-GPGF--RVPGNYVKGIACGG--RHSAVITDAGALLTFGWGL 328
++GK R L + P + G+ V IACG + +TD + ++G G
Sbjct: 4114 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 4173
Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXX 388
YG+ G+G +D P + SL G+ + V G ++ ++ G VY
Sbjct: 4174 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS 4233
Query: 389 DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNI 448
D PR + L+ +++ G+ H +DG+V+ WG N GQLG G
Sbjct: 4234 DDHVRRPRQVQG--LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR 4291
Query: 449 PSQVT-IEGCVPRNVACGWWHTL 470
P V ++G VACG HTL
Sbjct: 4292 PRLVAALQGKKVNRVACGSAHTL 4314
Score = 168 (64.2 bits), Expect = 6.7e-13, Sum P(3) = 6.7e-13
Identities = 54/208 (25%), Positives = 92/208 (44%)
Query: 270 CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIAC--GGRHSAVITDAGALLTFGWG 327
C E++ G+ +S G+V + VK +A GGRH+ +T G + ++G G
Sbjct: 3016 CGEATNGR-LGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3074
Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXX 387
G+ G S + P + +L +I +A G H+ ++S G++Y
Sbjct: 3075 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHG 3134
Query: 388 XDQAETLPRLLDAPSLENVHSKSVSCGAR--HTAVIADDGKVFCWGWNKYGQLGLGDVID 445
+ + P+++ L V+CG+R T + D+G VF WG +G+LG G
Sbjct: 3135 DNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEG 3192
Query: 446 RNIPSQVT-IEGCVPRNVACGWWHTLLL 472
NIP + + G + CG +L L
Sbjct: 3193 CNIPQNIERLNGQGVCQIECGAQFSLAL 3220
Score = 166 (63.5 bits), Expect = 5.6e-12, Sum P(4) = 5.6e-12
Identities = 46/175 (26%), Positives = 79/175 (45%)
Query: 299 GNYVKGIACGGR--HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG 356
G+ V +ACG R + +TD G + ++G G +G+ G+G ++ P + L G +
Sbjct: 3150 GHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQ 3209
Query: 357 VAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGAR 416
+ G ++ ++ G V+ D P++++ L V+ GA
Sbjct: 3210 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG--LRGKKIVHVAVGAL 3267
Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
H + D G+V+ WG N +GQ G G P+ V +EG VACG H++
Sbjct: 3268 HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3322
Score = 157 (60.3 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 49/202 (24%), Positives = 86/202 (42%)
Query: 274 SYGKDRSAALSRGSVNSEGPGFRVPGNYVKG-----IACGG--RHSAVITDAGALLTFGW 326
++G+ L GS E V G +KG +ACG + +T+ G + ++G
Sbjct: 574 TWGRGNYGRLGHGSSEDEAIPMLVAG--LKGLKVIDVACGSGDAQTLAVTENGQVWSWGD 631
Query: 327 GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXX 386
G YG+ G+G +D +P + L + + V G +I ++ DG VY+
Sbjct: 632 GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH 691
Query: 387 XXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR 446
++ P+LL+ L+ V+ G+ H + +D +V WG N Q D +
Sbjct: 692 GTEEHVRYPKLLEG--LQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRV 747
Query: 447 NIPSQVTIEGCVPRNV---ACG 465
P + G +++ ACG
Sbjct: 748 TKPEPAALPGLDTKHIVGIACG 769
Score = 139 (54.0 bits), Expect = 7.6e-10, Sum P(5) = 7.6e-10
Identities = 45/150 (30%), Positives = 61/150 (40%)
Query: 274 SYGKDRSAALSRGSVNSEGPGF-----RVPGNYVKGIACGGRHSAVITDAGALLTFGWGL 328
S+G L RG SEG R+ G V I CG + S +T +G + T+G G
Sbjct: 3176 SWGDGDFGKLGRGG--SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3233
Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXX 388
Y + G GS P V L G +I VA G H + ++ G VYA
Sbjct: 3234 YFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 3293
Query: 389 DQAETLPRLLDAPSLENVHSKSVSCGARHT 418
P L+ LE V+CG+ H+
Sbjct: 3294 TTVNRKPTLVQG--LEGQKITRVACGSSHS 3321
Score = 138 (53.6 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 39/149 (26%), Positives = 68/149 (45%)
Query: 300 NYVKGIA-CGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ----I 354
N VK A G H + G + ++G G G+ G G T P +S+ G Q +
Sbjct: 494 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 553
Query: 355 EGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCG 414
+A G ++ I+++G++Y + E +P L+ L+ + V+CG
Sbjct: 554 VHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV--AGLKGLKVIDVACG 611
Query: 415 A--RHTAVIADDGKVFCWGWNKYGQLGLG 441
+ T + ++G+V+ WG YG+LG G
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG 640
Score = 123 (48.4 bits), Expect = 5.5e-08, Sum P(3) = 5.5e-08
Identities = 45/170 (26%), Positives = 72/170 (42%)
Query: 310 RHSAVITDAGALLT--FGWGLYG--QCGQGSTDDELS-PNCVSSLLGIQIEGVAAGLWHT 364
+ +A + A + T F WGL Q G G ++ P+ +L + + VA G
Sbjct: 2946 KKAAGLESAATIRTKVFVWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVAGGSKSL 3004
Query: 365 ICISSDGDVYAXXXXXXXXXXXXXDQAET-LPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
++ +G VYA +PR + A S V +V G RH +
Sbjct: 3005 FAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV 3064
Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLL 472
DGKVF WG G+LG ++ + P + ++ R++ACG H+ L
Sbjct: 3065 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3114
Score = 117 (46.2 bits), Expect = 1.3e-07, Sum P(5) = 1.3e-07
Identities = 40/163 (24%), Positives = 81/163 (49%)
Query: 315 ITDAGALLTFGWGLY--GQCG--QGSTDDELSP-NCVSSLLGIQIEGVAAGLWHTICISS 369
++ G+ +GWG GQ G +G+ +P +++L +Q+ G L+ +++
Sbjct: 3946 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLF---AVTA 4002
Query: 370 DGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSK--SVSCGARHTAVIADDGKV 427
DG +YA ++ + P LL+ S+++V K +V+ G +H ++ +G+V
Sbjct: 4003 DGKLYATGYGAGGRLGIGGTESVSTPTLLE--SIQHVFIKKVAVNSGGKHCLALSSEGEV 4060
Query: 428 FCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
+ WG + G+LG G+ + P + ++ G +VA G H+
Sbjct: 4061 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4103
Score = 111 (44.1 bits), Expect = 1.3e-17, Sum P(3) = 1.3e-17
Identities = 28/77 (36%), Positives = 38/77 (49%)
Query: 49 VCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAG 106
VC CG F++A++ S + TWG D + S H P+ IV A G
Sbjct: 3207 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVG 3265
Query: 107 WAHCVAVTEGGEVYTWG 123
HC+AVT+ G+VY WG
Sbjct: 3266 ALHCLAVTDSGQVYAWG 3282
Score = 106 (42.4 bits), Expect = 1.6e-16, Sum P(4) = 1.6e-16
Identities = 24/78 (30%), Positives = 41/78 (52%)
Query: 48 DVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAA 105
DV CG F++A++ ++ +WG D+ + T +H P+ ++ AA
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 716
Query: 106 GWAHCVAVTEGGEVYTWG 123
G HC+A+TE EV++WG
Sbjct: 717 GSTHCLALTEDSEVHSWG 734
Score = 101 (40.6 bits), Expect = 7.1e-06, Sum P(5) = 7.1e-06
Identities = 31/97 (31%), Positives = 45/97 (46%)
Query: 274 SYGKDRSAALSRGS-VNSEGP----GFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL 328
++GK L GS V+ P G R G + +A G H +TD+G + +G
Sbjct: 3228 TWGKGDYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDND 3285
Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTI 365
+GQ G G+T P V L G +I VA G H++
Sbjct: 3286 HGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3322
Score = 99 (39.9 bits), Expect = 4.5e-06, Sum P(4) = 4.5e-06
Identities = 25/71 (35%), Positives = 36/71 (50%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
G V IA G H T+ G + T+G GQ G G+T+ P V++L G ++ VA
Sbjct: 4248 GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVA 4307
Query: 359 AGLWHTICISS 369
G HT+ S+
Sbjct: 4308 CGSAHTLAWST 4318
Score = 97 (39.2 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 25/77 (32%), Positives = 36/77 (46%)
Query: 50 CGGGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHG-EIPEPFPLPTEASIVKAAAG 106
CG G + ++D + +WG D LG+ G G ++P T +VK G
Sbjct: 4150 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG----GSDGCKVPMKIDSLTGLGVVKVECG 4205
Query: 107 WAHCVAVTEGGEVYTWG 123
VA+T+ G VYTWG
Sbjct: 4206 SQFSVALTKSGAVYTWG 4222
Score = 94 (38.1 bits), Expect = 6.7e-13, Sum P(3) = 6.7e-13
Identities = 24/80 (30%), Positives = 42/80 (52%)
Query: 48 DV-CGGGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHG-EIPEPFPLPTEASIVKA 103
DV CG G +A++++ ++ +WG D LG+ G G + P+ + +VK
Sbjct: 607 DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG----GSDGCKTPKLIEKLQDLDVVKV 662
Query: 104 AAGWAHCVAVTEGGEVYTWG 123
G +A+T+ G+VY+WG
Sbjct: 663 RCGSQFSIALTKDGQVYSWG 682
Score = 91 (37.1 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 25/77 (32%), Positives = 37/77 (48%)
Query: 49 VCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASI--VKAAAG 106
V GG +A+S ++ +WG +D G+ + G P + + I V AAG
Sbjct: 4044 VNSGG-KHCLALSSEGEVYSWGEAED-GK--LGHGNRSPCDRPRVIESLRGIEVVDVAAG 4099
Query: 107 WAHCVAVTEGGEVYTWG 123
AH VT G++YTWG
Sbjct: 4100 GAHSACVTAAGDLYTWG 4116
Score = 89 (36.4 bits), Expect = 2.0e-08, Sum P(4) = 2.0e-08
Identities = 31/92 (33%), Positives = 43/92 (46%)
Query: 49 VCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWA 108
V GG A A++ K+ +WG DD G+ S + + P I A G +
Sbjct: 3052 VHSGG-RHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3109
Query: 109 HCVAVTEGGEVYTWGWKECVPSGRV-FGDLST 139
H A+T GE+YTWG E GR+ GD +T
Sbjct: 3110 HSAALTSSGELYTWGLGEY---GRLGHGDNTT 3138
Score = 78 (32.5 bits), Expect = 3.4e-07, Sum P(5) = 3.4e-07
Identities = 32/117 (27%), Positives = 50/117 (42%)
Query: 14 VFMWGYLPGALPQRS---PILSPLVVRLPLTVGSAWRDVCGGGCG--FAMAISDSRKLIT 68
V+ WG G P+ P V+ + A + V CG ++ AI+ +L T
Sbjct: 516 VYSWGCGDGGRLGHGDTVPLEEPKVISA-FSGKQAGKHVVHIACGSTYSAAITAEGELYT 574
Query: 69 WGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGW--AHCVAVTEGGEVYTWG 123
WG + G+ S + IP ++ A G A +AVTE G+V++WG
Sbjct: 575 WGR-GNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 630
Score = 76 (31.8 bits), Expect = 4.8e-14, Sum P(3) = 4.8e-14
Identities = 20/75 (26%), Positives = 33/75 (44%)
Query: 50 CGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHG-EIPEPFPLPTEASIVKAAAGWA 108
CG +A++D + +WG D G+ G G IP+ + + G
Sbjct: 3158 CGSRDAQTLALTDEGLVFSWGD-GDFGK-LGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 3215
Query: 109 HCVAVTEGGEVYTWG 123
+A+T+ G V+TWG
Sbjct: 3216 FSLALTKSGVVWTWG 3230
Score = 69 (29.3 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 18/69 (26%), Positives = 32/69 (46%)
Query: 58 MAISDSRKLITWGSTDD--LGQSYVTSGKHGEIPEPFPLPTEAS-IVKAAAGWAHCVAVT 114
+A++ + ++ +WG D LG + ++ F +V A G + A+T
Sbjct: 508 LALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT 567
Query: 115 EGGEVYTWG 123
GE+YTWG
Sbjct: 568 AEGELYTWG 576
Score = 68 (29.0 bits), Expect = 1.2e-12, Sum P(4) = 1.2e-12
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 101 VKAAAGWAHCVAVTEGGEVYTWGWKE 126
V +G HC+A++ GEVY+WG E
Sbjct: 4042 VAVNSGGKHCLALSSEGEVYSWGEAE 4067
Score = 67 (28.6 bits), Expect = 2.8e-06, Sum P(4) = 2.8e-06
Identities = 25/87 (28%), Positives = 39/87 (44%)
Query: 55 GFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVT 114
G A + K+ WG +D Q G ++P + ++V+ A G AVT
Sbjct: 2950 GLESAATIRTKVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT 3008
Query: 115 EGGEVYTWGWKECVPSGRVFGDLSTGT 141
G+VY G E +GR+ +S+GT
Sbjct: 3009 VEGKVYACG--EAT-NGRLGLGISSGT 3032
Score = 62 (26.9 bits), Expect = 8.5e-06, Sum P(4) = 8.5e-06
Identities = 23/78 (29%), Positives = 37/78 (47%)
Query: 52 GGCGFAMAISDSRKLITWGSTDD--LGQSYVTSGKHGEIPEPFPLPTEAS-IVKAAA--- 105
GG A++ K+ G + LG ++SG +P P + +S +VK A
Sbjct: 2999 GGSKSLFAVTVEGKVYACGEATNGRLGLG-ISSGT---VPIPRQITALSSYVVKKVAVHS 3054
Query: 106 GWAHCVAVTEGGEVYTWG 123
G H A+T G+V++WG
Sbjct: 3055 GGRHATALTVDGKVFSWG 3072
Score = 60 (26.2 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 18/41 (43%), Positives = 23/41 (56%)
Query: 99 SIVKAAA--GWAHCVAVTEGGEVYTWGWKECVPSGRV-FGD 136
+IVK AA H +A+ GEVY+WG C GR+ GD
Sbjct: 494 NIVKIAAHSDGHHYLALAATGEVYSWG---CGDGGRLGHGD 531
Score = 53 (23.7 bits), Expect = 6.7e-13, Sum P(3) = 6.7e-13
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSD 238
G E +P L+ G ++ VAAG H LAL++
Sbjct: 692 GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 726
Score = 52 (23.4 bits), Expect = 1.7e-15, Sum P(5) = 1.7e-15
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGR--HTLALSD 238
GD P +V + G R+ VA G R TLAL+D
Sbjct: 3134 GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3170
Score = 50 (22.7 bits), Expect = 2.1e-11, Sum P(3) = 2.1e-11
Identities = 17/62 (27%), Positives = 27/62 (43%)
Query: 53 GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
G +A++DS ++ WG D Q T+ + + P I + A G +H VA
Sbjct: 3265 GALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK-PTLVQGLEGQKITRVACGSSHSVA 3323
Query: 113 VT 114
T
Sbjct: 3324 WT 3325
Score = 50 (22.7 bits), Expect = 0.00015, Sum P(5) = 0.00015
Identities = 21/67 (31%), Positives = 29/67 (43%)
Query: 48 DVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLP--TEASIVKAAA 105
DV G +A+++ ++ +WGS D Q + T PEP LP IV A
Sbjct: 713 DVAAGST-HCLALTEDSEVHSWGSNDQC-QHFDTL--RVTKPEPAALPGLDTKHIVGIAC 768
Query: 106 GWAHCVA 112
G A A
Sbjct: 769 GPAQSFA 775
Score = 48 (22.0 bits), Expect = 1.3e-17, Sum P(3) = 1.3e-17
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 198 AESSSSGDENLSAF--PCLVTLNPGVRIATVAAGGRHTLALS 237
AE G N S P ++ G+ + VAAGG H+ ++
Sbjct: 4066 AEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT 4107
Score = 47 (21.6 bits), Expect = 1.6e-16, Sum P(4) = 1.6e-16
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALS 237
G E++S P L+ V I VA +GG+H LALS
Sbjct: 4021 GTESVST-PTLLESIQHVFIKKVAVNSGGKHCLALS 4055
Score = 47 (21.6 bits), Expect = 4.2e-11, Sum P(3) = 4.2e-11
Identities = 16/69 (23%), Positives = 27/69 (39%)
Query: 56 FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTE 115
+ ++ S + WG + GQ G ++P P V+ G AVT
Sbjct: 3944 WTLSAGGSGTIYGWGH-NHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTA 4002
Query: 116 GGEVYTWGW 124
G++Y G+
Sbjct: 4003 DGKLYATGY 4011
Score = 43 (20.2 bits), Expect = 3.9e-16, Sum P(4) = 3.9e-16
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 220 GVRIATVAAGGRHTLALSD 238
G +I VA G H LA++D
Sbjct: 3256 GKKIVHVAVGALHCLAVTD 3274
Score = 43 (20.2 bits), Expect = 1.3e-05, Sum P(4) = 1.3e-05
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 202 SSGDENLSAFPCLVTLNPGVRIATVAAGG--RHTLALSD 238
SS DE A P LV G+++ VA G TLA+++
Sbjct: 587 SSEDE---AIPMLVAGLKGLKVIDVACGSGDAQTLAVTE 622
Score = 40 (19.1 bits), Expect = 1.6e-16, Sum P(4) = 1.6e-16
Identities = 10/35 (28%), Positives = 15/35 (42%)
Query: 123 GWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTE 157
GW+ +P G G+ T D D+ + L E
Sbjct: 1695 GWQRLIPEGIDIGEPLTDCLKDVDLIPPFNRMLLE 1729
Score = 39 (18.8 bits), Expect = 1.7e-15, Sum P(5) = 1.7e-15
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 299 GNYVKGIACGGRHSAVIT 316
G + +ACG HS T
Sbjct: 3308 GQKITRVACGSSHSVAWT 3325
Score = 39 (18.8 bits), Expect = 5.6e-12, Sum P(4) = 5.6e-12
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 221 VRIATVAAGGRHTLALS 237
V+ V +GGRH AL+
Sbjct: 3047 VKKVAVHSGGRHATALT 3063
Score = 38 (18.4 bits), Expect = 1.2e-12, Sum P(4) = 1.2e-12
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 68 TWGSTDDLGQSYVTSGKHGE 87
T+G ++ GQS V G+ G+
Sbjct: 2746 TFGRINEPGQSAVFCGRSGK 2765
Score = 38 (18.4 bits), Expect = 7.6e-10, Sum P(5) = 7.6e-10
Identities = 6/9 (66%), Positives = 6/9 (66%)
Query: 424 DGKVFCWGW 432
DG V WGW
Sbjct: 3694 DGSVNGWGW 3702
>RGD|1310971 [details] [associations]
symbol:Herc4 "HECT and RLD domain containing E3 ubiquitin
protein ligase 4" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;IBA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA;ISO;ISS]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IBA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143 RGD:1310971
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829 GO:GO:0005634
GO:GO:0005737 GO:GO:0030154 GO:GO:0007283 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 GeneTree:ENSGT00660000095216
HOGENOM:HOG000208452 HOVERGEN:HBG050878 HSSP:Q9UEP9 CTD:26091
KO:K10615 OMA:KLVIQPT OrthoDB:EOG44XJG1 EMBL:BC087104
IPI:IPI00360837 RefSeq:NP_001012074.1 UniGene:Rn.18143
ProteinModelPortal:Q5PQN1 PhosphoSite:Q5PQN1 PRIDE:Q5PQN1
Ensembl:ENSRNOT00000051367 GeneID:309758 KEGG:rno:309758
UCSC:RGD:1310971 InParanoid:Q5PQN1 NextBio:661276
ArrayExpress:Q5PQN1 Genevestigator:Q5PQN1 Uniprot:Q5PQN1
Length = 1057
Score = 213 (80.0 bits), Expect = 6.7e-14, Sum P(2) = 6.7e-14
Identities = 56/176 (31%), Positives = 87/176 (49%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLY--GQCG-QGSTDDELSPNCVSSLLGIQIEGVA 358
+ ++CG H+ + D G + + WGL GQ G QGS + P + SL IQI VA
Sbjct: 86 IVAVSCGEAHTLALNDKGQV--YAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 359 AGLWHTICISSDGDVYAXXXXXXXXXXXXXD-QAETLPRLLDAPSLENVHSKSVSCGARH 417
G +H++ +S +V+ + Q +T P+L+ SL + V+ G H
Sbjct: 144 CGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIK--SLLGIPFMQVAAGGAH 201
Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLL 472
+ V+ G +F WG NK+GQLGL D DR +P+ + ++ + CG HT L
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257
Score = 204 (76.9 bits), Expect = 5.7e-13, P = 5.7e-13
Identities = 53/176 (30%), Positives = 83/176 (47%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
V+ + CG RH+ + D G + T G GQ G + + P V +L I V+ G
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93
Query: 362 WHTICISSDGDVYA-XXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
HT+ ++ G VYA ++ +PR + SL ++ V+CG H+
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLA 151
Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
++ +VFCWG NKYGQLGLG + Q+ ++ G VA G H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL 207
Score = 202 (76.2 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 52/167 (31%), Positives = 75/167 (44%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDELSPNCVSSLLGIQIEGVAAGLWH 363
+ACG HS ++ A + +G YGQ G G + SP + SLLGI VAAG H
Sbjct: 142 VACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAH 201
Query: 364 TICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
+ ++ G ++ + +P LL SL + + CG HTA +
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTK 259
Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
+G VF +G YGQLG P +V + G + +ACG HT
Sbjct: 260 EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306
Score = 184 (69.8 bits), Expect = 9.3e-11, P = 9.3e-11
Identities = 53/160 (33%), Positives = 78/160 (48%)
Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXX 378
+L +G YGQ G G D+E L P + ++ V GL HT+ + DG VY
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 379 XXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
+++ P + A +N+ +VSCG HT + D G+V+ WG + GQL
Sbjct: 61 NDLGQLGH--EKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 439 GL-GDV----IDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
GL G + RNI S I+ V VACG++H+L L+
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQ-IV--QVACGYYHSLALS 153
Score = 178 (67.7 bits), Expect = 4.6e-15, Sum P(3) = 4.6e-15
Identities = 47/155 (30%), Positives = 72/155 (46%)
Query: 305 IACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
+A GG HS V+T +GA+ FGWG +GQ G +D PN + SL +I + G
Sbjct: 195 VAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGED 252
Query: 363 HTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVI 421
HT ++ +G V+ E PR + L ++CG +HT A +
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF--ELMGSIVTQIACGRQHTSAFV 310
Query: 422 ADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEG 456
G+++ +G GQLG G +R P T++G
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSP--FTVKG 343
Score = 101 (40.6 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 27/74 (36%), Positives = 38/74 (51%)
Query: 274 SYGKDRSAALSRGSVNSE-GPG--FRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLY 329
++G L S + E P F + G+ V IACG +H SA + +G + +FG G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Query: 330 GQCGQGSTDDELSP 343
GQ G GST + SP
Sbjct: 325 GQLGTGSTSNRKSP 338
Score = 92 (37.4 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 21/80 (26%), Positives = 41/80 (51%)
Query: 47 RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHG-EIPEPFPLPTEASIVKA 103
+++ CG A +A++D ++ WG D GQ + + +P ++ IV+
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSD-GQLGLQGSEECIRVPRNIKSLSDIQIVQV 142
Query: 104 AAGWAHCVAVTEGGEVYTWG 123
A G+ H +A+++ EV+ WG
Sbjct: 143 ACGYYHSLALSKASEVFCWG 162
Score = 87 (35.7 bits), Expect = 3.3e-17, Sum P(3) = 3.3e-17
Identities = 27/79 (34%), Positives = 39/79 (49%)
Query: 47 RDVCGGGCGF--AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
RDV GCG + + D + T G +DLGQ + K + PE +IV +
Sbjct: 37 RDV---GCGLRHTVFVLDDGTVYTCGC-NDLGQ--LGHEKSRKKPEQVVALDAQNIVAVS 90
Query: 105 AGWAHCVAVTEGGEVYTWG 123
G AH +A+ + G+VY WG
Sbjct: 91 CGEAHTLALNDKGQVYAWG 109
Score = 68 (29.0 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 28/116 (24%), Positives = 48/116 (41%)
Query: 14 VFMWGY-LPGALPQRSPILSPLVVRLPLTVGSAWR-DVCGGGCGF--AMAISDSRKLITW 69
V+ WG G L + S +R+P + S + CG+ ++A+S + ++ W
Sbjct: 105 VYAWGLDSDGQLGLQG---SEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCW 161
Query: 70 GSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
G LG + K P+ ++ AAG AH +T G ++ WG
Sbjct: 162 GQNKYGQLGLG-IECQKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWG 215
Score = 45 (20.9 bits), Expect = 6.7e-14, Sum P(2) = 6.7e-14
Identities = 13/35 (37%), Positives = 15/35 (42%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSD 238
G E P V I V+ G HTLAL+D
Sbjct: 67 GHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALND 101
Score = 44 (20.5 bits), Expect = 4.6e-15, Sum P(3) = 4.6e-15
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 212 PCLVTLNPGVRIATVAAGGRHTLALS 237
P L+ G+ VAAGG H+ L+
Sbjct: 181 PQLIKSLLGIPFMQVAAGGAHSFVLT 206
Score = 43 (20.2 bits), Expect = 3.3e-17, Sum P(3) = 3.3e-17
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS 237
G E P + ++I VA G H+LALS
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
Score = 38 (18.4 bits), Expect = 6.0e-06, Sum P(3) = 6.0e-06
Identities = 11/33 (33%), Positives = 15/33 (45%)
Query: 205 DENLSAFPCLVTLNPGVRIATVAAGGRHTLALS 237
DEN P L+ +I + G HT AL+
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYICCGEDHTAALT 258
>UNIPROTKB|D4ACN3 [details] [associations]
symbol:Herc2 "Protein Herc2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006281
GO:GO:0007283 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 OrthoDB:EOG41C6V9 InterPro:IPR006624
SMART:SM00706 IPI:IPI00764717 Ensembl:ENSRNOT00000019245
ArrayExpress:D4ACN3 Uniprot:D4ACN3
Length = 4779
Score = 208 (78.3 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 54/177 (30%), Positives = 87/177 (49%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
G +V IACG +SA IT G L T+G G YG+ G GS++DE P V+ L G+++ VA
Sbjct: 496 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 555
Query: 359 AGLW--HTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGAR 416
G T+ ++ +G V++ P+L++ L+++ V CG++
Sbjct: 556 CGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE--KLQDLDVIKVRCGSQ 613
Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
+ + DG+V+ WG +LG G P + ++G +VA G H L L
Sbjct: 614 FSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 670
Score = 198 (74.8 bits), Expect = 1.6e-17, Sum P(3) = 1.6e-17
Identities = 52/173 (30%), Positives = 80/173 (46%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
G V +A GG HSA +T AG L T+G G YG+ G ++D+L P V +L G ++ +A
Sbjct: 4035 GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIA 4094
Query: 359 AGLW--HTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGAR 416
G T+C++ D V++ +P +D SL + V CG++
Sbjct: 4095 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQ 4152
Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWH 468
+ + G V+ WG Y +LG G P QV ++G +A G H
Sbjct: 4153 FSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4205
Score = 187 (70.9 bits), Expect = 2.1e-15, Sum P(5) = 2.1e-15
Identities = 46/170 (27%), Positives = 82/170 (48%)
Query: 301 YVKGIAC--GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
++K +A GG+H ++ G + ++G G+ G G+ P + SL GI++ VA
Sbjct: 3983 FIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVA 4042
Query: 359 AGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGA--R 416
AG H+ C+++ GD+Y + + P+L++A L+ ++CG+
Sbjct: 4043 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA--LQGHRVIDIACGSGDA 4100
Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
T + DD V+ WG YG+LG G +P ++ ++ G V CG
Sbjct: 4101 QTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECG 4150
Score = 180 (68.4 bits), Expect = 7.2e-15, Sum P(4) = 7.2e-15
Identities = 56/203 (27%), Positives = 87/203 (42%)
Query: 274 SYGKDRSAALSRGSVNSE-GPGF--RVPGNYVKGIACGG--RHSAVITDAGALLTFGWGL 328
++GK R L + P + G+ V IACG + +TD + ++G G
Sbjct: 4059 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 4118
Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXX 388
YG+ G+G +D P + SL G+ + V G ++ ++ G VY
Sbjct: 4119 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS 4178
Query: 389 DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNI 448
D PR + L+ +++ G+ H +DG+V+ WG N GQLG G
Sbjct: 4179 DDHVRRPRQVQG--LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR 4236
Query: 449 PSQVT-IEGCVPRNVACGWWHTL 470
P V ++G VACG HTL
Sbjct: 4237 PRLVAALQGKKVNRVACGSAHTL 4259
Score = 168 (64.2 bits), Expect = 8.2e-13, Sum P(3) = 8.2e-13
Identities = 54/208 (25%), Positives = 92/208 (44%)
Query: 270 CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIAC--GGRHSAVITDAGALLTFGWG 327
C E++ G+ +S G+V + VK +A GGRH+ +T G + ++G G
Sbjct: 2960 CGEATNGR-LGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3018
Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXX 387
G+ G S + P + +L +I +A G H+ ++S G++Y
Sbjct: 3019 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHG 3078
Query: 388 XDQAETLPRLLDAPSLENVHSKSVSCGAR--HTAVIADDGKVFCWGWNKYGQLGLGDVID 445
+ + P+++ L V+CG+R T + D+G VF WG +G+LG G
Sbjct: 3079 DNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEG 3136
Query: 446 RNIPSQVT-IEGCVPRNVACGWWHTLLL 472
NIP + + G + CG +L L
Sbjct: 3137 CNIPQNIERLNGQGVCQIECGAQFSLAL 3164
Score = 166 (63.5 bits), Expect = 5.3e-12, Sum P(4) = 5.3e-12
Identities = 46/175 (26%), Positives = 79/175 (45%)
Query: 299 GNYVKGIACGGR--HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG 356
G+ V +ACG R + +TD G + ++G G +G+ G+G ++ P + L G +
Sbjct: 3094 GHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQ 3153
Query: 357 VAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGAR 416
+ G ++ ++ G V+ D P++++ L V+ GA
Sbjct: 3154 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG--LRGKKIVHVAVGAL 3211
Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
H + D G+V+ WG N +GQ G G P+ V +EG VACG H++
Sbjct: 3212 HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3266
Score = 156 (60.0 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 49/202 (24%), Positives = 86/202 (42%)
Query: 274 SYGKDRSAALSRGSVNSEGPGFRVPGNYVKG-----IACGG--RHSAVITDAGALLTFGW 326
++G+ L GS E V G +KG +ACG + +T+ G + ++G
Sbjct: 520 TWGRGNYGRLGHGSSEDEAIPMLVAG--LKGLKVIDVACGSGDAQTLAVTENGQVWSWGD 577
Query: 327 GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXX 386
G YG+ G+G +D +P + L + + V G +I ++ DG VY+
Sbjct: 578 GDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH 637
Query: 387 XXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR 446
++ P+LL+ L+ V+ G+ H + +D +V WG N Q D +
Sbjct: 638 GTEEHVRYPKLLEG--LQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRV 693
Query: 447 NIPSQVTIEGCVPRNV---ACG 465
P + G +++ ACG
Sbjct: 694 TKPEPTALPGLDTKHIVGIACG 715
Score = 139 (54.0 bits), Expect = 7.2e-10, Sum P(5) = 7.2e-10
Identities = 45/150 (30%), Positives = 61/150 (40%)
Query: 274 SYGKDRSAALSRGSVNSEGPGF-----RVPGNYVKGIACGGRHSAVITDAGALLTFGWGL 328
S+G L RG SEG R+ G V I CG + S +T +G + T+G G
Sbjct: 3120 SWGDGDFGKLGRGG--SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3177
Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXX 388
Y + G GS P V L G +I VA G H + ++ G VYA
Sbjct: 3178 YFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 3237
Query: 389 DQAETLPRLLDAPSLENVHSKSVSCGARHT 418
P L+ LE V+CG+ H+
Sbjct: 3238 TTVNRKPTLVQG--LEGQKITRVACGSSHS 3265
Score = 138 (53.6 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 39/149 (26%), Positives = 68/149 (45%)
Query: 300 NYVKGIA-CGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ----I 354
N VK A G H + G + ++G G G+ G G T P +S+ G Q +
Sbjct: 440 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 499
Query: 355 EGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCG 414
+A G ++ I+++G++Y + E +P L+ L+ + V+CG
Sbjct: 500 VHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV--AGLKGLKVIDVACG 557
Query: 415 A--RHTAVIADDGKVFCWGWNKYGQLGLG 441
+ T + ++G+V+ WG YG+LG G
Sbjct: 558 SGDAQTLAVTENGQVWSWGDGDYGKLGRG 586
Score = 118 (46.6 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
Identities = 41/154 (26%), Positives = 65/154 (42%)
Query: 324 FGWGLYG--QCGQGSTDDELS-PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXX 380
F WGL Q G G ++ P+ +L + + VA G ++ +G VY+
Sbjct: 2906 FVWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEAT 2964
Query: 381 XXXXXXXXDQAET-LPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG 439
+PR + A S V +V G RH + DGKVF WG G+LG
Sbjct: 2965 NGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLG 3024
Query: 440 LGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLL 472
++ + P + ++ R++ACG H+ L
Sbjct: 3025 HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3058
Score = 117 (46.2 bits), Expect = 1.2e-07, Sum P(5) = 1.2e-07
Identities = 40/163 (24%), Positives = 81/163 (49%)
Query: 315 ITDAGALLTFGWGLY--GQCG--QGSTDDELSP-NCVSSLLGIQIEGVAAGLWHTICISS 369
++ G+ +GWG GQ G +G+ +P +++L +Q+ G L+ +++
Sbjct: 3891 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLF---AVTA 3947
Query: 370 DGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSK--SVSCGARHTAVIADDGKV 427
DG +YA ++ + P LL+ S+++V K +V+ G +H ++ +G+V
Sbjct: 3948 DGKLYATGYGAGGRLGIGGTESVSTPTLLE--SIQHVFIKKVAVNSGGKHCLALSSEGEV 4005
Query: 428 FCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
+ WG + G+LG G+ + P + ++ G +VA G H+
Sbjct: 4006 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4048
Score = 111 (44.1 bits), Expect = 1.6e-17, Sum P(3) = 1.6e-17
Identities = 28/77 (36%), Positives = 38/77 (49%)
Query: 49 VCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAG 106
VC CG F++A++ S + TWG D + S H P+ IV A G
Sbjct: 3151 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVG 3209
Query: 107 WAHCVAVTEGGEVYTWG 123
HC+AVT+ G+VY WG
Sbjct: 3210 ALHCLAVTDSGQVYAWG 3226
Score = 106 (42.4 bits), Expect = 1.9e-16, Sum P(4) = 1.9e-16
Identities = 24/78 (30%), Positives = 41/78 (52%)
Query: 48 DVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAA 105
DV CG F++A++ ++ +WG D+ + T +H P+ ++ AA
Sbjct: 604 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 662
Query: 106 GWAHCVAVTEGGEVYTWG 123
G HC+A+TE EV++WG
Sbjct: 663 GSTHCLALTEDSEVHSWG 680
Score = 101 (40.6 bits), Expect = 6.7e-06, Sum P(5) = 6.7e-06
Identities = 31/97 (31%), Positives = 45/97 (46%)
Query: 274 SYGKDRSAALSRGS-VNSEGP----GFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL 328
++GK L GS V+ P G R G + +A G H +TD+G + +G
Sbjct: 3172 TWGKGDYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDND 3229
Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTI 365
+GQ G G+T P V L G +I VA G H++
Sbjct: 3230 HGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3266
Score = 99 (39.9 bits), Expect = 4.3e-06, Sum P(4) = 4.3e-06
Identities = 25/71 (35%), Positives = 36/71 (50%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
G V IA G H T+ G + T+G GQ G G+T+ P V++L G ++ VA
Sbjct: 4193 GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVA 4252
Query: 359 AGLWHTICISS 369
G HT+ S+
Sbjct: 4253 CGSAHTLAWST 4263
Score = 97 (39.2 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 25/77 (32%), Positives = 36/77 (46%)
Query: 50 CGGGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHG-EIPEPFPLPTEASIVKAAAG 106
CG G + ++D + +WG D LG+ G G ++P T +VK G
Sbjct: 4095 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG----GSDGCKVPMKIDSLTGLGVVKVECG 4150
Query: 107 WAHCVAVTEGGEVYTWG 123
VA+T+ G VYTWG
Sbjct: 4151 SQFSVALTKSGAVYTWG 4167
Score = 93 (37.8 bits), Expect = 6.2e-09, Sum P(4) = 6.2e-09
Identities = 23/80 (28%), Positives = 42/80 (52%)
Query: 48 DV-CGGGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHG-EIPEPFPLPTEASIVKA 103
DV CG G +A++++ ++ +WG D LG+ G G + P+ + ++K
Sbjct: 553 DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG----GSDGCKTPKLIEKLQDLDVIKV 608
Query: 104 AAGWAHCVAVTEGGEVYTWG 123
G +A+T+ G+VY+WG
Sbjct: 609 RCGSQFSIALTKDGQVYSWG 628
Score = 91 (37.1 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 25/77 (32%), Positives = 37/77 (48%)
Query: 49 VCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASI--VKAAAG 106
V GG +A+S ++ +WG +D G+ + G P + + I V AAG
Sbjct: 3989 VNSGG-KHCLALSSEGEVYSWGEAED-GK--LGHGNRSPCDRPRVIESLRGIEVVDVAAG 4044
Query: 107 WAHCVAVTEGGEVYTWG 123
AH VT G++YTWG
Sbjct: 4045 GAHSACVTAAGDLYTWG 4061
Score = 89 (36.4 bits), Expect = 1.9e-08, Sum P(4) = 1.9e-08
Identities = 31/92 (33%), Positives = 43/92 (46%)
Query: 49 VCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWA 108
V GG A A++ K+ +WG DD G+ S + + P I A G +
Sbjct: 2996 VHSGG-RHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3053
Query: 109 HCVAVTEGGEVYTWGWKECVPSGRV-FGDLST 139
H A+T GE+YTWG E GR+ GD +T
Sbjct: 3054 HSAALTSSGELYTWGLGEY---GRLGHGDNTT 3082
Score = 78 (32.5 bits), Expect = 3.2e-07, Sum P(5) = 3.2e-07
Identities = 32/117 (27%), Positives = 50/117 (42%)
Query: 14 VFMWGYLPGALPQRS---PILSPLVVRLPLTVGSAWRDVCGGGCG--FAMAISDSRKLIT 68
V+ WG G P+ P V+ + A + V CG ++ AI+ +L T
Sbjct: 462 VYSWGCGDGGRLGHGDTVPLEEPKVISA-FSGKQAGKHVVHIACGSTYSAAITAEGELYT 520
Query: 69 WGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGW--AHCVAVTEGGEVYTWG 123
WG + G+ S + IP ++ A G A +AVTE G+V++WG
Sbjct: 521 WGR-GNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 576
Score = 76 (31.8 bits), Expect = 6.0e-14, Sum P(3) = 6.0e-14
Identities = 20/75 (26%), Positives = 33/75 (44%)
Query: 50 CGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHG-EIPEPFPLPTEASIVKAAAGWA 108
CG +A++D + +WG D G+ G G IP+ + + G
Sbjct: 3102 CGSRDAQTLALTDEGLVFSWGD-GDFGK-LGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 3159
Query: 109 HCVAVTEGGEVYTWG 123
+A+T+ G V+TWG
Sbjct: 3160 FSLALTKSGVVWTWG 3174
Score = 69 (29.3 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 18/69 (26%), Positives = 32/69 (46%)
Query: 58 MAISDSRKLITWGSTDD--LGQSYVTSGKHGEIPEPFPLPTEAS-IVKAAAGWAHCVAVT 114
+A++ + ++ +WG D LG + ++ F +V A G + A+T
Sbjct: 454 LALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT 513
Query: 115 EGGEVYTWG 123
GE+YTWG
Sbjct: 514 AEGELYTWG 522
Score = 68 (29.0 bits), Expect = 1.5e-12, Sum P(4) = 1.5e-12
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 101 VKAAAGWAHCVAVTEGGEVYTWGWKE 126
V +G HC+A++ GEVY+WG E
Sbjct: 3987 VAVNSGGKHCLALSSEGEVYSWGEAE 4012
Score = 65 (27.9 bits), Expect = 4.2e-06, Sum P(4) = 4.2e-06
Identities = 23/77 (29%), Positives = 37/77 (48%)
Query: 65 KLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGW 124
K+ WG +D Q G ++P + ++V+ A G AVT G+VY+ G
Sbjct: 2904 KVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCG- 2961
Query: 125 KECVPSGRVFGDLSTGT 141
E +GR+ +S+GT
Sbjct: 2962 -EAT-NGRLGLGMSSGT 2976
Score = 62 (26.9 bits), Expect = 8.1e-06, Sum P(4) = 8.1e-06
Identities = 21/76 (27%), Positives = 36/76 (47%)
Query: 52 GGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEAS-IVKAAA---GW 107
GG A++ K+ + G + G+ + G +P P + +S +VK A G
Sbjct: 2943 GGSKSLFAVTVEGKVYSCGEATN-GRLGLGMSS-GTVPIPRQITALSSYVVKKVAVHSGG 3000
Query: 108 AHCVAVTEGGEVYTWG 123
H A+T G+V++WG
Sbjct: 3001 RHATALTVDGKVFSWG 3016
Score = 60 (26.2 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 18/41 (43%), Positives = 23/41 (56%)
Query: 99 SIVKAAA--GWAHCVAVTEGGEVYTWGWKECVPSGRV-FGD 136
+IVK AA H +A+ GEVY+WG C GR+ GD
Sbjct: 440 NIVKIAAHSDGHHYLALAATGEVYSWG---CGDGGRLGHGD 477
Score = 53 (23.7 bits), Expect = 6.2e-09, Sum P(4) = 6.2e-09
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSD 238
G E +P L+ G ++ VAAG H LAL++
Sbjct: 638 GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 672
Score = 52 (23.4 bits), Expect = 2.1e-15, Sum P(5) = 2.1e-15
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGR--HTLALSD 238
GD P +V + G R+ VA G R TLAL+D
Sbjct: 3078 GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3114
Score = 50 (22.7 bits), Expect = 2.6e-11, Sum P(3) = 2.6e-11
Identities = 17/62 (27%), Positives = 27/62 (43%)
Query: 53 GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
G +A++DS ++ WG D Q T+ + + P I + A G +H VA
Sbjct: 3209 GALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK-PTLVQGLEGQKITRVACGSSHSVA 3267
Query: 113 VT 114
T
Sbjct: 3268 WT 3269
Score = 50 (22.7 bits), Expect = 0.00014, Sum P(5) = 0.00014
Identities = 21/67 (31%), Positives = 29/67 (43%)
Query: 48 DVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLP--TEASIVKAAA 105
DV G +A+++ ++ +WGS D Q + T PEP LP IV A
Sbjct: 659 DVAAGST-HCLALTEDSEVHSWGSNDQC-QHFDTL--RVTKPEPTALPGLDTKHIVGIAC 714
Query: 106 GWAHCVA 112
G A A
Sbjct: 715 GPAQSFA 721
Score = 48 (22.0 bits), Expect = 1.6e-17, Sum P(3) = 1.6e-17
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 198 AESSSSGDENLSAF--PCLVTLNPGVRIATVAAGGRHTLALS 237
AE G N S P ++ G+ + VAAGG H+ ++
Sbjct: 4011 AEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT 4052
Score = 47 (21.6 bits), Expect = 1.9e-16, Sum P(4) = 1.9e-16
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALS 237
G E++S P L+ V I VA +GG+H LALS
Sbjct: 3966 GTESVST-PTLLESIQHVFIKKVAVNSGGKHCLALS 4000
Score = 47 (21.6 bits), Expect = 5.3e-11, Sum P(3) = 5.3e-11
Identities = 16/69 (23%), Positives = 27/69 (39%)
Query: 56 FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTE 115
+ ++ S + WG + GQ G ++P P V+ G AVT
Sbjct: 3889 WTLSAGGSGTIYGWGH-NHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTA 3947
Query: 116 GGEVYTWGW 124
G++Y G+
Sbjct: 3948 DGKLYATGY 3956
Score = 43 (20.2 bits), Expect = 4.8e-16, Sum P(4) = 4.8e-16
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 220 GVRIATVAAGGRHTLALSD 238
G +I VA G H LA++D
Sbjct: 3200 GKKIVHVAVGALHCLAVTD 3218
Score = 43 (20.2 bits), Expect = 1.3e-05, Sum P(4) = 1.3e-05
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 202 SSGDENLSAFPCLVTLNPGVRIATVAAGG--RHTLALSD 238
SS DE A P LV G+++ VA G TLA+++
Sbjct: 533 SSEDE---AIPMLVAGLKGLKVIDVACGSGDAQTLAVTE 568
Score = 40 (19.1 bits), Expect = 1.9e-16, Sum P(4) = 1.9e-16
Identities = 10/35 (28%), Positives = 15/35 (42%)
Query: 123 GWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTE 157
GW+ +P G G+ T D D+ + L E
Sbjct: 1639 GWQRLIPEGIDIGEPLTDCLRDVDLIPPFNRMLLE 1673
Score = 39 (18.8 bits), Expect = 2.1e-15, Sum P(5) = 2.1e-15
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 299 GNYVKGIACGGRHSAVIT 316
G + +ACG HS T
Sbjct: 3252 GQKITRVACGSSHSVAWT 3269
Score = 39 (18.8 bits), Expect = 5.3e-12, Sum P(4) = 5.3e-12
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 221 VRIATVAAGGRHTLALS 237
V+ V +GGRH AL+
Sbjct: 2991 VKKVAVHSGGRHATALT 3007
Score = 38 (18.4 bits), Expect = 1.5e-12, Sum P(4) = 1.5e-12
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 68 TWGSTDDLGQSYVTSGKHGE 87
T+G ++ GQS V G+ G+
Sbjct: 2690 TFGRINEPGQSAVFCGRSGK 2709
Score = 38 (18.4 bits), Expect = 7.2e-10, Sum P(5) = 7.2e-10
Identities = 6/9 (66%), Positives = 6/9 (66%)
Query: 424 DGKVFCWGW 432
DG V WGW
Sbjct: 3639 DGSVNGWGW 3647
>MGI|MGI:103234 [details] [associations]
symbol:Herc2 "hect (homologous to the E6-AP (UBE3A) carboxyl
terminus) domain and RCC1 (CHC1)-like domain (RLD) 2" species:10090
"Mus musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IBA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;IBA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0006281
"DNA repair" evidence=ISO] [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=ISO] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016874
"ligase activity" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=ISO] [GO:0032183 "SUMO binding" evidence=ISO] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IBA] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS00191 PROSITE:PS01357 PROSITE:PS50082
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS50294
PROSITE:PS51416 SMART:SM00119 SMART:SM00291 UniPathway:UPA00143
MGI:MGI:103234 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005814 PROSITE:PS00678 GO:GO:0005743 GO:GO:0046872
GO:GO:0008270 GO:GO:0006281 GO:GO:0007283 GO:GO:0020037
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 GO:GO:0042787 GO:GO:0032183 Gene3D:2.30.30.30
InterPro:IPR021097 InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00700000104208 CTD:8924 KO:K10595
OMA:QLAFTRD HOVERGEN:HBG081598 OrthoDB:EOG41C6V9 InterPro:IPR006624
SMART:SM00706 EMBL:AF061529 EMBL:AF071173 EMBL:AC102121
EMBL:AC102150 EMBL:AK141515 EMBL:AK148361 EMBL:AK161826
EMBL:AK162270 EMBL:AK162708 EMBL:AK220338 EMBL:BC044667
EMBL:BC054829 IPI:IPI00309574 IPI:IPI00314989 RefSeq:NP_034548.2
UniGene:Mm.20929 ProteinModelPortal:Q4U2R1 SMR:Q4U2R1 STRING:Q4U2R1
PhosphoSite:Q4U2R1 PaxDb:Q4U2R1 PRIDE:Q4U2R1
Ensembl:ENSMUST00000076226 Ensembl:ENSMUST00000164095 GeneID:15204
KEGG:mmu:15204 UCSC:uc009hdv.1 InParanoid:Q4U2R1 ChiTaRS:HERC2
NextBio:287753 Bgee:Q4U2R1 Genevestigator:Q4U2R1
GermOnline:ENSMUSG00000030451 Uniprot:Q4U2R1
Length = 4836
Score = 208 (78.3 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 54/177 (30%), Positives = 87/177 (49%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
G +V IACG +SA IT G L T+G G YG+ G GS++DE P V+ L G+++ VA
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 610
Query: 359 AGLW--HTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGAR 416
G T+ ++ +G V++ P+L++ L+++ V CG++
Sbjct: 611 CGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE--KLQDLDVIKVRCGSQ 668
Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
+ + DG+V+ WG +LG G P + ++G +VA G H L L
Sbjct: 669 FSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 725
Score = 198 (74.8 bits), Expect = 1.7e-17, Sum P(3) = 1.7e-17
Identities = 52/173 (30%), Positives = 80/173 (46%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
G V +A GG HSA +T AG L T+G G YG+ G ++D+L P V +L G ++ +A
Sbjct: 4092 GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIA 4151
Query: 359 AGLW--HTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGAR 416
G T+C++ D V++ +P +D SL + V CG++
Sbjct: 4152 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQ 4209
Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWH 468
+ + G V+ WG Y +LG G P QV ++G +A G H
Sbjct: 4210 FSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4262
Score = 187 (70.9 bits), Expect = 2.3e-15, Sum P(5) = 2.3e-15
Identities = 46/170 (27%), Positives = 82/170 (48%)
Query: 301 YVKGIAC--GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
++K +A GG+H ++ G + ++G G+ G G+ P + SL GI++ VA
Sbjct: 4040 FIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVA 4099
Query: 359 AGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGA--R 416
AG H+ C+++ GD+Y + + P+L++A L+ ++CG+
Sbjct: 4100 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA--LQGHRVIDIACGSGDA 4157
Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
T + DD V+ WG YG+LG G +P ++ ++ G V CG
Sbjct: 4158 QTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECG 4207
Score = 180 (68.4 bits), Expect = 7.6e-15, Sum P(4) = 7.6e-15
Identities = 56/203 (27%), Positives = 87/203 (42%)
Query: 274 SYGKDRSAALSRGSVNSE-GPGF--RVPGNYVKGIACGG--RHSAVITDAGALLTFGWGL 328
++GK R L + P + G+ V IACG + +TD + ++G G
Sbjct: 4116 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 4175
Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXX 388
YG+ G+G +D P + SL G+ + V G ++ ++ G VY
Sbjct: 4176 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS 4235
Query: 389 DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNI 448
D PR + L+ +++ G+ H +DG+V+ WG N GQLG G
Sbjct: 4236 DDHVRRPRQVQG--LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR 4293
Query: 449 PSQVT-IEGCVPRNVACGWWHTL 470
P V ++G VACG HTL
Sbjct: 4294 PRLVAALQGKKVNRVACGSAHTL 4316
Score = 168 (64.2 bits), Expect = 8.5e-13, Sum P(3) = 8.5e-13
Identities = 54/208 (25%), Positives = 92/208 (44%)
Query: 270 CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIAC--GGRHSAVITDAGALLTFGWG 327
C E++ G+ +S G+V + VK +A GGRH+ +T G + ++G G
Sbjct: 3017 CGEATNGR-LGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075
Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXX 387
G+ G S + P + +L +I +A G H+ ++S G++Y
Sbjct: 3076 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHG 3135
Query: 388 XDQAETLPRLLDAPSLENVHSKSVSCGAR--HTAVIADDGKVFCWGWNKYGQLGLGDVID 445
+ + P+++ L V+CG+R T + D+G VF WG +G+LG G
Sbjct: 3136 DNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEG 3193
Query: 446 RNIPSQVT-IEGCVPRNVACGWWHTLLL 472
NIP + + G + CG +L L
Sbjct: 3194 CNIPQNIERLNGQGVCQIECGAQFSLAL 3221
Score = 166 (63.5 bits), Expect = 5.6e-12, Sum P(4) = 5.6e-12
Identities = 46/175 (26%), Positives = 79/175 (45%)
Query: 299 GNYVKGIACGGR--HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG 356
G+ V +ACG R + +TD G + ++G G +G+ G+G ++ P + L G +
Sbjct: 3151 GHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQ 3210
Query: 357 VAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGAR 416
+ G ++ ++ G V+ D P++++ L V+ GA
Sbjct: 3211 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG--LRGKKIVHVAVGAL 3268
Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
H + D G+V+ WG N +GQ G G P+ V +EG VACG H++
Sbjct: 3269 HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3323
Score = 156 (60.0 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 49/202 (24%), Positives = 86/202 (42%)
Query: 274 SYGKDRSAALSRGSVNSEGPGFRVPGNYVKG-----IACGG--RHSAVITDAGALLTFGW 326
++G+ L GS E V G +KG +ACG + +T+ G + ++G
Sbjct: 575 TWGRGNYGRLGHGSSEDEAIPMLVAG--LKGLKVIDVACGSGDAQTLAVTENGQVWSWGD 632
Query: 327 GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXX 386
G YG+ G+G +D +P + L + + V G +I ++ DG VY+
Sbjct: 633 GDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGH 692
Query: 387 XXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR 446
++ P+LL+ L+ V+ G+ H + +D +V WG N Q D +
Sbjct: 693 GTEEHVRYPKLLEG--LQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRV 748
Query: 447 NIPSQVTIEGCVPRNV---ACG 465
P + G +++ ACG
Sbjct: 749 TKPEPTALPGLDSKHIVGIACG 770
Score = 139 (54.0 bits), Expect = 7.6e-10, Sum P(5) = 7.6e-10
Identities = 45/150 (30%), Positives = 61/150 (40%)
Query: 274 SYGKDRSAALSRGSVNSEGPGF-----RVPGNYVKGIACGGRHSAVITDAGALLTFGWGL 328
S+G L RG SEG R+ G V I CG + S +T +G + T+G G
Sbjct: 3177 SWGDGDFGKLGRGG--SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3234
Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXX 388
Y + G GS P V L G +I VA G H + ++ G VYA
Sbjct: 3235 YFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 3294
Query: 389 DQAETLPRLLDAPSLENVHSKSVSCGARHT 418
P L+ LE V+CG+ H+
Sbjct: 3295 TTVNRKPTLVQG--LEGQKITRVACGSSHS 3322
Score = 138 (53.6 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 39/149 (26%), Positives = 68/149 (45%)
Query: 300 NYVKGIA-CGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ----I 354
N VK A G H + G + ++G G G+ G G T P +S+ G Q +
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 554
Query: 355 EGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCG 414
+A G ++ I+++G++Y + E +P L+ L+ + V+CG
Sbjct: 555 VHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV--AGLKGLKVIDVACG 612
Query: 415 A--RHTAVIADDGKVFCWGWNKYGQLGLG 441
+ T + ++G+V+ WG YG+LG G
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG 641
Score = 118 (46.6 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 41/154 (26%), Positives = 65/154 (42%)
Query: 324 FGWGLYG--QCGQGSTDDELS-PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXX 380
F WGL Q G G ++ P+ +L + + VA G ++ +G VY+
Sbjct: 2963 FVWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEAT 3021
Query: 381 XXXXXXXXDQAET-LPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG 439
+PR + A S V +V G RH + DGKVF WG G+LG
Sbjct: 3022 NGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLG 3081
Query: 440 LGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLL 472
++ + P + ++ R++ACG H+ L
Sbjct: 3082 HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3115
Score = 117 (46.2 bits), Expect = 1.3e-07, Sum P(5) = 1.3e-07
Identities = 40/163 (24%), Positives = 81/163 (49%)
Query: 315 ITDAGALLTFGWGLY--GQCG--QGSTDDELSP-NCVSSLLGIQIEGVAAGLWHTICISS 369
++ G+ +GWG GQ G +G+ +P +++L +Q+ G L+ +++
Sbjct: 3948 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLF---AVTA 4004
Query: 370 DGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSK--SVSCGARHTAVIADDGKV 427
DG +YA ++ + P LL+ S+++V K +V+ G +H ++ +G+V
Sbjct: 4005 DGKLYATGYGAGGRLGIGGTESVSTPTLLE--SIQHVFIKKVAVNSGGKHCLALSSEGEV 4062
Query: 428 FCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
+ WG + G+LG G+ + P + ++ G +VA G H+
Sbjct: 4063 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4105
Score = 111 (44.1 bits), Expect = 1.7e-17, Sum P(3) = 1.7e-17
Identities = 28/77 (36%), Positives = 38/77 (49%)
Query: 49 VCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAG 106
VC CG F++A++ S + TWG D + S H P+ IV A G
Sbjct: 3208 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVG 3266
Query: 107 WAHCVAVTEGGEVYTWG 123
HC+AVT+ G+VY WG
Sbjct: 3267 ALHCLAVTDSGQVYAWG 3283
Score = 106 (42.4 bits), Expect = 2.0e-16, Sum P(4) = 2.0e-16
Identities = 24/78 (30%), Positives = 41/78 (52%)
Query: 48 DVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAA 105
DV CG F++A++ ++ +WG D+ + T +H P+ ++ AA
Sbjct: 659 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 717
Query: 106 GWAHCVAVTEGGEVYTWG 123
G HC+A+TE EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735
Score = 101 (40.6 bits), Expect = 7.1e-06, Sum P(5) = 7.1e-06
Identities = 31/97 (31%), Positives = 45/97 (46%)
Query: 274 SYGKDRSAALSRGS-VNSEGP----GFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL 328
++GK L GS V+ P G R G + +A G H +TD+G + +G
Sbjct: 3229 TWGKGDYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDND 3286
Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTI 365
+GQ G G+T P V L G +I VA G H++
Sbjct: 3287 HGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3323
Score = 99 (39.9 bits), Expect = 4.5e-06, Sum P(4) = 4.5e-06
Identities = 25/71 (35%), Positives = 36/71 (50%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
G V IA G H T+ G + T+G GQ G G+T+ P V++L G ++ VA
Sbjct: 4250 GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVA 4309
Query: 359 AGLWHTICISS 369
G HT+ S+
Sbjct: 4310 CGSAHTLAWST 4320
Score = 97 (39.2 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 25/77 (32%), Positives = 36/77 (46%)
Query: 50 CGGGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHG-EIPEPFPLPTEASIVKAAAG 106
CG G + ++D + +WG D LG+ G G ++P T +VK G
Sbjct: 4152 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG----GSDGCKVPMKIDSLTGLGVVKVECG 4207
Query: 107 WAHCVAVTEGGEVYTWG 123
VA+T+ G VYTWG
Sbjct: 4208 SQFSVALTKSGAVYTWG 4224
Score = 93 (37.8 bits), Expect = 6.5e-09, Sum P(4) = 6.5e-09
Identities = 23/80 (28%), Positives = 42/80 (52%)
Query: 48 DV-CGGGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHG-EIPEPFPLPTEASIVKA 103
DV CG G +A++++ ++ +WG D LG+ G G + P+ + ++K
Sbjct: 608 DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG----GSDGCKTPKLIEKLQDLDVIKV 663
Query: 104 AAGWAHCVAVTEGGEVYTWG 123
G +A+T+ G+VY+WG
Sbjct: 664 RCGSQFSIALTKDGQVYSWG 683
Score = 91 (37.1 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 25/77 (32%), Positives = 37/77 (48%)
Query: 49 VCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASI--VKAAAG 106
V GG +A+S ++ +WG +D G+ + G P + + I V AAG
Sbjct: 4046 VNSGG-KHCLALSSEGEVYSWGEAED-GK--LGHGNRSPCDRPRVIESLRGIEVVDVAAG 4101
Query: 107 WAHCVAVTEGGEVYTWG 123
AH VT G++YTWG
Sbjct: 4102 GAHSACVTAAGDLYTWG 4118
Score = 89 (36.4 bits), Expect = 2.0e-08, Sum P(4) = 2.0e-08
Identities = 31/92 (33%), Positives = 43/92 (46%)
Query: 49 VCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWA 108
V GG A A++ K+ +WG DD G+ S + + P I A G +
Sbjct: 3053 VHSGG-RHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3110
Query: 109 HCVAVTEGGEVYTWGWKECVPSGRV-FGDLST 139
H A+T GE+YTWG E GR+ GD +T
Sbjct: 3111 HSAALTSSGELYTWGLGEY---GRLGHGDNTT 3139
Score = 78 (32.5 bits), Expect = 3.4e-07, Sum P(5) = 3.4e-07
Identities = 32/117 (27%), Positives = 50/117 (42%)
Query: 14 VFMWGYLPGALPQRS---PILSPLVVRLPLTVGSAWRDVCGGGCG--FAMAISDSRKLIT 68
V+ WG G P+ P V+ + A + V CG ++ AI+ +L T
Sbjct: 517 VYSWGCGDGGRLGHGDTVPLEEPKVISA-FSGKQAGKHVVHIACGSTYSAAITAEGELYT 575
Query: 69 WGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGW--AHCVAVTEGGEVYTWG 123
WG + G+ S + IP ++ A G A +AVTE G+V++WG
Sbjct: 576 WGR-GNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 631
Score = 76 (31.8 bits), Expect = 6.2e-14, Sum P(3) = 6.2e-14
Identities = 20/75 (26%), Positives = 33/75 (44%)
Query: 50 CGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHG-EIPEPFPLPTEASIVKAAAGWA 108
CG +A++D + +WG D G+ G G IP+ + + G
Sbjct: 3159 CGSRDAQTLALTDEGLVFSWGD-GDFGK-LGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 3216
Query: 109 HCVAVTEGGEVYTWG 123
+A+T+ G V+TWG
Sbjct: 3217 FSLALTKSGVVWTWG 3231
Score = 69 (29.3 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 18/69 (26%), Positives = 32/69 (46%)
Query: 58 MAISDSRKLITWGSTDD--LGQSYVTSGKHGEIPEPFPLPTEAS-IVKAAAGWAHCVAVT 114
+A++ + ++ +WG D LG + ++ F +V A G + A+T
Sbjct: 509 LALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT 568
Query: 115 EGGEVYTWG 123
GE+YTWG
Sbjct: 569 AEGELYTWG 577
Score = 68 (29.0 bits), Expect = 1.6e-12, Sum P(4) = 1.6e-12
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 101 VKAAAGWAHCVAVTEGGEVYTWGWKE 126
V +G HC+A++ GEVY+WG E
Sbjct: 4044 VAVNSGGKHCLALSSEGEVYSWGEAE 4069
Score = 65 (27.9 bits), Expect = 4.4e-06, Sum P(4) = 4.4e-06
Identities = 23/77 (29%), Positives = 37/77 (48%)
Query: 65 KLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGW 124
K+ WG +D Q G ++P + ++V+ A G AVT G+VY+ G
Sbjct: 2961 KVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCG- 3018
Query: 125 KECVPSGRVFGDLSTGT 141
E +GR+ +S+GT
Sbjct: 3019 -EAT-NGRLGLGMSSGT 3033
Score = 62 (26.9 bits), Expect = 8.5e-06, Sum P(4) = 8.5e-06
Identities = 21/76 (27%), Positives = 36/76 (47%)
Query: 52 GGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEAS-IVKAAA---GW 107
GG A++ K+ + G + G+ + G +P P + +S +VK A G
Sbjct: 3000 GGSKSLFAVTVEGKVYSCGEATN-GRLGLGMSS-GTVPIPRQITALSSYVVKKVAVHSGG 3057
Query: 108 AHCVAVTEGGEVYTWG 123
H A+T G+V++WG
Sbjct: 3058 RHATALTVDGKVFSWG 3073
Score = 60 (26.2 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 18/41 (43%), Positives = 23/41 (56%)
Query: 99 SIVKAAA--GWAHCVAVTEGGEVYTWGWKECVPSGRV-FGD 136
+IVK AA H +A+ GEVY+WG C GR+ GD
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWG---CGDGGRLGHGD 532
Score = 53 (23.7 bits), Expect = 6.5e-09, Sum P(4) = 6.5e-09
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSD 238
G E +P L+ G ++ VAAG H LAL++
Sbjct: 693 GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727
Score = 52 (23.4 bits), Expect = 2.3e-15, Sum P(5) = 2.3e-15
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGR--HTLALSD 238
GD P +V + G R+ VA G R TLAL+D
Sbjct: 3135 GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3171
Score = 51 (23.0 bits), Expect = 0.00012, Sum P(5) = 0.00012
Identities = 22/67 (32%), Positives = 30/67 (44%)
Query: 48 DVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEAS--IVKAAA 105
DV G +A+++ ++ +WGS D Q + T PEP LP S IV A
Sbjct: 714 DVAAGST-HCLALTEDSEVHSWGSNDQC-QHFDTL--RVTKPEPTALPGLDSKHIVGIAC 769
Query: 106 GWAHCVA 112
G A A
Sbjct: 770 GPAQSFA 776
Score = 50 (22.7 bits), Expect = 2.7e-11, Sum P(3) = 2.7e-11
Identities = 17/62 (27%), Positives = 27/62 (43%)
Query: 53 GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
G +A++DS ++ WG D Q T+ + + P I + A G +H VA
Sbjct: 3266 GALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK-PTLVQGLEGQKITRVACGSSHSVA 3324
Query: 113 VT 114
T
Sbjct: 3325 WT 3326
Score = 48 (22.0 bits), Expect = 1.7e-17, Sum P(3) = 1.7e-17
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 198 AESSSSGDENLSAF--PCLVTLNPGVRIATVAAGGRHTLALS 237
AE G N S P ++ G+ + VAAGG H+ ++
Sbjct: 4068 AEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT 4109
Score = 47 (21.6 bits), Expect = 2.0e-16, Sum P(4) = 2.0e-16
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALS 237
G E++S P L+ V I VA +GG+H LALS
Sbjct: 4023 GTESVST-PTLLESIQHVFIKKVAVNSGGKHCLALS 4057
Score = 47 (21.6 bits), Expect = 5.5e-11, Sum P(3) = 5.5e-11
Identities = 16/69 (23%), Positives = 27/69 (39%)
Query: 56 FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTE 115
+ ++ S + WG + GQ G ++P P V+ G AVT
Sbjct: 3946 WTLSAGGSGTIYGWGH-NHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTA 4004
Query: 116 GGEVYTWGW 124
G++Y G+
Sbjct: 4005 DGKLYATGY 4013
Score = 43 (20.2 bits), Expect = 5.1e-16, Sum P(4) = 5.1e-16
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 220 GVRIATVAAGGRHTLALSD 238
G +I VA G H LA++D
Sbjct: 3257 GKKIVHVAVGALHCLAVTD 3275
Score = 43 (20.2 bits), Expect = 1.3e-05, Sum P(4) = 1.3e-05
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 202 SSGDENLSAFPCLVTLNPGVRIATVAAGG--RHTLALSD 238
SS DE A P LV G+++ VA G TLA+++
Sbjct: 588 SSEDE---AIPMLVAGLKGLKVIDVACGSGDAQTLAVTE 623
Score = 40 (19.1 bits), Expect = 2.0e-16, Sum P(4) = 2.0e-16
Identities = 10/35 (28%), Positives = 15/35 (42%)
Query: 123 GWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTE 157
GW+ +P G G+ T D D+ + L E
Sbjct: 1696 GWQRLIPEGIDIGEPLTDCLRDVDLIPPFNRMLLE 1730
Score = 39 (18.8 bits), Expect = 2.3e-15, Sum P(5) = 2.3e-15
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 299 GNYVKGIACGGRHSAVIT 316
G + +ACG HS T
Sbjct: 3309 GQKITRVACGSSHSVAWT 3326
Score = 39 (18.8 bits), Expect = 5.6e-12, Sum P(4) = 5.6e-12
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 221 VRIATVAAGGRHTLALS 237
V+ V +GGRH AL+
Sbjct: 3048 VKKVAVHSGGRHATALT 3064
Score = 38 (18.4 bits), Expect = 1.6e-12, Sum P(4) = 1.6e-12
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 68 TWGSTDDLGQSYVTSGKHGE 87
T+G ++ GQS V G+ G+
Sbjct: 2747 TFGRINEPGQSAVFCGRSGK 2766
Score = 38 (18.4 bits), Expect = 7.6e-10, Sum P(5) = 7.6e-10
Identities = 6/9 (66%), Positives = 6/9 (66%)
Query: 424 DGKVFCWGW 432
DG V WGW
Sbjct: 3696 DGSVNGWGW 3704
>UNIPROTKB|Q5GLZ8 [details] [associations]
symbol:HERC4 "Probable E3 ubiquitin-protein ligase HERC4"
species:9606 "Homo sapiens" [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0007283
"spermatogenesis" evidence=ISS] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829 GO:GO:0005634
GO:GO:0005737 GO:GO:0030154 GO:GO:0007283 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 HOGENOM:HOG000208452
HOVERGEN:HBG050878 EMBL:AY221963 EMBL:AY650032 EMBL:AY650033
EMBL:AY650034 EMBL:AB046813 EMBL:AL356741 EMBL:AC024258
EMBL:AL133551 EMBL:BC039600 IPI:IPI00333067 IPI:IPI00552050
IPI:IPI00604497 IPI:IPI00827523 IPI:IPI00827948 IPI:IPI00827992
RefSeq:NP_056416.2 RefSeq:NP_071362.1 UniGene:Hs.51891 HSSP:Q9UEP9
ProteinModelPortal:Q5GLZ8 SMR:Q5GLZ8 IntAct:Q5GLZ8 STRING:Q5GLZ8
PhosphoSite:Q5GLZ8 DMDM:74707832 PaxDb:Q5GLZ8 PRIDE:Q5GLZ8
DNASU:26091 Ensembl:ENST00000277817 Ensembl:ENST00000373700
Ensembl:ENST00000395187 Ensembl:ENST00000395198
Ensembl:ENST00000412272 Ensembl:ENST00000473533
Ensembl:ENST00000492996 GeneID:26091 KEGG:hsa:26091 UCSC:uc001jng.4
UCSC:uc001jnh.4 UCSC:uc001jnk.3 UCSC:uc009xpr.3 CTD:26091
GeneCards:GC10M069681 HGNC:HGNC:24521 HPA:HPA045453 MIM:609248
neXtProt:NX_Q5GLZ8 PharmGKB:PA134949021 InParanoid:Q5GLZ8 KO:K10615
ChiTaRS:HERC4 GenomeRNAi:26091 NextBio:48027 ArrayExpress:Q5GLZ8
Bgee:Q5GLZ8 CleanEx:HS_HERC4 Genevestigator:Q5GLZ8 Uniprot:Q5GLZ8
Length = 1057
Score = 209 (78.6 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 56/176 (31%), Positives = 86/176 (48%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLY--GQCGQ-GSTDDELSPNCVSSLLGIQIEGVA 358
+ ++CG H+ + D G + + WGL GQ G GS + P + SL IQI VA
Sbjct: 86 IVAVSCGEAHTLALNDKGQV--YAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 359 AGLWHTICISSDGDVYAXXXXXXXXXXXXXD-QAETLPRLLDAPSLENVHSKSVSCGARH 417
G +H++ +S +V+ D + +T P+LL SL + V+ G H
Sbjct: 144 CGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLK--SLLGIPFMQVAAGGAH 201
Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLL 472
+ V+ G +F WG NK+GQLGL D DR +P+ + ++ + CG HT L
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257
Score = 206 (77.6 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 65/206 (31%), Positives = 91/206 (44%)
Query: 274 SYGKDRSAALSRGSVNSEGPGFRVPGNY-------VKGIACGGRHSAVITDAGALLTFGW 326
++G D L G V SE RVP N + +ACG HS ++ A + +G
Sbjct: 107 AWGLDSDGQL--GLVGSE-ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 327 GLYGQCGQGSTD--DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXX 384
YGQ G G TD + SP + SLLGI VAAG H+ ++ G ++
Sbjct: 164 NKYGQLGLG-TDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQL 222
Query: 385 XXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVI 444
+ +P LL SL + + CG HTA + +G VF +G YGQLG
Sbjct: 223 GLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 445 DRNIPSQV-TIEGCVPRNVACGWWHT 469
P +V + G + +ACG HT
Sbjct: 281 HEINPRKVFELMGSIVTEIACGRQHT 306
Score = 204 (76.9 bits), Expect = 5.7e-13, P = 5.7e-13
Identities = 53/176 (30%), Positives = 83/176 (47%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
V+ + CG RH+ + D G + T G GQ G + + P V +L I V+ G
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93
Query: 362 WHTICISSDGDVYA-XXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
HT+ ++ G VYA ++ +PR + SL ++ V+CG H+
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLA 151
Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
++ +VFCWG NKYGQLGLG + Q+ ++ G VA G H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL 207
Score = 182 (69.1 bits), Expect = 5.0e-16, Sum P(3) = 5.0e-16
Identities = 50/164 (30%), Positives = 75/164 (45%)
Query: 305 IACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
+A GG HS V+T +GA+ FGWG +GQ G +D PN + SL +I + G
Sbjct: 195 VAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGED 252
Query: 363 HTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVI 421
HT ++ +G V+ E PR + L ++CG +HT A +
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF--ELMGSIVTEIACGRQHTSAFV 310
Query: 422 ADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEG-CVPRNVAC 464
G+++ +G GQLG G +R P T++G P N C
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSP--FTVKGNWYPYNGQC 352
Score = 181 (68.8 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 52/160 (32%), Positives = 78/160 (48%)
Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXX 378
+L +G +GQ G G D+E L P + ++ V GL HT+ + DG VY
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 379 XXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
+++ P + A +N+ +VSCG HT + D G+V+ WG + GQL
Sbjct: 61 NDLGQLGH--EKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 439 GL-GDV----IDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
GL G + RNI S I+ V VACG++H+L L+
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQ-IV--QVACGYYHSLALS 153
Score = 101 (40.6 bits), Expect = 4.8e-07, Sum P(3) = 4.8e-07
Identities = 27/74 (36%), Positives = 38/74 (51%)
Query: 274 SYGKDRSAALSRGSVNSE-GPG--FRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLY 329
++G L S + E P F + G+ V IACG +H SA + +G + +FG G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGN 324
Query: 330 GQCGQGSTDDELSP 343
GQ G GST + SP
Sbjct: 325 GQLGTGSTSNRKSP 338
Score = 99 (39.9 bits), Expect = 5.0e-16, Sum P(3) = 5.0e-16
Identities = 28/102 (27%), Positives = 49/102 (48%)
Query: 47 RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQ-SYVTSGKHGEIPEPFPLPTEASIVKA 103
+++ CG A +A++D ++ WG D GQ V S + +P ++ IV+
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSD-GQLGLVGSEECIRVPRNIKSLSDIQIVQV 142
Query: 104 AAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDK 145
A G+ H +A+++ EV+ WG + +G L GT K
Sbjct: 143 ACGYYHSLALSKASEVFCWGQNK-------YGQLGLGTDCKK 177
Score = 87 (35.7 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 27/79 (34%), Positives = 39/79 (49%)
Query: 47 RDVCGGGCGF--AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
RDV GCG + + D + T G +DLGQ + K + PE +IV +
Sbjct: 37 RDV---GCGLRHTVFVLDDGTVYTCGC-NDLGQ--LGHEKSRKKPEQVVALDAQNIVAVS 90
Query: 105 AGWAHCVAVTEGGEVYTWG 123
G AH +A+ + G+VY WG
Sbjct: 91 CGEAHTLALNDKGQVYAWG 109
Score = 78 (32.5 bits), Expect = 8.1e-14, Sum P(2) = 8.1e-14
Identities = 28/114 (24%), Positives = 49/114 (42%)
Query: 14 VFMWGYLPGALPQRSPILSPLVVRLPLTVGSAWR-DVCGGGCGF--AMAISDSRKLITWG 70
V+ WG Q + S +R+P + S + CG+ ++A+S + ++ WG
Sbjct: 105 VYAWGLDSDG--QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG 162
Query: 71 STDDLGQSYV-TSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
+ GQ + T K P+ ++ AAG AH +T G ++ WG
Sbjct: 163 Q-NKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWG 215
Score = 45 (20.9 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 13/35 (37%), Positives = 15/35 (42%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSD 238
G E P V I V+ G HTLAL+D
Sbjct: 67 GHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALND 101
Score = 43 (20.2 bits), Expect = 6.7e-15, Sum P(3) = 6.7e-15
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS 237
G E P + ++I VA G H+LALS
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
Score = 42 (19.8 bits), Expect = 5.0e-16, Sum P(3) = 5.0e-16
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 220 GVRIATVAAGGRHTLALS 237
G+ VAAGG H+ L+
Sbjct: 189 GIPFMQVAAGGAHSFVLT 206
Score = 38 (18.4 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 11/33 (33%), Positives = 15/33 (45%)
Query: 205 DENLSAFPCLVTLNPGVRIATVAAGGRHTLALS 237
DEN P L+ +I + G HT AL+
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYICCGEDHTAALT 258
>RGD|1307803 [details] [associations]
symbol:Herc3 "HECT and RLD domain containing E3 ubiquitin
protein ligase 3" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0005737 "cytoplasm" evidence=ISO;IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 RGD:1307803
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 EMBL:CH474011 IPI:IPI00568958 UniGene:Rn.203362
Ensembl:ENSRNOT00000009694 UCSC:RGD:1307803 Uniprot:D3ZYI2
Length = 909
Score = 211 (79.3 bits), Expect = 2.2e-17, Sum P(2) = 2.2e-17
Identities = 53/171 (30%), Positives = 83/171 (48%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVAAGLWH 363
+ACG HS ++D G L ++G G GQ G +T+D ++ P + L I V+ G WH
Sbjct: 89 VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH 148
Query: 364 TICISSDGDVYAXXXXXXXXXXXXXD-QAETLPRLLDAPSLENVHSKSVSCGARHTAVIA 422
+ +++DG + + ++T P+ + SLE + V+ G H+ ++
Sbjct: 149 CLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVR--SLEGIPLAQVAAGGAHSFALS 206
Query: 423 DDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPR-NVACGWWHTLLL 472
G VF WG N GQLGL D DR P V + ++CG HT +L
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVL 257
Score = 204 (76.9 bits), Expect = 4.6e-13, P = 4.6e-13
Identities = 52/176 (29%), Positives = 85/176 (48%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
+K +ACGG HS + + G + T G GQ G ++ P + +L I VA G
Sbjct: 36 IKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNK--PEQIGALADQHIIHVACGE 93
Query: 362 WHTICISSDGDVYA-XXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
H++ +S G +++ + + +PRL+ + + + VSCG H
Sbjct: 94 SHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLA 151
Query: 421 IADDGKVFCWGWNKYGQLGLG-DVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLAV 474
+A DG+ F WG N +GQLGLG + + P +V ++EG VA G H+ L++
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSL 207
Score = 191 (72.3 bits), Expect = 2.1e-17, Sum P(2) = 2.1e-17
Identities = 56/173 (32%), Positives = 76/173 (43%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDELSPNCVSSLLGIQIEGVAAGLWH 363
++CG H + G T+G +GQ G G + SP V SL GI + VAAG H
Sbjct: 142 VSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAH 201
Query: 364 TICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
+ +S G V+ ++ P + + V +SCG HTAV+
Sbjct: 202 SFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKV--VYISCGEEHTAVLTK 259
Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLAVP 475
G VF +G GQLG V D P +V + G +ACG HTL L VP
Sbjct: 260 SGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLAL-VP 311
Score = 154 (59.3 bits), Expect = 1.0e-14, Sum P(3) = 1.0e-14
Identities = 47/154 (30%), Positives = 71/154 (46%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLY--GQCGQGSTDDELSPNCVSSLLGIQ-IEGVAAGL 361
+A GG HS ++ +GA+ FGWG+ GQ G D SP C LL Q + ++ G
Sbjct: 195 VAAGGAHSFALSLSGAV--FGWGMNNAGQLGLSDEKDRESP-CHVKLLRTQKVVYISCGE 251
Query: 362 WHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSK--SVSCGARHT- 418
HT ++ G V+ E PR + LE + S+ ++CG +HT
Sbjct: 252 EHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRV----LELMGSEVTQIACGRQHTL 307
Query: 419 AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
A++ G ++ +G GQLG G + PS V
Sbjct: 308 ALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPV 341
Score = 135 (52.6 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 44/157 (28%), Positives = 68/157 (43%)
Query: 321 LLTFGWGLYGQCGQGSTDDEL--SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXX 378
+L +G+ GQ G S + P + I+ VA G H++ + DG+VY
Sbjct: 1 MLCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGV 60
Query: 379 XXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
++ P + A L + H V+CG H+ ++D G++F WG GQL
Sbjct: 61 NTKGQLGH--EREGNKPEQIGA--LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQL 116
Query: 439 GLGDVIDR-NIPSQVT-IEGCVPRNVACGWWHTLLLA 473
GL D +P + + V+CG WH L LA
Sbjct: 117 GLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA 153
Score = 101 (40.6 bits), Expect = 2.1e-17, Sum P(2) = 2.1e-17
Identities = 25/89 (28%), Positives = 47/89 (52%)
Query: 39 PLTVGS-AWRDVCGGGCG--FAMAISDSRKLITWGSTDDLGQ-SYVTSGKHGEIPEPFPL 94
P +G+ A + + CG ++A+SD +L +WG+ D GQ +T+ +P
Sbjct: 75 PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD-GQLGLMTTEDSVAVPRLIQK 133
Query: 95 PTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
+ +I++ + G HC+A+ G+ +TWG
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWG 162
Score = 93 (37.8 bits), Expect = 4.6e-08, Sum P(3) = 4.6e-08
Identities = 27/77 (35%), Positives = 38/77 (49%)
Query: 274 SYGKDRSAALSRGSVNSEGPGFRV---PGNYVKGIACGGRHS-AVITDAGALLTFGWGLY 329
++G L SVN E RV G+ V IACG +H+ A++ +G + FG G
Sbjct: 265 TFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAK 324
Query: 330 GQCGQGSTDDELSPNCV 346
GQ G G T + P+ V
Sbjct: 325 GQLGTGHTCNVKCPSPV 341
Score = 80 (33.2 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 22/77 (28%), Positives = 37/77 (48%)
Query: 51 GGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
GG FA+++S + + WG ++ GQ ++ K E P L +V + G H
Sbjct: 198 GGAHSFALSLSGA--VFGWGM-NNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHT 254
Query: 111 VAVTEGGEVYTWGWKEC 127
+T+ G V+T+G C
Sbjct: 255 AVLTKSGGVFTFGAGSC 271
Score = 79 (32.9 bits), Expect = 2.2e-17, Sum P(2) = 2.2e-17
Identities = 28/112 (25%), Positives = 52/112 (46%)
Query: 17 WGYL----PGALPQRSPILS-PLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGS 71
WGY PG I++ P V R ++ S CGG ++ + + ++ T G
Sbjct: 4 WGYWSLGQPGISSNLQGIVAEPQVCRF-VSDRSIKEVACGGN--HSVFLLEDGEVYTCG- 59
Query: 72 TDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
+ GQ + + G PE + I+ A G +H +A+++ G++++WG
Sbjct: 60 VNTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG 109
Score = 56 (24.8 bits), Expect = 1.0e-14, Sum P(3) = 1.0e-14
Identities = 11/18 (61%), Positives = 14/18 (77%)
Query: 220 GVRIATVAAGGRHTLALS 237
G+ +A VAAGG H+ ALS
Sbjct: 189 GIPLAQVAAGGAHSFALS 206
Score = 43 (20.2 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 10/16 (62%), Positives = 11/16 (68%)
Query: 223 IATVAAGGRHTLALSD 238
I VA G H+LALSD
Sbjct: 86 IIHVACGESHSLALSD 101
Score = 42 (19.8 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 205 DENLSAFPCLVTLNPGVRIATVAAGGRHTLALS 237
DE PC V L ++ ++ G HT L+
Sbjct: 226 DEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
>UNIPROTKB|E1C514 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:SPAVDFR EMBL:AADN02016126
EMBL:AADN02016127 EMBL:AADN02016128 EMBL:AADN02016129
IPI:IPI00576498 Ensembl:ENSGALT00000016877 ArrayExpress:E1C514
Uniprot:E1C514
Length = 1050
Score = 232 (86.7 bits), Expect = 4.2e-16, P = 4.2e-16
Identities = 60/184 (32%), Positives = 90/184 (48%)
Query: 294 GFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ 353
GF + VK +ACGG HS + + G + T G GQ G S + P V +L G
Sbjct: 29 GF-IHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHESEGSK--PAWVGTLAGQH 85
Query: 354 IEGVAAGLWHTICISSDGDVYA-XXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVS 412
I VA G H++ +S G V++ + A T+PRL+ + + + +S
Sbjct: 86 IVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTI--LQIS 143
Query: 413 CGARHTAVIADDGKVFCWGWNKYGQLGLG-DVIDRNIPSQV-TIEGCVPRNVACGWWHTL 470
CG H +A DG+ F WG N YGQLGLG + + P +V +++G VA G H+
Sbjct: 144 CGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSF 203
Query: 471 LLAV 474
L++
Sbjct: 204 ALSL 207
Score = 202 (76.2 bits), Expect = 4.1e-17, Sum P(3) = 4.1e-17
Identities = 49/177 (27%), Positives = 84/177 (47%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGV 357
G ++ +ACG HS ++D G + ++G G GQ G + +D ++ P + L I +
Sbjct: 83 GQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQI 142
Query: 358 AAGLWHTICISSDGDVYAXXXXXXXXXXXXXD-QAETLPRLLDAPSLENVHSKSVSCGAR 416
+ G WH + +++DG + + ++ P+ + SL+ + V+ G
Sbjct: 143 SCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVK--SLDGIPLAQVAAGGA 200
Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACGWWHTLLL 472
H+ ++ G VF WG N GQLGL D DR P V + ++CG HT +L
Sbjct: 201 HSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVL 257
Score = 193 (73.0 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
Identities = 56/173 (32%), Positives = 74/173 (42%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDELSPNCVSSLLGIQIEGVAAGLWH 363
I+CG H + G T+G YGQ G G + SP V SL GI + VAAG H
Sbjct: 142 ISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAH 201
Query: 364 TICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
+ +S G V+ ++ P L + +SCG HTAV+
Sbjct: 202 SFALSLSGAVFGWGKNSSGQLGLSDERDRESP--CHVKLLRSQKVVYISCGEEHTAVLTK 259
Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLAVP 475
G VF +G GQLG + D P +V + G +ACG HTL VP
Sbjct: 260 SGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAF-VP 311
Score = 156 (60.0 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 43/157 (27%), Positives = 71/157 (45%)
Query: 321 LLTFGWGLYGQCGQGSTDDEL--SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXX 378
+L +G+ +GQ G GS + P + ++ VA G H++ + DG+VY
Sbjct: 1 MLCWGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL 60
Query: 379 XXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
+ ++ P + +L H V+CG H+ ++D G+VF WG GQL
Sbjct: 61 NTKGQLGHESEGSK--PAWVG--TLAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQL 116
Query: 439 GLGDVIDR-NIPSQVT-IEGCVPRNVACGWWHTLLLA 473
GL + D +P + + ++CG WH L LA
Sbjct: 117 GLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALA 153
Score = 154 (59.3 bits), Expect = 5.5e-13, Sum P(2) = 5.5e-13
Identities = 30/72 (41%), Positives = 45/72 (62%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
I+CG H+AV+T +G + TFG G GQ G S +DE++P V L+G ++ +A G HT
Sbjct: 247 ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHT 306
Query: 365 IC-ISSDGDVYA 375
+ + S G +YA
Sbjct: 307 LAFVPSSGMIYA 318
Score = 100 (40.3 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
Identities = 25/89 (28%), Positives = 48/89 (53%)
Query: 39 PLTVGS-AWRDVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHG-EIPEPFPL 94
P VG+ A + + CG ++A+SD ++ +WG+ D GQ +T+ + +P
Sbjct: 75 PAWVGTLAGQHIVHVACGESHSVALSDQGQVFSWGAGSD-GQLGLTTIEDAVTVPRLIKK 133
Query: 95 PTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
+ +I++ + G HC+A+ G+ +TWG
Sbjct: 134 LNQQTILQISCGNWHCLALAADGQFFTWG 162
Score = 88 (36.0 bits), Expect = 3.7e-06, Sum P(3) = 3.7e-06
Identities = 26/77 (33%), Positives = 36/77 (46%)
Query: 274 SYGKDRSAALSRGSVNSEGPGFRV---PGNYVKGIACGGRHS-AVITDAGALLTFGWGLY 329
++G L S+N E RV G+ V IACG H+ A + +G + FG G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTR 324
Query: 330 GQCGQGSTDDELSPNCV 346
GQ G G T + P+ V
Sbjct: 325 GQLGTGHTCNVKCPSPV 341
Score = 76 (31.8 bits), Expect = 4.1e-17, Sum P(3) = 4.1e-17
Identities = 20/60 (33%), Positives = 30/60 (50%)
Query: 66 LITWGSTDDLGQSYVTSGKHGEIPEP--FPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
++ WG + GQ + S IPEP + + ++ + A G H V + E GEVYT G
Sbjct: 1 MLCWGYSS-FGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCG 59
Score = 64 (27.6 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 22/77 (28%), Positives = 34/77 (44%)
Query: 54 CG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIP-EPFPLPTEA----SIVKAAAG 106
CG +A++ + TWG SY G E P + P ++ + + AAG
Sbjct: 144 CGNWHCLALAADGQFFTWGQN-----SYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAG 198
Query: 107 WAHCVAVTEGGEVYTWG 123
AH A++ G V+ WG
Sbjct: 199 GAHSFALSLSGAVFGWG 215
Score = 53 (23.7 bits), Expect = 4.1e-17, Sum P(3) = 4.1e-17
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSD 238
G E+ + P V G I VA G H++ALSD
Sbjct: 67 GHESEGSKPAWVGTLAGQHIVHVACGESHSVALSD 101
Score = 45 (20.9 bits), Expect = 3.7e-06, Sum P(3) = 3.7e-06
Identities = 11/43 (25%), Positives = 18/43 (41%)
Query: 195 KQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS 237
K ++ DE PC V L ++ ++ G HT L+
Sbjct: 216 KNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLT 258
>TAIR|locus:2086253 [details] [associations]
symbol:AT3G23270 "AT3G23270" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007165 "signal
transduction" evidence=ISS] [GO:0035091 "phosphatidylinositol
binding" evidence=ISS] [GO:0009827 "plant-type cell wall
modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=RCA] InterPro:IPR000306 InterPro:IPR001849
InterPro:IPR024774 Pfam:PF01363 Pfam:PF12814 PROSITE:PS50003
SMART:SM00064 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005938 EMBL:CP002686 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS50012
GO:GO:0032065 InterPro:IPR013591 Pfam:PF08381 PROSITE:PS51514
IPI:IPI00516271 RefSeq:NP_188968.1 UniGene:At.53452
ProteinModelPortal:F4J2Y2 SMR:F4J2Y2 PRIDE:F4J2Y2
EnsemblPlants:AT3G23270.1 GeneID:821906 KEGG:ath:AT3G23270
OMA:PKFRAFR ArrayExpress:F4J2Y2 Uniprot:F4J2Y2
Length = 1045
Score = 220 (82.5 bits), Expect = 3.2e-17, Sum P(2) = 3.2e-17
Identities = 55/171 (32%), Positives = 85/171 (49%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
V I CG RH A++T G + T+G + G+ G G D P V L I+ VA G
Sbjct: 253 VHQIVCGVRHVALVTRQGEVFTWGEEVGGRLGHGIQVDISRPKLVEFLALTNIDFVACGE 312
Query: 362 WHTICISSDGDVYA--XXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
+HT +S+ GD+++ D + +P+ + P LE + SV+CG H+A
Sbjct: 313 YHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGP-LEGLQVLSVACGTWHSA 371
Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
+ +GK+F +G +G LG G+ + P +V ++ G VAC WHT
Sbjct: 372 LATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSLNGLKTVKVACSIWHT 422
Score = 180 (68.4 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 57/186 (30%), Positives = 77/186 (41%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
G V +ACG HSA+ T G L TFG G +G G G+ + P V SL G++ VA
Sbjct: 357 GLQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSLNGLKTVKVA 416
Query: 359 AGLWHTICISSD-GDVYAXXXXXXXXXXXXXDQ-------AET--LPRLLDAPSLENVHS 408
+WHT I G D+ ET LP + + N H
Sbjct: 417 CSIWHTAAIVEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHK 476
Query: 409 KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT--IEGCVPRNVACGW 466
++CG T + G VF G +GQLG + D +P V + G +ACG
Sbjct: 477 --IACGHTFTVALTTSGHVFTMGGTAHGQLG-NSISDGKLPCLVQDRLVGEFVEEIACGA 533
Query: 467 WHTLLL 472
H +L
Sbjct: 534 HHVAVL 539
Score = 175 (66.7 bits), Expect = 9.0e-10, P = 9.0e-10
Identities = 55/214 (25%), Positives = 93/214 (43%)
Query: 271 IESSYGKDRSAALSRGSV-NSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFG--W- 326
I+ Y + RG++ GFR+ + + GG I G + +G W
Sbjct: 162 IDLGYQNNSDVGYERGNMLRPSTDGFRISVSSTPSCSSGGSGPDDIESLGDVYVWGEVWT 221
Query: 327 -GLYGQCGQGSTD----DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXX 381
G+ G S + D L+P + S + + + + G+ H ++ G+V+
Sbjct: 222 EGILPD-GTASNETVKTDVLTPRPLESNVVLDVHQIVCGVRHVALVTRQGEVFTWGEEVG 280
Query: 382 XXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWG--WNKYGQLG 439
+ P+L++ +L N+ V+CG HT V++ G +F WG + G LG
Sbjct: 281 GRLGHGIQVDISRPKLVEFLALTNIDF--VACGEYHTCVVSTSGDLFSWGDGIHNVGLLG 338
Query: 440 LGDVIDRNIPSQVT--IEGCVPRNVACGWWHTLL 471
G I IP +V+ +EG +VACG WH+ L
Sbjct: 339 HGSDISHWIPKRVSGPLEGLQVLSVACGTWHSAL 372
Score = 172 (65.6 bits), Expect = 8.8e-12, Sum P(2) = 8.8e-12
Identities = 42/146 (28%), Positives = 68/146 (46%)
Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXX 380
L T+G G + G G+ + L P CVSSL+ +A G T+ +++ G V+
Sbjct: 441 LFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALTTSGHVFTMGGTA 500
Query: 381 XXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL 440
+ LP L+ L + ++CGA H AV+ +VF WG G+LG
Sbjct: 501 HGQLGNSISDGK-LPCLVQ-DRLVGEFVEEIACGAHHVAVLTSRSEVFTWGKGANGRLGH 558
Query: 441 GDVIDRNIPSQV-TIEGCVPRNVACG 465
GD D+ P+ V + ++++CG
Sbjct: 559 GDTEDKRTPTLVEALRDRHVKSLSCG 584
Score = 133 (51.9 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 35/122 (28%), Positives = 58/122 (47%)
Query: 300 NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAA 359
N+ K IACG + +T +G + T G +GQ G +D +L L+G +E +A
Sbjct: 473 NFHK-IACGHTFTVALTTSGHVFTMGGTAHGQLGNSISDGKLPCLVQDRLVGEFVEEIAC 531
Query: 360 GLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
G H ++S +V+ + + P L++A L + H KS+SCG+ T+
Sbjct: 532 GAHHVAVLTSRSEVFTWGKGANGRLGHGDTEDKRTPTLVEA--LRDRHVKSLSCGSNFTS 589
Query: 420 VI 421
I
Sbjct: 590 SI 591
Score = 127 (49.8 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 27/74 (36%), Positives = 42/74 (56%)
Query: 296 RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
R+ G +V+ IACG H AV+T + T+G G G+ G G T+D+ +P V +L ++
Sbjct: 520 RLVGEFVEEIACGAHHVAVLTSRSEVFTWGKGANGRLGHGDTEDKRTPTLVEALRDRHVK 579
Query: 356 GVAAGLWHT--ICI 367
++ G T ICI
Sbjct: 580 SLSCGSNFTSSICI 593
Score = 71 (30.1 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 27/69 (39%), Positives = 33/69 (47%)
Query: 63 SRKLITWGSTDD--LGQSYVTSGKHGEIPEPFPLPT-EASIV-----KAAAGWAHCVAVT 114
SRKL TWG D LG HG E + LPT +S++ K A G VA+T
Sbjct: 438 SRKLFTWGDGDKNRLG--------HGN-KETYLLPTCVSSLIDYNFHKIACGHTFTVALT 488
Query: 115 EGGEVYTWG 123
G V+T G
Sbjct: 489 TSGHVFTMG 497
Score = 69 (29.3 bits), Expect = 3.2e-17, Sum P(2) = 3.2e-17
Identities = 26/104 (25%), Positives = 40/104 (38%)
Query: 26 QRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGS--TDDLGQSYVTSG 83
+R +L P ++V S C G I + WG T+ + S
Sbjct: 175 ERGNMLRPSTDGFRISVSST--PSCSSGGSGPDDIESLGDVYVWGEVWTEGILPDGTASN 232
Query: 84 KHGEIPEPFPLPTEASIV----KAAAGWAHCVAVTEGGEVYTWG 123
+ + P P E+++V + G H VT GEV+TWG
Sbjct: 233 ETVKTDVLTPRPLESNVVLDVHQIVCGVRHVALVTRQGEVFTWG 276
Score = 59 (25.8 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 31/133 (23%), Positives = 59/133 (44%)
Query: 3 GEGQEEKMERV--VFMWG--YLPGALPQ----RSPILSPLVVRLPLTVGSAWRDVCGGGC 54
G G ++ +E + V++WG + G LP + + ++ PL + DV C
Sbjct: 201 GSGPDD-IESLGDVYVWGEVWTEGILPDGTASNETVKTDVLTPRPLE-SNVVLDVHQIVC 258
Query: 55 GF--AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEA--SIVKAAAGWAHC 110
G ++ ++ TWG +++G + G +I P + A +I A G H
Sbjct: 259 GVRHVALVTRQGEVFTWG--EEVG-GRLGHGIQVDISRPKLVEFLALTNIDFVACGEYHT 315
Query: 111 VAVTEGGEVYTWG 123
V+ G++++WG
Sbjct: 316 CVVSTSGDLFSWG 328
Score = 58 (25.5 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 20/74 (27%), Positives = 31/74 (41%)
Query: 54 CG--FAMAISDSRKLITWGS-TDDLGQSYVTSGKHGEIPEPFPLPTEA-SIVKAAAGWAH 109
CG +S S L +WG ++G S IP+ P E ++ A G H
Sbjct: 310 CGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACGTWH 369
Query: 110 CVAVTEGGEVYTWG 123
T G+++T+G
Sbjct: 370 SALATANGKLFTFG 383
>UNIPROTKB|F1NBC5 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 EMBL:AADN02016126 EMBL:AADN02016127
EMBL:AADN02016128 EMBL:AADN02016129 IPI:IPI00572483
Ensembl:ENSGALT00000016878 ArrayExpress:F1NBC5 Uniprot:F1NBC5
Length = 1050
Score = 232 (86.7 bits), Expect = 4.2e-16, P = 4.2e-16
Identities = 59/184 (32%), Positives = 90/184 (48%)
Query: 294 GFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ 353
GF + VK +ACGG HS + + G + T G GQ G S + P + +L G
Sbjct: 29 GF-IHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHESEGSKPEP--IGALAGQH 85
Query: 354 IEGVAAGLWHTICISSDGDVYA-XXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVS 412
I VA G H++ +S G V++ + A T+PRL+ + + + +S
Sbjct: 86 IVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTI--LQIS 143
Query: 413 CGARHTAVIADDGKVFCWGWNKYGQLGLG-DVIDRNIPSQV-TIEGCVPRNVACGWWHTL 470
CG H +A DG+ F WG N YGQLGLG + + P +V +++G VA G H+
Sbjct: 144 CGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSF 203
Query: 471 LLAV 474
L++
Sbjct: 204 ALSL 207
Score = 202 (76.2 bits), Expect = 7.3e-13, Sum P(2) = 7.3e-13
Identities = 49/177 (27%), Positives = 84/177 (47%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGV 357
G ++ +ACG HS ++D G + ++G G GQ G + +D ++ P + L I +
Sbjct: 83 GQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQI 142
Query: 358 AAGLWHTICISSDGDVYAXXXXXXXXXXXXXD-QAETLPRLLDAPSLENVHSKSVSCGAR 416
+ G WH + +++DG + + ++ P+ + SL+ + V+ G
Sbjct: 143 SCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVK--SLDGIPLAQVAAGGA 200
Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACGWWHTLLL 472
H+ ++ G VF WG N GQLGL D DR P V + ++CG HT +L
Sbjct: 201 HSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVL 257
Score = 193 (73.0 bits), Expect = 3.8e-17, Sum P(2) = 3.8e-17
Identities = 56/173 (32%), Positives = 74/173 (42%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDELSPNCVSSLLGIQIEGVAAGLWH 363
I+CG H + G T+G YGQ G G + SP V SL GI + VAAG H
Sbjct: 142 ISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAH 201
Query: 364 TICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
+ +S G V+ ++ P L + +SCG HTAV+
Sbjct: 202 SFALSLSGAVFGWGKNSSGQLGLSDERDRESP--CHVKLLRSQKVVYISCGEEHTAVLTK 259
Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLAVP 475
G VF +G GQLG + D P +V + G +ACG HTL VP
Sbjct: 260 SGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAF-VP 311
Score = 160 (61.4 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 44/157 (28%), Positives = 71/157 (45%)
Query: 321 LLTFGWGLYGQCGQGSTDDEL--SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXX 378
+L +G+ +GQ G GS + P + ++ VA G H++ + DG+VY
Sbjct: 1 MLCWGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL 60
Query: 379 XXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
+ ++ P + A L H V+CG H+ ++D G+VF WG GQL
Sbjct: 61 NTKGQLGHESEGSK--PEPIGA--LAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQL 116
Query: 439 GLGDVIDR-NIPSQVT-IEGCVPRNVACGWWHTLLLA 473
GL + D +P + + ++CG WH L LA
Sbjct: 117 GLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALA 153
Score = 154 (59.3 bits), Expect = 8.8e-13, Sum P(2) = 8.8e-13
Identities = 30/72 (41%), Positives = 45/72 (62%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
I+CG H+AV+T +G + TFG G GQ G S +DE++P V L+G ++ +A G HT
Sbjct: 247 ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHT 306
Query: 365 IC-ISSDGDVYA 375
+ + S G +YA
Sbjct: 307 LAFVPSSGMIYA 318
Score = 98 (39.6 bits), Expect = 3.8e-17, Sum P(2) = 3.8e-17
Identities = 24/89 (26%), Positives = 48/89 (53%)
Query: 39 PLTVGS-AWRDVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHG-EIPEPFPL 94
P +G+ A + + CG ++A+SD ++ +WG+ D GQ +T+ + +P
Sbjct: 75 PEPIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSD-GQLGLTTIEDAVTVPRLIKK 133
Query: 95 PTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
+ +I++ + G HC+A+ G+ +TWG
Sbjct: 134 LNQQTILQISCGNWHCLALAADGQFFTWG 162
Score = 88 (36.0 bits), Expect = 6.2e-06, Sum P(3) = 6.2e-06
Identities = 26/77 (33%), Positives = 36/77 (46%)
Query: 274 SYGKDRSAALSRGSVNSEGPGFRV---PGNYVKGIACGGRHS-AVITDAGALLTFGWGLY 329
++G L S+N E RV G+ V IACG H+ A + +G + FG G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTR 324
Query: 330 GQCGQGSTDDELSPNCV 346
GQ G G T + P+ V
Sbjct: 325 GQLGTGHTCNVKCPSPV 341
Score = 83 (34.3 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 30/110 (27%), Positives = 49/110 (44%)
Query: 17 WGYLPGALPQRSPILSPLVVRLPLTVGSAW-RDVCGGGCG--FAMAISDSRKLITWGSTD 73
WGY P L +++ P G R+V CG ++ + + ++ T G +
Sbjct: 4 WGYSSFGQPGIGSNLQ-VIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCG-LN 61
Query: 74 DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
GQ + G PEP IV A G +H VA+++ G+V++WG
Sbjct: 62 TKGQ--LGHESEGSKPEPIGALAGQHIVHVACGESHSVALSDQGQVFSWG 109
Score = 64 (27.6 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 22/77 (28%), Positives = 34/77 (44%)
Query: 54 CG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIP-EPFPLPTEA----SIVKAAAG 106
CG +A++ + TWG SY G E P + P ++ + + AAG
Sbjct: 144 CGNWHCLALAADGQFFTWGQN-----SYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAG 198
Query: 107 WAHCVAVTEGGEVYTWG 123
AH A++ G V+ WG
Sbjct: 199 GAHSFALSLSGAVFGWG 215
Score = 47 (21.6 bits), Expect = 7.3e-13, Sum P(2) = 7.3e-13
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSD 238
G E+ + P + G I VA G H++ALSD
Sbjct: 67 GHESEGSKPEPIGALAGQHIVHVACGESHSVALSD 101
Score = 45 (20.9 bits), Expect = 6.2e-06, Sum P(3) = 6.2e-06
Identities = 11/43 (25%), Positives = 18/43 (41%)
Query: 195 KQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS 237
K ++ DE PC V L ++ ++ G HT L+
Sbjct: 216 KNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLT 258
>TAIR|locus:505006603 [details] [associations]
symbol:AT5G12350 "AT5G12350" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=ISS] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009630 "gravitropism" evidence=RCA]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0009888 "tissue
development" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0010638 "positive regulation of
organelle organization" evidence=RCA] [GO:0033044 "regulation of
chromosome organization" evidence=RCA] [GO:0042546 "cell wall
biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045492 "xylan biosynthetic
process" evidence=RCA] InterPro:IPR000306 InterPro:IPR001849
InterPro:IPR024774 Pfam:PF01363 Pfam:PF12814 SMART:SM00064
SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005886
GO:GO:0005938 EMBL:CP002688 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0032065 InterPro:IPR013591 Pfam:PF08381
PROSITE:PS51514 IPI:IPI00540281 RefSeq:NP_568268.3 UniGene:At.22310
UniGene:At.51056 ProteinModelPortal:F4K0X5 SMR:F4K0X5
EnsemblPlants:AT5G12350.1 GeneID:831110 KEGG:ath:AT5G12350
OMA:NTNGHPR Uniprot:F4K0X5
Length = 1075
Score = 241 (89.9 bits), Expect = 4.2e-17, P = 4.2e-17
Identities = 55/171 (32%), Positives = 88/171 (51%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWG--LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAA 359
V+ IACGG+H+ ++T G +F WG G+ G G + P + +L IE VA
Sbjct: 310 VQNIACGGQHAVLVTKQGE--SFSWGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVAC 367
Query: 360 GLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
G +H+ ++ GD+Y + + +P+ ++ LE +H S++CG HTA
Sbjct: 368 GEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNF-LLEGIHVSSIACGPYHTA 426
Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
V+ G++F +G +G LG GD IP +V +++G ACG WHT
Sbjct: 427 VVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHT 477
Score = 195 (73.7 bits), Expect = 9.6e-15, Sum P(2) = 9.6e-15
Identities = 62/217 (28%), Positives = 91/217 (41%)
