BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 011775
         (477 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|255566472|ref|XP_002524221.1| Serine/threonine-protein kinase Nek8, putative [Ricinus communis]
 gi|223536498|gb|EEF38145.1| Serine/threonine-protein kinase Nek8, putative [Ricinus communis]
          Length = 476

 Score =  808 bits (2087), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 399/482 (82%), Positives = 433/482 (89%), Gaps = 13/482 (2%)

Query: 1   MNGEGQE----EKM--ERVVFMWGYLPGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGC 54
           MNGEG+E    E+M  E++VFMWGYLPGALPQRSPILSP+VVR     G +W+DVCGGGC
Sbjct: 1   MNGEGKEVMKMEEMVKEKLVFMWGYLPGALPQRSPILSPVVVR---ADGYSWKDVCGGGC 57

Query: 55  GFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVT 114
           GFAMAIS+S KLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASI+KAAAGWAHC+A T
Sbjct: 58  GFAMAISESGKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIMKAAAGWAHCIAAT 117

Query: 115 EGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSS 174
           + GEVYTWGWKEC+PSG+VFGD S   G +KDVFER S FLTEQVSPRSQ SRS+GG   
Sbjct: 118 DTGEVYTWGWKECIPSGKVFGDPSVAGGTEKDVFERHSPFLTEQVSPRSQSSRSTGGI-- 175

Query: 175 GTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTL 234
             DGRGSG+E +KRRRIS AKQ+AESSSSGDE LSA PCLVTLNPGVRI TVAAGGRHTL
Sbjct: 176 --DGRGSGDESTKRRRISSAKQSAESSSSGDETLSALPCLVTLNPGVRITTVAAGGRHTL 233

Query: 235 ALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPG 294
           ALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHP+PC++ SYGKDR A  SRG + SEG G
Sbjct: 234 ALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPVPCVDPSYGKDRPAPFSRGGMTSEGHG 293

Query: 295 FRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQI 354
           FRVPG+YVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSP CVS LLGI+I
Sbjct: 294 FRVPGSYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPICVSPLLGIRI 353

Query: 355 EGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
            GVAAGLWHTIC+S+DGDVYAFGGNQFGQLGTG DQAET PRLLDAPSLE++H+K VSCG
Sbjct: 354 AGVAAGLWHTICVSADGDVYAFGGNQFGQLGTGSDQAETTPRLLDAPSLEDIHAKVVSCG 413

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAV 474
           ARH+A++A+DGKVFCWGWNKYGQLGLGDVIDRNIPS VTIEGC+PRNVACGWWHTLLLA 
Sbjct: 414 ARHSAIVAEDGKVFCWGWNKYGQLGLGDVIDRNIPSPVTIEGCIPRNVACGWWHTLLLAE 473

Query: 475 PP 476
            P
Sbjct: 474 SP 475


>gi|356539897|ref|XP_003538429.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 480

 Score =  791 bits (2044), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/485 (80%), Positives = 437/485 (90%), Gaps = 13/485 (2%)

Query: 1   MNGEGQEE-------KMERVVFMWGYLPGALPQRSPILSPLVVRLPLTVGSAWRDVCGGG 53
           MNGEG E        + ER+V+MWGYLPGALPQR+P+L+P++VR+P + G +W+DVCGGG
Sbjct: 1   MNGEGSEAMQVEMEIEKERLVYMWGYLPGALPQRTPLLTPVLVRVPPS-GYSWKDVCGGG 59

Query: 54  CGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAV 113
           CGFAMAIS+  KLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTE +IVKAAAGWAHCV+V
Sbjct: 60  CGFAMAISEPGKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEVTIVKAAAGWAHCVSV 119

Query: 114 TEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTS 173
           T+ GEVYTWGW+ECVPSG+VFG+  TG   +KDV  RQSSFLTEQVSPRSQ S+S+GGT+
Sbjct: 120 TDCGEVYTWGWRECVPSGKVFGESLTGVSPEKDVPGRQSSFLTEQVSPRSQGSKSTGGTA 179

Query: 174 SGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHT 233
           SGT    SGEE SKRRR+S AKQTAE+SSS D+  +A PCLVTLNPGVRIA+VAAGGRHT
Sbjct: 180 SGT----SGEESSKRRRVSSAKQTAETSSSSDDTQTALPCLVTLNPGVRIASVAAGGRHT 235

Query: 234 LALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESS-YGKDRSAALSRGSVNSEG 292
           LALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPH +PCI SS YGKD SA+L+RGS++S+G
Sbjct: 236 LALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHLVPCINSSSYGKDISASLARGSMSSDG 295

Query: 293 PGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGI 352
             FRVPG+Y+KGIACGGRHSAVITDAGA+LTFGWGLYGQCGQGSTDDELSPNCVSSLLGI
Sbjct: 296 QNFRVPGSYIKGIACGGRHSAVITDAGAVLTFGWGLYGQCGQGSTDDELSPNCVSSLLGI 355

Query: 353 QIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVS 412
           +IEGVAAGLWHT+C S+DGDVYAFGGNQFGQLGTGGDQAET+PRLLD PSLENV+ K +S
Sbjct: 356 RIEGVAAGLWHTVCTSADGDVYAFGGNQFGQLGTGGDQAETIPRLLDCPSLENVNVKRIS 415

Query: 413 CGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           CGARHTA+I D+GKVFCWGWNKYGQLGLGDVIDRNIPS+VTIEGCV +NVACGWWHTLLL
Sbjct: 416 CGARHTALITDNGKVFCWGWNKYGQLGLGDVIDRNIPSEVTIEGCVAKNVACGWWHTLLL 475

Query: 473 AVPPT 477
           A PPT
Sbjct: 476 AEPPT 480


>gi|225449388|ref|XP_002282470.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Vitis
           vinifera]
          Length = 484

 Score =  791 bits (2043), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/486 (80%), Positives = 428/486 (88%), Gaps = 11/486 (2%)

Query: 1   MNGEGQ--------EEKMERVVFMWGYLPGALPQRSPILSPLVVRLPLTVGSAWRDVCGG 52
           MNGEG+        E   E++VFM GYLPGALPQRSP+LSP+ VR P ++  AWRDVCGG
Sbjct: 1   MNGEGKGPDEAVVMEGVREKLVFMMGYLPGALPQRSPLLSPIAVRSPASI-HAWRDVCGG 59

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
           GCGFAMAIS+S KLITWGSTDDLGQSYVTSGKHGE PEPFPLPTEASIVKAAAGWAHC +
Sbjct: 60  GCGFAMAISESGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPTEASIVKAAAGWAHCAS 119

Query: 113 VTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGT 172
           VTE GEVYTWGWKECVPSG+VFGD S G  L+KDVFERQSSFLTEQVSPR+Q SRS+ G 
Sbjct: 120 VTENGEVYTWGWKECVPSGKVFGDPSVGGSLEKDVFERQSSFLTEQVSPRTQGSRSTAGG 179

Query: 173 SSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRH 232
            SGTD +G GEE +KRRR+  +KQ AESSS GDE LSA PCLVTLNPGVRIA VAAGGRH
Sbjct: 180 VSGTDSKGGGEESTKRRRMLSSKQAAESSS-GDETLSALPCLVTLNPGVRIANVAAGGRH 238

Query: 233 TLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESS-YGKDRSAALSRGSVNSE 291
           TLALSD+GQVWGWGYGGEGQLGLGSRIRMVSSPHP+PC+ESS YGK+RS+AL+RG+V++E
Sbjct: 239 TLALSDVGQVWGWGYGGEGQLGLGSRIRMVSSPHPVPCVESSSYGKERSSALARGNVSTE 298

Query: 292 GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
           G   RVPG+YVK IACGGRHSAVITDAGALL FGWGLYGQCGQGSTDDELSP CVSSLLG
Sbjct: 299 GQSLRVPGSYVKWIACGGRHSAVITDAGALLMFGWGLYGQCGQGSTDDELSPTCVSSLLG 358

Query: 352 IQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSV 411
           IQIE VAAGLWHT+CIS+DGDVY FGGNQFGQLGTG DQ ETLPRLLDAPSLEN H+K V
Sbjct: 359 IQIERVAAGLWHTVCISADGDVYTFGGNQFGQLGTGVDQPETLPRLLDAPSLENAHAKIV 418

Query: 412 SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLL 471
           SCGARH+A+I  DGK+F WGWNKYGQLGLGDV+DRNIPSQVT++GC P+NVACGWWHTLL
Sbjct: 419 SCGARHSAIITADGKMFSWGWNKYGQLGLGDVVDRNIPSQVTLDGCTPKNVACGWWHTLL 478

Query: 472 LAVPPT 477
           LA  PT
Sbjct: 479 LAESPT 484


>gi|296086178|emb|CBI31619.3| unnamed protein product [Vitis vinifera]
          Length = 461

 Score =  778 bits (2009), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/463 (82%), Positives = 416/463 (89%), Gaps = 3/463 (0%)

Query: 16  MWGYLPGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDL 75
           M GYLPGALPQRSP+LSP+ VR P ++  AWRDVCGGGCGFAMAIS+S KLITWGSTDDL
Sbjct: 1   MMGYLPGALPQRSPLLSPIAVRSPASI-HAWRDVCGGGCGFAMAISESGKLITWGSTDDL 59

Query: 76  GQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFG 135
           GQSYVTSGKHGE PEPFPLPTEASIVKAAAGWAHC +VTE GEVYTWGWKECVPSG+VFG
Sbjct: 60  GQSYVTSGKHGETPEPFPLPTEASIVKAAAGWAHCASVTENGEVYTWGWKECVPSGKVFG 119

Query: 136 DLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAK 195
           D S G  L+KDVFERQSSFLTEQVSPR+Q SRS+ G  SGTD +G GEE +KRRR+  +K
Sbjct: 120 DPSVGGSLEKDVFERQSSFLTEQVSPRTQGSRSTAGGVSGTDSKGGGEESTKRRRMLSSK 179

Query: 196 QTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGL 255
           Q AESSS GDE LSA PCLVTLNPGVRIA VAAGGRHTLALSD+GQVWGWGYGGEGQLGL
Sbjct: 180 QAAESSS-GDETLSALPCLVTLNPGVRIANVAAGGRHTLALSDVGQVWGWGYGGEGQLGL 238

Query: 256 GSRIRMVSSPHPIPCIESS-YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAV 314
           GSRIRMVSSPHP+PC+ESS YGK+RS+AL+RG+V++EG   RVPG+YVK IACGGRHSAV
Sbjct: 239 GSRIRMVSSPHPVPCVESSSYGKERSSALARGNVSTEGQSLRVPGSYVKWIACGGRHSAV 298

Query: 315 ITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVY 374
           ITDAGALL FGWGLYGQCGQGSTDDELSP CVSSLLGIQIE VAAGLWHT+CIS+DGDVY
Sbjct: 299 ITDAGALLMFGWGLYGQCGQGSTDDELSPTCVSSLLGIQIERVAAGLWHTVCISADGDVY 358

Query: 375 AFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNK 434
            FGGNQFGQLGTG DQ ETLPRLLDAPSLEN H+K VSCGARH+A+I  DGK+F WGWNK
Sbjct: 359 TFGGNQFGQLGTGVDQPETLPRLLDAPSLENAHAKIVSCGARHSAIITADGKMFSWGWNK 418

Query: 435 YGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAVPPT 477
           YGQLGLGDV+DRNIPSQVT++GC P+NVACGWWHTLLLA  PT
Sbjct: 419 YGQLGLGDVVDRNIPSQVTLDGCTPKNVACGWWHTLLLAESPT 461


>gi|356569137|ref|XP_003552762.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Glycine max]
          Length = 472

 Score =  775 bits (2001), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/481 (80%), Positives = 429/481 (89%), Gaps = 13/481 (2%)

Query: 1   MNGEGQEE---KMERVVFMWGYLPGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFA 57
           MNGEG E    + E +V+MWGYLPGALPQR+P+L+PL+VR+P + G  W+DVCGGGCGFA
Sbjct: 1   MNGEGSEAMQVEKESLVYMWGYLPGALPQRTPLLTPLLVRVPPS-GYFWKDVCGGGCGFA 59

Query: 58  MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGG 117
           MAIS+  KLITWGSTDDLGQSYVTSGKHGE PEPFPLPTE +IVKAAAGWAHCV+VT+ G
Sbjct: 60  MAISEPGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPTEVTIVKAAAGWAHCVSVTDCG 119

Query: 118 EVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTD 177
           EVYTWGW+ECVPSG+VFG+  TG   +KDV  RQSSFLTEQVSPRSQ S+S+GGT+SGT 
Sbjct: 120 EVYTWGWRECVPSGKVFGESLTGVSPEKDVPRRQSSFLTEQVSPRSQGSKSTGGTASGT- 178

Query: 178 GRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS 237
              SGEE SKRRR+S AKQTAE+SSS D+  +A PCLVTLNPGVRIA+VAAGGRHTLALS
Sbjct: 179 ---SGEESSKRRRVSSAKQTAETSSSSDDTQTALPCLVTLNPGVRIASVAAGGRHTLALS 235

Query: 238 DIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESS-YGKDRSAALSRGSVNSEGPGFR 296
           DIGQVWGWGYGGEGQLGLGSRIRMVSSPH +PCI SS YGKD    ++R S++S+G  FR
Sbjct: 236 DIGQVWGWGYGGEGQLGLGSRIRMVSSPHLVPCINSSSYGKD----MARVSISSDGQNFR 291

Query: 297 VPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG 356
           VPG+Y+KGIACGGRHSAVITDAGA+LTFGWGLYGQCGQGSTDDELSP+CVSSLLGIQIEG
Sbjct: 292 VPGSYIKGIACGGRHSAVITDAGAVLTFGWGLYGQCGQGSTDDELSPSCVSSLLGIQIEG 351

Query: 357 VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR 416
           VAAGLWHT+C S DGDVYAFGGNQFGQLGTGGDQAET+PRLLD PSLENV+ K +SCGAR
Sbjct: 352 VAAGLWHTVCTSVDGDVYAFGGNQFGQLGTGGDQAETIPRLLDCPSLENVNVKRISCGAR 411

Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAVPP 476
           HTA+IAD+GKVFCWGWNKYGQLGLGDVIDRNIPS+VTIEGCV +NVACGWWHTLLLA  P
Sbjct: 412 HTALIADNGKVFCWGWNKYGQLGLGDVIDRNIPSEVTIEGCVAKNVACGWWHTLLLAESP 471

Query: 477 T 477
           T
Sbjct: 472 T 472


>gi|356501083|ref|XP_003519358.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 477

 Score =  751 bits (1940), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/474 (78%), Positives = 422/474 (89%), Gaps = 7/474 (1%)

Query: 2   NGEGQEE-KMERVVFMWGYLPGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAI 60
           NG+G +   ++RV++MWGYLPGALPQR+P+L+P+ VR+P     +W DVCGGGCGFA+AI
Sbjct: 5   NGDGTDGGALQRVLYMWGYLPGALPQRTPLLTPVAVRVP-PCDYSWNDVCGGGCGFAIAI 63

Query: 61  SDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVY 120
           S+S KLITWGSTDDLGQSYVTSGKHGE PEPFPLPTE SIVKAAAGWAHCVAVTE GEVY
Sbjct: 64  SESGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPTETSIVKAAAGWAHCVAVTEHGEVY 123

Query: 121 TWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRG 180
           TWGWKEC+PSG+VFG+ STG  L+KDV  R +   TEQVSPRSQ SRS+GGT+S      
Sbjct: 124 TWGWKECIPSGKVFGESSTGVSLEKDVPGRHTPLFTEQVSPRSQGSRSTGGTASSN---- 179

Query: 181 SGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIG 240
           SGEE +KRRR+S AKQTAESSSS D++L+AFPCLVTLNPG+RIA+VAAGGRHTLALSD G
Sbjct: 180 SGEESTKRRRVSSAKQTAESSSSSDDSLTAFPCLVTLNPGIRIASVAAGGRHTLALSDTG 239

Query: 241 QVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYG-KDRSAALSRGSVNSEGPGFRVPG 299
            VW WGYGGEGQLGLGSRIRMVS+PH +PCI+SSY  KDRSA L+RG++ SEG  FR+PG
Sbjct: 240 LVWAWGYGGEGQLGLGSRIRMVSTPHLVPCIDSSYYVKDRSATLARGNMGSEGQTFRIPG 299

Query: 300 NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAA 359
           +Y+K IACGGRHSAVITDAGALLTFGWGLYGQCGQG TDDELSP CVSSLLGI IEG+AA
Sbjct: 300 SYIKRIACGGRHSAVITDAGALLTFGWGLYGQCGQGITDDELSPTCVSSLLGIHIEGIAA 359

Query: 360 GLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
           GLWHT+C S+DGDVYAFGGNQFGQLGTG DQAETLPRL+D+PSL+N+H+K++SCGARHTA
Sbjct: 360 GLWHTVCTSADGDVYAFGGNQFGQLGTGADQAETLPRLVDSPSLKNLHAKNISCGARHTA 419

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           ++ + GKVFCWGWNKYGQLGLGDVIDRNIPS+VTIEGCVP+NVACGWWHTLLLA
Sbjct: 420 LVTEGGKVFCWGWNKYGQLGLGDVIDRNIPSEVTIEGCVPKNVACGWWHTLLLA 473


>gi|356551654|ref|XP_003544189.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 477

 Score =  748 bits (1931), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/478 (78%), Positives = 420/478 (87%), Gaps = 7/478 (1%)

Query: 2   NGEGQEE-KMERVVFMWGYLPGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAI 60
           NG G EE  ++ V++MWGYLPGALPQR+P+L+P+ VR+P     +W DVCGGGCGFA+AI
Sbjct: 5   NGGGSEEGALQTVLYMWGYLPGALPQRTPLLTPVAVRVP-PCDYSWNDVCGGGCGFAIAI 63

Query: 61  SDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVY 120
           S+S KLITWGSTDDLGQSYVTSGKHGE PEPFPLPTEASIVKAAAGWAHCVAVTE G VY
Sbjct: 64  SESGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPTEASIVKAAAGWAHCVAVTEHGAVY 123

Query: 121 TWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRG 180
           TWGWKEC+PSGRVFG+ STG  L+KDV  R S   TEQVSPRSQ SRS+GGT+S      
Sbjct: 124 TWGWKECIPSGRVFGEPSTGVSLEKDVPGRHSQVSTEQVSPRSQGSRSTGGTASSN---- 179

Query: 181 SGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIG 240
           SGEE +KRRR+S AKQTAESSSS D++L+AFPCLVTLNPG+RIA+VAAGGRHTLALSD G
Sbjct: 180 SGEESTKRRRVSSAKQTAESSSSSDDSLTAFPCLVTLNPGIRIASVAAGGRHTLALSDTG 239

Query: 241 QVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSY-GKDRSAALSRGSVNSEGPGFRVPG 299
            VW WGYGGEGQLGLGSRIRMVS+PH +PCI+SSY  KDRSA L+RG+++SEG  FRVPG
Sbjct: 240 LVWAWGYGGEGQLGLGSRIRMVSTPHLVPCIDSSYYSKDRSATLARGNMDSEGQTFRVPG 299

Query: 300 NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAA 359
           +Y+K IACGGRHSAVITDAGALLTFGWGLYGQCGQG TDDELSP CVSS+LGI IE VAA
Sbjct: 300 SYIKRIACGGRHSAVITDAGALLTFGWGLYGQCGQGITDDELSPTCVSSILGIHIERVAA 359

Query: 360 GLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
           GLWHT+C S+DGDVYAFG NQFGQLGTG DQAETLPRLLD+PSL+N+ +K++SCGARHTA
Sbjct: 360 GLWHTVCTSADGDVYAFGENQFGQLGTGADQAETLPRLLDSPSLDNLRAKNISCGARHTA 419

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAVPPT 477
           ++ + GKVFCWGWNKYGQLGLGDVIDRNIPS+V IEGCVP+NVACGWWHTLLLA  PT
Sbjct: 420 LVTEGGKVFCWGWNKYGQLGLGDVIDRNIPSEVIIEGCVPKNVACGWWHTLLLAESPT 477


>gi|449465846|ref|XP_004150638.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
 gi|449516435|ref|XP_004165252.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
          Length = 491

 Score =  748 bits (1930), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/492 (76%), Positives = 421/492 (85%), Gaps = 16/492 (3%)

Query: 1   MNGEG-----------QEEKMERVVFMWGYLPGALPQRSPILSPLVVRLP---LTVGSAW 46
           MNGEG           ++ K  ++VFMWGYLPGALPQRSP+LSP+VVRLP    T    W
Sbjct: 1   MNGEGSRGEDEIVGMEEDVKDNKIVFMWGYLPGALPQRSPLLSPVVVRLPGKDATDAHGW 60

Query: 47  RDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAG 106
           RDVCGGGCGFA+AIS + KLITWG+TDDLGQSYVTSGKHGE PEPFPLPTEASIVKAAAG
Sbjct: 61  RDVCGGGCGFAVAISANGKLITWGATDDLGQSYVTSGKHGETPEPFPLPTEASIVKAAAG 120

Query: 107 WAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVS 166
           WAH VA+T+ GEVYTWGWKECVPSG++F DLS G   ++DV ERQSS + +QVSPR Q S
Sbjct: 121 WAHTVAITDRGEVYTWGWKECVPSGKMFTDLSAGAAYERDVLERQSSSVIDQVSPRLQAS 180

Query: 167 RSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATV 226
           RSSG  SS  + R  G E +KRRR+S AK  AESSSS DE LSA PCLVTLNPGVRI +V
Sbjct: 181 RSSGVVSS-IEARAGGAESTKRRRVSSAKLAAESSSSSDETLSAVPCLVTLNPGVRITSV 239

Query: 227 AAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESS-YGKDRSAALSR 285
           +AGGRHTLALSD+GQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESS +GKDRSAAL+R
Sbjct: 240 SAGGRHTLALSDMGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSSFGKDRSAALAR 299

Query: 286 GSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNC 345
           GS + EG G R+PG+YVKGIACGGRHSA +TDAGALLTFGWGLYGQCGQG TDDELSP C
Sbjct: 300 GSASLEGQGSRIPGSYVKGIACGGRHSAAVTDAGALLTFGWGLYGQCGQGCTDDELSPTC 359

Query: 346 VSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLEN 405
           VSSLLGI+IE VAAGLWHT+CISSDGD+Y+FGGNQFGQLGTG DQAETLPRLLDAPS+EN
Sbjct: 360 VSSLLGIRIESVAAGLWHTVCISSDGDIYSFGGNQFGQLGTGADQAETLPRLLDAPSVEN 419

Query: 406 VHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACG 465
           V++K VSCGARH+A++++DGKVFCWGWNKYGQLGLGDVIDRNIP +V +E C  +NVACG
Sbjct: 420 VNAKVVSCGARHSAIVSEDGKVFCWGWNKYGQLGLGDVIDRNIPVEVPMENCNSKNVACG 479

Query: 466 WWHTLLLAVPPT 477
           WWHTLLLA  PT
Sbjct: 480 WWHTLLLAESPT 491


>gi|356569139|ref|XP_003552763.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Glycine max]
          Length = 459

 Score =  744 bits (1922), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/481 (77%), Positives = 417/481 (86%), Gaps = 26/481 (5%)

Query: 1   MNGEGQEE---KMERVVFMWGYLPGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFA 57
           MNGEG E    + E +V+MWGYLPGALPQR+P+L+PL+VR+P + G  W+DVCGGGCGFA
Sbjct: 1   MNGEGSEAMQVEKESLVYMWGYLPGALPQRTPLLTPLLVRVPPS-GYFWKDVCGGGCGFA 59

Query: 58  MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGG 117
           MAIS+  KLITWGSTDDLGQSYVTSGKHGE PEPFPLPTE +IVKAAAGWAHCV+VT+ G
Sbjct: 60  MAISEPGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPTEVTIVKAAAGWAHCVSVTDCG 119

Query: 118 EVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTD 177
           EVYTWGW+ECVPSG+VFG+  TG   +KDV             PR Q S+S+GGT+SGT 
Sbjct: 120 EVYTWGWRECVPSGKVFGESLTGVSPEKDV-------------PRRQSSKSTGGTASGT- 165

Query: 178 GRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS 237
              SGEE SKRRR+S AKQTAE+SSS D+  +A PCLVTLNPGVRIA+VAAGGRHTLALS
Sbjct: 166 ---SGEESSKRRRVSSAKQTAETSSSSDDTQTALPCLVTLNPGVRIASVAAGGRHTLALS 222

Query: 238 DIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESS-YGKDRSAALSRGSVNSEGPGFR 296
           DIGQVWGWGYGGEGQLGLGSRIRMVSSPH +PCI SS YGKD    ++R S++S+G  FR
Sbjct: 223 DIGQVWGWGYGGEGQLGLGSRIRMVSSPHLVPCINSSSYGKD----MARVSISSDGQNFR 278

Query: 297 VPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG 356
           VPG+Y+KGIACGGRHSAVITDAGA+LTFGWGLYGQCGQGSTDDELSP+CVSSLLGIQIEG
Sbjct: 279 VPGSYIKGIACGGRHSAVITDAGAVLTFGWGLYGQCGQGSTDDELSPSCVSSLLGIQIEG 338

Query: 357 VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR 416
           VAAGLWHT+C S DGDVYAFGGNQFGQLGTGGDQAET+PRLLD PSLENV+ K +SCGAR
Sbjct: 339 VAAGLWHTVCTSVDGDVYAFGGNQFGQLGTGGDQAETIPRLLDCPSLENVNVKRISCGAR 398

Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAVPP 476
           HTA+IAD+GKVFCWGWNKYGQLGLGDVIDRNIPS+VTIEGCV +NVACGWWHTLLLA  P
Sbjct: 399 HTALIADNGKVFCWGWNKYGQLGLGDVIDRNIPSEVTIEGCVAKNVACGWWHTLLLAESP 458

Query: 477 T 477
           T
Sbjct: 459 T 459


>gi|357460949|ref|XP_003600756.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355489804|gb|AES71007.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 464

 Score =  736 bits (1899), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/478 (75%), Positives = 411/478 (85%), Gaps = 15/478 (3%)

Query: 1   MNGEGQEEKMERVVFMWGYLPGALPQRSPILSPLVVRLPLTVGS-AWRDVCGGGCGFAMA 59
           MNG G E K E++V+MWGYLPGALPQR+P+L+P++VR+P T G   W+DV GGGCGFAMA
Sbjct: 1   MNGGGCEVK-EKMVYMWGYLPGALPQRTPLLTPVLVRVPATSGGYNWKDVSGGGCGFAMA 59

Query: 60  ISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEV 119
           IS+S KLITWGSTDDLGQSYVTSGKHGE PEPF LP E SIVKAA+ WAHCVA T+ GEV
Sbjct: 60  ISESGKLITWGSTDDLGQSYVTSGKHGETPEPFSLPNEVSIVKAASAWAHCVAATDCGEV 119

Query: 120 YTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGR 179
           YTWGWKEC+PSG+VFG+ S G   +KD   + SSFLTEQVS RSQVS+S+GGT S     
Sbjct: 120 YTWGWKECIPSGKVFGETSQGVSPEKDAQGKPSSFLTEQVSSRSQVSKSTGGTVS----- 174

Query: 180 GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDI 239
            SGEE SKRR++S AKQ A++SSSGD+ L+A PCLVTLNPGV+I +VAAGGRHTL LSDI
Sbjct: 175 -SGEESSKRRKVSSAKQAAQTSSSGDDILTAMPCLVTLNPGVKITSVAAGGRHTLVLSDI 233

Query: 240 GQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPG 299
           GQVWGWGYGGEGQLGLGSR+RMVSSPH IPCI+SS       +L +GS++SEG  FR+PG
Sbjct: 234 GQVWGWGYGGEGQLGLGSRVRMVSSPHIIPCIDSS-------SLVQGSMSSEGHNFRIPG 286

Query: 300 NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAA 359
           + +K IACGGRHSAVITDAGA+L FGWGLYGQCGQGSTDDELSP CVSSLLGIQIEGVAA
Sbjct: 287 SCIKAIACGGRHSAVITDAGAVLAFGWGLYGQCGQGSTDDELSPTCVSSLLGIQIEGVAA 346

Query: 360 GLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
           GLWHT+C S+DGDVYAFGGNQFGQLGTG DQAETLPRLLD PSLENV+ K++SCGARHTA
Sbjct: 347 GLWHTVCTSADGDVYAFGGNQFGQLGTGSDQAETLPRLLDCPSLENVNVKTISCGARHTA 406

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAVPPT 477
           ++ D+GKVF WGWNKYGQLGLGDVIDRNIPS+V IEGC+ +NVACGWWHTLLLA  PT
Sbjct: 407 LVTDNGKVFSWGWNKYGQLGLGDVIDRNIPSEVAIEGCIAKNVACGWWHTLLLAESPT 464


>gi|297816858|ref|XP_002876312.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297322150|gb|EFH52571.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 482

 Score =  687 bits (1773), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 344/471 (73%), Positives = 392/471 (83%), Gaps = 14/471 (2%)

Query: 4   EGQEEKMERVVFMWGYLPGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDS 63
           E +E   +R+V+MWGYLPGA  QRSP++SP+ V++P  V S+W+DV GGGCGFAMA ++S
Sbjct: 19  EEEEVVGQRLVYMWGYLPGASQQRSPLMSPVEVKIPPAVESSWKDVSGGGCGFAMATAES 78

Query: 64  RKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
            KLITWGSTDDLGQSYVTSGKHGE PEPFPLP E  + KA AGWAHCVAVTE  EVYTWG
Sbjct: 79  GKLITWGSTDDLGQSYVTSGKHGETPEPFPLPPEVCVQKAEAGWAHCVAVTENQEVYTWG 138

Query: 124 WKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGE 183
           W+EC+P+GRVFG        D D  ER  SF TEQVSP  Q  +SSGGTS   + RG   
Sbjct: 139 WRECIPTGRVFGQA------DGDSCERNISFSTEQVSPTCQGRKSSGGTSYQVEARG--- 189

Query: 184 EGSKRRRISLAKQTAESSSSGDE-NLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQV 242
           E +K+RRIS +KQ AE++S  D  +LSA PCLV+L PGVRI +VAAGGRHTLALSDIGQV
Sbjct: 190 EPTKKRRISPSKQAAENASQSDNIDLSALPCLVSLAPGVRIVSVAAGGRHTLALSDIGQV 249

Query: 243 WGWGYGGEGQLGLGSRIRMVSSPHPIPCIE-SSYGKDRSAALSRGSVNSEGPGFRVPGNY 301
           WGWGYGGEGQLGLGSR+R+VSSPHPIPCIE SSYGK  S+ ++   ++SE    RV G+Y
Sbjct: 250 WGWGYGGEGQLGLGSRVRLVSSPHPIPCIEPSSYGKATSSGVN---MSSEVQCARVLGSY 306

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           VK IACGGRHSAVITD GALLTFGWGLYGQCGQGSTDDELSP CVSSLLGI+IE VAAGL
Sbjct: 307 VKKIACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIRIEEVAAGL 366

Query: 362 WHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
           WHTIC S+DGDVY+FGGNQFGQLGTG DQAETLP+LL+AP+LENV+ K +SCGARHTAVI
Sbjct: 367 WHTICASADGDVYSFGGNQFGQLGTGCDQAETLPKLLEAPNLENVNVKIISCGARHTAVI 426

Query: 422 ADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           AD+GKVFCWGWNKYGQLGLGDVIDRN PS+V I+ CVP+N+ACGWWHTLLL
Sbjct: 427 ADEGKVFCWGWNKYGQLGLGDVIDRNAPSEVRIKDCVPKNIACGWWHTLLL 477


>gi|15233306|ref|NP_191117.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|7076801|emb|CAB75916.1| Regulator of chromosome condensation-like protein [Arabidopsis
           thaliana]
 gi|332645883|gb|AEE79404.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 488

 Score =  679 bits (1752), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/467 (73%), Positives = 392/467 (83%), Gaps = 12/467 (2%)

Query: 11  ERVVFMWGYLPGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWG 70
           +RVV+MWGYLPGA PQRSP++SP+ V++P  V S+W+DV GGGCGFAMA ++S KLITWG
Sbjct: 30  QRVVYMWGYLPGASPQRSPLMSPVEVKIPPAVESSWKDVSGGGCGFAMATAESGKLITWG 89

Query: 71  STDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPS 130
           STDDLGQSYVTSGKHGE PEPFPLP E  + KA AGWAHCVAVTE  +VYTWGW+EC+P+
Sbjct: 90  STDDLGQSYVTSGKHGETPEPFPLPPEVCVQKAEAGWAHCVAVTENQQVYTWGWRECIPT 149

Query: 131 GRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRR 190
           GRVFG +      D D  ER  SF TEQVS  SQ  +SSGGTSS  +GRG GE  +K+RR
Sbjct: 150 GRVFGQV------DGDSCERNISFSTEQVSSSSQGKKSSGGTSSQVEGRGGGEP-TKKRR 202

Query: 191 ISLAKQTAESSSSGDE-NLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGG 249
           IS +KQ AE+SS  D  +LSA PCLV+L PGVRI +VAAGGRHTLALSDIGQVWGWGYGG
Sbjct: 203 ISPSKQAAENSSQSDNIDLSALPCLVSLAPGVRIVSVAAGGRHTLALSDIGQVWGWGYGG 262

Query: 250 EGQLGLGSRIRMVSSPHPIPCIE-SSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACG 308
           EGQLGLGSR+R+VSSPHPIPCIE SSYGK  S+ ++  SV   G   RV G+YVK IACG
Sbjct: 263 EGQLGLGSRVRLVSSPHPIPCIEPSSYGKATSSGVNMSSVVQCG---RVLGSYVKKIACG 319

Query: 309 GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICIS 368
           GRHSAVITD GALLTFGWGLYGQCGQGSTDDELSP CVSSLLGI+IE VAAGLWHT C S
Sbjct: 320 GRHSAVITDTGALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIRIEEVAAGLWHTTCAS 379

Query: 369 SDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVF 428
           SDGDVYAFGGNQFGQLGTG DQAETLP+LL+AP+LENV+ K++SCGARHTAVI D+G+VF
Sbjct: 380 SDGDVYAFGGNQFGQLGTGCDQAETLPKLLEAPNLENVNVKTISCGARHTAVITDEGRVF 439

Query: 429 CWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAVP 475
           CWGWNKYGQLG+GDVIDRN P++V I+ C P+N+ACGWWHTLLL  P
Sbjct: 440 CWGWNKYGQLGIGDVIDRNAPAEVRIKDCFPKNIACGWWHTLLLGQP 486


>gi|110740523|dbj|BAE98367.1| regulator of chromosome condensation-like protein [Arabidopsis
           thaliana]
          Length = 488

 Score =  676 bits (1744), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 344/467 (73%), Positives = 391/467 (83%), Gaps = 12/467 (2%)

Query: 11  ERVVFMWGYLPGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWG 70
           +RVV+MWGYLPGA PQRSP++SP+ V++P  V S+W+DV GGGCGFAMA ++S KLITWG
Sbjct: 30  QRVVYMWGYLPGASPQRSPLMSPVEVKIPPAVESSWKDVSGGGCGFAMATAESGKLITWG 89

Query: 71  STDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPS 130
           STDDLGQSYVTSGKHGE PEPFPLP E  + KA AGWAHCVAVTE  +VYTWGW+EC+P+
Sbjct: 90  STDDLGQSYVTSGKHGETPEPFPLPPEVCVQKAEAGWAHCVAVTENQQVYTWGWRECIPT 149

Query: 131 GRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRR 190
           GRVF  +      D D  ER  SF TEQVS  SQ  +SSGGTSS  +GRG GE  +K+RR
Sbjct: 150 GRVFRQV------DGDSCERNISFSTEQVSSSSQGKKSSGGTSSQVEGRGGGEP-TKKRR 202

Query: 191 ISLAKQTAESSSSGDE-NLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGG 249
           IS +KQ AE+SS  D  +LSA PCLV+L PGVRI +VAAGGRHTLALSDIGQVWGWGYGG
Sbjct: 203 ISPSKQAAENSSQSDNIDLSALPCLVSLAPGVRIVSVAAGGRHTLALSDIGQVWGWGYGG 262

Query: 250 EGQLGLGSRIRMVSSPHPIPCIE-SSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACG 308
           EGQLGLGSR+R+VSSPHPIPCIE SSYGK  S+ ++  SV   G   RV G+YVK IACG
Sbjct: 263 EGQLGLGSRVRLVSSPHPIPCIEPSSYGKATSSGVNMSSVVQCG---RVLGSYVKKIACG 319

Query: 309 GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICIS 368
           GRHSAVITD GALLTFGWGLYGQCGQGSTDDELSP CVSSLLGI+IE VAAGLWHT C S
Sbjct: 320 GRHSAVITDTGALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIRIEEVAAGLWHTTCAS 379

Query: 369 SDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVF 428
           SDGDVYAFGGNQFGQLGTG DQAETLP+LL+AP+LENV+ K++SCGARHTAVI D+G+VF
Sbjct: 380 SDGDVYAFGGNQFGQLGTGCDQAETLPKLLEAPNLENVNVKTISCGARHTAVITDEGRVF 439

Query: 429 CWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAVP 475
           CWGWNKYGQLG+GDVIDRN P++V I+ C P+N+ACGWWHTLLL  P
Sbjct: 440 CWGWNKYGQLGIGDVIDRNAPAEVRIKDCFPKNIACGWWHTLLLGQP 486


>gi|326533000|dbj|BAJ89345.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 500

 Score =  664 bits (1713), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/475 (68%), Positives = 393/475 (82%), Gaps = 7/475 (1%)

Query: 6   QEEKMERVVFMWGYLPGALPQRSPILSPLVVRLP-LTVGSAWRDVCGGGCGFAMAISDSR 64
           +E    +VV MWGYLPG  PQRSP+L P+ VRLP    G AWRDVCGGGCGFAMAIS+S 
Sbjct: 30  EEAGKGQVVLMWGYLPGVSPQRSPLLGPVPVRLPPAAAGDAWRDVCGGGCGFAMAISESG 89

Query: 65  KLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGW 124
           KL+TWGSTDD+GQSYVT+GKH E PE FPLP++ +I +A AGWAHCVA+T+ G VYTWGW
Sbjct: 90  KLLTWGSTDDMGQSYVTAGKHEETPEAFPLPSDVAIARADAGWAHCVAITDEGVVYTWGW 149

Query: 125 KECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSG-TDGRGSGE 183
           KECVP+GRV  D ++   L+KD  ERQS+   +QVSPRSQVSR+S G +SG ++ RG+ E
Sbjct: 150 KECVPTGRVIADQASVGTLEKD--ERQSASANDQVSPRSQVSRTSSGAASGPSESRGT-E 206

Query: 184 EGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVW 243
           + +KRRR+S AKQ  +SS+SGDENLSA PC+VT N GV+I  VAAGGRHTLALSD GQVW
Sbjct: 207 DSTKRRRLSSAKQGNDSSTSGDENLSAPPCVVTFNTGVKITAVAAGGRHTLALSDFGQVW 266

Query: 244 GWGYGGEGQLGLGSRIRMVSSPHPIPCIES-SYGKDRSAALSRGSVNSEGPGFRVPGNYV 302
           GWGYGGEGQLGLGSRIR VSSPH IPCIES SY KDR +A+ +G+ N+EG   +V G+ V
Sbjct: 267 GWGYGGEGQLGLGSRIRTVSSPHTIPCIESASYSKDRPSAM-KGNKNAEGQINKVMGSRV 325

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
             IACGGRHS V+TD+GALL FGWGLYGQCGQG+TDD LSP CVS++LG++++ VAAGLW
Sbjct: 326 TAIACGGRHSVVVTDSGALLAFGWGLYGQCGQGNTDDVLSPTCVSAILGVKMQDVAAGLW 385

Query: 363 HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIA 422
           HT+ IS+DGDVY+FGGNQFGQLG G DQAET+P+L+DAPSLEN +++SVSCGARH+A+I 
Sbjct: 386 HTVSISADGDVYSFGGNQFGQLGIGSDQAETIPKLVDAPSLENKNARSVSCGARHSAIIT 445

Query: 423 DDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAVPPT 477
           D+G+VFCWGWNKYGQLGLGD +DRN+P  V ++G  P NV+CGWWHTL+LA  PT
Sbjct: 446 DEGEVFCWGWNKYGQLGLGDSMDRNVPCIVPVDGYHPLNVSCGWWHTLVLAESPT 500


>gi|357125846|ref|XP_003564600.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like isoform
           1 [Brachypodium distachyon]
          Length = 499

 Score =  657 bits (1694), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 322/470 (68%), Positives = 381/470 (81%), Gaps = 6/470 (1%)

Query: 11  ERVVFMWGYLPGALPQRSPILSPLVVRLPLT-VGSAWRDVCGGGCGFAMAISDSRKLITW 69
           E+VV MWGYLPG  PQRSP+L+P+ VRLPL   G AWRDVCGGGCGFAMAIS+S KL+TW
Sbjct: 33  EQVVLMWGYLPGVSPQRSPLLAPVPVRLPLAATGDAWRDVCGGGCGFAMAISESGKLLTW 92

Query: 70  GSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVP 129
           GSTDD+GQSYVT+GKH E PE FPLP++  I +A  GWAHCVA+TE G VYTWGWKECVP
Sbjct: 93  GSTDDMGQSYVTAGKHEETPEAFPLPSDVVIARADTGWAHCVAITEEGVVYTWGWKECVP 152

Query: 130 SGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVS-RSSGGTSSGTDGRGSGEEGSKR 188
           +G V  D S+   L++D  E QS+  + QVSPRS VS R+S G +SG       EE +KR
Sbjct: 153 TGTVIADQSSVGTLERD--ESQSASASNQVSPRSHVSSRTSSGAASGPSESRGAEESTKR 210

Query: 189 RRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYG 248
           RR+S AKQ  +SS+S DENLSA PC+VT N GV+I  VAAGGRHTLALSD GQVWGWGYG
Sbjct: 211 RRLSSAKQGPDSSTSSDENLSAPPCIVTFNTGVKITAVAAGGRHTLALSDFGQVWGWGYG 270

Query: 249 GEGQLGLGSRIRMVSSPHPIPCIESS-YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIAC 307
           GEGQLGLGSRIR VSSPHPIPCIES+ YGKDR AA+ +G+ N+E    +V GN VK IAC
Sbjct: 271 GEGQLGLGSRIRTVSSPHPIPCIESALYGKDRPAAM-KGNKNAETQISKVMGNCVKAIAC 329

Query: 308 GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI 367
           GGRHS V+TD+G LLTFGWGLYGQCGQG+TDD LSP CVSS+LG+++EG AAGLWHT+CI
Sbjct: 330 GGRHSVVVTDSGTLLTFGWGLYGQCGQGNTDDVLSPTCVSSILGVKMEGAAAGLWHTVCI 389

Query: 368 SSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKV 427
           S DGDVY+FGGNQFGQLGTG D+AET+P+L+DA  LEN ++++VSCGARH+A+I D+ +V
Sbjct: 390 SVDGDVYSFGGNQFGQLGTGSDEAETVPKLVDASCLENKNARTVSCGARHSAIITDESEV 449

Query: 428 FCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAVPPT 477
           FCWGWNKYGQLGLGD +DRN+P  V ++     NV+CGWWHTL+LA  PT
Sbjct: 450 FCWGWNKYGQLGLGDSMDRNVPCIVPMDAYRALNVSCGWWHTLVLAESPT 499


>gi|326511212|dbj|BAJ87620.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 511

 Score =  652 bits (1683), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/486 (66%), Positives = 392/486 (80%), Gaps = 18/486 (3%)

Query: 6   QEEKMERVVFMWGYLPGALPQRSPILSPLVVRLP-LTVGSAWRDVCGGGCGFAMAISDSR 64
           +E    +VV MWGYLPG  PQRSP+L P+ VRLP    G AWRDVCGGGCGFAMAIS+S 
Sbjct: 30  EEAGKGQVVLMWGYLPGVSPQRSPLLGPVPVRLPPAAAGDAWRDVCGGGCGFAMAISESG 89

Query: 65  KLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGW 124
           KL+TWGSTDD+GQSYVT+GKH E PE FPLP++ +I +A AGWAHCVA+T+ G VYTWGW
Sbjct: 90  KLLTWGSTDDMGQSYVTAGKHEETPEAFPLPSDVAIARADAGWAHCVAITDEGVVYTWGW 149

Query: 125 KECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQ-----------VSPRSQVSRSSGGTS 173
           KECVP+GRV  D ++   L+KD  ERQS+   +Q           VSPRSQVSR+S G +
Sbjct: 150 KECVPTGRVIADQASVGTLEKD--ERQSASANDQGISHNKGNSIAVSPRSQVSRTSSGAA 207

Query: 174 SG-TDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRH 232
           SG ++ RG+ E+ +KRRR+S AKQ  +SS+SGDENLSA PC+VT N GV+I  VAAGGRH
Sbjct: 208 SGPSESRGT-EDSTKRRRLSSAKQGNDSSTSGDENLSAPPCVVTFNTGVKITAVAAGGRH 266

Query: 233 TLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES-SYGKDRSAALSRGSVNSE 291
           TLALSD GQVWGWGYGGEGQLGLGSRIR VSSPH IPCIES SY KDR +A+ +G+ N+E
Sbjct: 267 TLALSDFGQVWGWGYGGEGQLGLGSRIRTVSSPHTIPCIESASYSKDRPSAM-KGNKNAE 325

Query: 292 GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
           G   +V G+ V  IACGGRHS V+TD+GALL FGWGLYGQCGQG+TDD LSP CVS++LG
Sbjct: 326 GQINKVMGSRVTAIACGGRHSVVVTDSGALLAFGWGLYGQCGQGNTDDVLSPTCVSAILG 385

Query: 352 IQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSV 411
           ++++ VAAGLWHT+ IS+DGDVY+FGGNQFGQLG G DQAET+P+L+DAPSLEN +++SV
Sbjct: 386 VKMQDVAAGLWHTVSISADGDVYSFGGNQFGQLGIGSDQAETIPKLVDAPSLENKNARSV 445

Query: 412 SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLL 471
           SCGARH+A+I D+G+VFCWGWNKYGQLGLGD +DRN+P  V ++G  P NV+ GWWHTL+
Sbjct: 446 SCGARHSAIITDEGEVFCWGWNKYGQLGLGDSMDRNVPCIVPVDGYHPLNVSGGWWHTLV 505

Query: 472 LAVPPT 477
           LA  PT
Sbjct: 506 LAESPT 511


>gi|413951961|gb|AFW84610.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 588

 Score =  649 bits (1675), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/480 (67%), Positives = 392/480 (81%), Gaps = 9/480 (1%)

Query: 2   NGEGQEEKMERVVFMWGYLPGALPQRSPILSPLVVRLPLTVGSA----WRDVCGGGCGFA 57
            GEG   K ERVV MWGYLPG  PQRSP+L P+ VRLP T  +A    WRDVCGGGCGFA
Sbjct: 112 QGEGAGNK-ERVVLMWGYLPGVSPQRSPLLGPVPVRLPPTAATAAGDGWRDVCGGGCGFA 170

Query: 58  MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGG 117
           MAIS+S KL+TWGS DD+GQSYVT+GKH E PE FPLP+   IV+A AGWAHCVA+T+  
Sbjct: 171 MAISESGKLLTWGSADDMGQSYVTAGKHEETPEAFPLPSSVVIVRADAGWAHCVAITDEY 230

Query: 118 EVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTD 177
           +VYTWGWKECVP+GRV GD S+   ++KD  ERQ +  T+QVSPRSQVSR+S G ++G+ 
Sbjct: 231 DVYTWGWKECVPTGRVIGDQSSVGTMEKD--ERQMAMATDQVSPRSQVSRTSSGAAAGSS 288

Query: 178 GRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS 237
                ++ +KRR++SLAK   ESS+S DE+LSA PC+VT + GV+I  VAAGGRHTLALS
Sbjct: 289 ESRGTDDSTKRRKLSLAKHGPESSTSSDESLSAPPCVVTFSTGVKIVAVAAGGRHTLALS 348

Query: 238 DIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESS-YGKDRSAALSRGSVNSEGPGFR 296
           D+GQVWGWGYGGEGQLGLGSRIR VSSPHP+PCIES+ Y KDR +A+ +G+  +EG   +
Sbjct: 349 DLGQVWGWGYGGEGQLGLGSRIRTVSSPHPVPCIESALYTKDRPSAM-KGNKAAEGHVSK 407

Query: 297 VPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG 356
           V GN V+ IACGGRHSAV+TD+GALLTFGWGLYGQCGQG+TDD LSP CVSS+LGI+++ 
Sbjct: 408 VLGNCVRAIACGGRHSAVVTDSGALLTFGWGLYGQCGQGNTDDVLSPTCVSSILGIKMQD 467

Query: 357 VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR 416
           VAAGLWHT+C S DGDVY+FGGNQFGQLGTG DQAETLP+L+DA SLEN +++SVSCGAR
Sbjct: 468 VAAGLWHTVCTSVDGDVYSFGGNQFGQLGTGSDQAETLPKLVDATSLENKNARSVSCGAR 527

Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAVPP 476
           H+A+I D+G+VFCWGWNKYGQLGLGD +DRN+P  V ++   P NV+CGWWHTL+LA  P
Sbjct: 528 HSAIITDEGEVFCWGWNKYGQLGLGDSMDRNVPCSVRVDAYHPLNVSCGWWHTLVLAESP 587


>gi|359482088|ref|XP_002271900.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like isoform
           1 [Vitis vinifera]
          Length = 514

 Score =  649 bits (1674), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/481 (68%), Positives = 383/481 (79%), Gaps = 6/481 (1%)

Query: 2   NGEGQEEKMER-VVFMWGYLPGALPQRSPILSPLVVRLPLTVGS--AWRDVCGGGCGFAM 58
            GEG+  KME  VV+MWGYLPGA  Q SP+LSP+ V LP +  S  +W+DVCGGGCGFA+
Sbjct: 22  EGEGEAMKMEESVVYMWGYLPGASLQGSPLLSPVPVALPTSTLSEDSWKDVCGGGCGFAV 81

Query: 59  AISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGE 118
           AIS+S KLITWGS DDLGQSY+TSG+HGE PEPFPLPTEA IVKAAAGWAHCV++T+ GE
Sbjct: 82  AISESGKLITWGSEDDLGQSYLTSGQHGETPEPFPLPTEAPIVKAAAGWAHCVSLTDKGE 141

Query: 119 VYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDG 178
            YTWGWKECVPSG+V  D STG   +KD F +QS   TEQ  P+ Q S S+GG  S  D 
Sbjct: 142 AYTWGWKECVPSGKVLLD-STGVRFEKDSFGKQSLLQTEQEGPKPQSSNSTGGMLSRVDN 200

Query: 179 RGSGEEGSKRRRISLAKQTAESSS-SGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS 237
           R + E   K+RR S AKQ  ESSS S DE   A PCLVTL PGVRI+T+AAGGRHTLALS
Sbjct: 201 RKAREGSIKKRRTSSAKQEPESSSMSDDETFLASPCLVTLGPGVRISTIAAGGRHTLALS 260

Query: 238 DIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIE-SSYGKDRSAALSRGSVNSEGPGFR 296
           D+GQVWGWGYGGEGQLGLGSR ++VSSPH IPC   S+YGKDR + + +GS++S     +
Sbjct: 261 DMGQVWGWGYGGEGQLGLGSRTKLVSSPHLIPCFNPSAYGKDRPSLVHQGSLSSTEDISK 320

Query: 297 VPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG 356
           VPG+ VKGIACGGRHSAVITDAG LLTFGWGL+GQCG G+T D+L P CVS+L G+++ G
Sbjct: 321 VPGSRVKGIACGGRHSAVITDAGQLLTFGWGLHGQCGLGNTHDQLRPACVSALSGVKVAG 380

Query: 357 VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR 416
           +AAGLWHT+C S++G VYAFGGNQFGQLGTG DQAETLP+LLDA +LEN  +K VSCGAR
Sbjct: 381 IAAGLWHTLCFSAEGQVYAFGGNQFGQLGTGADQAETLPKLLDASNLENKRAKIVSCGAR 440

Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAVPP 476
           H+ V+ + G++F WGWNKYGQLGLGD IDRNIPS V+I GC  +NVACGWWHTLLLA   
Sbjct: 441 HSVVLTEGGEIFSWGWNKYGQLGLGDCIDRNIPSPVSIGGCQLKNVACGWWHTLLLATTS 500

Query: 477 T 477
           T
Sbjct: 501 T 501


>gi|357125848|ref|XP_003564601.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like isoform
           2 [Brachypodium distachyon]
          Length = 518

 Score =  645 bits (1665), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 322/489 (65%), Positives = 381/489 (77%), Gaps = 25/489 (5%)

Query: 11  ERVVFMWGYLPGALPQRSPILSPLVVRLPLT-VGSAWRDVCGGGCGFAMAISDSRKLITW 69
           E+VV MWGYLPG  PQRSP+L+P+ VRLPL   G AWRDVCGGGCGFAMAIS+S KL+TW
Sbjct: 33  EQVVLMWGYLPGVSPQRSPLLAPVPVRLPLAATGDAWRDVCGGGCGFAMAISESGKLLTW 92

Query: 70  GSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVP 129
           GSTDD+GQSYVT+GKH E PE FPLP++  I +A  GWAHCVA+TE G VYTWGWKECVP
Sbjct: 93  GSTDDMGQSYVTAGKHEETPEAFPLPSDVVIARADTGWAHCVAITEEGVVYTWGWKECVP 152

Query: 130 SGRVFGDLSTGTGLDKDVFERQSSFLTEQ-------------------VSPRSQVS-RSS 169
           +G V  D S+   L++D  E QS+  + Q                   VSPRS VS R+S
Sbjct: 153 TGTVIADQSSVGTLERD--ESQSASASNQGESFSALILYRYNKGNSIAVSPRSHVSSRTS 210

Query: 170 GGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAG 229
            G +SG       EE +KRRR+S AKQ  +SS+S DENLSA PC+VT N GV+I  VAAG
Sbjct: 211 SGAASGPSESRGAEESTKRRRLSSAKQGPDSSTSSDENLSAPPCIVTFNTGVKITAVAAG 270

Query: 230 GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESS-YGKDRSAALSRGSV 288
           GRHTLALSD GQVWGWGYGGEGQLGLGSRIR VSSPHPIPCIES+ YGKDR AA+ +G+ 
Sbjct: 271 GRHTLALSDFGQVWGWGYGGEGQLGLGSRIRTVSSPHPIPCIESALYGKDRPAAM-KGNK 329

Query: 289 NSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS 348
           N+E    +V GN VK IACGGRHS V+TD+G LLTFGWGLYGQCGQG+TDD LSP CVSS
Sbjct: 330 NAETQISKVMGNCVKAIACGGRHSVVVTDSGTLLTFGWGLYGQCGQGNTDDVLSPTCVSS 389

Query: 349 LLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHS 408
           +LG+++EG AAGLWHT+CIS DGDVY+FGGNQFGQLGTG D+AET+P+L+DA  LEN ++
Sbjct: 390 ILGVKMEGAAAGLWHTVCISVDGDVYSFGGNQFGQLGTGSDEAETVPKLVDASCLENKNA 449

Query: 409 KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWH 468
           ++VSCGARH+A+I D+ +VFCWGWNKYGQLGLGD +DRN+P  V ++     NV+CGWWH
Sbjct: 450 RTVSCGARHSAIITDESEVFCWGWNKYGQLGLGDSMDRNVPCIVPMDAYRALNVSCGWWH 509

Query: 469 TLLLAVPPT 477
           TL+LA  PT
Sbjct: 510 TLVLAESPT 518


>gi|242054967|ref|XP_002456629.1| hypothetical protein SORBIDRAFT_03g039710 [Sorghum bicolor]
 gi|241928604|gb|EES01749.1| hypothetical protein SORBIDRAFT_03g039710 [Sorghum bicolor]
          Length = 503

 Score =  643 bits (1658), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/474 (68%), Positives = 388/474 (81%), Gaps = 10/474 (2%)

Query: 11  ERVVFMWGYLPGALPQRSPILSPLVVRLP----LTVGSAWRDVCGGGCGFAMAISDSRKL 66
           ERVV MWGYLPG  PQRSP+L P+ VRLP       G  WRDVCGGGCGFAMAIS+S KL
Sbjct: 33  ERVVLMWGYLPGVSPQRSPLLGPVPVRLPPAAAAAAGDGWRDVCGGGCGFAMAISESGKL 92