Query: 274 SYGKDRSAALSRGS-VNSEGP---GFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
++GK L G+ V+ P F + G +V IACG H+AV+T AG L TFG G +
Sbjct: 383 TWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTF 442
Query: 330 GQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI------------SSDGDVYAXX 377
G G G P V SL G++ A G+WHT + S G ++
Sbjct: 443 GVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 502
Query: 378 XXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQ 437
+ + +P + A L + V+CG T + G V+ G YGQ
Sbjct: 503 DGDKGRLGHGNKEPKLVPTCVAA--LVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQ 560
Query: 438 LGLGDVIDRNIPSQVT--IEGCVPRNVACGWWHTLLL 472
LG D P++V + +ACG +H +L
Sbjct: 561 LGNSHA-DGKTPNRVEGKLHKSFVEEIACGAYHVAVL 596
Score = 192 (72.6 bits), Expect = 3.4e-14, Sum P(3) = 3.4e-14
Identities = 48/158 (30%), Positives = 79/158 (50%)
Query: 309 GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICIS 368
G S+ +G L T+G G G+ G G+ + +L P CV++L+ VA G T+ ++
Sbjct: 486 GSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALT 545
Query: 369 SDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVF 428
+ G VY +T P ++ L + ++CGA H AV+ +V+
Sbjct: 546 TSGHVYTMGSPVYGQLGNSHADGKT-PNRVEG-KLHKSFVEEIACGAYHVAVLTSRTEVY 603
Query: 429 CWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
WG G+LG GDV DRN P+ V +++ +++ACG
Sbjct: 604 TWGKGSNGRLGHGDVDDRNSPTLVESLKDKQVKSIACG 641
Score = 167 (63.8 bits), Expect = 7.1e-09, P = 7.1e-09
Identities = 34/136 (25%), Positives = 67/136 (49%)
Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLL 398
D L P + S + + ++ +A G H + ++ G+ ++ D P+L+
Sbjct: 295 DSLLPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLI 354
Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT--IEG 456
DA + N+ + V+CG H+ + G ++ WG +G LG G+ + +P +V +EG
Sbjct: 355 DALNTTNI--ELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEG 412
Query: 457 CVPRNVACGWWHTLLL 472
++ACG +HT ++
Sbjct: 413 IHVSSIACGPYHTAVV 428
Score = 127 (49.8 bits), Expect = 6.1e-07, Sum P(3) = 6.1e-07
Identities = 35/126 (27%), Positives = 58/126 (46%)
Query: 297 VPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ-IE 355
V N+ + +ACG + +T +G + T G +YGQ G D + +PN V L +E
Sbjct: 527 VEPNFCQ-VACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGK-TPNRVEGKLHKSFVE 584
Query: 356 GVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGA 415
+A G +H ++S +VY P L++ SL++ KS++CG
Sbjct: 585 EIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDDRNSPTLVE--SLKDKQVKSIACGT 642
Query: 416 RHTAVI 421
TA +
Sbjct: 643 NFTAAV 648
Score = 126 (49.4 bits), Expect = 7.9e-07, Sum P(3) = 7.9e-07
Identities = 34/90 (37%), Positives = 49/90 (54%)
Query: 286 GSVNSEG--PGFRVPG----NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDD 339
G+ +++G P RV G ++V+ IACG H AV+T + T+G G G+ G G DD
Sbjct: 562 GNSHADGKTPN-RVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDD 620
Query: 340 ELSPNCVSSLLGIQIEGVAAGLWHT--ICI 367
SP V SL Q++ +A G T +CI
Sbjct: 621 RNSPTLVESLKDKQVKSIACGTNFTAAVCI 650
Score = 73 (30.8 bits), Expect = 9.6e-15, Sum P(2) = 9.6e-15
Identities = 22/76 (28%), Positives = 35/76 (46%)
Query: 50 CGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPT--EASIVKAAAGW 107
CGG A+ ++ + +WG + G+ + G I +P + +I A G
Sbjct: 315 CGGQ--HAVLVTKQGESFSWGEESE-GR--LGHGVDSNIQQPKLIDALNTTNIELVACGE 369
Query: 108 AHCVAVTEGGEVYTWG 123
H AVT G++YTWG
Sbjct: 370 FHSCAVTLSGDLYTWG 385
Score = 68 (29.0 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 26/67 (38%), Positives = 32/67 (47%)
Query: 63 SRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPT------EASIVKAAAGWAHCVAVTEG 116
S KL TWG D G+ G HG EP +PT E + + A G + VA+T
Sbjct: 495 SGKLFTWGDGDK-GRL----G-HGN-KEPKLVPTCVAALVEPNFCQVACGHSLTVALTTS 547
Query: 117 GEVYTWG 123
G VYT G
Sbjct: 548 GHVYTMG 554
Score = 61 (26.5 bits), Expect = 5.7e-13, Sum P(3) = 5.7e-13
Identities = 25/75 (33%), Positives = 35/75 (46%)
Query: 54 CG-F-AMAISDSRKLITWGSTDD--LGQSYVTSGKHGEIPEPFPLPTEASIVKA-AAGWA 108
CG F + A++ S L TWG D LG S H +P+ E V + A G
Sbjct: 367 CGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVS--HW-VPKRVNFLLEGIHVSSIACGPY 423
Query: 109 HCVAVTEGGEVYTWG 123
H VT G+++T+G
Sbjct: 424 HTAVVTSAGQLFTFG 438
Score = 58 (25.5 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 93 PLPTEASIV----KAAAGWAHCVAVTEGGEVYTWG 123
P E++IV A G H V VT+ GE ++WG
Sbjct: 299 PKALESTIVLDVQNIACGGQHAVLVTKQGESFSWG 333
Score = 39 (18.8 bits), Expect = 3.4e-14, Sum P(3) = 3.4e-14
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDI 239
GD+ P V G+R A G HT A+ ++
Sbjct: 448 GDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEV 483
>UNIPROTKB|F1N1N9 [details] [associations]
symbol:HERC5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050688 "regulation of defense response to virus"
evidence=IEA] [GO:0042296 "ISG15 ligase activity" evidence=IEA]
[GO:0032020 "ISG15-protein conjugation" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0050688 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:KDWITNT GO:GO:0042296
GO:GO:0032020 EMBL:DAAA02017014 IPI:IPI00907336
Ensembl:ENSBTAT00000052811 Uniprot:F1N1N9
Length = 959
Score = 200 (75.5 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 53/168 (31%), Positives = 80/168 (47%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVAAGLWH 363
I CG HS ++ G L +G L GQ G G S P V +L G+ + ++AG H
Sbjct: 153 ITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISAGEAH 212
Query: 364 TICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
++ +S G+VY+ + P ++A L++ + ++CG HTA++
Sbjct: 213 SMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEA--LDDQKVEFLACGGCHTALLTK 270
Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
G VF +G KYGQLG + P VT + G +ACG HTL
Sbjct: 271 SGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHTL 318
Score = 196 (74.1 bits), Expect = 4.6e-17, Sum P(2) = 4.6e-17
Identities = 58/195 (29%), Positives = 94/195 (48%)
Query: 274 SYGKDRSAALSRG-SVNSEGPGF--RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
S+G++ L G + N E P + V+ +ACGG H+A++T +G + TFG G YG
Sbjct: 224 SWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGCHTALLTKSGLVFTFGDGKYG 283
Query: 331 QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD-GDVYAXXXXXXXXXXXXXD 389
Q G ST +EL P V+ L+G ++ +A G HT+ SD G V++
Sbjct: 284 QLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHTLAYVSDTGKVFSFGSGKEGQLGNGGT 343
Query: 390 QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK-VFCWGWNKYGQLGLGDVIDRNI 448
+ + +PR + S E + S+S S + ++A + + W + + L R I
Sbjct: 344 RNQLIPRPMKLLSSEELKSES-STSVKELIMVAGGNQSILIWMEKENSYVNLR----RKI 398
Query: 449 PSQVTIEGCVPRNVA 463
P+ EG V R +A
Sbjct: 399 PT--LNEGTVKRWIA 411
Score = 183 (69.5 bits), Expect = 9.3e-14, Sum P(3) = 9.3e-14
Identities = 47/146 (32%), Positives = 74/146 (50%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
I+ G HS ++ +G + ++G GQ G G T ++ SP+C+ +L ++E +A G HT
Sbjct: 206 ISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGCHT 265
Query: 365 ICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIAD 423
++ G V+ Q E PRL+ L ++CG +HT A ++D
Sbjct: 266 ALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTG--LVGNRVTQIACGRQHTLAYVSD 323
Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIP 449
GKVF +G K GQLG G ++ IP
Sbjct: 324 TGKVFSFGSGKEGQLGNGGTRNQLIP 349
Score = 131 (51.2 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 33/118 (27%), Positives = 56/118 (47%)
Query: 357 VAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAET-LPRLLDAPSLENVHSKSVSCGA 415
+ G +H++ +S G+++A A T P +++ +L V +S G
Sbjct: 153 ITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVE--NLSGVPLVQISAGE 210
Query: 416 RHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLL 472
H+ ++ G V+ WG N GQLGLG ++ PS + ++ +ACG HT LL
Sbjct: 211 AHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGCHTALL 268
Score = 93 (37.8 bits), Expect = 4.6e-17, Sum P(2) = 4.6e-17
Identities = 24/78 (30%), Positives = 39/78 (50%)
Query: 54 CG--FAMAISDSRKLITWGSTDD--LGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAH 109
CG ++A+S +L WG D LG + + PE + +V+ +AG AH
Sbjct: 155 CGDYHSLALSKGGELFAWGQNLDGQLGVGRIFAST--STPEIVENLSGVPLVQISAGEAH 212
Query: 110 CVAVTEGGEVYTWGWKEC 127
+A++ G VY+WG +C
Sbjct: 213 SMALSMSGNVYSWGRNDC 230
Score = 72 (30.4 bits), Expect = 3.0e-15, Sum P(3) = 3.0e-15
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 97 EASIVKAAAGWAHCVAVTEGGEVYTWGWK--ECVPSGRVFGDLST 139
E +I++ G H +A+++GGE++ WG + GR+F ST
Sbjct: 147 EKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTST 191
Score = 44 (20.5 bits), Expect = 3.0e-15, Sum P(3) = 3.0e-15
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 212 PCLVTLNPGVRIATVAAGGRHTLALS 237
P +V GV + ++AG H++ALS
Sbjct: 192 PEIVENLSGVPLVQISAGEAHSMALS 217
Score = 40 (19.1 bits), Expect = 7.7e-15, Sum P(3) = 7.7e-15
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 268 IPCIESSYGKDRSAALSR-GSVNSEG 292
+P ++ S G+ S ALS G+V S G
Sbjct: 201 VPLVQISAGEAHSMALSMSGNVYSWG 226
>UNIPROTKB|E2RFW5 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 EMBL:AAEX03002773
GeneID:479225 KEGG:cfa:479225 RefSeq:XP_536367.2
Ensembl:ENSCAFT00000021404 Uniprot:E2RFW5
Length = 1049
Score = 204 (76.9 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 54/176 (30%), Positives = 84/176 (47%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
V+ + CG RH+ + D G + T G GQ G + + P V +L I V+ G
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93
Query: 362 WHTICISSDGDVYA-XXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
HT+ ++ G VYA ++ +PR + SL ++ V+CG H+
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLA 151
Query: 421 IADDGKVFCWGWNKYGQLGLG-DVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLAV 474
++ +VFCWG NKYGQLGLG D + P + ++ G VA G H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTL 207
Score = 202 (76.2 bits), Expect = 5.1e-17, Sum P(2) = 5.1e-17
Identities = 62/205 (30%), Positives = 88/205 (42%)
Query: 274 SYGKDRSAALSRGSVNSEGPGFRVPGNY-------VKGIACGGRHSAVITDAGALLTFGW 326
++G D L G + SE RVP N + +ACG HS ++ A + +G
Sbjct: 107 AWGLDSDGQL--GLLGSE-ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 327 GLYGQCGQG-STDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXX 385
YGQ G G + SP + SLLGI VAAG H+ ++ G ++
Sbjct: 164 NKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 386 XXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVID 445
+ +P LL SL + CG HTA + +G VF +G YGQLG
Sbjct: 224 LNDENDRYVPNLLK--SLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281
Query: 446 RNIPSQV-TIEGCVPRNVACGWWHT 469
P +V + G + +ACG HT
Sbjct: 282 EINPRKVFELMGSIVTQIACGRQHT 306
Score = 199 (75.1 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 54/176 (30%), Positives = 85/176 (48%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLY--GQCGQ-GSTDDELSPNCVSSLLGIQIEGVA 358
+ ++CG H+ + D G + + WGL GQ G GS + P + SL IQI VA
Sbjct: 86 IVAVSCGEAHTLALNDKGQV--YAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 359 AGLWHTICISSDGDVYAXXXXXXXXXXXXXD-QAETLPRLLDAPSLENVHSKSVSCGARH 417
G +H++ +S +V+ D + + P+L+ SL + V+ G H
Sbjct: 144 CGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIK--SLLGIPFMQVAAGGAH 201
Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLL 472
+ V+ G +F WG NK+GQLGL D DR +P+ + ++ + CG HT L
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAAL 257
Score = 181 (68.8 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 52/160 (32%), Positives = 78/160 (48%)
Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXX 378
+L +G +GQ G G D+E L P + ++ V GL HT+ + DG VY
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 379 XXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
+++ P + A +N+ +VSCG HT + D G+V+ WG + GQL
Sbjct: 61 NDLGQLGH--EKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 439 GL-GDV----IDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
GL G + RNI S I+ V VACG++H+L L+
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQ-IV--QVACGYYHSLALS 153
Score = 180 (68.4 bits), Expect = 1.3e-15, Sum P(3) = 1.3e-15
Identities = 50/164 (30%), Positives = 75/164 (45%)
Query: 305 IACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
+A GG HS V+T +GA+ FGWG +GQ G +D PN + SL +I + G
Sbjct: 195 VAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGED 252
Query: 363 HTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVI 421
HT ++ +G V+ E PR + L ++CG +HT A +
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF--ELMGSIVTQIACGRQHTSAFV 310
Query: 422 ADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEG-CVPRNVAC 464
G+++ +G GQLG G +R P T++G P N C
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSP--FTVKGNWFPYNGQC 352
Score = 101 (40.6 bits), Expect = 7.4e-07, Sum P(3) = 7.4e-07
Identities = 27/74 (36%), Positives = 38/74 (51%)
Query: 274 SYGKDRSAALSRGSVNSE-GPG--FRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLY 329
++G L S + E P F + G+ V IACG +H SA + +G + +FG G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Query: 330 GQCGQGSTDDELSP 343
GQ G GST + SP
Sbjct: 325 GQLGTGSTSNRKSP 338
Score = 93 (37.8 bits), Expect = 1.3e-15, Sum P(3) = 1.3e-15
Identities = 22/80 (27%), Positives = 42/80 (52%)
Query: 47 RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQ-SYVTSGKHGEIPEPFPLPTEASIVKA 103
+++ CG A +A++D ++ WG D GQ + S + +P ++ IV+
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSD-GQLGLLGSEECIRVPRNIKSLSDIQIVQV 142
Query: 104 AAGWAHCVAVTEGGEVYTWG 123
A G+ H +A+++ EV+ WG
Sbjct: 143 ACGYYHSLALSKASEVFCWG 162
Score = 87 (35.7 bits), Expect = 5.1e-17, Sum P(2) = 5.1e-17
Identities = 27/79 (34%), Positives = 39/79 (49%)
Query: 47 RDVCGGGCGF--AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
RDV GCG + + D + T G +DLGQ + K + PE +IV +
Sbjct: 37 RDV---GCGLRHTVFVLDDGTVYTCGC-NDLGQ--LGHEKSRKKPEQVVALDAQNIVAVS 90
Query: 105 AGWAHCVAVTEGGEVYTWG 123
G AH +A+ + G+VY WG
Sbjct: 91 CGEAHTLALNDKGQVYAWG 109
Score = 71 (30.1 bits), Expect = 7.1e-13, Sum P(2) = 7.1e-13
Identities = 27/114 (23%), Positives = 48/114 (42%)
Query: 14 VFMWGYLPGALPQRSPILSPLVVRLPLTVGSAWR-DVCGGGCGF--AMAISDSRKLITWG 70
V+ WG Q + S +R+P + S + CG+ ++A+S + ++ WG
Sbjct: 105 VYAWGLDSDG--QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG 162
Query: 71 STDDLGQSYV-TSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
+ GQ + K P+ ++ AAG AH +T G ++ WG
Sbjct: 163 Q-NKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWG 215
Score = 46 (21.3 bits), Expect = 1.3e-15, Sum P(3) = 1.3e-15
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 210 AFPCLVTLNPGVRIATVAAGGRHTLALS 237
A P L+ G+ VAAGG H+ L+
Sbjct: 179 ASPQLIKSLLGIPFMQVAAGGAHSFVLT 206
Score = 45 (20.9 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 13/35 (37%), Positives = 15/35 (42%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSD 238
G E P V I V+ G HTLAL+D
Sbjct: 67 GHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALND 101
Score = 43 (20.2 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS 237
G E P + ++I VA G H+LALS
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
>UNIPROTKB|E2RFV1 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 OMA:KLVIQPT
EMBL:AAEX03002773 RefSeq:XP_849808.1 Ensembl:ENSCAFT00000021413
GeneID:479225 KEGG:cfa:479225 NextBio:20854436 Uniprot:E2RFV1
Length = 1057
Score = 204 (76.9 bits), Expect = 5.7e-13, P = 5.7e-13
Identities = 54/176 (30%), Positives = 84/176 (47%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
V+ + CG RH+ + D G + T G GQ G + + P V +L I V+ G
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93
Query: 362 WHTICISSDGDVYA-XXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
HT+ ++ G VYA ++ +PR + SL ++ V+CG H+
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLA 151
Query: 421 IADDGKVFCWGWNKYGQLGLG-DVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLAV 474
++ +VFCWG NKYGQLGLG D + P + ++ G VA G H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTL 207
Score = 202 (76.2 bits), Expect = 5.2e-17, Sum P(2) = 5.2e-17
Identities = 62/205 (30%), Positives = 88/205 (42%)
Query: 274 SYGKDRSAALSRGSVNSEGPGFRVPGNY-------VKGIACGGRHSAVITDAGALLTFGW 326
++G D L G + SE RVP N + +ACG HS ++ A + +G
Sbjct: 107 AWGLDSDGQL--GLLGSE-ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 327 GLYGQCGQG-STDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXX 385
YGQ G G + SP + SLLGI VAAG H+ ++ G ++
Sbjct: 164 NKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 386 XXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVID 445
+ +P LL SL + CG HTA + +G VF +G YGQLG
Sbjct: 224 LNDENDRYVPNLLK--SLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281
Query: 446 RNIPSQV-TIEGCVPRNVACGWWHT 469
P +V + G + +ACG HT
Sbjct: 282 EINPRKVFELMGSIVTQIACGRQHT 306
Score = 199 (75.1 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 54/176 (30%), Positives = 85/176 (48%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLY--GQCGQ-GSTDDELSPNCVSSLLGIQIEGVA 358
+ ++CG H+ + D G + + WGL GQ G GS + P + SL IQI VA
Sbjct: 86 IVAVSCGEAHTLALNDKGQV--YAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 359 AGLWHTICISSDGDVYAXXXXXXXXXXXXXD-QAETLPRLLDAPSLENVHSKSVSCGARH 417
G +H++ +S +V+ D + + P+L+ SL + V+ G H
Sbjct: 144 CGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIK--SLLGIPFMQVAAGGAH 201
Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLL 472
+ V+ G +F WG NK+GQLGL D DR +P+ + ++ + CG HT L
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAAL 257
Score = 181 (68.8 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 52/160 (32%), Positives = 78/160 (48%)
Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXX 378
+L +G +GQ G G D+E L P + ++ V GL HT+ + DG VY
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 379 XXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
+++ P + A +N+ +VSCG HT + D G+V+ WG + GQL
Sbjct: 61 NDLGQLGH--EKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 439 GL-GDV----IDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
GL G + RNI S I+ V VACG++H+L L+
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQ-IV--QVACGYYHSLALS 153
Score = 180 (68.4 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 50/164 (30%), Positives = 75/164 (45%)
Query: 305 IACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
+A GG HS V+T +GA+ FGWG +GQ G +D PN + SL +I + G
Sbjct: 195 VAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGED 252
Query: 363 HTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVI 421
HT ++ +G V+ E PR + L ++CG +HT A +
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF--ELMGSIVTQIACGRQHTSAFV 310
Query: 422 ADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEG-CVPRNVAC 464
G+++ +G GQLG G +R P T++G P N C
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSP--FTVKGNWFPYNGQC 352
Score = 101 (40.6 bits), Expect = 7.6e-07, Sum P(3) = 7.6e-07
Identities = 27/74 (36%), Positives = 38/74 (51%)
Query: 274 SYGKDRSAALSRGSVNSE-GPG--FRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLY 329
++G L S + E P F + G+ V IACG +H SA + +G + +FG G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Query: 330 GQCGQGSTDDELSP 343
GQ G GST + SP
Sbjct: 325 GQLGTGSTSNRKSP 338
Score = 93 (37.8 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 22/80 (27%), Positives = 42/80 (52%)
Query: 47 RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQ-SYVTSGKHGEIPEPFPLPTEASIVKA 103
+++ CG A +A++D ++ WG D GQ + S + +P ++ IV+
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSD-GQLGLLGSEECIRVPRNIKSLSDIQIVQV 142
Query: 104 AAGWAHCVAVTEGGEVYTWG 123
A G+ H +A+++ EV+ WG
Sbjct: 143 ACGYYHSLALSKASEVFCWG 162
Score = 87 (35.7 bits), Expect = 5.2e-17, Sum P(2) = 5.2e-17
Identities = 27/79 (34%), Positives = 39/79 (49%)
Query: 47 RDVCGGGCGF--AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
RDV GCG + + D + T G +DLGQ + K + PE +IV +
Sbjct: 37 RDV---GCGLRHTVFVLDDGTVYTCGC-NDLGQ--LGHEKSRKKPEQVVALDAQNIVAVS 90
Query: 105 AGWAHCVAVTEGGEVYTWG 123
G AH +A+ + G+VY WG
Sbjct: 91 CGEAHTLALNDKGQVYAWG 109
Score = 71 (30.1 bits), Expect = 7.2e-13, Sum P(2) = 7.2e-13
Identities = 27/114 (23%), Positives = 48/114 (42%)
Query: 14 VFMWGYLPGALPQRSPILSPLVVRLPLTVGSAWR-DVCGGGCGF--AMAISDSRKLITWG 70
V+ WG Q + S +R+P + S + CG+ ++A+S + ++ WG
Sbjct: 105 VYAWGLDSDG--QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG 162
Query: 71 STDDLGQSYV-TSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
+ GQ + K P+ ++ AAG AH +T G ++ WG
Sbjct: 163 Q-NKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWG 215
Score = 46 (21.3 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 210 AFPCLVTLNPGVRIATVAAGGRHTLALS 237
A P L+ G+ VAAGG H+ L+
Sbjct: 179 ASPQLIKSLLGIPFMQVAAGGAHSFVLT 206
Score = 45 (20.9 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 13/35 (37%), Positives = 15/35 (42%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSD 238
G E P V I V+ G HTLAL+D
Sbjct: 67 GHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALND 101
Score = 43 (20.2 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS 237
G E P + ++I VA G H+LALS
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
>UNIPROTKB|E1BAV2 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0007283 GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 OMA:KLVIQPT
EMBL:DAAA02061808 EMBL:DAAA02061809 EMBL:DAAA02061810
IPI:IPI00839181 RefSeq:NP_001070362.2 UniGene:Bt.15687
Ensembl:ENSBTAT00000018639 GeneID:533336 KEGG:bta:533336
NextBio:20876005 ArrayExpress:E1BAV2 Uniprot:E1BAV2
Length = 1057
Score = 203 (76.5 bits), Expect = 7.3e-13, P = 7.3e-13
Identities = 53/176 (30%), Positives = 84/176 (47%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
V+ + CG RH+ + D G + T G GQ G + + P V +L I V+ G
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93
Query: 362 WHTICISSDGDVYA-XXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
HT+ ++ G VYA ++ +PR + SL ++ V+CG H+
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLA 151
Query: 421 IADDGKVFCWGWNKYGQLGLG-DVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLAV 474
++ +VFCWG NKYGQLGLG D + P + ++ G +A G H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTL 207
Score = 201 (75.8 bits), Expect = 6.7e-17, Sum P(2) = 6.7e-17
Identities = 61/205 (29%), Positives = 88/205 (42%)
Query: 274 SYGKDRSAALSRGSVNSEGPGFRVPGNY-------VKGIACGGRHSAVITDAGALLTFGW 326
++G D L G + SE RVP N + +ACG HS ++ A + +G
Sbjct: 107 AWGLDSDGQL--GLLGSE-ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 327 GLYGQCGQG-STDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXX 385
YGQ G G + SP + SLLGI +AAG H+ ++ G ++
Sbjct: 164 NKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 386 XXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVID 445
+ +P LL SL + CG HTA + +G VF +G YGQLG
Sbjct: 224 LNDENDRYVPNLLK--SLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281
Query: 446 RNIPSQV-TIEGCVPRNVACGWWHT 469
P +V + G + +ACG HT
Sbjct: 282 EINPRKVFELMGSIVTQIACGRQHT 306
Score = 198 (74.8 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 53/176 (30%), Positives = 85/176 (48%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLY--GQCGQ-GSTDDELSPNCVSSLLGIQIEGVA 358
+ ++CG H+ + D G + + WGL GQ G GS + P + SL IQI VA
Sbjct: 86 IVAVSCGEAHTLALNDKGQV--YAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 359 AGLWHTICISSDGDVYAXXXXXXXXXXXXXD-QAETLPRLLDAPSLENVHSKSVSCGARH 417
G +H++ +S +V+ D + + P+L+ SL + ++ G H
Sbjct: 144 CGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIK--SLLGIPFMQIAAGGAH 201
Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLL 472
+ V+ G +F WG NK+GQLGL D DR +P+ + ++ + CG HT L
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAAL 257
Score = 181 (68.8 bits), Expect = 1.3e-15, Sum P(3) = 1.3e-15
Identities = 51/164 (31%), Positives = 75/164 (45%)
Query: 305 IACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
IA GG HS V+T +GA+ FGWG +GQ G +D PN + SL +I + G
Sbjct: 195 IAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGED 252
Query: 363 HTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVI 421
HT ++ +G V+ E PR + L ++CG +HT A +
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF--ELMGSIVTQIACGRQHTSAFV 310
Query: 422 ADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEG-CVPRNVAC 464
G+++ +G GQLG G +R P T++G P N C
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGSTSNRKSP--FTVKGNWFPYNGQC 352
Score = 181 (68.8 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 52/160 (32%), Positives = 78/160 (48%)
Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXX 378
+L +G +GQ G G D+E L P + ++ V GL HT+ + DG VY
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 379 XXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
+++ P + A +N+ +VSCG HT + D G+V+ WG + GQL
Sbjct: 61 NDLGQLGH--EKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 439 GL-GDV----IDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
GL G + RNI S I+ V VACG++H+L L+
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQ-IV--QVACGYYHSLALS 153
Score = 101 (40.6 bits), Expect = 9.6e-07, Sum P(3) = 9.6e-07
Identities = 27/74 (36%), Positives = 38/74 (51%)
Query: 274 SYGKDRSAALSRGSVNSE-GPG--FRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLY 329
++G L S + E P F + G+ V IACG +H SA + +G + +FG G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Query: 330 GQCGQGSTDDELSP 343
GQ G GST + SP
Sbjct: 325 GQLGTGSTSNRKSP 338
Score = 93 (37.8 bits), Expect = 1.3e-15, Sum P(3) = 1.3e-15
Identities = 22/80 (27%), Positives = 42/80 (52%)
Query: 47 RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQ-SYVTSGKHGEIPEPFPLPTEASIVKA 103
+++ CG A +A++D ++ WG D GQ + S + +P ++ IV+
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSD-GQLGLLGSEECIRVPRNIKSLSDIQIVQV 142
Query: 104 AAGWAHCVAVTEGGEVYTWG 123
A G+ H +A+++ EV+ WG
Sbjct: 143 ACGYYHSLALSKASEVFCWG 162
Score = 87 (35.7 bits), Expect = 6.7e-17, Sum P(2) = 6.7e-17
Identities = 27/79 (34%), Positives = 39/79 (49%)
Query: 47 RDVCGGGCGF--AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
RDV GCG + + D + T G +DLGQ + K + PE +IV +
Sbjct: 37 RDV---GCGLRHTVFVLDDGTVYTCGC-NDLGQ--LGHEKSRKKPEQVVALDAQNIVAVS 90
Query: 105 AGWAHCVAVTEGGEVYTWG 123
G AH +A+ + G+VY WG
Sbjct: 91 CGEAHTLALNDKGQVYAWG 109
Score = 70 (29.7 bits), Expect = 7.0e-13, Sum P(2) = 7.0e-13
Identities = 27/114 (23%), Positives = 48/114 (42%)
Query: 14 VFMWGYLPGALPQRSPILSPLVVRLPLTVGSAWR-DVCGGGCGF--AMAISDSRKLITWG 70
V+ WG Q + S +R+P + S + CG+ ++A+S + ++ WG
Sbjct: 105 VYAWGLDSDG--QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG 162
Query: 71 STDDLGQSYV-TSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
+ GQ + K P+ ++ AAG AH +T G ++ WG
Sbjct: 163 Q-NKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWG 215
Score = 45 (20.9 bits), Expect = 1.3e-15, Sum P(3) = 1.3e-15
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 210 AFPCLVTLNPGVRIATVAAGGRHTLALS 237
A P L+ G+ +AAGG H+ L+
Sbjct: 179 ASPQLIKSLLGIPFMQIAAGGAHSFVLT 206
Score = 45 (20.9 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 13/35 (37%), Positives = 15/35 (42%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSD 238
G E P V I V+ G HTLAL+D
Sbjct: 67 GHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALND 101
Score = 43 (20.2 bits), Expect = 8.6e-15, Sum P(3) = 8.6e-15
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS 237
G E P + ++I VA G H+LALS
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
>UNIPROTKB|F1RW66 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:8916 KO:K10614 OMA:SPAVDFR
EMBL:FP015981 EMBL:CU915521 RefSeq:XP_003129374.3 UniGene:Ssc.42366
Ensembl:ENSSSCT00000010082 GeneID:100517903 KEGG:ssc:100517903
Uniprot:F1RW66
Length = 1050
Score = 207 (77.9 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 55/184 (29%), Positives = 89/184 (48%)
Query: 294 GFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ 353
GF + VK +ACGG HS + + G + T G GQ G ++ P + +L
Sbjct: 29 GF-ISDRSVKEVACGGDHSVFLLEDGEVYTCGLNTKGQLGHEREGNK--PEQIGALADEH 85
Query: 354 IEGVAAGLWHTICISSDGDVYA-XXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVS 412
I VA G H++ +S G +++ +++ +PRL+ + + + VS
Sbjct: 86 IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEESVAVPRLIQKLNQQTI--LQVS 143
Query: 413 CGARHTAVIADDGKVFCWGWNKYGQLGLG-DVIDRNIPSQV-TIEGCVPRNVACGWWHTL 470
CG H +A DG+ F WG N +GQLGLG + + P +V ++EG VA G H+
Sbjct: 144 CGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSF 203
Query: 471 LLAV 474
L++
Sbjct: 204 ALSL 207
Score = 205 (77.2 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 51/175 (29%), Positives = 84/175 (48%)
Query: 301 YVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVAA 359
++ +ACG HS ++D G L ++G G GQ G +T++ ++ P + L I V+
Sbjct: 85 HIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEESVAVPRLIQKLNQQTILQVSC 144
Query: 360 GLWHTICISSDGDVYAXXXXXXXXXXXXXD-QAETLPRLLDAPSLENVHSKSVSCGARHT 418
G WH + +++DG + + ++ P+ + SLE + V+ G H+
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVR--SLEGIPLAQVAAGGAHS 202
Query: 419 AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACGWWHTLLL 472
++ G VF WG N GQLGL D DR P V + ++CG HT +L
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRAQKVVYISCGEEHTAVL 257
Score = 187 (70.9 bits), Expect = 7.0e-17, Sum P(2) = 7.0e-17
Identities = 57/176 (32%), Positives = 79/176 (44%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDELSPNCVSSLLGIQIEGVAAGLWH 363
++CG H + G T+G +GQ G G + SP V SL GI + VAAG H
Sbjct: 142 VSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAH 201
Query: 364 TICISSDGDVYAXXXXXXXXXXXXXDQAETLP---RLLDAPSLENVHSKSVSCGARHTAV 420
+ +S G V+ ++ P +LL A + V+ +SCG HTAV
Sbjct: 202 SFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRAQKV--VY---ISCGEEHTAV 256
Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLAVP 475
+ G VF +G GQLG + D P +V + G +ACG HTL VP
Sbjct: 257 LTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAF-VP 311
Score = 156 (60.0 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 53/188 (28%), Positives = 83/188 (44%)
Query: 274 SYGKDRSAALSRGS-VNSEGPGFRV---PGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
++GK+ L G S+ RV G + +A GG HS ++ +GA+ FGWG+
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAV--FGWGMN 217
Query: 330 --GQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXX 387
GQ G +D SP V L ++ ++ G HT ++ G V+
Sbjct: 218 NAGQLGLSDEEDRESPCHVKLLRAQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHD 277
Query: 388 XDQAETLPRLLDAPSLENVHSK--SVSCGARHT-AVIADDGKVFCWGWNKYGQLGLGDVI 444
E PR + LE + S+ ++CG +HT A + G ++ +G GQLG G
Sbjct: 278 SMNDEVNPRRV----LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTC 333
Query: 445 DRNIPSQV 452
+ PS V
Sbjct: 334 NVKCPSPV 341
Score = 130 (50.8 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 42/155 (27%), Positives = 64/155 (41%)
Query: 326 WGLYGQCGQGSTDDELS-----PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXX 380
WG Y GQ L P + ++ VA G H++ + DG+VY
Sbjct: 4 WG-YWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGDHSVFLLEDGEVYTCGLNT 62
Query: 381 XXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL 440
++ P + A L + H V+CG H+ ++D G++F WG GQLGL
Sbjct: 63 KGQLGH--EREGNKPEQIGA--LADEHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGL 118
Query: 441 GDVIDR-NIPSQVT-IEGCVPRNVACGWWHTLLLA 473
+ +P + + V+CG WH L LA
Sbjct: 119 MTTEESVAVPRLIQKLNQQTILQVSCGNWHCLALA 153
Score = 102 (41.0 bits), Expect = 7.0e-17, Sum P(2) = 7.0e-17
Identities = 22/73 (30%), Positives = 41/73 (56%)
Query: 54 CG--FAMAISDSRKLITWGSTDDLGQ-SYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
CG ++A+SD +L +WG+ D GQ +T+ + +P + +I++ + G HC
Sbjct: 91 CGESHSLALSDRGQLFSWGAGSD-GQLGLMTTEESVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 111 VAVTEGGEVYTWG 123
+A+ G+ +TWG
Sbjct: 150 LALAADGQFFTWG 162
Score = 79 (32.9 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 29/110 (26%), Positives = 50/110 (45%)
Query: 17 WGYLPGALPQRSPILSPLVVRLPLTVGS-AWRDVCGGGCG--FAMAISDSRKLITWGSTD 73
WGY P S L +V P G + R V CG ++ + + ++ T G +
Sbjct: 4 WGYWSLGQPGISTNLQGIVAE-PQVCGFISDRSVKEVACGGDHSVFLLEDGEVYTCG-LN 61
Query: 74 DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
GQ + + G PE + IV A G +H +A+++ G++++WG
Sbjct: 62 TKGQ--LGHEREGNKPEQIGALADEHIVHVACGESHSLALSDRGQLFSWG 109
Score = 44 (20.5 bits), Expect = 7.3e-11, Sum P(2) = 7.3e-11
Identities = 10/16 (62%), Positives = 11/16 (68%)
Query: 223 IATVAAGGRHTLALSD 238
I VA G H+LALSD
Sbjct: 86 IVHVACGESHSLALSD 101
>TAIR|locus:2165770 [details] [associations]
symbol:AT5G42140 "AT5G42140" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005576
"extracellular region" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=ISS] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007165 "signal
transduction" evidence=ISS] [GO:0035091 "phosphatidylinositol
binding" evidence=ISS] InterPro:IPR000306 Pfam:PF01363
SMART:SM00064 INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0046872 EMBL:AB017067 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.30.40.10 InterPro:IPR017455
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 InterPro:IPR013591 Pfam:PF08381 PROSITE:PS51514
HSSP:Q15075 ProtClustDB:CLSN2686442 IPI:IPI00533393
RefSeq:NP_199029.1 UniGene:At.28039 ProteinModelPortal:Q9FHX1
SMR:Q9FHX1 PRIDE:Q9FHX1 EnsemblPlants:AT5G42140.1 GeneID:834219
KEGG:ath:AT5G42140 TAIR:At5g42140 HOGENOM:HOG000240974
InParanoid:Q9FHX1 OMA:RNEVFTW PhylomeDB:Q9FHX1
Genevestigator:Q9FHX1 Uniprot:Q9FHX1
Length = 1073
Score = 238 (88.8 bits), Expect = 4.6e-16, Sum P(2) = 4.6e-16
Identities = 56/170 (32%), Positives = 84/170 (49%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
V IACG +H+A+++ G + T+G G+ G G D P + SL I+ VA G
Sbjct: 274 VHHIACGVKHAALVSRQGEVFTWGEASGGRLGHGMGKDVTGPQLIESLAATSIDFVACGE 333
Query: 362 WHTICISSDGDVYA--XXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
+HT ++ G++Y D + +P+ + P LE + SVSCG HTA
Sbjct: 334 FHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIPKRISGP-LEGLQIASVSCGPWHTA 392
Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWH 468
+I G++F +G +G LG GD P +V ++ G VACG WH
Sbjct: 393 LITSTGQLFTFGDGTFGVLGHGDKETVFYPREVESLSGLRTIAVACGVWH 442
Score = 195 (73.7 bits), Expect = 8.7e-17, Sum P(3) = 8.7e-17
Identities = 50/156 (32%), Positives = 75/156 (48%)
Query: 311 HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
HS+ +G L T+G G + G G + L P CVS+L+ VA G T+ +++
Sbjct: 453 HSSSSVSSGKLFTWGDGDKSRLGHGDKEPRLKPTCVSALIDHTFHRVACGHSLTVGLTTS 512
Query: 371 GDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
G VY + LP L++ L + ++CGA H AV+ +VF W
Sbjct: 513 GKVYTMGSTVYGQLGNPNADGK-LPCLVE-DKLTKDCVEEIACGAYHVAVLTSRNEVFTW 570
Query: 431 GWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
G G+LG GDV DR P+ V ++ +N+ACG
Sbjct: 571 GKGANGRLGHGDVEDRKAPTLVDALKERHVKNIACG 606
Score = 184 (69.8 bits), Expect = 6.6e-15, Sum P(3) = 6.6e-15
Identities = 55/188 (29%), Positives = 78/188 (41%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
G + ++CG H+A+IT G L TFG G +G G G + P V SL G++ VA
Sbjct: 378 GLQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHGDKETVFYPREVESLSGLRTIAVA 437
Query: 359 AGLWHTICIS-----------SDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVH 407
G+WH I S G ++ + P + A H
Sbjct: 438 CGVWHAAAIVEVIVTHSSSSVSSGKLFTWGDGDKSRLGHGDKEPRLKPTCVSALIDHTFH 497
Query: 408 SKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT---IEGCVPRNVAC 464
V+CG T + GKV+ G YGQLG + D +P V + CV +AC
Sbjct: 498 R--VACGHSLTVGLTTSGKVYTMGSTVYGQLGNPNA-DGKLPCLVEDKLTKDCV-EEIAC 553
Query: 465 GWWHTLLL 472
G +H +L
Sbjct: 554 GAYHVAVL 561
Score = 161 (61.7 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 40/142 (28%), Positives = 67/142 (47%)
Query: 335 GSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETL 394
GS D L P + S + + + +A G+ H +S G+V+ + T
Sbjct: 255 GSRSDVLIPKPLESNVVLDVHHIACGVKHAALVSRQGEVFTWGEASGGRLGHGMGKDVTG 314
Query: 395 PRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKY--GQLGLGDVIDRNIPSQV 452
P+L++ SL V+CG HT + G+++ WG + G LG G + IP ++
Sbjct: 315 PQLIE--SLAATSIDFVACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIPKRI 372
Query: 453 T--IEGCVPRNVACGWWHTLLL 472
+ +EG +V+CG WHT L+
Sbjct: 373 SGPLEGLQIASVSCGPWHTALI 394
Score = 129 (50.5 bits), Expect = 2.3e-09, Sum P(3) = 2.3e-09
Identities = 34/118 (28%), Positives = 56/118 (47%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ-IEGVAAGLWH 363
+ACG + +T +G + T G +YGQ G + D +L P V L +E +A G +H
Sbjct: 499 VACGHSLTVGLTTSGKVYTMGSTVYGQLGNPNADGKL-PCLVEDKLTKDCVEEIACGAYH 557
Query: 364 TICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
++S +V+ + P L+DA L+ H K+++CG+ TA I
Sbjct: 558 VAVLTSRNEVFTWGKGANGRLGHGDVEDRKAPTLVDA--LKERHVKNIACGSNFTAAI 613
Score = 108 (43.1 bits), Expect = 4.4e-07, Sum P(3) = 4.4e-07
Identities = 24/68 (35%), Positives = 36/68 (52%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
V+ IACG H AV+T + T+G G G+ G G +D +P V +L ++ +A G
Sbjct: 548 VEEIACGAYHVAVLTSRNEVFTWGKGANGRLGHGDVEDRKAPTLVDALKERHVKNIACGS 607
Query: 362 WHT--ICI 367
T IC+
Sbjct: 608 NFTAAICL 615
Score = 91 (37.1 bits), Expect = 8.7e-17, Sum P(3) = 8.7e-17
Identities = 35/104 (33%), Positives = 43/104 (41%)
Query: 22 GALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGF--AMAISDSRKLITWGSTDDLGQSY 79
G L RS +L P PL + DV CG A +S ++ TWG G+
Sbjct: 252 GYLGSRSDVLIPK----PLE-SNVVLDVHHIACGVKHAALVSRQGEVFTWGEASG-GRLG 305
Query: 80 VTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
GK P+ SI A G H AVT GE+YTWG
Sbjct: 306 HGMGKDVTGPQLIESLAATSIDFVACGEFHTCAVTMTGEIYTWG 349
Score = 73 (30.8 bits), Expect = 6.0e-15, Sum P(3) = 6.0e-15
Identities = 27/79 (34%), Positives = 37/79 (46%)
Query: 69 WGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECV 128
+G+ ++G Y+ S IP+P + A G H V+ GEV+TWG E
Sbjct: 245 FGADKNIG--YLGSRSDVLIPKPLESNVVLDVHHIACGVKHAALVSRQGEVFTWG--EA- 299
Query: 129 PSGRVFGDLSTGTGLDKDV 147
SG G L G G+ KDV
Sbjct: 300 -SG---GRL--GHGMGKDV 312
Score = 65 (27.9 bits), Expect = 3.9e-14, Sum P(3) = 3.9e-14
Identities = 21/75 (28%), Positives = 35/75 (46%)
Query: 54 CG--FAMAISDSRKLITWGS-TDDLGQ-SYVTSGKHGEIPEPFPLPTEA-SIVKAAAGWA 108
CG A++ + ++ TWG T + G + T H IP+ P E I + G
Sbjct: 331 CGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHW-IPKRISGPLEGLQIASVSCGPW 389
Query: 109 HCVAVTEGGEVYTWG 123
H +T G+++T+G
Sbjct: 390 HTALITSTGQLFTFG 404
Score = 61 (26.5 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 25/67 (37%), Positives = 33/67 (49%)
Query: 63 SRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIV------KAAAGWAHCVAVTEG 116
S KL TWG D +S + G HG+ EP PT S + + A G + V +T
Sbjct: 460 SGKLFTWGDGD---KSRL--G-HGD-KEPRLKPTCVSALIDHTFHRVACGHSLTVGLTTS 512
Query: 117 GEVYTWG 123
G+VYT G
Sbjct: 513 GKVYTMG 519
Score = 43 (20.2 bits), Expect = 8.7e-17, Sum P(3) = 8.7e-17
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDI 239
GD+ +P V G+R VA G H A+ ++
Sbjct: 414 GDKETVFYPREVESLSGLRTIAVACGVWHAAAIVEV 449
Score = 39 (18.8 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 98 ASIVKAAAGWAHCVAVTEGGEVYTWG 123
A+IV+ H + G+++TWG
Sbjct: 444 AAIVEVIV--THSSSSVSSGKLFTWG 467
Score = 38 (18.4 bits), Expect = 4.6e-16, Sum P(2) = 4.6e-16
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 117 GEVYTWGWKECVPSGRVFGDLSTG-TGLDKDV 147
G+VY WG C + D + G G DV
Sbjct: 229 GDVYIWGEVLCENVTKFGADKNIGYLGSRSDV 260
Score = 37 (18.1 bits), Expect = 3.6e-16, Sum P(3) = 3.6e-16
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 220 GVRIATVAAGGRHTLALS 237
G++IA+V+ G HT ++
Sbjct: 378 GLQIASVSCGPWHTALIT 395
>UNIPROTKB|E2RMB0 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:8916 KO:K10614 OMA:SPAVDFR
EMBL:AAEX03016754 EMBL:AAEX03016753 RefSeq:XP_535653.3
Ensembl:ENSCAFT00000015540 GeneID:478475 KEGG:cfa:478475
Uniprot:E2RMB0
Length = 1050
Score = 207 (77.9 bits), Expect = 9.3e-17, Sum P(2) = 9.3e-17
Identities = 52/175 (29%), Positives = 84/175 (48%)
Query: 301 YVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVAA 359
++ +ACG HS ++D G L ++G G GQ G +T+D ++ P + L I V+
Sbjct: 85 HIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSC 144
Query: 360 GLWHTICISSDGDVYAXXXXXXXXXXXXXDQ-AETLPRLLDAPSLENVHSKSVSCGARHT 418
G WH + +++DG + + ++ P+ + SLE + V+ G H+
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEYPSQASPQRVR--SLEGIPLAQVAAGGAHS 202
Query: 419 AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPR-NVACGWWHTLLL 472
++ G VF WG N GQLGL D DR P V + ++CG HT +L
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVL 257
Score = 207 (77.9 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 55/184 (29%), Positives = 88/184 (47%)
Query: 294 GFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ 353
GF + VK +ACGG HS + + G + T G GQ G ++ P + +L
Sbjct: 29 GF-ISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK--PEQIGALADQH 85
Query: 354 IEGVAAGLWHTICISSDGDVYA-XXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVS 412
I VA G H++ +S G +++ + + +PRL+ + + + VS
Sbjct: 86 IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTI--LQVS 143
Query: 413 CGARHTAVIADDGKVFCWGWNKYGQLGLG-DVIDRNIPSQV-TIEGCVPRNVACGWWHTL 470
CG H +A DG+ F WG N +GQLGLG + + P +V ++EG VA G H+
Sbjct: 144 CGNWHCLALAADGQFFTWGKNSHGQLGLGKEYPSQASPQRVRSLEGIPLAQVAAGGAHSF 203
Query: 471 LLAV 474
L++
Sbjct: 204 ALSL 207
Score = 185 (70.2 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 54/173 (31%), Positives = 75/173 (43%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDELSPNCVSSLLGIQIEGVAAGLWH 363
++CG H + G T+G +GQ G G + SP V SL GI + VAAG H
Sbjct: 142 VSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEYPSQASPQRVRSLEGIPLAQVAAGGAH 201
Query: 364 TICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
+ +S G V+ ++ P + + V +SCG HTAV+
Sbjct: 202 SFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKV--VYISCGEEHTAVLTK 259
Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLAVP 475
G VF +G GQLG + D P +V + G +ACG HTL VP
Sbjct: 260 SGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAF-VP 311
Score = 156 (60.0 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 55/189 (29%), Positives = 84/189 (44%)
Query: 274 SYGKDRSAALSRGS-VNSEGPGFRV---PGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
++GK+ L G S+ RV G + +A GG HS ++ +GA+ FGWG+
Sbjct: 160 TWGKNSHGQLGLGKEYPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAV--FGWGMN 217
Query: 330 --GQCGQGSTDDELSPNCVSSLLGIQ-IEGVAAGLWHTICISSDGDVYAXXXXXXXXXXX 386
GQ G +D SP C LL Q + ++ G HT ++ G V+
Sbjct: 218 NAGQLGLSDEEDRESP-CHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276
Query: 387 XXDQAETLPRLLDAPSLENVHSK--SVSCGARHT-AVIADDGKVFCWGWNKYGQLGLGDV 443
E PR + LE + S+ ++CG +HT A + G ++ +G GQLG G
Sbjct: 277 DSMNDEVNPRRV----LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAKGQLGTGHT 332
Query: 444 IDRNIPSQV 452
+ PS V
Sbjct: 333 CNVKCPSPV 341
Score = 134 (52.2 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 43/155 (27%), Positives = 64/155 (41%)
Query: 326 WGLYGQCGQGSTDDELS-----PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXX 380
WG Y GQ L P + ++ VA G H++ + DG+VY
Sbjct: 4 WG-YWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 62
Query: 381 XXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL 440
++ P + A L + H V+CG H+ ++D G++F WG GQLGL
Sbjct: 63 KGQLGH--EREGNKPEQIGA--LADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGL 118
Query: 441 GDVIDR-NIPSQVT-IEGCVPRNVACGWWHTLLLA 473
D +P + + V+CG WH L LA
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA 153
Score = 101 (40.6 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 25/89 (28%), Positives = 47/89 (52%)
Query: 39 PLTVGS-AWRDVCGGGCG--FAMAISDSRKLITWGSTDDLGQ-SYVTSGKHGEIPEPFPL 94
P +G+ A + + CG ++A+SD +L +WG+ D GQ +T+ +P
Sbjct: 75 PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSD-GQLGLMTTEDSVAVPRLIQK 133
Query: 95 PTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
+ +I++ + G HC+A+ G+ +TWG
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWG 162
Score = 79 (32.9 bits), Expect = 9.3e-17, Sum P(2) = 9.3e-17
Identities = 29/110 (26%), Positives = 50/110 (45%)
Query: 17 WGYLPGALPQRSPILSPLVVRLPLTVGS-AWRDVCGGGCG--FAMAISDSRKLITWGSTD 73
WGY P S L +V P G + R V CG ++ + + ++ T G +
Sbjct: 4 WGYWSLGQPGISTNLQGIVAE-PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG-LN 61
Query: 74 DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
GQ + + G PE + IV A G +H +A+++ G++++WG
Sbjct: 62 TKGQ--LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWG 109
Score = 44 (20.5 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
Identities = 10/16 (62%), Positives = 11/16 (68%)
Query: 223 IATVAAGGRHTLALSD 238
I VA G H+LALSD
Sbjct: 86 IVHVACGESHSLALSD 101
>DICTYBASE|DDB_G0269934 [details] [associations]
symbol:DDB_G0269934 "Ras GTPase activation
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0051056 "regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0043547 "positive regulation of
GTPase activity" evidence=IEA] [GO:0035023 "regulation of Rho
protein signal transduction" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005096 "GTPase activator activity" evidence=IEA]
[GO:0005089 "Rho guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001936
InterPro:IPR008936 Pfam:PF00616 Pfam:PF00621 PROSITE:PS50010
PROSITE:PS50018 SMART:SM00323 dictyBase:DDB_G0269934
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0007165 EMBL:AAFI02000005
GO:GO:0005096 GO:GO:0043547 SUPFAM:SSF48350 GO:GO:0005622
GO:GO:0005089 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 Gene3D:1.10.506.10 eggNOG:COG5261
RefSeq:XP_646416.1 ProteinModelPortal:Q55CR5
EnsemblProtists:DDB0233497 GeneID:8617373 KEGG:ddi:DDB_G0269934
InParanoid:Q55CR5 OMA:SHTEYEN Uniprot:Q55CR5
Length = 2044
Score = 198 (74.8 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 60/196 (30%), Positives = 89/196 (45%)
Query: 274 SYGKDRSAALSRGSVNSEGPGFRVPG--NY-VKGIACGGRHSAVITDAGALLTFGWGLYG 330
S+G L G V +V Y V IA G H AV+T + +L FG G
Sbjct: 879 SWGASEYGQLGLGDVTQHSSPMQVSALEKYNVLQIASGSTHCAVLTTSKEVLVFGNG--- 935
Query: 331 QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQ 390
G+ P V SL + I+ + G + T I+ GDVY +
Sbjct: 936 -AAMGAASVVSLPTLVPSLKYLHIDRLCCGHYSTAAITECGDVYTWGTGQELGHGG--NS 992
Query: 391 AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
ET P+L++A L N + +SCG RHTA + D G++F G + +GQLG D+N P
Sbjct: 993 TETSPKLIEA--LRNQSIRQISCGGRHTAFLTDSGRIFTCGKDSFGQLGQMSG-DQNKPK 1049
Query: 451 QV-TIEGCVPRNVACG 465
++ ++ +V+CG
Sbjct: 1050 RIESLTKTTFISVSCG 1065
Score = 180 (68.4 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 51/186 (27%), Positives = 86/186 (46%)
Query: 293 PGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ-----CGQGSTDDELSPNCVS 347
P F +P + I+ G +S+V+T+ G + +G G G +D+L P +
Sbjct: 744 PNFNIPD--ICSISSGSYYSSVLTENGDVYLWGRGAVKTPAVPILGIPQIEDQLLPFKLE 801
Query: 348 SLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVH 407
SL + V+ G H + ++G++ + P+++ SL +
Sbjct: 802 SLS--DVVSVSIGFCHGAAVRANGELLTWGVGENGQLGHGDTNNQIEPKIIQ--SLTSFW 857
Query: 408 SKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGW 466
V CG +HT + +GKV+ WG ++YGQLGLGDV + P QV+ +E +A G
Sbjct: 858 ITQVQCGEKHTICLTKNGKVYSWGASEYGQLGLGDVTQHSSPMQVSALEKYNVLQIASGS 917
Query: 467 WHTLLL 472
H +L
Sbjct: 918 THCAVL 923
Score = 171 (65.3 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 51/203 (25%), Positives = 87/203 (42%)
Query: 274 SYGKDRSAALSRGSVNSE-GPGF--RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
++G + L G N++ P + ++ + CG +H+ +T G + ++G YG
Sbjct: 827 TWGVGENGQLGHGDTNNQIEPKIIQSLTSFWITQVQCGEKHTICLTKNGKVYSWGASEYG 886
Query: 331 QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQ 390
Q G G SP VS+L + +A+G H +++ +V
Sbjct: 887 QLGLGDVTQHSSPMQVSALEKYNVLQIASGSTHCAVLTTSKEVLVFGNGAAMGAASVV-- 944
Query: 391 AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
+LP L+ PSL+ +H + CG TA I + G V+ WG + +LG G P
Sbjct: 945 --SLPTLV--PSLKYLHIDRLCCGHYSTAAITECGDVYTWGTGQ--ELGHGGNSTETSPK 998
Query: 451 QV-TIEGCVPRNVACGWWHTLLL 472
+ + R ++CG HT L
Sbjct: 999 LIEALRNQSIRQISCGGRHTAFL 1021
Score = 159 (61.0 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 45/169 (26%), Positives = 77/169 (45%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
V ++ G H A + G LLT+G G GQ G G T++++ P + SL I V G
Sbjct: 806 VVSVSIGFCHGAAVRANGELLTWGVGENGQLGHGDTNNQIEPKIIQSLTSFWITQVQCGE 865
Query: 362 WHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
HTIC++ +G VY+ + P + A LE + ++ G+ H AV+
Sbjct: 866 KHTICLTKNGKVYSWGASEYGQLGLGDVTQHSSPMQVSA--LEKYNVLQIASGSTHCAVL 923
Query: 422 ADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
+V +G +G V+ ++P+ V +++ + CG + T
Sbjct: 924 TTSKEVLVFG--NGAAMGAASVV--SLPTLVPSLKYLHIDRLCCGHYST 968
Score = 117 (46.2 bits), Expect = 4.6e-07, Sum P(3) = 4.6e-07
Identities = 34/135 (25%), Positives = 56/135 (41%)
Query: 301 YVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAG 360
++ + CG +A IT+ G + T WG + G G E SP + +L I ++ G
Sbjct: 957 HIDRLCCGHYSTAAITECGDVYT--WGTGQELGHGGNSTETSPKLIEALRNQSIRQISCG 1014
Query: 361 LWHTICISSDGDVYA-XXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
HT ++ G ++ DQ + P+ ++ SL SVSCG +
Sbjct: 1015 GRHTAFLTDSGRIFTCGKDSFGQLGQMSGDQNK--PKRIE--SLTKTTFISVSCGENYNV 1070
Query: 420 VIADDGKVF----CW 430
+ D + F CW
Sbjct: 1071 ALFDTTRSFRDKFCW 1085
Score = 95 (38.5 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 40/133 (30%), Positives = 63/133 (47%)
Query: 14 VFMWGYLPGALPQRS-PILS-PLVVR--LPLTVGSAWRDVCGGGCGFA--MAISDSRKLI 67
V++WG GA+ + PIL P + LP + S DV GF A+ + +L+
Sbjct: 770 VYLWGR--GAVKTPAVPILGIPQIEDQLLPFKLESL-SDVVSVSIGFCHGAAVRANGELL 826
Query: 68 TWGSTDDLGQSYVTSGKHGEIPEPFPLPTEAS--IVKAAAGWAHCVAVTEGGEVYTWGWK 125
TWG ++ GQ + G EP + + S I + G H + +T+ G+VY+WG
Sbjct: 827 TWGVGEN-GQ--LGHGDTNNQIEPKIIQSLTSFWITQVQCGEKHTICLTKNGKVYSWGAS 883
Query: 126 ECVPSGRVFGDLS 138
E G GD++
Sbjct: 884 EYGQLG--LGDVT 894
Score = 93 (37.8 bits), Expect = 4.9e-16, Sum P(3) = 4.9e-16
Identities = 22/69 (31%), Positives = 33/69 (47%)
Query: 57 AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTE--ASIVKAAAGWAHCVAVT 114
A+ + SR L+TWGS + + + K P P LP I ++G + +T
Sbjct: 706 AIHLDTSRGLMTWGSASNCKLGFKVTAKDQSQPTPERLPNFNIPDICSISSGSYYSSVLT 765
Query: 115 EGGEVYTWG 123
E G+VY WG
Sbjct: 766 ENGDVYLWG 774
Score = 78 (32.5 bits), Expect = 6.2e-15, Sum P(2) = 6.2e-15
Identities = 19/64 (29%), Positives = 33/64 (51%)
Query: 91 PFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFER 150
PF L + + +V + G+ H AV GE+ TWG E +G++ G T ++ + +
Sbjct: 797 PFKLESLSDVVSVSIGFCHGAAVRANGELLTWGVGE---NGQL-GHGDTNNQIEPKIIQS 852
Query: 151 QSSF 154
+SF
Sbjct: 853 LTSF 856
Score = 68 (29.0 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 19/74 (25%), Positives = 37/74 (50%)
Query: 54 CG--FAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAH 109
CG + ++ + K+ +WG+++ LG VT +H P + ++++ A+G H
Sbjct: 863 CGEKHTICLTKNGKVYSWGASEYGQLGLGDVT--QHSS-PMQVSALEKYNVLQIASGSTH 919
Query: 110 CVAVTEGGEVYTWG 123
C +T EV +G
Sbjct: 920 CAVLTTSKEVLVFG 933
Score = 40 (19.1 bits), Expect = 4.9e-16, Sum P(3) = 4.9e-16
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS 237
GD N P ++ I V G +HT+ L+
Sbjct: 839 GDTNNQIEPKIIQSLTSFWITQVQCGEKHTICLT 872
>UNIPROTKB|A2VDP7 [details] [associations]
symbol:HERC3 "HERC3 protein" species:9913 "Bos taurus"
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00660000095216 CTD:8916
HOGENOM:HOG000208452 HOVERGEN:HBG050878 KO:K10614 OMA:SPAVDFR
OrthoDB:EOG4RBQHS EMBL:DAAA02017014 EMBL:BC133341 IPI:IPI00710875
RefSeq:NP_001077132.1 UniGene:Bt.85959 Ensembl:ENSBTAT00000013357
GeneID:510924 KEGG:bta:510924 InParanoid:A2VDP7 NextBio:20869685
Uniprot:A2VDP7
Length = 1050
Score = 203 (76.5 bits), Expect = 7.3e-13, P = 7.3e-13
Identities = 54/184 (29%), Positives = 87/184 (47%)
Query: 294 GFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ 353
GF + VK +ACGG HS + + G + T G GQ G ++ P + +L
Sbjct: 29 GF-ISDRSVKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNK--PEQIGALADQH 85
Query: 354 IEGVAAGLWHTICISSDGDVYA-XXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVS 412
I VA G H++ +S G +++ + + +PRL+ + + + VS
Sbjct: 86 IVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTIEDSVAVPRLIQKLNQQTI--LQVS 143
Query: 413 CGARHTAVIADDGKVFCWGWNKYGQLGLG-DVIDRNIPSQV-TIEGCVPRNVACGWWHTL 470
CG H +A DG+ F WG N +GQLGLG + + P +V ++EG V G H+
Sbjct: 144 CGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSF 203
Query: 471 LLAV 474
L++
Sbjct: 204 ALSL 207
Score = 198 (74.8 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 51/175 (29%), Positives = 82/175 (46%)
Query: 301 YVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVAA 359
++ +ACG HS ++D G L ++G G GQ G + +D ++ P + L I V+
Sbjct: 85 HIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTIEDSVAVPRLIQKLNQQTILQVSC 144
Query: 360 GLWHTICISSDGDVYAXXXXXXXXXXXXXD-QAETLPRLLDAPSLENVHSKSVSCGARHT 418
G WH + +++DG + + ++ P+ + SLE + V G H+
Sbjct: 145 GNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVR--SLEGIPLAQVVAGGAHS 202
Query: 419 AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPR-NVACGWWHTLLL 472
++ G VF WG N GQLGL D DR P V + ++CG HT +L
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVL 257
Score = 180 (68.4 bits), Expect = 8.8e-16, Sum P(2) = 8.8e-16
Identities = 53/173 (30%), Positives = 74/173 (42%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDELSPNCVSSLLGIQIEGVAAGLWH 363
++CG H + G T+G +GQ G G + SP V SL GI + V AG H
Sbjct: 142 VSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAH 201
Query: 364 TICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
+ +S G V+ ++ P + + V +SCG HTAV+
Sbjct: 202 SFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKV--VYISCGEEHTAVLTK 259
Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLAVP 475
G VF +G GQLG + D P +V + G +ACG HTL VP
Sbjct: 260 SGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAF-VP 311
Score = 152 (58.6 bits), Expect = 9.1e-14, Sum P(3) = 9.1e-14
Identities = 30/72 (41%), Positives = 45/72 (62%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
I+CG H+AV+T +G + TFG G GQ G S +DE++P V L+G ++ +A G HT
Sbjct: 247 ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT 306
Query: 365 IC-ISSDGDVYA 375
+ + S G +YA
Sbjct: 307 LAFVPSSGLIYA 318
Score = 139 (54.0 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 43/155 (27%), Positives = 65/155 (41%)
Query: 326 WGLYGQCGQGSTDDELS-----PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXX 380
WG Y GQ L P + ++ VA G H++ + DG+VY
Sbjct: 4 WG-YWSLGQPGISPNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGVNT 62
Query: 381 XXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL 440
++ P + A L + H V+CG H+ ++D G++F WG GQLGL
Sbjct: 63 KGQLGH--EREGNKPEQIGA--LADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGL 118
Query: 441 GDVIDR-NIPSQVT-IEGCVPRNVACGWWHTLLLA 473
+ D +P + + V+CG WH L LA
Sbjct: 119 MTIEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA 153
Score = 99 (39.9 bits), Expect = 8.8e-16, Sum P(2) = 8.8e-16
Identities = 25/89 (28%), Positives = 46/89 (51%)
Query: 39 PLTVGS-AWRDVCGGGCG--FAMAISDSRKLITWGSTDDLGQ-SYVTSGKHGEIPEPFPL 94
P +G+ A + + CG ++A+SD +L +WG+ D GQ +T +P
Sbjct: 75 PEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSD-GQLGLMTIEDSVAVPRLIQK 133
Query: 95 PTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
+ +I++ + G HC+A+ G+ +TWG
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWG 162
Score = 88 (36.0 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 30/110 (27%), Positives = 51/110 (46%)
Query: 17 WGYLPGALPQRSPILSPLVVRLPLTVGS-AWRDVCGGGCG--FAMAISDSRKLITWGSTD 73
WGY P SP L +V P G + R V CG ++ + + ++ T G +
Sbjct: 4 WGYWSLGQPGISPNLQGIVAE-PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG-VN 61
Query: 74 DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
GQ + + G PE + IV A G +H +A+++ G++++WG
Sbjct: 62 TKGQ--LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDQGQLFSWG 109
Score = 88 (36.0 bits), Expect = 7.6e-07, Sum P(3) = 7.6e-07
Identities = 26/77 (33%), Positives = 37/77 (48%)
Query: 274 SYGKDRSAALSRGSVNSEGPGFRV---PGNYVKGIACGGRHS-AVITDAGALLTFGWGLY 329
++G L S+N E RV G+ V IACG +H+ A + +G + FG G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAR 324
Query: 330 GQCGQGSTDDELSPNCV 346
GQ G G T + P+ V
Sbjct: 325 GQLGTGHTCNVKCPSPV 341
Score = 84 (34.6 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 23/79 (29%), Positives = 38/79 (48%)
Query: 49 VCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWA 108
V GG FA+++S + + WG ++ GQ ++ K E P L +V + G
Sbjct: 196 VAGGAHSFALSLSGA--VFGWGM-NNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252
Query: 109 HCVAVTEGGEVYTWGWKEC 127
H +T+ G V+T+G C
Sbjct: 253 HTAVLTKSGGVFTFGAGSC 271
Score = 61 (26.5 bits), Expect = 9.6e-09, Sum P(2) = 9.6e-09
Identities = 20/76 (26%), Positives = 33/76 (43%)
Query: 54 CG--FAMAISDSRKLITWGSTDD----LGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGW 107
CG +A++ + TWG LG+ + + + +P A +V AG
Sbjct: 144 CGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPL-AQVV---AGG 199
Query: 108 AHCVAVTEGGEVYTWG 123
AH A++ G V+ WG
Sbjct: 200 AHSFALSLSGAVFGWG 215
Score = 53 (23.7 bits), Expect = 9.1e-14, Sum P(3) = 9.1e-14
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 210 AFPCLVTLNPGVRIATVAAGGRHTLALS 237
A P V G+ +A V AGG H+ ALS
Sbjct: 179 ASPQRVRSLEGIPLAQVVAGGAHSFALS 206
Score = 44 (20.5 bits), Expect = 4.2e-12, Sum P(2) = 4.2e-12
Identities = 10/16 (62%), Positives = 11/16 (68%)
Query: 223 IATVAAGGRHTLALSD 238
I VA G H+LALSD
Sbjct: 86 IVHVACGESHSLALSD 101
Score = 42 (19.8 bits), Expect = 9.5e-06, Sum P(3) = 9.5e-06
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 205 DENLSAFPCLVTLNPGVRIATVAAGGRHTLALS 237
DE PC V L ++ ++ G HT L+
Sbjct: 226 DEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
>UNIPROTKB|Q15034 [details] [associations]
symbol:HERC3 "Probable E3 ubiquitin-protein ligase HERC3"
species:9606 "Homo sapiens" [GO:0016023 "cytoplasmic
membrane-bounded vesicle" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IBA] [GO:0005737 "cytoplasm" evidence=IDA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016023 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 EMBL:CH471057 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 EMBL:D25215 EMBL:AK289990
IPI:IPI00014216 RefSeq:NP_001258531.1 RefSeq:NP_055421.1
UniGene:Hs.35804 ProteinModelPortal:Q15034 SMR:Q15034 IntAct:Q15034
MINT:MINT-158126 STRING:Q15034 PhosphoSite:Q15034 DMDM:2495699
PaxDb:Q15034 PRIDE:Q15034 DNASU:8916 Ensembl:ENST00000264345
Ensembl:ENST00000402738 GeneID:8916 KEGG:hsa:8916 UCSC:uc003hrw.1
CTD:8916 GeneCards:GC04P089444 HGNC:HGNC:4876 HPA:HPA039170
MIM:605200 neXtProt:NX_Q15034 PharmGKB:PA29251 HOGENOM:HOG000208452
HOVERGEN:HBG050878 InParanoid:Q15034 KO:K10614 OMA:SPAVDFR
OrthoDB:EOG4RBQHS PhylomeDB:Q15034 ChiTaRS:HERC3 GenomeRNAi:8916
NextBio:33540 ArrayExpress:Q15034 Bgee:Q15034 CleanEx:HS_HERC3
Genevestigator:Q15034 Uniprot:Q15034
Length = 1050
Score = 206 (77.6 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 52/171 (30%), Positives = 82/171 (47%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVAAGLWH 363
+ACG HS ++D G L ++G G GQ G +T+D ++ P + L I V+ G WH
Sbjct: 89 VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH 148
Query: 364 TICISSDGDVYAXXXXXXXXXXXXXD-QAETLPRLLDAPSLENVHSKSVSCGARHTAVIA 422
+ +++DG + + ++ P+ + SLE + V+ G H+ ++
Sbjct: 149 CLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVR--SLEGIPLAQVAAGGAHSFALS 206
Query: 423 DDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPR-NVACGWWHTLLL 472
G VF WG N GQLGL D DR P V + ++CG HT +L
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVL 257
Score = 206 (77.6 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 55/184 (29%), Positives = 88/184 (47%)
Query: 294 GFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ 353
GF + VK +ACGG HS + + G + T G GQ G ++ P + +L
Sbjct: 29 GF-ISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK--PEQIGALADQH 85
Query: 354 IEGVAAGLWHTICISSDGDVYA-XXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVS 412
I VA G H++ +S G +++ + + +PRL+ + + + VS
Sbjct: 86 IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTI--LQVS 143
Query: 413 CGARHTAVIADDGKVFCWGWNKYGQLGLG-DVIDRNIPSQV-TIEGCVPRNVACGWWHTL 470
CG H +A DG+ F WG N +GQLGLG + + P +V ++EG VA G H+
Sbjct: 144 CGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSF 203
Query: 471 LLAV 474
L++
Sbjct: 204 ALSL 207
Score = 184 (69.8 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 54/173 (31%), Positives = 75/173 (43%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDELSPNCVSSLLGIQIEGVAAGLWH 363
++CG H + G T+G +GQ G G + SP V SL GI + VAAG H
Sbjct: 142 VSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAH 201
Query: 364 TICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
+ +S G V+ ++ P + + V +SCG HTAV+
Sbjct: 202 SFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKV--VYISCGEEHTAVLTK 259
Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLAVP 475
G VF +G GQLG + D P +V + G +ACG HTL VP
Sbjct: 260 SGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAF-VP 311
Score = 153 (58.9 bits), Expect = 5.5e-13, Sum P(2) = 5.5e-13
Identities = 55/189 (29%), Positives = 83/189 (43%)
Query: 274 SYGKDRSAALSRGS-VNSEGPGFRV---PGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
++GK+ L G S+ RV G + +A GG HS ++ +GA+ FGWG+
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAV--FGWGMN 217
Query: 330 --GQCGQGSTDDELSPNCVSSLLGIQ-IEGVAAGLWHTICISSDGDVYAXXXXXXXXXXX 386
GQ G D SP C LL Q + ++ G HT ++ G V+
Sbjct: 218 NAGQLGLSDEKDRESP-CHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276
Query: 387 XXDQAETLPRLLDAPSLENVHSK--SVSCGARHT-AVIADDGKVFCWGWNKYGQLGLGDV 443
E PR + LE + S+ ++CG +HT A + G ++ +G GQLG G
Sbjct: 277 DSMNDEVNPRRV----LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 444 IDRNIPSQV 452
+ PS V
Sbjct: 333 CNVKCPSPV 341
Score = 133 (51.9 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 43/155 (27%), Positives = 64/155 (41%)
Query: 326 WGLYGQCGQGSTDDELS-----PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXX 380
WG Y GQ L P + ++ VA G H++ + DG+VY
Sbjct: 4 WG-YWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 62
Query: 381 XXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL 440
++ P + A L + H V+CG H+ ++D G++F WG GQLGL
Sbjct: 63 KGQLGH--EREGNKPEQIGA--LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGL 118
Query: 441 GDVIDR-NIPSQVT-IEGCVPRNVACGWWHTLLLA 473
D +P + + V+CG WH L LA
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA 153
Score = 101 (40.6 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 25/89 (28%), Positives = 47/89 (52%)
Query: 39 PLTVGS-AWRDVCGGGCG--FAMAISDSRKLITWGSTDDLGQ-SYVTSGKHGEIPEPFPL 94
P +G+ A + + CG ++A+SD +L +WG+ D GQ +T+ +P
Sbjct: 75 PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD-GQLGLMTTEDSVAVPRLIQK 133
Query: 95 PTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
+ +I++ + G HC+A+ G+ +TWG
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWG 162
Score = 78 (32.5 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 28/110 (25%), Positives = 50/110 (45%)
Query: 17 WGYLPGALPQRSPILSPLVVRLPLTVGS-AWRDVCGGGCG--FAMAISDSRKLITWGSTD 73
WGY P S L +V P G + R V CG ++ + + ++ T G +
Sbjct: 4 WGYWSLGQPGISTNLQGIVAE-PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG-LN 61
Query: 74 DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
GQ + + G PE + I+ A G +H +A+++ G++++WG
Sbjct: 62 TKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG 109
Score = 43 (20.2 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 10/16 (62%), Positives = 11/16 (68%)
Query: 223 IATVAAGGRHTLALSD 238
I VA G H+LALSD
Sbjct: 86 IIHVACGESHSLALSD 101
>UNIPROTKB|Q8IVU3 [details] [associations]
symbol:HERC6 "Probable E3 ubiquitin-protein ligase HERC6"
species:9606 "Homo sapiens" [GO:0005829 "cytosol" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 HOVERGEN:HBG050878 HSSP:Q9UEP9 EMBL:AF336798
EMBL:AY653201 EMBL:AK000644 EMBL:AK092403 EMBL:AK295832
EMBL:BC035775 EMBL:BC042047 EMBL:AL833664 EMBL:BX647121
IPI:IPI00168048 IPI:IPI00455627 IPI:IPI00554785
RefSeq:NP_001158608.1 RefSeq:NP_060382.3 UniGene:Hs.529317
ProteinModelPortal:Q8IVU3 SMR:Q8IVU3 IntAct:Q8IVU3 STRING:Q8IVU3
PhosphoSite:Q8IVU3 DMDM:74750679 PaxDb:Q8IVU3 PRIDE:Q8IVU3
Ensembl:ENST00000264346 Ensembl:ENST00000273960
Ensembl:ENST00000380265 GeneID:55008 KEGG:hsa:55008 UCSC:uc011cdi.2
UCSC:uc011cdj.2 CTD:55008 GeneCards:GC04P089299 HGNC:HGNC:26072
HPA:HPA035846 MIM:609249 neXtProt:NX_Q8IVU3 PharmGKB:PA134894313
InParanoid:Q8IVU3 OMA:HIFAGTY GenomeRNAi:55008 NextBio:58353
ArrayExpress:Q8IVU3 Bgee:Q8IVU3 Genevestigator:Q8IVU3
Uniprot:Q8IVU3
Length = 1022
Score = 204 (76.9 bits), Expect = 3.9e-16, Sum P(2) = 3.9e-16
Identities = 54/169 (31%), Positives = 81/169 (47%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDELSPNCVSSLLGIQIEGVAAGLWH 363
++CG HS ++ + ++G +GQ G G + SP V SL GI + VAAG H
Sbjct: 133 VSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAH 192
Query: 364 TICISSDGDVYAXXXXXXXXXXXXXDQAETLP-RLLDAPSLENVHSKSVSCGARHTAVIA 422
+ +S G + + L +L+N+ +SCG HTAV+
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLT 252
Query: 423 DDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
DGKVF +G N+ GQLG ++ P V I+G V + + CG +HTL
Sbjct: 253 QDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQ-IDCGSYHTL 300
Score = 169 (64.5 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 51/181 (28%), Positives = 87/181 (48%)
Query: 298 PGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ-GSTDDELSPNCVSSLLGIQIEG 356
PG + A G RHS ++ +L+ G GQ G+ G+ EL P + +L + ++
Sbjct: 21 PGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGEL-PEPIQALETLIVDL 79
Query: 357 VAAGLWHTICISSDGDVYA-XXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGA 415
V+ G H++ + G V+A + P+ + +L ++ VSCG
Sbjct: 80 VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKI--MTLNDIKIIQVSCGH 137
Query: 416 RHTAVIADDGKVFCWGWNKYGQLGLG-DVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLA 473
H+ ++ D +VF WG N +GQLGLG + + P +V ++EG VA G H+ L+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 197
Query: 474 V 474
+
Sbjct: 198 L 198
Score = 76 (31.8 bits), Expect = 3.9e-16, Sum P(2) = 3.9e-16
Identities = 23/86 (26%), Positives = 39/86 (45%)
Query: 41 TVGSAWRDVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEA 98
T GS ++ G ++ + + ++++ G + GQ + GE+PEP E
Sbjct: 17 TAGSPGAELLQAASGERHSLLLLTNHRVLSCGD-NSRGQLGRRGAQRGELPEPIQA-LET 74
Query: 99 SIVK-AAAGWAHCVAVTEGGEVYTWG 123
IV + G H +AV G V+ WG
Sbjct: 75 LIVDLVSCGKEHSLAVCHKGRVFAWG 100
Score = 73 (30.8 bits), Expect = 8.0e-16, Sum P(2) = 8.0e-16
Identities = 18/75 (24%), Positives = 39/75 (52%)
Query: 54 CG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEI---PEPFPLPTEASIVKAAAGWA 108
CG ++A+ ++ WG+ + GQ + G+ EI P+ + I++ + G
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSE-GQLGI--GEFKEISFTPKKIMTLNDIKIIQVSCGHY 138
Query: 109 HCVAVTEGGEVYTWG 123
H +A+++ +V++WG
Sbjct: 139 HSLALSKDSQVFSWG 153
Score = 45 (20.9 bits), Expect = 6.5e-13, Sum P(2) = 6.5e-13
Identities = 22/84 (26%), Positives = 32/84 (38%)
Query: 218 NPGVRIATVAAGGRHTLALSDIXXXXXXXXXXXXXXXXXSRIRMVSSPHPIPCIES---- 273
+PG + A+G RH+L L R P PI +E+
Sbjct: 20 SPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRG-ELPEPIQALETLIVD 78
Query: 274 --SYGKDRSAALS-RGSVNSEGPG 294
S GK+ S A+ +G V + G G
Sbjct: 79 LVSCGKEHSLAVCHKGRVFAWGAG 102
>RGD|1306366 [details] [associations]
symbol:Herc1 "HECT and RLD domain containing E3 ubiquitin
protein ligase family member 1" species:10116 "Rattus norvegicus"
[GO:0010507 "negative regulation of autophagy" evidence=ISO]
[GO:0021702 "cerebellar Purkinje cell differentiation"
evidence=ISO] [GO:0031175 "neuron projection development"
evidence=ISO] [GO:0050885 "neuromuscular process controlling
balance" evidence=ISO] RGD:1306366 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 OrthoDB:EOG40GCPW
GeneTree:ENSGT00700000104312 IPI:IPI00765979
Ensembl:ENSRNOT00000049300 UCSC:RGD:1306366 Uniprot:D3Z9N9
Length = 1203
Score = 179 (68.1 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 48/172 (27%), Positives = 86/172 (50%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW-- 362
I G + VI+ G++ G G YG+ G G ++++ + ++ I+ V++
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSD 467
Query: 363 -HTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
HT+ +++G+V++ + P+L+ P L+ VS G RH+A +
Sbjct: 468 GHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCVSAGYRHSAAV 526
Query: 422 ADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
+DG+++ WG +G+LG GD RNIP+ V V V+CG HT+ L+
Sbjct: 527 TEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGE-VSCGSSHTIALS 577
Score = 176 (67.0 bits), Expect = 5.1e-16, Sum P(2) = 5.1e-16
Identities = 55/208 (26%), Positives = 94/208 (45%)
Query: 274 SYGKDRSAALSRGSVNSEG-PGFRVPGNYVKGIACGGRHSAVIT-DAGALLTFGWGLYGQ 331
++G+ L G NS P + V ++CG H+ ++ D + +FG G G+
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 332 CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQA 391
G G T+ P + +L G+ I V AG ++ ++S G VYA +A
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS--EA 651
Query: 392 ETL-PRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR-NIP 449
L P+L++ L +S G H ++ D +V+ WG N GQ G G+ P
Sbjct: 652 TALRPKLIE--ELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKP 709
Query: 450 SQVT-IEGCVPRNVACGWWHTLL-LAVP 475
+V+ ++G + ++ G H+L A+P
Sbjct: 710 KKVSGLDGIAIQQISAGTSHSLAWTALP 737
Score = 149 (57.5 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 39/142 (27%), Positives = 69/142 (48%)
Query: 291 EGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLL 350
+GP + G V ++ G RHSA +T+ G L T+G G +G+ G G ++ P V +
Sbjct: 505 QGP---LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS 561
Query: 351 GIQIEGVAAGLWHTICISSDG-DVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSK 409
+ E V+ G HTI +S DG V++ P++++A L+ + +
Sbjct: 562 NVG-E-VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEA--LQGMFIR 617
Query: 410 SVSCGARHTAVIADDGKVFCWG 431
V G++ + + G+V+ WG
Sbjct: 618 KVCAGSQSSLALTSTGQVYAWG 639
Score = 107 (42.7 bits), Expect = 5.1e-16, Sum P(2) = 5.1e-16
Identities = 25/74 (33%), Positives = 41/74 (55%)
Query: 52 GGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAH 109
G G +A + ++ +WG D LG ++ K+ ++ + PL + +V +AG+ H
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQG-PLQGKV-VVCVSAGYRH 522
Query: 110 CVAVTEGGEVYTWG 123
AVTE GE+YTWG
Sbjct: 523 SAAVTEDGELYTWG 536
Score = 42 (19.8 bits), Expect = 5.9e-09, Sum P(3) = 5.9e-09
Identities = 11/37 (29%), Positives = 21/37 (56%)
Query: 204 GDENLSAFPCLVTLNP--GVRIATVAAGGRHTLALSD 238
G+ + +P L+ P G + V+AG RH+ A+++
Sbjct: 493 GNSSTQKYPKLIQ-GPLQGKVVVCVSAGYRHSAAVTE 528
Score = 38 (18.4 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 113 VTEGGEVYTWG 123
V+E EVY WG
Sbjct: 368 VSETCEVYVWG 378
>UNIPROTKB|Q9UII4 [details] [associations]
symbol:HERC5 "E3 ISG15--protein ligase HERC5" species:9606
"Homo sapiens" [GO:0051607 "defense response to virus"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0005737
"cytoplasm" evidence=IBA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IBA] [GO:0032020 "ISG15-protein conjugation" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042296 "ISG15
ligase activity" evidence=IDA] [GO:0050688 "regulation of defense
response to virus" evidence=IDA] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0019221
"cytokine-mediated signaling pathway" evidence=TAS] [GO:0032480
"negative regulation of type I interferon production" evidence=TAS]
[GO:0045087 "innate immune response" evidence=TAS] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 EMBL:AY337518
EMBL:AB027289 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829
GO:GO:0005634 GO:GO:0048471 Reactome:REACT_6900 GO:GO:0000079
GO:GO:0045087 GO:GO:0019221 GO:GO:0051607 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
GO:GO:0032480 GO:GO:0050688 SUPFAM:SSF56204 eggNOG:COG5021
HOGENOM:HOG000208452 HOVERGEN:HBG050878 EMBL:AC083829 EMBL:BC140716
IPI:IPI00008821 RefSeq:NP_057407.2 UniGene:Hs.26663
ProteinModelPortal:Q9UII4 SMR:Q9UII4 DIP:DIP-44200N IntAct:Q9UII4
STRING:Q9UII4 PhosphoSite:Q9UII4 DMDM:296434523 PaxDb:Q9UII4
PRIDE:Q9UII4 Ensembl:ENST00000264350 GeneID:51191 KEGG:hsa:51191
UCSC:uc003hrt.3 CTD:51191 GeneCards:GC04P089378 H-InvDB:HIX0200636
HGNC:HGNC:24368 HPA:HPA043929 MIM:608242 neXtProt:NX_Q9UII4
PharmGKB:PA134973940 InParanoid:Q9UII4 OMA:KDWITNT
OrthoDB:EOG4N30N6 PhylomeDB:Q9UII4 GenomeRNAi:51191 NextBio:54182
ArrayExpress:Q9UII4 Bgee:Q9UII4 CleanEx:HS_HERC5
Genevestigator:Q9UII4 GermOnline:ENSG00000138646 GO:GO:0042296
GO:GO:0032020 Uniprot:Q9UII4
Length = 1024
Score = 224 (83.9 bits), Expect = 3.2e-15, P = 3.2e-15
Identities = 51/168 (30%), Positives = 83/168 (49%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDELSPNCVSSLLGIQIEGVAAGLWH 363
I CG HS ++ G L +G L+GQ G G +P V L G+ + ++AG H
Sbjct: 143 ITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAH 202
Query: 364 TICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
++ +S G++Y+ +++ P L++ L+N + V+CG H+A++
Sbjct: 203 SMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEG--LDNQKVEFVACGGSHSALLTQ 260
Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
DG +F +G K+GQLG + P V + G +ACG WHTL
Sbjct: 261 DGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTL 308
Score = 199 (75.1 bits), Expect = 5.6e-16, Sum P(2) = 5.6e-16
Identities = 57/194 (29%), Positives = 89/194 (45%)
Query: 274 SYGKDRSAALSRGSVNSEGPGFRVPG--NY-VKGIACGGRHSAVITDAGALLTFGWGLYG 330
S+GK+ L G S+ + G N V+ +ACGG HSA++T G L TFG G +G
Sbjct: 214 SWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHG 273
Query: 331 QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD-GDVYAXXXXXXXXXXXXXD 389
Q G ST +EL P V+ L+G ++ +A G WHT+ SD G V++
Sbjct: 274 QLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGT 333
Query: 390 QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIP 449
+ + +P + S E + +S + + + + W + + L R IP
Sbjct: 334 RDQLMPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWIKKENSYVNL----KRTIP 389
Query: 450 SQVTIEGCVPRNVA 463
+ EG V R +A
Sbjct: 390 T--LNEGTVKRWIA 401
Score = 167 (63.8 bits), Expect = 1.6e-11, Sum P(3) = 1.6e-11
Identities = 45/151 (29%), Positives = 72/151 (47%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
I+ G HS ++ +G + ++G GQ G G T+ + P+ + L ++E VA G H+
Sbjct: 196 ISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHS 255
Query: 365 ICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIAD 423
++ DG ++ Q E P L+ L ++CG HT A ++D
Sbjct: 256 ALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLV--AELVGYRVTQIACGRWHTLAYVSD 313
Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI 454
GKVF +G K GQLG G D+ +P V +
Sbjct: 314 LGKVFSFGSGKDGQLGNGGTRDQLMPLPVKV 344
Score = 127 (49.8 bits), Expect = 0.00016, P = 0.00016
Identities = 31/118 (26%), Positives = 57/118 (48%)
Query: 357 VAAGLWHTICISSDGDVYAXXXXXXXXXXXXXD-QAETLPRLLDAPSLENVHSKSVSCGA 415
+ G +H++ +S G+++A + T P++++ L V +S G
Sbjct: 143 ITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVE--HLAGVPLAQISAGE 200
Query: 416 RHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
H+ ++ G ++ WG N+ GQLGLG ++ PS + ++ VACG H+ LL
Sbjct: 201 AHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALL 258
Score = 80 (33.2 bits), Expect = 5.6e-16, Sum P(2) = 5.6e-16
Identities = 25/78 (32%), Positives = 37/78 (47%)
Query: 54 CG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKA--AAGWAH 109
CG ++A+S +L WG GQ V K P + A + A +AG AH
Sbjct: 145 CGDYHSLALSKGGELFAWGQNLH-GQLGV-GRKFPSTTTPQIVEHLAGVPLAQISAGEAH 202
Query: 110 CVAVTEGGEVYTWGWKEC 127
+A++ G +Y+WG EC
Sbjct: 203 SMALSMSGNIYSWGKNEC 220
Score = 64 (27.6 bits), Expect = 3.5e-15, Sum P(3) = 3.5e-15
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 97 EASIVKAAAGWAHCVAVTEGGEVYTWG 123
E I++ G H +A+++GGE++ WG
Sbjct: 137 EKKIIQITCGDYHSLALSKGGELFAWG 163
Score = 49 (22.3 bits), Expect = 3.5e-15, Sum P(3) = 3.5e-15
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 212 PCLVTLNPGVRIATVAAGGRHTLALS 237
P +V GV +A ++AG H++ALS
Sbjct: 182 PQIVEHLAGVPLAQISAGEAHSMALS 207
>TAIR|locus:2025277 [details] [associations]
symbol:PRAF1 "AT1G76950" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=ISS]
[GO:0008536 "Ran GTPase binding" evidence=ISS] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR000306 Pfam:PF01363
SMART:SM00064 INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0046872
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR013591 Pfam:PF08381
PROSITE:PS51514 HSSP:Q15075 EMBL:AF323270 IPI:IPI00521580
RefSeq:NP_565144.1 UniGene:At.19186 ProteinModelPortal:Q947D2
SMR:Q947D2 PRIDE:Q947D2 EnsemblPlants:AT1G76950.1 GeneID:844030
KEGG:ath:AT1G76950 TAIR:At1g76950 InParanoid:Q947D2 OMA:WIPKRIA
PhylomeDB:Q947D2 ProtClustDB:CLSN2686442 Genevestigator:Q947D2
Uniprot:Q947D2
Length = 1103
Score = 237 (88.5 bits), Expect = 6.5e-16, Sum P(2) = 6.5e-16
Identities = 60/172 (34%), Positives = 86/172 (50%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ-IEGVAAG 360
V IACG RH+A +T G + T+G G+ G G D P V SL ++ VA G
Sbjct: 283 VHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVACG 342
Query: 361 LWHTICISSDGDVYA--XXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
+HT ++ G++Y D + +P+ + A SLE +H SVSCG HT
Sbjct: 343 EFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRI-AGSLEGLHVASVSCGPWHT 401
Query: 419 AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
A+I G++F +G +G LG GD P +V ++ G V+CG WHT
Sbjct: 402 ALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLRTIAVSCGVWHT 453
Score = 180 (68.4 bits), Expect = 5.4e-15, Sum P(4) = 5.4e-15
Identities = 44/158 (27%), Positives = 75/158 (47%)
Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXX 377
+G L T+G G + G G D L P CV +L+ +A G T+ +++ G V+
Sbjct: 471 SGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIACGHSLTVGLTTSGQVFTMG 530
Query: 378 XXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQ 437
+ LP L++ L + + +SCGA H A + +V+ WG G+
Sbjct: 531 STVYGQLGNLQTDGK-LPCLVE-DKLASEFVEEISCGAYHVAALTSRNEVYTWGKGANGR 588
Query: 438 LGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLAV 474
LG GD+ DR +P+ V ++ + +ACG +T + +
Sbjct: 589 LGHGDLEDRKVPTIVEALKDRHVKYIACGSNYTAAICL 626
Score = 177 (67.4 bits), Expect = 7.4e-14, Sum P(3) = 7.4e-14
Identities = 53/186 (28%), Positives = 80/186 (43%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
G +V ++CG H+A+IT G L TFG G +G G G + P V SL G++ V+
Sbjct: 388 GLHVASVSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLRTIAVS 447
Query: 359 AGLWHTICI-------SSDGDVYAXXXXX-XXXXXXXXDQAETLPRLLDA--PSLENVHS 408
G+WHT + S+ V + + PRL P+L + +
Sbjct: 448 CGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNF 507
Query: 409 KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT--IEGCVPRNVACGW 466
++CG T + G+VF G YGQLG D +P V + ++CG
Sbjct: 508 HKIACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQT-DGKLPCLVEDKLASEFVEEISCGA 566
Query: 467 WHTLLL 472
+H L
Sbjct: 567 YHVAAL 572
Score = 141 (54.7 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 38/139 (27%), Positives = 65/139 (46%)
Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLL 398
D L P + S + + + +A G+ H ++ G+++ + PRL+
Sbjct: 268 DVLVPKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRLV 327
Query: 399 DAPSLENVHSKS-VSCGARHTAVIADDGKVFCWG--WNKYGQLGLGDVIDRNIPSQV--T 453
+ SL S V+CG HT + G+++ WG + G LG G I IP ++ +
Sbjct: 328 E--SLTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGS 385
Query: 454 IEGCVPRNVACGWWHTLLL 472
+EG +V+CG WHT L+
Sbjct: 386 LEGLHVASVSCGPWHTALI 404
Score = 138 (53.6 bits), Expect = 3.0e-10, Sum P(4) = 3.0e-10
Identities = 36/123 (29%), Positives = 62/123 (50%)
Query: 300 NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ-IEGVA 358
N+ K IACG + +T +G + T G +YGQ G TD +L P V L + +E ++
Sbjct: 506 NFHK-IACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQTDGKL-PCLVEDKLASEFVEEIS 563
Query: 359 AGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
G +H ++S +VY + +P +++A L++ H K ++CG+ +T
Sbjct: 564 CGAYHVAALTSRNEVYTWGKGANGRLGHGDLEDRKVPTIVEA--LKDRHVKYIACGSNYT 621
Query: 419 AVI 421
A I
Sbjct: 622 AAI 624
Score = 102 (41.0 bits), Expect = 2.5e-06, Sum P(4) = 2.5e-06
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 296 RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
++ +V+ I+CG H A +T + T+G G G+ G G +D P V +L ++
Sbjct: 553 KLASEFVEEISCGAYHVAALTSRNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDRHVK 612
Query: 356 GVAAGLWHT--ICI 367
+A G +T IC+
Sbjct: 613 YIACGSNYTAAICL 626
Score = 88 (36.0 bits), Expect = 5.4e-15, Sum P(4) = 5.4e-15
Identities = 24/75 (32%), Positives = 35/75 (46%)
Query: 74 DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRV 133
D SY+T+ +P+P + + A G H VT GE++TWG + GR+
Sbjct: 257 DKNASYLTTRTDVLVPKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEES---GGRL 313
Query: 134 FGDLSTGTGLDKDVF 148
G G+ KDVF
Sbjct: 314 ------GHGIGKDVF 322
Score = 82 (33.9 bits), Expect = 2.1e-14, Sum P(3) = 2.1e-14
Identities = 28/80 (35%), Positives = 35/80 (43%)
Query: 48 DVCGGGCGFAMAISDSRK--LITWG--STDDLGQSYVTSGKHGEIPEPFPLPTEASIVKA 103
DV CG A +R+ + TWG S LG H + E L +S+
Sbjct: 282 DVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRLVES--LTATSSVDFV 339
Query: 104 AAGWAHCVAVTEGGEVYTWG 123
A G H AVT GE+YTWG
Sbjct: 340 ACGEFHTCAVTLAGELYTWG 359
Score = 52 (23.4 bits), Expect = 2.4e-11, Sum P(3) = 2.4e-11
Identities = 28/115 (24%), Positives = 45/115 (39%)
Query: 14 VFMWGYLPGALPQRS---PILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWG 70
+F WG G + P +V LT S+ D G A++ + +L TWG
Sbjct: 302 IFTWGEESGGRLGHGIGKDVFHPRLVE-SLTATSSV-DFVACGEFHTCAVTLAGELYTWG 359
Query: 71 S-TDDLGQSYVTSGKHGEIPEPFPLPTEA-SIVKAAAGWAHCVAVTEGGEVYTWG 123
T ++G S IP+ E + + G H +T G ++T+G
Sbjct: 360 DGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGPWHTALITSYGRLFTFG 414
Score = 46 (21.3 bits), Expect = 5.4e-15, Sum P(4) = 5.4e-15
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDI 239
GD+ +P V G+R V+ G HT A+ +I
Sbjct: 424 GDKETVQYPREVESLSGLRTIAVSCGVWHTAAVVEI 459
Score = 38 (18.4 bits), Expect = 6.5e-16, Sum P(2) = 6.5e-16
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 99 SIVKAAAGWAHCVAVTEG---GEVYTWGWKEC 127
S+ A + +H A + G+VY WG C
Sbjct: 217 SVSSAQSSSSHGSAADDSDALGDVYIWGEVIC 248
Score = 38 (18.4 bits), Expect = 5.4e-15, Sum P(4) = 5.4e-15
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 52 GGCGFAMAISDSRKLITWGST-DD---LGQSYV 80
G GF +++S ++ + GS DD LG Y+
Sbjct: 210 GSDGFRVSVSSAQSSSSHGSAADDSDALGDVYI 242
>UNIPROTKB|F1NUG6 [details] [associations]
symbol:Gga.50841 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005929
"cilium" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
GO:GO:0005929 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104160 EMBL:AADN02011054 IPI:IPI00586770
Ensembl:ENSGALT00000026211 OMA:ENGLMFT Uniprot:F1NUG6
Length = 720
Score = 228 (85.3 bits), Expect = 6.5e-16, P = 6.5e-16
Identities = 52/169 (30%), Positives = 84/169 (49%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
I+CG H+AV+T G L FG +GQ G GS + P CV +L + + G HT
Sbjct: 42 ISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVRKPTCVKALKPEKTKLAVCGRNHT 101
Query: 365 ICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHS-KSVSCGARHTAVIAD 423
+ + G+VYA + T L+ N H K ++ G+ +A + +
Sbjct: 102 LVYTEKGNVYAAGGNSEGQLGLGDTEERTTFHLISF--FTNQHKIKQLAAGSYTSAAVTE 159
Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
DG++F WG N GQ+GL D ++P QV + G +++CG++H+ +
Sbjct: 160 DGQLFVWGDNSEGQIGLADKTCVSVPCQVDV-GKPVSSISCGYYHSAFI 207
Score = 171 (65.3 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 62/189 (32%), Positives = 89/189 (47%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS-LLGI--QIE 355
G V I+CG HSA IT G L TFG G+ G ++L + V +LGI ++
Sbjct: 191 GKPVSSISCGYYHSAFITGDGELYTFGEPENGKLGL--LPEQLKNSRVPQPVLGIMEKVN 248
Query: 356 GVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAET-LPRLLDAPSLENVHSKSVSCG 414
VA G HT+ ++ G VY +T +P+ + +H+ V+CG
Sbjct: 249 KVACGGEHTVVLTETG-VYTFGLGQYGQLGHGTLLFKTSVPKSVKHLRSHKIHN--VTCG 305
Query: 415 ARHTAVIAD--DGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC------VPRNVACGW 466
HTAVIAD +G +F +G ++G+LGLG+ N +Q C VACG
Sbjct: 306 ESHTAVIADTENGLMFTFGDGRHGKLGLGE---ENFANQFDPALCSNFLSFTVLLVACGG 362
Query: 467 WHTLLLAVP 475
H L+ A P
Sbjct: 363 CHMLVFATP 371
Score = 154 (59.3 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 45/171 (26%), Positives = 81/171 (47%)
Query: 307 CGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGI-QIEGVAAGLWHTI 365
CG H+ V T+ G + G GQ G G T++ + + +S +I+ +AAG + +
Sbjct: 96 CGRNHTLVYTEKGNVYAAGGNSEGQLGLGDTEERTTFHLISFFTNQHKIKQLAAGSYTSA 155
Query: 366 CISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDG 425
++ DG ++ ++P +D + S+SCG H+A I DG
Sbjct: 156 AVTEDGQLFVWGDNSEGQIGLADKTCVSVPCQVDVGKPVS----SISCGYYHSAFITGDG 211
Query: 426 KVFCWGWNKYGQLGL--GDVIDRNIPSQVTIEGCVPR--NVACGWWHTLLL 472
+++ +G + G+LGL + + +P V G + + VACG HT++L
Sbjct: 212 ELYTFGEPENGKLGLLPEQLKNSRVPQPVL--GIMEKVNKVACGGEHTVVL 260
Score = 54 (24.1 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 100 IVKAAAGWAHCVAVTEGGEVYTWG 123
I + AAG AVTE G+++ WG
Sbjct: 144 IKQLAAGSYTSAAVTEDGQLFVWG 167
Score = 50 (22.7 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 29/109 (26%), Positives = 43/109 (39%)
Query: 54 CG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPF---PLPTEASIVKAAAGWA 108
CG ++ + KL +GS +D GQ + G + +P L E + + A G
Sbjct: 44 CGDEHTAVVTGNGKLYMFGS-NDWGQ--LGLGSKNTVRKPTCVKALKPEKTKL-AVCGRN 99
Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTE 157
H + TE G VY G G G L G ++ F S F +
Sbjct: 100 HTLVYTEKGNVYAAG-------GNSEGQLGLGDTEERTTFHLISFFTNQ 141
>UNIPROTKB|F1PB99 [details] [associations]
symbol:HERC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:KDWITNT EMBL:AAEX03016753
EMBL:AAEX03016752 Ensembl:ENSCAFT00000015560 Uniprot:F1PB99
Length = 1025
Score = 229 (85.7 bits), Expect = 8.8e-16, P = 8.8e-16
Identities = 57/171 (33%), Positives = 84/171 (49%)
Query: 305 IACGGRHSAVIT--DAGALLTFGWGLYGQCGQGSTDDEL-SPNCVSSLLGIQIEGVAAGL 361
I CG HS ++ G L +G L+GQ G G + +P V L G+ + ++AG
Sbjct: 140 ITCGDYHSLALSKGQGGELFAWGQNLHGQLGVGRLFTSIPTPQLVEHLSGVPLVQISAGK 199
Query: 362 WHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
H++ +S G++Y+ E P L++A L+N + ++CG HTA++
Sbjct: 200 AHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEA--LDNQKVEFLACGGSHTALL 257
Query: 422 ADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGW-WHTL 470
DG VF +G KYGQLG + P VT + G VACG WHTL
Sbjct: 258 TKDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQVACGSRWHTL 308
Score = 194 (73.4 bits), Expect = 6.9e-15, Sum P(2) = 6.9e-15
Identities = 58/195 (29%), Positives = 87/195 (44%)
Query: 274 SYGKDRSAALSRGSVNSEG-PGF--RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
S+G++ L G N E P + V+ +ACGG H+A++T G + TFG G YG
Sbjct: 213 SWGRNDLGQLGLGHTNGEDFPSLIEALDNQKVEFLACGGSHTALLTKDGLVFTFGAGKYG 272
Query: 331 QCGQGSTDDELSPNCVSSLLGIQIEGVAAGL-WHTICISSD-GDVYAXXXXXXXXXXXXX 388
Q G ST +EL P V+ L G ++ VA G WHT+ SD G V++
Sbjct: 273 QLGHNSTQNELRPRLVTELAGNRVTQVACGSRWHTLAYVSDLGKVFSFGSGKEGQLGNGG 332
Query: 389 DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNI 448
+ +P + PS E + +S + + + + W K + L R I
Sbjct: 333 THNQLIPLPMKLPSNEELKFESRTSEKELIMIAGGNQSILLWMGKKNPYVNLR----RRI 388
Query: 449 PSQVTIEGCVPRNVA 463
P+ EG V R +A
Sbjct: 389 PT--LNEGTVKRWIA 401
Score = 177 (67.4 bits), Expect = 6.1e-12, Sum P(3) = 6.1e-12
Identities = 49/147 (33%), Positives = 74/147 (50%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
I+ G HS ++ +G + ++G GQ G G T+ E P+ + +L ++E +A G HT
Sbjct: 195 ISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQKVEFLACGGSHT 254
Query: 365 ICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGAR-HT-AVIA 422
++ DG V+ Q E PRL+ L V+CG+R HT A ++
Sbjct: 255 ALLTKDGLVFTFGAGKYGQLGHNSTQNELRPRLVT--ELAGNRVTQVACGSRWHTLAYVS 312
Query: 423 DDGKVFCWGWNKYGQLGLGDVIDRNIP 449
D GKVF +G K GQLG G ++ IP
Sbjct: 313 DLGKVFSFGSGKEGQLGNGGTHNQLIP 339
Score = 112 (44.5 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 26/79 (32%), Positives = 40/79 (50%)
Query: 395 PRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-T 453
P+L++ L V +S G H+ ++ G ++ WG N GQLGLG + PS +
Sbjct: 181 PQLVE--HLSGVPLVQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEA 238
Query: 454 IEGCVPRNVACGWWHTLLL 472
++ +ACG HT LL
Sbjct: 239 LDNQKVEFLACGGSHTALL 257
Score = 75 (31.5 bits), Expect = 6.9e-15, Sum P(2) = 6.9e-15
Identities = 23/77 (29%), Positives = 37/77 (48%)
Query: 50 CGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGK-HGEIPEPFPLP--TEASIVKAAAG 106
CG A++ +L WG GQ V G+ IP P + + +V+ +AG
Sbjct: 142 CGDYHSLALSKGQGGELFAWGQNLH-GQLGV--GRLFTSIPTPQLVEHLSGVPLVQISAG 198
Query: 107 WAHCVAVTEGGEVYTWG 123
AH +A++ G +Y+WG
Sbjct: 199 KAHSMALSMSGNIYSWG 215
Score = 59 (25.8 bits), Expect = 7.0e-14, Sum P(3) = 7.0e-14
Identities = 15/47 (31%), Positives = 26/47 (55%)
Query: 97 EASIVKAAAGWAHCVAVT--EGGEVYTWGWK--ECVPSGRVFGDLST 139
E SI++ G H +A++ +GGE++ WG + GR+F + T
Sbjct: 134 EKSIIQITCGDYHSLALSKGQGGELFAWGQNLHGQLGVGRLFTSIPT 180
Score = 47 (21.6 bits), Expect = 7.0e-14, Sum P(3) = 7.0e-14
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 212 PCLVTLNPGVRIATVAAGGRHTLALS 237
P LV GV + ++AG H++ALS
Sbjct: 181 PQLVEHLSGVPLVQISAGKAHSMALS 206
>UNIPROTKB|F1NCH3 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
OMA:KLVIQPT EMBL:AADN02028016 IPI:IPI00586918
Ensembl:ENSGALT00000006135 ArrayExpress:F1NCH3 Uniprot:F1NCH3
Length = 1048
Score = 198 (74.8 bits), Expect = 5.3e-12, Sum P(2) = 5.3e-12
Identities = 48/174 (27%), Positives = 85/174 (48%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVAAG 360
+ ++CG H+ + D G + +G GQ G T++ + P + SL IQI VA G
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACG 145
Query: 361 LWHTICISSDGDVYAXXXXXXXXXXXXXD-QAETLPRLLDAPSLENVHSKSVSCGARHTA 419
+H++ +S +V++ + + + P ++ SL + ++ G H+
Sbjct: 146 YYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIK--SLLGIPFAQIAAGGAHSF 203
Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLL 472
V+ G +F WG NK+GQLGL D DR +P+ + ++ ++ CG HT L
Sbjct: 204 VLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAAL 257
Score = 195 (73.7 bits), Expect = 5.6e-12, P = 5.6e-12
Identities = 51/176 (28%), Positives = 81/176 (46%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
++ + CG RH+ + D G + T G GQ G P V +L I V+ G
Sbjct: 36 IRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKARKR--PEHVGALDAQNIVAVSCGE 93
Query: 362 WHTICISSDGDVYAXXXXXXXXXXX-XXDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
HT+ ++ G VYA ++ +PR + SL + V+CG H+
Sbjct: 94 AHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPR--NIKSLSEIQIVQVACGYYHSLA 151
Query: 421 IADDGKVFCWGWNKYGQLGLG-DVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLAV 474
++ +VF WG NKYGQLGLG + +N P + ++ G +A G H+ +L +
Sbjct: 152 LSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTL 207
Score = 184 (69.8 bits), Expect = 9.2e-11, P = 9.2e-11
Identities = 54/160 (33%), Positives = 76/160 (47%)
Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXX 378
+L +G +GQ G G D+E L P L +I V GL HT+ + DG VY
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 379 XXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
++A P + A +N+ +VSCG HT + D G+V+ WG GQL
Sbjct: 61 NDLGQLGH--EKARKRPEHVGALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLATDGQL 116
Query: 439 GLGDV-----IDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
GL + RNI S I+ V VACG++H+L L+
Sbjct: 117 GLPGTEECIRVPRNIKSLSEIQ-IV--QVACGYYHSLALS 153
Score = 174 (66.3 bits), Expect = 9.7e-16, Sum P(3) = 9.7e-16
Identities = 48/164 (29%), Positives = 75/164 (45%)
Query: 305 IACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
IA GG HS V+T +GA+ FGWG +GQ G +D P + SL ++ + G
Sbjct: 195 IAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGED 252
Query: 363 HTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVI 421
HT ++ +G V+ E PR + L ++CG +HT A +
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF--ELMGSLVTQITCGRQHTTAFV 310
Query: 422 ADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEG-CVPRNVAC 464