Query: 67  ITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKE 126
           +TWGS DD+GQSYVT+GKH E PE FPLP+  +IV+A AGWAHCVA+T+ G+VYTWGWKE
Sbjct: 93  LTWGSADDMGQSYVTAGKHEETPEAFPLPSGVAIVRADAGWAHCVAITDEGDVYTWGWKE 152

Query: 127 CVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGS 186
           CVP+GRV GD S+   ++KD  ERQ +  T+QVSPRSQVSR+S G +SG       ++ +
Sbjct: 153 CVPTGRVIGDQSSVGTMEKD--ERQMAMATDQVSPRSQVSRTSSGAASGPPESRGTDDST 210

Query: 187 KRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS--DIGQVWG 244
           KRRR+S AK   ESS+S DE+LSA PC+VT N GV+I +VAAGGRHTLALS  D+GQVWG
Sbjct: 211 KRRRLSSAKHGPESSTSSDESLSAPPCVVTFNTGVKIVSVAAGGRHTLALSASDLGQVWG 270

Query: 245 WGYGGEGQLGLGSRIRMVSSPHPIPCIESS-YGKDRSAALSRGSVNSEGPGFRVPGNYVK 303
           WGYGGEGQLGLGSRIR VSSPHP+PCIES+ Y KDR +A+ +G+  +EG   +V GN V+
Sbjct: 271 WGYGGEGQLGLGSRIRTVSSPHPVPCIESALYSKDRPSAM-KGNKAAEGHVSKVLGNCVR 329

Query: 304 GIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWH 363
            IACGGRHSAV+TD+GALLTFGWGLYGQCGQG+TDD LSP CVSS+LGI+++ VAAGLWH
Sbjct: 330 AIACGGRHSAVVTDSGALLTFGWGLYGQCGQGNTDDVLSPTCVSSILGIKMQDVAAGLWH 389

Query: 364 TICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
           T+C S DGDVY+FGGNQFGQLGTG DQAET+P+L+DA SLEN +++SVSCGARH+A+I D
Sbjct: 390 TVCTSVDGDVYSFGGNQFGQLGTGSDQAETVPKLVDATSLENKNARSVSCGARHSAIITD 449

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAVPPT 477
           +G+VFCWGWNKYGQLGLGD +DRN+P  V ++   P NV+CGWWHTL+LA  PT
Sbjct: 450 EGEVFCWGWNKYGQLGLGDSMDRNVPCSVPVDAYHPLNVSCGWWHTLVLAESPT 503


>gi|297740323|emb|CBI30505.3| unnamed protein product [Vitis vinifera]
          Length = 478

 Score =  637 bits (1642), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 320/466 (68%), Positives = 373/466 (80%), Gaps = 5/466 (1%)

Query: 16  MWGYLPGALPQRSPILSPLVVRLPLTVGS--AWRDVCGGGCGFAMAISDSRKLITWGSTD 73
           MWGYLPGA  Q SP+LSP+ V LP +  S  +W+DVCGGGCGFA+AIS+S KLITWGS D
Sbjct: 1   MWGYLPGASLQGSPLLSPVPVALPTSTLSEDSWKDVCGGGCGFAVAISESGKLITWGSED 60

Query: 74  DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRV 133
           DLGQSY+TSG+HGE PEPFPLPTEA IVKAAAGWAHCV++T+ GE YTWGWKECVPSG+V
Sbjct: 61  DLGQSYLTSGQHGETPEPFPLPTEAPIVKAAAGWAHCVSLTDKGEAYTWGWKECVPSGKV 120

Query: 134 FGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISL 193
             D STG   +KD F +QS   TEQ  P+ Q S S+GG  S  D R + E   K+RR S 
Sbjct: 121 LLD-STGVRFEKDSFGKQSLLQTEQEGPKPQSSNSTGGMLSRVDNRKAREGSIKKRRTSS 179

Query: 194 AKQTAESSS-SGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQ 252
           AKQ  ESSS S DE   A PCLVTL PGVRI+T+AAGGRHTLALSD+GQVWGWGYGGEGQ
Sbjct: 180 AKQEPESSSMSDDETFLASPCLVTLGPGVRISTIAAGGRHTLALSDMGQVWGWGYGGEGQ 239

Query: 253 LGLGSRIRMVSSPHPIPCIE-SSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRH 311
           LGLGSR ++VSSPH IPC   S+YGKDR + + +GS++S     +VPG+ VKGIACGGRH
Sbjct: 240 LGLGSRTKLVSSPHLIPCFNPSAYGKDRPSLVHQGSLSSTEDISKVPGSRVKGIACGGRH 299

Query: 312 SAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDG 371
           SAVITDAG LLTFGWGL+GQCG G+T D+L P CVS+L G+++ G+AAGLWHT+C S++G
Sbjct: 300 SAVITDAGQLLTFGWGLHGQCGLGNTHDQLRPACVSALSGVKVAGIAAGLWHTLCFSAEG 359

Query: 372 DVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWG 431
            VYAFGGNQFGQLGTG DQAETLP+LLDA +LEN  +K VSCGARH+ V+ + G++F WG
Sbjct: 360 QVYAFGGNQFGQLGTGADQAETLPKLLDASNLENKRAKIVSCGARHSVVLTEGGEIFSWG 419

Query: 432 WNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAVPPT 477
           WNKYGQLGLGD IDRNIPS V+I GC  +NVACGWWHTLLLA   T
Sbjct: 420 WNKYGQLGLGDCIDRNIPSPVSIGGCQLKNVACGWWHTLLLATTST 465


>gi|222631832|gb|EEE63964.1| hypothetical protein OsJ_18789 [Oryza sativa Japonica Group]
          Length = 479

 Score =  636 bits (1641), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 316/480 (65%), Positives = 373/480 (77%), Gaps = 8/480 (1%)

Query: 2   NGEGQEEKMERVVFMWGYLPGALPQRSPILSPLVVRLPLTVGSA---WRDVCGGGCGFAM 58
           +G G   + ERVV MWGYLPG   QRSP+L P+ VR+P    +A   WRDV GGGCGFAM
Sbjct: 4   DGGGAGRRKERVVLMWGYLPGVSQQRSPLLGPVPVRMPDAAAAAGDAWRDVAGGGCGFAM 63

Query: 59  AISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGE 118
           A+S+  KL TWGSTDD+GQSYVT+GKH E PE FPLP++ +IV+A AGWAHCVA+T  G+
Sbjct: 64  AVSEQGKLFTWGSTDDMGQSYVTAGKHEETPEAFPLPSDIAIVRADAGWAHCVAITGKGD 123

Query: 119 VYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDG 178
           VYTWGWKECVP+GRV  D S    +D D  +RQS   T+QVSPRS+VSR+S   +SG   
Sbjct: 124 VYTWGWKECVPTGRVIADHSATGAMDCD--KRQSGVATDQVSPRSKVSRTSTKAASGPAE 181

Query: 179 RGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSD 238
             S E+ +KRRR+S +K  AES SS DENLSA PC+VT N GV+I  VAAGGRHTL LSD
Sbjct: 182 SRSSEDSTKRRRLSSSKHGAESESSSDENLSAPPCVVTFNTGVKIVEVAAGGRHTLVLSD 241

Query: 239 IGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESS-YGKDRSAALSRGSVNSEGPGFRV 297
            GQVWGWGYGGEGQLGLGSRIR VSSPHPIPC++S+ Y KDR+  +  GS   EG   R 
Sbjct: 242 FGQVWGWGYGGEGQLGLGSRIRTVSSPHPIPCVQSAFYSKDRTG-IVMGSRTLEGTNDRA 300

Query: 298 PGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGV 357
               VK IACGGRHSAV+TD+G LLTFGWGLYGQCGQG+TDD LSP CVS+++G++I+ V
Sbjct: 301 -ATCVKAIACGGRHSAVVTDSGTLLTFGWGLYGQCGQGNTDDILSPTCVSAIMGVKIQRV 359

Query: 358 AAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARH 417
           AAGLWHT+C S+DGDVY+FGGNQFGQLGTG DQAE +P+L++A  LEN H++ VSCGARH
Sbjct: 360 AAGLWHTVCTSADGDVYSFGGNQFGQLGTGSDQAEIVPKLVEASKLENNHARGVSCGARH 419

Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAVPPT 477
           +AVI D G VFCWGWNKYGQLGLGD  DRN+P QV +E   P NV+CGWWHTL+LA  PT
Sbjct: 420 SAVITDKGDVFCWGWNKYGQLGLGDSTDRNVPCQVPVEAYNPLNVSCGWWHTLVLAEYPT 479


>gi|218196915|gb|EEC79342.1| hypothetical protein OsI_20201 [Oryza sativa Indica Group]
          Length = 484

 Score =  631 bits (1628), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 316/485 (65%), Positives = 373/485 (76%), Gaps = 13/485 (2%)

Query: 2   NGEGQEEKMERVVFMWGYLPGALPQRSPILSPLVVRLPLTVGSA---WRDVCGGGCGFAM 58
           +G G   + ERVV MWGYLPG   QRSP+L P+ VR+P    +A   WRDV GGGCGFAM
Sbjct: 4   DGGGAGRRKERVVLMWGYLPGVSQQRSPLLGPVPVRMPDAAAAAGDAWRDVAGGGCGFAM 63

Query: 59  AISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGE 118
           A+S+  KL TWGSTDD+GQSYVT+GKH E PE FPLP++ +IV+A AGWAHCVA+T  G+
Sbjct: 64  AVSEQGKLFTWGSTDDMGQSYVTAGKHEETPEAFPLPSDIAIVRADAGWAHCVAITGKGD 123

Query: 119 VYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQ-----VSPRSQVSRSSGGTS 173
           VYTWGWKECVP+GRV  D S    +D D  +RQS   T+Q     VSPRS+VSR+S   +
Sbjct: 124 VYTWGWKECVPTGRVIADHSATGAMDCD--KRQSGVATDQGNSITVSPRSKVSRTSTKAA 181

Query: 174 SGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHT 233
           SG     S E+ +KRRR+S +K  AES SS DENLSA PC+VT N GV+I  VAAGGRHT
Sbjct: 182 SGPAESRSSEDSTKRRRLSSSKHGAESESSSDENLSAPPCVVTFNTGVKIVEVAAGGRHT 241

Query: 234 LALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESS-YGKDRSAALSRGSVNSEG 292
           L LSD GQVWGWGYGGEGQLGLGSRIR VSSPHPIPC++S+ Y KDR+  +  GS   EG
Sbjct: 242 LVLSDFGQVWGWGYGGEGQLGLGSRIRTVSSPHPIPCVQSAFYSKDRTG-IVMGSRTLEG 300

Query: 293 PGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGI 352
              R     VK IACGGRHSAV+TD+G LLTFGWGLYGQCGQG+TDD LSP CVS+++G+
Sbjct: 301 TNDRA-ATCVKAIACGGRHSAVVTDSGTLLTFGWGLYGQCGQGNTDDILSPTCVSAIMGV 359

Query: 353 QIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVS 412
           +I+ VAAGLWHT+C S+DGDVY+FGGNQFGQLGTG DQAE +P+L++A  LEN H++ VS
Sbjct: 360 KIQRVAAGLWHTVCTSADGDVYSFGGNQFGQLGTGSDQAEIVPKLVEASKLENKHARGVS 419

Query: 413 CGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           CGARH+AVI D G VFCWGWNKYGQLGLGD  DRN+P QV +E   P NV+CGWWHTL+L
Sbjct: 420 CGARHSAVITDKGDVFCWGWNKYGQLGLGDSTDRNVPCQVPVEAYNPLNVSCGWWHTLVL 479

Query: 473 AVPPT 477
           A  PT
Sbjct: 480 AEYPT 484


>gi|449448608|ref|XP_004142058.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Cucumis
           sativus]
          Length = 485

 Score =  625 bits (1611), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 304/475 (64%), Positives = 365/475 (76%), Gaps = 8/475 (1%)

Query: 2   NGEGQEEKMERVVFMWGYLPGALPQRSPILSPLVVRLPLTV--GSAWRDVCGGGCGFAMA 59
           NG     K++ +V+MWGYLPGALP +S +L P  VRLP ++  G +W++VCGGGCGFAMA
Sbjct: 10  NGAKMANKIDALVYMWGYLPGALPDKSLLLLPEPVRLPSSIDGGDSWKEVCGGGCGFAMA 69

Query: 60  ISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEV 119
           ISDS KLITWG+ D+ GQ ++TSGKHGEIPE FP PTE  +VKA AGWAHCV+VTE GEV
Sbjct: 70  ISDSGKLITWGAADEEGQIFLTSGKHGEIPEAFPFPTEDLVVKAVAGWAHCVSVTEAGEV 129

Query: 120 YTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGR 179
           YTWGW EC+PS +   DL+ G GL KD   +QS    EQ  P  Q S       S  D +
Sbjct: 130 YTWGWSECIPSMKTLRDLAIGGGLLKDSTGKQSLTTAEQAGP--QDSNGVDRMDSQLDNK 187

Query: 180 GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDI 239
             GEE +KRR+I+  K+  E SS GD+  +  PCLV   PGV+IA VAAGGRHTLALSD+
Sbjct: 188 RVGEETAKRRKINSVKEDTEISSPGDDLFTTLPCLVNFGPGVKIAAVAAGGRHTLALSDM 247

Query: 240 GQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIE-SSYGKDRSAALSRGSVNSEGPGFRVP 298
           GQVWGWG+GGEGQLGLG+R++MVSSPH IPCIE  +  KDRS+ + + S  + G   +V 
Sbjct: 248 GQVWGWGHGGEGQLGLGTRVKMVSSPHIIPCIELPASAKDRSSVIYQASKAAAG---KVL 304

Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
           GNYVKGIACGGRHS V+TD GALLTFGWGLYGQCGQG+T+D L P CVSSL   Q+E ++
Sbjct: 305 GNYVKGIACGGRHSVVVTDTGALLTFGWGLYGQCGQGNTNDLLRPTCVSSLSSTQVESIS 364

Query: 359 AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
           AGLWHT+CI+++G VYAFGGNQFGQLGTG DQ ET+PRLLDAP LE   +K VSCGARH 
Sbjct: 365 AGLWHTVCITAEGLVYAFGGNQFGQLGTGTDQGETIPRLLDAPILEGKCAKRVSCGARHN 424

Query: 419 AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
            V+ DDG++F WGWNKYGQLGLGD IDRNIPS+V+I+GC+PRN+ CGWWHTL+LA
Sbjct: 425 VVLTDDGQLFSWGWNKYGQLGLGDSIDRNIPSKVSIDGCLPRNIVCGWWHTLMLA 479


>gi|449519078|ref|XP_004166562.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
           sativus]
          Length = 472

 Score =  621 bits (1601), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 302/469 (64%), Positives = 363/469 (77%), Gaps = 8/469 (1%)

Query: 8   EKMERVVFMWGYLPGALPQRSPILSPLVVRLPLTV--GSAWRDVCGGGCGFAMAISDSRK 65
            K++ +V+MWGYLPGALP +S +L P  VRLP ++  G +W++VCGGGCGFAMAISDS K
Sbjct: 3   NKIDALVYMWGYLPGALPDKSLLLLPEPVRLPSSIDGGDSWKEVCGGGCGFAMAISDSGK 62

Query: 66  LITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWK 125
           LITWG+ D+ GQ ++TSGKHGEIPE FP PTE  +VKA AGWAHCV+VTE GEVYTWGW 
Sbjct: 63  LITWGAADEEGQIFLTSGKHGEIPEAFPFPTEDLVVKAVAGWAHCVSVTEAGEVYTWGWS 122

Query: 126 ECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEG 185
           EC+PS +   DL+ G GL KD   +QS    EQ  P  Q S       S  D +  GEE 
Sbjct: 123 ECIPSMKTLRDLAIGGGLLKDSTGKQSLTTAEQAGP--QDSNGVDRMDSQLDNKRVGEET 180

Query: 186 SKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGW 245
           +KRR+I+  K+  E SS GD+  +  PCLV   PGV+IA VAAGGRHTLALSD+GQVWGW
Sbjct: 181 AKRRKINSVKEDTEISSPGDDLFTTLPCLVNFGPGVKIAAVAAGGRHTLALSDMGQVWGW 240

Query: 246 GYGGEGQLGLGSRIRMVSSPHPIPCIE-SSYGKDRSAALSRGSVNSEGPGFRVPGNYVKG 304
           G+GGEGQLGLG+R++MVSSPH IPCIE  +  KDRS+ + + S  + G   +V GNYVKG
Sbjct: 241 GHGGEGQLGLGTRVKMVSSPHIIPCIELPASAKDRSSVIYQASKAAAG---KVLGNYVKG 297

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           IACGGRHS V+TD GALLTFGWGLYGQCGQG+T+D L P CVSSL   Q+E ++AGLWHT
Sbjct: 298 IACGGRHSVVVTDTGALLTFGWGLYGQCGQGNTNDLLRPTCVSSLSSTQVESISAGLWHT 357

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           +CI+++G VYAFGGNQFGQLGTG DQ ET+PRLLDAP LE   +K VSCGARH  V+ DD
Sbjct: 358 VCITAEGLVYAFGGNQFGQLGTGTDQGETIPRLLDAPILEGKCAKRVSCGARHNVVLTDD 417

Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           G++F WGWNKYGQLGLGD IDRNIPS+V+I+GC+PRN+ CGWWHTL+LA
Sbjct: 418 GQLFSWGWNKYGQLGLGDSIDRNIPSKVSIDGCLPRNIVCGWWHTLMLA 466


>gi|147790448|emb|CAN69973.1| hypothetical protein VITISV_001453 [Vitis vinifera]
          Length = 498

 Score =  615 bits (1585), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 320/493 (64%), Positives = 374/493 (75%), Gaps = 33/493 (6%)

Query: 9   KMER-VVFMWGYLPGALPQRSPILSPLVVRLPLTVGS--AWRDVCGGGCGFAMAISDSRK 65
           KME  VV+MWGYLPGA  Q SP+LSP+ V LP +  S  +W+DVCGGGCGFA+AIS+S K
Sbjct: 2   KMEESVVYMWGYLPGASLQGSPLLSPVPVALPASTLSEDSWKDVCGGGCGFAVAISESGK 61

Query: 66  LITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWK 125
           LITWGS DDLGQSY+TSG+HGE PEPFPLPTEA IVKAAAGWAHCV++T+ GE YTWGWK
Sbjct: 62  LITWGSEDDLGQSYLTSGQHGETPEPFPLPTEAPIVKAAAGWAHCVSLTDKGEAYTWGWK 121

Query: 126 ECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEG 185
           ECVPSG+V  D STGT + K   + +         P+ Q S S+GG  S  D R + E  
Sbjct: 122 ECVPSGKVLLD-STGTNVAKPELDTEG--------PKPQXSNSTGGMLSRVDNRKAREGS 172

Query: 186 SKRRRISLAKQTAESSS-SGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWG 244
            K+RR S AKQ  ESSS S DE   A PCLVTL PGVRI+TVAAGGRHTLALSD+GQVWG
Sbjct: 173 IKKRRTSSAKQEPESSSMSDDETFLASPCLVTLGPGVRISTVAAGGRHTLALSDMGQVWG 232

Query: 245 WGYGGEGQLGLGSRIRMVSSPHPIPCIE-SSYGKDRSAALSRGSVNSEGPGFRVPGNYVK 303
           WGYGGEGQLGLGSR ++VSSPH IPC   S+YGKDR + + +GS++S     +VPG+ VK
Sbjct: 233 WGYGGEGQLGLGSRTKLVSSPHLIPCFNPSAYGKDRPSLVHQGSLSSTEDISKVPGSRVK 292

Query: 304 GIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWH 363
           GIACGGRHSAVITDAG LLTFGWGL+GQCG G+T D+L P CVS+L G+++ G+AAGLWH
Sbjct: 293 GIACGGRHSAVITDAGQLLTFGWGLHGQCGLGNTHDQLRPACVSALSGVKVXGIAAGLWH 352

Query: 364 TICISSDGDVYAFGGNQFGQLGTGGDQA-------------------ETLPRLLDAPSLE 404
           T+C S++G VYAFGGNQFGQLGTG DQA                   ETLP+LLDA +LE
Sbjct: 353 TLCFSAEGQVYAFGGNQFGQLGTGADQAEFDSRIXIPSLGEFRKRLTETLPKLLDASNLE 412

Query: 405 NVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVAC 464
           N  +K VSCGARH+ V+ + G++F WGWNKYGQLGLGD IDRNIPS V+I GC  +NVAC
Sbjct: 413 NKRAKIVSCGARHSVVLTEGGEIFSWGWNKYGQLGLGDCIDRNIPSPVSIGGCQLKNVAC 472

Query: 465 GWWHTLLLAVPPT 477
           GWWHTLLLA   T
Sbjct: 473 GWWHTLLLATTST 485


>gi|255586057|ref|XP_002533695.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223526406|gb|EEF28690.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 478

 Score =  613 bits (1580), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 312/485 (64%), Positives = 376/485 (77%), Gaps = 25/485 (5%)

Query: 1   MNGEGQEE--KMER-----VVFMWGYLPGALPQRSPILSPLVVRLPLTVG---SAWRDVC 50
           +NG G+EE  KME       V+M GYLPG  P++SPILSP  +++P++ G    +W+DVC
Sbjct: 3   INGNGEEEDVKMEECCKVTAVYMCGYLPGISPEKSPILSP--IQVPISDGGGFDSWKDVC 60

Query: 51  GGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
            GGCGFAMAIS S  LITWGSTD+ GQSY+TSGKHGEIPEPFPLP EAS+VKAAAGWAHC
Sbjct: 61  SGGCGFAMAISGSGNLITWGSTDEEGQSYLTSGKHGEIPEPFPLPCEASVVKAAAGWAHC 120

Query: 111 VAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFL-TEQVSPRSQVSRSS 169
           V+VTE GEV+TWGWKECVPS ++    +TG         +Q++ L TE+VS RS+ S  +
Sbjct: 121 VSVTETGEVFTWGWKECVPSVKIIQRDNTG---------KQNALLQTEKVSSRSEGSSLT 171

Query: 170 GGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAG 229
            GT   +D + +G+E  KRRR+S  K+  ESS SGDE  +  P +VTL PGVRI  VAAG
Sbjct: 172 RGTVLNSDSKRTGDEIVKRRRVSPTKEDFESSPSGDEFFTVLPLMVTLAPGVRITNVAAG 231

Query: 230 GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSY-GKDRSAALSRGSV 288
           GRHTLALSD+GQVWGWGYGGEGQLGLGSRI+MVSSPH IPCI++S  GKDRS  + +G++
Sbjct: 232 GRHTLALSDMGQVWGWGYGGEGQLGLGSRIKMVSSPHLIPCIDASASGKDRSLIVHQGNL 291

Query: 289 NSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS 348
                    PG+YVK IACGGRHSA++TD GALLTFGWGLYGQCGQG+T+D+L P CV +
Sbjct: 292 TPSAQASTFPGSYVKEIACGGRHSAIVTDTGALLTFGWGLYGQCGQGTTNDQLRPACVPA 351

Query: 349 LLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHS 408
           L GI++  +AAGLWHT+CIS+DG VY FGGNQFGQLGT  DQ E  P+ L APSL + H+
Sbjct: 352 LSGIKVISIAAGLWHTVCISADGHVYTFGGNQFGQLGTDTDQTE--PKQLYAPSLGSKHA 409

Query: 409 KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWH 468
           K VSCGARH+AV+ +DG+V+ WGWNKYGQLGLGD IDRNIPSQV IEG  P+N+ACGWWH
Sbjct: 410 KIVSCGARHSAVLTEDGQVYSWGWNKYGQLGLGDSIDRNIPSQVPIEGYRPKNIACGWWH 469

Query: 469 TLLLA 473
           TLLLA
Sbjct: 470 TLLLA 474


>gi|356566559|ref|XP_003551498.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 525

 Score =  609 bits (1571), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 304/466 (65%), Positives = 362/466 (77%), Gaps = 6/466 (1%)

Query: 9   KMERVVFMWGYLPGALPQRSPILSPLVVRL--PLTVGSAWRDVCGGGCGFAMAISDSRKL 66
           + E++V+MWGYLPGA P++SPILSP  V L  P     +W+DVCGGGCGFAM IS+  KL
Sbjct: 59  RAEKMVYMWGYLPGASPEKSPILSPAPVTLSDPSLAVDSWKDVCGGGCGFAMVISEKGKL 118

Query: 67  ITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKE 126
           ITWGS DD GQSY+ SGKHGEIP  + LPTEAS+VKAAAGWAHC +VTE GEVY WGWKE
Sbjct: 119 ITWGSADDEGQSYLISGKHGEIPGLYQLPTEASVVKAAAGWAHCASVTEEGEVYAWGWKE 178

Query: 127 CVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGS 186
           CVPSG+V  D  T   L KD+  +QSS + EQ SP  Q S +S G+ S  D +  G+E  
Sbjct: 179 CVPSGKVITDFITVGSLQKDIAGKQSSSIAEQGSP--QSSNTSSGSDSHHDNKKVGDEVV 236

Query: 187 KRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWG 246
           KRR+I+ ++Q ++S +SGDE  +  P LVTL  GV+I +V+ GGRHTLALSD+GQVWGWG
Sbjct: 237 KRRKITFSRQDSDSQASGDEFFTVSPSLVTLGNGVKITSVSLGGRHTLALSDVGQVWGWG 296

Query: 247 YGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIA 306
           YGGEGQLGLGSR++MVSSPH IPCIES+ GKD+S+A  +GS  +   G  V G+YV  I+
Sbjct: 297 YGGEGQLGLGSRVKMVSSPHLIPCIESA-GKDKSSAFHQGS-GAGAQGSNVTGSYVMDIS 354

Query: 307 CGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC 366
           CGGRHS VITDAGALLTFGWGLYGQCGQG+  D+L P  V SLLG ++E +AAGLWHT+C
Sbjct: 355 CGGRHSVVITDAGALLTFGWGLYGQCGQGNNVDQLRPTLVPSLLGTRVEKIAAGLWHTLC 414

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           ++ +G +YAFGGNQFGQLGTG DQ ET PR LDA   EN HS  VSCGARH+A++ DDG 
Sbjct: 415 VTVNGQIYAFGGNQFGQLGTGTDQPETSPRQLDASRFENKHSSIVSCGARHSALLTDDGH 474

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           +F WGWNKYGQLGLGD +DRNIP QV+I GC PRNVACGWWHTLLL
Sbjct: 475 LFTWGWNKYGQLGLGDSVDRNIPGQVSIAGCRPRNVACGWWHTLLL 520



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 30/169 (17%)

Query: 334 QGSTDD--ELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD-Q 390
           Q S D+   +SP+ V+   G++I  V+ G  HT+ +S  G V+ +G    GQLG G   +
Sbjct: 251 QASGDEFFTVSPSLVTLGNGVKITSVSLGGRHTLALSDVGQVWGWGYGGEGQLGLGSRVK 310

Query: 391 AETLPRLLDAPSLENV------------------------HSKSVSCGARHTAVIADDGK 426
             + P L+  P +E+                         +   +SCG RH+ VI D G 
Sbjct: 311 MVSSPHLI--PCIESAGKDKSSAFHQGSGAGAQGSNVTGSYVMDISCGGRHSVVITDAGA 368

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLAV 474
           +  +GW  YGQ G G+ +D+  P+ V ++ G     +A G WHTL + V
Sbjct: 369 LLTFGWGLYGQCGQGNNVDQLRPTLVPSLLGTRVEKIAAGLWHTLCVTV 417


>gi|356523185|ref|XP_003530222.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC3-like [Glycine max]
          Length = 528

 Score =  602 bits (1551), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 305/467 (65%), Positives = 357/467 (76%), Gaps = 9/467 (1%)

Query: 11  ERVVFMWGYLPGALPQRSPILSPLVVRLP--LTVGSAWRDVCGGGCGFAMAISDSRKLIT 68
           E++V+MWGYLPGA P++SPILSP  V L      G +W+DVCGGGCGFAMAIS+  KLIT
Sbjct: 61  EKMVYMWGYLPGASPEKSPILSPAPVNLSDRSLAGDSWKDVCGGGCGFAMAISEKGKLIT 120

Query: 69  WGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECV 128
           WGS DD GQSY+ SGKHGEIP  + LPTEAS+VKAAAGWAHC +V E GEVY WGWKECV
Sbjct: 121 WGSADDEGQSYLISGKHGEIPGLYQLPTEASVVKAAAGWAHCASVNEEGEVYAWGWKECV 180

Query: 129 PSGRVFGDLSTGTGLDKDVFERQSS---FLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEG 185
           PSG+V  D  T     KDV  +Q S   F     SP  Q S +S G+ S  D +  G+E 
Sbjct: 181 PSGKVITDFITVGSFQKDVAGKQRSXWNFRHXTGSP--QSSNTSSGSDSHHDNKKVGDEV 238

Query: 186 SKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGW 245
            KRR+I+ ++Q ++S +SGDE  +  P LVTL  GV+I +VA GGRHTLALSD+GQVWGW
Sbjct: 239 LKRRKITFSRQDSDSQASGDEFFTVSPSLVTLASGVKITSVAVGGRHTLALSDVGQVWGW 298

Query: 246 GYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGI 305
           GYGGEGQLGLGSR++MVSSPH IPCIESS GKD+S+A  +GS  +   G  V G+YV  I
Sbjct: 299 GYGGEGQLGLGSRVKMVSSPHLIPCIESS-GKDKSSAFHQGS-GAGAQGSNVTGSYVMDI 356

Query: 306 ACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTI 365
           ACGGRHS VITDAGALLTFGWGLYGQCGQG+  D+L P  V SLLG ++E +AAGLWHT+
Sbjct: 357 ACGGRHSVVITDAGALLTFGWGLYGQCGQGNNADQLRPTLVPSLLGTRVEKIAAGLWHTL 416

Query: 366 CISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDG 425
           C+S +G +YAFGGNQFGQLGTG DQ ET PR LDA   EN HS  VSCGARH+A++ DDG
Sbjct: 417 CVSVNGQIYAFGGNQFGQLGTGSDQPETSPRQLDASRFENKHSSIVSCGARHSALLTDDG 476

Query: 426 KVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
            +F WGWNKYGQLGLGD +DRNIP QV+I GC PRNVACGWWHTLL+
Sbjct: 477 HLFTWGWNKYGQLGLGDSVDRNIPGQVSIAGCRPRNVACGWWHTLLM 523



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/169 (31%), Positives = 82/169 (48%), Gaps = 30/169 (17%)

Query: 334 QGSTDD--ELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD-Q 390
           Q S D+   +SP+ V+   G++I  VA G  HT+ +S  G V+ +G    GQLG G   +
Sbjct: 254 QASGDEFFTVSPSLVTLASGVKITSVAVGGRHTLALSDVGQVWGWGYGGEGQLGLGSRVK 313

Query: 391 AETLPRLLDAPSLE---------------------NV---HSKSVSCGARHTAVIADDGK 426
             + P L+  P +E                     NV   +   ++CG RH+ VI D G 
Sbjct: 314 MVSSPHLI--PCIESSGKDKSSAFHQGSGAGAQGSNVTGSYVMDIACGGRHSVVITDAGA 371

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLAV 474
           +  +GW  YGQ G G+  D+  P+ V ++ G     +A G WHTL ++V
Sbjct: 372 LLTFGWGLYGQCGQGNNADQLRPTLVPSLLGTRVEKIAAGLWHTLCVSV 420


>gi|413951960|gb|AFW84609.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 552

 Score =  600 bits (1548), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 304/443 (68%), Positives = 365/443 (82%), Gaps = 9/443 (2%)

Query: 2   NGEGQEEKMERVVFMWGYLPGALPQRSPILSPLVVRLPLTVGSA----WRDVCGGGCGFA 57
            GEG   K ERVV MWGYLPG  PQRSP+L P+ VRLP T  +A    WRDVCGGGCGFA
Sbjct: 112 QGEGAGNK-ERVVLMWGYLPGVSPQRSPLLGPVPVRLPPTAATAAGDGWRDVCGGGCGFA 170

Query: 58  MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGG 117
           MAIS+S KL+TWGS DD+GQSYVT+GKH E PE FPLP+   IV+A AGWAHCVA+T+  
Sbjct: 171 MAISESGKLLTWGSADDMGQSYVTAGKHEETPEAFPLPSSVVIVRADAGWAHCVAITDEY 230

Query: 118 EVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTD 177
           +VYTWGWKECVP+GRV GD S+   ++KD  ERQ +  T+QVSPRSQVSR+S G ++G+ 
Sbjct: 231 DVYTWGWKECVPTGRVIGDQSSVGTMEKD--ERQMAMATDQVSPRSQVSRTSSGAAAGSS 288

Query: 178 GRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS 237
                ++ +KRR++SLAK   ESS+S DE+LSA PC+VT + GV+I  VAAGGRHTLALS
Sbjct: 289 ESRGTDDSTKRRKLSLAKHGPESSTSSDESLSAPPCVVTFSTGVKIVAVAAGGRHTLALS 348

Query: 238 DIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESS-YGKDRSAALSRGSVNSEGPGFR 296
           D+GQVWGWGYGGEGQLGLGSRIR VSSPHP+PCIES+ Y KDR +A+ +G+  +EG   +
Sbjct: 349 DLGQVWGWGYGGEGQLGLGSRIRTVSSPHPVPCIESALYTKDRPSAM-KGNKAAEGHVSK 407

Query: 297 VPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG 356
           V GN V+ IACGGRHSAV+TD+GALLTFGWGLYGQCGQG+TDD LSP CVSS+LGI+++ 
Sbjct: 408 VLGNCVRAIACGGRHSAVVTDSGALLTFGWGLYGQCGQGNTDDVLSPTCVSSILGIKMQD 467

Query: 357 VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR 416
           VAAGLWHT+C S DGDVY+FGGNQFGQLGTG DQAETLP+L+DA SLEN +++SVSCGAR
Sbjct: 468 VAAGLWHTVCTSVDGDVYSFGGNQFGQLGTGSDQAETLPKLVDATSLENKNARSVSCGAR 527

Query: 417 HTAVIADDGKVFCWGWNKYGQLG 439
           H+A+I D+G+VFCWGWNKYGQ+G
Sbjct: 528 HSAIITDEGEVFCWGWNKYGQVG 550



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 131/308 (42%), Gaps = 46/308 (14%)

Query: 196 QTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGL 255
           Q+  ++   +E   AFP    L   V I    AG  H +A++D   V+ WG+      G 
Sbjct: 190 QSYVTAGKHEETPEAFP----LPSSVVIVRADAGWAHCVAITDEYDVYTWGWKECVPTG- 244

Query: 256 GSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVI 315
               R++     +  +E     +R  A++   V+      R       G A G   S   
Sbjct: 245 ----RVIGDQSSVGTMEKD---ERQMAMATDQVSPRSQVSRT----SSGAAAGSSESRGT 293

Query: 316 TDAGALLTFGWGLYG-QCGQGSTDDELSPNCVSSL-LGIQIEGVAAGLWHTICISSDGDV 373
            D+          +G +    S +   +P CV +   G++I  VAAG  HT+ +S  G V
Sbjct: 294 DDSTKRRKLSLAKHGPESSTSSDESLSAPPCVVTFSTGVKIVAVAAGGRHTLALSDLGQV 353

Query: 374 YAFGGNQFGQLGTGGDQAETLPRLLDAPSLEN-VHSK----------------------- 409
           + +G    GQLG G  +  T+      P +E+ +++K                       
Sbjct: 354 WGWGYGGEGQLGLG-SRIRTVSSPHPVPCIESALYTKDRPSAMKGNKAAEGHVSKVLGNC 412

Query: 410 --SVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGW 466
             +++CG RH+AV+ D G +  +GW  YGQ G G+  D   P+ V +I G   ++VA G 
Sbjct: 413 VRAIACGGRHSAVVTDSGALLTFGWGLYGQCGQGNTDDVLSPTCVSSILGIKMQDVAAGL 472

Query: 467 WHTLLLAV 474
           WHT+  +V
Sbjct: 473 WHTVCTSV 480



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 90/204 (44%), Gaps = 32/204 (15%)

Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGS-------------------TDD 339
           G  +  +A GGRH+  ++D G +  +G+G  GQ G GS                   T D
Sbjct: 331 GVKIVAVAAGGRHTLALSDLGQVWGWGYGGEGQLGLGSRIRTVSSPHPVPCIESALYTKD 390

Query: 340 ELSP--------NCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
             S           VS +LG  +  +A G  H+  ++  G +  FG   +GQ G G    
Sbjct: 391 RPSAMKGNKAAEGHVSKVLGNCVRAIACGGRHSAVVTDSGALLTFGWGLYGQCGQGNTDD 450

Query: 392 ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
              P  +   S+  +  + V+ G  HT   + DG V+ +G N++GQLG G      +P  
Sbjct: 451 VLSPTCVS--SILGIKMQDVAAGLWHTVCTSVDGDVYSFGGNQFGQLGTGSDQAETLPKL 508

Query: 452 V---TIEGCVPRNVACGWWHTLLL 472
           V   ++E    R+V+CG  H+ ++
Sbjct: 509 VDATSLENKNARSVSCGARHSAII 532


>gi|222619534|gb|EEE55666.1| hypothetical protein OsJ_04066 [Oryza sativa Japonica Group]
          Length = 418

 Score =  599 bits (1544), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 290/422 (68%), Positives = 354/422 (83%), Gaps = 6/422 (1%)

Query: 58  MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGG 117
           MAIS+S KL+TWGS DD+GQSYVT+GKH E PE FPLP++ +IV+A AGWAHCVA+T+ G
Sbjct: 1   MAISESGKLLTWGSADDMGQSYVTAGKHEETPEAFPLPSDVAIVRADAGWAHCVAITDEG 60

Query: 118 EVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSG-T 176
           +VYTWGWKECVP+GRV  D S+G  L+KD  ERQS+   +QVSPRSQVSR+S G +SG +
Sbjct: 61  DVYTWGWKECVPTGRVISDQSSGGTLEKD--ERQSAIAADQVSPRSQVSRTSSGAASGPS 118

Query: 177 DGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLAL 236
           + RG+ ++ +KRRR+S  K   ESS+S DENLSA PC+VT N GV+I  VAAGGRHTLAL
Sbjct: 119 ESRGT-DDSTKRRRLSSTKHAPESSTSSDENLSAPPCVVTFNTGVKIMAVAAGGRHTLAL 177

Query: 237 SDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESS-YGKDRSAALSRGSVNSEGPGF 295
           SD+GQVWGWGYGGEGQLGLGSRIR VSSPHPIPCIES+ Y KDR AA+ +G+ ++E    
Sbjct: 178 SDLGQVWGWGYGGEGQLGLGSRIRTVSSPHPIPCIESALYSKDRPAAM-KGNKSAEVQIS 236

Query: 296 RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
           +V GN VK IACGGRHSAV+TD+GALLTFGWGLYGQCGQG+TDD LSP CVSS+LG++++
Sbjct: 237 KVMGNCVKAIACGGRHSAVVTDSGALLTFGWGLYGQCGQGNTDDVLSPTCVSSILGVKMQ 296

Query: 356 GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGA 415
            + AGLWHT+C S DGDVY+FGGNQFGQLGTG DQAET+P+L+DA SLEN ++++VSCGA
Sbjct: 297 DIGAGLWHTVCTSVDGDVYSFGGNQFGQLGTGSDQAETVPKLVDASSLENKNARAVSCGA 356

Query: 416 RHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAVP 475
           RH+A+I D+G+VFCWGWNKYGQLGLGD +DRN+P  V ++   P NV+CGWWHTL+LA  
Sbjct: 357 RHSAIITDEGEVFCWGWNKYGQLGLGDSMDRNVPCSVPVDAYHPLNVSCGWWHTLVLAES 416

Query: 476 PT 477
           PT
Sbjct: 417 PT 418


>gi|334185962|ref|NP_190951.2| Regulator of chromosome condensation (RCC1) family protein
           [Arabidopsis thaliana]
 gi|332645627|gb|AEE79148.1| Regulator of chromosome condensation (RCC1) family protein
           [Arabidopsis thaliana]
          Length = 472

 Score =  596 bits (1536), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 296/469 (63%), Positives = 352/469 (75%), Gaps = 18/469 (3%)

Query: 13  VVFMWGYLPGALPQRSPILSPLVVRLPLTV--GSAWRDVCGGGCGFAMAISDSRKLITWG 70
           VV+M GYLPGA  ++SPILSP+ VRL   V  G +W+DVCGGGCGFAMAIS+  KLITWG
Sbjct: 18  VVYMSGYLPGAASEKSPILSPVPVRLSAAVHGGDSWKDVCGGGCGFAMAISEKGKLITWG 77

Query: 71  STDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPS 130
           STDD GQSYV SGKHGE PEPFPLPTEA +V+A++GWAHC  VTE GE +TWGWKEC+PS
Sbjct: 78  STDDEGQSYVASGKHGETPEPFPLPTEAPVVQASSGWAHCAVVTETGEAFTWGWKECIPS 137

Query: 131 GRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRR 190
                         KD   +Q S  +EQ    SQ S ++ GT+   + +  GEE  KRRR
Sbjct: 138 --------------KDPVGKQQSGSSEQGDIASQGSNAASGTTLQNENQKVGEESVKRRR 183

Query: 191 ISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGE 250
           +S AK   E  +SG +  +  P LV++  GVRI +VA GGRHTLALSD+GQ+WGWGYGGE
Sbjct: 184 VSTAKDETEGHTSGGDFFATTPSLVSVGLGVRITSVATGGRHTLALSDLGQIWGWGYGGE 243

Query: 251 GQLGLGSRIRMVSSPHPIPCIES-SYGKDRSAALSRG-SVNSEGPGFRVPGNYVKGIACG 308
           GQLGLGSRI+MVSSPH IPC+ES   GK+RS  L +G +  +     R PG Y+K I+CG
Sbjct: 244 GQLGLGSRIKMVSSPHLIPCLESIGSGKERSFILHQGGTTTTSAQASREPGQYIKAISCG 303

Query: 309 GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICIS 368
           GRHSA ITDAG L+TFGWGLYGQCG G+T+D+L P  VS +  +++E VAAGLWHTICIS
Sbjct: 304 GRHSAAITDAGGLITFGWGLYGQCGHGNTNDQLRPMAVSEVKSVRMESVAAGLWHTICIS 363

Query: 369 SDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVF 428
           SDG VYAFGGNQFGQLGTG D AE LPRLLD  +LE  H+K+VSCGARH+AV+A+DG++ 
Sbjct: 364 SDGKVYAFGGNQFGQLGTGTDHAEILPRLLDGQNLEGKHAKAVSCGARHSAVLAEDGQLL 423

Query: 429 CWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAVPPT 477
           CWGWNKYGQLGLGD  DRNIP+QV ++GC  R VACGWWHTLLL   PT
Sbjct: 424 CWGWNKYGQLGLGDTNDRNIPTQVQLDGCRLRKVACGWWHTLLLGDSPT 472


>gi|218189368|gb|EEC71795.1| hypothetical protein OsI_04422 [Oryza sativa Indica Group]
          Length = 427

 Score =  595 bits (1535), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 288/425 (67%), Positives = 353/425 (83%), Gaps = 6/425 (1%)

Query: 55  GFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVT 114
           G+  A + S KL+TWGS DD+GQSYVT+GKH E PE FPLP++ +IV+A AGWAHCVA+T
Sbjct: 7   GWLAAAAQSGKLLTWGSADDMGQSYVTAGKHEETPEAFPLPSDVAIVRADAGWAHCVAIT 66

Query: 115 EGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSS 174
           + G+VYTWGWKECVP+GRV  D S+G  L+KD  ERQS+   +QVSPRSQVSR+S G +S
Sbjct: 67  DEGDVYTWGWKECVPTGRVISDQSSGGTLEKD--ERQSAIAADQVSPRSQVSRTSSGAAS 124

Query: 175 G-TDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHT 233
           G ++ RG+ ++ +KRRR+S  K   ESS+S DENLSA PC+VT N GV+I  VAAGGRHT
Sbjct: 125 GPSESRGT-DDSTKRRRLSSTKHAPESSTSSDENLSAPPCVVTFNTGVKIMAVAAGGRHT 183

Query: 234 LALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESS-YGKDRSAALSRGSVNSEG 292
           LALSD+GQVWGWGYGGEGQLGLGSRIR VSSPHPIPCIES+ Y KDR AA+ +G+ ++E 
Sbjct: 184 LALSDLGQVWGWGYGGEGQLGLGSRIRTVSSPHPIPCIESALYSKDRPAAM-KGNKSAEA 242

Query: 293 PGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGI 352
              +V GN VK IACGGRHSAV+TD+GALLTFGWGLYGQCGQG+TDD LSP CVSS+LG+
Sbjct: 243 QISKVMGNCVKAIACGGRHSAVVTDSGALLTFGWGLYGQCGQGNTDDVLSPTCVSSILGV 302

Query: 353 QIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVS 412
           +++ + AGLWHT+C S DGDVY+FGGNQFGQLGTG DQAET+P+L+DA SLEN ++++VS
Sbjct: 303 KMQDIGAGLWHTVCTSVDGDVYSFGGNQFGQLGTGSDQAETVPKLVDASSLENKNARAVS 362

Query: 413 CGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           CGARH+A+I D+G+VFCWGWNKYGQLGLGD +DRN+P  V ++   P NV+CGWWHTL+L
Sbjct: 363 CGARHSAIITDEGEVFCWGWNKYGQLGLGDSMDRNVPCSVPVDAYHPLNVSCGWWHTLVL 422

Query: 473 AVPPT 477
           A  PT
Sbjct: 423 AESPT 427


>gi|7630003|emb|CAB88345.1| putative protein [Arabidopsis thaliana]
          Length = 487

 Score =  586 bits (1510), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 296/484 (61%), Positives = 352/484 (72%), Gaps = 33/484 (6%)

Query: 13  VVFMWGYLPGALPQRSPILSPLVVRLPLTV--GSAWRDVCGGGCGFAMAISDSRKLITWG 70
           VV+M GYLPGA  ++SPILSP+ VRL   V  G +W+DVCGGGCGFAMAIS+  KLITWG
Sbjct: 18  VVYMSGYLPGAASEKSPILSPVPVRLSAAVHGGDSWKDVCGGGCGFAMAISEKGKLITWG 77

Query: 71  STDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPS 130
           STDD GQSYV SGKHGE PEPFPLPTEA +V+A++GWAHC  VTE GE +TWGWKEC+PS
Sbjct: 78  STDDEGQSYVASGKHGETPEPFPLPTEAPVVQASSGWAHCAVVTETGEAFTWGWKECIPS 137

Query: 131 GRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRR 190
                         KD   +Q S  +EQ    SQ S ++ GT+   + +  GEE  KRRR
Sbjct: 138 --------------KDPVGKQQSGSSEQGDIASQGSNAASGTTLQNENQKVGEESVKRRR 183

Query: 191 ISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS------------- 237
           +S AK   E  +SG +  +  P LV++  GVRI +VA GGRHTLALS             
Sbjct: 184 VSTAKDETEGHTSGGDFFATTPSLVSVGLGVRITSVATGGRHTLALSVEDSFEDDHVFTE 243

Query: 238 --DIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES-SYGKDRSAALSRG-SVNSEGP 293
             D+GQ+WGWGYGGEGQLGLGSRI+MVSSPH IPC+ES   GK+RS  L +G +  +   
Sbjct: 244 VSDLGQIWGWGYGGEGQLGLGSRIKMVSSPHLIPCLESIGSGKERSFILHQGGTTTTSAQ 303

Query: 294 GFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ 353
             R PG Y+K I+CGGRHSA ITDAG L+TFGWGLYGQCG G+T+D+L P  VS +  ++
Sbjct: 304 ASREPGQYIKAISCGGRHSAAITDAGGLITFGWGLYGQCGHGNTNDQLRPMAVSEVKSVR 363

Query: 354 IEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSC 413
           +E VAAGLWHTICISSDG VYAFGGNQFGQLGTG D AE LPRLLD  +LE  H+K+VSC
Sbjct: 364 MESVAAGLWHTICISSDGKVYAFGGNQFGQLGTGTDHAEILPRLLDGQNLEGKHAKAVSC 423

Query: 414 GARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GARH+AV+A+DG++ CWGWNKYGQLGLGD  DRNIP+QV ++GC  R VACGWWHTLLL 
Sbjct: 424 GARHSAVLAEDGQLLCWGWNKYGQLGLGDTNDRNIPTQVQLDGCRLRKVACGWWHTLLLG 483

Query: 474 VPPT 477
             PT
Sbjct: 484 DSPT 487


>gi|297816690|ref|XP_002876228.1| hypothetical protein ARALYDRAFT_485777 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322066|gb|EFH52487.1| hypothetical protein ARALYDRAFT_485777 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 487

 Score =  579 bits (1492), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 296/484 (61%), Positives = 352/484 (72%), Gaps = 33/484 (6%)

Query: 13  VVFMWGYLPGALPQRSPILSPLVVRLPLTV--GSAWRDVCGGGCGFAMAISDSRKLITWG 70
           VV+M GYLPGA P++SPILSP+ VRLP  V  G +W+DVCGGGCGFAMAIS+  KLITWG
Sbjct: 18  VVYMSGYLPGAAPEKSPILSPVPVRLPAAVHGGDSWKDVCGGGCGFAMAISEKGKLITWG 77

Query: 71  STDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPS 130
           STDD GQSYV SGKHGE PE FPLPTEA +V+A++GWAHC  VTE GE +TWGWKEC+PS
Sbjct: 78  STDDEGQSYVASGKHGETPELFPLPTEAPVVQASSGWAHCAVVTEAGEAFTWGWKECIPS 137

Query: 131 GRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRR 190
                         KD   +Q S  +EQ    SQ S ++ G +   + R  GE+  KRRR
Sbjct: 138 --------------KDPVGKQQSGSSEQGEIASQGSNAASGMTLQNETRKVGEDSVKRRR 183

Query: 191 ISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS------------- 237
           +S AK   E  +SG +  +  P LV++  GVRI +VA GGRHTLALS             
Sbjct: 184 VSTAKDETEGHTSGGDFFATAPSLVSVGLGVRITSVATGGRHTLALSVEDSFEDDHVFAE 243

Query: 238 --DIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES-SYGKDRSAALSRGSVNSEGPG 294
             DIGQ+WGWGYGGEGQLGLGSRI+MVSSPH IPC+ES   GK+RS  L +G   +    
Sbjct: 244 VSDIGQIWGWGYGGEGQLGLGSRIKMVSSPHLIPCLESIGSGKERSFILHQGGTTTTSTQ 303

Query: 295 F-RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ 353
             R PG Y+K I+CGGRHSA ITDAG L+TFGWGLYGQCG G+T+D+L P  VSS+  ++
Sbjct: 304 VSREPGRYIKAISCGGRHSAAITDAGGLITFGWGLYGQCGHGNTNDQLRPMAVSSMKSVR 363

Query: 354 IEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSC 413
           +E VAAGLWHTICISSDG VYAFGGNQFGQLGTG D AE LPRLL   +LE  ++K+VSC
Sbjct: 364 MESVAAGLWHTICISSDGKVYAFGGNQFGQLGTGTDHAEILPRLLGGQNLEGKYAKAVSC 423

Query: 414 GARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GARH+AV+A+DG++ CWGWNKYGQLGLGD  DR+IP+QV ++GC  R VACGWWHTLLLA
Sbjct: 424 GARHSAVLAEDGQLLCWGWNKYGQLGLGDTNDRSIPTQVQLDGCRLRKVACGWWHTLLLA 483

Query: 474 VPPT 477
             PT
Sbjct: 484 DIPT 487


>gi|224138854|ref|XP_002322918.1| predicted protein [Populus trichocarpa]
 gi|222867548|gb|EEF04679.1| predicted protein [Populus trichocarpa]
          Length = 467

 Score =  570 bits (1470), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 291/471 (61%), Positives = 344/471 (73%), Gaps = 24/471 (5%)

Query: 7   EEKMERVVFMWGYLPGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKL 66
           EE  +  V+MWGYLPG  P++SPIL+P+ V  P     +W+DVCGGGCGFAMAIS+  KL
Sbjct: 17  EEGKKATVYMWGYLPGVSPEKSPILNPISVNYP-DADDSWKDVCGGGCGFAMAISEGGKL 75

Query: 67  ITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKE 126
           +TWGS DD  QSYVT GKHGE PE F LP+EASI+KAAA         + GE+YTWGWKE
Sbjct: 76  VTWGSADDENQSYVTCGKHGETPEAFLLPSEASILKAAA---------DTGELYTWGWKE 126

Query: 127 CVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGS 186
           CVP G+   D ++   L KD   +Q+   TEQVS            S+ +D + +GEE  
Sbjct: 127 CVPLGKFPRDGASWGALQKDNAAKQNVLSTEQVS------------SASSDDKRNGEEIV 174

Query: 187 KRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWG 246
           KRRR+SL K+  E+S  GDE  +  P +V+L PGVRI +VAAGGRHTLALSD GQVWGWG
Sbjct: 175 KRRRVSL-KEENENSEYGDEYFTVTPAIVSLGPGVRITSVAAGGRHTLALSDTGQVWGWG 233

Query: 247 YGGEGQLGLGSRIRMVSSPHPIPCIES-SYGKDRSAALSRGSVNSEGPGFRVPGNYVKGI 305
           YGGEGQLGLGSR++MVSSPH IP  E  + GK RS+ +  GS N        PG+YVK I
Sbjct: 234 YGGEGQLGLGSRVKMVSSPHLIPFTEQPTTGKHRSSVVHNGSTNLPAQVSNFPGSYVKEI 293

Query: 306 ACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTI 365
           ACGGRHSAV+TDAG LLTFGWGLYGQCG GST+D+L P  + SL GIQIE +AAGLWHT+
Sbjct: 294 ACGGRHSAVVTDAGTLLTFGWGLYGQCGHGSTNDQLRPTSLPSLSGIQIERIAAGLWHTM 353

Query: 366 CISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDG 425
           CI+ DG VY FGGNQFGQLGTG  Q ETLPRLL+ P LE+   K VSCGARH+A++ +DG
Sbjct: 354 CITIDGRVYVFGGNQFGQLGTGASQGETLPRLLEDPCLESKLVKMVSCGARHSAILLEDG 413

Query: 426 KVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAVPP 476
           +VF WGWNKYGQLG+GD IDRN P+QV IEGC P+ VACGWWHTLLLA  P
Sbjct: 414 QVFSWGWNKYGQLGVGDSIDRNTPTQVPIEGCRPKMVACGWWHTLLLAETP 464


>gi|414879725|tpg|DAA56856.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 431

 Score =  529 bits (1362), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 276/435 (63%), Positives = 337/435 (77%), Gaps = 36/435 (8%)

Query: 75  LGQSYVTSGKH-----------------------------GEIPEPFPLPTEASIVKAAA 105
           +GQSYVT+GKH                              E PE FPLP   +IV+A A
Sbjct: 1   MGQSYVTAGKHEVITLMLSCFPAPCEKVQDLLLKIEYYTSQETPEAFPLPRGVAIVRADA 60

Query: 106 GWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQ-VSPRSQ 164
           GWAHCVA+T+ G+VYTWGWKECVP+GRV GD S+    +KD  ERQ +  T+Q VSPRSQ
Sbjct: 61  GWAHCVAITDEGDVYTWGWKECVPTGRVIGDQSSVGTKEKD--ERQMAMATDQGVSPRSQ 118

Query: 165 VSRSSGGTSSG-TDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRI 223
           VSR+S G +SG ++ RG+ ++ +KRRR+S AK   ESS+S DE+LSA PC+VT N GV+I
Sbjct: 119 VSRTSSGAASGPSESRGT-DDSTKRRRLSSAKHGPESSTSSDESLSAPPCVVTFNTGVKI 177

Query: 224 ATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESS-YGKDRSAA 282
            +VAAGGRHTLALSD+GQVWGWGYGGEGQLGLGSRIR VSSPHP+PCIES+ Y KDR +A
Sbjct: 178 VSVAAGGRHTLALSDLGQVWGWGYGGEGQLGLGSRIRTVSSPHPVPCIESALYSKDRPSA 237

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
           + +G+  +EG   +V GN V+ IACGGRHSA +TD+GALLTFGWGLYGQCGQG+TDD LS
Sbjct: 238 M-KGNKAAEGHVSKVLGNCVRAIACGGRHSAAVTDSGALLTFGWGLYGQCGQGNTDDVLS 296

Query: 343 PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPS 402
           P CVSS+LG +++ VAAGLWHT+C S DGDVY+FGGNQFGQLGTG DQAET+P+L+DA S
Sbjct: 297 PTCVSSILGSKMQDVAAGLWHTVCTSVDGDVYSFGGNQFGQLGTGSDQAETVPKLVDATS 356

Query: 403 LENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNV 462
           LEN +++SVSCGARH+A+I D+G+VFCWGWNKYGQLGLGD +DRN+P  V ++   P NV
Sbjct: 357 LENKNARSVSCGARHSAIITDEGEVFCWGWNKYGQLGLGDSMDRNVPCSVPVDAYHPLNV 416

Query: 463 ACGWWHTLLLAVPPT 477
           +CGWWHTL+LA  PT
Sbjct: 417 SCGWWHTLVLADSPT 431


>gi|168016500|ref|XP_001760787.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162688147|gb|EDQ74526.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 445

 Score =  491 bits (1263), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 260/464 (56%), Positives = 322/464 (69%), Gaps = 34/464 (7%)

Query: 16  MWGYLPGALPQRSPILSPLVVRLPLT-VGSAWRDVCGGGCGFAMAISDSRKLITWGSTDD 74
           MWGYLP A PQR+P+L P  V  P+T +    + VC GGCGF +AIS+S KL TWGST +
Sbjct: 1   MWGYLPAASPQRAPLLQPTPV--PVTPLNDPLKTVCNGGCGFGIAISESGKLNTWGSTTE 58

Query: 75  LGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVF 134
           LGQ Y+ SGK  E+PEP+PLPTE+ IV+AA GWAHC AVT GGEV+TWGW ECVPS +  
Sbjct: 59  LGQCYLISGKQQELPEPYPLPTESPIVQAAGGWAHCAAVTGGGEVFTWGWSECVPSIQPT 118

Query: 135 GDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLA 194
            D S     D     +QS           Q  R+   T   TD +G+ E   KR+ +S  
Sbjct: 119 PDESEQVQGDDASACKQSG---------RQTHRNL--TCKTTDSKGAEEILKKRKIVSFE 167

Query: 195 K-QTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSD------IGQVWGWGY 247
             ++ ES ++ +EN+ A PCLV L+PG+RI+ VAAGGRHTLALS       +G VWGWGY
Sbjct: 168 HGESPESPTAAEENVFAPPCLVNLDPGIRISIVAAGGRHTLALSGEFSFKYVGHVWGWGY 227

Query: 248 GGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIAC 307
           GGEGQLGLG+R+R+VSSP  IPC  S      S+            G  +PG+ +K IAC
Sbjct: 228 GGEGQLGLGTRMRIVSSPQLIPCFNSPENGISSS------------GAPIPGSSIKAIAC 275

Query: 308 GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI 367
           GGRHSA++TDAGALLTFGWGLYGQ GQGS +DELSP  VS++ G+Q+ G+AAGLWHT+CI
Sbjct: 276 GGRHSAIVTDAGALLTFGWGLYGQVGQGSNEDELSPCLVSAMGGLQVTGIAAGLWHTLCI 335

Query: 368 SSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKV 427
           +  GDVYAFGGNQFGQLG GG+ AE  PRL+DAP LE+    +V+CGARH+ V+   GK+
Sbjct: 336 TDIGDVYAFGGNQFGQLGVGGNSAEMSPRLIDAPLLEDESCVAVACGARHSVVLTGSGKI 395

Query: 428 FCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACGWWHTL 470
           F WGWNKYGQLGLGD  +R++P QVT+ +G    N+ACGWWHTL
Sbjct: 396 FAWGWNKYGQLGLGDNNNRDLPVQVTMNDGGRAANIACGWWHTL 439


>gi|168037867|ref|XP_001771424.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162677342|gb|EDQ63814.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 465

 Score =  480 bits (1235), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 253/461 (54%), Positives = 324/461 (70%), Gaps = 27/461 (5%)

Query: 16  MWGYLPGALPQRSPILSPLVVRLPLT-VGSAWRDVCGGGCGFAMAISDSRKLITWGSTDD 74
           MWGYLP A PQR+P+L P +V  P+T +    + VC GGCGF + IS+S KL TWGST +
Sbjct: 1   MWGYLPAASPQRTPLLHPTLV--PITALDDPLKIVCNGGCGFGIGISESGKLNTWGSTTE 58

Query: 75  LGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVF 134
           LGQ Y+ SGK  E+PEP+ LPT++ I++AA GWAHC AVT  GEVYTWGW ECVPS    
Sbjct: 59  LGQCYLISGKQQEVPEPYLLPTDSPIIQAAGGWAHCAAVTGNGEVYTWGWSECVPS-VTL 117

Query: 135 GDLSTGTGLDKDVFERQSSFLTEQVSPRSQV--SRSSGGTSSGTDGRGSGEEGSKRRRIS 192
             +     + +D         + Q+  R+ V  +RS    SS        EE  K+R++ 
Sbjct: 118 NAVEESEQVQEDDIPPDVPGTSLQLLSRNNVNAARSEPLPSSVV------EEVLKKRKVV 171

Query: 193 LAKQ--TAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGE 250
             +   + ES ++ DEN+ + P LV L+ G+RIA+VAAGGRHTLALSD+G VW WGYGG+
Sbjct: 172 SFEDGGSPESPTAADENVFSPPFLVNLDAGIRIASVAAGGRHTLALSDVGHVWAWGYGGD 231

Query: 251 GQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGR 310
           GQLGLGSR+R+VSSP  IPC+  +   +++ A S         G  +PG  +K IACGGR
Sbjct: 232 GQLGLGSRMRIVSSPQQIPCLNLT---EKAVARS---------GVPIPGKCIKAIACGGR 279

Query: 311 HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
           HSAV+TDAGALLTFGWGL+GQ GQGST+DELSP CVS++ G++I G+AAGLWHT+CI+  
Sbjct: 280 HSAVVTDAGALLTFGWGLHGQVGQGSTEDELSPCCVSTIGGLRIVGIAAGLWHTLCITDV 339

Query: 371 GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
           GDVYAFGGNQFGQLG GG+ AE  PR++DAP LE+     V+CGARH+AV+   GK+F W
Sbjct: 340 GDVYAFGGNQFGQLGVGGNAAELSPRMIDAPLLEDESCVEVACGARHSAVLTGSGKIFAW 399

Query: 431 GWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACGWWHTL 470
           GWNKYGQLGLGD  +R++P QVT+ +G    ++ACGWWHTL
Sbjct: 400 GWNKYGQLGLGDCNNRDLPVQVTMNDGGRAASIACGWWHTL 440



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 50/145 (34%), Positives = 69/145 (47%), Gaps = 16/145 (11%)

Query: 343 PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPS 402
           P  V+   GI+I  VAAG  HT+ +S  G V+A+G    GQLG G  +   +      P 
Sbjct: 193 PFLVNLDAGIRIASVAAGGRHTLALSDVGHVWAWGYGGDGQLGLG-SRMRIVSSPQQIPC 251

Query: 403 LENVHS--------------KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNI 448
           L                   K+++CG RH+AV+ D G +  +GW  +GQ+G G   D   
Sbjct: 252 LNLTEKAVARSGVPIPGKCIKAIACGGRHSAVVTDAGALLTFGWGLHGQVGQGSTEDELS 311

Query: 449 PSQV-TIEGCVPRNVACGWWHTLLL 472
           P  V TI G     +A G WHTL +
Sbjct: 312 PCCVSTIGGLRIVGIAAGLWHTLCI 336


>gi|302793045|ref|XP_002978288.1| hypothetical protein SELMODRAFT_108548 [Selaginella moellendorffii]
 gi|300154309|gb|EFJ20945.1| hypothetical protein SELMODRAFT_108548 [Selaginella moellendorffii]
          Length = 454

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 263/469 (56%), Positives = 319/469 (68%), Gaps = 31/469 (6%)

Query: 14  VFMWGYLPGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTD 73
           V MWGYLP + PQRSPI+ P  V  P +    WR VC GGCGFA+A+S+S KL TWGSTD
Sbjct: 11  VRMWGYLPASSPQRSPIVVPTKVS-PASPDDGWRAVCSGGCGFALALSESGKLHTWGSTD 69

Query: 74  DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRV 133
           DLGQ Y  SGKH E PEPFPL T  +I  AAAGWAHC  VTE GEVYTWGWKECVPS + 
Sbjct: 70  DLGQCYHISGKHQEHPEPFPLQTPPAIF-AAAGWAHCAVVTETGEVYTWGWKECVPSDKN 128

Query: 134 FGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISL 193
             +     G+  D ++ Q    TE++        SS G S   + R    + SK+R++S 
Sbjct: 129 CVE----QGVSGDPYDYQGR--TEELKHVEPDLDSSPGHSP--EAR---LDSSKKRKVST 177

Query: 194 AKQTAESSSSG--DENLSAFPCLVTLNPGVRIATVAAGGRHTLALS----DIGQVWGWGY 247
            +  +  S     DE + A  C V +    ++  VA GGRHTLAL+      GQVW WGY
Sbjct: 178 DEAGSPDSPGAGVDEAVVAPLCCVPMP--AKVILVATGGRHTLALTGKFFHTGQVWSWGY 235

Query: 248 GGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIAC 307
           GGEGQLGLG+R+R VSSP PIP   S+Y       L +G  N  G   + PG+Y+ GIAC
Sbjct: 236 GGEGQLGLGTRMRTVSSPQPIPLEPSTY------WLRKG--NRAG-AVKPPGSYIVGIAC 286

Query: 308 GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI 367
           GGRHSA++TD GA+LTFGWGLYGQCGQGST+DELSPN VSSL G+ +  +A+GLWHT+CI
Sbjct: 287 GGRHSAILTDGGAVLTFGWGLYGQCGQGSTEDELSPNYVSSLGGLHVTAIASGLWHTLCI 346

Query: 368 SSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKV 427
           +  G+VYAFGGNQFGQLG GGD +ETLP+L++A  LE+  +KSVSCGARH+A+  + GKV
Sbjct: 347 TDTGEVYAFGGNQFGQLGVGGDHSETLPKLVEAAVLEDECAKSVSCGARHSAITTEKGKV 406

Query: 428 FCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAVPP 476
           FCWGWNKYGQLGLGD  DR+ P +V +E     NVACGWWHTL L   P
Sbjct: 407 FCWGWNKYGQLGLGDTGDRDTPHEVPLEHRA-VNVACGWWHTLALTDQP 454


>gi|302765727|ref|XP_002966284.1| hypothetical protein SELMODRAFT_85679 [Selaginella moellendorffii]
 gi|300165704|gb|EFJ32311.1| hypothetical protein SELMODRAFT_85679 [Selaginella moellendorffii]
          Length = 453

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 262/468 (55%), Positives = 317/468 (67%), Gaps = 30/468 (6%)

Query: 14  VFMWGYLPGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTD 73
           V MWGYLP + PQRSPI+ P  V  P +    WR VC GGCGFA+A+S+S KL TWGSTD
Sbjct: 11  VRMWGYLPASSPQRSPIVVPTKVS-PASPDDGWRAVCSGGCGFALALSESGKLHTWGSTD 69

Query: 74  DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRV 133
           DLGQ Y  SGKH E PEPFPL T  +I  AAAGWAHC  VTE GEVYTWGWKECVPS + 
Sbjct: 70  DLGQCYHISGKHQEHPEPFPLQTPPAIF-AAAGWAHCAVVTETGEVYTWGWKECVPSDKN 128

Query: 134 FGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISL 193
             +     G+  D ++ Q    TE++        SS G S       +  + SK+R++S 
Sbjct: 129 CVE----QGVSGDPYDYQGR--TEELKHVEPDLDSSPGHSPE-----ALLDSSKKRKVST 177

Query: 194 AKQTAESSSSG--DENLSAFPCLVTLNPGVRIATVAAGGRHTLALS---DIGQVWGWGYG 248
            +  +  SS    DE + A  C V +    ++  VA GGRHT  L    D GQVW WGYG
Sbjct: 178 DEAGSPDSSGAGVDEAVVAPLCCVPMP--AKVILVATGGRHTFVLFRILDTGQVWSWGYG 235

Query: 249 GEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACG 308
           GEGQLGLG+R+R VSSP PIP   S+Y       L +G  N  G   + PG+Y+ GIACG
Sbjct: 236 GEGQLGLGTRMRTVSSPQPIPLEPSTY------WLRKG--NRAG-AVKPPGSYIVGIACG 286

Query: 309 GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICIS 368
           GRHSA++TD GA+LTFGWGLYGQCGQGST+DELSPN VSSL G+ +  +A+GLWHT+CI+
Sbjct: 287 GRHSAILTDGGAVLTFGWGLYGQCGQGSTEDELSPNYVSSLGGLHVTAIASGLWHTLCIT 346

Query: 369 SDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVF 428
             G+VYAFGGNQFGQLG GGD +ETLP+L++A  LE+  +KSVSCGARH+A+  + GKVF
Sbjct: 347 DTGEVYAFGGNQFGQLGVGGDHSETLPKLVEAAVLEDECAKSVSCGARHSAITTEKGKVF 406

Query: 429 CWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAVPP 476
           CWGWNKYGQLGLGD  DR+ P +V +E     NVACGWWHTL L   P
Sbjct: 407 CWGWNKYGQLGLGDTGDRDTPHEVPLEHRA-VNVACGWWHTLALTDQP 453


>gi|168046566|ref|XP_001775744.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672896|gb|EDQ59427.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 441

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 253/471 (53%), Positives = 312/471 (66%), Gaps = 59/471 (12%)

Query: 11  ERVVFMWGYLPGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWG 70
           E  V MWGYLP A PQR+P+L P  V + + +    + VC GGCGF +AIS+S  L TWG
Sbjct: 13  ECSVRMWGYLPAASPQRTPLLQPTPVPVSV-LNDPLKTVCNGGCGFGIAISESGNLNTWG 71

Query: 71  STDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECV-P 129
           ST D G  Y+ SGK  E+PE +PLPT++ IV AA GWAHC AVT  GEVYTWGW EC  P
Sbjct: 72  STTDHGHCYLISGKQQEVPELYPLPTDSPIVHAAGGWAHCAAVTGDGEVYTWGWSECTKP 131

Query: 130 SGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRR 189
           +G+                               Q  R+    ++G+DG    EE  KRR
Sbjct: 132 TGK-------------------------------QTLRNLACKTTGSDG---AEEVIKRR 157

Query: 190 RISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSD--------IGQ 241
           ++       +S  + +EN  A PCLV L+PG+RI++VAAGGRHTLALSD        +GQ
Sbjct: 158 KVITNSAEGQSPEASEENAFAPPCLVKLDPGIRISSVAAGGRHTLALSDNTNHMETDVGQ 217

Query: 242 VWGWGYGGEGQLGLGSRIRMVSSPHPIPCIE-SSYGKDRSAALSRGSVNSEGPGFRVPGN 300
           VWGWGYGGEGQLGLGS IR+VS P  IPC   +  G  RS             G  +PG+
Sbjct: 218 VWGWGYGGEGQLGLGSCIRIVSFPQHIPCFNMTDTGNARS-------------GVPIPGS 264

Query: 301 YVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAG 360
           Y+K IACGGRHSAVITD GA+LTFGWGLYGQ GQGST+DELSP+ VS+L G+ I G+AAG
Sbjct: 265 YIKAIACGGRHSAVITDTGAVLTFGWGLYGQIGQGSTEDELSPSHVSTLQGLSIVGIAAG 324

Query: 361 LWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
           LWHT+CI++ GDVY+FGGNQFGQLG GG+ AE  PRL+DAP L +  S +V+CGARH+ V
Sbjct: 325 LWHTLCITNTGDVYSFGGNQFGQLGVGGNNAELSPRLIDAPLLGDELSVAVACGARHSVV 384

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACGWWHTL 470
           +   GK+F WGWNKYGQLGLGD  +R++P QVT+ +G    ++ACGWWHTL
Sbjct: 385 LTGSGKIFAWGWNKYGQLGLGDCNNRDLPMQVTMNDGGRAASIACGWWHTL 435



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 84/166 (50%), Gaps = 23/166 (13%)

Query: 330 GQCGQGSTDDELSPNCVSSL-LGIQIEGVAAGLWHTICISSD--------GDVYAFGGNQ 380
           GQ  + S ++  +P C+  L  GI+I  VAAG  HT+ +S +        G V+ +G   
Sbjct: 166 GQSPEASEENAFAPPCLVKLDPGIRISSVAAGGRHTLALSDNTNHMETDVGQVWGWGYGG 225

Query: 381 FGQLGTGG-DQAETLPRLLDAPSLENV------------HSKSVSCGARHTAVIADDGKV 427
            GQLG G   +  + P+ +   ++ +             + K+++CG RH+AVI D G V
Sbjct: 226 EGQLGLGSCIRIVSFPQHIPCFNMTDTGNARSGVPIPGSYIKAIACGGRHSAVITDTGAV 285

Query: 428 FCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLL 472
             +GW  YGQ+G G   D   PS V T++G     +A G WHTL +
Sbjct: 286 LTFGWGLYGQIGQGSTEDELSPSHVSTLQGLSIVGIAAGLWHTLCI 331


>gi|168002036|ref|XP_001753720.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162695127|gb|EDQ81472.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 478

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 255/477 (53%), Positives = 322/477 (67%), Gaps = 41/477 (8%)

Query: 14  VFMWGYLPGALPQRSPILSPLVV-RLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGST 72
           V MWGYLP A PQR+P+L P  V   PL      + VC GGCGF +AIS+S KL TWGST
Sbjct: 17  VRMWGYLPAASPQRAPLLQPTPVPSTPLN--DPLKMVCNGGCGFGIAISESGKLNTWGST 74

Query: 73  DDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGR 132
            +LGQ Y+ SGK  E+PEP+ LPTE+ I++AA GWAHC AVT  GEVYTWGW ECVP+ +
Sbjct: 75  TELGQCYLISGKQQEVPEPYSLPTESPIIQAAGGWAHCAAVTGDGEVYTWGWSECVPNIK 134

Query: 133 VFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRIS 192
              D +     D       ++ L  + + R+   ++S       + +G+ E   KR+ +S
Sbjct: 135 SNPDETEQAQGDDTSPSGPNTSLHGRQNHRNLTCKTS-------ESKGAEEVLKKRKVVS 187

Query: 193 LAKQ-TAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDI------------ 239
              + + ES ++ +EN+ A PCLV L+PG+RI+TVAAGGRHTLALS +            
Sbjct: 188 FEDRGSPESPTAAEENVFAPPCLVILDPGIRISTVAAGGRHTLALSGMYSFSYDLIFPHF 247

Query: 240 ----GQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF 295
                 V+GWGYGGEGQLGLGSR R+VS+P  +PC  S         L  G    E    
Sbjct: 248 GNIYSHVYGWGYGGEGQLGLGSRTRIVSTPQRVPCFSS---------LENGVTIGEA--- 295

Query: 296 RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ-CGQGSTDDELSPNCVSSLLGIQI 354
            +PG+ V  IACGGRHSAVITDAGALLTFGWGLYGQ  GQGST+DELSP  VS++ G+++
Sbjct: 296 SIPGSCVTRIACGGRHSAVITDAGALLTFGWGLYGQQVGQGSTEDELSPCLVSAMRGLRV 355

Query: 355 EGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
            G+AAGLWHT+CI+  GDVYAFGGNQFGQLG GG+ AET PRL+DAP LE+  S +V+CG
Sbjct: 356 VGIAAGLWHTLCITDIGDVYAFGGNQFGQLGVGGNTAETSPRLVDAPLLEDETSVAVACG 415

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACGWWHTL 470
           ARH+ V+   GK+F WGWNKYGQLGLGD  +R++P QVT+ +G    ++ACGWWHTL
Sbjct: 416 ARHSVVLTGSGKIFAWGWNKYGQLGLGDSNNRDLPVQVTMNDGGRAASIACGWWHTL 472


>gi|357460951|ref|XP_003600757.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355489805|gb|AES71008.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 260

 Score =  450 bits (1157), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 216/267 (80%), Positives = 239/267 (89%), Gaps = 7/267 (2%)

Query: 211 FPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPC 270
            PCLVTLNPGV+I +VAAGGRHTL LSDIGQVWGWGYGGEGQLGLGSR+RMVSSPH IPC
Sbjct: 1   MPCLVTLNPGVKITSVAAGGRHTLVLSDIGQVWGWGYGGEGQLGLGSRVRMVSSPHIIPC 60

Query: 271 IESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
           I+SS       +L +GS++SEG  FR+PG+ +K IACGGRHSAVITDAGA+L FGWGLYG
Sbjct: 61  IDSS-------SLVQGSMSSEGHNFRIPGSCIKAIACGGRHSAVITDAGAVLAFGWGLYG 113

Query: 331 QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
           QCGQGSTDDELSP CVSSLLGIQIEGVAAGLWHT+C S+DGDVYAFGGNQFGQLGTG DQ
Sbjct: 114 QCGQGSTDDELSPTCVSSLLGIQIEGVAAGLWHTVCTSADGDVYAFGGNQFGQLGTGSDQ 173

Query: 391 AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
           AETLPRLLD PSLENV+ K++SCGARHTA++ D+GKVF WGWNKYGQLGLGDVIDRNIPS
Sbjct: 174 AETLPRLLDCPSLENVNVKTISCGARHTALVTDNGKVFSWGWNKYGQLGLGDVIDRNIPS 233

Query: 451 QVTIEGCVPRNVACGWWHTLLLAVPPT 477
           +V IEGC+ +NVACGWWHTLLLA  PT
Sbjct: 234 EVAIEGCIAKNVACGWWHTLLLAESPT 260


>gi|357460953|ref|XP_003600758.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355489806|gb|AES71009.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 334

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 226/339 (66%), Positives = 263/339 (77%), Gaps = 35/339 (10%)

Query: 1   MNGEGQEEKMERVVFMWGYLPGALPQRSPILSPLVVRLPLTVGS-AWRDVCGGGCGFAMA 59
           MNG G E K E++V+MWGYLPGALPQR+P+L+P++VR+P T G   W+DV GGGCGFAMA
Sbjct: 1   MNGGGCEVK-EKMVYMWGYLPGALPQRTPLLTPVLVRVPATSGGYNWKDVSGGGCGFAMA 59

Query: 60  ISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEV 119
           IS+S KLITWGSTDDLGQSYVTSGKHGE PEPF LP E SIVKAA+ WAHCVA T+ GEV
Sbjct: 60  ISESGKLITWGSTDDLGQSYVTSGKHGETPEPFSLPNEVSIVKAASAWAHCVAATDCGEV 119

Query: 120 YTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQ--------------------V 159
           YTWGWKEC+PSG+VFG+ S G   +KD   + SSFLTEQ                    V
Sbjct: 120 YTWGWKECIPSGKVFGETSQGVSPEKDAQGKPSSFLTEQGMSNLFSMDICLQIPSDFATV 179

Query: 160 SPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
           S RSQVS+S+GGT S      SGEE SKRR++S AKQ A++SSSGD+ L+A PCLVTLNP
Sbjct: 180 SSRSQVSKSTGGTVS------SGEESSKRRKVSSAKQAAQTSSSGDDILTAMPCLVTLNP 233

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           GV+I +VAAGGRHTL LSDIGQVWGWGYGGEGQLGLGSR+RMVSSPH IPCI+SS     
Sbjct: 234 GVKITSVAAGGRHTLVLSDIGQVWGWGYGGEGQLGLGSRVRMVSSPHIIPCIDSS----- 288

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDA 318
             +L +GS++SEG  FR+PG+ +K IACGGRHSAVIT A
Sbjct: 289 --SLVQGSMSSEGHNFRIPGSCIKAIACGGRHSAVITGA 325



 Score = 41.6 bits (96), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 66/169 (39%), Gaps = 39/169 (23%)

Query: 311 HSAVITDAGALLTFGWG-------LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWH 363
           H    TD G + T+GW        ++G+  QG + ++ +    SS L  Q  G++     
Sbjct: 109 HCVAATDCGEVYTWGWKECIPSGKVFGETSQGVSPEKDAQGKPSSFLTEQ--GMSNLFSM 166

Query: 364 TICISSDGDVYAFG---------------------------GNQFGQLGTGGDQAET-LP 395
            IC+    D                                  Q  Q  + GD   T +P
Sbjct: 167 DICLQIPSDFATVSSRSQVSKSTGGTVSSGEESSKRRKVSSAKQAAQTSSSGDDILTAMP 226

Query: 396 RLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVI 444
            L+       V   SV+ G RHT V++D G+V+ WG+   GQLGLG  +
Sbjct: 227 CLVTLN--PGVKITSVAAGGRHTLVLSDIGQVWGWGYGGEGQLGLGSRV 273


>gi|224098477|ref|XP_002311187.1| predicted protein [Populus trichocarpa]
 gi|222851007|gb|EEE88554.1| predicted protein [Populus trichocarpa]
          Length = 253

 Score =  345 bits (884), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 182/246 (73%), Positives = 199/246 (80%), Gaps = 12/246 (4%)

Query: 1   MNGEGQEEKM-------ERVVFMWGYLPGALPQRSPILSPLVVRLPLTVGSAWRDVCGGG 53
           MNGE +EE +       E++V+MWGYLPGALPQRSPILSPL VR  +    AW+DVCGGG
Sbjct: 1   MNGERKEEGVVNMDVHNEKLVYMWGYLPGALPQRSPILSPLAVRSTVY---AWKDVCGGG 57

Query: 54  CGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAV 113
           CGFAMAIS+S KLITWGSTDDLGQSYVTSGKHGE PE FPLPTEASIVKAAAGWAHCVA 
Sbjct: 58  CGFAMAISESGKLITWGSTDDLGQSYVTSGKHGETPEAFPLPTEASIVKAAAGWAHCVAA 117

Query: 114 TEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSR--SSGG 171
           T  GEVYTWGWKEC+PSG+VF D S   G++KDVFERQ+ F TEQ SPRSQ  R     G
Sbjct: 118 TGNGEVYTWGWKECIPSGKVFSDPSGAGGMEKDVFERQNLFFTEQGSPRSQGPRSSGGSG 177

Query: 172 TSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGR 231
           T SG DGRGS +E +KRRRIS AKQ AESSS+GDE  SAFPCLVTLNPGVRI TV+AGGR
Sbjct: 178 TLSGLDGRGSKDESTKRRRISSAKQAAESSSTGDETPSAFPCLVTLNPGVRIVTVSAGGR 237

Query: 232 HTLALS 237
           HTL LS
Sbjct: 238 HTLTLS 243


>gi|224112701|ref|XP_002316265.1| predicted protein [Populus trichocarpa]
 gi|222865305|gb|EEF02436.1| predicted protein [Populus trichocarpa]
          Length = 202

 Score =  289 bits (739), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 153/205 (74%), Positives = 166/205 (80%), Gaps = 5/205 (2%)

Query: 16  MWGYLPGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDL 75
           MWGYLPGALPQRSPI SPL VR  +    AW+DVCGGGCGFAMAIS+S KLITWGSTDDL
Sbjct: 1   MWGYLPGALPQRSPISSPLAVRSTVY---AWKDVCGGGCGFAMAISESGKLITWGSTDDL 57

Query: 76  GQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFG 135
           GQSYVTSGKHGE PE FPLPTEASIV+AAAGWAHCVA T+ GEVYTWGWKEC+PSG+VFG
Sbjct: 58  GQSYVTSGKHGETPEAFPLPTEASIVEAAAGWAHCVAATDTGEVYTWGWKECIPSGKVFG 117

Query: 136 DLSTGTGLDKDVFERQSSFLTEQV--SPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISL 193
           D S   G  KD FERQ+ F TEQV    +   S S  GT SG DGRGSG+E +KRRRI+ 
Sbjct: 118 DPSGAGGSAKDAFERQNLFFTEQVSPRSQGSRSSSGSGTFSGVDGRGSGDESTKRRRIAS 177

Query: 194 AKQTAESSSSGDENLSAFPCLVTLN 218
           AKQ AESSS+GDE LSA PCLVTLN
Sbjct: 178 AKQAAESSSAGDETLSALPCLVTLN 202


>gi|297597956|ref|NP_001044792.2| Os01g0846800 [Oryza sativa Japonica Group]
 gi|56784032|dbj|BAD82660.1| UVB-resistance protein UVR8-like [Oryza sativa Japonica Group]
 gi|56784705|dbj|BAD81831.1| UVB-resistance protein UVR8-like [Oryza sativa Japonica Group]
 gi|255673871|dbj|BAF06706.2| Os01g0846800 [Oryza sativa Japonica Group]
          Length = 180

 Score =  286 bits (732), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 129/179 (72%), Positives = 157/179 (87%)

Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
           GN VK IACGGRHSAV+TD+GALLTFGWGLYGQCGQG+TDD LSP CVSS+LG++++ + 
Sbjct: 2   GNCVKAIACGGRHSAVVTDSGALLTFGWGLYGQCGQGNTDDVLSPTCVSSILGVKMQDIG 61

Query: 359 AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
           AGLWHT+C S DGDVY+FGGNQFGQLGTG DQAET+P+L+DA SLEN ++++VSCGARH+
Sbjct: 62  AGLWHTVCTSVDGDVYSFGGNQFGQLGTGSDQAETVPKLVDASSLENKNARAVSCGARHS 121

Query: 419 AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAVPPT 477
           A+I D+G+VFCWGWNKYGQLGLGD +DRN+P  V ++   P NV+CGWWHTL+LA  PT
Sbjct: 122 AIITDEGEVFCWGWNKYGQLGLGDSMDRNVPCSVPVDAYHPLNVSCGWWHTLVLAESPT 180



 Score = 38.9 bits (89), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 70/177 (39%), Gaps = 29/177 (16%)

Query: 99  SIVKA-AAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTE 157
           + VKA A G  H   VT+ G + T+GW        ++G    G   D       SS L  
Sbjct: 3   NCVKAIACGGRHSAVVTDSGALLTFGWG-------LYGQCGQGNTDDVLSPTCVSSILGV 55

Query: 158 QVSPR-----SQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFP 212
           ++          V  S  G      G   G+ G+   +     +  ++SS  ++N  A  
Sbjct: 56  KMQDIGAGLWHTVCTSVDGDVYSFGGNQFGQLGTGSDQAETVPKLVDASSLENKNARAVS 115

Query: 213 CLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI-RMVSSPHPI 268
           C               G RH+  ++D G+V+ WG+   GQLGLG  + R V    P+
Sbjct: 116 C---------------GARHSAIITDEGEVFCWGWNKYGQLGLGDSMDRNVPCSVPV 157


>gi|224112699|ref|XP_002316264.1| predicted protein [Populus trichocarpa]
 gi|222865304|gb|EEF02435.1| predicted protein [Populus trichocarpa]
          Length = 164

 Score =  285 bits (730), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 137/157 (87%), Positives = 149/157 (94%)

Query: 236 LSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF 295
           +SDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI+S+YGKDR+  LSRG + SEG  F
Sbjct: 8   VSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIDSAYGKDRAVVLSRGGMTSEGQSF 67

Query: 296 RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
           RVPG++VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSP CVSSLLGI+IE
Sbjct: 68  RVPGSHVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIRIE 127

Query: 356 GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAE 392
            VAAGLWHT+C+S+DGDVY+FGGNQFGQLGTGGDQAE
Sbjct: 128 AVAAGLWHTVCVSADGDVYSFGGNQFGQLGTGGDQAE 164



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 39/68 (57%), Gaps = 1/68 (1%)

Query: 407 HSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
           H K ++CG RH+AVI D G +  +GW  YGQ G G   D   P+ V ++ G     VA G
Sbjct: 73  HVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIRIEAVAAG 132

Query: 466 WWHTLLLA 473
            WHT+ ++
Sbjct: 133 LWHTVCVS 140


>gi|224098479|ref|XP_002311188.1| predicted protein [Populus trichocarpa]
 gi|222851008|gb|EEE88555.1| predicted protein [Populus trichocarpa]
          Length = 148

 Score =  277 bits (709), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 125/147 (85%), Positives = 142/147 (96%)

Query: 331 QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
           +CGQGSTDDELSP CVSSLLGI+IEGVAAGLWHT+C+S+DGDVY FGGNQFGQLGTGGDQ
Sbjct: 2   KCGQGSTDDELSPTCVSSLLGIRIEGVAAGLWHTVCVSADGDVYTFGGNQFGQLGTGGDQ 61

Query: 391 AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
           AETLPRLL+APSLEN+H+K++SCGARH+ +I++DGKVFCWGWNKYGQLGLGDVIDRN+PS
Sbjct: 62  AETLPRLLEAPSLENIHAKTISCGARHSTIISEDGKVFCWGWNKYGQLGLGDVIDRNVPS 121

Query: 451 QVTIEGCVPRNVACGWWHTLLLAVPPT 477
           QVTI+GCVP+NVACGWWHTLLLA  PT
Sbjct: 122 QVTIDGCVPKNVACGWWHTLLLAESPT 148



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 78/166 (46%), Gaps = 28/166 (16%)

Query: 203 SGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMV 262
           S D+ LS  P  V+   G+RI  VAAG  HT+ +S  G V+ +G    GQLG G      
Sbjct: 7   STDDELS--PTCVSSLLGIRIEGVAAGLWHTVCVSADGDVYTFGGNQFGQLGTGG----- 59

Query: 263 SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL 322
                          D++  L R     E P       + K I+CG RHS +I++ G + 
Sbjct: 60  ---------------DQAETLPR---LLEAPSLE--NIHAKTISCGARHSTIISEDGKVF 99

Query: 323 TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICIS 368
            +GW  YGQ G G   D   P+ V ++ G   + VA G WHT+ ++
Sbjct: 100 CWGWNKYGQLGLGDVIDRNVPSQV-TIDGCVPKNVACGWWHTLLLA 144


>gi|326499730|dbj|BAJ86176.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 165

 Score =  257 bits (657), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 115/164 (70%), Positives = 144/164 (87%)

Query: 314 VITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDV 373
           +  D+GALL FGWGLYGQCGQG+TDD LSP CVS++LG++++ VAAGLWHT+ IS+DGDV
Sbjct: 2   LFADSGALLAFGWGLYGQCGQGNTDDVLSPTCVSAILGVKMQDVAAGLWHTVSISADGDV 61

Query: 374 YAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWN 433
           Y+FGGNQFGQLG G DQAET+P+L+DAPSL+N +++SVSCGARH+A+I D+G+VFCWGWN
Sbjct: 62  YSFGGNQFGQLGIGSDQAETIPKLVDAPSLKNKNARSVSCGARHSAIITDEGEVFCWGWN 121

Query: 434 KYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAVPPT 477
           KYGQLGLGD +DRN+P  V ++G  P NV+CGWWHTL+LA  PT
Sbjct: 122 KYGQLGLGDSMDRNVPCIVPVDGYHPLNVSCGWWHTLVLAESPT 165



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 82/165 (49%), Gaps = 30/165 (18%)

Query: 205 DENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSS 264
           D+ LS  P  V+   GV++  VAAG  HT+++S  G V+ +G    GQLG+GS       
Sbjct: 26  DDVLS--PTCVSAILGVKMQDVAAGLWHTVSISADGDVYSFGGNQFGQLGIGS-----DQ 78

Query: 265 PHPIP-CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLT 323
              IP  +++   K+++A                     + ++CG RHSA+ITD G +  
Sbjct: 79  AETIPKLVDAPSLKNKNA---------------------RSVSCGARHSAIITDEGEVFC 117

Query: 324 FGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICIS 368
           +GW  YGQ G G + D   P C+  + G     V+ G WHT+ ++
Sbjct: 118 WGWNKYGQLGLGDSMDRNVP-CIVPVDGYHPLNVSCGWWHTLVLA 161


>gi|226505376|ref|NP_001142009.1| uncharacterized protein LOC100274159 [Zea mays]
 gi|194706770|gb|ACF87469.1| unknown [Zea mays]
          Length = 124

 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 86/124 (69%), Positives = 106/124 (85%)

Query: 354 IEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSC 413
           ++ VAAGLWHT+C S DGDVY+FGGNQFGQLGTG DQAET+P+L+DA SLEN +++SVSC
Sbjct: 1   MQDVAAGLWHTVCTSVDGDVYSFGGNQFGQLGTGSDQAETVPKLVDATSLENKNARSVSC 60

Query: 414 GARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GARH+A+I D+G+VFCWGWNKYGQLGLGD +DRN+P  V ++   P NV+CGW HTL+LA
Sbjct: 61  GARHSAIITDEGEVFCWGWNKYGQLGLGDSMDRNVPCSVPVDAYHPLNVSCGWRHTLVLA 120

Query: 474 VPPT 477
             PT
Sbjct: 121 DSPT 124



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 65/124 (52%), Gaps = 5/124 (4%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCV--SSLLGIQIEGVAA 359
           ++ +A G  H+   +  G + +FG   +GQ G GS   E  P  V  +SL       V+ 
Sbjct: 1   MQDVAAGLWHTVCTSVDGDVYSFGGNQFGQLGTGSDQAETVPKLVDATSLENKNARSVSC 60

Query: 360 GLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
           G  H+  I+ +G+V+ +G N++GQLG G      +P    +  ++  H  +VSCG RHT 
Sbjct: 61  GARHSAIITDEGEVFCWGWNKYGQLGLGDSMDRNVPC---SVPVDAYHPLNVSCGWRHTL 117

Query: 420 VIAD 423
           V+AD
Sbjct: 118 VLAD 121



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 62/146 (42%), Gaps = 26/146 (17%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  VAAG  HT+  S  G V+ +G    GQLG GS          +P +  +   +   A
Sbjct: 1   MQDVAAGLWHTVCTSVDGDVYSFGGNQFGQLGTGS-----DQAETVPKLVDATSLENKNA 55

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                               + ++CG RHSA+ITD G +  +GW  YGQ G G + D   
Sbjct: 56  --------------------RSVSCGARHSAIITDEGEVFCWGWNKYGQLGLGDSMDRNV 95

Query: 343 PNCVSSLLGIQIEGVAAGLWHTICIS 368
           P C   +       V+ G  HT+ ++
Sbjct: 96  P-CSVPVDAYHPLNVSCGWRHTLVLA 120


>gi|379318631|pdb|4DNV|A Chain A, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
 gi|379318632|pdb|4DNV|B Chain B, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
 gi|379318633|pdb|4DNV|C Chain C, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
 gi|379318634|pdb|4DNV|D Chain D, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
          Length = 370

 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 126/411 (30%), Positives = 187/411 (45%), Gaps = 62/411 (15%)

Query: 49  VCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEAS------IVK 102
           +   G   ++A+     + +WG  +D GQ       HG+  E  P PT+ S      IV 
Sbjct: 8   IISAGASHSVALLSGDIVCSWGRGED-GQL-----GHGD-AEDRPSPTQLSALDGHQIVS 60

Query: 103 AAAGWAHCVAVTEGG-EVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSP 161
              G  H VA ++ G EVY+WGW +       FG L  G G   D+F          +  
Sbjct: 61  VTCGADHTVAYSQSGMEVYSWGWGD-------FGRL--GHGNSSDLFTPLPIKALHGIRI 111

Query: 162 RSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGV 221
           +      S   +   +G       ++  ++ L          GD   S  P  +    G+
Sbjct: 112 KQIACGDSHCLAVTMEGEVQSWGRNQNGQLGL----------GDTEDSLVPQKIQAFEGI 161

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
           RI  VAAG  HT A+++ G ++GWG+G  G LGLG                     DR+ 
Sbjct: 162 RIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLG---------------------DRTD 200

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL 341
            L    V S G      G  +  +ACG RH+  ++ +GAL T+GW  YGQ G G  +D L
Sbjct: 201 RLVPERVTSTG------GEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHL 254

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
            P+ + +L    I  ++ G  HT+ ++SDG +Y +G N+FGQ+G G +  +  P  +  P
Sbjct: 255 IPHKLEALSNSFISQISGGFRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP 314

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
             + V    VSCG RHT  + +   VF WG    GQLG+G+ +DRN P  +
Sbjct: 315 DDQKV--VQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKII 363



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 92/260 (35%), Positives = 129/260 (49%), Gaps = 30/260 (11%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P  +    G+RI  +A G  H LA++  G+V  WG    GQLGLG     +  P  I   
Sbjct: 100 PLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLV-PQKIQAF 158

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
           E                          G  +K +A G  H+A +T+ G L  +GWG YG 
Sbjct: 159 E--------------------------GIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGN 192

Query: 332 CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
            G G   D L P  V+S  G ++  VA G  HTI +S  G +Y +G +++GQLG G  + 
Sbjct: 193 LGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLED 252

Query: 392 ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
             +P  L+A  L N     +S G RHT  +  DGK++ WGWNK+GQ+G+G+ +D+  P Q
Sbjct: 253 HLIPHKLEA--LSNSFISQISGGFRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQ 310

Query: 452 VTI-EGCVPRNVACGWWHTL 470
           V   +      V+CGW HTL
Sbjct: 311 VRFPDDQKVVQVSCGWRHTL 330



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 134/254 (52%), Gaps = 31/254 (12%)

Query: 219 PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
           P  ++  ++AG  H++AL     V  WG G +GQLG G      +   P P   S+    
Sbjct: 2   PPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGD-----AEDRPSPTQLSA---- 52

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA-LLTFGWGLYGQCGQGST 337
                             + G+ +  + CG  H+   + +G  + ++GWG +G+ G G++
Sbjct: 53  ------------------LDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNS 94

Query: 338 DDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
            D  +P  + +L GI+I+ +A G  H + ++ +G+V ++G NQ GQLG G  +   +P+ 
Sbjct: 95  SDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQK 154

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC 457
           + A   E +  K V+ GA HTA + +DG ++ WGW +YG LGLGD  DR +P +VT  G 
Sbjct: 155 IQA--FEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGG 212

Query: 458 VPRN-VACGWWHTL 470
              + VACGW HT+
Sbjct: 213 EKMSMVACGWRHTI 226



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 86/325 (26%), Positives = 141/325 (43%), Gaps = 51/325 (15%)

Query: 85  HGEIPEPF-PLPTEA----SIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLST 139
           HG   + F PLP +A     I + A G +HC+AVT  GEV +WG  +        G L  
Sbjct: 91  HGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQN-------GQLGL 143

Query: 140 GTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAE 199
           G   D  V ++  +F  E +  +   + +    +   DG   G    +   + L      
Sbjct: 144 GDTEDSLVPQKIQAF--EGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGL------ 195

Query: 200 SSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
               GD      P  VT   G +++ VA G RHT+++S  G ++ +G+   GQLG G  +
Sbjct: 196 ----GDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGD-L 250

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAG 319
                PH +  + +S                          ++  I+ G RH+  +T  G
Sbjct: 251 EDHLIPHKLEALSNS--------------------------FISQISGGFRHTMALTSDG 284

Query: 320 ALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN 379
            L  +GW  +GQ G G+  D+ SP  V      ++  V+ G  HT+ ++   +V+A+G  
Sbjct: 285 KLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRG 344

Query: 380 QFGQLGTGGDQAETLPRLLDAPSLE 404
             GQLG G       P++++A S++
Sbjct: 345 TNGQLGIGESVDRNFPKIIEALSVD 369


>gi|218190962|gb|EEC73389.1| hypothetical protein OsI_07634 [Oryza sativa Indica Group]
          Length = 448

 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 133/389 (34%), Positives = 180/389 (46%), Gaps = 54/389 (13%)

Query: 90  EPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFE 149
           E  P   E S+V  +AG +H VA+  GG V +WG  E        G L  G   D+ V  
Sbjct: 12  EAVPEAPERSVVLISAGASHSVALLSGGVVCSWGRGE-------DGQLGHGDAEDRPV-- 62

Query: 150 RQSSFLTEQVSPRSQVSRSSGGTSS----GTDGRGSGEEGSKRRRISLAKQTAESSSSGD 205
              + LT      +    + GG +S    G D   +     + +  S           G+
Sbjct: 63  --PTVLT------AAFDDAPGGVASVVICGAD-HTTAYSDEELQLYSWGWGDFGRLGHGN 113

Query: 206 ENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSP 265
            +    P  +    GVRI  +A G  H LA++  G V  WG    GQLGLG+    +  P
Sbjct: 114 SSDVFNPQPIQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLL-P 172

Query: 266 HPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFG 325
             I   E                          G  VK IA G  H+A +T+ G L  +G
Sbjct: 173 QKIQAFE--------------------------GVRVKMIAAGAEHTAAVTEDGDLYGWG 206

Query: 326 WGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLG 385
           WG YG  G G  DD L P  VSS+ G ++  VA G  HTI +SS G +Y +G +++GQLG
Sbjct: 207 WGRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLG 266

Query: 386 TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVID 445
            G  +   +P  L+A  L++     +S G RHT  +A DGK++ WGWNK+GQ+G+GD  D
Sbjct: 267 HGDFEDHLVPHKLEA--LKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVGDNED 324

Query: 446 RNIPSQVTI--EGCVPRNVACGWWHTLLL 472
              P QV    E  V + VACGW HTL L
Sbjct: 325 HCSPVQVNFPNEQKVVQ-VACGWRHTLAL 352



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 84/249 (33%), Positives = 130/249 (52%), Gaps = 29/249 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
           G+   S  P  +    GVR+  +AAG  HT A+++ G ++GWG+G  G LGLG R     
Sbjct: 164 GNTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDR----- 218

Query: 264 SPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLT 323
                         DR       SVN         G  +  +ACG RH+  ++ +G++ T
Sbjct: 219 -------------DDRLIPEKVSSVN---------GQKMVLVACGWRHTITVSSSGSIYT 256

Query: 324 FGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQ 383
           +GW  YGQ G G  +D L P+ + +L    I  ++ G  HT+ +++DG +Y +G N+FGQ
Sbjct: 257 YGWSKYGQLGHGDFEDHLVPHKLEALKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQ 316

Query: 384 LGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDV 443
           +G G ++    P  ++ P+ + V    V+CG RHT  + +   VF WG    GQLG G++
Sbjct: 317 VGVGDNEDHCSPVQVNFPNEQKV--VQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGEI 374

Query: 444 IDRNIPSQV 452
           +DRNIP  +
Sbjct: 375 VDRNIPKMI 383



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/257 (33%), Positives = 134/257 (52%), Gaps = 27/257 (10%)

Query: 219 PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
           P   +  ++AG  H++AL   G V  WG G +GQLG G      +   P+P + ++   D
Sbjct: 18  PERSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGD-----AEDRPVPTVLTAAFDD 72

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAG-ALLTFGWGLYGQCGQGST 337
                              PG     + CG  H+   +D    L ++GWG +G+ G G++
Sbjct: 73  ------------------APGGVASVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNS 114

Query: 338 DDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
            D  +P  + +L G++I  +A G  H + ++  G V+++G NQ GQLG G  +   LP+ 
Sbjct: 115 SDVFNPQPIQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQK 174

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEG 456
           + A   E V  K ++ GA HTA + +DG ++ WGW +YG LGLGD  DR IP +V ++ G
Sbjct: 175 IQA--FEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNG 232

Query: 457 CVPRNVACGWWHTLLLA 473
                VACGW HT+ ++
Sbjct: 233 QKMVLVACGWRHTITVS 249


>gi|115446671|ref|NP_001047115.1| Os02g0554100 [Oryza sativa Japonica Group]
 gi|50725773|dbj|BAD33304.1| putative UVB-resistance protein (UVR8) [Oryza sativa Japonica
           Group]
 gi|113536646|dbj|BAF09029.1| Os02g0554100 [Oryza sativa Japonica Group]
 gi|215697683|dbj|BAG91677.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 453

 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 133/389 (34%), Positives = 180/389 (46%), Gaps = 54/389 (13%)

Query: 90  EPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFE 149
           E  P   E S+V  +AG +H VA+  GG V +WG  E        G L  G   D+ V  
Sbjct: 17  EAVPEAPERSVVLISAGASHSVALLSGGVVCSWGRGE-------DGQLGHGDAEDRPV-- 67

Query: 150 RQSSFLTEQVSPRSQVSRSSGGTSS----GTDGRGSGEEGSKRRRISLAKQTAESSSSGD 205
              + LT      +    + GG +S    G D   +     + +  S           G+
Sbjct: 68  --PTVLT------AAFDDAPGGVASVVICGAD-HTTAYSDEELQLYSWGWGDFGRLGHGN 118

Query: 206 ENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSP 265
            +    P  +    GVRI  +A G  H LA++  G V  WG    GQLGLG+    +  P
Sbjct: 119 SSDVFNPQPIQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLL-P 177

Query: 266 HPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFG 325
             I   E                          G  VK IA G  H+A +T+ G L  +G
Sbjct: 178 QKIQAFE--------------------------GVRVKMIAAGAEHTAAVTEDGDLYGWG 211

Query: 326 WGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLG 385
           WG YG  G G  DD L P  VSS+ G ++  VA G  HTI +SS G +Y +G +++GQLG
Sbjct: 212 WGRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLG 271

Query: 386 TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVID 445
            G  +   +P  L+A  L++     +S G RHT  +A DGK++ WGWNK+GQ+G+GD  D
Sbjct: 272 HGDFEDHLVPHKLEA--LKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVGDNED 329

Query: 446 RNIPSQVTI--EGCVPRNVACGWWHTLLL 472
              P QV    E  V + VACGW HTL L
Sbjct: 330 HCSPVQVNFPNEQKVVQ-VACGWRHTLAL 357



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 84/249 (33%), Positives = 130/249 (52%), Gaps = 29/249 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
           G+   S  P  +    GVR+  +AAG  HT A+++ G ++GWG+G  G LGLG R     
Sbjct: 169 GNTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDR----- 223

Query: 264 SPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLT 323
                         DR       SVN         G  +  +ACG RH+  ++ +G++ T
Sbjct: 224 -------------DDRLIPEKVSSVN---------GQKMVLVACGWRHTITVSSSGSIYT 261

Query: 324 FGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQ 383
           +GW  YGQ G G  +D L P+ + +L    I  ++ G  HT+ +++DG +Y +G N+FGQ
Sbjct: 262 YGWSKYGQLGHGDFEDHLVPHKLEALKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQ 321

Query: 384 LGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDV 443
           +G G ++    P  ++ P+ + V    V+CG RHT  + +   VF WG    GQLG G++
Sbjct: 322 VGVGDNEDHCSPVQVNFPNEQKV--VQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGEI 379

Query: 444 IDRNIPSQV 452
           +DRNIP  +
Sbjct: 380 VDRNIPKMI 388



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/257 (33%), Positives = 134/257 (52%), Gaps = 27/257 (10%)

Query: 219 PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
           P   +  ++AG  H++AL   G V  WG G +GQLG G      +   P+P + ++   D
Sbjct: 23  PERSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGD-----AEDRPVPTVLTAAFDD 77

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAG-ALLTFGWGLYGQCGQGST 337
                              PG     + CG  H+   +D    L ++GWG +G+ G G++
Sbjct: 78  ------------------APGGVASVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNS 119

Query: 338 DDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
            D  +P  + +L G++I  +A G  H + ++  G V+++G NQ GQLG G  +   LP+ 
Sbjct: 120 SDVFNPQPIQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQK 179

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEG 456
           + A   E V  K ++ GA HTA + +DG ++ WGW +YG LGLGD  DR IP +V ++ G
Sbjct: 180 IQA--FEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNG 237

Query: 457 CVPRNVACGWWHTLLLA 473
                VACGW HT+ ++
Sbjct: 238 QKMVLVACGWRHTITVS 254


>gi|383280368|pdb|4D9S|A Chain A, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
           Resistance Locus 8)
 gi|383280369|pdb|4D9S|B Chain B, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
           Resistance Locus 8)
          Length = 406

 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 126/411 (30%), Positives = 187/411 (45%), Gaps = 62/411 (15%)

Query: 49  VCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEAS------IVK 102
           +   G   ++A+     + +WG  +D GQ       HG+  E  P PT+ S      IV 
Sbjct: 20  IISAGASHSVALLSGDIVCSWGRGED-GQL-----GHGD-AEDRPSPTQLSALDGHQIVS 72

Query: 103 AAAGWAHCVAVTEGG-EVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSP 161
              G  H VA ++ G EVY+WGW +       FG L  G G   D+F          +  
Sbjct: 73  VTCGADHTVAYSQSGMEVYSWGWGD-------FGRL--GHGNSSDLFTPLPIKALHGIRI 123

Query: 162 RSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGV 221
           +      S   +   +G       ++  ++ L          GD   S  P  +    G+
Sbjct: 124 KQIACGDSHCLAVTMEGEVQSWGRNQNGQLGL----------GDTEDSLVPQKIQAFEGI 173

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
           RI  VAAG  HT A+++ G ++GWG+G  G LGLG                     DR+ 
Sbjct: 174 RIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLG---------------------DRTD 212

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL 341
            L    V S G      G  +  +ACG RH+  ++ +GAL T+GW  YGQ G G  +D L
Sbjct: 213 RLVPERVTSTG------GEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHL 266

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
            P+ + +L    I  ++ G  HT+ ++SDG +Y +G N+FGQ+G G +  +  P  +  P
Sbjct: 267 IPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP 326

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
             + V    VSCG RHT  + +   VF WG    GQLG+G+ +DRN P  +
Sbjct: 327 DDQKV--VQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKII 375



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 92/262 (35%), Positives = 130/262 (49%), Gaps = 30/262 (11%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P  +    G+RI  +A G  H LA++  G+V  WG    GQLGLG     +  P  I   
Sbjct: 112 PLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLV-PQKIQAF 170

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
           E                          G  +K +A G  H+A +T+ G L  +GWG YG 
Sbjct: 171 E--------------------------GIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGN 204

Query: 332 CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
            G G   D L P  V+S  G ++  VA G  HTI +S  G +Y +G +++GQLG G  + 
Sbjct: 205 LGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLED 264

Query: 392 ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
             +P  L+A  L N     +S G RHT  +  DGK++ WGWNK+GQ+G+G+ +D+  P Q
Sbjct: 265 HLIPHKLEA--LSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQ 322

Query: 452 VTI-EGCVPRNVACGWWHTLLL 472
           V   +      V+CGW HTL +
Sbjct: 323 VRFPDDQKVVQVSCGWRHTLAV 344



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 134/254 (52%), Gaps = 31/254 (12%)

Query: 219 PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
           P  ++  ++AG  H++AL     V  WG G +GQLG G      +   P P   S+    
Sbjct: 14  PPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGD-----AEDRPSPTQLSA---- 64

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA-LLTFGWGLYGQCGQGST 337
                             + G+ +  + CG  H+   + +G  + ++GWG +G+ G G++
Sbjct: 65  ------------------LDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNS 106

Query: 338 DDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
            D  +P  + +L GI+I+ +A G  H + ++ +G+V ++G NQ GQLG G  +   +P+ 
Sbjct: 107 SDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQK 166

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC 457
           + A   E +  K V+ GA HTA + +DG ++ WGW +YG LGLGD  DR +P +VT  G 
Sbjct: 167 IQA--FEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGG 224

Query: 458 VPRN-VACGWWHTL 470
              + VACGW HT+
Sbjct: 225 EKMSMVACGWRHTI 238



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 86/332 (25%), Positives = 143/332 (43%), Gaps = 51/332 (15%)

Query: 85  HGEIPEPF-PLPTEA----SIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLST 139
           HG   + F PLP +A     I + A G +HC+AVT  GEV +WG  +        G L  
Sbjct: 103 HGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQN-------GQLGL 155

Query: 140 GTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAE 199
           G   D  V ++  +F  E +  +   + +    +   DG   G    +   + L      
Sbjct: 156 GDTEDSLVPQKIQAF--EGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGL------ 207

Query: 200 SSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
               GD      P  VT   G +++ VA G RHT+++S  G ++ +G+   GQLG G  +
Sbjct: 208 ----GDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGD-L 262

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAG 319
                PH +  + +S                          ++  I+ G RH+  +T  G
Sbjct: 263 EDHLIPHKLEALSNS--------------------------FISQISGGWRHTMALTSDG 296

Query: 320 ALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN 379
            L  +GW  +GQ G G+  D+ SP  V      ++  V+ G  HT+ ++   +V+A+G  
Sbjct: 297 KLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRG 356

Query: 380 QFGQLGTGGDQAETLPRLLDAPSLENVHSKSV 411
             GQLG G       P++++A S++    + +
Sbjct: 357 TNGQLGIGESVDRNFPKIIEALSVDGASGQHI 388


>gi|168008673|ref|XP_001757031.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162691902|gb|EDQ78262.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 420

 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 122/403 (30%), Positives = 184/403 (45%), Gaps = 50/403 (12%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
           G    +A+     + +WG  +D GQ      +   +P       +  I     G  H  A
Sbjct: 22  GASHTVALLSGDLVCSWGRGED-GQLGHGDAEERHLPLVISALDDCEISSITCGADHTTA 80

Query: 113 VTEGGE-VYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG 171
            +E    VY+WGW +       FG L  G G   D+F  ++    + +    ++ + + G
Sbjct: 81  RSESTRTVYSWGWGD-------FGRL--GHGNSSDLFIPRAIKGLKGL----EIKQIACG 127