G+++ +G GQLG G +R P T++G +P + C
Sbjct: 311 PSSGRIYSFGLGGNGQLGTGTTSNRKSP--FTVKGNWLPYSTQC 352
Score = 101 (40.6 bits), Expect = 9.7e-16, Sum P(3) = 9.7e-16
Identities = 23/80 (28%), Positives = 43/80 (53%)
Query: 47 RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHG-EIPEPFPLPTEASIVKA 103
+++ CG A +A++D ++ WG D GQ + + +P +E IV+
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLATD-GQLGLPGTEECIRVPRNIKSLSEIQIVQV 142
Query: 104 AAGWAHCVAVTEGGEVYTWG 123
A G+ H +A+++G EV++WG
Sbjct: 143 ACGYYHSLALSKGSEVFSWG 162
Score = 91 (37.1 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 24/74 (32%), Positives = 37/74 (50%)
Query: 274 SYGKDRSAALSRGSVNSE-GPG--FRVPGNYVKGIACGGRHS-AVITDAGALLTFGWGLY 329
++G L S + E P F + G+ V I CG +H+ A + +G + +FG G
Sbjct: 265 TFGAGGYGQLGHNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGN 324
Query: 330 GQCGQGSTDDELSP 343
GQ G G+T + SP
Sbjct: 325 GQLGTGTTSNRKSP 338
Score = 75 (31.5 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 23/93 (24%), Positives = 38/93 (40%)
Query: 36 VRLPLTVGSAWR-DVCGGGCGF--AMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPE 90
+R+P + S + CG+ ++A+S ++ +WG LG Y K P
Sbjct: 125 IRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGY--EYKKQNSPH 182
Query: 91 PFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
+ AAG AH +T G ++ WG
Sbjct: 183 VIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWG 215
Score = 47 (21.6 bits), Expect = 6.0e-10, Sum P(3) = 6.0e-10
Identities = 20/71 (28%), Positives = 29/71 (40%)
Query: 223 IATVAAGGRHTLALSD---IXXXXXXXXXXXXXXXXXSRIRM---VSSPHPIPCIESSYG 276
I V+ G HTLAL+D + IR+ + S I ++ + G
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACG 145
Query: 277 KDRSAALSRGS 287
S ALS+GS
Sbjct: 146 YYHSLALSKGS 156
Score = 46 (21.3 bits), Expect = 9.7e-16, Sum P(3) = 9.7e-16
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 220 GVRIATVAAGGRHTLALS 237
G+ A +AAGG H+ L+
Sbjct: 189 GIPFAQIAAGGAHSFVLT 206
Score = 43 (20.2 bits), Expect = 5.3e-12, Sum P(2) = 5.3e-12
Identities = 18/61 (29%), Positives = 23/61 (37%)
Query: 66 LITWGSTDDLGQSYVTSGKHGEI---PEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTW 122
++ WG+ GQ + G EI P I G H V V + G VYT
Sbjct: 1 MLCWGNAS-FGQLGL-GGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTC 58
Query: 123 G 123
G
Sbjct: 59 G 59
Score = 41 (19.5 bits), Expect = 2.4e-09, Sum P(3) = 2.4e-09
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 221 VRIATVAAGGRHTLALS 237
++I VA G H+LALS
Sbjct: 137 IQIVQVACGYYHSLALS 153
>UNIPROTKB|E2R5W9 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 OMA:ERPGAWF GeneTree:ENSGT00700000104312
EMBL:AAEX03002330 EMBL:AAEX03002329 Ensembl:ENSCAFT00000035362
Uniprot:E2R5W9
Length = 313
Score = 195 (73.7 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 63/207 (30%), Positives = 92/207 (44%)
Query: 274 SYGKDRSAALSRGSVNSEG-PGF--RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
S+G+ R L GS+ +E P + G V +A GG HS +++ G + +GW G
Sbjct: 118 SWGQGRHGQLGHGSLEAEPEPRLLEALQGLPVAEVAAGGWHSVCVSETGDIYIWGWNESG 177
Query: 331 QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQ 390
Q S L+ + + I A+GL + DG
Sbjct: 178 QLALPSRS--LAEDTKT------IPREASGL------NEDGFEVRRTAKGEDGAPAPFIA 223
Query: 391 AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
+ P LLD P +V SCG+RHTAV+ G+++ WGW KYGQLG D + P
Sbjct: 224 IQPFPALLDLPLGADV--VKASCGSRHTAVVTGTGELYTWGWGKYGQLGHKDTTSLDRPC 281
Query: 451 QVTI---EGCVPRNVACGWWHTLLLAV 474
+V + R V+CG W+T + AV
Sbjct: 282 RVEYFVDKQLQVRAVSCGPWNTYVYAV 308
Score = 164 (62.8 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 32/114 (28%), Positives = 58/114 (50%)
Query: 261 MVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA 320
+V+ P P + + A + ++ P P + + G H+ ++ +AG
Sbjct: 56 LVTRERPPPALLRPGPRVPGAKAPQPALRPPAPRALAPELRARRLELGAEHALLLDEAGQ 115
Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVY 374
+ ++G G +GQ G GS + E P + +L G+ + VAAG WH++C+S GD+Y
Sbjct: 116 VFSWGQGRHGQLGHGSLEAEPEPRLLEALQGLPVAEVAAGGWHSVCVSETGDIY 169
Score = 138 (53.6 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 47/167 (28%), Positives = 69/167 (41%)
Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIXXXXXXXXXXXXXXXXXSRIRMVSSPHPIPCI 271
P L+ G+ +A VAAGG H++ +S+ SR + IP
Sbjct: 138 PRLLEALQGLPVAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPSR-SLAEDTKTIPRE 196
Query: 272 ESSYGKD--RSAALSRGSVNSEGPGFRV-P---------GNYVKGIACGGRHSAVITDAG 319
S +D ++G + P + P G V +CG RH+AV+T G
Sbjct: 197 ASGLNEDGFEVRRTAKGEDGAPAPFIAIQPFPALLDLPLGADVVKASCGSRHTAVVTGTG 256
Query: 320 ALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG--IQIEGVAAGLWHT 364
L T+GWG YGQ G T P V + +Q+ V+ G W+T
Sbjct: 257 ELYTWGWGKYGQLGHKDTTSLDRPCRVEYFVDKQLQVRAVSCGPWNT 303
Score = 120 (47.3 bits), Expect = 0.00016, P = 0.00016
Identities = 42/161 (26%), Positives = 70/161 (43%)
Query: 319 GALLTFGWGLYGQC-GQGSTDDELSPNCVSSL-LGIQIEGVAAGLWHTICISSDGDVYAX 376
G+ FG+ +GQ G G LSP + + G + V+A +T ++ + A
Sbjct: 7 GSWFGFGFCGFGQAPGSGRGRQVLSPEPLQTPGSGADVRRVSASWSYTALVTRERPPPAL 66
Query: 377 XXXXXXXXXXXXDQAET---LPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWN 433
Q PR L AP L ++ + GA H ++ + G+VF WG
Sbjct: 67 LRPGPRVPGAKAPQPALRPPAPRAL-APELR---ARRLELGAEHALLLDEAGQVFSWGQG 122
Query: 434 KYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLA 473
++GQLG G + P + ++G VA G WH++ ++
Sbjct: 123 RHGQLGHGSLEAEPEPRLLEALQGLPVAEVAAGGWHSVCVS 163
Score = 112 (44.5 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 36/110 (32%), Positives = 54/110 (49%)
Query: 53 GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIP-EPFPLPTEA----SIVKAAAGW 107
G A+ + ++ ++ +WG GQ G HG + EP P EA + + AAG
Sbjct: 103 GAEHALLLDEAGQVFSWGQGRH-GQL----G-HGSLEAEPEPRLLEALQGLPVAEVAAGG 156
Query: 108 AHCVAVTEGGEVYTWGWKE----CVPSGRVFGDLST----GTGLDKDVFE 149
H V V+E G++Y WGW E +PS + D T +GL++D FE
Sbjct: 157 WHSVCVSETGDIYIWGWNESGQLALPSRSLAEDTKTIPREASGLNEDGFE 206
Score = 57 (25.1 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 89 PEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
P P L E + G H + + E G+V++WG
Sbjct: 86 PAPRALAPELRARRLELGAEHALLLDEAGQVFSWG 120
Score = 49 (22.3 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 208 LSAFPCLVTLNPGVRIATVAAGGRHTLALS 237
+ FP L+ L G + + G RHT ++
Sbjct: 224 IQPFPALLDLPLGADVVKASCGSRHTAVVT 253
>UNIPROTKB|E1B8U7 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
OMA:ERPGAWF GeneTree:ENSGT00700000104312 EMBL:DAAA02052163
IPI:IPI00710464 UniGene:Bt.111664 Ensembl:ENSBTAT00000024803
NextBio:20875558 Uniprot:E1B8U7
Length = 377
Score = 198 (74.8 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 63/208 (30%), Positives = 94/208 (45%)
Query: 274 SYGKDRSAALSRGSVNSEG-PGF--RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
S+G R L G++ +E P + G + +A GG HS +++ G + +GW G
Sbjct: 182 SWGAGRHGQLGHGTLEAEPEPRLLEALQGLRMAEVAAGGWHSVCLSETGDIYIWGWNESG 241
Query: 331 QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQ 390
Q + L+ + G G A+GL DG
Sbjct: 242 QLALPTKS--LAED------GKTTAGEASGL------EEDGSEVKRGSAGEDGAPAPFIA 287
Query: 391 AETLPRLLD-APSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDV--IDRN 447
+ P LLD +P E V VSCG+RHTAV+ G+++ WGW KYGQLG D +DR
Sbjct: 288 VQPFPALLDLSPGSEAV---KVSCGSRHTAVLTRTGELYTWGWGKYGQLGHKDTTTLDRP 344
Query: 448 IPSQVTIEGCVP-RNVACGWWHTLLLAV 474
+ ++ + R V+CG W+T + AV
Sbjct: 345 CRVEYFVDKQLQVRTVSCGPWNTYVYAV 372
Score = 156 (60.0 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 30/93 (32%), Positives = 53/93 (56%)
Query: 284 SRGSVNSEGPGFR--VPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL 341
+R V+ P +R P + + G H+ ++ AG + ++G G +GQ G G+ + E
Sbjct: 141 ARAYVSPRPPFYRPLAPTLRARRLELGAEHALLLDAAGQVFSWGAGRHGQLGHGTLEAEP 200
Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVY 374
P + +L G+++ VAAG WH++C+S GD+Y
Sbjct: 201 EPRLLEALQGLRMAEVAAGGWHSVCLSETGDIY 233
Score = 119 (46.9 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 24/81 (29%), Positives = 41/81 (50%)
Query: 360 GLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
G H + + + G V++ +AE PRLL+A L+ + V+ G H+
Sbjct: 167 GAEHALLLDAAGQVFSWGAGRHGQLGHGTLEAEPEPRLLEA--LQGLRMAEVAAGGWHSV 224
Query: 420 VIADDGKVFCWGWNKYGQLGL 440
+++ G ++ WGWN+ GQL L
Sbjct: 225 CLSETGDIYIWGWNESGQLAL 245
Score = 104 (41.7 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVP 459
P + ++ + GA H ++ G+VF WG ++GQLG G + P + ++G
Sbjct: 154 PLAPTLRARRLELGAEHALLLDAAGQVFSWGAGRHGQLGHGTLEAEPEPRLLEALQGLRM 213
Query: 460 RNVACGWWHTLLLA 473
VA G WH++ L+
Sbjct: 214 AEVAAGGWHSVCLS 227
Score = 60 (26.2 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 83 GKHGEIPEPFPLPTEA-SIVKAAAGWAHCVAVTEGGEVYTWG 123
G+ PEP P + + + +A W++ VT GG V G
Sbjct: 26 GRQVHSPEPLRTPGGSLGVCRVSASWSYTAFVTRGGRVQLSG 67
Score = 47 (21.6 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 16/53 (30%), Positives = 23/53 (43%)
Query: 91 PF--PLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGT 141
PF PL + G H + + G+V++WG +GR G L GT
Sbjct: 150 PFYRPLAPTLRARRLELGAEHALLLDAAGQVFSWG------AGR-HGQLGHGT 195
>UNIPROTKB|E1BVG2 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104208 OMA:NCSNCLG EMBL:AADN02005390
IPI:IPI00590638 Ensembl:ENSGALT00000027473 Uniprot:E1BVG2
Length = 531
Score = 221 (82.9 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 63/217 (29%), Positives = 102/217 (47%)
Query: 263 SSPHPIPCIES----SYGKDRSAALSRGSVNSEGPGFRVPGNY----VKGIACGGRHSAV 314
S PH + C E ++G + + L G+ N +V N V +ACG HS
Sbjct: 83 SGPHVLLCTEDGEVYAWGHNGYSQLGNGATNQGVTPVQVCTNLLLKKVIEVACGSHHSMA 142
Query: 315 ITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ-IEGVAAGLWHTICISSDGDV 373
++ G L +G+ GQ G GST ++ +P VS+ L + + G+A G ++ + ++G+V
Sbjct: 143 LSFDGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQDKMVVGIACGQTSSMAVVNNGEV 202
Query: 374 YAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWN 433
Y + + P + A L V ++CG HT + D+G ++ WG N
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTPCRVAA--LHGVCILQIACGYAHTLALTDEGLLYAWGAN 260
Query: 434 KYGQLGLGDVIDRNIPSQVTIEG-CVPRNVACGWWHT 469
YGQLG G+ ++ P Q+ +E V AC HT
Sbjct: 261 TYGQLGTGNKSNQLSPLQIMMEKERVVEIAACHSAHT 297
Score = 213 (80.0 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 54/178 (30%), Positives = 91/178 (51%)
Query: 299 GNYVKGIACG-GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN--CVSSLLGIQIE 355
G + ++ G G H + T+ G + +G Y Q G G+T+ ++P C + LL IE
Sbjct: 73 GKKISSLSYGSGPHVLLCTEDGEVYAWGHNGYSQLGNGATNQGVTPVQVCTNLLLKKVIE 132
Query: 356 GVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGA 415
VA G H++ +S DGD+YA + PR + + L++ ++CG
Sbjct: 133 -VACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQPTPRRV-SNCLQDKMVVGIACGQ 190
Query: 416 RHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
+ + ++G+V+ WG+N GQLGLG+ ++ P +V + G +ACG+ HTL L
Sbjct: 191 TSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQLTPCRVAALHGVCILQIACGYAHTLAL 248
Score = 142 (55.0 bits), Expect = 9.1e-10, Sum P(2) = 9.1e-10
Identities = 45/165 (27%), Positives = 76/165 (46%)
Query: 274 SYGKDRSAALSRGSVNSEGPGFRVPG----NYVKGIACGGRHSAVITDAGALLTFGWGLY 329
++G + + GS ++ RV V GIACG S + + G + +GWG
Sbjct: 151 AWGYNNCGQVGSGSTANQPTPRRVSNCLQDKMVVGIACGQTSSMAVVNNGEV--YGWGYN 208
Query: 330 G--QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXX 387
G Q G G+ ++L+P V++L G+ I +A G HT+ ++ +G +YA
Sbjct: 209 GNGQLGLGNNGNQLTPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQLGTG 268
Query: 388 XDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
+++ L L E V + +C + HT A G+V+ WG
Sbjct: 269 -NKSNQLSPLQIMMEKERV-VEIAACHSAHTSAAKTQSGQVYMWG 311
Score = 142 (55.0 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 37/149 (24%), Positives = 69/149 (46%)
Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW-HTICISSDGDVYA-XXX 378
+ FG G G + + P + +L G +I ++ G H + + DG+VYA
Sbjct: 43 VFVFGLNCSNCLGTGDSQSTIVPKKLEALCGKKISSLSYGSGPHVLLCTEDGEVYAWGHN 102
Query: 379 XXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
+Q T ++ L+ V V+CG+ H+ ++ DG ++ WG+N GQ+
Sbjct: 103 GYSQLGNGATNQGVTPVQVCTNLLLKKVIE--VACGSHHSMALSFDGDLYAWGYNNCGQV 160
Query: 439 GLGDVIDRNIPSQVT--IEGCVPRNVACG 465
G G ++ P +V+ ++ + +ACG
Sbjct: 161 GSGSTANQPTPRRVSNCLQDKMVVGIACG 189
Score = 74 (31.1 bits), Expect = 9.1e-10, Sum P(2) = 9.1e-10
Identities = 22/86 (25%), Positives = 38/86 (44%)
Query: 51 GGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEA---SIVKAAAGW 107
G G + D ++ WG G S + +G + P + T +++ A G
Sbjct: 82 GSGPHVLLCTEDG-EVYAWGHN---GYSQLGNGATNQGVTPVQVCTNLLLKKVIEVACGS 137
Query: 108 AHCVAVTEGGEVYTWGWKEC--VPSG 131
H +A++ G++Y WG+ C V SG
Sbjct: 138 HHSMALSFDGDLYAWGYNNCGQVGSG 163
Score = 43 (20.2 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 203 SGDENLSAFPCLVTLNPGVR-IATVAAGGRHTLALS 237
+G N P V N ++ + VA G H++ALS
Sbjct: 109 NGATNQGVTPVQVCTNLLLKKVIEVACGSHHSMALS 144
>TAIR|locus:2079147 [details] [associations]
symbol:AT3G47660 "AT3G47660" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0008536
"Ran GTPase binding" evidence=ISS] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000306 Pfam:PF01363 SMART:SM00064
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 IPI:IPI00548806 RefSeq:NP_190350.4 UniGene:At.48747
UniGene:At.66547 ProteinModelPortal:F4JCN3 SMR:F4JCN3 PRIDE:F4JCN3
EnsemblPlants:AT3G47660.1 GeneID:823920 KEGG:ath:AT3G47660
OMA:CLSHEIS ArrayExpress:F4JCN3 Uniprot:F4JCN3
Length = 954
Score = 225 (84.3 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 51/171 (29%), Positives = 83/171 (48%)
Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
+ I+CG ++ ++T G + ++G G+ G G P + G +E G +
Sbjct: 302 QSISCGTNYAVLVTKQGQMYSWGEESGGRLGHGVCSYVPHPKLIDEFNGSTVELADCGEF 361
Query: 363 HTICISSDGDVYAXXXXXXXXXXXXXDQAET--LP-RLLDAPSLENVHSKSVSCGARHTA 419
HT +++ GD+YA + P R+L +E ++ K++SCG HTA
Sbjct: 362 HTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRILG--QMEGIYVKAISCGPWHTA 419
Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
+ +GK+F +G +G LG GD I NIP +V + GC ACG WH+
Sbjct: 420 FVTSEGKLFTFGDGTFGALGHGDRISTNIPREVEALNGCRTIKAACGVWHS 470
Score = 188 (71.2 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 64/187 (34%), Positives = 87/187 (46%)
Query: 306 ACGGRHSAVI-------TDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
ACG HSA + T +G L T+G G G+ G G + L P+CV+ L + VA
Sbjct: 464 ACGVWHSAAVVSVFGEATSSGKLFTWGDGDDGRLGHGDIECRLIPSCVTELDTTSFQQVA 523
Query: 359 AGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPS-LENVHSKS----VSC 413
G T+ +S G VYA D + + R APS +E KS V+C
Sbjct: 524 CGQSITVALSMSGQVYAMGTA---------DPSHDIVR---APSCIEGGLGKSFVQEVAC 571
Query: 414 GARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG--WWHTL 470
G H AV+ +V+ WG GQLG GD R +P+ V ++G R V CG + T+
Sbjct: 572 GFHHIAVLNSKAEVYTWGKGSNGQLGHGDTEYRCMPTLVKALKGKQVRKVVCGSNYTATI 631
Query: 471 LLAVPPT 477
L P T
Sbjct: 632 CLHKPIT 638
Score = 186 (70.5 bits), Expect = 4.9e-11, P = 4.9e-11
Identities = 60/216 (27%), Positives = 100/216 (46%)
Query: 274 SYGKDRSAALSRGSVNSEGPGFRV----PGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
S+G++ L G V S P ++ G+ V+ CG H+ +T +G L +G G +
Sbjct: 322 SWGEESGGRLGHG-VCSYVPHPKLIDEFNGSTVELADCGEFHTCAVTASGDLYAWGDGDH 380
Query: 330 --GQCGQGSTDDELSP-NCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXX 386
G G GS P + + GI ++ ++ G WHT ++S+G ++
Sbjct: 381 NAGLLGLGSGASHWKPVRILGQMEGIYVKAISCGPWHTAFVTSEGKLFTFGDGTFGALGH 440
Query: 387 XXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD-------DGKVFCWGWNKYGQLG 439
+ +PR ++A L + +CG H+A + GK+F WG G+LG
Sbjct: 441 GDRISTNIPREVEA--LNGCRTIKAACGVWHSAAVVSVFGEATSSGKLFTWGDGDDGRLG 498
Query: 440 LGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLAV 474
GD+ R IPS VT ++ + VACG T+ L++
Sbjct: 499 HGDIECRLIPSCVTELDTTSFQQVACGQSITVALSM 534
Score = 157 (60.3 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 56/212 (26%), Positives = 87/212 (41%)
Query: 276 GKDRSAALSRGSVNSEGPGFRVPGN----YVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
G + L GS S R+ G YVK I+CG H+A +T G L TFG G +G
Sbjct: 378 GDHNAGLLGLGSGASHWKPVRILGQMEGIYVKAISCGPWHTAFVTSEGKLFTFGDGTFGA 437
Query: 332 CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI-------SSDGDVYAXXXXXXXXX 384
G G P V +L G + A G+WH+ + +S G ++
Sbjct: 438 LGHGDRISTNIPREVEALNGCRTIKAACGVWHSAAVVSVFGEATSSGKLFTWGDGDDGRL 497
Query: 385 XXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVI 444
+ +P + L+ + V+CG T ++ G+V+ G D++
Sbjct: 498 GHGDIECRLIPSCVT--ELDTTSFQQVACGQSITVALSMSGQVYAMGTADPSH----DIV 551
Query: 445 DRNIPSQVTIEGCVPRN----VACGWWHTLLL 472
PS IEG + ++ VACG+ H +L
Sbjct: 552 --RAPS--CIEGGLGKSFVQEVACGFHHIAVL 579
Score = 112 (44.5 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 25/70 (35%), Positives = 37/70 (52%)
Query: 300 NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAA 359
++V+ +ACG H AV+ + T+G G GQ G G T+ P V +L G Q+ V
Sbjct: 564 SFVQEVACGFHHIAVLNSKAEVYTWGKGSNGQLGHGDTEYRCMPTLVKALKGKQVRKVVC 623
Query: 360 GLWHT--ICI 367
G +T IC+
Sbjct: 624 GSNYTATICL 633
Score = 78 (32.5 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 33/122 (27%), Positives = 53/122 (43%)
Query: 14 VFMWGY-----LPGALPQRSPILSPLVVR--LPLTVGS-AWRDVCGGGCG--FAMAISDS 63
VF+WG L G +S S L+ LP + S D CG +A+ ++
Sbjct: 258 VFVWGESIGDGLLGGGMHKSGSSSSLMTDSFLPKVLKSHVALDAQSISCGTNYAVLVTKQ 317
Query: 64 RKLITWG--STDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYT 121
++ +WG S LG + H ++ + F +++ A G H AVT G++Y
Sbjct: 318 GQMYSWGEESGGRLGHGVCSYVPHPKLIDEF---NGSTVELADCGEFHTCAVTASGDLYA 374
Query: 122 WG 123
WG
Sbjct: 375 WG 376
Score = 63 (27.2 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 29/74 (39%), Positives = 37/74 (50%)
Query: 56 FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLP---TE---ASIVKAAAGWAH 109
F A S S KL TWG DD G+ G HG+I E +P TE S + A G +
Sbjct: 477 FGEATS-SGKLFTWGDGDD-GRL----G-HGDI-ECRLIPSCVTELDTTSFQQVACGQSI 528
Query: 110 CVAVTEGGEVYTWG 123
VA++ G+VY G
Sbjct: 529 TVALSMSGQVYAMG 542
Score = 57 (25.1 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 23/74 (31%), Positives = 32/74 (43%)
Query: 54 CG--FAMAISDSRKLITWGSTD-DLGQSYVTSGKHGEIPEPFPLPTEASIVKA-AAGWAH 109
CG A++ S L WG D + G + SG P E VKA + G H
Sbjct: 358 CGEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQMEGIYVKAISCGPWH 417
Query: 110 CVAVTEGGEVYTWG 123
VT G+++T+G
Sbjct: 418 TAFVTSEGKLFTFG 431
>MGI|MGI:1344037 [details] [associations]
symbol:Rpgr "retinitis pigmentosa GTPase regulator"
species:10090 "Mus musculus" [GO:0001750 "photoreceptor outer
segment" evidence=ISO] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005929
"cilium" evidence=IDA] [GO:0007601 "visual perception"
evidence=ISO;IMP] [GO:0030030 "cell projection organization"
evidence=IEA] [GO:0042384 "cilium assembly" evidence=ISO]
[GO:0042462 "eye photoreceptor cell development" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0050896 "response
to stimulus" evidence=IEA] MGI:MGI:1344037 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005794 GO:GO:0005737 GO:GO:0005813
GO:GO:0005929 GO:GO:0007601 GO:GO:0050896 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042073
eggNOG:COG5184 GO:GO:0036064 GO:GO:0042462
GeneTree:ENSGT00700000104160 GO:GO:0036126 CTD:6103
HOGENOM:HOG000231314 HOVERGEN:HBG026899 ChiTaRS:RPGR EMBL:AF044677
EMBL:AJ238396 EMBL:AJ318464 EMBL:AL671042 EMBL:AK017192
EMBL:BX005236 EMBL:HQ260316 IPI:IPI00122416 IPI:IPI00128188
IPI:IPI00230648 IPI:IPI00230650 RefSeq:NP_001171421.1
RefSeq:NP_035415.1 UniGene:Mm.247556 ProteinModelPortal:Q9R0X5
SMR:Q9R0X5 DIP:DIP-46319N STRING:Q9R0X5 PhosphoSite:Q9R0X5
PRIDE:Q9R0X5 Ensembl:ENSMUST00000044598 GeneID:19893 KEGG:mmu:19893
UCSC:uc009sqj.2 InParanoid:Q9R0X5 NextBio:297416 CleanEx:MM_RPGR
Genevestigator:Q9R0X5 GermOnline:ENSMUSG00000031174 Uniprot:Q9R0X5
Length = 1001
Score = 225 (84.3 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 51/171 (29%), Positives = 87/171 (50%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
++CG H+A++T L FG +GQ G GS + P C+ +L +++ A G HT
Sbjct: 40 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 99
Query: 365 ICISSDGDVYAXXXXXXXXXXXX-XDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
+ + G VYA D +T +++ + + K +S GA +A + +
Sbjct: 100 LVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTI--KQLSAGANTSAALTE 157
Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAV 474
DGK+F WG N GQ+GL D + IP +VT+ G ++CG++H+ + +
Sbjct: 158 DGKLFMWGDNSEGQIGLEDKSNVCIPHEVTV-GKPISWISCGYYHSAFVTM 207
Score = 151 (58.2 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 56/187 (29%), Positives = 93/187 (49%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS--LLGI--QI 354
G + I+CG HSA +T G L TFG G+ G +EL N S +LGI ++
Sbjct: 189 GKPISWISCGYYHSAFVTMDGELYTFGEPENGKLG---LPNELLMNHRSPQRVLGIPERV 245
Query: 355 EGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETL-PRLLDAPSLENV-HSKSVS 412
VA G HT+ ++ + VYA ET P++++ + + H +S
Sbjct: 246 IQVACGGGHTVVLT-EKVVYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICH---IS 301
Query: 413 CGARHTAVIADDGKVFCWGWNKYGQLGLG--DVIDRNIPSQVT--IEGCVPRNVACGWWH 468
CG HTA++ + G ++ +G ++G+LGLG + ++ P+ + + V + +ACG H
Sbjct: 302 CGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAV-QLIACGGCH 360
Query: 469 TLLLAVP 475
L+ A P
Sbjct: 361 MLVFATP 367
Score = 146 (56.5 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 48/174 (27%), Positives = 75/174 (43%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDD-ELSPNCVSSLLGIQIEGVAAG 360
VK ACG H+ V TD G + G GQ G G TDD + V I+ ++AG
Sbjct: 89 VKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAG 148
Query: 361 LWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
+ ++ DG ++ +P + +SCG H+A
Sbjct: 149 ANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGK----PISWISCGYYHSAF 204
Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPR--NVACGWWHTLLL 472
+ DG+++ +G + G+LGL + + N S + G R VACG HT++L
Sbjct: 205 VTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERVIQVACGGGHTVVL 258
Score = 102 (41.0 bits), Expect = 2.4e-05, Sum P(4) = 2.4e-05
Identities = 22/76 (28%), Positives = 41/76 (53%)
Query: 296 RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD--DELSPNCVSSLLGIQ 353
R+ + I+CG H+A++T+ G L TFG G +G+ G G + ++ P S+ L
Sbjct: 291 RIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFA 350
Query: 354 IEGVAAGLWHTICISS 369
++ +A G H + ++
Sbjct: 351 VQLIACGGCHMLVFAT 366
Score = 74 (31.1 bits), Expect = 2.4e-05, Sum P(4) = 2.4e-05
Identities = 21/74 (28%), Positives = 34/74 (45%)
Query: 53 GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
G + A+++ KL WG + GQ + + IP + S + + G+ H
Sbjct: 148 GANTSAALTEDGKLFMWGDNSE-GQIGLEDKSNVCIPHEVTVGKPISWI--SCGYYHSAF 204
Query: 113 VTEGGEVYTWGWKE 126
VT GE+YT+G E
Sbjct: 205 VTMDGELYTFGEPE 218
Score = 51 (23.0 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 24/108 (22%), Positives = 43/108 (39%)
Query: 17 WGYLPGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLG 76
WG L L ++ I+ P ++ L CG + +D+ + G ++ G
Sbjct: 64 WGQL--GLGSKAAIIKPTCIKA-LKPEKVKLAACGRN--HTLVSTDTGGVYAAGGNNE-G 117
Query: 77 QSYVTSGKHGEIPEPFPLPTEASIVKA-AAGWAHCVAVTEGGEVYTWG 123
Q + + T A +K +AG A+TE G+++ WG
Sbjct: 118 QLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTEDGKLFMWG 165
Score = 45 (20.9 bits), Expect = 2.4e-05, Sum P(4) = 2.4e-05
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 222 RIATVAAGGRHTLALSD 238
R+ VA GG HT+ L++
Sbjct: 244 RVIQVACGGGHTVVLTE 260
Score = 41 (19.5 bits), Expect = 2.4e-05, Sum P(4) = 2.4e-05
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 395 PRL--LDAPSLENVHSKSVSCGA 415
PRL +D P E+V+ +S G+
Sbjct: 367 PRLGTIDEPKFEDVYEPYISTGS 389
>UNIPROTKB|F1RMH6 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
OMA:ERPGAWF GeneTree:ENSGT00700000104312 EMBL:CT868688
Ensembl:ENSSSCT00000002041 Uniprot:F1RMH6
Length = 382
Score = 194 (73.4 bits), Expect = 2.5e-15, Sum P(2) = 2.5e-15
Identities = 63/207 (30%), Positives = 93/207 (44%)
Query: 274 SYGKDRSAALSRGSVNSEG-PGF--RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
S+G R L G++ +E P + G + +A GG HS +++ G + +GW G
Sbjct: 187 SWGGGRHGQLGHGTLEAEREPRVLEALQGLPMAEVAAGGWHSVCVSETGDIYIWGWNESG 246
Query: 331 QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQ 390
Q + L+ + G I G A GL + DG
Sbjct: 247 QLALPARS--LAED------GKTITGDAPGL------NEDGSEAKRATEGEDGGPTPFIA 292
Query: 391 AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
+ P LLD P L + K+ SCG+RHTAV+ G+++ WGW KYGQLG D + P
Sbjct: 293 VQPFPALLDLP-LGSDAVKA-SCGSRHTAVVTRTGELYTWGWGKYGQLGHKDTTSLDRPC 350
Query: 451 QVTI---EGCVPRNVACGWWHTLLLAV 474
+V + R V+CG W+T + AV
Sbjct: 351 RVEYFVDKQLQVRTVSCGPWNTYVFAV 377
Score = 155 (59.6 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 29/89 (32%), Positives = 51/89 (57%)
Query: 288 VNSEGPGFR--VPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNC 345
V+ + P +R P + + G H+ ++ AG + ++G G +GQ G G+ + E P
Sbjct: 150 VSPQPPFYRPLAPTLRARRLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAEREPRV 209
Query: 346 VSSLLGIQIEGVAAGLWHTICISSDGDVY 374
+ +L G+ + VAAG WH++C+S GD+Y
Sbjct: 210 LEALQGLPMAEVAAGGWHSVCVSETGDIY 238
Score = 114 (45.2 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 23/81 (28%), Positives = 41/81 (50%)
Query: 360 GLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
G H + + + G V++ +AE PR+L+A L+ + V+ G H+
Sbjct: 172 GAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAEREPRVLEA--LQGLPMAEVAAGGWHSV 229
Query: 420 VIADDGKVFCWGWNKYGQLGL 440
+++ G ++ WGWN+ GQL L
Sbjct: 230 CVSETGDIYIWGWNESGQLAL 250
Score = 105 (42.0 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 21/74 (28%), Positives = 38/74 (51%)
Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVP 459
P + ++ + GA H ++ G+VF WG ++GQLG G + P + ++G
Sbjct: 159 PLAPTLRARRLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAEREPRVLEALQGLPM 218
Query: 460 RNVACGWWHTLLLA 473
VA G WH++ ++
Sbjct: 219 AEVAAGGWHSVCVS 232
Score = 64 (27.6 bits), Expect = 2.5e-15, Sum P(2) = 2.5e-15
Identities = 14/47 (29%), Positives = 26/47 (55%)
Query: 76 GQSYVTSGKHGEI--PEPFPLP-TEASIVKAAAGWAHCVAVTEGGEV 119
GQ+ + SG+ ++ PEP +P + + +A W++ VT GG +
Sbjct: 18 GQA-LGSGRGRQVYSPEPLEVPGASLDVCRVSASWSYTATVTRGGRL 63
Score = 46 (21.3 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 16/53 (30%), Positives = 22/53 (41%)
Query: 91 PF--PLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGT 141
PF PL + G H + + G+V++WG GR G L GT
Sbjct: 155 PFYRPLAPTLRARRLELGAEHALLLDAAGQVFSWG------GGR-HGQLGHGT 200
>ZFIN|ZDB-GENE-040426-2216 [details] [associations]
symbol:rcc1 "regulator of chromosome condensation
1" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-040426-2216
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104160 KO:K11493 CTD:1104
HOGENOM:HOG000234341 HOVERGEN:HBG017712 OrthoDB:EOG4320Z9
HSSP:P18754 OMA:GTESCFV EMBL:CR855299 EMBL:BC059796 EMBL:BC066721
IPI:IPI00511389 RefSeq:NP_998343.1 UniGene:Dr.77012 SMR:Q6NY65
STRING:Q6NY65 Ensembl:ENSDART00000054026 GeneID:406457
KEGG:dre:406457 InParanoid:Q6NY65 NextBio:20818049 Uniprot:Q6NY65
Length = 418
Score = 165 (63.1 bits), Expect = 3.1e-15, Sum P(2) = 3.1e-15
Identities = 50/174 (28%), Positives = 79/174 (45%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE--GVAAGLW 362
+ CG + ++ G + FG Y Q G ST+ P +SS G + G
Sbjct: 242 VFCGAYFTFAVSKEGHVYGFGLSNYHQLGTQSTNTCFVPVKLSSFKNSTTSWVGFSGGQH 301
Query: 363 HTICISSDGDVYAXXXXXXXXXXXXXDQAE-TLPRLLDAPSLENVHSKSVSCGARHTAVI 421
HT+C++S+G Y+ D E + P ++ P + +V + V+CGA + +
Sbjct: 302 HTLCLNSEGKAYSLGRAEYGRLGLGKDVGEKSEPTVV--PGISDV--QVVACGASVSYAV 357
Query: 422 ADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT---IEGCVPRNVACGWWHTLLL 472
G VF WG QLG G+ D P ++T +E V +V+ G HT+LL
Sbjct: 358 TKQGSVFSWGMGTNLQLGTGEEEDEWSPVEMTGKQLENRVVLSVSSGGQHTVLL 411
Score = 105 (42.0 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 31/122 (25%), Positives = 50/122 (40%)
Query: 304 GIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVAAGLW 362
G + G H+ + G + G YG+ G G E S P V + +Q+ VA G
Sbjct: 295 GFSGGQHHTLCLNSEGKAYSLGRAEYGRLGLGKDVGEKSEPTVVPGISDVQV--VACGAS 352
Query: 363 HTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIA 422
+ ++ G V++ ++ E P + LEN SVS G +HT ++
Sbjct: 353 VSYAVTKQGSVFSWGMGTNLQLGTGEEEDEWSPVEMTGKQLENRVVLSVSSGGQHTVLLV 412
Query: 423 DD 424
D
Sbjct: 413 KD 414
Score = 98 (39.6 bits), Expect = 3.1e-15, Sum P(2) = 3.1e-15
Identities = 29/91 (31%), Positives = 44/91 (48%)
Query: 33 PLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPF 92
P +V LP + A V GG + +SD+ + T+G D+ TS + G P
Sbjct: 60 PALVTLPEGIVQA---VAGGM--HTVCLSDTGNVYTFGCNDEGALGRDTS-EEGSETVPA 113
Query: 93 PLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
+ I++ +AG +H A+TE G VY WG
Sbjct: 114 KVDLGEKIIQVSAGDSHSAALTEDGGVYVWG 144
Score = 97 (39.2 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 32/104 (30%), Positives = 49/104 (47%)
Query: 274 SYGKDRSAALSRGS-VNSEGPGFRVPG-NYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
S G+ L G V + VPG + V+ +ACG S +T G++ ++G G Q
Sbjct: 314 SLGRAEYGRLGLGKDVGEKSEPTVVPGISDVQVVACGASVSYAVTKQGSVFSWGMGTNLQ 373
Query: 332 CGQGSTDDELSPNCVSSLLGIQIEG-----VAAGLWHTICISSD 370
G G +DE SP + G Q+E V++G HT+ + D
Sbjct: 374 LGTGEEEDEWSP---VEMTGKQLENRVVLSVSSGGQHTVLLVKD 414
Score = 77 (32.2 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 23/81 (28%), Positives = 35/81 (43%)
Query: 53 GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
G + A+++ + WGS D + P +P + +VK +G H V
Sbjct: 127 GDSHSAALTEDGGVYVWGSFRDNNGVIGLLEPMKKCTVPVKVPIDKPVVKIVSGNDHLVM 186
Query: 113 VTEGGEVYTWGWKECVPSGRV 133
+T GE+YT G E GRV
Sbjct: 187 LTAHGELYTSGCGEQGQLGRV 207
Score = 65 (27.9 bits), Expect = 5.7e-13, Sum P(3) = 5.7e-13
Identities = 18/52 (34%), Positives = 26/52 (50%)
Query: 87 EIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLS 138
E +P + IV+A AG H V +++ G VYT+G C G + D S
Sbjct: 56 ERKKPALVTLPEGIVQAVAGGMHTVCLSDTGNVYTFG---CNDEGALGRDTS 104
Score = 62 (26.9 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 15/27 (55%), Positives = 16/27 (59%)
Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSD 238
P LVTL G I AGG HT+ LSD
Sbjct: 60 PALVTLPEG--IVQAVAGGMHTVCLSD 84
Score = 47 (21.6 bits), Expect = 5.7e-13, Sum P(3) = 5.7e-13
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 199 ESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSD 238
++S G E + P V L G +I V+AG H+ AL++
Sbjct: 102 DTSEEGSETV---PAKVDL--GEKIIQVSAGDSHSAALTE 136
>UNIPROTKB|Q92834 [details] [associations]
symbol:RPGR "X-linked retinitis pigmentosa GTPase
regulator" species:9606 "Homo sapiens" [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0050896 "response to stimulus" evidence=IEA] [GO:0035085
"cilium axoneme" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007601 "visual perception" evidence=IMP] [GO:0001750
"photoreceptor outer segment" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0042073 "intraflagellar transport" evidence=ISS]
[GO:0036064 "cilium basal body" evidence=ISS] [GO:0036126 "sperm
flagellum" evidence=ISS] [GO:0006886 "intracellular protein
transport" evidence=TAS] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005794 GO:GO:0005813 GO:GO:0006886 GO:GO:0007601
Orphanet:1872 Orphanet:791 GO:GO:0050896 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 GO:GO:0042384
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:CH471141 GO:GO:0042073 GO:GO:0001750 eggNOG:COG5184
Orphanet:244 GO:GO:0036064 Orphanet:49382 GO:GO:0036126
EMBL:AL606748 CTD:6103 HOVERGEN:HBG026899 EMBL:U57629 EMBL:X97668
EMBL:AJ238395 EMBL:AJ318463 EMBL:BC031624 EMBL:AF286471
EMBL:BK005711 IPI:IPI00023757 IPI:IPI00215806 IPI:IPI00215807
IPI:IPI00215808 IPI:IPI00382445 IPI:IPI00397031 RefSeq:NP_000319.1
RefSeq:NP_001030025.1 UniGene:Hs.61438 ProteinModelPortal:Q92834
SMR:Q92834 STRING:Q92834 PhosphoSite:Q92834 DMDM:23503098
PaxDb:Q92834 PRIDE:Q92834 DNASU:6103 Ensembl:ENST00000309513
Ensembl:ENST00000318842 Ensembl:ENST00000338898
Ensembl:ENST00000339363 Ensembl:ENST00000342811
Ensembl:ENST00000378505 Ensembl:ENST00000474584
Ensembl:ENST00000482855 GeneID:6103 KEGG:hsa:6103 UCSC:uc004deb.3
GeneCards:GC0XM038128 HGNC:HGNC:10295 HPA:HPA001593 MIM:300029
MIM:300455 MIM:300834 MIM:304020 MIM:312610 neXtProt:NX_Q92834
Orphanet:247522 PharmGKB:PA34656 OMA:NNVLPHY PhylomeDB:Q92834
ChiTaRS:RPGR GenomeRNAi:6103 NextBio:23741 ArrayExpress:Q92834
Bgee:Q92834 CleanEx:HS_RPGR Genevestigator:Q92834
GermOnline:ENSG00000156313 Uniprot:Q92834
Length = 1020
Score = 222 (83.2 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 52/165 (31%), Positives = 84/165 (50%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
++CG HSAV+T L FG +GQ G GS P CV +L +++ A G HT
Sbjct: 40 LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHT 99
Query: 365 ICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
+ + G+VYA + ++ + E+ K +S G+ +A + +D
Sbjct: 100 LVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEH-KIKQLSAGSNTSAALTED 158
Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHT 469
G++F WG N GQ+GL +V + +P QVTI G ++CG++H+
Sbjct: 159 GRLFMWGDNSEGQIGLKNVSNVCVPQQVTI-GKPVSWISCGYYHS 202
Score = 162 (62.1 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 53/183 (28%), Positives = 88/183 (48%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST--DDELSPNCVSSLLGIQIEG 356
G V I+CG HSA +T G L FG G+ G + + +P VS + I+
Sbjct: 189 GKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVIQ- 247
Query: 357 VAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETL-PRLLDAPSLENVHSKSVSCGA 415
VA G HT+ ++ + VY ET P++++ ++ + +SCG
Sbjct: 248 VACGGEHTVVLTENA-VYTFGLGQFGQLGLGTFLFETSEPKVIE--NIRDQTISYISCGE 304
Query: 416 RHTAVIADDGKVFCWGWNKYGQLGLG--DVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
HTA+I D G ++ +G ++G+LGLG + + IP+ + + + VACG H ++
Sbjct: 305 NHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVF 364
Query: 473 AVP 475
A P
Sbjct: 365 AAP 367
Score = 131 (51.2 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 45/176 (25%), Positives = 83/176 (47%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGI-QIEGVAAG 360
VK ACG H+ V T+ G + G GQ G G T++ + + +S +I+ ++AG
Sbjct: 89 VKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAG 148
Query: 361 LWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
+ ++ DG ++ +P+ + ++ S +SCG H+A
Sbjct: 149 SNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQV---TIGKPVSW-ISCGYYHSAF 204
Query: 421 IADDGKVFCWGWNKYGQLGL-GDVIDRNIPSQVTIEGCVPRNV---ACGWWHTLLL 472
+ DG+++ +G + G+LGL ++ + Q+ E +P V ACG HT++L
Sbjct: 205 VTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSE--IPEKVIQVACGGEHTVVL 258
Score = 69 (29.3 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 32/108 (29%), Positives = 48/108 (44%)
Query: 54 CG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPT-EASIVK-AAAGWAH 109
CG + ++ + KL +GS ++ GQ + G I +P + + VK AA G H
Sbjct: 42 CGDEHSAVVTGNNKLYMFGS-NNWGQ--LGLGSKSAISKPTCVKALKPEKVKLAACGRNH 98
Query: 110 CVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTE 157
+ TEGG VY G G G L G +++ F S F +E
Sbjct: 99 TLVSTEGGNVYATG-------GNNEGQLGLGDTEERNTFHVISFFTSE 139
Score = 49 (22.3 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 96 TEASIVKAAAGWAHCVAVTEGGEVYTWG 123
+E I + +AG A+TE G ++ WG
Sbjct: 138 SEHKIKQLSAGSNTSAALTEDGRLFMWG 165
>TAIR|locus:2092190 [details] [associations]
symbol:AT3G26100 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686
EMBL:AB023041 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 HSSP:P18754
EMBL:AK230272 IPI:IPI00540426 RefSeq:NP_974362.1 UniGene:At.25510
UniGene:At.69016 ProteinModelPortal:Q9LU80 SMR:Q9LU80 STRING:Q9LU80
PRIDE:Q9LU80 EnsemblPlants:AT3G26100.2 GeneID:822208
KEGG:ath:AT3G26100 TAIR:At3g26100 HOGENOM:HOG000070923
InParanoid:Q9LU80 OMA:LACQPNG PhylomeDB:Q9LU80
ProtClustDB:CLSN2688790 Genevestigator:Q9LU80 Uniprot:Q9LU80
Length = 532
Score = 204 (76.9 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 59/175 (33%), Positives = 82/175 (46%)
Query: 308 GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI 367
G HS +T G + TFG+ GQ G G T+DE V SL G++I AAG T+ I
Sbjct: 151 GPGHSVAVTSKGEVYTFGYNNSGQLGHGHTEDEARIQPVRSLQGVRIIQAAAGAARTMLI 210
Query: 368 SSDGDVYAXXXXXXXXXXXXXDQAE--TLPRLLDAPSLENVHSKSVSCGARHTAVIADDG 425
S DG VYA + T P+L+ SL+N+ + G TAV++ +G
Sbjct: 211 SDDGKVYACGKESFGEAEYGGQGTKPVTTPQLVT--SLKNIFVVQAAIGNYFTAVLSREG 268
Query: 426 KVFCWGWNKYGQLG----LGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAVPP 476
KV+ + W G+LG DV R P +E +A G+ + L LA P
Sbjct: 269 KVYTFSWGNDGRLGHQTEAADVEPR--PLLGPLENVPVVQIAAGYCYLLALACQP 321
Score = 180 (68.4 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 50/205 (24%), Positives = 92/205 (44%)
Query: 257 SRIRMVSSPHPI-PCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVI 315
+R ++S + C + S+G+ V + + +V A G +AV+
Sbjct: 205 ARTMLISDDGKVYACGKESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQAAIGNYFTAVL 264
Query: 316 TDAGALLTFGWGLYGQCGQGSTDDELSPN-CVSSLLGIQIEGVAAGLWHTICISS--DG- 371
+ G + TF WG G+ G + ++ P + L + + +AAG + + ++ +G
Sbjct: 265 SREGKVYTFSWGNDGRLGHQTEAADVEPRPLLGPLENVPVVQIAAGYCYLLALACQPNGM 324
Query: 372 DVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWG 431
VY+ E PR+++ + N+ + V+ GA H AV+ DG+V WG
Sbjct: 325 SVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGAWHAAVVGQDGRVCTWG 384
Query: 432 WNKYGQLGLGDVIDRNIPSQVTIEG 456
W +YG LG G+ ++P +EG
Sbjct: 385 WGRYGCLGHGNEECESVPK--VVEG 407
Score = 170 (64.9 bits), Expect = 1.8e-13, Sum P(3) = 1.8e-13
Identities = 50/167 (29%), Positives = 76/167 (45%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
+A G H+AV+ G + T+GWG YG G G+ + E P V L ++ VA G + T
Sbjct: 364 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVEGLSHVKAVHVATGDYTT 423
Query: 365 ICISSDGDVYAXXXXXXXXXX---XXXDQAETLPRLLD---APSLENVHSKSVSCGAR-- 416
+S DGDVY+ +Q +L SL+ V+ + V
Sbjct: 424 FVVSDDGDVYSFGCGESASLGHHPSFDEQGNRHANVLSPTVVTSLKQVNERMVQISLTNS 483
Query: 417 -----HTAVIADDGKVFCWGWNKYGQLG--LG-DVIDRNIPSQVTIE 455
HT + + GK+F +G GQLG LG + +R +P +V I+
Sbjct: 484 IYWNAHTFALTESGKLFAFGAGDQGQLGTELGKNQKERCVPEKVDID 530
Score = 156 (60.0 bits), Expect = 8.1e-11, Sum P(2) = 8.1e-11
Identities = 59/211 (27%), Positives = 87/211 (41%)
Query: 274 SYGKDRSAALSRGSVNSEG---PGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
++G + S L G E P + G + A G + +I+D G + G +G
Sbjct: 166 TFGYNNSGQLGHGHTEDEARIQPVRSLQGVRIIQAAAGAARTMLISDDGKVYACGKESFG 225
Query: 331 QC---GQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXX 387
+ GQG T +P V+SL I + A G + T +S +G VY
Sbjct: 226 EAEYGGQG-TKPVTTPQLVTSLKNIFVVQAAIGNYFTAVLSREGKVYTFSWGNDGRLGHQ 284
Query: 388 XDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIA--DDG-KVFCWGWNKYGQLGLGDVI 444
+ A+ PR L P LENV ++ G + +A +G V+ G G+LG G
Sbjct: 285 TEAADVEPRPLLGP-LENVPVVQIAAGYCYLLALACQPNGMSVYSVGCGLGGKLGHGSRT 343
Query: 445 DRNIP---SQVTIEGCVPRNVACGWWHTLLL 472
D P Q I PR VA G WH ++
Sbjct: 344 DEKYPRVIEQFQILNLQPRVVAAGAWHAAVV 374
Score = 148 (57.2 bits), Expect = 6.1e-11, Sum P(3) = 6.1e-11
Identities = 36/122 (29%), Positives = 60/122 (49%)
Query: 320 ALLTFGWGLYGQCGQGSTDDELSPNCVSS--LLGIQIEGVAAGLWHTICISSDGDVYAXX 377
++ + G GL G+ G GS DE P + +L +Q VAAG WH + DG V
Sbjct: 325 SVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGAWHAAVVGQDGRVCTWG 384
Query: 378 XXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQ 437
++ E++P++++ L +V + V+ G T V++DDG V+ +G +
Sbjct: 385 WGRYGCLGHGNEECESVPKVVEG--LSHVKAVHVATGDYTTFVVSDDGDVYSFGCGESAS 442
Query: 438 LG 439
LG
Sbjct: 443 LG 444
Score = 69 (29.3 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 14/23 (60%), Positives = 17/23 (73%)
Query: 102 KAAAGWAHCVAVTEGGEVYTWGW 124
+A AG H VAVT GEVYT+G+
Sbjct: 147 QAVAGPGHSVAVTSKGEVYTFGY 169
Score = 65 (27.9 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
Identities = 21/76 (27%), Positives = 39/76 (51%)
Query: 53 GCGFAMAISDSRKLITWG--STDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
G G ++A++ ++ T+G ++ LG + I +P I++AAAG A
Sbjct: 151 GPGHSVAVTSKGEVYTFGYNNSGQLGHGHTED--EARI-QPVRSLQGVRIIQAAAGAART 207
Query: 111 VAVTEGGEVYTWGWKE 126
+ +++ G+VY G KE
Sbjct: 208 MLISDDGKVYACG-KE 222
Score = 63 (27.2 bits), Expect = 8.8e-12, Sum P(2) = 8.8e-12
Identities = 23/76 (30%), Positives = 33/76 (43%)
Query: 53 GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFP-LPTEAS---IVKAAAGWA 108
G M ISD K+ G + G++ G G P P L T +V+AA G
Sbjct: 203 GAARTMLISDDGKVYACGK-ESFGEAEY--GGQGTKPVTTPQLVTSLKNIFVVQAAIGNY 259
Query: 109 HCVAVTEGGEVYTWGW 124
++ G+VYT+ W
Sbjct: 260 FTAVLSREGKVYTFSW 275
Score = 48 (22.0 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 220 GVRIATVAAGGRHTLALSD 238
GVRI AAG T+ +SD
Sbjct: 194 GVRIIQAAAGAARTMLISD 212
>UNIPROTKB|Q9N1T2 [details] [associations]
symbol:RPGR "X-linked retinitis pigmentosa GTPase
regulator" species:9615 "Canis lupus familiaris" [GO:0036126 "sperm
flagellum" evidence=ISS] [GO:0036064 "cilium basal body"
evidence=ISS] [GO:0042073 "intraflagellar transport" evidence=ISS]
[GO:0042384 "cilium assembly" evidence=ISS] [GO:0005813
"centrosome" evidence=ISS] [GO:0007601 "visual perception"
evidence=ISS] [GO:0005794 "Golgi apparatus" evidence=ISS]
[GO:0035085 "cilium axoneme" evidence=IEA] [GO:0050896 "response to
stimulus" evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005794 GO:GO:0005813 GO:GO:0007601 GO:GO:0050896
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
GO:GO:0042384 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042073 eggNOG:COG5184 GO:GO:0036064
GO:GO:0036126 EMBL:AF148798 EMBL:AF148799 EMBL:AF148800
EMBL:AF148801 RefSeq:NP_001003126.1 UniGene:Cfa.3592
ProteinModelPortal:Q9N1T2 STRING:Q9N1T2 GeneID:403726
KEGG:cfa:403726 CTD:6103 HOGENOM:HOG000231314 HOVERGEN:HBG026899
InParanoid:Q9N1T2 NextBio:20817229 Uniprot:Q9N1T2
Length = 1003
Score = 218 (81.8 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 50/165 (30%), Positives = 83/165 (50%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
++CG H+AV+T L FG +GQ G GS P CV +L +++ A G HT
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT 99
Query: 365 ICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
+ + G VYA + + L+ + + K +S G+ +A + +D
Sbjct: 100 LVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQR-KIKQLSAGSNTSAALTED 158
Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHT 469
G++F WG N GQ+GL +V + +P QVT+ G ++CG++H+
Sbjct: 159 GELFMWGDNSEGQIGLENVTNVCVPQQVTV-GKPISWISCGYYHS 202
Score = 167 (63.8 bits), Expect = 9.4e-11, Sum P(2) = 9.4e-11
Identities = 53/186 (28%), Positives = 91/186 (48%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL-----SPNCVSSLLGIQ 353
G + I+CG HSA +T G L TFG +CG+ ++L P V + G
Sbjct: 189 GKPISWISCGYYHSAFVTTEGQLYTFG---EPECGKLGLPNQLLVNHRMPQPVPGIPGKV 245
Query: 354 IEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAET-LPRLLDAPSLENVHSKSVS 412
++ VA G HT+ ++ VY ET +P+ ++ +++ ++
Sbjct: 246 VQ-VACGGGHTVVLTEKA-VYTFGLGQFGQLGLGTFLFETSVPKAIE--HIKDQKISFIA 301
Query: 413 CGARHTAVIADDGKVFCWGWNKYGQLGLG--DVIDRNIPSQVT-IEGCVPRNVACGWWHT 469
CG HTA+I D G ++ +G ++G+LGLG + ++ IP+ + + + V+CG HT
Sbjct: 302 CGENHTALITDMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGGCHT 361
Query: 470 LLLAVP 475
L+ A P
Sbjct: 362 LVFATP 367
Score = 144 (55.7 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 45/175 (25%), Positives = 84/175 (48%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ-IEGVAAG 360
VK ACG H+ V T+ G + G GQ G G T++ + + +S + I+ ++AG
Sbjct: 89 VKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAG 148
Query: 361 LWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
+ ++ DG+++ +P+ + +SCG H+A
Sbjct: 149 SNTSAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVGK----PISWISCGYYHSAF 204
Query: 421 IADDGKVFCWGWNKYGQLGLGD--VIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
+ +G+++ +G + G+LGL + +++ +P V I G V + VACG HT++L
Sbjct: 205 VTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPGKVVQ-VACGGGHTVVL 258
Score = 64 (27.6 bits), Expect = 9.4e-11, Sum P(2) = 9.4e-11
Identities = 30/108 (27%), Positives = 47/108 (43%)
Query: 54 CG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPT-EASIVK-AAAGWAH 109
CG ++ + KL +GS ++ GQ + G + +P + + VK AA G H
Sbjct: 42 CGDEHTAVVTGNNKLYMFGS-NNWGQ--LGLGSKSTVSKPTCVKALKPEKVKFAACGRNH 98
Query: 110 CVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTE 157
+ TEGG+VY G G G L G ++ F S F ++
Sbjct: 99 TLVSTEGGKVYAAG-------GNNEGQLGLGDTEERSTFHLISFFTSQ 139
Score = 52 (23.4 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 96 TEASIVKAAAGWAHCVAVTEGGEVYTWG 123
++ I + +AG A+TE GE++ WG
Sbjct: 138 SQRKIKQLSAGSNTSAALTEDGELFMWG 165
>RGD|1308467 [details] [associations]
symbol:Rcbtb1 "regulator of chromosome condensation (RCC1) and
BTB (POZ) domain containing protein 1" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=IEA;ISO]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 RGD:1308467 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:CH474049
GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494 OMA:NCSNCLG
OrthoDB:EOG4MSCXX IPI:IPI00364409 RefSeq:NP_001101850.1
UniGene:Rn.229110 Ensembl:ENSRNOT00000037800 GeneID:361050
KEGG:rno:361050 UCSC:RGD:1308467 NextBio:675026 Uniprot:D4AD40
Length = 531
Score = 212 (79.7 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 51/177 (28%), Positives = 90/177 (50%)
Query: 299 GNYVKGIACG-GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCV-SSLLGIQIEG 356
G +K ++ G G H + T+ G + +G Y Q G G+T+ ++P V ++LL Q+
Sbjct: 73 GKRIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLVKQVVE 132
Query: 357 VAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGAR 416
VA G H++ +++DG+++A + PR + L +++CG
Sbjct: 133 VACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKV-TNCLHTKKVVNIACGQT 191
Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
+ + D G+V+ WG+N GQLGLG+ ++ P +V + G + CG+ HTL L
Sbjct: 192 SSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGVCVNQIVCGYAHTLAL 248
Score = 205 (77.2 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 60/217 (27%), Positives = 96/217 (44%)
Query: 263 SSPHPIPCIES----SYGKDRSAALSRGSVNSEGPGFRVPGNY-VKGI---ACGGRHSAV 314
S PH + E ++G + + L G+ N +V N VK + ACG HS
Sbjct: 83 SGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLVKQVVEVACGSHHSMA 142
Query: 315 ITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ-IEGVAAGLWHTICISSDGDV 373
+ G L +G+ GQ G GST ++ +P V++ L + + +A G ++ + G+V
Sbjct: 143 LAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKKVVNIACGQTSSMAVLDSGEV 202
Query: 374 YAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWN 433
Y + + P + +L V + CG HT + D+G ++ WG N
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTP--VRVAALHGVCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 434 KYGQLGLGDVIDRNIPSQVTIEG-CVPRNVACGWWHT 469
YGQLG G + P+Q+ +E V AC HT
Sbjct: 261 TYGQLGTGSKNNLLSPTQIMVEKERVIEIAACHSTHT 297
Score = 167 (63.8 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 45/157 (28%), Positives = 71/157 (45%)
Query: 315 ITDAGALLTFGWGLYGQC-GQGSTDDELSPNCVSSLLGIQIEGVAAGLW-HTICISSDGD 372
+TD+ + FG Y C G G L P + +L G +I+ ++ G H + + DG
Sbjct: 37 VTDSDEVFVFGLN-YSNCLGTGDNQSTLVPKKLEALCGKRIKSLSYGSGPHVLLSTEDGV 95
Query: 373 VYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGW 432
VYA P + +L V+CG+ H+ +A DG++F WG+
Sbjct: 96 VYAWGHNGYSQLGNGTTNQGIAP-IQVCTNLLVKQVVEVACGSHHSMALAADGELFAWGY 154
Query: 433 NKYGQLGLGDVIDRNIPSQVTIEGCVPR----NVACG 465
N GQ+G G ++ P +VT C+ N+ACG
Sbjct: 155 NNCGQVGSGSTANQPTPRKVT--NCLHTKKVVNIACG 189
Score = 133 (51.9 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 37/133 (27%), Positives = 60/133 (45%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYG--QCGQGSTDDELSPNCVSSLLGIQIEGVAA 359
V IACG S + D+G + +GWG G Q G G+ ++L+P V++L G+ + +
Sbjct: 183 VVNIACGQTSSMAVLDSGEV--YGWGYNGNGQLGLGNNGNQLTPVRVAALHGVCVNQIVC 240
Query: 360 GLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHT- 418
G HT+ ++ +G +YA P + E V + +C + HT
Sbjct: 241 GYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQIMVEK-ERV-IEIAACHSTHTS 298
Query: 419 AVIADDGKVFCWG 431
A G V+ WG
Sbjct: 299 AAKTQGGHVYMWG 311
Score = 127 (49.8 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 38/135 (28%), Positives = 59/135 (43%)
Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDA 400
LSP S+ + G++A I ++ +V+ +Q+ +P+ L+A
Sbjct: 13 LSPQETGSIRKACVFGISAS--EAIYVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLEA 70
Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPR 460
+ + S S G H + +DG V+ WG N Y QLG G P QV V +
Sbjct: 71 LCGKRIKSLSYGSGP-HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLVKQ 129
Query: 461 --NVACGWWHTLLLA 473
VACG H++ LA
Sbjct: 130 VVEVACGSHHSMALA 144
Score = 101 (40.6 bits), Expect = 3.5e-07, Sum P(3) = 3.5e-07
Identities = 33/104 (31%), Positives = 46/104 (44%)
Query: 275 YGKDRSAALSRGSVNSEGPGFRVP---GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
+G + + L G+ ++ RV G V I CG H+ +TD G L +G YGQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHGVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 332 CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGD-VY 374
G GS ++ LSP + IE A HT + G VY
Sbjct: 265 LGTGSKNNLLSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVY 308
Score = 94 (38.1 bits), Expect = 3.5e-07, Sum P(3) = 3.5e-07
Identities = 34/118 (28%), Positives = 50/118 (42%)
Query: 13 VVFMWG---YLPGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITW 69
VV+ WG Y + ++P+ V L V CG +MA++ +L W
Sbjct: 95 VVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLVKQVVEVACGSH--HSMALAADGELFAW 152
Query: 70 GSTDDLGQSYVTSGKHGEIPEPFPLPT---EASIVKAAAGWAHCVAVTEGGEVYTWGW 124
G ++ GQ V SG P P + +V A G +AV + GEVY WG+
Sbjct: 153 GY-NNCGQ--VGSGSTANQPTPRKVTNCLHTKKVVNIACGQTSSMAVLDSGEVYGWGY 207
Score = 73 (30.8 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 23/86 (26%), Positives = 37/86 (43%)
Query: 51 GGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEA---SIVKAAAGW 107
G G ++ D + WG G S + +G + P + T +V+ A G
Sbjct: 82 GSGPHVLLSTEDG-VVYAWGHN---GYSQLGNGTTNQGIAPIQVCTNLLVKQVVEVACGS 137
Query: 108 AHCVAVTEGGEVYTWGWKEC--VPSG 131
H +A+ GE++ WG+ C V SG
Sbjct: 138 HHSMALAADGELFAWGYNNCGQVGSG 163
Score = 38 (18.4 bits), Expect = 3.5e-07, Sum P(3) = 3.5e-07
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 398 LDAPSLENVHSKSVSCGA 415
+D P L+ +K+ CGA
Sbjct: 511 MDGPLLKEFIAKASKCGA 528
>MGI|MGI:1918580 [details] [associations]
symbol:Rcbtb1 "regulator of chromosome condensation (RCC1)
and BTB (POZ) domain containing protein 1" species:10090 "Mus
musculus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] InterPro:IPR000210 InterPro:IPR013069
Pfam:PF00651 PROSITE:PS50097 SMART:SM00225 MGI:MGI:1918580
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0007049 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104208 CTD:55213 HOGENOM:HOG000065752
HOVERGEN:HBG053261 KO:K11494 OrthoDB:EOG4MSCXX EMBL:AK033501
EMBL:AK088299 EMBL:BC067005 IPI:IPI00469440 RefSeq:NP_082040.2
UniGene:Mm.234195 ProteinModelPortal:Q6NXM2 SMR:Q6NXM2
IntAct:Q6NXM2 STRING:Q6NXM2 PhosphoSite:Q6NXM2 PaxDb:Q6NXM2
PRIDE:Q6NXM2 Ensembl:ENSMUST00000022551 Ensembl:ENSMUST00000043227
GeneID:71330 KEGG:mmu:71330 UCSC:uc007ueb.2 InParanoid:Q6NXM2
NextBio:333557 Bgee:Q6NXM2 Genevestigator:Q6NXM2
GermOnline:ENSMUSG00000035469 Uniprot:Q6NXM2
Length = 531
Score = 212 (79.7 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 51/177 (28%), Positives = 90/177 (50%)
Query: 299 GNYVKGIACG-GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCV-SSLLGIQIEG 356
G +K ++ G G H + T+ G + +G Y Q G G+T+ ++P V ++LL Q+
Sbjct: 73 GKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIE 132
Query: 357 VAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGAR 416
VA G H++ +++DG+++A + PR + L +++CG
Sbjct: 133 VACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKV-TNCLHTKRVVNIACGQT 191
Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
+ + D G+V+ WG+N GQLGLG+ ++ P +V + G + CG+ HTL L
Sbjct: 192 SSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLAL 248
Score = 200 (75.5 bits), Expect = 5.2e-13, P = 5.2e-13
Identities = 58/217 (26%), Positives = 96/217 (44%)
Query: 263 SSPHPIPCIES----SYGKDRSAALSRGSVNSEGPGFRVPGNY-VKGI---ACGGRHSAV 314
S PH + E ++G + + L G+ N +V N +K + ACG HS
Sbjct: 83 SGPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMA 142
Query: 315 ITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ-IEGVAAGLWHTICISSDGDV 373
+ G L +G+ GQ G GST ++ +P V++ L + + +A G ++ + G+V
Sbjct: 143 LAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEV 202
Query: 374 YAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWN 433
Y + + P + +L + + CG HT + D+G ++ WG N
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTP--VRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 434 KYGQLGLGDVIDRNIPSQVTIEG-CVPRNVACGWWHT 469
YGQLG G + P+Q+ +E V AC HT
Sbjct: 261 TYGQLGTGSKNNLLSPTQIMVEKERVIEIAACHSTHT 297
Score = 163 (62.4 bits), Expect = 7.1e-09, P = 7.1e-09
Identities = 45/157 (28%), Positives = 70/157 (44%)
Query: 315 ITDAGALLTFGWGLYGQC-GQGSTDDELSPNCVSSLLGIQIEGVAAGLW-HTICISSDGD 372
+TD + FG Y C G G L P + +L G +I+ ++ G H + + DG
Sbjct: 37 VTDNDEVFVFGLN-YSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTEDGV 95
Query: 373 VYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGW 432
VYA P + +L V+CG+ H+ +A DG++F WG+
Sbjct: 96 VYAWGHNGYSQLGNGTTNQGIAPVQV-CTNLLIKQVIEVACGSHHSMALAADGELFAWGY 154
Query: 433 NKYGQLGLGDVIDRNIPSQVTIEGCVPR----NVACG 465
N GQ+G G ++ P +VT C+ N+ACG
Sbjct: 155 NNCGQVGSGSTANQPTPRKVT--NCLHTKRVVNIACG 189
Score = 131 (51.2 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 37/133 (27%), Positives = 60/133 (45%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYG--QCGQGSTDDELSPNCVSSLLGIQIEGVAA 359
V IACG S + D+G + +GWG G Q G G+ ++L+P V++L G+ + +
Sbjct: 183 VVNIACGQTSSMAVLDSGEV--YGWGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVC 240
Query: 360 GLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHT- 418
G HT+ ++ +G +YA P + E V + +C + HT
Sbjct: 241 GYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQIMVEK-ERV-IEIAACHSTHTS 298
Query: 419 AVIADDGKVFCWG 431
A G V+ WG
Sbjct: 299 AAKTQGGHVYMWG 311
Score = 125 (49.1 bits), Expect = 0.00011, P = 0.00011
Identities = 37/135 (27%), Positives = 59/135 (43%)
Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDA 400
LSP S+ + G +A I ++ + +V+ +Q+ +P+ L+A
Sbjct: 13 LSPQEAGSIRKACVFGTSAN--EAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEA 70
Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPR 460
+ + S S G H + +DG V+ WG N Y QLG G P QV + +
Sbjct: 71 LCGKKIKSLSYGSGP-HVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQ 129
Query: 461 --NVACGWWHTLLLA 473
VACG H++ LA
Sbjct: 130 VIEVACGSHHSMALA 144
Score = 102 (41.0 bits), Expect = 5.3e-07, Sum P(3) = 5.3e-07
Identities = 33/104 (31%), Positives = 46/104 (44%)
Query: 275 YGKDRSAALSRGSVNSEGPGFRVP---GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
+G + + L G+ ++ RV G V I CG H+ +TD G L +G YGQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 332 CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGD-VY 374
G GS ++ LSP + IE A HT + G VY
Sbjct: 265 LGTGSKNNLLSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVY 308
Score = 91 (37.1 bits), Expect = 5.3e-07, Sum P(3) = 5.3e-07
Identities = 33/118 (27%), Positives = 50/118 (42%)
Query: 13 VVFMWG---YLPGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITW 69
VV+ WG Y + ++P+ V L + CG +MA++ +L W
Sbjct: 95 VVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSH--HSMALAADGELFAW 152
Query: 70 GSTDDLGQSYVTSGKHGEIPEPFPLPT---EASIVKAAAGWAHCVAVTEGGEVYTWGW 124
G ++ GQ V SG P P + +V A G +AV + GEVY WG+
Sbjct: 153 GY-NNCGQ--VGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGY 207
Score = 71 (30.1 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 22/100 (22%), Positives = 41/100 (41%)
Query: 37 RLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPT 96
+L G + + G + ++ + WG G S + +G + P + T
Sbjct: 67 KLEALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHN---GYSQLGNGTTNQGIAPVQVCT 123
Query: 97 EA---SIVKAAAGWAHCVAVTEGGEVYTWGWKEC--VPSG 131
+++ A G H +A+ GE++ WG+ C V SG
Sbjct: 124 NLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSG 163
Score = 38 (18.4 bits), Expect = 5.3e-07, Sum P(3) = 5.3e-07
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 398 LDAPSLENVHSKSVSCGA 415
+D P L+ +K+ CGA
Sbjct: 511 MDGPLLKEFIAKASKCGA 528
>UNIPROTKB|F1PV11 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494 OMA:NCSNCLG
EMBL:AAEX03013105 RefSeq:XP_542558.2 Ensembl:ENSCAFT00000006979
GeneID:485440 KEGG:cfa:485440 Uniprot:F1PV11
Length = 531
Score = 212 (79.7 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 59/217 (27%), Positives = 99/217 (45%)
Query: 263 SSPHPIPCIES----SYGKDRSAALSRGSVNSEGPGFRVPGNY----VKGIACGGRHSAV 314
S PH + E ++G + + L G+ N +V N V +ACG HS
Sbjct: 83 SGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMA 142
Query: 315 ITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ-IEGVAAGLWHTICISSDGDV 373
+ G + +G+ GQ G GST ++ +P V++ L I+ + G+A G ++ + +G+V
Sbjct: 143 LAADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEV 202
Query: 374 YAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWN 433
Y + + P + +L +V + CG HT + D+G ++ WG N
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTP--VRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 434 KYGQLGLGDVIDRNIPSQVTIEG-CVPRNVACGWWHT 469
YGQLG G+ + P+ + +E V AC HT
Sbjct: 261 TYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHT 297
Score = 206 (77.6 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 53/178 (29%), Positives = 90/178 (50%)
Query: 299 GNYVKGIACG-GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCV-SSLLGIQIEG 356
G +K ++ G G H + T+ G + +G Y Q G G+T+ ++P V ++LL Q+
Sbjct: 73 GKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVE 132
Query: 357 VAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGAR 416
VA G H++ +++DG+V+A + PR + L ++CG
Sbjct: 133 VACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQPTPRKV-TNCLHIKRVVGIACGQT 191
Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI--EGCVPRNVACGWWHTLLL 472
+ + D+G+V+ WG+N GQLGLG+ ++ P +V CV + CG+ HTL L
Sbjct: 192 SSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCV-NQIVCGYAHTLAL 248
Score = 163 (62.4 bits), Expect = 7.1e-09, P = 7.1e-09
Identities = 46/157 (29%), Positives = 70/157 (44%)
Query: 315 ITDAGALLTFGWGLYGQC-GQGSTDDELSPNCVSSLLGIQIEGVAAGLW-HTICISSDGD 372
+TD + FG Y C G G L P + +L G +I+ ++ G H + + DG
Sbjct: 37 VTDNDEVFVFGLN-YSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGV 95
Query: 373 VYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGW 432
VYA P + +L V+CG+ H+ +A DG+VF WG+
Sbjct: 96 VYAWGHNGYSQLGNGTTNQGIAP-IQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGY 154
Query: 433 NKYGQLGLGDVIDRNIPSQVTIEGC--VPR--NVACG 465
N GQ+G G ++ P +VT C + R +ACG
Sbjct: 155 NNCGQVGSGSTTNQPTPRKVT--NCLHIKRVVGIACG 189
Score = 128 (50.1 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 37/133 (27%), Positives = 59/133 (44%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYG--QCGQGSTDDELSPNCVSSLLGIQIEGVAA 359
V GIACG S + D G + +GWG G Q G G+ ++L+P V++L + + +
Sbjct: 183 VVGIACGQTSSMAVLDNGEV--YGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVC 240
Query: 360 GLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHT- 418
G HT+ ++ +G +YA P + E V + +C + HT
Sbjct: 241 GYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVEK-ERV-VEIAACHSAHTS 298
Query: 419 AVIADDGKVFCWG 431
A G V+ WG
Sbjct: 299 AAKTQGGHVYMWG 311
Score = 126 (49.4 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 36/135 (26%), Positives = 61/135 (45%)
Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDA 400
LSP ++S+ + G +A + ++ + +V+ +Q+ +P+ L+A
Sbjct: 13 LSPQEIASIRKACVFGTSAN--EALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEA 70
Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPR 460
+ + S S G H + +DG V+ WG N Y QLG G P QV + +
Sbjct: 71 LCGKKIKSLSYGSGP-HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQ 129
Query: 461 --NVACGWWHTLLLA 473
VACG H++ LA
Sbjct: 130 VVEVACGSHHSMALA 144
Score = 76 (31.8 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 24/86 (27%), Positives = 37/86 (43%)
Query: 51 GGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEA---SIVKAAAGW 107
G G ++ D + WG G S + +G + P + T +V+ A G
Sbjct: 82 GSGPHVLLSTEDG-VVYAWGHN---GYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGS 137
Query: 108 AHCVAVTEGGEVYTWGWKEC--VPSG 131
H +A+ GEV+ WG+ C V SG
Sbjct: 138 HHSMALAADGEVFAWGYNNCGQVGSG 163
Score = 43 (20.2 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 203 SGDENLSAFPCLVTLNPGVR-IATVAAGGRHTLALS 237
+G N P V N ++ + VA G H++AL+
Sbjct: 109 NGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALA 144
>TAIR|locus:2144291 [details] [associations]
symbol:AT5G11580 "AT5G11580" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008536 "Ran GTPase binding" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 HSSP:P18754 EMBL:AY058861 EMBL:AY079040
IPI:IPI00537184 RefSeq:NP_568250.1 UniGene:At.5137 UniGene:At.75215
ProteinModelPortal:Q93Z10 SMR:Q93Z10 PRIDE:Q93Z10
EnsemblPlants:AT5G11580.1 GeneID:831030 KEGG:ath:AT5G11580
TAIR:At5g11580 InParanoid:Q93Z10 OMA:WTFGLGD PhylomeDB:Q93Z10
ProtClustDB:CLSN2689608 Genevestigator:Q93Z10 Uniprot:Q93Z10
Length = 553
Score = 172 (65.6 bits), Expect = 2.4e-14, Sum P(3) = 2.4e-14
Identities = 55/169 (32%), Positives = 78/169 (46%)
Query: 299 GNYVKGIACGGRHSAVIT-----DAGALL--TFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
G V IACG H+A++T G + TFG+G GQ G S P VS L
Sbjct: 262 GLTVYDIACGAHHTALLTYRKETPKGPSICWTFGFGENGQLGHRSNKSSSLPEPVSDLPE 321
Query: 352 -IQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAE------TLPRLLDAPSLE 404
+ V GL+HT +SS+G V++ + E ++PR + S
Sbjct: 322 HAYLVSVDCGLFHTSVVSSEGYVWSWGMERGLGLCPDVNFTEVEAGDDSVPRKISGGSSR 381
Query: 405 NVHSKSVSCGARHTAVIADDG-KVFCWGWNKYGQLGLGDVIDRNIPSQV 452
VSCGA HT ++ D G K++ WG + G LG G+V D +P+ V
Sbjct: 382 FRDPVQVSCGAAHTVLVVDGGYKLWSWGRGRNGVLGTGNVSDCYVPTLV 430
Score = 161 (61.7 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 36/105 (34%), Positives = 57/105 (54%)
Query: 339 DELSPNC-VSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRL 397
++ SP +S L +I +AAG HTI ++ DG VY+ + E +P L
Sbjct: 2 EDKSPTLLISEDLSRKIISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPVL 61
Query: 398 LDAPSL---ENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG 439
++ P+ + + V+ GA H+ ++DDG V+CWG+N YGQLG
Sbjct: 62 VEFPNQAEGDRIRIVGVAAGAYHSLAVSDDGSVWCWGYNIYGQLG 106
Score = 126 (49.4 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 28/75 (37%), Positives = 44/75 (58%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCV---SSLLG--IQIEGVAA 359
+A G H+ +T G + ++G G++G+ G G DEL P V + G I+I GVAA
Sbjct: 21 LAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPVLVEFPNQAEGDRIRIVGVAA 80
Query: 360 GLWHTICISSDGDVY 374
G +H++ +S DG V+
Sbjct: 81 GAYHSLAVSDDGSVW 95
Score = 124 (48.7 bits), Expect = 9.5e-09, Sum P(2) = 9.5e-09
Identities = 55/256 (21%), Positives = 100/256 (39%)
Query: 221 VRIATVAAGGRHTLALSDIXXXXXXXXXXXXXXXXXSRIRMVSSPHPIPCIESSYGKDRS 280
+++ TV AG +LA+ ++ R+ S P P P ++ +G+
Sbjct: 142 LKVCTVKAGSMMSLAIDNVGGLWMWGNVPPQDSEPDPRLSFTSIPIPFPILDF-HGR--- 197
Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
+ + + E + V + G H D L ++G +GQ G G +
Sbjct: 198 -TVLKVACGDE--------HVVALVGPGDIHKDNSYDVSVLYSWGNNHHGQLGLGDGESR 248
Query: 341 LSPNCVSSL---LGIQIEGVAAGLWHTICISSDGDV-------YAXXXXXXXXXXXXXDQ 390
P V + G+ + +A G HT ++ + + ++
Sbjct: 249 ARPQTVETFNQKSGLTVYDIACGAHHTALLTYRKETPKGPSICWTFGFGENGQLGHRSNK 308
Query: 391 AETLPR-LLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIP 449
+ +LP + D P E+ + SV CG HT+V++ +G V+ WG + GLG D N
Sbjct: 309 SSSLPEPVSDLP--EHAYLVSVDCGLFHTSVVSSEGYVWSWGMER----GLGLCPDVNFT 362
Query: 450 SQVTIEGCVPRNVACG 465
+ VPR ++ G
Sbjct: 363 EVEAGDDSVPRKISGG 378
Score = 96 (38.9 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 67/283 (23%), Positives = 108/283 (38%)
Query: 221 VRIATVAAGGRHTLALSDIXXXXXXXXXXXXXXXXXSRIRMVSSPHPIPC-IESSYGKDR 279
+RI VAAG H+LA+SD ++ PC I++ + ++
Sbjct: 73 IRIVGVAAGAYHSLAVSD------DGSVWCWGYNIYGQLGFDGENSLAPCLIKNLFERET 126
Query: 280 SAALSRGSVNSEGPGFRVPGNYVK--GIACGGRHSAVITDAGALLTFGWGLYGQCGQGST 337
S++ S+N G R G+ +K + G S I + G L + WG
Sbjct: 127 SSS----SLNDSG---REVGSDLKVCTVKAGSMMSLAIDNVGGL--WMWGNVPP-QDSEP 176
Query: 338 DDELS------PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQA 391
D LS P + G + VA G H + + GD++ +
Sbjct: 177 DPRLSFTSIPIPFPILDFHGRTVLKVACGDEHVVALVGPGDIHKDNSYDVSVLYSWGNNH 236
Query: 392 ETLPRLLDAPS------LENVHSKS------VSCGARHTAVIA-----DDGKVFCW--GW 432
L D S +E + KS ++CGA HTA++ G CW G+
Sbjct: 237 HGQLGLGDGESRARPQTVETFNQKSGLTVYDIACGAHHTALLTYRKETPKGPSICWTFGF 296
Query: 433 NKYGQLGLGDVIDRNIPSQVTI--EGCVPRNVACGWWHTLLLA 473
+ GQLG ++P V+ E +V CG +HT +++
Sbjct: 297 GENGQLGHRSNKSSSLPEPVSDLPEHAYLVSVDCGLFHTSVVS 339
Score = 89 (36.4 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 31/96 (32%), Positives = 52/96 (54%)
Query: 389 DQAETLPR-LLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL-GDVI-- 444
+++ +LP + D P E+ + SV CG HT+V++ +G V+ WG + G LGL DV
Sbjct: 307 NKSSSLPEPVSDLP--EHAYLVSVDCGLFHTSVVSSEGYVWSWGMER-G-LGLCPDVNFT 362
Query: 445 -----DRNIPSQVTIEGCV---PRNVACGWWHTLLL 472
D ++P +++ P V+CG HT+L+
Sbjct: 363 EVEAGDDSVPRKISGGSSRFRDPVQVSCGAAHTVLV 398
Score = 84 (34.6 bits), Expect = 2.4e-14, Sum P(3) = 2.4e-14
Identities = 31/108 (28%), Positives = 52/108 (48%)
Query: 53 GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGE--IPEPFPLPTEAS-----IVKAAA 105
G +A++ + +WG G+ + +GK + +P P +A IV AA
Sbjct: 24 GEAHTIALTGDGCVYSWGR-GMFGR--LGTGKESDELVPVLVEFPNQAEGDRIRIVGVAA 80
Query: 106 GWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSS 153
G H +AV++ G V+ WG+ G G+ S L K++FER++S
Sbjct: 81 GAYHSLAVSDDGSVWCWGYNIYGQLG-FDGENSLAPCLIKNLFERETS 127
Score = 74 (31.1 bits), Expect = 2.5e-13, Sum P(3) = 2.5e-13
Identities = 20/46 (43%), Positives = 26/46 (56%)
Query: 100 IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDK 145
I+ AAG AH +A+T G VY+WG G +FG L TG D+
Sbjct: 18 IISLAAGEAHTIALTGDGCVYSWG------RG-MFGRLGTGKESDE 56
Score = 61 (26.5 bits), Expect = 5.2e-12, Sum P(3) = 5.2e-12
Identities = 23/83 (27%), Positives = 36/83 (43%)
Query: 42 VGSAWRDVCG--GGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPT--E 97
VGS + VC G ++AI + L WG+ IP PFP+
Sbjct: 138 VGSDLK-VCTVKAGSMMSLAIDNVGGLWMWGNVPPQDSEPDPRLSFTSIPIPFPILDFHG 196
Query: 98 ASIVKAAAGWAHCVAVTEGGEVY 120
+++K A G H VA+ G+++
Sbjct: 197 RTVLKVACGDEHVVALVGPGDIH 219
Score = 42 (19.8 bits), Expect = 8.7e-10, Sum P(2) = 8.7e-10
Identities = 8/16 (50%), Positives = 13/16 (81%)
Query: 222 RIATVAAGGRHTLALS 237
+I ++AAG HT+AL+
Sbjct: 17 KIISLAAGEAHTIALT 32
Score = 40 (19.1 bits), Expect = 2.4e-14, Sum P(3) = 2.4e-14
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 204 GDENLSAFPCLV-TLNP--GVRIATVAAGGRHTLALS 237
GD A P V T N G+ + +A G HT L+
Sbjct: 243 GDGESRARPQTVETFNQKSGLTVYDIACGAHHTALLT 279
Score = 40 (19.1 bits), Expect = 6.9e-10, Sum P(3) = 6.9e-10
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 14 VFMWGYLPGALPQRSPILSPLVVRLPLTV-GSAWRDVCGGGCG 55
++MWG +P + P LS + +P + R V CG
Sbjct: 163 LWMWGNVPPQDSEPDPRLSFTSIPIPFPILDFHGRTVLKVACG 205
>RGD|1306897 [details] [associations]
symbol:Nek8 "NIMA-related kinase 8" species:10116 "Rattus
norvegicus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0072372
"primary cilium" evidence=IEA;ISO] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 RGD:1306897 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372
PRINTS:PR00633 PROSITE:PS50012 EMBL:CH473948 KO:K08857
GeneTree:ENSGT00700000104137 CTD:284086 OrthoDB:EOG4PZJ65
IPI:IPI00369945 RefSeq:NP_001099274.1 UniGene:Rn.144705
Ensembl:ENSRNOT00000017264 GeneID:287473 KEGG:rno:287473
NextBio:626264 Uniprot:D3ZGQ5
Length = 698
Score = 198 (74.8 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
Identities = 43/142 (30%), Positives = 71/142 (50%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
G +K +ACG +A +TD G ++TFG G G G GS D P V +LLG ++ VA
Sbjct: 396 GVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVA 455
Query: 359 AGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
G H + +S+DG+++A ++ P+ P + ++ V CG +
Sbjct: 456 CGASHVLALSADGELFAWGRGDGGRLGLGTRESHNCPQ--QVPMVPGQEAQRVVCGIDCS 513
Query: 419 AVIADDGKVFCWGWNKYGQLGL 440
++ G+V G N++ +LGL
Sbjct: 514 MILTSPGRVLACGSNRFNKLGL 535
Score = 147 (56.8 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 52/187 (27%), Positives = 78/187 (41%)
Query: 297 VPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDD--EL-SPNCVSSLL--- 350
+P V +A G A +T +G L+ + G G EL P VS L
Sbjct: 335 MPNTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGTGGGTLLPGAVELPQPQFVSRFLEGQ 394
Query: 351 -GIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSK 409
G+ I+ VA G T C++ G + + P +++A L
Sbjct: 395 SGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEA--LLGYEMV 452
Query: 410 SVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWH 468
V+CGA H ++ DG++F WG G+LGLG N P QV + G + V CG
Sbjct: 453 QVACGASHVLALSADGELFAWGRGDGGRLGLGTRESHNCPQQVPMVPGQEAQRVVCGIDC 512
Query: 469 TLLLAVP 475
+++L P
Sbjct: 513 SMILTSP 519
Score = 120 (47.3 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 35/106 (33%), Positives = 48/106 (45%)
Query: 308 GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI 367
G HSA +T +GA TFG +GQ G S +P V L GI++ VA G T+ I
Sbjct: 575 GTAHSAAVTASGACYTFGSNQHGQLGTSSRRVSRAPCRVQGLEGIKMVMVACGDAFTVAI 634
Query: 368 SSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSC 413
++G+VY+ + A LPR + SVSC
Sbjct: 635 GAEGEVYSWGKGARGRLGRRDEDAG-LPRPVQLDETHPYTVTSVSC 679
Score = 120 (47.3 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 50/208 (24%), Positives = 88/208 (42%)
Query: 274 SYGKDRSAALSRGSVNS-EGPGF--RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
++G + L GS+ P + G + +ACG H ++ G L +G G G
Sbjct: 420 TFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGASHVLALSADGELFAWGRGDGG 479
Query: 331 QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXX--X 388
+ G G+ + P V + G + + V G+ ++ ++S G V A
Sbjct: 480 RLGLGTRESHNCPQQVPMVPGQEAQRVVCGIDCSMILTSPGRVLACGSNRFNKLGLDCLS 539
Query: 389 DQAETLP--RLLDAPSLENVHS-----KSVSC---GARHTAVIADDGKVFCWGWNKYGQL 438
+ E +P ++ +A S + S +++ C G H+A + G + +G N++GQL
Sbjct: 540 LEEEPVPHQQVEEALSFTPLGSAPLDRETLLCVDLGTAHSAAVTASGACYTFGSNQHGQL 599
Query: 439 GLGDVIDRNIPSQVT-IEGCVPRNVACG 465
G P +V +EG VACG
Sbjct: 600 GTSSRRVSRAPCRVQGLEGIKMVMVACG 627
Score = 75 (31.5 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 23/74 (31%), Positives = 38/74 (51%)
Query: 54 CG--FAMAISDSRKLITWGSTDD--LGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAH 109
CG F ++D ++T+GS + LG +T I E L E +V+ A G +H
Sbjct: 404 CGDLFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEAL-LGYE--MVQVACGASH 460
Query: 110 CVAVTEGGEVYTWG 123
+A++ GE++ WG
Sbjct: 461 VLALSADGELFAWG 474
Score = 60 (26.2 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
Identities = 18/53 (33%), Positives = 22/53 (41%)
Query: 88 IPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTG 140
IP P+P +V+ AAG VT G + W E P G G L G
Sbjct: 329 IPLRLPMPN-TEVVQVAAGRTQKAGVTRSGRLILW---EAPPLGTGGGTLLPG 377
Score = 48 (22.0 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 16/71 (22%), Positives = 24/71 (33%)
Query: 53 GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
G +A+S +L WG D T H P+ P+ + G +
Sbjct: 457 GASHVLALSADGELFAWGRGDGGRLGLGTRESHN-CPQQVPMVPGQEAQRVVCGIDCSMI 515
Query: 113 VTEGGEVYTWG 123
+T G V G
Sbjct: 516 LTSPGRVLACG 526
Score = 46 (21.3 bits), Expect = 3.1e-06, Sum P(3) = 3.1e-06
Identities = 11/26 (42%), Positives = 13/26 (50%)
Query: 212 PCLVTLNPGVRIATVAAGGRHTLALS 237
P +V G + VA G H LALS
Sbjct: 440 PTIVEALLGYEMVQVACGASHVLALS 465
>UNIPROTKB|E1BKF7 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494
OMA:NCSNCLG EMBL:DAAA02032915 EMBL:DAAA02032914 IPI:IPI00826911
RefSeq:NP_001178141.1 UniGene:Bt.22187 Ensembl:ENSBTAT00000035796
GeneID:785222 KEGG:bta:785222 NextBio:20927167 Uniprot:E1BKF7
Length = 531
Score = 210 (79.0 bits), Expect = 3.9e-14, P = 3.9e-14
Identities = 59/217 (27%), Positives = 99/217 (45%)
Query: 263 SSPHPIPCIES----SYGKDRSAALSRGSVNSEGPGFRVPGNY----VKGIACGGRHSAV 314
S PH + E ++G + + L G+ N +V N V +ACG HS
Sbjct: 83 SGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMA 142
Query: 315 ITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ-IEGVAAGLWHTICISSDGDV 373
+ G + +G+ GQ G GST ++ +P V++ L I+ + G+A G ++ + +G+V
Sbjct: 143 LAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEV 202
Query: 374 YAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWN 433
Y + + P + +L +V + CG HT + D+G ++ WG N
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTP--VRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 434 KYGQLGLGDVIDRNIPSQVTIEG-CVPRNVACGWWHT 469
YGQLG G+ + P+ + +E V AC HT
Sbjct: 261 TYGQLGTGNKNNLLSPAHIMVEKERVIEIAACHSAHT 297
Score = 208 (78.3 bits), Expect = 6.6e-14, P = 6.6e-14
Identities = 54/178 (30%), Positives = 90/178 (50%)
Query: 299 GNYVKGIACG-GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCV-SSLLGIQIEG 356
G +K ++ G G H + T+ G + +G Y Q G G+T+ L+P V ++LL Q+
Sbjct: 73 GKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVE 132
Query: 357 VAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGAR 416
VA G H++ +++DG+V+A + PR + L ++CG
Sbjct: 133 VACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKV-TNCLHIKRVVGIACGQT 191
Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI--EGCVPRNVACGWWHTLLL 472
+ + D+G+V+ WG+N GQLGLG+ ++ P +V CV + CG+ HTL L
Sbjct: 192 SSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCV-NQIVCGYAHTLAL 248
Score = 165 (63.1 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 46/157 (29%), Positives = 71/157 (45%)
Query: 315 ITDAGALLTFGWGLYGQC-GQGSTDDELSPNCVSSLLGIQIEGVAAGLW-HTICISSDGD 372
+TD+ + FG Y C G G L P + +L G +I+ ++ G H + + DG
Sbjct: 37 VTDSDEVFVFGLN-YSSCLGTGDNHSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGV 95
Query: 373 VYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGW 432
VYA P + +L V+CG+ H+ +A DG+VF WG+
Sbjct: 96 VYAWGHNGYSQLGNGTTNQGLAP-IQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGY 154
Query: 433 NKYGQLGLGDVIDRNIPSQVTIEGC--VPR--NVACG 465
N GQ+G G ++ P +VT C + R +ACG
Sbjct: 155 NNCGQVGSGSTANQPTPRKVT--NCLHIKRVVGIACG 189
Score = 128 (50.1 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 37/133 (27%), Positives = 59/133 (44%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYG--QCGQGSTDDELSPNCVSSLLGIQIEGVAA 359
V GIACG S + D G + +GWG G Q G G+ ++L+P V++L + + +
Sbjct: 183 VVGIACGQTSSMAVLDNGEV--YGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVC 240
Query: 360 GLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHT- 418
G HT+ ++ +G +YA P + E V + +C + HT
Sbjct: 241 GYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVEK-ERV-IEIAACHSAHTS 298
Query: 419 AVIADDGKVFCWG 431
A G V+ WG
Sbjct: 299 AAKTQGGHVYMWG 311
Score = 122 (48.0 bits), Expect = 0.00024, P = 0.00024
Identities = 35/135 (25%), Positives = 60/135 (44%)
Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDA 400
LSP+ ++S+ + G +A + ++ +V+ + + +P+ L+A
Sbjct: 13 LSPHEIASIRKACVFGTSAN--EALYVTDSDEVFVFGLNYSSCLGTGDNHSTLVPKKLEA 70
Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPR 460
+ + S S G H + +DG V+ WG N Y QLG G P QV + +
Sbjct: 71 LCGKKIKSLSYGSGP-HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQ 129
Query: 461 --NVACGWWHTLLLA 473
VACG H++ LA
Sbjct: 130 VVEVACGSHHSMALA 144
Score = 76 (31.8 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 24/86 (27%), Positives = 37/86 (43%)
Query: 51 GGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEA---SIVKAAAGW 107
G G ++ D + WG G S + +G + P + T +V+ A G
Sbjct: 82 GSGPHVLLSTEDG-VVYAWGHN---GYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGS 137
Query: 108 AHCVAVTEGGEVYTWGWKEC--VPSG 131
H +A+ GEV+ WG+ C V SG
Sbjct: 138 HHSMALAADGEVFAWGYNNCGQVGSG 163
Score = 43 (20.2 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 203 SGDENLSAFPCLVTLNPGVR-IATVAAGGRHTLALS 237
+G N P V N ++ + VA G H++AL+
Sbjct: 109 NGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALA 144
>UNIPROTKB|Q8NDN9 [details] [associations]
symbol:RCBTB1 "RCC1 and BTB domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000210 InterPro:IPR013069
Pfam:PF00651 PROSITE:PS50097 SMART:SM00225 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0007049 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 EMBL:AL139321 EMBL:AF334406
EMBL:AJ319660 EMBL:AK096654 EMBL:AL833821 EMBL:BC038104
IPI:IPI00329626 IPI:IPI00973193 RefSeq:NP_060661.3
UniGene:Hs.508021 ProteinModelPortal:Q8NDN9 SMR:Q8NDN9
IntAct:Q8NDN9 MINT:MINT-4718485 STRING:Q8NDN9 PhosphoSite:Q8NDN9
DMDM:74751227 PRIDE:Q8NDN9 DNASU:55213 Ensembl:ENST00000258646
Ensembl:ENST00000378302 Ensembl:ENST00000546015 GeneID:55213
KEGG:hsa:55213 UCSC:uc001vde.1 CTD:55213 GeneCards:GC13M050106
HGNC:HGNC:18243 HPA:HPA045925 MIM:607867 neXtProt:NX_Q8NDN9
PharmGKB:PA134955699 HOGENOM:HOG000065752 HOVERGEN:HBG053261
InParanoid:Q8NDN9 KO:K11494 OMA:NCSNCLG OrthoDB:EOG4MSCXX
PhylomeDB:Q8NDN9 GenomeRNAi:55213 NextBio:59164 ArrayExpress:Q8NDN9
Bgee:Q8NDN9 CleanEx:HS_RCBTB1 Genevestigator:Q8NDN9
GermOnline:ENSG00000136144 Uniprot:Q8NDN9
Length = 531
Score = 210 (79.0 bits), Expect = 3.9e-14, P = 3.9e-14
Identities = 59/217 (27%), Positives = 99/217 (45%)
Query: 263 SSPHPIPCIES----SYGKDRSAALSRGSVNSEGPGFRVPGNY----VKGIACGGRHSAV 314
S PH + E ++G + + L G+ N +V N V +ACG HS
Sbjct: 83 SGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMA 142
Query: 315 ITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ-IEGVAAGLWHTICISSDGDV 373
+ G + +G+ GQ G GST ++ +P V++ L I+ + G+A G ++ + +G+V
Sbjct: 143 LAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEV 202
Query: 374 YAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWN 433
Y + + P + +L +V + CG HT + D+G ++ WG N
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTP--VRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 434 KYGQLGLGDVIDRNIPSQVTIEG-CVPRNVACGWWHT 469
YGQLG G+ + P+ + +E V AC HT
Sbjct: 261 TYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHT 297
Score = 206 (77.6 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 53/178 (29%), Positives = 90/178 (50%)
Query: 299 GNYVKGIACG-GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCV-SSLLGIQIEG 356
G +K ++ G G H + T+ G + +G Y Q G G+T+ ++P V ++LL Q+
Sbjct: 73 GKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVE 132
Query: 357 VAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGAR 416
VA G H++ +++DG+V+A + PR + L ++CG
Sbjct: 133 VACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKV-TNCLHIKRVVGIACGQT 191
Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI--EGCVPRNVACGWWHTLLL 472
+ + D+G+V+ WG+N GQLGLG+ ++ P +V CV + CG+ HTL L
Sbjct: 192 SSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCV-NQIVCGYAHTLAL 248
Score = 161 (61.7 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 46/157 (29%), Positives = 69/157 (43%)
Query: 315 ITDAGALLTFGWGLYGQC-GQGSTDDELSPNCVSSLLGIQIEGVAAGLW-HTICISSDGD 372
+TD + FG Y C G G L P + L G +I+ ++ G H + + DG
Sbjct: 37 VTDNDEVFVFGLN-YSNCLGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGV 95
Query: 373 VYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGW 432
VYA P + +L V+CG+ H+ +A DG+VF WG+
Sbjct: 96 VYAWGHNGYSQLGNGTTNQGIAPVQV-CTNLLIKQVVEVACGSHHSMALAADGEVFAWGY 154
Query: 433 NKYGQLGLGDVIDRNIPSQVTIEGC--VPR--NVACG 465
N GQ+G G ++ P +VT C + R +ACG
Sbjct: 155 NNCGQVGSGSTANQPTPRKVT--NCLHIKRVVGIACG 189
Score = 128 (50.1 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 37/133 (27%), Positives = 59/133 (44%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYG--QCGQGSTDDELSPNCVSSLLGIQIEGVAA 359
V GIACG S + D G + +GWG G Q G G+ ++L+P V++L + + +
Sbjct: 183 VVGIACGQTSSMAVLDNGEV--YGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVC 240
Query: 360 GLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHT- 418
G HT+ ++ +G +YA P + E V + +C + HT
Sbjct: 241 GYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVEK-ERV-VEIAACHSAHTS 298
Query: 419 AVIADDGKVFCWG 431
A G V+ WG
Sbjct: 299 AAKTQGGHVYMWG 311
Score = 122 (48.0 bits), Expect = 0.00024, P = 0.00024
Identities = 35/135 (25%), Positives = 60/135 (44%)
Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDA 400
LSP ++S+ + G +A + ++ + +V+ +Q+ +P+ L+
Sbjct: 13 LSPQEIASIRKACVFGTSAS--EALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEG 70
Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPR 460
+ + S S G H + +DG V+ WG N Y QLG G P QV + +
Sbjct: 71 LCGKKIKSLSYGSGP-HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQ 129
Query: 461 --NVACGWWHTLLLA 473
VACG H++ LA
Sbjct: 130 VVEVACGSHHSMALA 144
Score = 75 (31.5 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 24/86 (27%), Positives = 37/86 (43%)
Query: 51 GGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEA---SIVKAAAGW 107
G G ++ D + WG G S + +G + P + T +V+ A G
Sbjct: 82 GSGPHVLLSTEDG-VVYAWGHN---GYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGS 137
Query: 108 AHCVAVTEGGEVYTWGWKEC--VPSG 131
H +A+ GEV+ WG+ C V SG
Sbjct: 138 HHSMALAADGEVFAWGYNNCGQVGSG 163
Score = 43 (20.2 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 203 SGDENLSAFPCLVTLNPGVR-IATVAAGGRHTLALS 237
+G N P V N ++ + VA G H++AL+
Sbjct: 109 NGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALA 144
>UNIPROTKB|I3LCV3 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104208 OMA:NCSNCLG
EMBL:FP325140 Ensembl:ENSSSCT00000023143 Uniprot:I3LCV3
Length = 560
Score = 210 (79.0 bits), Expect = 4.4e-14, P = 4.4e-14
Identities = 54/178 (30%), Positives = 91/178 (51%)
Query: 299 GNYVKGIACG-GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCV-SSLLGIQIEG 356
G +K ++ G G H + T+ G + +G Y Q G G+T+ ++P V ++LL Q+
Sbjct: 102 GKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVE 161
Query: 357 VAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGAR 416
VA G H++ +++DG+V+A + PR + L S++CG
Sbjct: 162 VACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKV-TNCLHIKRVVSIACGQT 220
Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI--EGCVPRNVACGWWHTLLL 472
+ + D+G+V+ WG+N GQLGLG+ ++ P +V CV + CG+ HTL L
Sbjct: 221 SSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCV-NQIVCGYAHTLAL 277
Score = 205 (77.2 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 58/217 (26%), Positives = 98/217 (45%)
Query: 263 SSPHPIPCIES----SYGKDRSAALSRGSVNSEGPGFRVPGNY----VKGIACGGRHSAV 314
S PH + E ++G + + L G+ N +V N V +ACG HS
Sbjct: 112 SGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMA 171
Query: 315 ITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ-IEGVAAGLWHTICISSDGDV 373
+ G + +G+ GQ G GST ++ +P V++ L I+ + +A G ++ + +G+V
Sbjct: 172 LAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEV 231
Query: 374 YAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWN 433
Y + + P + +L +V + CG HT + D+G ++ WG N
Sbjct: 232 YGWGYNGNGQLGLGNNGNQLTP--VRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 289
Query: 434 KYGQLGLGDVIDRNIPSQVTIEG-CVPRNVACGWWHT 469
YGQLG G+ + P+ + +E V AC HT
Sbjct: 290 TYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHT 326
Score = 164 (62.8 bits), Expect = 6.0e-09, P = 6.0e-09
Identities = 46/157 (29%), Positives = 71/157 (45%)
Query: 315 ITDAGALLTFGWGLYGQC-GQGSTDDELSPNCVSSLLGIQIEGVAAGLW-HTICISSDGD 372
+TD + FG Y C G G L P + +L G +I+ ++ G H + + DG
Sbjct: 66 VTDNDEVFVFGLN-YSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGV 124
Query: 373 VYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGW 432
VYA P + +L V+CG+ H+ +A DG+VF WG+
Sbjct: 125 VYAWGHNGYSQLGNGTTNQGIAP-IQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGY 183
Query: 433 NKYGQLGLGDVIDRNIPSQVTIEGC--VPR--NVACG 465
N GQ+G G ++ P +VT C + R ++ACG
Sbjct: 184 NNCGQVGSGSTANQPTPRKVT--NCLHIKRVVSIACG 218
Score = 122 (48.0 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 36/133 (27%), Positives = 58/133 (43%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYG--QCGQGSTDDELSPNCVSSLLGIQIEGVAA 359
V IACG S + D G + +GWG G Q G G+ ++L+P V++L + + +
Sbjct: 212 VVSIACGQTSSMAVLDNGEV--YGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVC 269
Query: 360 GLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHT- 418
G HT+ ++ +G +YA P + E V + +C + HT
Sbjct: 270 GYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVEK-ERV-VEIAACHSAHTS 327
Query: 419 AVIADDGKVFCWG 431
A G V+ WG
Sbjct: 328 AAKTQGGHVYMWG 340
Score = 76 (31.8 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 24/86 (27%), Positives = 37/86 (43%)
Query: 51 GGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEA---SIVKAAAGW 107
G G ++ D + WG G S + +G + P + T +V+ A G
Sbjct: 111 GSGPHVLLSTEDG-VVYAWGHN---GYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGS 166
Query: 108 AHCVAVTEGGEVYTWGWKEC--VPSG 131
H +A+ GEV+ WG+ C V SG
Sbjct: 167 HHSMALAADGEVFAWGYNNCGQVGSG 192
Score = 43 (20.2 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 203 SGDENLSAFPCLVTLNPGVR-IATVAAGGRHTLALS 237
+G N P V N ++ + VA G H++AL+
Sbjct: 138 NGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALA 173
>UNIPROTKB|A7Z018 [details] [associations]
symbol:RCC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0000794 "condensed nuclear chromosome" evidence=IEA]
[GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=IEA] [GO:0051225
"spindle assembly" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031492 "nucleosomal DNA binding" evidence=IEA] [GO:0007090
"regulation of S phase of mitotic cell cycle" evidence=IEA]
[GO:0007088 "regulation of mitosis" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0007052 "mitotic spindle
organization" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0007088 GO:GO:0007059 GO:GO:0007052
GO:GO:0051225 GO:GO:0000082 GO:GO:0031965 GO:GO:0000790
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0000794
GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0007090 GO:GO:0031492
GeneTree:ENSGT00700000104160 KO:K11493 CTD:1104
HOGENOM:HOG000234341 HOVERGEN:HBG017712 OrthoDB:EOG4320Z9
EMBL:DAAA02006335 EMBL:BC153215 IPI:IPI00868581
RefSeq:NP_001098878.1 UniGene:Bt.54942 SMR:A7Z018 STRING:A7Z018
Ensembl:ENSBTAT00000032060 GeneID:534142 KEGG:bta:534142
InParanoid:A7Z018 OMA:GTESCFV NextBio:20876286 Uniprot:A7Z018
Length = 422
Score = 168 (64.2 bits), Expect = 5.2e-14, Sum P(2) = 5.2e-14
Identities = 52/172 (30%), Positives = 74/172 (43%)
Query: 307 CGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE--GVAAGLWHT 364
CG + I+ G + FG Y Q G T+ P ++S G + G HT
Sbjct: 247 CGAYFTFAISSEGHVYGFGLSNYHQLGTQGTESCFVPQNLTSFKNSTKSWVGFSGGQHHT 306
Query: 365 ICISSDGDVYAXXXXXXXXXXXXXDQAE-TLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
+C+ S+G Y+ E ++P L+ P L V SV+CGA +
Sbjct: 307 VCMDSEGKAYSLGRAEYGRLGLGEGAEEKSVPTLI--PRLPTV--SSVACGASVGYAVTK 362
Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVT---IEGCVPRNVACGWWHTLLL 472
DG+VF WG QLG G D P ++T +E V V+ G HT+LL
Sbjct: 363 DGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLL 414
Score = 161 (61.7 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 52/169 (30%), Positives = 81/169 (47%)
Query: 311 HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
H + T+ G +LT G G GQ G G E + S+ ++ A G+ HT+C+S
Sbjct: 27 HRSHGTEPGVVLTLGQGDVGQLGLGENVMERKKPALVSIPEDIVQAEAGGM-HTVCLSKS 85
Query: 371 GDVYAXX--XXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVF 428
G VY+ + +E +P +D E V VS G HTA + +DG+VF
Sbjct: 86 GQVYSFGCNDEGALGRDTSVEGSEMVPGKVDLQ--EKVIQ--VSAGDSHTAALTEDGRVF 141
Query: 429 CWGW--NKYGQLGLGDVIDRN-IPSQVTIEGCVPRNVACGWWHTLLLAV 474
WG + G +GL + + ++ +P QV + V + VA G H ++L V
Sbjct: 142 LWGSFRDNNGVIGLLEPMKKSMVPVQVQLSVPVVK-VASGNDHLVMLTV 189
Score = 127 (49.8 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 51/180 (28%), Positives = 78/180 (43%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQ---------GSTDDE--LSPNCV-----SS 348
+A G H ++T G L T G G GQ G+ G E L P CV S
Sbjct: 177 VASGNDHLVMLTVDGDLYTLGSGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGS 236
Query: 349 LLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHS 408
++ + G + T ISS+G VY ++ +P+ L S +N
Sbjct: 237 RGHVRFQDAFCGAYFTFAISSEGHVYGFGLSNYHQLGTQGTESCFVPQNLT--SFKNSTK 294
Query: 409 KSV--SCGARHTAVIADDGKVFCWGWNKYGQLGLGD-VIDRNIPSQVTIEGCVPRNVACG 465
V S G HT + +GK + G +YG+LGLG+ ++++P+ + V +VACG
Sbjct: 295 SWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSVPTLIPRLPTVS-SVACG 353
Score = 103 (41.3 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 35/125 (28%), Positives = 51/125 (40%)
Query: 308 GGRHSAVITDA-GALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVAAGLWHTI 365
GG+H V D+ G + G YG+ G G +E S P + L + VA G
Sbjct: 301 GGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSVPTLIPRLP--TVSSVACGASVGY 358
Query: 366 CISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDG 425
++ DG V+A D+ P + LEN +VS G +HT ++ D
Sbjct: 359 AVTKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLLVKD- 417
Query: 426 KVFCW 430
K W
Sbjct: 418 KEQSW 422
Score = 97 (39.2 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 50/202 (24%), Positives = 82/202 (40%)
Query: 274 SYGKDRSAALSRGSVNSEGPGFRVPGNY-----VKGIACGGRHSAVITDAGALLTFGWGL 328
S+G + AL R + + EG VPG V ++ G H+A +T+ G + F WG
Sbjct: 90 SFGCNDEGALGRDT-SVEGSEM-VPGKVDLQEKVIQVSAGDSHTAALTEDGRV--FLWGS 145
Query: 329 Y-GQCGQGSTDDELSPNCV--SSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXX 385
+ G + + + V L + + VA+G H + ++ DGD+Y
Sbjct: 146 FRDNNGVIGLLEPMKKSMVPVQVQLSVPVVKVASGNDHLVMLTVDGDLYTLGSGEQGQLG 205
Query: 386 XXXDQ------AETLPRLL--------DAPSLENVHSKSVSCGARHTAVIADDGKVFCWG 431
+ + L RLL S +V + CGA T I+ +G V+ +G
Sbjct: 206 RVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISSEGHVYGFG 265
Query: 432 WNKYGQLGLGDVIDRNIPSQVT 453
+ Y QLG +P +T
Sbjct: 266 LSNYHQLGTQGTESCFVPQNLT 287
Score = 83 (34.3 bits), Expect = 5.2e-14, Sum P(2) = 5.2e-14
Identities = 24/91 (26%), Positives = 45/91 (49%)
Query: 33 PLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPF 92
P +V +P + A GG + +S S ++ ++G D+ TS + E+ P
Sbjct: 60 PALVSIPEDIVQAE----AGGM-HTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMV-PG 113
Query: 93 PLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
+ + +++ +AG +H A+TE G V+ WG
Sbjct: 114 KVDLQEKVIQVSAGDSHTAALTEDGRVFLWG 144
Score = 80 (33.2 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 29/105 (27%), Positives = 44/105 (41%)
Query: 273 SSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
+ YG+ L G+ P R+P V +ACG +T G + +G G
Sbjct: 321 AEYGR---LGLGEGAEEKSVPTLIPRLPT--VSSVACGASVGYAVTKDGRVFAWGMGTNY 375
Query: 331 QCGQGSTDDELSPNCVSSLLGIQIEG-----VAAGLWHTICISSD 370
Q G G +D SP + G Q+E V++G HT+ + D
Sbjct: 376 QLGTGQDEDAWSP---VEMTGKQLENRVVLTVSSGGQHTVLLVKD 417
Score = 76 (31.8 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
Identities = 28/98 (28%), Positives = 44/98 (44%)
Query: 53 GCGFAMAISDSRKLITWGS-TDDLGQ-SYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
G A+++ ++ WGS D+ G + K +P L +VK A+G H
Sbjct: 127 GDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQL--SVPVVKVASGNDHL 184
Query: 111 VAVTEGGEVYTWGWKECVPSGRV---FGDLSTGTGLDK 145
V +T G++YT G E GRV F + GL++
Sbjct: 185 VMLTVDGDLYTLGSGEQGQLGRVPELFANRGGRQGLER 222
Score = 65 (27.9 bits), Expect = 1.7e-12, Sum P(3) = 1.7e-12
Identities = 23/74 (31%), Positives = 39/74 (52%)
Query: 66 LITWGSTDDLGQSYVTSGKHG-EIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGW 124
++T G D+GQ + G++ E +P + IV+A AG H V +++ G+VY++G
Sbjct: 37 VLTLGQ-GDVGQ--LGLGENVMERKKPALVSIPEDIVQAEAGGMHTVCLSKSGQVYSFG- 92
Query: 125 KECVPSGRVFGDLS 138
C G + D S
Sbjct: 93 --CNDEGALGRDTS 104
Score = 42 (19.8 bits), Expect = 9.2e-10, Sum P(2) = 9.2e-10
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 212 PCLVTLNPGVRIATVAAGGRHTLALS 237
P LV++ I AGG HT+ LS
Sbjct: 60 PALVSIPED--IVQAEAGGMHTVCLS 83
Score = 39 (18.8 bits), Expect = 1.7e-12, Sum P(3) = 1.7e-12
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 222 RIATVAAGGRHTLALSD 238
++ V+AG HT AL++
Sbjct: 120 KVIQVSAGDSHTAALTE 136