Query: 172 TSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGR 231
            S      G GE  S  R      Q  +      E++   P  V    G+ +  +AAG  
Sbjct: 128 DSHCLAITGDGEVHSWGR-----NQNGQLGLGHTEDV-LVPNKVAAFEGIAVKMLAAGAE 181

Query: 232 HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
           HT A+++ G+++GWG+G  G LGLG                     DR+  L  G V + 
Sbjct: 182 HTAAVTESGKLYGWGWGRYGNLGLG---------------------DRNDRLVPGEVAA- 219

Query: 292 GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                VPG  +  +ACG RH+  + ++G L TFGW  YGQ G G  +D L P+ V +L  
Sbjct: 220 -----VPGEKMNLVACGWRHTIAVANSGNLYTFGWSKYGQLGHGDFEDHLVPHQVQALKN 274

Query: 352 IQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSV 411
             I+ V+ G  HT+ +  DG++Y +G N+FGQ+G G       P+L+     E V    V
Sbjct: 275 KTIQAVSGGWRHTVALDEDGELYGWGWNKFGQVGCGNTDDHNSPKLITGIVNEKV--TRV 332

Query: 412 SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI 454
           +CG RHT  I D G V+ WG    GQLG GD +DR +P ++ +
Sbjct: 333 TCGWRHTVAITDRGNVYSWGRGTSGQLGHGDAVDRCVPKRIEL 375



 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 90/256 (35%), Positives = 135/256 (52%), Gaps = 32/256 (12%)

Query: 219 PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
            G+ I  +A G  H LA++  G+V  WG    GQLGLG     V  P+ +   E      
Sbjct: 117 KGLEIKQIACGDSHCLAITGDGEVHSWGRNQNGQLGLG-HTEDVLVPNKVAAFE------ 169

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
                               G  VK +A G  H+A +T++G L  +GWG YG  G G  +
Sbjct: 170 --------------------GIAVKMLAAGAEHTAAVTESGKLYGWGWGRYGNLGLGDRN 209

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D L P  V+++ G ++  VA G  HTI +++ G++Y FG +++GQLG G  +   +P  +
Sbjct: 210 DRLVPGEVAAVPGEKMNLVACGWRHTIAVANSGNLYTFGWSKYGQLGHGDFEDHLVPHQV 269

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT--IEG 456
            A  L+N   ++VS G RHT  + +DG+++ WGWNK+GQ+G G+  D N P  +T  +  
Sbjct: 270 QA--LKNKTIQAVSGGWRHTVALDEDGELYGWGWNKFGQVGCGNTDDHNSPKLITGIVNE 327

Query: 457 CVPRNVACGWWHTLLL 472
            V R V CGW HT+ +
Sbjct: 328 KVTR-VTCGWRHTVAI 342



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 87/257 (33%), Positives = 135/257 (52%), Gaps = 31/257 (12%)

Query: 219 PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
           P  R+ +V+AG  HT+AL     V  WG G +GQLG G      +    +P + S     
Sbjct: 12  PRRRVISVSAGASHTVALLSGDLVCSWGRGEDGQLGHGD-----AEERHLPLVIS----- 61

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAG-ALLTFGWGLYGQCGQGST 337
              AL    ++S              I CG  H+   +++   + ++GWG +G+ G G++
Sbjct: 62  ---ALDDCEISS--------------ITCGADHTTARSESTRTVYSWGWGDFGRLGHGNS 104

Query: 338 DDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
            D   P  +  L G++I+ +A G  H + I+ DG+V+++G NQ GQLG G  +   +P  
Sbjct: 105 SDLFIPRAIKGLKGLEIKQIACGDSHCLAITGDGEVHSWGRNQNGQLGLGHTEDVLVPNK 164

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEG 456
           + A   E +  K ++ GA HTA + + GK++ WGW +YG LGLGD  DR +P +V  + G
Sbjct: 165 VAA--FEGIAVKMLAAGAEHTAAVTESGKLYGWGWGRYGNLGLGDRNDRLVPGEVAAVPG 222

Query: 457 CVPRNVACGWWHTLLLA 473
                VACGW HT+ +A
Sbjct: 223 EKMNLVACGWRHTIAVA 239


>gi|15237540|ref|NP_201191.1| protein UV-B resistance 8 [Arabidopsis thaliana]
 gi|10177674|dbj|BAB11034.1| UVB-resistance protein UVR8 [Arabidopsis thaliana]
 gi|21928123|gb|AAM78089.1| AT5g63860/MGI19_6 [Arabidopsis thaliana]
 gi|23308399|gb|AAN18169.1| At5g63860/MGI19_6 [Arabidopsis thaliana]
 gi|332010422|gb|AED97805.1| protein UV-B resistance 8 [Arabidopsis thaliana]
          Length = 440

 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 126/411 (30%), Positives = 187/411 (45%), Gaps = 62/411 (15%)

Query: 49  VCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEAS------IVK 102
           +   G   ++A+     + +WG  +D GQ       HG+  E  P PT+ S      IV 
Sbjct: 19  IISAGASHSVALLSGDIVCSWGRGED-GQL-----GHGD-AEDRPSPTQLSALDGHQIVS 71

Query: 103 AAAGWAHCVAVTEGG-EVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSP 161
              G  H VA ++ G EVY+WGW +       FG L  G G   D+F          +  
Sbjct: 72  VTCGADHTVAYSQSGMEVYSWGWGD-------FGRL--GHGNSSDLFTPLPIKALHGIRI 122

Query: 162 RSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGV 221
           +      S   +   +G       ++  ++ L          GD   S  P  +    G+
Sbjct: 123 KQIACGDSHCLAVTMEGEVQSWGRNQNGQLGL----------GDTEDSLVPQKIQAFEGI 172

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
           RI  VAAG  HT A+++ G ++GWG+G  G LGLG                     DR+ 
Sbjct: 173 RIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLG---------------------DRTD 211

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL 341
            L    V S G      G  +  +ACG RH+  ++ +GAL T+GW  YGQ G G  +D L
Sbjct: 212 RLVPERVTSTG------GEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHL 265

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
            P+ + +L    I  ++ G  HT+ ++SDG +Y +G N+FGQ+G G +  +  P  +  P
Sbjct: 266 IPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP 325

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
             + V    VSCG RHT  + +   VF WG    GQLG+G+ +DRN P  +
Sbjct: 326 DDQKV--VQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKII 374



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 92/262 (35%), Positives = 130/262 (49%), Gaps = 30/262 (11%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P  +    G+RI  +A G  H LA++  G+V  WG    GQLGLG     +  P  I   
Sbjct: 111 PLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLV-PQKIQAF 169

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
           E                          G  +K +A G  H+A +T+ G L  +GWG YG 
Sbjct: 170 E--------------------------GIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGN 203

Query: 332 CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
            G G   D L P  V+S  G ++  VA G  HTI +S  G +Y +G +++GQLG G  + 
Sbjct: 204 LGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLED 263

Query: 392 ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
             +P  L+A  L N     +S G RHT  +  DGK++ WGWNK+GQ+G+G+ +D+  P Q
Sbjct: 264 HLIPHKLEA--LSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQ 321

Query: 452 VTI-EGCVPRNVACGWWHTLLL 472
           V   +      V+CGW HTL +
Sbjct: 322 VRFPDDQKVVQVSCGWRHTLAV 343



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 134/254 (52%), Gaps = 31/254 (12%)

Query: 219 PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
           P  ++  ++AG  H++AL     V  WG G +GQLG G      +   P P   S+    
Sbjct: 13  PPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGD-----AEDRPSPTQLSA---- 63

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA-LLTFGWGLYGQCGQGST 337
                             + G+ +  + CG  H+   + +G  + ++GWG +G+ G G++
Sbjct: 64  ------------------LDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNS 105

Query: 338 DDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
            D  +P  + +L GI+I+ +A G  H + ++ +G+V ++G NQ GQLG G  +   +P+ 
Sbjct: 106 SDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQK 165

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC 457
           + A   E +  K V+ GA HTA + +DG ++ WGW +YG LGLGD  DR +P +VT  G 
Sbjct: 166 IQA--FEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGG 223

Query: 458 VPRN-VACGWWHTL 470
              + VACGW HT+
Sbjct: 224 EKMSMVACGWRHTI 237



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 87/334 (26%), Positives = 145/334 (43%), Gaps = 55/334 (16%)

Query: 85  HGEIPEPF-PLPTEA----SIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLST 139
           HG   + F PLP +A     I + A G +HC+AVT  GEV +WG  +        G L  
Sbjct: 102 HGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQN-------GQLGL 154

Query: 140 GTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTD--GRGSGEEGSKRRRISLAKQT 197
           G   D  V ++  +F   ++   +  +  +   +   D  G G G  G+    + L    
Sbjct: 155 GDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGN----LGL---- 206

Query: 198 AESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS 257
                 GD      P  VT   G +++ VA G RHT+++S  G ++ +G+   GQLG G 
Sbjct: 207 ------GDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGD 260

Query: 258 RIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITD 317
            +     PH +  + +S                          ++  I+ G RH+  +T 
Sbjct: 261 -LEDHLIPHKLEALSNS--------------------------FISQISGGWRHTMALTS 293

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
            G L  +GW  +GQ G G+  D+ SP  V      ++  V+ G  HT+ ++   +V+A+G
Sbjct: 294 DGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWG 353

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSV 411
               GQLG G       P++++A S++    + +
Sbjct: 354 RGTNGQLGIGESVDRNFPKIIEALSVDGASGQHI 387


>gi|297797389|ref|XP_002866579.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
 gi|297312414|gb|EFH42838.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
          Length = 440

 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 126/411 (30%), Positives = 187/411 (45%), Gaps = 62/411 (15%)

Query: 49  VCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEAS------IVK 102
           +   G   ++A+     + +WG  +D GQ       HG+  E  P PT+ S      IV 
Sbjct: 19  IISAGASHSVALLSGDIVCSWGRGED-GQL-----GHGD-AEDRPSPTQLSALDGHQIVS 71

Query: 103 AAAGWAHCVAVTEGG-EVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSP 161
              G  H VA ++ G EVY+WGW +       FG L  G G   D+F          +  
Sbjct: 72  VTCGADHTVAYSQSGMEVYSWGWGD-------FGRL--GHGNSSDLFTPLPIKALHGIRI 122

Query: 162 RSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGV 221
           +      S   +   +G       ++  ++ L          GD   S  P  +    G+
Sbjct: 123 KQIACGDSHCLAVTMEGEVQSWGRNQNGQLGL----------GDTEDSLVPQKIQAFEGI 172

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
           RI  VAAG  HT A+++ G ++GWG+G  G LGLG                     DR+ 
Sbjct: 173 RIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLG---------------------DRND 211

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL 341
            L    V S G      G  +  +ACG RH+  ++ +GAL T+GW  YGQ G G  +D L
Sbjct: 212 RLVPERVTSAG------GEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHL 265

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
            P+ + +L    I  ++ G  HT+ ++SDG +Y +G N+FGQ+G G +  +  P  +  P
Sbjct: 266 IPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP 325

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
             + V    VSCG RHT  + +   VF WG    GQLG+G+ +DRN P  +
Sbjct: 326 DDQKV--VQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKII 374



 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 93/262 (35%), Positives = 132/262 (50%), Gaps = 30/262 (11%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P  +    G+RI  +A G  H LA++  G+V  WG    GQLGLG     +  P  I   
Sbjct: 111 PLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLV-PQKIQAF 169

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
           E                     G R+     K +A G  H+A +T+ G L  +GWG YG 
Sbjct: 170 E---------------------GIRI-----KMVAAGAEHTAAVTEDGDLYGWGWGRYGN 203

Query: 332 CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
            G G  +D L P  V+S  G ++  VA G  HTI +S  G +Y +G +++GQLG G  + 
Sbjct: 204 LGLGDRNDRLVPERVTSAGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLED 263

Query: 392 ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
             +P  L+A  L N     +S G RHT  +  DGK++ WGWNK+GQ+G+G+ +D+  P Q
Sbjct: 264 HLIPHKLEA--LSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQ 321

Query: 452 VTI-EGCVPRNVACGWWHTLLL 472
           V   +      V+CGW HTL +
Sbjct: 322 VRFPDDQKVVQVSCGWRHTLAV 343



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 133/254 (52%), Gaps = 31/254 (12%)

Query: 219 PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
           P   +  ++AG  H++AL     V  WG G +GQLG G      +   P P   S+    
Sbjct: 13  PPRTVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGD-----AEDRPSPTQLSA---- 63

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA-LLTFGWGLYGQCGQGST 337
                             + G+ +  + CG  H+   + +G  + ++GWG +G+ G G++
Sbjct: 64  ------------------LDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNS 105

Query: 338 DDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
            D  +P  + +L GI+I+ +A G  H + ++ +G+V ++G NQ GQLG G  +   +P+ 
Sbjct: 106 SDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQK 165

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC 457
           + A   E +  K V+ GA HTA + +DG ++ WGW +YG LGLGD  DR +P +VT  G 
Sbjct: 166 IQA--FEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPERVTSAGG 223

Query: 458 VPRN-VACGWWHTL 470
              + VACGW HT+
Sbjct: 224 EKMSMVACGWRHTI 237



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 144/327 (44%), Gaps = 55/327 (16%)

Query: 85  HGEIPEPF-PLPTEA----SIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLST 139
           HG   + F PLP +A     I + A G +HC+AVT  GEV +WG  +        G L  
Sbjct: 102 HGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQN-------GQLGL 154

Query: 140 GTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTD--GRGSGEEGSKRRRISLAKQT 197
           G   D  V ++  +F   ++   +  +  +   +   D  G G G  G+    + L    
Sbjct: 155 GDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGN----LGL---- 206

Query: 198 AESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS 257
                 GD N    P  VT   G +++ VA G RHT+++S  G ++ +G+   GQLG G 
Sbjct: 207 ------GDRNDRLVPERVTSAGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGD 260

Query: 258 RIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITD 317
            +     PH +  + +S                          ++  I+ G RH+  +T 
Sbjct: 261 -LEDHLIPHKLEALSNS--------------------------FISQISGGWRHTMALTS 293

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
            G L  +GW  +GQ G G+  D+ SP  V      ++  V+ G  HT+ ++   +V+A+G
Sbjct: 294 DGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWG 353

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLE 404
               GQLG G       P++++A S++
Sbjct: 354 RGTNGQLGIGESVDRNFPKIIEALSVD 380


>gi|379318635|pdb|4DNW|A Chain A, Crystal Structure Of Uvb-Resistance Protein Uvr8
 gi|379318636|pdb|4DNW|B Chain B, Crystal Structure Of Uvb-Resistance Protein Uvr8
          Length = 374

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 126/411 (30%), Positives = 187/411 (45%), Gaps = 62/411 (15%)

Query: 49  VCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEAS------IVK 102
           +   G   ++A+     + +WG  +D GQ       HG+  E  P PT+ S      IV 
Sbjct: 8   IISAGASHSVALLSGDIVCSWGRGED-GQL-----GHGD-AEDRPSPTQLSALDGHQIVS 60

Query: 103 AAAGWAHCVAVTEGG-EVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSP 161
              G  H VA ++ G EVY+WGW +       FG L  G G   D+F          +  
Sbjct: 61  VTCGADHTVAYSQSGMEVYSWGWGD-------FGRL--GHGNSSDLFTPLPIKALHGIRI 111

Query: 162 RSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGV 221
           +      S   +   +G       ++  ++ L          GD   S  P  +    G+
Sbjct: 112 KQIACGDSHCLAVTMEGEVQSWGRNQNGQLGL----------GDTEDSLVPQKIQAFEGI 161

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
           RI  VAAG  HT A+++ G ++GWG+G  G LGLG                     DR+ 
Sbjct: 162 RIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLG---------------------DRTD 200

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL 341
            L    V S G      G  +  +ACG RH+  ++ +GAL T+GW  YGQ G G  +D L
Sbjct: 201 RLVPERVTSTG------GEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHL 254

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
            P+ + +L    I  ++ G  HT+ ++SDG +Y +G N+FGQ+G G +  +  P  +  P
Sbjct: 255 IPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP 314

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
             + V    VSCG RHT  + +   VF WG    GQLG+G+ +DRN P  +
Sbjct: 315 DDQKV--VQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKII 363



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 97/295 (32%), Positives = 147/295 (49%), Gaps = 31/295 (10%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIG-QVWGWGYGGEGQLGLGSRIRMV 262
           GD      P  ++   G +I +V  G  HT+A S  G +V+ WG+G  G+LG G+   + 
Sbjct: 39  GDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLF 98

Query: 263 SSPHPIPCIE-----------------------SSYGKDRSAALSRGSVNSEGPGFRV-- 297
           + P PI  +                         S+G++++  L  G         ++  
Sbjct: 99  T-PLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQA 157

Query: 298 -PGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG 356
             G  +K +A G  H+A +T+ G L  +GWG YG  G G   D L P  V+S  G ++  
Sbjct: 158 FEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSM 217

Query: 357 VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR 416
           VA G  HTI +S  G +Y +G +++GQLG G  +   +P  L+A  L N     +S G R
Sbjct: 218 VACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEA--LSNSFISQISGGWR 275

Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACGWWHTL 470
           HT  +  DGK++ WGWNK+GQ+G+G+ +D+  P QV   +      V+CGW HTL
Sbjct: 276 HTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTL 330



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 134/254 (52%), Gaps = 31/254 (12%)

Query: 219 PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
           P  ++  ++AG  H++AL     V  WG G +GQLG G      +   P P   S+    
Sbjct: 2   PPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGD-----AEDRPSPTQLSA---- 52

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA-LLTFGWGLYGQCGQGST 337
                             + G+ +  + CG  H+   + +G  + ++GWG +G+ G G++
Sbjct: 53  ------------------LDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNS 94

Query: 338 DDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
            D  +P  + +L GI+I+ +A G  H + ++ +G+V ++G NQ GQLG G  +   +P+ 
Sbjct: 95  SDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQK 154

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC 457
           + A   E +  K V+ GA HTA + +DG ++ WGW +YG LGLGD  DR +P +VT  G 
Sbjct: 155 IQA--FEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGG 212

Query: 458 VPRN-VACGWWHTL 470
              + VACGW HT+
Sbjct: 213 EKMSMVACGWRHTI 226



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 86/325 (26%), Positives = 141/325 (43%), Gaps = 51/325 (15%)

Query: 85  HGEIPEPF-PLPTEA----SIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLST 139
           HG   + F PLP +A     I + A G +HC+AVT  GEV +WG  +        G L  
Sbjct: 91  HGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQN-------GQLGL 143

Query: 140 GTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAE 199
           G   D  V ++  +F  E +  +   + +    +   DG   G    +   + L      
Sbjct: 144 GDTEDSLVPQKIQAF--EGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGL------ 195

Query: 200 SSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
               GD      P  VT   G +++ VA G RHT+++S  G ++ +G+   GQLG G  +
Sbjct: 196 ----GDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGD-L 250

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAG 319
                PH +  + +S                          ++  I+ G RH+  +T  G
Sbjct: 251 EDHLIPHKLEALSNS--------------------------FISQISGGWRHTMALTSDG 284

Query: 320 ALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN 379
            L  +GW  +GQ G G+  D+ SP  V      ++  V+ G  HT+ ++   +V+A+G  
Sbjct: 285 KLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRG 344

Query: 380 QFGQLGTGGDQAETLPRLLDAPSLE 404
             GQLG G       P++++A S++
Sbjct: 345 TNGQLGIGESVDRNFPKIIEALSVD 369


>gi|168052711|ref|XP_001778783.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162669789|gb|EDQ56369.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 461

 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 119/403 (29%), Positives = 182/403 (45%), Gaps = 50/403 (12%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
           G   ++A+     + +WG  +D GQ      +    P       +  I     G  H  A
Sbjct: 22  GASHSVALLSGDLVCSWGRGED-GQLGHGDAEERHFPTIVSALDDCEISSVTCGADHTTA 80

Query: 113 VTEGGE-VYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG 171
           ++   + VY+WGW +       FG L  G G   D+F  Q     + +  +      S  
Sbjct: 81  LSNSTKTVYSWGWGD-------FGRL--GHGNSSDLFIPQPIKALKGLEVKQIACGDSHC 131

Query: 172 TSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGR 231
            +  TDG   G   ++  ++ L          G       P  +T   GV +  +AAG  
Sbjct: 132 LAITTDGEVLGWGRNQNGQLGL----------GHTEDVLTPHKLTAFEGVAVKMLAAGAE 181

Query: 232 HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
           HT A+++ G+++GWG+G  G LGLG R             E     D+ AA         
Sbjct: 182 HTTAVTENGKLYGWGWGRYGNLGLGDR-------------EDRLVPDQVAA--------- 219

Query: 292 GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                V G  +K +ACG RH+  + ++G + TFGW  YGQ G G   D L P+ V +L  
Sbjct: 220 -----VAGELMKMVACGWRHTICVAESGNMYTFGWSKYGQLGHGDFADHLIPHQVQALKS 274

Query: 352 IQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSV 411
            +I+ +  G  HT  + SDG +Y +G N+FGQ+G G  + ++ P+L+    L++     V
Sbjct: 275 KKIQAITGGWRHTFALDSDGRLYGWGWNKFGQVGCGNTEDQSSPQLV--KGLQDQVVTVV 332

Query: 412 SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI 454
            CG RHT  + D G V+ WG    GQLG GD +DR+ P ++ I
Sbjct: 333 QCGWRHTLAMTDRGNVYSWGRGTSGQLGHGDTVDRSTPKRIEI 375



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/263 (33%), Positives = 136/263 (51%), Gaps = 30/263 (11%)

Query: 211 FPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPC 270
            P  +    G+ +  +A G  H LA++  G+V GWG    GQLGLG     V +PH +  
Sbjct: 109 IPQPIKALKGLEVKQIACGDSHCLAITTDGEVLGWGRNQNGQLGLG-HTEDVLTPHKLTA 167

Query: 271 IESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
            E                          G  VK +A G  H+  +T+ G L  +GWG YG
Sbjct: 168 FE--------------------------GVAVKMLAAGAEHTTAVTENGKLYGWGWGRYG 201

Query: 331 QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
             G G  +D L P+ V+++ G  ++ VA G  HTIC++  G++Y FG +++GQLG G   
Sbjct: 202 NLGLGDREDRLVPDQVAAVAGELMKMVACGWRHTICVAESGNMYTFGWSKYGQLGHGDFA 261

Query: 391 AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
              +P  + A  L++   ++++ G RHT  +  DG+++ WGWNK+GQ+G G+  D++ P 
Sbjct: 262 DHLIPHQVQA--LKSKKIQAITGGWRHTFALDSDGRLYGWGWNKFGQVGCGNTEDQSSPQ 319

Query: 451 QVT-IEGCVPRNVACGWWHTLLL 472
            V  ++  V   V CGW HTL +
Sbjct: 320 LVKGLQDQVVTVVQCGWRHTLAM 342



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 87/258 (33%), Positives = 136/258 (52%), Gaps = 33/258 (12%)

Query: 220 GVR--IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
           GVR  +  ++AG  H++AL     V  WG G +GQLG G      +     P I S    
Sbjct: 11  GVRRQVLALSAGASHSVALLSGDLVCSWGRGEDGQLGHGD-----AEERHFPTIVS---- 61

Query: 278 DRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDA-GALLTFGWGLYGQCGQGS 336
               AL    ++S              + CG  H+  ++++   + ++GWG +G+ G G+
Sbjct: 62  ----ALDDCEISS--------------VTCGADHTTALSNSTKTVYSWGWGDFGRLGHGN 103

Query: 337 TDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPR 396
           + D   P  + +L G++++ +A G  H + I++DG+V  +G NQ GQLG G  +    P 
Sbjct: 104 SSDLFIPQPIKALKGLEVKQIACGDSHCLAITTDGEVLGWGRNQNGQLGLGHTEDVLTPH 163

Query: 397 LLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIE 455
            L A   E V  K ++ GA HT  + ++GK++ WGW +YG LGLGD  DR +P QV  + 
Sbjct: 164 KLTA--FEGVAVKMLAAGAEHTTAVTENGKLYGWGWGRYGNLGLGDREDRLVPDQVAAVA 221

Query: 456 GCVPRNVACGWWHTLLLA 473
           G + + VACGW HT+ +A
Sbjct: 222 GELMKMVACGWRHTICVA 239



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 73/302 (24%), Positives = 115/302 (38%), Gaps = 57/302 (18%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
           G    +AI+   +++ WG   + GQ  +   +    P         ++   AAG  H  A
Sbjct: 127 GDSHCLAITTDGEVLGWGRNQN-GQLGLGHTEDVLTPHKLTAFEGVAVKMLAAGAEHTTA 185

Query: 113 VTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSP-----RSQVSR 167
           VTE G++Y WGW      GR +G+L  G   D+ V ++ ++   E +       R  +  
Sbjct: 186 VTENGKLYGWGW------GR-YGNLGLGDREDRLVPDQVAAVAGELMKMVACGWRHTICV 238

Query: 168 SSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVA 227
           +  G          G+ G                  GD      P  V      +I  + 
Sbjct: 239 AESGNMYTFGWSKYGQLGH-----------------GDFADHLIPHQVQALKSKKIQAIT 281

Query: 228 AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGS 287
            G RHT AL   G+++GWG+   GQ+G G+     SSP  +  ++               
Sbjct: 282 GGWRHTFALDSDGRLYGWGWNKFGQVGCGN-TEDQSSPQLVKGLQD-------------- 326

Query: 288 VNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVS 347
                         V  + CG RH+  +TD G + ++G G  GQ G G T D  +P  + 
Sbjct: 327 ------------QVVTVVQCGWRHTLAMTDRGNVYSWGRGTSGQLGHGDTVDRSTPKRIE 374

Query: 348 SL 349
            L
Sbjct: 375 IL 376


>gi|379318630|pdb|4DNU|A Chain A, Crystal Structure Of The W285a Mutant Of Uvb-Resistance
           Protein Uvr8
          Length = 372

 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 131/411 (31%), Positives = 189/411 (45%), Gaps = 62/411 (15%)

Query: 49  VCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEAS------IVK 102
           +   G   ++A+     + +WG  +D GQ       HG+  E  P PT+ S      IV 
Sbjct: 10  IISAGASHSVALLSGDIVCSWGRGED-GQL-----GHGD-AEDRPSPTQLSALDGHQIVS 62

Query: 103 AAAGWAHCVAVTEGG-EVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSP 161
              G  H VA ++ G EVY+WGW +       FG L  G G   D+F    + L  +   
Sbjct: 63  VTCGADHTVAYSQSGXEVYSWGWGD-------FGRL--GHGNSSDLF----TPLPIKALH 109

Query: 162 RSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGV 221
             ++ + + G S        GE  S  R      Q  +    GD   S  P  +    G+
Sbjct: 110 GIRIKQIACGDSHCLAVTXEGEVQSWGR-----NQNGQ-LGLGDTEDSLVPQKIQAFEGI 163

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
           RI  VAAG  HT A+++ G ++GWG+G  G LGLG                     DR+ 
Sbjct: 164 RIKXVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLG---------------------DRTD 202

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL 341
            L    V S G      G     +ACG RH+  ++ +GAL T+GW  YGQ G G  +D L
Sbjct: 203 RLVPERVTSTG------GEKXSXVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHL 256

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
            P+ + +L    I  ++ G  HT  ++SDG +Y +G N+FGQ+G G +  +  P  +  P
Sbjct: 257 IPHKLEALSNSFISQISGGARHTXALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP 316

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
             + V    VSCG RHT  + +   VF WG    GQLG+G+ +DRN P  +
Sbjct: 317 DDQKV--VQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKII 365



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/262 (35%), Positives = 130/262 (49%), Gaps = 30/262 (11%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P  +    G+RI  +A G  H LA++  G+V  WG    GQLGLG     +  P  I   
Sbjct: 102 PLPIKALHGIRIKQIACGDSHCLAVTXEGEVQSWGRNQNGQLGLGDTEDSLV-PQKIQAF 160

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
           E                          G  +K +A G  H+A +T+ G L  +GWG YG 
Sbjct: 161 E--------------------------GIRIKXVAAGAEHTAAVTEDGDLYGWGWGRYGN 194

Query: 332 CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
            G G   D L P  V+S  G +   VA G  HTI +S  G +Y +G +++GQLG G  + 
Sbjct: 195 LGLGDRTDRLVPERVTSTGGEKXSXVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLED 254

Query: 392 ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
             +P  L+A  L N     +S GARHT  +  DGK++ WGWNK+GQ+G+G+ +D+  P Q
Sbjct: 255 HLIPHKLEA--LSNSFISQISGGARHTXALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQ 312

Query: 452 VTI-EGCVPRNVACGWWHTLLL 472
           V   +      V+CGW HTL +
Sbjct: 313 VRFPDDQKVVQVSCGWRHTLAV 334



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 134/254 (52%), Gaps = 31/254 (12%)

Query: 219 PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
           P  ++  ++AG  H++AL     V  WG G +GQLG G      +   P P   S+    
Sbjct: 4   PPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGD-----AEDRPSPTQLSA---- 54

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA-LLTFGWGLYGQCGQGST 337
                             + G+ +  + CG  H+   + +G  + ++GWG +G+ G G++
Sbjct: 55  ------------------LDGHQIVSVTCGADHTVAYSQSGXEVYSWGWGDFGRLGHGNS 96

Query: 338 DDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
            D  +P  + +L GI+I+ +A G  H + ++ +G+V ++G NQ GQLG G  +   +P+ 
Sbjct: 97  SDLFTPLPIKALHGIRIKQIACGDSHCLAVTXEGEVQSWGRNQNGQLGLGDTEDSLVPQK 156

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC 457
           + A   E +  K V+ GA HTA + +DG ++ WGW +YG LGLGD  DR +P +VT  G 
Sbjct: 157 IQA--FEGIRIKXVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGG 214

Query: 458 VPRN-VACGWWHTL 470
              + VACGW HT+
Sbjct: 215 EKXSXVACGWRHTI 228


>gi|357149503|ref|XP_003575134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
           distachyon]
          Length = 448

 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 125/385 (32%), Positives = 178/385 (46%), Gaps = 49/385 (12%)

Query: 90  EPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFE 149
           E  P   E ++   +AG  H VA+     V +WG  E        G L  G   D+ V  
Sbjct: 12  EEVPEAPEQTVALVSAGANHSVALLSSKAVCSWGRGE-------DGQLGHGDAEDRPVPT 64

Query: 150 RQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLS 209
             S F    ++  S V   +  T++ +D         + +  S           G+ +  
Sbjct: 65  LLSGFDVPGIA--SVVICGADHTTAYSD--------EQMQLYSWGWGDFGRLGHGNSSDV 114

Query: 210 AFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP 269
             P  +    G++I  +A G  H LA++D GQV  WG    GQLGLG+    +  P  I 
Sbjct: 115 FHPQPIEALQGIKIKQIACGDSHCLAVTDAGQVHSWGRNQNGQLGLGNTEDSLL-PQKIH 173

Query: 270 CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
             E                          G  VK IA G  H+A I + G L  +GWG Y
Sbjct: 174 AFE--------------------------GVCVKMIAAGAEHTAAILEDGDLYGWGWGQY 207

Query: 330 GQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD 389
           G  G G  +D L P  VSS+ G ++  VA G  HT+ +SS GD+Y +G +++GQLG G  
Sbjct: 208 GNLGLGDRNDRLVPEKVSSVEGEKMVLVACGWRHTVTVSSSGDLYTYGWSKYGQLGHGDF 267

Query: 390 QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIP 449
           +   +P  L+A  L++     ++ G RHT  +A DGK++ WGWNK+GQ+G+ D +D   P
Sbjct: 268 EDHLVPHKLEA--LKDRFISQIAGGWRHTMAVAGDGKLYGWGWNKFGQVGVADNVDHCSP 325

Query: 450 SQVTI--EGCVPRNVACGWWHTLLL 472
            QV    E  V + VACGW HTL L
Sbjct: 326 VQVIFPDEQKVAQ-VACGWRHTLAL 349



 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 125/419 (29%), Positives = 195/419 (46%), Gaps = 62/419 (14%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEP-----FPLPTEASIVKAAAGW 107
           G   ++A+  S+ + +WG  +D GQ  +  G   + P P     F +P  AS+V   A  
Sbjct: 28  GANHSVALLSSKAVCSWGRGED-GQ--LGHGDAEDRPVPTLLSGFDVPGIASVVICGAD- 83

Query: 108 AHCVAVT-EGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVS 166
            H  A + E  ++Y+WGW +       FG L  G G   DVF  Q     + +    ++ 
Sbjct: 84  -HTTAYSDEQMQLYSWGWGD-------FGRL--GHGNSSDVFHPQPIEALQGI----KIK 129

Query: 167 RSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATV 226
           + + G S       +G+  S  R      Q  +      E+ S  P  +    GV +  +
Sbjct: 130 QIACGDSHCLAVTDAGQVHSWGR-----NQNGQLGLGNTED-SLLPQKIHAFEGVCVKMI 183

Query: 227 AAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRG 286
           AAG  HT A+ + G ++GWG+G  G LGLG                     DR+  L   
Sbjct: 184 AAGAEHTAAILEDGDLYGWGWGQYGNLGLG---------------------DRNDRLVPE 222

Query: 287 SVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCV 346
            V+S      V G  +  +ACG RH+  ++ +G L T+GW  YGQ G G  +D L P+ +
Sbjct: 223 KVSS------VEGEKMVLVACGWRHTVTVSSSGDLYTYGWSKYGQLGHGDFEDHLVPHKL 276

Query: 347 SSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENV 406
            +L    I  +A G  HT+ ++ DG +Y +G N+FGQ+G   +     P  +  P  + V
Sbjct: 277 EALKDRFISQIAGGWRHTMAVAGDGKLYGWGWNKFGQVGVADNVDHCSPVQVIFPDEQKV 336

Query: 407 HSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV---TIEGCVPRNV 462
               V+CG RHT  + ++  VF WG    GQLG G++IDRN P  +   +++G   +N+
Sbjct: 337 --AQVACGWRHTLALTENKNVFSWGRGTSGQLGHGEIIDRNTPKMIDALSLDGYACKNL 393



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 92/257 (35%), Positives = 136/257 (52%), Gaps = 30/257 (11%)

Query: 219 PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
           P   +A V+AG  H++AL     V  WG G +GQLG G      +   P+P + S     
Sbjct: 18  PEQTVALVSAGANHSVALLSSKAVCSWGRGEDGQLGHGD-----AEDRPVPTLLS----- 67

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA-LLTFGWGLYGQCGQGST 337
                          GF VPG     + CG  H+   +D    L ++GWG +G+ G G++
Sbjct: 68  ---------------GFDVPG-IASVVICGADHTTAYSDEQMQLYSWGWGDFGRLGHGNS 111

Query: 338 DDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
            D   P  + +L GI+I+ +A G  H + ++  G V+++G NQ GQLG G  +   LP+ 
Sbjct: 112 SDVFHPQPIEALQGIKIKQIACGDSHCLAVTDAGQVHSWGRNQNGQLGLGNTEDSLLPQK 171

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEG 456
           + A   E V  K ++ GA HTA I +DG ++ WGW +YG LGLGD  DR +P +V ++EG
Sbjct: 172 IHA--FEGVCVKMIAAGAEHTAAILEDGDLYGWGWGQYGNLGLGDRNDRLVPEKVSSVEG 229

Query: 457 CVPRNVACGWWHTLLLA 473
                VACGW HT+ ++
Sbjct: 230 EKMVLVACGWRHTVTVS 246


>gi|224093583|ref|XP_002309939.1| predicted protein [Populus trichocarpa]
 gi|222852842|gb|EEE90389.1| predicted protein [Populus trichocarpa]
          Length = 444

 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 126/410 (30%), Positives = 185/410 (45%), Gaps = 62/410 (15%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEAS------IVKAAAG 106
           G   ++A+     + +WG  +D GQ       HG+  E  P PT+ S      I+    G
Sbjct: 26  GASHSVALLSGNIVCSWGRGED-GQL-----GHGD-AEDRPTPTQLSTLDGLDIISITCG 78

Query: 107 WAHCVAVTEGG-EVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQV 165
             H  + +E   EVY+WGW +       FG L  G G   D+F  Q       +  R   
Sbjct: 79  ADHTTSYSESRMEVYSWGWGD-------FGRL--GHGNSSDLFTPQPIKALHSLKIRQIA 129

Query: 166 SRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIAT 225
              S   +   DG       ++  ++ L          G    S  P  +    GV I  
Sbjct: 130 CGDSHCLAVTMDGEVQSWGRNQNGQLGL----------GTTEDSLVPQKIQAFQGVSIKM 179

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
           VAAG  HT A+++ G+++GWG+G  G LGLG R                   DR      
Sbjct: 180 VAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDR------------------NDRLVPEKV 221

Query: 286 GSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNC 345
             VN         G+ +  +ACG RH+  ++ +G L T+GW  YGQ G G  +D L+P+ 
Sbjct: 222 SLVN---------GDKMIMVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDFEDHLTPHK 272

Query: 346 VSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLEN 405
           V +L    I  ++ G  HT+ ++SDG++Y +G N+FGQ+G G +     P  +  P  E 
Sbjct: 273 VEALRDSYISMISGGWRHTMALTSDGNLYGWGWNKFGQVGVGDNIDHCSPVQVKFPH-EQ 331

Query: 406 VHS-KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI 454
            HS   +SCG RHT  I +   VF WG    GQLG G+ +DRN+P  + +
Sbjct: 332 AHSLVQISCGWRHTLAITERQNVFSWGRGTNGQLGHGESMDRNLPKIIEV 381



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 94/299 (31%), Positives = 149/299 (49%), Gaps = 33/299 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIG-QVWGWGYGGEGQLGLGSRIRMV 262
           GD      P  ++   G+ I ++  G  HT + S+   +V+ WG+G  G+LG G+   + 
Sbjct: 53  GDAEDRPTPTQLSTLDGLDIISITCGADHTTSYSESRMEVYSWGWGDFGRLGHGNSSDLF 112

Query: 263 SSPHPIPCIES-----------------------SYGKDRSAALSRGSVNSEGPGFRVP- 298
           + P PI  + S                       S+G++++  L  G+        ++  
Sbjct: 113 T-PQPIKALHSLKIRQIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQA 171

Query: 299 --GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG 356
             G  +K +A G  H+A +T+ G L  +GWG YG  G G  +D L P  VS + G ++  
Sbjct: 172 FQGVSIKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVPEKVSLVNGDKMIM 231

Query: 357 VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR 416
           VA G  HTI +SS G +Y +G +++GQLG G  +    P  ++A  L + +   +S G R
Sbjct: 232 VACGWRHTISVSSSGGLYTYGWSKYGQLGHGDFEDHLTPHKVEA--LRDSYISMISGGWR 289

Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI---EGCVPRNVACGWWHTLLL 472
           HT  +  DG ++ WGWNK+GQ+G+GD ID   P QV     +      ++CGW HTL +
Sbjct: 290 HTMALTSDGNLYGWGWNKFGQVGVGDNIDHCSPVQVKFPHEQAHSLVQISCGWRHTLAI 348



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/254 (31%), Positives = 132/254 (51%), Gaps = 31/254 (12%)

Query: 219 PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
           P  ++  ++AG  H++AL     V  WG G +GQLG G      +   P P   S+    
Sbjct: 16  PIRQVILISAGASHSVALLSGNIVCSWGRGEDGQLGHGD-----AEDRPTPTQLST---- 66

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA-LLTFGWGLYGQCGQGST 337
                             + G  +  I CG  H+   +++   + ++GWG +G+ G G++
Sbjct: 67  ------------------LDGLDIISITCGADHTTSYSESRMEVYSWGWGDFGRLGHGNS 108

Query: 338 DDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
            D  +P  + +L  ++I  +A G  H + ++ DG+V ++G NQ GQLG G  +   +P+ 
Sbjct: 109 SDLFTPQPIKALHSLKIRQIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQK 168

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEG 456
           + A   + V  K V+ GA HTA + +DG+++ WGW +YG LGLGD  DR +P +V+ + G
Sbjct: 169 IQA--FQGVSIKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVPEKVSLVNG 226

Query: 457 CVPRNVACGWWHTL 470
                VACGW HT+
Sbjct: 227 DKMIMVACGWRHTI 240


>gi|5478530|gb|AAD43920.1|AF130441_1 UVB-resistance protein UVR8 [Arabidopsis thaliana]
          Length = 440

 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 125/411 (30%), Positives = 186/411 (45%), Gaps = 62/411 (15%)

Query: 49  VCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEAS------IVK 102
           +   G   ++A+     + +WG  +D GQ       HG+  E  P PT+ S      IV 
Sbjct: 19  IISAGASHSVALLSGDIVCSWGRGED-GQL-----GHGD-AEDRPSPTQLSALDGHQIVS 71

Query: 103 AAAGWAHCVAVTEGG-EVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSP 161
              G  H VA ++ G EVY+WGW +       FG L  G G   D+F          +  
Sbjct: 72  VTCGADHTVAYSQSGMEVYSWGWGD-------FGRL--GHGNSSDLFTPLPIKALHGIRI 122

Query: 162 RSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGV 221
           +      S   +   +G       ++  ++ L          GD   S  P  +    G+
Sbjct: 123 KQIACGDSHCLAVTMEGEVQSWGRNQNGQLGL----------GDTEDSLVPQKIQAFEGI 172

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
            I  VAAG  HT A+++ G ++GWG+G  G LGLG                     DR+ 
Sbjct: 173 PIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLG---------------------DRTD 211

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL 341
            L    V S G      G  +  +ACG RH+  ++ +GAL T+GW  YGQ G G  +D L
Sbjct: 212 RLVPERVTSTG------GEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHL 265

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
            P+ + +L    I  ++ G  HT+ ++SDG +Y +G N+FGQ+G G +  +  P  +  P
Sbjct: 266 IPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP 325

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
             + V    VSCG RHT  + +   VF WG    GQLG+G+ +DRN P  +
Sbjct: 326 DDQKV--VQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKII 374



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 92/262 (35%), Positives = 130/262 (49%), Gaps = 30/262 (11%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P  +    G+RI  +A G  H LA++  G+V  WG    GQLGLG     +  P  I   
Sbjct: 111 PLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLV-PQKIQAF 169

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
           E                          G  +K +A G  H+A +T+ G L  +GWG YG 
Sbjct: 170 E--------------------------GIPIKMVAAGAEHTAAVTEDGDLYGWGWGRYGN 203

Query: 332 CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
            G G   D L P  V+S  G ++  VA G  HTI +S  G +Y +G +++GQLG G  + 
Sbjct: 204 LGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLED 263

Query: 392 ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
             +P  L+A  L N     +S G RHT  +  DGK++ WGWNK+GQ+G+G+ +D+  P Q
Sbjct: 264 HLIPHKLEA--LSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQ 321

Query: 452 VTI-EGCVPRNVACGWWHTLLL 472
           V   +      V+CGW HTL +
Sbjct: 322 VRFPDDQKVVQVSCGWRHTLAV 343



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 134/254 (52%), Gaps = 31/254 (12%)

Query: 219 PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
           P  ++  ++AG  H++AL     V  WG G +GQLG G      +   P P   S+    
Sbjct: 13  PPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGD-----AEDRPSPTQLSA---- 63

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA-LLTFGWGLYGQCGQGST 337
                             + G+ +  + CG  H+   + +G  + ++GWG +G+ G G++
Sbjct: 64  ------------------LDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNS 105

Query: 338 DDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
            D  +P  + +L GI+I+ +A G  H + ++ +G+V ++G NQ GQLG G  +   +P+ 
Sbjct: 106 SDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQK 165

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC 457
           + A   E +  K V+ GA HTA + +DG ++ WGW +YG LGLGD  DR +P +VT  G 
Sbjct: 166 IQA--FEGIPIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGG 223

Query: 458 VPRN-VACGWWHTL 470
              + VACGW HT+
Sbjct: 224 EKMSMVACGWRHTI 237



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 89/333 (26%), Positives = 146/333 (43%), Gaps = 53/333 (15%)

Query: 85  HGEIPEPF-PLPTEA----SIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLST 139
           HG   + F PLP +A     I + A G +HC+AVT  GEV +WG  +        G L  
Sbjct: 102 HGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQN-------GQLGL 154

Query: 140 GTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGT-DGRGSGEEGSKRRRISLAKQTA 198
           G   D  V ++  +F   +  P   V+  +  T++ T DG   G    +   + L     
Sbjct: 155 GDTEDSLVPQKIQAF---EGIPIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGL----- 206

Query: 199 ESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR 258
                GD      P  VT   G +++ VA G RHT+++S  G ++ +G+   GQLG G  
Sbjct: 207 -----GDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGD- 260

Query: 259 IRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDA 318
           +     PH +  + +S                          ++  I+ G RH+  +T  
Sbjct: 261 LEDHLIPHKLEALSNS--------------------------FISQISGGWRHTMALTSD 294

Query: 319 GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           G L  +GW  +GQ G G+  D+ SP  V      ++  V+ G  HT+ ++   +V+A+G 
Sbjct: 295 GKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGR 354

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSV 411
              GQLG G       P++++A S++    + +
Sbjct: 355 GTNGQLGIGESVDRNFPKIIEALSVDGASGQHI 387


>gi|312282233|dbj|BAJ33982.1| unnamed protein product [Thellungiella halophila]
          Length = 440

 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 120/405 (29%), Positives = 180/405 (44%), Gaps = 50/405 (12%)

Query: 49  VCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWA 108
           +   G   ++A+     + +WG  +D GQ      +    P       +  IV    G  
Sbjct: 19  IISAGASHSVALLSGDIVCSWGRGED-GQLGHGDAEDRLSPTQLSALDDHQIVSVTCGAD 77

Query: 109 HCVAVTEGG-EVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSR 167
           H VA +E   EVY+WGW +       FG L  G G   D+F          +  +     
Sbjct: 78  HTVAYSESRMEVYSWGWGD-------FGRL--GHGNSSDLFTPLPIKALHGIRIKQIACG 128

Query: 168 SSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVA 227
            S   +   +G       ++  ++ L          GD   S  P  +    G+RI  VA
Sbjct: 129 DSHCLAVTMEGEVQSWGRNQNGQLGL----------GDTEDSLVPQKIQAFEGIRIKMVA 178

Query: 228 AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGS 287
           AG  HT A+++ G ++GWG+G  G LGLG                     DR+  L    
Sbjct: 179 AGAEHTAAVTEDGDLYGWGWGRYGNLGLG---------------------DRNDRLVPER 217

Query: 288 VNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVS 347
           V S G      G  +  +ACG RH+  ++ +GAL T+GW  YGQ G G  +D L P+ + 
Sbjct: 218 VTSAG------GEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLVPHKLE 271

Query: 348 SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVH 407
           +L    I  ++ G  HT+ ++SDG +Y +G N+FGQ+G G +  +  P  +  P  + V 
Sbjct: 272 ALGNSVISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRIPDDQKV- 330

Query: 408 SKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
              VSCG RHT  + +   VF WG    GQLG+G+ +DRN P  +
Sbjct: 331 -VQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESLDRNFPKII 374



 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 94/262 (35%), Positives = 133/262 (50%), Gaps = 30/262 (11%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P  +    G+RI  +A G  H LA++  G+V  WG    GQLGLG     +  P  I   
Sbjct: 111 PLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLV-PQKIQAF 169

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
           E                     G R+     K +A G  H+A +T+ G L  +GWG YG 
Sbjct: 170 E---------------------GIRI-----KMVAAGAEHTAAVTEDGDLYGWGWGRYGN 203

Query: 332 CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
            G G  +D L P  V+S  G ++  VA G  HTI +S  G +Y +G +++GQLG G  + 
Sbjct: 204 LGLGDRNDRLVPERVTSAGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLED 263

Query: 392 ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
             +P  L+A  L N     +S G RHT  +  DGK++ WGWNK+GQ+G+G+ +D+  P Q
Sbjct: 264 HLVPHKLEA--LGNSVISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQ 321

Query: 452 VTI-EGCVPRNVACGWWHTLLL 472
           V I +      V+CGW HTL +
Sbjct: 322 VRIPDDQKVVQVSCGWRHTLAV 343



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/271 (31%), Positives = 134/271 (49%), Gaps = 31/271 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIG-QVWGWGYGGEGQLGLGSRIRMV 262
           GD      P  ++     +I +V  G  HT+A S+   +V+ WG+G  G+LG G+   + 
Sbjct: 50  GDAEDRLSPTQLSALDDHQIVSVTCGADHTVAYSESRMEVYSWGWGDFGRLGHGNSSDLF 109

Query: 263 SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL 322
           + P PI  +                      G R+     K IACG  H   +T  G + 
Sbjct: 110 T-PLPIKALH---------------------GIRI-----KQIACGDSHCLAVTMEGEVQ 142

Query: 323 TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFG 382
           ++G    GQ G G T+D L P  + +  GI+I+ VAAG  HT  ++ DGD+Y +G  ++G
Sbjct: 143 SWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYG 202

Query: 383 QLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGD 442
            LG G      +P  + +   E +    V+CG RHT  ++  G ++ +GW+KYGQLG GD
Sbjct: 203 NLGLGDRNDRLVPERVTSAGGEKM--SMVACGWRHTISVSYSGALYTYGWSKYGQLGHGD 260

Query: 443 VIDRNIPSQVTIEG-CVPRNVACGWWHTLLL 472
           + D  +P ++   G  V   ++ GW HT+ L
Sbjct: 261 LEDHLVPHKLEALGNSVISQISGGWRHTMAL 291



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 97/362 (26%), Positives = 155/362 (42%), Gaps = 66/362 (18%)

Query: 53  GCGFAMAISDSRKLIT---WGSTDDLGQSYVTSGKHGEIPEPF-PLPTEA----SIVKAA 104
           G    +A S+SR  +    WG    LG        HG   + F PLP +A     I + A
Sbjct: 75  GADHTVAYSESRMEVYSWGWGDFGRLG--------HGNSSDLFTPLPIKALHGIRIKQIA 126

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G +HC+AVT  GEV +WG  +        G L  G   D  V ++  +F   ++   + 
Sbjct: 127 CGDSHCLAVTMEGEVQSWGRNQN-------GQLGLGDTEDSLVPQKIQAFEGIRIKMVAA 179

Query: 165 VSRSSGGTSSGTD--GRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVR 222
            +  +   +   D  G G G  G+    + L          GD N    P  VT   G +
Sbjct: 180 GAEHTAAVTEDGDLYGWGWGRYGN----LGL----------GDRNDRLVPERVTSAGGEK 225

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           ++ VA G RHT+++S  G ++ +G+   GQLG G  +     PH +  + +S        
Sbjct: 226 MSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGD-LEDHLVPHKLEALGNS-------- 276

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                              +  I+ G RH+  +T  G L  +GW  +GQ G G+  D+ S
Sbjct: 277 ------------------VISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCS 318

Query: 343 PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPS 402
           P  V      ++  V+ G  HT+ ++   +V+A+G    GQLG G       P++++A S
Sbjct: 319 PVQVRIPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESLDRNFPKIIEALS 378

Query: 403 LE 404
           ++
Sbjct: 379 VD 380


>gi|115458498|ref|NP_001052849.1| Os04g0435700 [Oryza sativa Japonica Group]
 gi|32487442|emb|CAE02741.1| OSJNBa0006B20.1 [Oryza sativa Japonica Group]
 gi|113564420|dbj|BAF14763.1| Os04g0435700 [Oryza sativa Japonica Group]
 gi|125548381|gb|EAY94203.1| hypothetical protein OsI_15977 [Oryza sativa Indica Group]
 gi|125590466|gb|EAZ30816.1| hypothetical protein OsJ_14886 [Oryza sativa Japonica Group]
 gi|215704772|dbj|BAG94800.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 453

 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 97/262 (37%), Positives = 132/262 (50%), Gaps = 30/262 (11%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P  V    G++I  +A G  H LA++  G+V  WG    GQLGLG+    +  P  I   
Sbjct: 120 PQPVKALQGIKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLL-PQKIQSF 178

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
           E                          G  VK IA G  H+A +T+ G L  +GWG YG 
Sbjct: 179 E--------------------------GVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGN 212

Query: 332 CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
            G G  +D L P  VSS+ G ++  +A G  HTI +SS G +Y +G +++GQLG G  + 
Sbjct: 213 LGLGDRNDRLVPEKVSSVEGEKMVLIACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFED 272

Query: 392 ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
             +P  L+A  L++     +S G RHT  +  DGK++ WGWNK+GQ+G+GD  D   P Q
Sbjct: 273 HLVPHKLEA--LKDSSISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDTDDHCFPVQ 330

Query: 452 VTI-EGCVPRNVACGWWHTLLL 472
           V   E      VACGW HTL  
Sbjct: 331 VKFPEDQKVAQVACGWRHTLAF 352



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 130/423 (30%), Positives = 190/423 (44%), Gaps = 70/423 (16%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAA------- 105
           G   ++A+     L +WG  +D GQ       HG+  +   +PT  S   AAA       
Sbjct: 30  GASHSVALLAGNVLCSWGRGED-GQL-----GHGDAEDRL-VPTVLSGFDAAAPGITSVI 82

Query: 106 -GWAHCVAVTEG-GEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRS 163
            G  H  A +E   +VY+WGW +       FG L  G G   DVF  Q     + +    
Sbjct: 83  CGADHTTAYSEDEQQVYSWGWGD-------FGRL--GHGNSSDVFTPQPVKALQGI---- 129

Query: 164 QVSRSSGGTSSGTDGRGSGEEGS--KRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGV 221
           ++ + + G S       +GE  S  + +   L   T E S          P  +    GV
Sbjct: 130 KIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDS--------LLPQKIQSFEGV 181

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
            +  +AAG  HT A+++ G ++GWG+G  G LGLG                     DR+ 
Sbjct: 182 CVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLG---------------------DRND 220

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL 341
            L    V+S      V G  +  IACG RH+  ++ +G+L T+GW  YGQ G G  +D L
Sbjct: 221 RLVPEKVSS------VEGEKMVLIACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHL 274

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
            P+ + +L    I  ++ G  HT+ ++SDG +Y +G N+FGQ+G G       P  +  P
Sbjct: 275 VPHKLEALKDSSISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDTDDHCFPVQVKFP 334

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRN 461
             + V    V+CG RHT    +   VF WG    GQLG G+++DRN P  V I+   P  
Sbjct: 335 EDQKV--AQVACGWRHTLAFTEKKNVFSWGRGTSGQLGHGEIVDRNKP--VMIDALSPDG 390

Query: 462 VAC 464
             C
Sbjct: 391 PGC 393



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 84/258 (32%), Positives = 134/258 (51%), Gaps = 29/258 (11%)

Query: 218 NPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
           +P   +  V+AG  H++AL     +  WG G +GQLG G                    +
Sbjct: 19  DPPPAVVLVSAGASHSVALLAGNVLCSWGRGEDGQLGHGD------------------AE 60

Query: 278 DRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVIT-DAGALLTFGWGLYGQCGQGS 336
           DR         ++  PG       +  + CG  H+   + D   + ++GWG +G+ G G+
Sbjct: 61  DRLVPTVLSGFDAAAPG-------ITSVICGADHTTAYSEDEQQVYSWGWGDFGRLGHGN 113

Query: 337 TDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPR 396
           + D  +P  V +L GI+I+ +A G  H + ++  G+V ++G NQ GQLG G  +   LP+
Sbjct: 114 SSDVFTPQPVKALQGIKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQ 173

Query: 397 LLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIE 455
            +   S E V  K ++ GA HTA + +DG ++ WGW +YG LGLGD  DR +P +V ++E
Sbjct: 174 KIQ--SFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPEKVSSVE 231

Query: 456 GCVPRNVACGWWHTLLLA 473
           G     +ACGW HT+ ++
Sbjct: 232 GEKMVLIACGWRHTITVS 249



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 2/120 (1%)

Query: 357 VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR 416
           V+AG  H++ + +   + ++G  + GQLG G  +   +P +L           SV CGA 
Sbjct: 27  VSAGASHSVALLAGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAAAPGITSVICGAD 86

Query: 417 H-TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLAV 474
           H TA   D+ +V+ WGW  +G+LG G+  D   P  V  ++G   + +ACG  H L + +
Sbjct: 87  HTTAYSEDEQQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGIKIKQIACGDSHCLAVTM 146


>gi|255074379|ref|XP_002500864.1| predicted protein [Micromonas sp. RCC299]
 gi|226516127|gb|ACO62122.1| predicted protein [Micromonas sp. RCC299]
          Length = 265

 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 98/260 (37%), Positives = 138/260 (53%), Gaps = 40/260 (15%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           + +  VAAG RH+LALS  G V+ WG    GQLGLG        P P+    +S G+D  
Sbjct: 32  IDVVAVAAGERHSLALSAKGTVFAWGDNHTGQLGLGG-----EDPLPMDVPTTSLGRDV- 85