>UNIPROTKB|F1LPM8 [details] [associations]
symbol:Herc6 "Protein Herc6" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
RGD:1561739 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
EMBL:AC126722 IPI:IPI00553869 Ensembl:ENSRNOT00000058626
ArrayExpress:F1LPM8 Uniprot:F1LPM8
Length = 1036
Score = 179 (68.1 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 50/176 (28%), Positives = 83/176 (47%)
Query: 306 ACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN-CVSSLLGIQIEGVAAGLWHT 364
A G RHS ++ + + G GQ GQ S P + +L + I+ V+ G H+
Sbjct: 34 ASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEEPIQALSTVHIDLVSCGKEHS 93
Query: 365 ICISSDGDVYA-XXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
+ + G V+ + +P ++ SL + VSCG H+ +++
Sbjct: 94 VAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKIN--SLAGIKIIQVSCGHYHSLALSE 151
Query: 424 DGKVFCWGWNKYGQLGLGD-VIDRNIPSQV-TIEGCVPRNVACGWWHTLLLAVPPT 477
DG+VF WG N+ GQLGLG+ + + P +V ++EG VA G H+ L++ T
Sbjct: 152 DGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGT 207
Score = 177 (67.4 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 51/175 (29%), Positives = 84/175 (48%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDD-ELSPNCVSSLLGIQIEGVAAGLWH 363
++CG HS + G + T+G G GQ G G + + P ++SL GI+I V+ G +H
Sbjct: 86 VSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYH 145
Query: 364 TICISSDGDVYAXXXXXXXXXXXXXDQ-AETLPRLLDAPSLENVHSKSVSCGARHTAVIA 422
++ +S DG V++ + ++ P+ + SLE + V+ G H+ ++
Sbjct: 146 SLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVK--SLEGIPLAQVAAGGTHSFALS 203
Query: 423 DDGKVFCWGWNKYGQLGL-GDVID-RNIPSQVTIEGCVPRNV---ACGWWHTLLL 472
G F WG N+ GQL L G+ I +I NV +CG+ HT +L
Sbjct: 204 LMGTSFGWGNNRSGQLALSGNSAKAEQIYKPHSIGALKTLNVVYISCGYEHTSVL 258
Score = 175 (66.7 bits), Expect = 5.4e-14, Sum P(2) = 5.4e-14
Identities = 49/170 (28%), Positives = 83/170 (48%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDELSPNCVSSLLGIQIEGVAAGLWH 363
++CG HS +++ G + ++G GQ G G+ + SP V SL GI + VAAG H
Sbjct: 139 VSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTH 198
Query: 364 TICISSDGDVYAXXXXXXXXXXXXXD--QAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
+ +S G + + +AE + + +L+ ++ +SCG HT+V+
Sbjct: 199 SFALSLMGTSFGWGNNRSGQLALSGNSAKAEQIYKPHSIGALKTLNVVYISCGYEHTSVL 258
Query: 422 ADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
+DG+VF +G + QL R P + I G V + + CG +HT+
Sbjct: 259 TEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIGGHVSQ-IECGSYHTI 307
Score = 147 (56.8 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 36/133 (27%), Positives = 66/133 (49%)
Query: 343 PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPS 402
P + + G+++ A+G H++ + S+ VY+ Q+ P +
Sbjct: 19 PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEE-PIQA 77
Query: 403 LENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN-IPSQV-TIEGCVPR 460
L VH VSCG H+ + G+VF WG GQLG+G+ + + +P+++ ++ G
Sbjct: 78 LSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKII 137
Query: 461 NVACGWWHTLLLA 473
V+CG +H+L L+
Sbjct: 138 QVSCGHYHSLALS 150
Score = 87 (35.7 bits), Expect = 5.4e-14, Sum P(2) = 5.4e-14
Identities = 26/104 (25%), Positives = 49/104 (47%)
Query: 22 GALPQRSPILSPLVVRLPL-TVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYV 80
G L Q+SP S P+ + + D+ G ++A+ ++ TWG+ + GQ +
Sbjct: 58 GQLGQKSP-QSTKRPEEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSE-GQLGI 115
Query: 81 TSGKH-GEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
K +P I++ + G H +A++E G+V++WG
Sbjct: 116 GESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWG 159
Score = 53 (23.7 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 206 ENLSAFPCLVTLNPGVRIATVAAGGRHTLALSD 238
+ +S P + G++I V+ G H+LALS+
Sbjct: 119 KEISFMPTKINSLAGIKIIQVSCGHYHSLALSE 151
Score = 42 (19.8 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 89 PEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
P T ++KAA+G H + + VY+ G
Sbjct: 19 PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCG 53
Score = 39 (18.8 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 220 GVRIATVAAGGRHTLAL 236
G+++ A+G RH+L L
Sbjct: 27 GLKLLKAASGERHSLLL 43
>RGD|1561739 [details] [associations]
symbol:Herc6 "HECT and RLD domain containing E3 ubiquitin
protein ligase family member 6" species:10116 "Rattus norvegicus"
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 RGD:1561739 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
HOGENOM:HOG000208452 HOVERGEN:HBG050878 OrthoDB:EOG4N30N6
IPI:IPI00553869 EMBL:BC085921 UniGene:Rn.107120
ProteinModelPortal:Q5U2P8 PhosphoSite:Q5U2P8 UCSC:RGD:1561739
InParanoid:Q5U2P8 ArrayExpress:Q5U2P8 Genevestigator:Q5U2P8
Uniprot:Q5U2P8
Length = 1034
Score = 188 (71.2 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 50/175 (28%), Positives = 83/175 (47%)
Query: 306 ACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTI 365
A G RHS ++ + + G GQ GQ S P + +L + I+ V+ G H++
Sbjct: 34 ASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQALSTVHIDLVSCGKEHSV 93
Query: 366 CISSDGDVYA-XXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
+ G V+ + +P ++ SL + VSCG H+ +++D
Sbjct: 94 AVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKIN--SLAGIKIIQVSCGHYHSLALSED 151
Query: 425 GKVFCWGWNKYGQLGLGD-VIDRNIPSQV-TIEGCVPRNVACGWWHTLLLAVPPT 477
G+VF WG N+ GQLGLG+ + + P +V ++EG VA G H+ L++ T
Sbjct: 152 GQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGT 206
Score = 186 (70.5 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 51/174 (29%), Positives = 84/174 (48%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDD-ELSPNCVSSLLGIQIEGVAAGLWH 363
++CG HS + G + T+G G GQ G G + + P ++SL GI+I V+ G +H
Sbjct: 85 VSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYH 144
Query: 364 TICISSDGDVYAXXXXXXXXXXXXXDQ-AETLPRLLDAPSLENVHSKSVSCGARHTAVIA 422
++ +S DG V++ + ++ P+ + SLE + V+ G H+ ++
Sbjct: 145 SLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVK--SLEGIPLAQVAAGGTHSFALS 202
Query: 423 DDGKVFCWGWNKYGQLGL-GDVIDRNIPSQVTIEGCVPRNV---ACGWWHTLLL 472
G F WG N+ GQL L G+ I +I NV +CG+ HT +L
Sbjct: 203 LMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVL 256
Score = 176 (67.0 bits), Expect = 6.7e-14, Sum P(2) = 6.7e-14
Identities = 49/169 (28%), Positives = 82/169 (48%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDELSPNCVSSLLGIQIEGVAAGLWH 363
++CG HS +++ G + ++G GQ G G+ + SP V SL GI + VAAG H
Sbjct: 138 VSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTH 197
Query: 364 TICISSDGDVYAXXXXXXXXXXXXXDQA-ETLPRLLDAPSLENVHSKSVSCGARHTAVIA 422
+ +S G + + A E + + +L+ ++ +SCG HT+V+
Sbjct: 198 SFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLT 257
Query: 423 DDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
+DG+VF +G + QL R P + I G V + + CG +HT+
Sbjct: 258 EDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIGGHVSQ-IECGSYHTI 305
Score = 153 (58.9 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 37/133 (27%), Positives = 67/133 (50%)
Query: 343 PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPS 402
P + + G+++ A+G H++ + S+ VY+ Q+ P + A
Sbjct: 19 PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQA-- 76
Query: 403 LENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN-IPSQV-TIEGCVPR 460
L VH VSCG H+ + G+VF WG GQLG+G+ + + +P+++ ++ G
Sbjct: 77 LSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKII 136
Query: 461 NVACGWWHTLLLA 473
V+CG +H+L L+
Sbjct: 137 QVSCGHYHSLALS 149
Score = 85 (35.0 bits), Expect = 6.7e-14, Sum P(2) = 6.7e-14
Identities = 27/105 (25%), Positives = 50/105 (47%)
Query: 22 GALPQRSPILS--PLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSY 79
G L Q+SP + P ++ TV D+ G ++A+ ++ TWG+ + GQ
Sbjct: 58 GQLGQKSPQSTKRPEPIQALSTVHI---DLVSCGKEHSVAVCHQGRVFTWGAGSE-GQLG 113
Query: 80 VTSGKH-GEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
+ K +P I++ + G H +A++E G+V++WG
Sbjct: 114 IGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWG 158
Score = 53 (23.7 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 206 ENLSAFPCLVTLNPGVRIATVAAGGRHTLALSD 238
+ +S P + G++I V+ G H+LALS+
Sbjct: 118 KEISFMPTKINSLAGIKIIQVSCGHYHSLALSE 150
Score = 42 (19.8 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 89 PEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
P T ++KAA+G H + + VY+ G
Sbjct: 19 PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCG 53
Score = 41 (19.5 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 20/82 (24%), Positives = 32/82 (39%)
Query: 220 GVRIATVAAGGRHTLALSDIXXXXXXXXXXXXXXXXXSRIRMVSSPHPIPCIES------ 273
G+++ A+G RH+L L S + P PI + +
Sbjct: 27 GLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSP-QSTKRPEPIQALSTVHIDLV 85
Query: 274 SYGKDRSAALS-RGSVNSEGPG 294
S GK+ S A+ +G V + G G
Sbjct: 86 SCGKEHSVAVCHQGRVFTWGAG 107
>MGI|MGI:1890646 [details] [associations]
symbol:Nek8 "NIMA (never in mitosis gene a)-related
expressed kinase 8" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005929 "cilium" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0042995 "cell projection" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0072372 "primary
cilium" evidence=IDA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 MGI:MGI:1890646 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 GO:GO:0005737 GO:GO:0005856 GO:GO:0046872
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104137 CTD:284086 HOGENOM:HOG000006908
HOVERGEN:HBG098799 OMA:EREVFAW OrthoDB:EOG4PZJ65 EMBL:AF407579
EMBL:AK154358 EMBL:BC070457 IPI:IPI00135930 RefSeq:NP_543125.1
UniGene:Mm.23788 ProteinModelPortal:Q91ZR4 SMR:Q91ZR4 IntAct:Q91ZR4
MINT:MINT-1341145 STRING:Q91ZR4 PhosphoSite:Q91ZR4 PRIDE:Q91ZR4
Ensembl:ENSMUST00000017549 GeneID:140859 KEGG:mmu:140859
InParanoid:Q91ZR4 NextBio:370021 Bgee:Q91ZR4 Genevestigator:Q91ZR4
GermOnline:ENSMUSG00000017405 Uniprot:Q91ZR4
Length = 698
Score = 196 (74.1 bits), Expect = 7.8e-14, Sum P(2) = 7.8e-14
Identities = 47/156 (30%), Positives = 79/156 (50%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
G +K +ACG +A +TD G ++TFG G G G G+ D P V +LLG ++ VA
Sbjct: 396 GVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGNLTDISQPTIVEALLGYEMVQVA 455
Query: 359 AGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLD-APSLENVHSKSVSCGARH 417
G H + +S+DG+++A ++ P+ + AP E ++ V CG
Sbjct: 456 CGASHVLALSTDGELFAWGRGDGGRLGLGTRESHNCPQQVPVAPGQE---AQRVVCGIDS 512
Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDV-IDRN-IPSQ 451
+ ++ G+V G N++ +LGL + +D +P Q
Sbjct: 513 SMILTSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQ 548
Score = 144 (55.7 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 51/180 (28%), Positives = 77/180 (42%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDD---EL-SPNCVSSLL----GIQIEG 356
+A G A +T +G L+ + G G G+ EL P VS L G+ I+
Sbjct: 343 VAAGRTQKAGVTRSGRLILWEAPPLG-AGGGTLLPGAVELPQPQFVSRFLEGQSGVTIKH 401
Query: 357 VAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGAR 416
VA G T C++ G + + P +++A L V+CGA
Sbjct: 402 VACGDLFTACLTDRGIIMTFGSGSNGCLGHGNLTDISQPTIVEA--LLGYEMVQVACGAS 459
Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE-GCVPRNVACGWWHTLLLAVP 475
H ++ DG++F WG G+LGLG N P QV + G + V CG +++L P
Sbjct: 460 HVLALSTDGELFAWGRGDGGRLGLGTRESHNCPQQVPVAPGQEAQRVVCGIDSSMILTSP 519
Score = 127 (49.8 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
Identities = 53/218 (24%), Positives = 84/218 (38%)
Query: 274 SYGKDRSAALSRGSVNSEGPGFRVP---GNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
++G+ L G+ S +VP G + + CG S ++T G +L G +
Sbjct: 472 AWGRGDGGRLGLGTRESHNCPQQVPVAPGQEAQRVVCGIDSSMILTSPGRVLACGSNRFN 531
Query: 331 QCGQG--STDDELSP-NCVSSLLGIQIEGVAA-----------GLWHTICISSDGDVYAX 376
+ G S D+E P V L G A G H+ I++ GD Y
Sbjct: 532 KLGLDHLSLDEEPVPYQQVEEALSFTPLGSAPLDQEPLLCVDLGTAHSAAITASGDCYTF 591
Query: 377 XXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYG 436
+ P + LE + V+CG T + +G+V+ WG G
Sbjct: 592 GSNQHGQLGTSSRRVSRAPCRVQG--LEGIKMVMVACGDAFTVAVGAEGEVYSWGKGTRG 649
Query: 437 QLGLGDVIDRNIPSQVTIEGCVP---RNVACGWWHTLL 471
+LG D D +P V ++ P +V+C +TLL
Sbjct: 650 RLGRRDE-DAGLPRPVQLDETHPYMVTSVSCCHGNTLL 686
Score = 75 (31.5 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
Identities = 23/74 (31%), Positives = 38/74 (51%)
Query: 54 CG--FAMAISDSRKLITWGSTDD--LGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAH 109
CG F ++D ++T+GS + LG +T I E L E +V+ A G +H
Sbjct: 404 CGDLFTACLTDRGIIMTFGSGSNGCLGHGNLTDISQPTIVEAL-LGYE--MVQVACGASH 460
Query: 110 CVAVTEGGEVYTWG 123
+A++ GE++ WG
Sbjct: 461 VLALSTDGELFAWG 474
Score = 58 (25.5 bits), Expect = 7.8e-14, Sum P(2) = 7.8e-14
Identities = 18/56 (32%), Positives = 22/56 (39%)
Query: 86 GEIPEPFPLPT-EASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTG 140
G + P LP +V+ AAG VT G + W E P G G L G
Sbjct: 325 GGLSSPLRLPMLNTEVVQVAAGRTQKAGVTRSGRLILW---EAPPLGAGGGTLLPG 377
Score = 47 (21.6 bits), Expect = 6.6e-07, Sum P(3) = 6.6e-07
Identities = 14/36 (38%), Positives = 17/36 (47%)
Query: 204 GDENLSAF--PCLVTLNPGVRIATVAAGGRHTLALS 237
G NL+ P +V G + VA G H LALS
Sbjct: 430 GHGNLTDISQPTIVEALLGYEMVQVACGASHVLALS 465
Score = 37 (18.1 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 216 TLNPGVRIATVAAGGRHTLA 235
+L PG IA+ + G R T A
Sbjct: 280 SLTPGPPIASGSTGSRATSA 299
>UNIPROTKB|A6NED2 [details] [associations]
symbol:RCCD1 "RCC1 domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH471101 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 EMBL:AC068831
EMBL:BC113826 EMBL:BC140708 EMBL:BC140709 IPI:IPI00399158
RefSeq:NP_001017919.1 RefSeq:NP_291022.2 UniGene:Hs.655895
ProteinModelPortal:A6NED2 SMR:A6NED2 STRING:A6NED2
PhosphoSite:A6NED2 PaxDb:A6NED2 PRIDE:A6NED2
Ensembl:ENST00000394258 Ensembl:ENST00000556618 GeneID:91433
KEGG:hsa:91433 UCSC:uc002bqj.3 CTD:91433 GeneCards:GC15P091498
HGNC:HGNC:30457 HPA:HPA039683 HPA:HPA040776 neXtProt:NX_A6NED2
PharmGKB:PA142671092 eggNOG:NOG305770 HOGENOM:HOG000154085
HOVERGEN:HBG061852 InParanoid:A6NED2 OMA:ERPGAWF OrthoDB:EOG41NTMF
PhylomeDB:A6NED2 GenomeRNAi:91433 NextBio:77244 ArrayExpress:A6NED2
Bgee:A6NED2 CleanEx:HS_RCCD1 Genevestigator:A6NED2 Uniprot:A6NED2
Length = 376
Score = 178 (67.7 bits), Expect = 9.1e-14, Sum P(2) = 9.1e-14
Identities = 57/207 (27%), Positives = 87/207 (42%)
Query: 274 SYGKDRSAALSRGSVNSE-GPGF--RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
S+G R L G++ +E P + G + +A GG HS +++ G + +GW G
Sbjct: 181 SWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESG 240
Query: 331 QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQ 390
Q + + L E VA ++ DG
Sbjct: 241 QLALPTRN-----------LAEDGETVAREATE---LNEDGSQVKRTGGAEDGAPAPFIA 286
Query: 391 AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
+ P LLD P + + SCG+RHTAV+ G+++ WGW KYGQLG D + P
Sbjct: 287 VQPFPALLDLPMGSD--AVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPR 344
Query: 451 QVTI---EGCVPRNVACGWWHTLLLAV 474
+V + + V CG W+T + AV
Sbjct: 345 RVEYFVDKQLQVKAVTCGPWNTYVYAV 371
Score = 168 (64.2 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 34/108 (31%), Positives = 58/108 (53%)
Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFR--VPGNYVKGIACGGRHSAVITDAGALLTFGW 326
P E+ G+ +R V+ P +R P + + G H+ ++ AG + ++G
Sbjct: 125 PAGEAQAGRLPLLPCARAYVSPRAPFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGG 184
Query: 327 GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVY 374
G +GQ G G+ + EL P + +L G+ + VAAG WH++C+S GD+Y
Sbjct: 185 GRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIY 232
Score = 129 (50.5 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 43/167 (25%), Positives = 66/167 (39%)
Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIXXXXXXXXXXXXXXXXXSRIRMVSSPHPIPCI 271
P L+ G+ +A VAAGG H++ +S+ +R + +
Sbjct: 201 PRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTR-NLAEDGETVARE 259
Query: 272 ESSYGKDRSAALSRGSVNSEGPG-----------FRVP-GNYVKGIACGGRHSAVITDAG 319
+ +D S G P +P G+ +CG RH+AV+T G
Sbjct: 260 ATELNEDGSQVKRTGGAEDGAPAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTG 319
Query: 320 ALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG--IQIEGVAAGLWHT 364
L T+GWG YGQ G T P V + +Q++ V G W+T
Sbjct: 320 ELYTWGWGKYGQLGHEDTTSLDRPRRVEYFVDKQLQVKAVTCGPWNT 366
Score = 116 (45.9 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 24/81 (29%), Positives = 41/81 (50%)
Query: 360 GLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
G H + + + G V++ +AE PRLL+A L+ + V+ G H+
Sbjct: 166 GAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEA--LQGLVMAEVAAGGWHSV 223
Query: 420 VIADDGKVFCWGWNKYGQLGL 440
+++ G ++ WGWN+ GQL L
Sbjct: 224 CVSETGDIYIWGWNESGQLAL 244
Score = 109 (43.4 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 22/74 (29%), Positives = 39/74 (52%)
Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVP 459
P + ++ + GA H ++ G+VF WG ++GQLG G + P + ++G V
Sbjct: 153 PLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVM 212
Query: 460 RNVACGWWHTLLLA 473
VA G WH++ ++
Sbjct: 213 AEVAAGGWHSVCVS 226
Score = 67 (28.6 bits), Expect = 9.1e-14, Sum P(2) = 9.1e-14
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 76 GQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEV 119
GQ + SG+ ++ P PL I + +A W++ VT GG +
Sbjct: 18 GQE-LGSGRGRQVHSPSPLRAGVDICRVSASWSYTAFVTRGGRL 60
Score = 51 (23.0 bits), Expect = 4.1e-12, Sum P(2) = 4.1e-12
Identities = 17/53 (32%), Positives = 23/53 (43%)
Query: 91 PF--PLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGT 141
PF PL E + G H + + G+V++WG GR G L GT
Sbjct: 149 PFYRPLAPELRARQLELGAEHALLLDAAGQVFSWG------GGR-HGQLGHGT 194
>UNIPROTKB|I3L5B6 [details] [associations]
symbol:LOC100737658 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 Ensembl:ENSSSCT00000029356 OMA:PEREMAM
Uniprot:I3L5B6
Length = 680
Score = 206 (77.6 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 60/242 (24%), Positives = 106/242 (43%)
Query: 205 DENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIXXXXXXXXXXXXXXXXXSRIRMVSS 264
+++ +A P LV + G R ++ G+ L + +R + +
Sbjct: 286 EKSAAAGPPLVPGSTGSRTSSARCRGKSEGXLPMLNTEVVQVAAGRTQKAGVTRCLPLPA 345
Query: 265 PHPIPCIESSYGKDRSAALSRGSVNSEGPGF--RV----PGNYVKGIACGGRHSAVITDA 318
P P+P G A L G++ P F R G +K +ACG +A +TD
Sbjct: 346 PSPVPSQAPPLGAGGGALLP-GAIEQPQPQFVSRFLEGQSGVTIKHVACGDLFTACLTDR 404
Query: 319 GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXX 378
G ++TFG G G G GS +D P V +LLG ++ VA G H + +S++ +++A
Sbjct: 405 GIIMTFGSGSNGCLGHGSLNDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGR 464
Query: 379 XXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
++ P+L+ P + ++ V CG + ++ G+ G N++ +L
Sbjct: 465 GDGGRLGLGTRESHCCPQLVPMPPGQE--AQRVVCGIDSSMILTVPGQALACGSNRFNKL 522
Query: 439 GL 440
GL
Sbjct: 523 GL 524
Score = 114 (45.2 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 49/189 (25%), Positives = 76/189 (40%)
Query: 298 PGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG--STDDELSPNC-VSSLLGIQI 354
PG + + CG S ++T G L G + + G S +E +P+ V +
Sbjct: 488 PGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPHQQVEEAVTFTP 547
Query: 355 EGVAAGLWHTICISSD-GDVY-AXXXXXXXXXXXXXDQAETLPRL-LDAPSLENVHSKSV 411
G +A L +S D G + A A + R L+ + +V
Sbjct: 548 LG-SAPLDQEPLLSVDLGTAHSAAVTXASGDCYTFGSNARRVSRAPCRVQGLQGIKISTV 606
Query: 412 SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVP---RNVACGWWH 468
+CG T I +G+VF WG G+LG D D +P V ++ P +V+C +
Sbjct: 607 ACGDAFTVAIGAEGEVFSWGKGARGRLGRKDE-DAGLPRPVQLDETHPYTVTSVSCCHGN 665
Query: 469 TLLLAVPPT 477
TLL P T
Sbjct: 666 TLLAVRPVT 674
Score = 68 (29.0 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 30/108 (27%), Positives = 48/108 (44%)
Query: 20 LPGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCG--FAMAISDSRKLITWGSTDD--L 75
LPGA+ Q P V R G + + CG F ++D ++T+GS + L
Sbjct: 364 LPGAIEQPQP---QFVSRF--LEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCL 418
Query: 76 GQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
G + I E L E +V+ A G +H +A++ E++ WG
Sbjct: 419 GHGSLNDISQPTIVEAL-LGYE--MVQVACGASHVLALSTERELFAWG 463
Score = 47 (21.6 bits), Expect = 0.00094, Sum P(3) = 0.00094
Identities = 13/34 (38%), Positives = 16/34 (47%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS 237
G N + P +V G + VA G H LALS
Sbjct: 421 GSLNDISQPTIVEALLGYEMVQVACGASHVLALS 454
Score = 40 (19.1 bits), Expect = 0.00094, Sum P(3) = 0.00094
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 88 IPEPFPLPTEASIVKAAAG 106
+P P P+P++A + A G
Sbjct: 343 LPAPSPVPSQAPPLGAGGG 361
>ZFIN|ZDB-GENE-081015-2 [details] [associations]
symbol:rpgrb "retinitis pigmentosa GTPase regulator
b" species:7955 "Danio rerio" [GO:0060287 "epithelial cilium
movement involved in determination of left/right asymmetry"
evidence=IMP] [GO:0060271 "cilium morphogenesis" evidence=IMP]
[GO:0010842 "retina layer formation" evidence=IMP] [GO:0060041
"retina development in camera-type eye" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] INTERPRO:IPR000408
Pfam:PF00415 ZFIN:ZDB-GENE-081015-2 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0010842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0060271 GO:GO:0060287
GeneTree:ENSGT00700000104160 EMBL:CR450831 IPI:IPI00798788
RefSeq:XP_685964.5 UniGene:Dr.100975 Ensembl:ENSDART00000088624
GeneID:557752 KEGG:dre:557752 CTD:557752 NextBio:20882140
Bgee:F1QM29 Uniprot:F1QM29
Length = 1413
Score = 210 (79.0 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 49/170 (28%), Positives = 86/170 (50%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
I+CG H+A++T+ G L FG +GQ G G+ P CV +L +++ A G HT
Sbjct: 41 ISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALKSERVKLTACGRTHT 100
Query: 365 ICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
+ +S G++YA T L++ + + K ++ G+ +A + D
Sbjct: 101 LVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGP-IKMLAAGSNTSAALTQD 159
Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAV 474
G+++ WG N GQ+GLG + P +V++ G V+CG++H+ + V
Sbjct: 160 GRLYMWGDNSEGQIGLGKESNALTPQEVSV-GKRVFWVSCGYYHSAFVTV 208
Score = 177 (67.4 bits), Expect = 7.6e-10, Sum P(2) = 7.6e-10
Identities = 59/189 (31%), Positives = 91/189 (48%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGI--QIEG 356
G V ++CG HSA +T GAL TFG G+ G ST+ + + I ++
Sbjct: 190 GKRVFWVSCGYYHSAFVTVDGALYTFGEKDSGKLGL-STEKLANHKVPQQVTDIPDRVVQ 248
Query: 357 VAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAET-LPRLLDAPSLENVHSKSVSCGA 415
VA G HT+ ++ + +VY+ E+ LPR+++ K +CG
Sbjct: 249 VACGGGHTVALT-ENEVYSFGLGQFGQLGHGTFIFESRLPRVVE--HFRKGRVKHAACGE 305
Query: 416 RHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPR-------NVACGWWH 468
HTA+I D+G ++ +G ++G+LGLG+ N +Q C PR +V CG H
Sbjct: 306 NHTALITDNGLLYTFGDGRHGKLGLGE---ENFTNQFKPTLC-PRFLDYHVHSVTCGGCH 361
Query: 469 TLLLAVPPT 477
L+LA P T
Sbjct: 362 MLVLAKPRT 370
Score = 161 (61.7 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
Identities = 51/177 (28%), Positives = 87/177 (49%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
+K +A G SA +T G L +G GQ G G + L+P VS +G ++ V+ G
Sbjct: 143 IKMLAAGSNTSAALTQDGRLYMWGDNSEGQIGLGKESNALTPQEVS--VGKRVFWVSCGY 200
Query: 362 WHTICISSDGDVYAXXXXXXXXXXXXXDQAET--LPR-LLDAPSLENVHSKSVSCGARHT 418
+H+ ++ DG +Y ++ +P+ + D P + V V+CG HT
Sbjct: 201 YHSAFVTVDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIP--DRV--VQVACGGGHT 256
Query: 419 AVIADDGKVFCWGWNKYGQLGLGDVI-DRNIPSQVTI--EGCVPRNVACGWWHTLLL 472
+ ++ +V+ +G ++GQLG G I + +P V +G V ++ ACG HT L+
Sbjct: 257 VALTEN-EVYSFGLGQFGQLGHGTFIFESRLPRVVEHFRKGRV-KHAACGENHTALI 311
Score = 147 (56.8 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 54/176 (30%), Positives = 78/176 (44%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ--IEGVAA 359
VK ACG H+ V T G L G GQ G G +D S + V Q I+ +AA
Sbjct: 90 VKLTACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVE-FFNKQGPIKMLAA 148
Query: 360 GLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
G + ++ DG +Y + P+ + + V VSCG H+A
Sbjct: 149 GSNTSAALTQDGRLYMWGDNSEGQIGLGKESNALTPQEVSVG--KRVFW--VSCGYYHSA 204
Query: 420 VIADDGKVFCWGWNKYGQLGLGD--VIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
+ DG ++ +G G+LGL + + +P QVT I V + VACG HT+ L
Sbjct: 205 FVTVDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPDRVVQ-VACGGGHTVAL 259
Score = 128 (50.1 bits), Expect = 0.00018, P = 0.00018
Identities = 31/77 (40%), Positives = 46/77 (59%)
Query: 399 DAPS---LENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TI 454
+APS L+N +SCG HTA++ ++GK+F +G N +GQLGLG N P+ V +
Sbjct: 26 NAPSKFWLKNDVPLRISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKAL 85
Query: 455 EGCVPRNVACGWWHTLL 471
+ + ACG HTL+
Sbjct: 86 KSERVKLTACGRTHTLV 102
Score = 111 (44.1 bits), Expect = 5.0e-06, Sum P(3) = 5.0e-06
Identities = 31/101 (30%), Positives = 47/101 (46%)
Query: 274 SYGKDRSAALSRGSVNSEGPGFRVPGNYVKG----IACGGRHSAVITDAGALLTFGWGLY 329
S+G + L G+ E RV ++ KG ACG H+A+ITD G L TFG G +
Sbjct: 266 SFGLGQFGQLGHGTFIFESRLPRVVEHFRKGRVKHAACGENHTALITDNGLLYTFGDGRH 325
Query: 330 GQCGQGSTD--DELSPNCVSSLLGIQIEGVAAGLWHTICIS 368
G+ G G + ++ P L + V G H + ++
Sbjct: 326 GKLGLGEENFTNQFKPTLCPRFLDYHVHSVTCGGCHMLVLA 366
Score = 76 (31.8 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 41/136 (30%), Positives = 62/136 (45%)
Query: 14 VFMWG-YLPG--ALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGF--AMAISDSRKLIT 68
++MWG G L + S L+P V +VG + V CG+ + ++ L T
Sbjct: 162 LYMWGDNSEGQIGLGKESNALTPQEV----SVG---KRVFWVSCGYYHSAFVTVDGALYT 214
Query: 69 WGSTDD--LGQSYVTSGKHGEIPEPFP-LPTEASIVKAAAGWAHCVAVTEGGEVYTWGWK 125
+G D LG S H ++P+ +P +V+ A G H VA+TE EVY++G
Sbjct: 215 FGEKDSGKLGLSTEKLANH-KVPQQVTDIPDR--VVQVACGGGHTVALTEN-EVYSFGLG 270
Query: 126 ECVPSGRVFGDLSTGT 141
+ FG L GT
Sbjct: 271 Q-------FGQLGHGT 279
Score = 73 (30.8 bits), Expect = 5.0e-06, Sum P(3) = 5.0e-06
Identities = 24/87 (27%), Positives = 39/87 (44%)
Query: 53 GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
G + A++ +L WG + GQ + GK P + + + G+ H
Sbjct: 149 GSNTSAALTQDGRLYMWGDNSE-GQ--IGLGKESNALTPQEVSVGKRVFWVSCGYYHSAF 205
Query: 113 VTEGGEVYTWGWKECVPSGRVFGDLST 139
VT G +YT+G K+ SG++ LST
Sbjct: 206 VTVDGALYTFGEKD---SGKL--GLST 227
Score = 51 (23.0 bits), Expect = 5.0e-06, Sum P(3) = 5.0e-06
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSD 238
P VT P R+ VA GG HT+AL++
Sbjct: 236 PQQVTDIPD-RVVQVACGGGHTVALTE 261
Score = 48 (22.0 bits), Expect = 7.6e-10, Sum P(2) = 7.6e-10
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 97 EASIVKAAAGWAHCVAVTEGGEVYTWG 123
+ I AAG A+T+ G +Y WG
Sbjct: 140 QGPIKMLAAGSNTSAALTQDGRLYMWG 166
Score = 46 (21.3 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 17/60 (28%), Positives = 28/60 (46%)
Query: 70 GSTDD-LGQS--YVTSGKH---GEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
G T+D + +S T GK P F L + + + + G H VTE G+++ +G
Sbjct: 3 GETEDEIPESGAVFTFGKSKFADNAPSKFWLKNDVPL-RISCGDEHTALVTENGKLFMFG 61
>TAIR|locus:2159295 [details] [associations]
symbol:RUG3 "RCC1/UVR8/GEF-like 3" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008536 "Ran GTPase binding" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0008380 "RNA splicing"
evidence=IMP] [GO:0032981 "mitochondrial respiratory chain complex
I assembly" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 EMBL:CP002688 GO:GO:0008380 EMBL:AB015472
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0032981
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.29139
UniGene:At.50545 HSSP:P18754 IPI:IPI00532631 RefSeq:NP_200895.2
ProteinModelPortal:Q9FJG9 SMR:Q9FJG9 PRIDE:Q9FJG9
EnsemblPlants:AT5G60870.1 GeneID:836208 KEGG:ath:AT5G60870
TAIR:At5g60870 HOGENOM:HOG000030010 InParanoid:Q9FJG9 OMA:ISCGLFH
PhylomeDB:Q9FJG9 ProtClustDB:CLSN2681113 Genevestigator:Q9FJG9
Uniprot:Q9FJG9
Length = 445
Score = 177 (67.4 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 59/206 (28%), Positives = 86/206 (41%)
Query: 275 YGKDRSAALSRGSVNSEG-PGFR--VPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
+GK L G NS P + ++ IA GG HS +T G + T+G+G +G
Sbjct: 124 WGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHSVALTHQGDVFTWGYGGFGA 183
Query: 332 CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXD-Q 390
G EL P V +I +A HT I+ G++Y +
Sbjct: 184 LGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGELYMWGREEGDGRLGLGPGR 243
Query: 391 AETLPRLLDAPSLEN---VHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
L PS V SVSCG T + +G+++ WG N +LG GD +
Sbjct: 244 GPNEGGGLSVPSKVKALTVPVASVSCGGFFTMALTKEGQLWNWGANSNYELGRGDNLGGW 303
Query: 448 IPSQV-TIEGCVPRNVACGWWHTLLL 472
P V ++EG +ACG +H+L L
Sbjct: 304 EPMPVPSLEGVRITQIACGGYHSLAL 329
Score = 167 (63.8 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 59/216 (27%), Positives = 97/216 (44%)
Query: 266 HPIPCIESSYGKDRSAALSR--GSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLT 323
+P P + D+S +L++ G ++++ FR+ GI+CG HS + D G L
Sbjct: 71 YPSPVANLLFRSDQSFSLAQTPGRIDADSSSFRI------GISCGLFHSGLTID-GDLWI 123
Query: 324 FGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXX 383
+G G G+ G G + PN I +A G H++ ++ GDV+
Sbjct: 124 WGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHSVALTHQGDVFTWGYGGFGA 183
Query: 384 XXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKY-GQLGLGD 442
E +PR +D S + S + G HTA I + G+++ WG + G+LGLG
Sbjct: 184 LGHKVYTRELVPRRVD-DSWDCKISAIATSGT-HTAAITESGELYMWGREEGDGRLGLGP 241
Query: 443 VIDRN------IPSQVTIEGCVPRNVACGWWHTLLL 472
N +PS+V +V+CG + T+ L
Sbjct: 242 GRGPNEGGGLSVPSKVKALTVPVASVSCGGFFTMAL 277
Score = 160 (61.4 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 43/159 (27%), Positives = 77/159 (48%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGW----GLYGQCGQGSTDDE---LS-PNCVSSLLGIQ 353
+ IA G H+A IT++G L +G G G G G +E LS P+ V +L +
Sbjct: 206 ISAIATSGTHTAAITESGELYMWGREEGDGRLG-LGPGRGPNEGGGLSVPSKVKALT-VP 263
Query: 354 IEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSC 413
+ V+ G + T+ ++ +G ++ + P + PSLE V ++C
Sbjct: 264 VASVSCGGFFTMALTKEGQLWNWGANSNYELGRGDNLGGWEP--MPVPSLEGVRITQIAC 321
Query: 414 GARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
G H+ + ++GKV WG +GQLG + ++ +P+++
Sbjct: 322 GGYHSLALTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEI 360
Score = 145 (56.1 bits), Expect = 5.5e-12, Sum P(3) = 5.5e-12
Identities = 52/209 (24%), Positives = 89/209 (42%)
Query: 278 DRSAALSRGSVNSEGPGFRVPGNY------VKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
D L G +EG G VP V ++CGG + +T G L +G +
Sbjct: 234 DGRLGLGPGRGPNEGGGLSVPSKVKALTVPVASVSCGGFFTMALTKEGQLWNWGANSNYE 293
Query: 332 CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQA 391
G+G P V SL G++I +A G +H++ ++ +G V + +
Sbjct: 294 LGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSLRN 353
Query: 392 ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVID-RNIPS 450
+ +P ++A L + ++ G +A I D G+++ WG K QLG+ + + + P
Sbjct: 354 QKVPTEIEA--LADKKIVFIASGGSSSAAITDGGELWMWGNAKDFQLGVPGLPEIQTTPV 411
Query: 451 QVTI----EGCVPRNV---ACGWWHTLLL 472
+V + C P V + G H L L
Sbjct: 412 EVNFLTEEDECQPHKVISISIGASHALCL 440
Score = 114 (45.2 bits), Expect = 1.9e-08, Sum P(3) = 1.9e-08
Identities = 30/104 (28%), Positives = 53/104 (50%)
Query: 274 SYGKDRSAALSRGSVNSEGPGFRVP---GNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
++G + + L RG VP G + IACGG HS +T+ G +L++G G +G
Sbjct: 285 NWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSWGHGGHG 344
Query: 331 QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVY 374
Q G S ++ P + +L +I +A+G + I+ G+++
Sbjct: 345 QLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAITDGGELW 388
Score = 87 (35.7 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 26/75 (34%), Positives = 34/75 (45%)
Query: 51 GGGCG-FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAH 109
G CG F ++ L WG D G+ +P PL E SI A G H
Sbjct: 105 GISCGLFHSGLTIDGDLWIWGKGDG-GRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLH 163
Query: 110 CVAVTEGGEVYTWGW 124
VA+T G+V+TWG+
Sbjct: 164 SVALTHQGDVFTWGY 178
Score = 78 (32.5 bits), Expect = 9.1e-11, Sum P(2) = 9.1e-11
Identities = 36/132 (27%), Positives = 52/132 (39%)
Query: 14 VFMWGYLPGALPQRSPILSPLVVRL-PLTVGSAWRDVCGGGCGFAMAISDSRKLITWG-- 70
+++WG G S V L PL + R + GG ++A++ + TWG
Sbjct: 121 LWIWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGL-HSVALTHQGDVFTWGYG 179
Query: 71 STDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPS 130
LG T +P + I A H A+TE GE+Y WG +E
Sbjct: 180 GFGALGHKVYTREL---VPRRVDDSWDCKISAIATSGTHTAAITESGELYMWGREE--GD 234
Query: 131 GRVFGDLSTGTG 142
GR+ L G G
Sbjct: 235 GRL--GLGPGRG 244
Score = 70 (29.7 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 33/133 (24%), Positives = 57/133 (42%)
Query: 14 VFMWGYLP-GALPQRSPILSPLVVRLPLTVGSAW----RDVCGGGCGFAMAISDSRKLIT 68
VF WGY GAL + + + +V P V +W + G A AI++S +L
Sbjct: 173 VFTWGYGGFGALGHK--VYTRELV--PRRVDDSWDCKISAIATSGTHTA-AITESGELYM 227
Query: 69 WGSTDDLGQSYVTSGKHGEIPEPFPLPTEAS-----IVKAAAGWAHCVAVTEGGEVYTWG 123
WG + G+ + G+ +P++ + + G +A+T+ G+++ WG
Sbjct: 228 WGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVPVASVSCGGFFTMALTKEGQLWNWG 287
Query: 124 WKECVPSGRVFGD 136
GR GD
Sbjct: 288 ANSNYELGR--GD 298
Score = 45 (20.9 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS 237
G EN P L L I +A GG H++AL+
Sbjct: 135 GQENSVFVPNLNPLFEEHSIRCIALGGLHSVALT 168
Score = 40 (19.1 bits), Expect = 5.5e-12, Sum P(3) = 5.5e-12
Identities = 6/17 (35%), Positives = 12/17 (70%)
Query: 222 RIATVAAGGRHTLALSD 238
+I+ +A G HT A+++
Sbjct: 205 KISAIATSGTHTAAITE 221
Score = 39 (18.8 bits), Expect = 2.4e-08, Sum P(3) = 2.4e-08
Identities = 8/17 (47%), Positives = 13/17 (76%)
Query: 221 VRIATVAAGGRHTLALS 237
V +A+V+ GG T+AL+
Sbjct: 262 VPVASVSCGGFFTMALT 278
>ZFIN|ZDB-GENE-030131-7951 [details] [associations]
symbol:rcbtb1 "regulator of chromosome
condensation (RCC1) and BTB (POZ) domain containing protein 1"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651
PROSITE:PS50097 SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-030131-7951 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
CTD:55213 HOVERGEN:HBG053261 KO:K11494 HSSP:O87916 EMBL:BC045877
IPI:IPI00503126 RefSeq:NP_956285.1 UniGene:Dr.5968
ProteinModelPortal:Q7ZVG0 GeneID:336007 KEGG:dre:336007
InParanoid:Q7ZVG0 NextBio:20811137 ArrayExpress:Q7ZVG0
Uniprot:Q7ZVG0
Length = 531
Score = 202 (76.2 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 59/218 (27%), Positives = 100/218 (45%)
Query: 263 SSPHPIPCIES----SYGKDRSAALSRGSVNSE-GP---GFRVPGNYVKGIACGGRHSAV 314
S PH + E ++G + + L G+ N P + G V ++CG HS
Sbjct: 83 SGPHVLLVTEDGELYAWGHNGYSQLGNGTTNQGVSPILVSTNLQGKRVTEVSCGSHHSLA 142
Query: 315 ITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ-IEGVAAGLWHTICISSDGDV 373
+T G + +G+ GQ G GST ++ +P VS+ L + I +A G ++ ++ +G+V
Sbjct: 143 LTHEGEVFAWGYNNCGQVGSGSTANQPTPRKVSNCLQNKVIVNIACGQTSSMAVTDNGEV 202
Query: 374 YAXXXXXXXXXXXXXDQAETLP-RLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGW 432
Y + + P RL+ +L+ ++ G H+ + D+G ++ WG
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTPCRLI---ALQGFCVLQIASGYAHSLALTDEGLLYAWGA 259
Query: 433 NKYGQLGLGDVIDRNIPSQVTIEG-CVPRNVACGWWHT 469
N YGQLG G+ ++ P QV E + AC HT
Sbjct: 260 NTYGQLGTGNKSNQLSPVQVMTEKERIVEIAACHSTHT 297
Score = 164 (62.8 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 39/154 (25%), Positives = 71/154 (46%)
Query: 315 ITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW-HTICISSDGDV 373
IT + G G G + ++P + L G ++ ++ G H + ++ DG++
Sbjct: 37 ITHDDEVYVLGLNCSNCLGTGDSQSTIAPKKLDCLSGKKLISLSYGSGPHVLLVTEDGEL 96
Query: 374 YAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWN 433
YA P +L + +L+ VSCG+ H+ + +G+VF WG+N
Sbjct: 97 YAWGHNGYSQLGNGTTNQGVSP-ILVSTNLQGKRVTEVSCGSHHSLALTHEGEVFAWGYN 155
Query: 434 KYGQLGLGDVIDRNIPSQVT--IEGCVPRNVACG 465
GQ+G G ++ P +V+ ++ V N+ACG
Sbjct: 156 NCGQVGSGSTANQPTPRKVSNCLQNKVIVNIACG 189
Score = 129 (50.5 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 35/133 (26%), Positives = 64/133 (48%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYG--QCGQGSTDDELSPNCVSSLLGIQIEGVAA 359
+ IACG S +TD G + +GWG G Q G G+ ++L+P + +L G + +A+
Sbjct: 183 IVNIACGQTSSMAVTDNGEV--YGWGYNGNGQLGLGNNGNQLTPCRLIALQGFCVLQIAS 240
Query: 360 GLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHT- 418
G H++ ++ +G +YA +++ L + E + + +C + HT
Sbjct: 241 GYAHSLALTDEGLLYAWGANTYGQLGTG-NKSNQLSPVQVMTEKERI-VEIAACHSTHTS 298
Query: 419 AVIADDGKVFCWG 431
A G+V+ WG
Sbjct: 299 AAKTQSGQVYMWG 311
Score = 126 (49.4 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 40/134 (29%), Positives = 60/134 (44%)
Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDA 400
LS +SS+ I G +A I I+ D +VY Q+ P+ LD
Sbjct: 13 LSAQELSSIRQACIFGASAN--EAIYITHDDEVYVLGLNCSNCLGTGDSQSTIAPKKLDC 70
Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT--IEGCV 458
S + + S S G H ++ +DG+++ WG N Y QLG G P V+ ++G
Sbjct: 71 LSGKKLISLSYGSGP-HVLLVTEDGELYAWGHNGYSQLGNGTTNQGVSPILVSTNLQGKR 129
Query: 459 PRNVACGWWHTLLL 472
V+CG H+L L
Sbjct: 130 VTEVSCGSHHSLAL 143
Score = 84 (34.6 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 23/85 (27%), Positives = 39/85 (45%)
Query: 53 GCG-FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEAS---IVKAAAGWA 108
G G + +++ +L WG G S + +G + P + T + + + G
Sbjct: 82 GSGPHVLLVTEDGELYAWGHN---GYSQLGNGTTNQGVSPILVSTNLQGKRVTEVSCGSH 138
Query: 109 HCVAVTEGGEVYTWGWKEC--VPSG 131
H +A+T GEV+ WG+ C V SG
Sbjct: 139 HSLALTHEGEVFAWGYNNCGQVGSG 163
Score = 61 (26.5 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 203 SGDENLSAFPCLVTLN-PGVRIATVAAGGRHTLALS 237
+G N P LV+ N G R+ V+ G H+LAL+
Sbjct: 109 NGTTNQGVSPILVSTNLQGKRVTEVSCGSHHSLALT 144
>TAIR|locus:2076532 [details] [associations]
symbol:AT3G02300 "AT3G02300" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0008536
"Ran GTPase binding" evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415
EMBL:CP002686 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 IPI:IPI00534317
RefSeq:NP_186879.2 UniGene:At.41157 ProteinModelPortal:F4J609
SMR:F4J609 EnsemblPlants:AT3G02300.1 GeneID:821167
KEGG:ath:AT3G02300 OMA:LKELCEF Uniprot:F4J609
Length = 471
Score = 182 (69.1 bits), Expect = 3.8e-13, Sum P(2) = 3.8e-13
Identities = 58/195 (29%), Positives = 94/195 (48%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL-SP---NCVSSLLG-----I 352
++ ++CG H +++ G L +G+ GQ G+G T + L +P N + L +
Sbjct: 168 IRQVSCGTAHVVALSEEGLLQAWGYNEQGQLGRGVTCEGLQAPRVINAYAKFLDEAPELV 227
Query: 353 QIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQA---ETLPRLLDAPSLENVHSK 409
+I ++ G +HT +S G+VY Q+ E +PR + L+ V K
Sbjct: 228 KIMQLSCGEYHTAALSDAGEVYTWGLGSMGQLGHVSLQSGDKELIPRRV--VGLDGVSMK 285
Query: 410 SVSCGARHTAVIADDGKVFCWGWNKYGQLGLG-------------DVIDRNIPSQVTIEG 456
V+CG HT ++ +G ++ WG + GQLGLG +++ RN+P V I
Sbjct: 286 EVACGGVHTCALSLEGALYAWGGGQAGQLGLGPQSGFFFSVSNGSEMLLRNVPVLV-IPT 344
Query: 457 CVPRNVACGWWHTLL 471
V R VACG HTL+
Sbjct: 345 DV-RLVACGHSHTLV 358
Score = 174 (66.3 bits), Expect = 8.3e-13, Sum P(3) = 8.3e-13
Identities = 58/183 (31%), Positives = 84/183 (45%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGST---DDELSPNCVSSLLGIQIEGVAAGL 361
++CG H+A ++DAG + T+G G GQ G S D EL P V L G+ ++ VA G
Sbjct: 232 LSCGEYHTAALSDAGEVYTWGLGSMGQLGHVSLQSGDKELIPRRVVGLDGVSMKEVACGG 291
Query: 362 WHTICISSDGDVYAXXXXXXXXXX---------XXXDQAETLPRLLDAPSLE-NVHSKSV 411
HT +S +G +YA + +E L R + P L + V
Sbjct: 292 VHTCALSLEGALYAWGGGQAGQLGLGPQSGFFFSVSNGSEMLLR--NVPVLVIPTDVRLV 349
Query: 412 SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVP--RNVACGWWHT 469
+CG HT V +G++ WG+N YGQ PS V + CV R +A G H+
Sbjct: 350 ACGHSHTLVYMREGRICGWGYNSYGQAANEKSSYAWYPSPV--DWCVGQVRKLAAGGGHS 407
Query: 470 LLL 472
+L
Sbjct: 408 AVL 410
Score = 169 (64.5 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 39/137 (28%), Positives = 60/137 (43%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
I+CG H+A + G+L +G YGQ G G+ P V L ++ V+ G + T
Sbjct: 66 ISCGREHTAAVASDGSLFAWGANEYGQLGDGTEVGRKHPKKVKQLQSEFVKFVSCGAFCT 125
Query: 365 ICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
I+ + +Q LPRL + VSCG H ++++
Sbjct: 126 AAIAEPRE-NDGTLSTSRLWVWGQNQGSNLPRLFSGAFPATTAIRQVSCGTAHVVALSEE 184
Query: 425 GKVFCWGWNKYGQLGLG 441
G + WG+N+ GQLG G
Sbjct: 185 GLLQAWGYNEQGQLGRG 201
Score = 155 (59.6 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 32/82 (39%), Positives = 45/82 (54%)
Query: 395 PRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT- 453
P L P+ N +SCG HTA +A DG +F WG N+YGQLG G + R P +V
Sbjct: 50 PELFGCPAGANSRWLDISCGREHTAAVASDGSLFAWGANEYGQLGDGTEVGRKHPKKVKQ 109
Query: 454 IEGCVPRNVACGWWHTLLLAVP 475
++ + V+CG + T +A P
Sbjct: 110 LQSEFVKFVSCGAFCTAAIAEP 131
Score = 150 (57.9 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 54/194 (27%), Positives = 88/194 (45%)
Query: 296 RVPGNYVKGIACGGRHSAVITDA----GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
++ +VK ++CG +A I + G L T ++GQ QGS L +
Sbjct: 109 QLQSEFVKFVSCGAFCTAAIAEPRENDGTLSTSRLWVWGQ-NQGSNLPRLFSGAFPATTA 167
Query: 352 IQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXD-QAETLPRLLDA------PSLE 404
I+ V+ G H + +S +G + A + PR+++A + E
Sbjct: 168 IR--QVSCGTAHVVALSEEGLLQAWGYNEQGQLGRGVTCEGLQAPRVINAYAKFLDEAPE 225
Query: 405 NVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVI--DRN-IPSQVT-IEGCVPR 460
V +SCG HTA ++D G+V+ WG GQLG + D+ IP +V ++G +
Sbjct: 226 LVKIMQLSCGEYHTAALSDAGEVYTWGLGSMGQLGHVSLQSGDKELIPRRVVGLDGVSMK 285
Query: 461 NVACGWWHTLLLAV 474
VACG HT L++
Sbjct: 286 EVACGGVHTCALSL 299
Score = 95 (38.5 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 52/191 (27%), Positives = 70/191 (36%)
Query: 50 CGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGE-IPEPFP--LPTEASIVKAAAG 106
CG C AI++ R+ ST L +V G +P F P +I + + G
Sbjct: 120 CGAFC--TAAIAEPRENDGTLSTSRL---WVWGQNQGSNLPRLFSGAFPATTAIRQVSCG 174
Query: 107 WAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEXXXXXXXXX 166
AH VA++E G + WG+ E GR G G + V + FL E
Sbjct: 175 TAHVVALSEEGLLQAWGYNEQGQLGR--GVTCEGLQAPR-VINAYAKFLDEAPELVKIMQ 231
Query: 167 XXXXXXXXXXXXXXXXXXXXXXXXISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATV 226
S+ + S SGD+ L P V GV + V
Sbjct: 232 LSCGEYHTAALSDAGEVYTWGLG--SMGQLGHVSLQSGDKEL--IPRRVVGLDGVSMKEV 287
Query: 227 AAGGRHTLALS 237
A GG HT ALS
Sbjct: 288 ACGGVHTCALS 298
Score = 80 (33.2 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 34/135 (25%), Positives = 53/135 (39%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG---------STDDE-LSPNCVSS 348
G +K +ACGG H+ ++ GAL +G G GQ G G S E L N
Sbjct: 281 GVSMKEVACGGVHTCALSLEGALYAWGGGQAGQLGLGPQSGFFFSVSNGSEMLLRNVPVL 340
Query: 349 LLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHS 408
++ + VA G HT+ +G + P +D + V
Sbjct: 341 VIPTDVRLVACGHSHTLVYMREGRICGWGYNSYGQAANEKSSYAWYPSPVDW-CVGQV-- 397
Query: 409 KSVSCGARHTAVIAD 423
+ ++ G H+AV+ D
Sbjct: 398 RKLAAGGGHSAVLTD 412
Score = 61 (26.5 bits), Expect = 3.8e-13, Sum P(2) = 3.8e-13
Identities = 20/69 (28%), Positives = 29/69 (42%)
Query: 89 PEPFPLPTEASI--VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKD 146
PE F P A+ + + G H AV G ++ WG E G++ G K
Sbjct: 50 PELFGCPAGANSRWLDISCGREHTAAVASDGSLFAWGANEY---GQLGDGTEVGRKHPKK 106
Query: 147 VFERQSSFL 155
V + QS F+
Sbjct: 107 VKQLQSEFV 115
Score = 42 (19.8 bits), Expect = 8.3e-13, Sum P(3) = 8.3e-13
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 221 VRIATVAAGGRHTLALSD 238
V+I ++ G HT ALSD
Sbjct: 227 VKIMQLSCGEYHTAALSD 244
Score = 42 (19.8 bits), Expect = 7.0e-11, Sum P(3) = 7.0e-11
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 108 AHCVAVTEGGEVYTWGWKECVPSGR 132
A V++ +Y WG+ + +GR
Sbjct: 11 APSVSIPTKSAIYVWGYNQSGQTGR 35
>MGI|MGI:1914388 [details] [associations]
symbol:Herc6 "hect domain and RLD 6" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IBA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=ISO;IBA] [GO:0006464 "cellular protein modification
process" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0030332 "cyclin binding" evidence=ISO] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] [GO:0045087 "innate immune response"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 MGI:MGI:1914388 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005634 GO:GO:0005737 GO:GO:0045087
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0042787 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
CTD:55008 OMA:HIFAGTY EMBL:AC127307 EMBL:AC142212 EMBL:AK017888
EMBL:AK149648 IPI:IPI00850197 RefSeq:NP_080268.1 UniGene:Mm.297393
ProteinModelPortal:F2Z461 SMR:F2Z461 PRIDE:F2Z461
Ensembl:ENSMUST00000031817 GeneID:67138 KEGG:mmu:67138
ChiTaRS:HERC6 NextBio:323692 Bgee:F2Z461 Uniprot:F2Z461
Length = 1003
Score = 187 (70.9 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 48/178 (26%), Positives = 87/178 (48%)
Query: 301 YVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDD-ELSPNCVSSLLGIQIEGVAA 359
+V ++CG HS + G + +G G GQ G G + P + +L GI+I V+
Sbjct: 75 HVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSC 134
Query: 360 GLWHTICISSDGDVYAXXXXXXXXXXXXXD-QAETLPRLLDAPSLENVHSKSVSCGARHT 418
G +H++ +S DG V++ + +++ +P+ + SLE + V+ G H+
Sbjct: 135 GHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVK--SLEGIPLAQVAAGGTHS 192
Query: 419 AVIADDGKVFCWGWNKYGQLGL-GDVIDRNI--PSQV-TIEGCVPRNVACGWWHTLLL 472
++ G F WG N+ GQL L G+ + I P + ++ ++CG+ HT +L
Sbjct: 193 FALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVL 250
Score = 177 (67.4 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 49/175 (28%), Positives = 80/175 (45%)
Query: 306 ACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTI 365
A G HS ++ + + G +GQ GQ P + +L + ++ V+ G H++
Sbjct: 28 ASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSV 87
Query: 366 CISSDGDVYA-XXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
+ G V+A + +P + A L + VSCG H+ +++D
Sbjct: 88 AVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKA--LAGIKIIQVSCGHYHSLALSED 145
Query: 425 GKVFCWGWNKYGQLGLG-DVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLAVPPT 477
G VF WG N GQLGLG + + IP +V ++EG VA G H+ L++ T
Sbjct: 146 GHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGT 200
Score = 175 (66.7 bits), Expect = 4.3e-13, Sum P(2) = 4.3e-13
Identities = 48/169 (28%), Positives = 80/169 (47%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD-DELSPNCVSSLLGIQIEGVAAGLWH 363
++CG HS +++ G + ++G GQ G G + P V SL GI + VAAG H
Sbjct: 132 VSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTH 191
Query: 364 TICISSDGDVYAXXXXXXXXXXXXXDQA-ETLPRLLDAPSLENVHSKSVSCGARHTAVIA 422
+ +S G + ++ E + + +L+N+ +SCG HTAV+
Sbjct: 192 SFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLT 251
Query: 423 DDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
++G+VF +G N GQL + P + I G V + + C +HT+
Sbjct: 252 EEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGGRVSQ-IECASYHTI 299
Score = 162 (62.1 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 38/125 (30%), Positives = 65/125 (52%)
Query: 351 GIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKS 410
GI++ A+G H++ + S+ VY+ DQ+ P + A L ++H
Sbjct: 21 GIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQA--LNDLHVDL 78
Query: 411 VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN-IPSQV-TIEGCVPRNVACGWWH 468
VSCG H+ + GKVF WG GQLG+G+ + + +P+++ + G V+CG +H
Sbjct: 79 VSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYH 138
Query: 469 TLLLA 473
+L L+
Sbjct: 139 SLALS 143
Score = 78 (32.5 bits), Expect = 4.3e-13, Sum P(2) = 4.3e-13
Identities = 19/73 (26%), Positives = 35/73 (47%)
Query: 54 CG--FAMAISDSRKLITWGSTDDLGQSYVTSGKH-GEIPEPFPLPTEASIVKAAAGWAHC 110
CG ++A+ K+ WG+ + GQ + K +P I++ + G H
Sbjct: 81 CGKEHSVAVCHKGKVFAWGAGSE-GQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYHS 139
Query: 111 VAVTEGGEVYTWG 123
+A++E G V++WG
Sbjct: 140 LALSEDGHVFSWG 152
Score = 66 (28.3 bits), Expect = 4.5e-13, Sum P(3) = 4.5e-13
Identities = 19/56 (33%), Positives = 25/56 (44%)
Query: 68 TWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
+WG LGQ S E PEP + + + G H VAV G+V+ WG
Sbjct: 50 SWGQ---LGQRRDQST---ERPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWG 99
Score = 53 (23.7 bits), Expect = 4.5e-13, Sum P(3) = 4.5e-13
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 206 ENLSAFPCLVTLNPGVRIATVAAGGRHTLALSD 238
+ +S P + G++I V+ G H+LALS+
Sbjct: 112 KEISFMPTKIKALAGIKIIQVSCGHYHSLALSE 144
Score = 38 (18.4 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
Identities = 19/82 (23%), Positives = 29/82 (35%)
Query: 220 GVRIATVAAGGRHTLALSDIXXXXXXXXXXXXXXXXXSRIRMVSSPHPIPCIES------ 273
G+ + A+G H+L L R + P PI +
Sbjct: 21 GIELLQAASGEHHSLLLFS-NHRVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLV 79
Query: 274 SYGKDRSAALS-RGSVNSEGPG 294
S GK+ S A+ +G V + G G
Sbjct: 80 SCGKEHSVAVCHKGKVFAWGAG 101
>ZFIN|ZDB-GENE-090311-56 [details] [associations]
symbol:si:ch73-190m4.1 "si:ch73-190m4.1"
species:7955 "Danio rerio" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0006464 "cellular protein modification process" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-090311-56
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00700000104312
EMBL:CR788312 EMBL:CU467858 IPI:IPI00933554 RefSeq:XP_688463.5
UniGene:Dr.113692 UniGene:Dr.113776 Ensembl:ENSDART00000111114
GeneID:559981 KEGG:dre:559981 NextBio:20883233 Uniprot:F1RDE7
Length = 992
Score = 202 (76.2 bits), Expect = 8.7e-13, P = 8.7e-13
Identities = 55/174 (31%), Positives = 79/174 (45%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCG-QGSTDDELSPNCVSSLLGIQIEGVAAGLWH 363
IACG +HS +T+ G L +G GQ G + SP + SL GI + ++AG H
Sbjct: 123 IACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPRHLQSLCGIPVAQISAGGNH 182
Query: 364 TICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
+ +S G V+ +P +++ SL+ S+SCG HTA +A
Sbjct: 183 SFVLSLSGVVFGWGGNSAGQLGLGDTTDRFVPTVVN--SLKRKKIVSISCGGEHTAALAK 240
Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLAVPP 476
G VF +G +GQLG D + P V + G V CG HTL+ P
Sbjct: 241 GGTVFTFGSGGFGQLGHNSFKDEHHPRLVAELWGSKVSQVTCGRNHTLVSTASP 294
Score = 172 (65.6 bits), Expect = 7.1e-10, Sum P(2) = 7.1e-10
Identities = 48/154 (31%), Positives = 71/154 (46%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWG--LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAA 359
V I+ GG HS V++ +G + FGWG GQ G G T D P V+SL +I ++
Sbjct: 173 VAQISAGGNHSFVLSLSGVV--FGWGGNSAGQLGLGDTTDRFVPTVVNSLKRKKIVSISC 230
Query: 360 GLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
G HT ++ G V+ + E PRL+ L V+CG HT
Sbjct: 231 GGEHTAALAKGGTVFTFGSGGFGQLGHNSFKDEHHPRLV--AELWGSKVSQVTCGRNHTL 288
Query: 420 VIADDGK-VFCWGWNKYGQLGLGDVIDRNIPSQV 452
V K ++ +G GQLG G+ + +++P V
Sbjct: 289 VSTASPKLIYSFGCGMQGQLGNGEQVKQSVPLPV 322
Score = 170 (64.9 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 54/176 (30%), Positives = 84/176 (47%)
Query: 300 NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAA 359
N ++ I CG + ++ D G +L ST E SP + L Q+ +A
Sbjct: 79 NTIRLIVCGEYGAVLLDDGGKVLIM---------DKST--ECSP--LKGLENRQVIQIAC 125
Query: 360 GLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETL-PRLLDAPSLENVHSKSVSCGARHT 418
G H++ +++DG ++ +QA T PR L SL + +S G H+
Sbjct: 126 GDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPRHLQ--SLCGIPVAQISAGGNHS 183
Query: 419 AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLA 473
V++ G VF WG N GQLGLGD DR +P+ V +++ +++CG HT LA
Sbjct: 184 FVLSLSGVVFGWGGNSAGQLGLGDTTDRFVPTVVNSLKRKKIVSISCGGEHTAALA 239
Score = 132 (51.5 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 31/105 (29%), Positives = 49/105 (46%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
+ I+CGG H+A + G + TFG G +GQ G S DE P V+ L G ++ V G
Sbjct: 225 IVSISCGGEHTAALAKGGTVFTFGSGGFGQLGHNSFKDEHHPRLVAELWGSKVSQVTCGR 284
Query: 362 WHT-ICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLEN 405
HT + +S +Y+ +++P +D P+ N
Sbjct: 285 NHTLVSTASPKLIYSFGCGMQGQLGNGEQVKQSVPLPVDQPTEYN 329
Score = 69 (29.3 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 27/104 (25%), Positives = 43/104 (41%)
Query: 47 RDVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHG-EIPEPFPLPTEASIVKA 103
R V CG +MA+++ +L WG + LGQ + + G + P + +
Sbjct: 118 RQVIQIACGDQHSMALTNDGQLFVWGE-NALGQLGLRKEQAGTQSPRHLQSLCGIPVAQI 176
Query: 104 AAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDV 147
+AG H ++ G V+ WG G G L G D+ V
Sbjct: 177 SAGGNHSFVLSLSGVVFGWG-------GNSAGQLGLGDTTDRFV 213
Score = 50 (22.7 bits), Expect = 7.1e-10, Sum P(2) = 7.1e-10
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 220 GVRIATVAAGGRHTLALS 237
G+ +A ++AGG H+ LS
Sbjct: 170 GIPVAQISAGGNHSFVLS 187
>ZFIN|ZDB-GENE-070615-14 [details] [associations]
symbol:zgc:163136 "zgc:163136" species:7955 "Danio
rerio" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0006464
"cellular protein modification process" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 ZFIN:ZDB-GENE-070615-14 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00852092
Ensembl:ENSDART00000113072 OMA:CELECKL Bgee:F1Q5I9 Uniprot:F1Q5I9
Length = 997
Score = 202 (76.2 bits), Expect = 8.8e-13, P = 8.8e-13
Identities = 53/169 (31%), Positives = 78/169 (46%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCG-QGSTDDELSPNCVSSLLGIQIEGVAAGLWH 363
IACG +HS +T+ G L +G GQ G + SP + SL GI + ++AG H
Sbjct: 121 IACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPQHLQSLCGIPVAQISAGGNH 180
Query: 364 TICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
+ +S G V+ +P ++ SL + S+SCG HTA ++
Sbjct: 181 SFVLSLSGVVFGWGSNSAGQLGLGDTTDRFIPTIVK--SLSGKKTVSISCGGEHTATLSK 238
Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLL 471
G VF +G +GQLG + D + P V + G V CG HTL+
Sbjct: 239 GGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELWGSKVSQVTCGRHHTLV 287
Score = 183 (69.5 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 49/156 (31%), Positives = 72/156 (46%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLY--GQCGQGSTDDELSPNCVSSLLGIQIEGVAA 359
V I+ GG HS V++ +G + FGWG GQ G G T D P V SL G + ++
Sbjct: 171 VAQISAGGNHSFVLSLSGVV--FGWGSNSAGQLGLGDTTDRFIPTIVKSLSGKKTVSISC 228
Query: 360 GLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
G HT +S G V+ + E PRL+ L V+CG HT
Sbjct: 229 GGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLV--AELWGSKVSQVTCGRHHTL 286
Query: 420 VIADDG-KVFCWGWNKYGQLGLGDVIDRNIPSQVTI 454
V D +++ +G GQLG G+ + +++P V +
Sbjct: 287 VFEDSSNQIYSFGCGMQGQLGNGEQVKQSVPLPVLL 322
Score = 161 (61.7 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 41/123 (33%), Positives = 64/123 (52%)
Query: 353 QIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETL-PRLLDAPSLENVHSKSV 411
Q+ +A G H++ +++DG ++ +QA T P+ L SL + +
Sbjct: 117 QVIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPQHLQ--SLCGIPVAQI 174
Query: 412 SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTL 470
S G H+ V++ G VF WG N GQLGLGD DR IP+ V ++ G +++CG HT
Sbjct: 175 SAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFIPTIVKSLSGKKTVSISCGGEHTA 234
Query: 471 LLA 473
L+
Sbjct: 235 TLS 237
Score = 141 (54.7 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 37/123 (30%), Positives = 53/123 (43%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
G I+CGG H+A ++ G + TFG G +GQ G S DE P V+ L G ++ V
Sbjct: 220 GKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELWGSKVSQVT 279
Query: 359 AGLWHTICIS-SDGDVYAXXXXXXXXXXXXXD--QAETLPRLLDAPSLENVHSKSVSCGA 415
G HT+ S +Y+ Q+ LP LL E K ++ G
Sbjct: 280 CGRHHTLVFEDSSNQIYSFGCGMQGQLGNGEQVKQSVPLPVLLPTECTEFTMEKLIA-GE 338
Query: 416 RHT 418
H+
Sbjct: 339 NHS 341
Score = 71 (30.1 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 25/97 (25%), Positives = 43/97 (44%)
Query: 30 ILSPLVVRLPLTVGSAWRDVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHG- 86
++ V PL G R V CG +MA+++ +L WG + LGQ + + G
Sbjct: 100 VMDQSTVCRPLK-GLENRQVIQIACGDQHSMALTNDGQLFVWGE-NALGQLGLRKEQAGT 157
Query: 87 EIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
+ P+ + + +AG H ++ G V+ WG
Sbjct: 158 QSPQHLQSLCGIPVAQISAGGNHSFVLSLSGVVFGWG 194
Score = 50 (22.7 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 220 GVRIATVAAGGRHTLALS 237
G+ +A ++AGG H+ LS
Sbjct: 168 GIPVAQISAGGNHSFVLS 185
>MGI|MGI:1913989 [details] [associations]
symbol:Rcc1 "regulator of chromosome condensation 1"
species:10090 "Mus musculus" [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0000794 "condensed nuclear chromosome"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=ISO;IDA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007052
"mitotic spindle organization" evidence=ISO] [GO:0007059
"chromosome segregation" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007088 "regulation of mitosis" evidence=ISO]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=ISO] [GO:0031492 "nucleosomal DNA binding" evidence=ISO]
[GO:0042393 "histone binding" evidence=ISO] [GO:0050790 "regulation
of catalytic activity" evidence=IDA] [GO:0051225 "spindle assembly"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
MGI:MGI:1913989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0007088 GO:GO:0007059 GO:GO:0051301
GO:GO:0007067 GO:GO:0007052 GO:GO:0051225 GO:GO:0000082
GO:GO:0031965 GO:GO:0000790 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0000794 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0007090 GO:GO:0031492 GeneTree:ENSGT00700000104160 KO:K11493
CTD:1104 HOGENOM:HOG000234341 HOVERGEN:HBG017712 EMBL:AK150153
EMBL:BC019807 IPI:IPI00626402 RefSeq:NP_598639.1 UniGene:Mm.255045
ProteinModelPortal:Q8VE37 SMR:Q8VE37 MINT:MINT-2568412
STRING:Q8VE37 PhosphoSite:Q8VE37 PaxDb:Q8VE37 PRIDE:Q8VE37
Ensembl:ENSMUST00000084250 Ensembl:ENSMUST00000105951 GeneID:100088
KEGG:mmu:100088 OrthoDB:EOG4320Z9 ChiTaRS:RCC1 NextBio:354253
Bgee:Q8VE37 CleanEx:MM_RCC1 Genevestigator:Q8VE37
GermOnline:ENSMUSG00000028896 Uniprot:Q8VE37
Length = 421
Score = 164 (62.8 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 51/167 (30%), Positives = 82/167 (49%)
Query: 311 HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
H + T+ G +LT G G GQ G G + E + LL ++ A G+ HT+C+S
Sbjct: 27 HRSHNTEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQDVVQAEAGGM-HTVCLSQS 85
Query: 371 GDVYAXX--XXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVF 428
G VY+ + +E +P ++ E V VS G HTA + +DG+VF
Sbjct: 86 GQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQ--EKV--VQVSAGDSHTAALTEDGRVF 141
Query: 429 CWGW--NKYGQLGLGDVIDRN-IPSQVTIEGCVPRNVACGWWHTLLL 472
WG + G +GL + + ++ +P QV ++ V + VA G H ++L
Sbjct: 142 LWGSFRDNNGVIGLLEPMKKSMVPVQVQLDAPVVK-VASGNDHLVML 187
Score = 155 (59.6 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 51/172 (29%), Positives = 73/172 (42%)
Query: 307 CGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE--GVAAGLWHT 364
CG + I+ G + FG Y Q G T P ++S G + G HT
Sbjct: 247 CGAYFTFAISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHT 306
Query: 365 ICISSDGDVYAXXXXXXXXXXXXXDQAE-TLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
+C+ S+G Y+ E ++P L+ L V SV+CGA ++
Sbjct: 307 VCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISR--LPVV--SSVACGASVGYAVSK 362
Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVT---IEGCVPRNVACGWWHTLLL 472
DG+VF WG QLG G D P ++T +E V V+ G HT+LL
Sbjct: 363 DGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLL 414
Score = 109 (43.4 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 34/118 (28%), Positives = 50/118 (42%)
Query: 308 GGRHSAVITDA-GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC 366
GG+H V D+ G + G YG+ G G +E S + S L + + VA G
Sbjct: 301 GGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPV-VSSVACGASVGYA 359
Query: 367 ISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
+S DG V+A D+ P + LEN +VS G +HT ++ D
Sbjct: 360 VSKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLLVKD 417
Score = 85 (35.0 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 26/100 (26%), Positives = 46/100 (46%)
Query: 24 LPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSG 83
L ++ P L PL+ + VC +S S ++ ++G D+ TS
Sbjct: 55 LERKKPALVPLLQDVVQAEAGGMHTVC---------LSQSGQVYSFGCNDEGALGRDTSV 105
Query: 84 KHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
+ E+ P + + +V+ +AG +H A+TE G V+ WG
Sbjct: 106 EGSEMV-PGKVELQEKVVQVSAGDSHTAALTEDGRVFLWG 144
Score = 84 (34.6 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 26/83 (31%), Positives = 40/83 (48%)
Query: 53 GCGFAMAISDSRKLITWGS-TDDLGQ-SYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
G A+++ ++ WGS D+ G + K +P L +A +VK A+G H
Sbjct: 127 GDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQL--DAPVVKVASGNDHL 184
Query: 111 VAVTEGGEVYTWGWKECVPSGRV 133
V +T G++YT G E GRV
Sbjct: 185 VMLTNDGDLYTLGCGEQGQLGRV 207
Score = 76 (31.8 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 28/105 (26%), Positives = 44/105 (41%)
Query: 273 SSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
+ YG+ L G+ P R+P V +ACG ++ G + +G G
Sbjct: 321 AEYGR---LGLGEGAEEKSIPTLISRLP--VVSSVACGASVGYAVSKDGRVFAWGMGTNY 375
Query: 331 QCGQGSTDDELSPNCVSSLLGIQIEG-----VAAGLWHTICISSD 370
Q G G +D SP + G Q+E V++G HT+ + D
Sbjct: 376 QLGTGQDEDAWSP---VEMTGKQLENRVVLTVSSGGQHTVLLVKD 417
Score = 69 (29.3 bits), Expect = 1.8e-11, Sum P(3) = 1.8e-11
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 87 EIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLS 138
E +P +P +V+A AG H V +++ G+VY++G C G + D S
Sbjct: 56 ERKKPALVPLLQDVVQAEAGGMHTVCLSQSGQVYSFG---CNDEGALGRDTS 104
Score = 41 (19.5 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 12/26 (46%), Positives = 13/26 (50%)
Query: 212 PCLVTLNPGVRIATVAAGGRHTLALS 237
P LV L V AGG HT+ LS
Sbjct: 60 PALVPLLQDV--VQAEAGGMHTVCLS 83
Score = 40 (19.1 bits), Expect = 1.8e-11, Sum P(3) = 1.8e-11
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 222 RIATVAAGGRHTLALSD 238
++ V+AG HT AL++
Sbjct: 120 KVVQVSAGDSHTAALTE 136
>DICTYBASE|DDB_G0276527 [details] [associations]
symbol:DDB_G0276527 "putative bifunctional
serine/threonine-protein kinase/ubiquitin-protein ligase
DDB_G0276527" species:44689 "Dictyostelium discoideum" [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0006468 "protein phosphorylation" evidence=IEA]
[GO:0006464 "cellular protein modification process" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0004672 "protein kinase activity"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 InterPro:IPR000719 InterPro:IPR008271
InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143
dictyBase:DDB_G0276527 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AAFI02000015 SUPFAM:SSF56204 HSSP:Q9H0M0
RefSeq:XP_643080.1 ProteinModelPortal:Q8SSY6
EnsemblProtists:DDB0219986 GeneID:8620484 KEGG:ddi:DDB_G0276527
InParanoid:Q8SSY6 OMA:IITIIVE Uniprot:Q8SSY6
Length = 1887
Score = 175 (66.7 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 52/186 (27%), Positives = 88/186 (47%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD--DELSPNCVSSLLGIQIEGVAAGLW 362
++CG SAVITD G L TFG G +G+ G G + +P V SL G I +++G
Sbjct: 343 LSCGTNRSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDMSSGGG 402
Query: 363 HTICISSDGDVYAXXXXXXXXXXXX-XDQAETLPRLLD------APSLENVHSKSVSCGA 415
H++ +++ G V++ +T+P+ + + ++ VS G
Sbjct: 403 HSLVLTNKGLVFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPINIIKVSAGG 462
Query: 416 RHTAVIADDGKVFCWGWNKYGQLGLG-DVI-DRNIPSQVTIEGCVPRNV-----ACGWWH 468
H+ I+D+ + WG + YG LG DV DRN+P + V NV + G+ H
Sbjct: 463 YHSIAISDNNDTYAWGRSDYGVLGTSIDVQGDRNLPVLINSNSVVVDNVKFIDVSSGFQH 522
Query: 469 TLLLAV 474
+ +++
Sbjct: 523 NVAMSI 528
Score = 157 (60.3 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 53/172 (30%), Positives = 83/172 (48%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGS-TDDELSPNCVS--------SL 349
G+++ ++ GG HS V+T+ G + +FG GQ G G ++ + P +
Sbjct: 391 GHFIIDMSSGGGHSLVLTNKGLVFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQQ 450
Query: 350 LGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXD-QAE-TLPRLLDAPSL--EN 405
I I V+AG +H+I IS + D YA D Q + LP L+++ S+ +N
Sbjct: 451 QPINIIKVSAGGYHSIAISDNNDTYAWGRSDYGVLGTSIDVQGDRNLPVLINSNSVVVDN 510
Query: 406 VHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC 457
V VS G +H ++ DG ++ WG N GQ LG D N Q+T + C
Sbjct: 511 VKFIDVSSGFQHNVAMSIDGSLYSWGCNA-GQR-LGFKSDEN---QLTPKKC 557
Score = 79 (32.9 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 24/82 (29%), Positives = 36/82 (43%)
Query: 60 ISDSRKLITWGS--TDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGG 117
I+D L T+G LG + S ++ E F +V A G H +A+T G
Sbjct: 203 ITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKPSLRVVSIANGGKHSLALTICG 262
Query: 118 EVYTWGWKECVPSGRVFGDLST 139
+VY+WG + G G S+
Sbjct: 263 KVYSWGGNDSCQLGLGNGSSSS 284
Score = 62 (26.9 bits), Expect = 5.3e-11, Sum P(3) = 5.3e-11
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 204 GDENLSAF--PCLVTL---NPGVRIATVAAGGRHTLALS 237
G NL ++ P LV P +R+ ++A GG+H+LAL+
Sbjct: 221 GHGNLESYSSPKLVEFFQTKPSLRVVSIANGGKHSLALT 259
Score = 46 (21.3 bits), Expect = 5.3e-11, Sum P(3) = 5.3e-11
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 97 EASIVKAAAGWAHCVAVTEGGEVYTWG 123
+ IV + G H +T+ G +YT+G
Sbjct: 187 QQKIVLISTGAIHSSFITDQGNLYTFG 213
Score = 41 (19.5 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 100 IVKAAAGWAHCVAVTEGGEVYTWG 123
IVK + G +T+ G ++T+G
Sbjct: 340 IVKLSCGTNRSAVITDKGLLFTFG 363
>UNIPROTKB|P18754 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0007088
"regulation of mitosis" evidence=IDA] [GO:0000082 "G1/S transition
of mitotic cell cycle" evidence=IMP] [GO:0007090 "regulation of S
phase of mitotic cell cycle" evidence=IMP] [GO:0042393 "histone
binding" evidence=IDA] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000794 "condensed nuclear chromosome" evidence=IDA]
[GO:0007052 "mitotic spindle organization" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0031492 "nucleosomal DNA binding" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007059
"chromosome segregation" evidence=IMP] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0016032 "viral reproduction" evidence=TAS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 Reactome:REACT_116125 GO:GO:0007088 GO:GO:0007059
GO:GO:0005654 GO:GO:0016032 GO:GO:0051301 GO:GO:0007067
GO:GO:0007052 GO:GO:0051225 GO:GO:0000082 GO:GO:0031965
GO:GO:0000790 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0000794 GO:GO:0042393 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0007090 GO:GO:0031492 PDB:1I2M PDBsum:1I2M KO:K11493
EMBL:X12654 EMBL:X06130 EMBL:D00591 EMBL:AF498924 EMBL:BC007300
EMBL:BC010067 EMBL:BC036903 EMBL:BC069198 EMBL:S75708
IPI:IPI00001661 IPI:IPI00747309 PIR:A26691 RefSeq:NP_001041659.1
RefSeq:NP_001041660.1 RefSeq:NP_001041664.1 RefSeq:NP_001260.1
UniGene:Hs.469723 PDB:1A12 PDBsum:1A12 ProteinModelPortal:P18754
SMR:P18754 DIP:DIP-35416N IntAct:P18754 MINT:MINT-240062
STRING:P18754 PhosphoSite:P18754 DMDM:132170 PaxDb:P18754
PRIDE:P18754 DNASU:1104 Ensembl:ENST00000373831
Ensembl:ENST00000373832 Ensembl:ENST00000373833
Ensembl:ENST00000398958 GeneID:1104 KEGG:hsa:1104 UCSC:uc001bqa.2
UCSC:uc001bqf.2 CTD:1104 GeneCards:GC01P028834 HGNC:HGNC:1913
HPA:CAB015413 HPA:HPA027573 HPA:HPA027574 MIM:179710
neXtProt:NX_P18754 PharmGKB:PA26449 HOGENOM:HOG000234341
HOVERGEN:HBG017712 OMA:RETTEEG PhylomeDB:P18754
EvolutionaryTrace:P18754 GenomeRNAi:1104 NextBio:4572
ArrayExpress:P18754 Bgee:P18754 CleanEx:HS_RCC1
Genevestigator:P18754 GermOnline:ENSG00000180198 Uniprot:P18754
Length = 421
Score = 162 (62.1 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 51/167 (30%), Positives = 81/167 (48%)
Query: 311 HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
H + T+ G +LT G G GQ G G E + S+ ++ A G+ HT+C+S
Sbjct: 27 HRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDVVQAEAGGM-HTVCLSKS 85
Query: 371 GDVYAXX--XXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVF 428
G VY+ + +E +P ++ E V VS G HTA + DDG+VF
Sbjct: 86 GQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQ--EKV--VQVSAGDSHTAALTDDGRVF 141
Query: 429 CWGW--NKYGQLGLGDVIDRN-IPSQVTIEGCVPRNVACGWWHTLLL 472
WG + G +GL + + ++ +P QV ++ V + VA G H ++L
Sbjct: 142 LWGSFRDNNGVIGLLEPMKKSMVPVQVQLDVPVVK-VASGNDHLVML 187
Score = 154 (59.3 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 50/172 (29%), Positives = 73/172 (42%)
Query: 307 CGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE--GVAAGLWHT 364
CG + I+ G + FG Y Q G T+ P ++S G + G HT
Sbjct: 247 CGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQHHT 306
Query: 365 ICISSDGDVYAXXXXXXXXXXXXXDQAE-TLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
+C+ S+G Y+ E ++P L+ L V SV+CGA +
Sbjct: 307 VCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISR--LPAV--SSVACGASVGYAVTK 362
Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVT---IEGCVPRNVACGWWHTLLL 472
DG+VF WG QLG G D P ++ +E V +V+ G HT+LL
Sbjct: 363 DGRVFAWGMGTNYQLGTGQDEDAWSPVEMMGKQLENRVVLSVSSGGQHTVLL 414
Score = 128 (50.1 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 51/180 (28%), Positives = 78/180 (43%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQ---------GSTDDE--LSPNCV-----SS 348
+A G H ++T G L T G G GQ G+ G E L P CV S
Sbjct: 177 VASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGS 236
Query: 349 LLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHS 408
++ + G + T IS +G VY ++ +P+ L S +N
Sbjct: 237 RGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLT--SFKNSTK 294
Query: 409 KSV--SCGARHTAVIADDGKVFCWGWNKYGQLGLGD-VIDRNIPSQVTIEGCVPRNVACG 465
V S G HT + +GK + G +YG+LGLG+ +++IP+ ++ V +VACG
Sbjct: 295 SWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVS-SVACG 353
Score = 109 (43.4 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 35/119 (29%), Positives = 50/119 (42%)
Query: 308 GGRHSAVITDA-GALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVAAGLWHTI 365
GG+H V D+ G + G YG+ G G +E S P +S L + VA G
Sbjct: 301 GGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVS--SVACGASVGY 358
Query: 366 CISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
++ DG V+A D+ P + LEN SVS G +HT ++ D
Sbjct: 359 AVTKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMMGKQLENRVVLSVSSGGQHTVLLVKD 417
Score = 102 (41.0 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 52/202 (25%), Positives = 83/202 (41%)
Query: 274 SYGKDRSAALSRGSVNSEGPGFRVPGNY-----VKGIACGGRHSAVITDAGALLTFGWGL 328
S+G + AL R + + EG VPG V ++ G H+A +TD G + F WG
Sbjct: 90 SFGCNDEGALGRDT-SVEGSEM-VPGKVELQEKVVQVSAGDSHTAALTDDGRV--FLWGS 145
Query: 329 Y-GQCGQGSTDDELSPNCV--SSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXX 385
+ G + + + V L + + VA+G H + +++DGD+Y
Sbjct: 146 FRDNNGVIGLLEPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLG 205
Query: 386 XXXDQ------AETLPRLL--------DAPSLENVHSKSVSCGARHTAVIADDGKVFCWG 431
+ + L RLL S +V + CGA T I+ +G V+ +G
Sbjct: 206 RVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFG 265
Query: 432 WNKYGQLGLGDVIDRNIPSQVT 453
+ Y QLG IP +T
Sbjct: 266 LSNYHQLGTPGTESCFIPQNLT 287
Score = 84 (34.6 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 29/98 (29%), Positives = 45/98 (45%)
Query: 53 GCGFAMAISDSRKLITWGS-TDDLGQ-SYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
G A++D ++ WGS D+ G + K +P L + +VK A+G H
Sbjct: 127 GDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQL--DVPVVKVASGNDHL 184
Query: 111 VAVTEGGEVYTWGWKECVPSGRV---FGDLSTGTGLDK 145
V +T G++YT G E GRV F + GL++
Sbjct: 185 VMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLER 222
Score = 84 (34.6 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 29/105 (27%), Positives = 45/105 (42%)
Query: 273 SSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
+ YG+ L G+ P R+P V +ACG +T G + +G G
Sbjct: 321 AEYGR---LGLGEGAEEKSIPTLISRLPA--VSSVACGASVGYAVTKDGRVFAWGMGTNY 375
Query: 331 QCGQGSTDDELSPNCVSSLLGIQIEG-----VAAGLWHTICISSD 370
Q G G +D SP ++G Q+E V++G HT+ + D
Sbjct: 376 QLGTGQDEDAWSP---VEMMGKQLENRVVLSVSSGGQHTVLLVKD 417
Score = 82 (33.9 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 25/91 (27%), Positives = 45/91 (49%)
Query: 33 PLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPF 92
P +V +P V A GG + +S S ++ ++G D+ TS + E+ P
Sbjct: 60 PALVSIPEDVVQAE----AGGM-HTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMV-PG 113
Query: 93 PLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
+ + +V+ +AG +H A+T+ G V+ WG
Sbjct: 114 KVELQEKVVQVSAGDSHTAALTDDGRVFLWG 144
Score = 64 (27.6 bits), Expect = 3.1e-11, Sum P(3) = 3.1e-11
Identities = 22/74 (29%), Positives = 39/74 (52%)
Query: 66 LITWGSTDDLGQSYVTSGKHG-EIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGW 124
++T G D+GQ + G++ E +P + +V+A AG H V +++ G+VY++G
Sbjct: 37 VLTLGQ-GDVGQ--LGLGENVMERKKPALVSIPEDVVQAEAGGMHTVCLSKSGQVYSFG- 92
Query: 125 KECVPSGRVFGDLS 138
C G + D S
Sbjct: 93 --CNDEGALGRDTS 104
Score = 44 (20.5 bits), Expect = 3.1e-11, Sum P(3) = 3.1e-11
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 222 RIATVAAGGRHTLALSD 238
++ V+AG HT AL+D
Sbjct: 120 KVVQVSAGDSHTAALTD 136
Score = 42 (19.8 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 212 PCLVTLNPGVRIATVAAGGRHTLALS 237
P LV++ V AGG HT+ LS
Sbjct: 60 PALVSIPEDV--VQAEAGGMHTVCLS 83
>ZFIN|ZDB-GENE-090311-16 [details] [associations]
symbol:si:ch211-281g13.4 "si:ch211-281g13.4"
species:7955 "Danio rerio" [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-090311-16 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
eggNOG:COG5021 HOGENOM:HOG000208452 HOVERGEN:HBG050878
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00923765
RefSeq:NP_001139174.1 UniGene:Dr.150552 Ensembl:ENSDART00000138510
GeneID:794323 NextBio:20931808 Uniprot:B8A4S5
Length = 985
Score = 205 (77.2 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 53/170 (31%), Positives = 80/170 (47%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL-SPNCVSSLLGIQIEGVAAGLWH 363
IACG +HS +++ G L +G +GQ G + SP + SL GI + ++AG H
Sbjct: 123 IACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQSPQHLQSLCGIPVAQISAGGNH 182
Query: 364 TICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
+ +S G V+ +P ++ SL + S+SCG HTA ++
Sbjct: 183 SFVLSLSGVVFGWGSNSAGQLGLGDTTDRFVPTIVK--SLSGKKTVSISCGGEHTATLSK 240
Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
G VF +G +GQLG + D + P V + G V CG HTL+L
Sbjct: 241 GGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELWGSKVSQVTCGRHHTLVL 290
Score = 181 (68.8 bits), Expect = 1.8e-12, Sum P(3) = 1.8e-12
Identities = 49/156 (31%), Positives = 73/156 (46%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLY--GQCGQGSTDDELSPNCVSSLLGIQIEGVAA 359
V I+ GG HS V++ +G + FGWG GQ G G T D P V SL G + ++
Sbjct: 173 VAQISAGGNHSFVLSLSGVV--FGWGSNSAGQLGLGDTTDRFVPTIVKSLSGKKTVSISC 230
Query: 360 GLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
G HT +S G V+ + E PRL+ L V+CG HT
Sbjct: 231 GGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLV--AELWGSKVSQVTCGRHHTL 288
Query: 420 V-IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI 454
V +A +++ +G GQLG G+ + +++P V +
Sbjct: 289 VLVALTNRIYSFGCGMQGQLGNGEQVKQSVPLPVLL 324
Score = 159 (61.0 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 49/174 (28%), Positives = 80/174 (45%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
++ I CG + ++ D G +L Y C P + L ++ +A G
Sbjct: 81 IRSIVCGEDGAVLLADGGKVLLMD--KYTVC---------RP--LKGLDNTKVIQIACGD 127
Query: 362 WHTICISSDGDVYAXXXXXXXXXXXXXDQAETL-PRLLDAPSLENVHSKSVSCGARHTAV 420
H++ +S+DG ++ +QA P+ L SL + +S G H+ V
Sbjct: 128 QHSVALSNDGQLFVWGENAHGQLGLRKEQALIQSPQHLQ--SLCGIPVAQISAGGNHSFV 185
Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLA 473
++ G VF WG N GQLGLGD DR +P+ V ++ G +++CG HT L+
Sbjct: 186 LSLSGVVFGWGSNSAGQLGLGDTTDRFVPTIVKSLSGKKTVSISCGGEHTATLS 239
Score = 135 (52.6 bits), Expect = 2.5e-07, Sum P(3) = 2.5e-07
Identities = 26/69 (37%), Positives = 37/69 (53%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
G I+CGG H+A ++ G + TFG G +GQ G S DE P V+ L G ++ V
Sbjct: 222 GKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELWGSKVSQVT 281
Query: 359 AGLWHTICI 367
G HT+ +
Sbjct: 282 CGRHHTLVL 290
Score = 56 (24.8 bits), Expect = 1.8e-12, Sum P(3) = 1.8e-12
Identities = 8/24 (33%), Positives = 16/24 (66%)
Query: 100 IVKAAAGWAHCVAVTEGGEVYTWG 123
+++ A G H VA++ G+++ WG
Sbjct: 120 VIQIACGDQHSVALSNDGQLFVWG 143
Score = 50 (22.7 bits), Expect = 1.8e-12, Sum P(3) = 1.8e-12
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 220 GVRIATVAAGGRHTLALS 237
G+ +A ++AGG H+ LS
Sbjct: 170 GIPVAQISAGGNHSFVLS 187
Score = 39 (18.8 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 6/17 (35%), Positives = 13/17 (76%)
Query: 222 RIATVAAGGRHTLALSD 238
++ +A G +H++ALS+
Sbjct: 119 KVIQIACGDQHSVALSN 135
>ZFIN|ZDB-GENE-090313-139 [details] [associations]
symbol:herc3 "hect domain and RLD 3" species:7955
"Danio rerio" [GO:0006464 "cellular protein modification process"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-090313-139
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 CTD:8916 HOGENOM:HOG000208452
HOVERGEN:HBG050878 OMA:SPAVDFR OrthoDB:EOG4RBQHS EMBL:CU467858
IPI:IPI00901161 RefSeq:NP_001139096.1 UniGene:Dr.86009
Ensembl:ENSDART00000112994 Ensembl:ENSDART00000141977
GeneID:100003587 NextBio:20785898 Uniprot:B8JLD4
Length = 1046
Score = 201 (75.8 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 51/174 (29%), Positives = 79/174 (45%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVAAG 360
+ G++CG HS + + G + +G G GQ G G+ ++ + P + L +I V G
Sbjct: 86 ISGVSCGQAHSLAVNEQGQVFAWGAGDGGQLGLGTAEEAVRVPRLIKKLCEHRISQVMCG 145
Query: 361 LWHTICISSDGDVYAXXXXXXXXXXXXXDQAETL-PRLLDAPSLENVHSKSVSCGARHTA 419
H I +S DG ++ + TL P+ L SL + +S G H+
Sbjct: 146 NHHCIALSKDGQLFVWGENSSGQLGLGKGEPSTLSPQPLK--SLCGIPLTQISAGGDHSF 203
Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
++ G VF WG N GQLGL D DR +P + + ++CG HT L
Sbjct: 204 ALSFSGAVFGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQKVVYISCGEEHTAAL 257
Score = 188 (71.2 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 50/178 (28%), Positives = 79/178 (44%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
G +K +ACG +HS + G++ T G GQ G P V +L +I GV+
Sbjct: 33 GRGLKEVACGNQHSLFLLHDGSVYTCGSNSCGQLGHDKGGSR--PELVGALDAQKISGVS 90
Query: 359 AGLWHTICISSDGDVYA-XXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARH 417
G H++ ++ G V+A ++A +PRL+ + V CG H
Sbjct: 91 CGQAHSLAVNEQGQVFAWGAGDGGQLGLGTAEEAVRVPRLIKKLCEHRI--SQVMCGNHH 148
Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC-VP-RNVACGWWHTLLLA 473
++ DG++F WG N GQLGLG + Q C +P ++ G H+ L+
Sbjct: 149 CIALSKDGQLFVWGENSSGQLGLGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFALS 206
Score = 153 (58.9 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 51/192 (26%), Positives = 81/192 (42%)
Query: 275 YGKDRSAALSRG----SVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY- 329
+G++ S L G S S P + G + I+ GG HS ++ +GA+ FGWG
Sbjct: 161 WGENSSGQLGLGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFALSFSGAV--FGWGKNS 218
Query: 330 -GQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXX 388
GQ G D P + L ++ ++ G HT ++ +G ++
Sbjct: 219 AGQLGLNDEQDRAVPCHIKFLRSQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQLGHDS 278
Query: 389 DQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
+ E LPR + L ++CG HT A + G ++ +G N GQLG G I +
Sbjct: 279 TRNEPLPRRV--MELMGTEVSQIACGRNHTLAFVPSTGLIYAFGCNTQGQLGTG--IRGS 334
Query: 448 IPSQVTIEGCVP 459
S V + P
Sbjct: 335 AKSPVPVSNIQP 346
Score = 94 (38.1 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 27/105 (25%), Positives = 50/105 (47%)
Query: 39 PLTVGSA-WRDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHG-EIPEPFPL 94
P VG+ + + G CG A +A+++ ++ WG+ D GQ + + + +P
Sbjct: 75 PELVGALDAQKISGVSCGQAHSLAVNEQGQVFAWGAGDG-GQLGLGTAEEAVRVPRLIKK 133
Query: 95 PTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLST 139
E I + G HC+A+++ G+++ WG G G+ ST
Sbjct: 134 LCEHRISQVMCGNHHCIALSKDGQLFVWGENSSGQLGLGKGEPST 178
Score = 69 (29.3 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 24/81 (29%), Positives = 34/81 (41%)
Query: 43 GSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVK 102
G ++V G + D + T GS + GQ + K G PE I
Sbjct: 33 GRGLKEVACGNQHSLFLLHDG-SVYTCGS-NSCGQ--LGHDKGGSRPELVGALDAQKISG 88
Query: 103 AAAGWAHCVAVTEGGEVYTWG 123
+ G AH +AV E G+V+ WG
Sbjct: 89 VSCGQAHSLAVNEQGQVFAWG 109
Score = 47 (21.6 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 15/63 (23%), Positives = 26/63 (41%)
Query: 66 LITWGSTDDLGQSYVTSGKHGEI-PEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGW 124
++ WGS+ GQ + + + P + + + A G H + + G VYT G
Sbjct: 2 MLCWGSSG-AGQLGIGASEASVFEPRSCCVFDGRGLKEVACGNQHSLFLLHDGSVYTCGS 60
Query: 125 KEC 127
C
Sbjct: 61 NSC 63
Score = 37 (18.1 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSD 238
G + + P LV +I+ V+ G H+LA+++
Sbjct: 67 GHDKGGSRPELVGALDAQKISGVSCGQAHSLAVNE 101
>UNIPROTKB|I3LT85 [details] [associations]
symbol:RCC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051225 "spindle assembly" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0031492 "nucleosomal DNA binding" evidence=IEA]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=IEA] [GO:0007088 "regulation of mitosis" evidence=IEA]
[GO:0007059 "chromosome segregation" evidence=IEA] [GO:0007052
"mitotic spindle organization" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
GO:GO:0007088 GO:GO:0007059 GO:GO:0007052 GO:GO:0051225
GO:GO:0000082 GO:GO:0031965 GO:GO:0000790 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0000794 GO:GO:0005087
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0007090 GO:GO:0031492 GeneTree:ENSGT00700000104160 KO:K11493
CTD:1104 OMA:GTESCFV EMBL:FP565629 RefSeq:XP_003482053.1
Ensembl:ENSSSCT00000028011 GeneID:100621543 KEGG:ssc:100621543
Uniprot:I3LT85
Length = 421
Score = 154 (59.3 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 50/172 (29%), Positives = 74/172 (43%)
Query: 307 CGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGV--AAGLWHT 364
CG + I+ G + FG Y Q G T+ P ++S V + G HT
Sbjct: 247 CGAYFTFAISSEGHVYGFGLSNYHQLGTPGTESCFVPQNLTSFKNSTKSWVRFSGGQHHT 306
Query: 365 ICISSDGDVYAXXXXXXXXXXXXXDQAE-TLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
+C+ S+G Y+ E ++P L+ L V SV+CGA +
Sbjct: 307 VCMDSEGRAYSLGRAEYGRLGLGEGAEEKSVPTLISR--LPAV--SSVACGASVGYAVTK 362
Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVT---IEGCVPRNVACGWWHTLLL 472
DG+VF WG QLG G D P ++T +E + +V+ G HT+LL
Sbjct: 363 DGRVFAWGMGTNYQLGTGQEEDAWSPVEMTGKQLENRMVLSVSSGGQHTVLL 414
Score = 150 (57.9 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 49/167 (29%), Positives = 79/167 (47%)
Query: 311 HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
H + T+ G +LT G G GQ G G E + + ++ A G+ HT+C+S
Sbjct: 27 HRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVPIPEDIVQAEAGGM-HTVCLSKS 85
Query: 371 GDVYAXX--XXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVF 428
G VY+ + +E +P ++ E V VS G HTA + +DG+VF
Sbjct: 86 GQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQ--EKV--VQVSAGDSHTAALTEDGRVF 141
Query: 429 CWGW--NKYGQLGLGDVIDRN-IPSQVTIEGCVPRNVACGWWHTLLL 472
WG + G +GL + + ++ +P QV + V + VA G H ++L
Sbjct: 142 LWGSFRDNNGVIGLLEPMKKSMVPVQVQLSMPVVK-VASGNDHLVML 187
Score = 108 (43.1 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 34/119 (28%), Positives = 50/119 (42%)
Query: 308 GGRHSAVITDA-GALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVAAGLWHTI 365
GG+H V D+ G + G YG+ G G +E S P +S L + VA G
Sbjct: 301 GGQHHTVCMDSEGRAYSLGRAEYGRLGLGEGAEEKSVPTLISRLPAVS--SVACGASVGY 358
Query: 366 CISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
++ DG V+A ++ P + LEN SVS G +HT ++ D
Sbjct: 359 AVTKDGRVFAWGMGTNYQLGTGQEEDAWSPVEMTGKQLENRMVLSVSSGGQHTVLLVKD 417
Score = 87 (35.7 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 34/128 (26%), Positives = 52/128 (40%)
Query: 257 SRIRMVSSPHPIPCIES---SYGKDRSA----ALSRGSVNSEGPGF--RVPGNYVKGIAC 307
S +R H C++S +Y R+ L G+ P R+P V +AC
Sbjct: 295 SWVRFSGGQHHTVCMDSEGRAYSLGRAEYGRLGLGEGAEEKSVPTLISRLPA--VSSVAC 352
Query: 308 GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG-----VAAGLW 362
G +T G + +G G Q G G +D SP + G Q+E V++G
Sbjct: 353 GASVGYAVTKDGRVFAWGMGTNYQLGTGQEEDAWSP---VEMTGKQLENRMVLSVSSGGQ 409
Query: 363 HTICISSD 370
HT+ + D
Sbjct: 410 HTVLLVKD 417
Score = 83 (34.3 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 21/72 (29%), Positives = 38/72 (52%)
Query: 52 GGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCV 111
GG + +S S ++ ++G D+ TS + E+ P + + +V+ +AG +H
Sbjct: 75 GGM-HTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMV-PGKVELQEKVVQVSAGDSHTA 132
Query: 112 AVTEGGEVYTWG 123
A+TE G V+ WG
Sbjct: 133 ALTEDGRVFLWG 144
Score = 79 (32.9 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12
Identities = 29/98 (29%), Positives = 44/98 (44%)
Query: 53 GCGFAMAISDSRKLITWGS-TDDLGQ-SYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
G A+++ ++ WGS D+ G + K +P L +VK A+G H
Sbjct: 127 GDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQL--SMPVVKVASGNDHL 184
Query: 111 VAVTEGGEVYTWGWKECVPSGRV---FGDLSTGTGLDK 145
V +T GE+YT G E GRV F + GL++
Sbjct: 185 VMLTADGELYTLGSGEQGQLGRVPELFANRGGRQGLER 222
Score = 73 (30.8 bits), Expect = 9.5e-12, Sum P(3) = 9.5e-12
Identities = 24/74 (32%), Positives = 40/74 (54%)
Query: 66 LITWGSTDDLGQSYVTSGKHG-EIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGW 124
++T G D+GQ + G++ E +P +P IV+A AG H V +++ G+VY++G
Sbjct: 37 VLTLGQ-GDVGQ--LGLGENVMERKKPALVPIPEDIVQAEAGGMHTVCLSKSGQVYSFG- 92
Query: 125 KECVPSGRVFGDLS 138
C G + D S
Sbjct: 93 --CNDEGALGRDTS 104
Score = 40 (19.1 bits), Expect = 9.5e-12, Sum P(3) = 9.5e-12
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 222 RIATVAAGGRHTLALSD 238
++ V+AG HT AL++
Sbjct: 120 KVVQVSAGDSHTAALTE 136
Score = 40 (19.1 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 11/26 (42%), Positives = 13/26 (50%)
Query: 212 PCLVTLNPGVRIATVAAGGRHTLALS 237
P LV + I AGG HT+ LS
Sbjct: 60 PALVPIPED--IVQAEAGGMHTVCLS 83
>UNIPROTKB|E2QZC2 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
Ensembl:ENSCAFT00000029828 Uniprot:E2QZC2
Length = 701
Score = 185 (70.2 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 47/165 (28%), Positives = 81/165 (49%)
Query: 282 ALSRGSVNSEGPGF--RV----PGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG 335
AL G+V + P F R G +K +ACG +A +TD G ++TFG G G G G
Sbjct: 376 ALLPGAVEQQQPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHG 435
Query: 336 STDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLP 395
S +D P V +LLG ++ VA G H + +S++ +++A ++ + P
Sbjct: 436 SLNDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHSCP 495
Query: 396 RLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL 440
+ + P + ++ V CG + ++ G+ G N++ +LGL
Sbjct: 496 QQVSMPPGQE--AQRVVCGIDSSMILTVPGRALACGSNRFNKLGL 538
Score = 140 (54.3 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 47/180 (26%), Positives = 78/180 (43%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCG----QGSTDDELSPNCVSSLL----GIQIEG 356
+A G A +T +G L+ + G G G+ + + P VS L G+ I+
Sbjct: 346 VAAGRTQKAGVTRSGRLILWEAPPLGAGGGALLPGAVEQQ-QPQFVSRFLEGQSGVTIKH 404
Query: 357 VAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGAR 416
VA G T C++ G + + P +++A L V+CGA
Sbjct: 405 VACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEA--LLGYEMVQVACGAS 462
Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE-GCVPRNVACGWWHTLLLAVP 475
H ++ + ++F WG G+LGLG + P QV++ G + V CG +++L VP
Sbjct: 463 HVLALSTERELFAWGRGDGGRLGLGTRESHSCPQQVSMPPGQEAQRVVCGIDSSMILTVP 522
Score = 133 (51.9 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 54/224 (24%), Positives = 86/224 (38%)
Query: 274 SYGKDRSAALSRGSVNSEGPGFRV---PGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
++G+ L G+ S +V PG + + CG S ++T G L G +
Sbjct: 475 AWGRGDGGRLGLGTRESHSCPQQVSMPPGQEAQRVVCGIDSSMILTVPGRALACGSNRFN 534
Query: 331 QCGQG--STDDELSPNC-VSSLLGIQIEGVAA-----------GLWHTICISSDGDVYAX 376
+ G S +E +PN V L G A G H+ +++ GD Y
Sbjct: 535 KLGLDRLSLGEEPAPNQQVEEALSFTPLGSAPFDREPLLSVDLGTAHSAAVTASGDCYTF 594
Query: 377 XXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYG 436
+ P L+N+ V+CG T + +G+V+ WG G
Sbjct: 595 GSNQHGQLGTNARRVSRAP--CQVQGLQNIKIAMVACGDAFTVAVGAEGEVYSWGKGARG 652
Query: 437 QLGLGDVIDRNIPSQVTIEGCVP---RNVACGWWHTLLLAVPPT 477
+LG D D +P V ++ P +V+C +TLL P T
Sbjct: 653 RLGRRDE-DAGLPRPVQLDEIHPYTVTSVSCCHGNTLLAVRPVT 695
Score = 70 (29.7 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 30/108 (27%), Positives = 49/108 (45%)
Query: 20 LPGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCG--FAMAISDSRKLITWGSTDD--L 75
LPGA+ Q+ P V R G + + CG F ++D ++T+GS + L
Sbjct: 378 LPGAVEQQQP---QFVSRF--LEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCL 432
Query: 76 GQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
G + I E L E +V+ A G +H +A++ E++ WG
Sbjct: 433 GHGSLNDISQPTIVEAL-LGYE--MVQVACGASHVLALSTERELFAWG 477
Score = 56 (24.8 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 18/56 (32%), Positives = 22/56 (39%)
Query: 86 GEIPEPFPLPT-EASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTG 140
G + P LP +V+ AAG VT G + W E P G G L G
Sbjct: 328 GGLSAPLRLPMLNTEVVQVAAGRTQKAGVTRSGRLILW---EAPPLGAGGGALLPG 380
Score = 47 (21.6 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
Identities = 13/34 (38%), Positives = 16/34 (47%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS 237
G N + P +V G + VA G H LALS
Sbjct: 435 GSLNDISQPTIVEALLGYEMVQVACGASHVLALS 468
>RGD|1592835 [details] [associations]
symbol:Rcc1 "regulator of chromosome condensation 1"
species:10116 "Rattus norvegicus" [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0000794 "condensed nuclear chromosome"
evidence=ISO] [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0007052 "mitotic spindle
organization" evidence=ISO] [GO:0007059 "chromosome segregation"
evidence=ISO] [GO:0007088 "regulation of mitosis" evidence=ISO]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=ISO] [GO:0031492 "nucleosomal DNA binding" evidence=ISO]
[GO:0031965 "nuclear membrane" evidence=ISO] [GO:0042393 "histone
binding" evidence=ISO] [GO:0050790 "regulation of catalytic
activity" evidence=ISO] [GO:0051225 "spindle assembly"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] RGD:1592835
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 EMBL:CH473968 KO:K11493 CTD:1104
HOVERGEN:HBG017712 EMBL:BC160834 IPI:IPI00896784
RefSeq:NP_001121661.1 UniGene:Rn.217123 SMR:B1H227 GeneID:682908
KEGG:rno:682908 NextBio:724000 Genevestigator:B1H227 Uniprot:B1H227
Length = 421
Score = 162 (62.1 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 51/167 (30%), Positives = 82/167 (49%)
Query: 311 HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
H + T+ G +LT G G GQ G G + E + LL ++ A G+ HT+C+S
Sbjct: 27 HRSHNTEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQDVVQAEAGGM-HTVCLSQS 85
Query: 371 GDVYAXX--XXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVF 428
G VY+ + +E +P ++ E V VS G HTA + +DG+VF
Sbjct: 86 GQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQ--EKV--VQVSAGDSHTAALTEDGRVF 141
Query: 429 CWGW--NKYGQLGLGDVIDRN-IPSQVTIEGCVPRNVACGWWHTLLL 472
WG + G +GL + + ++ +P QV ++ V + VA G H ++L
Sbjct: 142 LWGSFRDNNGVIGLLEPMKKSMVPVQVQLDTQVVK-VASGNDHLVML 187
Score = 151 (58.2 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 51/177 (28%), Positives = 73/177 (41%)
Query: 307 CGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE--GVAAGLWHT 364
CG + I+ G + FG Y Q G T P ++S G + G HT
Sbjct: 247 CGAYFTFAISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHT 306
Query: 365 ICISSDGDVYAXXXXXXXXXXXXXDQAE-TLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
+C+ S+G Y+ E ++P L+ L V SV+CGA ++
Sbjct: 307 VCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISR--LPVV--SSVACGASVGYAVSK 362
Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVT---IEGCVPRNVACGWWHTLLLAVPPT 477
DG+VF WG QLG G D P ++T +E V+ G HT+LL T
Sbjct: 363 DGRVFAWGMGTNYQLGTGQEDDAWSPVEMTGKQLENREVLTVSSGGQHTVLLVKDKT 419
Score = 85 (35.0 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 29/98 (29%), Positives = 46/98 (46%)
Query: 53 GCGFAMAISDSRKLITWGS-TDDLGQ-SYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
G A+++ ++ WGS D+ G + K +P L T+ +VK A+G H
Sbjct: 127 GDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDTQ--VVKVASGNDHL 184
Query: 111 VAVTEGGEVYTWGWKECVPSGRV---FGDLSTGTGLDK 145