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                + G+A G RHS +++  G + T GWGLYGQ G    +D 
Sbjct: 86  --------------------VIVGVAAGARHSVMVSATGDVFTVGWGLYGQLGHEDAEDL 125

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG-GDQAETLPRLLD 399
            +P  V  L GI +  VAAG  HT C++ DG +YA+G N+ G+LGT  GD  +       
Sbjct: 126 FAPRRVEHLAGITVVSVAAGSAHTACVTRDGALYAWGSNRKGELGTATGDVTKARESNDG 185

Query: 400 APSLENVHSKSVSCGARHTAVIAD----DGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI- 454
           A SL    + +V+CG+ HT  +A     +  +F +GWN  GQLGLGD  DR IP+++ + 
Sbjct: 186 AGSL----AVAVACGSSHTVALARLESGEAGLFGFGWNNMGQLGLGDDKDRGIPARIPLP 241

Query: 455 ---EGCVPRNVACGWWHTLL 471
              +G V + + CGWWHT++
Sbjct: 242 ANEKGKVTK-LRCGWWHTVV 260



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 91/230 (39%), Gaps = 32/230 (13%)

Query: 195 KQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG 254
             T +    G++ L       +L   V I  VAAG RH++ +S  G V+  G+G  GQLG
Sbjct: 59  NHTGQLGLGGEDPLPMDVPTTSLGRDVVIVGVAAGARHSVMVSATGDVFTVGWGLYGQLG 118

Query: 255 LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAV 314
                            E  +   R   L+              G  V  +A G  H+A 
Sbjct: 119 HED-------------AEDLFAPRRVEHLA--------------GITVVSVAAGSAHTAC 151

Query: 315 ITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI----SSD 370
           +T  GAL  +G    G+ G  +T D       +   G     VA G  HT+ +    S +
Sbjct: 152 VTRDGALYAWGSNRKGELGT-ATGDVTKARESNDGAGSLAVAVACGSSHTVALARLESGE 210

Query: 371 GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
             ++ FG N  GQLG G D+   +P  +  P+ E      + CG  HT V
Sbjct: 211 AGLFGFGWNNMGQLGLGDDKDRGIPARIPLPANEKGKVTKLRCGWWHTVV 260



 Score = 45.4 bits (106), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 100/228 (43%), Gaps = 37/228 (16%)

Query: 57  AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPT-----EASIVKAAAGWAHCV 111
           ++A+S    +  WG  +  GQ     G  GE P P  +PT     +  IV  AAG  H V
Sbjct: 44  SLALSAKGTVFAWGD-NHTGQL----GLGGEDPLPMDVPTTSLGRDVVIVGVAAGARHSV 98

Query: 112 AVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG 171
            V+  G+V+T GW        ++G L  G    +D+F  +     E ++  + VS ++G 
Sbjct: 99  MVSATGDVFTVGWG-------LYGQL--GHEDAEDLFAPRR---VEHLAGITVVSVAAGS 146

Query: 172 TSSGTDGR-GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGG 230
             +    R G+       R+  L   T + + + + N  A         G     VA G 
Sbjct: 147 AHTACVTRDGALYAWGSNRKGELGTATGDVTKARESNDGA---------GSLAVAVACGS 197

Query: 231 RHTLALSDI----GQVWGWGYGGEGQLGLG-SRIRMVSSPHPIPCIES 273
            HT+AL+ +      ++G+G+   GQLGLG  + R + +  P+P  E 
Sbjct: 198 SHTVALARLESGEAGLFGFGWNNMGQLGLGDDKDRGIPARIPLPANEK 245


>gi|326511771|dbj|BAJ92030.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 442

 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 103/297 (34%), Positives = 153/297 (51%), Gaps = 31/297 (10%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIG-QVWGWGYGGEGQLGLGSRIRMV 262
           GD      P ++T     R+ +V  G  HT+A SD   Q++ WG+G  G+LG G+    V
Sbjct: 56  GDSEDRPVPTVLTSFDVPRVTSVICGADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSD-V 114

Query: 263 SSPHPIPCIE-----------------------SSYGKDRSAALSRGSVNSEGPGFRVP- 298
            +P PI  ++                        S+G++++  L  G+        ++  
Sbjct: 115 FNPQPIVALQGMKIKQIACGDSHCLTVTFNGQVHSWGRNQNGQLGLGNNQDSLLPQKIKA 174

Query: 299 --GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG 356
             G  VK IA G  H+  IT+ G L  +GWG YG  G    DD   P  VSS+ G ++  
Sbjct: 175 FEGVCVKMIAAGAEHTTAITEGGDLYGWGWGRYGNLGLSDRDDRSVPEKVSSVEGEKMVL 234

Query: 357 VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR 416
           VA G  H++ +SS G +Y +G +++GQLG G  Q   +PR L+A  L++V    +S G R
Sbjct: 235 VACGWRHSVSVSSSGALYTYGWSKYGQLGHGDFQDHLVPRKLEA--LKDVPISQISGGWR 292

Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACGWWHTLLL 472
           HT  +A+DGK++ WGWNK+GQ+G+ D +D   P +V   +      VACGW HTL L
Sbjct: 293 HTMAVAEDGKLYGWGWNKFGQVGVEDNVDHCSPVEVNFPDEQKIVQVACGWRHTLAL 349



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 114/406 (28%), Positives = 183/406 (45%), Gaps = 60/406 (14%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEP-----FPLPTEASIVKAAAGW 107
           G   + A+   + + +WG  +D GQ  +  G   + P P     F +P   S++    G 
Sbjct: 29  GANHSAALLSGQMVCSWGRGED-GQ--LGHGDSEDRPVPTVLTSFDVPRVTSVI---CGA 82

Query: 108 AHCVAVTEGG-EVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVS 166
            H +A ++   ++Y+WGW +       FG L  G G   DVF  Q     + +  +    
Sbjct: 83  DHTIAYSDDEMQLYSWGWGD-------FGRL--GHGNSSDVFNPQPIVALQGMKIKQIAC 133

Query: 167 RSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATV 226
             S   +   +G+      ++  ++ L          G+   S  P  +    GV +  +
Sbjct: 134 GDSHCLTVTFNGQVHSWGRNQNGQLGL----------GNNQDSLLPQKIKAFEGVCVKMI 183

Query: 227 AAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRG 286
           AAG  HT A+++ G ++GWG+G  G LGL  R                   DRS      
Sbjct: 184 AAGAEHTTAITEGGDLYGWGWGRYGNLGLSDR------------------DDRSVPEKVS 225

Query: 287 SVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCV 346
           SV          G  +  +ACG RHS  ++ +GAL T+GW  YGQ G G   D L P  +
Sbjct: 226 SVE---------GEKMVLVACGWRHSVSVSSSGALYTYGWSKYGQLGHGDFQDHLVPRKL 276

Query: 347 SSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENV 406
            +L  + I  ++ G  HT+ ++ DG +Y +G N+FGQ+G   +     P  ++ P  + +
Sbjct: 277 EALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVEDNVDHCSPVEVNFPDEQKI 336

Query: 407 HSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
               V+CG RHT  + ++  +F WG    GQLG G++IDRN P  +
Sbjct: 337 --VQVACGWRHTLALTENKNIFSWGRGASGQLGHGEIIDRNTPKMI 380



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/275 (33%), Positives = 142/275 (51%), Gaps = 38/275 (13%)

Query: 198 AESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS 257
           A++ ++GDE        V   P   +  ++AG  H+ AL     V  WG G +GQLG G 
Sbjct: 5   AKAEAAGDE-------AVPEAPEQSVILISAGANHSAALLSGQMVCSWGRGEDGQLGHGD 57

Query: 258 RIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHS-AVIT 316
                S   P+P + +S                    F VP   V  + CG  H+ A   
Sbjct: 58  -----SEDRPVPTVLTS--------------------FDVP--RVTSVICGADHTIAYSD 90

Query: 317 DAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAF 376
           D   L ++GWG +G+ G G++ D  +P  + +L G++I+ +A G  H + ++ +G V+++
Sbjct: 91  DEMQLYSWGWGDFGRLGHGNSSDVFNPQPIVALQGMKIKQIACGDSHCLTVTFNGQVHSW 150

Query: 377 GGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYG 436
           G NQ GQLG G +Q   LP+ + A   E V  K ++ GA HT  I + G ++ WGW +YG
Sbjct: 151 GRNQNGQLGLGNNQDSLLPQKIKA--FEGVCVKMIAAGAEHTTAITEGGDLYGWGWGRYG 208

Query: 437 QLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTL 470
            LGL D  DR++P +V ++EG     VACGW H++
Sbjct: 209 NLGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSV 243



 Score = 45.8 bits (107), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 1/72 (1%)

Query: 52  GGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCV 111
           GG    MA+++  KL  WG  +  GQ  V        P     P E  IV+ A GW H +
Sbjct: 289 GGWRHTMAVAEDGKLYGWG-WNKFGQVGVEDNVDHCSPVEVNFPDEQKIVQVACGWRHTL 347

Query: 112 AVTEGGEVYTWG 123
           A+TE   +++WG
Sbjct: 348 ALTENKNIFSWG 359


>gi|326509355|dbj|BAJ91594.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518534|dbj|BAJ88296.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 442

 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 103/297 (34%), Positives = 153/297 (51%), Gaps = 31/297 (10%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIG-QVWGWGYGGEGQLGLGSRIRMV 262
           GD      P ++T     R+ +V  G  HT+A SD   Q++ WG+G  G+LG G+    V
Sbjct: 56  GDSEDRPVPTVLTSFDVPRVTSVICGADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSD-V 114

Query: 263 SSPHPIPCIE-----------------------SSYGKDRSAALSRGSVNSEGPGFRVP- 298
            +P PI  ++                        S+G++++  L  G+        ++  
Sbjct: 115 FNPQPIVALQGMKIKQIACGDSHCLTVTFNGQVHSWGRNQNGQLGLGNNQDSLLPQKIKA 174

Query: 299 --GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG 356
             G  VK IA G  H+  IT+ G L  +GWG YG  G    DD   P  VSS+ G ++  
Sbjct: 175 FEGVCVKMIAAGAEHTTAITEGGDLYGWGWGRYGNLGLSDRDDRSVPEKVSSVEGEKMVL 234

Query: 357 VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR 416
           VA G  H++ +SS G +Y +G +++GQLG G  Q   +PR L+A  L++V    +S G R
Sbjct: 235 VACGWRHSVSVSSSGALYTYGWSKYGQLGHGDFQDHLVPRKLEA--LKDVPISQISGGWR 292

Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACGWWHTLLL 472
           HT  +A+DGK++ WGWNK+GQ+G+ D +D   P +V   +      VACGW HTL L
Sbjct: 293 HTMAVAEDGKLYGWGWNKFGQVGVEDNVDHCSPVEVNFPDEQKIVQVACGWRHTLAL 349



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 114/406 (28%), Positives = 183/406 (45%), Gaps = 60/406 (14%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEP-----FPLPTEASIVKAAAGW 107
           G   + A+   + + +WG  +D GQ  +  G   + P P     F +P   S++    G 
Sbjct: 29  GANHSAALLSGQMVCSWGRGED-GQ--LGHGDSEDRPVPTVLTSFDVPRVTSVI---CGA 82

Query: 108 AHCVAVTEGG-EVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVS 166
            H +A ++   ++Y+WGW +       FG L  G G   DVF  Q     + +  +    
Sbjct: 83  DHTIAYSDDEMQLYSWGWGD-------FGRL--GHGNSSDVFNPQPIVALQGMKIKQIAC 133

Query: 167 RSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATV 226
             S   +   +G+      ++  ++ L          G+   S  P  +    GV +  +
Sbjct: 134 GDSHCLTVTFNGQVHSWGRNQNGQLGL----------GNNQDSLLPQKIKAFEGVCVKMI 183

Query: 227 AAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRG 286
           AAG  HT A+++ G ++GWG+G  G LGL  R                   DRS      
Sbjct: 184 AAGAEHTTAITEGGDLYGWGWGRYGNLGLSDR------------------DDRSVPEKVS 225

Query: 287 SVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCV 346
           SV          G  +  +ACG RHS  ++ +GAL T+GW  YGQ G G   D L P  +
Sbjct: 226 SVE---------GEKMVLVACGWRHSVSVSSSGALYTYGWSKYGQLGHGDFQDHLVPRKL 276

Query: 347 SSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENV 406
            +L  + I  ++ G  HT+ ++ DG +Y +G N+FGQ+G   +     P  ++ P  + +
Sbjct: 277 EALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVEDNVDHCSPVEVNFPDEQKI 336

Query: 407 HSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
               V+CG RHT  + ++  +F WG    GQLG G++IDRN P  +
Sbjct: 337 --VQVACGWRHTLALTENKNIFSWGRGASGQLGHGEIIDRNTPKMI 380



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/275 (33%), Positives = 142/275 (51%), Gaps = 38/275 (13%)

Query: 198 AESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS 257
           A++ ++GDE        V   P   +  ++AG  H+ AL     V  WG G +GQLG G 
Sbjct: 5   AKAEAAGDE-------AVPEAPEQSVILISAGANHSAALLSGQMVCSWGRGEDGQLGHGD 57

Query: 258 RIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHS-AVIT 316
                S   P+P + +S                    F VP   V  + CG  H+ A   
Sbjct: 58  -----SEDRPVPTVLTS--------------------FDVP--RVTSVICGADHTIAYSD 90

Query: 317 DAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAF 376
           D   L ++GWG +G+ G G++ D  +P  + +L G++I+ +A G  H + ++ +G V+++
Sbjct: 91  DEMQLYSWGWGDFGRLGHGNSSDVFNPQPIVALQGMKIKQIACGDSHCLTVTFNGQVHSW 150

Query: 377 GGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYG 436
           G NQ GQLG G +Q   LP+ + A   E V  K ++ GA HT  I + G ++ WGW +YG
Sbjct: 151 GRNQNGQLGLGNNQDSLLPQKIKA--FEGVCVKMIAAGAEHTTAITEGGDLYGWGWGRYG 208

Query: 437 QLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTL 470
            LGL D  DR++P +V ++EG     VACGW H++
Sbjct: 209 NLGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSV 243



 Score = 45.8 bits (107), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 1/72 (1%)

Query: 52  GGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCV 111
           GG    MA+++  KL  WG  +  GQ  V        P     P E  IV+ A GW H +
Sbjct: 289 GGWRHTMAVAEDGKLYGWG-WNKFGQVGVEDNVDHCSPVEVNFPDEQKIVQVACGWRHTL 347

Query: 112 AVTEGGEVYTWG 123
           A+TE   +++WG
Sbjct: 348 ALTENKNIFSWG 359


>gi|225438373|ref|XP_002274569.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Vitis
           vinifera]
 gi|296082603|emb|CBI21608.3| unnamed protein product [Vitis vinifera]
          Length = 445

 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 101/298 (33%), Positives = 154/298 (51%), Gaps = 33/298 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSD-IGQVWGWGYGGEGQLGLGSRIRMV 262
           GD      P  ++   G  + +V  G  HT A S+   QV+ WG+G  G+LG G+   + 
Sbjct: 51  GDAEDRLSPTYLSALDGHEVVSVTCGADHTTAYSESFTQVYSWGWGDFGRLGHGNSSDLF 110

Query: 263 SSPHPIPCIE-----------------------SSYGKDRSAALSRGSVNSEGPGFRVP- 298
           + P PI  +                         S+G++++  L  G+        ++  
Sbjct: 111 T-PQPIKALHGLRIKQIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQA 169

Query: 299 --GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG 356
             G  VK +A G  H+A +T+ G L  +GWG YG  G G  +D L P  VS++ G+++  
Sbjct: 170 FQGVSVKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVPEKVSTVEGVKMVK 229

Query: 357 VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR 416
           VA G  HTI +SS G +Y +G +++GQLG G  +    P  L+A   EN+ S+ +S G R
Sbjct: 230 VACGWRHTISVSSSGGLYTYGWSKYGQLGHGDFEDHLTPHKLEALQ-ENLISE-ISGGWR 287

Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI--EGCVPRNVACGWWHTLLL 472
           HT  +  DGK++ WGWNK+GQ+G+GD +D   P QV    E  V  +++CGW HTL +
Sbjct: 288 HTMALTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPHEQKVV-HISCGWRHTLAV 344



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 116/404 (28%), Positives = 178/404 (44%), Gaps = 52/404 (12%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
           G   ++A+     + +WG  +D GQ      +    P          +V    G  H  A
Sbjct: 24  GASHSVALLSGNVVCSWGRGED-GQLGHGDAEDRLSPTYLSALDGHEVVSVTCGADHTTA 82

Query: 113 VTEG-GEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG 171
            +E   +VY+WGW +       FG L  G G   D+F  Q       +  +      S  
Sbjct: 83  YSESFTQVYSWGWGD-------FGRL--GHGNSSDLFTPQPIKALHGLRIKQIACGDSHC 133

Query: 172 TSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGR 231
            +   DG       ++  ++ L          G    S  P  +    GV +  VAAG  
Sbjct: 134 LAVTMDGEVQSWGRNQNGQLGL----------GTTEDSLVPQKIQAFQGVSVKMVAAGAE 183

Query: 232 HTLALSDIGQVWGWGYGGEGQLGLGSRI-RMVSSPHPIPCIESSYGKDRSAALSRGSVNS 290
           HT A+++ G+++GWG+G  G LGLG R  R+V  P  +  +E                  
Sbjct: 184 HTAAVTEDGELYGWGWGRYGNLGLGDRNDRLV--PEKVSTVE------------------ 223

Query: 291 EGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLL 350
                   G  +  +ACG RH+  ++ +G L T+GW  YGQ G G  +D L+P+ + +L 
Sbjct: 224 --------GVKMVKVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDFEDHLTPHKLEALQ 275

Query: 351 GIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
              I  ++ G  HT+ ++SDG +Y +G N+FGQ+G G +     P  +  P  + V    
Sbjct: 276 ENLISEISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPHEQKV--VH 333

Query: 411 VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI 454
           +SCG RHT  + +   VF WG    GQLG G+ IDRNIP  + +
Sbjct: 334 ISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESIDRNIPKMIEV 377



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 104/227 (45%), Gaps = 56/227 (24%)

Query: 298 PGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG------ 351
           P   V  I+ G  HS  +     + ++G G  GQ G G  +D LSP  +S+L G      
Sbjct: 14  PVRRVLLISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTYLSALDGHEVVSV 73

Query: 352 -----------------------------------------------IQIEGVAAGLWHT 364
                                                          ++I+ +A G  H 
Sbjct: 74  TCGADHTTAYSESFTQVYSWGWGDFGRLGHGNSSDLFTPQPIKALHGLRIKQIACGDSHC 133

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           + ++ DG+V ++G NQ GQLG G  +   +P+ + A   + V  K V+ GA HTA + +D
Sbjct: 134 LAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQA--FQGVSVKMVAAGAEHTAAVTED 191

Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTL 470
           G+++ WGW +YG LGLGD  DR +P +V T+EG     VACGW HT+
Sbjct: 192 GELYGWGWGRYGNLGLGDRNDRLVPEKVSTVEGVKMVKVACGWRHTI 238


>gi|326518338|dbj|BAJ88198.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326519062|dbj|BAJ96530.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 441

 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 121/416 (29%), Positives = 184/416 (44%), Gaps = 58/416 (13%)

Query: 53  GCGFAMAISDSRKLITWGSTDD--LGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
           G   ++A+     L TWG  +D  LG           +   F  P   S++    G  H 
Sbjct: 22  GASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPTVISGFDAPGITSVI---CGADHT 78

Query: 111 VAVTEG-GEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSS 169
            A +E   +VY+WGW +       FG L  G G   DVF  Q     + +    ++ + +
Sbjct: 79  TAYSEDEHQVYSWGWGD-------FGRL--GHGNSTDVFTPQPVKALQGI----KIKQLA 125

Query: 170 GGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAG 229
            G S       +GE       +S  +        G    S  P  +    G+ +  +AAG
Sbjct: 126 CGDSHCLAVTMAGE------VLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGISVKMIAAG 179

Query: 230 GRHTLALSDIGQVWGWGYGGEGQLGLGSR-IRMVSSPHPIPCIESSYGKDRSAALSRGSV 288
             HT A+++ G ++GWG+G  G LGLG R  R V  P  +  +E                
Sbjct: 180 AEHTAAVTEDGDIYGWGWGRYGNLGLGDRNDRFV--PEKVSSVE---------------- 221

Query: 289 NSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS 348
                     G+ +  +ACG RH+  ++ +G+L T+GW  YGQ G G  +D L P+ V +
Sbjct: 222 ----------GDKMVLVACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHLVPHKVEA 271

Query: 349 LLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHS 408
           L       ++ G  HT+ ++SDG +Y +G N+FGQ+G G +     P  ++ P  + V  
Sbjct: 272 LKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDNADHCSPAQVNFPEEQKV-- 329

Query: 409 KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVAC 464
             V+CG RHT    +   VF WG    GQLG G+++DRN P  V I+   P    C
Sbjct: 330 AQVACGWRHTLAFTEKKNVFAWGRGTSGQLGHGEIVDRNTP--VIIDALSPDGPGC 383



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 95/262 (36%), Positives = 132/262 (50%), Gaps = 30/262 (11%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P  V    G++I  +A G  H LA++  G+V  WG    GQLGLG+    +  P  I   
Sbjct: 110 PQPVKALQGIKIKQLACGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSLL-PQTIQAF 168

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
           E                          G  VK IA G  H+A +T+ G +  +GWG YG 
Sbjct: 169 E--------------------------GISVKMIAAGAEHTAAVTEDGDIYGWGWGRYGN 202

Query: 332 CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
            G G  +D   P  VSS+ G ++  VA G  HTI +SS G +Y +G +++GQLG G  + 
Sbjct: 203 LGLGDRNDRFVPEKVSSVEGDKMVLVACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFED 262

Query: 392 ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
             +P  ++A  L++  +  +S G RHT  +  DGK++ WGWNK+GQ+G GD  D   P+Q
Sbjct: 263 HLVPHKVEA--LKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDNADHCSPAQ 320

Query: 452 VTI-EGCVPRNVACGWWHTLLL 472
           V   E      VACGW HTL  
Sbjct: 321 VNFPEEQKVAQVACGWRHTLAF 342



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 85/253 (33%), Positives = 134/253 (52%), Gaps = 31/253 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  V+AG  H++AL     +  WG G +GQLG G      +    +P + S         
Sbjct: 16  VVLVSAGASHSVALLAGNVLCTWGRGEDGQLGHGD-----AEDRLVPTVIS--------- 61

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVIT-DAGALLTFGWGLYGQCGQGSTDDEL 341
                      GF  PG  +  + CG  H+   + D   + ++GWG +G+ G G++ D  
Sbjct: 62  -----------GFDAPG--ITSVICGADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVF 108

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           +P  V +L GI+I+ +A G  H + ++  G+V ++G NQ GQLG G  +   LP+ + A 
Sbjct: 109 TPQPVKALQGIKIKQLACGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQA- 167

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPR 460
             E +  K ++ GA HTA + +DG ++ WGW +YG LGLGD  DR +P +V+ +EG    
Sbjct: 168 -FEGISVKMIAAGAEHTAAVTEDGDIYGWGWGRYGNLGLGDRNDRFVPEKVSSVEGDKMV 226

Query: 461 NVACGWWHTLLLA 473
            VACGW HT+ ++
Sbjct: 227 LVACGWRHTITVS 239


>gi|325181521|emb|CCA15971.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 6906

 Score =  150 bits (380), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 95/265 (35%), Positives = 129/265 (48%), Gaps = 35/265 (13%)

Query: 220  GVRIATVAA--GGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
            G+ I  VAA  G  H LA+S  G V+ WGY   GQLGLG+ +    +P  I  +   Y  
Sbjct: 3218 GIPITMVAASNGCEHMLAISHDGAVYSWGYNDRGQLGLGTTVSKSHTPRVIESLREKY-- 3275

Query: 278  DRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST 337
                                   ++   A    HSAV+++ G LLTFG    GQ G   T
Sbjct: 3276 -----------------------FITFAAVSYHHSAVVSNNGDLLTFGMNDSGQLGLDHT 3312

Query: 338  DDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
              + +P  V +L   ++  VA GL+HT+ I  DGDVY+FG N++GQLG    Q   +P L
Sbjct: 3313 QHQHTPQLVETLSSQKVGRVACGLYHTVAIVDDGDVYSFGKNEYGQLGLSHTQNTKVPML 3372

Query: 398  LD------APSLENVHSK-SVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
            +        P L+ V+    V CG  HT  I + GKV  WG N YGQLG+G    ++I  
Sbjct: 3373 VKIPPAPRTPMLDAVNKAVQVYCGYYHTVTILECGKVVTWGRNDYGQLGIGSKEHKSIAQ 3432

Query: 451  QVTIE-GCVPRNVACGWWHTLLLAV 474
             V +      +  +CG +HTLLL V
Sbjct: 3433 FVPLPLTSRVKRASCGCYHTLLLLV 3457



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 82/257 (31%), Positives = 124/257 (48%), Gaps = 36/257 (14%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG---LGSRIRMVSSPHPIPCIESSYGK 277
           V+    + G  H +A++D G  + WGY   GQLG   +G+++ +   P  I  I+    K
Sbjct: 436 VKYINASNGCEHLIAITDTGLAYSWGYNDRGQLGHENVGTKLYL---PKLIESIKEK--K 490

Query: 278 DRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST 337
            +SAA+S                          HSA+++ +G L TFG    GQ G   T
Sbjct: 491 MKSAAVSY------------------------HHSALVSVSGELYTFGMNDCGQLGLDHT 526

Query: 338 DDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
             + +P  V +LLG  +  V+ GL+H +  +  G+V+  G N  GQLG G ++   +P  
Sbjct: 527 QHQSTPQLVKALLGHHVSMVSCGLYHMVLCTISGEVFTCGKNDHGQLGLGHNKQVKVPTQ 586

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC 457
           +  P   N     V+CG  H   I   G  + +G N YGQLG+G  I +NIP  +TI   
Sbjct: 587 VVLP---NELVCFVACGYYHATAITSTGLTYSFGRNDYGQLGIGSKIHQNIPIALTISSN 643

Query: 458 VPR-NVACGWWHTLLLA 473
               + ACG +HTLL++
Sbjct: 644 TRMVHAACGCYHTLLMS 660



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 116/259 (44%), Gaps = 31/259 (11%)

Query: 239 IGQVWGWGYGGEGQLGLG----------------SRIRMVSSPHPIPCIESS------YG 276
            G+++  G    G+LGLG                  IR V S + I  I +S       G
Sbjct: 347 FGELYSCGQNSYGELGLGDDIERHQLTSVPLCGWDHIRQVVSGNEILAILTSDGVVLTCG 406

Query: 277 KDRSAALSRGSVNSEGPGFR----VPGNYVKGI--ACGGRHSAVITDAGALLTFGWGLYG 330
            ++S     G+ +      R    +  + VK I  + G  H   ITD G   ++G+   G
Sbjct: 407 LNKSGQCGHGNFDERVMLLRPIQALRSHRVKYINASNGCEHLIAITDTGLAYSWGYNDRG 466

Query: 331 QCGQGSTDDELS-PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD 389
           Q G  +   +L  P  + S+   +++  A    H+  +S  G++Y FG N  GQLG    
Sbjct: 467 QLGHENVGTKLYLPKLIESIKEKKMKSAAVSYHHSALVSVSGELYTFGMNDCGQLGLDHT 526

Query: 390 QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIP 449
           Q ++ P+L+ A  L   H   VSCG  H  +    G+VF  G N +GQLGLG      +P
Sbjct: 527 QHQSTPQLVKA--LLGHHVSMVSCGLYHMVLCTISGEVFTCGKNDHGQLGLGHNKQVKVP 584

Query: 450 SQVTIEGCVPRNVACGWWH 468
           +QV +   +   VACG++H
Sbjct: 585 TQVVLPNELVCFVACGYYH 603



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/177 (34%), Positives = 94/177 (53%), Gaps = 6/177 (3%)

Query: 302  VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL-SPNCVSSLLGIQIEGVAA- 359
            ++ IA G     V+   GA+ T G    GQCG G+ D+ L  P+ + +L GI I  VAA 
Sbjct: 3168 IQSIAGGNEVLVVLMKDGAVFTCGLNKSGQCGIGNFDERLIVPSPIPALSGIPITMVAAS 3227

Query: 360  -GLWHTICISSDGDVYAFGGNQFGQLGTGGDQAET-LPRLLDAPSLENVHSKSVSCGARH 417
             G  H + IS DG VY++G N  GQLG G   +++  PR++++   E       +    H
Sbjct: 3228 NGCEHMLAISHDGAVYSWGYNDRGQLGLGTTVSKSHTPRVIESLR-EKYFITFAAVSYHH 3286

Query: 418  TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLA 473
            +AV++++G +  +G N  GQLGL     ++ P  V T+       VACG +HT+ + 
Sbjct: 3287 SAVVSNNGDLLTFGMNDSGQLGLDHTQHQHTPQLVETLSSQKVGRVACGLYHTVAIV 3343



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 82/316 (25%), Positives = 127/316 (40%), Gaps = 63/316 (19%)

Query: 88   IPEPFP----LPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGL 143
            +P P P    +P   ++V A+ G  H +A++  G VY+WG+ +        G L  GT +
Sbjct: 3209 VPSPIPALSGIPI--TMVAASNGCEHMLAISHDGAVYSWGYND-------RGQLGLGTTV 3259

Query: 144  DKD----VFE--RQSSFLT-EQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQ 196
             K     V E  R+  F+T   VS       S+ G         SG+ G    +     Q
Sbjct: 3260 SKSHTPRVIESLREKYFITFAAVSYHHSAVVSNNGDLLTFGMNDSGQLGLDHTQHQHTPQ 3319

Query: 197  TAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGL- 255
              E+ SS                  ++  VA G  HT+A+ D G V+ +G    GQLGL 
Sbjct: 3320 LVETLSSQ-----------------KVGRVACGLYHTVAIVDDGDVYSFGKNEYGQLGLS 3362

Query: 256  ---GSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHS 312
                +++ M+    P P         R+  L                N    + CG  H+
Sbjct: 3363 HTQNTKVPMLVKIPPAP---------RTPMLD-------------AVNKAVQVYCGYYHT 3400

Query: 313  AVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGD 372
              I + G ++T+G   YGQ G GS + +     V   L  +++  + G +HT+ +  +G 
Sbjct: 3401 VTILECGKVVTWGRNDYGQLGIGSKEHKSIAQFVPLPLTSRVKRASCGCYHTLLLLVNGR 3460

Query: 373  VYAFGGNQFGQLGTGG 388
               FG N  GQLG   
Sbjct: 3461 PMVFGRNNKGQLGVAS 3476



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 80/332 (24%), Positives = 133/332 (40%), Gaps = 57/332 (17%)

Query: 101 VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLD-----KDVFERQSSFL 155
           + A+ G  H +A+T+ G  Y+WG+ +    G++ G  + GT L      + + E++    
Sbjct: 439 INASNGCEHLIAITDTGLAYSWGYND---RGQL-GHENVGTKLYLPKLIESIKEKKMKSA 494

Query: 156 TEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLV 215
                  + VS S    + G +  G         ++ L     +S+          P LV
Sbjct: 495 AVSYHHSALVSVSGELYTFGMNDCG---------QLGLDHTQHQST----------PQLV 535

Query: 216 TLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSY 275
               G  ++ V+ G  H +  +  G+V+  G    GQLGLG   + V  P  +       
Sbjct: 536 KALLGHHVSMVSCGLYHMVLCTISGEVFTCGKNDHGQLGLGHN-KQVKVPTQVV------ 588

Query: 276 GKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG 335
                                +P   V  +ACG  H+  IT  G   +FG   YGQ G G
Sbjct: 589 ---------------------LPNELVCFVACGYYHATAITSTGLTYSFGRNDYGQLGIG 627

Query: 336 STDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLP 395
           S   +  P  ++     ++   A G +HT+ +S  G V+ FG N  GQLG  G+    LP
Sbjct: 628 SKIHQNIPIALTISSNTRMVHAACGCYHTLLMSDSGQVFVFGRNNKGQLGNRGNTDSLLP 687

Query: 396 RLLDAPSLENVHS-KSVSCGARHTAVIADDGK 426
             L     +N+     ++ G   T++I +  +
Sbjct: 688 VPLKVRPEKNMRRCLHIAAGFYTTSLIVERKR 719



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 77/295 (26%), Positives = 107/295 (36%), Gaps = 51/295 (17%)

Query: 51  GGGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWA 108
             GC   +AI+D+    +WG  D   LG   V  G    +P+      E  +  AA  + 
Sbjct: 442 SNGCEHLIAITDTGLAYSWGYNDRGQLGHENV--GTKLYLPKLIESIKEKKMKSAAVSYH 499

Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRS 168
           H   V+  GE+YT+G  +C       G L    GLD    + QS+    +      VS  
Sbjct: 500 HSALVSVSGELYTFGMNDC-------GQL----GLDHT--QHQSTPQLVKALLGHHVSMV 546

Query: 169 SGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAA 228
           S G         SGE        +  K        G       P  V L P   +  VA 
Sbjct: 547 SCGLYHMVLCTISGE------VFTCGKNDHGQLGLGHNKQVKVPTQVVL-PNELVCFVAC 599

Query: 229 GGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSV 288
           G  H  A++  G  + +G    GQLG+GS+I       PI    SS  +   A       
Sbjct: 600 GYYHATAITSTGLTYSFGRNDYGQLGIGSKIH---QNIPIALTISSNTRMVHA------- 649

Query: 289 NSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                            ACG  H+ +++D+G +  FG    GQ G     D L P
Sbjct: 650 -----------------ACGCYHTLLMSDSGQVFVFGRNNKGQLGNRGNTDSLLP 687



 Score = 40.4 bits (93), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 3/90 (3%)

Query: 36  VRLPLTVGSAWRDVCGGGCGF--AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFP 93
           V++P  V      VC   CG+  A AI+ +    ++G  +D GQ  + S  H  IP    
Sbjct: 581 VKVPTQVVLPNELVCFVACGYYHATAITSTGLTYSFGR-NDYGQLGIGSKIHQNIPIALT 639

Query: 94  LPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
           + +   +V AA G  H + +++ G+V+ +G
Sbjct: 640 ISSNTRMVHAACGCYHTLLMSDSGQVFVFG 669



 Score = 40.4 bits (93), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 2/78 (2%)

Query: 369 SDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVF 428
           S G++Y+ G N +G+LG G D      +L   P     H + V  G    A++  DG V 
Sbjct: 346 SFGELYSCGQNSYGELGLGDDIERH--QLTSVPLCGWDHIRQVVSGNEILAILTSDGVVL 403

Query: 429 CWGWNKYGQLGLGDVIDR 446
             G NK GQ G G+  +R
Sbjct: 404 TCGLNKSGQCGHGNFDER 421



 Score = 39.7 bits (91), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 7/97 (7%)

Query: 33   PLVVRLPLTVGSAWRDVCGGG----CGF--AMAISDSRKLITWGSTDDLGQSYVTSGKHG 86
            P++V++P    +   D         CG+   + I +  K++TWG  +D GQ  + S +H 
Sbjct: 3370 PMLVKIPPAPRTPMLDAVNKAVQVYCGYYHTVTILECGKVVTWGR-NDYGQLGIGSKEHK 3428

Query: 87   EIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
             I +  PLP  + + +A+ G  H + +   G    +G
Sbjct: 3429 SIAQFVPLPLTSRVKRASCGCYHTLLLLVNGRPMVFG 3465


>gi|226495309|ref|NP_001141147.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
 gi|194702882|gb|ACF85525.1| unknown [Zea mays]
 gi|224030327|gb|ACN34239.1| unknown [Zea mays]
 gi|414587150|tpg|DAA37721.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 443

 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 95/263 (36%), Positives = 136/263 (51%), Gaps = 30/263 (11%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P  V    G++I  +A G  H LA++  G+V  WG    GQLGLG+    +  P  I   
Sbjct: 109 PQPVKALQGLKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLL-PQKIQAF 167

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
           ES                            VK IA G  H+A +T+ G L  +GWG YG 
Sbjct: 168 ESVC--------------------------VKMIAAGAEHTAAVTEDGDLYGWGWGRYGN 201

Query: 332 CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
            G G  +D L P  VSS+ G ++  VA G  HTI +S  G++Y +G +++GQLG G  + 
Sbjct: 202 LGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFED 261

Query: 392 ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
             +P  ++A  L++     +S G RHT  +  +GK++ WGWNK+GQ+G+G+  D + P Q
Sbjct: 262 HLVPHKVEA--LKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHSSPGQ 319

Query: 452 VTI-EGCVPRNVACGWWHTLLLA 473
           V+  E      VACGW HTL L+
Sbjct: 320 VSFPEDQKISQVACGWRHTLALS 342



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 122/415 (29%), Positives = 187/415 (45%), Gaps = 56/415 (13%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
           G   ++A+     L +WG  +D GQ      +   +P         +I     G  H  A
Sbjct: 21  GASHSVALLTGNVLCSWGRGED-GQLGHGDAEDRLVPTVLSGFDAPAITSVICGADHTTA 79

Query: 113 VTEGG-EVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG 171
            +E   +VY+WGW +       FG L  G G   DVF  Q     + +    ++ + + G
Sbjct: 80  YSEDELQVYSWGWGD-------FGRL--GHGNSSDVFTPQPVKALQGL----KIKQIACG 126

Query: 172 TSSGTDGRGSGEEGS--KRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAG 229
            S       +GE  S  + +   L   T E S          P  +     V +  +AAG
Sbjct: 127 DSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDS--------LLPQKIQAFESVCVKMIAAG 178

Query: 230 GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVN 289
             HT A+++ G ++GWG+G  G LGLG                     DR+  L    V+
Sbjct: 179 AEHTAAVTEDGDLYGWGWGRYGNLGLG---------------------DRNDRLLPEKVS 217

Query: 290 SEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSL 349
           S      V G  +  +ACG RH+  ++D+G L T+GW  YGQ G G  +D L P+ V +L
Sbjct: 218 S------VEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPHKVEAL 271

Query: 350 LGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSK 409
               I  ++ G  HT+ ++S+G +Y +G N+FGQ+G G +   + P  +  P  + +   
Sbjct: 272 KDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHSSPGQVSFPEDQKI--S 329

Query: 410 SVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVAC 464
            V+CG RHT  +++   VF WG    GQLG G+++DRN P  V I+       AC
Sbjct: 330 QVACGWRHTLALSEKKNVFSWGRGTSGQLGNGEIVDRNTP--VLIDALSSDGSAC 382



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 85/258 (32%), Positives = 136/258 (52%), Gaps = 31/258 (12%)

Query: 218 NPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
           +P   +  V+AG  H++AL     +  WG G +GQLG G      +    +P + S    
Sbjct: 10  SPPQTVVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGD-----AEDRLVPTVLS---- 60

Query: 278 DRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVIT-DAGALLTFGWGLYGQCGQGS 336
                           GF  P   +  + CG  H+   + D   + ++GWG +G+ G G+
Sbjct: 61  ----------------GFDAPA--ITSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGN 102

Query: 337 TDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPR 396
           + D  +P  V +L G++I+ +A G  H + ++  G+V ++G NQ GQLG G  +   LP+
Sbjct: 103 SSDVFTPQPVKALQGLKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQ 162

Query: 397 LLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIE 455
            + A   E+V  K ++ GA HTA + +DG ++ WGW +YG LGLGD  DR +P +V ++E
Sbjct: 163 KIQA--FESVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVE 220

Query: 456 GCVPRNVACGWWHTLLLA 473
           G     VACGW HT+ ++
Sbjct: 221 GEKMVLVACGWRHTITVS 238


>gi|147782117|emb|CAN67581.1| hypothetical protein VITISV_010346 [Vitis vinifera]
          Length = 423

 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 96/255 (37%), Positives = 136/255 (53%), Gaps = 32/255 (12%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G+RI  +A G  H LA++  G+V  WG    GQLGLG+              E S    +
Sbjct: 108 GLRIKQIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGT-------------TEDSLVPQK 154

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDD 339
             A                G  VK +A G  H+A +T+ G L  +GWG YG  G G  +D
Sbjct: 155 IQAFQ--------------GVSVKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRND 200

Query: 340 ELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLD 399
            L P  VS++ G+++  VA G  HTI +SS G +Y +G +++GQLG G  +    P  L+
Sbjct: 201 RLVPEKVSTVEGVKMVKVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDFEDHLTPHKLE 260

Query: 400 APSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI--EGC 457
           A   EN+ S+ +S G RHT  +  DGK++ WGWNK+GQ+G+GD +D   P QV    E  
Sbjct: 261 ALQ-ENLISE-ISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPHEQK 318

Query: 458 VPRNVACGWWHTLLL 472
           V  +++CGW HTL +
Sbjct: 319 VV-HISCGWRHTLAV 332



 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 85/247 (34%), Positives = 127/247 (51%), Gaps = 31/247 (12%)

Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI-RMVSSPHP 267
           S  P  +    GV +  VAAG  HT A+++ G+++GWG+G  G LGLG R  R+V  P  
Sbjct: 149 SLVPQKIQAFQGVSVKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLV--PEK 206

Query: 268 IPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWG 327
           +  +E                          G  +  +ACG RH+  ++ +G L T+GW 
Sbjct: 207 VSTVE--------------------------GVKMVKVACGWRHTISVSSSGGLYTYGWS 240

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG 387
            YGQ G G  +D L+P+ + +L    I  ++ G  HT+ ++SDG +Y +G N+FGQ+G G
Sbjct: 241 KYGQLGHGDFEDHLTPHKLEALQENLISEISGGWRHTMALTSDGKLYGWGWNKFGQVGVG 300

Query: 388 GDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
            +     P  +  P  + V    +SCG RHT  + +   VF WG    GQLG G+ IDRN
Sbjct: 301 DNVDHCSPVQVKFPHEQKV--VHISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESIDRN 358

Query: 448 IPSQVTI 454
           IP  + +
Sbjct: 359 IPKMIEV 365



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 70/215 (32%), Positives = 104/215 (48%), Gaps = 44/215 (20%)

Query: 298 PGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVS---------- 347
           P   V  I+ G  HS  +     + ++G G  GQ G G  +D LSP  +S          
Sbjct: 14  PVRRVLLISAGASHSVALLXGNVVCSWGRGEDGQLGHGDAEDRLSPTYLSALDGHEVVSV 73

Query: 348 -------------------------------SLLGIQIEGVAAGLWHTICISSDGDVYAF 376
                                          +L G++I+ +A G  H + ++ DG+V ++
Sbjct: 74  TCGADHTTAYSESFTQVYSWGCDLFTPQPIKALHGLRIKQIACGDSHCLAVTMDGEVQSW 133

Query: 377 GGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYG 436
           G NQ GQLG G  +   +P+ + A   + V  K V+ GA HTA + +DG+++ WGW +YG
Sbjct: 134 GRNQNGQLGLGTTEDSLVPQKIQA--FQGVSVKMVAAGAEHTAAVTEDGELYGWGWGRYG 191

Query: 437 QLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTL 470
            LGLGD  DR +P +V T+EG     VACGW HT+
Sbjct: 192 NLGLGDRNDRLVPEKVSTVEGVKMVKVACGWRHTI 226



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 81/316 (25%), Positives = 135/316 (42%), Gaps = 46/316 (14%)

Query: 89  PEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVF 148
           P+P        I + A G +HC+AVT  GEV +WG  +        G L  GT  D  V 
Sbjct: 100 PQPIKALHGLRIKQIACGDSHCLAVTMDGEVQSWGRNQN-------GQLGLGTTEDSLVP 152

Query: 149 ERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENL 208
           ++  +F  + VS +   + +    +   DG   G    +   + L          GD N 
Sbjct: 153 QKIQAF--QGVSVKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGL----------GDRND 200

Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
              P  V+   GV++  VA G RHT+++S  G ++ +G+   GQLG G     + +PH +
Sbjct: 201 RLVPEKVSTVEGVKMVKVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDFEDHL-TPHKL 259

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL 328
             ++                           N +  I+ G RH+  +T  G L  +GW  
Sbjct: 260 EALQE--------------------------NLISEISGGWRHTMALTSDGKLYGWGWNK 293

Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGG 388
           +GQ G G   D  SP  V      ++  ++ G  HT+ ++   +V+++G    GQLG G 
Sbjct: 294 FGQVGVGDNVDHCSPVQVKFPHEQKVVHISCGWRHTLAVTERQNVFSWGRGTNGQLGHGE 353

Query: 389 DQAETLPRLLDAPSLE 404
                +P++++  S +
Sbjct: 354 SIDRNIPKMIEVLSAD 369



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 122/307 (39%), Gaps = 67/307 (21%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
           G    +A++   ++ +WG   + GQ  + + +   +P+        S+   AAG  H  A
Sbjct: 117 GDSHCLAVTMDGEVQSWGRNQN-GQLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAA 175

Query: 113 VTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSP-----RSQVSR 167
           VTE GE+Y WGW      GR +G+L  G   D+ V E+ S+    ++       R  +S 
Sbjct: 176 VTEDGELYGWGW------GR-YGNLGLGDRNDRLVPEKVSTVEGVKMVKVACGWRHTISV 228

Query: 168 SSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVA 227
           SS G          G+ G       L     E+     ENL              I+ ++
Sbjct: 229 SSSGGLYTYGWSKYGQLGHGDFEDHLTPHKLEALQ---ENL--------------ISEIS 271

Query: 228 AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR-----MVSSPHPIPCIESSYGKDRSAA 282
            G RHT+AL+  G+++GWG+   GQ+G+G  +       V  PH    +           
Sbjct: 272 GGWRHTMALTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPHEQKVVH---------- 321

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                                 I+CG RH+  +T+   + ++G G  GQ G G + D   
Sbjct: 322 ----------------------ISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESIDRNI 359

Query: 343 PNCVSSL 349
           P  +  L
Sbjct: 360 PKMIEVL 366


>gi|242073146|ref|XP_002446509.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
 gi|241937692|gb|EES10837.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
          Length = 443

 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 97/263 (36%), Positives = 134/263 (50%), Gaps = 30/263 (11%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P  V    G++I  +A G  H LA++  GQV  WG    GQLGLG+    +  P  I   
Sbjct: 110 PQPVKALQGLKIKQIACGDSHCLAVTMAGQVQSWGRNQNGQLGLGTTEDSLL-PQKIQAF 168

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
           E                          G  VK IA G  H+A +T+ G L  +GWG YG 
Sbjct: 169 E--------------------------GVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGN 202

Query: 332 CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
            G G  +D L P  VSS+ G ++  VA G  HTI +S  G++Y +G +++GQLG G  + 
Sbjct: 203 LGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFED 262

Query: 392 ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
             +P  L+A  L++     +S G RHT  +  +GK++ WGWNK+GQ+G+G+  D   P Q
Sbjct: 263 HLVPHKLEA--LKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHCSPVQ 320

Query: 452 VTI-EGCVPRNVACGWWHTLLLA 473
           V   E      VACGW HTL L+
Sbjct: 321 VHFPEDQKISQVACGWRHTLALS 343



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 117/400 (29%), Positives = 181/400 (45%), Gaps = 54/400 (13%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
           G   ++A+     L +WG  +D GQ      +   +P          I     G  H  A
Sbjct: 22  GASHSVALLTGNVLCSWGRGED-GQLGHGDAEDRLVPTVLSGFDAPGITSVICGADHTTA 80

Query: 113 VTEGG-EVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG 171
            +E   +VY+WGW +       FG L  G G   DVF  Q     + +    ++ + + G
Sbjct: 81  YSEDELQVYSWGWGD-------FGRL--GHGNSSDVFTPQPVKALQGL----KIKQIACG 127

Query: 172 TSSGTDGRGSGEEGS--KRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAG 229
            S       +G+  S  + +   L   T E S          P  +    GV +  +AAG
Sbjct: 128 DSHCLAVTMAGQVQSWGRNQNGQLGLGTTEDS--------LLPQKIQAFEGVCVKMIAAG 179

Query: 230 GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVN 289
             HT A+++ G ++GWG+G  G LGLG                     DR+  L    V+
Sbjct: 180 AEHTAAVTEDGDLYGWGWGRYGNLGLG---------------------DRNDRLLPEKVS 218

Query: 290 SEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSL 349
           S      V G  +  +ACG RH+  ++D+G L T+GW  YGQ G G  +D L P+ + +L
Sbjct: 219 S------VEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPHKLEAL 272

Query: 350 LGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSK 409
               I  ++ G  HT+ ++S+G +Y +G N+FGQ+G G +     P  +  P  + +   
Sbjct: 273 KDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHCSPVQVHFPEDQKI--S 330

Query: 410 SVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIP 449
            V+CG RHT  +++   VF WG    GQLG G+++DRN P
Sbjct: 331 QVACGWRHTLALSEKKNVFSWGRGTSGQLGNGEIVDRNTP 370



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/258 (33%), Positives = 135/258 (52%), Gaps = 31/258 (12%)

Query: 218 NPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
           +P   +  V+AG  H++AL     +  WG G +GQLG G      +    +P + S    
Sbjct: 11  SPPQTVVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGD-----AEDRLVPTVLS---- 61

Query: 278 DRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGS 336
                           GF  PG  +  + CG  H +A   D   + ++GWG +G+ G G+
Sbjct: 62  ----------------GFDAPG--ITSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGN 103

Query: 337 TDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPR 396
           + D  +P  V +L G++I+ +A G  H + ++  G V ++G NQ GQLG G  +   LP+
Sbjct: 104 SSDVFTPQPVKALQGLKIKQIACGDSHCLAVTMAGQVQSWGRNQNGQLGLGTTEDSLLPQ 163

Query: 397 LLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIE 455
            + A   E V  K ++ GA HTA + +DG ++ WGW +YG LGLGD  DR +P +V ++E
Sbjct: 164 KIQA--FEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVE 221

Query: 456 GCVPRNVACGWWHTLLLA 473
           G     VACGW HT+ ++
Sbjct: 222 GEKMVLVACGWRHTITVS 239


>gi|326507328|dbj|BAJ95741.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 343

 Score =  147 bits (372), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 95/262 (36%), Positives = 132/262 (50%), Gaps = 30/262 (11%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P  V    G++I  +A G  H LA++  G+V  WG    GQLGLG+    +  P  I   
Sbjct: 110 PQPVKALQGIKIKQLACGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSLL-PQTIQAF 168

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
           E                          G  VK IA G  H+A +T+ G +  +GWG YG 
Sbjct: 169 E--------------------------GISVKMIAAGAEHTAAVTEDGDIYGWGWGRYGN 202

Query: 332 CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
            G G  +D   P  VSS+ G ++  VA G  HTI +SS G +Y +G +++GQLG G  + 
Sbjct: 203 LGLGDRNDRFVPEKVSSVEGDKMVLVACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFED 262

Query: 392 ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
             +P  ++A  L++  +  +S G RHT  +  DGK++ WGWNK+GQ+G GD  D   P+Q
Sbjct: 263 HLVPHKVEA--LKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDNADHCSPAQ 320

Query: 452 VTI-EGCVPRNVACGWWHTLLL 472
           V   E      VACGW HTL  
Sbjct: 321 VNFPEEQKVAQVACGWRHTLAF 342



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 85/253 (33%), Positives = 134/253 (52%), Gaps = 31/253 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  V+AG  H++AL     +  WG G +GQLG G      +    +P + S         
Sbjct: 16  VVLVSAGASHSVALLAGNVLCTWGRGEDGQLGHGD-----AEDRLVPTVIS--------- 61

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVIT-DAGALLTFGWGLYGQCGQGSTDDEL 341
                      GF  PG  +  + CG  H+   + D   + ++GWG +G+ G G++ D  
Sbjct: 62  -----------GFDAPG--ITSVICGADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVF 108

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           +P  V +L GI+I+ +A G  H + ++  G+V ++G NQ GQLG G  +   LP+ + A 
Sbjct: 109 TPQPVKALQGIKIKQLACGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQA- 167

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
             E +  K ++ GA HTA + +DG ++ WGW +YG LGLGD  DR +P +V ++EG    
Sbjct: 168 -FEGISVKMIAAGAEHTAAVTEDGDIYGWGWGRYGNLGLGDRNDRFVPEKVSSVEGDKMV 226

Query: 461 NVACGWWHTLLLA 473
            VACGW HT+ ++
Sbjct: 227 LVACGWRHTITVS 239



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 104/370 (28%), Positives = 162/370 (43%), Gaps = 56/370 (15%)

Query: 53  GCGFAMAISDSRKLITWGSTDD--LGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
           G   ++A+     L TWG  +D  LG           +   F  P   S++  A    H 
Sbjct: 22  GASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPTVISGFDAPGITSVICGAD---HT 78

Query: 111 VAVTEG-GEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSS 169
            A +E   +VY+WGW +       FG L  G G   DVF  Q     + +    ++ + +
Sbjct: 79  TAYSEDEHQVYSWGWGD-------FGRL--GHGNSTDVFTPQPVKALQGI----KIKQLA 125

Query: 170 GGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAG 229
            G S       +GE       +S  +        G    S  P  +    G+ +  +AAG
Sbjct: 126 CGDSHCLAVTMAGE------VLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGISVKMIAAG 179

Query: 230 GRHTLALSDIGQVWGWGYGGEGQLGLGSR-IRMVSSPHPIPCIESSYGKDRSAALSRGSV 288
             HT A+++ G ++GWG+G  G LGLG R  R V  P  +  +E                
Sbjct: 180 AEHTAAVTEDGDIYGWGWGRYGNLGLGDRNDRFV--PEKVSSVE---------------- 221

Query: 289 NSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS 348
                     G+ +  +ACG RH+  ++ +G+L T+GW  YGQ G G  +D L P+ V +
Sbjct: 222 ----------GDKMVLVACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHLVPHKVEA 271

Query: 349 LLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHS 408
           L       ++ G  HT+ ++SDG +Y +G N+FGQ+G G +     P  ++ P  + V  
Sbjct: 272 LKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDNADHCSPAQVNFPEEQKV-- 329

Query: 409 KSVSCGARHT 418
             V+CG RHT
Sbjct: 330 AQVACGWRHT 339


>gi|384249755|gb|EIE23236.1| UVB-resistance 8 [Coccomyxa subellipsoidea C-169]
          Length = 434

 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 93/270 (34%), Positives = 133/270 (49%), Gaps = 30/270 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
           GD N    P  +    G  I  VA G  HTLA++D G+++ +G    GQLGLG+    + 
Sbjct: 102 GDCNDVFIPQPIRALAGRNIVKVACGDTHTLAVTDTGELFSFGRNQNGQLGLGTTSDAIL 161

Query: 264 SPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLT 323
            P P+  +                           G  V  IACGG HS   T AG +  
Sbjct: 162 -PQPVESLR--------------------------GQEVTSIACGGEHSLAATSAGDVFA 194

Query: 324 FGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQ 383
           +GWG YG  G G  +D   P+ V  L G+++  VA G  H+I     G VY FG +++GQ
Sbjct: 195 WGWGRYGNLGVGPPEDRHLPSQVHGLEGVKVTSVACGWRHSIAADETGAVYTFGWSKYGQ 254

Query: 384 LGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDV 443
           LG G    + +P+ ++  SL++     ++ G RHT+   D GK++ WGWNK+GQLG+G  
Sbjct: 255 LGHGDCIDQLVPKAVE--SLKDSRIVLIAGGWRHTSAADDSGKLYSWGWNKFGQLGIGSN 312

Query: 444 IDRNIPSQVTIEGCVP-RNVACGWWHTLLL 472
            D N P  V      P + ++CGW HT  +
Sbjct: 313 TDSNAPVPVQGLNTSPVKLLSCGWRHTFAV 342



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 95/276 (34%), Positives = 136/276 (49%), Gaps = 29/276 (10%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLG-----SRIRMVSSPHPIPCIESSY 275
           +R+ +V+ G  H+LAL   G    WG G +GQLG G      + R +       C     
Sbjct: 14  LRVTSVSCGSSHSLALLSNGIALSWGRGEDGQLGHGDAEERKKPRAIFHLMQASCSAVCS 73

Query: 276 GKDRSAALS--RGSVNSEG-------------------PGFRVPGNYVKGIACGGRHSAV 314
           G + S ALS  R  V S G                   P   + G  +  +ACG  H+  
Sbjct: 74  GAEYSVALSQPRNEVYSWGWGDFGRLGHGDCNDVFIPQPIRALAGRNIVKVACGDTHTLA 133

Query: 315 ITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVY 374
           +TD G L +FG    GQ G G+T D + P  V SL G ++  +A G  H++  +S GDV+
Sbjct: 134 VTDTGELFSFGRNQNGQLGLGTTSDAILPQPVESLRGQEVTSIACGGEHSLAATSAGDVF 193

Query: 375 AFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNK 434
           A+G  ++G LG G  +   LP  +    LE V   SV+CG RH+    + G V+ +GW+K
Sbjct: 194 AWGWGRYGNLGVGPPEDRHLPSQVHG--LEGVKVTSVACGWRHSIAADETGAVYTFGWSK 251

Query: 435 YGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
           YGQLG GD ID+ +P  V +++      +A GW HT
Sbjct: 252 YGQLGHGDCIDQLVPKAVESLKDSRIVLIAGGWRHT 287



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 121/403 (30%), Positives = 176/403 (43%), Gaps = 54/403 (13%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
           G   ++A+  +   ++WG  +D GQ      +  + P       +AS     +G  + VA
Sbjct: 22  GSSHSLALLSNGIALSWGRGED-GQLGHGDAEERKKPRAIFHLMQASCSAVCSGAEYSVA 80

Query: 113 VTE-GGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG 171
           +++   EVY+WGW +       FG L  G G   DVF  Q       ++ R+ V  + G 
Sbjct: 81  LSQPRNEVYSWGWGD-------FGRL--GHGDCNDVFIPQP---IRALAGRNIVKVACGD 128

Query: 172 TSS--GTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAG 229
           T +   TD   +GE        S  +        G  + +  P  V    G  + ++A G
Sbjct: 129 THTLAVTD---TGE------LFSFGRNQNGQLGLGTTSDAILPQPVESLRGQEVTSIACG 179

Query: 230 GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVN 289
           G H+LA +  G V+ WG+G  G LG+G                    +DR        + 
Sbjct: 180 GEHSLAATSAGDVFAWGWGRYGNLGVGPP------------------EDRH-------LP 214

Query: 290 SEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSL 349
           S+  G    G  V  +ACG RHS    + GA+ TFGW  YGQ G G   D+L P  V SL
Sbjct: 215 SQVHGLE--GVKVTSVACGWRHSIAADETGAVYTFGWSKYGQLGHGDCIDQLVPKAVESL 272

Query: 350 LGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSK 409
              +I  +A G  HT      G +Y++G N+FGQLG G +     P  +    L     K
Sbjct: 273 KDSRIVLIAGGWRHTSAADDSGKLYSWGWNKFGQLGIGSNTDSNAP--VPVQGLNTSPVK 330

Query: 410 SVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
            +SCG RHT  + + G VF WG    GQLG  +  D N P ++
Sbjct: 331 LLSCGWRHTFAVTEAGDVFSWGRGVNGQLGHNEPKDTNAPVRL 373



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 97/223 (43%), Gaps = 56/223 (25%)

Query: 302 VKGIACGGRHSAVITDAGALL--------------------------------------- 322
           V  ++CG  HS  +   G  L                                       
Sbjct: 16  VTSVSCGSSHSLALLSNGIALSWGRGEDGQLGHGDAEERKKPRAIFHLMQASCSAVCSGA 75

Query: 323 --------------TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICIS 368
                         ++GWG +G+ G G  +D   P  + +L G  I  VA G  HT+ ++
Sbjct: 76  EYSVALSQPRNEVYSWGWGDFGRLGHGDCNDVFIPQPIRALAGRNIVKVACGDTHTLAVT 135

Query: 369 SDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVF 428
             G++++FG NQ GQLG G      LP+ ++  SL      S++CG  H+      G VF
Sbjct: 136 DTGELFSFGRNQNGQLGLGTTSDAILPQPVE--SLRGQEVTSIACGGEHSLAATSAGDVF 193

Query: 429 CWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
            WGW +YG LG+G   DR++PSQV  +EG    +VACGW H++
Sbjct: 194 AWGWGRYGNLGVGPPEDRHLPSQVHGLEGVKVTSVACGWRHSI 236



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 99/377 (26%), Positives = 155/377 (41%), Gaps = 67/377 (17%)

Query: 49  VCGGGCGFAMAISDSRKLIT---WGSTDDLGQSYVTSGKHGE-----IPEPFPLPTEASI 100
           VC G   +++A+S  R  +    WG    LG        HG+     IP+P       +I
Sbjct: 71  VCSG-AEYSVALSQPRNEVYSWGWGDFGRLG--------HGDCNDVFIPQPIRALAGRNI 121

Query: 101 VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
           VK A G  H +AVT+ GE++++G  +        G L  GT  D  + +   S   ++V+
Sbjct: 122 VKVACGDTHTLAVTDTGELFSFGRNQN-------GQLGLGTTSDAILPQPVESLRGQEVT 174

Query: 161 PRSQVSRSSGGTSSGTD--GRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLN 218
             +     S   +S  D    G G  G+                 G       P  V   
Sbjct: 175 SIACGGEHSLAATSAGDVFAWGWGRYGNL--------------GVGPPEDRHLPSQVHGL 220

Query: 219 PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
            GV++ +VA G RH++A  + G V+ +G+   GQLG G  I  +     +P    S  KD
Sbjct: 221 EGVKVTSVACGWRHSIAADETGAVYTFGWSKYGQLGHGDCIDQL-----VPKAVESL-KD 274

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
               L                     IA G RH++   D+G L ++GW  +GQ G GS  
Sbjct: 275 SRIVL---------------------IAGGWRHTSAADDSGKLYSWGWNKFGQLGIGSNT 313

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D  +P  V  L    ++ ++ G  HT  ++  GDV+++G    GQLG    +    P  L
Sbjct: 314 DSNAPVPVQGLNTSPVKLLSCGWRHTFAVTEAGDVFSWGRGVNGQLGHNEPKDTNAPVRL 373

Query: 399 DAPSLENVHSKSVSCGA 415
              S+ ++  + +   A
Sbjct: 374 AELSMGSIKLEDLGVSA 390



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 78/307 (25%), Positives = 127/307 (41%), Gaps = 49/307 (15%)

Query: 45  AWRDVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVK 102
           A R++    CG    +A++D+ +L ++G   + GQ  + +     +P+P        +  
Sbjct: 117 AGRNIVKVACGDTHTLAVTDTGELFSFGRNQN-GQLGLGTTSDAILPQPVESLRGQEVTS 175

Query: 103 AAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPR 162
            A G  H +A T  G+V+ WGW      GR +G+L  G   D+         L  QV   
Sbjct: 176 IACGGEHSLAATSAGDVFAWGW------GR-YGNLGVGPPEDR--------HLPSQVHGL 220

Query: 163 SQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVR 222
             V  +S   + G     + +E         +K        GD      P  V      R
Sbjct: 221 EGVKVTS--VACGWRHSIAADETGAVYTFGWSKYG--QLGHGDCIDQLVPKAVESLKDSR 276

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  +A G RHT A  D G+++ WG+   GQLG+GS     ++P P+  + +S        
Sbjct: 277 IVLIAGGWRHTSAADDSGKLYSWGWNKFGQLGIGSNTDS-NAPVPVQGLNTS-------- 327

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                              VK ++CG RH+  +T+AG + ++G G+ GQ G     D  +
Sbjct: 328 ------------------PVKLLSCGWRHTFAVTEAGDVFSWGRGVNGQLGHNEPKDTNA 369

Query: 343 PNCVSSL 349
           P  ++ L
Sbjct: 370 PVRLAEL 376



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 347 SSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENV 406
           S++  +++  V+ G  H++ + S+G   ++G  + GQLG G  +    PR +    L   
Sbjct: 9   SAVSDLRVTSVSCGSSHSLALLSNGIALSWGRGEDGQLGHGDAEERKKPRAIF--HLMQA 66

Query: 407 HSKSVSCGARHTAVIAD-DGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVAC 464
              +V  GA ++  ++    +V+ WGW  +G+LG GD  D  IP  +  + G     VAC
Sbjct: 67  SCSAVCSGAEYSVALSQPRNEVYSWGWGDFGRLGHGDCNDVFIPQPIRALAGRNIVKVAC 126

Query: 465 GWWHTLLL 472
           G  HTL +
Sbjct: 127 GDTHTLAV 134



 Score = 39.7 bits (91), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 60/149 (40%), Gaps = 17/149 (11%)

Query: 88  IPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDV 147
           +P+      ++ IV  A GW H  A  + G++Y+WGW +       FG L  G+  D + 
Sbjct: 265 VPKAVESLKDSRIVLIAGGWRHTSAADDSGKLYSWGWNK-------FGQLGIGSNTDSNA 317

Query: 148 FERQSSFLTEQVSPRSQVSRSSGGTSSGTD----GRG-SGEEGSKRRR-----ISLAKQT 197
                   T  V   S   R +   +   D    GRG +G+ G    +     + LA+ +
Sbjct: 318 PVPVQGLNTSPVKLLSCGWRHTFAVTEAGDVFSWGRGVNGQLGHNEPKDTNAPVRLAELS 377

Query: 198 AESSSSGDENLSAFPCLVTLNPGVRIATV 226
             S    D  +SA P    + P  R A V
Sbjct: 378 MGSIKLEDLGVSASPLTTYVPPADRYAVV 406


>gi|357163608|ref|XP_003579788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Brachypodium distachyon]
          Length = 449

 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/296 (33%), Positives = 150/296 (50%), Gaps = 33/296 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDI-GQVWGWGYGGEGQLGLGSRIRMV 262
           GD      P +++     RI +V  G  HT A S+   QV+ WG+G  G+LG G+    V
Sbjct: 56  GDAEDRLVPTVISGFDAPRITSVICGADHTTAYSEEEQQVYSWGWGDFGRLGHGNSSD-V 114

Query: 263 SSPHPIPCIE-----------------------SSYGKDRSAALSRGSVNSEGPGFRV-- 297
            +P P+  ++                        S+G++++  L  G+        ++  
Sbjct: 115 FTPQPVRALQGIKIKQMACGDSHCLAVTMGGEVQSWGRNQNGQLGLGTTEDSLLPQKIQA 174

Query: 298 -PGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG 356
             G  VK IA G  H+A +T+ G L  +GWG YG  G G  +D   P  VS + G ++  
Sbjct: 175 FEGICVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRFVPEKVSLVEGEKMVL 234

Query: 357 VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR 416
           +A G  HTI +SS G +Y +G +++GQLG G  +    P  ++A  L++  +  +S G R
Sbjct: 235 IACGWRHTITVSSSGILYTYGWSKYGQLGHGDFEDHLFPHKVEA--LKDSSTSQISGGWR 292

Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI--EGCVPRNVACGWWHTL 470
           HT  +  DGK++ WGWNK+GQ+G GD +D   P QV    E  V + VACGW HTL
Sbjct: 293 HTMALTSDGKLYGWGWNKFGQVGAGDSVDHCSPVQVMFPAEQKVAQ-VACGWRHTL 347



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 119/406 (29%), Positives = 179/406 (44%), Gaps = 60/406 (14%)

Query: 53  GCGFAMAISDSRKLITWGSTDD--LGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
           G   ++A+ +   L +WG  +D  LG           +   F  P   S++    G  H 
Sbjct: 29  GASHSVALLEGNVLCSWGRGEDGQLGHGDAEDRLVPTVISGFDAPRITSVI---CGADHT 85

Query: 111 VAVTEG-GEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSS 169
            A +E   +VY+WGW +       FG L  G G   DVF  Q     + +    ++ + +
Sbjct: 86  TAYSEEEQQVYSWGWGD-------FGRL--GHGNSSDVFTPQPVRALQGI----KIKQMA 132

Query: 170 GGTSSGTDGRGSGEEGS--KRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVA 227
            G S        GE  S  + +   L   T E S          P  +    G+ +  +A
Sbjct: 133 CGDSHCLAVTMGGEVQSWGRNQNGQLGLGTTEDS--------LLPQKIQAFEGICVKMIA 184

Query: 228 AGGRHTLALSDIGQVWGWGYGGEGQLGLGSR-IRMVSSPHPIPCIESSYGKDRSAALSRG 286
           AG  HT A+++ G ++GWG+G  G LGLG R  R V  P  +  +E              
Sbjct: 185 AGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRFV--PEKVSLVE-------------- 228

Query: 287 SVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCV 346
                       G  +  IACG RH+  ++ +G L T+GW  YGQ G G  +D L P+ V
Sbjct: 229 ------------GEKMVLIACGWRHTITVSSSGILYTYGWSKYGQLGHGDFEDHLFPHKV 276

Query: 347 SSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENV 406
            +L       ++ G  HT+ ++SDG +Y +G N+FGQ+G G       P  +  P+ + V
Sbjct: 277 EALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDSVDHCSPVQVMFPAEQKV 336

Query: 407 HSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
               V+CG RHT    +   VF WG    GQLG G+++DRN P  +
Sbjct: 337 --AQVACGWRHTLAYTEKKNVFAWGRGTSGQLGHGEIVDRNKPLMI 380



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/253 (32%), Positives = 134/253 (52%), Gaps = 31/253 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  V+AG  H++AL +   +  WG G +GQLG G      +    +P + S         
Sbjct: 23  VVLVSAGASHSVALLEGNVLCSWGRGEDGQLGHGD-----AEDRLVPTVIS--------- 68

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDA-GALLTFGWGLYGQCGQGSTDDEL 341
                      GF  P   +  + CG  H+   ++    + ++GWG +G+ G G++ D  
Sbjct: 69  -----------GFDAP--RITSVICGADHTTAYSEEEQQVYSWGWGDFGRLGHGNSSDVF 115

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           +P  V +L GI+I+ +A G  H + ++  G+V ++G NQ GQLG G  +   LP+ + A 
Sbjct: 116 TPQPVRALQGIKIKQMACGDSHCLAVTMGGEVQSWGRNQNGQLGLGTTEDSLLPQKIQA- 174

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPR 460
             E +  K ++ GA HTA + +DG ++ WGW +YG LGLGD  DR +P +V+ +EG    
Sbjct: 175 -FEGICVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRFVPEKVSLVEGEKMV 233

Query: 461 NVACGWWHTLLLA 473
            +ACGW HT+ ++
Sbjct: 234 LIACGWRHTITVS 246



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 88/323 (27%), Positives = 136/323 (42%), Gaps = 46/323 (14%)

Query: 89  PEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVF 148
           P+P        I + A G +HC+AVT GGEV +WG  +        G L  GT  D  + 
Sbjct: 117 PQPVRALQGIKIKQMACGDSHCLAVTMGGEVQSWGRNQN-------GQLGLGTTEDSLLP 169

Query: 149 ERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENL 208
           ++  +F  E +  +   + +    +   DG   G    +   + L          GD N 
Sbjct: 170 QKIQAF--EGICVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGL----------GDRND 217

Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
              P  V+L  G ++  +A G RHT+ +S  G ++ +G+   GQLG G     +  PH +
Sbjct: 218 RFVPEKVSLVEGEKMVLIACGWRHTITVSSSGILYTYGWSKYGQLGHGDFEDHLF-PHKV 276

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL 328
             +     KD S +                      I+ G RH+  +T  G L  +GW  
Sbjct: 277 EAL-----KDSSTSQ---------------------ISGGWRHTMALTSDGKLYGWGWNK 310

Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGG 388
           +GQ G G + D  SP  V      ++  VA G  HT+  +   +V+A+G    GQLG G 
Sbjct: 311 FGQVGAGDSVDHCSPVQVMFPAEQKVAQVACGWRHTLAYTEKKNVFAWGRGTSGQLGHGE 370

Query: 389 DQAETLPRLLDAPSLENVHSKSV 411
                 P ++DA S +   SK +
Sbjct: 371 IVDRNKPLMIDAISPDGSGSKKL 393


>gi|348688463|gb|EGZ28277.1| hypothetical protein PHYSODRAFT_309181 [Phytophthora sojae]
          Length = 4167

 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 95/258 (36%), Positives = 126/258 (48%), Gaps = 31/258 (12%)

Query: 220 GVRIATVAA--GGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
           G+ I  VAA  G  H LA++  G V+ WGY   GQLGLGS I    +P  I  +   Y  
Sbjct: 554 GIVINMVAAANGCEHMLAVASDGAVYSWGYNDRGQLGLGSTISKSHTPRMIDSLREKY-- 611

Query: 278 DRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST 337
                                  ++   A    HSAV++  G LL FG    GQ G   T
Sbjct: 612 -----------------------HITTAAVSYHHSAVVSSNGELLMFGMNDCGQLGLDHT 648

Query: 338 DDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
             + +P  V SL    I  VA GL+HTI I+S G+VY+FG N +GQLG G  +   +P L
Sbjct: 649 QHQHTPQLVDSLSSQVITEVACGLYHTIAITSGGEVYSFGKNDYGQLGLGHARNMKVPTL 708

Query: 398 LDAPSLENVHSK--SVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
           +   SL     K  +VSCG  HT  I++ GK+  WG N YGQLG+G    +N    V + 
Sbjct: 709 VKT-SLGESDEKIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGIGSKDHKNSAQYVPLP 767

Query: 456 -GCVPRNVACGWWHTLLL 472
                +  +CG +HTL+L
Sbjct: 768 LSSKIKTASCGCYHTLIL 785



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 77/235 (32%), Positives = 117/235 (49%), Gaps = 11/235 (4%)

Query: 246 GYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVP---GNYV 302
           G    GQ G   R+  V+S     C   S G++    L  G  NS      VP      +
Sbjct: 447 GAAVSGQAGRTERLLSVASFDD--CELFSCGQNNYGELCLGHCNSTSKLEHVPFFSAKAI 504

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE-LSPNCVSSLLGIQIEGVAA-- 359
           + IA G    AV+   GA+ T G    GQCG G+ ++  +    V +L GI I  VAA  
Sbjct: 505 RDIAGGNEVLAVVMKDGAVFTCGLNKSGQCGNGTFEERVIIATPVRALSGIVINMVAAAN 564

Query: 360 GLWHTICISSDGDVYAFGGNQFGQLGTGGDQAET-LPRLLDAPSLENVHSKSVSCGARHT 418
           G  H + ++SDG VY++G N  GQLG G   +++  PR++D+   E  H  + +    H+
Sbjct: 565 GCEHMLAVASDGAVYSWGYNDRGQLGLGSTISKSHTPRMIDSLR-EKYHITTAAVSYHHS 623

Query: 419 AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLL 472
           AV++ +G++  +G N  GQLGL     ++ P  V ++   V   VACG +HT+ +
Sbjct: 624 AVVSSNGELLMFGMNDCGQLGLDHTQHQHTPQLVDSLSSQVITEVACGLYHTIAI 678



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 98/374 (26%), Positives = 146/374 (39%), Gaps = 75/374 (20%)

Query: 38  LPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTE 97
           +P     A RD+ GG    A+ + D       G+    G +      +G   E   + T 
Sbjct: 496 VPFFSAKAIRDIAGGNEVLAVVMKD-------GAVFTCGLNKSGQCGNGTFEERVIIATP 548

Query: 98  A--------SIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDK---- 145
                    ++V AA G  H +AV   G VY+WG+ +        G L  G+ + K    
Sbjct: 549 VRALSGIVINMVAAANGCEHMLAVASDGAVYSWGYND-------RGQLGLGSTISKSHTP 601

Query: 146 ---DVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSS 202
              D    +    T  VS       SS G          G+ G    +     Q  +S S
Sbjct: 602 RMIDSLREKYHITTAAVSYHHSAVVSSNGELLMFGMNDCGQLGLDHTQHQHTPQLVDSLS 661

Query: 203 SGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMV 262
           S                   I  VA G  HT+A++  G+V+ +G    GQLGLG    M 
Sbjct: 662 SQ-----------------VITEVACGLYHTIAITSGGEVYSFGKNDYGQLGLGHARNM- 703

Query: 263 SSPHPIP-CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
                +P  +++S G+                        +  ++CG  H+  I++ G L
Sbjct: 704 ----KVPTLVKTSLGES--------------------DEKIVAVSCGYYHTVTISEKGKL 739

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
           +T+G   YGQ G GS D + S   V   L  +I+  + G +HT+ + S+G V  FG N  
Sbjct: 740 ITWGRNDYGQLGIGSKDHKNSAQYVPLPLSSKIKTASCGCYHTLILMSNGRVMVFGRNNK 799

Query: 382 GQLGTGGDQAETLP 395
           GQLG G   + TLP
Sbjct: 800 GQLGAG---SRTLP 810



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/231 (25%), Positives = 98/231 (42%), Gaps = 18/231 (7%)

Query: 60  ISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEV 119
           +S + +L+ +G  +D GQ  +   +H   P+     +   I + A G  H +A+T GGEV
Sbjct: 626 VSSNGELLMFG-MNDCGQLGLDHTQHQHTPQLVDSLSSQVITEVACGLYHTIAITSGGEV 684

Query: 120 YTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGR 179
           Y++G  +       +G L  G   +  V     + L E  S    V+ S G   + T   
Sbjct: 685 YSFGKND-------YGQLGLGHARNMKVPTLVKTSLGE--SDEKIVAVSCGYYHTVTISE 735

Query: 180 GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDI 239
                  K + I+  +        G ++       V L    +I T + G  HTL L   
Sbjct: 736 -------KGKLITWGRNDYGQLGIGSKDHKNSAQYVPLPLSSKIKTASCGCYHTLILMSN 788

Query: 240 GQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNS 290
           G+V  +G   +GQLG GSR  + S+  P+P   +S   D    ++ G  +S
Sbjct: 789 GRVMVFGRNNKGQLGAGSRT-LPSADLPLPVPSNSLANDEVVRIAAGFYSS 838


>gi|449522147|ref|XP_004168089.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
           [Cucumis sativus]
          Length = 302

 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 87/252 (34%), Positives = 130/252 (51%), Gaps = 32/252 (12%)

Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
           S  P  +    G+ I  VAAG  HT A+++ G+++GWG+G  G LGLG            
Sbjct: 17  SLVPQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYGNLGLG------------ 64

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL 328
                    DR+  L    V+S      V G+ +  +ACG RH+  ++  G L T+GW  
Sbjct: 65  ---------DRNDRLVPQKVSS------VDGDKMVMVACGWRHTISVSSLGGLYTYGWSK 109

Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGG 388
           YGQ G G  +D L P+ + +L G  I  ++ G  HT+ +++DG +Y +G N+FGQ+G G 
Sbjct: 110 YGQLGHGDFEDRLVPHRLEALRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQVGAGD 169

Query: 389 DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNI 448
           +     P  +  P  + V    +SCG RHT  + D   VF WG    GQLG G+ +DRN 
Sbjct: 170 NIDHCSPIQIKFPQDQKV--IQISCGWRHTLAVTDKQNVFSWGRGTNGQLGHGESVDRNT 227

Query: 449 P---SQVTIEGC 457
           P     ++++GC
Sbjct: 228 PMILEALSVDGC 239



 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 82/230 (35%), Positives = 116/230 (50%), Gaps = 30/230 (13%)

Query: 245 WGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKG 304
           WG    GQLGLG+    +  P  I   E                          G  +K 
Sbjct: 1   WGRNQNGQLGLGTTEDSLV-PQKIQAFE--------------------------GISIKM 33

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           +A G  H+A +T+ G L  +GWG YG  G G  +D L P  VSS+ G ++  VA G  HT
Sbjct: 34  VAAGAEHTAAVTEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHT 93

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           I +SS G +Y +G +++GQLG G  +   +P  L+A   +N+    +S G RHT  +  D
Sbjct: 94  ISVSSLGGLYTYGWSKYGQLGHGDFEDRLVPHRLEALRGDNI--SQISGGWRHTMALTTD 151

Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACGWWHTLLLA 473
           GK++ WGWNK+GQ+G GD ID   P Q+   +      ++CGW HTL + 
Sbjct: 152 GKLYGWGWNKFGQVGAGDNIDHCSPIQIKFPQDQKVIQISCGWRHTLAVT 201



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 76/286 (26%), Positives = 119/286 (41%), Gaps = 57/286 (19%)

Query: 69  WGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECV 128
           WG   + GQ  + + +   +P+        SI   AAG  H  AVTE GE++ WGW    
Sbjct: 1   WGRNQN-GQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGW---- 55

Query: 129 PSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSP-----RSQVSRSSGGTSSGTDGRGSGE 183
             GR +G+L  G   D+ V ++ SS   +++       R  +S SS G          G+
Sbjct: 56  --GR-YGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQ 112

Query: 184 EGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVW 243
            G                  GD      P  +    G  I+ ++ G RHT+AL+  G+++
Sbjct: 113 LG-----------------HGDFEDRLVPHRLEALRGDNISQISGGWRHTMALTTDGKLY 155

Query: 244 GWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVK 303
           GWG+   GQ+G G  I   S       I+  + +D+                      V 
Sbjct: 156 GWGWNKFGQVGAGDNIDHCSP------IQIKFPQDQK---------------------VI 188

Query: 304 GIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSL 349
            I+CG RH+  +TD   + ++G G  GQ G G + D  +P  + +L
Sbjct: 189 QISCGWRHTLAVTDKQNVFSWGRGTNGQLGHGESVDRNTPMILEAL 234


>gi|449457319|ref|XP_004146396.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
           sativus]
          Length = 438

 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 91/254 (35%), Positives = 131/254 (51%), Gaps = 30/254 (11%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G++I  +A G  H LA++  G+V  WG    GQLGLG+    +  P  I   E       
Sbjct: 112 GLKIRQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLV-PQKIQAFE------- 163

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDD 339
                              G  +K +A G  H+A +T+ G L  +GWG YG  G G  +D
Sbjct: 164 -------------------GISIKMVAAGAEHTAAVTEDGELFGWGWGRYGNLGLGDRND 204

Query: 340 ELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLD 399
            L P  VSS+ G ++  VA G  HTI +SS G +Y +G +++GQLG G  +   +P  L+
Sbjct: 205 RLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGDFEDRLVPHRLE 264

Query: 400 APSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCV 458
           A   +N+    +S G RHT  +  DGK++ WGWNK+GQ+G GD ID   P Q+   +   
Sbjct: 265 ALRGDNI--SQISGGWRHTMALTTDGKLYGWGWNKFGQVGAGDNIDHCSPIQIKFPQDQK 322

Query: 459 PRNVACGWWHTLLL 472
              ++CGW HTL +
Sbjct: 323 VIQISCGWRHTLAV 336



 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 87/257 (33%), Positives = 132/257 (51%), Gaps = 32/257 (12%)

Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
           S  P  +    G+ I  VAAG  HT A+++ G+++GWG+G  G LGLG            
Sbjct: 153 SLVPQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYGNLGLG------------ 200

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL 328
                    DR+  L    V+S      V G+ +  +ACG RH+  ++  G L T+GW  
Sbjct: 201 ---------DRNDRLVPQKVSS------VDGDKMVMVACGWRHTISVSSLGGLYTYGWSK 245

Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGG 388
           YGQ G G  +D L P+ + +L G  I  ++ G  HT+ +++DG +Y +G N+FGQ+G G 
Sbjct: 246 YGQLGHGDFEDRLVPHRLEALRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQVGAGD 305

Query: 389 DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNI 448
           +     P  +  P  + V    +SCG RHT  + D   VF WG    GQLG G+ +DRN 
Sbjct: 306 NIDHCSPIQIKFPQDQKV--IQISCGWRHTLAVTDKQNVFSWGRGTNGQLGHGESVDRNT 363

Query: 449 P---SQVTIEGCVPRNV 462
           P     ++++GC  + +
Sbjct: 364 PMILEALSVDGCSGQQI 380



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 83/255 (32%), Positives = 137/255 (53%), Gaps = 31/255 (12%)

Query: 218 NPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
           +P  R+  ++AG  H++AL     V  WG G +GQLG G                    +
Sbjct: 5   SPVRRVLFISAGASHSVALLSGNIVCSWGRGEDGQLGHGD------------------AE 46

Query: 278 DRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA-LLTFGWGLYGQCGQGS 336
           DR +     +++         G+ +  + CG  H+   + A   + ++GWG +G+ G G+
Sbjct: 47  DRLSPTQLSALD---------GHEIVSVTCGADHTTAYSVARTEVYSWGWGDFGRLGHGN 97

Query: 337 TDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPR 396
           + D L+P  + +L G++I  +A G  H + ++ +G+V ++G NQ GQLG G  +   +P+
Sbjct: 98  SSDLLTPKPIKALHGLKIRQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQ 157

Query: 397 LLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIE 455
            + A   E +  K V+ GA HTA + +DG++F WGW +YG LGLGD  DR +P +V +++
Sbjct: 158 KIQA--FEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVD 215

Query: 456 GCVPRNVACGWWHTL 470
           G     VACGW HT+
Sbjct: 216 GDKMVMVACGWRHTI 230



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 83/317 (26%), Positives = 136/317 (42%), Gaps = 48/317 (15%)

Query: 89  PEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVF 148
           P+P        I + A G +HC+AVT  GEV +WG  +        G L  GT  D  V 
Sbjct: 104 PKPIKALHGLKIRQIACGDSHCLAVTMEGEVQSWGRNQN-------GQLGLGTTEDSLVP 156

Query: 149 ERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENL 208
           ++  +F  E +S +   + +    +   DG   G    +   + L          GD N 
Sbjct: 157 QKIQAF--EGISIKMVAAGAEHTAAVTEDGELFGWGWGRYGNLGL----------GDRND 204

Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS-RIRMVSSPHP 267
              P  V+   G ++  VA G RHT+++S +G ++ +G+   GQLG G    R+V  PH 
Sbjct: 205 RLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGDFEDRLV--PHR 262

Query: 268 IPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWG 327
           +  +                           G+ +  I+ G RH+  +T  G L  +GW 
Sbjct: 263 LEALR--------------------------GDNISQISGGWRHTMALTTDGKLYGWGWN 296

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG 387
            +GQ G G   D  SP  +      ++  ++ G  HT+ ++   +V+++G    GQLG G
Sbjct: 297 KFGQVGAGDNIDHCSPIQIKFPQDQKVIQISCGWRHTLAVTDKQNVFSWGRGTNGQLGHG 356

Query: 388 GDQAETLPRLLDAPSLE 404
                  P +L+A S++
Sbjct: 357 ESVDRNTPMILEALSVD 373



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 127/302 (42%), Gaps = 57/302 (18%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
           G    +A++   ++ +WG   + GQ  + + +   +P+        SI   AAG  H  A
Sbjct: 121 GDSHCLAVTMEGEVQSWGRNQN-GQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAA 179

Query: 113 VTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSP-----RSQVSR 167
           VTE GE++ WGW      GR +G+L  G   D+ V ++ SS   +++       R  +S 
Sbjct: 180 VTEDGELFGWGW------GR-YGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISV 232

Query: 168 SSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVA 227
           SS G          G+ G                  GD      P  +    G  I+ ++
Sbjct: 233 SSLGGLYTYGWSKYGQLG-----------------HGDFEDRLVPHRLEALRGDNISQIS 275

Query: 228 AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGS 287
            G RHT+AL+  G+++GWG+   GQ+G G  I   S       I+  + +D+        
Sbjct: 276 GGWRHTMALTTDGKLYGWGWNKFGQVGAGDNIDHCSP------IQIKFPQDQK------- 322

Query: 288 VNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVS 347
                         V  I+CG RH+  +TD   + ++G G  GQ G G + D  +P  + 
Sbjct: 323 --------------VIQISCGWRHTLAVTDKQNVFSWGRGTNGQLGHGESVDRNTPMILE 368

Query: 348 SL 349
           +L
Sbjct: 369 AL 370


>gi|255563857|ref|XP_002522929.1| uvb-resistance protein uvr8, putative [Ricinus communis]
 gi|223537856|gb|EEF39472.1| uvb-resistance protein uvr8, putative [Ricinus communis]
          Length = 437

 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 99/296 (33%), Positives = 150/296 (50%), Gaps = 33/296 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIG-QVWGWGYGGEGQLGLGSRIRMV 262
           GD      P +++   G+ I +V  G  HT+A S+    V+ WG+G  G+LG G+   + 
Sbjct: 49  GDAQDRLSPTILSTLEGLEIISVICGADHTIAYSESHTDVYSWGWGDFGRLGHGNSSDLF 108

Query: 263 SSPHPIPCIE-----------------------SSYGKDRSAALSRGSVNSEGPGFRVP- 298
           + P PI  +                         S+G++++  L  G+        ++  
Sbjct: 109 T-PQPIRQLHGLKIKQIACGDSHCLAVTMEGQVQSWGRNQNGQLGLGTTEDSLVPQKIQA 167

Query: 299 --GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG 356
             G  +K +A G  H+A +T+ G L  +GWG YG  G G   D L P  VS   G ++  
Sbjct: 168 FQGVPIKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRKDRLVPEKVSLPHGEKMVM 227

Query: 357 VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR 416
           VA G  HTI +SS G +Y +G +++GQLG G      +P  L+A  L+      +S G R
Sbjct: 228 VACGWRHTISVSSSGGLYTYGWSKYGQLGHGDYADHLIPHQLEA--LQGSFISQISGGWR 285

Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT--IEGCVPRNVACGWWHTL 470
           HT  +  DGK++ WGWNK+GQ+G+GD +DR+ P QV   +E  V   ++CGW HTL
Sbjct: 286 HTMAVTSDGKLYGWGWNKFGQVGVGDNVDRSSPVQVKLPLEQKVIL-ISCGWRHTL 340



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 115/399 (28%), Positives = 175/399 (43%), Gaps = 52/399 (13%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
           G   ++A+     + TWG  +D GQ      +    P          I+    G  H +A
Sbjct: 22  GASHSVALLSGNVVCTWGRGED-GQLGHGDAQDRLSPTILSTLEGLEIISVICGADHTIA 80

Query: 113 VTEGG-EVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG 171
            +E   +VY+WGW +       FG L  G G   D+F  Q       +  +      S  
Sbjct: 81  YSESHTDVYSWGWGD-------FGRL--GHGNSSDLFTPQPIRQLHGLKIKQIACGDSHC 131

Query: 172 TSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGR 231
            +   +G+      ++  ++ L          G    S  P  +    GV I  VAAG  
Sbjct: 132 LAVTMEGQVQSWGRNQNGQLGL----------GTTEDSLVPQKIQAFQGVPIKMVAAGAE 181

Query: 232 HTLALSDIGQVWGWGYGGEGQLGLGSRI-RMVSSPHPIPCIESSYGKDRSAALSRGSVNS 290
           HT A+++ G+++GWG+G  G LGLG R  R+V     +P                     
Sbjct: 182 HTAAVTEDGELYGWGWGRYGNLGLGDRKDRLVPEKVSLP--------------------- 220

Query: 291 EGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLL 350
                   G  +  +ACG RH+  ++ +G L T+GW  YGQ G G   D L P+ + +L 
Sbjct: 221 -------HGEKMVMVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDYADHLIPHQLEALQ 273

Query: 351 GIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
           G  I  ++ G  HT+ ++SDG +Y +G N+FGQ+G G +   + P  +  P  + V    
Sbjct: 274 GSFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDRSSPVQVKLPLEQKV--IL 331

Query: 411 VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIP 449
           +SCG RHT  + +   VF WG    GQLG G+  DRN+P
Sbjct: 332 ISCGWRHTLAVTERQNVFSWGRGTNGQLGNGECTDRNVP 370



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/254 (32%), Positives = 133/254 (52%), Gaps = 31/254 (12%)

Query: 219 PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
           P  R+  ++AG  H++AL     V  WG G +GQLG G     +S     P I S+    
Sbjct: 12  PVRRVLLISAGASHSVALLSGNVVCTWGRGEDGQLGHGDAQDRLS-----PTILST---- 62

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA-LLTFGWGLYGQCGQGST 337
                             + G  +  + CG  H+   +++   + ++GWG +G+ G G++
Sbjct: 63  ------------------LEGLEIISVICGADHTIAYSESHTDVYSWGWGDFGRLGHGNS 104

Query: 338 DDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
            D  +P  +  L G++I+ +A G  H + ++ +G V ++G NQ GQLG G  +   +P+ 
Sbjct: 105 SDLFTPQPIRQLHGLKIKQIACGDSHCLAVTMEGQVQSWGRNQNGQLGLGTTEDSLVPQK 164

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EG 456
           + A   + V  K V+ GA HTA + +DG+++ WGW +YG LGLGD  DR +P +V++  G
Sbjct: 165 IQA--FQGVPIKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRKDRLVPEKVSLPHG 222

Query: 457 CVPRNVACGWWHTL 470
                VACGW HT+
Sbjct: 223 EKMVMVACGWRHTI 236



 Score = 43.5 bits (101), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 1/72 (1%)

Query: 52  GGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCV 111
           GG    MA++   KL  WG  +  GQ  V        P    LP E  ++  + GW H +
Sbjct: 282 GGWRHTMAVTSDGKLYGWG-WNKFGQVGVGDNVDRSSPVQVKLPLEQKVILISCGWRHTL 340

Query: 112 AVTEGGEVYTWG 123
           AVTE   V++WG
Sbjct: 341 AVTERQNVFSWG 352


>gi|302799595|ref|XP_002981556.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
 gi|300150722|gb|EFJ17371.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
          Length = 430

 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 87/250 (34%), Positives = 129/250 (51%), Gaps = 30/250 (12%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR-IRMV 262
           GD + S  P  +    GV +  +AAG  HT A++D G+++GWG+G  G LGLG R  RM+
Sbjct: 145 GDTDDSLVPHKLLAFEGVSVKMLAAGAEHTAAVTDSGKLYGWGWGRYGNLGLGDRGDRML 204

Query: 263 SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL 322
             P  +P +    G ++                         +ACG RH+  ++ +G L 
Sbjct: 205 --PAEVPAV----GDEKMCM----------------------VACGWRHTIAVSQSGKLY 236

Query: 323 TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFG 382
           T+GW  YGQ G G   D L P+ V++L    I  V+ G  HT+ ++  G +Y +G N+FG
Sbjct: 237 TYGWSKYGQLGHGDYADHLLPHQVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFG 296

Query: 383 QLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGD 442
           Q+G+G     T P+L+  P  ++     VSCG RHT  + D   V+ WG    GQLG GD
Sbjct: 297 QVGSGDVDDHTSPQLISIPG-QHQRVVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLGHGD 355

Query: 443 VIDRNIPSQV 452
            +DR+ P  +
Sbjct: 356 AVDRSAPKGI 365



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 91/262 (34%), Positives = 129/262 (49%), Gaps = 31/262 (11%)

Query: 211 FPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPC 270
            P  +    G+ I  +A G  H LA++  G+V+ WG    GQLGLG     +  PH +  
Sbjct: 100 VPHPIKALQGLEIRQIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLV-PHKLLA 158

Query: 271 IESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
            E                          G  VK +A G  H+A +TD+G L  +GWG YG
Sbjct: 159 FE--------------------------GVSVKMLAAGAEHTAAVTDSGKLYGWGWGRYG 192

Query: 331 QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
             G G   D + P  V ++   ++  VA G  HTI +S  G +Y +G +++GQLG G   
Sbjct: 193 NLGLGDRGDRMLPAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYA 252

Query: 391 AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
              LP  + A +  N+    VS G RHT  + + GK++ WGWNK+GQ+G GDV D   P 
Sbjct: 253 DHLLPHQVAALAEFNI--TQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGDVDDHTSPQ 310

Query: 451 QVTIEGCVPR--NVACGWWHTL 470
            ++I G   R   V+CGW HT+
Sbjct: 311 LISIPGQHQRVVQVSCGWRHTV 332



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 86/257 (33%), Positives = 133/257 (51%), Gaps = 37/257 (14%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
           ++  V+AG  HT+AL     V  +G G +GQLG G                    +DR  
Sbjct: 6   KVLLVSAGASHTVALLSGQVVCSFGRGEDGQLGHGD------------------AEDRLL 47

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAG-ALLTFGWGLYGQCGQGSTDDE 340
               G++N            +  +ACG  H+   +     + ++GWG +G+ G G++ D 
Sbjct: 48  PRIIGALND---------CEISLVACGADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDL 98

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
             P+ + +L G++I  +A G  H + +++DG+VY++G NQ GQLG G      +P  L A
Sbjct: 99  FVPHPIKALQGLEIRQIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLA 158

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEG---- 456
              E V  K ++ GA HTA + D GK++ WGW +YG LGLGD  DR +P++V   G    
Sbjct: 159 --FEGVSVKMLAAGAEHTAAVTDSGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVGDEKM 216

Query: 457 CVPRNVACGWWHTLLLA 473
           C+   VACGW HT+ ++
Sbjct: 217 CM---VACGWRHTIAVS 230



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 73/288 (25%), Positives = 116/288 (40%), Gaps = 45/288 (15%)

Query: 88  IPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDV 147
           +P P        I + A G +HC+AVT  GEVY+WG  +        G L  G   D  V
Sbjct: 100 VPHPIKALQGLEIRQIACGDSHCLAVTADGEVYSWGRNQN-------GQLGLGDTDDSLV 152

Query: 148 FERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDEN 207
             +  +F  E VS +   + +    +    G+  G    +   + L          GD  
Sbjct: 153 PHKLLAF--EGVSVKMLAAGAEHTAAVTDSGKLYGWGWGRYGNLGL----------GDRG 200

Query: 208 LSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS---------- 257
               P  V      ++  VA G RHT+A+S  G+++ +G+   GQLG G           
Sbjct: 201 DRMLPAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYADHLLPHQV 260

Query: 258 ------RIRMVSS--PHPIPCIESS----YGKDRSAALSRGSVNSEGPG--FRVPGNY-- 301
                  I  VS    H +   E+     +G ++   +  G V+         +PG +  
Sbjct: 261 AALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGDVDDHTSPQLISIPGQHQR 320

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSL 349
           V  ++CG RH+  +TD   + ++G G  GQ G G   D  +P  + +L
Sbjct: 321 VVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLGHGDAVDRSAPKGIQAL 368



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 102/233 (43%), Gaps = 44/233 (18%)

Query: 53  GCGFAMAISDSRKLITWG--STDDLGQSYVTSGKHGE--IPEPFPLPTEASIVKAAAGWA 108
           G     A++DS KL  WG     +LG      G  G+  +P   P   +  +   A GW 
Sbjct: 170 GAEHTAAVTDSGKLYGWGWGRYGNLGL-----GDRGDRMLPAEVPAVGDEKMCMVACGWR 224

Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTE----QVSP--R 162
           H +AV++ G++YT+GW +       +G L  G   D  +   Q + L E    QVS   R
Sbjct: 225 HTIAVSQSGKLYTYGWSK-------YGQLGHGDYADH-LLPHQVAALAEFNITQVSGGWR 276

Query: 163 SQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPG-- 220
             V+ +  G   G      G+ G                 SGD +    P L+++ PG  
Sbjct: 277 HTVALTEAGKLYGWGWNKFGQVG-----------------SGDVDDHTSPQLISI-PGQH 318

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES 273
            R+  V+ G RHT+A++D   V+ WG G  GQLG G  +   S+P  I  + +
Sbjct: 319 QRVVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLGHGDAVDR-SAPKGIQALSA 370



 Score = 44.7 bits (104), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 7/82 (8%)

Query: 49  VCGGGCGF--AMAISDSRKLITWGSTDDLGQSYVTSGKHGE--IPEPFPLPTEASIVKAA 104
           +C   CG+   +A+S S KL T+G +   GQ  +  G + +  +P       E +I + +
Sbjct: 216 MCMVACGWRHTIAVSQSGKLYTYGWSK-YGQ--LGHGDYADHLLPHQVAALAEFNITQVS 272

Query: 105 AGWAHCVAVTEGGEVYTWGWKE 126
            GW H VA+TE G++Y WGW +
Sbjct: 273 GGWRHTVALTEAGKLYGWGWNK 294


>gi|302760205|ref|XP_002963525.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
 gi|300168793|gb|EFJ35396.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
          Length = 430

 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 115/402 (28%), Positives = 179/402 (44%), Gaps = 51/402 (12%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
           G    +A+   + + ++G  +D GQ      +   +P       +  I   A G  H  A
Sbjct: 13  GASHTVALLSGQVVCSFGRGED-GQLGHGDAEDRHLPRIIGALNDCEISLVACGADHTTA 71

Query: 113 VTEGG-EVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG 171
            +     +Y+WGW +       FG L  G G   D+F        + +  R      S  
Sbjct: 72  YSATRLTIYSWGWGD-------FGRL--GHGNSSDLFVPHPIKALQGLEIRQIACGDSHC 122

Query: 172 TSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGR 231
            +   DG       ++  ++ L          GD + S  P  +    GV +  +AAG  
Sbjct: 123 LAVTADGEVYSWGRNQNGQLGL----------GDTDDSLVPHKLLAFEGVSVKMLAAGAE 172

Query: 232 HTLALSDIGQVWGWGYGGEGQLGLGSR-IRMVSSPHPIPCIESSYGKDRSAALSRGSVNS 290
           HT A++D G+++GWG+G  G LGLG R  RM+  P  +P +    G ++           
Sbjct: 173 HTAAVTDGGKLYGWGWGRYGNLGLGDRGDRML--PAEVPAV----GDEKMCM-------- 218

Query: 291 EGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLL 350
                         +ACG RH+  ++ +G L T+GW  YGQ G G   D L P+ V++L 
Sbjct: 219 --------------VACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYADHLLPHQVAALA 264

Query: 351 GIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
              I  V+ G  HT+ ++  G +Y +G N+FGQ+G+G     T P+L+  P  ++     
Sbjct: 265 EFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGDVDDHTSPQLISIPG-QHQRVVQ 323

Query: 411 VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
           VSCG RHT  + D   V+ WG    GQLG GD +DR+ P  +
Sbjct: 324 VSCGWRHTVAVTDKNNVYSWGRGTSGQLGHGDAVDRSAPKGI 365



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 91/262 (34%), Positives = 128/262 (48%), Gaps = 31/262 (11%)

Query: 211 FPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPC 270
            P  +    G+ I  +A G  H LA++  G+V+ WG    GQLGLG     +  PH +  
Sbjct: 100 VPHPIKALQGLEIRQIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLV-PHKLLA 158

Query: 271 IESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
            E                          G  VK +A G  H+A +TD G L  +GWG YG
Sbjct: 159 FE--------------------------GVSVKMLAAGAEHTAAVTDGGKLYGWGWGRYG 192

Query: 331 QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
             G G   D + P  V ++   ++  VA G  HTI +S  G +Y +G +++GQLG G   
Sbjct: 193 NLGLGDRGDRMLPAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYA 252

Query: 391 AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
              LP  + A +  N+    VS G RHT  + + GK++ WGWNK+GQ+G GDV D   P 
Sbjct: 253 DHLLPHQVAALAEFNI--TQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGDVDDHTSPQ 310

Query: 451 QVTIEGCVPR--NVACGWWHTL 470
            ++I G   R   V+CGW HT+
Sbjct: 311 LISIPGQHQRVVQVSCGWRHTV 332



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 86/257 (33%), Positives = 133/257 (51%), Gaps = 37/257 (14%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
           ++  V+AG  HT+AL     V  +G G +GQLG G                    +DR  
Sbjct: 6   KVLLVSAGASHTVALLSGQVVCSFGRGEDGQLGHGD------------------AEDRHL 47

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAG-ALLTFGWGLYGQCGQGSTDDE 340
               G++N            +  +ACG  H+   +     + ++GWG +G+ G G++ D 
Sbjct: 48  PRIIGALND---------CEISLVACGADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDL 98

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
             P+ + +L G++I  +A G  H + +++DG+VY++G NQ GQLG G      +P  L A
Sbjct: 99  FVPHPIKALQGLEIRQIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLA 158

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEG---- 456
              E V  K ++ GA HTA + D GK++ WGW +YG LGLGD  DR +P++V   G    
Sbjct: 159 --FEGVSVKMLAAGAEHTAAVTDGGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVGDEKM 216

Query: 457 CVPRNVACGWWHTLLLA 473
           C+   VACGW HT+ ++
Sbjct: 217 CM---VACGWRHTIAVS 230



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 73/299 (24%), Positives = 119/299 (39%), Gaps = 60/299 (20%)

Query: 58  MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGG 117
           +A++   ++ +WG   + GQ  +       +P         S+   AAG  H  AVT+GG
Sbjct: 123 LAVTADGEVYSWGRNQN-GQLGLGDTDDSLVPHKLLAFEGVSVKMLAAGAEHTAAVTDGG 181

Query: 118 EVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSP-----RSQVSRSSGGT 172
           ++Y WGW      GR +G+L  G   D+ +     +   E++       R  ++ S  G 
Sbjct: 182 KLYGWGW------GR-YGNLGLGDRGDRMLPAEVPAVGDEKMCMVACGWRHTIAVSQSGK 234

Query: 173 SSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRH 232
                    G+ G                  GD      P  V       I  V+ G RH
Sbjct: 235 LYTYGWSKYGQLGH-----------------GDYADHLLPHQVAALAEFNITQVSGGWRH 277

Query: 233 TLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEG 292
           T+AL++ G+++GWG+   GQ+G G  +   +SP  I                        
Sbjct: 278 TVALTEAGKLYGWGWNKFGQVGSGD-VDDHTSPQLIS----------------------- 313

Query: 293 PGFRVPGNY--VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSL 349
               +PG +  V  ++CG RH+  +TD   + ++G G  GQ G G   D  +P  + +L
Sbjct: 314 ----IPGQHQRVVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLGHGDAVDRSAPKGIQAL 368



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 67/233 (28%), Positives = 101/233 (43%), Gaps = 44/233 (18%)

Query: 53  GCGFAMAISDSRKLITWG--STDDLGQSYVTSGKHGE--IPEPFPLPTEASIVKAAAGWA 108
           G     A++D  KL  WG     +LG      G  G+  +P   P   +  +   A GW 
Sbjct: 170 GAEHTAAVTDGGKLYGWGWGRYGNLGL-----GDRGDRMLPAEVPAVGDEKMCMVACGWR 224

Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTE----QVSP--R 162
           H +AV++ G++YT+GW +       +G L  G   D  +   Q + L E    QVS   R
Sbjct: 225 HTIAVSQSGKLYTYGWSK-------YGQLGHGDYADH-LLPHQVAALAEFNITQVSGGWR 276

Query: 163 SQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPG-- 220
             V+ +  G   G      G+ G                 SGD +    P L+++ PG  
Sbjct: 277 HTVALTEAGKLYGWGWNKFGQVG-----------------SGDVDDHTSPQLISI-PGQH 318

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES 273
            R+  V+ G RHT+A++D   V+ WG G  GQLG G  +   S+P  I  + +
Sbjct: 319 QRVVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLGHGDAVDR-SAPKGIQALSA 370



 Score = 44.7 bits (104), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 7/82 (8%)

Query: 49  VCGGGCGF--AMAISDSRKLITWGSTDDLGQSYVTSGKHGE--IPEPFPLPTEASIVKAA 104
           +C   CG+   +A+S S KL T+G +   GQ  +  G + +  +P       E +I + +
Sbjct: 216 MCMVACGWRHTIAVSQSGKLYTYGWSK-YGQ--LGHGDYADHLLPHQVAALAEFNITQVS 272

Query: 105 AGWAHCVAVTEGGEVYTWGWKE 126
            GW H VA+TE G++Y WGW +
Sbjct: 273 GGWRHTVALTEAGKLYGWGWNK 294


>gi|301117544|ref|XP_002906500.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262107849|gb|EEY65901.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 4048

 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 92/258 (35%), Positives = 127/258 (49%), Gaps = 31/258 (12%)

Query: 220 GVRIATVAA--GGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
           G+ I+ VAA  G  H LA++  G V+ WGY   GQLGLGS I    +P  I  +   Y  
Sbjct: 549 GIAISMVAAANGCEHMLAVASDGAVFSWGYNDRGQLGLGSTISKSHTPRMIDSLREKY-- 606

Query: 278 DRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST 337
                                  ++   A    HSAV++  G LLTFG    GQ G   T
Sbjct: 607 -----------------------HITTAAVSYHHSAVVSSNGELLTFGMNDCGQLGLDHT 643

Query: 338 DDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
             + +P  V +L    +   A GL+HT+  +SDG+VY+FG N +GQLG G  +    P L
Sbjct: 644 QHQHTPQVVDALSSQVVTKAACGLYHTVAATSDGEVYSFGKNDYGQLGLGHARNIKTPAL 703

Query: 398 LDAPSLENVHSK--SVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
           +   SL     K  +VSCG  HT  I++ GK+  WG N YGQLG+G    +N    V + 
Sbjct: 704 VKT-SLGESDEKIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGIGSKEHKNSAQFVPLP 762

Query: 456 GCVP-RNVACGWWHTLLL 472
                +N +CG +H+L+L
Sbjct: 763 MSSKIKNASCGCYHSLIL 780



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 84/333 (25%), Positives = 137/333 (41%), Gaps = 59/333 (17%)

Query: 99  SIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDK-------DVFERQ 151
           S+V AA G  H +AV   G V++WG+ +        G L  G+ + K       D    +
Sbjct: 553 SMVAAANGCEHMLAVASDGAVFSWGYND-------RGQLGLGSTISKSHTPRMIDSLREK 605

Query: 152 SSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAF 211
               T  VS       SS G          G+ G    +     Q  ++ SS        
Sbjct: 606 YHITTAAVSYHHSAVVSSNGELLTFGMNDCGQLGLDHTQHQHTPQVVDALSS-------- 657

Query: 212 PCLVTLNPGVRIATVAAGG-RHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPC 270
                     ++ T AA G  HT+A +  G+V+ +G    GQLGLG   R + +P     
Sbjct: 658 ----------QVVTKAACGLYHTVAATSDGEVYSFGKNDYGQLGLG-HARNIKTP---AL 703

Query: 271 IESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
           +++S G+                        +  ++CG  H+  I++ G L+T+G   YG
Sbjct: 704 VKTSLGES--------------------DEKIVAVSCGYYHTVTISEKGKLITWGRNDYG 743

Query: 331 QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
           Q G GS + + S   V   +  +I+  + G +H++ + S+G V  FG N  GQLG G   
Sbjct: 744 QLGIGSKEHKNSAQFVPLPMSSKIKNASCGCYHSLILMSNGRVMVFGRNNKGQLGAGART 803

Query: 391 AET--LPRLLDAPSLENVHSKSVSCGARHTAVI 421
             +  LP  + + SL N     ++ G   + ++
Sbjct: 804 LSSADLPLPVPSNSLANDEVVRIAAGFYSSYIL 836


>gi|222623048|gb|EEE57180.1| hypothetical protein OsJ_07117 [Oryza sativa Japonica Group]
          Length = 463

 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/257 (33%), Positives = 134/257 (52%), Gaps = 27/257 (10%)

Query: 219 PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
           P   +  ++AG  H++AL   G V  WG G +GQLG G      +   P+P + ++   D
Sbjct: 18  PERSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGD-----AEDRPVPTVLTAAFDD 72

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAG-ALLTFGWGLYGQCGQGST 337
                              PG     + CG  H+   +D    L ++GWG +G+ G G++
Sbjct: 73  ------------------APGGVASVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNS 114

Query: 338 DDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
            D  +P  + +L G++I  +A G  H + ++  G V+++G NQ GQLG G  +   LP+ 
Sbjct: 115 SDVFNPQPIQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQK 174

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEG 456
           + A   E V  K ++ GA HTA + +DG ++ WGW +YG LGLGD  DR IP +V ++ G
Sbjct: 175 IQA--FEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNG 232

Query: 457 CVPRNVACGWWHTLLLA 473
                VACGW HT+ ++
Sbjct: 233 QKMVLVACGWRHTITVS 249



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 128/402 (31%), Positives = 174/402 (43%), Gaps = 65/402 (16%)

Query: 90  EPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFE 149
           E  P   E S+V  +AG +H VA+  GG V +WG  E        G L  G   D+ V  
Sbjct: 12  EAVPEAPERSVVLISAGASHSVALLSGGVVCSWGRGED-------GQLGHGDAEDRPV-- 62

Query: 150 RQSSFLTEQVSPRSQVSRSSGGTSS----GTDGRGSGEEGSKRRRISLAKQTAESSSSGD 205
              + LT      +    + GG +S    G D   +     + +  S           G+
Sbjct: 63  --PTVLT------AAFDDAPGGVASVVICGAD-HTTAYSDEELQLYSWGWGDFGRLGHGN 113

Query: 206 ENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSP 265
            +    P  +    GVRI  +A G  H LA++  G V  WG    GQLGLG+    +  P
Sbjct: 114 SSDVFNPQPIQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLL-P 172

Query: 266 HPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFG 325
             I   E                          G  VK IA G  H+A +T+ G L  +G
Sbjct: 173 QKIQAFE--------------------------GVRVKMIAAGAEHTAAVTEDGDLYGWG 206

Query: 326 WGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLG 385
           WG YG  G G  DD L P  VSS+ G ++  VA G  HTI +SS G +Y +G +++GQLG
Sbjct: 207 WGRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLG 266