V +T G++YT G E GRV F + GL++
Sbjct: 185 VMLTTDGDLYTLGCGEQGQLGRVPELFANRGGRQGLER 222
Score = 85 (35.0 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 26/100 (26%), Positives = 46/100 (46%)
Query: 24 LPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSG 83
L ++ P L PL+ + VC +S S ++ ++G D+ TS
Sbjct: 55 LERKKPALVPLLQDVVQAEAGGMHTVC---------LSQSGQVYSFGCNDEGALGRDTSV 105
Query: 84 KHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
+ E+ P + + +V+ +AG +H A+TE G V+ WG
Sbjct: 106 EGSEMV-PGKVELQEKVVQVSAGDSHTAALTEDGRVFLWG 144
Score = 80 (33.2 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 29/105 (27%), Positives = 44/105 (41%)
Query: 273 SSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
+ YG+ L G+ P R+P V +ACG ++ G + +G G
Sbjct: 321 AEYGR---LGLGEGAEEKSIPTLISRLP--VVSSVACGASVGYAVSKDGRVFAWGMGTNY 375
Query: 331 QCGQGSTDDELSPNCVSSLLGIQIEG-----VAAGLWHTICISSD 370
Q G G DD SP + G Q+E V++G HT+ + D
Sbjct: 376 QLGTGQEDDAWSP---VEMTGKQLENREVLTVSSGGQHTVLLVKD 417
Score = 69 (29.3 bits), Expect = 5.4e-11, Sum P(3) = 5.4e-11
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 87 EIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLS 138
E +P +P +V+A AG H V +++ G+VY++G C G + D S
Sbjct: 56 ERKKPALVPLLQDVVQAEAGGMHTVCLSQSGQVYSFG---CNDEGALGRDTS 104
Score = 41 (19.5 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 12/26 (46%), Positives = 13/26 (50%)
Query: 212 PCLVTLNPGVRIATVAAGGRHTLALS 237
P LV L V AGG HT+ LS
Sbjct: 60 PALVPLLQDV--VQAEAGGMHTVCLS 83
Score = 40 (19.1 bits), Expect = 5.4e-11, Sum P(3) = 5.4e-11
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 222 RIATVAAGGRHTLALSD 238
++ V+AG HT AL++
Sbjct: 120 KVVQVSAGDSHTAALTE 136
>UNIPROTKB|F1RNC5 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GeneTree:ENSGT00700000104137
EMBL:FP016171 Ensembl:ENSSSCT00000019338 OMA:EPASHQQ Uniprot:F1RNC5
Length = 700
Score = 184 (69.8 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 41/142 (28%), Positives = 72/142 (50%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
G +K +ACG +A +TD G ++TFG G G G GS +D P V +LLG ++ VA
Sbjct: 398 GVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEALLGYEMVQVA 457
Query: 359 AGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
G H + +S++ +++A ++ P+L+ P + ++ V CG +
Sbjct: 458 CGASHVLALSTERELFAWGRGDGGRLGLGTRESHCCPQLVPMPPGQE--AQRVVCGIDSS 515
Query: 419 AVIADDGKVFCWGWNKYGQLGL 440
++ G+ G N++ +LGL
Sbjct: 516 MILTVPGQALACGSNRFNKLGL 537
Score = 125 (49.1 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 50/197 (25%), Positives = 82/197 (41%)
Query: 298 PGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG--STDDELSPN-----CVS-SL 349
PG + + CG S ++T G L G + + G S +E +P+ V+ +
Sbjct: 501 PGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPHQQVEEAVTFTP 560
Query: 350 LG---IQIE---GVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSL 403
LG + E V G H++ +++ GD Y + P + L
Sbjct: 561 LGSAPLDQEPLLSVDLGPAHSLLLTASGDCYTFGSNQHGQLGTNARRVSRAPCRVQG--L 618
Query: 404 ENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVP---R 460
+ + +V+CG T I +G+VF WG G+LG D D +P V ++ P
Sbjct: 619 QGIKISTVACGDAFTVAIGAEGEVFSWGKGARGRLGRKDE-DAGLPRPVQLDETHPYTVT 677
Query: 461 NVACGWWHTLLLAVPPT 477
+V+C +TLL P T
Sbjct: 678 SVSCCHGNTLLAVRPVT 694
Score = 124 (48.7 bits), Expect = 0.00021, P = 0.00021
Identities = 45/179 (25%), Positives = 73/179 (40%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQG---STDDELSPNCVSSLL----GIQIEGV 357
+A G A +T +G L+ + G G ++ P VS L G+ I+ V
Sbjct: 345 VAAGRTQKAGVTRSGRLILWEAPPLGAGGGALLPGAIEQPQPQFVSRFLEGQSGVTIKHV 404
Query: 358 AAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARH 417
A G T C++ G + + P +++A L V+CGA H
Sbjct: 405 ACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEA--LLGYEMVQVACGASH 462
Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE-GCVPRNVACGWWHTLLLAVP 475
++ + ++F WG G+LGLG P V + G + V CG +++L VP
Sbjct: 463 VLALSTERELFAWGRGDGGRLGLGTRESHCCPQLVPMPPGQEAQRVVCGIDSSMILTVP 521
Score = 68 (29.0 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 30/108 (27%), Positives = 48/108 (44%)
Query: 20 LPGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCG--FAMAISDSRKLITWGSTDD--L 75
LPGA+ Q P V R G + + CG F ++D ++T+GS + L
Sbjct: 377 LPGAIEQPQP---QFVSRF--LEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCL 431
Query: 76 GQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
G + I E L E +V+ A G +H +A++ E++ WG
Sbjct: 432 GHGSLNDISQPTIVEAL-LGYE--MVQVACGASHVLALSTERELFAWG 476
Score = 56 (24.8 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 18/56 (32%), Positives = 22/56 (39%)
Query: 86 GEIPEPFPLPT-EASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTG 140
G + P LP +V+ AAG VT G + W E P G G L G
Sbjct: 327 GGLSAPLRLPMLNTEVVQVAAGRTQKAGVTRSGRLILW---EAPPLGAGGGALLPG 379
Score = 47 (21.6 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 13/34 (38%), Positives = 16/34 (47%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS 237
G N + P +V G + VA G H LALS
Sbjct: 434 GSLNDISQPTIVEALLGYEMVQVACGASHVLALS 467
>TAIR|locus:2009739 [details] [associations]
symbol:AT1G65920 species:3702 "Arabidopsis thaliana"
[GO:0005543 "phospholipid binding" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=ISM] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005773 "vacuole" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR000306
InterPro:IPR001849 Pfam:PF01363 SMART:SM00064 SMART:SM00233
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0005773 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0046872 EMBL:AC009513
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184 InterPro:IPR013591
Pfam:PF08381 PROSITE:PS51514 HSSP:Q15075 HOGENOM:HOG000240974
IPI:IPI00526779 PIR:E96683 RefSeq:NP_176767.1 UniGene:At.35824
ProteinModelPortal:Q9SRZ7 SMR:Q9SRZ7 PaxDb:Q9SRZ7 PRIDE:Q9SRZ7
EnsemblPlants:AT1G65920.1 GeneID:842904 KEGG:ath:AT1G65920
TAIR:At1g65920 InParanoid:Q9SRZ7 OMA:AQADSWF PhylomeDB:Q9SRZ7
ProtClustDB:CLSN2679687 Genevestigator:Q9SRZ7 Uniprot:Q9SRZ7
Length = 1006
Score = 184 (69.8 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 60/208 (28%), Positives = 90/208 (43%)
Query: 274 SYGKDRSAALSRGSVNSEGPGFRVPG-NYVK--GIACGGRHSAVITDA------------ 318
+YG L GS+ S V +K ++CG H+A I +
Sbjct: 418 TYGSGTFGVLGHGSLESVTKPKEVESLRRMKVISVSCGPWHTAAIVETANDRKFYNAKSC 477
Query: 319 GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXX 378
G L T+G G G+ G + +L P CV+ L+ V+ G T+ +S G VY
Sbjct: 478 GKLFTWGDGDKGRLGHADSKRKLVPTCVTELIDHDFIKVSCGWTLTVALSISGTVYTMGS 537
Query: 379 XXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
+ +++ +L +L K ++ G+ H AV+ G V+ WG GQL
Sbjct: 538 SIHGQLGCPRAKDKSVNVVLG--NLTRQFVKDIASGSHHVAVLTSFGNVYTWGKGMNGQL 595
Query: 439 GLGDVIDRNIPSQVTIEGC-VPRNVACG 465
GLGDV DRN P V G + ++ACG
Sbjct: 596 GLGDVRDRNSPVLVEPLGDRLVESIACG 623
Score = 184 (69.8 bits), Expect = 6.4e-12, Sum P(2) = 6.4e-12
Identities = 57/192 (29%), Positives = 92/192 (47%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG--IQIEGVAA 359
V+ +AC + +T++G L + WG+ G + S L+ +S +LG + + VA
Sbjct: 346 VRSVACSDHQTCAVTESGEL--YLWGIDGGTIEQSGSQFLTRK-ISDVLGGSLTVLSVAC 402
Query: 360 GLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
G WHT ++S G ++ ++ T P+ + SL + SVSCG HTA
Sbjct: 403 GAWHTAIVTSSGQLFTYGSGTFGVLGHGSLESVTKPK--EVESLRRMKVISVSCGPWHTA 460
Query: 420 VI---ADD---------GKVFCWGWNKYGQLGLGDVIDRNIPSQVT--IEGCVPRNVACG 465
I A+D GK+F WG G+LG D + +P+ VT I+ + V+CG
Sbjct: 461 AIVETANDRKFYNAKSCGKLFTWGDGDKGRLGHADSKRKLVPTCVTELIDHDFIK-VSCG 519
Query: 466 WWHTLLLAVPPT 477
W T+ L++ T
Sbjct: 520 WTLTVALSISGT 531
Score = 172 (65.6 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 46/169 (27%), Positives = 79/169 (46%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
V+ I+ G +H+A++T G + +G G G+ G D P V SL + + VA
Sbjct: 294 VQSISLGAKHAALVTRQGEVFCWGNGNSGKLGLKVNIDIDHPKRVESLEDVAVRSVACSD 353
Query: 362 WHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
T ++ G++Y ++ L R + ++ SV+CGA HTA++
Sbjct: 354 HQTCAVTESGELYLWGIDGGTIEQSG---SQFLTRKISDVLGGSLTVLSVACGAWHTAIV 410
Query: 422 ADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
G++F +G +G LG G + P +V ++ +V+CG WHT
Sbjct: 411 TSSGQLFTYGSGTFGVLGHGSLESVTKPKEVESLRRMKVISVSCGPWHT 459
Score = 168 (64.2 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 50/182 (27%), Positives = 84/182 (46%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
V +ACG H+A++T +G L T+G G +G G GS + P V SL +++ V+ G
Sbjct: 397 VLSVACGAWHTAIVTSSGQLFTYGSGTFGVLGHGSLESVTKPKEVESLRRMKVISVSCGP 456
Query: 362 WHTICI---SSDGDVYAXXXXXXXXXXXXXDQ-----AETLPRLLDAPSLENV-HSK-SV 411
WHT I ++D Y D+ A++ +L+ E + H V
Sbjct: 457 WHTAAIVETANDRKFYNAKSCGKLFTWGDGDKGRLGHADSKRKLVPTCVTELIDHDFIKV 516
Query: 412 SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTL 470
SCG T ++ G V+ G + +GQLG D+++ + + +++A G H
Sbjct: 517 SCGWTLTVALSISGTVYTMGSSIHGQLGCPRAKDKSVNVVLGNLTRQFVKDIASGSHHVA 576
Query: 471 LL 472
+L
Sbjct: 577 VL 578
Score = 136 (52.9 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 31/78 (39%), Positives = 51/78 (65%)
Query: 389 DQAETL-PRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
+Q + L P+LL++ ++ +V +S+S GA+H A++ G+VFCWG G+LGL ID +
Sbjct: 276 NQNDALSPKLLESATMFDV--QSISLGAKHAALVTRQGEVFCWGNGNSGKLGLKVNIDID 333
Query: 448 IPSQV-TIEGCVPRNVAC 464
P +V ++E R+VAC
Sbjct: 334 HPKRVESLEDVAVRSVAC 351
Score = 115 (45.5 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 29/72 (40%), Positives = 38/72 (52%)
Query: 301 YVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAG 360
+VK IA G H AV+T G + T+G G+ GQ G G D SP V L +E +A G
Sbjct: 564 FVKDIASGSHHVAVLTSFGNVYTWGKGMNGQLGLGDVRDRNSPVLVEPLGDRLVESIACG 623
Query: 361 LWHT--ICISSD 370
L T IC+ +
Sbjct: 624 LNLTAAICLHKE 635
Score = 76 (31.8 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 19/59 (32%), Positives = 26/59 (44%)
Query: 65 KLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
KL TWG D G+ K +P + +K + GW VA++ G VYT G
Sbjct: 479 KLFTWGDGDK-GRLGHADSKRKLVPTCVTELIDHDFIKVSCGWTLTVALSISGTVYTMG 536
Score = 60 (26.2 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 17/69 (24%), Positives = 34/69 (49%)
Query: 59 AISDSRKLITWG----STDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVT 114
A+++S +L WG + + G ++T K ++ L +++ A G H VT
Sbjct: 358 AVTESGELYLWGIDGGTIEQSGSQFLTR-KISDV-----LGGSLTVLSVACGAWHTAIVT 411
Query: 115 EGGEVYTWG 123
G+++T+G
Sbjct: 412 SSGQLFTYG 420
Score = 57 (25.1 bits), Expect = 6.4e-12, Sum P(2) = 6.4e-12
Identities = 24/115 (20%), Positives = 47/115 (40%)
Query: 14 VFMWGYLPGALP---QRSPILSPLVVRLPLTVGSAWRDV--CGGGCGFAMAISDSRKLIT 68
+ +WG + G + ++ LSP ++ + DV G A ++ ++
Sbjct: 261 IMIWGAITGLIDGSKNQNDALSPKLLE-----SATMFDVQSISLGAKHAALVTRQGEVFC 315
Query: 69 WGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
WG+ + G+ + + P+ + ++ A AVTE GE+Y WG
Sbjct: 316 WGNGNS-GKLGLKVNIDIDHPKRVESLEDVAVRSVACSDHQTCAVTESGELYLWG 369
>SGD|S000003065 [details] [associations]
symbol:SRM1 "Nucleotide exchange factor for Gsp1p"
species:4932 "Saccharomyces cerevisiae" [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0007067 "mitosis" evidence=IEA] [GO:0019236
"response to pheromone" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0004871 "signal transducer activity" evidence=IMP] [GO:0006810
"transport" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=ISM] [GO:0000054
"ribosomal subunit export from nucleus" evidence=IMP] [GO:0006407
"rRNA export from nucleus" evidence=IMP] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
SGD:S000003065 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016021
GO:GO:0051301 GO:GO:0007067 EMBL:BK006941 GO:GO:0000790
GO:GO:0004871 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0019236 GO:GO:0000054
GeneTree:ENSGT00700000104160 GO:GO:0006407 OMA:PFEAIWA
HOGENOM:HOG000170207 OrthoDB:EOG466ZVF EMBL:M27013 EMBL:Z72619
PIR:A32320 RefSeq:NP_011418.1 PDB:3OF7 PDBsum:3OF7
ProteinModelPortal:P21827 SMR:P21827 DIP:DIP-2315N IntAct:P21827
MINT:MINT-561451 STRING:P21827 PaxDb:P21827 PeptideAtlas:P21827
EnsemblFungi:YGL097W GeneID:852782 KEGG:sce:YGL097W CYGD:YGL097w
EvolutionaryTrace:P21827 NextBio:972265 Genevestigator:P21827
GermOnline:YGL097W Uniprot:P21827
Length = 482
Score = 156 (60.0 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 50/183 (27%), Positives = 81/183 (44%)
Query: 301 YVKGIACGGRHSAVITDAGALLTFGWGLYGQCG--QGSTDDEL--SPNCVSSLLGIQIEG 356
+VK IA G H +T L+++G +GQCG + D L P ++ + I
Sbjct: 275 HVKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPKRLALPDNVVIRS 334
Query: 357 VAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLP--------RLLDAPS-LENVH 407
+AAG H++ +S DGD+Y+ D R + P+ L NV
Sbjct: 335 IAAGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKLNNVP 394
Query: 408 S-KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVID-RNIPSQVTIEGCVPRN---V 462
KSV+ G+ H+ +A +G + WG+ + +GLG D +P+++ N V
Sbjct: 395 KFKSVAAGSHHSVAVAQNGIAYSWGFGETYAVGLGPFEDDTEVPTRIKNTATQDHNIILV 454
Query: 463 ACG 465
CG
Sbjct: 455 GCG 457
Score = 117 (46.2 bits), Expect = 7.8e-08, Sum P(2) = 7.8e-08
Identities = 45/187 (24%), Positives = 81/187 (43%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST---DDEL----SPNCVSSLLG 351
G+ V +A S + G + + WG + +C +G D++ +P V +
Sbjct: 164 GHKVVQLAATDNMSCALFSNGEV--YAWGTF-RCNEGILGFYQDKIKIQKTPWKVPTFSK 220
Query: 352 IQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSV 411
I +A G H + + +G V+A + L + LD H K +
Sbjct: 221 YNIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGRKVMERFRL-KTLDPRPFGLRHVKYI 279
Query: 412 SCGARHTAVIADDGKVFCWGWNKYGQLGLG-DVIDRNI---PSQVTI-EGCVPRNVACGW 466
+ G H + D K+ WG N++GQ G+ DV D + P ++ + + V R++A G
Sbjct: 280 ASGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPKRLALPDNVVIRSIAAGE 339
Query: 467 WHTLLLA 473
H+L+L+
Sbjct: 340 HHSLILS 346
Score = 81 (33.6 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 30/93 (32%), Positives = 41/93 (44%)
Query: 66 LITWG--STDDLGQSYVTSGKHGEIPE--PFPLPT-EASIVKAAAGWAHCVAVTEGGEVY 120
+ WG S +LG + K + P PF LP EA I+ A G H +A+ E V+
Sbjct: 48 IFCWGTGSMCELGLGPLAKNKEVKRPRLNPF-LPRDEAKIISFAVGGMHTLALDEESNVW 106
Query: 121 TWGWKECVPSGRVFGDLSTGTGLDKDVFERQSS 153
+WG + GR D S KD+ SS
Sbjct: 107 SWGCNDVGALGR---DTSNAKEQLKDMDADDSS 136
Score = 62 (26.9 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 20/59 (33%), Positives = 25/59 (42%)
Query: 71 STDDLGQSYVTSGKHGEIP-EPFPLPTEA-SIVKAAAGWAHCVAVTEGGEVYTWGWKEC 127
S D+ G +IP E FP E +V+ AA A+ GEVY WG C
Sbjct: 136 SDDEDGDLNELESTPAKIPRESFPPLAEGHKVVQLAATDNMSCALFSNGEVYAWGTFRC 194
Score = 58 (25.5 bits), Expect = 7.9e-10, Sum P(2) = 7.9e-10
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 91 PFPLPT--EASIVKAAAGWAHCVAVTEGGEVYTWG 123
P+ +PT + +IV+ A G H + + E G V+ WG
Sbjct: 212 PWKVPTFSKYNIVQLAPGKDHILFLDEEGMVFAWG 246
Score = 47 (21.6 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 222 RIATVAAGGRHTLALSD 238
+I + A GG HTLAL +
Sbjct: 85 KIISFAVGGMHTLALDE 101
>TAIR|locus:2090136 [details] [associations]
symbol:AT3G15430 "AT3G15430" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] [GO:0006486 "protein glycosylation" evidence=RCA]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 EMBL:AB022218 EMBL:AC024081 HSSP:P18754
EMBL:AY150379 IPI:IPI00535822 RefSeq:NP_566512.1 RefSeq:NP_974323.1
UniGene:At.24353 ProteinModelPortal:Q9LDU3 SMR:Q9LDU3 IntAct:Q9LDU3
EnsemblPlants:AT3G15430.1 EnsemblPlants:AT3G15430.2 GeneID:820782
KEGG:ath:AT3G15430 TAIR:At3g15430 InParanoid:Q9LDU3 OMA:GDNERAQ
PhylomeDB:Q9LDU3 ProtClustDB:CLSN2688406 Genevestigator:Q9LDU3
Uniprot:Q9LDU3
Length = 488
Score = 185 (70.2 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 54/195 (27%), Positives = 82/195 (42%)
Query: 286 GSVNSEGPGFR------VPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDD 339
G +++ P FR + G K +A G + ++ G T G +GQ G G T D
Sbjct: 196 GHLDTSRPIFRPKLVEALKGTPCKQVAAGLHFTVFLSREGHAYTCGSNTHGQLGHGDTLD 255
Query: 340 ELSPNCVSSLLGI-QIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLL 398
P V L I + +AAG + + ++ DG VY+ Q E PR++
Sbjct: 256 RPVPKVVEFLKTIGPVVQIAAGPSYVLAVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVI 315
Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ-VTIEGC 457
A + +H VS G H + +G+V+ WG G LG GD D+ P V + C
Sbjct: 316 QAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLNNC 375
Query: 458 VPRNVACGWWHTLLL 472
+ V T +L
Sbjct: 376 LAVQVCARKRKTFVL 390
Score = 161 (61.7 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 49/175 (28%), Positives = 81/175 (46%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLL--GIQIEGVAAGLW 362
IA G + +T G++ +FG G G G DEL P + + GI I V+AG
Sbjct: 274 IAAGPSYVLAVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDE 333
Query: 363 HTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIA 422
H + + S+G VY + + P++L +L N + V R T V+
Sbjct: 334 HAVALDSNGRVYTWGKGYCGALGHGDENDKITPQVL--VNLNNCLAVQVCARKRKTFVLV 391
Query: 423 DDGKVFCWGWNKYGQLGLGD--VIDRNIPSQVTIEGCVPRNVA---CGWWHTLLL 472
+ G ++ +GW +G LG D V D+ + +V +E P V+ G +HT+++
Sbjct: 392 EGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRV-LECLKPHRVSQVSTGLYHTIVV 445
Score = 122 (48.0 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 44/175 (25%), Positives = 72/175 (41%)
Query: 274 SYGKDRSAALSRGSVNSE-GP----GFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL 328
S+G + L G E P F+ G ++ ++ G H+ + G + T+G G
Sbjct: 292 SFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGY 351
Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXX 388
G G G +D+++P + +L V A T + G +Y
Sbjct: 352 CGALGHGDENDKITPQVLVNLNNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLGFP- 410
Query: 389 DQA---ETL-PRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG 439
D+ + L PR+L+ V VS G HT V+ G++F +G N+ QLG
Sbjct: 411 DRGVSDKVLRPRVLECLKPHRV--SQVSTGLYHTIVVTQRGRIFGFGDNERAQLG 463
Score = 49 (22.3 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 89 PEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
P FP P + + V A H V + G+V T G
Sbjct: 156 PIEFPFPAQVAQVSATQN--HSAFVLQSGQVLTCG 188
>UNIPROTKB|P23800 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:10036 "Mesocricetus auratus" [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0007059
"chromosome segregation" evidence=ISS] [GO:0031492 "nucleosomal DNA
binding" evidence=ISS] [GO:0051225 "spindle assembly" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0007059 GO:GO:0051301 GO:GO:0007067 GO:GO:0051225
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0031492 HOVERGEN:HBG017712 EMBL:M33579 PIR:A34726
ProteinModelPortal:P23800 SMR:P23800 Uniprot:P23800
Length = 421
Score = 158 (60.7 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 50/167 (29%), Positives = 82/167 (49%)
Query: 311 HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
H + T+ G +LT G G GQ G G + E + LL ++ A G+ HT+C++
Sbjct: 27 HRSHKTEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQDVVQAEAGGM-HTVCLNQS 85
Query: 371 GDVYAXX--XXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVF 428
G VY+ + +E +P ++ E V VS G HTA + +DG+VF
Sbjct: 86 GQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQ--EKV--VQVSAGDSHTAALTEDGRVF 141
Query: 429 CWGW--NKYGQLGLGDVIDRN-IPSQVTIEGCVPRNVACGWWHTLLL 472
WG + G +GL + + ++ +P QV ++ V + VA G H ++L
Sbjct: 142 LWGSFRDNNGVIGLLEPMKKSMVPVQVQLDMPVVK-VASGNDHLVML 187
Score = 153 (58.9 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 52/172 (30%), Positives = 73/172 (42%)
Query: 307 CGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE--GVAAGLWHT 364
CG + I+ G + FG Y Q G T P ++S G + G HT
Sbjct: 247 CGAYLTFAISREGHVYGFGLSNYHQLGTPGTASCFIPQNLTSFKNSTKSWVGFSGGQHHT 306
Query: 365 ICISSDGDVYAXXXXXXXXXXXXXDQAE-TLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
IC+ S+G Y+ E ++P L+ L V SV+CGA ++
Sbjct: 307 ICMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISR--LPVV--SSVACGASVGYAVSK 362
Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVT---IEGCVPRNVACGWWHTLLL 472
DG+VF WG QLG G D P ++T +E V V+ G HT+LL
Sbjct: 363 DGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLL 414
Score = 108 (43.1 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 33/118 (27%), Positives = 50/118 (42%)
Query: 308 GGRHSAVITDA-GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC 366
GG+H + D+ G + G YG+ G G +E S + S L + + VA G
Sbjct: 301 GGQHHTICMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPV-VSSVACGASVGYA 359
Query: 367 ISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
+S DG V+A D+ P + LEN +VS G +HT ++ D
Sbjct: 360 VSKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLLVKD 417
Score = 82 (33.9 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 25/100 (25%), Positives = 46/100 (46%)
Query: 24 LPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSG 83
L ++ P L PL+ + VC ++ S ++ ++G D+ TS
Sbjct: 55 LERKKPALVPLLQDVVQAEAGGMHTVC---------LNQSGQVYSFGCNDEGALGRDTSV 105
Query: 84 KHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
+ E+ P + + +V+ +AG +H A+TE G V+ WG
Sbjct: 106 EGSEMV-PGKVELQEKVVQVSAGDSHTAALTEDGRVFLWG 144
Score = 79 (32.9 bits), Expect = 7.1e-12, Sum P(2) = 7.1e-12
Identities = 28/98 (28%), Positives = 45/98 (45%)
Query: 53 GCGFAMAISDSRKLITWGS-TDDLGQ-SYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
G A+++ ++ WGS D+ G + K +P L + +VK A+G H
Sbjct: 127 GDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQL--DMPVVKVASGNDHL 184
Query: 111 VAVTEGGEVYTWGWKECVPSGRV---FGDLSTGTGLDK 145
V +T G++YT G E GRV F + GL++
Sbjct: 185 VMLTTDGDLYTLGCGEQGQLGRVPELFANRGGRQGLER 222
Score = 68 (29.0 bits), Expect = 4.0e-11, Sum P(3) = 4.0e-11
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 87 EIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLS 138
E +P +P +V+A AG H V + + G+VY++G C G + D S
Sbjct: 56 ERKKPALVPLLQDVVQAEAGGMHTVCLNQSGQVYSFG---CNDEGALGRDTS 104
Score = 40 (19.1 bits), Expect = 4.0e-11, Sum P(3) = 4.0e-11
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 222 RIATVAAGGRHTLALSD 238
++ V+AG HT AL++
Sbjct: 120 KVVQVSAGDSHTAALTE 136
Score = 38 (18.4 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 11/26 (42%), Positives = 13/26 (50%)
Query: 212 PCLVTLNPGVRIATVAAGGRHTLALS 237
P LV L V AGG HT+ L+
Sbjct: 60 PALVPLLQDV--VQAEAGGMHTVCLN 83
>ZFIN|ZDB-GENE-070912-423 [details] [associations]
symbol:rpgra "retinitis pigmentosa GTPase regulator
a" species:7955 "Danio rerio" [GO:0072001 "renal system
development" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-070912-423 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0072001 GeneTree:ENSGT00700000104160 EMBL:BX571713
IPI:IPI00955233 RefSeq:XP_003199276.1 Ensembl:ENSDART00000079095
GeneID:571327 KEGG:dre:571327 CTD:571327 NextBio:20890513
Bgee:F1QV77 Uniprot:F1QV77
Length = 1698
Score = 199 (75.1 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 51/169 (30%), Positives = 80/169 (47%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
I+CG HSA +T+ G L FG GQ G P CV L G + + VA G HT
Sbjct: 39 ISCGQSHSAFVTEQGRLFVFGDNNRGQLGLQIKGPVTKPVCVKVLKGERAQSVACGTDHT 98
Query: 365 ICISSDGDVYAXXXXXXXXXXXXX-DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
+ +S G++ A + + + RL P + K +S G +A + +
Sbjct: 99 LVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRL--RPFCDYAPIKLLSAGDHTSAALTE 156
Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
DG++F WG N GQLG G+ +P ++ + + V+CG+ H+ L+
Sbjct: 157 DGRLFLWGDNSAGQLGFGNDSHALLPKELNMGQSI-HWVSCGYRHSALV 204
Score = 173 (66.0 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 52/177 (29%), Positives = 84/177 (47%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ-IEGV 357
G + +ACG H+ V T G +L G GQ G G +D +S + I+ +
Sbjct: 85 GERAQSVACGTDHTLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRLRPFCDYAPIKLL 144
Query: 358 AAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARH 417
+AG + ++ DG ++ D LP+ L+ +++H VSCG RH
Sbjct: 145 SAGDHTSAALTEDGRLFLWGDNSAGQLGFGNDSHALLPKELNMG--QSIHW--VSCGYRH 200
Query: 418 TAVIADDGKVFCWGWNKYGQLGLG--DVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
+A++ D G V+ +G + G+LGL + + + P +V V + VACG HTL L
Sbjct: 201 SALVTDSGDVYSFGESADGRLGLSAHQLANHSYPQRVESLHSVLQ-VACGGKHTLAL 256
Score = 166 (63.5 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 56/189 (29%), Positives = 89/189 (47%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD--DELSPNCVSSLLGIQIEG 356
G + ++CG RHSA++TD+G + +FG G+ G + + P V SL + ++
Sbjct: 188 GQSIHWVSCGYRHSALVTDSGDVYSFGESADGRLGLSAHQLANHSYPQRVESLHSV-LQ- 245
Query: 357 VAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKS----VS 412
VA G HT+ ++ D ++Y TL + D+P K V+
Sbjct: 246 VACGGKHTLALTED-ELYCFGGGEFGQLGLG-----TLVFVADSPVAVGHFRKGRVTHVT 299
Query: 413 CGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVP------RNVACGW 466
CG +H+A+I D G ++ +G ++G+LG GD N +Q T C VACG
Sbjct: 300 CGEQHSALITDSGLLYTFGDGRHGKLGHGD---ENFTNQFTPTVCQRFFEYSVMTVACGS 356
Query: 467 WHTLLLAVP 475
H L+ A P
Sbjct: 357 SHMLVFARP 365
Score = 57 (25.1 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 24/98 (24%), Positives = 40/98 (40%)
Query: 27 RSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTD-DLGQSYVTSGKH 85
+ P+ P+ V++ G + V G ++ S L G++D LG +
Sbjct: 71 KGPVTKPVCVKV--LKGERAQSVACGTDHTLVSTSQGEILAAGGNSDGQLGLGHCNDSIS 128
Query: 86 GEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
+ PF A I +AG A+TE G ++ WG
Sbjct: 129 FQRLRPFC--DYAPIKLLSAGDHTSAALTEDGRLFLWG 164
Score = 45 (20.9 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 17/59 (28%), Positives = 27/59 (45%)
Query: 70 GSTD--DLGQSYVTSGKH---GEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
G T+ D G + T GK +P L ++ V + G +H VTE G ++ +G
Sbjct: 3 GETEIPDTGAVF-TFGKSKIANNVPSRLWLKSDIP-VHISCGQSHSAFVTEQGRLFVFG 59
Score = 40 (19.1 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 212 PCLVTLNPGVRIATVAAGGRHTL 234
P V + G R +VA G HTL
Sbjct: 77 PVCVKVLKGERAQSVACGTDHTL 99
>UNIPROTKB|Q9P258 [details] [associations]
symbol:RCC2 "Protein RCC2" species:9606 "Homo sapiens"
[GO:0005874 "microtubule" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0000775 "chromosome, centromeric region"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005819
"spindle" evidence=IEA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 Reactome:REACT_115566 Reactome:REACT_21300
GO:GO:0000775 GO:GO:0005730 GO:GO:0051301 GO:GO:0005819
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005874
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GO:GO:0000236 CTD:55920 HOGENOM:HOG000232061
HOVERGEN:HBG080538 OMA:FGENKLG OrthoDB:EOG4DNF4B EMBL:AJ421269
EMBL:AB040903 EMBL:BC004933 EMBL:BC042141 EMBL:BC053908
EMBL:AL359612 IPI:IPI00465044 PIR:T50630 RefSeq:NP_001129676.1
RefSeq:NP_061185.1 UniGene:Hs.380857 ProteinModelPortal:Q9P258
SMR:Q9P258 IntAct:Q9P258 STRING:Q9P258 PhosphoSite:Q9P258
DMDM:71152033 SWISS-2DPAGE:Q9P258 PaxDb:Q9P258 PeptideAtlas:Q9P258
PRIDE:Q9P258 Ensembl:ENST00000375433 Ensembl:ENST00000375436
GeneID:55920 KEGG:hsa:55920 UCSC:uc001bal.3 GeneCards:GC01M017733
HGNC:HGNC:30297 MIM:609587 neXtProt:NX_Q9P258 PharmGKB:PA142671091
InParanoid:Q9P258 GenomeRNAi:55920 NextBio:61323 Bgee:Q9P258
CleanEx:HS_RCC2 Genevestigator:Q9P258 GermOnline:ENSG00000179051
Uniprot:Q9P258
Length = 522
Score = 152 (58.6 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 47/161 (29%), Positives = 73/161 (45%)
Query: 319 GALLTFG---WGLYG-------QCGQGSTDDEL-SPNCVSSLLGIQIEGVAAGLW--HTI 365
G LL FG W L G Q + L P+ L G+++ V +G H++
Sbjct: 104 GQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLAGVRVRTVVSGSCAAHSL 163
Query: 366 CISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDG 425
I+++G +++ + PRL++ S E + S +CG HT + + G
Sbjct: 164 LITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVI--VSAACGRNHTLALTETG 221
Query: 426 KVFCWGWNKYGQLGLGDVIDR-NIPSQVTIEGCVPRNVACG 465
VF +G NK GQLGLG+ D P+Q+ G +ACG
Sbjct: 222 SVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPITKMACG 262
Score = 150 (57.9 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 46/189 (24%), Positives = 86/189 (45%)
Query: 291 EGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVS--S 348
+G VP V+ +ACG H+ V+ + ++G+G YG+ G DE+ P V
Sbjct: 321 DGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD 380
Query: 349 LLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHS 408
G + AG + +S G ++ ++ P+ + L
Sbjct: 381 FPGRGASQIYAGYTCSFAVSEVGGLFFWGATNTSR------ESTMYPKAVQ--DLCGWRI 432
Query: 409 KSVSCGARHTAVIADDGKVFCWGWNK-YGQLGLGDVIDRNIPS--QV-TIEGCVPRNVAC 464
+S++CG + + ++A D WG + +G+LG GD ++ + +V T++G VA
Sbjct: 433 RSLACG-KSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAM 491
Query: 465 GWWHTLLLA 473
G+ H+L++A
Sbjct: 492 GYSHSLVIA 500
Score = 132 (51.5 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 51/174 (29%), Positives = 75/174 (43%)
Query: 294 GFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ 353
G RV V G +C HS +IT G L ++G GQ G G T +P + L
Sbjct: 147 GVRVR-TVVSG-SCAA-HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEV 203
Query: 354 IEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHS-KSVS 412
I A G HT+ ++ G V+A +Q + +P A + N ++
Sbjct: 204 IVSAACGRNHTLALTETGSVFAFGENKMGQLGLG-NQTDAVPS--PAQIMYNGQPITKMA 260
Query: 413 CGARHTAVIADDGKVFCWGWNKYGQLGL---GDVIDRNIPSQVTIEGCVPRNVA 463
CGA + ++ G ++ +G +YGQLG G I R + E VPR VA
Sbjct: 261 CGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCE-LVPRRVA 313
Score = 88 (36.0 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 26/78 (33%), Positives = 36/78 (46%)
Query: 47 RDVCGGGCG-FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAA 105
R V G C ++ I+ KL +WG + GQ K E P + IV AA
Sbjct: 151 RTVVSGSCAAHSLLITTEGKLWSWGRNEK-GQLGHGDTKRVEAPRLIEGLSHEVIVSAAC 209
Query: 106 GWAHCVAVTEGGEVYTWG 123
G H +A+TE G V+ +G
Sbjct: 210 GRNHTLALTETGSVFAFG 227
Score = 82 (33.9 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 31/131 (23%), Positives = 53/131 (40%)
Query: 295 FRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQI 354
F PG I G S +++ G L F WG S + + P V L G +I
Sbjct: 379 FDFPGRGASQIYAGYTCSFAVSEVGGL--FFWGATNT----SRESTMYPKAVQDLCGWRI 432
Query: 355 EGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXD-QAETLPRLLDAPSLENVHSKSVSC 413
+A G +I +++D + D + ++ + +L+ + S+ V+
Sbjct: 433 RSLACGK-SSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAM 491
Query: 414 GARHTAVIADD 424
G H+ VIA D
Sbjct: 492 GYSHSLVIARD 502
Score = 46 (21.3 bits), Expect = 2.7e-08, Sum P(3) = 2.7e-08
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 108 AHCVAVTEGGEVYTWGWKE 126
AH + +T G++++WG E
Sbjct: 160 AHSLLITTEGKLWSWGRNE 178
Score = 44 (20.5 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 219 PGVRIATVAAGGRHTLAL 236
P V + VA G HTL L
Sbjct: 328 PNVVVRDVACGANHTLVL 345
Score = 42 (19.8 bits), Expect = 2.7e-08, Sum P(3) = 2.7e-08
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 204 GDENLSAFPCLVT-LNPGVRIATVAAGGRHTLALSD 238
GD P L+ L+ V I + A G HTLAL++
Sbjct: 185 GDTKRVEAPRLIEGLSHEV-IVSAACGRNHTLALTE 219
>MGI|MGI:1919784 [details] [associations]
symbol:Rcc2 "regulator of chromosome condensation 2"
species:10090 "Mus musculus" [GO:0000775 "chromosome, centromeric
region" evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0051301 "cell division"
evidence=IEA] MGI:MGI:1919784 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0000775 GO:GO:0005730 GO:GO:0051301
GO:GO:0007067 GO:GO:0005819 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0005874 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 EMBL:AL954710 eggNOG:COG5184
GeneTree:ENSGT00700000104160 CTD:55920 HOGENOM:HOG000232061
HOVERGEN:HBG080538 OMA:FGENKLG OrthoDB:EOG4DNF4B EMBL:AK076040
EMBL:BC086666 EMBL:AK129370 IPI:IPI00222509 RefSeq:NP_776292.1
UniGene:Mm.253 ProteinModelPortal:Q8BK67 SMR:Q8BK67 STRING:Q8BK67
PhosphoSite:Q8BK67 PaxDb:Q8BK67 PRIDE:Q8BK67
Ensembl:ENSMUST00000038893 Ensembl:ENSMUST00000071169 GeneID:108911
KEGG:mmu:108911 UCSC:uc008vna.2 InParanoid:A2AWQ3 ChiTaRS:RCC2
NextBio:361459 Bgee:Q8BK67 CleanEx:MM_RCC2 Genevestigator:Q8BK67
GermOnline:ENSMUSG00000040945 Uniprot:Q8BK67
Length = 520
Score = 156 (60.0 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 49/168 (29%), Positives = 77/168 (45%)
Query: 319 GALLTFG---WGLYG-------QCGQGSTDDEL-SPNCVSSLLGIQIEGVAAGLW--HTI 365
G LL FG W L G Q + L P+ L G+++ V +G H++
Sbjct: 102 GQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHSL 161
Query: 366 CISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDG 425
I+++G +++ + PRL++A S E + +CG HT + D G
Sbjct: 162 LITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAI--VLAACGRNHTLALTDTG 219
Query: 426 KVFCWGWNKYGQLGLGDVIDR-NIPSQVTIEGCVPRNVACGWWHTLLL 472
VF +G NK GQLGLG+ D P+Q+ G +ACG ++L+
Sbjct: 220 SVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPITKMACGAEFSMLM 267
Score = 149 (57.5 bits), Expect = 4.0e-12, Sum P(2) = 4.0e-12
Identities = 46/189 (24%), Positives = 86/189 (45%)
Query: 291 EGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVS--S 348
+G VP V+ +ACG H+ V+ + ++G+G YG+ G DE+ P V
Sbjct: 319 DGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD 378
Query: 349 LLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHS 408
G + AG + +S G ++ ++ P+ + L
Sbjct: 379 FPGRGATQIYAGYTCSFAVSEVGGLFFWGATNTSR------ESTMYPKAVQ--DLCGWRI 430
Query: 409 KSVSCGARHTAVIADDGKVFCWGWNK-YGQLGLGDVIDRNIPS--QV-TIEGCVPRNVAC 464
+S++CG + + ++A D WG + +G+LG GD ++ + +V T++G VA
Sbjct: 431 RSLACG-KSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAM 489
Query: 465 GWWHTLLLA 473
G+ H+L++A
Sbjct: 490 GYSHSLVIA 498
Score = 128 (50.1 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 51/174 (29%), Positives = 76/174 (43%)
Query: 294 GFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ 353
G RV V G +C HS +IT G L ++G GQ G G T +P + +L
Sbjct: 145 GVRVR-TVVSG-SCAA-HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEA 201
Query: 354 IEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHS-KSVS 412
I A G HT+ ++ G V+A +Q + +P A + N ++
Sbjct: 202 IVLAACGRNHTLALTDTGSVFAFGENKMGQLGLG-NQTDAVPS--PAQIMYNGQPITKMA 258
Query: 413 CGARHTAVIADDGKVFCWGWNKYGQLGL---GDVIDRNIPSQVTIEGCVPRNVA 463
CGA + ++ G ++ +G +YGQLG G I R + E VPR VA
Sbjct: 259 CGAEFSMLMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCE-LVPRRVA 311
Score = 89 (36.4 bits), Expect = 4.0e-12, Sum P(2) = 4.0e-12
Identities = 25/78 (32%), Positives = 37/78 (47%)
Query: 47 RDVCGGGCG-FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAA 105
R V G C ++ I+ KL +WG + GQ K E P + +IV AA
Sbjct: 149 RTVVSGSCAAHSLLITTEGKLWSWGRNEK-GQLGHGDTKRVEAPRLIEALSHEAIVLAAC 207
Query: 106 GWAHCVAVTEGGEVYTWG 123
G H +A+T+ G V+ +G
Sbjct: 208 GRNHTLALTDTGSVFAFG 225
Score = 81 (33.6 bits), Expect = 3.2e-05, Sum P(3) = 3.2e-05
Identities = 31/131 (23%), Positives = 53/131 (40%)
Query: 295 FRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQI 354
F PG I G S +++ G L F WG S + + P V L G +I
Sbjct: 377 FDFPGRGATQIYAGYTCSFAVSEVGGL--FFWGATNT----SRESTMYPKAVQDLCGWRI 430
Query: 355 EGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXD-QAETLPRLLDAPSLENVHSKSVSC 413
+A G +I +++D + D + ++ + +L+ + S+ V+
Sbjct: 431 RSLACGK-SSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAM 489
Query: 414 GARHTAVIADD 424
G H+ VIA D
Sbjct: 490 GYSHSLVIARD 500
Score = 47 (21.6 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 13/35 (37%), Positives = 15/35 (42%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSD 238
GD P L+ I A G HTLAL+D
Sbjct: 183 GDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTD 217
Score = 46 (21.3 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 108 AHCVAVTEGGEVYTWGWKE 126
AH + +T G++++WG E
Sbjct: 158 AHSLLITTEGKLWSWGRNE 176
Score = 44 (20.5 bits), Expect = 3.2e-05, Sum P(3) = 3.2e-05
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 219 PGVRIATVAAGGRHTLAL 236
P V + VA G HTL L
Sbjct: 326 PNVVVRDVACGANHTLVL 343
>UNIPROTKB|I3L8I2 [details] [associations]
symbol:LOC100737658 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 Ensembl:ENSSSCT00000025619
Uniprot:I3L8I2
Length = 676
Score = 195 (73.7 bits), Expect = 4.2e-12, Sum P(2) = 4.2e-12
Identities = 52/190 (27%), Positives = 89/190 (46%)
Query: 257 SRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF--RV----PGNYVKGIACGGR 310
+R + +P P+P G A L G++ P F R G +K +ACG
Sbjct: 334 TRCLPLPAPSPVPSQAPPLGAGGGALLP-GAIEQPQPQFVSRFLEGQSGVTIKHVACGDL 392
Query: 311 HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
+A +TD G ++TFG G G G GS +D P V +LLG ++ VA G H + +S++
Sbjct: 393 FTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEALLGYEMVQVACGASHVLALSTE 452
Query: 371 GDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
+++A ++ P+L+ P + ++ V CG + ++ G+
Sbjct: 453 RELFAWGRGDGGRLGLGTRESHCCPQLVPMPPGQE--AQRVVCGIDSSMILTVPGQALAC 510
Query: 431 GWNKYGQLGL 440
G N++ +LGL
Sbjct: 511 GSNRFNKLGL 520
Score = 109 (43.4 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 48/188 (25%), Positives = 75/188 (39%)
Query: 298 PGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG--STDDELSPNC-VSSLLGIQI 354
PG + + CG S ++T G L G + + G S +E +P+ V +
Sbjct: 484 PGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPHQQVEEAVTFTP 543
Query: 355 EGVAAGLWHTICISSD-GDVY-AXXXXXXXXXXXXXDQAETLPRL-LDAPSLENVHSKSV 411
G +A L +S D G + A A + R L+ + +V
Sbjct: 544 LG-SAPLDQEPLLSVDLGTAHSAAVTXASGDCYTFGSNARRVSRAPCRVQGLQGIKISTV 602
Query: 412 SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVP---RNVACGWWH 468
+CG T I +G+VF WG G+LG D D +P V ++ P +V+C +
Sbjct: 603 ACGDAFTVAIGAEGEVFSWGKGARGRLGRKDE-DAGLPRPVQLDETHPYTVTSVSCCHGN 661
Query: 469 TLLLAVPP 476
TLL P
Sbjct: 662 TLLAVRRP 669
Score = 68 (29.0 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 30/108 (27%), Positives = 48/108 (44%)
Query: 20 LPGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCG--FAMAISDSRKLITWGSTDD--L 75
LPGA+ Q P V R G + + CG F ++D ++T+GS + L
Sbjct: 360 LPGAIEQPQP---QFVSRF--LEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCL 414
Query: 76 GQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
G + I E L E +V+ A G +H +A++ E++ WG
Sbjct: 415 GHGSLNDISQPTIVEAL-LGYE--MVQVACGASHVLALSTERELFAWG 459
Score = 42 (19.8 bits), Expect = 4.2e-12, Sum P(2) = 4.2e-12
Identities = 23/87 (26%), Positives = 34/87 (39%)
Query: 21 PGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGC-GFAMAISDSRKLITWGSTDDLGQSY 79
P LP R+ PL GS C G M ++ ++ G T G
Sbjct: 279 PPRLPHRAE--KSAAAGPPLVPGSTGSRTSSARCRGLPMLNTEVVQVAA-GRTQKAG--- 332
Query: 80 VTSGKHGEIPEPFPLPTEASIVKAAAG 106
VT + +P P P+P++A + A G
Sbjct: 333 VT--RCLPLPAPSPVPSQAPPLGAGGG 357
>UNIPROTKB|E1BIS5 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104312 CTD:81554 OMA:MVTLAKS
EMBL:DAAA02058190 IPI:IPI00705939 RefSeq:NP_001179275.1
UniGene:Bt.1520 Ensembl:ENSBTAT00000015608 GeneID:513273
KEGG:bta:513273 NextBio:20870790 Uniprot:E1BIS5
Length = 464
Score = 153 (58.9 bits), Expect = 5.0e-12, Sum P(2) = 5.0e-12
Identities = 58/209 (27%), Positives = 91/209 (43%)
Query: 275 YGKDRSAALSRGSVNSEGP--GFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YG 330
+G D L ++ S G + G V +A G ++ G L FGWG Y
Sbjct: 256 WGADGQTGLGHYNITSTPTKLGGDLAGVNVVQVATYGDCCLAVSADGGL--FGWGNSEYL 313
Query: 331 QCGQGSTDDELS-PNCVSSLLGI-QIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXX 388
Q + +++ P C+ G+ Q++ A G ++ +G V+
Sbjct: 314 QLASVTDSTQVNVPRCLP-FSGVGQVKQAACGGTGCAVLNGEGHVFVWGYGILGKGPNLL 372
Query: 389 DQA--ETLPRLLDAPSLEN--VHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVI 444
+ A E +P L S N V + CG H A + + G++F WG N G LG+G +
Sbjct: 373 ETALPEMIPPTLFGLSEFNPGVQVSRIRCGLSHFAALTNRGELFVWGKNIRGCLGIGRLE 432
Query: 445 DRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
D+ P +VT+ G P +VACG H + LA
Sbjct: 433 DQYFPWRVTMPG-EPMDVACGVDHMVTLA 460
Score = 140 (54.3 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 43/167 (25%), Positives = 73/167 (43%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL--SPNCVSSLLGI--QIEGVAAG 360
++CG HS V+TD + + G YGQCG+ ++E+ + V + Q+ VA G
Sbjct: 179 VSCGRAHSLVLTDGEGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQDFDGQVVQVACG 238
Query: 361 LWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
H++ ++ G+VY+ + P L L V+ V+
Sbjct: 239 QDHSLFLTDQGEVYSCGWGADGQTGLGHYNITSTPTKLGG-DLAGVNVVQVATYGDCCLA 297
Query: 421 IADDGKVFCWGWNKYGQLG-LGDVIDRNIPSQVTIEGCVP-RNVACG 465
++ DG +F WG ++Y QL + D N+P + G + ACG
Sbjct: 298 VSADGGLFGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGQVKQAACG 344
Score = 82 (33.9 bits), Expect = 5.0e-12, Sum P(2) = 5.0e-12
Identities = 27/100 (27%), Positives = 45/100 (45%)
Query: 30 ILSPLVVRLPLTVGSAWRDVCGGGCGFA--MAISDSRKLITWGSTD--DLGQSYVTSGKH 85
+L P V LPL R V CG A + ++D + + G+ G+ V + +
Sbjct: 158 VLEPSPVPLPLDRPQETR-VLQVSCGRAHSLVLTDGEGVFSMGNNSYGQCGRKVVENEIY 216
Query: 86 GEIPEPFPLPT-EASIVKAAAGWAHCVAVTEGGEVYTWGW 124
E + + +V+ A G H + +T+ GEVY+ GW
Sbjct: 217 SESHRVHRMQDFDGQVVQVACGQDHSLFLTDQGEVYSCGW 256
Score = 74 (31.1 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 33/118 (27%), Positives = 54/118 (45%)
Query: 22 GALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSR-KLIT--WG---STDD- 74
G+ P+R + P+ RL L + + CG+ + S+ K IT WG + D
Sbjct: 89 GSRPRRR--IQPVPYRLELD-----QKISSAACGYGFTLLSSKTKDITKVWGMGLNKDSQ 141
Query: 75 LG----QSYVTSGKHGEI-PEPFPLPT----EASIVKAAAGWAHCVAVTEGGEVYTWG 123
LG + T G + P P PLP E +++ + G AH + +T+G V++ G
Sbjct: 142 LGFHRSRKDKTRGYEYVLEPSPVPLPLDRPQETRVLQVSCGRAHSLVLTDGEGVFSMG 199
Score = 38 (18.4 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 222 RIATVAAGGRHTLALSD 238
R+ V+ G H+L L+D
Sbjct: 175 RVLQVSCGRAHSLVLTD 191
>UNIPROTKB|E1B827 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072372 "primary cilium" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 OMA:EREVFAW EMBL:DAAA02048605
EMBL:DAAA02048606 IPI:IPI00700790 Ensembl:ENSBTAT00000020643
Uniprot:E1B827
Length = 698
Score = 180 (68.4 bits), Expect = 6.5e-12, Sum P(2) = 6.5e-12
Identities = 46/165 (27%), Positives = 80/165 (48%)
Query: 282 ALSRGSVNSEGPGF--RV----PGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG 335
AL G+V + P F R G +K +ACG +A +TD G ++TFG G G G G
Sbjct: 373 ALLPGAVEQQQPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHG 432
Query: 336 STDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLP 395
+D P V +LLG ++ VA G H + +S++ +++A ++ + P
Sbjct: 433 GLNDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHSCP 492
Query: 396 RLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL 440
+ + P + ++ V CG + ++ G+ G N++ +LGL
Sbjct: 493 QQVPMPPGQE--AQRVICGIDSSVILTVPGQALACGSNRFNKLGL 535
Score = 135 (52.6 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 47/180 (26%), Positives = 77/180 (42%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCG----QGSTDDELSPNCVSSLL----GIQIEG 356
+A G A +T +G L+ + G G G+ + + P VS L G+ I+
Sbjct: 343 VAAGRTQKAGVTRSGRLILWEAPPLGAGGGALLPGAVEQQ-QPQFVSRFLEGQSGVTIKH 401
Query: 357 VAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGAR 416
VA G T C++ G + + P +++A L V+CGA
Sbjct: 402 VACGDLFTACLTDRGIIMTFGSGSNGCLGHGGLNDISQPTIVEA--LLGYEMVQVACGAS 459
Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE-GCVPRNVACGWWHTLLLAVP 475
H ++ + ++F WG G+LGLG + P QV + G + V CG +++L VP
Sbjct: 460 HVLALSTERELFAWGRGDGGRLGLGTRESHSCPQQVPMPPGQEAQRVICGIDSSVILTVP 519
Score = 120 (47.3 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 34/106 (32%), Positives = 48/106 (45%)
Query: 308 GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI 367
G HSA +T +G TFG +GQ G + +P V L GI+I VA G T+ I
Sbjct: 575 GTAHSAAVTASGDCYTFGSNQHGQLGTNARRVSRAPCQVQGLQGIKIAMVACGDAFTVAI 634
Query: 368 SSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSC 413
++G+VY+ + A LPR + + SVSC
Sbjct: 635 GAEGEVYSWGKGARGRLGRRDEDA-ALPRPVQLDETQPYTVTSVSC 679
Score = 111 (44.1 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 48/209 (22%), Positives = 79/209 (37%)
Query: 274 SYGKDRSAALSRGSVNS-EGPGF--RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
++G + L G +N P + G + +ACG H ++ L +G G G
Sbjct: 420 TFGSGSNGCLGHGGLNDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGG 479
Query: 331 QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXX-------- 382
+ G G+ + P V G + + V G+ ++ ++ G A
Sbjct: 480 RLGLGTRESHSCPQQVPMPPGQEAQRVICGIDSSVILTVPGQALACGSNRFNKLGLDHLS 539
Query: 383 -----XXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQ 437
++A L AP L+ SV G H+A + G + +G N++GQ
Sbjct: 540 LGEEPALHQQVEEALNFTPLGSAP-LDQEPLLSVDLGTAHSAAVTASGDCYTFGSNQHGQ 598
Query: 438 LGLGDVIDRNIPSQVT-IEGCVPRNVACG 465
LG P QV ++G VACG
Sbjct: 599 LGTNARRVSRAPCQVQGLQGIKIAMVACG 627
Score = 69 (29.3 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 30/108 (27%), Positives = 49/108 (45%)
Query: 20 LPGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCG--FAMAISDSRKLITWGSTDD--L 75
LPGA+ Q+ P V R G + + CG F ++D ++T+GS + L
Sbjct: 375 LPGAVEQQQP---QFVSRF--LEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCL 429
Query: 76 GQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
G + I E L E +V+ A G +H +A++ E++ WG
Sbjct: 430 GHGGLNDISQPTIVEAL-LGYE--MVQVACGASHVLALSTERELFAWG 474
Score = 65 (27.9 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 18/71 (25%), Positives = 26/71 (36%)
Query: 53 GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
G +A+S R+L WG D T H P+ P+P + G V
Sbjct: 457 GASHVLALSTERELFAWGRGDGGRLGLGTRESHS-CPQQVPMPPGQEAQRVICGIDSSVI 515
Query: 113 VTEGGEVYTWG 123
+T G+ G
Sbjct: 516 LTVPGQALACG 526
Score = 57 (25.1 bits), Expect = 6.5e-12, Sum P(2) = 6.5e-12
Identities = 31/109 (28%), Positives = 38/109 (34%)
Query: 33 PLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPF 92
PL P+T GS C + +R I L Y T G G + P
Sbjct: 280 PLATGPPMTPGSTGSRTTSARCR-GVPRGPARPAIP----PPLSSVY-TWG--GGLSAPL 331
Query: 93 PLPT-EASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTG 140
LP +V+ AAG VT G + W E P G G L G
Sbjct: 332 RLPMLNTEVVQVAAGRTQKAGVTRSGRLILW---EAPPLGAGGGALLPG 377
Score = 46 (21.3 bits), Expect = 6.1e-06, Sum P(3) = 6.1e-06
Identities = 11/26 (42%), Positives = 13/26 (50%)
Query: 212 PCLVTLNPGVRIATVAAGGRHTLALS 237
P +V G + VA G H LALS
Sbjct: 440 PTIVEALLGYEMVQVACGASHVLALS 465
>UNIPROTKB|F1RJL0 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104312 OMA:MVTLAKS
EMBL:FP326664 RefSeq:XP_003354559.2 Ensembl:ENSSSCT00000008468
GeneID:100513850 KEGG:ssc:100513850 Uniprot:F1RJL0
Length = 470
Score = 155 (59.6 bits), Expect = 8.0e-12, Sum P(2) = 8.0e-12
Identities = 58/209 (27%), Positives = 91/209 (43%)
Query: 275 YGKDRSAALSRGSVNSEGP--GFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YG 330
+G D L ++ S G + G V +A G ++ G+L FGWG Y
Sbjct: 262 WGADGQTGLGHYNITSAPTKLGGDLAGVNVVQVATYGDCCLAVSADGSL--FGWGNSEYL 319
Query: 331 QCGQGSTDDELS-PNCVSSLLGI-QIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXX 388
Q + +++ P C+ G+ Q++ A G ++ +G V+
Sbjct: 320 QLASVTDSTQVNVPRCLP-FSGVGQVKQAACGGTGCAVLNGEGHVFVWGYGILGKGPNLV 378
Query: 389 DQA--ETLP-RLLDAPSLE-NVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVI 444
+ A E +P L L V + CG H A + D G++F WG N G LG+G +
Sbjct: 379 ETALPEMIPPTLFGLTELNPEVRVSRIRCGLSHFAALTDRGELFVWGKNIRGCLGIGRLE 438
Query: 445 DRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
D+ P +VT+ G P +VACG H + LA
Sbjct: 439 DQYFPWRVTMPG-EPVDVACGVDHMVTLA 466
Score = 142 (55.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 46/179 (25%), Positives = 76/179 (42%)
Query: 293 PGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL--SPNCVSSLL 350
P R V ++CG HS V+TD + + G YGQCG+ ++E+ + V +
Sbjct: 173 PLHRPQETQVLQVSCGRAHSLVLTDGEGVFSMGNNSYGQCGRKVVENEIYSESHKVHRMQ 232
Query: 351 GI--QIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHS 408
Q+ VA G H++ ++ G+VY+ + P L L V+
Sbjct: 233 DFDGQVVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSAPTKLGG-DLAGVNV 291
Query: 409 KSVSCGARHTAVIADDGKVFCWGWNKYGQLG-LGDVIDRNIPSQVTIEGCVP-RNVACG 465
V+ ++ DG +F WG ++Y QL + D N+P + G + ACG
Sbjct: 292 VQVATYGDCCLAVSADGSLFGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGQVKQAACG 350
Score = 78 (32.5 bits), Expect = 8.0e-12, Sum P(2) = 8.0e-12
Identities = 26/100 (26%), Positives = 46/100 (46%)
Query: 30 ILSPLVVRLPLTVGSAWRDVCGGGCGFA--MAISDSRKLITWGSTD--DLGQSYVTSGKH 85
+L P V LPL + V CG A + ++D + + G+ G+ V + +
Sbjct: 164 VLEPSPVPLPLHRPQETQ-VLQVSCGRAHSLVLTDGEGVFSMGNNSYGQCGRKVVENEIY 222
Query: 86 GEIPEPFPLPT-EASIVKAAAGWAHCVAVTEGGEVYTWGW 124
E + + + +V+ A G H + +T+ GEVY+ GW
Sbjct: 223 SESHKVHRMQDFDGQVVQVACGQDHSLFLTDKGEVYSCGW 262
Score = 72 (30.4 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 33/116 (28%), Positives = 51/116 (43%)
Query: 22 GALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLI-TWG---STDD-LG 76
G P+R P + L + SA CG GF + S +R + WG + D LG
Sbjct: 95 GLRPRRRIQCVPYRLELDQKISSA---ACG--YGFTLLSSKTRDVTKVWGMGLNKDSQLG 149
Query: 77 ----QSYVTSGKHGEI-PEPFPLPT----EASIVKAAAGWAHCVAVTEGGEVYTWG 123
+ T G + P P PLP E +++ + G AH + +T+G V++ G
Sbjct: 150 FHRSRKDKTRGYEYVLEPSPVPLPLHRPQETQVLQVSCGRAHSLVLTDGEGVFSMG 205
>ZFIN|ZDB-GENE-040426-2213 [details] [associations]
symbol:rcc2 "regulator of chromosome condensation
2" species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-040426-2213 GO:GO:0005730 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104160 EMBL:BC066628
IPI:IPI00486648 RefSeq:NP_998341.1 UniGene:Dr.828
ProteinModelPortal:Q6NYE2 STRING:Q6NYE2 PRIDE:Q6NYE2
Ensembl:ENSDART00000010647 GeneID:406455 KEGG:dre:406455 CTD:55920
HOGENOM:HOG000232061 HOVERGEN:HBG080538 InParanoid:Q6NYE2
OMA:FGENKLG OrthoDB:EOG4DNF4B NextBio:20818048 ArrayExpress:Q6NYE2
Bgee:Q6NYE2 Uniprot:Q6NYE2
Length = 495
Score = 138 (53.6 bits), Expect = 8.6e-12, Sum P(2) = 8.6e-12
Identities = 45/189 (23%), Positives = 82/189 (43%)
Query: 291 EGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVS--S 348
+G VP + +ACG H+ V+ + ++G+G YG+ G DE+ P V
Sbjct: 294 DGQVLPVPNVVARDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD 353
Query: 349 LLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHS 408
G + G + +S G ++ ++ P+ + L
Sbjct: 354 FPGRGATQIYCGYQCSFALSEMGGLFFWGVTNTSR------ESTMYPKAVQ--DLCGWKI 405
Query: 409 KSVSCGARHTAVIADDGKVFCWGWNK-YGQLGLGDVIDRNIPS--QV-TIEGCVPRNVAC 464
+S++CG V ADD + WG + +G+LG GD ++ + +V T++G V
Sbjct: 406 RSLACGKSSIIVAADDSTI-SWGPSPTFGELGYGDNKPKSSTTAQEVKTLDGVYSEQVVM 464
Query: 465 GWWHTLLLA 473
G+ H+L++A
Sbjct: 465 GYSHSLVIA 473
Score = 122 (48.0 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 44/157 (28%), Positives = 64/157 (40%)
Query: 311 HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
HS +IT G L ++G GQ G G T +P + L I A G HT+ ++ +
Sbjct: 134 HSLIITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAACGRNHTLALTEN 193
Query: 371 GDVYAXXXXXXXXXXXXXDQAETL-PRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFC 429
G VY L P + V V+CGA + ++ G ++
Sbjct: 194 GTVYTFGENKLGQLGQGNQTDAVLSPATIQYNGQPIV---KVACGAEFSMIVDCKGNLYS 250
Query: 430 WGWNKYGQLGL---GDVIDRNIPSQVTIEGCVPRNVA 463
+G +YGQLG G I R + E +PR VA
Sbjct: 251 FGCPEYGQLGHNSDGKFIARAQRIEFDCE-LIPRRVA 286
Score = 97 (39.2 bits), Expect = 8.6e-12, Sum P(2) = 8.6e-12
Identities = 29/76 (38%), Positives = 37/76 (48%)
Query: 49 VCGGGCG-FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGW 107
V G C ++ I+ KL +WG D GQ K E P+ E IV AA G
Sbjct: 126 VVSGPCAAHSLIITTEGKLWSWGRNDK-GQLGHGDTKRLEAPKLIEGLGEEVIVAAACGR 184
Query: 108 AHCVAVTEGGEVYTWG 123
H +A+TE G VYT+G
Sbjct: 185 NHTLALTENGTVYTFG 200
Score = 72 (30.4 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 18/66 (27%), Positives = 31/66 (46%)
Query: 274 SYGKDRSAALSRGSVNSE--GPG-FRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
++G+++ L +G+ P + G + +ACG S ++ G L +FG YG
Sbjct: 198 TFGENKLGQLGQGNQTDAVLSPATIQYNGQPIVKVACGAEFSMIVDCKGNLYSFGCPEYG 257
Query: 331 QCGQGS 336
Q G S
Sbjct: 258 QLGHNS 263
Score = 49 (22.3 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 20/82 (24%), Positives = 37/82 (45%)
Query: 49 VCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGE-IPEPFPLPTEAS-IVKAA 104
+ CG +A++++ + T+G + LGQ + G + + P + IVK A
Sbjct: 177 IVAAACGRNHTLALTENGTVYTFGE-NKLGQ--LGQGNQTDAVLSPATIQYNGQPIVKVA 233
Query: 105 AGWAHCVAVTEGGEVYTWGWKE 126
G + V G +Y++G E
Sbjct: 234 CGAEFSMIVDCKGNLYSFGCPE 255
Score = 45 (20.9 bits), Expect = 4.8e-07, Sum P(3) = 4.8e-07
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 97 EASIVKAAAGWAHCVAVTEGGEVYTWG 123
+ S V + AH + +T G++++WG
Sbjct: 122 QVSCVVSGPCAAHSLIITTEGKLWSWG 148
Score = 43 (20.2 bits), Expect = 4.8e-07, Sum P(3) = 4.8e-07
Identities = 14/36 (38%), Positives = 18/36 (50%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGR-HTLALSD 238
GD P L+ G + AA GR HTLAL++
Sbjct: 158 GDTKRLEAPKLIE-GLGEEVIVAAACGRNHTLALTE 192
>UNIPROTKB|Q86SG6 [details] [associations]
symbol:NEK8 "Serine/threonine-protein kinase Nek8"
species:9606 "Homo sapiens" [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0072372 "primary cilium" evidence=ISS]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 GO:GO:0005737 GO:GO:0005856
GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372
EMBL:CH471159 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 KO:K08857 Orphanet:655 EMBL:AC010761 CTD:284086
HOGENOM:HOG000006908 HOVERGEN:HBG098799 EMBL:AY242354 EMBL:AY267371
EMBL:BC112240 EMBL:BC113705 EMBL:AL833909 IPI:IPI00328397
RefSeq:NP_835464.1 UniGene:Hs.448468 ProteinModelPortal:Q86SG6
SMR:Q86SG6 IntAct:Q86SG6 STRING:Q86SG6 PhosphoSite:Q86SG6
DMDM:34098463 PaxDb:Q86SG6 PRIDE:Q86SG6 DNASU:284086
Ensembl:ENST00000268766 GeneID:284086 KEGG:hsa:284086
UCSC:uc002hcp.3 GeneCards:GC17P027055 HGNC:HGNC:13387 HPA:HPA040661
HPA:HPA040679 MIM:609799 MIM:613824 neXtProt:NX_Q86SG6
PharmGKB:PA38361 InParanoid:Q86SG6 OMA:EREVFAW OrthoDB:EOG4PZJ65
GenomeRNAi:284086 NextBio:94527 ArrayExpress:Q86SG6 Bgee:Q86SG6
CleanEx:HS_NEK8 Genevestigator:Q86SG6 GermOnline:ENSG00000160602
Uniprot:Q86SG6
Length = 692
Score = 178 (67.7 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 40/142 (28%), Positives = 71/142 (50%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
G +K +ACG +A +TD G ++TFG G G G GS D P V +LLG ++ VA
Sbjct: 390 GVTIKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVA 449
Query: 359 AGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
G H + +S++ +++A ++ + P+ + P + ++ V CG +
Sbjct: 450 CGASHVLALSTERELFAWGRGDSGRLGLGTRESHSCPQQVPMPPGQE--AQRVVCGIDSS 507
Query: 419 AVIADDGKVFCWGWNKYGQLGL 440
++ G+ G N++ +LGL
Sbjct: 508 MILTVPGQALACGSNRFNKLGL 529
Score = 143 (55.4 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 51/195 (26%), Positives = 83/195 (42%)
Query: 292 GPGFRVP--GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGS----TDDELSPNC 345
G R+P V +A G A +T +G L+ + G G GS ++ P
Sbjct: 322 GTPLRLPMLNTEVVQVAAGRTQKAGVTRSGRLILWEAPPLG-AGGGSLLPGAVEQPQPQF 380
Query: 346 VSSLL----GIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAP 401
+S L G+ I+ VA G + T C++ G + + P +++A
Sbjct: 381 ISRFLEGQSGVTIKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEA- 439
Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE-GCVPR 460
L V+CGA H ++ + ++F WG G+LGLG + P QV + G +
Sbjct: 440 -LLGYEMVQVACGASHVLALSTERELFAWGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQ 498
Query: 461 NVACGWWHTLLLAVP 475
V CG +++L VP
Sbjct: 499 RVVCGIDSSMILTVP 513
Score = 121 (47.7 bits), Expect = 8.0e-07, Sum P(2) = 8.0e-07
Identities = 53/218 (24%), Positives = 87/218 (39%)
Query: 274 SYGKDRSAALSRGSVNSEGPGFRVP---GNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
++G+ S L G+ S +VP G + + CG S ++T G L G +
Sbjct: 466 AWGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFN 525
Query: 331 QCGQG--STDDELSPN-----CVS-SLLG---IQIE---GVAAGLWHTICISSDGDVYAX 376
+ G S +E P+ +S +LLG + E + G H+ +++ GD Y
Sbjct: 526 KLGLDHLSLGEEPVPHQQVEEALSFTLLGSAPLDQEPLLSIDLGTAHSAAVTASGDCYTF 585
Query: 377 XXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYG 436
+ P LE + V+CG T I + +V+ WG G
Sbjct: 586 GSNQHGQLGTNTRRGSRAP--CKVQGLEGIKMAMVACGDAFTVAIGAESEVYSWGKGARG 643
Query: 437 QLGLGDVIDRNIPSQVTIEGCVP---RNVACGWWHTLL 471
+LG D D +P V ++ P +V+C +TLL
Sbjct: 644 RLGRRDE-DAGLPRPVQLDETHPYTVTSVSCCHGNTLL 680
Score = 71 (30.1 bits), Expect = 8.0e-07, Sum P(2) = 8.0e-07
Identities = 30/108 (27%), Positives = 49/108 (45%)
Query: 20 LPGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCG--FAMAISDSRKLITWGSTDD--L 75
LPGA+ Q P + R G + + CG F ++D ++T+GS + L
Sbjct: 369 LPGAVEQPQP---QFISRF--LEGQSGVTIKHVACGDFFTACLTDRGIIMTFGSGSNGCL 423
Query: 76 GQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
G +T I E L E +V+ A G +H +A++ E++ WG
Sbjct: 424 GHGSLTDISQPTIVEAL-LGYE--MVQVACGASHVLALSTERELFAWG 468
Score = 57 (25.1 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 18/56 (32%), Positives = 22/56 (39%)
Query: 86 GEIPEPFPLPT-EASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTG 140
G + P LP +V+ AAG VT G + W E P G G L G
Sbjct: 319 GGLGTPLRLPMLNTEVVQVAAGRTQKAGVTRSGRLILW---EAPPLGAGGGSLLPG 371
Score = 46 (21.3 bits), Expect = 4.6e-06, Sum P(3) = 4.6e-06
Identities = 11/26 (42%), Positives = 13/26 (50%)
Query: 212 PCLVTLNPGVRIATVAAGGRHTLALS 237
P +V G + VA G H LALS
Sbjct: 434 PTIVEALLGYEMVQVACGASHVLALS 459
>WB|WBGene00021685 [details] [associations]
symbol:herc-1 species:6239 "Caenorhabditis elegans"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0006464 "cellular
protein modification process" evidence=IEA] [GO:0019915 "lipid
storage" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0000003 GO:GO:0019915 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 HOGENOM:HOG000208452 EMBL:FO081800
HSSP:Q05086 RefSeq:NP_490834.1 ProteinModelPortal:Q9BL11 SMR:Q9BL11
STRING:Q9BL11 PaxDb:Q9BL11 EnsemblMetazoa:Y48G8AL.1.1
EnsemblMetazoa:Y48G8AL.1.2 GeneID:171700 KEGG:cel:CELE_Y48G8AL.1
UCSC:Y48G8AL.1 CTD:171700 WormBase:Y48G8AL.1 InParanoid:Q9BL11
OMA:PRELMEL NextBio:872357 Uniprot:Q9BL11
Length = 1019
Score = 149 (57.5 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 57/206 (27%), Positives = 88/206 (42%)
Query: 274 SYGKDRSAALSRGSVNSEGPGFRVPGNYVKG-----IACGGRHSAVITDAGALLTFGWGL 328
S G + L RGS +EG P ++ I+ G H+ +TD G + +G
Sbjct: 64 SVGSNMDGQLGRGS-RTEGSFSIYPVSWTSSAKIIQISAGRSHTVSVTDDGRVFAWGSNE 122
Query: 329 YGQCGQGSTDD-ELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXX 387
+GQ G S + +P V + I ++ VA+G H I + G V+
Sbjct: 123 HGQLGMESKFTWQGTPRRVQEINDI-VQ-VASGSNHCIALDEGGRVFVWGEQADGRCIH- 179
Query: 388 XDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
+ E + +L P + V GARH ++ G VF WG N G+LG+ D+ +
Sbjct: 180 --RPEPVEQLSGVPIVR------VLAGARHCLALSASGAVFTWGQNNSGELGIDDLRPQT 231
Query: 448 IPSQV-TIEGCVPRNVACGWWHTLLL 472
V ++G ACG HT+LL
Sbjct: 232 SVQHVHQMDGLGVVEAACGDNHTVLL 257
Score = 134 (52.2 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 36/123 (29%), Positives = 50/123 (40%)
Query: 306 ACGGRHSAVITDAGALLTFGWGLYGQCGQGS-TDDELSPNCVSSLLGIQIEGVAAGLWHT 364
ACG H+ ++T G +FG GQCG G + +P VS L+G + +AAG HT
Sbjct: 248 ACGDNHTVLLTHCGRTFSFGSDALGQCGFGKKVEKRTNPTAVSDLIGSHVTRIAAGACHT 307
Query: 365 ICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
I I G Y ++ PR D L+ H V G T +
Sbjct: 308 IAICK-GAPYPFGLNSSGQLGNGKIMTQSTPRKTD--ELD--HVTGVFAGYHQTFFVRSS 362
Query: 425 GKV 427
G +
Sbjct: 363 GTI 365
Score = 132 (51.5 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 36/135 (26%), Positives = 62/135 (45%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGS-TDDELSPNCVSSLLGIQIEGV 357
G V + CG +H+ +T G + + G + GQ G+GS T+ S VS +I +
Sbjct: 40 GTAVTSVTCGEQHTVFLTKDGKMWSVGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQI 99
Query: 358 AAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQA-ETLPRLLDAPSLENVHSKSVSCGAR 416
+AG HT+ ++ DG V+A + PR + + ++ V+ G+
Sbjct: 100 SAGRSHTVSVTDDGRVFAWGSNEHGQLGMESKFTWQGTPRRVQ--EINDI--VQVASGSN 155
Query: 417 HTAVIADDGKVFCWG 431
H + + G+VF WG
Sbjct: 156 HCIALDEGGRVFVWG 170
Score = 115 (45.5 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 37/158 (23%), Positives = 66/158 (41%)
Query: 293 PGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGI 352
P ++ G + + G RH ++ +GA+ T+G G+ G + S V + G+
Sbjct: 183 PVEQLSGVPIVRVLAGARHCLALSASGAVFTWGQNNSGELGIDDLRPQTSVQHVHQMDGL 242
Query: 353 QIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXD-QAETLPRLLDAPSLENVHSKSV 411
+ A G HT+ ++ G ++ + T P + L H +
Sbjct: 243 GVVEAACGDNHTVLLTHCGRTFSFGSDALGQCGFGKKVEKRTNPTAVS--DLIGSHVTRI 300
Query: 412 SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIP 449
+ GA HT I G + +G N GQLG G ++ ++ P
Sbjct: 301 AAGACHTIAICK-GAPYPFGLNSSGQLGNGKIMTQSTP 337
Score = 98 (39.6 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 23/71 (32%), Positives = 37/71 (52%)
Query: 53 GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
G ++++D ++ WGS + GQ + S K P + IV+ A+G HC+A
Sbjct: 102 GRSHTVSVTDDGRVFAWGSNEH-GQLGMES-KFTWQGTPRRVQEINDIVQVASGSNHCIA 159
Query: 113 VTEGGEVYTWG 123
+ EGG V+ WG
Sbjct: 160 LDEGGRVFVWG 170
Score = 91 (37.1 bits), Expect = 6.9e-10, Sum P(2) = 6.9e-10
Identities = 21/71 (29%), Positives = 33/71 (46%)
Query: 53 GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
G +A+ + ++ WG D G+ PEP + IV+ AG HC+A
Sbjct: 153 GSNHCIALDEGGRVFVWGEQAD--------GRCIHRPEPVEQLSGVPIVRVLAGARHCLA 204
Query: 113 VTEGGEVYTWG 123
++ G V+TWG
Sbjct: 205 LSASGAVFTWG 215
Score = 89 (36.4 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 30/105 (28%), Positives = 50/105 (47%)
Query: 31 LSPLVVRLPLTVGSAWRDVCGGG-----CG--FAMAISDSRKLITWGSTDD--LGQSYVT 81
LS +++P + A D+ G CG + ++ K+ + GS D LG+ T
Sbjct: 20 LSESTIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKDGKMWSVGSNMDGQLGRGSRT 79
Query: 82 SGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKE 126
G P + + A I++ +AG +H V+VT+ G V+ WG E
Sbjct: 80 EGSFSIYPVSWT--SSAKIIQISAGRSHTVSVTDDGRVFAWGSNE 122
Score = 52 (23.4 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 12/18 (66%), Positives = 12/18 (66%)
Query: 220 GVRIATVAAGGRHTLALS 237
GV I V AG RH LALS
Sbjct: 189 GVPIVRVLAGARHCLALS 206
Score = 44 (20.5 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 10/37 (27%), Positives = 21/37 (56%)
Query: 202 SSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSD 238
S + + S +P V+ +I ++AG HT++++D
Sbjct: 77 SRTEGSFSIYP--VSWTSSAKIIQISAGRSHTVSVTD 111
Score = 37 (18.1 bits), Expect = 3.5e-09, Sum P(3) = 3.5e-09
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 223 IATVAAGGRHTLALSD 238
I VA+G H +AL +
Sbjct: 147 IVQVASGSNHCIALDE 162
>UNIPROTKB|Q9BL11 [details] [associations]
symbol:herc-1 "Protein HERC-1" species:6239 "Caenorhabditis
elegans" [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0005634 "nucleus"
evidence=IBA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0000003 GO:GO:0019915 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00660000095216 HOGENOM:HOG000208452
EMBL:FO081800 HSSP:Q05086 RefSeq:NP_490834.1
ProteinModelPortal:Q9BL11 SMR:Q9BL11 STRING:Q9BL11 PaxDb:Q9BL11
EnsemblMetazoa:Y48G8AL.1.1 EnsemblMetazoa:Y48G8AL.1.2 GeneID:171700
KEGG:cel:CELE_Y48G8AL.1 UCSC:Y48G8AL.1 CTD:171700
WormBase:Y48G8AL.1 InParanoid:Q9BL11 OMA:PRELMEL NextBio:872357
Uniprot:Q9BL11
Length = 1019
Score = 149 (57.5 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 57/206 (27%), Positives = 88/206 (42%)
Query: 274 SYGKDRSAALSRGSVNSEGPGFRVPGNYVKG-----IACGGRHSAVITDAGALLTFGWGL 328
S G + L RGS +EG P ++ I+ G H+ +TD G + +G
Sbjct: 64 SVGSNMDGQLGRGS-RTEGSFSIYPVSWTSSAKIIQISAGRSHTVSVTDDGRVFAWGSNE 122
Query: 329 YGQCGQGSTDD-ELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXX 387
+GQ G S + +P V + I ++ VA+G H I + G V+
Sbjct: 123 HGQLGMESKFTWQGTPRRVQEINDI-VQ-VASGSNHCIALDEGGRVFVWGEQADGRCIH- 179
Query: 388 XDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
+ E + +L P + V GARH ++ G VF WG N G+LG+ D+ +
Sbjct: 180 --RPEPVEQLSGVPIVR------VLAGARHCLALSASGAVFTWGQNNSGELGIDDLRPQT 231
Query: 448 IPSQV-TIEGCVPRNVACGWWHTLLL 472
V ++G ACG HT+LL
Sbjct: 232 SVQHVHQMDGLGVVEAACGDNHTVLL 257
Score = 134 (52.2 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 36/123 (29%), Positives = 50/123 (40%)
Query: 306 ACGGRHSAVITDAGALLTFGWGLYGQCGQGS-TDDELSPNCVSSLLGIQIEGVAAGLWHT 364
ACG H+ ++T G +FG GQCG G + +P VS L+G + +AAG HT
Sbjct: 248 ACGDNHTVLLTHCGRTFSFGSDALGQCGFGKKVEKRTNPTAVSDLIGSHVTRIAAGACHT 307
Query: 365 ICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
I I G Y ++ PR D L+ H V G T +
Sbjct: 308 IAICK-GAPYPFGLNSSGQLGNGKIMTQSTPRKTD--ELD--HVTGVFAGYHQTFFVRSS 362
Query: 425 GKV 427
G +
Sbjct: 363 GTI 365
Score = 132 (51.5 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 36/135 (26%), Positives = 62/135 (45%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGS-TDDELSPNCVSSLLGIQIEGV 357
G V + CG +H+ +T G + + G + GQ G+GS T+ S VS +I +
Sbjct: 40 GTAVTSVTCGEQHTVFLTKDGKMWSVGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQI 99
Query: 358 AAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQA-ETLPRLLDAPSLENVHSKSVSCGAR 416
+AG HT+ ++ DG V+A + PR + + ++ V+ G+
Sbjct: 100 SAGRSHTVSVTDDGRVFAWGSNEHGQLGMESKFTWQGTPRRVQ--EINDI--VQVASGSN 155
Query: 417 HTAVIADDGKVFCWG 431
H + + G+VF WG
Sbjct: 156 HCIALDEGGRVFVWG 170
Score = 115 (45.5 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 37/158 (23%), Positives = 66/158 (41%)
Query: 293 PGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGI 352
P ++ G + + G RH ++ +GA+ T+G G+ G + S V + G+
Sbjct: 183 PVEQLSGVPIVRVLAGARHCLALSASGAVFTWGQNNSGELGIDDLRPQTSVQHVHQMDGL 242
Query: 353 QIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXD-QAETLPRLLDAPSLENVHSKSV 411
+ A G HT+ ++ G ++ + T P + L H +
Sbjct: 243 GVVEAACGDNHTVLLTHCGRTFSFGSDALGQCGFGKKVEKRTNPTAVS--DLIGSHVTRI 300
Query: 412 SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIP 449
+ GA HT I G + +G N GQLG G ++ ++ P
Sbjct: 301 AAGACHTIAICK-GAPYPFGLNSSGQLGNGKIMTQSTP 337
Score = 98 (39.6 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 23/71 (32%), Positives = 37/71 (52%)
Query: 53 GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
G ++++D ++ WGS + GQ + S K P + IV+ A+G HC+A
Sbjct: 102 GRSHTVSVTDDGRVFAWGSNEH-GQLGMES-KFTWQGTPRRVQEINDIVQVASGSNHCIA 159
Query: 113 VTEGGEVYTWG 123
+ EGG V+ WG
Sbjct: 160 LDEGGRVFVWG 170
Score = 91 (37.1 bits), Expect = 6.9e-10, Sum P(2) = 6.9e-10
Identities = 21/71 (29%), Positives = 33/71 (46%)
Query: 53 GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
G +A+ + ++ WG D G+ PEP + IV+ AG HC+A
Sbjct: 153 GSNHCIALDEGGRVFVWGEQAD--------GRCIHRPEPVEQLSGVPIVRVLAGARHCLA 204
Query: 113 VTEGGEVYTWG 123
++ G V+TWG
Sbjct: 205 LSASGAVFTWG 215
Score = 89 (36.4 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 30/105 (28%), Positives = 50/105 (47%)
Query: 31 LSPLVVRLPLTVGSAWRDVCGGG-----CG--FAMAISDSRKLITWGSTDD--LGQSYVT 81
LS +++P + A D+ G CG + ++ K+ + GS D LG+ T
Sbjct: 20 LSESTIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKDGKMWSVGSNMDGQLGRGSRT 79
Query: 82 SGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKE 126
G P + + A I++ +AG +H V+VT+ G V+ WG E
Sbjct: 80 EGSFSIYPVSWT--SSAKIIQISAGRSHTVSVTDDGRVFAWGSNE 122
Score = 52 (23.4 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 12/18 (66%), Positives = 12/18 (66%)
Query: 220 GVRIATVAAGGRHTLALS 237
GV I V AG RH LALS
Sbjct: 189 GVPIVRVLAGARHCLALS 206
Score = 44 (20.5 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 10/37 (27%), Positives = 21/37 (56%)
Query: 202 SSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSD 238
S + + S +P V+ +I ++AG HT++++D
Sbjct: 77 SRTEGSFSIYP--VSWTSSAKIIQISAGRSHTVSVTD 111
Score = 37 (18.1 bits), Expect = 3.5e-09, Sum P(3) = 3.5e-09
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 223 IATVAAGGRHTLALSD 238
I VA+G H +AL +
Sbjct: 147 IVQVASGSNHCIALDE 162
>UNIPROTKB|Q96I51 [details] [associations]
symbol:WBSCR16 "Williams-Beuren syndrome chromosomal region
16 protein" species:9606 "Homo sapiens" [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 Orphanet:904 MIM:194050
EMBL:AF410455 EMBL:AL136804 EMBL:CH471292 EMBL:BC007823
EMBL:BC019008 IPI:IPI00305992 RefSeq:NP_110425.1 UniGene:Hs.723684
ProteinModelPortal:Q96I51 SMR:Q96I51 IntAct:Q96I51 STRING:Q96I51
PhosphoSite:Q96I51 DMDM:116242843 PaxDb:Q96I51 PeptideAtlas:Q96I51
PRIDE:Q96I51 DNASU:81554 Ensembl:ENST00000329959 GeneID:81554
KEGG:hsa:81554 UCSC:uc003ubr.3 CTD:81554 GeneCards:GC07M074456
HGNC:HGNC:14948 neXtProt:NX_Q96I51 PharmGKB:PA37941
HOGENOM:HOG000232125 HOVERGEN:HBG054246 InParanoid:Q96I51
OMA:MVTLAKS OrthoDB:EOG4F1X33 PhylomeDB:Q96I51 ChiTaRS:WBSCR16
GenomeRNAi:81554 NextBio:71806 ArrayExpress:Q96I51 Bgee:Q96I51
CleanEx:HS_WBSCR16 Genevestigator:Q96I51 GermOnline:ENSG00000174374
Uniprot:Q96I51
Length = 464
Score = 170 (64.9 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 46/157 (29%), Positives = 73/157 (46%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS-LLGIQIEGV 357
G V+ +ACG HS +TD G + + GWG GQ G G + SP + L G+ + V
Sbjct: 230 GQVVQ-VACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSSPTKLGGDLAGVNVIQV 288
Query: 358 AAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAET-LPRLLDAPSLENVHSKSVSCGAR 416
A + +S+DG ++ D + +PR L + V + +CG
Sbjct: 289 ATYGDCCLAVSADGGLFGWGNSEYLQLASVTDSTQVNVPRCLHFSGVGKV--RQAACGGT 346
Query: 417 HTAVIADDGKVFCWGWNKYGQLGLG-DVIDRNIPSQV 452
AV+ +G VF WG YG LG G ++++ +P +
Sbjct: 347 GCAVLNGEGHVFVWG---YGILGKGPNLVESAVPEMI 380
Score = 144 (55.7 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 55/209 (26%), Positives = 90/209 (43%)
Query: 275 YGKDRSAALSRGSVNSEGP--GFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YG 330
+G D L ++ S G + G V +A G ++ G L FGWG Y
Sbjct: 256 WGADGQTGLGHYNITSSPTKLGGDLAGVNVIQVATYGDCCLAVSADGGL--FGWGNSEYL 313
Query: 331 QCGQGSTDDELS-PNCVSSLLGI-QIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXX 388
Q + +++ P C+ G+ ++ A G ++ +G V+
Sbjct: 314 QLASVTDSTQVNVPRCLH-FSGVGKVRQAACGGTGCAVLNGEGHVFVWGYGILGKGPNLV 372
Query: 389 DQA--ETLPRLLDAPSLEN--VHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVI 444
+ A E +P L + N + + CG H A + + G++F WG N G LG+G +
Sbjct: 373 ESAVPEMIPPTLFGLTEFNPEIQVSRIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLE 432
Query: 445 DRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
D+ P +VT+ G P +VACG H + LA
Sbjct: 433 DQYFPWRVTMPG-EPVDVACGVDHMVTLA 460
Score = 138 (53.6 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 44/167 (26%), Positives = 73/167 (43%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL--SPNCVSSLLGI--QIEGVAAG 360
++CG HS V+TD + + G YGQCG+ ++E+ + V + Q+ VA G
Sbjct: 179 VSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQDFDGQVVQVACG 238
Query: 361 LWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
H++ ++ G+VY+ + P L L V+ V+
Sbjct: 239 QDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSSPTKLGG-DLAGVNVIQVATYGDCCLA 297
Query: 421 IADDGKVFCWGWNKYGQLG-LGDVIDRNIPSQVTIEGCVP-RNVACG 465
++ DG +F WG ++Y QL + D N+P + G R ACG
Sbjct: 298 VSADGGLFGWGNSEYLQLASVTDSTQVNVPRCLHFSGVGKVRQAACG 344
Score = 82 (33.9 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 27/100 (27%), Positives = 45/100 (45%)
Query: 30 ILSPLVVRLPLTVGSAWRDVCGGGCGFA--MAISDSRKLITWGSTD--DLGQSYVTSGKH 85
+L P V LPL R V CG A + ++D + + G+ G+ V + +
Sbjct: 158 VLEPSPVSLPLDRPQETR-VLQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVVENEIY 216
Query: 86 GEIPEPFPLPT-EASIVKAAAGWAHCVAVTEGGEVYTWGW 124
E + + +V+ A G H + +T+ GEVY+ GW
Sbjct: 217 SESHRVHRMQDFDGQVVQVACGQDHSLFLTDKGEVYSCGW 256
Score = 59 (25.8 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 31/118 (26%), Positives = 52/118 (44%)
Query: 22 GALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKL-IT--WG---STDD- 74
GA P+R + P+ RL L + + CG+ + S+ +T WG + D
Sbjct: 89 GARPRRR--IQPVPYRLELD-----QKISSAACGYGFTLLSSKTADVTKVWGMGLNKDSQ 141
Query: 75 LG----QSYVTSGKHGEI-PEP--FPL--PTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
LG + T G + P P PL P E +++ + G AH + +T+ V++ G
Sbjct: 142 LGFHRSRKDKTRGYEYVLEPSPVSLPLDRPQETRVLQVSCGRAHSLVLTDREGVFSMG 199
Score = 38 (18.4 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 222 RIATVAAGGRHTLALSD 238
R+ V+ G H+L L+D
Sbjct: 175 RVLQVSCGRAHSLVLTD 191
>ASPGD|ASPL0000064315 [details] [associations]
symbol:rcc1 species:162425 "Emericella nidulans"
[GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0006406
"mRNA export from nucleus" evidence=IEA] [GO:0006407 "rRNA export
from nucleus" evidence=IEA] [GO:0000054 "ribosomal subunit export
from nucleus" evidence=IEA] [GO:0031291 "Ran protein signal
transduction" evidence=IEA] [GO:0042992 "negative regulation of
transcription factor import into nucleus" evidence=IEA] [GO:1901673
"regulation of spindle assembly involved in mitosis" evidence=IEA]
[GO:0060623 "regulation of chromosome condensation" evidence=IEA]
[GO:0007093 "mitotic cell cycle checkpoint" evidence=IEA]
[GO:0030071 "regulation of mitotic metaphase/anaphase transition"
evidence=IEA] [GO:0032888 "regulation of mitotic spindle
elongation" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:BN001304
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AACD01000117 eggNOG:COG5184 OMA:PFEAIWA HOGENOM:HOG000170207
OrthoDB:EOG466ZVF RefSeq:XP_664582.1 ProteinModelPortal:Q5AXK2
STRING:Q5AXK2 EnsemblFungi:CADANIAT00000503 GeneID:2870170
KEGG:ani:AN6978.2 Uniprot:Q5AXK2
Length = 533
Score = 130 (50.8 bits), Expect = 2.5e-11, Sum P(3) = 2.5e-11
Identities = 48/200 (24%), Positives = 82/200 (41%)
Query: 283 LSRGSVNSEGPG-FRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCG--QGSTDD 339
+ R +N P F +P V I G HS + +G + +G +G+ G + + D
Sbjct: 321 IERNKLNGLQPREFGLPKGIVH-IGAGAFHSFAVHQSGKVFAWGLNSFGETGIRENAGDS 379
Query: 340 ELS---PNCVSSLLGIQIEGVAAGLWHTICISSDGD--VYAXXXXXXXXXXXXX--DQA- 391
E + P V SL + + G H+I + DG+ V+ D A
Sbjct: 380 EAAIVHPTVVDSLSKKNVTQICGGAHHSIAATQDGECLVWGRLDGYQTGLKIDTLPDDAV 439
Query: 392 ----ETLPRLLDAPS-LENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR 446
PR+L P+ + + +K+V+ G+ H+ I G+ + WG++ Q G G D
Sbjct: 440 IKDERDRPRILIEPTAVPGIKAKAVAAGSDHSIAIDTSGRPWSWGFSATYQTGQGTQDDV 499
Query: 447 NIPSQVTIEGCVPRNVACGW 466
+ + IE R + W
Sbjct: 500 EVAT--VIENTAVRGKSLNW 517
Score = 115 (45.5 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 49/197 (24%), Positives = 77/197 (39%)
Query: 293 PGFRVP-GNYVKGIACGGRHSAVITDAGALLTFGWGLY----GQCG-QGSTDDELSPNCV 346
P P G + +A G S +TD G + +GWG + G G T + +P +
Sbjct: 223 PSSAFPHGTVIVEVAAGDSSSFALTDEGQV--YGWGTFRSNDGILGFDAKTKVQTTPKLL 280
Query: 347 SSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETL----PRLLDAPS 402
L +I+ + G H + ++ G V + + L PR P
Sbjct: 281 PDLK--KIKHLVCGDNHVLALNDKGAVLSWGSGQQNQLGRRIIERNKLNGLQPREFGLPK 338
Query: 403 LENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL----GDVIDRNIPSQVTIEGCV 458
VH + GA H+ + GKVF WG N +G+ G+ GD + I ++
Sbjct: 339 -GIVH---IGAGAFHSFAVHQSGKVFAWGLNSFGETGIRENAGDS-EAAIVHPTVVDSLS 393
Query: 459 PRNVA--CGWWHTLLLA 473
+NV CG H + A
Sbjct: 394 KKNVTQICGGAHHSIAA 410
Score = 93 (37.8 bits), Expect = 2.5e-11, Sum P(3) = 2.5e-11
Identities = 30/86 (34%), Positives = 41/86 (47%)
Query: 70 GSTDDLGQSY---VTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKE 126
GS+ +LG V K + P LP + +V+ A G HCVA+T +V TWG +
Sbjct: 118 GSSGELGLGVGKNVIDVKRPRL-NPHLLPDDVGVVQVAVGGMHCVALTHDNKVLTWGVND 176
Query: 127 CVPSGRVFGDLSTGTGLDKDVFERQS 152
GR D +T G KD+ R S
Sbjct: 177 QGALGR---D-TTWEGGYKDMDNRDS 198
Score = 62 (26.9 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 95 PTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
P IV+ AAG + A+T+ G+VY WG
Sbjct: 228 PHGTVIVEVAAGDSSSFALTDEGQVYGWG 256
Score = 53 (23.7 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 19/64 (29%), Positives = 31/64 (48%)
Query: 27 RSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDD--LGQSYVTSGK 84
+ P L+P + LP VG V G C +A++ K++TWG D LG+ G
Sbjct: 135 KRPRLNPHL--LPDDVGVVQVAVGGMHC---VALTHDNKVLTWGVNDQGALGRDTTWEGG 189
Query: 85 HGEI 88
+ ++
Sbjct: 190 YKDM 193
Score = 53 (23.7 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 19/81 (23%), Positives = 31/81 (38%)
Query: 43 GSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVK 102
G+ +V G + A++D ++ WG+ K P LP I
Sbjct: 230 GTVIVEVAAGDSS-SFALTDEGQVYGWGTFRSNDGILGFDAKTKVQTTPKLLPDLKKIKH 288
Query: 103 AAAGWAHCVAVTEGGEVYTWG 123
G H +A+ + G V +WG
Sbjct: 289 LVCGDNHVLALNDKGAVLSWG 309
Score = 48 (22.0 bits), Expect = 2.5e-11, Sum P(3) = 2.5e-11
Identities = 17/49 (34%), Positives = 23/49 (46%)
Query: 198 AESSSSGDEN--LSAFPCLVTLNP------GVRIATVAAGGRHTLALSD 238
++S S D+N L+ C T P G I VAAG + AL+D
Sbjct: 200 SDSDSDSDDNPDLNPHECTPTAIPSSAFPHGTVIVEVAAGDSSSFALTD 248
Score = 40 (19.1 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 221 VRIATVAAGGRHTLALS 237
V + VA GG H +AL+
Sbjct: 148 VGVVQVAVGGMHCVALT 164
>UNIPROTKB|Q3MHW0 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9913 "Bos taurus" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0050709 "negative regulation of protein
secretion" evidence=IEA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
eggNOG:COG5184 GeneTree:ENSGT00700000104160 EMBL:BC104610
IPI:IPI00689945 RefSeq:NP_001069489.1 UniGene:Bt.1247
ProteinModelPortal:Q3MHW0 STRING:Q3MHW0 PRIDE:Q3MHW0
Ensembl:ENSBTAT00000007022 GeneID:534377 KEGG:bta:534377 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 InParanoid:Q3MHW0 KO:K15421
OMA:NIWAPKP OrthoDB:EOG4J1183 NextBio:20876380
PANTHER:PTHR22870:SF7 Uniprot:Q3MHW0
Length = 464
Score = 161 (61.7 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 50/186 (26%), Positives = 83/186 (44%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE-LSPNCVSSLLGIQIEGV 357
G ++ +ACG + ++T+ G +L+ G +GQ G + P + LL ++ +
Sbjct: 100 GCAIQQVACGWDFTIILTENGQVLSCGSNSFGQLGVPHGPRRCVIPQAIE-LLREKVVSI 158
Query: 358 AAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDA--PS----LENVHSKSV 411
AAGL H + ++ G V+ +TLP L A PS LEN + V
Sbjct: 159 AAGLRHALAATASGTVFQWGTGLASSGRRLCP-GQTLPLFLTAKEPSTVTGLENSQAVCV 217
Query: 412 SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVAC---GWWH 468
G+ H+A + D G+++ WG NK+GQL +P ++ +A GW H
Sbjct: 218 LAGSDHSASLTDAGELYVWGSNKHGQLA-SQAAFLLLPQRIEARCFQNEKIAAVWSGWTH 276
Query: 469 TLLLAV 474
+ V
Sbjct: 277 LVAQTV 282
Score = 150 (57.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 45/133 (33%), Positives = 60/133 (45%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
+K I GG HSAV+TD G+L G GQ G G T++ L SLLG I+ VA G
Sbjct: 51 IKRITGGGGHSAVVTDEGSLFVCGLNKDGQLGLGHTEEVLYFTPCKSLLGCAIQQVACGW 110
Query: 362 WHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAP-SLENVHSK--SVSCGARHT 418
TI ++ +G V + PR P ++E + K S++ G RH
Sbjct: 111 DFTIILTENGQVLSCGSNSFGQLGVPHG-----PRRCVIPQAIELLREKVVSIAAGLRHA 165
Query: 419 AVIADDGKVFCWG 431
G VF WG
Sbjct: 166 LAATASGTVFQWG 178
Score = 125 (49.1 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 27/66 (40%), Positives = 41/66 (62%)
Query: 409 KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG--DVIDRNIPSQVTIEGCVPRNVACGW 466
K ++ G H+AV+ D+G +F G NK GQLGLG + + P + ++ GC + VACGW
Sbjct: 52 KRITGGGGHSAVVTDEGSLFVCGLNKDGQLGLGHTEEVLYFTPCK-SLLGCAIQQVACGW 110
Query: 467 WHTLLL 472
T++L
Sbjct: 111 DFTIIL 116
Score = 115 (45.5 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 51/191 (26%), Positives = 72/191 (37%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAA---GL 361
+ G HSA +TDAG L +G +GQ + L P + + Q E +AA G
Sbjct: 217 VLAGSDHSASLTDAGELYVWGSNKHGQLASQAAF-LLLPQRIEARC-FQNEKIAAVWSGW 274
Query: 362 WHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLEN--------------VH 407
H + + G V+ + E PSL
Sbjct: 275 THLVAQTVTGKVFTWGRADYGQLGRTVETREGWESEKQDPSLPGSGPQKGTPSCLPCLTG 334
Query: 408 SKSVSCGARHT-AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACG 465
+ +SCG+ H AVI G WGWN++G G G D P V + + +V CG
Sbjct: 335 ATEISCGSEHNLAVIG--GVCHSWGWNEHGMCGDGTEADVWAPKPVPGLRFFLGLHVGCG 392
Query: 466 WWHTLLLAVPP 476
H+L L P
Sbjct: 393 AGHSLALCQLP 403
Score = 114 (45.2 bits), Expect = 2.8e-06, Sum P(3) = 2.8e-06
Identities = 44/147 (29%), Positives = 60/147 (40%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQ----C-GQGS----TDDELSPNCVSSLLGI 352
V IA G RH+ T +G + +G GL C GQ T E P+ V+ L
Sbjct: 155 VVSIAAGLRHALAATASGTVFQWGTGLASSGRRLCPGQTLPLFLTAKE--PSTVTGLENS 212
Query: 353 QIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVS 412
Q V AG H+ ++ G++Y LP+ ++A +N +V
Sbjct: 213 QAVCVLAGSDHSASLTDAGELYVWGSNKHGQLASQAAFL-LLPQRIEARCFQNEKIAAVW 271
Query: 413 CGARHTAVIADDGKVFCWGWNKYGQLG 439
G H GKVF WG YGQLG
Sbjct: 272 SGWTHLVAQTVTGKVFTWGRADYGQLG 298
Score = 91 (37.1 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 27/82 (32%), Positives = 42/82 (51%)
Query: 54 CG--FAMAISDSRKLITWGSTDDLGQSYVTSG-KHGEIPEPFPLPTEASIVKAAAGWAHC 110
CG F + ++++ ++++ GS + GQ V G + IP+ L E +V AAG H
Sbjct: 108 CGWDFTIILTENGQVLSCGS-NSFGQLGVPHGPRRCVIPQAIELLRE-KVVSIAAGLRHA 165
Query: 111 VAVTEGGEVYTWGWKECVPSGR 132
+A T G V+ WG SGR
Sbjct: 166 LAATASGTVFQWG-TGLASSGR 186
Score = 66 (28.3 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 31/115 (26%), Positives = 48/115 (41%)
Query: 14 VFMWG---YLPGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWG 70
+F WG Y L + +LS + G R + GGG G + ++D L G
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGCIKR-ITGGG-GHSAVVTDEGSLFVCG 74
Query: 71 STDDLGQSYVTSGKHGEIPEPFPLPT--EASIVKAAAGWAHCVAVTEGGEVYTWG 123
D GQ + G E+ P + +I + A GW + +TE G+V + G
Sbjct: 75 LNKD-GQ--LGLGHTEEVLYFTPCKSLLGCAIQQVACGWDFTIILTENGQVLSCG 126
Score = 40 (19.1 bits), Expect = 2.2e-06, Sum P(3) = 2.2e-06
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 222 RIATVAAGGRHTLA 235
++ ++AAG RH LA
Sbjct: 154 KVVSIAAGLRHALA 167
>UNIPROTKB|F1Q1C6 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104312 OMA:MVTLAKS EMBL:AAEX03004216
EMBL:AAEX03004217 Ensembl:ENSCAFT00000018027 Uniprot:F1Q1C6
Length = 465
Score = 150 (57.9 bits), Expect = 5.8e-11, Sum P(2) = 5.8e-11
Identities = 57/209 (27%), Positives = 90/209 (43%)
Query: 275 YGKDRSAALSRGSVNSEGP--GFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YG 330
+G D L + S G + G V +A G ++ G L FGWG Y
Sbjct: 257 WGADGQTGLGHYDITSVPTKLGGDLAGVNVVQVATYGDCCLAVSAEGGL--FGWGNSEYL 314
Query: 331 QCGQGSTDDELS-PNCVSSLLGI-QIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXX 388
Q + +++ P C+ G+ +++ A G ++ +G V+
Sbjct: 315 QLASVTDSTQVNVPRCLP-FSGVGKVKQAACGGTGCAVLNGEGHVFVWGYGILGKGPNLV 373
Query: 389 DQA--ETLPRLLDAPSLEN--VHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVI 444
+ A E +P L + N VH + CG H A + G++F WG N G LG+G +
Sbjct: 374 ETAFPEVIPPTLFGLTEFNPGVHVSHIWCGLSHFAALTSKGELFVWGKNIRGCLGIGRLE 433
Query: 445 DRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
D+ P +VT+ G P +VACG H + LA
Sbjct: 434 DQYFPWRVTMPG-EPVDVACGVDHMVTLA 461
Score = 137 (53.3 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 40/167 (23%), Positives = 74/167 (44%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL--SPNCVSSLLGI--QIEGVAAG 360
++CG HS ++TD + + G YGQCG+ ++E+ + V+ + Q+ V G
Sbjct: 180 VSCGRAHSLILTDCEGVFSMGNNAYGQCGRNVVENEIYSESHKVNRMQDFDGQVVQVVCG 239
Query: 361 LWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
H++ ++ G+VY+ ++P L L V+ V+
Sbjct: 240 QDHSLFLTDKGEVYSCGWGADGQTGLGHYDITSVPTKLGG-DLAGVNVVQVATYGDCCLA 298
Query: 421 IADDGKVFCWGWNKYGQLG-LGDVIDRNIPSQVTIEGCVP-RNVACG 465
++ +G +F WG ++Y QL + D N+P + G + ACG
Sbjct: 299 VSAEGGLFGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGKVKQAACG 345
Score = 75 (31.5 bits), Expect = 5.8e-11, Sum P(2) = 5.8e-11
Identities = 26/100 (26%), Positives = 46/100 (46%)
Query: 30 ILSPLVVRLPLTVGSAWRDVCGGGCGFA--MAISDSRKLITWGST--DDLGQSYVTSGKH 85
+L P V LPL R V CG A + ++D + + G+ G++ V + +
Sbjct: 159 VLEPSPVPLPLDRPQETR-VLQVSCGRAHSLILTDCEGVFSMGNNAYGQCGRNVVENEIY 217
Query: 86 GEIPEPFPLPT-EASIVKAAAGWAHCVAVTEGGEVYTWGW 124
E + + + +V+ G H + +T+ GEVY+ GW
Sbjct: 218 SESHKVNRMQDFDGQVVQVVCGQDHSLFLTDKGEVYSCGW 257
Score = 63 (27.2 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 31/118 (26%), Positives = 53/118 (44%)
Query: 22 GALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSR-KLIT--WG---STDD- 74
G+ P R + P+ RL L + + CG+ + S+ K +T WG + D
Sbjct: 90 GSRPPRR--IQPVPYRLELD-----QKISSAACGYGFTLLSSKTKDVTKVWGMGLNKDSQ 142
Query: 75 LG--QSYVTSGKHGEI---PEPFPLPT----EASIVKAAAGWAHCVAVTEGGEVYTWG 123
LG +S+ + E P P PLP E +++ + G AH + +T+ V++ G
Sbjct: 143 LGFHRSHKDKTRGYEYVLEPSPVPLPLDRPQETRVLQVSCGRAHSLILTDCEGVFSMG 200
Score = 48 (22.0 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPG 299
R++S P P + + G +A SR ++ P F+ G
Sbjct: 14 RLLSGPGAGPALRAGRGHGTAAGRSRSRREADAPVFQYVG 53
Score = 37 (18.1 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 222 RIATVAAGGRHTLALSD 238
R+ V+ G H+L L+D
Sbjct: 176 RVLQVSCGRAHSLILTD 192
>UNIPROTKB|Q74AS9 [details] [associations]
symbol:GSU2272 "ATS1 domain repeat lipoprotein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 RefSeq:NP_953321.1
ProteinModelPortal:Q74AS9 GeneID:2686981 KEGG:gsu:GSU2272
PATRIC:22027399 HOGENOM:HOG000020996 OMA:TGTALAW
BioCyc:GSUL243231:GH27-2248-MONOMER Uniprot:Q74AS9
Length = 403
Score = 167 (63.8 bits), Expect = 7.1e-11, Sum P(2) = 7.1e-11
Identities = 49/188 (26%), Positives = 88/188 (46%)
Query: 274 SYGKDRSAALSRGSV--NSEGPGFRVPGNY-VKGIACGGRHSAVITDAGALLTFGWGLYG 330
++G + S L G+ N ++P + ++ I+ GG H+ + GA+ +G YG
Sbjct: 215 AWGNNASGQLGNGTTLSNHMPQKVQLPSSITIRKISAGGSHNLALDSTGAIWAWGSNAYG 274
Query: 331 QCGQGSTDDELSPNCVSSLLGIQ-IEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXD 389
Q G G+T ++ +P ++ G+ V AG H++ ++S+ VY
Sbjct: 275 QLGNGTTTNQSTPVQLTLPAGVTGFIDVFAGPSHSVAVASNFTVYTWGFNTLGLLSVGTT 334
Query: 390 QAETLP-RLLDAPSLENVH-SKSVSCGARHTAVIAD-DGKVFCWGWNKYGQLGLGDVIDR 446
+ P ++ DA ++ + V G+ T V + G ++ WG+N YGQLG G +R
Sbjct: 335 GDQLSPAQVRDASNVPFTDVERVVLLGSFFTIVKKNGSGGMWAWGYNGYGQLGDGTTSNR 394
Query: 447 NIPSQVTI 454
P QV +
Sbjct: 395 TAPVQVAL 402
Score = 152 (58.6 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 53/203 (26%), Positives = 88/203 (43%)
Query: 276 GKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG 335
G+D A + S + GF G V+ +A GG HS + G + +G GQ
Sbjct: 119 GRD-PATVPTSSTPVKIGGF---GGAVQQVAAGGLHSMALA-GGTVWAWGSNSAGQLALN 173
Query: 336 --STDDELSPNCVSSL-LGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAE 392
S+ +P V + L I + AG H+I +S + YA +
Sbjct: 174 PISSATRFAPRQVETAKLPIAPTAIVAGGSHSIAYTST-EAYAWGNNASGQLGNGTTLSN 232
Query: 393 TLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
+P+ + PS ++ + +S G H + G ++ WG N YGQLG G +++ P Q+
Sbjct: 233 HMPQKVQLPS--SITIRKISAGGSHNLALDSTGAIWAWGSNAYGQLGNGTTTNQSTPVQL 290
Query: 453 TIEGCVPR--NVACGWWHTLLLA 473
T+ V +V G H++ +A
Sbjct: 291 TLPAGVTGFIDVFAGPSHSVAVA 313
Score = 143 (55.4 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 44/157 (28%), Positives = 63/157 (40%)
Query: 305 IACGGRHSAVITDAGALLTFGWG--LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
I GG HS T A + WG GQ G G+T P V I I ++AG
Sbjct: 198 IVAGGSHSIAYTSTEA---YAWGNNASGQLGNGTTLSNHMPQKVQLPSSITIRKISAGGS 254
Query: 363 HTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIA 422
H + + S G ++A ++ P L P+ V G H+ +A
Sbjct: 255 HNLALDSTGAIWAWGSNAYGQLGNGTTTNQSTPVQLTLPAGVTGFI-DVFAGPSHSVAVA 313
Query: 423 DDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVP 459
+ V+ WG+N G L +G D+ P+QV VP
Sbjct: 314 SNFTVYTWGFNTLGLLSVGTTGDQLSPAQVRDASNVP 350
Score = 53 (23.7 bits), Expect = 7.1e-11, Sum P(2) = 7.1e-11
Identities = 23/80 (28%), Positives = 35/80 (43%)
Query: 55 GFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIP-EPFPLPTEASIVK----------A 103
GFA S + + + + G S G+I +P +PT ++ VK
Sbjct: 87 GFATGASHTLAIARFDNVS--GVRAWGSNSAGQIGRDPATVPTSSTPVKIGGFGGAVQQV 144
Query: 104 AAGWAHCVAVTEGGEVYTWG 123
AAG H +A+ GG V+ WG
Sbjct: 145 AAGGLHSMALA-GGTVWAWG 163
Score = 45 (20.9 bits), Expect = 4.8e-10, Sum P(2) = 4.8e-10
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 220 GVRIATVAAGGRHTLALS 237
G + VAAGG H++AL+
Sbjct: 138 GGAVQQVAAGGLHSMALA 155
Score = 37 (18.1 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 199 ESSSSGDENLS--AFPCLVTLNPGVRIATVAAGGRHTLALS 237
ES GD + A P + L + A G HTLA++
Sbjct: 59 ESGQLGDGTTTSAATPKRLRLGFATYSSGFATGASHTLAIA 99
>TIGR_CMR|GSU_2272 [details] [associations]
symbol:GSU_2272 "lipoprotein, putative" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 RefSeq:NP_953321.1
ProteinModelPortal:Q74AS9 GeneID:2686981 KEGG:gsu:GSU2272
PATRIC:22027399 HOGENOM:HOG000020996 OMA:TGTALAW
BioCyc:GSUL243231:GH27-2248-MONOMER Uniprot:Q74AS9
Length = 403
Score = 167 (63.8 bits), Expect = 7.1e-11, Sum P(2) = 7.1e-11
Identities = 49/188 (26%), Positives = 88/188 (46%)
Query: 274 SYGKDRSAALSRGSV--NSEGPGFRVPGNY-VKGIACGGRHSAVITDAGALLTFGWGLYG 330
++G + S L G+ N ++P + ++ I+ GG H+ + GA+ +G YG
Sbjct: 215 AWGNNASGQLGNGTTLSNHMPQKVQLPSSITIRKISAGGSHNLALDSTGAIWAWGSNAYG 274
Query: 331 QCGQGSTDDELSPNCVSSLLGIQ-IEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXD 389
Q G G+T ++ +P ++ G+ V AG H++ ++S+ VY
Sbjct: 275 QLGNGTTTNQSTPVQLTLPAGVTGFIDVFAGPSHSVAVASNFTVYTWGFNTLGLLSVGTT 334
Query: 390 QAETLP-RLLDAPSLENVH-SKSVSCGARHTAVIAD-DGKVFCWGWNKYGQLGLGDVIDR 446
+ P ++ DA ++ + V G+ T V + G ++ WG+N YGQLG G +R
Sbjct: 335 GDQLSPAQVRDASNVPFTDVERVVLLGSFFTIVKKNGSGGMWAWGYNGYGQLGDGTTSNR 394
Query: 447 NIPSQVTI 454
P QV +
Sbjct: 395 TAPVQVAL 402
Score = 152 (58.6 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 53/203 (26%), Positives = 88/203 (43%)
Query: 276 GKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG 335
G+D A + S + GF G V+ +A GG HS + G + +G GQ
Sbjct: 119 GRD-PATVPTSSTPVKIGGF---GGAVQQVAAGGLHSMALA-GGTVWAWGSNSAGQLALN 173
Query: 336 --STDDELSPNCVSSL-LGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAE 392
S+ +P V + L I + AG H+I +S + YA +
Sbjct: 174 PISSATRFAPRQVETAKLPIAPTAIVAGGSHSIAYTST-EAYAWGNNASGQLGNGTTLSN 232
Query: 393 TLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
+P+ + PS ++ + +S G H + G ++ WG N YGQLG G +++ P Q+
Sbjct: 233 HMPQKVQLPS--SITIRKISAGGSHNLALDSTGAIWAWGSNAYGQLGNGTTTNQSTPVQL 290
Query: 453 TIEGCVPR--NVACGWWHTLLLA 473
T+ V +V G H++ +A
Sbjct: 291 TLPAGVTGFIDVFAGPSHSVAVA 313
Score = 143 (55.4 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 44/157 (28%), Positives = 63/157 (40%)
Query: 305 IACGGRHSAVITDAGALLTFGWG--LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
I GG HS T A + WG GQ G G+T P V I I ++AG
Sbjct: 198 IVAGGSHSIAYTSTEA---YAWGNNASGQLGNGTTLSNHMPQKVQLPSSITIRKISAGGS 254
Query: 363 HTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIA 422
H + + S G ++A ++ P L P+ V G H+ +A
Sbjct: 255 HNLALDSTGAIWAWGSNAYGQLGNGTTTNQSTPVQLTLPAGVTGFI-DVFAGPSHSVAVA 313
Query: 423 DDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVP 459
+ V+ WG+N G L +G D+ P+QV VP
Sbjct: 314 SNFTVYTWGFNTLGLLSVGTTGDQLSPAQVRDASNVP 350
Score = 53 (23.7 bits), Expect = 7.1e-11, Sum P(2) = 7.1e-11
Identities = 23/80 (28%), Positives = 35/80 (43%)
Query: 55 GFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIP-EPFPLPTEASIVK----------A 103
GFA S + + + + G S G+I +P +PT ++ VK
Sbjct: 87 GFATGASHTLAIARFDNVS--GVRAWGSNSAGQIGRDPATVPTSSTPVKIGGFGGAVQQV 144
Query: 104 AAGWAHCVAVTEGGEVYTWG 123
AAG H +A+ GG V+ WG
Sbjct: 145 AAGGLHSMALA-GGTVWAWG 163
Score = 45 (20.9 bits), Expect = 4.8e-10, Sum P(2) = 4.8e-10
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 220 GVRIATVAAGGRHTLALS 237
G + VAAGG H++AL+
Sbjct: 138 GGAVQQVAAGGLHSMALA 155
Score = 37 (18.1 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 199 ESSSSGDENLS--AFPCLVTLNPGVRIATVAAGGRHTLALS 237
ES GD + A P + L + A G HTLA++
Sbjct: 59 ESGQLGDGTTTSAATPKRLRLGFATYSSGFATGASHTLAIA 99
>POMBASE|SPBC557.03c [details] [associations]
symbol:pim1 "Ran GDP/GTP exchange factor" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005087 "Ran guanyl-nucleotide exchange factor
activity" evidence=IGI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006406 "mRNA export from nucleus" evidence=IMP] [GO:0006407
"rRNA export from nucleus" evidence=ISO] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IMP] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IC] [GO:0007346 "regulation of
mitotic cell cycle" evidence=IMP] [GO:0030071 "regulation of
mitotic metaphase/anaphase transition" evidence=IMP] [GO:0031291
"Ran protein signal transduction" evidence=IGI] [GO:0032888
"regulation of mitotic spindle elongation" evidence=IMP]
[GO:0042992 "negative regulation of transcription factor import
into nucleus" evidence=IMP] [GO:0060623 "regulation of chromosome
condensation" evidence=IGI] [GO:1901673 "regulation of spindle
assembly involved in mitosis" evidence=IMP] PomBase:SPBC557.03c
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0051301 GO:GO:0030071