Query: 386 TGGDQAETLPRLLDAPSLENVHSKS-------------VSCGARHTAVIADDGKVFCWGW 432
            G  +   +P  L+A     +  +                 G      +A DGK++ WGW
Sbjct: 267 HGDFEDHLVPHKLEALKDTTISQEEAVELIFFFLGDEGFRVGGGIQWALAADGKLYGWGW 326

Query: 433 NKYGQLGLGDVIDRNIPSQVTI--EGCVPRNVACGWWHTLLL 472
           NK+GQ+G+GD  D   P QV    E  V + VACGW HTL L
Sbjct: 327 NKFGQVGVGDNEDHCSPVQVNFPNEQKVVQ-VACGWRHTLAL 367



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/264 (31%), Positives = 127/264 (48%), Gaps = 44/264 (16%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
           G+   S  P  +    GVR+  +AAG  HT A+++ G ++GWG+G  G LGLG R     
Sbjct: 164 GNTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDR----- 218

Query: 264 SPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLT 323
                         DR       SVN         G  +  +ACG RH+  ++ +G++ T
Sbjct: 219 -------------DDRLIPEKVSSVN---------GQKMVLVACGWRHTITVSSSGSIYT 256

Query: 324 FGWGLYGQCGQGSTDDELSPNCVSSLLGIQI---------------EGVAAGLWHTICIS 368
           +GW  YGQ G G  +D L P+ + +L    I               EG   G      ++
Sbjct: 257 YGWSKYGQLGHGDFEDHLVPHKLEALKDTTISQEEAVELIFFFLGDEGFRVGGGIQWALA 316

Query: 369 SDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVF 428
           +DG +Y +G N+FGQ+G G ++    P  ++ P+ + V    V+CG RHT  + +   VF
Sbjct: 317 ADGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQKV--VQVACGWRHTLALTEAKNVF 374

Query: 429 CWGWNKYGQLGLGDVIDRNIPSQV 452
            WG    GQLG G+++DRNIP  +
Sbjct: 375 SWGRGTSGQLGHGEIVDRNIPKMI 398



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 98/378 (25%), Positives = 165/378 (43%), Gaps = 50/378 (13%)

Query: 38  LPLTVGSAWRDVCGG-------GCGFAMAISDSR-KLITWGSTDDLGQSYVTSGKHGEI- 88
           +P  + +A+ D  GG       G     A SD   +L +WG   D G+  +  G   ++ 
Sbjct: 62  VPTVLTAAFDDAPGGVASVVICGADHTTAYSDEELQLYSWG-WGDFGR--LGHGNSSDVF 118

Query: 89  -PEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDV 147
            P+P        I + A G +HC+AVT  G V++WG  +        G L  G   D  +
Sbjct: 119 NPQPIQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQN-------GQLGLGNTEDSLL 171

Query: 148 FERQSSFLTEQVSPRSQVSRSSGGTSSGTD--GRGSGEEGSKRRRISLAKQTAESSSSGD 205
            ++  +F   +V   +  +  +   +   D  G G G  G+    + L          GD
Sbjct: 172 PQKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGN----LGL----------GD 217

Query: 206 ENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSP 265
            +    P  V+   G ++  VA G RHT+ +S  G ++ +G+   GQLG G     +  P
Sbjct: 218 RDDRLIPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLV-P 276

Query: 266 HPIPCI-ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTF 324
           H +  + +++  ++ +  L    +  EG  FRV G     +A  G+          L  +
Sbjct: 277 HKLEALKDTTISQEEAVELIFFFLGDEG--FRVGGGIQWALAADGK----------LYGW 324

Query: 325 GWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQL 384
           GW  +GQ G G  +D  SP  V+     ++  VA G  HT+ ++   +V+++G    GQL
Sbjct: 325 GWNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQL 384

Query: 385 GTGGDQAETLPRLLDAPS 402
           G G      +P+++DA S
Sbjct: 385 GHGEIVDRNIPKMIDALS 402


>gi|356508943|ref|XP_003523212.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 441

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 117/407 (28%), Positives = 183/407 (44%), Gaps = 62/407 (15%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKA------AAG 106
           G    +A+     + +WG  +D GQ       HG+  +  PLPT+ S + A      A G
Sbjct: 22  GASHTVALLSGNVVCSWGRGED-GQL-----GHGDTDDR-PLPTQLSALDAQHIDSIACG 74

Query: 107 WAHCVAVTEG-GEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQV 165
             H +A +E   E+Y+WGW +       FG L  G G   D+   Q     + +  +   
Sbjct: 75  ADHTLAYSESRNELYSWGWGD-------FGRL--GHGNSSDLLIPQPIIALQGLRIKQIA 125

Query: 166 SRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIAT 225
              S   +   +G       ++  ++ L          G+   S  P  +    GV I  
Sbjct: 126 CGDSHCLAVTMEGEVQSWGRNQNGQLGL----------GNTEDSLVPQKIQAFKGVPIKM 175

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
           VAAG  H++A+++ G+++GWG+G  G LGLG R                   DR      
Sbjct: 176 VAAGAEHSVAITENGELYGWGWGRYGNLGLGDR------------------NDRWNPEKV 217

Query: 286 GSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNC 345
            SV+ +          +  +ACG RH+  ++ +G + T+GW  YGQ G G+ +D L P  
Sbjct: 218 SSVDCD---------KMVMVACGWRHTISVSSSGGIYTYGWSKYGQLGHGNFEDSLVPQK 268

Query: 346 VSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLEN 405
           + +L    I  V+ G  H++ ++S G ++ +G N+FGQ+G G +     P  +  P  + 
Sbjct: 269 LQALSDKLISQVSGGWRHSMALTSTGLLFGWGWNKFGQVGVGDNLDHCSPVQVKFPQDQR 328

Query: 406 VHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
           V    +SCG RHT  + +   VF WG    GQLG GD IDRN P  +
Sbjct: 329 V--VQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTIDRNSPKII 373



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 93/295 (31%), Positives = 148/295 (50%), Gaps = 31/295 (10%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDI-GQVWGWGYGGEGQLGLGSRIRMV 262
           GD +    P  ++      I ++A G  HTLA S+   +++ WG+G  G+LG G+   ++
Sbjct: 49  GDTDDRPLPTQLSALDAQHIDSIACGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLL 108

Query: 263 SSPHPIPCIE-----------------------SSYGKDRSAALSRGSVNSEGPGFRV-- 297
             P PI  ++                        S+G++++  L  G+        ++  
Sbjct: 109 I-PQPIIALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGNTEDSLVPQKIQA 167

Query: 298 -PGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG 356
             G  +K +A G  HS  IT+ G L  +GWG YG  G G  +D  +P  VSS+   ++  
Sbjct: 168 FKGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWNPEKVSSVDCDKMVM 227

Query: 357 VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR 416
           VA G  HTI +SS G +Y +G +++GQLG G  +   +P+ L A S + +    VS G R
Sbjct: 228 VACGWRHTISVSSSGGIYTYGWSKYGQLGHGNFEDSLVPQKLQALSDKLI--SQVSGGWR 285

Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACGWWHTL 470
           H+  +   G +F WGWNK+GQ+G+GD +D   P QV   +      ++CGW HT+
Sbjct: 286 HSMALTSTGLLFGWGWNKFGQVGVGDNLDHCSPVQVKFPQDQRVVQISCGWRHTI 340



 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 83/255 (32%), Positives = 134/255 (52%), Gaps = 31/255 (12%)

Query: 218 NPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
           +P  R+  ++AG  HT+AL     V  WG G +GQLG G      +   P+P   S+   
Sbjct: 11  SPPSRVLLISAGASHTVALLSGNVVCSWGRGEDGQLGHGD-----TDDRPLPTQLSA--- 62

Query: 278 DRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDA-GALLTFGWGLYGQCGQGS 336
                              +   ++  IACG  H+   +++   L ++GWG +G+ G G+
Sbjct: 63  -------------------LDAQHIDSIACGADHTLAYSESRNELYSWGWGDFGRLGHGN 103

Query: 337 TDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPR 396
           + D L P  + +L G++I+ +A G  H + ++ +G+V ++G NQ GQLG G  +   +P+
Sbjct: 104 SSDLLIPQPIIALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGNTEDSLVPQ 163

Query: 397 LLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEG 456
            + A   + V  K V+ GA H+  I ++G+++ WGW +YG LGLGD  DR  P +V+   
Sbjct: 164 KIQA--FKGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWNPEKVSSVD 221

Query: 457 CVPR-NVACGWWHTL 470
           C     VACGW HT+
Sbjct: 222 CDKMVMVACGWRHTI 236


>gi|330845272|ref|XP_003294517.1| hypothetical protein DICPUDRAFT_159521 [Dictyostelium purpureum]
 gi|325075008|gb|EGC28958.1| hypothetical protein DICPUDRAFT_159521 [Dictyostelium purpureum]
          Length = 594

 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 85/264 (32%), Positives = 140/264 (53%), Gaps = 30/264 (11%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQ-VWGWGYGGEGQLGLGSRIRMVSSPHPIPC 270
           P   +++  + I T+A G  HTLA+++    ++ WG    GQLGLG +I   + P  I  
Sbjct: 97  PVQFSIDIKISIKTIACGDSHTLAIAENPYGLYSWGCNRWGQLGLGDQINR-NQPTRIN- 154

Query: 271 IESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
                  DR+  ++                    IACG +HS ++++ G L TFG G  G
Sbjct: 155 -----HSDRATFVA--------------------IACGSQHSMIVSNFGELYTFGCGTTG 189

Query: 331 QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
           + G G       P  VSSL+G QI    AG+ H+ C+ S G +Y+FG N++GQLGTG  +
Sbjct: 190 RLGLGDESPRFKPTVVSSLVGKQIVSCGAGVMHSSCVDSTGKIYSFGWNRYGQLGTGSVK 249

Query: 391 AETLP-RLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIP 449
           + TLP ++ +      +H   V CG  HT  ++++G++  +G+N  GQLG+G  +D+  P
Sbjct: 250 SHTLPAKMKETQITSKMHFVKVVCGKNHTLALSNNGEMVSFGFNACGQLGVGSHLDQINP 309

Query: 450 SQVTIEGCVPRNVACGWWHTLLLA 473
           +++     V  ++A G++H+L + 
Sbjct: 310 TKIEFSEKV-LDIATGYYHSLCVT 332



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 105/243 (43%), Gaps = 34/243 (13%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
           GD+     P  +  +       +A G +H++ +S+ G+++ +G G  G+LGLG       
Sbjct: 142 GDQINRNQPTRINHSDRATFVAIACGSQHSMIVSNFGELYTFGCGTTGRLGLGDE----- 196

Query: 264 SPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLT 323
           SP   P + SS                      + G  +     G  HS+ +   G + +
Sbjct: 197 SPRFKPTVVSS----------------------LVGKQIVSCGAGVMHSSCVDSTGKIYS 234

Query: 324 FGWGLYGQCGQGSTDDELSPNCVSSLL---GIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
           FGW  YGQ G GS      P  +        +    V  G  HT+ +S++G++ +FG N 
Sbjct: 235 FGWNRYGQLGTGSVKSHTLPAKMKETQITSKMHFVKVVCGKNHTLALSNNGEMVSFGFNA 294

Query: 381 FGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL 440
            GQLG G    +  P  ++    E V    ++ G  H+  + D+G+ + WG+   G LGL
Sbjct: 295 CGQLGVGSHLDQINPTKIEFS--EKV--LDIATGYYHSLCVTDNGEAYSWGYMSDGGLGL 350

Query: 441 GDV 443
            +V
Sbjct: 351 SEV 353



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 66/108 (61%), Gaps = 2/108 (1%)

Query: 368 SSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK- 426
           + DG VY++G N FGQ G GG+Q   +P  +       +  K+++CG  HT  IA++   
Sbjct: 68  NEDGLVYSWGYNYFGQCGNGGNQTIIVPSPVQFSIDIKISIKTIACGDSHTLAIAENPYG 127

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACGWWHTLLLA 473
           ++ WG N++GQLGLGD I+RN P+++   +      +ACG  H+++++
Sbjct: 128 LYSWGCNRWGQLGLGDQINRNQPTRINHSDRATFVAIACGSQHSMIVS 175



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 90/403 (22%), Positives = 166/403 (41%), Gaps = 88/403 (21%)

Query: 89  PEPFPLPTEASIVKAAAGWAHCVAVTEGGE-VYTWGWKECVPSGRVFGDLSTGTGLDKDV 147
           P  F +  + SI   A G +H +A+ E    +Y+WG          +G L  G  ++++ 
Sbjct: 97  PVQFSIDIKISIKTIACGDSHTLAIAENPYGLYSWGCNR-------WGQLGLGDQINRNQ 149

Query: 148 FERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDEN 207
             R +       S R+     + G+         GE        +    T      GDE+
Sbjct: 150 PTRINH------SDRATFVAIACGSQHSMIVSNFGE------LYTFGCGTTGRLGLGDES 197

Query: 208 LSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHP 267
               P +V+   G +I +  AG  H+  +   G+++ +G+   GQLG GS        H 
Sbjct: 198 PRFKPTVVSSLVGKQIVSCGAGVMHSSCVDSTGKIYSFGWNRYGQLGTGS-----VKSHT 252

Query: 268 IPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWG 327
           +P           A +    + S+        ++VK + CG  H+  +++ G +++FG+ 
Sbjct: 253 LP-----------AKMKETQITSK-------MHFVK-VVCGKNHTLALSNNGEMVSFGFN 293

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG 387
             GQ G GS  D+++P  +      ++  +A G +H++C++ +G+ Y++G    G LG  
Sbjct: 294 ACGQLGVGSHLDQINPTKIE--FSEKVLDIATGYYHSLCVTDNGEAYSWGYMSDGGLGLS 351

Query: 388 GDQA-ETLPRLL-------------DA--------------PSLENVHSK---------- 409
                +T P+L+             DA               ++EN H K          
Sbjct: 352 EVYTHQTKPKLIPLVHIRHTFSDSNDAFDEIYGKGDENTTEETIEN-HKKYIQDKYSTGD 410

Query: 410 ---SVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIP 449
               V  GA ++A+I   GK++ +G+    + G  +  D++IP
Sbjct: 411 FVEKVGAGAWNSAIITSSGKLYTFGYGDTFRTGNHEENDQDIP 453



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 65/289 (22%), Positives = 107/289 (37%), Gaps = 41/289 (14%)

Query: 100 IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQV 159
           IV   AG  H   V   G++Y++GW         +G L TG+     +  +       Q+
Sbjct: 213 IVSCGAGVMHSSCVDSTGKIYSFGWNR-------YGQLGTGSVKSHTLPAKMKE---TQI 262

Query: 160 SPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
           + +    +   G +       +GE       +S           G       P  +  + 
Sbjct: 263 TSKMHFVKVVCGKNHTLALSNNGE------MVSFGFNACGQLGVGSHLDQINPTKIEFSE 316

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI-------- 271
             ++  +A G  H+L ++D G+ + WGY  +G LGL       + P  IP +        
Sbjct: 317 --KVLDIATGYYHSLCVTDNGEAYSWGYMSDGGLGLSEVYTHQTKPKLIPLVHIRHTFSD 374

Query: 272 -----ESSYGKDRSAALSRGSVNSEG--PGFRVPGNYVKGIACGGRHSAVITDAGALLTF 324
                +  YGK           N +         G++V+ +  G  +SA+IT +G L TF
Sbjct: 375 SNDAFDEIYGKGDENTTEETIENHKKYIQDKYSTGDFVEKVGAGAWNSAIITSSGKLYTF 434

Query: 325 GWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDV 373
           G+G   + G    +D+  P        I IE    GL     I  D D+
Sbjct: 435 GYGDTFRTGNHEENDQDIP--------IIIEQDKWGLERNFNIKEDLDI 475



 Score = 40.4 bits (93), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 44/207 (21%), Positives = 86/207 (41%), Gaps = 36/207 (17%)

Query: 49  VCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWA 108
           VCG      +A+S++ +++++G  +  GQ  V  G H +   P  +     ++  A G+ 
Sbjct: 272 VCGKN--HTLALSNNGEMVSFG-FNACGQLGV--GSHLDQINPTKIEFSEKVLDIATGYY 326

Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRS 168
           H + VT+ GE Y+WG+               G GL  +V+  Q+     ++ P   +  +
Sbjct: 327 HSLCVTDNGEAYSWGYMS-----------DGGLGL-SEVYTHQTK---PKLIPLVHIRHT 371

Query: 169 SGGTSSGTDG-RGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVA 227
              ++   D   G G+E +    I   K+  +   S                G  +  V 
Sbjct: 372 FSDSNDAFDEIYGKGDENTTEETIENHKKYIQDKYS---------------TGDFVEKVG 416

Query: 228 AGGRHTLALSDIGQVWGWGYGGEGQLG 254
           AG  ++  ++  G+++ +GYG   + G
Sbjct: 417 AGAWNSAIITSSGKLYTFGYGDTFRTG 443


>gi|325183095|emb|CCA17552.1| regulator of chromosome condensation (RCC1)like protein putative
           [Albugo laibachii Nc14]
          Length = 545

 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 93/298 (31%), Positives = 152/298 (51%), Gaps = 33/298 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR----- 258
           GD +    P LV      +   ++ G  HT+ L+D G+V+ WG G +G+LG G       
Sbjct: 17  GDTSDQYHPILVEALQDRQTVQISCGSGHTVVLTDDGKVYTWGRGDDGRLGHGDNGWKFV 76

Query: 259 IRMVSSPHPIPCIESSYGKDRSAALS-RGSVNSEGPGFR-------------------VP 298
            R+V         + + G   +AA++  G + + G G                     + 
Sbjct: 77  PRLVEDLRDKKVRQVTCGSYHTAAVTVSGELYTWGGGMYGKLGHGNENGHSTPSLVESIK 136

Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD-DELSPNCVSSLLGIQIEGV 357
           G YV+ +ACG RH+ V+ +   + T+G    G  G G T   + SP CVS L+ I I+ +
Sbjct: 137 GLYVRQVACGSRHTVVLLENQDVYTWGDKENGVSGHGDTSGHQYSPYCVSELVEINIKQI 196

Query: 358 AAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARH 417
           +A  +HT  +S +G V+ FG  +FG+LG   ++ + + + +DA   + +  K V+CG  H
Sbjct: 197 SACGFHTAALSENGQVFTFGEGKFGRLGHNSERNQPVAKCIDALIGKRI--KQVACGGFH 254

Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNV---ACGWWHTLLL 472
           TA + + G VF WG  ++GQLG GD +++ IP++V  E  + +N+    CGW HT+ L
Sbjct: 255 TAAVTESGHVFTWGGGEHGQLGHGDKVNQIIPTRV--ESLIDKNIIQLTCGWSHTVAL 310



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 117/429 (27%), Positives = 181/429 (42%), Gaps = 85/429 (19%)

Query: 66  LITWGSTDD--LGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
           + TWG  +D  LG    +   H  + E      +   V+ + G  H V +T+ G+VYTWG
Sbjct: 3   VYTWGRGEDGQLGLGDTSDQYHPILVEALQ---DRQTVQISCGSGHTVVLTDDGKVYTWG 59

Query: 124 -------------WKECVPSGRVFGDLSTGTGLDKDVFERQS---SFLTEQVSPRSQVSR 167
                        WK  VP  R+  DL      DK V  RQ    S+ T  V+   ++  
Sbjct: 60  RGDDGRLGHGDNGWK-FVP--RLVEDLR-----DKKV--RQVTCGSYHTAAVTVSGELYT 109

Query: 168 SSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVA 227
             GG          G+ G                  G+EN  + P LV    G+ +  VA
Sbjct: 110 WGGGMY--------GKLGH-----------------GNENGHSTPSLVESIKGLYVRQVA 144

Query: 228 AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGS 287
            G RHT+ L +   V+ WG    G  G G       SP+ +  +                
Sbjct: 145 CGSRHTVVLLENQDVYTWGDKENGVSGHGDTSGHQYSPYCVSEL---------------- 188

Query: 288 VNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVS 347
                    V  N +K I+  G H+A +++ G + TFG G +G+ G  S  ++    C+ 
Sbjct: 189 ---------VEIN-IKQISACGFHTAALSENGQVFTFGEGKFGRLGHNSERNQPVAKCID 238

Query: 348 SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVH 407
           +L+G +I+ VA G +HT  ++  G V+ +GG + GQLG G    + +P  +++   +N+ 
Sbjct: 239 ALIGKRIKQVACGGFHTAAVTESGHVFTWGGGEHGQLGHGDKVNQIIPTRVESLIDKNI- 297

Query: 408 SKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGW 466
              ++CG  HT  + D G+VF WG   +G+LG  D      P  + T       +VA   
Sbjct: 298 -IQLTCGWSHTVALTDKGEVFTWGNGDHGKLGHNDTNKVTEPKLIETFNSKRVISVASYN 356

Query: 467 WHTLLLAVP 475
            HT+ L  P
Sbjct: 357 EHTVALVNP 365



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 102/381 (26%), Positives = 162/381 (42%), Gaps = 68/381 (17%)

Query: 53  GCGFAMAISDSRKLITWGSTDD--LGQSYVTSGKHGE-----IPEPFPLPTEASIVKAAA 105
           G G  + ++D  K+ TWG  DD  LG        HG+     +P       +  + +   
Sbjct: 42  GSGHTVVLTDDGKVYTWGRGDDGRLG--------HGDNGWKFVPRLVEDLRDKKVRQVTC 93

Query: 106 GWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS--PRS 163
           G  H  AVT  GE+YTWG       G ++G L  G     +     +  L E +      
Sbjct: 94  GSYHTAAVTVSGELYTWG-------GGMYGKLGHG-----NENGHSTPSLVESIKGLYVR 141

Query: 164 QVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRI 223
           QV+  S  T    + +     G K   +S    T+    S        P  V+    + I
Sbjct: 142 QVACGSRHTVVLLENQDVYTWGDKENGVSGHGDTSGHQYS--------PYCVSELVEINI 193

Query: 224 ATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI-PCIESSYGKDRSAA 282
             ++A G HT ALS+ GQV+ +G G  G+LG  S         P+  CI++  GK     
Sbjct: 194 KQISACGFHTAALSENGQVFTFGEGKFGRLGHNS-----ERNQPVAKCIDALIGKR---- 244

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                              +K +ACGG H+A +T++G + T+G G +GQ G G   +++ 
Sbjct: 245 -------------------IKQVACGGFHTAAVTESGHVFTWGGGEHGQLGHGDKVNQII 285

Query: 343 PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPS 402
           P  V SL+   I  +  G  HT+ ++  G+V+ +G    G+LG       T P+L++  +
Sbjct: 286 PTRVESLIDKNIIQLTCGWSHTVALTDKGEVFTWGNGDHGKLGHNDTNKVTEPKLIETFN 345

Query: 403 LENVHSKSVSCGARHTAVIAD 423
            + V   SV+    HT  + +
Sbjct: 346 SKRV--ISVASYNEHTVALVN 364



 Score = 45.4 bits (106), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 22/112 (19%)

Query: 22  GALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVT 81
           G L   S    P+   +   +G   + V  GG   A A+++S  + TWG           
Sbjct: 221 GRLGHNSERNQPVAKCIDALIGKRIKQVACGGFHTA-AVTESGHVFTWGG---------- 269

Query: 82  SGKHGE----------IPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
            G+HG+          IP       + +I++   GW+H VA+T+ GEV+TWG
Sbjct: 270 -GEHGQLGHGDKVNQIIPTRVESLIDKNIIQLTCGWSHTVALTDKGEVFTWG 320


>gi|356516391|ref|XP_003526878.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 440

 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 122/409 (29%), Positives = 183/409 (44%), Gaps = 66/409 (16%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKA------AAG 106
           G    +A+     + +WG  +D GQ       HG+  +   LPT  S + A      A G
Sbjct: 21  GASHTVALLSGNVVCSWGRGED-GQL-----GHGDTDDRL-LPTHLSALDAQQIDSIACG 73

Query: 107 WAHCVAVTEG-GEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQV 165
             H +A +E   E+Y+WGW +       FG L  G G   D+   Q     + +    ++
Sbjct: 74  ADHTLAYSESRNELYSWGWGD-------FGRL--GHGNSSDLLIPQPIIALQGL----RI 120

Query: 166 SRSSGGTSSGTDGRGSGEEGS--KRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRI 223
            + + G S        GE  S  + +   L   T+E S          P  +    GV I
Sbjct: 121 KQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTSEDS--------LVPQKIQTFQGVPI 172

Query: 224 ATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAAL 283
             VAAG  H++A+++ G+++GWG+G  G LGLG R     +   IP   SS   D+    
Sbjct: 173 KMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDR-----NDRWIPEKVSSVDCDKMVM- 226

Query: 284 SRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                                +ACG RH+  ++  G L T+GW  YGQ G G+ +D L P
Sbjct: 227 ---------------------VACGWRHTISVSSLGGLYTYGWSKYGQLGHGNFEDSLVP 265

Query: 344 NCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSL 403
             + +L    I  V+ G  H++ ++S G +Y +G N+FGQ+G G +     P  +  P  
Sbjct: 266 QKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQVGVGDNVDRCSPVQVKFPHD 325

Query: 404 ENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
           + V    +SCG RHT  + +   VF WG    GQLG GD +DRN P  +
Sbjct: 326 QKV--VQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTVDRNSPKII 372



 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 93/295 (31%), Positives = 148/295 (50%), Gaps = 31/295 (10%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDI-GQVWGWGYGGEGQLGLGSRIRMV 262
           GD +    P  ++     +I ++A G  HTLA S+   +++ WG+G  G+LG G+   ++
Sbjct: 48  GDTDDRLLPTHLSALDAQQIDSIACGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLL 107

Query: 263 SSPHPIPCIE-----------------------SSYGKDRSAALSRGSVNSEGPGFRVP- 298
             P PI  ++                        S+G++++  L  G+        ++  
Sbjct: 108 I-PQPIIALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQT 166

Query: 299 --GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG 356
             G  +K +A G  HS  IT+ G L  +GWG YG  G G  +D   P  VSS+   ++  
Sbjct: 167 FQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMVM 226

Query: 357 VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR 416
           VA G  HTI +SS G +Y +G +++GQLG G  +   +P+ L A S + +    VS G R
Sbjct: 227 VACGWRHTISVSSLGGLYTYGWSKYGQLGHGNFEDSLVPQKLQALSDKLI--SQVSGGWR 284

Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACGWWHTL 470
           H+  +   G ++ WGWNK+GQ+G+GD +DR  P QV          ++CGW HT+
Sbjct: 285 HSMALTSTGLLYGWGWNKFGQVGVGDNVDRCSPVQVKFPHDQKVVQISCGWRHTI 339



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 101/227 (44%), Gaps = 56/227 (24%)

Query: 298 PGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGV 357
           P + V  I+ G  H+  +     + ++G G  GQ G G TDD L P  +S+L   QI+ +
Sbjct: 11  PPSRVLLISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRLLPTHLSALDAQQIDSI 70

Query: 358 AAGLWHT----------------------------------------------------- 364
           A G  HT                                                     
Sbjct: 71  ACGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIACGDSHC 130

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           + ++ +G+V ++G NQ GQLG G  +   +P+ +   + + V  K V+ GA H+  I ++
Sbjct: 131 LAVTMEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQ--TFQGVPIKMVAAGAEHSVAITEN 188

Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPR-NVACGWWHTL 470
           G+++ WGW +YG LGLGD  DR IP +V+   C     VACGW HT+
Sbjct: 189 GELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMVMVACGWRHTI 235


>gi|255638076|gb|ACU19352.1| unknown [Glycine max]
          Length = 440

 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 122/409 (29%), Positives = 183/409 (44%), Gaps = 66/409 (16%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKA------AAG 106
           G    +A+     + +WG  +D GQ       HG+  +   LPT  S + A      A G
Sbjct: 21  GASHTVALLSGNVVCSWGRGED-GQL-----GHGDTDDRL-LPTHLSALDAQQIDSIACG 73

Query: 107 WAHCVAVTEG-GEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQV 165
             H +A +E   E+Y+WGW +       FG L  G G   D+   Q     + +    ++
Sbjct: 74  ADHTLAYSESRNELYSWGWGD-------FGRL--GHGNSSDLLIPQPIIALQGL----RI 120

Query: 166 SRSSGGTSSGTDGRGSGEEGS--KRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRI 223
            + + G S        GE  S  + +   L   T+E S          P  +    GV I
Sbjct: 121 KQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTSEDS--------LVPQKIQTFQGVPI 172

Query: 224 ATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAAL 283
             VAAG  H++A+++ G+++GWG+G  G LGLG R     +   IP   SS   D+    
Sbjct: 173 KMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDR-----NDRWIPEKVSSVDCDKMVM- 226

Query: 284 SRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                                +ACG RH+  ++  G L T+GW  YGQ G G+ +D L P
Sbjct: 227 ---------------------VACGWRHTISVSSLGGLYTYGWSKYGQLGHGNFEDSLVP 265

Query: 344 NCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSL 403
             + +L    I  V+ G  H++ ++S G +Y +G N+FGQ+G G +     P  +  P  
Sbjct: 266 QKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQVGVGDNVDRCSPVQVKFPHD 325

Query: 404 ENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
           + V    +SCG RHT  + +   VF WG    GQLG GD +DRN P  +
Sbjct: 326 QKV--VQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTVDRNSPKII 372



 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 93/295 (31%), Positives = 148/295 (50%), Gaps = 31/295 (10%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDI-GQVWGWGYGGEGQLGLGSRIRMV 262
           GD +    P  ++     +I ++A G  HTLA S+   +++ WG+G  G+LG G+   ++
Sbjct: 48  GDTDDRLLPTHLSALDAQQIDSIACGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLL 107

Query: 263 SSPHPIPCIE-----------------------SSYGKDRSAALSRGSVNSEGPGFRVP- 298
             P PI  ++                        S+G++++  L  G+        ++  
Sbjct: 108 I-PQPIIALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQT 166

Query: 299 --GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG 356
             G  +K +A G  HS  IT+ G L  +GWG YG  G G  +D   P  VSS+   ++  
Sbjct: 167 FQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMVM 226

Query: 357 VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR 416
           VA G  HTI +SS G +Y +G +++GQLG G  +   +P+ L A S + +    VS G R
Sbjct: 227 VACGWRHTISVSSLGGLYTYGWSKYGQLGHGNFEDSLVPQKLQALSDKLI--SQVSGGWR 284

Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACGWWHTL 470
           H+  +   G ++ WGWNK+GQ+G+GD +DR  P QV          ++CGW HT+
Sbjct: 285 HSMALTSTGLLYGWGWNKFGQVGVGDNVDRCSPVQVKFPHDQKVVQISCGWRHTI 339



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 101/227 (44%), Gaps = 56/227 (24%)

Query: 298 PGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGV 357
           P + V  I+ G  H+  +     + ++G G  GQ G G TDD L P  +S+L   QI+ +
Sbjct: 11  PPSRVLLISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRLLPTHLSALDAQQIDSI 70

Query: 358 AAGLWHT----------------------------------------------------- 364
           A G  HT                                                     
Sbjct: 71  ACGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIACGDSHC 130

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           + ++ +G+V ++G NQ GQLG G  +   +P+ +   + + V  K V+ GA H+  I ++
Sbjct: 131 LAVTMEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQ--TFQGVPIKMVAAGAEHSVAITEN 188

Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPR-NVACGWWHTL 470
           G+++ WGW +YG LGLGD  DR IP +V+   C     VACGW HT+
Sbjct: 189 GELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMVMVACGWRHTI 235


>gi|302855419|ref|XP_002959204.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
           nagariensis]
 gi|300255434|gb|EFJ39741.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
           nagariensis]
          Length = 367

 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 108/303 (35%), Positives = 151/303 (49%), Gaps = 45/303 (14%)

Query: 196 QTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGL 255
           +TAE+ SS +E            PGV    V+ G  H++A+   G V  WG G +GQLG 
Sbjct: 2   ETAEARSSEEE------------PGV--TAVSCGSSHSVAILSCGIVTSWGRGEDGQLGH 47

Query: 256 GSRIRMVSSPHPIPCIESS------YGKDRSAAL--SRGSVNSEGPG------------F 295
           G     ++ P  I  +  +       G + + A+  SRG V S G G             
Sbjct: 48  GQADECLA-PKAISTLTDAGIESVVCGAEYTIAVAPSRGQVYSWGWGDFGRLGHGDCNDV 106

Query: 296 RVP-------GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS 348
            VP       G  V  +ACG  H+ V+   G L TFG    GQ G G T+D LSP  V +
Sbjct: 107 FVPRPIEFFSGRPVHRVACGDTHTLVVAGEGELFTFGRNQNGQLGLGHTNDCLSPQLVVA 166

Query: 349 LLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHS 408
           L G ++  VA G  H++  +  G V+++G  ++G LG G  Q   LP  +    LE +  
Sbjct: 167 LQGERVRSVACGSEHSLAATESGTVFSWGWGRYGNLGDGESQDRYLPTRV--VGLEGIRM 224

Query: 409 KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWW 467
            S  CG RH+AV+++DG+VF +GW+KYGQLG GD  DR +P QV  +      +VA GW 
Sbjct: 225 VSAECGWRHSAVVSEDGRVFTFGWSKYGQLGHGDHTDRTVPCQVAALRHTRISSVAGGWR 284

Query: 468 HTL 470
           HT+
Sbjct: 285 HTM 287



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 98/299 (32%), Positives = 142/299 (47%), Gaps = 38/299 (12%)

Query: 205 DENLSAFPCLVTLNPGVRIATVAAGGRHTLALS-DIGQVWGWGYGGEGQLGLGSRIRMVS 263
           DE L+  P  ++      I +V  G  +T+A++   GQV+ WG+G  G+LG G     V 
Sbjct: 51  DECLA--PKAISTLTDAGIESVVCGAEYTIAVAPSRGQVYSWGWGDFGRLGHGD-CNDVF 107

Query: 264 SPHPIPCIES-----------------------SYGKDRSAALSRGSVNS-EGPGFRVP- 298
            P PI                            ++G++++  L  G  N    P   V  
Sbjct: 108 VPRPIEFFSGRPVHRVACGDTHTLVVAGEGELFTFGRNQNGQLGLGHTNDCLSPQLVVAL 167

Query: 299 -GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGV 357
            G  V+ +ACG  HS   T++G + ++GWG YG  G G + D   P  V  L GI++   
Sbjct: 168 QGERVRSVACGSEHSLAATESGTVFSWGWGRYGNLGDGESQDRYLPTRVVGLEGIRMVSA 227

Query: 358 AAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARH 417
             G  H+  +S DG V+ FG +++GQLG G     T+P      +L +    SV+ G RH
Sbjct: 228 ECGWRHSAVVSEDGRVFTFGWSKYGQLGHGDHTDRTVP--CQVAALRHTRISSVAGGWRH 285

Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRN----VACGWWHTLLL 472
           T      G ++ WGWNK+GQLGLGD  DR  PS V + G +       V CGW HT+ +
Sbjct: 286 TMAADSSGNLYGWGWNKFGQLGLGDSSDR--PSPVLVGGALAGQRVSLVTCGWRHTVAV 342



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 120/395 (30%), Positives = 168/395 (42%), Gaps = 51/395 (12%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
           G   ++AI     + +WG  +D GQ           P+     T+A I     G  + +A
Sbjct: 21  GSSHSVAILSCGIVTSWGRGED-GQLGHGQADECLAPKAISTLTDAGIESVVCGAEYTIA 79

Query: 113 VTEG-GEVYTWGWKECVPSGRVFGDLSTGTGLDKDVF-ERQSSFLTEQVSPRSQVSRSSG 170
           V    G+VY+WGW +       FG L  G G   DVF  R   F + +      V R + 
Sbjct: 80  VAPSRGQVYSWGWGD-------FGRL--GHGDCNDVFVPRPIEFFSGR-----PVHRVAC 125

Query: 171 GTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGG 230
           G +      G GE        +  +        G  N    P LV    G R+ +VA G 
Sbjct: 126 GDTHTLVVAGEGE------LFTFGRNQNGQLGLGHTNDCLSPQLVVALQGERVRSVACGS 179

Query: 231 RHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNS 290
            H+LA ++ G V+ WG+G  G LG G               +  Y   R   L       
Sbjct: 180 EHSLAATESGTVFSWGWGRYGNLGDGES-------------QDRYLPTRVVGLE------ 220

Query: 291 EGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLL 350
                   G  +    CG RHSAV+++ G + TFGW  YGQ G G   D   P  V++L 
Sbjct: 221 --------GIRMVSAECGWRHSAVVSEDGRVFTFGWSKYGQLGHGDHTDRTVPCQVAALR 272

Query: 351 GIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
             +I  VA G  HT+   S G++Y +G N+FGQLG G D ++    +L   +L       
Sbjct: 273 HTRISSVAGGWRHTMAADSSGNLYGWGWNKFGQLGLG-DSSDRPSPVLVGGALAGQRVSL 331

Query: 411 VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVID 445
           V+CG RHT  + + G+V+ WG    GQLG G   D
Sbjct: 332 VTCGWRHTVAVTEGGRVYSWGRGVNGQLGHGAEQD 366


>gi|159488564|ref|XP_001702277.1| hypothetical protein CHLREDRAFT_122886 [Chlamydomonas reinhardtii]
 gi|158271254|gb|EDO97078.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 376

 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 103/278 (37%), Positives = 144/278 (51%), Gaps = 32/278 (11%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESS------Y 275
           R+  V+ G  H++AL D G V  WG G +GQLG G +    +SP  I  +  +       
Sbjct: 11  RVLGVSCGSSHSIALLDCGVVASWGRGEDGQLGHG-QADQCTSPTCIAALTDAGVDAVVC 69

Query: 276 GKDRSAAL--SRGSVNSEGPG------------FRVP-------GNYVKGIACGGRHSAV 314
           G + + A+  SRG + S G G              VP       G  V  +ACG  H+ V
Sbjct: 70  GAEYTVAVASSRGQIYSWGWGDFGRLGHGECGDVFVPRPIAFFSGRPVARVACGDTHTLV 129

Query: 315 ITDA-GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDV 373
           +T   GAL TFG    GQ G G T+D LSP  V++L G ++  VA G  H++  +  G V
Sbjct: 130 VTQGDGALYTFGRNQNGQLGLGHTNDCLSPQLVTALQGERVSSVACGSEHSLAATEAGTV 189

Query: 374 YAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWN 433
           +++G  ++G LG G  Q    P  +    L+ V   SV CG RH+AV+ D+G+VF +GW+
Sbjct: 190 FSWGWGRYGNLGDGDSQDRYTPTRV--VGLDGVTVTSVVCGWRHSAVVTDEGRVFTFGWS 247

Query: 434 KYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
           KYGQLG GD +D   P  V  ++ C    VA GW HT+
Sbjct: 248 KYGQLGHGDHVDHTRPCLVAGLQHCRVSTVAGGWRHTM 285



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 123/407 (30%), Positives = 176/407 (43%), Gaps = 61/407 (14%)

Query: 49  VCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAG 106
           V G  CG   ++A+ D   + +WG  +D GQ           P      T+A +     G
Sbjct: 12  VLGVSCGSSHSIALLDCGVVASWGRGED-GQLGHGQADQCTSPTCIAALTDAGVDAVVCG 70

Query: 107 WAHCVAVTEG-GEVYTWGWKECVPSGRVFGDLSTGTGLDKDVF-ERQSSFLTEQVSPRSQ 164
             + VAV    G++Y+WGW +       FG L  G G   DVF  R  +F + +  P ++
Sbjct: 71  AEYTVAVASSRGQIYSWGWGD-------FGRL--GHGECGDVFVPRPIAFFSGR--PVAR 119

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           V+     T   T G G+          +  +        G  N    P LVT   G R++
Sbjct: 120 VACGDTHTLVVTQGDGA--------LYTFGRNQNGQLGLGHTNDCLSPQLVTALQGERVS 171

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
           +VA G  H+LA ++ G V+ WG+G  G LG G               +  Y   R   L 
Sbjct: 172 SVACGSEHSLAATEAGTVFSWGWGRYGNLGDGDS-------------QDRYTPTRVVGLD 218

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN 344
                         G  V  + CG RHSAV+TD G + TFGW  YGQ G G   D   P 
Sbjct: 219 --------------GVTVTSVVCGWRHSAVVTDEGRVFTFGWSKYGQLGHGDHVDHTRPC 264

Query: 345 CVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLE 404
            V+ L   ++  VA G  HT+   S+G++YA+G N+FGQLG G  +    P  +    L 
Sbjct: 265 LVAGLQHCRVSTVAGGWRHTMAADSEGNLYAWGWNKFGQLGLGDSEDRAAPTPVAGFGLA 324

Query: 405 NVHSKS----------VSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
               ++          ++CG RHT  + + G+V+ WG    GQLG G
Sbjct: 325 GGGVEAGAATPRRVALLACGWRHTVAVTEAGEVYSWGRGVNGQLGHG 371



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 92/291 (31%), Positives = 136/291 (46%), Gaps = 44/291 (15%)

Query: 223 IATVAAGGRHTLAL-SDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES-------- 273
           +  V  G  +T+A+ S  GQ++ WG+G  G+LG G     V  P PI             
Sbjct: 64  VDAVVCGAEYTVAVASSRGQIYSWGWGDFGRLGHG-ECGDVFVPRPIAFFSGRPVARVAC 122

Query: 274 ----------------SYGKDRSAALSRGSVN---SEGPGFRVPGNYVKGIACGGRHSAV 314
                           ++G++++  L  G  N   S      + G  V  +ACG  HS  
Sbjct: 123 GDTHTLVVTQGDGALYTFGRNQNGQLGLGHTNDCLSPQLVTALQGERVSSVACGSEHSLA 182

Query: 315 ITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVY 374
            T+AG + ++GWG YG  G G + D  +P  V  L G+ +  V  G  H+  ++ +G V+
Sbjct: 183 ATEAGTVFSWGWGRYGNLGDGDSQDRYTPTRVVGLDGVTVTSVVCGWRHSAVVTDEGRVF 242

Query: 375 AFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNK 434
            FG +++GQLG G     T P L+    L++    +V+ G RHT     +G ++ WGWNK
Sbjct: 243 TFGWSKYGQLGHGDHVDHTRPCLV--AGLQHCRVSTVAGGWRHTMAADSEGNLYAWGWNK 300

Query: 435 YGQLGLGDVIDRNIPSQVT----------IEGCVPRNV---ACGWWHTLLL 472
           +GQLGLGD  DR  P+ V                PR V   ACGW HT+ +
Sbjct: 301 FGQLGLGDSEDRAAPTPVAGFGLAGGGVEAGAATPRRVALLACGWRHTVAV 351



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 98/240 (40%), Gaps = 34/240 (14%)

Query: 100 IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQV 159
           +   A G  H +A TE G V++WGW      GR +G+L  G   D+    R        V
Sbjct: 170 VSSVACGSEHSLAATEAGTVFSWGW------GR-YGNLGDGDSQDRYTPTRVVGLDGVTV 222

Query: 160 SPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
                       TS     R S     + R  +           GD      PCLV    
Sbjct: 223 ------------TSVVCGWRHSAVVTDEGRVFTFGWSKYGQLGHGDHVDHTRPCLVAGLQ 270

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
             R++TVA G RHT+A    G ++ WG+   GQLGLG      ++P P+     + G   
Sbjct: 271 HCRVSTVAGGWRHTMAADSEGNLYAWGWNKFGQLGLGDSEDR-AAPTPVAGFGLAGGGVE 329

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDD 339
           + A +                 V  +ACG RH+  +T+AG + ++G G+ GQ G G+  D
Sbjct: 330 AGAATP--------------RRVALLACGWRHTVAVTEAGEVYSWGRGVNGQLGHGAEQD 375


>gi|387193358|gb|AFJ68699.1| hypothetical protein NGATSA_3056200, partial [Nannochloropsis
           gaditana CCMP526]
          Length = 511

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/279 (34%), Positives = 139/279 (49%), Gaps = 38/279 (13%)

Query: 205 DENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSS 264
           D +    P LV+   G  I  V  G  HT A+SD G +W WG G  G+LG G+ +     
Sbjct: 75  DNHWKYVPHLVSALTGKSIKQVTCGSYHTAAISDTGALWTWGGGMYGKLGHGNEV----- 129

Query: 265 PHPIPC-IESSYGKD----------RSAALSRGSVNSEGPGFR----------------- 296
            HP PC +E+  G++           +A L+ G V   G                     
Sbjct: 130 GHPAPCRVEAFIGREVEQIACGSRHTAALLAGGEVYCWGDRENGVCGIGEAAEHQYLPKK 189

Query: 297 ---VPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ 353
              + G  +  IA  G H+A IT  GAL ++G G +G+ GQG+  ++++P CV  L G++
Sbjct: 190 LEALKGVKITQIAACGFHTAAITQDGALWSWGEGKFGRLGQGNEKNQVTPCCVEGLQGVR 249

Query: 354 IEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSC 413
           ++ VA G +H+ C++ DGDV  FGG + GQLG G     T+P L+ A  LE      V+C
Sbjct: 250 VKQVACGGFHSACVTEDGDVLTFGGGEHGQLGHGDKTNRTVPCLVKA--LEGAGIVQVTC 307

Query: 414 GARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
           G  HT  +++DGKVF +G   +G+LG G      +P  V
Sbjct: 308 GWSHTVTLSEDGKVFTFGNGDHGKLGHGANAKSALPKLV 346



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 106/372 (28%), Positives = 161/372 (43%), Gaps = 54/372 (14%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
           G G  + +++ + + +WG  DD G+          +P      T  SI +   G  H  A
Sbjct: 47  GSGHTVVLTEDKDVWSWGRGDD-GRLGHADNHWKYVPHLVSALTGKSIKQVTCGSYHTAA 105

Query: 113 VTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGT 172
           +++ G ++TWG       G ++G L  G  +      R  +F+  +V   +  SR +   
Sbjct: 106 ISDTGALWTWG-------GGMYGKLGHGNEVGHPAPCRVEAFIGREVEQIACGSRHTAAL 158

Query: 173 SSGTDGRGSGEE---GSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAG 229
            +G      GE    G +   +    + AE            P  +    GV+I  +AA 
Sbjct: 159 LAG------GEVYCWGDRENGVCGIGEAAEHQY--------LPKKLEALKGVKITQIAAC 204

Query: 230 GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVN 289
           G HT A++  G +W WG G  G+LG G+    V+     PC                   
Sbjct: 205 GFHTAAITQDGALWSWGEGKFGRLGQGNEKNQVT-----PCC------------------ 241

Query: 290 SEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSL 349
            EG    + G  VK +ACGG HSA +T+ G +LTFG G +GQ G G   +   P  V +L
Sbjct: 242 VEG----LQGVRVKQVACGGFHSACVTEDGDVLTFGGGEHGQLGHGDKTNRTVPCLVKAL 297

Query: 350 LGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSK 409
            G  I  V  G  HT+ +S DG V+ FG    G+LG G +    LP+L++  SL N+   
Sbjct: 298 EGAGIVQVTCGWSHTVTLSEDGKVFTFGNGDHGKLGHGANAKSALPKLVE--SLANMKVA 355

Query: 410 SVSCGARHTAVI 421
            V+    HT  +
Sbjct: 356 KVASYNEHTVAL 367



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 85/325 (26%), Positives = 137/325 (42%), Gaps = 83/325 (25%)

Query: 203 SGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMV 262
           +G  N    P  V     + +  +A G  HT+ L++   VW WG G +G+LG        
Sbjct: 21  NGSTNDQEMPMPVEGLKHLTVVQIACGSGHTVVLTEDKDVWSWGRGDDGRLGHADN-HWK 79

Query: 263 SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL 322
             PH +  +                           G  +K + CG  H+A I+D GAL 
Sbjct: 80  YVPHLVSAL--------------------------TGKSIKQVTCGSYHTAAISDTGALW 113

Query: 323 TFGWGLYGQCGQG----------------------------------------------- 335
           T+G G+YG+ G G                                               
Sbjct: 114 TWGGGMYGKLGHGNEVGHPAPCRVEAFIGREVEQIACGSRHTAALLAGGEVYCWGDRENG 173

Query: 336 ------STDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD 389
                 + + +  P  + +L G++I  +AA  +HT  I+ DG ++++G  +FG+LG G +
Sbjct: 174 VCGIGEAAEHQYLPKKLEALKGVKITQIAACGFHTAAITQDGALWSWGEGKFGRLGQGNE 233

Query: 390 QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIP 449
           + +  P  ++   L+ V  K V+CG  H+A + +DG V  +G  ++GQLG GD  +R +P
Sbjct: 234 KNQVTPCCVEG--LQGVRVKQVACGGFHSACVTEDGDVLTFGGGEHGQLGHGDKTNRTVP 291

Query: 450 SQV-TIEGCVPRNVACGWWHTLLLA 473
             V  +EG     V CGW HT+ L+
Sbjct: 292 CLVKALEGAGIVQVTCGWSHTVTLS 316



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/155 (36%), Positives = 88/155 (56%), Gaps = 7/155 (4%)

Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
           L ++G G  GQCG GST+D+  P  V  L  + +  +A G  HT+ ++ D DV+++G   
Sbjct: 8   LYSWGRGEDGQCGNGSTNDQEMPMPVEGLKHLTVVQIACGSGHTVVLTEDKDVWSWGRGD 67

Query: 381 FGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL 440
            G+LG   +  + +P L+ A + +++  K V+CG+ HTA I+D G ++ WG   YG+LG 
Sbjct: 68  DGRLGHADNHWKYVPHLVSALTGKSI--KQVTCGSYHTAAISDTGALWTWGGGMYGKLGH 125

Query: 441 GDVIDRNIPSQVTIEGCVPRNV---ACGWWHTLLL 472
           G+ +    P +V  E  + R V   ACG  HT  L
Sbjct: 126 GNEVGHPAPCRV--EAFIGREVEQIACGSRHTAAL 158



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 101/201 (50%), Gaps = 7/201 (3%)

Query: 274 SYGKDRSAALSRGSVNSEGPGFRVPGNY---VKGIACGGRHSAVITDAGALLTFGWGLYG 330
           S+G+        GS N +     V G     V  IACG  H+ V+T+   + ++G G  G
Sbjct: 10  SWGRGEDGQCGNGSTNDQEMPMPVEGLKHLTVVQIACGSGHTVVLTEDKDVWSWGRGDDG 69

Query: 331 QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
           + G      +  P+ VS+L G  I+ V  G +HT  IS  G ++ +GG  +G+LG G + 
Sbjct: 70  RLGHADNHWKYVPHLVSALTGKSIKQVTCGSYHTAAISDTGALWTWGGGMYGKLGHGNEV 129

Query: 391 AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN-IP 449
               P  ++A     V  + ++CG+RHTA +   G+V+CWG  + G  G+G+  +   +P
Sbjct: 130 GHPAPCRVEAFIGREV--EQIACGSRHTAALLAGGEVYCWGDRENGVCGIGEAAEHQYLP 187

Query: 450 SQV-TIEGCVPRNVACGWWHT 469
            ++  ++G     +A   +HT
Sbjct: 188 KKLEALKGVKITQIAACGFHT 208


>gi|348688462|gb|EGZ28276.1| hypothetical protein PHYSODRAFT_476799 [Phytophthora sojae]
          Length = 1699

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 123/254 (48%), Gaps = 30/254 (11%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           V+    + G  H +AL+D G  + WGY   GQLG  +    +  P  I  +     KD+ 
Sbjct: 416 VKFIAASNGCEHMIALTDTGLAYSWGYNDRGQLGHENLATKIHVPKLIESL-----KDKK 470

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
              +  S +                     HSAVITDAG L TFG    GQ G   T  +
Sbjct: 471 LGFASVSYH---------------------HSAVITDAGELYTFGMNDCGQLGLDHTQHQ 509

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
            +P  V SL   ++  VA GL+HTI  ++ G+++  G N +GQLG   ++   LP L+  
Sbjct: 510 STPQLVKSLEATEVSMVACGLYHTIICTAAGELFTCGKNDYGQLGLAHNRQIKLPTLVAL 569

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPR 460
           P   N     V+CG  H+ V++  G+ F +G N YGQLG+G  + +N+P+ V +      
Sbjct: 570 P---NEMVSFVACGYYHSVVVSTGGRAFSFGRNDYGQLGIGSKVHQNVPNVVALSSNTRM 626

Query: 461 -NVACGWWHTLLLA 473
               CG +HT+LL+
Sbjct: 627 VRATCGCYHTVLLS 640



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 85/339 (25%), Positives = 126/339 (37%), Gaps = 55/339 (16%)

Query: 98  ASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFL-T 156
              + A+ G  H +A+T+ G  Y+WG+ +    G    +L+T   + K +   +   L  
Sbjct: 416 VKFIAASNGCEHMIALTDTGLAYSWGYNDRGQLGH--ENLATKIHVPKLIESLKDKKLGF 473

Query: 157 EQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVT 216
             VS       +  G          G+ G           T   S+         P LV 
Sbjct: 474 ASVSYHHSAVITDAGELYTFGMNDCGQLG--------LDHTQHQST---------PQLVK 516

Query: 217 LNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYG 276
                 ++ VA G  HT+  +  G+++  G    GQLGL    R +  P  +        
Sbjct: 517 SLEATEVSMVACGLYHTIICTAAGELFTCGKNDYGQLGLAHN-RQIKLPTLVA------- 568

Query: 277 KDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGS 336
                               +P   V  +ACG  HS V++  G   +FG   YGQ G GS
Sbjct: 569 --------------------LPNEMVSFVACGYYHSVVVSTGGRAFSFGRNDYGQLGIGS 608

Query: 337 TDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPR 396
              +  PN V+     ++     G +HT+ +S  G VY FG N  GQLG  G     LP 
Sbjct: 609 KVHQNVPNVVALSSNTRMVRATCGCYHTVLLSEQGQVYVFGRNNKGQLGNRGSADALLPV 668

Query: 397 LLDA-PSLENVHSKSVSCGARHTAVIA------DDGKVF 428
            L   P   +     V+ G   T++I       DDG V 
Sbjct: 669 PLKVRPEKNSRRCVDVAAGFYTTSLIVERKRENDDGDVI 707



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 80/337 (23%), Positives = 132/337 (39%), Gaps = 68/337 (20%)

Query: 52  GGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAH 109
            GC   +A++D+    +WG  D   LG   + +  H  +P+      +  +  A+  + H
Sbjct: 423 NGCEHMIALTDTGLAYSWGYNDRGQLGHENLATKIH--VPKLIESLKDKKLGFASVSYHH 480

Query: 110 CVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSS 169
              +T+ GE+YT+G  +C       G L    GLD    + QS+    +    ++VS  +
Sbjct: 481 SAVITDAGELYTFGMNDC-------GQL----GLDHT--QHQSTPQLVKSLEATEVSMVA 527

Query: 170 GGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAG 229
            G         +GE        +  K                P LV L P   ++ VA G
Sbjct: 528 CGLYHTIICTAAGE------LFTCGKNDYGQLGLAHNRQIKLPTLVAL-PNEMVSFVACG 580

Query: 230 GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVN 289
             H++ +S  G+ + +G    GQLG+GS++        +P +          ALS  +  
Sbjct: 581 YYHSVVVSTGGRAFSFGRNDYGQLGIGSKVH-----QNVPNV---------VALSSNT-- 624

Query: 290 SEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSL 349
                       V+   CG  H+ ++++ G +  FG    GQ G   + D L P      
Sbjct: 625 ----------RMVRA-TCGCYHTVLLSEQGQVYVFGRNNKGQLGNRGSADALLP----VP 669

Query: 350 LGIQIE-------GVAAGLWHTICI------SSDGDV 373
           L ++ E        VAAG + T  I      + DGDV
Sbjct: 670 LKVRPEKNSRRCVDVAAGFYTTSLIVERKRENDDGDV 706



 Score = 40.8 bits (94), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 3/90 (3%)

Query: 36  VRLPLTVGSAWRDVCGGGCGF--AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFP 93
           ++LP  V      V    CG+  ++ +S   +  ++G  +D GQ  + S  H  +P    
Sbjct: 561 IKLPTLVALPNEMVSFVACGYYHSVVVSTGGRAFSFGR-NDYGQLGIGSKVHQNVPNVVA 619

Query: 94  LPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
           L +   +V+A  G  H V ++E G+VY +G
Sbjct: 620 LSSNTRMVRATCGCYHTVLLSEQGQVYVFG 649


>gi|357464765|ref|XP_003602664.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|358348400|ref|XP_003638235.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355491712|gb|AES72915.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355504170|gb|AES85373.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 439

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 112/378 (29%), Positives = 169/378 (44%), Gaps = 63/378 (16%)