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0000790
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0006406
GO:GO:0090307 GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0007093 eggNOG:COG5184
GO:GO:0060623 GO:GO:0042992 GO:GO:0006407 GO:GO:0031291 EMBL:M73528
PIR:B40039 PIR:T50368 RefSeq:NP_596026.1 ProteinModelPortal:P28745
STRING:P28745 EnsemblFungi:SPBC557.03c.1 GeneID:2541059
KEGG:spo:SPBC557.03c HOGENOM:HOG000170207 OMA:KGIVYAW
OrthoDB:EOG466ZVF NextBio:20802173 Uniprot:P28745
Length = 539
Score = 147 (56.8 bits), Expect = 8.0e-11, Sum P(2) = 8.0e-11
Identities = 43/144 (29%), Positives = 64/144 (44%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ-IEGVAAGLWH 363
+A G H +T G + T+G G Q G+ + L ++ I V AG +H
Sbjct: 231 LATGTDHIIALTTTGKVYTWGNGQQFQLGRRMLERRRLQGLTPQPLALKNIISVGAGSYH 290
Query: 364 TICISSDGDVYAXXXXXXXXXXXXXDQAE-----TLPRLLDAPSLENVHSKSVSCGARHT 418
+ I + G VYA + E T P L+DA LE + KS++ G HT
Sbjct: 291 SFAIDNKGRVYAWGLNITRQCGIEVEDEEEGAVITKPTLVDA--LEGYNVKSITGGEHHT 348
Query: 419 AVIADDGKVFCWGWNKYGQLGLGD 442
+ +DG+V WG + QLG+ D
Sbjct: 349 LALLEDGRVLAWGRDDRHQLGIPD 372
Score = 132 (51.5 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 51/193 (26%), Positives = 78/193 (40%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE-----LSPNCVSSLLGIQIEGVAA 359
+ G HS I + G + +G + QCG D+E P V +L G ++ +
Sbjct: 284 VGAGSYHSFAIDNKGRVYAWGLNITRQCGIEVEDEEEGAVITKPTLVDALEGYNVKSITG 343
Query: 360 GLWHTICISSDGDVYAXXXXXXXXXXXXXDQA--ETLPR-------LLDAPS----LENV 406
G HT+ + DG V A D A ET+ + L P+ L NV
Sbjct: 344 GEHHTLALLEDGRVLAWGRDDRHQLGIP-DNALPETVVKDEKGNNYYLSTPTIIPGLTNV 402
Query: 407 HSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVI-DRNIPSQV---TIEGCVPRNV 462
V CG H + DGKV+ WG + ++G GD D +P+ V I+ R
Sbjct: 403 IQ--VVCGTHHNLAVTSDGKVYSWGSAENYEVGQGDNDEDVAVPTLVRSKAIKEVAIRVA 460
Query: 463 ACGWWHTLLLAVP 475
G +++ +P
Sbjct: 461 GAGGQFSIIAGIP 473
Score = 90 (36.7 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 25/67 (37%), Positives = 32/67 (47%)
Query: 59 AISDSRKLITWGS--TDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEG 116
AI+D+ TWG+ D Y S K P LP I + A G H +A+T
Sbjct: 188 AITDNGCCFTWGTFRCSDGVLGYSDSQKRTAEPTQMRLP---EICQLATGTDHIIALTTT 244
Query: 117 GEVYTWG 123
G+VYTWG
Sbjct: 245 GKVYTWG 251
Score = 87 (35.7 bits), Expect = 5.7e-10, Sum P(2) = 5.7e-10
Identities = 23/81 (28%), Positives = 38/81 (46%)
Query: 48 DVC--GGGCGFAMAISDSRKLITWGSTDD--LGQSYVTSGK-HGEIPEPFPLPTEASIVK 102
++C G +A++ + K+ TWG+ LG+ + + G P+P L +I+
Sbjct: 227 EICQLATGTDHIIALTTTGKVYTWGNGQQFQLGRRMLERRRLQGLTPQPLALK---NIIS 283
Query: 103 AAAGWAHCVAVTEGGEVYTWG 123
AG H A+ G VY WG
Sbjct: 284 VGAGSYHSFAIDNKGRVYAWG 304
Score = 79 (32.9 bits), Expect = 8.0e-11, Sum P(2) = 8.0e-11
Identities = 18/55 (32%), Positives = 26/55 (47%)
Query: 97 EASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTG--LDKDVFE 149
+ +V A G H A++ G VYTWG + GR+ D G +D D+ E
Sbjct: 107 KVGVVDLAVGGMHSAALSHDGRVYTWGVNDDYALGRLTKDQKDENGDKVDNDLLE 161
Score = 63 (27.2 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 24/93 (25%), Positives = 36/93 (38%)
Query: 48 DVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGE--------IPEPFPLPTEAS 99
D+ GG A A+S ++ TWG DD +T + E + E P E +
Sbjct: 112 DLAVGGMHSA-ALSHDGRVYTWGVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEGA 170
Query: 100 IVKAAAGWAHC-----VAVTEGGEVYTWGWKEC 127
+ C A+T+ G +TWG C
Sbjct: 171 LSHLRVTKVICSDNLTAAITDNGCCFTWGTFRC 203
Score = 41 (19.5 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 212 PCLVTLNPGVRIATVAAGGRHTLALS 237
P L T GV +A GG H+ ALS
Sbjct: 101 PILSTDKVGV--VDLAVGGMHSAALS 124
>RGD|1307558 [details] [associations]
symbol:Wbscr16 "Williams-Beuren syndrome chromosome region 16"
species:10116 "Rattus norvegicus" [GO:0005739 "mitochondrion"
evidence=IEA;ISO] RGD:1307558 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
EMBL:CH473973 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104312 CTD:81554 OMA:MVTLAKS
OrthoDB:EOG4F1X33 IPI:IPI00189798 RefSeq:NP_001101802.1
UniGene:Rn.40552 Ensembl:ENSRNOT00000002032 GeneID:360796
KEGG:rno:360796 UCSC:RGD:1307558 NextBio:674123 Uniprot:D4AE90
Length = 461
Score = 146 (56.5 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 56/209 (26%), Positives = 92/209 (44%)
Query: 275 YGKDRSAALSRGSVNSEGP--GFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YG 330
+G D L ++ S G + G V +A G ++ G + FGWG Y
Sbjct: 253 WGADGQTGLGHYNITSTPSKLGGDLAGVTVVQVATYGDCCLALSADGGV--FGWGNSEYL 310
Query: 331 QCGQGSTDDELS-PNCVSSLLGI-QIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXX 388
Q + +++ P C+ G+ +++ VA G ++ +G V+
Sbjct: 311 QLASVTDSTQVNVPRCLP-FSGVGKVKQVACGGTGCAILNEEGHVFVWGYGILGKGPNLS 369
Query: 389 DQA--ETLPRLLDAPSLENVHSK--SVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVI 444
+ A E +P L + N K + CG H A + + G++F WG N G LG+G +
Sbjct: 370 ETALPEMIPPTLFGLTEFNPEVKVSQIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLE 429
Query: 445 DRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
D+ P +VT+ G P +VACG H + LA
Sbjct: 430 DQYFPWRVTMPG-EPVDVACGVDHMVTLA 457
Score = 137 (53.3 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 44/167 (26%), Positives = 72/167 (43%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL--SPNCVSSLLGI--QIEGVAAG 360
++CG HS V+TD + + G +GQCG+ +DE+ + V + Q+ V G
Sbjct: 176 VSCGRAHSLVLTDREGVFSMGNNAHGQCGRKVVEDEVYSESHKVHRMQDFEGQVVQVVCG 235
Query: 361 LWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
H++ ++ G+VY+ + P L L V V+
Sbjct: 236 QDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPSKLGG-DLAGVTVVQVATYGDCCLA 294
Query: 421 IADDGKVFCWGWNKYGQLG-LGDVIDRNIPSQVTIEGCVP-RNVACG 465
++ DG VF WG ++Y QL + D N+P + G + VACG
Sbjct: 295 LSADGGVFGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGKVKQVACG 341
Score = 77 (32.2 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 26/100 (26%), Positives = 44/100 (44%)
Query: 30 ILSPLVVRLPLTVGSAWRDVCGGGCGFA--MAISDSRKLITWGST--DDLGQSYVTSGKH 85
+L P V LPL + V CG A + ++D + + G+ G+ V +
Sbjct: 155 VLEPSPVPLPLDRPQETK-VLQVSCGRAHSLVLTDREGVFSMGNNAHGQCGRKVVEDEVY 213
Query: 86 GEIPEPFPLPT-EASIVKAAAGWAHCVAVTEGGEVYTWGW 124
E + + E +V+ G H + +T+ GEVY+ GW
Sbjct: 214 SESHKVHRMQDFEGQVVQVVCGQDHSLFLTDKGEVYSCGW 253
Score = 63 (27.2 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 31/118 (26%), Positives = 51/118 (43%)
Query: 22 GALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSR-KLIT--WG---STDD- 74
G P+R + P+ RL L + CG+ + S+ K +T WG + D
Sbjct: 86 GLRPRRR--IQPVPYRLELD-----HKISSAACGYGFTLLSSKTKDVTKVWGMGLNKDSQ 138
Query: 75 LG----QSYVTSGKHGEI-PEPFPLPT----EASIVKAAAGWAHCVAVTEGGEVYTWG 123
LG + T G + P P PLP E +++ + G AH + +T+ V++ G
Sbjct: 139 LGFHRSRKDKTRGYEYVLEPSPVPLPLDRPQETKVLQVSCGRAHSLVLTDREGVFSMG 196
>ZFIN|ZDB-GENE-090311-7 [details] [associations]
symbol:si:ch211-281g13.5 "si:ch211-281g13.5"
species:7955 "Danio rerio" [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-090311-7 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
eggNOG:COG5021 HOGENOM:HOG000208452 HOVERGEN:HBG050878
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00899041
RefSeq:NP_001139103.1 UniGene:Dr.155114 Ensembl:ENSDART00000113315
GeneID:100148091 OMA:TLAWFPS NextBio:20791722 Uniprot:B8A4S7
Length = 992
Score = 189 (71.6 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 50/169 (29%), Positives = 79/169 (46%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCG-QGSTDDELSPNCVSSLLGIQIEGVAAGLWH 363
IACG +HS +++ G L +G +GQ G + SP + SL I + ++AG H
Sbjct: 120 IACGDQHSMALSNDGQLFVWGENTHGQLGLRKEQAGTQSPQHLQSLCEIPVAQISAGGNH 179
Query: 364 TICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
+ +S G V+ + +P ++ SL + S+SCG HTA ++
Sbjct: 180 SFVLSLSGVVFGWGSNSAGQLGLGDTKDRFVPTIVK--SLCGKKTVSISCGGEHTATLSK 237
Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLL 471
G VF +G +GQLG + D + P + + G V CG HTL+
Sbjct: 238 GGTVFTFGSGGFGQLGHNSLKDEHHPRLIAELWGSKVSQVTCGRHHTLV 286
Score = 185 (70.2 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 49/156 (31%), Positives = 72/156 (46%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLY--GQCGQGSTDDELSPNCVSSLLGIQIEGVAA 359
V I+ GG HS V++ +G + FGWG GQ G G T D P V SL G + ++
Sbjct: 170 VAQISAGGNHSFVLSLSGVV--FGWGSNSAGQLGLGDTKDRFVPTIVKSLCGKKTVSISC 227
Query: 360 GLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
G HT +S G V+ + E PRL+ L V+CG HT
Sbjct: 228 GGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLI--AELWGSKVSQVTCGRHHTL 285
Query: 420 VIADDGK-VFCWGWNKYGQLGLGDVIDRNIPSQVTI 454
V + K ++ +G GQLG G+ + +++P V +
Sbjct: 286 VFEESSKLIYSFGCGMQGQLGNGEQVKQSVPLPVLL 321
Score = 160 (61.4 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 43/130 (33%), Positives = 67/130 (51%)
Query: 346 VSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETL-PRLLDAPSLE 404
+ SL Q+ +A G H++ +S+DG ++ +QA T P+ L SL
Sbjct: 109 LKSLENRQVIQIACGDQHSMALSNDGQLFVWGENTHGQLGLRKEQAGTQSPQHLQ--SLC 166
Query: 405 NVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVA 463
+ +S G H+ V++ G VF WG N GQLGLGD DR +P+ V ++ G +++
Sbjct: 167 EIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTKDRFVPTIVKSLCGKKTVSIS 226
Query: 464 CGWWHTLLLA 473
CG HT L+
Sbjct: 227 CGGEHTATLS 236
Score = 135 (52.6 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 35/123 (28%), Positives = 52/123 (42%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
G I+CGG H+A ++ G + TFG G +GQ G S DE P ++ L G ++ V
Sbjct: 219 GKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLIAELWGSKVSQVT 278
Query: 359 AGLWHTICISSDGD-VYAXXXXXXXXXXXXXD--QAETLPRLLDAPSLENVHSKSVSCGA 415
G HT+ +Y+ Q+ LP LL E K ++ G
Sbjct: 279 CGRHHTLVFEESSKLIYSFGCGMQGQLGNGEQVKQSVPLPVLLPTECTEFTMEKLIT-GE 337
Query: 416 RHT 418
H+
Sbjct: 338 HHS 340
Score = 75 (31.5 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 22/80 (27%), Positives = 36/80 (45%)
Query: 47 RDVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHG-EIPEPFPLPTEASIVKA 103
R V CG +MA+S+ +L WG GQ + + G + P+ E + +
Sbjct: 115 RQVIQIACGDQHSMALSNDGQLFVWGENTH-GQLGLRKEQAGTQSPQHLQSLCEIPVAQI 173
Query: 104 AAGWAHCVAVTEGGEVYTWG 123
+AG H ++ G V+ WG
Sbjct: 174 SAGGNHSFVLSLSGVVFGWG 193
Score = 44 (20.5 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 221 VRIATVAAGGRHTLALS 237
+ +A ++AGG H+ LS
Sbjct: 168 IPVAQISAGGNHSFVLS 184
Score = 39 (18.8 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 6/17 (35%), Positives = 13/17 (76%)
Query: 222 RIATVAAGGRHTLALSD 238
++ +A G +H++ALS+
Sbjct: 116 QVIQIACGDQHSMALSN 132
>MGI|MGI:2137600 [details] [associations]
symbol:Wbscr16 "Williams-Beuren syndrome chromosome region
16 homolog (human)" species:10090 "Mus musculus" [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=NAS]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0050790 "regulation
of catalytic activity" evidence=NAS] MGI:MGI:2137600
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104312 CTD:81554 HOGENOM:HOG000232125
HOVERGEN:HBG054246 OMA:MVTLAKS OrthoDB:EOG4F1X33 EMBL:AK017733
EMBL:BC024714 EMBL:BC055335 IPI:IPI00111460 RefSeq:NP_291050.1
UniGene:Mm.29508 ProteinModelPortal:Q9CYF5 SMR:Q9CYF5 STRING:Q9CYF5
PhosphoSite:Q9CYF5 PRIDE:Q9CYF5 Ensembl:ENSMUST00000076228
GeneID:94254 KEGG:mmu:94254 InParanoid:Q9CYF5 NextBio:352275
Bgee:Q9CYF5 Genevestigator:Q9CYF5 GermOnline:ENSMUSG00000061979
Uniprot:Q9CYF5
Length = 461
Score = 147 (56.8 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 56/209 (26%), Positives = 93/209 (44%)
Query: 275 YGKDRSAALSRGSVNSEGP--GFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YG 330
+G D L ++ S G + G V +A G ++ G + FGWG Y
Sbjct: 253 WGADGQTGLGHYNITSTPSKLGGDLAGVTVVQVATYGDCCLALSADGGV--FGWGNSEYL 310
Query: 331 QCGQGSTDDELS-PNCVSSLLGI-QIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXX 388
Q + +++ P C+ G+ +++ VA G ++++G V+
Sbjct: 311 QLASVTDSTQVNVPRCLP-FSGVGKVKQVACGGTGCAVLNAEGHVFVWGYGILGKGPKLL 369
Query: 389 DQA--ETLPRLLDAPSLEN--VHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVI 444
+ A E +P L + N V + CG H A + + G++F WG N G LG+G +
Sbjct: 370 ETAIPEMIPPTLFGLTEFNPEVQVSQIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLE 429
Query: 445 DRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
D+ P +VT+ G P +VACG H + LA
Sbjct: 430 DQYFPWRVTMPG-EPVDVACGVDHMVTLA 457
Score = 136 (52.9 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 44/167 (26%), Positives = 72/167 (43%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL--SPNCVSSLLGI--QIEGVAAG 360
++CG HS V+TD + + G +GQCG+ +DE+ + V + Q+ V G
Sbjct: 176 VSCGRAHSLVLTDREGVFSMGNNSHGQCGRKVVEDEVYSESHKVHRMQDFDGQVVQVVCG 235
Query: 361 LWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
H++ ++ G+VY+ + P L L V V+
Sbjct: 236 QDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPSKLGG-DLAGVTVVQVATYGDCCLA 294
Query: 421 IADDGKVFCWGWNKYGQLG-LGDVIDRNIPSQVTIEGCVP-RNVACG 465
++ DG VF WG ++Y QL + D N+P + G + VACG
Sbjct: 295 LSADGGVFGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGKVKQVACG 341
Score = 75 (31.5 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 25/100 (25%), Positives = 44/100 (44%)
Query: 30 ILSPLVVRLPLTVGSAWRDVCGGGCGFA--MAISDSRKLITWGSTD--DLGQSYVTSGKH 85
+L P V LPL + V CG A + ++D + + G+ G+ V +
Sbjct: 155 VLEPSPVPLPLDRPQETK-VLQVSCGRAHSLVLTDREGVFSMGNNSHGQCGRKVVEDEVY 213
Query: 86 GEIPEPFPLPT-EASIVKAAAGWAHCVAVTEGGEVYTWGW 124
E + + + +V+ G H + +T+ GEVY+ GW
Sbjct: 214 SESHKVHRMQDFDGQVVQVVCGQDHSLFLTDKGEVYSCGW 253
Score = 63 (27.2 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 31/118 (26%), Positives = 51/118 (43%)
Query: 22 GALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSR-KLIT--WG---STDD- 74
G P+R + P+ RL L + CG+ + S+ K +T WG + D
Sbjct: 86 GLRPRRR--IQPVPYRLELD-----HKISSAACGYGFTLLSSKTKDVTKVWGMGLNKDSQ 138
Query: 75 LG----QSYVTSGKHGEI-PEPFPLPT----EASIVKAAAGWAHCVAVTEGGEVYTWG 123
LG + T G + P P PLP E +++ + G AH + +T+ V++ G
Sbjct: 139 LGFHRSRKDKTRGYEYVLEPSPVPLPLDRPQETKVLQVSCGRAHSLVLTDREGVFSMG 196
>UNIPROTKB|G3V1B4 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CH471064 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 PANTHER:PTHR22870:SF7 UniGene:Hs.32470
HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058 EMBL:AC124078
ProteinModelPortal:G3V1B4 SMR:G3V1B4 Ensembl:ENST00000525422
ArrayExpress:G3V1B4 Bgee:G3V1B4 Uniprot:G3V1B4
Length = 354
Score = 145 (56.1 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 46/135 (34%), Positives = 57/135 (42%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDD--ELSPNCVSSLLGIQIEGVAA 359
V+ I GG HSAV+TD G L G GQ G G T+D +P C SL G I+ VA
Sbjct: 51 VRRITGGGGHSAVVTDGGDLFVCGLNKDGQLGLGHTEDIPYFTP-C-KSLFGCPIQQVAC 108
Query: 360 GLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSC---GAR 416
G TI ++ +G V + PR P +H + V C G R
Sbjct: 109 GWDFTIMLTENGQVLSCGSNSFGQLGVPHG-----PRRCVVPQAIELHKEKVVCIAAGLR 163
Query: 417 HTAVIADDGKVFCWG 431
H G VF WG
Sbjct: 164 HAVAATASGIVFQWG 178
Score = 144 (55.7 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 47/177 (26%), Positives = 78/177 (44%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE-LSPNCVSSLLGIQIEGVAAG 360
++ +ACG + ++T+ G +L+ G +GQ G + P + L ++ +AAG
Sbjct: 103 IQQVACGWDFTIMLTENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIE-LHKEKVVCIAAG 161
Query: 361 LWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDA--PS----LENVHSKSVSCG 414
L H + ++ G V+ +TLP A PS LEN + V G
Sbjct: 162 LRHAVAATASGIVFQWGTGLASCGRRLCP-GQTLPLFFTAKEPSRVTGLENSKAMCVLAG 220
Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVAC---GWWH 468
+ H+A + D G+V+ WG NK+GQL + +P ++ V GW H
Sbjct: 221 SDHSASLTDAGEVYVWGSNKHGQLA-NEAAFLPVPQKIEAHCFQNEKVTAIWSGWTH 276
Score = 120 (47.3 bits), Expect = 0.00020, P = 0.00020
Identities = 28/67 (41%), Positives = 39/67 (58%)
Query: 409 KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV---TIEGCVPRNVACG 465
+ ++ G H+AV+ D G +F G NK GQLGLG D IP ++ GC + VACG
Sbjct: 52 RRITGGGGHSAVVTDGGDLFVCGLNKDGQLGLGHTED--IPYFTPCKSLFGCPIQQVACG 109
Query: 466 WWHTLLL 472
W T++L
Sbjct: 110 WDFTIML 116
Score = 120 (47.3 bits), Expect = 0.00020, P = 0.00020
Identities = 32/124 (25%), Positives = 54/124 (43%)
Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ-IEGVAAGLWHTICISSDGDVYAX 376
A AL +G YGQ G G +D L P ++ + + + G H+ ++ GD++
Sbjct: 14 AAALFAWGANSYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTDGGDLFVC 73
Query: 377 XXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYG 436
E +P SL + V+CG T ++ ++G+V G N +G
Sbjct: 74 GLNKDGQLGLG--HTEDIPYFTPCKSLFGCPIQQVACGWDFTIMLTENGQVLSCGSNSFG 131
Query: 437 QLGL 440
QLG+
Sbjct: 132 QLGV 135
Score = 117 (46.2 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 41/145 (28%), Positives = 63/145 (43%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQ----GST----DDELSPNCVSSLLGIQIEG 356
IA G RH+ T +G + +G GL CG+ G T P+ V+ L +
Sbjct: 158 IAAGLRHAVAATASGIVFQWGTGL-ASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMC 216
Query: 357 VAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLP--RLLDAPSLENVHSKSVSCG 414
V AG H+ ++ G+VY ++A LP + ++A +N ++ G
Sbjct: 217 VLAGSDHSASLTDAGEVYVWGSNKHGQLA---NEAAFLPVPQKIEAHCFQNEKVTAIWSG 273
Query: 415 ARHTAVIADDGKVFCWGWNKYGQLG 439
H + GK+F WG YGQLG
Sbjct: 274 WTHLVAQTETGKMFTWGRADYGQLG 298
Score = 74 (31.1 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 31/115 (26%), Positives = 48/115 (41%)
Query: 14 VFMWG---YLPGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWG 70
+F WG Y L + +L P + + R + GGG G + ++D L G
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLLPQQLN-DFCKPRSVRRITGGG-GHSAVVTDGGDLFVCG 74
Query: 71 STDDLGQSYVTSGKHGEIPEPFPLPT--EASIVKAAAGWAHCVAVTEGGEVYTWG 123
D GQ + G +IP P + I + A GW + +TE G+V + G
Sbjct: 75 LNKD-GQ--LGLGHTEDIPYFTPCKSLFGCPIQQVACGWDFTIMLTENGQVLSCG 126
>ZFIN|ZDB-GENE-070402-2 [details] [associations]
symbol:als2a "amyotrophic lateral sclerosis 2a
(juvenile)" species:7955 "Danio rerio" [GO:0035023 "regulation of
Rho protein signal transduction" evidence=IEA] [GO:0005089 "Rho
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0043025 "neuronal
cell body" evidence=ISS] [GO:0030425 "dendrite" evidence=ISS]
[GO:0005769 "early endosome" evidence=ISS] [GO:0016197 "endosomal
transport" evidence=ISS] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=ISS] [GO:0005813 "centrosome" evidence=ISS]
[GO:0014069 "postsynaptic density" evidence=ISS] [GO:0007528
"neuromuscular junction development" evidence=ISS] [GO:0030424
"axon" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043197 "dendritic spine" evidence=ISS] [GO:0007409
"axonogenesis" evidence=ISS] [GO:0016050 "vesicle organization"
evidence=ISS] [GO:0017137 "Rab GTPase binding" evidence=ISS]
[GO:0017112 "Rab guanyl-nucleotide exchange factor activity"
evidence=ISS] InterPro:IPR000219 Pfam:PF00621 PROSITE:PS50010
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 ZFIN:ZDB-GENE-070402-2
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:BK005193
UniGene:Dr.102729 ProteinModelPortal:I7L9G3 Uniprot:I7L9G3
Length = 1590
Score = 121 (47.7 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 33/81 (40%), Positives = 43/81 (53%)
Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR-NIPSQVTI---EGC 457
+L H SVS G+ H + + +DG V WG N YGQ G+ DR P+ VT+ E
Sbjct: 76 TLSGQHVISVSAGSYHCSAVTEDGLVLMWGENSYGQCGVSGT-DRVPSPTPVTVVDDETH 134
Query: 458 VPR-----NVACGWWHTLLLA 473
P+ NVACG HTL L+
Sbjct: 135 PPQLVRVLNVACGAQHTLALS 155
Score = 111 (44.1 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 26/84 (30%), Positives = 44/84 (52%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG------- 351
G +V ++ G H + +T+ G +L +G YGQCG TD SP V+ +
Sbjct: 79 GQHVISVSAGSYHCSAVTEDGLVLMWGENSYGQCGVSGTDRVPSPTPVTVVDDETHPPQL 138
Query: 352 IQIEGVAAGLWHTICISSDGDVYA 375
+++ VA G HT+ +S+ +V+A
Sbjct: 139 VRVLNVACGAQHTLALSNKHEVWA 162
Score = 109 (43.4 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 30/83 (36%), Positives = 43/83 (51%)
Query: 394 LPRL--LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
LPRL L SL ++ GA H+ + +V+ WG K+GQLG + +P+
Sbjct: 539 LPRLQPLCIKSLSKKEVVKITAGANHSLALTAQCQVYSWGSEKFGQLGRMNS-PSTVPNL 597
Query: 452 VTI-EGCVPRNVACGWWHTLLLA 473
T+ +G +VA G HTLLLA
Sbjct: 598 TTVSDGIRVWDVAAGQTHTLLLA 620
Score = 92 (37.4 bits), Expect = 0.00047, Sum P(3) = 0.00047
Identities = 23/70 (32%), Positives = 38/70 (54%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
I G HS +T + ++G +GQ G+ ++ + PN + GI++ VAAG HT
Sbjct: 558 ITAGANHSLALTAQCQVYSWGSEKFGQLGRMNSPSTV-PNLTTVSDGIRVWDVAAGQTHT 616
Query: 365 ICISSDGDVY 374
+ ++ DGD Y
Sbjct: 617 LLLA-DGDCY 625
Score = 91 (37.1 bits), Expect = 0.00016, Sum P(4) = 0.00016
Identities = 25/101 (24%), Positives = 44/101 (43%)
Query: 323 TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXX 382
++G G GQ G G L P C+ SL ++ + AG H++ +++ VY+
Sbjct: 524 SWGKGHEGQLGHGDYLPRLQPLCIKSLSKKEVVKITAGANHSLALTAQCQVYSWGSEKFG 583
Query: 383 XXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
+ T+P L + + V+ G HT ++AD
Sbjct: 584 QLGRM-NSPSTVPNLTTVS--DGIRVWDVAAGQTHTLLLAD 621
Score = 70 (29.7 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 19/51 (37%), Positives = 26/51 (50%)
Query: 89 PEPFPLPTEAS-----IVKAAAGWAHCVAVTEGGEVYTWG---WKECVPSG 131
P P L E++ ++ +AG HC AVTE G V WG + +C SG
Sbjct: 66 PPPASLVLESTLSGQHVISVSAGSYHCSAVTEDGLVLMWGENSYGQCGVSG 116
Score = 67 (28.6 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 32/119 (26%), Positives = 50/119 (42%)
Query: 14 VFMWGYLPGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTD 73
V+ +G P P P S LV+ L+ G V G A+++ ++ WG +
Sbjct: 53 VYSFGEQPWK-PVEPPPAS-LVLESTLS-GQHVISVSAGSY-HCSAVTEDGLVLMWGE-N 107
Query: 74 DLGQSYVTSGKHGEIPEPFPL---------PTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
GQ V SG +P P P+ P ++ A G H +A++ EV+ WG
Sbjct: 108 SYGQCGV-SGTD-RVPSPTPVTVVDDETHPPQLVRVLNVACGAQHTLALSNKHEVWAWG 164
Score = 63 (27.2 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 16/67 (23%), Positives = 33/67 (49%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL-SPNCVSSLLGIQIEGVAAG 360
V +ACG +H+ +++ + + WG Q G + + P V L+G + +A G
Sbjct: 141 VLNVACGAQHTLALSNKHEV--WAWGSGCQLGLVTNVFPVWKPQKVEHLVGRYVVQIACG 198
Query: 361 LWHTICI 367
+H++ +
Sbjct: 199 AFHSLAL 205
Score = 62 (26.9 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 91 PFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG---WKECVP 129
P L ++ AA G H + + EGG+VY++G WK P
Sbjct: 25 PEKLLLSRPVLHAALGSLHGLLLIEGGQVYSFGEQPWKPVEP 66
Score = 56 (24.8 bits), Expect = 2.0e-06, Sum P(4) = 2.0e-06
Identities = 11/18 (61%), Positives = 14/18 (77%)
Query: 221 VRIATVAAGGRHTLALSD 238
VR+ VA G +HTLALS+
Sbjct: 139 VRVLNVACGAQHTLALSN 156
Score = 52 (23.4 bits), Expect = 7.1e-05, Sum P(3) = 7.1e-05
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 426 KVFCWGWNKYGQLGLGDVIDRNIP 449
+V+ WG GQLG GD + R P
Sbjct: 521 EVWSWGKGHEGQLGHGDYLPRLQP 544
Score = 46 (21.3 bits), Expect = 2.0e-06, Sum P(4) = 2.0e-06
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 299 GNYVKGIACGGRHSAVI 315
G YV IACG HS +
Sbjct: 189 GRYVVQIACGAFHSLAL 205
>ZFIN|ZDB-GENE-020509-1 [details] [associations]
symbol:nek8 "NIMA (never in mitosis gene a)-related
kinase 8" species:7955 "Danio rerio" [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0061326 "renal tubule development" evidence=IMP]
[GO:0072116 "pronephros formation" evidence=IGI] [GO:0072372
"primary cilium" evidence=IDA] [GO:0001947 "heart looping"
evidence=IGI] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-020509-1 GO:GO:0005524 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0072372 GO:GO:0001947 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 KO:K08857 EMBL:AF407580
IPI:IPI00770181 RefSeq:NP_620776.1 UniGene:Dr.12587
ProteinModelPortal:Q90XC2 GeneID:171094 KEGG:dre:171094 CTD:284086
HOGENOM:HOG000006908 HOVERGEN:HBG098799 InParanoid:Q90XC2
NextBio:20797120 ArrayExpress:Q90XC2 GO:GO:0072116 GO:GO:0061326
Uniprot:Q90XC2
Length = 697
Score = 176 (67.0 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 37/152 (24%), Positives = 74/152 (48%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
G +K ++CG + +TD G ++TFG G G G G+ +D P V +LLG ++ V+
Sbjct: 397 GVTIKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHGNFNDVTQPKIVEALLGYELVQVS 456
Query: 359 AGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
G H + ++++ +V++ + P+ + P+ + ++ V CG +
Sbjct: 457 CGASHVLAVTNEREVFSWGRGDNGRLGLATQDSHNCPQQVSLPA--DFEAQRVLCGVDCS 514
Query: 419 AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
+++ ++ G N++ +LGL V PS
Sbjct: 515 MIMSTQHQILACGNNRFNKLGLDKVSGTEEPS 546
Score = 139 (54.0 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 51/209 (24%), Positives = 86/209 (41%)
Query: 266 HPIPCIES-SYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTF 324
HP+P ++G S L +N+E V ++ G +T +G L+T+
Sbjct: 315 HPLPLFSVYTWGSGISTPLRLPMLNTE----------VIQVSLGRTQKMGVTKSGRLITW 364
Query: 325 GWGLYGQCGQGSTD---DELSPNCVSSLL----GIQIEGVAAGLWHTICISSDGDVYAXX 377
G G+ + +++ P +S L G+ I+ V+ G T C++ G +
Sbjct: 365 EAPSVGS-GEPTLPGAVEQMQPQFISRFLEGQSGVTIKSVSCGDLFTTCLTDRGIIMTFG 423
Query: 378 XXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQ 437
T P++++A L VSCGA H + ++ +VF WG G+
Sbjct: 424 SGSNGCLGHGNFNDVTQPKIVEA--LLGYELVQVSCGASHVLAVTNEREVFSWGRGDNGR 481
Query: 438 LGLGDVIDRNIPSQVTIEGCVP-RNVACG 465
LGL N P QV++ + V CG
Sbjct: 482 LGLATQDSHNCPQQVSLPADFEAQRVLCG 510
Score = 94 (38.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 25/70 (35%), Positives = 33/70 (47%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
I G HS +T+ G TFG +GQ G P VS L GI + A G T
Sbjct: 573 IDIGTAHSVAVTEKGQCFTFGSNQHGQLGCSHRRSSRVPYQVSGLQGITM--AACGDAFT 630
Query: 365 ICISSDGDVY 374
+ I ++G+VY
Sbjct: 631 LAIGAEGEVY 640
Score = 83 (34.3 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 29/120 (24%), Positives = 49/120 (40%)
Query: 360 GLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
G H++ ++ G + ++ +P L+ + +CG T
Sbjct: 576 GTAHSVAVTEKGQCFTFGSNQHGQLGCSHRRSSRVP--YQVSGLQGI--TMAACGDAFTL 631
Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE---GCVPRNVACGWWHTLLLAVPP 476
I +G+V+ WG G+LG + D IP V ++ +VAC +TLL AV P
Sbjct: 632 AIGAEGEVYTWGKGARGRLGRKEE-DFGIPKPVQLDESHAFTVTSVACCHGNTLL-AVKP 689
Score = 83 (34.3 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 39/130 (30%), Positives = 56/130 (43%)
Query: 11 ERVVFMWGYLPGA---LPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLI 67
ER VF WG L + P V LP A R +CG C +M +S +++
Sbjct: 468 EREVFSWGRGDNGRLGLATQDSHNCPQQVSLPADF-EAQRVLCGVDC--SMIMSTQHQIL 524
Query: 68 TWGST--DDLGQSYVTSGKHG------------EIPEPFPLPTEASIVKAAAGWAHCVAV 113
G+ + LG V+ + ++ + PL TE IV G AH VAV
Sbjct: 525 ACGNNRFNKLGLDKVSGTEEPSSFCQVEEVHLFQLVQSAPLNTE-KIVYIDIGTAHSVAV 583
Query: 114 TEGGEVYTWG 123
TE G+ +T+G
Sbjct: 584 TEKGQCFTFG 593
Score = 79 (32.9 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 31/108 (28%), Positives = 49/108 (45%)
Query: 20 LPGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCG--FAMAISDSRKLITWGSTDD--L 75
LPGA+ Q P + R G + + CG F ++D ++T+GS + L
Sbjct: 376 LPGAVEQMQP---QFISRF--LEGQSGVTIKSVSCGDLFTTCLTDRGIIMTFGSGSNGCL 430
Query: 76 GQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
G +I E L E +V+ + G +H +AVT EV++WG
Sbjct: 431 GHGNFNDVTQPKIVEAL-LGYE--LVQVSCGASHVLAVTNEREVFSWG 475
Score = 48 (22.0 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 10/36 (27%), Positives = 17/36 (47%)
Query: 88 IPEPFPLPT-EASIVKAAAGWAHCVAVTEGGEVYTW 122
I P LP +++ + G + VT+ G + TW
Sbjct: 329 ISTPLRLPMLNTEVIQVSLGRTQKMGVTKSGRLITW 364
>UNIPROTKB|Q74DR4 [details] [associations]
symbol:GSU1251 "ATS1 domain repeat protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Gene3D:2.60.40.360 InterPro:IPR008962 InterPro:IPR011040
SUPFAM:SSF50939 RefSeq:NP_952304.1 ProteinModelPortal:Q74DR4
GeneID:2688149 KEGG:gsu:GSU1251 PATRIC:22025273
HOGENOM:HOG000144307 OMA:QADGTLW
BioCyc:GSUL243231:GH27-1279-MONOMER Uniprot:Q74DR4
Length = 2082
Score = 158 (60.7 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 49/170 (28%), Positives = 77/170 (45%)
Query: 276 GKDRSAALSRGS-VNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
G ++ L G+ +N P +VPG + K +A G HS I G+L +G L+GQ GQ
Sbjct: 57 GSNQFGQLGDGTGINRTSP-VQVPGTW-KTVAAGTTHSLGIKADGSLWAWGSNLFGQLGQ 114
Query: 335 GSTDDELSPNCVSSL-LGIQIEGVA--AGLWHTICISSDGDVYAXXXXXXXXXXXXXDQA 391
+ +L+ N S + +G + VA AG + + DG +++ +
Sbjct: 115 PLVNGQLATNKFSPIRIGTGNDWVAVSAGELTSFGLKGDGTLWSWGNNLFGELGDGTTVS 174
Query: 392 ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
P + A L N +V+ G H + DG ++ WG N GQLG G
Sbjct: 175 RPQPVQVVADPLSNGRYVAVAAGGEHALALQADGTLWAWGANLTGQLGTG 224
Score = 153 (58.9 bits), Expect = 6.1e-10, Sum P(3) = 6.1e-10
Identities = 46/170 (27%), Positives = 75/170 (44%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE--G 356
G YV +A GG H+ + G L +G L GQ G G T + PN +G +
Sbjct: 189 GRYV-AVAAGGEHALALQADGTLWAWGANLTGQLGTGGTG--ILPNPTPLKIGTDRDWTA 245
Query: 357 VAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRL-LDAPSLENVHSK--SVSC 413
++AG H++ + +DG +++ LP + P+ S +++
Sbjct: 246 ISAGEMHSVALKADGSLWSWGQNLFGELG----NGVALPGANVTTPTRVGTGSDWVAIAA 301
Query: 414 GARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVA 463
GA HT + +G V WG N G +G G V +R+ P+ + + NVA
Sbjct: 302 GALHTVALHRNGTVSAWGNNAQGAVGDGTVANRSTPTLIVAPVTLVNNVA 351
Score = 144 (55.7 bits), Expect = 1.8e-10, Sum P(3) = 1.8e-10
Identities = 47/199 (23%), Positives = 81/199 (40%)
Query: 273 SSYGKDRSAALSRGSV-NSEGPGFRV-PGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
S++G + A+ G+V N P V P V +A + FGWG G
Sbjct: 316 SAWGNNAQGAVGDGTVANRSTPTLIVAPVTLVNNVAIAAGTGVSFSVLANGTVFGWGGNG 375
Query: 331 --QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXX 388
Q G G+ +P +S+ + GV G ++ + S+G ++A
Sbjct: 376 AGQLGNGTFGAVTAPTVLSAGASAWL-GVEPGGAFSLGLRSNGTLWAWGGNASGQLG--- 431
Query: 389 DQAETLPRLLDAPSLENVHS-KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
T P + P + + ++ + G H+ + DG ++ WG N GQLG+G + +
Sbjct: 432 -DGTTTPSAIPVPVVGGAGNWRTTATGTAHSVAVRADGTLWAWGDNSSGQLGIGSTVAAS 490
Query: 448 IPSQVTIEGCVPRNVACGW 466
P Q+T+ P + W
Sbjct: 491 TPQQITVTN--PASAGNDW 507
Score = 137 (53.3 bits), Expect = 1.1e-09, Sum P(3) = 1.1e-09
Identities = 48/184 (26%), Positives = 79/184 (42%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
IA G H + G L +G GQ G G T +P V + G+ +AAG H+
Sbjct: 630 IAAGQDHGLSLQADGTLWAWGANSVGQLGNGVTTATFTPVQVINAEGVPYVSLAAGTSHS 689
Query: 365 ICISSDGDVYAXXXXXXXXXXXX-----XD----QAETLP-RLLDAPSLENVHSKSVS-C 413
+ SDG ++A D Q T+P R+L + + V+
Sbjct: 690 LAGRSDGTLWAWGNNTSGQLGTGPHPGDADPLNPQPHTVPARILTSNPVSAADDWLVATA 749
Query: 414 GARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
G H+A + +G ++ WG N GQLG G + +IP+ + +E + + A + +
Sbjct: 750 GGSHSAALKSNGTLWTWGQNTSGQLGNGTTTEADIPTAL-LEPRISVSPASLAFGPAPIG 808
Query: 474 VPPT 477
+PP+
Sbjct: 809 IPPS 812
Score = 114 (45.2 bits), Expect = 3.2e-07, Sum P(3) = 3.2e-07
Identities = 51/187 (27%), Positives = 76/187 (40%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGS-TDDELSP-NCVSSLLGI---Q 353
GN +A GG HS + G L ++G +GQ G G+ T + +P V+ G
Sbjct: 504 GNDWTAVAGGGAHSLGLKADGTLWSWGDNTFGQLGDGTGTSNRTTPVQIVTGNPGNFDRN 563
Query: 354 IEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXX------XDQAETLPRLLDA--PSLE- 404
VAAG ++ + +DG ++ Q +L A PS
Sbjct: 564 WVAVAAGGVFSLALQADGTIWTWGDNSLLQLGTDPAMLTPATQRNVPAQLAVASPPSTAF 623
Query: 405 NVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVA 463
N +++ G H + DG ++ WG N GQLG G P QV EG ++A
Sbjct: 624 NSSWVAIAAGQDHGLSLQADGTLWAWGANSVGQLGNGVTTATFTPVQVINAEGVPYVSLA 683
Query: 464 CGWWHTL 470
G H+L
Sbjct: 684 AGTSHSL 690
Score = 106 (42.4 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 48/210 (22%), Positives = 78/210 (37%)
Query: 274 SYGKDRSAALSRGSVNSEGPGFRVPGNYVKG-----IACGGRHSAVITDAGALLTFGWGL 328
S+G++ L G V G P G IA G H+ + G + +G
Sbjct: 264 SWGQNLFGELGNG-VALPGANVTTPTRVGTGSDWVAIAAGALHTVALHRNGTVSAWGNNA 322
Query: 329 YGQCGQGSTDDELSPNC-VSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXX 387
G G G+ + +P V+ + + +AAG + + ++G V+
Sbjct: 323 QGAVGDGTVANRSTPTLIVAPVTLVNNVAIAAGTGVSFSVLANGTVFGWGGNGAGQLGNG 382
Query: 388 XDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
A T P +L A + + V G + + +G ++ WG N GQLG G
Sbjct: 383 TFGAVTAPTVLSAGASAWL---GVEPGGAFSLGLRSNGTLWAWGGNASGQLGDGTTTPSA 439
Query: 448 IPSQVTIEGCVPRNVACGWWHTLLLAVPPT 477
IP V R A G H++ + T
Sbjct: 440 IPVPVVGGAGNWRTTATGTAHSVAVRADGT 469
Score = 101 (40.6 bits), Expect = 1.8e-10, Sum P(3) = 1.8e-10
Identities = 41/141 (29%), Positives = 65/141 (46%)
Query: 9 KMERVVFMWGY-LPGALPQRSPILSPLVVRL---PLTVGSAWRDVCGGGCGFAMAISDSR 64
K + ++ WG L G L + + P V++ PL+ G + V GG A+A+
Sbjct: 151 KGDGTLWSWGNNLFGELGDGTTVSRPQPVQVVADPLSNGR-YVAVAAGG-EHALALQADG 208
Query: 65 KLITWGSTDDLGQSYVTSGKHGEIPEPFPLP--TEASIVKAAAGWAHCVAVTEGGEVYTW 122
L WG+ + GQ + +G G +P P PL T+ +AG H VA+ G +++W
Sbjct: 209 TLWAWGA-NLTGQ--LGTGGTGILPNPTPLKIGTDRDWTAISAGEMHSVALKADGSLWSW 265
Query: 123 GWKECVPSGRVFGDLSTGTGL 143
G +FG+L G L
Sbjct: 266 GQN-------LFGELGNGVAL 279
Score = 86 (35.3 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 26/94 (27%), Positives = 41/94 (43%)
Query: 34 LVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHG--EIP 89
+ V P + G+ W V GGG ++ + L +WG LG TS + +I
Sbjct: 495 ITVTNPASAGNDWTAVAGGGA-HSLGLKADGTLWSWGDNTFGQLGDGTGTSNRTTPVQIV 553
Query: 90 EPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
P + + V AAG +A+ G ++TWG
Sbjct: 554 TGNPGNFDRNWVAVAAGGVFSLALQADGTIWTWG 587
Score = 86 (35.3 bits), Expect = 3.4e-08, Sum P(3) = 3.4e-08
Identities = 34/114 (29%), Positives = 44/114 (38%)
Query: 14 VFMWGYLPGALPQRSPILSPLVVRLPLTVG-SAWRDVCGGGCGFAMAISDSRKLITWGST 72
VF WG GA + + L+ G SAW V GG F++ + + L WG
Sbjct: 368 VFGWGG-NGAGQLGNGTFGAVTAPTVLSAGASAWLGVEPGGA-FSLGLRSNGTLWAWGGN 425
Query: 73 DDLGQSYVTSGKHGEIPEPFPLPTEASIVK---AAAGWAHCVAVTEGGEVYTWG 123
GQ G P P+P A G AH VAV G ++ WG
Sbjct: 426 AS-GQL----GDGTTTPSAIPVPVVGGAGNWRTTATGTAHSVAVRADGTLWAWG 474
Score = 80 (33.2 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 29/113 (25%), Positives = 44/113 (38%)
Query: 14 VFMWGY-LPGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGST 72
++ WG L G L + P L + W + G ++A+ L +WG
Sbjct: 210 LWAWGANLTGQLGTGGTGILPNPTPLKIGTDRDWTAISAGEM-HSVALKADGSLWSWGQN 268
Query: 73 --DDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
+LG G + + P + T + V AAG H VA+ G V WG
Sbjct: 269 LFGELGNGVALPGAN--VTTPTRVGTGSDWVAIAAGALHTVALHRNGTVSAWG 319
Score = 74 (31.1 bits), Expect = 6.1e-10, Sum P(3) = 6.1e-10
Identities = 27/109 (24%), Positives = 41/109 (37%)
Query: 39 PLTVGSAWRDVCGGGCGFAMAISDSRKLITWGST--DDLGQSYVTSGKHGEIPEPFPLPT 96
P+ V W+ V G ++ I L WGS LGQ V P + T
Sbjct: 75 PVQVPGTWKTVAAGTT-HSLGIKADGSLWAWGSNLFGQLGQPLVNGQLATNKFSPIRIGT 133
Query: 97 EASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDK 145
V +AG + G +++WG +FG+L GT + +
Sbjct: 134 GNDWVAVSAGELTSFGLKGDGTLWSWG-------NNLFGELGDGTTVSR 175
Score = 57 (25.1 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 37/142 (26%), Positives = 52/142 (36%)
Query: 9 KMERVVFMWGY-LPGALPQRSPILSPLVVRLPLTVG--SAWRDVCGGGCGFAMAISDSRK 65
K + ++ WG L G L L V P VG S W + G +A+ +
Sbjct: 257 KADGSLWSWGQNLFGELGN-GVALPGANVTTPTRVGTGSDWVAIAAGAL-HTVALHRNGT 314
Query: 66 LITWGSTDDLGQSYVTSGK--HGEIPEPFPLP-TEASIVKAAAGWAHCVAVTEGGEVYTW 122
+ WG+ Q V G + P P T + V AAG +V G V+ W
Sbjct: 315 VSAWGNN---AQGAVGDGTVANRSTPTLIVAPVTLVNNVAIAAGTGVSFSVLANGTVFGW 371
Query: 123 GWKECVPSGR-VFGDLSTGTGL 143
G G FG ++ T L
Sbjct: 372 GGNGAGQLGNGTFGAVTAPTVL 393
Score = 56 (24.8 bits), Expect = 3.7e-07, Sum P(3) = 3.7e-07
Identities = 29/111 (26%), Positives = 42/111 (37%)
Query: 13 VVFMWGYLPGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGST 72
V +WG AL + IL+ L P SA V GG + + L GS
Sbjct: 3 VTTLWGGWFKALLAAAFILATLGA--PAAGWSAVPHVAAGG-NHVLTLRSDGTLWAAGS- 58
Query: 73 DDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
+ GQ +G I P+ + AAG H + + G ++ WG
Sbjct: 59 NQFGQLGDGTG----INRTSPVQVPGTWKTVAAGTTHSLGIKADGSLWAWG 105
Score = 50 (22.7 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 18/52 (34%), Positives = 25/52 (48%)
Query: 98 ASIVKAAAGWAHCVAVTEGGE-VYTW---GWKECVPSGRVFGDLSTGTGLDK 145
A++ AAGW+ V GG V T G S + FG L GTG+++
Sbjct: 22 ATLGAPAAGWSAVPHVAAGGNHVLTLRSDGTLWAAGSNQ-FGQLGDGTGINR 72
Score = 49 (22.3 bits), Expect = 6.1e-10, Sum P(3) = 6.1e-10
Identities = 13/27 (48%), Positives = 14/27 (51%)
Query: 212 PCLVTLNP--GVRIATVAAGGRHTLAL 236
P V +P R VAAGG H LAL
Sbjct: 178 PVQVVADPLSNGRYVAVAAGGEHALAL 204
Score = 41 (19.5 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 10/14 (71%), Positives = 10/14 (71%)
Query: 226 VAAGGRHTLAL-SD 238
VAAGG H L L SD
Sbjct: 37 VAAGGNHVLTLRSD 50
Score = 37 (18.1 bits), Expect = 1.8e-10, Sum P(3) = 1.8e-10
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 226 VAAGGRHTLAL 236
+AAG HT+AL
Sbjct: 299 IAAGALHTVAL 309
Score = 37 (18.1 bits), Expect = 1.1e-09, Sum P(3) = 1.1e-09
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 204 GDENLSAFPCLVTL-NP---GVRIATVAAGGRHTLAL 236
G ++ P +T+ NP G VA GG H+L L
Sbjct: 484 GSTVAASTPQQITVTNPASAGNDWTAVAGGGAHSLGL 520
>TIGR_CMR|GSU_1251 [details] [associations]
symbol:GSU_1251 "BNR repeat domain protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Gene3D:2.60.40.360 InterPro:IPR008962 InterPro:IPR011040
SUPFAM:SSF50939 RefSeq:NP_952304.1 ProteinModelPortal:Q74DR4
GeneID:2688149 KEGG:gsu:GSU1251 PATRIC:22025273
HOGENOM:HOG000144307 OMA:QADGTLW
BioCyc:GSUL243231:GH27-1279-MONOMER Uniprot:Q74DR4
Length = 2082
Score = 158 (60.7 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 49/170 (28%), Positives = 77/170 (45%)
Query: 276 GKDRSAALSRGS-VNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
G ++ L G+ +N P +VPG + K +A G HS I G+L +G L+GQ GQ
Sbjct: 57 GSNQFGQLGDGTGINRTSP-VQVPGTW-KTVAAGTTHSLGIKADGSLWAWGSNLFGQLGQ 114
Query: 335 GSTDDELSPNCVSSL-LGIQIEGVA--AGLWHTICISSDGDVYAXXXXXXXXXXXXXDQA 391
+ +L+ N S + +G + VA AG + + DG +++ +
Sbjct: 115 PLVNGQLATNKFSPIRIGTGNDWVAVSAGELTSFGLKGDGTLWSWGNNLFGELGDGTTVS 174
Query: 392 ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
P + A L N +V+ G H + DG ++ WG N GQLG G
Sbjct: 175 RPQPVQVVADPLSNGRYVAVAAGGEHALALQADGTLWAWGANLTGQLGTG 224
Score = 153 (58.9 bits), Expect = 6.1e-10, Sum P(3) = 6.1e-10
Identities = 46/170 (27%), Positives = 75/170 (44%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE--G 356
G YV +A GG H+ + G L +G L GQ G G T + PN +G +
Sbjct: 189 GRYV-AVAAGGEHALALQADGTLWAWGANLTGQLGTGGTG--ILPNPTPLKIGTDRDWTA 245
Query: 357 VAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRL-LDAPSLENVHSK--SVSC 413
++AG H++ + +DG +++ LP + P+ S +++
Sbjct: 246 ISAGEMHSVALKADGSLWSWGQNLFGELG----NGVALPGANVTTPTRVGTGSDWVAIAA 301
Query: 414 GARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVA 463
GA HT + +G V WG N G +G G V +R+ P+ + + NVA
Sbjct: 302 GALHTVALHRNGTVSAWGNNAQGAVGDGTVANRSTPTLIVAPVTLVNNVA 351
Score = 144 (55.7 bits), Expect = 1.8e-10, Sum P(3) = 1.8e-10
Identities = 47/199 (23%), Positives = 81/199 (40%)
Query: 273 SSYGKDRSAALSRGSV-NSEGPGFRV-PGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
S++G + A+ G+V N P V P V +A + FGWG G
Sbjct: 316 SAWGNNAQGAVGDGTVANRSTPTLIVAPVTLVNNVAIAAGTGVSFSVLANGTVFGWGGNG 375
Query: 331 --QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXX 388
Q G G+ +P +S+ + GV G ++ + S+G ++A
Sbjct: 376 AGQLGNGTFGAVTAPTVLSAGASAWL-GVEPGGAFSLGLRSNGTLWAWGGNASGQLG--- 431
Query: 389 DQAETLPRLLDAPSLENVHS-KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
T P + P + + ++ + G H+ + DG ++ WG N GQLG+G + +
Sbjct: 432 -DGTTTPSAIPVPVVGGAGNWRTTATGTAHSVAVRADGTLWAWGDNSSGQLGIGSTVAAS 490
Query: 448 IPSQVTIEGCVPRNVACGW 466
P Q+T+ P + W
Sbjct: 491 TPQQITVTN--PASAGNDW 507
Score = 137 (53.3 bits), Expect = 1.1e-09, Sum P(3) = 1.1e-09
Identities = 48/184 (26%), Positives = 79/184 (42%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
IA G H + G L +G GQ G G T +P V + G+ +AAG H+
Sbjct: 630 IAAGQDHGLSLQADGTLWAWGANSVGQLGNGVTTATFTPVQVINAEGVPYVSLAAGTSHS 689
Query: 365 ICISSDGDVYAXXXXXXXXXXXX-----XD----QAETLP-RLLDAPSLENVHSKSVS-C 413
+ SDG ++A D Q T+P R+L + + V+
Sbjct: 690 LAGRSDGTLWAWGNNTSGQLGTGPHPGDADPLNPQPHTVPARILTSNPVSAADDWLVATA 749
Query: 414 GARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
G H+A + +G ++ WG N GQLG G + +IP+ + +E + + A + +
Sbjct: 750 GGSHSAALKSNGTLWTWGQNTSGQLGNGTTTEADIPTAL-LEPRISVSPASLAFGPAPIG 808
Query: 474 VPPT 477
+PP+
Sbjct: 809 IPPS 812
Score = 114 (45.2 bits), Expect = 3.2e-07, Sum P(3) = 3.2e-07
Identities = 51/187 (27%), Positives = 76/187 (40%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGS-TDDELSP-NCVSSLLGI---Q 353
GN +A GG HS + G L ++G +GQ G G+ T + +P V+ G
Sbjct: 504 GNDWTAVAGGGAHSLGLKADGTLWSWGDNTFGQLGDGTGTSNRTTPVQIVTGNPGNFDRN 563
Query: 354 IEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXX------XDQAETLPRLLDA--PSLE- 404
VAAG ++ + +DG ++ Q +L A PS
Sbjct: 564 WVAVAAGGVFSLALQADGTIWTWGDNSLLQLGTDPAMLTPATQRNVPAQLAVASPPSTAF 623
Query: 405 NVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVA 463
N +++ G H + DG ++ WG N GQLG G P QV EG ++A
Sbjct: 624 NSSWVAIAAGQDHGLSLQADGTLWAWGANSVGQLGNGVTTATFTPVQVINAEGVPYVSLA 683
Query: 464 CGWWHTL 470
G H+L
Sbjct: 684 AGTSHSL 690
Score = 106 (42.4 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 48/210 (22%), Positives = 78/210 (37%)
Query: 274 SYGKDRSAALSRGSVNSEGPGFRVPGNYVKG-----IACGGRHSAVITDAGALLTFGWGL 328
S+G++ L G V G P G IA G H+ + G + +G
Sbjct: 264 SWGQNLFGELGNG-VALPGANVTTPTRVGTGSDWVAIAAGALHTVALHRNGTVSAWGNNA 322
Query: 329 YGQCGQGSTDDELSPNC-VSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXX 387
G G G+ + +P V+ + + +AAG + + ++G V+
Sbjct: 323 QGAVGDGTVANRSTPTLIVAPVTLVNNVAIAAGTGVSFSVLANGTVFGWGGNGAGQLGNG 382
Query: 388 XDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
A T P +L A + + V G + + +G ++ WG N GQLG G
Sbjct: 383 TFGAVTAPTVLSAGASAWL---GVEPGGAFSLGLRSNGTLWAWGGNASGQLGDGTTTPSA 439
Query: 448 IPSQVTIEGCVPRNVACGWWHTLLLAVPPT 477
IP V R A G H++ + T
Sbjct: 440 IPVPVVGGAGNWRTTATGTAHSVAVRADGT 469
Score = 101 (40.6 bits), Expect = 1.8e-10, Sum P(3) = 1.8e-10
Identities = 41/141 (29%), Positives = 65/141 (46%)
Query: 9 KMERVVFMWGY-LPGALPQRSPILSPLVVRL---PLTVGSAWRDVCGGGCGFAMAISDSR 64
K + ++ WG L G L + + P V++ PL+ G + V GG A+A+
Sbjct: 151 KGDGTLWSWGNNLFGELGDGTTVSRPQPVQVVADPLSNGR-YVAVAAGG-EHALALQADG 208
Query: 65 KLITWGSTDDLGQSYVTSGKHGEIPEPFPLP--TEASIVKAAAGWAHCVAVTEGGEVYTW 122
L WG+ + GQ + +G G +P P PL T+ +AG H VA+ G +++W
Sbjct: 209 TLWAWGA-NLTGQ--LGTGGTGILPNPTPLKIGTDRDWTAISAGEMHSVALKADGSLWSW 265
Query: 123 GWKECVPSGRVFGDLSTGTGL 143
G +FG+L G L
Sbjct: 266 GQN-------LFGELGNGVAL 279
Score = 86 (35.3 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 26/94 (27%), Positives = 41/94 (43%)
Query: 34 LVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHG--EIP 89
+ V P + G+ W V GGG ++ + L +WG LG TS + +I
Sbjct: 495 ITVTNPASAGNDWTAVAGGGA-HSLGLKADGTLWSWGDNTFGQLGDGTGTSNRTTPVQIV 553
Query: 90 EPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
P + + V AAG +A+ G ++TWG
Sbjct: 554 TGNPGNFDRNWVAVAAGGVFSLALQADGTIWTWG 587
Score = 86 (35.3 bits), Expect = 3.4e-08, Sum P(3) = 3.4e-08
Identities = 34/114 (29%), Positives = 44/114 (38%)
Query: 14 VFMWGYLPGALPQRSPILSPLVVRLPLTVG-SAWRDVCGGGCGFAMAISDSRKLITWGST 72
VF WG GA + + L+ G SAW V GG F++ + + L WG
Sbjct: 368 VFGWGG-NGAGQLGNGTFGAVTAPTVLSAGASAWLGVEPGGA-FSLGLRSNGTLWAWGGN 425
Query: 73 DDLGQSYVTSGKHGEIPEPFPLPTEASIVK---AAAGWAHCVAVTEGGEVYTWG 123
GQ G P P+P A G AH VAV G ++ WG
Sbjct: 426 AS-GQL----GDGTTTPSAIPVPVVGGAGNWRTTATGTAHSVAVRADGTLWAWG 474
Score = 80 (33.2 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 29/113 (25%), Positives = 44/113 (38%)
Query: 14 VFMWGY-LPGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGST 72
++ WG L G L + P L + W + G ++A+ L +WG
Sbjct: 210 LWAWGANLTGQLGTGGTGILPNPTPLKIGTDRDWTAISAGEM-HSVALKADGSLWSWGQN 268
Query: 73 --DDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
+LG G + + P + T + V AAG H VA+ G V WG
Sbjct: 269 LFGELGNGVALPGAN--VTTPTRVGTGSDWVAIAAGALHTVALHRNGTVSAWG 319
Score = 74 (31.1 bits), Expect = 6.1e-10, Sum P(3) = 6.1e-10
Identities = 27/109 (24%), Positives = 41/109 (37%)
Query: 39 PLTVGSAWRDVCGGGCGFAMAISDSRKLITWGST--DDLGQSYVTSGKHGEIPEPFPLPT 96
P+ V W+ V G ++ I L WGS LGQ V P + T
Sbjct: 75 PVQVPGTWKTVAAGTT-HSLGIKADGSLWAWGSNLFGQLGQPLVNGQLATNKFSPIRIGT 133
Query: 97 EASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDK 145
V +AG + G +++WG +FG+L GT + +
Sbjct: 134 GNDWVAVSAGELTSFGLKGDGTLWSWG-------NNLFGELGDGTTVSR 175
Score = 57 (25.1 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 37/142 (26%), Positives = 52/142 (36%)
Query: 9 KMERVVFMWGY-LPGALPQRSPILSPLVVRLPLTVG--SAWRDVCGGGCGFAMAISDSRK 65
K + ++ WG L G L L V P VG S W + G +A+ +
Sbjct: 257 KADGSLWSWGQNLFGELGN-GVALPGANVTTPTRVGTGSDWVAIAAGAL-HTVALHRNGT 314
Query: 66 LITWGSTDDLGQSYVTSGK--HGEIPEPFPLP-TEASIVKAAAGWAHCVAVTEGGEVYTW 122
+ WG+ Q V G + P P T + V AAG +V G V+ W
Sbjct: 315 VSAWGNN---AQGAVGDGTVANRSTPTLIVAPVTLVNNVAIAAGTGVSFSVLANGTVFGW 371
Query: 123 GWKECVPSGR-VFGDLSTGTGL 143
G G FG ++ T L
Sbjct: 372 GGNGAGQLGNGTFGAVTAPTVL 393
Score = 56 (24.8 bits), Expect = 3.7e-07, Sum P(3) = 3.7e-07
Identities = 29/111 (26%), Positives = 42/111 (37%)
Query: 13 VVFMWGYLPGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGST 72
V +WG AL + IL+ L P SA V GG + + L GS
Sbjct: 3 VTTLWGGWFKALLAAAFILATLGA--PAAGWSAVPHVAAGG-NHVLTLRSDGTLWAAGS- 58
Query: 73 DDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
+ GQ +G I P+ + AAG H + + G ++ WG
Sbjct: 59 NQFGQLGDGTG----INRTSPVQVPGTWKTVAAGTTHSLGIKADGSLWAWG 105
Score = 50 (22.7 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 18/52 (34%), Positives = 25/52 (48%)
Query: 98 ASIVKAAAGWAHCVAVTEGGE-VYTW---GWKECVPSGRVFGDLSTGTGLDK 145
A++ AAGW+ V GG V T G S + FG L GTG+++
Sbjct: 22 ATLGAPAAGWSAVPHVAAGGNHVLTLRSDGTLWAAGSNQ-FGQLGDGTGINR 72
Score = 49 (22.3 bits), Expect = 6.1e-10, Sum P(3) = 6.1e-10
Identities = 13/27 (48%), Positives = 14/27 (51%)
Query: 212 PCLVTLNP--GVRIATVAAGGRHTLAL 236
P V +P R VAAGG H LAL
Sbjct: 178 PVQVVADPLSNGRYVAVAAGGEHALAL 204
Score = 41 (19.5 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 10/14 (71%), Positives = 10/14 (71%)
Query: 226 VAAGGRHTLAL-SD 238
VAAGG H L L SD
Sbjct: 37 VAAGGNHVLTLRSD 50
Score = 37 (18.1 bits), Expect = 1.8e-10, Sum P(3) = 1.8e-10
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 226 VAAGGRHTLAL 236
+AAG HT+AL
Sbjct: 299 IAAGALHTVAL 309
Score = 37 (18.1 bits), Expect = 1.1e-09, Sum P(3) = 1.1e-09
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 204 GDENLSAFPCLVTL-NP---GVRIATVAAGGRHTLAL 236
G ++ P +T+ NP G VA GG H+L L
Sbjct: 484 GSTVAASTPQQITVTNPASAGNDWTAVAGGGAHSLGL 520
>UNIPROTKB|E1BRZ2 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0072372
"primary cilium" evidence=IEA] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633
PROSITE:PS50012 GeneTree:ENSGT00700000104137 OMA:EREVFAW
EMBL:AADN02025864 IPI:IPI00574044 ProteinModelPortal:E1BRZ2
Ensembl:ENSGALT00000006340 Uniprot:E1BRZ2
Length = 689
Score = 172 (65.6 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 42/152 (27%), Positives = 73/152 (48%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
G +K ++CG +A +TD G ++TFG G G G G+ D P V +LLG ++ VA
Sbjct: 396 GVTIKHVSCGDLFTACLTDRGIIMTFGSGSNGCLGHGNFTDVSQPKIVEALLGYEMVQVA 455
Query: 359 AGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
G H + +S++ +V+A + P+ + P E+ ++ V CG +
Sbjct: 456 CGASHVLAVSNEREVFAWGRGDNGRLGLGTLECHNSPQQVAVPP-EH-EAQRVICGIDSS 513
Query: 419 AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
V+ + ++ G N+ +LGL + PS
Sbjct: 514 MVLTVNNQILACGSNRCNKLGLDRISSAEEPS 545
Score = 146 (56.5 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 47/179 (26%), Positives = 80/179 (44%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCG----QGSTDDELSPNCVSSLL----GIQIEG 356
++ G A +T +G L+ + G G G+T+ +L P VS L G+ I+
Sbjct: 343 VSAGRTQKAGVTKSGRLIMWEAPPMGTAGGPSLPGATE-QLQPQFVSRFLEGQSGVTIKH 401
Query: 357 VAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGAR 416
V+ G T C++ G + + P++++A L V+CGA
Sbjct: 402 VSCGDLFTACLTDRGIIMTFGSGSNGCLGHGNFTDVSQPKIVEA--LLGYEMVQVACGAS 459
Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEG-CVPRNVACGWWHTLLLAV 474
H ++++ +VF WG G+LGLG + N P QV + + V CG +++L V
Sbjct: 460 HVLAVSNEREVFAWGRGDNGRLGLGTLECHNSPQQVAVPPEHEAQRVICGIDSSMVLTV 518
Score = 107 (42.7 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 33/109 (30%), Positives = 48/109 (44%)
Query: 308 GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI 367
G HSA +T +G TFG +GQ G S + P+ V L +++ VA G T+ I
Sbjct: 575 GTAHSAAVTASGQCYTFGSNQHGQLGTNSCRNSRVPHLVVGLRAMKVTVVACGDAFTVAI 634
Query: 368 SSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHS---KSVSC 413
+DG+V D+ +PR + LE H SV+C
Sbjct: 635 GADGEV-CTWGKGARGRLGRKDEETGMPRPVQ---LEETHPYVVTSVAC 679
Score = 98 (39.6 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 38/175 (21%), Positives = 70/175 (40%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
+ACG H +++ + +G G G+ G G+ + SP V+ + + V G+ +
Sbjct: 454 VACGASHVLAVSNEREVFAWGRGDNGRLGLGTLECHNSPQQVAVPPEHEAQRVICGIDSS 513
Query: 365 ICISSDGDVYAXXXX----------XXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSC- 413
+ ++ + + A DQ E A S ++ + V C
Sbjct: 514 MVLTVNNQILACGSNRCNKLGLDRISSAEEPSPEDQVEEATVFTCAQSAP-LNQEPVVCA 572
Query: 414 --GARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACG 465
G H+A + G+ + +G N++GQLG + +P V + VACG
Sbjct: 573 DIGTAHSAAVTASGQCYTFGSNQHGQLGTNSCRNSRVPHLVVGLRAMKVTVVACG 627
Score = 78 (32.5 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 33/108 (30%), Positives = 48/108 (44%)
Query: 20 LPGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCG--FAMAISDSRKLITWGSTDD--L 75
LPGA Q P V R G + + CG F ++D ++T+GS + L
Sbjct: 375 LPGATEQLQP---QFVSRF--LEGQSGVTIKHVSCGDLFTACLTDRGIIMTFGSGSNGCL 429
Query: 76 GQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
G T +I E L E +V+ A G +H +AV+ EV+ WG
Sbjct: 430 GHGNFTDVSQPKIVEAL-LGYE--MVQVACGASHVLAVSNEREVFAWG 474
Score = 68 (29.0 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 38/130 (29%), Positives = 56/130 (43%)
Query: 11 ERVVFMWGYLPGA---LPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLI 67
ER VF WG L SP V +P A R +CG +M ++ + +++
Sbjct: 467 EREVFAWGRGDNGRLGLGTLECHNSPQQVAVP-PEHEAQRVICG--IDSSMVLTVNNQIL 523
Query: 68 TWGST--DDLGQSYVTSGKH----GEIPEP--F------PLPTEASIVKAAAGWAHCVAV 113
GS + LG ++S + ++ E F PL E +V A G AH AV
Sbjct: 524 ACGSNRCNKLGLDRISSAEEPSPEDQVEEATVFTCAQSAPLNQEP-VVCADIGTAHSAAV 582
Query: 114 TEGGEVYTWG 123
T G+ YT+G
Sbjct: 583 TASGQCYTFG 592
Score = 64 (27.6 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 16/75 (21%), Positives = 29/75 (38%)
Query: 53 GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
G +A+S+ R++ WG D+ T H P+ +P E + G +
Sbjct: 457 GASHVLAVSNEREVFAWGRGDNGRLGLGTLECHNS-PQQVAVPPEHEAQRVICGIDSSMV 515
Query: 113 VTEGGEVYTWGWKEC 127
+T ++ G C
Sbjct: 516 LTVNNQILACGSNRC 530
Score = 51 (23.0 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 15/49 (30%), Positives = 20/49 (40%)
Query: 88 IPEPFPLPT-EASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFG 135
I P LP +V+ +AG VT+ G + W E P G G
Sbjct: 327 ITTPLRLPMLNTEVVQVSAGRTQKAGVTKSGRLIMW---EAPPMGTAGG 372
>UNIPROTKB|C9JRH2 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 OrthoDB:EOG4320Z9
IPI:IPI00927389 ProteinModelPortal:C9JRH2 SMR:C9JRH2 STRING:C9JRH2
Ensembl:ENST00000427469 ArrayExpress:C9JRH2 Bgee:C9JRH2
Uniprot:C9JRH2
Length = 230
Score = 162 (62.1 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 51/167 (30%), Positives = 81/167 (48%)
Query: 311 HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
H + T+ G +LT G G GQ G G E + S+ ++ A G+ HT+C+S
Sbjct: 27 HRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDVVQAEAGGM-HTVCLSKS 85
Query: 371 GDVYAXX--XXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVF 428
G VY+ + +E +P ++ E V VS G HTA + DDG+VF
Sbjct: 86 GQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQ--EKV--VQVSAGDSHTAALTDDGRVF 141
Query: 429 CWGW--NKYGQLGLGDVIDRN-IPSQVTIEGCVPRNVACGWWHTLLL 472
WG + G +GL + + ++ +P QV ++ V + VA G H ++L
Sbjct: 142 LWGSFRDNNGVIGLLEPMKKSMVPVQVQLDVPVVK-VASGNDHLVML 187
>UNIPROTKB|Q9UGK8 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0050709 "negative
regulation of protein secretion" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IDA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0007165 GO:GO:0005730
GO:GO:0045111 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0050709 eggNOG:COG5184 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 KO:K15421 OMA:NIWAPKP
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:AJ243950 EMBL:AJ243951
EMBL:BC065375 IPI:IPI00015919 IPI:IPI00383576 RefSeq:NP_036271.1
UniGene:Hs.32470 ProteinModelPortal:Q9UGK8 SMR:Q9UGK8 IntAct:Q9UGK8
STRING:Q9UGK8 PhosphoSite:Q9UGK8 DMDM:38257790 PaxDb:Q9UGK8
PeptideAtlas:Q9UGK8 PRIDE:Q9UGK8 Ensembl:ENST00000265965
Ensembl:ENST00000528200 GeneID:26297 KEGG:hsa:26297 UCSC:uc001mnm.3
UCSC:uc001mnn.3 GeneCards:GC11M017767 HGNC:HGNC:17499 HPA:HPA037811
MIM:606051 neXtProt:NX_Q9UGK8 PharmGKB:PA143485610
InParanoid:Q9UGK8 PhylomeDB:Q9UGK8 GenomeRNAi:26297 NextBio:48643
ArrayExpress:Q9UGK8 Bgee:Q9UGK8 CleanEx:HS_SERGEF
Genevestigator:Q9UGK8 GermOnline:ENSG00000129158 Uniprot:Q9UGK8
Length = 458
Score = 145 (56.1 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 46/135 (34%), Positives = 57/135 (42%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDD--ELSPNCVSSLLGIQIEGVAA 359
V+ I GG HSAV+TD G L G GQ G G T+D +P C SL G I+ VA
Sbjct: 51 VRRITGGGGHSAVVTDGGDLFVCGLNKDGQLGLGHTEDIPYFTP-C-KSLFGCPIQQVAC 108
Query: 360 GLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSC---GAR 416
G TI ++ +G V + PR P +H + V C G R
Sbjct: 109 GWDFTIMLTENGQVLSCGSNSFGQLGVPHG-----PRRCVVPQAIELHKEKVVCIAAGLR 163
Query: 417 HTAVIADDGKVFCWG 431
H G VF WG
Sbjct: 164 HAVAATASGIVFQWG 178
Score = 144 (55.7 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 47/177 (26%), Positives = 78/177 (44%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE-LSPNCVSSLLGIQIEGVAAG 360
++ +ACG + ++T+ G +L+ G +GQ G + P + L ++ +AAG
Sbjct: 103 IQQVACGWDFTIMLTENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIE-LHKEKVVCIAAG 161
Query: 361 LWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDA--PS----LENVHSKSVSCG 414
L H + ++ G V+ +TLP A PS LEN + V G
Sbjct: 162 LRHAVAATASGIVFQWGTGLASCGRRLCP-GQTLPLFFTAKEPSRVTGLENSKAMCVLAG 220
Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVAC---GWWH 468
+ H+A + D G+V+ WG NK+GQL + +P ++ V GW H
Sbjct: 221 SDHSASLTDAGEVYVWGSNKHGQLA-NEAAFLPVPQKIEAHCFQNEKVTAIWSGWTH 276
Score = 120 (47.3 bits), Expect = 0.00031, P = 0.00031
Identities = 28/67 (41%), Positives = 39/67 (58%)
Query: 409 KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV---TIEGCVPRNVACG 465
+ ++ G H+AV+ D G +F G NK GQLGLG D IP ++ GC + VACG
Sbjct: 52 RRITGGGGHSAVVTDGGDLFVCGLNKDGQLGLGHTED--IPYFTPCKSLFGCPIQQVACG 109
Query: 466 WWHTLLL 472
W T++L
Sbjct: 110 WDFTIML 116
Score = 120 (47.3 bits), Expect = 0.00031, P = 0.00031
Identities = 32/124 (25%), Positives = 54/124 (43%)
Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ-IEGVAAGLWHTICISSDGDVYAX 376
A AL +G YGQ G G +D L P ++ + + + G H+ ++ GD++
Sbjct: 14 AAALFAWGANSYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTDGGDLFVC 73
Query: 377 XXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYG 436
E +P SL + V+CG T ++ ++G+V G N +G
Sbjct: 74 GLNKDGQLGLG--HTEDIPYFTPCKSLFGCPIQQVACGWDFTIMLTENGQVLSCGSNSFG 131
Query: 437 QLGL 440
QLG+
Sbjct: 132 QLGV 135
Score = 117 (46.2 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 41/145 (28%), Positives = 63/145 (43%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQ----GST----DDELSPNCVSSLLGIQIEG 356
IA G RH+ T +G + +G GL CG+ G T P+ V+ L +
Sbjct: 158 IAAGLRHAVAATASGIVFQWGTGL-ASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMC 216
Query: 357 VAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLP--RLLDAPSLENVHSKSVSCG 414
V AG H+ ++ G+VY ++A LP + ++A +N ++ G
Sbjct: 217 VLAGSDHSASLTDAGEVYVWGSNKHGQLA---NEAAFLPVPQKIEAHCFQNEKVTAIWSG 273
Query: 415 ARHTAVIADDGKVFCWGWNKYGQLG 439
H + GK+F WG YGQLG
Sbjct: 274 WTHLVAQTETGKMFTWGRADYGQLG 298
Score = 99 (39.9 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 36/97 (37%), Positives = 44/97 (45%)
Query: 71 STDDLGQSYVT-SGKHGEIPE-----PFPLPTEASIV---KAAA---GWAHCVAVTEGGE 118
S D G+ YV S KHG++ P P EA K A GW H VA TE G+
Sbjct: 226 SLTDAGEVYVWGSNKHGQLANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGK 285
Query: 119 VYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFL 155
++TWG + GR L T G E+Q SFL
Sbjct: 286 MFTWGRADYGQLGR---KLETYEGWK---LEKQDSFL 316
Score = 94 (38.1 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 22/69 (31%), Positives = 34/69 (49%)
Query: 411 VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRN---VACGWW 467
VSCG+ H I G + WGWN++G G D + N+ + ++ + + V CG
Sbjct: 338 VSCGSEHNLAIIG-GVCYSWGWNEHGMCG--DGTEANVWAPKPVQALLSSSGLLVGCGAG 394
Query: 468 HTLLLAVPP 476
H+L L P
Sbjct: 395 HSLALCQLP 403
Score = 90 (36.7 bits), Expect = 7.8e-07, Sum P(2) = 7.8e-07
Identities = 18/63 (28%), Positives = 31/63 (49%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
++CG H+ I G ++GW +G CG G+ + +P V +LL V G H+
Sbjct: 338 VSCGSEHNLAII-GGVCYSWGWNEHGMCGDGTEANVWAPKPVQALLSSSGLLVGCGAGHS 396
Query: 365 ICI 367
+ +
Sbjct: 397 LAL 399
Score = 88 (36.0 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 24/73 (32%), Positives = 39/73 (53%)
Query: 54 CG--FAMAISDSRKLITWGSTDDLGQSYVTSG-KHGEIPEPFPLPTEASIVKAAAGWAHC 110
CG F + ++++ ++++ GS + GQ V G + +P+ L E +V AAG H
Sbjct: 108 CGWDFTIMLTENGQVLSCGS-NSFGQLGVPHGPRRCVVPQAIELHKE-KVVCIAAGLRHA 165
Query: 111 VAVTEGGEVYTWG 123
VA T G V+ WG
Sbjct: 166 VAATASGIVFQWG 178
Score = 74 (31.1 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 31/115 (26%), Positives = 48/115 (41%)
Query: 14 VFMWG---YLPGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWG 70
+F WG Y L + +L P + + R + GGG G + ++D L G
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLLPQQLN-DFCKPRSVRRITGGG-GHSAVVTDGGDLFVCG 74
Query: 71 STDDLGQSYVTSGKHGEIPEPFPLPT--EASIVKAAAGWAHCVAVTEGGEVYTWG 123
D GQ + G +IP P + I + A GW + +TE G+V + G
Sbjct: 75 LNKD-GQ--LGLGHTEDIPYFTPCKSLFGCPIQQVACGWDFTIMLTENGQVLSCG 126
Score = 60 (26.2 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 105 AGWAHCVAVTEGGEVYTWG 123
AG H ++T+ GEVY WG
Sbjct: 219 AGSDHSASLTDAGEVYVWG 237
Score = 52 (23.4 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
V I G H T+ G + T+G YGQ G+
Sbjct: 267 VTAIWSGWTHLVAQTETGKMFTWGRADYGQLGR 299
>TAIR|locus:2035423 [details] [associations]
symbol:AT1G19880 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 OMA:FGENKLG
IPI:IPI00543359 RefSeq:NP_173417.2 UniGene:At.16200
ProteinModelPortal:F4HQZ1 SMR:F4HQZ1 PRIDE:F4HQZ1
EnsemblPlants:AT1G19880.1 GeneID:838576 KEGG:ath:AT1G19880
Uniprot:F4HQZ1
Length = 538
Score = 150 (57.9 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 50/167 (29%), Positives = 75/167 (44%)
Query: 319 GALLTFG---WGLYGQCGQGSTDDEL-SPNCVSSLLGIQIEGVAAGL--WHTICISSDGD 372
G LL G W + G+ +G+ + L SP + L+G+ I VA G +H + + +G
Sbjct: 20 GELLFCGATAWDIIGK-RKGAMEGNLVSPTRLRPLVGVNIRFVATGCASFHCVALDVEGR 78
Query: 373 VYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGW 432
Y P ++ S + + G HT V++DDG+ +GW
Sbjct: 79 CYTWGRNEKGQLGHGDMIQRDRPTVVSGLSKHKI--VKAAAGRNHTVVVSDDGQSLGFGW 136
Query: 433 NKYGQLGLGDVIDRNIPSQV--TIEGCVPR----NVACGWWHTLLLA 473
NKYGQLGLG + + +V T CV NVACG T+ L+
Sbjct: 137 NKYGQLGLGSAKNGFVSVEVESTPLPCVVSDEVTNVACGADFTVWLS 183
Score = 133 (51.9 bits), Expect = 3.9e-10, Sum P(3) = 3.9e-10
Identities = 45/181 (24%), Positives = 80/181 (44%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG-- 356
G + +ACG H+ + G + T+G+G YG+ G DE +P + +
Sbjct: 234 GETIVKVACGTNHTVAVDKNGYVYTWGFGGYGRLGHREQKDEWAPRRIDVFQRNNVLPPN 293
Query: 357 --VAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCG 414
++AG ++ C + G +Y D P ++D L + + + G
Sbjct: 294 AILSAGSANSACTAGGGQLYMWGKIKNNGD----DWMYPKP-MMD---LSGWNLRWMDSG 345
Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN--IPSQVT-IEGCVPRNVACGWWHTLL 471
+ H V AD + WG +YG+LG G ++ P +V +EG VACG+ H+++
Sbjct: 346 SMHHFVGADSSCI-SWGHAQYGELGYGPNGQKSSAAPKKVDMLEGMHVMGVACGFCHSMV 404
Query: 472 L 472
+
Sbjct: 405 I 405
Score = 131 (51.2 bits), Expect = 4.5e-10, Sum P(2) = 4.5e-10
Identities = 43/154 (27%), Positives = 67/154 (43%)
Query: 297 VPGNYVKGIACGGRHSAVI--TDAGALLTFGWGLYGQCGQGSTDDELS------------ 342
V + V +ACG + + T+ ++LT G YGQ G G TD+E +
Sbjct: 164 VVSDEVTNVACGADFTVWLSSTEGASILTAGLPQYGQLGHG-TDNEFNMKDSSVRLAYEA 222
Query: 343 ---PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLD 399
P ++SL G I VA G HT+ + +G VY + E PR +D
Sbjct: 223 QPRPKAIASLAGETIVKVACGTNHTVAVDKNGYVYTWGFGGYGRLGHREQKDEWAPRRID 282
Query: 400 APSLENVHSKS--VSCGARHTAVIADDGKVFCWG 431
NV + +S G+ ++A A G+++ WG
Sbjct: 283 VFQRNNVLPPNAILSAGSANSACTAGGGQLYMWG 316
Score = 99 (39.9 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 30/105 (28%), Positives = 47/105 (44%)
Query: 274 SYGKDRSAALSRGSVNSEGPGFRVPG----NYVKGIACGGRHSAVITDAGALLTFGWGLY 329
++G++ L G + V G VK A G H+ V++D G L FGW Y
Sbjct: 81 TWGRNEKGQLGHGDMIQRDRPTVVSGLSKHKIVKA-AAGRNHTVVVSDDGQSLGFGWNKY 139
Query: 330 GQCGQGSTDD-----ELSPNCVSSLLGIQIEGVAAGLWHTICISS 369
GQ G GS + E+ + ++ ++ VA G T+ +SS
Sbjct: 140 GQLGLGSAKNGFVSVEVESTPLPCVVSDEVTNVACGADFTVWLSS 184
Score = 94 (38.1 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 20/63 (31%), Positives = 30/63 (47%)
Query: 392 ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
E PR SL V+CG HT + +G V+ WG+ YG+LG + D P +
Sbjct: 221 EAQPRPKAIASLAGETIVKVACGTNHTVAVDKNGYVYTWGFGGYGRLGHREQKDEWAPRR 280
Query: 452 VTI 454
+ +
Sbjct: 281 IDV 283
Score = 89 (36.4 bits), Expect = 3.9e-10, Sum P(3) = 3.9e-10
Identities = 45/137 (32%), Positives = 63/137 (45%)
Query: 4 EGQEEKMERVVFM----W---GYLPGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGF 56
E EEK ++F W G GA+ ++SP +R PL VG R V G F
Sbjct: 13 ESSEEKGGELLFCGATAWDIIGKRKGAM--EGNLVSPTRLR-PL-VGVNIRFVATGCASF 68
Query: 57 -AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEAS------IVKAAAGWAH 109
+A+ + TWG + GQ G HG++ + PT S IVKAAAG H
Sbjct: 69 HCVALDVEGRCYTWGRNEK-GQL----G-HGDMIQR-DRPTVVSGLSKHKIVKAAAGRNH 121
Query: 110 CVAVTEGGEVYTWGWKE 126
V V++ G+ +GW +
Sbjct: 122 TVVVSDDGQSLGFGWNK 138
Score = 80 (33.2 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 23/83 (27%), Positives = 38/83 (45%)
Query: 293 PGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS--PNCVSSLL 350
P + G ++ + G H V D+ + ++G YG+ G G + S P V L
Sbjct: 330 PMMDLSGWNLRWMDSGSMHHFVGADSSCI-SWGHAQYGELGYGPNGQKSSAAPKKVDMLE 388
Query: 351 GIQIEGVAAGLWHTICISSDGDV 373
G+ + GVA G H++ I D+
Sbjct: 389 GMHVMGVACGFCHSMVIVDRTDI 411
Score = 74 (31.1 bits), Expect = 0.00087, Sum P(3) = 0.00087
Identities = 30/129 (23%), Positives = 51/129 (39%)
Query: 297 VPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG 356
+P N + ++ G +SA G L + WG G DD + P + L G +
Sbjct: 290 LPPNAI--LSAGSANSACTAGGGQL--YMWGKIKNNG----DDWMYPKPMMDLSGWNLRW 341
Query: 357 VAAGLWHTICISSDGDV--YAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCG 414
+ +G H + +D + ++ P+ +D LE +H V+CG
Sbjct: 342 MDSGSMHHF-VGADSSCISWGHAQYGELGYGPNGQKSSAAPKKVDM--LEGMHVMGVACG 398
Query: 415 ARHTAVIAD 423
H+ VI D
Sbjct: 399 FCHSMVIVD 407
Score = 53 (23.7 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 29/108 (26%), Positives = 47/108 (43%)
Query: 53 GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIP---EPFPLPT----EASIVKAAA 105
G + +SD + + +G + GQ + S K+G + E PLP E + V A
Sbjct: 118 GRNHTVVVSDDGQSLGFG-WNKYGQLGLGSAKNGFVSVEVESTPLPCVVSDEVTNVACGA 176
Query: 106 GWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSS 153
+ ++ TEG + T G +P +G L GT D + + SS
Sbjct: 177 DFTVWLSSTEGASILTAG----LPQ---YGQLGHGT--DNEFNMKDSS 215
Score = 42 (19.8 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 222 RIATVAAGGRHTLALSD 238
+I AAG HT+ +SD
Sbjct: 111 KIVKAAAGRNHTVVVSD 127
Score = 37 (18.1 bits), Expect = 3.9e-10, Sum P(3) = 3.9e-10
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 220 GVRIATVAAGGRHTLAL 236
G I VA G HT+A+
Sbjct: 234 GETIVKVACGTNHTVAV 250
>FB|FBgn0045980 [details] [associations]
symbol:niki "nimA-like kinase" species:7227 "Drosophila
melanogaster" [GO:0004702 "receptor signaling protein
serine/threonine kinase activity" evidence=ISS;NAS] [GO:0006468
"protein phosphorylation" evidence=IEA;NAS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE014297
GO:GO:0005524 eggNOG:COG0515 SUPFAM:SSF56112 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004702 HSSP:O14965
PRINTS:PR00633 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104137 RefSeq:NP_651293.1 UniGene:Dm.27397
ProteinModelPortal:Q9VC32 SMR:Q9VC32 PRIDE:Q9VC32
EnsemblMetazoa:FBtr0084737 GeneID:42959 KEGG:dme:Dmel_CG10951
UCSC:CG10951-RA CTD:42959 FlyBase:FBgn0045980 InParanoid:Q9VC32
OMA:WRHYPTK OrthoDB:EOG4FJ6QP PhylomeDB:Q9VC32 GenomeRNAi:42959
NextBio:831528 ArrayExpress:Q9VC32 Bgee:Q9VC32 Uniprot:Q9VC32
Length = 841
Score = 149 (57.5 bits), Expect = 5.5e-10, Sum P(2) = 5.5e-10
Identities = 41/142 (28%), Positives = 68/142 (47%)
Query: 300 NYVKGIACGGR-HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
NY AC G + ++T AG+LL+ G + GQ + SP ++ L +++E VA
Sbjct: 504 NYHVVSACAGDGFTILVTQAGSLLSCGSNAHLALGQDEQRNYHSPKLIARLADVRVEQVA 563
Query: 359 AGLWHTICISSDGDVYAXXXXX-XXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARH 417
AGL H + +S +G VY Q + P+ + ++ SK + CG
Sbjct: 564 AGLQHVLALSREGAVYVWGTSTCGALGLGNYQQQQKFPQKILLSHVKTKPSK-IYCGPDT 622
Query: 418 TAVIADDGKVFCWGWNKYGQLG 439
+AV+ +G++ G N Y +LG
Sbjct: 623 SAVLFANGELHVCGSNDYNKLG 644
Score = 132 (51.5 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 40/184 (21%), Positives = 77/184 (41%)
Query: 286 GSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDD-ELSPN 344
G+ S P P + +A H V+ + G+ +G G +GQ G + + + P+
Sbjct: 438 GTCFSMAPIQLPPKAVIVDVAMSDSHFVVVNEDGSAYAWGEGTHGQLGLTALEAWKHYPS 497
Query: 345 CVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLE 404
+ S+ + AG TI ++ G + + + P+L+ L
Sbjct: 498 RMESVRNYHVVSACAGDGFTILVTQAGSLLSCGSNAHLALGQDEQRNYHSPKLI--ARLA 555
Query: 405 NVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN-IPSQVTIEGCV--PRN 461
+V + V+ G +H ++ +G V+ WG + G LGLG+ + P ++ + P
Sbjct: 556 DVRVEQVAAGLQHVLALSREGAVYVWGTSTCGALGLGNYQQQQKFPQKILLSHVKTKPSK 615
Query: 462 VACG 465
+ CG
Sbjct: 616 IYCG 619
Score = 74 (31.1 bits), Expect = 5.5e-10, Sum P(2) = 5.5e-10
Identities = 15/33 (45%), Positives = 17/33 (51%)
Query: 91 PFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
P LP +A IV A +H V V E G Y WG
Sbjct: 445 PIQLPPKAVIVDVAMSDSHFVVVNEDGSAYAWG 477
>UNIPROTKB|C9JW69 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00787306
ProteinModelPortal:C9JW69 SMR:C9JW69 STRING:C9JW69
Ensembl:ENST00000411533 ArrayExpress:C9JW69 Bgee:C9JW69
Uniprot:C9JW69
Length = 372
Score = 170 (64.9 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 56/182 (30%), Positives = 87/182 (47%)
Query: 296 RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
RVPG +C H + T+ G +LT G G GQ G G E + S+ ++
Sbjct: 33 RVPG----ARSCQVSHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDVVQ 88
Query: 356 GVAAGLWHTICISSDGDVYAXX--XXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSC 413
A G+ HT+C+S G VY+ + +E +P ++ E V VS
Sbjct: 89 AEAGGM-HTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQ--EKV--VQVSA 143
Query: 414 GARHTAVIADDGKVFCWGW--NKYGQLGLGDVIDRN-IPSQVTIEGCVPRNVACGWWHTL 470
G HTA + DDG+VF WG + G +GL + + ++ +P QV ++ V + VA G H +
Sbjct: 144 GDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDVPVVK-VASGNDHLV 202
Query: 471 LL 472
+L
Sbjct: 203 ML 204
Score = 128 (50.1 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 51/180 (28%), Positives = 78/180 (43%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQ---------GSTDDE--LSPNCV-----SS 348
+A G H ++T G L T G G GQ G+ G E L P CV S
Sbjct: 194 VASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGS 253
Query: 349 LLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHS 408
++ + G + T IS +G VY ++ +P+ L S +N
Sbjct: 254 RGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLT--SFKNSTK 311
Query: 409 KSV--SCGARHTAVIADDGKVFCWGWNKYGQLGLGD-VIDRNIPSQVTIEGCVPRNVACG 465
V S G HT + +GK + G +YG+LGLG+ +++IP+ ++ V +VACG
Sbjct: 312 SWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVS-SVACG 370
Score = 102 (41.0 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 52/202 (25%), Positives = 83/202 (41%)
Query: 274 SYGKDRSAALSRGSVNSEGPGFRVPGNY-----VKGIACGGRHSAVITDAGALLTFGWGL 328
S+G + AL R + + EG VPG V ++ G H+A +TD G + F WG
Sbjct: 107 SFGCNDEGALGRDT-SVEGSEM-VPGKVELQEKVVQVSAGDSHTAALTDDGRV--FLWGS 162
Query: 329 Y-GQCGQGSTDDELSPNCV--SSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXX 385
+ G + + + V L + + VA+G H + +++DGD+Y
Sbjct: 163 FRDNNGVIGLLEPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLG 222
Query: 386 XXXDQ------AETLPRLL--------DAPSLENVHSKSVSCGARHTAVIADDGKVFCWG 431
+ + L RLL S +V + CGA T I+ +G V+ +G
Sbjct: 223 RVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFG 282
Query: 432 WNKYGQLGLGDVIDRNIPSQVT 453
+ Y QLG IP +T
Sbjct: 283 LSNYHQLGTPGTESCFIPQNLT 304
Score = 82 (33.9 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 25/91 (27%), Positives = 45/91 (49%)
Query: 33 PLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPF 92
P +V +P V A GG + +S S ++ ++G D+ TS + E+ P
Sbjct: 77 PALVSIPEDVVQAE----AGGM-HTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMV-PG 130
Query: 93 PLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
+ + +V+ +AG +H A+T+ G V+ WG
Sbjct: 131 KVELQEKVVQVSAGDSHTAALTDDGRVFLWG 161
Score = 64 (27.6 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 22/74 (29%), Positives = 39/74 (52%)
Query: 66 LITWGSTDDLGQSYVTSGKHG-EIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGW 124
++T G D+GQ + G++ E +P + +V+A AG H V +++ G+VY++G
Sbjct: 54 VLTLGQ-GDVGQ--LGLGENVMERKKPALVSIPEDVVQAEAGGMHTVCLSKSGQVYSFG- 109
Query: 125 KECVPSGRVFGDLS 138
C G + D S
Sbjct: 110 --CNDEGALGRDTS 121
Score = 44 (20.5 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 222 RIATVAAGGRHTLALSD 238
++ V+AG HT AL+D
Sbjct: 137 KVVQVSAGDSHTAALTD 153
Score = 42 (19.8 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 212 PCLVTLNPGVRIATVAAGGRHTLALS 237
P LV++ V AGG HT+ LS
Sbjct: 77 PALVSIPEDV--VQAEAGGMHTVCLS 100
>MGI|MGI:1351630 [details] [associations]
symbol:Sergef "secretion regulating guanine nucleotide
exchange factor" species:10090 "Mus musculus" [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISA] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0050709 "negative regulation of
protein secretion" evidence=ISO] [GO:0050790 "regulation of
catalytic activity" evidence=ISA] InterPro:IPR027048
MGI:MGI:1351630 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
eggNOG:COG5184 GeneTree:ENSGT00700000104160 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 KO:K15421 OMA:NIWAPKP
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:AJ243952 EMBL:AK145819
EMBL:AK147848 EMBL:BC049603 EMBL:BC119533 EMBL:BC119534
IPI:IPI00134816 RefSeq:NP_038817.1 UniGene:Mm.76659
ProteinModelPortal:Q80YD6 SMR:Q80YD6 STRING:Q80YD6 PRIDE:Q80YD6
Ensembl:ENSMUST00000033127 GeneID:27414 KEGG:mmu:27414
UCSC:uc009gyp.2 InParanoid:Q80YD6 NextBio:305446 Bgee:Q80YD6
Genevestigator:Q80YD6 GermOnline:ENSMUSG00000030839 Uniprot:Q80YD6
Length = 464
Score = 147 (56.8 bits), Expect = 6.7e-10, Sum P(2) = 6.7e-10
Identities = 50/185 (27%), Positives = 82/185 (44%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE-LSPNCVSSLLGIQIEGVAAG 360
++ +ACG + ++T+ G +L+ G +GQ G + + P + L ++ VAAG
Sbjct: 103 IRQVACGWDFTIMLTEKGQVLSCGSNAFGQLGVPHGPRKCVVPQAIECLRE-KVVCVAAG 161
Query: 361 LWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDA--PS----LENVHSKSVSCG 414
L H + ++ G V+ + LP L A PS LEN + G
Sbjct: 162 LRHALATTATGSVFQWGTGLASSGRRLCP-GQNLPLFLTAKEPSRVTGLENSTAVCAVAG 220
Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGW--WHTLLL 472
+ H+A + D G+++ WG NK+GQL V +P ++ V W W T L+
Sbjct: 221 SDHSASLTDTGELYVWGRNKHGQLASRAVF-LPLPQRIEAHYFQDEKVTAVWSGW-THLV 278
Query: 473 AVPPT 477
A T
Sbjct: 279 AKTET 283
Score = 134 (52.2 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 42/133 (31%), Positives = 54/133 (40%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
+K + GG HSAV+TD G L G GQ G G T++ L L G I VA G
Sbjct: 51 IKSVTGGGGHSAVVTDGGDLFVCGLNKDGQLGLGHTEEVLRFTICKPLRGCPIRQVACGW 110
Query: 362 WHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAP-SLENVHSK--SVSCGARHT 418
TI ++ G V + PR P ++E + K V+ G RH
Sbjct: 111 DFTIMLTEKGQVLSCGSNAFGQLGVPHG-----PRKCVVPQAIECLREKVVCVAAGLRHA 165
Query: 419 AVIADDGKVFCWG 431
G VF WG
Sbjct: 166 LATTATGSVFQWG 178
Score = 130 (50.8 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 31/67 (46%), Positives = 40/67 (59%)
Query: 409 KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG---DVIDRNIPSQVTIEGCVPRNVACG 465
KSV+ G H+AV+ D G +F G NK GQLGLG +V+ I + GC R VACG
Sbjct: 52 KSVTGGGGHSAVVTDGGDLFVCGLNKDGQLGLGHTEEVLRFTICKP--LRGCPIRQVACG 109
Query: 466 WWHTLLL 472
W T++L
Sbjct: 110 WDFTIML 116
Score = 121 (47.7 bits), Expect = 0.00025, P = 0.00025
Identities = 41/152 (26%), Positives = 64/152 (42%)
Query: 316 TDAGALLTFGWGL--YGQCGQGSTDDELSPNCVSSLLGIQ-IEGVAAGLWHTICISSDGD 372
T + A + F WG YGQ G G +D P +S I+ V G H+ ++ GD
Sbjct: 10 TVSAAAVLFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVVTDGGD 69
Query: 373 VYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGW 432
++ + E L + P L + V+CG T ++ + G+V G
Sbjct: 70 LFVCGLNKDGQLGLGHTE-EVLRFTICKP-LRGCPIRQVACGWDFTIMLTEKGQVLSCGS 127
Query: 433 NKYGQLGLGDVIDRNIPSQVTIEGCVPRNVAC 464
N +GQLG+ + + Q IE C+ V C
Sbjct: 128 NAFGQLGVPHGPRKCVVPQA-IE-CLREKVVC 157
Score = 100 (40.3 bits), Expect = 7.9e-05, Sum P(3) = 7.9e-05
Identities = 39/144 (27%), Positives = 58/144 (40%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQ----C-GQGS----TDDELSPNCVSSLLGIQIE 355
+A G RH+ T G++ +G GL C GQ T E P+ V+ L
Sbjct: 158 VAAGLRHALATTATGSVFQWGTGLASSGRRLCPGQNLPLFLTAKE--PSRVTGLENSTAV 215
Query: 356 GVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGA 415
AG H+ ++ G++Y LP+ ++A ++ +V G
Sbjct: 216 CAVAGSDHSASLTDTGELYVWGRNKHGQLASRAVFLP-LPQRIEAHYFQDEKVTAVWSGW 274
Query: 416 RHTAVIADDGKVFCWGWNKYGQLG 439
H + GKVF WG YGQLG
Sbjct: 275 THLVAKTETGKVFTWGRADYGQLG 298
Score = 92 (37.4 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 26/74 (35%), Positives = 34/74 (45%)
Query: 71 STDDLGQSYVTS-GKHGEIPE-----PFPLPTEA------SIVKAAAGWAHCVAVTEGGE 118
S D G+ YV KHG++ P P EA + +GW H VA TE G+
Sbjct: 226 SLTDTGELYVWGRNKHGQLASRAVFLPLPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGK 285
Query: 119 VYTWGWKECVPSGR 132
V+TWG + GR
Sbjct: 286 VFTWGRADYGQLGR 299
Score = 91 (37.1 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 24/72 (33%), Positives = 35/72 (48%)
Query: 411 VSCGARHT-AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRN-----VAC 464
+SCG+ H AVI D K WGWN++G G D + N+ + ++ P V C
Sbjct: 338 ISCGSEHNLAVIRD--KCCSWGWNEHGMCG--DGTESNVWTPTPVQALPPSPSRLLLVGC 393
Query: 465 GWWHTLLLAVPP 476
G H+L + P
Sbjct: 394 GAGHSLAVCQLP 405
Score = 81 (33.6 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 23/69 (33%), Positives = 36/69 (52%)
Query: 287 SVNSEGPGFRVPG--NYVKG---IACGGRHS-AVITDAGALLTFGWGLYGQCGQGSTDDE 340
S+ +GP VP + + G I+CG H+ AVI D ++GW +G CG G+ +
Sbjct: 315 SLAFQGPQNSVPSPLHCLTGATEISCGSEHNLAVIRDK--CCSWGWNEHGMCGDGTESNV 372
Query: 341 LSPNCVSSL 349
+P V +L
Sbjct: 373 WTPTPVQAL 381
Score = 78 (32.5 bits), Expect = 4.1e-06, Sum P(3) = 4.1e-06
Identities = 25/82 (30%), Positives = 40/82 (48%)
Query: 54 CG--FAMAISDSRKLITWGSTDDLGQSYVTSG-KHGEIPEPFPLPTEASIVKAAAGWAHC 110
CG F + +++ ++++ GS + GQ V G + +P+ E +V AAG H
Sbjct: 108 CGWDFTIMLTEKGQVLSCGS-NAFGQLGVPHGPRKCVVPQAIECLRE-KVVCVAAGLRHA 165
Query: 111 VAVTEGGEVYTWGWKECVPSGR 132
+A T G V+ WG SGR
Sbjct: 166 LATTATGSVFQWG-TGLASSGR 186
Score = 68 (29.0 bits), Expect = 6.7e-10, Sum P(2) = 6.7e-10
Identities = 30/116 (25%), Positives = 45/116 (38%)
Query: 13 VVFMWG---YLPGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITW 69
V+F WG Y L + + P + G + V GGG G + ++D L
Sbjct: 16 VLFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCI-KSVTGGG-GHSAVVTDGGDLFVC 73
Query: 70 GSTDD--LGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
G D LG + I +P I + A GW + +TE G+V + G
Sbjct: 74 GLNKDGQLGLGHTEEVLRFTICKPL---RGCPIRQVACGWDFTIMLTEKGQVLSCG 126
Score = 61 (26.5 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 98 ASIVKAAAGWAHCVAVTEGGEVYTWG 123
++ V A AG H ++T+ GE+Y WG
Sbjct: 212 STAVCAVAGSDHSASLTDTGELYVWG 237
Score = 52 (23.4 bits), Expect = 4.1e-06, Sum P(3) = 4.1e-06
Identities = 17/65 (26%), Positives = 30/65 (46%)
Query: 275 YGKDRSAALSRGSVNSEGPGFRVPGNY-----VKGIACGGRHSAVITDAGALLTFGWGLY 329
+G+++ L+ +V P R+ +Y V + G H T+ G + T+G Y
Sbjct: 236 WGRNKHGQLASRAVFLPLPQ-RIEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADY 294
Query: 330 GQCGQ 334
GQ G+
Sbjct: 295 GQLGR 299
Score = 39 (18.8 bits), Expect = 1.4e-05, Sum P(4) = 1.4e-05
Identities = 8/14 (57%), Positives = 10/14 (71%)
Query: 222 RIATVAAGGRHTLA 235
++ VAAG RH LA
Sbjct: 154 KVVCVAAGLRHALA 167
>UNIPROTKB|F1S9B1 [details] [associations]
symbol:SERGEF "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050709 "negative regulation of protein secretion"
evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GO:GO:0050709 GeneTree:ENSGT00700000104160 PANTHER:PTHR22870:SF7
EMBL:CU914672 EMBL:CU467662 EMBL:CU693468
Ensembl:ENSSSCT00000014607 OMA:VYQWGTG Uniprot:F1S9B1
Length = 338
Score = 158 (60.7 bits), Expect = 9.8e-09, P = 9.8e-09
Identities = 47/138 (34%), Positives = 62/138 (44%)
Query: 295 FRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQI 354
F PG VK I GG HSA++TD G+L G GQ G G T+D L SLLG I
Sbjct: 45 FCKPG-CVKRITGGGGHSAIVTDQGSLFVCGLNKDGQLGLGHTEDVLYFTLCKSLLGCPI 103
Query: 355 EGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAE-TLPRLLDAPSLENVHSKSVSC 413
+ VA G TI ++ +G V + +P+ ++ E V S++
Sbjct: 104 QQVACGWDFTIILTKNGQVLSCGSNSFGQLGVPHGPRRCVVPQAIEVQR-EKV--VSIAA 160
Query: 414 GARHTAVIADDGKVFCWG 431
G RH G VF WG
Sbjct: 161 GLRHALAATASGLVFQWG 178
Score = 146 (56.5 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 50/186 (26%), Positives = 82/186 (44%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE-LSPNCVSSLLGIQIEGVAAG 360
++ +ACG + ++T G +L+ G +GQ G + P + + ++ +AAG
Sbjct: 103 IQQVACGWDFTIILTKNGQVLSCGSNSFGQLGVPHGPRRCVVPQAIE-VQREKVVSIAAG 161
Query: 361 LWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDA--PS-----LENVHSKSVSC 413
L H + ++ G V+ +TLP L A PS LEN + V
Sbjct: 162 LRHALAATASGLVFQWGTGLASSGRRLCP-GQTLPLFLTAKEPSKVTVGLENSQAVCVLA 220
Query: 414 GARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGW--WHTLL 471
G+ H+A + D G+++ WG NK+GQL +P ++ VA W W T L
Sbjct: 221 GSGHSASLTDAGELYVWGSNKHGQLA-SQAAFLPLPQKIEAHRFQNEKVAAVWSGW-THL 278
Query: 472 LAVPPT 477
+A T
Sbjct: 279 VAQTET 284
Score = 121 (47.7 bits), Expect = 0.00014, P = 0.00014
Identities = 26/65 (40%), Positives = 37/65 (56%)
Query: 409 KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVID-RNIPSQVTIEGCVPRNVACGWW 467
K ++ G H+A++ D G +F G NK GQLGLG D ++ GC + VACGW
Sbjct: 52 KRITGGGGHSAIVTDQGSLFVCGLNKDGQLGLGHTEDVLYFTLCKSLLGCPIQQVACGWD 111
Query: 468 HTLLL 472
T++L
Sbjct: 112 FTIIL 116
Score = 110 (43.8 bits), Expect = 5.8e-06, Sum P(3) = 5.8e-06
Identities = 44/147 (29%), Positives = 59/147 (40%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQ----C-GQGS----TDDELSPNCVSSLLGI 352
V IA G RH+ T +G + +G GL C GQ T E S V L
Sbjct: 155 VVSIAAGLRHALAATASGLVFQWGTGLASSGRRLCPGQTLPLFLTAKEPSKVTVG-LENS 213
Query: 353 QIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVS 412
Q V AG H+ ++ G++Y LP+ ++A +N +V
Sbjct: 214 QAVCVLAGSGHSASLTDAGELYVWGSNKHGQLASQAAFLP-LPQKIEAHRFQNEKVAAVW 272
Query: 413 CGARHTAVIADDGKVFCWGWNKYGQLG 439
G H + GKVF WG YGQLG
Sbjct: 273 SGWTHLVAQTETGKVFTWGRADYGQLG 299
Score = 61 (26.5 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 32/116 (27%), Positives = 47/116 (40%)
Query: 14 VFMWG---YLPGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWG 70
+F WG Y L + +L P + G R + GGG G + ++D L G
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLLPQQLSEFCKPGCVKR-ITGGG-GHSAIVTDQGSLFVCG 74
Query: 71 STDDLGQSYVTSGKHGEIPEPFPLPTE---ASIVKAAAGWAHCVAVTEGGEVYTWG 123
D GQ + G H E F L I + A GW + +T+ G+V + G
Sbjct: 75 LNKD-GQ--LGLG-HTEDVLYFTLCKSLLGCPIQQVACGWDFTIILTKNGQVLSCG 126
Score = 40 (19.1 bits), Expect = 5.8e-06, Sum P(3) = 5.8e-06
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 222 RIATVAAGGRHTLA 235
++ ++AAG RH LA
Sbjct: 154 KVVSIAAGLRHALA 167
>UNIPROTKB|C9JMJ4 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00925317
ProteinModelPortal:C9JMJ4 SMR:C9JMJ4 STRING:C9JMJ4
Ensembl:ENST00000419074 ArrayExpress:C9JMJ4 Bgee:C9JMJ4
Uniprot:C9JMJ4
Length = 272
Score = 162 (62.1 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 51/167 (30%), Positives = 81/167 (48%)
Query: 311 HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
H + T+ G +LT G G GQ G G E + S+ ++ A G+ HT+C+S
Sbjct: 27 HRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDVVQAEAGGM-HTVCLSKS 85
Query: 371 GDVYAXX--XXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVF 428
G VY+ + +E +P ++ E V VS G HTA + DDG+VF
Sbjct: 86 GQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQ--EKV--VQVSAGDSHTAALTDDGRVF 141
Query: 429 CWGW--NKYGQLGLGDVIDRN-IPSQVTIEGCVPRNVACGWWHTLLL 472
WG + G +GL + + ++ +P QV ++ V + VA G H ++L
Sbjct: 142 LWGSFRDNNGVIGLLEPMKKSMVPVQVQLDVPVVK-VASGNDHLVML 187
>ZFIN|ZDB-GENE-061220-11 [details] [associations]
symbol:sergef "secretion regulating guanine
nucleotide exchange factor" species:7955 "Danio rerio" [GO:0050709
"negative regulation of protein secretion" evidence=IEA]
InterPro:IPR027048 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-061220-11 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 HOGENOM:HOG000154414 HOVERGEN:HBG051746
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:BC124691
IPI:IPI00490832 UniGene:Dr.91496 InParanoid:Q08BJ6 Uniprot:Q08BJ6
Length = 423
Score = 144 (55.7 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 45/184 (24%), Positives = 81/184 (44%)
Query: 297 VPG-NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
+PG V+ ++CG + ++T G +L G +GQ G + + + +
Sbjct: 119 LPGFGRVQQVSCGWDFTIILTGDGLVLACGSNAFGQLGVSAEKTHSAEPLLLKSFHEPVT 178
Query: 356 GVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDA------PSLENVHSK 409
VAAGL H + ++ G VY + + +P L + P +V ++
Sbjct: 179 SVAAGLRHALASTASGCVYQWGTGLSSHAKRMLNP-QPVPSHLSSKEPCLVPGFAHVTTQ 237
Query: 410 SVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRN-----VAC 464
V G+ H A + +G++F WG NK+GQL G + +P V ++ + ++ V
Sbjct: 238 KVIAGSAHCACLTVNGELFLWGSNKHGQLISGSLF---LPLPVALDRSMLQDERVSDVHS 294
Query: 465 GWWH 468
GW H
Sbjct: 295 GWTH 298
Score = 141 (54.7 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 68/277 (24%), Positives = 108/277 (38%)
Query: 203 SGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIXXXXXXXXXXXXXXXXXSRIRMV 262
S ++ SA P L+ + + +VAAG RH LA S + +
Sbjct: 158 SAEKTHSAEPLLLK-SFHEPVTSVAAGLRHALA------STASGCVYQWGTGLSSHAKRM 210
Query: 263 SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL 322
+P P+P S+ + L PGF K IA G H A +T G L
Sbjct: 211 LNPQPVP----SHLSSKEPCLV--------PGFAHVTTQ-KVIA-GSAHCACLTVNGELF 256
Query: 323 TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ-IEGVAAGLWHTICISSDGDVYAXXXXXX 381
+G +GQ GS L S+L + + V +G H + + G V+
Sbjct: 257 LWGSNKHGQLISGSLFLPLPVALDRSMLQDERVSDVHSGWTHLVAQTESGRVFTWGRSNY 316
Query: 382 XXXXXXXDQAETLP---RLLDAP-SLENVHSKS-VSCGARHTAVIADDGKVFCWGWNKYG 436
E L+ +P ++ + + +SCG+ H + G+VF WGWN++G
Sbjct: 317 GQLGQTNHSMEKQSCDEHLVRSPVEVKALFGATQISCGSEHNLAVVG-GRVFSWGWNEHG 375
Query: 437 QLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLL 472
G G + D P + + V + CG H++ L
Sbjct: 376 MCGDGSLQDITQPQPIPALADAVALLIGCGAGHSMAL 412
Score = 136 (52.9 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 47/183 (25%), Positives = 77/183 (42%)
Query: 258 RIRMVSSPHPIPCIESSY--GKDRSAALSRGSVNSEGPGFRVPGNY----VKGIACGGRH 311
R+ ++ C+ Y G + L +G+ + RV ++ + GG H
Sbjct: 23 RLNLMEGDQLSKCVSLLYTWGANSYGQLGQGNAEDQAEPRRVESGLQEEQIRAVTGGGGH 82
Query: 312 SAVITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVAAGLWHTICISSD 370
SA+I+D+G LL G GQ G G T + ++ C G +++ V+ G TI ++ D
Sbjct: 83 SALISDSGELLVCGQNHKGQLGLGHTLEIMTFQTCPLPGFG-RVQQVSCGWDFTIILTGD 141
Query: 371 GDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSK--SVSCGARHTAVIADDGKVF 428
G V A ++ + LL L++ H SV+ G RH G V+
Sbjct: 142 GLVLACGSNAFGQLGVSAEKTHSAEPLL----LKSFHEPVTSVAAGLRHALASTASGCVY 197
Query: 429 CWG 431
WG
Sbjct: 198 QWG 200
Score = 97 (39.2 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 18/65 (27%), Positives = 31/65 (47%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
I+CG H+ + G + ++GW +G CG GS D P + +L + G H+
Sbjct: 351 ISCGSEHNLAVV-GGRVFSWGWNEHGMCGDGSLQDITQPQPIPALADAVALLIGCGAGHS 409
Query: 365 ICISS 369
+ + S
Sbjct: 410 MALCS 414
Score = 85 (35.0 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 37/124 (29%), Positives = 56/124 (45%)
Query: 14 VFMWGYLPGALPQR----SPILSPLVVRLPLTV-GSAW---RDVCGGGCGFAMAISDSRK 65
V+ WG + +R P+ S L + P V G A + V G A ++ + +
Sbjct: 196 VYQWGTGLSSHAKRMLNPQPVPSHLSSKEPCLVPGFAHVTTQKVIAGSAHCA-CLTVNGE 254
Query: 66 LITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVK------AAAGWAHCVAVTEGGEV 119
L WGS GQ + SG + P P+ + S+++ +GW H VA TE G V
Sbjct: 255 LFLWGSNKH-GQ--LISGS---LFLPLPVALDRSMLQDERVSDVHSGWTHLVAQTESGRV 308
Query: 120 YTWG 123
+TWG
Sbjct: 309 FTWG 312
Score = 71 (30.1 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 24/74 (32%), Positives = 35/74 (47%)
Query: 54 CG--FAMAISDSRKLITWGSTDDLGQSYVTSGK-HGEIPEPFPLPT-EASIVKAAAGWAH 109
CG F + ++ ++ GS + GQ V++ K H EP L + + AAG H
Sbjct: 130 CGWDFTIILTGDGLVLACGS-NAFGQLGVSAEKTHSA--EPLLLKSFHEPVTSVAAGLRH 186
Query: 110 CVAVTEGGEVYTWG 123
+A T G VY WG
Sbjct: 187 ALASTASGCVYQWG 200
Score = 69 (29.3 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 26/79 (32%), Positives = 36/79 (45%)
Query: 47 RDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIP--EPFPLPTEASIVKAA 104
R V GGG G + ISDS +L+ G GQ + G EI + PLP + + +
Sbjct: 74 RAVTGGG-GHSALISDSGELLVCGQNHK-GQ--LGLGHTLEIMTFQTCPLPGFGRVQQVS 129
Query: 105 AGWAHCVAVTEGGEVYTWG 123
GW + +T G V G
Sbjct: 130 CGWDFTIILTGDGLVLACG 148
Score = 46 (21.3 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 16/61 (26%), Positives = 26/61 (42%)
Query: 66 LITWGSTDDLGQSYVTSGKHGEIPEPFPLPT---EASIVKAAAGWAHCVAVTEGGEVYTW 122
L TWG+ + GQ + G + EP + + E I G H +++ GE+
Sbjct: 39 LYTWGA-NSYGQ--LGQGNAEDQAEPRRVESGLQEEQIRAVTGGGGHSALISDSGELLVC 95
Query: 123 G 123
G
Sbjct: 96 G 96
Score = 37 (18.1 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 222 RIATVAAGGRHTLALSD 238
+I V GG H+ +SD
Sbjct: 72 QIRAVTGGGGHSALISD 88
>UNIPROTKB|C9JQZ4 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00925791
ProteinModelPortal:C9JQZ4 SMR:C9JQZ4 STRING:C9JQZ4
Ensembl:ENST00000430407 ArrayExpress:C9JQZ4 Bgee:C9JQZ4
Uniprot:C9JQZ4
Length = 283
Score = 162 (62.1 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 51/167 (30%), Positives = 81/167 (48%)
Query: 311 HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
H + T+ G +LT G G GQ G G E + S+ ++ A G+ HT+C+S
Sbjct: 27 HRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDVVQAEAGGM-HTVCLSKS 85
Query: 371 GDVYAXX--XXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVF 428
G VY+ + +E +P ++ E V VS G HTA + DDG+VF
Sbjct: 86 GQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQ--EKV--VQVSAGDSHTAALTDDGRVF 141
Query: 429 CWGW--NKYGQLGLGDVIDRN-IPSQVTIEGCVPRNVACGWWHTLLL 472
WG + G +GL + + ++ +P QV ++ V + VA G H ++L
Sbjct: 142 LWGSFRDNNGVIGLLEPMKKSMVPVQVQLDVPVVK-VASGNDHLVML 187
>DICTYBASE|DDB_G0278255 [details] [associations]
symbol:DDB_G0278255 "regulator of chromosome
condensation (RCC1) domain-containing protein" species:44689
"Dictyostelium discoideum" [GO:0044351 "macropinocytosis"
evidence=RCA] dictyBase:DDB_G0278255 INTERPRO:IPR000408
Pfam:PF00415 EMBL:AAFI02000023 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 RefSeq:XP_642243.1
ProteinModelPortal:Q54YF9 PRIDE:Q54YF9 EnsemblProtists:DDB0235387
GeneID:8621452 KEGG:ddi:DDB_G0278255 InParanoid:Q54YF9 OMA:DIACGGY
Uniprot:Q54YF9
Length = 514
Score = 151 (58.2 bits), Expect = 3.1e-09, Sum P(3) = 3.1e-09
Identities = 41/143 (28%), Positives = 70/143 (48%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD--DELSPNCVSSL----LGIQIEGVA 358
IACGG HS +T+ + TFG+G +GQ G G D + P + S G +I+ +
Sbjct: 310 IACGGYHSMFLTNDNEIYTFGYGEFGQLGHGENDTLNHYIPKRIKSTGDNAAGNKIKSIF 369
Query: 359 AGLW-HTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARH 417
AG ++ I++DG VY+ ++ P+ + SL N+ K ++ G +H
Sbjct: 370 AGDHANSFYITTDGSVYSWGWNDGGSLGHGTNENHYSPKKIQ--SLSNI--KKITSGFKH 425
Query: 418 TAVIADDGKVFCWGWNKYGQLGL 440
T + + ++ +G N +GQ L
Sbjct: 426 TLAQSINNDIYVFGDNTFGQTAL 448
Score = 135 (52.6 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 43/186 (23%), Positives = 84/186 (45%)
Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQG--STDDE--LSPNCVSSLL----GIQI 354
K I G H+ ++ + G+L ++G G +G G G S D E +P +++ +I
Sbjct: 248 KKICSGSDHNLLLGNDGSLYSWGNGYFGALGHGVGSNDKENIYTPKKITTFTLNNNESRI 307
Query: 355 EGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQA--ETLPRLLDAPSLENVHS---K 409
+A G +H++ +++D ++Y + +P+ + + +N K
Sbjct: 308 VDIACGGYHSMFLTNDNEIYTFGYGEFGQLGHGENDTLNHYIPKRIKSTG-DNAAGNKIK 366
Query: 410 SVSCGAR-HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWH 468
S+ G ++ I DG V+ WGWN G LG G + P ++ + + + G+ H
Sbjct: 367 SIFAGDHANSFYITTDGSVYSWGWNDGGSLGHGTNENHYSPKKIQSLSNI-KKITSGFKH 425
Query: 469 TLLLAV 474
TL ++
Sbjct: 426 TLAQSI 431
Score = 54 (24.1 bits), Expect = 3.1e-09, Sum P(3) = 3.1e-09
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 99 SIVKAAAGWAHCVAVTEGGEVYTWG 123
+I+ +G+ H + VT+ +Y WG
Sbjct: 177 NIISIVSGYEHSLVVTKDDGIYGWG 201
Score = 42 (19.8 bits), Expect = 3.1e-09, Sum P(3) = 3.1e-09
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 216 TLNPGV-RIATVAAGGRHTLALSD 238
TLN RI +A GG H++ L++
Sbjct: 299 TLNNNESRIVDIACGGYHSMFLTN 322
Score = 39 (18.8 bits), Expect = 9.9e-08, Sum P(3) = 9.9e-08
Identities = 17/60 (28%), Positives = 24/60 (40%)
Query: 68 TWGSTDDLGQSYVTSG-KHGEIPEPFPLPTEASIVKAAAGWA---HCVAVTEGGEVYTWG 123
T + DD Y G + E LP + + +KA +A H + E E Y WG
Sbjct: 38 TTTNEDDNEIVYFDDGTEEFEFISETELPIKLNGLKAKDIFANAYHSGIINENDEFYHWG 97
>UNIPROTKB|F1MM88 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 GeneTree:ENSGT00700000104074 OMA:GCDGTFL
EMBL:DAAA02029619 IPI:IPI00714098 Ensembl:ENSBTAT00000022098
Uniprot:F1MM88
Length = 994
Score = 175 (66.7 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 57/182 (31%), Positives = 79/182 (43%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTF-----GWGLYGQCGQGSTDDELSPNCVSSLLGIQ 353
G + + G H AV+T L T+ G L+GQ G G P V L G
Sbjct: 385 GCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKA 444
Query: 354 IEGVAAGLWHTICISSDGDVYAXXXXXXX-XXXXXXDQAETL-PRLLDAPSLENVHSKSV 411
I V+ G T+C++ +G +YA AE L P LD L N + V
Sbjct: 445 IRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGAEVLEPMQLDF-FLSNP-VEQV 502
Query: 412 SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACGWWHTL 470
SCG H V+ + +V+ WG +YG+LGL D P +V + + + V CG T
Sbjct: 503 SCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTF 562
Query: 471 LL 472
LL
Sbjct: 563 LL 564
Score = 140 (54.3 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 36/147 (24%), Positives = 65/147 (44%)
Query: 296 RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD--DELSPNCVSSLLGIQ 353
++ G ++ ++CG + +TD G L FG YG G + L P + L
Sbjct: 439 KLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGAEVLEPMQLDFFLSNP 498
Query: 354 IEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSC 413
+E V+ G H + ++ + +VY+ ++ P+ +D P + +V C
Sbjct: 499 VEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALII--VAVQC 556
Query: 414 GARHTAVIADDGKVFCWGWNKYGQLGL 440
G T ++ GKV G N++ +LGL
Sbjct: 557 GCDGTFLLTQSGKVLACGLNEFNKLGL 583
Score = 120 (47.3 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 39/154 (25%), Positives = 65/154 (42%)
Query: 300 NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAA 359
N V+ ++CG H V+T + ++G G YG+ G S +D +P V + I V
Sbjct: 497 NPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQC 556
Query: 360 GLWHTICISSDGDVYAXXXXXXX--------XXXXXXDQAETLPRLLD---APSLENVHS 408
G T ++ G V A + +P A L
Sbjct: 557 GCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKI 616
Query: 409 KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGD 442
++++ G HTA + + G++ +G NK GQLG+G+
Sbjct: 617 RTIAPGKTHTAALDERGRLLTFGCNKCGQLGVGN 650
Score = 99 (39.9 bits), Expect = 8.3e-06, Sum P(2) = 8.3e-06
Identities = 26/75 (34%), Positives = 38/75 (50%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG-IQIEGVAAG 360
++ IA G H+A + + G LLTFG GQ G G+ L N + LG Q+ V+ G
Sbjct: 616 IRTIAPGKTHTAALDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCG 675
Query: 361 LWHTICISSDGDVYA 375
TI + D ++A
Sbjct: 676 DEFTIAATDDNHIFA 690
Score = 88 (36.0 bits), Expect = 8.3e-06, Sum P(2) = 8.3e-06
Identities = 31/94 (32%), Positives = 43/94 (45%)
Query: 43 GSAWRDV-CGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEAS-- 99
G A R V CG F + ++D +L +GS D G V E+ EP L S
Sbjct: 442 GKAIRQVSCGDD--FTVCVTDEGQLYAFGS-DYYGCMGVDKVAGAEVLEPMQLDFFLSNP 498
Query: 100 IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRV 133
+ + + G H V +T EVY+WG C GR+
Sbjct: 499 VEQVSCGDNHVVVLTRNKEVYSWG---CGEYGRL 529
Score = 65 (27.9 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 27/101 (26%), Positives = 46/101 (45%)
Query: 43 GSAWRDVCGGGCGFAMAISDSRKLITW----GSTDDLGQSYVTSGKHGEIPEPFPLPT-- 96
G + R VC G FA+ ++ ++L TW G T GQ + G +P +
Sbjct: 385 GCSARQVCAGNTHFAV-VTVEKELYTWVNMQGGTKLHGQ--LGHGDKASYRQPKHVEKLQ 441
Query: 97 EASIVKAAAGWAHCVAVTEGGEVYTWG--WKECVPSGRVFG 135
+I + + G V VT+ G++Y +G + C+ +V G
Sbjct: 442 GKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAG 482
Score = 47 (21.6 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 14/51 (27%), Positives = 20/51 (39%)
Query: 72 TDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTW 122
T + YV G + + + S + AG H VT E+YTW
Sbjct: 360 TSRTSEVYVWGGGKSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTW 410
Score = 40 (19.1 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 10/39 (25%), Positives = 16/39 (41%)
Query: 91 PFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVP 129
P P +++ +A V + EVY WG + P
Sbjct: 342 PTKRPRSSTVTEAPIA----VVTSRTSEVYVWGGGKSTP 376
>UNIPROTKB|F1P3N0 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104312 OMA:MVTLAKS EMBL:AADN02026016
EMBL:AADN02026017 IPI:IPI00579944 Ensembl:ENSGALT00000001779
Uniprot:F1P3N0
Length = 454
Score = 142 (55.0 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 42/173 (24%), Positives = 76/173 (43%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL--SPNCVSSL--LGIQIEGVAAG 360
++CG HS V+TD+ + T G YGQCG+ +DE+ + + L ++ V G
Sbjct: 170 VSCGRAHSLVLTDSEGVFTMGNNSYGQCGRKVVEDEIYSESHLIHQLNDFDSRVVQVVCG 229
Query: 361 LWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
H++ + G V+A ++P L + V+ VS
Sbjct: 230 QDHSLFRTKKGAVFACGWGADGQTGLGHYNITSVPTKLGG-DIAGVNIVQVSSYGDCCLA 288
Query: 421 IADDGKVFCWGWNKYGQLG-LGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
++D+G +F WG ++Y QL + + N+P + + + ACG ++L
Sbjct: 289 VSDEGDLFGWGNSEYLQLASVTETTQVNVPRHLPFKIGKIKEAACGGTGNIVL 341
Score = 141 (54.7 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 56/203 (27%), Positives = 89/203 (43%)
Query: 275 YGKDRSAALSRGSVNSEGP--GFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YG 330
+G D L ++ S G + G + ++ G ++D G L FGWG Y
Sbjct: 247 WGADGQTGLGHYNITSVPTKLGGDIAGVNIVQVSSYGDCCLAVSDEGDL--FGWGNSEYL 304
Query: 331 QCGQGSTDDELS-PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXD 389
Q + +++ P + +G +I+ A G I ++ +G V+ +
Sbjct: 305 QLASVTETTQVNVPRHLPFKIG-KIKEAACGGTGNIVLTEEGAVFVWGYGILGKGPNLTE 363
Query: 390 QA--ETLPRLLDAPS--LENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVID 445
A E +P L S +V V CG H A + + G++F WG N G LG+G + D
Sbjct: 364 TAVPEMIPPSLFGWSDFSSDVRVARVRCGLSHFAALTNRGELFVWGKNLRGCLGIGRMED 423
Query: 446 RNIPSQVTIEGCVPRNVACGWWH 468
+ P +VTI G V +VACG H
Sbjct: 424 QYFPWRVTIPGEVV-DVACGVDH 445
Score = 67 (28.6 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 26/100 (26%), Positives = 42/100 (42%)
Query: 30 ILSPLVVRLPLTVGSAWRDVCGGGCGFA--MAISDSRKLITWGSTD--DLGQSYVTSGKH 85
+L P + LPL R V CG A + ++DS + T G+ G+ V +
Sbjct: 149 VLEPSPIPLPLEKPQKTR-VLQVSCGRAHSLVLTDSEGVFTMGNNSYGQCGRKVVEDEIY 207
Query: 86 GEIPEPFPLPT-EASIVKAAAGWAHCVAVTEGGEVYTWGW 124
E L ++ +V+ G H + T+ G V+ GW
Sbjct: 208 SESHLIHQLNDFDSRVVQVVCGQDHSLFRTKKGAVFACGW 247
Score = 64 (27.6 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 25/85 (29%), Positives = 40/85 (47%)
Query: 53 GCGFAMAISDSRKLI-TWG---STDD-LG-QSYV---TSGKHGEI-PEPFPLPTE----A 98
G GF + S++ + WG + D LG Q + T G + P P PLP E
Sbjct: 106 GYGFTLLSSNTTDITKVWGMGLNKDSQLGFQRSIRDRTKGYEYVLEPSPIPLPLEKPQKT 165
Query: 99 SIVKAAAGWAHCVAVTEGGEVYTWG 123
+++ + G AH + +T+ V+T G
Sbjct: 166 RVLQVSCGRAHSLVLTDSEGVFTMG 190
Score = 39 (18.8 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 19/76 (25%), Positives = 31/76 (40%)
Query: 5 GQEEKMERVVFMWGY-LPGALPQRSPILSPLVVRLPLTV-GSAWR-----DVCGGGCGFA 57
G+ K + VF+WG+ GAL S + + P + + +R + CG+
Sbjct: 49 GKAVKRKDRVFVWGFSYSGALGVPSFVKPDAGWKKPRRIQATPYRLETEEKITSAACGYG 108
Query: 58 MAISDSRKL-IT--WG 70
+ S IT WG
Sbjct: 109 FTLLSSNTTDITKVWG 124
Score = 38 (18.4 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 222 RIATVAAGGRHTLALSD 238
R+ V+ G H+L L+D
Sbjct: 166 RVLQVSCGRAHSLVLTD 182
>DICTYBASE|DDB_G0284187 [details] [associations]
symbol:Dd5P2 "inositol 5-phosphatase" species:44689
"Dictyostelium discoideum" [GO:0046856 "phosphatidylinositol
dephosphorylation" evidence=IDA] [GO:0046855 "inositol phosphate
dephosphorylation" evidence=IDA] [GO:0034485
"phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity"
evidence=IDA] [GO:0004445 "inositol-polyphosphate 5-phosphatase
activity" evidence=IDA] [GO:0004439
"phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity"
evidence=IDA] [GO:0046854 "phosphatidylinositol phosphorylation"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000300 SMART:SM00128 dictyBase:DDB_G0284187
INTERPRO:IPR000408 Pfam:PF00415 GenomeReviews:CM000153_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR005135
SUPFAM:SSF56219 EMBL:AAFI02000064 GO:GO:0046854 GO:GO:0046855
GO:GO:0004439 GO:GO:0046856 GO:GO:0004445 eggNOG:COG5411
GO:GO:0034485 RefSeq:XP_638694.1 ProteinModelPortal:Q54PV1
EnsemblProtists:DDB0191414 GeneID:8624525 KEGG:ddi:DDB_G0284187
InParanoid:Q54PV1 OMA:SHEKMER Uniprot:Q54PV1
Length = 1800
Score = 156 (60.0 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 45/172 (26%), Positives = 76/172 (44%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
V ++CG H+ ++T + + G+ GQ G + D P V +L + + AG
Sbjct: 76 VVSVSCGFNHTLLLTSEYKIFSMGFNQTGQLGIENVVDSAVPLPVDTLSKFNVIKIKAGN 135
Query: 362 WHTICISSDGDVYAXXXXXXXXXXXXXDQAE-------TL--PRLLDA----PSLENVHS 408
+ I+ GD+Y A+ T+ P + DA P +N+
Sbjct: 136 NVSAAITEAGDLYCWGSSAYGQLGNGKMNAKLHSFTPTTILNPLIPDAEKDDPIYQNLQY 195
Query: 409 KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPR 460
++ GA+HT I+ G +F WG N+YGQLGLG + +P + ++ R
Sbjct: 196 TNICFGAQHTIAISTTGAIFSWGSNQYGQLGLGHCNAKLVPVPIHLDNSFER 247
Score = 134 (52.2 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 43/156 (27%), Positives = 71/156 (45%)
Query: 221 VRIATVAAGGRHTLALSDIXXXXX-XXXXXXXXXXXXSRIRMVSSPHPIPCIESSYGKDR 279
++ + G +HT+A+S ++V P PI +++S+ +
Sbjct: 193 LQYTNICFGAQHTIAISTTGAIFSWGSNQYGQLGLGHCNAKLV--PVPIH-LDNSFERRA 249
Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDD 339
S G + + + V IACG HSA++T G L +G YGQ GQG + D
Sbjct: 250 GHINSLGEIVTTDFTAKTIHRIVVDIACGNFHSALLTLEGDLFLWGSNQYGQLGQGDSLD 309
Query: 340 ELSPNCVS-SLLGIQIEGVAAGLWHTICISSDGDVY 374
+ P V SL ++I +A G HTI ++ + DV+
Sbjct: 310 QSVPKTVKGSLEFVKINRMALGNNHTILLTKEQDVF 345
Score = 132 (51.5 bits), Expect = 8.4e-09, Sum P(2) = 8.4e-09
Identities = 26/64 (40%), Positives = 42/64 (65%)
Query: 411 VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWH 468
++CG H+A++ +G +F WG N+YGQLG GD +D+++P V ++E +A G H
Sbjct: 275 IACGNFHSALLTLEGDLFLWGSNQYGQLGQGDSLDQSVPKTVKGSLEFVKINRMALGNNH 334
Query: 469 TLLL 472
T+LL
Sbjct: 335 TILL 338
Score = 97 (39.2 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 24/99 (24%), Positives = 49/99 (49%)
Query: 357 VAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGAR 416
+A G +H+ ++ +GD++ +++P+ + SLE V ++ G
Sbjct: 275 IACGNFHSALLTLEGDLFLWGSNQYGQLGQGDSLDQSVPKTVKG-SLEFVKINRMALGNN 333
Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRN---IPSQV 452
HT ++ + VF +G N++ QLG G + +N P+Q+
Sbjct: 334 HTILLTKEQDVFTFGSNEFYQLGHGSIGGKNRLYFPTQI 372
Score = 88 (36.0 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 22/81 (27%), Positives = 39/81 (48%)
Query: 46 W-RDVCGGGCGF--AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVK 102
W R V CGF + ++ K+ + G + GQ + + +P P ++ +++K
Sbjct: 72 WKRRVVSVSCGFNHTLLLTSEYKIFSMGF-NQTGQLGIENVVDSAVPLPVDTLSKFNVIK 130
Query: 103 AAAGWAHCVAVTEGGEVYTWG 123
AG A+TE G++Y WG
Sbjct: 131 IKAGNNVSAAITEAGDLYCWG 151
Score = 56 (24.8 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 24/103 (23%), Positives = 41/103 (39%)
Query: 36 VRLPLTVGSAWRDV-CGGGCGFAMAISDSRKLITWGST--DDLGQSYVTSGKHGEIPEPF 92
V LP+ S + + G + AI+++ L WGS+ LG + + H P
Sbjct: 116 VPLPVDTLSKFNVIKIKAGNNVSAAITEAGDLYCWGSSAYGQLGNGKMNAKLHSFTPTTI 175
Query: 93 --PLPTEAS----------IVKAAAGWAHCVAVTEGGEVYTWG 123
PL +A G H +A++ G +++WG
Sbjct: 176 LNPLIPDAEKDDPIYQNLQYTNICFGAQHTIAISTTGAIFSWG 218
Score = 46 (21.3 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 15/52 (28%), Positives = 26/52 (50%)
Query: 30 ILSPLVVRL----PLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQ 77
IL+PL+ P+ + ++C G +AIS + + +WGS + GQ
Sbjct: 175 ILNPLIPDAEKDDPIYQNLQYTNICFGA-QHTIAISTTGAIFSWGS-NQYGQ 224
Score = 38 (18.4 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 222 RIATVAAGGRHTLALS 237
R+ +V+ G HTL L+
Sbjct: 75 RVVSVSCGFNHTLLLT 90
>UNIPROTKB|F1NAG9 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GeneTree:ENSGT00700000104074
OMA:GCDGTFL EMBL:AADN02003466 IPI:IPI00598995
Ensembl:ENSGALT00000016792 Uniprot:F1NAG9
Length = 984
Score = 174 (66.3 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 58/182 (31%), Positives = 80/182 (43%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTF-----GWGLYGQCGQGSTDDELSPNCVSSLLGIQ 353
G + + G H AV+T L T+ G L+GQ G G P V L G
Sbjct: 378 GCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDRASYRQPKHVEKLQGKA 437
Query: 354 IEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQ-AETL-PRLLDAPSLENVHSKSV 411
I V+ G T+CI+ +G +YA +E L P LD L N + V
Sbjct: 438 IRQVSCGDDFTVCITDEGQLYAFGSDYYGCIGIDKAYGSEVLEPLQLDF-FLTNP-VEQV 495
Query: 412 SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPR-NVACGWWHTL 470
SCG H AV+ + +V+ WG +YG+LGL D P +V + + +V CG T
Sbjct: 496 SCGDNHVAVLTRNREVYTWGCGEYGRLGLDSEEDHYTPQKVDVPKTLNIVSVHCGCDGTF 555
Query: 471 LL 472
LL
Sbjct: 556 LL 557
Score = 147 (56.8 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 39/147 (26%), Positives = 65/147 (44%)
Query: 296 RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCG--QGSTDDELSPNCVSSLLGIQ 353
++ G ++ ++CG + ITD G L FG YG G + + L P + L
Sbjct: 432 KLQGKAIRQVSCGDDFTVCITDEGQLYAFGSDYYGCIGIDKAYGSEVLEPLQLDFFLTNP 491
Query: 354 IEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSC 413
+E V+ G H ++ + +VY ++ P+ +D P N+ SV C
Sbjct: 492 VEQVSCGDNHVAVLTRNREVYTWGCGEYGRLGLDSEEDHYTPQKVDVPKTLNI--VSVHC 549
Query: 414 GARHTAVIADDGKVFCWGWNKYGQLGL 440
G T ++ GKV G N++ +LGL
Sbjct: 550 GCDGTFLLTQTGKVLACGLNEFNKLGL 576
Score = 139 (54.0 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 46/154 (29%), Positives = 67/154 (43%)
Query: 300 NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAA 359
N V+ ++CG H AV+T + T+G G YG+ G S +D +P V + I V
Sbjct: 490 NPVEQVSCGDNHVAVLTRNREVYTWGCGEYGRLGLDSEEDHYTPQKVDVPKTLNIVSVHC 549
Query: 360 GLWHTICISSDGDVYAXXXXXX--------XXXXXXXDQAETLP---RLLDAPSLENVHS 408
G T ++ G V A D +P L A L
Sbjct: 550 GCDGTFLLTQTGKVLACGLNEFNKLGLNQCTSGIINHDTYCEVPYATSLTLAKQLSFYKI 609
Query: 409 KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGD 442
+++S G HTA I + G++ +G NK GQLG+GD
Sbjct: 610 RTISPGKTHTASIDERGRLLTFGSNKCGQLGVGD 643
Score = 96 (38.9 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 36/130 (27%), Positives = 54/130 (41%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG-IQIEGVAAG 360
++ I+ G H+A I + G LLTFG GQ G G L N ++ LG Q+ V+ G
Sbjct: 609 IRTISPGKTHTASIDERGRLLTFGSNKCGQLGVGDYKKHLGINLLAGPLGGKQVIRVSCG 668
Query: 361 LWHTICISSDGDVYA-------XXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSC 413
TI + D ++A D + PR + SL H +SC
Sbjct: 669 DEFTIAATDDNHIFAWGNGGNGRLAMTPTERAHGSDICTSWPRPIFG-SLH--HVPDLSC 725
Query: 414 GARHTAVIAD 423
HT ++ +
Sbjct: 726 RGWHTIIVVE 735
Score = 86 (35.3 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 30/94 (31%), Positives = 42/94 (44%)
Query: 43 GSAWRDV-CGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEAS-- 99
G A R V CG F + I+D +L +GS D G + E+ EP L +
Sbjct: 435 GKAIRQVSCGDD--FTVCITDEGQLYAFGS-DYYGCIGIDKAYGSEVLEPLQLDFFLTNP 491
Query: 100 IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRV 133
+ + + G H +T EVYTWG C GR+
Sbjct: 492 VEQVSCGDNHVAVLTRNREVYTWG---CGEYGRL 522
Score = 68 (29.0 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 25/101 (24%), Positives = 46/101 (45%)
Query: 43 GSAWRDVCGGGCGFAMAISDSRKLITW----GSTDDLGQSYVTSGKHGEIPEPFPLPT-- 96
G + R VC G FA+ ++ ++L TW G T GQ + G +P +
Sbjct: 378 GCSARQVCAGNTHFAV-VTVEKELYTWVNMQGGTKLHGQ--LGHGDRASYRQPKHVEKLQ 434
Query: 97 EASIVKAAAGWAHCVAVTEGGEVYTWG--WKECVPSGRVFG 135
+I + + G V +T+ G++Y +G + C+ + +G
Sbjct: 435 GKAIRQVSCGDDFTVCITDEGQLYAFGSDYYGCIGIDKAYG 475
Score = 48 (22.0 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 14/51 (27%), Positives = 20/51 (39%)
Query: 72 TDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTW 122
T + YV G + + + S + AG H VT E+YTW
Sbjct: 353 TSRTSEVYVWGGGKSTPQKLDAIKSGCSARQVCAGNTHFAVVTVEKELYTW 403
Score = 39 (18.8 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 7/19 (36%), Positives = 9/19 (47%)
Query: 111 VAVTEGGEVYTWGWKECVP 129
V + EVY WG + P
Sbjct: 351 VVTSRTSEVYVWGGGKSTP 369
>UNIPROTKB|Q7ZZC8 [details] [associations]
symbol:nek9 "Serine/threonine-protein kinase Nek9"
species:8355 "Xenopus laevis" [GO:0019901 "protein kinase binding"
evidence=ISS] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 GO:GO:0005737 GO:GO:0019901
GO:GO:0051301 GO:GO:0007067 GO:GO:0046872 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOVERGEN:HBG039572 EMBL:AY271412 UniGene:Xl.77246
ProteinModelPortal:Q7ZZC8 Xenbase:XB-GENE-974105 Uniprot:Q7ZZC8
Length = 944
Score = 171 (65.3 bits), Expect = 6.9e-09, Sum P(2) = 6.9e-09
Identities = 54/178 (30%), Positives = 77/178 (43%)
Query: 305 IACGGRHSAVITDAGALLTF-----GWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAA 359
+ G H AV+T L T+ G L+GQ G G P V L G ++ V+
Sbjct: 356 VCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQPKHVEKLQGKSVQKVSC 415
Query: 360 GLWHTICISSDGDVYAXXXXXXXXXXXXXDQ-AETL-PRLLDAPSLENVHSKSVSCGARH 417
G T+CI+ +G +Y+ +E L P L+D E V VSCG H
Sbjct: 416 GSDFTVCITDEGQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFFLNEPVDQ--VSCGDSH 473
Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE-GCVPRNVACGWWHTLLLAV 474
+ V+ WG +YG+LGL D P +V ++ G NV CG + LL +
Sbjct: 474 IMALTRSKSVYSWGCGEYGRLGLDSEDDVYSPQKVEVQRGLCIVNVCCGSDGSFLLTL 531
Score = 139 (54.0 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 44/152 (28%), Positives = 67/152 (44%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
V ++CG H +T + ++ ++G G YG+ G S DD SP V G+ I V G
Sbjct: 464 VDQVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSEDDVYSPQKVEVQRGLCIVNVCCGS 523
Query: 362 WHTICISSDGDVYA--------XXXXXXXXXXXXXDQAETLP---RLLDAPSLENVHSKS 410
+ ++ G V A + + +P L A L +S
Sbjct: 524 DGSFLLTLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRS 583
Query: 411 VSCGARHTAVIADDGKVFCWGWNKYGQLGLGD 442
+S G HTA I + G++ +G NK GQLG+GD
Sbjct: 584 ISPGRTHTAAIDERGRLLTFGSNKCGQLGVGD 615
Score = 124 (48.7 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 36/147 (24%), Positives = 65/147 (44%)
Query: 296 RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCG--QGSTDDELSPNCVSSLLGIQ 353
++ G V+ ++CG + ITD G L +FG YG G Q + + L P V L
Sbjct: 404 KLQGKSVQKVSCGSDFTVCITDEGQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFFLNEP 463
Query: 354 IEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSC 413
++ V+ G H + ++ VY+ + P+ ++ + +V C
Sbjct: 464 VDQVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSEDDVYSPQKVEVQ--RGLCIVNVCC 521
Query: 414 GARHTAVIADDGKVFCWGWNKYGQLGL 440
G+ + ++ GKV G N++ +LGL
Sbjct: 522 GSDGSFLLTLTGKVLACGLNEHNKLGL 548
Score = 94 (38.1 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 33/127 (25%), Positives = 53/127 (41%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG-IQIEGVAAG 360
++ I+ G H+A I + G LLTFG GQ G G L N + LG Q+ V+ G
Sbjct: 581 IRSISPGRTHTAAIDERGRLLTFGSNKCGQLGVGDYRKHLGINLLGGPLGGKQVIRVSCG 640
Query: 361 LWHTICISSDGDVYAXXXXXXXXXXXXXD---QAETLPRLLDAPSLENVHSKS-VSCGAR 416
T ++D ++A + Q + P ++H + +SC
Sbjct: 641 DEFTTAATADNHIFAWGNGGNGRLAMTPNERPQGSDICTSWPRPIFGSLHHVTDLSCRGW 700
Query: 417 HTAVIAD 423
HT +I +
Sbjct: 701 HTILIVE 707
Score = 80 (33.2 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 25/84 (29%), Positives = 40/84 (47%)
Query: 54 CG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLP--TEASIVKAAAGWAH 109
CG F + I+D +L ++GS D G V E+ EP + + + + G +H
Sbjct: 415 CGSDFTVCITDEGQLYSFGS-DYYGCLGVNQSAGSEVLEPLLVDFFLNEPVDQVSCGDSH 473
Query: 110 CVAVTEGGEVYTWGWKECVPSGRV 133
+A+T VY+WG C GR+
Sbjct: 474 IMALTRSKSVYSWG---CGEYGRL 494
Score = 49 (22.3 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 102 KAAAGWAHCVAVTEGGEVYTW 122
+ AG AH VT E+YTW
Sbjct: 355 QVCAGDAHFAVVTVEKELYTW 375
Score = 41 (19.5 bits), Expect = 6.9e-09, Sum P(2) = 6.9e-09
Identities = 7/19 (36%), Positives = 9/19 (47%)
Query: 111 VAVTEGGEVYTWGWKECVP 129
V + EVY WG + P
Sbjct: 323 VVTSRSSEVYVWGGGKTTP 341
>UNIPROTKB|E2QYP0 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
Pfam:PF00069 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104074 CTD:91754 OMA:GCDGTFL
EMBL:AAEX03005855 RefSeq:XP_547912.3 Ensembl:ENSCAFT00000026967
GeneID:490790 KEGG:cfa:490790 NextBio:20863745 Uniprot:E2QYP0
Length = 976
Score = 172 (65.6 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
Identities = 54/183 (29%), Positives = 79/183 (43%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTF-----GWGLYGQCGQGSTDDELSPNCVSSLLGIQ 353
G + + G H AV+T L T+ G L+GQ G G P V L G
Sbjct: 368 GCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKA 427
Query: 354 IEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLE---NVHSKS 410
I V+ G T+C++ +G +YA D+ P +L+ L N +
Sbjct: 428 IRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGV--DKVAG-PEVLEPMQLNFFLNNPVEQ 484
Query: 411 VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACGWWHT 469
VSCG H V+ + +V+ WG +YG+LGL D P +V + + + V CG T
Sbjct: 485 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGT 544
Query: 470 LLL 472
LL
Sbjct: 545 FLL 547
Score = 142 (55.0 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 36/147 (24%), Positives = 66/147 (44%)
Query: 296 RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST--DDELSPNCVSSLLGIQ 353
++ G ++ ++CG + +TD G L FG YG G + L P ++ L
Sbjct: 422 KLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFLNNP 481
Query: 354 IEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSC 413
+E V+ G H + ++ + +VY+ ++ P+ +D P + +V C
Sbjct: 482 VEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALII--VAVQC 539
Query: 414 GARHTAVIADDGKVFCWGWNKYGQLGL 440
G T ++ GKV G N++ +LGL
Sbjct: 540 GCDGTFLLTQSGKVLACGLNEFNKLGL 566
Score = 123 (48.4 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 40/154 (25%), Positives = 65/154 (42%)
Query: 300 NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAA 359
N V+ ++CG H V+T + ++G G YG+ G S +D +P V + I V
Sbjct: 480 NPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQC 539
Query: 360 GLWHTICISSDGDVYAXXXXXXX--------XXXXXXDQAETLPRLLD---APSLENVHS 408
G T ++ G V A + +P A L
Sbjct: 540 GCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEIPYTTSFTLAKQLSFYKI 599
Query: 409 KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGD 442
++++ G HTA I + G++ +G NK GQLG+G+
Sbjct: 600 RTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGN 633
Score = 101 (40.6 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 27/75 (36%), Positives = 38/75 (50%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG-IQIEGVAAG 360
++ IA G H+A I + G LLTFG GQ G G+ L N + LG Q+ V+ G
Sbjct: 599 IRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCG 658
Query: 361 LWHTICISSDGDVYA 375
TI + D ++A
Sbjct: 659 DEFTIAATDDNHIFA 673
Score = 83 (34.3 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 30/94 (31%), Positives = 42/94 (44%)
Query: 43 GSAWRDV-CGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLP--TEAS 99
G A R V CG F + ++D +L +GS D G V E+ EP L
Sbjct: 425 GKAIRQVSCGDD--FTVCVTDEGQLYAFGS-DYYGCMGVDKVAGPEVLEPMQLNFFLNNP 481
Query: 100 IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRV 133
+ + + G H V +T EVY+WG C GR+
Sbjct: 482 VEQVSCGDNHVVVLTRNKEVYSWG---CGEYGRL 512
Score = 65 (27.9 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 27/101 (26%), Positives = 46/101 (45%)
Query: 43 GSAWRDVCGGGCGFAMAISDSRKLITW----GSTDDLGQSYVTSGKHGEIPEPFPLPT-- 96
G + R VC G FA+ ++ ++L TW G T GQ + G +P +
Sbjct: 368 GCSARQVCAGNTHFAV-VTVEKELYTWVNMQGGTKLHGQ--LGHGDKASYRQPKHVEKLQ 424
Query: 97 EASIVKAAAGWAHCVAVTEGGEVYTWG--WKECVPSGRVFG 135
+I + + G V VT+ G++Y +G + C+ +V G
Sbjct: 425 GKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAG 465
Score = 47 (21.6 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 14/51 (27%), Positives = 20/51 (39%)
Query: 72 TDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTW 122
T + YV G + + + S + AG H VT E+YTW
Sbjct: 343 TSRTSEVYVWGGGKSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTW 393
Score = 40 (19.1 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
Identities = 10/39 (25%), Positives = 16/39 (41%)
Query: 91 PFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVP 129
P P +++ +A V + EVY WG + P
Sbjct: 325 PTKRPRSSTVTEAPIA----VVTSRTSEVYVWGGGKSTP 359
>RGD|1307187 [details] [associations]
symbol:Nek9 "NIMA-related kinase 9" species:10116 "Rattus
norvegicus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0019901 "protein kinase binding"
evidence=ISO] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 RGD:1307187 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 OMA:GCDGTFL OrthoDB:EOG4NZTSM IPI:IPI00870835
Ensembl:ENSRNOT00000009300 UCSC:RGD:1307187 ArrayExpress:D4A4B2
Uniprot:D4A4B2
Length = 975
Score = 171 (65.3 bits), Expect = 9.4e-09, Sum P(2) = 9.4e-09
Identities = 54/183 (29%), Positives = 79/183 (43%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTF-----GWGLYGQCGQGSTDDELSPNCVSSLLGIQ 353
G + + G H AV+T L T+ G L+GQ G G P V L G
Sbjct: 366 GCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKA 425
Query: 354 IEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHS---KS 410
I V+ G T+C++ +G +YA D+ P +L+ L S +
Sbjct: 426 IHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGV--DKVSG-PEVLEPMQLNFFLSNPVEQ 482
Query: 411 VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACGWWHT 469
VSCG H V+ + +V+ WG +YG+LGL D P +V + + + V CG T
Sbjct: 483 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGT 542
Query: 470 LLL 472
LL
Sbjct: 543 FLL 545
Score = 142 (55.0 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 37/147 (25%), Positives = 67/147 (45%)
Query: 296 RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCG--QGSTDDELSPNCVSSLLGIQ 353
++ G + ++CG + +TD G L FG YG G + S + L P ++ L
Sbjct: 420 KLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNFFLSNP 479
Query: 354 IEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSC 413
+E V+ G H + ++ + +VY+ ++ P+ +D P + +V C
Sbjct: 480 VEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALII--VAVQC 537
Query: 414 GARHTAVIADDGKVFCWGWNKYGQLGL 440
G T ++ GKV G N++ +LGL
Sbjct: 538 GCDGTFLLTQSGKVLACGLNEFNKLGL 564
Score = 122 (48.0 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 40/154 (25%), Positives = 65/154 (42%)
Query: 300 NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAA 359
N V+ ++CG H V+T + ++G G YG+ G S +D +P V + I V
Sbjct: 478 NPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQC 537
Query: 360 GLWHTICISSDGDVYAXXXXXXX--------XXXXXXDQAETLPRLLD---APSLENVHS 408
G T ++ G V A + +P A L
Sbjct: 538 GCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKI 597
Query: 409 KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGD 442
++++ G HTA I + G++ +G NK GQLG+G+
Sbjct: 598 RTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGN 631
Score = 101 (40.6 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 27/75 (36%), Positives = 38/75 (50%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG-IQIEGVAAG 360
++ IA G H+A I + G LLTFG GQ G G+ L N + LG Q+ V+ G
Sbjct: 597 IRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCG 656
Query: 361 LWHTICISSDGDVYA 375
TI + D ++A
Sbjct: 657 DEFTIAATDDNHIFA 671
Score = 81 (33.6 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 27/84 (32%), Positives = 39/84 (46%)
Query: 54 CG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEAS--IVKAAAGWAH 109
CG F + ++D +L +GS D G V E+ EP L S + + + G H
Sbjct: 431 CGDDFTVCVTDEGQLYAFGS-DYYGCMGVDKVSGPEVLEPMQLNFFLSNPVEQVSCGDNH 489
Query: 110 CVAVTEGGEVYTWGWKECVPSGRV 133
V +T EVY+WG C GR+
Sbjct: 490 VVVLTRNKEVYSWG---CGEYGRL 510
Score = 65 (27.9 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 27/101 (26%), Positives = 46/101 (45%)
Query: 43 GSAWRDVCGGGCGFAMAISDSRKLITW----GSTDDLGQSYVTSGKHGEIPEPFPLPT-- 96
G + R VC G FA+ ++ ++L TW G T GQ + G +P +
Sbjct: 366 GCSARQVCAGNTHFAV-VTVEKELYTWVNMQGGTKLHGQ--LGHGDKASYRQPKHVEKLQ 422
Query: 97 EASIVKAAAGWAHCVAVTEGGEVYTWG--WKECVPSGRVFG 135
+I + + G V VT+ G++Y +G + C+ +V G
Sbjct: 423 GKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSG 463
Score = 47 (21.6 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 14/51 (27%), Positives = 20/51 (39%)
Query: 72 TDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTW 122
T + YV G + + + S + AG H VT E+YTW
Sbjct: 341 TSRTSEVYVWGGGKSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTW 391
Score = 40 (19.1 bits), Expect = 9.4e-09, Sum P(2) = 9.4e-09
Identities = 10/39 (25%), Positives = 16/39 (41%)
Query: 91 PFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVP 129
P P +++ +A V + EVY WG + P
Sbjct: 323 PTKRPRSSTVTEAPIA----VVTSRTSEVYVWGGGKSTP 357
Score = 39 (18.8 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 10/29 (34%), Positives = 12/29 (41%)
Query: 271 IESSYGKDRSAALSRGSVNSEGPGFRVPG 299
I S +G + GS S PG R G
Sbjct: 14 INSDFGSESGGGGDSGSGPSASPGPRAGG 42
>MGI|MGI:2387995 [details] [associations]
symbol:Nek9 "NIMA (never in mitosis gene a)-related
expressed kinase 9" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016772 "transferase
activity, transferring phosphorus-containing groups" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 MGI:MGI:2387995
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0019901 GO:GO:0051301 GO:GO:0007067
GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH466590
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104074 CTD:91754 HOVERGEN:HBG039572
OMA:GCDGTFL OrthoDB:EOG4NZTSM EMBL:AJ489828 EMBL:BC024926
EMBL:BC117971 EMBL:BC117972 IPI:IPI00169806 RefSeq:NP_660120.2
UniGene:Mm.29071 ProteinModelPortal:Q8K1R7 SMR:Q8K1R7
DIP:DIP-56880N IntAct:Q8K1R7 STRING:Q8K1R7 PhosphoSite:Q8K1R7
PaxDb:Q8K1R7 PRIDE:Q8K1R7 Ensembl:ENSMUST00000040992 GeneID:217718
KEGG:mmu:217718 InParanoid:Q148U2 NextBio:375996 Bgee:Q8K1R7
Genevestigator:Q8K1R7 GermOnline:ENSMUSG00000034290 Uniprot:Q8K1R7
Length = 984
Score = 171 (65.3 bits), Expect = 9.7e-09, Sum P(2) = 9.7e-09
Identities = 54/183 (29%), Positives = 79/183 (43%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTF-----GWGLYGQCGQGSTDDELSPNCVSSLLGIQ 353
G + + G H AV+T L T+ G L+GQ G G P V L G
Sbjct: 368 GCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKA 427
Query: 354 IEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHS---KS 410
I V+ G T+C++ +G +YA D+ P +L+ L S +
Sbjct: 428 IHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGV--DKVSG-PEVLEPMQLNFFLSNPVEQ 484
Query: 411 VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACGWWHT 469
VSCG H V+ + +V+ WG +YG+LGL D P +V + + + V CG T
Sbjct: 485 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGT 544
Query: 470 LLL 472
LL
Sbjct: 545 FLL 547
Score = 142 (55.0 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 37/147 (25%), Positives = 67/147 (45%)
Query: 296 RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCG--QGSTDDELSPNCVSSLLGIQ 353
++ G + ++CG + +TD G L FG YG G + S + L P ++ L
Sbjct: 422 KLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNFFLSNP 481
Query: 354 IEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSC 413
+E V+ G H + ++ + +VY+ ++ P+ +D P + +V C
Sbjct: 482 VEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALII--VAVQC 539
Query: 414 GARHTAVIADDGKVFCWGWNKYGQLGL 440
G T ++ GKV G N++ +LGL
Sbjct: 540 GCDGTFLLTQSGKVLACGLNEFNKLGL 566
Score = 122 (48.0 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 40/154 (25%), Positives = 65/154 (42%)
Query: 300 NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAA 359
N V+ ++CG H V+T + ++G G YG+ G S +D +P V + I V
Sbjct: 480 NPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQC 539
Query: 360 GLWHTICISSDGDVYAXXXXXXX--------XXXXXXDQAETLPRLLD---APSLENVHS 408
G T ++ G V A + +P A L
Sbjct: 540 GCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKI 599
Query: 409 KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGD 442
++++ G HTA I + G++ +G NK GQLG+G+
Sbjct: 600 RTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGN 633
Score = 101 (40.6 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 27/75 (36%), Positives = 38/75 (50%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG-IQIEGVAAG 360
++ IA G H+A I + G LLTFG GQ G G+ L N + LG Q+ V+ G
Sbjct: 599 IRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCG 658
Query: 361 LWHTICISSDGDVYA 375
TI + D ++A
Sbjct: 659 DEFTIAATDDNHIFA 673
Score = 81 (33.6 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 27/84 (32%), Positives = 39/84 (46%)
Query: 54 CG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEAS--IVKAAAGWAH 109
CG F + ++D +L +GS D G V E+ EP L S + + + G H
Sbjct: 433 CGDDFTVCVTDEGQLYAFGS-DYYGCMGVDKVSGPEVLEPMQLNFFLSNPVEQVSCGDNH 491
Query: 110 CVAVTEGGEVYTWGWKECVPSGRV 133
V +T EVY+WG C GR+
Sbjct: 492 VVVLTRNKEVYSWG---CGEYGRL 512
Score = 65 (27.9 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 27/101 (26%), Positives = 46/101 (45%)
Query: 43 GSAWRDVCGGGCGFAMAISDSRKLITW----GSTDDLGQSYVTSGKHGEIPEPFPLPT-- 96
G + R VC G FA+ ++ ++L TW G T GQ + G +P +
Sbjct: 368 GCSARQVCAGNTHFAV-VTVEKELYTWVNMQGGTKLHGQ--LGHGDKASYRQPKHVEKLQ 424
Query: 97 EASIVKAAAGWAHCVAVTEGGEVYTWG--WKECVPSGRVFG 135
+I + + G V VT+ G++Y +G + C+ +V G
Sbjct: 425 GKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSG 465
Score = 47 (21.6 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 14/51 (27%), Positives = 20/51 (39%)
Query: 72 TDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTW 122
T + YV G + + + S + AG H VT E+YTW
Sbjct: 343 TSRTSEVYVWGGGKSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTW 393
Score = 40 (19.1 bits), Expect = 9.7e-09, Sum P(2) = 9.7e-09
Identities = 10/39 (25%), Positives = 16/39 (41%)
Query: 91 PFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVP 129
P P +++ +A V + EVY WG + P
Sbjct: 325 PTKRPRSSTVTEAPIA----VVTSRTSEVYVWGGGKSTP 359
>UNIPROTKB|F1S2Q4 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 GeneTree:ENSGT00700000104074 OMA:GCDGTFL
EMBL:CT737372 Ensembl:ENSSSCT00000002648 Uniprot:F1S2Q4
Length = 1004
Score = 172 (65.6 bits), Expect = 9.9e-09, Sum P(2) = 9.9e-09
Identities = 54/183 (29%), Positives = 79/183 (43%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTF-----GWGLYGQCGQGSTDDELSPNCVSSLLGIQ 353
G + + G H AV+T L T+ G L+GQ G G P V L G
Sbjct: 387 GCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKA 446
Query: 354 IEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLE---NVHSKS 410
I V+ G T+C++ +G +YA D+ P +L+ L N +
Sbjct: 447 IRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGV--DKVAG-PEVLEPMQLNFFSNNPVEQ 503
Query: 411 VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACGWWHT 469
VSCG H V+ + +V+ WG +YG+LGL D P +V + + + V CG T
Sbjct: 504 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGT 563
Query: 470 LLL 472
LL
Sbjct: 564 FLL 566
Score = 136 (52.9 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 35/147 (23%), Positives = 65/147 (44%)
Query: 296 RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST--DDELSPNCVSSLLGIQ 353
++ G ++ ++CG + +TD G L FG YG G + L P ++
Sbjct: 441 KLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFSNNP 500
Query: 354 IEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSC 413
+E V+ G H + ++ + +VY+ ++ P+ +D P + +V C
Sbjct: 501 VEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALII--VAVQC 558
Query: 414 GARHTAVIADDGKVFCWGWNKYGQLGL 440
G T ++ GKV G N++ +LGL
Sbjct: 559 GCDGTFLLTQSGKVLACGLNEFNKLGL 585
Score = 123 (48.4 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 41/154 (26%), Positives = 65/154 (42%)
Query: 300 NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAA 359
N V+ ++CG H V+T + ++G G YG+ G S +D +P V + I V
Sbjct: 499 NPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQC 558
Query: 360 GLWHTICISSDGDVYAXXXXXXX--------XXXXXXDQAETLPRLLD---APSLENVHS 408
G T ++ G V A + +P A L
Sbjct: 559 GCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKI 618
Query: 409 KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGD 442
++V+ G HTA I + G++ +G NK GQLG+G+
Sbjct: 619 RTVAPGKTHTAAIDERGRLLTFGCNKCGQLGVGN 652
Score = 100 (40.3 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 26/75 (34%), Positives = 38/75 (50%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG-IQIEGVAAG 360
++ +A G H+A I + G LLTFG GQ G G+ L N + LG Q+ V+ G
Sbjct: 618 IRTVAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCG 677
Query: 361 LWHTICISSDGDVYA 375
TI + D ++A
Sbjct: 678 DEFTIAATDDNHIFA 692
Score = 85 (35.0 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 30/94 (31%), Positives = 43/94 (45%)
Query: 43 GSAWRDV-CGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLP--TEAS 99
G A R V CG F + ++D +L +GS D G V E+ EP L +
Sbjct: 444 GKAIRQVSCGDD--FTVCVTDEGQLYAFGS-DYYGCMGVDKVAGPEVLEPMQLNFFSNNP 500
Query: 100 IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRV 133
+ + + G H V +T EVY+WG C GR+
Sbjct: 501 VEQVSCGDNHVVVLTRNKEVYSWG---CGEYGRL 531
Score = 65 (27.9 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 27/101 (26%), Positives = 46/101 (45%)
Query: 43 GSAWRDVCGGGCGFAMAISDSRKLITW----GSTDDLGQSYVTSGKHGEIPEPFPLPT-- 96
G + R VC G FA+ ++ ++L TW G T GQ + G +P +
Sbjct: 387 GCSARQVCAGNTHFAV-VTVEKELYTWVNMQGGTKLHGQ--LGHGDKASYRQPKHVEKLQ 443
Query: 97 EASIVKAAAGWAHCVAVTEGGEVYTWG--WKECVPSGRVFG 135
+I + + G V VT+ G++Y +G + C+ +V G
Sbjct: 444 GKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAG 484
Score = 47 (21.6 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 14/51 (27%), Positives = 20/51 (39%)
Query: 72 TDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTW 122
T + YV G + + + S + AG H VT E+YTW
Sbjct: 362 TSRTSEVYVWGGGKSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTW 412
Score = 39 (18.8 bits), Expect = 9.9e-09, Sum P(2) = 9.9e-09
Identities = 7/19 (36%), Positives = 9/19 (47%)
Query: 111 VAVTEGGEVYTWGWKECVP 129
V + EVY WG + P
Sbjct: 360 VVTSRTSEVYVWGGGKSTP 378
>UNIPROTKB|Q8TD19 [details] [associations]
symbol:NEK9 "Serine/threonine-protein kinase Nek9"
species:9606 "Homo sapiens" [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005739 "mitochondrion" evidence=IDA]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
EMBL:AC007055 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
KO:K08857 CleanEx:HS_NEK8 EMBL:AY048580 EMBL:AY080896 EMBL:AB082526
EMBL:BC009336 EMBL:BC093881 EMBL:BC112101 IPI:IPI00301609
RefSeq:NP_149107.4 UniGene:Hs.7200 ProteinModelPortal:Q8TD19
SMR:Q8TD19 IntAct:Q8TD19 MINT:MINT-2984282 STRING:Q8TD19
PhosphoSite:Q8TD19 DMDM:116242675 PaxDb:Q8TD19 PeptideAtlas:Q8TD19
PRIDE:Q8TD19 DNASU:91754 Ensembl:ENST00000238616 GeneID:91754
KEGG:hsa:91754 UCSC:uc001xrl.3 CTD:91754 GeneCards:GC14M075548
HGNC:HGNC:18591 HPA:HPA001405 MIM:609798 neXtProt:NX_Q8TD19
PharmGKB:PA38593 HOVERGEN:HBG039572 InParanoid:Q8TD19 OMA:GCDGTFL
OrthoDB:EOG4NZTSM PhylomeDB:Q8TD19 BindingDB:Q8TD19
ChEMBL:CHEMBL5257 GenomeRNAi:91754 NextBio:77443
ArrayExpress:Q8TD19 Bgee:Q8TD19 CleanEx:HS_NEK9
Genevestigator:Q8TD19 GermOnline:ENSG00000119638 Uniprot:Q8TD19
Length = 979
Score = 170 (64.9 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 54/183 (29%), Positives = 79/183 (43%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTF-----GWGLYGQCGQGSTDDELSPNCVSSLLGIQ 353
G + + G H AV+T L T+ G L+GQ G G P V L G
Sbjct: 368 GCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKA 427
Query: 354 IEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHS---KS 410
I V+ G T+C++ +G +YA D+ P +L+ L S +
Sbjct: 428 IRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGV--DKVAG-PEVLEPMQLNFFLSNPVEQ 484
Query: 411 VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACGWWHT 469
VSCG H V+ + +V+ WG +YG+LGL D P +V + + + V CG T
Sbjct: 485 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGT 544
Query: 470 LLL 472
LL
Sbjct: 545 FLL 547
Score = 142 (55.0 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 36/147 (24%), Positives = 66/147 (44%)
Query: 296 RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST--DDELSPNCVSSLLGIQ 353
++ G ++ ++CG + +TD G L FG YG G + L P ++ L
Sbjct: 422 KLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFLSNP 481
Query: 354 IEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSC 413
+E V+ G H + ++ + +VY+ ++ P+ +D P + +V C
Sbjct: 482 VEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALII--VAVQC 539
Query: 414 GARHTAVIADDGKVFCWGWNKYGQLGL 440
G T ++ GKV G N++ +LGL
Sbjct: 540 GCDGTFLLTQSGKVLACGLNEFNKLGL 566
Score = 122 (48.0 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 40/154 (25%), Positives = 65/154 (42%)
Query: 300 NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAA 359
N V+ ++CG H V+T + ++G G YG+ G S +D +P V + I V
Sbjct: 480 NPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQC 539
Query: 360 GLWHTICISSDGDVYAXXXXXXX--------XXXXXXDQAETLPRLLD---APSLENVHS 408
G T ++ G V A + +P A L
Sbjct: 540 GCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKI 599
Query: 409 KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGD 442
++++ G HTA I + G++ +G NK GQLG+G+
Sbjct: 600 RTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGN 633
Score = 101 (40.6 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 27/75 (36%), Positives = 38/75 (50%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG-IQIEGVAAG 360
++ IA G H+A I + G LLTFG GQ G G+ L N + LG Q+ V+ G
Sbjct: 599 IRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCG 658
Query: 361 LWHTICISSDGDVYA 375
TI + D ++A
Sbjct: 659 DEFTIAATDDNHIFA 673
Score = 85 (35.0 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 31/94 (32%), Positives = 43/94 (45%)
Query: 43 GSAWRDV-CGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEAS-- 99
G A R V CG F + ++D +L +GS D G V E+ EP L S
Sbjct: 425 GKAIRQVSCGDD--FTVCVTDEGQLYAFGS-DYYGCMGVDKVAGPEVLEPMQLNFFLSNP 481
Query: 100 IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRV 133
+ + + G H V +T EVY+WG C GR+
Sbjct: 482 VEQVSCGDNHVVVLTRNKEVYSWG---CGEYGRL 512
Score = 65 (27.9 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 27/101 (26%), Positives = 46/101 (45%)
Query: 43 GSAWRDVCGGGCGFAMAISDSRKLITW----GSTDDLGQSYVTSGKHGEIPEPFPLPT-- 96
G + R VC G FA+ ++ ++L TW G T GQ + G +P +
Sbjct: 368 GCSARQVCAGNTHFAV-VTVEKELYTWVNMQGGTKLHGQ--LGHGDKASYRQPKHVEKLQ 424
Query: 97 EASIVKAAAGWAHCVAVTEGGEVYTWG--WKECVPSGRVFG 135
+I + + G V VT+ G++Y +G + C+ +V G
Sbjct: 425 GKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAG 465
Score = 47 (21.6 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 14/51 (27%), Positives = 20/51 (39%)
Query: 72 TDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTW 122
T + YV G + + + S + AG H VT E+YTW
Sbjct: 343 TSRTSEVYVWGGGKSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTW 393
Score = 40 (19.1 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 10/39 (25%), Positives = 16/39 (41%)
Query: 91 PFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVP 129
P P +++ +A V + EVY WG + P
Sbjct: 325 PTKRPRSSTVTEAPIA----VVTSRTSEVYVWGGGKSTP 359
>GENEDB_PFALCIPARUM|MAL7P1.38 [details] [associations]
symbol:MAL7P1.38 "regulator of chromosome
condensation protein, putative" species:5833 "Plasmodium
falciparum" [GO:0005634 "nucleus" evidence=ISS] [GO:0003682
"chromatin binding" evidence=ISS] [GO:0030261 "chromosome
condensation" evidence=ISS] [GO:0007049 "cell cycle" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0003682
GO:GO:0007049 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0030261 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS50012
EMBL:AL844506 RefSeq:XP_002808773.1 ProteinModelPortal:C0H4M6
EnsemblProtists:MAL7P1.38:mRNA GeneID:2655211 KEGG:pfa:MAL7P1.38
EuPathDB:PlasmoDB:PF3D7_0711500 HOGENOM:HOG000283921
ProtClustDB:CLSZ2431811 Uniprot:C0H4M6
Length = 687
Score = 152 (58.6 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 44/158 (27%), Positives = 73/158 (46%)
Query: 300 NYVKGIACGGRHSAVITDAGALLTFGWG--LYGQCGQGSTDDELSP-NCVSSLLGIQIEG 356
N + I CGG ++ V + +L +G G YG CG S D+ + + L +I
Sbjct: 262 NKFENIYCGGNNTYVQLE-NSLDVYGIGRNAYGSCGVSSKDNIIKKFEKIQELSQKKINQ 320
Query: 357 VAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGAR 416
+ G T+C+ ++ D+Y D L LD N K+++CG
Sbjct: 321 LCGGQSFTVCLLNNNDLYIWGNREILGMEYDDDAYSPLE--LDFFKKNNYTVKNITCGTD 378
Query: 417 HTAVIADDGKVFCWGW--NKYGQLGLGDVIDRNIPSQV 452
H V+ D+GK+F WG N++ + VI++N PS++
Sbjct: 379 HCLVLTDNGKLFGWGTGGNEFDENTSLAVIEKNEPSEI 416
Score = 55 (24.4 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 24/85 (28%), Positives = 37/85 (43%)
Query: 49 VCGGGCGFAMAISDSRKLITWGSTDD--LGQSYVTSG----KHGEIPEPFPLPTEASIVK 102
+CG D KL ++G D LG+ +SG +H F P++ I K
Sbjct: 45 ICGSMHTIIKTTDD--KLYSFGCNDMGVLGRKTYSSGIKDLEHSPTLINFTFPSK--IKK 100
Query: 103 AAAGWAHCVAVTEGGEVY-TWGWKE 126
G H + E G+VY T G+++
Sbjct: 101 ITCGDNHTAILLENGKVYITGGFRD 125
Score = 45 (20.9 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 202 SSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLAL 236
SSG ++L P L+ +I + G HT L
Sbjct: 77 SSGIKDLEHSPTLINFTFPSKIKKITCGDNHTAIL 111
>UNIPROTKB|C0H4M6 [details] [associations]
symbol:MAL7P1.38 "Regulator of chromosome condensation,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0003682
"chromatin binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0007049 "cell cycle" evidence=ISS] [GO:0030261
"chromosome condensation" evidence=ISS] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0003682 GO:GO:0007049
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0030261
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS50012 EMBL:AL844506
RefSeq:XP_002808773.1 ProteinModelPortal:C0H4M6
EnsemblProtists:MAL7P1.38:mRNA GeneID:2655211 KEGG:pfa:MAL7P1.38
EuPathDB:PlasmoDB:PF3D7_0711500 HOGENOM:HOG000283921
ProtClustDB:CLSZ2431811 Uniprot:C0H4M6
Length = 687
Score = 152 (58.6 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 44/158 (27%), Positives = 73/158 (46%)
Query: 300 NYVKGIACGGRHSAVITDAGALLTFGWG--LYGQCGQGSTDDELSP-NCVSSLLGIQIEG 356
N + I CGG ++ V + +L +G G YG CG S D+ + + L +I
Sbjct: 262 NKFENIYCGGNNTYVQLE-NSLDVYGIGRNAYGSCGVSSKDNIIKKFEKIQELSQKKINQ 320
Query: 357 VAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGAR 416
+ G T+C+ ++ D+Y D L LD N K+++CG
Sbjct: 321 LCGGQSFTVCLLNNNDLYIWGNREILGMEYDDDAYSPLE--LDFFKKNNYTVKNITCGTD 378
Query: 417 HTAVIADDGKVFCWGW--NKYGQLGLGDVIDRNIPSQV 452
H V+ D+GK+F WG N++ + VI++N PS++
Sbjct: 379 HCLVLTDNGKLFGWGTGGNEFDENTSLAVIEKNEPSEI 416
Score = 55 (24.4 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 24/85 (28%), Positives = 37/85 (43%)
Query: 49 VCGGGCGFAMAISDSRKLITWGSTDD--LGQSYVTSG----KHGEIPEPFPLPTEASIVK 102
+CG D KL ++G D LG+ +SG +H F P++ I K
Sbjct: 45 ICGSMHTIIKTTDD--KLYSFGCNDMGVLGRKTYSSGIKDLEHSPTLINFTFPSK--IKK 100
Query: 103 AAAGWAHCVAVTEGGEVY-TWGWKE 126
G H + E G+VY T G+++
Sbjct: 101 ITCGDNHTAILLENGKVYITGGFRD 125
Score = 45 (20.9 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 202 SSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLAL 236
SSG ++L P L+ +I + G HT L
Sbjct: 77 SSGIKDLEHSPTLINFTFPSKIKKITCGDNHTAIL 111
>WB|WBGene00017190 [details] [associations]
symbol:F07B7.12 species:6239 "Caenorhabditis elegans"
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR027047
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR012983 Pfam:PF08005 EMBL:FO081059
GeneTree:ENSGT00390000011403 KO:K10693 PANTHER:PTHR12846
eggNOG:NOG240798 RefSeq:NP_505281.1 ProteinModelPortal:Q965Y9
SMR:Q965Y9 STRING:Q965Y9 PaxDb:Q965Y9 EnsemblMetazoa:F07B7.12
GeneID:184118 KEGG:cel:CELE_F07B7.12 UCSC:F07B7.12 CTD:184118
WormBase:F07B7.12 InParanoid:Q965Y9 OMA:KESRITH NextBio:923582
Uniprot:Q965Y9
Length = 1900
Score = 146 (56.5 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 37/87 (42%), Positives = 51/87 (58%)
Query: 390 QAETL-P-RLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
Q TL P R++ + +V SVSCG HT ++A D +VF +G N +GQLG+GD + +N
Sbjct: 749 QRSTLHPSRVILSQGPHDVKVSSVSCGNFHTVLLASDRRVFTFGSNCHGQLGVGDTLSKN 808
Query: 448 IPSQVTIEG-CVPRNVACGWWHTLLLA 473
P QV + V VA G HT+L A
Sbjct: 809 TPQQVILPSDTVIVQVAAGSNHTILRA 835
Score = 104 (41.7 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 25/73 (34%), Positives = 37/73 (50%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
V ++CG H+ ++ + TFG +GQ G G T + +P V I VAAG
Sbjct: 769 VSSVSCGNFHTVLLASDRRVFTFGSNCHGQLGVGDTLSKNTPQQVILPSDTVIVQVAAGS 828
Query: 362 WHTICISSDGDVY 374
HTI ++DG V+
Sbjct: 829 NHTILRANDGSVF 841
Score = 70 (29.7 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 100 IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGT 141
I A G +H VAVT G ++TWG GRV +T +
Sbjct: 615 ISSLALGKSHGVAVTRNGHLFTWGLNNMNQCGRVESTSTTSS 656
Score = 63 (27.2 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 15/43 (34%), Positives = 20/43 (46%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ-GSTDDELSP 343
+ +A G H +T G L T+G QCG+ ST SP
Sbjct: 615 ISSLALGKSHGVAVTRNGHLFTWGLNNMNQCGRVESTSTTSSP 657
>FB|FBgn0000247 [details] [associations]
symbol:ca "claret" species:7227 "Drosophila melanogaster"
[GO:0006727 "ommochrome biosynthetic process" evidence=IMP]
[GO:0006856 "eye pigment precursor transport" evidence=TAS]
[GO:0017137 "Rab GTPase binding" evidence=IPI] [GO:0005622
"intracellular" evidence=IDA] [GO:0008057 "eye pigment granule
organization" evidence=IMP] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IPI] [GO:0017112 "Rab guanyl-nucleotide
exchange factor activity" evidence=IPI] [GO:0060967 "negative
regulation of gene silencing by RNA" evidence=IMP]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE014297 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS50012 GO:GO:0008057
GO:GO:0060967 GO:GO:0006727 GO:GO:0006856
GeneTree:ENSGT00700000104208 FlyBase:FBgn0000247 EMBL:BT057978
RefSeq:NP_733309.3 UniGene:Dm.6851 SMR:Q9VAG5 MINT:MINT-1644098
STRING:Q9VAG5 EnsemblMetazoa:FBtr0085484 GeneID:43518
KEGG:dme:Dmel_CG31037 UCSC:CG31037-RA CTD:43518 InParanoid:Q9VAG5
OMA:DNTLHIV GenomeRNAi:43518 NextBio:834351 Uniprot:Q9VAG5
Length = 1961
Score = 164 (62.8 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 55/205 (26%), Positives = 88/205 (42%)
Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG----QCGQGST 337
ALS +N E F + + K I+ G + A + D A + WG G Q ST
Sbjct: 1097 ALSNFRINYEDNQFAIESSRFKPISAGCAYCACVVDGTA---YFWGSSGIPSYYSAQKST 1153
Query: 338 DDELSPNCVSSL-----LGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAE 392
+ + V SL L +Q+ + G HT+ ++++G +Y+
Sbjct: 1154 EPPEPAHAVKSLDLLSQLNLQVHAIKCGRQHTLILTNNG-LYSLGNNNLCQLGIGRHMQM 1212
Query: 393 TLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
L +L +L+ ++ + G H A +AD GK++ WGW YGQLG G + P V
Sbjct: 1213 ALQPML-VTALDGMNITMLEAGQYHNAAVAD-GKLYMWGWGIYGQLGQGSCENIATPQLV 1270
Query: 453 TIEGCVP-RNVACGWWHTLLLAVPP 476
+ ++ G HTL+L P
Sbjct: 1271 SFFKFKKILQISLGHAHTLVLCGAP 1295
>FB|FBgn0002638 [details] [associations]
symbol:Rcc1 "Regulator of chromosome condensation 1 ortholog
(H. sapiens)" species:7227 "Drosophila melanogaster" [GO:0005634
"nucleus" evidence=ISS;NAS;IDA] [GO:0007417 "central nervous system
development" evidence=IDA] [GO:0030261 "chromosome condensation"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS;IDA]
[GO:0007076 "mitotic chromosome condensation" evidence=NAS]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISS;NAS] [GO:0005737 "cytoplasm" evidence=NAS] [GO:0007346
"regulation of mitotic cell cycle" evidence=IDA] [GO:0006607
"NLS-bearing substrate import into nucleus" evidence=IMP]
[GO:0000793 "condensed chromosome" evidence=IDA] [GO:0046822
"regulation of nucleocytoplasmic transport" evidence=IMP]
[GO:0050767 "regulation of neurogenesis" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0007346 GO:GO:0005737 EMBL:AE014296
GO:GO:0051301 GO:GO:0007067 GO:GO:0007417 GO:GO:0046822
GO:GO:0003682 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0050767 PDB:3MVD PDBsum:3MVD
GeneTree:ENSGT00700000104160 EMBL:X58530 EMBL:AY070540 PIR:S15028
RefSeq:NP_523943.1 RefSeq:NP_729118.1 RefSeq:NP_729119.1
UniGene:Dm.8023 ProteinModelPortal:P25171 SMR:P25171 DIP:DIP-17766N
IntAct:P25171 MINT:MINT-781282 STRING:P25171 PaxDb:P25171
EnsemblMetazoa:FBtr0077074 EnsemblMetazoa:FBtr0077075
EnsemblMetazoa:FBtr0077076 GeneID:38669 KEGG:dme:Dmel_CG10480
CTD:38669 FlyBase:FBgn0002638 InParanoid:P25171 KO:K11493
OMA:PFEAIWA OrthoDB:EOG437PW4 PhylomeDB:P25171 ChiTaRS:Bj1
GenomeRNAi:38669 NextBio:809817 Bgee:P25171 GermOnline:CG10480
Uniprot:P25171
Length = 547
Score = 156 (60.0 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 49/163 (30%), Positives = 79/163 (48%)
Query: 316 TDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGI-QIEGVAAGLWHTICISSDGDVY 374
T G +L G G GQ G G +D L +S + GI ++AG H + ++ GD+Y
Sbjct: 39 TVLGNVLVCGNGDVGQLGLG--EDILERKRLSPVAGIPDAVDISAGGMHNLVLTKSGDIY 96
Query: 375 AXX--XXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGW 432
+ D +E+ P L+D P + +S G H+A + +DG+VF WG
Sbjct: 97 SFGCNDEGALGRDTSEDGSESKPDLIDLPG----KALCISAGDSHSACLLEDGRVFAWGS 152
Query: 433 --NKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACGWWHTLLL 472
+ +G +GL ID N + + + EG V ++A G H ++L
Sbjct: 153 FRDSHGNMGL--TIDGNKRTPIDLMEGTVCCSIASGADHLVIL 193
Score = 132 (51.5 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 41/139 (29%), Positives = 67/139 (48%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDD--ELSPNCVSSLLGIQIEGVAAGLW 362
I+ GG H+ V+T +G + +FG G G+ +++D E P+ + L G + ++AG
Sbjct: 79 ISAGGMHNLVLTKSGDIYSFGCNDEGALGRDTSEDGSESKPDLID-LPGKAL-CISAGDS 136
Query: 363 HTICISSDGDVYA--XXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
H+ C+ DG V+A D + P +D +E S++ GA H +
Sbjct: 137 HSACLLEDGRVFAWGSFRDSHGNMGLTIDGNKRTP--IDL--MEGTVCCSIASGADHLVI 192
Query: 421 IADDGKVFCWGWNKYGQLG 439
+ GKVF G + GQLG
Sbjct: 193 LTTAGKVFTVGCAEQGQLG 211
>UNIPROTKB|H0YEL8 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860
EMBL:AC124058 EMBL:AC124078 Ensembl:ENST00000529151 Uniprot:H0YEL8
Length = 299
Score = 117 (46.2 bits), Expect = 0.00032, P = 0.00032
Identities = 41/145 (28%), Positives = 63/145 (43%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQ----GST----DDELSPNCVSSLLGIQIEG 356
IA G RH+ T +G + +G GL CG+ G T P+ V+ L +
Sbjct: 22 IAAGLRHAVAATASGIVFQWGTGL-ASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMC 80
Query: 357 VAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLP--RLLDAPSLENVHSKSVSCG 414
V AG H+ ++ G+VY ++A LP + ++A +N ++ G
Sbjct: 81 VLAGSDHSASLTDAGEVYVWGSNKHGQLA---NEAAFLPVPQKIEAHCFQNEKVTAIWSG 137
Query: 415 ARHTAVIADDGKVFCWGWNKYGQLG 439
H + GK+F WG YGQLG
Sbjct: 138 WTHLVAQTETGKMFTWGRADYGQLG 162
Score = 116 (45.9 bits), Expect = 0.00041, P = 0.00041
Identities = 39/137 (28%), Positives = 59/137 (43%)
Query: 342 SP-NCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDA 400
SP +C L ++ +AAGL H + ++ G V+ +TLP A
Sbjct: 6 SPESCCHMLHKEKVVCIAAGLRHAVAATASGIVFQWGTGLASCGRRLCP-GQTLPLFFTA 64
Query: 401 --PS----LENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI 454
PS LEN + V G+ H+A + D G+V+ WG NK+GQL + +P ++
Sbjct: 65 KEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLA-NEAAFLPVPQKIEA 123
Query: 455 EGCVPRNVAC---GWWH 468
V GW H
Sbjct: 124 HCFQNEKVTAIWSGWTH 140
Score = 99 (39.9 bits), Expect = 8.2e-08, Sum P(2) = 8.2e-08
Identities = 36/97 (37%), Positives = 44/97 (45%)
Query: 71 STDDLGQSYVT-SGKHGEIPE-----PFPLPTEASIV---KAAA---GWAHCVAVTEGGE 118
S D G+ YV S KHG++ P P EA K A GW H VA TE G+
Sbjct: 90 SLTDAGEVYVWGSNKHGQLANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGK 149
Query: 119 VYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFL 155
++TWG + GR L T G E+Q SFL
Sbjct: 150 MFTWGRADYGQLGR---KLETYEGWK---LEKQDSFL 180
Score = 94 (38.1 bits), Expect = 8.2e-08, Sum P(2) = 8.2e-08
Identities = 22/69 (31%), Positives = 34/69 (49%)
Query: 411 VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRN---VACGWW 467
VSCG+ H I G + WGWN++G G D + N+ + ++ + + V CG
Sbjct: 202 VSCGSEHNLAIIG-GVCYSWGWNEHGMCG--DGTEANVWAPKPVQALLSSSGLLVGCGAG 258
Query: 468 HTLLLAVPP 476
H+L L P
Sbjct: 259 HSLALCQLP 267
Score = 90 (36.7 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 18/63 (28%), Positives = 31/63 (49%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
++CG H+ I G ++GW +G CG G+ + +P V +LL V G H+
Sbjct: 202 VSCGSEHNLAII-GGVCYSWGWNEHGMCGDGTEANVWAPKPVQALLSSSGLLVGCGAGHS 260
Query: 365 ICI 367
+ +
Sbjct: 261 LAL 263
Score = 60 (26.2 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 105 AGWAHCVAVTEGGEVYTWG 123
AG H ++T+ GEVY WG
Sbjct: 83 AGSDHSASLTDAGEVYVWG 101
Score = 60 (26.2 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 100 IVKAAAGWAHCVAVTEGGEVYTWG 123
+V AAG H VA T G V+ WG
Sbjct: 19 VVCIAAGLRHAVAATASGIVFQWG 42
Score = 52 (23.4 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
V I G H T+ G + T+G YGQ G+
Sbjct: 131 VTAIWSGWTHLVAQTETGKMFTWGRADYGQLGR 163
>WB|WBGene00004457 [details] [associations]
symbol:rpm-1 species:6239 "Caenorhabditis elegans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0050807 "regulation of synapse organization" evidence=IGI;IMP]
[GO:0040011 "locomotion" evidence=IGI] [GO:0043409 "negative
regulation of MAPK cascade" evidence=IGI] [GO:0031647 "regulation
of protein stability" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0018991 "oviposition"
evidence=IMP] [GO:0030424 "axon" evidence=IDA] [GO:0031594
"neuromuscular junction" evidence=IDA] [GO:0045202 "synapse"
evidence=IDA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0031435 "mitogen-activated protein kinase kinase
kinase binding" evidence=IPI] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR027047 Pfam:PF00643 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
INTERPRO:IPR000408 Pfam:PF00415 Prosite:PS00518 GO:GO:0005634
GO:GO:0018991 GO:GO:0006915 GO:GO:0006355 GO:GO:0046872
GO:GO:0030424 GO:GO:0008270 GO:GO:0031594 GO:GO:0010171
GO:GO:0040011 GO:GO:0006351 GO:GO:0031647 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
PROSITE:PS51284 GO:GO:0043409 InterPro:IPR012983 Pfam:PF08005
GO:GO:0050807 GeneTree:ENSGT00390000011403 KO:K10693
PANTHER:PTHR12846 eggNOG:NOG240798 EMBL:FO080217 PIR:T29165
RefSeq:NP_505267.1 ProteinModelPortal:Q17551 SMR:Q17551
STRING:Q17551 PaxDb:Q17551 EnsemblMetazoa:C01B7.6 GeneID:179259
KEGG:cel:CELE_C01B7.6 UCSC:C01B7.6 CTD:179259 WormBase:C01B7.6
HOGENOM:HOG000016145 InParanoid:Q17551 OMA:LLSILHW NextBio:904596
Uniprot:Q17551
Length = 3766
Score = 146 (56.5 bits), Expect = 8.5e-08, Sum P(2) = 8.5e-08
Identities = 37/87 (42%), Positives = 51/87 (58%)
Query: 390 QAETL-P-RLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
Q TL P R++ + +V SVSCG HT ++A D +VF +G N +GQLG+GD + +N
Sbjct: 749 QRSTLHPSRVILSQGPHDVKVSSVSCGNFHTVLLASDRRVFTFGSNCHGQLGVGDTLSKN 808
Query: 448 IPSQVTIEG-CVPRNVACGWWHTLLLA 473
P QV + V VA G HT+L A
Sbjct: 809 TPQQVILPSDTVIVQVAAGSNHTILRA 835
Score = 70 (29.7 bits), Expect = 8.5e-08, Sum P(2) = 8.5e-08
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 100 IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGT 141
I A G +H VAVT G ++TWG GRV +T +
Sbjct: 615 ISSLALGKSHGVAVTRNGHLFTWGLNNMNQCGRVESTSTTSS 656
Score = 63 (27.2 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 15/43 (34%), Positives = 20/43 (46%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ-GSTDDELSP 343
+ +A G H +T G L T+G QCG+ ST SP
Sbjct: 615 ISSLALGKSHGVAVTRNGHLFTWGLNNMNQCGRVESTSTTSSP 657
>UNIPROTKB|F1MD33 [details] [associations]
symbol:F1MD33 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0005929 "cilium" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104160 EMBL:DAAA02073693
IPI:IPI00698306 Ensembl:ENSBTAT00000005090 OMA:SAEKHET
Uniprot:F1MD33
Length = 158
Score = 114 (45.2 bits), Expect = 9.4e-08, Sum P(2) = 9.4e-08
Identities = 33/84 (39%), Positives = 45/84 (53%)
Query: 288 VNSEGPGFRVPG--NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS-PN 344
VN + P VPG V +ACGG H+ V+T+ A+ TFG G +GQ G G+ E S P
Sbjct: 77 VNHKVPQL-VPGISEKVIQVACGGGHTVVLTEK-AVYTFGLGQFGQLGLGTFTFETSEPK 134
Query: 345 CVSSLLGIQIEGVAAGLWHTICIS 368
+ S+ +I V G HT I+
Sbjct: 135 VIESVKDKKISHVCCGENHTALIT 158
Score = 110 (43.8 bits), Expect = 0.00010, P = 0.00010
Identities = 40/159 (25%), Positives = 74/159 (46%)
Query: 319 GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGI-QIEGVAAGLWHTICISSDGDVYAXX 377
G + G GQ G G TD+ + + +S +I+ ++AG + ++++G++Y
Sbjct: 3 GQVYATGGNNEGQLGLGDTDERSAFHLISFFTSQHKIKQLSAGSNTSAALTAEGELYTFG 62
Query: 378 XXXXXXXXXXXDQA--ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKY 435
+P+L+ S E V V+CG HT V+ + V+ +G ++
Sbjct: 63 EPESGKLGLPPKLLVNHKVPQLVPGIS-EKVIQ--VACGGGHTVVLTEKA-VYTFGLGQF 118
Query: 436 GQLGLGD-VIDRNIPSQV-TIEGCVPRNVACGWWHTLLL 472
GQLGLG + + P + +++ +V CG HT L+
Sbjct: 119 GQLGLGTFTFETSEPKVIESVKDKKISHVCCGENHTALI 157
Score = 45 (20.9 bits), Expect = 9.4e-08, Sum P(2) = 9.4e-08
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 96 TEASIVKAAAGWAHCVAVTEGGEVYTWGWKE 126
++ I + +AG A+T GE+YT+G E
Sbjct: 35 SQHKIKQLSAGSNTSAALTAEGELYTFGEPE 65
>UNIPROTKB|C9J3R0 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341
IPI:IPI00926548 ProteinModelPortal:C9J3R0 SMR:C9J3R0 STRING:C9J3R0
PRIDE:C9J3R0 Ensembl:ENST00000434290 ArrayExpress:C9J3R0
Bgee:C9J3R0 Uniprot:C9J3R0
Length = 273
Score = 144 (55.7 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 47/158 (29%), Positives = 70/158 (44%)
Query: 277 KDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGR-HSAVITDAGALLTFGWGLYGQCGQG 335
+DR + R + P +P + K + R HS T+ G +LT G G GQ G G
Sbjct: 5 EDRKMSPKRIAKRRSPPADAIPKS--KKVKVSHRSHS---TEPGLVLTLGQGDVGQLGLG 59
Query: 336 STDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXX--XXXXXXXXXXXDQAET 393
E + S+ ++ A G+ HT+C+S G VY+ + +E
Sbjct: 60 ENVMERKKPALVSIPEDVVQAEAGGM-HTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEM 118
Query: 394 LPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWG 431
+P ++ E V VS G HTA + DDG+VF WG
Sbjct: 119 VPGKVELQ--EKV--VQVSAGDSHTAALTDDGRVFLWG 152
>GENEDB_PFALCIPARUM|PFE0420c [details] [associations]
symbol:PFE0420c "guanidine nucleotide exchange
factor, putative" species:5833 "Plasmodium falciparum" [GO:0006323
"DNA packaging" evidence=ISS] [GO:0020011 "apicoplast"
evidence=RCA] INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0006323 EMBL:AL844504
GenomeReviews:AL844504_GR RefSeq:XP_001351643.1
ProteinModelPortal:Q8I418 EnsemblProtists:PFE0420c:mRNA
GeneID:812857 KEGG:pfa:PFE0420c EuPathDB:PlasmoDB:PF3D7_0508500
HOGENOM:HOG000284105 ProtClustDB:CLSZ2446497 Uniprot:Q8I418
Length = 2606
Score = 106 (42.4 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
Identities = 35/136 (25%), Positives = 58/136 (42%)
Query: 300 NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAA 359
N V + G +HS G + ++G+G G+ G G+ P + L +I V A
Sbjct: 439 NVVIHCSAGSKHSLACNLHGDIYSWGYGGNGRLGLGNIKSYNKPQLIKGLRNKRILYVCA 498
Query: 360 GLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETL-PRLLDAPSLENVHSKSV---SCGA 415
G H+ CI S+ +VY D + P+L++ + H+K V S G
Sbjct: 499 GTSHSGCIDSNYNVYTWGNGKFYKLGHGNDDIDIYYPKLVECLN----HNKKVCMLSFGC 554
Query: 416 RHTAVIADDGKVFCWG 431
++ + G V+ WG
Sbjct: 555 FNSLALNVKGDVYVWG 570
Score = 81 (33.6 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
Identities = 19/64 (29%), Positives = 37/64 (57%)
Query: 414 GARHTAV-IADDGKVFCWGWNKYGQLGLGDV-IDRNIPSQVTIEGCVPR--NVACGWWHT 469
G+ H +V + + GKV+ G+NK G+LG G+ + + + + CV + +ACG+ +
Sbjct: 759 GSDHFSVFLLESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLNICVNKIIKIACGYNYV 818
Query: 470 LLLA 473
L ++
Sbjct: 819 LCVS 822
Score = 70 (29.7 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
Identities = 21/70 (30%), Positives = 36/70 (51%)
Query: 91 PFPL----PTEASIVK-AAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDK 145
PFP+ P + + +K + G H +A+ GG +Y+WG+ FG + GT ++
Sbjct: 337 PFPMKIVFPKKNTKIKFISCGDMHTLAICTGGVLYSWGYNN-------FGCIGNGT--NQ 387
Query: 146 DVFERQSSFL 155
+V+E FL
Sbjct: 388 NVYEPTPIFL 397
Score = 43 (20.2 bits), Expect = 0.00033, Sum P(4) = 0.00033
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 102 KAAAGWAH--CVAVTEGG-EVYTWGWKEC 127
K + G H CVA + ++TWG C
Sbjct: 21 KISTGLDHYACVAYYKNKPSIFTWGGNSC 49
Score = 37 (18.1 bits), Expect = 0.00033, Sum P(4) = 0.00033
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 211 FPCLVTL-NPGVRIATVAAGGRHTLAL 236
FP + +I ++ G HTLA+
Sbjct: 338 FPMKIVFPKKNTKIKFISCGDMHTLAI 364
>UNIPROTKB|Q8I418 [details] [associations]
symbol:RCC1 "Guanidine nucleotide exchange factor"
species:36329 "Plasmodium falciparum 3D7" [GO:0006323 "DNA
packaging" evidence=ISS] [GO:0020011 "apicoplast" evidence=RCA]
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0006323 EMBL:AL844504
GenomeReviews:AL844504_GR RefSeq:XP_001351643.1
ProteinModelPortal:Q8I418 EnsemblProtists:PFE0420c:mRNA
GeneID:812857 KEGG:pfa:PFE0420c EuPathDB:PlasmoDB:PF3D7_0508500
HOGENOM:HOG000284105 ProtClustDB:CLSZ2446497 Uniprot:Q8I418
Length = 2606
Score = 106 (42.4 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
Identities = 35/136 (25%), Positives = 58/136 (42%)
Query: 300 NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAA 359
N V + G +HS G + ++G+G G+ G G+ P + L +I V A
Sbjct: 439 NVVIHCSAGSKHSLACNLHGDIYSWGYGGNGRLGLGNIKSYNKPQLIKGLRNKRILYVCA 498
Query: 360 GLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETL-PRLLDAPSLENVHSKSV---SCGA 415
G H+ CI S+ +VY D + P+L++ + H+K V S G
Sbjct: 499 GTSHSGCIDSNYNVYTWGNGKFYKLGHGNDDIDIYYPKLVECLN----HNKKVCMLSFGC 554
Query: 416 RHTAVIADDGKVFCWG 431
++ + G V+ WG
Sbjct: 555 FNSLALNVKGDVYVWG 570
Score = 81 (33.6 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
Identities = 19/64 (29%), Positives = 37/64 (57%)
Query: 414 GARHTAV-IADDGKVFCWGWNKYGQLGLGDV-IDRNIPSQVTIEGCVPR--NVACGWWHT 469
G+ H +V + + GKV+ G+NK G+LG G+ + + + + CV + +ACG+ +
Sbjct: 759 GSDHFSVFLLESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLNICVNKIIKIACGYNYV 818
Query: 470 LLLA 473
L ++
Sbjct: 819 LCVS 822
Score = 70 (29.7 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
Identities = 21/70 (30%), Positives = 36/70 (51%)
Query: 91 PFPL----PTEASIVK-AAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDK 145
PFP+ P + + +K + G H +A+ GG +Y+WG+ FG + GT ++
Sbjct: 337 PFPMKIVFPKKNTKIKFISCGDMHTLAICTGGVLYSWGYNN-------FGCIGNGT--NQ 387
Query: 146 DVFERQSSFL 155
+V+E FL
Sbjct: 388 NVYEPTPIFL 397
Score = 43 (20.2 bits), Expect = 0.00033, Sum P(4) = 0.00033
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 102 KAAAGWAH--CVAVTEGG-EVYTWGWKEC 127
K + G H CVA + ++TWG C
Sbjct: 21 KISTGLDHYACVAYYKNKPSIFTWGGNSC 49
Score = 37 (18.1 bits), Expect = 0.00033, Sum P(4) = 0.00033
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 211 FPCLVTL-NPGVRIATVAAGGRHTLAL 236
FP + +I ++ G HTLA+
Sbjct: 338 FPMKIVFPKKNTKIKFISCGDMHTLAI 364
>UNIPROTKB|J9NZT9 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 EMBL:AAEX03016754 EMBL:AAEX03016753
Ensembl:ENSCAFT00000045241 Uniprot:J9NZT9
Length = 865
Score = 152 (58.6 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 30/72 (41%), Positives = 45/72 (62%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
I+CG H+AV+T +G + TFG G GQ G S +DE++P V L+G ++ +A G HT
Sbjct: 62 ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT 121
Query: 365 IC-ISSDGDVYA 375
+ + S G +YA
Sbjct: 122 LAFVPSSGLIYA 133
Score = 127 (49.8 bits), Expect = 0.00013, P = 0.00013
Identities = 40/135 (29%), Positives = 59/135 (43%)
Query: 324 FGWGLY--GQCGQGSTDDELSPNCVSSLLGIQ-IEGVAAGLWHTICISSDGDVYAXXXXX 380
FGWG+ GQ G +D SP C LL Q + ++ G HT ++ G V+
Sbjct: 27 FGWGMNNAGQLGLSDEEDRESP-CHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 85
Query: 381 XXXXXXXXDQAETLPRLLDAPSLENVHSK--SVSCGARHT-AVIADDGKVFCWGWNKYGQ 437
E PR + LE + S+ ++CG +HT A + G ++ +G GQ
Sbjct: 86 CGQLGHDSMNDEVNPRRV----LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAKGQ 141
Query: 438 LGLGDVIDRNIPSQV 452
LG G + PS V
Sbjct: 142 LGTGHTCNVKCPSPV 156
>WB|WBGene00017195 [details] [associations]
symbol:glo-4 species:6239 "Caenorhabditis elegans"
[GO:0019915 "lipid storage" evidence=IMP] [GO:0045202 "synapse"
evidence=IDA] [GO:0030424 "axon" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0030424 GO:GO:0045202 GO:GO:0019915
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104208 EMBL:FO081074
PIR:T28816 PIR:T28817 RefSeq:NP_505392.2 ProteinModelPortal:Q5DX34
SMR:Q5DX34 STRING:Q5DX34 PaxDb:Q5DX34 EnsemblMetazoa:F07C3.4
GeneID:179306 KEGG:cel:CELE_F07C3.4 UCSC:F07C3.4 CTD:179306
WormBase:F07C3.4 HOGENOM:HOG000021586 InParanoid:Q5DX34 OMA:MANHEDV
NextBio:904820 Uniprot:Q5DX34
Length = 1392
Score = 163 (62.4 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 45/178 (25%), Positives = 82/178 (46%)
Query: 298 PGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGV 357
PG + IACG H V++ +G L +G +GQCG G + + + V IE +
Sbjct: 774 PGGRPRAIACGAEHILVLSSSGQLSAWGGNRFGQCGVGHSFRIANLHQVDGDWPA-IEKI 832
Query: 358 AAGLWHTICISSDGDVYAXXXXX--XXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGA 415
A G +H+ I SDG ++ + + +P ++ + ++CG
Sbjct: 833 ACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVNGLICKVTQ---IACGR 889
Query: 416 RHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIP-SQVTIEGCVPRNVACGWWHTLLL 472
HT V+ D G+V G YGQ+G+ D I + + + + R++A ++H++ +
Sbjct: 890 AHTVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPLGPLRVRDIATHYYHSICI 947
Score = 160 (61.4 bits), Expect = 4.6e-07, Sum P(3) = 4.6e-07
Identities = 42/142 (29%), Positives = 69/142 (48%)
Query: 296 RVPGNY--VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG--STDDELSPNCVSSLLG 351
+V G++ ++ IACG HSA I G+L TFGWG++GQ G G + ++L P V+ L+
Sbjct: 821 QVDGDWPAIEKIACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVNGLI- 879
Query: 352 IQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSV 411
++ +A G HT+ ++ G V D + P L + + +
Sbjct: 880 CKVTQIACGRAHTVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFA-FTPLP-LGPLRVRDI 937
Query: 412 SCGARHTAVIADDGKVFCWGWN 433
+ H+ I +D +VF WG N
Sbjct: 938 ATHYYHSICITEDNRVFEWGRN 959
Score = 135 (52.6 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 32/77 (41%), Positives = 44/77 (57%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
GN V +ACG HSA+IT G L T+G GL Q G G+ ++ + P+ V G + V+
Sbjct: 1022 GNIVS-VACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERMEPHQVFEPNGAKWVNVS 1080
Query: 359 AGLWHTICISSDGDVYA 375
G HTI + DG V+A
Sbjct: 1081 LGNNHTIASTDDGSVFA 1097
Score = 113 (44.8 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 31/102 (30%), Positives = 42/102 (41%)
Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLL 398
++L V L I VA GL H+ I+S+G +Y P +
Sbjct: 1009 EDLGLREVKHFLDGNIVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERMEPHQV 1068
Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL 440
P+ +VS G HT DDG VF WG N +GQ G+
Sbjct: 1069 FEPN--GAKWVNVSLGNNHTIASTDDGSVFAWGKNDFGQCGV 1108
Score = 68 (29.0 bits), Expect = 6.2e-07, Sum P(3) = 6.2e-07
Identities = 29/110 (26%), Positives = 46/110 (41%)
Query: 20 LPGALPQRSPILSPLVVRLPLTVGSAWRDV-CGGGCGFAMAISDSRKLITWGSTD----D 74
LP P+ L P V+ P G R + CG + +S S +L WG
Sbjct: 756 LPPPAPKPEQHL-PRVLEYP---GGRPRAIACGAE--HILVLSSSGQLSAWGGNRFGQCG 809
Query: 75 LGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGW 124
+G S+ + H ++ +P +I K A G H + G ++T+GW
Sbjct: 810 VGHSFRIANLH-QVDGDWP-----AIEKIACGQFHSAFICSDGSLWTFGW 853
Score = 66 (28.3 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 23/76 (30%), Positives = 37/76 (48%)
Query: 54 CGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPF---PLPTEASIVK-AAAGW 107
CG A + ++D+ +++ GS G SY G +I + F PLP V+ A +
Sbjct: 887 CGRAHTVVLTDTGRVLVCGS----G-SYGQMGVDDDIKKVFAFTPLPLGPLRVRDIATHY 941
Query: 108 AHCVAVTEGGEVYTWG 123
H + +TE V+ WG
Sbjct: 942 YHSICITEDNRVFEWG 957
Score = 44 (20.5 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 100 IVKAAAGWAHCVAVTEGGEVYTWG 123
+ + A G AH V +T+ G V G
Sbjct: 882 VTQIACGRAHTVVLTDTGRVLVCG 905
Score = 43 (20.2 bits), Expect = 4.6e-07, Sum P(3) = 4.6e-07
Identities = 9/19 (47%), Positives = 10/19 (52%)
Query: 219 PGVRIATVAAGGRHTLALS 237
PG R +A G H L LS
Sbjct: 774 PGGRPRAIACGAEHILVLS 792
Score = 39 (18.8 bits), Expect = 6.2e-07, Sum P(3) = 6.2e-07
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 222 RIATVAAGGRHTLALSD 238
++ +A G HT+ L+D
Sbjct: 881 KVTQIACGRAHTVVLTD 897
Score = 38 (18.4 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 51 GGGCGFAMAISDSRKLITWGS 71
G CG I++ +L+ WG+
Sbjct: 708 GNNCG--ATITEDDRLMIWGN 726
>UNIPROTKB|E9PR50 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 IPI:IPI00983666 ProteinModelPortal:E9PR50 SMR:E9PR50
Ensembl:ENST00000530613 ArrayExpress:E9PR50 Bgee:E9PR50
Uniprot:E9PR50
Length = 165
Score = 125 (49.1 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 44/165 (26%), Positives = 71/165 (43%)
Query: 314 VITDAGALLTFGWGLYGQCGQGSTDDE-LSPNCVSSLLGIQIEGVAAGLWHTICISSDGD 372
++T+ G +L+ G +GQ G + P + L ++ +AAGL H + ++ G
Sbjct: 1 MLTENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIE-LHKEKVVCIAAGLRHAVAATASGI 59
Query: 373 VYAXXXXXXXXXXXXXDQAETLPRLLDA--PS----LENVHSKSVSCGARHTAVIADDGK 426
V+ +TLP A PS LEN + V G+ H+A + D G+
Sbjct: 60 VFQWGTGLASCGRRLCP-GQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGE 118
Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVAC---GWWH 468
V+ WG NK+GQL + +P ++ V GW H
Sbjct: 119 VYVWGSNKHGQLA-NEAAFLPVPQKIEAHCFQNEKVTAIWSGWTH 162
>DICTYBASE|DDB_G0282381 [details] [associations]
symbol:gefC "Ras nucleotide exchange factor"
species:44689 "Dictyostelium discoideum" [GO:0051056 "regulation of
small GTPase mediated signal transduction" evidence=IEA]
[GO:0035023 "regulation of Rho protein signal transduction"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005089 "Rho guanyl-nucleotide exchange factor
activity" evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] InterPro:IPR000219
InterPro:IPR000651 InterPro:IPR001895 InterPro:IPR008937
InterPro:IPR019804 Pfam:PF00617 Pfam:PF00618 Pfam:PF00621
PROSITE:PS00720 PROSITE:PS00741 PROSITE:PS50009 PROSITE:PS50010
PROSITE:PS50212 SMART:SM00147 SMART:SM00229 dictyBase:DDB_G0282381
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0007264 EMBL:AAFI02000047
GenomeReviews:CM000152_GR GO:GO:0005622 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
Gene3D:1.10.840.10 InterPro:IPR023578 SUPFAM:SSF48366
PANTHER:PTHR23113 HSSP:Q07889 EMBL:AY160092 RefSeq:XP_640241.1
ProteinModelPortal:Q8IS20 STRING:Q8IS20 EnsemblProtists:DDB0215004
GeneID:8623780 KEGG:ddi:DDB_G0282381 InParanoid:Q8IS20 OMA:SIATIRG
Uniprot:Q8IS20
Length = 1457
Score = 128 (50.1 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 23/62 (37%), Positives = 41/62 (66%)
Query: 409 KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWW 467
K ++ G ++TA + + G+++ WG N++G+LGLGD IDR P++V ++ V +AC
Sbjct: 417 KYIATGVKNTAALTEWGELYMWGINEHGELGLGDTIDRRTPTRVIRLKNEVVSTIACSST 476
Query: 468 HT 469
H+
Sbjct: 477 HS 478
Score = 74 (31.1 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 320 ALLTFGWGLYGQCGQGS-TDDEL-SPNCVSSLLGI--QIEGVAAGLWHTICISSDGDVY 374
++ TFG G G G G TDD +P V+ I +++ VA G +HT+ ++ D +Y
Sbjct: 2 SVFTFGHGSNGALGLGKITDDTCPTPQKVNYFTEIDKRVKKVACGSYHTVFVTDDEHLY 60
Score = 69 (29.3 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 17/34 (50%), Positives = 20/34 (58%)
Query: 90 EPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
E PL T I + A G H V +TEGG V+TWG
Sbjct: 328 ENSPLNT---IKQVALGNYHIVLLTEGGNVWTWG 358
Score = 63 (27.2 bits), Expect = 3.2e-06, Sum P(3) = 3.2e-06
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 298 PGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCG 333
P N +K +A G H ++T+ G + T+G GQ G
Sbjct: 331 PLNTIKQVALGNYHIVLLTEGGNVWTWGSNSNGQLG 366
Score = 49 (22.3 bits), Expect = 0.00031, Sum P(3) = 0.00031
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 302 VKGIACGGRHSAVITD 317
VK +ACG H+ +TD
Sbjct: 40 VKKVACGSYHTVFVTD 55
Score = 45 (20.9 bits), Expect = 3.2e-06, Sum P(3) = 3.2e-06
Identities = 18/59 (30%), Positives = 24/59 (40%)
Query: 70 GSTDDLGQSYVTSGKHGEIPEPFPLPTEAS--IVKAAAGWAHCVAVTEGGEVYTWGWKE 126
GS LG +T P+ TE + K A G H V VT+ +Y G K+
Sbjct: 9 GSNGALGLGKITDDTC-PTPQKVNYFTEIDKRVKKVACGSYHTVFVTDDEHLYICGIKK 66
Score = 39 (18.8 bits), Expect = 0.00031, Sum P(3) = 0.00031
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 354 IEGVAAGLWHTICISSDGDVY 374
I+ VA G +H + ++ G+V+
Sbjct: 335 IKQVALGNYHIVLLTEGGNVW 355
Score = 38 (18.4 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 222 RIATVAAGGRHTLALSD 238
R+ VA G HT+ ++D
Sbjct: 39 RVKKVACGSYHTVFVTD 55
>UNIPROTKB|E9PS70 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 IPI:IPI00985461 ProteinModelPortal:E9PS70 SMR:E9PS70
Ensembl:ENST00000532389 ArrayExpress:E9PS70 Bgee:E9PS70
Uniprot:E9PS70
Length = 137
Score = 123 (48.4 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 39/132 (29%), Positives = 62/132 (46%)
Query: 314 VITDAGALLTFGWGLYGQCGQGSTDDE-LSPNCVSSLLGIQIEGVAAGLWHTICISSDGD 372
++T+ G +L+ G +GQ G + P + L ++ +AAGL H + ++ G
Sbjct: 1 MLTENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIE-LHKEKVVCIAAGLRHAVAATASGI 59
Query: 373 VYAXXXXXXXXXXXXXDQAETLPRLLDA--PS----LENVHSKSVSCGARHTAVIADDGK 426
V+ +TLP A PS LEN + V G+ H+A + D G+
Sbjct: 60 VFQWGTGLASCGRRLCP-GQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGE 118
Query: 427 VFCWGWNKYGQL 438
V+ WG NK+GQL
Sbjct: 119 VYVWGSNKHGQL 130
>WB|WBGene00021461 [details] [associations]
symbol:nekl-1 species:6239 "Caenorhabditis elegans"
[GO:0004672 "protein kinase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0004713 "protein tyrosine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 GO:GO:0005524 eggNOG:COG0515
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 EMBL:FO081209
KO:K08857 GeneTree:ENSGT00700000104137 RefSeq:NP_490968.2
ProteinModelPortal:Q6AW07 SMR:Q6AW07 EnsemblMetazoa:Y39G10AR.3
GeneID:189769 KEGG:cel:CELE_Y39G10AR.3 UCSC:Y39G10AR.3 CTD:189769
WormBase:Y39G10AR.3 HOGENOM:HOG000017263 InParanoid:Q6AW07
OMA:RNDNTEL NextBio:943564 Uniprot:Q6AW07
Length = 998
Score = 149 (57.5 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 41/140 (29%), Positives = 60/140 (42%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
+K +A H+ V+T+ L FG GQ G G + V SL G I+ V G
Sbjct: 469 IKQVALSKTHTMVLTNDNELFGFGDNSCGQLGFGKFSKMENGRLVESLKGRDIQSVGVGN 528
Query: 362 WHTICISSDGDVYAXXXXXXXXXXXXX-DQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
+ ++ G + D A+ P LL+ EN+ K + CG H
Sbjct: 529 YFSVICCDRGTLLTFGTAKNLGLGKDAKDSAK--PMLLEQLLRENI--KDIYCGHDHVVA 584
Query: 421 IADDGKVFCWGWNKYGQLGL 440
+ + G+ WG N+YGQLGL
Sbjct: 585 VLESGECLGWGSNQYGQLGL 604
>RGD|1563497 [details] [associations]
symbol:Sergef "secretion regulating guanine nucleotide exchange
factor" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA;ISO] [GO:0050709 "negative regulation of
protein secretion" evidence=IEA;ISO] InterPro:IPR027048 RGD:1563497
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005730 GO:GO:0045111
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
GeneTree:ENSGT00700000104160 OrthoDB:EOG4J1183
PANTHER:PTHR22870:SF7 IPI:IPI00360920 Ensembl:ENSRNOT00000015352
UCSC:RGD:1563497 Uniprot:D3ZN16
Length = 339
Score = 142 (55.0 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 42/133 (31%), Positives = 54/133 (40%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
+K + GG HS V+TD G L G GQ G G T++ L LLG I VA G
Sbjct: 51 IKSVTGGGGHSVVVTDGGGLFVCGLNKDGQLGLGHTEEVLRFTICKPLLGCPIRQVACGW 110
Query: 362 WHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAP-SLENVHSK--SVSCGARHT 418
TI ++ G V + PR P ++E + K V+ G RH
Sbjct: 111 DFTIMLTEKGQVLSCGSNAFGQLGVPHG-----PRKCVVPQAIECLREKVVCVAAGLRHA 165
Query: 419 AVIADDGKVFCWG 431
D G F WG
Sbjct: 166 LATTDTGSTFQWG 178
Score = 123 (48.4 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 30/67 (44%), Positives = 39/67 (58%)
Query: 409 KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG---DVIDRNIPSQVTIEGCVPRNVACG 465
KSV+ G H+ V+ D G +F G NK GQLGLG +V+ I + GC R VACG
Sbjct: 52 KSVTGGGGHSVVVTDGGGLFVCGLNKDGQLGLGHTEEVLRFTICKPLL--GCPIRQVACG 109
Query: 466 WWHTLLL 472
W T++L
Sbjct: 110 WDFTIML 116
Score = 117 (46.2 bits), Expect = 0.00041, P = 0.00041
Identities = 42/150 (28%), Positives = 65/150 (43%)
Query: 318 AGALLTFGWGL--YGQCGQGSTDDELSPNCVSSLLGIQ-IEGVAAGLWHTICISSDGDVY 374
A A+L F WG YGQ G G +D L P +S I+ V G H++ ++ G ++
Sbjct: 13 AAAVL-FAWGANSYGQLGLGHKEDVLLPQQLSDFCKSGCIKSVTGGGGHSVVVTDGGGLF 71
Query: 375 AXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNK 434
+ E L + P L + V+CG T ++ + G+V G N
Sbjct: 72 VCGLNKDGQLGLGHTE-EVLRFTICKPLL-GCPIRQVACGWDFTIMLTEKGQVLSCGSNA 129
Query: 435 YGQLGLGDVIDRNIPSQVTIEGCVPRNVAC 464
+GQLG+ + + Q IE C+ V C
Sbjct: 130 FGQLGVPHGPRKCVVPQA-IE-CLREKVVC 157
Score = 111 (44.1 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 40/144 (27%), Positives = 59/144 (40%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQ----C-GQGS----TDDELSPNCVSSLLGIQIE 355
+A G RH+ TD G+ +G GL C GQ T E P+ V+ L +
Sbjct: 158 VAAGLRHALATTDTGSTFQWGTGLASSGRRLCPGQNLPLFLTAKE--PSRVTGLESSTVV 215
Query: 356 GVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGA 415
AG H+ ++ G++Y LP+ ++A ++ +V G
Sbjct: 216 CAVAGSDHSASLTDTGELYVWGRNKHGQLASLATFLP-LPQRVEAHYFQDEKVTAVWSGW 274
Query: 416 RHTAVIADDGKVFCWGWNKYGQLG 439
H + GKVF WG YGQLG
Sbjct: 275 THLVAKTETGKVFTWGRADYGQLG 298
Score = 61 (26.5 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 17/66 (25%), Positives = 32/66 (48%)
Query: 59 AISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWA-HCVAVTEGG 117
A+S + L WG+ + GQ + + +P+ ++ +K+ G H V VT+GG
Sbjct: 10 AVSAAAVLFAWGA-NSYGQLGLGHKEDVLLPQQLSDFCKSGCIKSVTGGGGHSVVVTDGG 68
Query: 118 EVYTWG 123
++ G
Sbjct: 69 GLFVCG 74
Score = 45 (20.9 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 222 RIATVAAGGRHTLALSD 238
++ VAAG RH LA +D
Sbjct: 154 KVVCVAAGLRHALATTD 170
>UNIPROTKB|F1NXI7 [details] [associations]
symbol:SERGEF "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0050709 "negative regulation of protein
secretion" evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104160 PANTHER:PTHR22870:SF7
EMBL:AADN02030419 EMBL:AADN02030421 EMBL:AADN02030420
IPI:IPI00587804 Ensembl:ENSGALT00000010065 Uniprot:F1NXI7
Length = 231
Score = 136 (52.9 bits), Expect = 9.0e-07, P = 9.0e-07
Identities = 42/132 (31%), Positives = 57/132 (43%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
+K IA GG HSAVIT AG L G GQ G T+D L ++L G ++ VA G
Sbjct: 52 IKSIAGGGGHSAVITGAGELFVCGHNKAGQLGLNHTEDVLCFTLCTALSGFCVQEVACGW 111
Query: 362 WHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSV--SCGARHTA 419
TI + G V + P L+ +++ K+V + G RH
Sbjct: 112 DFTIILGRAGLVLSCGSNAFGQLGVPQISG---PCLIPQKIKQSLKEKAVGIAAGLRHAL 168
Query: 420 VIADDGKVFCWG 431
+ G VF WG
Sbjct: 169 AATESGLVFQWG 180
Score = 120 (47.3 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 31/80 (38%), Positives = 44/80 (55%)
Query: 394 LPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT 453
+P+LL S + KS++ G H+AVI G++F G NK GQLGL D + T
Sbjct: 38 VPQLLKDVSCKCQDIKSIAGGGGHSAVITGAGELFVCGHNKAGQLGLNHTEDVLCFTLCT 97
Query: 454 -IEGCVPRNVACGWWHTLLL 472
+ G + VACGW T++L
Sbjct: 98 ALSGFCVQEVACGWDFTIIL 117
>WB|WBGene00012370 [details] [associations]
symbol:W09G3.7 species:6239 "Caenorhabditis elegans"
[GO:0045132 "meiotic chromosome segregation" evidence=IMP]
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0045132 PRINTS:PR00633
PROSITE:PS50012 EMBL:AL032625 GeneTree:ENSGT00700000104312
EMBL:Z82080 EMBL:AL023854 RefSeq:NP_001021671.2
ProteinModelPortal:G5EEZ1 SMR:G5EEZ1 PRIDE:G5EEZ1
EnsemblMetazoa:W09G3.7a GeneID:173245 KEGG:cel:CELE_W09G3.7
CTD:173245 WormBase:W09G3.7a OMA:RKKVDCA NextBio:878861
Uniprot:G5EEZ1
Length = 404
Score = 141 (54.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 62/208 (29%), Positives = 95/208 (45%)
Query: 270 CIESSYGKDRSAALSRGSVNSEGPGF-RVPGNYVKGIACGGRHSAVITDAGALLTFGWGL 328
C +YG A RG V EG +V G+ +AC ++ G + +G
Sbjct: 212 CGNEAYGIQWEPAKVRGDV--EGSKIQKVSGSTDTLLAC--------SENGEIFIWGQTE 261
Query: 329 YGQCGQGSTDD-ELSPNC-VSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXX 386
YGQ G+TD+ +L+ + V++ LG I V + + +S G+V+
Sbjct: 262 YGQAA-GATDEIQLNTSRHVANSLG-PIICVDSTQSSVVARNSRGNVFVWGVGVLGMG-- 317
Query: 387 XXDQAETL--PRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVI 444
+AE+L P +D P + SVS G + I +DG++F WG N+Y LGLG
Sbjct: 318 --PEAESLKTPTQMDQPLFDGKMVTSVSAGNSCMSAINEDGRLFIWGENRYSSLGLGHQK 375
Query: 445 DRNIPSQVTIEGCVPRNVACGWWHTLLL 472
+ P Q+ + G V R A G H+L L
Sbjct: 376 RQLFPYQLFLPGDV-RKAALGPDHSLFL 402
>UNIPROTKB|B4DFC0 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 UniGene:Hs.32470 HGNC:HGNC:17499
EMBL:AC055860 EMBL:AC124058 EMBL:AC124078 EMBL:AK294022
IPI:IPI00977685 SMR:B4DFC0 STRING:B4DFC0 Ensembl:ENST00000532265
UCSC:uc010rcz.1 Uniprot:B4DFC0
Length = 174
Score = 125 (49.1 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 44/165 (26%), Positives = 71/165 (43%)
Query: 314 VITDAGALLTFGWGLYGQCGQGSTDDE-LSPNCVSSLLGIQIEGVAAGLWHTICISSDGD 372
++T+ G +L+ G +GQ G + P + L ++ +AAGL H + ++ G
Sbjct: 1 MLTENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIE-LHKEKVVCIAAGLRHAVAATASGI 59
Query: 373 VYAXXXXXXXXXXXXXDQAETLPRLLDA--PS----LENVHSKSVSCGARHTAVIADDGK 426
V+ +TLP A PS LEN + V G+ H+A + D G+
Sbjct: 60 VFQWGTGLASCGRRLCP-GQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGE 118
Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVAC---GWWH 468
V+ WG NK+GQL + +P ++ V GW H
Sbjct: 119 VYVWGSNKHGQLA-NEAAFLPVPQKIEAHCFQNEKVTAIWSGWTH 162
>FB|FBgn0030600 [details] [associations]
symbol:hiw "highwire" species:7227 "Drosophila melanogaster"
[GO:0008582 "regulation of synaptic growth at neuromuscular
junction" evidence=IMP;TAS] [GO:0016023 "cytoplasmic
membrane-bounded vesicle" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0007628 "adult walking behavior"
evidence=NAS] [GO:0040011 "locomotion" evidence=NAS] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0030514 "negative regulation
of BMP signaling pathway" evidence=IGI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0045886 "negative regulation of synaptic
growth at neuromuscular junction" evidence=IMP] [GO:0030509 "BMP
signaling pathway" evidence=IPI] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0006914 "autophagy" evidence=IDA]
[GO:0050808 "synapse organization" evidence=IDA] InterPro:IPR001841
InterPro:IPR027047 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415 Prosite:PS00518
GO:GO:0005886 GO:GO:0005634 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0046872 EMBL:AE014298 GO:GO:0008270 GO:GO:0006914
GO:GO:0040011 GO:GO:0050808 GO:GO:0006351 GO:GO:0016023
GO:GO:0045886 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0030509 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
GO:GO:0007628 eggNOG:COG5184 GO:GO:0030514 InterPro:IPR012983
Pfam:PF08005 InterPro:IPR017868 PROSITE:PS50194 EMBL:AF262977
EMBL:AY113376 RefSeq:NP_511159.3 UniGene:Dm.3259
ProteinModelPortal:Q9NB71 SMR:Q9NB71 IntAct:Q9NB71 STRING:Q9NB71
EnsemblMetazoa:FBtr0073970 GeneID:32429 KEGG:dme:Dmel_CG32592
UCSC:CG32592-RA CTD:32429 FlyBase:FBgn0030600
GeneTree:ENSGT00390000011403 InParanoid:Q9NB71 KO:K10693
OMA:DAQCQEY OrthoDB:EOG4ZPC91 PhylomeDB:Q9NB71 ChiTaRS:hiw
GenomeRNAi:32429 NextBio:778423 Bgee:Q9NB71 GermOnline:CG32592
PANTHER:PTHR12846 Uniprot:Q9NB71
Length = 5233
Score = 131 (51.2 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 34/83 (40%), Positives = 49/83 (59%)
Query: 395 PRLLD-APSLENVHSKS----VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIP 449
PR+ AP L + S S V+CG HT V+ G+V+ +G N+YGQLG GD+ + P
Sbjct: 950 PRVAPLAPQLLQLTSSSPVVQVACGLHHTVVLTLAGEVYTFGSNQYGQLGSGDLQPVSGP 1009
Query: 450 SQVTIEGCVPRNVACGWWHTLLL 472
+V + G + + VA G HT+LL
Sbjct: 1010 VRVQVPGAISQ-VAAGSNHTVLL 1031
Score = 123 (48.4 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 32/74 (43%), Positives = 43/74 (58%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG----VAAG 360
+ACG H+ V+T AG + TFG YGQ G G +L P VS + +Q+ G VAAG
Sbjct: 971 VACGLHHTVVLTLAGEVYTFGSNQYGQLGSG----DLQP--VSGPVRVQVPGAISQVAAG 1024
Query: 361 LWHTICISSDGDVY 374
HT+ ++S G VY
Sbjct: 1025 SNHTVLLTSKGMVY 1038
Score = 77 (32.2 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 97 EASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDL 137
E + K A G AHCVA+ G+++++G GR+F L
Sbjct: 749 EQHVTKVALGKAHCVALNAKGQLFSFGLNNKGQCGRIFNKL 789
Score = 66 (28.3 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 25/102 (24%), Positives = 45/102 (44%)
Query: 276 GKDRSAALSRGSVNSEGPG--FRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCG 333
G+D ++ +R + P ++ G+ V AC SA +T G L+ +G C
Sbjct: 681 GEDGDSSKNRRQPKAVKPKKMTKIDGHVVVHAACNNGTSAFVTKTGKLIMYGKDT-AHC- 738
Query: 334 QGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYA 375
D + VS LL + VA G H + +++ G +++
Sbjct: 739 -----DAMG--FVSELLEQHVTKVALGKAHCVALNAKGQLFS 773
Score = 37 (18.1 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 435 YGQLGLG-----DVIDRNIPSQVTIEGCVPRN 461
Y GLG + DR + S+++ E C P N
Sbjct: 3834 YEMFGLGPNSNDNGYDRPL-SEISYESCEPNN 3864
>DICTYBASE|DDB_G0280093 [details] [associations]
symbol:gacGG "RhoGAP domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0007165 "signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0043547 "positive regulation of GTPase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005096
"GTPase activator activity" evidence=IEA] InterPro:IPR000198
InterPro:IPR008936 Pfam:PF00620 PROSITE:PS50238 SMART:SM00324
dictyBase:DDB_G0280093 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0007165 GO:GO:0005096 GO:GO:0043547
Gene3D:1.10.555.10 SUPFAM:SSF48350 GenomeReviews:CM000152_GR
EMBL:AAFI02000035 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 HSSP:Q07960 RefSeq:XP_641238.1
ProteinModelPortal:Q54VW7 EnsemblProtists:DDB0233849 GeneID:8622369
KEGG:ddi:DDB_G0280093 InParanoid:Q54VW7 OMA:INSIVEC Uniprot:Q54VW7
Length = 1203
Score = 133 (51.9 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 43/145 (29%), Positives = 65/145 (44%)
Query: 297 VPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG 356
+P VK I+CGG SA I + G L + WG + G+ T+ SP V L G+
Sbjct: 84 IPNQRVKSISCGGNFSAAIMENGLL--YVWGTLIEGGK-CTE---SPTKVDLLKGVTC-- 135
Query: 357 VAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETL-PRLLDAPSLENVHSKSVS--C 413
V+ G+ H ++ D Q + + +AP + SK++S C
Sbjct: 136 VSIGINHCAVVA-DSPTTPEKRSVYTWGTNRKGQLGVVGDSITNAPRRVTLGSKAISVCC 194
Query: 414 GARHTAVIADDGKVFCWGWNKYGQL 438
G TA I + +VF WG+NK Q+
Sbjct: 195 GEEFTAAIVEGNEVFVWGYNKSRQI 219
Score = 61 (26.5 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 10/18 (55%), Positives = 14/18 (77%)
Query: 106 GWAHCVAVTEGGEVYTWG 123
G+ H +A+TE GE+Y WG
Sbjct: 42 GYNHSLALTETGELYGWG 59
>FB|FBgn0031769 [details] [associations]
symbol:CG9135 species:7227 "Drosophila melanogaster"
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
[GO:0005875 "microtubule associated complex" evidence=IDA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005875 EMBL:AE014134
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104160 OMA:FGENKLG EMBL:AY058682
EMBL:AM294309 EMBL:AM294310 EMBL:AM294311 EMBL:AM294312
EMBL:AM294313 EMBL:AM294314 EMBL:AM294315 EMBL:AM294316
EMBL:AM294317 EMBL:AM294318 EMBL:FM245376 EMBL:FM245377
EMBL:FM245378 EMBL:FM245379 EMBL:FM245380 EMBL:FM245381
EMBL:FM245382 EMBL:FM245383 EMBL:FM245384 EMBL:FM245385
EMBL:FM245386 EMBL:FM245387 RefSeq:NP_608985.1 RefSeq:NP_723150.1
UniGene:Dm.4234 HSSP:P18754 SMR:Q9VMI5 IntAct:Q9VMI5
MINT:MINT-744911 STRING:Q9VMI5 EnsemblMetazoa:FBtr0079185
EnsemblMetazoa:FBtr0079186 GeneID:33850 KEGG:dme:Dmel_CG9135
UCSC:CG9135-RA FlyBase:FBgn0031769 InParanoid:Q9VMI5
OrthoDB:EOG4QV9T7 ChiTaRS:CG9135 GenomeRNAi:33850 NextBio:785598
Uniprot:Q9VMI5
Length = 487
Score = 112 (44.5 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 43/190 (22%), Positives = 79/190 (41%)
Query: 289 NSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS 348
+ EG V G + ACG H+ I + ++G+G +G+ G DE+ P +
Sbjct: 286 SKEGHVTPVDGVQIVDFACGNNHTVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMK- 344
Query: 349 LLGIQIEG---VAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLEN 405
Q G V G ++ ++ G ++ +A P+ + S N
Sbjct: 345 FFDTQGRGGRSVFCGSTFSLIVNELGLLFLFGQNKKTG------EANMYPKPVQDLSGWN 398
Query: 406 VHSKSVSCGARHTAVIADDGKVFCWGWNK-YGQLGLGDVIDRN-IPSQVT-IEGCVPRNV 462
+ + C + ADD + WG + +G+LG+G+ + +P +V ++ V
Sbjct: 399 I--TDIGCANTSIMISADD-TLIAWGASPTFGELGIGEFQKSSTVPKEVPKLDNIKIPQV 455
Query: 463 ACGWWHTLLL 472
G+ HT+LL
Sbjct: 456 TMGYSHTVLL 465
Score = 88 (36.0 bits), Expect = 0.00031, Sum P(3) = 0.00031
Identities = 32/132 (24%), Positives = 56/132 (42%)
Query: 295 FRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQI 354
F G + + CG S ++ + G L FG + G+ + + P V L G I
Sbjct: 346 FDTQGRGGRSVFCGSTFSLIVNELGLLFLFGQNK--KTGEAN----MYPKPVQDLSGWNI 399
Query: 355 EGVAAGLWHT-ICISSDGDVYAXXXXXXXXXXXXXD--QAETLPRLLDAPSLENVHSKSV 411
+ G +T I IS+D + A + ++ T+P+ + P L+N+ V
Sbjct: 400 TDI--GCANTSIMISADDTLIAWGASPTFGELGIGEFQKSSTVPK--EVPKLDNIKIPQV 455
Query: 412 SCGARHTAVIAD 423
+ G HT ++ D
Sbjct: 456 TMGYSHTVLLVD 467
Score = 70 (29.7 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 24/80 (30%), Positives = 37/80 (46%)
Query: 46 WRDVCGG-GCGFAMAISDSRKLITWGSTDDLGQSYVTSG-KHGEIPEPFPLPTEASIVKA 103
+R V G + I+ RK + +G GQ ++ K E P P + +IV+A
Sbjct: 116 YRYVASGPSAAHTILINMDRKALGFGRNPS-GQLGLSQDIKLAEKPTIIPALEQLNIVQA 174
Query: 104 AAGWAHCVAVTEGGEVYTWG 123
A G H + +T+ G VY G
Sbjct: 175 AVGRHHTLFLTDTGTVYACG 194
Score = 54 (24.1 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 24/96 (25%), Positives = 36/96 (37%)
Query: 203 SGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIXXXXXXXXXXXXXXXXXSRIRMV 262
S D L+ P ++ + I A G HTL L+D + +
Sbjct: 151 SQDIKLAEKPTIIPALEQLNIVQAAVGRHHTLFLTDTGTVYACGENKSGQCGVGNTHANI 210
Query: 263 SSPHPI-----PCIESSYGKDRSAALS-RGSVNSEG 292
SP PI P I G + S L +GS+++ G
Sbjct: 211 YSPTPINYRGPPIIRIGCGAEFSVILDIKGSLHTFG 246
Score = 45 (20.9 bits), Expect = 0.00031, Sum P(3) = 0.00031
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 215 VTLNPGVRIATVAAGGRHTLAL 236
VT GV+I A G HT+A+
Sbjct: 291 VTPVDGVQIVDFACGNNHTVAI 312
>UNIPROTKB|F1NXI5 [details] [associations]
symbol:SERGEF "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA] [GO:0050709 "negative regulation of
protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005730 GO:GO:0045111
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
GeneTree:ENSGT00700000104160 PANTHER:PTHR22870:SF7
EMBL:AADN02030419 EMBL:AADN02030421 EMBL:AADN02030420
IPI:IPI00682810 Ensembl:ENSGALT00000010072 OMA:PIELDIT
Uniprot:F1NXI5
Length = 382
Score = 134 (52.2 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 42/131 (32%), Positives = 57/131 (43%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
+K IA GG HSAVIT AG L G GQ G T+D L ++L G ++ VA G
Sbjct: 32 IKSIAGGGGHSAVITGAGELFVCGHNKAGQLGLNHTEDVLCFTLCTALSGFCVQEVACGW 91
Query: 362 WHTICISSDGDVYAXXXXXXXXXXXXXDQAETL-PRLLDAPSLENVHSKSVSCGARHTAV 420
TI + G V + L P+ + SL+ + ++ G RH
Sbjct: 92 DFTIILGRAGLVLSCGSNAFGQLGVPQISGPCLIPQKIK--SLKE-KAVGIAAGLRHALA 148
Query: 421 IADDGKVFCWG 431
+ G VF WG
Sbjct: 149 ATESGLVFQWG 159
Score = 120 (47.3 bits), Expect = 0.00023, P = 0.00023
Identities = 31/80 (38%), Positives = 44/80 (55%)
Query: 394 LPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT 453
+P+LL S + KS++ G H+AVI G++F G NK GQLGL D + T
Sbjct: 18 VPQLLKDVSCKCQDIKSIAGGGGHSAVITGAGELFVCGHNKAGQLGLNHTEDVLCFTLCT 77
Query: 454 -IEGCVPRNVACGWWHTLLL 472
+ G + VACGW T++L
Sbjct: 78 ALSGFCVQEVACGWDFTIIL 97
Score = 118 (46.6 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 42/148 (28%), Positives = 64/148 (43%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE-LSPNCVSSLLGIQIEGV 357
G V+ +ACG + ++ AG +L+ G +GQ G L P + SL + G+
Sbjct: 81 GFCVQEVACGWDFTIILGRAGLVLSCGSNAFGQLGVPQISGPCLIPQKIKSLKEKAV-GI 139
Query: 358 AAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSK------SV 411
AAGL H + + G V+ Q +TLP A + V
Sbjct: 140 AAGLRHALAATESGLVFQWGTGMASRAKRVH-QGKTLPVFWAAKEPCEIKGNPGVLLCQV 198
Query: 412 SCGARHTAV-IADDGKVFCWGWNKYGQL 438
S A T++ A +G ++ WG NK+GQL
Sbjct: 199 SLSAYLTSLSTAGEGHLYVWGSNKHGQL 226
Score = 95 (38.5 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 19/63 (30%), Positives = 31/63 (49%)
Query: 411 VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRN-VACGWWHT 469
++CG+ H + D WGWN++G G G + ++P V G + + CG H+
Sbjct: 319 IACGSEHNLAVVGDC-CLSWGWNEHGMCGDGTEANVHVPKPVKALGYAKQILIGCGAGHS 377
Query: 470 LLL 472
L L
Sbjct: 378 LAL 380
Score = 95 (38.5 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 43/180 (23%), Positives = 68/180 (37%)
Query: 304 GIACGGRHSAVITDAGALLTFGWGLYGQCG---QGSTDDEL----SPNCVSSLLGIQIEG 356
GIA G RH+ T++G + +G G+ + QG T P + G+ +
Sbjct: 138 GIAAGLRHALAATESGLVFQWGTGMASRAKRVHQGKTLPVFWAAKEPCEIKGNPGVLLCQ 197
Query: 357 VAAGLWHT-ICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGA 415
V+ + T + + +G +Y + P+ +D + +V G
Sbjct: 198 VSLSAYLTSLSTAGEGHLYVWGSNKHGQLVSK-EVFLVEPKKIDTQFFSHEKIGAVWSGW 256
Query: 416 RHTAVIADDGKVFCWGWNKYGQLGLGDVI---DRNIPSQVTIEGCVPRNVACGWWHTLLL 472
H + GKVF WG YGQLG + DR I + C HT+LL
Sbjct: 257 THLVAQTETGKVFTWGRADYGQLGRHAAVYVADRVIKLDSFLPCCPQPEAEKNGNHTILL 316
Score = 85 (35.0 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 29/74 (39%), Positives = 36/74 (48%)
Query: 71 STDDLGQSYVT-SGKHGEIP-------EPFPLPTEA-SIVKAAA---GWAHCVAVTEGGE 118
ST G YV S KHG++ EP + T+ S K A GW H VA TE G+
Sbjct: 208 STAGEGHLYVWGSNKHGQLVSKEVFLVEPKKIDTQFFSHEKIGAVWSGWTHLVAQTETGK 267
Query: 119 VYTWGWKECVPSGR 132
V+TWG + GR
Sbjct: 268 VFTWGRADYGQLGR 281
Score = 83 (34.3 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 22/65 (33%), Positives = 34/65 (52%)
Query: 305 IACGGRHS-AVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSL-LGIQIEGVAAGLW 362
IACG H+ AV+ D L++GW +G CG G+ + P V +L QI + G
Sbjct: 319 IACGSEHNLAVVGDC--CLSWGWNEHGMCGDGTEANVHVPKPVKALGYAKQIL-IGCGAG 375
Query: 363 HTICI 367
H++ +
Sbjct: 376 HSLAL 380
Score = 63 (27.2 bits), Expect = 0.00050, Sum P(3) = 0.00050
Identities = 24/74 (32%), Positives = 35/74 (47%)
Query: 54 CG--FAMAISDSRKLITWGST--DDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAH 109
CG F + + + +++ GS LG + SG IP+ E + V AAG H
Sbjct: 89 CGWDFTIILGRAGLVLSCGSNAFGQLGVPQI-SGPC-LIPQKIKSLKEKA-VGIAAGLRH 145
Query: 110 CVAVTEGGEVYTWG 123
+A TE G V+ WG
Sbjct: 146 ALAATESGLVFQWG 159
Score = 41 (19.5 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 100 IVKAAAGWAHCVAVTEGGEVYTWG 123
I A G H +T GE++ G
Sbjct: 32 IKSIAGGGGHSAVITGAGELFVCG 55
Score = 38 (18.4 bits), Expect = 0.00050, Sum P(3) = 0.00050
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 212 PCLVTLNPGVRIATVA 227
PC + NPGV + V+
Sbjct: 184 PCEIKGNPGVLLCQVS 199
>MGI|MGI:1918677 [details] [associations]
symbol:Ibtk "inhibitor of Bruton agammaglobulinemia tyrosine
kinase" species:10090 "Mus musculus" [GO:0001933 "negative
regulation of protein phosphorylation" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0016020 "membrane" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0030292
"protein tyrosine kinase inhibitor activity" evidence=ISO]
[GO:0051209 "release of sequestered calcium ion into cytosol"
evidence=ISO] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISO] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 MGI:MGI:1918677
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0016020 GO:GO:0051209 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 EMBL:CH466522
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0030292 CTD:25998 HOVERGEN:HBG081779 OMA:VSALHHK
OrthoDB:EOG4J6RQ1 ChiTaRS:IBTK EMBL:BC137798 EMBL:AK030895
EMBL:AK077387 EMBL:AK129353 IPI:IPI00660767 IPI:IPI00750982
RefSeq:NP_001074751.1 UniGene:Mm.22315 UniGene:Mm.487092
ProteinModelPortal:Q6ZPR6 SMR:Q6ZPR6 PhosphoSite:Q6ZPR6
PaxDb:Q6ZPR6 PRIDE:Q6ZPR6 Ensembl:ENSMUST00000039213 GeneID:108837
KEGG:mmu:108837 GeneTree:ENSGT00700000104160 HOGENOM:HOG000090207
InParanoid:Q6ZPR6 NextBio:361375 Bgee:Q6ZPR6 Genevestigator:Q6ZPR6
Uniprot:Q6ZPR6
Length = 1352
Score = 142 (55.0 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 58/196 (29%), Positives = 81/196 (41%)
Query: 274 SYGKDRSAALSRGSVNSEG-PG----FRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL 328
++G + + L GS NS+ P F G YVK + HS ++ G + T G G
Sbjct: 146 TWGDNTNFTLGHGSQNSKHHPELLDLFSRSGVYVKQVVLCKFHSVFLSQKGQVYTCGHGR 205
Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXX 388
G+ G G L P V L G VAA HT+ ++ DG VY
Sbjct: 206 GGRLGHGDEQTCLVPRLVEGLSGHNCSQVAAAKDHTVVLTDDGCVYTFGLNMFHQLGIIP 265
Query: 389 DQAE-TLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
A +PR + A L+ V+ G HT + + V+ G N GQLG ++D N
Sbjct: 266 PPASCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWTREA-VYTLGLNG-GQLG--HLLDPN 321
Query: 448 IPSQVTIEGCVPRNVA 463
VT PR V+
Sbjct: 322 GEKCVT----TPRQVS 333
>ZFIN|ZDB-GENE-080929-1 [details] [associations]
symbol:als2b "amyotrophic lateral sclerosis 2b
(juvenile)" species:7955 "Danio rerio" [GO:0035023 "regulation of
Rho protein signal transduction" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005089 "Rho guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005543 "phospholipid
binding" evidence=IEA] InterPro:IPR000219 InterPro:IPR001849
Pfam:PF00621 PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408
Pfam:PF00415 Pfam:PF02204 ZFIN:ZDB-GENE-080929-1 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 KO:K04575 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 EMBL:CU570787 EMBL:BX927225
EMBL:CU915284 IPI:IPI01024580 RefSeq:XP_002662342.2
UniGene:Dr.158633 Ensembl:ENSDART00000149896 GeneID:100318899
KEGG:dre:100318899 CTD:100318899 Uniprot:F8W4K3
Length = 1681
Score = 109 (43.4 bits), Expect = 7.7e-06, Sum P(4) = 7.7e-06
Identities = 27/101 (26%), Positives = 47/101 (46%)
Query: 323 TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXX 382
++G G GQ G G L P+CV SL G ++ VAAG H++ +++ V++
Sbjct: 553 SWGQGQDGQLGHGDLLPRLQPDCVKSLNGKEVLKVAAGAHHSLALTAQSQVFSWGCNTSG 612
Query: 383 XXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
+ T P+L + + + G +HT ++AD
Sbjct: 613 QLGHM-ESPTTFPQLTKLS--DGIRVWDIGAGLQHTLLLAD 650
Score = 94 (38.1 bits), Expect = 0.00028, Sum P(4) = 0.00028
Identities = 28/85 (32%), Positives = 38/85 (44%)
Query: 392 ETLPRLLD--APSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIP 449
+ LPRL SL V+ GA H+ + +VF WG N GQLG + P
Sbjct: 566 DLLPRLQPDCVKSLNGKEVLKVAAGAHHSLALTAQSQVFSWGCNTSGQLGHMES-PTTFP 624
Query: 450 SQVTI-EGCVPRNVACGWWHTLLLA 473
+ +G ++ G HTLLLA
Sbjct: 625 QLTKLSDGIRVWDIGAGLQHTLLLA 649
Score = 73 (30.8 bits), Expect = 7.7e-06, Sum P(4) = 7.7e-06
Identities = 23/69 (33%), Positives = 35/69 (50%)
Query: 65 KLITWGSTDDLGQS---YVTSG-KHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVY 120
KLI+ G D G+ + G + PE L +++AA G H V + EGG+VY
Sbjct: 3 KLISSGEGDSSGERGLLHTWKGYSYSTAPERVLL--SRPVLQAALGARHGVLLVEGGQVY 60
Query: 121 TWG---WKE 126
++G WK+
Sbjct: 61 SFGELPWKQ 69
Score = 66 (28.3 bits), Expect = 3.6e-05, Sum P(4) = 3.6e-05
Identities = 14/28 (50%), Positives = 17/28 (60%)
Query: 96 TEASIVKAAAGWAHCVAVTEGGEVYTWG 123
+E +V AAG AH VTE G V+ WG
Sbjct: 84 SEQRVVFVAAGSAHSGVVTEDGGVHMWG 111
Score = 51 (23.0 bits), Expect = 7.7e-06, Sum P(4) = 7.7e-06
Identities = 11/17 (64%), Positives = 13/17 (76%)
Query: 221 VRIATVAAGGRHTLALS 237
V+I VA G +HTLALS
Sbjct: 145 VKILEVACGDQHTLALS 161
Score = 43 (20.2 bits), Expect = 7.7e-06, Sum P(4) = 7.7e-06
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 299 GNYVKGIACGGRHSAVI 315
G +V +ACG HS +
Sbjct: 195 GRHVLQVACGSAHSVAL 211
Score = 40 (19.1 bits), Expect = 1.5e-05, Sum P(4) = 1.5e-05
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 263 SSP-HPIPCIESSYGKDRSAALSRGSVNSEGPGFRVP 298
SSP P+PC+ + K S S S ++ P +P
Sbjct: 281 SSPTEPVPCMSTQISK--SPTSSNISESTRPPESTLP 315
Score = 39 (18.8 bits), Expect = 0.00011, Sum P(4) = 0.00011
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 205 DENLSAFPCLVTLNPGVRIATVAAGGRHT 233
++ SA P L + R+ VAAG H+
Sbjct: 70 NQTSSAEPILEAVLSEQRVVFVAAGSAHS 98
>DICTYBASE|DDB_G0282633 [details] [associations]
symbol:DDB_G0282633 "putative guanine nucleotide
exchange factor (GEF)" species:44689 "Dictyostelium discoideum"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 dictyBase:DDB_G0282633
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AAFI02000047 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
RefSeq:XP_640165.2 ProteinModelPortal:Q54S74
EnsemblProtists:DDB0234270 GeneID:8623703 KEGG:ddi:DDB_G0282633
OMA:RLAYLCN ProtClustDB:CLSZ2501699 Uniprot:Q54S74
Length = 919
Score = 137 (53.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 40/173 (23%), Positives = 79/173 (45%)
Query: 308 GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI 367
G ++ ++TD GA+ + G YG+ G D L P + L +I+ +A G H++ +
Sbjct: 202 GQNYNLILTDTGAVYSSGLCSYGKTGHKKKRDVLIPTQILELSNKRIKSIACGTHHSLAM 261
Query: 368 SSDGDVYAXXXXXXXXXXXXXD-QAETLPRLLDAPSL--ENVHSKSVSCGARHTAVIADD 424
G VY+ D P L+ + N + +++ G ++ ++ +
Sbjct: 262 DDLGQVYSWGNGASGRLGLGNDFSIVPTPTLISVINRFGSNEIATAIAAGCDNSMILGSN 321
Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVP-----RNVACGWWHTLLL 472
G V+ +G N + +LG + D + Q T + +P +++AC WH++ L
Sbjct: 322 GDVYSFGSNLHYKLGYKEC-DGALGFQSTPKK-IPSILQMKSIACASWHSVFL 372
Score = 131 (51.2 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 50/192 (26%), Positives = 90/192 (46%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL-SPNCVSSL--LGIQ--IEG 356
+K IACG HS + D G + ++G G G+ G G+ + +P +S + G
Sbjct: 248 IKSIACGTHHSLAMDDLGQVYSWGNGASGRLGLGNDFSIVPTPTLISVINRFGSNEIATA 307
Query: 357 VAAGLWHTICISSDGDVYAXXXXXXXXXXXXX-DQA---ETLPRLLDAPSLENVHSKSVS 412
+AAG +++ + S+GDVY+ D A ++ P+ + PS+ + KS++
Sbjct: 308 IAAGCDNSMILGSNGDVYSFGSNLHYKLGYKECDGALGFQSTPKKI--PSI--LQMKSIA 363
Query: 413 CGARHTAVIADDGKVFCWGWNKYGQLGLG-DVIDRNIPSQVTI-----EGCVP-----RN 461
C + H+ + G+V+ G + G+LG P +V+I G +P +
Sbjct: 364 CASWHSVFLDLKGRVYTCGSSTNGRLGRAISSYSSFYPERVSITNSKTNGTLPQEEVIKQ 423
Query: 462 VACGWWHTLLLA 473
+ACG T +L+
Sbjct: 424 IACGTNFTTVLS 435
Score = 122 (48.0 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 48/186 (25%), Positives = 82/186 (44%)
Query: 286 GSVNSEGPGFRVPGNY-VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDELSP 343
G++ + ++P +K IAC HS + G + T G G+ G+ S+ P
Sbjct: 342 GALGFQSTPKKIPSILQMKSIACASWHSVFLDLKGRVYTCGSSTNGRLGRAISSYSSFYP 401
Query: 344 NCVS-------SLLGIQ--IEGVAAGLWHTICISSDGDVYA----XXXXXXXXXXXXXDQ 390
VS L + I+ +A G T +S G +Y+ +
Sbjct: 402 ERVSITNSKTNGTLPQEEVIKQIACGTNFTTVLSESGSLYSWGVNTKSQLGLINLVGISE 461
Query: 391 AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIP- 449
+ P+L+ A + +HS +V G +H ++D G+VFC+G N Q G G+V++ I
Sbjct: 462 YYSQPKLVTALNPYTIHSFAV--GDQHVVALSDQGEVFCYGDNSTLQCGFGEVLNFEINL 519
Query: 450 SQVTIE 455
++V IE
Sbjct: 520 TKVKIE 525
Score = 121 (47.7 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 35/152 (23%), Positives = 66/152 (43%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL----SPNCVSSLLGIQIEGVAAG 360
IA G +S ++ G + +FG L+ + G D L +P + S+L Q++ +A
Sbjct: 308 IAAGCDNSMILGSNGDVYSFGSNLHYKLGYKECDGALGFQSTPKKIPSIL--QMKSIACA 365
Query: 361 LWHTICISSDGDVYAXXXXXXXXXXXXXDQAETL-PRLLDAPSLENVHS-------KSVS 412
WH++ + G VY + P + + + + K ++
Sbjct: 366 SWHSVFLDLKGRVYTCGSSTNGRLGRAISSYSSFYPERVSITNSKTNGTLPQEEVIKQIA 425
Query: 413 CGARHTAVIADDGKVFCWGWNKYGQLGLGDVI 444
CG T V+++ G ++ WG N QLGL +++
Sbjct: 426 CGTNFTTVLSESGSLYSWGVNTKSQLGLINLV 457
Score = 55 (24.4 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 16/69 (23%), Positives = 28/69 (40%)
Query: 222 RIATVAAGGRHTLALSDIXXXXXXXXXXXXXXXXXSRIRMVSSPHPIPCIESSYGKDRSA 281
RI ++A G H+LA+ D+ + +V +P I I + +
Sbjct: 247 RIKSIACGTHHSLAMDDLGQVYSWGNGASGRLGLGNDFSIVPTPTLISVINRFGSNEIAT 306
Query: 282 ALSRGSVNS 290
A++ G NS
Sbjct: 307 AIAAGCDNS 315
Score = 54 (24.1 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 100 IVKAAAGWAHCVAVTEGGEVYTWG 123
I A G H +A+ + G+VY+WG
Sbjct: 248 IKSIACGTHHSLAMDDLGQVYSWG 271
Score = 45 (20.9 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 21/68 (30%), Positives = 31/68 (45%)
Query: 73 DDLGQSYV----TSGKHGEIPEPF---PLPTEASIVKA----------AAGWAHCVAVTE 115
DDLGQ Y SG+ G + F P PT S++ AAG + + +
Sbjct: 262 DDLGQVYSWGNGASGRLG-LGNDFSIVPTPTLISVINRFGSNEIATAIAAGCDNSMILGS 320
Query: 116 GGEVYTWG 123
G+VY++G
Sbjct: 321 NGDVYSFG 328
>DICTYBASE|DDB_G0282575 [details] [associations]
symbol:DDB_G0282575 "putative GTPase activating
protein (GAP)" species:44689 "Dictyostelium discoideum" [GO:0032851
"positive regulation of Rab GTPase activity" evidence=IEA]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005097 "Rab GTPase
activator activity" evidence=IEA] InterPro:IPR000195 Pfam:PF00566
PROSITE:PS50086 SMART:SM00164 dictyBase:DDB_G0282575
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AAFI02000047 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5210
GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923 RefSeq:XP_640136.1
ProteinModelPortal:Q54SA3 EnsemblProtists:DDB0235329 GeneID:8623673
KEGG:ddi:DDB_G0282575 InParanoid:Q54SA3 OMA:NIVFRIW Uniprot:Q54SA3
Length = 1194
Score = 99 (39.9 bits), Expect = 2.8e-05, Sum P(3) = 2.8e-05
Identities = 25/78 (32%), Positives = 41/78 (52%)
Query: 300 NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCG---QGSTDDELS----PNCVSSLLGI 352
N +K I+ G H+ ++ + G L+ G G +GQ G S+ D+ S P + +LL
Sbjct: 564 NRIKQISSGYSHTLILNENGECLSIGQGEFGQLGIPLDHSSIDKDSFVNYPTVIPALLPY 623
Query: 353 QIEGVAAGLWHTICISSD 370
+E V G WH++ I S+
Sbjct: 624 FVESVQCGRWHSVAIVSN 641
Score = 89 (36.4 bits), Expect = 0.00032, Sum P(3) = 0.00032
Identities = 37/167 (22%), Positives = 69/167 (41%)
Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXX 380
+L+FG G ++EL + I+I ++ G H + +S VY+
Sbjct: 339 VLSFGGSNDNNFLGGVINNELQM-MTDQMNSIKIIQISCGSNHILALSDQYHVYSWGSAE 397
Query: 381 XXXXXXXXDQA--ETLPRLLDAPS-LENVHSK-----SVSCGARHTAVIADDGKVFCWGW 432
D + PR +++P ++++ K SVS G H + D + WG
Sbjct: 398 HGKLGHGEDYSFVSQNPRWINSPKKIKSLQEKGVTVISVSSGYSHCMALTLDSGILTWGK 457
Query: 433 NKYGQLGLGDVIDRNIPSQVTIEGCVPRN-----VACGWWHTLLLAV 474
GQLG G +I S I+ + +N + CG++++ + +
Sbjct: 458 GSDGQLGTG--FRHDIWSPFEIKRVIDKNEKIVQICCGYFNSFFITL 502
Score = 83 (34.3 bits), Expect = 1.3e-05, Sum P(4) = 1.3e-05
Identities = 20/72 (27%), Positives = 37/72 (51%)
Query: 409 KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG---DVIDRN--IPSQVTIEGCVP---R 460
K +S G HT ++ ++G+ G ++GQLG+ ID++ + I +P
Sbjct: 567 KQISSGYSHTLILNENGECLSIGQGEFGQLGIPLDHSSIDKDSFVNYPTVIPALLPYFVE 626
Query: 461 NVACGWWHTLLL 472
+V CG WH++ +
Sbjct: 627 SVQCGRWHSVAI 638
Score = 81 (33.6 bits), Expect = 1.3e-05, Sum P(4) = 1.3e-05
Identities = 32/128 (25%), Positives = 55/128 (42%)
Query: 4 EGQEEKMERVVFMWGYLPGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDS 63
+ ++ + + +F WG G I+ P+ V L + + CG + +SDS
Sbjct: 2 DDEDYRNSKQIFYWGR--GVNQGDKHIIEPIEVP-ELNKKNIVQLSCGST--HTLVLSDS 56
Query: 64 RKLITWGSTDDLGQ-----SYVTSGKHGEIPEPFPLPTEAS---IVKAAAGWAHCVAVTE 115
L +WGS++ GQ S GK I + F L S +++ + G +T+
Sbjct: 57 GDLYSWGSSNSSGQLGHGDSKNQYGKPKNIKK-FSLIKALSGDSVIQVSTGLDFTFVLTD 115
Query: 116 GGEVYTWG 123
G +Y WG
Sbjct: 116 QGSIYNWG 123
Score = 80 (33.2 bits), Expect = 1.6e-05, Sum P(4) = 1.6e-05
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 62 DSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLP--TEASIVKAAAGWAHCVAVTEGGEV 119
+S+++ WG + G KH I EP +P + +IV+ + G H + +++ G++
Sbjct: 8 NSKQIFYWGRGVNQGD------KH--IIEPIEVPELNKKNIVQLSCGSTHTLVLSDSGDL 59
Query: 120 YTWGWKECVPSGRV-FGDLSTGTGLDKDV 147
Y+WG SG++ GD G K++
Sbjct: 60 YSWGSSNS--SGQLGHGDSKNQYGKPKNI 86
Score = 65 (27.9 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 25/112 (22%), Positives = 47/112 (41%)
Query: 274 SYGKDRSAALSRGSVNSEGPGFRVPGNYVK--GIACGGRHSAVITDAGALLTFGWGLYGQ 331
S+G G +N+E N +K I+CG H ++D + ++G +G+
Sbjct: 341 SFGGSNDNNFLGGVINNELQMMTDQMNSIKIIQISCGSNHILALSDQYHVYSWGSAEHGK 400
Query: 332 CGQGSTDDELS--------PNCVSSLL--GIQIEGVAAGLWHTICISSDGDV 373
G G +S P + SL G+ + V++G H + ++ D +
Sbjct: 401 LGHGEDYSFVSQNPRWINSPKKIKSLQEKGVTVISVSSGYSHCMALTLDSGI 452
Score = 60 (26.2 bits), Expect = 1.3e-05, Sum P(4) = 1.3e-05
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 299 GNYVKGIACGGRHSAVIT-DAGALLTFGWGLYGQCGQGSTDDELSP 343
G V ++ G H +T D+G +LT+G G GQ G G D SP
Sbjct: 430 GVTVISVSSGYSHCMALTLDSG-ILTWGKGSDGQLGTGFRHDIWSP 474
Score = 47 (21.6 bits), Expect = 0.00032, Sum P(3) = 0.00032
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG 335
G+ V ++ G + V+TD G++ +G + GQ G
Sbjct: 97 GDSVIQVSTGLDFTFVLTDQGSIYNWGSNIEGQLALG 133
Score = 46 (21.3 bits), Expect = 1.3e-05, Sum P(4) = 1.3e-05
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 221 VRIATVAAGGRHTLALSD 238
++I ++ G H LALSD
Sbjct: 369 IKIIQISCGSNHILALSD 386
>UNIPROTKB|F1MMV0 [details] [associations]
symbol:IBTK "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051209 "release of sequestered calcium ion into
cytosol" evidence=IEA] [GO:0030292 "protein tyrosine kinase
inhibitor activity" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0051209
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS50012 GO:GO:0030292 OMA:VSALHHK
GeneTree:ENSGT00700000104160 EMBL:DAAA02025482 EMBL:DAAA02025483
IPI:IPI00708608 Ensembl:ENSBTAT00000038116 Uniprot:F1MMV0
Length = 1353
Score = 138 (53.6 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 56/196 (28%), Positives = 81/196 (41%)
Query: 274 SYGKDRSAALSRGSVNSEG-PG----FRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL 328
++G + + L GS NS+ P F G Y+K + HS ++ G + T G G
Sbjct: 146 TWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGP 205
Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXX 388
G+ G G L P V L G VAA HT+ ++ DG VY
Sbjct: 206 GGRLGHGDEQTCLVPRLVEGLSGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQLGLIP 265
Query: 389 DQAE-TLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
+ +PR + A L+ V+ G HT + + V+ G N GQLG ++D N
Sbjct: 266 PPSSCNVPRQMQAKYLKGRTIIGVAAGRFHTVLWTREA-VYTMGLNG-GQLGY--LLDPN 321
Query: 448 IPSQVTIEGCVPRNVA 463
VT PR V+
Sbjct: 322 GEKCVT----APRQVS 333
>UNIPROTKB|Q83CB0 [details] [associations]
symbol:CBU_1217 "Hypothetical membrane spanning protein"
species:227377 "Coxiella burnetii RSA 493" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE016828
GenomeReviews:AE016828_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 OMA:GYIYAWG
RefSeq:NP_820212.1 ProteinModelPortal:Q83CB0 GeneID:1209121
KEGG:cbu:CBU_1217 PATRIC:17931169 HOGENOM:HOG000029001
ProtClustDB:CLSK914618 BioCyc:CBUR227377:GJ7S-1203-MONOMER
Uniprot:Q83CB0
Length = 497
Score = 126 (49.4 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 42/152 (27%), Positives = 62/152 (40%)
Query: 310 RHSAVITDAGALLTFGWGLYGQCGQG-----STDDELSPNCVSSLL--GIQIEGVAAGLW 362
RH+ ++T+ G + +G+ + G+ G G S EL N LL G +I +
Sbjct: 188 RHAFILTEEGGIYGWGFNISGELGLGDRFERSQPTELPQNFFPYLLERGDRIVQLNFADR 247
Query: 363 HTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKS----VSCGARHT 418
+ + ++ G VY +Q P L H V G RHT
Sbjct: 248 YLVARTAQGHVYVWGFNYRGRLGLDDEQDRLHPVELSWDFFPEWHPDDYIIQVVVGDRHT 307
Query: 419 AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
+ G ++ WG N YGQLG D DRN P+
Sbjct: 308 LALTQLGYIYAWGKNSYGQLGFRDQQDRNRPA 339
Score = 122 (48.0 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 44/158 (27%), Positives = 61/158 (38%)
Query: 298 PGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSP-----NCVSSLLGI 352
P +Y+ + G RH+ +T G + +G YGQ G D P N LL
Sbjct: 293 PDDYIIQVVVGDRHTLALTQLGYIYAWGKNSYGQLGFRDQQDRNRPALLPWNRFPGLLER 352
Query: 353 Q---IEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDA---PSLENV 406
IE +A G ++ + G +Y + P LL P L
Sbjct: 353 NDRIIELIAGGA-RSLARTEQGFIYIWGARWLLVRGD--PEFRHHPMLLTENYFPGLRRR 409
Query: 407 --HSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGD 442
H + G HT + G ++ WG N YGQLGLGD
Sbjct: 410 GDHLVELIAGPDHTLARTEQGYIYAWGRNYYGQLGLGD 447
Score = 54 (24.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 99 SIVKAAAGWAHCVAVTEGGEVYTWGW 124
+IV+ + + H +TE G +Y WG+
Sbjct: 179 TIVQLLSDYRHAFILTEEGGIYGWGF 204
Score = 51 (23.0 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 21/75 (28%), Positives = 34/75 (45%)
Query: 57 AMAISDSRKLITWG---STD-DLGQSYVTSGKHGEIPE---PFPLPTEASIVKAAAGWAH 109
A +++ + WG S + LG + S + E+P+ P+ L IV+ +
Sbjct: 190 AFILTEEGGIYGWGFNISGELGLGDRFERS-QPTELPQNFFPYLLERGDRIVQLNFADRY 248
Query: 110 CVAVTEGGEVYTWGW 124
VA T G VY WG+
Sbjct: 249 LVARTAQGHVYVWGF 263
>TIGR_CMR|CBU_1217 [details] [associations]
symbol:CBU_1217 "hypothetical protein" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 EMBL:AE016828 GenomeReviews:AE016828_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 OMA:GYIYAWG RefSeq:NP_820212.1
ProteinModelPortal:Q83CB0 GeneID:1209121 KEGG:cbu:CBU_1217
PATRIC:17931169 HOGENOM:HOG000029001 ProtClustDB:CLSK914618
BioCyc:CBUR227377:GJ7S-1203-MONOMER Uniprot:Q83CB0
Length = 497
Score = 126 (49.4 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 42/152 (27%), Positives = 62/152 (40%)
Query: 310 RHSAVITDAGALLTFGWGLYGQCGQG-----STDDELSPNCVSSLL--GIQIEGVAAGLW 362
RH+ ++T+ G + +G+ + G+ G G S EL N LL G +I +
Sbjct: 188 RHAFILTEEGGIYGWGFNISGELGLGDRFERSQPTELPQNFFPYLLERGDRIVQLNFADR 247
Query: 363 HTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKS----VSCGARHT 418
+ + ++ G VY +Q P L H V G RHT
Sbjct: 248 YLVARTAQGHVYVWGFNYRGRLGLDDEQDRLHPVELSWDFFPEWHPDDYIIQVVVGDRHT 307
Query: 419 AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
+ G ++ WG N YGQLG D DRN P+
Sbjct: 308 LALTQLGYIYAWGKNSYGQLGFRDQQDRNRPA 339
Score = 122 (48.0 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 44/158 (27%), Positives = 61/158 (38%)
Query: 298 PGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSP-----NCVSSLLGI 352
P +Y+ + G RH+ +T G + +G YGQ G D P N LL
Sbjct: 293 PDDYIIQVVVGDRHTLALTQLGYIYAWGKNSYGQLGFRDQQDRNRPALLPWNRFPGLLER 352
Query: 353 Q---IEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDA---PSLENV 406
IE +A G ++ + G +Y + P LL P L
Sbjct: 353 NDRIIELIAGGA-RSLARTEQGFIYIWGARWLLVRGD--PEFRHHPMLLTENYFPGLRRR 409
Query: 407 --HSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGD 442
H + G HT + G ++ WG N YGQLGLGD
Sbjct: 410 GDHLVELIAGPDHTLARTEQGYIYAWGRNYYGQLGLGD 447
Score = 54 (24.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 99 SIVKAAAGWAHCVAVTEGGEVYTWGW 124
+IV+ + + H +TE G +Y WG+
Sbjct: 179 TIVQLLSDYRHAFILTEEGGIYGWGF 204
Score = 51 (23.0 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 21/75 (28%), Positives = 34/75 (45%)
Query: 57 AMAISDSRKLITWG---STD-DLGQSYVTSGKHGEIPE---PFPLPTEASIVKAAAGWAH 109
A +++ + WG S + LG + S + E+P+ P+ L IV+ +
Sbjct: 190 AFILTEEGGIYGWGFNISGELGLGDRFERS-QPTELPQNFFPYLLERGDRIVQLNFADRY 248
Query: 110 CVAVTEGGEVYTWGW 124
VA T G VY WG+
Sbjct: 249 LVARTAQGHVYVWGF 263
>UNIPROTKB|E9PDR5 [details] [associations]
symbol:IBTK "Inhibitor of Bruton tyrosine kinase"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS50012 EMBL:AL050333
HGNC:HGNC:17853 ChiTaRS:IBTK IPI:IPI00964822
ProteinModelPortal:E9PDR5 SMR:E9PDR5 Ensembl:ENST00000503631
UCSC:uc011dyw.1 ArrayExpress:E9PDR5 Bgee:E9PDR5 Uniprot:E9PDR5
Length = 1152
Score = 137 (53.3 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 56/196 (28%), Positives = 81/196 (41%)
Query: 274 SYGKDRSAALSRGSVNSEG-PG----FRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL 328
++G + + L GS NS+ P F G Y+K + HS ++ G + T G G
Sbjct: 146 TWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGP 205
Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXX 388
G+ G G L P V L G VAA HT+ ++ DG VY
Sbjct: 206 GGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQLGIIP 265
Query: 389 DQAE-TLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
+ +PR + A L+ V+ G HT + + V+ G N GQLG ++D N
Sbjct: 266 PPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWTREA-VYTMGLNG-GQLGC--LLDPN 321
Query: 448 IPSQVTIEGCVPRNVA 463
VT PR V+
Sbjct: 322 GEKCVT----APRQVS 333
>UNIPROTKB|E7EPI0 [details] [associations]
symbol:IBTK "Inhibitor of Bruton tyrosine kinase"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS50012 EMBL:AL050333
HGNC:HGNC:17853 ChiTaRS:IBTK IPI:IPI00964356
ProteinModelPortal:E7EPI0 SMR:E7EPI0 Ensembl:ENST00000510291
UCSC:uc011dyv.1 ArrayExpress:E7EPI0 Bgee:E7EPI0 Uniprot:E7EPI0
Length = 1338
Score = 137 (53.3 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 56/196 (28%), Positives = 81/196 (41%)
Query: 274 SYGKDRSAALSRGSVNSEG-PG----FRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL 328
++G + + L GS NS+ P F G Y+K + HS ++ G + T G G
Sbjct: 146 TWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGP 205
Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXX 388
G+ G G L P V L G VAA HT+ ++ DG VY
Sbjct: 206 GGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQLGIIP 265
Query: 389 DQAE-TLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
+ +PR + A L+ V+ G HT + + V+ G N GQLG ++D N
Sbjct: 266 PPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWTREA-VYTMGLNG-GQLGC--LLDPN 321
Query: 448 IPSQVTIEGCVPRNVA 463
VT PR V+
Sbjct: 322 GEKCVT----APRQVS 333
>UNIPROTKB|F1PB36 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 GO:GO:0008270 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
EMBL:AAEX03013255 EMBL:AAEX03013256 EMBL:AAEX03013257
Ensembl:ENSCAFT00000008311 Uniprot:F1PB36
Length = 4640
Score = 124 (48.7 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 26/70 (37%), Positives = 38/70 (54%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
++CG HS V+ + G + TFG+G +GQ G G + P V +L G + V AG HT
Sbjct: 907 VSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQ-VTAGSNHT 965
Query: 365 ICISSDGDVY 374
+ DG V+
Sbjct: 966 AVLLMDGQVF 975
Score = 112 (44.5 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 24/62 (38%), Positives = 35/62 (56%)
Query: 411 VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTL 470
VSCG H+ V+ ++G V+ +G+ ++GQLG GDV R P+ V V G HT
Sbjct: 907 VSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTAGSNHTA 966
Query: 471 LL 472
+L
Sbjct: 967 VL 968
Score = 99 (39.9 bits), Expect = 0.00041, Sum P(3) = 0.00041
Identities = 27/83 (32%), Positives = 39/83 (46%)
Query: 357 VAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGAR 416
V+ G H++ + +GDVY + P L+ A L S V+ G+
Sbjct: 907 VSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQA--LPGP-STQVTAGSN 963
Query: 417 HTAVIADDGKVFCWGWNKYGQLG 439
HTAV+ DG+VF +G GQLG
Sbjct: 964 HTAVLLMDGQVFTFGSFSKGQLG 986
Score = 71 (30.1 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
G++V +A G H+ V+ G + TFG GQCG+
Sbjct: 642 GHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGR 677
Score = 62 (26.9 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 23/79 (29%), Positives = 35/79 (44%)
Query: 49 VCGGGCGFAMAISDSRKLITWGSTDDLG--QSYVTSGKHGEIPEPFPLPTEASIVKAAAG 106
V G G FA+ + S K+ G LG Q ++GK E+P + IV + G
Sbjct: 495 VLGAGREFALMKTSSGKIYYTGKYQSLGIKQGGPSAGKWVELP----ITKSPKIVHFSVG 550
Query: 107 W--AHCVAVTEGGEVYTWG 123
+H + V E G ++ G
Sbjct: 551 HDGSHALLVAEDGSIFFTG 569
>UNIPROTKB|Q9P2D0 [details] [associations]
symbol:IBTK "Inhibitor of Bruton tyrosine kinase"
species:9606 "Homo sapiens" [GO:0016020 "membrane" evidence=IEA]
[GO:0001933 "negative regulation of protein phosphorylation"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0019901
"protein kinase binding" evidence=IDA] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=IDA] [GO:0051209
"release of sequestered calcium ion into cytosol" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=IDA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0019901
GO:GO:0016020 Pathway_Interaction_DB:bcr_5pathway GO:GO:0051209
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GO:GO:0030292 EMBL:DQ005633 EMBL:DQ005634
EMBL:DQ005635 EMBL:AB037838 EMBL:AL050333 EMBL:BC027490
EMBL:BC038244 EMBL:BC042171 EMBL:BC113696 EMBL:BC113698
EMBL:AL050018 EMBL:AF235049 IPI:IPI00792333 IPI:IPI00829736
IPI:IPI00910313 PIR:T08705 RefSeq:NP_056340.2 UniGene:Hs.306425
ProteinModelPortal:Q9P2D0 SMR:Q9P2D0 IntAct:Q9P2D0 MINT:MINT-215747
STRING:Q9P2D0 PhosphoSite:Q9P2D0 DMDM:134034141 PaxDb:Q9P2D0
PRIDE:Q9P2D0 DNASU:25998 Ensembl:ENST00000306270 GeneID:25998
KEGG:hsa:25998 UCSC:uc003pjl.1 UCSC:uc003pjm.2 CTD:25998
GeneCards:GC06M082879 HGNC:HGNC:17853 HPA:HPA023826 MIM:606457
neXtProt:NX_Q9P2D0 PharmGKB:PA134898277 HOVERGEN:HBG081779
InParanoid:Q9P2D0 OMA:VSALHHK OrthoDB:EOG4J6RQ1 ChiTaRS:IBTK
GenomeRNAi:25998 NextBio:47714 ArrayExpress:Q9P2D0 Bgee:Q9P2D0
Genevestigator:Q9P2D0 Uniprot:Q9P2D0
Length = 1353
Score = 137 (53.3 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 56/196 (28%), Positives = 81/196 (41%)
Query: 274 SYGKDRSAALSRGSVNSEG-PG----FRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL 328
++G + + L GS NS+ P F G Y+K + HS ++ G + T G G
Sbjct: 146 TWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGP 205
Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXX 388
G+ G G L P V L G VAA HT+ ++ DG VY
Sbjct: 206 GGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQLGIIP 265
Query: 389 DQAE-TLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
+ +PR + A L+ V+ G HT + + V+ G N GQLG ++D N
Sbjct: 266 PPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWTREA-VYTMGLNG-GQLGC--LLDPN 321
Query: 448 IPSQVTIEGCVPRNVA 463
VT PR V+
Sbjct: 322 GEKCVT----APRQVS 333
>UNIPROTKB|E9PMV6 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 IPI:IPI00976302 ProteinModelPortal:E9PMV6 SMR:E9PMV6
Ensembl:ENST00000529728 ArrayExpress:E9PMV6 Bgee:E9PMV6
Uniprot:E9PMV6
Length = 229
Score = 125 (49.1 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 44/165 (26%), Positives = 71/165 (43%)
Query: 314 VITDAGALLTFGWGLYGQCGQGSTDDE-LSPNCVSSLLGIQIEGVAAGLWHTICISSDGD 372
++T+ G +L+ G +GQ G + P + L ++ +AAGL H + ++ G
Sbjct: 1 MLTENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIE-LHKEKVVCIAAGLRHAVAATASGI 59
Query: 373 VYAXXXXXXXXXXXXXDQAETLPRLLDA--PS----LENVHSKSVSCGARHTAVIADDGK 426
V+ +TLP A PS LEN + V G+ H+A + D G+
Sbjct: 60 VFQWGTGLASCGRRLCP-GQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGE 118
Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVAC---GWWH 468
V+ WG NK+GQL + +P ++ V GW H
Sbjct: 119 VYVWGSNKHGQLA-NEAAFLPVPQKIEAHCFQNEKVTAIWSGWTH 162
Score = 117 (46.2 bits), Expect = 0.00016, P = 0.00016
Identities = 41/145 (28%), Positives = 63/145 (43%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQ----GST----DDELSPNCVSSLLGIQIEG 356
IA G RH+ T +G + +G GL CG+ G T P+ V+ L +
Sbjct: 44 IAAGLRHAVAATASGIVFQWGTGL-ASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMC 102
Query: 357 VAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLP--RLLDAPSLENVHSKSVSCG 414
V AG H+ ++ G+VY ++A LP + ++A +N ++ G
Sbjct: 103 VLAGSDHSASLTDAGEVYVWGSNKHGQLA---NEAAFLPVPQKIEAHCFQNEKVTAIWSG 159
Query: 415 ARHTAVIADDGKVFCWGWNKYGQLG 439
H + GK+F WG YGQLG
Sbjct: 160 WTHLVAQTETGKMFTWGRADYGQLG 184
>UNIPROTKB|J9PB77 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 GO:GO:0008270 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 PROSITE:PS00626 PROSITE:PS50012
InterPro:IPR004939 PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194
GeneTree:ENSGT00390000011403 PANTHER:PTHR12846 OMA:LLSILHW
EMBL:AAEX03013255 EMBL:AAEX03013256 EMBL:AAEX03013257
Ensembl:ENSCAFT00000044597 Uniprot:J9PB77
Length = 4727
Score = 124 (48.7 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 26/70 (37%), Positives = 38/70 (54%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
++CG HS V+ + G + TFG+G +GQ G G + P V +L G + V AG HT
Sbjct: 945 VSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQ-VTAGSNHT 1003
Query: 365 ICISSDGDVY 374
+ DG V+
Sbjct: 1004 AVLLMDGQVF 1013
Score = 112 (44.5 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 24/62 (38%), Positives = 35/62 (56%)
Query: 411 VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTL 470
VSCG H+ V+ ++G V+ +G+ ++GQLG GDV R P+ V V G HT
Sbjct: 945 VSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTAGSNHTA 1004
Query: 471 LL 472
+L
Sbjct: 1005 VL 1006
Score = 99 (39.9 bits), Expect = 0.00043, Sum P(3) = 0.00043
Identities = 27/83 (32%), Positives = 39/83 (46%)
Query: 357 VAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGAR 416
V+ G H++ + +GDVY + P L+ A L S V+ G+
Sbjct: 945 VSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQA--LPGP-STQVTAGSN 1001
Query: 417 HTAVIADDGKVFCWGWNKYGQLG 439
HTAV+ DG+VF +G GQLG
Sbjct: 1002 HTAVLLMDGQVFTFGSFSKGQLG 1024
Score = 71 (30.1 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
G++V +A G H+ V+ G + TFG GQCG+
Sbjct: 680 GHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGR 715
Score = 62 (26.9 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 23/79 (29%), Positives = 35/79 (44%)
Query: 49 VCGGGCGFAMAISDSRKLITWGSTDDLG--QSYVTSGKHGEIPEPFPLPTEASIVKAAAG 106
V G G FA+ + S K+ G LG Q ++GK E+P + IV + G
Sbjct: 533 VLGAGREFALMKTSSGKIYYTGKYQSLGIKQGGPSAGKWVELP----ITKSPKIVHFSVG 588
Query: 107 W--AHCVAVTEGGEVYTWG 123
+H + V E G ++ G
Sbjct: 589 HDGSHALLVAEDGSIFFTG 607
>UNIPROTKB|F1RQL8 [details] [associations]
symbol:IBTK "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051209 "release of sequestered calcium ion into
cytosol" evidence=IEA] [GO:0030292 "protein tyrosine kinase
inhibitor activity" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0051209
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 GO:GO:0030292
OMA:VSALHHK GeneTree:ENSGT00700000104160 EMBL:CU392845
Ensembl:ENSSSCT00000004926 Uniprot:F1RQL8
Length = 1346
Score = 135 (52.6 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 58/198 (29%), Positives = 83/198 (41%)
Query: 274 SYGKDRSAALSRGSVNSEG-PG----FRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL 328
++G + + L GS NS+ P F G Y+K + HS ++ G + T G G
Sbjct: 146 TWGDNTNFTLGHGSQNSKHHPELVDLFSRSGVYIKQVVLCKFHSVFLSQKGQVYTCGHGP 205
Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXX 388
G+ G G L P V L G VAA HT+ ++ DG VY
Sbjct: 206 GGRLGHGDEQTCLVPRLVEGLSGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQLGIIP 265
Query: 389 DQAE-TLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
+ +PR + A L+ V+ G HT + + V+ G N GQLG ++D
Sbjct: 266 PPSNCNVPRQMQAKYLKGRTIIGVAAGRFHTVLWTREA-VYTLGLNG-GQLG--HLLD-- 319
Query: 448 IPSQVTIEGCV--PRNVA 463
PS E CV PR V+
Sbjct: 320 -PSG---EKCVTAPRQVS 333
>UNIPROTKB|F1NZF2 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA] [GO:0021785
"branchiomotor neuron axon guidance" evidence=IEA] [GO:0021952
"central nervous system projection neuron axonogenesis"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0032880
"regulation of protein localization" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0051493
"regulation of cytoskeleton organization" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872 GO:GO:0030424
GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS50012
InterPro:IPR004939 PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194
GeneTree:ENSGT00390000011403 PANTHER:PTHR12846 OMA:LLSILHW
EMBL:AC149787 EMBL:AADN02042674 IPI:IPI00599046
Ensembl:ENSGALT00000027346 Uniprot:F1NZF2
Length = 4580
Score = 123 (48.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 25/70 (35%), Positives = 38/70 (54%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
++CG HS ++ + G + TFG+G +GQ G G + P V +L G + V AG HT
Sbjct: 845 VSCGFHHSVILMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQ-VTAGSNHT 903
Query: 365 ICISSDGDVY 374
+ DG V+
Sbjct: 904 AILLMDGQVF 913
Score = 112 (44.5 bits), Expect = 4.3e-05, Sum P(3) = 4.3e-05
Identities = 23/62 (37%), Positives = 35/62 (56%)
Query: 411 VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTL 470
VSCG H+ ++ ++G V+ +G+ ++GQLG GDV R P+ V V G HT
Sbjct: 845 VSCGFHHSVILMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTAGSNHTA 904
Query: 471 LL 472
+L
Sbjct: 905 IL 906
Score = 71 (30.1 bits), Expect = 4.3e-05, Sum P(3) = 4.3e-05
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
G++V +A G H+ V+ G + TFG GQCG+
Sbjct: 580 GHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGR 615
Score = 63 (27.2 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 20/68 (29%), Positives = 31/68 (45%)
Query: 76 GQSYVTSGKHGEIPEPFPLPTEAS---IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGR 132
G+ Y+ GK + L T+ + + A G AH + + GEV+T+G GR
Sbjct: 557 GELYMF-GKDAIYSDSTSLVTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGR 615
Query: 133 VFGDLSTG 140
G +S G
Sbjct: 616 DTGSMSQG 623
Score = 58 (25.5 bits), Expect = 4.3e-05, Sum P(3) = 4.3e-05
Identities = 21/79 (26%), Positives = 36/79 (45%)
Query: 49 VCGGGCGFAMAISDSRKLITWGSTDDLG--QSYVTSGKHGEIPEPFPLPTEASIVKAAAG 106
V G G FA+ + S K+ G LG Q ++GK E+P + I++ + G
Sbjct: 433 VLGAGREFALMKTASGKIYYTGKYQSLGIKQGGPSAGKWVELP----ITKSPKIIQFSVG 488
Query: 107 W--AHCVAVTEGGEVYTWG 123
+H + V + G ++ G
Sbjct: 489 HDGSHALLVADDGSIFFTG 507
>ZFIN|ZDB-GENE-030616-132 [details] [associations]
symbol:mycbp2 "MYC binding protein 2" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0021986 "habenula
development" evidence=IMP] [GO:0016198 "axon choice point
recognition" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0007411 "axon guidance" evidence=IMP] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0042068 "regulation of pteridine
metabolic process" evidence=IMP] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-030616-132
GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
GO:GO:0008270 GO:GO:0016198 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284 GO:GO:0031290
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
GO:GO:0021986 EMBL:BX510646 EMBL:AL840634 EMBL:CR628366
EMBL:CU138551 IPI:IPI00993071 Ensembl:ENSDART00000124901
ArrayExpress:F1QI76 Bgee:F1QI76 GO:GO:0042068 Uniprot:F1QI76
Length = 4648
Score = 129 (50.5 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 27/70 (38%), Positives = 39/70 (55%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
++CG HS V+ + G + TFG+G +GQ G G + SP V +L G + V AG HT
Sbjct: 930 VSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGSPTLVQALPGPSTQ-VTAGSNHT 988
Query: 365 ICISSDGDVY 374
+ DG V+
Sbjct: 989 AVLLMDGQVF 998
Score = 111 (44.1 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 24/62 (38%), Positives = 35/62 (56%)
Query: 411 VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTL 470
VSCG H+ V+ ++G V+ +G+ ++GQLG GDV R P+ V V G HT
Sbjct: 930 VSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGSPTLVQALPGPSTQVTAGSNHTA 989
Query: 471 LL 472
+L
Sbjct: 990 VL 991
Score = 80 (33.2 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
G++V +A G H+ V+T +G + TFG GQCG+
Sbjct: 671 GHFVTQVAMGKAHTCVLTKSGEVWTFGVNNKGQCGR 706
Score = 63 (27.2 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 100 IVKAAAGWAHCVAVTEGGEVYTWGWK---EC-------VPSGRVFGDLSTGTGLDKDV 147
+ + A G AH +T+ GEV+T+G +C +G+ FG + T +D+D+
Sbjct: 674 VTQVAMGKAHTCVLTKSGEVWTFGVNNKGQCGRDTGAMSQAGKAFGVENMATAMDEDL 731
Score = 43 (20.2 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 26/102 (25%), Positives = 45/102 (44%)
Query: 36 VRLPLTVGSAWRDVCGGGCG-FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPF-P 93
V LP+T G G A+ +++ + GS G+ S K P+P+ P
Sbjct: 563 VELPVTKSPKIVQFSVGHDGSHALLVAEDGSVFFTGSASK-GEDG-ESTKSRRQPKPYKP 620
Query: 94 -----LPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPS 130
L T+ ++ A + + VT+ GE+Y +G K+ + S
Sbjct: 621 KKMIKLETKMAVYTACNNGSSSI-VTKDGELYMFG-KDAIYS 660
>RGD|1312048 [details] [associations]
symbol:Mycbp2 "MYC binding protein 2, E3 ubiquitin protein
ligase" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0008045
"motor neuron axon guidance" evidence=ISO] [GO:0015630 "microtubule
cytoskeleton" evidence=ISO] [GO:0021785 "branchiomotor neuron axon
guidance" evidence=ISO] [GO:0021952 "central nervous system
projection neuron axonogenesis" evidence=ISO] [GO:0030424 "axon"
evidence=ISO] [GO:0032880 "regulation of protein localization"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] [GO:0048667 "cell morphogenesis involved in neuron
differentiation" evidence=ISO] [GO:0051493 "regulation of
cytoskeleton organization" evidence=ISO] InterPro:IPR027047
RGD:1312048 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 InterPro:IPR014756 SUPFAM:SSF81296 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194 EMBL:CH473951
PANTHER:PTHR12846 IPI:IPI00950595 UniGene:Rn.13538
Ensembl:ENSRNOT00000064927 UCSC:RGD:1312048 Uniprot:D4A722
Length = 2667
Score = 124 (48.7 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 26/70 (37%), Positives = 38/70 (54%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
++CG HS V+ + G + TFG+G +GQ G G + P V +L G + V AG HT
Sbjct: 921 VSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQ-VTAGSNHT 979
Query: 365 ICISSDGDVY 374
+ DG V+
Sbjct: 980 AVLVMDGQVF 989
Score = 116 (45.9 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 25/69 (36%), Positives = 38/69 (55%)
Query: 406 VHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACG 465
V + VSCG H+ V+ ++G V+ +G+ ++GQLG GDV R P+ V V G
Sbjct: 916 VRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTAG 975
Query: 466 WWHTLLLAV 474
HT +L +
Sbjct: 976 SNHTAVLVM 984
Score = 71 (30.1 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
G++V +A G H+ V+ G + TFG GQCG+
Sbjct: 656 GHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGR 691
Score = 57 (25.1 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 100 IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTG 140
+ + A G AH + + GEV+T+G GR G ++ G
Sbjct: 659 VTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGRDTGAMNQG 699
>MGI|MGI:1921268 [details] [associations]
symbol:Als2 "amyotrophic lateral sclerosis 2 (juvenile)"
species:10090 "Mus musculus" [GO:0001662 "behavioral fear response"
evidence=IMP] [GO:0001726 "ruffle" evidence=IDA] [GO:0001881
"receptor recycling" evidence=IMP] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005089 "Rho
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005097 "Rab GTPase activator activity" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0005769 "early endosome"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO] [GO:0006979 "response to
oxidative stress" evidence=IMP] [GO:0007032 "endosome organization"
evidence=ISO] [GO:0007041 "lysosomal transport" evidence=ISO]
[GO:0007409 "axonogenesis" evidence=ISO] [GO:0007528 "neuromuscular
junction development" evidence=IMP] [GO:0007626 "locomotory
behavior" evidence=IMP] [GO:0008104 "protein localization"
evidence=IMP] [GO:0008219 "cell death" evidence=ISO] [GO:0014069
"postsynaptic density" evidence=IDA] [GO:0016020 "membrane"
evidence=ISO] [GO:0016050 "vesicle organization" evidence=IDA]
[GO:0016197 "endosomal transport" evidence=IMP] [GO:0016601 "Rac
protein signal transduction" evidence=ISO] [GO:0017112 "Rab
guanyl-nucleotide exchange factor activity" evidence=ISO]
[GO:0017137 "Rab GTPase binding" evidence=ISO] [GO:0030027
"lamellipodium" evidence=IDA] [GO:0030424 "axon" evidence=ISO]
[GO:0030425 "dendrite" evidence=ISO] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030675 "Rac GTPase activator activity"
evidence=ISO] [GO:0030676 "Rac guanyl-nucleotide exchange factor
activity" evidence=ISO] [GO:0031982 "vesicle" evidence=ISO]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IDA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISO] [GO:0035023 "regulation of Rho protein signal
transduction" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IMP] [GO:0042802 "identical protein
binding" evidence=ISO] [GO:0042803 "protein homodimerization
activity" evidence=ISO] [GO:0043005 "neuron projection"
evidence=ISO] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0043197 "dendritic spine" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0043539 "protein
serine/threonine kinase activator activity" evidence=ISO]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=ISO] [GO:0048365 "Rac GTPase binding" evidence=ISO]
[GO:0048812 "neuron projection morphogenesis" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=ISO] [GO:0071902
"positive regulation of protein serine/threonine kinase activity"
evidence=ISO] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS00741 PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233
MGI:MGI:1921268 INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204
GO:GO:0005829 GO:GO:0043234 GO:GO:0042803 GO:GO:0014069
GO:GO:0008104 GO:GO:0006979 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812 GO:GO:0007626
GO:GO:0035249 GO:GO:0043539 GO:GO:0030027 GO:GO:0016197
GO:GO:0030426 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH466548 GO:GO:0001726
eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493
SMART:SM00698 PROSITE:PS51205 GeneTree:ENSGT00600000084242
CTD:57679 HOVERGEN:HBG037320 KO:K04575 OMA:AKPAIDF
OrthoDB:EOG4FTVZP ChiTaRS:ALS2 GO:GO:0005769 GO:GO:0031982
GO:GO:0017137 GO:GO:0017112 GO:GO:0030676 GO:GO:0001662
GO:GO:0032855 GO:GO:0001881 GO:GO:0051036 GO:GO:0032313
GO:GO:0016050 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AB053307 EMBL:AC153652 EMBL:BC031479
EMBL:BC046828 EMBL:AK014320 IPI:IPI00170364 IPI:IPI00309844
RefSeq:NP_001153420.2 RefSeq:NP_082993.4 RefSeq:NP_666221.1
UniGene:Mm.272078 STRING:Q920R0 PhosphoSite:Q920R0 PaxDb:Q920R0
PRIDE:Q920R0 Ensembl:ENSMUST00000027178 Ensembl:ENSMUST00000163058
GeneID:74018 KEGG:mmu:74018 UCSC:uc007bdm.2 UCSC:uc007bdn.2
HOGENOM:HOG000033908 InParanoid:Q920R0 NextBio:339546
Genevestigator:Q920R0 GermOnline:ENSMUSG00000026024 Uniprot:Q920R0
Length = 1651
Score = 133 (51.9 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 55/194 (28%), Positives = 84/194 (43%)
Query: 293 PGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGI 352
PG+ G V A G RH ++T+ G + +FG + + + SP S+L+G
Sbjct: 36 PGWG--GKTVLQAALGVRHGVLLTEDGEVYSFGTLPWKS--ESAEICPSSPLLESALVGH 91
Query: 353 QIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQ--AETLP-RLLDA---PSLENV 406
+ VA G +H+ ++ G VY Q E P + D+ PSL V
Sbjct: 92 HVITVATGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVPEPSPVSISDSETSPSLA-V 150
Query: 407 HSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL-GDVIDRNIPSQVT-IEGCVPRNVAC 464
++CG HT ++ ++ W W QLGL P +V + G V VAC
Sbjct: 151 RILQLACGEEHTLALSLSREI--WAWGTGCQLGLITTTFPVTKPQKVEHLAGRVVLQVAC 208
Query: 465 GWWHTLLLA--VPP 476
G +H+L L +PP
Sbjct: 209 GAFHSLALVQCLPP 222
>UNIPROTKB|F1NXV1 [details] [associations]
symbol:IBTK "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=IEA] [GO:0051209 "release of sequestered calcium ion into
cytosol" evidence=IEA] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 GO:GO:0051209 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GO:GO:0030292 OMA:VSALHHK
GeneTree:ENSGT00700000104160 EMBL:AADN02002424 EMBL:AADN02002425
IPI:IPI00590269 Ensembl:ENSGALT00000025575 Uniprot:F1NXV1
Length = 1359
Score = 132 (51.5 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 41/162 (25%), Positives = 72/162 (44%)
Query: 316 TDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLL--GIQIEGVAAGLWHTICISSDGDV 373
TD + T+G + G G + P V + I+ V +H++ +S G +
Sbjct: 142 TDLTEVYTWGNNINFTLGHGGQQSKHHPELVDLFPRNSVYIKQVVLCKFHSVFLSHKGQI 201
Query: 374 YAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWN 433
Y +Q +PRL++ L + ++ HT V+ +DG V+ +G N
Sbjct: 202 YTCGHGQGGRLGHGDEQTCLVPRLVEG--LSSHQCSQIAAAKDHTVVLTEDGCVYTFGLN 259
Query: 434 KYGQLG-LGDVIDRNIPSQV---TIEGCVPRNVACGWWHTLL 471
+ QLG L + ++P QV ++G + VA G +HT+L
Sbjct: 260 TFHQLGILPPPANCSVPRQVQAKNLKGRMVIGVAAGRFHTVL 301
Score = 132 (51.5 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 47/164 (28%), Positives = 69/164 (42%)
Query: 301 YVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAG 360
Y+K + HS ++ G + T G G G+ G G L P V L Q +AA
Sbjct: 181 YIKQVVLCKFHSVFLSHKGQIYTCGHGQGGRLGHGDEQTCLVPRLVEGLSSHQCSQIAAA 240
Query: 361 LWHTICISSDGDVYAXXXXXXXXXXXXXDQAE-TLPRLLDAPSLENVHSKSVSCGARHTA 419
HT+ ++ DG VY A ++PR + A +L+ V+ G HT
Sbjct: 241 KDHTVVLTEDGCVYTFGLNTFHQLGILPPPANCSVPRQVQAKNLKGRMVIGVAAGRFHTV 300
Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVA 463
+ + V+ G N GQLG ++D N VT PR V+
Sbjct: 301 LWTKEA-VYTMGLNG-GQLGY--LLDPNGEKCVT----APRQVS 336
>RGD|1310372 [details] [associations]
symbol:Als2 "amyotrophic lateral sclerosis 2 (juvenile)"
species:10116 "Rattus norvegicus" [GO:0001662 "behavioral fear
response" evidence=IEA;ISO] [GO:0001701 "in utero embryonic
development" evidence=IEP] [GO:0001726 "ruffle" evidence=IEA;ISO]
[GO:0001881 "receptor recycling" evidence=IEA;ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=ISO;ISS] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0005769 "early endosome" evidence=ISO;ISS]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=ISO;ISS] [GO:0006979 "response to oxidative stress"
evidence=IEA;ISO] [GO:0007032 "endosome organization" evidence=ISO]
[GO:0007409 "axonogenesis" evidence=IMP] [GO:0007528 "neuromuscular
junction development" evidence=IEA;ISO] [GO:0007626 "locomotory
behavior" evidence=IEA;ISO] [GO:0008104 "protein localization"
evidence=IEA;ISO] [GO:0008219 "cell death" evidence=IMP]
[GO:0014069 "postsynaptic density" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=IDA] [GO:0016050 "vesicle organization"
evidence=IEA;ISO] [GO:0016197 "endosomal transport"
evidence=IEA;ISO] [GO:0016601 "Rac protein signal transduction"
evidence=IDA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=ISO;ISS] [GO:0017137 "Rab GTPase binding"
evidence=ISO;ISS] [GO:0030027 "lamellipodium" evidence=IEA;ISO]
[GO:0030424 "axon" evidence=IDA] [GO:0030425 "dendrite"
evidence=ISO;ISS;IDA] [GO:0030426 "growth cone" evidence=IDA]
[GO:0030676 "Rac guanyl-nucleotide exchange factor activity"
evidence=ISO;ISS] [GO:0031982 "vesicle" evidence=ISO;ISS]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IEA;ISO]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISO;ISS] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA;ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO;ISS] [GO:0043005 "neuron
projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0043197 "dendritic spine" evidence=ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] [GO:0043234 "protein complex" evidence=ISO;ISS]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=ISO;ISS] [GO:0045860 "positive regulation of protein
kinase activity" evidence=ISO;ISS] [GO:0048812 "neuron projection
morphogenesis" evidence=ISO;ISS] [GO:0051036 "regulation of
endosome size" evidence=ISO;ISS] [GO:0071902 "positive regulation
of protein serine/threonine kinase activity" evidence=ISO]
InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741
PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233 RGD:1310372
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0042803 GO:GO:0014069
GO:GO:0008104 GO:GO:0006979 GO:GO:0016020 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0008219 GO:GO:0030424
GO:GO:0043025 GO:GO:0030425 GO:GO:0007528 GO:GO:0001701
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
GO:GO:0030426 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0007409 GO:GO:0016601
eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493
SMART:SM00698 PROSITE:PS51205 GeneTree:ENSGT00600000084242
CTD:57679 HOVERGEN:HBG037320 KO:K04575 OrthoDB:EOG4FTVZP
GO:GO:0005769 GO:GO:0031982 GO:GO:0017137 GO:GO:0017112
GO:GO:0030676 GO:GO:0001662 GO:GO:0032855 GO:GO:0001881
GO:GO:0051036 GO:GO:0032313 GO:GO:0016050 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOGENOM:HOG000033908 EMBL:AABR03068212 EMBL:BK005190
IPI:IPI00366955 RefSeq:NP_001013431.1 UniGene:Rn.219733
ProteinModelPortal:P0C5Y8 STRING:P0C5Y8 PhosphoSite:P0C5Y8
Ensembl:ENSRNOT00000035209 GeneID:363235 KEGG:rno:363235
UCSC:RGD:1310372 InParanoid:P0C5Y8 NextBio:682932
Genevestigator:P0C5Y8 Uniprot:P0C5Y8
Length = 1651
Score = 130 (50.8 bits), Expect = 0.00013, P = 0.00013
Identities = 52/193 (26%), Positives = 84/193 (43%)
Query: 293 PGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGI 352
PG+ G V A G +H ++T+ G + +FG + + + SP S+L+G
Sbjct: 36 PGWG--GKTVLQAALGVKHGVLLTEDGEVYSFGTLPWKS--EAAEICPSSPLLESALVGH 91
Query: 353 QIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQ--AETLP-RLLDAPS--LENVH 407
+ VA G +H+ ++ G VY Q +E P + D+ + L V
Sbjct: 92 HVVTVATGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVSEPSPVSISDSETSPLLAVR 151
Query: 408 SKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL-GDVIDRNIPSQVT-IEGCVPRNVACG 465
++CG HT ++ ++ W W QLGL P +V + G V VACG
Sbjct: 152 ILQLACGEEHTLALSISREI--WAWGTGCQLGLITTTFPVTKPQKVEHLAGRVVLQVACG 209
Query: 466 WWHTLLLA--VPP 476
+H+L L +PP
Sbjct: 210 AFHSLALVQCLPP 222
>UNIPROTKB|D4A2D3 [details] [associations]
symbol:Mycbp2 "Protein Mycbp2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 RGD:1312048 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872
GO:GO:0030424 GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
OrthoDB:EOG4VQ9NB GO:GO:0021785 IPI:IPI00765932
ProteinModelPortal:D4A2D3 Ensembl:ENSRNOT00000014583
ArrayExpress:D4A2D3 Uniprot:D4A2D3
Length = 4715
Score = 124 (48.7 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 26/70 (37%), Positives = 38/70 (54%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
++CG HS V+ + G + TFG+G +GQ G G + P V +L G + V AG HT
Sbjct: 907 VSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQ-VTAGSNHT 965
Query: 365 ICISSDGDVY 374
+ DG V+
Sbjct: 966 AVLVMDGQVF 975
Score = 116 (45.9 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 25/69 (36%), Positives = 38/69 (55%)
Query: 406 VHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACG 465
V + VSCG H+ V+ ++G V+ +G+ ++GQLG GDV R P+ V V G
Sbjct: 902 VRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTAG 961
Query: 466 WWHTLLLAV 474
HT +L +
Sbjct: 962 SNHTAVLVM 970
Score = 71 (30.1 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
G++V +A G H+ V+ G + TFG GQCG+
Sbjct: 642 GHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGR 677
Score = 57 (25.1 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 100 IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTG 140
+ + A G AH + + GEV+T+G GR G ++ G
Sbjct: 645 VTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGRDTGAMNQG 685
>UNIPROTKB|F1SI31 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051036 "regulation of endosome size" evidence=IEA]
[GO:0048812 "neuron projection morphogenesis" evidence=IEA]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=IEA] [GO:0032313 "regulation of Rab GTPase activity"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0017137 "Rab GTPase
binding" evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0016050 "vesicle organization" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0008104
"protein localization" evidence=IEA] [GO:0007626 "locomotory
behavior" evidence=IEA] [GO:0007528 "neuromuscular junction
development" evidence=IEA] [GO:0006979 "response to oxidative
stress" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005769 "early endosome"
evidence=IEA] [GO:0001881 "receptor recycling" evidence=IEA]
[GO:0001726 "ruffle" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0005543 "phospholipid binding"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408
Pfam:PF00415 Pfam:PF02204 GO:GO:0005829 GO:GO:0005813 GO:GO:0043234
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 OMA:AKPAIDF GO:GO:0005769
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Ensembl:ENSSSCT00000017539 Uniprot:F1SI31
Length = 1644
Score = 96 (38.9 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 29/101 (28%), Positives = 45/101 (44%)
Query: 323 TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXX 382
T+G G GQ G G L P CV L G ++ + AG +H++ +++ VY+
Sbjct: 524 TWGKGKDGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNTFG 583
Query: 383 XXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
D T+PRL S V S V+ G ++ + D
Sbjct: 584 QLGHS-DFPTTVPRLAKMNSENGVWS--VAAGQDYSLFLVD 621
Score = 80 (33.2 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 33/117 (28%), Positives = 56/117 (47%)
Query: 17 WGYLPGALPQRSPIL-SPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDL 75
W P L SPIL + LV + +TV + G + A+++S + WG +
Sbjct: 70 WRSEPAELCPSSPILENALVGQYVVTVAT--------GSFHSGAVTESGVVYMWGE-NSA 120
Query: 76 GQSYVTSGKHGEIPEPFPLP---TEAS------IVKAAAGWAHCVAVTEGGEVYTWG 123
GQ V + ++ +PEP P+ +E S I++ A G H +A++ E++ WG
Sbjct: 121 GQCAVANQQY--VPEPNPVSISDSETSPLLAVRILQLACGEEHTLALSISREIWAWG 175
Score = 77 (32.2 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 22/66 (33%), Positives = 33/66 (50%)
Query: 82 SGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG---WK----ECVPSGRVF 134
+G PE P T ++++AA G H V +TE GEVY++G W+ E PS +
Sbjct: 25 AGSCSVTPERLPGWTGKTVLQAALGVKHGVLLTEDGEVYSFGTLPWRSEPAELCPSSPIL 84
Query: 135 GDLSTG 140
+ G
Sbjct: 85 ENALVG 90
Score = 49 (22.3 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 11/17 (64%), Positives = 12/17 (70%)
Query: 221 VRIATVAAGGRHTLALS 237
VRI +A G HTLALS
Sbjct: 150 VRILQLACGEEHTLALS 166
>UNIPROTKB|Q5BIW4 [details] [associations]
symbol:ALS2 "Alsin" species:9598 "Pan troglodytes"
[GO:0001662 "behavioral fear response" evidence=ISS] [GO:0001726
"ruffle" evidence=ISS] [GO:0001881 "receptor recycling"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005769
"early endosome" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0006979 "response to oxidative stress" evidence=ISS]
[GO:0007528 "neuromuscular junction development" evidence=ISS]
[GO:0007626 "locomotory behavior" evidence=ISS] [GO:0008104
"protein localization" evidence=ISS] [GO:0014069 "postsynaptic
density" evidence=ISS] [GO:0016050 "vesicle organization"
evidence=ISS] [GO:0016197 "endosomal transport" evidence=ISS]
[GO:0017112 "Rab guanyl-nucleotide exchange factor activity"
evidence=ISS] [GO:0017137 "Rab GTPase binding" evidence=ISS]
[GO:0030027 "lamellipodium" evidence=ISS] [GO:0030425 "dendrite"
evidence=ISS] [GO:0030676 "Rac guanyl-nucleotide exchange factor
activity" evidence=ISS] [GO:0031982 "vesicle" evidence=ISS]
[GO:0032313 "regulation of Rab GTPase activity" evidence=ISS]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISS] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=ISS] [GO:0042803 "protein homodimerization activity"
evidence=ISS] [GO:0043197 "dendritic spine" evidence=ISS]
[GO:0043234 "protein complex" evidence=ISS] [GO:0043539 "protein
serine/threonine kinase activator activity" evidence=ISS]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=ISS] [GO:0048812 "neuron projection morphogenesis"
evidence=ISS] [GO:0051036 "regulation of endosome size"
evidence=ISS] [GO:0071902 "positive regulation of protein
serine/threonine kinase activity" evidence=ISS] [GO:0005813
"centrosome" evidence=ISS] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=ISS] InterPro:IPR000219
InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741 PROSITE:PS50003
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005829 GO:GO:0043234 GO:GO:0042803
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0030027
GO:GO:0016197 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0001726 eggNOG:COG4642
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 CTD:57679 HOVERGEN:HBG037320 KO:K04575
OrthoDB:EOG4FTVZP GO:GO:0005769 GO:GO:0031982 GO:GO:0017137
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOGENOM:HOG000033908 EMBL:BK005194 RefSeq:NP_001073389.1
UniGene:Ptr.813 ProteinModelPortal:Q5BIW4 STRING:Q5BIW4
PRIDE:Q5BIW4 GeneID:470613 KEGG:ptr:470613 InParanoid:Q5BIW4
NextBio:20847741 Uniprot:Q5BIW4
Length = 1657
Score = 98 (39.6 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 29/101 (28%), Positives = 45/101 (44%)
Query: 323 TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXX 382
T+G G GQ G G L P CV L G ++ + AG +H++ +++ VY+
Sbjct: 530 TWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNTFG 589
Query: 383 XXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
D T+PRL S V S V+ G ++ + D
Sbjct: 590 QLGHS-DFPTTVPRLAKISSENGVWS--VAAGRDYSLFLVD 627
Score = 79 (32.9 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 32/116 (27%), Positives = 54/116 (46%)
Query: 19 YLPGALPQRS-PI-LSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLG 76
Y G LP RS P+ + P L + + G + A++D+ WG + G
Sbjct: 63 YSFGTLPWRSGPVEICPSSPILENALVGQYVVTVATGSFHSGAVTDNGVAYMWGE-NSAG 121
Query: 77 QSYVTSGKHGEIPEPFPLP---TEAS------IVKAAAGWAHCVAVTEGGEVYTWG 123
Q V + ++ +PEP P+ +EAS I++ A G H +A++ E++ WG
Sbjct: 122 QCAVANQQY--VPEPNPVSIADSEASPLLAVRILQLACGEEHTLALSISREIWAWG 175
Score = 69 (29.3 bits), Expect = 0.00076, Sum P(3) = 0.00076
Identities = 20/59 (33%), Positives = 30/59 (50%)
Query: 89 PEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG---WK----ECVPSGRVFGDLSTG 140
PE P ++++AA G H V +TE GEVY++G W+ E PS + + G
Sbjct: 32 PERLPGWGGKTVLQAALGVKHGVLLTEDGEVYSFGTLPWRSGPVEICPSSPILENALVG 90
Score = 49 (22.3 bits), Expect = 0.00076, Sum P(3) = 0.00076
Identities = 11/17 (64%), Positives = 12/17 (70%)
Query: 221 VRIATVAAGGRHTLALS 237
VRI +A G HTLALS
Sbjct: 150 VRILQLACGEEHTLALS 166
>RGD|1311697 [details] [associations]
symbol:Ibtk "inhibitor of Bruton agammaglobulinemia tyrosine
kinase" species:10116 "Rattus norvegicus" [GO:0001933 "negative
regulation of protein phosphorylation" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0030292
"protein tyrosine kinase inhibitor activity" evidence=ISO]
[GO:0051209 "release of sequestered calcium ion into cytosol"
evidence=ISO] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 GO:GO:0051209 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GO:GO:0030292 OrthoDB:EOG4J6RQ1
GeneTree:ENSGT00700000104160 IPI:IPI00370548
Ensembl:ENSRNOT00000056930 ArrayExpress:D3ZH46 Uniprot:D3ZH46
Length = 1352
Score = 130 (50.8 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 44/163 (26%), Positives = 70/163 (42%)
Query: 316 TDAGALLTFGWGLYGQCGQGSTDDELSPNCVS--SLLGIQIEGVAAGLWHTICISSDGDV 373
TD + T+G G GS + + P + S + ++ V +H++ +S G V
Sbjct: 139 TDPTEVYTWGDNTNFTLGHGSQNSKHHPELLDLFSRSRVYVKQVVLCKFHSVFLSQQGQV 198
Query: 374 YAXXXXXXXXXXXXXDQAETLPRLLDAPSLENVHSKSVSCGAR-HTAVIADDGKVFCWGW 432
Y +Q +PRL++ S HS S A+ HT V+ +DG V+ +G
Sbjct: 199 YTCGHGRGGRLGHGDEQTCLVPRLVEGLS---GHSCSQVAAAKDHTVVLTEDGCVYTFGL 255
Query: 433 NKYGQLGL-GDVIDRNIPSQVTIEGCVPRNVAC--GW--WHTL 470
N + QLG+ N+P Q+T+ V C W W L
Sbjct: 256 NTFHQLGIIPPPSSCNVPRQLTVRMKKGHTVVCRKAWRFWQVL 298
Score = 43 (20.2 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 10/17 (58%), Positives = 11/17 (64%)
Query: 108 AHCVAV-TEGGEVYTWG 123
AH V T+ EVYTWG
Sbjct: 132 AHVVFKNTDPTEVYTWG 148
>UNIPROTKB|Q96Q42 [details] [associations]
symbol:ALS2 "Alsin" species:9606 "Homo sapiens" [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001881 "receptor recycling"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0007626
"locomotory behavior" evidence=IEA] [GO:0008104 "protein
localization" evidence=IEA] [GO:0008219 "cell death" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016050 "vesicle organization"
evidence=IEA] [GO:0016197 "endosomal transport" evidence=IEA]
[GO:0016601 "Rac protein signal transduction" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0032313 "regulation of Rab
GTPase activity" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0005769 "early endosome"
evidence=IDA] [GO:0007032 "endosome organization" evidence=IGI;NAS]
[GO:0043234 "protein complex" evidence=IDA] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0017137 "Rab GTPase binding" evidence=NAS;IDA] [GO:0051036
"regulation of endosome size" evidence=IEP] [GO:0032855 "positive
regulation of Rac GTPase activity" evidence=IDA] [GO:0035022
"positive regulation of Rac protein signal transduction"
evidence=IC] [GO:0030425 "dendrite" evidence=IDA] [GO:0048812
"neuron projection morphogenesis" evidence=IDA] [GO:0043539
"protein serine/threonine kinase activator activity" evidence=IDA]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=IDA] [GO:0001726 "ruffle" evidence=ISS] [GO:0030027
"lamellipodium" evidence=ISS] [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=NAS] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0030426 "growth cone" evidence=ISS] [GO:0005813 "centrosome"
evidence=IDA] [GO:0071902 "positive regulation of protein
serine/threonine kinase activity" evidence=IDA] InterPro:IPR000219
InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741 PROSITE:PS50003
PROSITE:PS50010 SMART:SM00233 EMBL:AB053305 EMBL:AB053306
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0014069 GO:GO:0008104
GO:GO:0006979 GO:GO:0016020 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0008219 EMBL:CH471063 GO:GO:0030424
GO:GO:0043025 GO:GO:0030425 GO:GO:0007528 GO:GO:0001701
GO:GO:0048812 GO:GO:0007626 GO:GO:0035249 GO:GO:0043539
GO:GO:0030027 GO:GO:0016197 GO:GO:0030426 Gene3D:1.20.900.10
SUPFAM:SSF48065 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0007409 GO:GO:0001726 GO:GO:0016601
GO:GO:0007032 eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123
Pfam:PF02493 SMART:SM00698 PROSITE:PS51205 EMBL:AF391100
EMBL:AB046783 EMBL:AK023024 EMBL:AC007242 EMBL:AC007279
EMBL:BC029174 IPI:IPI00242146 IPI:IPI00295004 IPI:IPI00295005
RefSeq:NP_001129217.1 RefSeq:NP_065970.2 UniGene:Hs.471096
UniGene:Hs.621812 ProteinModelPortal:Q96Q42 SMR:Q96Q42
MINT:MINT-1632128 STRING:Q96Q42 PhosphoSite:Q96Q42 DMDM:296434394
PaxDb:Q96Q42 PRIDE:Q96Q42 Ensembl:ENST00000264276
Ensembl:ENST00000467448 GeneID:57679 KEGG:hsa:57679 UCSC:uc002uyo.3
UCSC:uc002uyq.3 UCSC:uc002uyr.3 CTD:57679 GeneCards:GC02M202564
H-InvDB:HIX0200249 HGNC:HGNC:443 HPA:HPA046588 MIM:205100
MIM:606352 MIM:606353 MIM:607225 neXtProt:NX_Q96Q42 Orphanet:803
Orphanet:293168 Orphanet:300605 Orphanet:247604 PharmGKB:PA24732
HOVERGEN:HBG037320 InParanoid:Q96Q42 KO:K04575 OMA:AKPAIDF
OrthoDB:EOG4FTVZP ChiTaRS:ALS2 GenomeRNAi:57679 NextBio:64490
ArrayExpress:Q96Q42 Bgee:Q96Q42 CleanEx:HS_ALS2
Genevestigator:Q96Q42 GermOnline:ENSG00000003393 GO:GO:0005769
GO:GO:0031982 GO:GO:0017137 GO:GO:0017112 GO:GO:0030676
GO:GO:0005087 GO:GO:0001662 GO:GO:0032855 GO:GO:0035022
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
Uniprot:Q96Q42
Length = 1657
Score = 97 (39.2 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 28/101 (27%), Positives = 45/101 (44%)
Query: 323 TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXX 382
T+G G GQ G G L P CV L G ++ + AG +H++ +++ VY+
Sbjct: 530 TWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNTFG 589
Query: 383 XXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
D T+PRL S V S ++ G ++ + D
Sbjct: 590 QLGHS-DFPTTVPRLAKISSENGVWS--IAAGRDYSLFLVD 627
Score = 79 (32.9 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 32/116 (27%), Positives = 54/116 (46%)
Query: 19 YLPGALPQRS-PI-LSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLG 76
Y G LP RS P+ + P L + + G + A++D+ WG + G
Sbjct: 63 YSFGTLPWRSGPVEICPSSPILENALVGQYVITVATGSFHSGAVTDNGVAYMWGE-NSAG 121
Query: 77 QSYVTSGKHGEIPEPFPLP---TEAS------IVKAAAGWAHCVAVTEGGEVYTWG 123
Q V + ++ +PEP P+ +EAS I++ A G H +A++ E++ WG
Sbjct: 122 QCAVANQQY--VPEPNPVSIADSEASPLLAVRILQLACGEEHTLALSISREIWAWG 175
Score = 69 (29.3 bits), Expect = 0.00097, Sum P(3) = 0.00097
Identities = 20/59 (33%), Positives = 30/59 (50%)
Query: 89 PEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG---WK----ECVPSGRVFGDLSTG 140
PE P ++++AA G H V +TE GEVY++G W+ E PS + + G
Sbjct: 32 PERLPGWGGKTVLQAALGVKHGVLLTEDGEVYSFGTLPWRSGPVEICPSSPILENALVG 90
Score = 49 (22.3 bits), Expect = 0.00097, Sum P(3) = 0.00097
Identities = 11/17 (64%), Positives = 12/17 (70%)
Query: 221 VRIATVAAGGRHTLALS 237
VRI +A G HTLALS
Sbjct: 150 VRILQLACGEEHTLALS 166
>MGI|MGI:2179432 [details] [associations]
symbol:Mycbp2 "MYC binding protein 2" species:10090 "Mus
musculus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IMP] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0021785
"branchiomotor neuron axon guidance" evidence=IMP] [GO:0021952
"central nervous system projection neuron axonogenesis"
evidence=IMP] [GO:0030424 "axon" evidence=IDA] [GO:0032880
"regulation of protein localization" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0048667 "cell morphogenesis
involved in neuron differentiation" evidence=IMP] [GO:0051493
"regulation of cytoskeleton organization" evidence=IMP]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 UniPathway:UPA00143 MGI:MGI:2179432
INTERPRO:IPR000408 Pfam:PF00415 Prosite:PS00518 GO:GO:0005634
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0015630 GO:GO:0006355
GO:GO:0046872 GO:GO:0016874 GO:GO:0030424 GO:GO:0008270
GO:GO:0032880 GO:GO:0006351 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 CleanEx:MM_PAM
InterPro:IPR004939 PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194 KO:K10693
PANTHER:PTHR12846 CTD:23077 eggNOG:NOG240798 HOVERGEN:HBG053153
OrthoDB:EOG4VQ9NB ChiTaRS:MYCBP2 GO:GO:0021785 EMBL:AY325887
EMBL:BC059257 IPI:IPI00380409 IPI:IPI00608114 RefSeq:NP_997098.2
UniGene:Mm.6478 PDB:3GBW PDB:3HWJ PDBsum:3GBW PDBsum:3HWJ
ProteinModelPortal:Q7TPH6 SMR:Q7TPH6 IntAct:Q7TPH6 STRING:Q7TPH6
PhosphoSite:Q7TPH6 PaxDb:Q7TPH6 PRIDE:Q7TPH6 DNASU:105689
GeneID:105689 KEGG:mmu:105689 UCSC:uc007uwl.1 HOGENOM:HOG000112908
InParanoid:Q7TPH6 EvolutionaryTrace:Q7TPH6 NextBio:357830
CleanEx:MM_MYCBP2 Genevestigator:Q7TPH6
GermOnline:ENSMUSG00000033004 Uniprot:Q7TPH6
Length = 4711
Score = 113 (44.8 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 25/63 (39%), Positives = 38/63 (60%)
Query: 411 VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
VSCG H+ V+ ++G V+ +G+ ++GQLG GDV R P+ V + G + AC HT
Sbjct: 907 VSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTACSN-HT 965
Query: 470 LLL 472
+L
Sbjct: 966 AVL 968
Score = 71 (30.1 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
G++V +A G H+ V+ G + TFG GQCG+
Sbjct: 642 GHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGR 677
>ASPGD|ASPL0000040680 [details] [associations]
symbol:AN2874 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] INTERPRO:IPR000408 EMBL:BN001306 EMBL:AACD01000051
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
RefSeq:XP_660478.1 ProteinModelPortal:Q5B9A6
EnsemblFungi:CADANIAT00010215 GeneID:2873908 KEGG:ani:AN2874.2
Uniprot:Q5B9A6
Length = 1365
Score = 90 (36.7 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 25/91 (27%), Positives = 41/91 (45%)
Query: 389 DQAETLPRLLDAPSLE---NVHSKS---VSCGARHTAVIADDGKVFCWGWNKYGQLGLGD 442
D+ +P ++ P+ N H K VS G HT + + GK WG N + ++ +
Sbjct: 1271 DEGTQIPAIMKVPTFVPGINAHDKGIKMVSAGWTHTIAVTNGGKALGWGSNDHYEIHPDE 1330
Query: 443 VIDR-NIPSQVTIEGCVPRNVACGWWHTLLL 472
N P ++ +EG A G + T+LL
Sbjct: 1331 TKHPINDPMEIPMEGLRVVEAAAGRFFTILL 1361
Score = 84 (34.6 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 76 GQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
GQ + +G + +P +V+ AAG HC+A+T ++YTWG
Sbjct: 915 GQLGMGNGTPVQYKQPTKNTQLPDVVQVAAGGEHCIALTHDNKIYTWG 962
>UNIPROTKB|E2RSG1 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035023 "regulation of Rho protein signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005543 "phospholipid binding" evidence=IEA]
[GO:0005089 "Rho guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0005622 GO:GO:0005089 Gene3D:1.20.900.10 SUPFAM:SSF48065
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 GeneTree:ENSGT00600000084242 KO:K04575 OMA:AKPAIDF
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AAEX03018021
RefSeq:XP_003640234.1 Ensembl:ENSCAFT00000019642 GeneID:100856109
KEGG:cfa:100856109 Uniprot:E2RSG1
Length = 1656
Score = 123 (48.4 bits), Expect = 0.00075, P = 0.00075
Identities = 52/197 (26%), Positives = 81/197 (41%)
Query: 287 SVNSEG-PGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNC 345
SV E PG+ G V A G +H ++T+ G + +FG S E+ P+C
Sbjct: 29 SVTPERLPGWG--GKTVLQAALGVKHGVLLTEDGEVYSFG-----TLPWRSEPAEICPSC 81
Query: 346 V---SSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXXXDQAETLPRLL---- 398
++L+G + VA+G +H ++ G Y Q P +
Sbjct: 82 PILENALIGQFVVTVASGSFHNGAVTESGVAYMWGENSAGQCAVANQQYVPEPNPVSISD 141
Query: 399 -DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL-GDVIDRNIPSQVT-IE 455
+ SL V ++CG HT ++ ++ W W QLGL P +V +
Sbjct: 142 SETSSLLAVRILQLACGEEHTLALSISREI--WAWGTGCQLGLITTTFPVTKPQKVEHLA 199
Query: 456 GCVPRNVACGWWHTLLL 472
G V VACG +H+L L
Sbjct: 200 GRVVLQVACGAFHSLAL 216
Score = 97 (39.2 bits), Expect = 0.00039, Sum P(3) = 0.00039
Identities = 29/101 (28%), Positives = 45/101 (44%)
Query: 323 TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXX 382
T+G G GQ G G L P CV L G ++ + AG +H++ +++ VY+
Sbjct: 529 TWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIYLEAGGYHSLALTAKSQVYSWGSNTFG 588
Query: 383 XXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
D T+PRL S V S V+ G ++ + D
Sbjct: 589 QLGHY-DFPTTVPRLAKVSSENGVWS--VAAGQDYSLFLVD 626
Score = 73 (30.8 bits), Expect = 0.00039, Sum P(3) = 0.00039
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 82 SGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
+G + PE P ++++AA G H V +TE GEVY++G
Sbjct: 25 AGSYSVTPERLPGWGGKTVLQAALGVKHGVLLTEDGEVYSFG 66
Score = 49 (22.3 bits), Expect = 0.00039, Sum P(3) = 0.00039
Identities = 11/17 (64%), Positives = 12/17 (70%)
Query: 221 VRIATVAAGGRHTLALS 237
VRI +A G HTLALS
Sbjct: 150 VRILQLACGEEHTLALS 166
>UNIPROTKB|J3KQ33 [details] [associations]
symbol:ALS2 "Alsin" species:9606 "Homo sapiens" [GO:0001662
"behavioral fear response" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0001726 "ruffle"
evidence=IEA] [GO:0001881 "receptor recycling" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0007626
"locomotory behavior" evidence=IEA] [GO:0008104 "protein
localization" evidence=IEA] [GO:0008219 "cell death" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016050 "vesicle organization"
evidence=IEA] [GO:0016197 "endosomal transport" evidence=IEA]
[GO:0016601 "Rac protein signal transduction" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0030426 "growth cone" evidence=IEA] [GO:0032313
"regulation of Rab GTPase activity" evidence=IEA] [GO:0035249
"synaptic transmission, glutamatergic" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IEA] INTERPRO:IPR000408
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:AC007242
EMBL:AC007279 HGNC:HGNC:443 ChiTaRS:ALS2 PROSITE:PS50012
ProteinModelPortal:J3KQ33 Ensembl:ENST00000409632 Uniprot:J3KQ33
Length = 139
Score = 76 (31.8 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 18/49 (36%), Positives = 22/49 (44%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVS 347
G YV +A G HS +TD G +G GQC + PN VS
Sbjct: 90 GQYVITVATGSFHSGAVTDNGVAYMWGENSAGQCAVANQQYVPEPNPVS 138
Score = 69 (29.3 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 20/59 (33%), Positives = 30/59 (50%)
Query: 89 PEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG---WK----ECVPSGRVFGDLSTG 140
PE P ++++AA G H V +TE GEVY++G W+ E PS + + G
Sbjct: 32 PERLPGWGGKTVLQAALGVKHGVLLTEDGEVYSFGTLPWRSGPVEICPSSPILENALVG 90
>UNIPROTKB|F1RP77 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051493 "regulation of cytoskeleton organization"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0032880 "regulation of protein localization"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0021952 "central
nervous system projection neuron axonogenesis" evidence=IEA]
[GO:0021785 "branchiomotor neuron axon guidance" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872 GO:GO:0030424
GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
GO:GO:0021785 OMA:LLSILHW EMBL:CU457401 EMBL:CT978653 EMBL:CU041349
Ensembl:ENSSSCT00000010386 Uniprot:F1RP77
Length = 4460
Score = 124 (48.7 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 26/70 (37%), Positives = 38/70 (54%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
++CG HS V+ + G + TFG+G +GQ G G + P V +L G + V AG HT
Sbjct: 820 VSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQ-VTAGSNHT 878
Query: 365 ICISSDGDVY 374
+ DG V+
Sbjct: 879 AVLLMDGQVF 888
Score = 112 (44.5 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 24/62 (38%), Positives = 35/62 (56%)
Query: 411 VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTL 470
VSCG H+ V+ ++G V+ +G+ ++GQLG GDV R P+ V V G HT
Sbjct: 820 VSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTAGSNHTA 879
Query: 471 LL 472
+L
Sbjct: 880 VL 881
Score = 71 (30.1 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
G++V +A G H+ V+ G + TFG GQCG+
Sbjct: 555 GHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGR 590
Score = 58 (25.5 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 19/68 (27%), Positives = 31/68 (45%)
Query: 76 GQSYVTSGKHGEIPEPFPLPTEAS---IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGR 132
G+ Y+ GK + L T+ + + A G AH + + GEV+T+G GR
Sbjct: 532 GELYMF-GKDAIYSDSSSLVTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGR 590
Query: 133 VFGDLSTG 140
G ++ G
Sbjct: 591 DTGAMNQG 598
>UNIPROTKB|H0YD20 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS50012 PANTHER:PTHR22870:SF7
HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058 EMBL:AC124078
Ensembl:ENST00000532546 Bgee:H0YD20 Uniprot:H0YD20
Length = 126
Score = 96 (38.9 bits), Expect = 0.00042, P = 0.00042
Identities = 28/86 (32%), Positives = 40/86 (46%)
Query: 392 ETLPRLLDA--PS----LENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVID 445
+TLP A PS LEN + V G+ H+A + D G+V+ WG NK+GQL +
Sbjct: 8 QTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLA-NEAAF 66
Query: 446 RNIPSQVTIEGCVPRNVAC---GWWH 468
+P ++ V GW H
Sbjct: 67 LPVPQKIEAHCFQNEKVTAIWSGWTH 92
>UNIPROTKB|E1BX75 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005543 "phospholipid binding" evidence=IEA]
[GO:0001662 "behavioral fear response" evidence=IEA] [GO:0001726
"ruffle" evidence=IEA] [GO:0001881 "receptor recycling"
evidence=IEA] [GO:0005769 "early endosome" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0007626 "locomotory behavior" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] [GO:0014069
"postsynaptic density" evidence=IEA] [GO:0016050 "vesicle
organization" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=IEA] [GO:0017137 "Rab GTPase binding"
evidence=IEA] [GO:0030027 "lamellipodium" evidence=IEA] [GO:0030676
"Rac guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0031982 "vesicle" evidence=IEA] [GO:0032313 "regulation of Rab
GTPase activity" evidence=IEA] [GO:0032855 "positive regulation of
Rac GTPase activity" evidence=IEA] [GO:0035249 "synaptic
transmission, glutamatergic" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0043234 "protein
complex" evidence=IEA] [GO:0043539 "protein serine/threonine kinase
activator activity" evidence=IEA] [GO:0048812 "neuron projection
morphogenesis" evidence=IEA] [GO:0051036 "regulation of endosome
size" evidence=IEA] InterPro:IPR000219 InterPro:IPR001849
Pfam:PF00621 PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0014069 GO:GO:0008104
GO:GO:0006979 GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0043539 GO:GO:0016197 Gene3D:1.20.900.10 SUPFAM:SSF48065
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 GeneTree:ENSGT00600000084242 OMA:AKPAIDF
GO:GO:0005769 GO:GO:0017112 GO:GO:0030676 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AADN02019863
IPI:IPI00580588 Ensembl:ENSGALT00000013707 Uniprot:E1BX75
Length = 1651
Score = 125 (49.1 bits), Expect = 0.00045, P = 0.00045
Identities = 56/212 (26%), Positives = 89/212 (41%)
Query: 272 ESSYGKDRSAALS-RGSVNSEGPGFRVPGNYVKGI---ACGGRHSAVITDAGALLTFGWG 327
E+ K+R + R S P R+PG K + A G H ++T+ G + +FG
Sbjct: 10 EAEGAKERGLVYTWRAGSCSVTPE-RLPGLCGKTVLQAALGTNHGLLLTEGGEVYSFG-K 67
Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXXXXXXX 387
L + G SP ++LLG + VAAG +H ++ G VY
Sbjct: 68 LPWRSGPEEFCAN-SPILENTLLGQHVITVAAGSFHNGAVTEGGVVYMWGNNSSGQCAVA 126
Query: 388 XDQAETLPR---LLDAPS--LENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL-G 441
P+ + D+ + L +V ++CG HT ++ ++ W W QLGL
Sbjct: 127 NQPYVPEPQPISISDSETSPLLSVRVLQLACGEEHTLALSLSREI--WAWGSGCQLGLIT 184
Query: 442 DVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
P +V + G V +ACG +H+L L
Sbjct: 185 TTFPVTKPQKVEHLAGRVVLQIACGAYHSLAL 216
>UNIPROTKB|O75592 [details] [associations]
symbol:MYCBP2 "Probable E3 ubiquitin-protein ligase MYCBP2"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0015630 "microtubule cytoskeleton"
evidence=IEA] [GO:0021785 "branchiomotor neuron axon guidance"
evidence=IEA] [GO:0021952 "central nervous system projection neuron
axonogenesis" evidence=IEA] [GO:0030424 "axon" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0051493 "regulation of cytoskeleton organization" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
Prosite:PS00518 GO:GO:0005634 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0015630 GO:GO:0006355 GO:GO:0046872 GO:GO:0016874
GO:GO:0030424 GO:GO:0008270 GO:GO:0032880 GO:GO:0006351
GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0021952 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 CleanEx:HS_PAM InterPro:IPR004939
PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005 EMBL:AC001226
InterPro:IPR017868 EMBL:CH471093 PROSITE:PS50194 KO:K10693
PANTHER:PTHR12846 EMBL:AF075587 EMBL:AL159154 EMBL:AL159158
EMBL:AL359257 EMBL:AB020723 EMBL:BC037971 EMBL:AF083244
IPI:IPI00289776 IPI:IPI01014189 RefSeq:NP_055872.4
UniGene:Hs.591221 ProteinModelPortal:O75592 SMR:O75592
DIP:DIP-28142N IntAct:O75592 MINT:MINT-1632199 STRING:O75592
PhosphoSite:O75592 PaxDb:O75592 PRIDE:O75592
Ensembl:ENST00000357337 Ensembl:ENST00000544440 GeneID:23077
KEGG:hsa:23077 UCSC:uc010aev.3 CTD:23077 GeneCards:GC13M077618
HGNC:HGNC:23386 HPA:HPA039945 MIM:610392 neXtProt:NX_O75592
PharmGKB:PA134871126 eggNOG:NOG240798 HOVERGEN:HBG053153
InParanoid:O75592 OrthoDB:EOG4VQ9NB ChiTaRS:MYCBP2 GenomeRNAi:23077
NextBio:44191 ArrayExpress:O75592 Bgee:O75592 CleanEx:HS_MYCBP2
Genevestigator:O75592 GermOnline:ENSG00000005810 GO:GO:0021785
Uniprot:O75592
Length = 4640
Score = 124 (48.7 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 26/70 (37%), Positives = 38/70 (54%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
++CG HS V+ + G + TFG+G +GQ G G + P V +L G + V AG HT
Sbjct: 907 VSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQ-VTAGSNHT 965
Query: 365 ICISSDGDVY 374
+ DG V+
Sbjct: 966 AVLLMDGQVF 975
Score = 112 (44.5 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 24/62 (38%), Positives = 35/62 (56%)
Query: 411 VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTL 470
VSCG H+ V+ ++G V+ +G+ ++GQLG GDV R P+ V V G HT
Sbjct: 907 VSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTAGSNHTA 966
Query: 471 LL 472
+L
Sbjct: 967 VL 968
Score = 71 (30.1 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
G++V +A G H+ V+ G + TFG GQCG+
Sbjct: 642 GHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGR 677
Score = 58 (25.5 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 19/68 (27%), Positives = 31/68 (45%)
Query: 76 GQSYVTSGKHGEIPEPFPLPTEAS---IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGR 132
G+ Y+ GK + L T+ + + A G AH + + GEV+T+G GR
Sbjct: 619 GELYMF-GKDAIYSDSSSLVTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGR 677
Query: 133 VFGDLSTG 140
G ++ G
Sbjct: 678 DTGAMNQG 685
>UNIPROTKB|H0YE53 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 Ensembl:ENST00000533241 Uniprot:H0YE53
Length = 144
Score = 97 (39.2 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 35/94 (37%), Positives = 43/94 (45%)
Query: 74 DLGQSYVT-SGKHGEIPE-----PFPLPTEASIV---KAAA---GWAHCVAVTEGGEVYT 121
D G+ YV S KHG++ P P EA K A GW H VA TE G+++T
Sbjct: 2 DAGEVYVWGSNKHGQLANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFT 61
Query: 122 WGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFL 155
WG + GR L T G E+Q SFL
Sbjct: 62 WGRADYGQLGR---KLETYEGWK---LEKQDSFL 89
Score = 38 (18.4 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 411 VSCGARHT-AVIAD-DGKVF 428
VSCG+ H A+I GK +
Sbjct: 111 VSCGSEHNLAIIVSLQGKYY 130
>UNIPROTKB|J3KPZ3 [details] [associations]
symbol:MYCBP2 "Probable E3 ubiquitin-protein ligase MYCBP2"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872 GO:GO:0008270
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR014756 InterPro:IPR013083
SUPFAM:SSF81296 InterPro:IPR008979 SUPFAM:SSF49785 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 EMBL:AC001226 InterPro:IPR017868
PROSITE:PS50194 KO:K10693 PANTHER:PTHR12846 EMBL:AL159154
EMBL:AL159158 EMBL:AL359257 RefSeq:NP_055872.4 UniGene:Hs.591221
GeneID:23077 KEGG:hsa:23077 CTD:23077 HGNC:HGNC:23386
ChiTaRS:MYCBP2 OMA:LLSILHW ProteinModelPortal:J3KPZ3
Ensembl:ENST00000407578 Uniprot:J3KPZ3
Length = 4678
Score = 124 (48.7 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 26/70 (37%), Positives = 38/70 (54%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
++CG HS V+ + G + TFG+G +GQ G G + P V +L G + V AG HT
Sbjct: 945 VSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQ-VTAGSNHT 1003
Query: 365 ICISSDGDVY 374
+ DG V+
Sbjct: 1004 AVLLMDGQVF 1013
Score = 112 (44.5 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 24/62 (38%), Positives = 35/62 (56%)
Query: 411 VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTL 470
VSCG H+ V+ ++G V+ +G+ ++GQLG GDV R P+ V V G HT
Sbjct: 945 VSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTAGSNHTA 1004
Query: 471 LL 472
+L
Sbjct: 1005 VL 1006
Score = 71 (30.1 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
G++V +A G H+ V+ G + TFG GQCG+
Sbjct: 680 GHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGR 715
Score = 58 (25.5 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 19/68 (27%), Positives = 31/68 (45%)
Query: 76 GQSYVTSGKHGEIPEPFPLPTEAS---IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGR 132
G+ Y+ GK + L T+ + + A G AH + + GEV+T+G GR
Sbjct: 657 GELYMF-GKDAIYSDSSSLVTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGR 715
Query: 133 VFGDLSTG 140
G ++ G
Sbjct: 716 DTGAMNQG 723
>UNIPROTKB|F1MDF3 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051036 "regulation of endosome size" evidence=IEA]
[GO:0048812 "neuron projection morphogenesis" evidence=IEA]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=IEA] [GO:0032313 "regulation of Rab GTPase activity"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0017137 "Rab GTPase
binding" evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0016050 "vesicle organization" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0008104
"protein localization" evidence=IEA] [GO:0007626 "locomotory
behavior" evidence=IEA] [GO:0007528 "neuromuscular junction
development" evidence=IEA] [GO:0006979 "response to oxidative
stress" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005769 "early endosome"
evidence=IEA] [GO:0001881 "receptor recycling" evidence=IEA]
[GO:0001726 "ruffle" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0005543 "phospholipid binding"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005829 GO:GO:0005813 GO:GO:0043234
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 OMA:AKPAIDF GO:GO:0005769
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:DAAA02005594
EMBL:DAAA02005595 EMBL:DAAA02005596 IPI:IPI00905690
Ensembl:ENSBTAT00000060956 Uniprot:F1MDF3
Length = 1661
Score = 98 (39.6 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 29/101 (28%), Positives = 45/101 (44%)
Query: 323 TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAXXXXXXX 382
T+G G GQ G G L P CV L G ++ + AG +H++ +++ VY+
Sbjct: 534 TWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNTFG 593
Query: 383 XXXXXXDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
D T+PRL S V S V+ G ++ + D
Sbjct: 594 QLGHS-DFPTTVPRLAKVNSENGVWS--VAAGQDYSLFLVD 631
Score = 76 (31.8 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 33/117 (28%), Positives = 53/117 (45%)
Query: 17 WGYLPGALPQRSPIL-SPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDL 75
W P +PIL S LV + +TV + G A++DS + WG +
Sbjct: 75 WRSEPAETCPSNPILESALVGQYVVTVAT--------GSFHTGAVTDSGVVYMWGE-NSA 125
Query: 76 GQSYVTSGKHGEIPEPFPLP---TEAS------IVKAAAGWAHCVAVTEGGEVYTWG 123
GQ V + + +PEP P+ +E S I++ A G H +A++ E++ WG
Sbjct: 126 GQCAVANQPY--VPEPNPVSISDSETSPLLAVRILQLACGEEHTLALSLSREIWAWG 180
>UNIPROTKB|E1BH40 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051493 "regulation of cytoskeleton organization"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0032880 "regulation of protein localization"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0021952 "central
nervous system projection neuron axonogenesis" evidence=IEA]
[GO:0021785 "branchiomotor neuron axon guidance" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872 GO:GO:0030424
GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 KO:K10693
PANTHER:PTHR12846 CTD:23077 GO:GO:0021785 OMA:LLSILHW
EMBL:DAAA02033607 EMBL:DAAA02033608 EMBL:DAAA02033609
EMBL:DAAA02033610 IPI:IPI00705654 RefSeq:NP_001179746.1
UniGene:Bt.105085 Ensembl:ENSBTAT00000025100 GeneID:534496
KEGG:bta:534496 NextBio:20876421 Uniprot:E1BH40
Length = 4640
Score = 110 (43.8 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 24/62 (38%), Positives = 34/62 (54%)
Query: 411 VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTL 470
VSCG H+ V+ ++G V+ +G+ ++GQLG GDV R P+ V V G HT
Sbjct: 907 VSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTAGSNHTA 966
Query: 471 LL 472
L
Sbjct: 967 AL 968
Score = 71 (30.1 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
G++V +A G H+ V+ G + TFG GQCG+
Sbjct: 642 GHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGR 677
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.135 0.433 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 477 414 0.00081 118 3 11 22 0.42 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 213
No. of states in DFA: 621 (66 KB)
Total size of DFA: 269 KB (2139 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 29.70u 0.09s 29.79t Elapsed: 00:00:01
Total cpu time: 29.81u 0.09s 29.90t Elapsed: 00:00:01
Start: Sat May 11 12:44:46 2013 End: Sat May 11 12:44:47 2013
WARNINGS ISSUED: 1