Query: 85  HGEIPEPFPLPTEAS------IVKAAAGWAHCVAVTEGG-EVYTWGWKECVPSGRVFGDL 137
           HG+  +   LPT+ S      IV    G  H +A +E   EVY+WGW +       FG L
Sbjct: 49  HGDTDDRL-LPTQLSALDAQQIVSVVCGADHTLAYSESKVEVYSWGWGD-------FGRL 100

Query: 138 STGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGS--KRRRISLAK 195
             G G   D+F  Q     + +    ++ + + G S        GE  S  + +   L  
Sbjct: 101 --GHGNSSDLFIPQPIRALQGL----RIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGL 154

Query: 196 QTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGL 255
            T E S          P  +    GV I  VAAG  H++A+++ G+++GWG+G  G LGL
Sbjct: 155 GTTEDS--------LVPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGL 206

Query: 256 GSR-IRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAV 314
           G R  R +     + C                             + +  +ACG RH+  
Sbjct: 207 GDRNDRCIPEKVSVDC-----------------------------DKMVLVACGWRHTIS 237

Query: 315 ITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVY 374
           ++ +G L T+GW  YGQ G G   D L P+ + +     I  V+ G  HT+ +++ G +Y
Sbjct: 238 VSSSGELYTYGWSKYGQLGHGDCKDHLVPHKLQAFSDKLICQVSGGWRHTMALTTGGQLY 297

Query: 375 AFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNK 434
            +G N+FGQ+G G +     P  +  P  + V    +SCG RHT  + +   V+ WG   
Sbjct: 298 GWGWNKFGQVGVGDNVDRCSPVQVKFPHDQKV--AQISCGWRHTIAVTEKDNVYSWGRGT 355

Query: 435 YGQLGLGDVIDRNIPSQV 452
            GQLG+GD ID N P  +
Sbjct: 356 NGQLGIGDTIDWNYPKII 373



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 94/295 (31%), Positives = 144/295 (48%), Gaps = 32/295 (10%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIG-QVWGWGYGGEGQLGLGSRIRMV 262
           GD +    P  ++     +I +V  G  HTLA S+   +V+ WG+G  G+LG G+   + 
Sbjct: 50  GDTDDRLLPTQLSALDAQQIVSVVCGADHTLAYSESKVEVYSWGWGDFGRLGHGNSSDLF 109

Query: 263 SSPHPIPCIE-----------------------SSYGKDRSAALSRGSVNSEGPGFRVP- 298
             P PI  ++                        S+G++++  L  G+        ++  
Sbjct: 110 I-PQPIRALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQT 168

Query: 299 --GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG 356
             G  +K +A G  HS  IT+ G L  +GWG YG  G G  +D   P  VS      +  
Sbjct: 169 FQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRCIPEKVSVDCDKMVL- 227

Query: 357 VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR 416
           VA G  HTI +SS G++Y +G +++GQLG G  +   +P  L A S + +    VS G R
Sbjct: 228 VACGWRHTISVSSSGELYTYGWSKYGQLGHGDCKDHLVPHKLQAFSDKLI--CQVSGGWR 285

Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACGWWHTL 470
           HT  +   G+++ WGWNK+GQ+G+GD +DR  P QV          ++CGW HT+
Sbjct: 286 HTMALTTGGQLYGWGWNKFGQVGVGDNVDRCSPVQVKFPHDQKVAQISCGWRHTI 340



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 67/226 (29%), Positives = 100/226 (44%), Gaps = 55/226 (24%)

Query: 298 PGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGV 357
           P   V  I+ GG HS  +     + ++G G  GQ G G TDD L P  +S+L   QI  V
Sbjct: 13  PPRRVLLISAGGSHSVALISGNVVCSWGRGEDGQLGHGDTDDRLLPTQLSALDAQQIVSV 72

Query: 358 AAGLWHT----------------------------------------------------- 364
             G  HT                                                     
Sbjct: 73  VCGADHTLAYSESKVEVYSWGWGDFGRLGHGNSSDLFIPQPIRALQGLRIKQIACGDSHC 132

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           + ++ +G+V ++G NQ GQLG G  +   +P+ +   + + V  K V+ GA H+  I ++
Sbjct: 133 LAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQ--TFQGVPIKMVAAGAEHSVAITEN 190

Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTL 470
           G+++ WGW +YG LGLGD  DR IP +V+++      VACGW HT+
Sbjct: 191 GELYGWGWGRYGNLGLGDRNDRCIPEKVSVDCDKMVLVACGWRHTI 236



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 93/362 (25%), Positives = 154/362 (42%), Gaps = 61/362 (16%)

Query: 49  VCGGGCGFAMAISDSR-KLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGW 107
           VCG      +A S+S+ ++ +WG   D G+    +     IP+P        I + A G 
Sbjct: 73  VCGAD--HTLAYSESKVEVYSWG-WGDFGRLGHGNSSDLFIPQPIRALQGLRIKQIACGD 129

Query: 108 AHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSR 167
           +HC+AVT  GEV +WG  +        G L  GT  D  V ++  +F   Q  P   V+ 
Sbjct: 130 SHCLAVTMEGEVQSWGRNQ-------NGQLGLGTTEDSLVPQKIQTF---QGVPIKMVAA 179

Query: 168 SSGGTSSGTD-----GRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVR 222
            +  + + T+     G G G  G+                 GD N    P  V+++   +
Sbjct: 180 GAEHSVAITENGELYGWGWGRYGNL--------------GLGDRNDRCIPEKVSVDCD-K 224

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  VA G RHT+++S  G+++ +G+   GQLG G         H +P    ++       
Sbjct: 225 MVLVACGWRHTISVSSSGELYTYGWSKYGQLGHGD-----CKDHLVPHKLQAFSD----- 274

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                              +  ++ G RH+  +T  G L  +GW  +GQ G G   D  S
Sbjct: 275 -----------------KLICQVSGGWRHTMALTTGGQLYGWGWNKFGQVGVGDNVDRCS 317

Query: 343 PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPS 402
           P  V      ++  ++ G  HTI ++   +VY++G    GQLG G       P++++A S
Sbjct: 318 PVQVKFPHDQKVAQISCGWRHTIAVTEKDNVYSWGRGTNGQLGIGDTIDWNYPKIIEALS 377

Query: 403 LE 404
           ++
Sbjct: 378 VD 379


>gi|356512860|ref|XP_003525133.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 437

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 120/414 (28%), Positives = 184/414 (44%), Gaps = 77/414 (18%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEAS------IVKAAAG 106
           G   ++A+     + +WG  +D GQ       HG+  +    PT+ S      I+    G
Sbjct: 22  GASHSVALLSGNVVCSWGRGED-GQL-----GHGDTDDRL-FPTKLSALDGQDIICVTCG 74

Query: 107 WAHCVAVTEGG-EVYTWGWKECVPSGRVFGDLSTGTGLDKDV---FERQSSFLTEQV--- 159
             H +A +E G +VY+WGW +       FG L  G   D  +    +     + +Q+   
Sbjct: 75  ADHTMARSESGRDVYSWGWGD-------FGRLGHGDHSDLLIPHPIKALQGLMIQQIACG 127

Query: 160 -SPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLN 218
            S    V+  S   S G +  G            L   TAE S          P  + + 
Sbjct: 128 DSHCLAVTMDSQVLSWGRNQNGE-----------LGLGTAEDS--------LLPQKIQIF 168

Query: 219 PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
             + I  VAAG  H++A++  G ++GWG+G  G LGLG                     D
Sbjct: 169 EEIPIKMVAAGAEHSVAITKDGNLYGWGWGRYGNLGLG---------------------D 207

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
           R+  L    V        V G+ +  +ACG RH+  ++ +G L T GWG YGQ G G  +
Sbjct: 208 RNDRLLPEKVT-------VDGDKMAMVACGWRHTICVSSSGGLYTNGWGKYGQLGHGDFE 260

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D L P  V +L    I  V+ G  H++ ++S G +  +G N+FGQ+G G +     P  +
Sbjct: 261 DHLVPRKVQALSDKFISQVSGGWRHSMALTSSGQLLGWGWNKFGQIGVGNNFDCCSPMQV 320

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
           + P  + V  + +SCG RHT  + +   V+ WG    GQLG G+ IDRN+P+ +
Sbjct: 321 NFPHDQKV--QMISCGWRHTIAVTERENVYSWGRGANGQLGNGETIDRNVPTII 372



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 95/295 (32%), Positives = 144/295 (48%), Gaps = 32/295 (10%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQ-VWGWGYGGEGQLGLGSRIRMV 262
           GD +   FP  ++   G  I  V  G  HT+A S+ G+ V+ WG+G  G+LG G    ++
Sbjct: 49  GDTDDRLFPTKLSALDGQDIICVTCGADHTMARSESGRDVYSWGWGDFGRLGHGDHSDLL 108

Query: 263 SSPHPIPCIES-----------------------SYGKDRSAALSRGSVNSEGPGFRVPG 299
             PHPI  ++                        S+G++++  L  G+        ++  
Sbjct: 109 I-PHPIKALQGLMIQQIACGDSHCLAVTMDSQVLSWGRNQNGELGLGTAEDSLLPQKIQI 167

Query: 300 NY---VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG 356
                +K +A G  HS  IT  G L  +GWG YG  G G  +D L P  V+ + G ++  
Sbjct: 168 FEEIPIKMVAAGAEHSVAITKDGNLYGWGWGRYGNLGLGDRNDRLLPEKVT-VDGDKMAM 226

Query: 357 VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR 416
           VA G  HTIC+SS G +Y  G  ++GQLG G  +   +PR + A  L +     VS G R
Sbjct: 227 VACGWRHTICVSSSGGLYTNGWGKYGQLGHGDFEDHLVPRKVQA--LSDKFISQVSGGWR 284

Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACGWWHTL 470
           H+  +   G++  WGWNK+GQ+G+G+  D   P QV        + ++CGW HT+
Sbjct: 285 HSMALTSSGQLLGWGWNKFGQIGVGNNFDCCSPMQVNFPHDQKVQMISCGWRHTI 339



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 129/256 (50%), Gaps = 30/256 (11%)

Query: 219 PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
           P  R+  V+AG  H++AL     V  WG G +GQLG G                     D
Sbjct: 12  PPRRVLLVSAGASHSVALLSGNVVCSWGRGEDGQLGHGDT------------------DD 53

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA-LLTFGWGLYGQCGQGST 337
           R       +++         G  +  + CG  H+   +++G  + ++GWG +G+ G G  
Sbjct: 54  RLFPTKLSALD---------GQDIICVTCGADHTMARSESGRDVYSWGWGDFGRLGHGDH 104

Query: 338 DDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
            D L P+ + +L G+ I+ +A G  H + ++ D  V ++G NQ G+LG G  +   LP+ 
Sbjct: 105 SDLLIPHPIKALQGLMIQQIACGDSHCLAVTMDSQVLSWGRNQNGELGLGTAEDSLLPQK 164

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC 457
           +     E +  K V+ GA H+  I  DG ++ WGW +YG LGLGD  DR +P +VT++G 
Sbjct: 165 IQI--FEEIPIKMVAAGAEHSVAITKDGNLYGWGWGRYGNLGLGDRNDRLLPEKVTVDGD 222

Query: 458 VPRNVACGWWHTLLLA 473
               VACGW HT+ ++
Sbjct: 223 KMAMVACGWRHTICVS 238



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 98/355 (27%), Positives = 159/355 (44%), Gaps = 53/355 (14%)

Query: 53  GCGFAMAISDS-RKLITWGSTDDLGQSYVTSGKHGE--IPEPFPLPTEASIVKAAAGWAH 109
           G    MA S+S R + +WG   D G+  +  G H +  IP P        I + A G +H
Sbjct: 74  GADHTMARSESGRDVYSWG-WGDFGR--LGHGDHSDLLIPHPIKALQGLMIQQIACGDSH 130

Query: 110 CVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSS 169
           C+AVT   +V +WG  +        G+L  GT  D  + ++   F  E++  +   + + 
Sbjct: 131 CLAVTMDSQVLSWGRNQN-------GELGLGTAEDSLLPQKIQIF--EEIPIKMVAAGAE 181

Query: 170 GGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAG 229
              +   DG   G    +   + L          GD N    P  VT++ G ++A VA G
Sbjct: 182 HSVAITKDGNLYGWGWGRYGNLGL----------GDRNDRLLPEKVTVD-GDKMAMVACG 230

Query: 230 GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVN 289
            RHT+ +S  G ++  G+G  GQLG G         H +P         +  ALS     
Sbjct: 231 WRHTICVSSSGGLYTNGWGKYGQLGHGD-----FEDHLVP--------RKVQALSD---- 273

Query: 290 SEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSL 349
                      ++  ++ G RHS  +T +G LL +GW  +GQ G G+  D  SP  V+  
Sbjct: 274 ----------KFISQVSGGWRHSMALTSSGQLLGWGWNKFGQIGVGNNFDCCSPMQVNFP 323

Query: 350 LGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLE 404
              +++ ++ G  HTI ++   +VY++G    GQLG G      +P +++A S++
Sbjct: 324 HDQKVQMISCGWRHTIAVTERENVYSWGRGANGQLGNGETIDRNVPTIIEAFSVD 378



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 49/114 (42%), Gaps = 8/114 (7%)

Query: 34  LVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFP 93
           LV R    +   +     GG   +MA++ S +L+ WG  +  GQ  V +      P    
Sbjct: 263 LVPRKVQALSDKFISQVSGGWRHSMALTSSGQLLGWG-WNKFGQIGVGNNFDCCSPMQVN 321

Query: 94  LPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDV 147
            P +  +   + GW H +AVTE   VY+WG           G L  G  +D++V
Sbjct: 322 FPHDQKVQMISCGWRHTIAVTERENVYSWGRG-------ANGQLGNGETIDRNV 368


>gi|348688336|gb|EGZ28150.1| hypothetical protein PHYSODRAFT_321832 [Phytophthora sojae]
          Length = 423

 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 115/388 (29%), Positives = 170/388 (43%), Gaps = 60/388 (15%)

Query: 100 IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQV 159
           IV  + G  H +A+T  G VY+WGW      G   GDL +     K  F  Q     + V
Sbjct: 55  IVAVSCGSRHTMALTASGAVYSWGWGSMGQLGH--GDLKSINVPQKIAFFEQEGLKVDYV 112

Query: 160 SPRSQVSRSSGGTSSG---TDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVT 216
           S         GG  S     DG       +   ++ L K+   +  S       FP    
Sbjct: 113 S--------CGGCHSAAVTNDGTLYMWGETHWGQLGLPKEFEAAHES-------FPVKCP 157

Query: 217 LNPGV---RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR---------IRMVSS 264
           L  GV    +  V+ GG HT AL+++G+V+ WG G  GQLG+GS          +  VS 
Sbjct: 158 LLEGVADESVVKVSCGGTHTAALTNLGRVYVWGRGDSGQLGIGSAWLKDTDDNGLLGVSR 217

Query: 265 PHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTF 324
           PH +                         GF   G  V  +ACG  HSA +T+ G +  +
Sbjct: 218 PHLVE------------------------GFN--GEKVVQVACGAFHSAAVTEQGHVYIW 251

Query: 325 GWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQL 384
           G   YG  G G T D+ +P  V     I    V+ G WHT+ ++  GD YAFG  ++G+L
Sbjct: 252 GKEDYGMLGVGQTSDQQTPKRVEFFDDIPALRVSCGGWHTMVVAKSGDCYAFGRGEYGRL 311

Query: 385 GTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVI 444
           G G  ++ T P L+ A   + V     +CG  HT  +  DG  +  G   +G+LG+ D+ 
Sbjct: 312 GLGDTKSRTRPHLVKALKGQTV--IQAACGGSHTLFVTSDGIAYVAGRPDHGRLGMTDMK 369

Query: 445 DRNIPSQVTIEGCVPRNVACGWWHTLLL 472
             ++P+++ +     R V+ G  H++ L
Sbjct: 370 PLSVPTRLDLGPIPVRQVSAGGAHSMAL 397



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 105/357 (29%), Positives = 158/357 (44%), Gaps = 60/357 (16%)

Query: 165 VSRSSGGTSSGTDGRGSGEEGS----KRRRISLAKQTAESSSSGDENLSAFPCLVTLNPG 220
           +S S+G T       G  ++G      +RR +LA          D + S FP  +    G
Sbjct: 1   MSISTGATECAVVAFGCNDDGQLGTGAKRRPTLAID--------DVSASNFPKQLGGLLG 52

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES------- 273
             I  V+ G RHT+AL+  G V+ WG+G  GQLG G  ++ ++ P  I   E        
Sbjct: 53  EEIVAVSCGSRHTMALTASGAVYSWGWGSMGQLGHGD-LKSINVPQKIAFFEQEGLKVDY 111

Query: 274 -SYGKDRSAALSRG------------------SVNSEGPGFRVPGNYVKGIA-------- 306
            S G   SAA++                       +    F V    ++G+A        
Sbjct: 112 VSCGGCHSAAVTNDGTLYMWGETHWGQLGLPKEFEAAHESFPVKCPLLEGVADESVVKVS 171

Query: 307 CGGRHSAVITDAGALLTFGWGLYGQCGQGS-----TDDE-----LSPNCVSSLLGIQIEG 356
           CGG H+A +T+ G +  +G G  GQ G GS     TDD        P+ V    G ++  
Sbjct: 172 CGGTHTAALTNLGRVYVWGRGDSGQLGIGSAWLKDTDDNGLLGVSRPHLVEGFNGEKVVQ 231

Query: 357 VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR 416
           VA G +H+  ++  G VY +G   +G LG G    +  P+ ++    +++ +  VSCG  
Sbjct: 232 VACGAFHSAAVTEQGHVYIWGKEDYGMLGVGQTSDQQTPKRVEF--FDDIPALRVSCGGW 289

Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLL 472
           HT V+A  G  + +G  +YG+LGLGD   R  P  V  ++G      ACG  HTL +
Sbjct: 290 HTMVVAKSGDCYAFGRGEYGRLGLGDTKSRTRPHLVKALKGQTVIQAACGGSHTLFV 346



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 78/330 (23%), Positives = 119/330 (36%), Gaps = 59/330 (17%)

Query: 52  GGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPL---PTEASIVKAAAG 106
           GGC  A A+++   L  WG T    LG        H   P   PL     + S+VK + G
Sbjct: 115 GGCHSA-AVTNDGTLYMWGETHWGQLGLPKEFEAAHESFPVKCPLLEGVADESVVKVSCG 173

Query: 107 WAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFER-----QSSFLTEQVSP 161
             H  A+T  G VY WG  +        G L  G+   KD  +          L E  + 
Sbjct: 174 GTHTAALTNLGRVYVWGRGDS-------GQLGIGSAWLKDTDDNGLLGVSRPHLVEGFNG 226

Query: 162 RSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGV 221
              V  + G   S        E+G         K+       G  +    P  V     +
Sbjct: 227 EKVVQVACGAFHSAA----VTEQG---HVYIWGKEDYGMLGVGQTSDQQTPKRVEFFDDI 279

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
               V+ GG HT+ ++  G  + +G G  G+LGLG   +  + PH +  ++         
Sbjct: 280 PALRVSCGGWHTMVVAKSGDCYAFGRGEYGRLGLGD-TKSRTRPHLVKALK--------- 329

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL 341
                            G  V   ACGG H+  +T  G     G   +G+ G      ++
Sbjct: 330 -----------------GQTVIQAACGGSHTLFVTSDGIAYVAGRPDHGRLGM----TDM 368

Query: 342 SPNCVSSLLG---IQIEGVAAGLWHTICIS 368
            P  V + L    I +  V+AG  H++ ++
Sbjct: 369 KPLSVPTRLDLGPIPVRQVSAGGAHSMALT 398


>gi|195622006|gb|ACG32833.1| HECT domain and RCC1-like domain-containing protein 2 [Zea mays]
          Length = 353

 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 86/245 (35%), Positives = 126/245 (51%), Gaps = 29/245 (11%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P  V    G++I  +A G  H LA++  G+V  WG    GQLGLG+    +  P  I   
Sbjct: 109 PQPVKALQGLKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLL-PQKIQAF 167

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
           ES                            VK IA G  H+A +T+ G L  +GWG YG 
Sbjct: 168 ESVC--------------------------VKMIAAGAEHTAAVTEDGDLYGWGWGRYGN 201

Query: 332 CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
            G G  +D L P  VSS+ G ++  VA G  HTI +S  G++Y +G +++GQLG G  + 
Sbjct: 202 LGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFED 261

Query: 392 ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
             +P  ++A  L++     +S G RHT  +  +GK++ WGWNK+GQ+G+G+  D + P Q
Sbjct: 262 HLVPHKVEA--LKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHSSPGQ 319

Query: 452 VTIEG 456
           V+  G
Sbjct: 320 VSFPG 324



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 85/258 (32%), Positives = 136/258 (52%), Gaps = 31/258 (12%)

Query: 218 NPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
           +P   +  V+AG  H++AL     +  WG G +GQLG G      +    +P + S    
Sbjct: 10  SPPQTVVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGD-----AEDRLVPTVLS---- 60

Query: 278 DRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVIT-DAGALLTFGWGLYGQCGQGS 336
                           GF  P   +  + CG  H+   + D   + ++GWG +G+ G G+
Sbjct: 61  ----------------GFDAPA--ITSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGN 102

Query: 337 TDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPR 396
           + D  +P  V +L G++I+ +A G  H + ++  G+V ++G NQ GQLG G  +   LP+
Sbjct: 103 SSDVFTPQPVKALQGLKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQ 162

Query: 397 LLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIE 455
            + A   E+V  K ++ GA HTA + +DG ++ WGW +YG LGLGD  DR +P +V ++E
Sbjct: 163 KIQA--FESVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVE 220

Query: 456 GCVPRNVACGWWHTLLLA 473
           G     VACGW HT+ ++
Sbjct: 221 GEKMVLVACGWRHTITVS 238



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 86/271 (31%), Positives = 132/271 (48%), Gaps = 31/271 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS-DIGQVWGWGYGGEGQLGLGSRIRMV 262
           GD      P +++      I +V  G  HT A S D  QV+ WG+G  G+LG G+    V
Sbjct: 48  GDAEDRLVPTVLSGFDAPAITSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSD-V 106

Query: 263 SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL 322
            +P P+  ++                          G  +K IACG  H   +T AG + 
Sbjct: 107 FTPQPVKALQ--------------------------GLKIKQIACGDSHCLAVTMAGEVQ 140

Query: 323 TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFG 382
           ++G    GQ G G+T+D L P  + +   + ++ +AAG  HT  ++ DGD+Y +G  ++G
Sbjct: 141 SWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYG 200

Query: 383 QLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGD 442
            LG G      LP      S+E      V+CG RHT  ++D G ++ +GW+KYGQLG GD
Sbjct: 201 NLGLGDRNDRLLPE--KVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGD 258

Query: 443 VIDRNIPSQV-TIEGCVPRNVACGWWHTLLL 472
             D  +P +V  ++      ++ GW HT+ L
Sbjct: 259 FEDHLVPHKVEALKDSTISQISGGWRHTMAL 289



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 101/357 (28%), Positives = 157/357 (43%), Gaps = 52/357 (14%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
           G   ++A+     L +WG  +D GQ      +   +P         +I     G  H  A
Sbjct: 21  GASHSVALLTGNVLCSWGRGED-GQLGHGDAEDRLVPTVLSGFDAPAITSVICGADHTTA 79

Query: 113 VTEGG-EVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG 171
            +E   +VY+WGW +       FG L  G G   DVF  Q     + +    ++ + + G
Sbjct: 80  YSEDELQVYSWGWGD-------FGRL--GHGNSSDVFTPQPVKALQGL----KIKQIACG 126

Query: 172 TSSGTDGRGSGEEGS--KRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAG 229
            S       +GE  S  + +   L   T E S          P  +     V +  +AAG
Sbjct: 127 DSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDS--------LLPQKIQAFESVCVKMIAAG 178

Query: 230 GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVN 289
             HT A+++ G ++GWG+G  G LGLG                     DR+  L    V+
Sbjct: 179 AEHTAAVTEDGDLYGWGWGRYGNLGLG---------------------DRNDRLLPEKVS 217

Query: 290 SEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSL 349
           S      V G  +  +ACG RH+  ++D+G L T+GW  YGQ G G  +D L P+ V +L
Sbjct: 218 S------VEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPHKVEAL 271

Query: 350 LGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENV 406
               I  ++ G  HT+ ++S+G +Y +G N+FGQ+G G +   + P  +  P  EN+
Sbjct: 272 KDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHSSPGQVSFPGSENL 328


>gi|281205822|gb|EFA80011.1| regulator of chromosome condensation domain-containing protein
            [Polysphondylium pallidum PN500]
          Length = 1800

 Score =  135 bits (339), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 113/424 (26%), Positives = 184/424 (43%), Gaps = 72/424 (16%)

Query: 53   GCGFA--MAISDSRKLITWG--STDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWA 108
             CG+     IS   +L TWG  S   LG   +  GK+   P        + I+  + G  
Sbjct: 1038 ACGWEHIAVISSDGELFTWGNNSQGQLGHG-LNVGKYQSTPRRVETFKSSPIIMISCGGE 1096

Query: 109  HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS-------P 161
            H VAV +  ++Y+WG      S R +G L  G    +++ ++   F   Q          
Sbjct: 1097 HSVAVDQSFQIYSWG------SSR-YGQLGHGVLTPQNLPKKIEDFTGGQKVLAIATGYA 1149

Query: 162  RSQVSRSSGG--TSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
             + V + SG   T    D    G    K R + +  +T+E              +V ++ 
Sbjct: 1150 HTMVLKKSGDLFTFGWNDSGQLGLGNFKNRAVPMRIETSE--------------IVGIH- 1194

Query: 220  GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
            G RI  +AAG  H++   D G ++ WG   +GQLG G+             IE S    +
Sbjct: 1195 GERITAIAAGHSHSIMCLDNGDIYSWGANSKGQLGHGN-------------IEKSLRPKQ 1241

Query: 280  SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDD 339
               L               G  +  I+CG  H+  I++  ++  +G G +   G GS  +
Sbjct: 1242 IDELK--------------GKPIIKISCGHFHTVAISELNSVYCWGQGEHMCLGNGSNKN 1287

Query: 340  ELSPNCVSSLLGIQIEGVAAGLWHTICI------SSDGDVYAFGGNQFGQLGTGGDQAET 393
            ELSP  +   +  +IE V  GL+HT  +      S  G+VY  GG + G+LGTGGD    
Sbjct: 1288 ELSPKMIEFFINKKIEKVVCGLYHTATVTAAENGSDRGNVYICGGGEHGKLGTGGDLKTP 1347

Query: 394  L---PRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
                P     PSL +++    S G+  +A+I ++G ++ WG+  +GQ+G G   D  +P+
Sbjct: 1348 FFDKPHPAVIPSLNSMNIVGFSSGSEFSAIITNNGALYTWGYGNFGQIGNGKTEDMWLPT 1407

Query: 451  QVTI 454
            ++++
Sbjct: 1408 KISL 1411



 Score =  112 bits (281), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 83/284 (29%), Positives = 130/284 (45%), Gaps = 40/284 (14%)

Query: 222  RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI-RMVSSPHPIPCIES------- 273
            +  +VA G  H   +S  G+++ WG   +GQLG G  + +  S+P  +   +S       
Sbjct: 1033 KAVSVACGWEHIAVISSDGELFTWGNNSQGQLGHGLNVGKYQSTPRRVETFKSSPIIMIS 1092

Query: 274  ----------------SYGKDRSAALSRGSVNSEGPGFRVP----GNYVKGIACGGRHSA 313
                            S+G  R   L  G +  +    ++     G  V  IA G  H+ 
Sbjct: 1093 CGGEHSVAVDQSFQIYSWGSSRYGQLGHGVLTPQNLPKKIEDFTGGQKVLAIATGYAHTM 1152

Query: 314  VITDAGALLTFGWGLYGQCGQGSTDDELSPNCV--SSLLGI---QIEGVAAGLWHTICIS 368
            V+  +G L TFGW   GQ G G+  +   P  +  S ++GI   +I  +AAG  H+I   
Sbjct: 1153 VLKKSGDLFTFGWNDSGQLGLGNFKNRAVPMRIETSEIVGIHGERITAIAAGHSHSIMCL 1212

Query: 369  SDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVF 428
             +GD+Y++G N  GQLG G  +    P+ +D   L+      +SCG  HT  I++   V+
Sbjct: 1213 DNGDIYSWGANSKGQLGHGNIEKSLRPKQID--ELKGKPIIKISCGHFHTVAISELNSVY 1270

Query: 429  CWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPR---NVACGWWHT 469
            CWG  ++  LG G   ++N  S   IE  + +    V CG +HT
Sbjct: 1271 CWGQGEHMCLGNGS--NKNELSPKMIEFFINKKIEKVVCGLYHT 1312



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/120 (31%), Positives = 68/120 (56%), Gaps = 6/120 (5%)

Query: 357  VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD--QAETLPRLLDAPSLENVHSKSVSCG 414
            VA G  H   ISSDG+++ +G N  GQLG G +  + ++ PR ++  + ++     +SCG
Sbjct: 1037 VACGWEHIAVISSDGELFTWGNNSQGQLGHGLNVGKYQSTPRRVE--TFKSSPIIMISCG 1094

Query: 415  ARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT--IEGCVPRNVACGWWHTLLL 472
              H+  +    +++ WG ++YGQLG G +  +N+P ++     G     +A G+ HT++L
Sbjct: 1095 GEHSVAVDQSFQIYSWGSSRYGQLGHGVLTPQNLPKKIEDFTGGQKVLAIATGYAHTMVL 1154



 Score = 45.8 bits (107), Expect = 0.044,   Method: Composition-based stats.
 Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 3/64 (4%)

Query: 410  SVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR--NIPSQV-TIEGCVPRNVACGW 466
            SV+CG  H AVI+ DG++F WG N  GQLG G  + +  + P +V T +      ++CG 
Sbjct: 1036 SVACGWEHIAVISSDGELFTWGNNSQGQLGHGLNVGKYQSTPRRVETFKSSPIIMISCGG 1095

Query: 467  WHTL 470
             H++
Sbjct: 1096 EHSV 1099


>gi|301117316|ref|XP_002906386.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262107735|gb|EEY65787.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 419

 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 115/382 (30%), Positives = 167/382 (43%), Gaps = 37/382 (9%)

Query: 94  LPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSS 153
           LP E  IV  + G  H +A+T  G VY+WGW      G   GDL       K  F  Q  
Sbjct: 46  LPDE-DIVAVSCGSRHTMALTSSGAVYSWGWGSMGQLGH--GDLKIINEPQKIAFFEQER 102

Query: 154 FLTEQVSPRSQVSRSSGGTSSGT---DGRGSGEEGSKRRRISLAKQTAESSSSGDENLSA 210
              + +S         GG  S     DG       S   ++ L K+      +  E+L  
Sbjct: 103 LEVDYIS--------CGGCHSAAVTKDGTLYVWGESHWGQLGLPKEY----EAAHESLPV 150

Query: 211 FPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPC 270
              +     G  I  V+ GG HT AL+  G+V+ WG G  GQLG+GS + M       P 
Sbjct: 151 KCPMPEGEAGETIVKVSCGGTHTAALTSFGRVYVWGRGDSGQLGIGS-VWMKD-----PE 204

Query: 271 IESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
            ES  G  R   L               G  V  +ACG  HSA +T+ G +  +G   YG
Sbjct: 205 NESLMGASRPHLLKA-----------FNGEKVVQVACGAFHSAAVTEQGHVYVWGKEDYG 253

Query: 331 QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
             G G + D+  P  +     I +  V+ G WHT+ ++  GD YAFG  ++G+LG G  +
Sbjct: 254 MLGVGQSSDQQIPKRLEYFDDIPVLRVSCGGWHTVVVAKSGDCYAFGRGEYGRLGLGDTK 313

Query: 391 AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
           + T P L+ A  L+       +CG  HT  +  DG  +  G   +G+LGL D+    +P+
Sbjct: 314 SRTRPHLVKA--LKGKTVIQAACGGSHTLFVTSDGTAYVAGRPDHGRLGLADMKALGVPT 371

Query: 451 QVTIEGCVPRNVACGWWHTLLL 472
           ++ +     R  + G  H++ L
Sbjct: 372 RLDLGPIPVRQFSAGGAHSVAL 393



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 96/330 (29%), Positives = 149/330 (45%), Gaps = 56/330 (16%)

Query: 188 RRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGY 247
           +RR +LA          D + S FP  +   P   I  V+ G RHT+AL+  G V+ WG+
Sbjct: 24  KRRPTLAID--------DVSASNFPQQIGNLPDEDIVAVSCGSRHTMALTSSGAVYSWGW 75

Query: 248 GGEGQLGLGSRIRMVSSPHPIPCIES--------SYGKDRSAALSRG------------- 286
           G  GQLG G  +++++ P  I   E         S G   SAA+++              
Sbjct: 76  GSMGQLGHGD-LKIINEPQKIAFFEQERLEVDYISCGGCHSAAVTKDGTLYVWGESHWGQ 134

Query: 287 -------SVNSEGPGFRVP------GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCG 333
                      E    + P      G  +  ++CGG H+A +T  G +  +G G  GQ G
Sbjct: 135 LGLPKEYEAAHESLPVKCPMPEGEAGETIVKVSCGGTHTAALTSFGRVYVWGRGDSGQLG 194

Query: 334 QGST------DDEL----SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQ 383
            GS       ++ L     P+ + +  G ++  VA G +H+  ++  G VY +G   +G 
Sbjct: 195 IGSVWMKDPENESLMGASRPHLLKAFNGEKVVQVACGAFHSAAVTEQGHVYVWGKEDYGM 254

Query: 384 LGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDV 443
           LG G    + +P+ L+    +++    VSCG  HT V+A  G  + +G  +YG+LGLGD 
Sbjct: 255 LGVGQSSDQQIPKRLE--YFDDIPVLRVSCGGWHTVVVAKSGDCYAFGRGEYGRLGLGDT 312

Query: 444 IDRNIPSQV-TIEGCVPRNVACGWWHTLLL 472
             R  P  V  ++G      ACG  HTL +
Sbjct: 313 KSRTRPHLVKALKGKTVIQAACGGSHTLFV 342



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 17/169 (10%)

Query: 321 LLTFGWGLYGQCGQGSTD------DELS----PNCVSSLLGIQIEGVAAGLWHTICISSD 370
           +  FG    GQ G G+        D++S    P  + +L    I  V+ G  HT+ ++S 
Sbjct: 8   VTAFGCNDDGQLGTGAKRRPTLAIDDVSASNFPQQIGNLPDEDIVAVSCGSRHTMALTSS 67

Query: 371 GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
           G VY++G    GQLG G  +    P+ +     E +    +SCG  H+A +  DG ++ W
Sbjct: 68  GAVYSWGWGSMGQLGHGDLKIINEPQKIAFFEQERLEVDYISCGGCHSAAVTKDGTLYVW 127

Query: 431 GWNKYGQLGLG---DVIDRNIPSQVTI----EGCVPRNVACGWWHTLLL 472
           G + +GQLGL    +    ++P +  +     G     V+CG  HT  L
Sbjct: 128 GESHWGQLGLPKEYEAAHESLPVKCPMPEGEAGETIVKVSCGGTHTAAL 176



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/115 (35%), Positives = 56/115 (48%), Gaps = 15/115 (13%)

Query: 368 SSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSK----------SVSCGARH 417
           +S+  V AFG N  GQLGTG  +  TL   +D  S  N   +          +VSCG+RH
Sbjct: 3   NSECVVTAFGCNDDGQLGTGAKRRPTLA--IDDVSASNFPQQIGNLPDEDIVAVSCGSRH 60

Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI---EGCVPRNVACGWWHT 469
           T  +   G V+ WGW   GQLG GD+   N P ++     E      ++CG  H+
Sbjct: 61  TMALTSSGAVYSWGWGSMGQLGHGDLKIINEPQKIAFFEQERLEVDYISCGGCHS 115


>gi|330800861|ref|XP_003288451.1| hypothetical protein DICPUDRAFT_79261 [Dictyostelium purpureum]
 gi|325081510|gb|EGC35023.1| hypothetical protein DICPUDRAFT_79261 [Dictyostelium purpureum]
          Length = 1909

 Score =  134 bits (336), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 118/414 (28%), Positives = 175/414 (42%), Gaps = 59/414 (14%)

Query: 57  AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPT--EASIVKAAAGWAHCVAVT 114
           A+ +  SR L+TWGS  +    +  + K    P P  LP    + I   ++G  +  A+T
Sbjct: 591 AIHLDTSRGLMTWGSASNCKLGFKVASKEQSQPTPERLPNFNVSDICSISSGSYYSAALT 650

Query: 115 EGGEVYTWGWKECV-PSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS-PRSQVSRSSGGT 172
           E G+VY WG      P   V G       L     E  +  +   +    S   R++G  
Sbjct: 651 ENGDVYMWGRGSVKNPPVPVLGIPQIEDQLLPIKLESLTDIVVVSIGFYHSAAVRANGEL 710

Query: 173 SSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRH 232
            +     G GEEG                  GD      P ++       I  V  G +H
Sbjct: 711 LTW----GVGEEGQL--------------GHGDTQNQVEPKVIQSLTSFWITQVQCGEKH 752

Query: 233 TLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEG 292
           T+ L+  G+V+ WG    GQLGLG   R    P P+  +E                    
Sbjct: 753 TICLTKNGKVYTWGSSEYGQLGLGDTTRYCK-PMPVTALEKYN----------------- 794

Query: 293 PGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGI 352
                    V  IA G  H AV+T++  +L FG G       G+      P  V SL  +
Sbjct: 795 ---------VLQIASGSTHCAVLTNSKEVLVFGNG----AAMGAASIISIPTLVPSLKYL 841

Query: 353 QIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVS 412
            I+ +  G + T  IS  GDVY +G  Q  +LG G +Q E+ P+L++A  L N   + +S
Sbjct: 842 HIDKLCCGHYSTAAISECGDVYTWGTGQ--ELGHGNNQTESTPKLVEA--LRNQSIRQIS 897

Query: 413 CGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
           CG RHTA + D G++F  G + +GQLG     D+N P ++ ++      +V+CG
Sbjct: 898 CGGRHTAFLTDSGRIFTSGKDSFGQLG-HQAGDQNKPKKIESLTKTTFISVSCG 950



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 77/299 (25%), Positives = 126/299 (42%), Gaps = 77/299 (25%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I ++++G  ++ AL++ G V+ WG G             V +P P+P +     +D+   
Sbjct: 636 ICSISSGSYYSAALTENGDVYMWGRGS------------VKNP-PVPVLGIPQIEDQLLP 682

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
           +   S+             +  ++ G  HSA +   G LLT+G G  GQ G G T +++ 
Sbjct: 683 IKLESLTD-----------IVVVSIGFYHSAAVRANGELLTWGVGEEGQLGHGDTQNQVE 731

Query: 343 PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG--------------- 387
           P  + SL    I  V  G  HTIC++ +G VY +G +++GQLG G               
Sbjct: 732 PKVIQSLTSFWITQVQCGEKHTICLTKNGKVYTWGSSEYGQLGLGDTTRYCKPMPVTALE 791

Query: 388 --------------------------GDQAE-------TLPRLLDAPSLENVHSKSVSCG 414
                                     G+ A        ++P L+  PSL+ +H   + CG
Sbjct: 792 KYNVLQIASGSTHCAVLTNSKEVLVFGNGAAMGAASIISIPTLV--PSLKYLHIDKLCCG 849

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLL 472
              TA I++ G V+ WG  +  +LG G+    + P  V  +     R ++CG  HT  L
Sbjct: 850 HYSTAAISECGDVYTWGTGQ--ELGHGNNQTESTPKLVEALRNQSIRQISCGGRHTAFL 906



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 83/362 (22%), Positives = 142/362 (39%), Gaps = 67/362 (18%)

Query: 14  VFMWGYLPGALPQRSPILSPLVVR---LPLTVGSAWRDVCGGGCGF--AMAISDSRKLIT 68
           V+MWG      P   P+L    +    LP+ + S   D+     GF  + A+  + +L+T
Sbjct: 655 VYMWGRGSVKNPP-VPVLGIPQIEDQLLPIKLESL-TDIVVVSIGFYHSAAVRANGELLT 712

Query: 69  WGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECV 128
           WG  ++ GQ      ++   P+     T   I +   G  H + +T+ G+VYTWG  E  
Sbjct: 713 WGVGEE-GQLGHGDTQNQVEPKVIQSLTSFWITQVQCGEKHTICLTKNGKVYTWGSSE-- 769

Query: 129 PSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKR 188
                +G L  G     D            +   + +  +SG T                
Sbjct: 770 -----YGQLGLG-----DTTRYCKPMPVTALEKYNVLQIASGSTHCAV------------ 807

Query: 189 RRISLAKQT---AESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGW 245
             ++ +K+       ++ G  ++ + P LV     + I  +  G   T A+S+ G V+ W
Sbjct: 808 --LTNSKEVLVFGNGAAMGAASIISIPTLVPSLKYLHIDKLCCGHYSTAAISECGDVYTW 865

Query: 246 GYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGI 305
           G G E  LG G+  +  S+P  +  + +                            ++ I
Sbjct: 866 GTGQE--LGHGNN-QTESTPKLVEALRN--------------------------QSIRQI 896

Query: 306 ACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTI 365
           +CGGRH+A +TD+G + T G   +GQ G  + D    P  + SL       V+ G  + I
Sbjct: 897 SCGGRHTAFLTDSGRIFTSGKDSFGQLGHQAGDQN-KPKKIESLTKTTFISVSCGENYNI 955

Query: 366 CI 367
            +
Sbjct: 956 AL 957



 Score = 40.0 bits (92), Expect = 2.5,   Method: Composition-based stats.
 Identities = 43/174 (24%), Positives = 74/174 (42%), Gaps = 31/174 (17%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
           G      +++S++++ +G+   +G + + S     IP   P      I K   G     A
Sbjct: 801 GSTHCAVLTNSKEVLVFGNGAAMGAASIIS-----IPTLVPSLKYLHIDKLCCGHYSTAA 855

Query: 113 VTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFE--------------RQSSFLTEQ 158
           ++E G+VYTWG      +G+  G  +  T     + E              R ++FLT+ 
Sbjct: 856 ISECGDVYTWG------TGQELGHGNNQTESTPKLVEALRNQSIRQISCGGRHTAFLTD- 908

Query: 159 VSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDE-NLSAF 211
               S    +SG  S G  G  +G++   ++  SL K T  S S G+  N++ F
Sbjct: 909 ----SGRIFTSGKDSFGQLGHQAGDQNKPKKIESLTKTTFISVSCGENYNIALF 958


>gi|428179449|gb|EKX48320.1| hypothetical protein GUITHDRAFT_162457 [Guillardia theta CCMP2712]
          Length = 580

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/254 (35%), Positives = 129/254 (50%), Gaps = 35/254 (13%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
           VA GG HT+A+++ G+V  WG+G EGQLG G+          +P +  +    R      
Sbjct: 75  VACGGHHTVAVTEDGEVVSWGWGNEGQLGSGNAF-----DQTVPAVVKALSNHR------ 123

Query: 286 GSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNC 345
                           V G+ACG  H+AV+TD G ++ +G G  GQ GQG     L P  
Sbjct: 124 ----------------VCGVACGYYHTAVVTDVGLVMCWGKGNSGQLGQGDWTSSLLPRT 167

Query: 346 VSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAET----LPRLLDAP 401
           VS+L   +I  +A G+ HT+ +S +G++Y++G    GQLG G  Q ET     P+ +   
Sbjct: 168 VSTLYNEKIRQIACGMAHTLALSVNGEIYSWGAGADGQLGVGKHQEETADVATPQKVRVD 227

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVP 459
             E    + ++CG+RH   I DD ++F WG    G+LGLGD   R  P+ V  +IE    
Sbjct: 228 EEEKF--EFIACGSRHCMAITDDCRLFSWGLGADGRLGLGDSESRFSPTVVRRSIENLRI 285

Query: 460 RNVACGWWHTLLLA 473
             VA G  HT +L+
Sbjct: 286 CYVAAGGHHTAVLS 299



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 121/397 (30%), Positives = 169/397 (42%), Gaps = 77/397 (19%)

Query: 101 VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
           +  A G  H VAVTE GEV +WGW          G L +G   D+ V     +    +V 
Sbjct: 73  IYVACGGHHTVAVTEDGEVVSWGWGN-------EGQLGSGNAFDQTVPAVVKALSNHRVC 125

Query: 161 PRSQVSRSSGGTSSGTD-------GRG-SGEEGSKRRRISLAKQTAESSSSGDENLSAFP 212
               V+     T+  TD       G+G SG+ G                  GD   S  P
Sbjct: 126 G---VACGYYHTAVVTDVGLVMCWGKGNSGQLGQ-----------------GDWTSSLLP 165

Query: 213 CLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM---VSSPHPIP 269
             V+     +I  +A G  HTLALS  G+++ WG G +GQLG+G        V++P  + 
Sbjct: 166 RTVSTLYNEKIRQIACGMAHTLALSVNGEIYSWGAGADGQLGVGKHQEETADVATPQKVR 225

Query: 270 CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
             E                              + IACG RH   ITD   L ++G G  
Sbjct: 226 VDEE--------------------------EKFEFIACGSRHCMAITDDCRLFSWGLGAD 259

Query: 330 GQCGQGSTDDELSPNCVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG- 387
           G+ G G ++   SP  V  S+  ++I  VAAG  HT  +S +G+++  G   +GQLG G 
Sbjct: 260 GRLGLGDSESRFSPTVVRRSIENLRICYVAAGGHHTAVLSDNGEIFTCGRGSYGQLGHGD 319

Query: 388 GDQAETLPR---------LLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
            D   TL +         LL    L +      +CG  HT VI+  G+VF WG  + GQL
Sbjct: 320 ADPQLTLKKARALRHGCLLLHIVQLRDKKIIKAACGDTHTLVISTAGEVFAWGAAEDGQL 379

Query: 439 GLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAVP 475
           G G     N P ++T    +  +V+CG  H+   AVP
Sbjct: 380 GTGGTEGANSPVELTSLRGLVGDVSCGLVHS--AAVP 414



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/187 (35%), Positives = 92/187 (49%), Gaps = 19/187 (10%)

Query: 305 IACGGRHSAVITDAGALLTF-GWGLYGQCGQGSTDDELSPN------------CVSSLLG 351
           +A G R    + D G   +  GWG +G+ G G T  +L P               ++L  
Sbjct: 7   MAEGERLRRELEDGGKRTSLQGWGEFGRLGHGDTLSQLEPKRLRFDKRFPVSLSFTALAH 66

Query: 352 IQIEG---VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHS 408
             + G   VA G  HT+ ++ DG+V ++G    GQLG+G    +T+P ++ A  L N   
Sbjct: 67  ESLNGAIYVACGGHHTVAVTEDGEVVSWGWGNEGQLGSGNAFDQTVPAVVKA--LSNHRV 124

Query: 409 KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWW 467
             V+CG  HTAV+ D G V CWG    GQLG GD     +P  V T+     R +ACG  
Sbjct: 125 CGVACGYYHTAVVTDVGLVMCWGKGNSGQLGQGDWTSSLLPRTVSTLYNEKIRQIACGMA 184

Query: 468 HTLLLAV 474
           HTL L+V
Sbjct: 185 HTLALSV 191



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 106/414 (25%), Positives = 177/414 (42%), Gaps = 67/414 (16%)

Query: 24  LPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSG 83
             +R P+          ++  A    CGG     +A+++  ++++WG  ++ GQ    + 
Sbjct: 51  FDKRFPVSLSFTALAHESLNGAIYVACGGH--HTVAVTEDGEVVSWGWGNE-GQLGSGNA 107

Query: 84  KHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGL 143
               +P      +   +   A G+ H   VT+ G V  WG           G L  G   
Sbjct: 108 FDQTVPAVVKALSNHRVCGVACGYYHTAVVTDVGLVMCWGKGNS-------GQLGQGDWT 160

Query: 144 DKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAE 199
              +    S+   E++  R      +   +   +G     G+G +G    ++ + K   E
Sbjct: 161 SSLLPRTVSTLYNEKI--RQIACGMAHTLALSVNGEIYSWGAGADG----QLGVGKHQEE 214

Query: 200 SSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
           ++        A P  V ++   +   +A G RH +A++D  +++ WG G +G+LGLG   
Sbjct: 215 TADV------ATPQKVRVDEEEKFEFIACGSRHCMAITDDCRLFSWGLGADGRLGLGDS- 267

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAG 319
                       ES +    S  + R S+ +     R+   YV   A GG H+AV++D G
Sbjct: 268 ------------ESRF----SPTVVRRSIEN----LRIC--YV---AAGGHHTAVLSDNG 302

Query: 320 ALLTFGWGLYGQCGQGSTDDELSPNCVSS------LLGI------QIEGVAAGLWHTICI 367
            + T G G YGQ G G  D +L+     +      LL I      +I   A G  HT+ I
Sbjct: 303 EIFTCGRGSYGQLGHGDADPQLTLKKARALRHGCLLLHIVQLRDKKIIKAACGDTHTLVI 362

Query: 368 SSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
           S+ G+V+A+G  + GQLGTGG +    P  ++  SL  +    VSCG  H+A +
Sbjct: 363 STAGEVFAWGAAEDGQLGTGGTEGANSP--VELTSLRGL-VGDVSCGLVHSAAV 413


>gi|307106699|gb|EFN54944.1| hypothetical protein CHLNCDRAFT_134694 [Chlorella variabilis]
          Length = 434

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/247 (34%), Positives = 123/247 (49%), Gaps = 31/247 (12%)

Query: 225 TVAAGGRHTLALSD-IGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAAL 283
           +V  G  +++A++    QV+ WG+G  G+LG G  ++ V  P P+P +            
Sbjct: 66  SVHCGAEYSMAVAGGDKQVYSWGWGDFGRLGTGD-VKDVFIPCPLPAL------------ 112

Query: 284 SRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                          G  V  +ACG  H+ V T  G L  FG    GQCG GS  D L P
Sbjct: 113 --------------AGRRVASVACGDTHTLVATAEGQLFAFGRNQNGQCGLGSIQDCLEP 158

Query: 344 NCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSL 403
             V++L G ++  VA G  H++C++S+G+VY +G  ++G +G G  Q   LP L  A  L
Sbjct: 159 QLVTALQGKEVVAVACGAEHSMCVTSEGEVYCWGWGRYGNIGDGESQDRHLPTL--AKGL 216

Query: 404 ENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVA 463
           E V    V+CG RH+  + + G ++ WGW  Y QL  GD  D  +P +V     V   VA
Sbjct: 217 EGVKVAQVNCGWRHSIAVDEGGAMYTWGWGAYAQLMQGDRKDHYVPKRVEAVQQVA-TVA 275

Query: 464 CGWWHTL 470
            GW HT+
Sbjct: 276 GGWRHTM 282



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 81/271 (29%), Positives = 122/271 (45%), Gaps = 32/271 (11%)

Query: 203 SGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMV 262
           +GD      PC +    G R+A+VA G  HTL  +  GQ++ +G    GQ GLGS I+  
Sbjct: 97  TGDVKDVFIPCPLPALAGRRVASVACGDTHTLVATAEGQLFAFGRNQNGQCGLGS-IQDC 155

Query: 263 SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL 322
             P  +  ++                          G  V  +ACG  HS  +T  G + 
Sbjct: 156 LEPQLVTALQ--------------------------GKEVVAVACGAEHSMCVTSEGEVY 189

Query: 323 TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFG 382
            +GWG YG  G G + D   P     L G+++  V  G  H+I +   G +Y +G   + 
Sbjct: 190 CWGWGRYGNIGDGESQDRHLPTLAKGLEGVKVAQVNCGWRHSIAVDEGGAMYTWGWGAYA 249

Query: 383 QLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGD 442
           QL  G  +   +P+ ++A  ++ V   +V+ G RHT      G++F  GWNK+GQ G+G 
Sbjct: 250 QLMQGDRKDHYVPKRVEA--VQQV--ATVAGGWRHTMAADSQGRLFASGWNKFGQCGVGH 305

Query: 443 VIDRNIPSQV-TIEGCVPRNVACGWWHTLLL 472
             D     QV  + G     V  GW HT+ +
Sbjct: 306 NEDVVRVQQVEALAGERVVQVKSGWKHTMAV 336



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 68/282 (24%), Positives = 116/282 (41%), Gaps = 61/282 (21%)

Query: 47  RDVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEI----PEPFPLPTEAS- 99
           ++V    CG   +M ++   ++  WG            G++G I     +   LPT A  
Sbjct: 167 KEVVAVACGAEHSMCVTSEGEVYCWGW-----------GRYGNIGDGESQDRHLPTLAKG 215

Query: 100 -----IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSF 154
                + +   GW H +AV EGG +YTWGW         +  L  G        +R+  +
Sbjct: 216 LEGVKVAQVNCGWRHSIAVDEGGAMYTWGWG-------AYAQLMQG--------DRKDHY 260

Query: 155 LTEQVSPRSQVSRSSGG--TSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFP 212
           + ++V    QV+  +GG   +   D +G       R   S   +  +     +E++    
Sbjct: 261 VPKRVEAVQQVATVAGGWRHTMAADSQG-------RLFASGWNKFGQCGVGHNEDVVRVQ 313

Query: 213 CLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIE 272
            +  L  G R+  V +G +HT+A++  G+ + WG    GQLG      M  S  P+    
Sbjct: 314 QVEAL-AGERVVQVKSGWKHTMAVTHTGKFFSWGRNVNGQLGHSG---MQDSNSPVEL-- 367

Query: 273 SSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAV 314
                   AALSRG +N++    +     + G+A   R++ V
Sbjct: 368 --------AALSRGGINTDALTRQAQPVVLYGVAPSDRYAVV 401


>gi|301117542|ref|XP_002906499.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262107848|gb|EEY65900.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 1711

 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 123/254 (48%), Gaps = 30/254 (11%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           V+    + G  H +AL+D G  + WGY   GQLG  +    V  P  I  ++    K R 
Sbjct: 409 VKFIAASNGCEHMIALTDSGLAYSWGYNDRGQLGHENLTTKVHVPKLIESLKDK--KLRY 466

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
           A++S                          HSAVITD+G L  FG    GQ G   T  +
Sbjct: 467 ASVSY------------------------HHSAVITDSGELYAFGMNDCGQLGLDHTQHQ 502

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
            +P  V    G +I  VA GL+HTI  ++ G ++A G N +GQLG G ++   +  L+  
Sbjct: 503 STPQLVKGFEGTEISMVACGLYHTIICTATGGLFACGKNDYGQLGLGHNRQIKVASLV-- 560

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPR 460
            SL N     V+ G  H+ V+ + G+ F +G N YGQLG+G+ + +N+P+ V +      
Sbjct: 561 -SLPNEMVSYVASGYYHSVVVTNSGRTFSFGRNDYGQLGIGNKVHQNVPNVVALSANTRM 619

Query: 461 -NVACGWWHTLLLA 473
               CG +HT+LL+
Sbjct: 620 VRATCGCYHTVLLS 633



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 82/331 (24%), Positives = 128/331 (38%), Gaps = 49/331 (14%)

Query: 98  ASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLT- 156
              + A+ G  H +A+T+ G  Y+WG+ +    G    +L+T   + K +   +   L  
Sbjct: 409 VKFIAASNGCEHMIALTDSGLAYSWGYNDRGQLGH--ENLTTKVHVPKLIESLKDKKLRY 466

Query: 157 EQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVT 216
             VS       +  G          G+ G           T   S+         P LV 
Sbjct: 467 ASVSYHHSAVITDSGELYAFGMNDCGQLG--------LDHTQHQST---------PQLVK 509

Query: 217 LNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYG 276
              G  I+ VA G  HT+  +  G ++  G    GQLGLG   ++               
Sbjct: 510 GFEGTEISMVACGLYHTIICTATGGLFACGKNDYGQLGLGHNRQI--------------- 554

Query: 277 KDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGS 336
             + A+L             +P   V  +A G  HS V+T++G   +FG   YGQ G G+
Sbjct: 555 --KVASL-----------VSLPNEMVSYVASGYYHSVVVTNSGRTFSFGRNDYGQLGIGN 601

Query: 337 TDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPR 396
              +  PN V+     ++     G +HT+ +S  G V+ FG N  GQLG  G     LP 
Sbjct: 602 KVHQNVPNVVALSANTRMVRATCGCYHTVLLSEQGQVFVFGRNNKGQLGNRGSADALLPV 661

Query: 397 LLDA-PSLENVHSKSVSCGARHTAVIADDGK 426
            L   P   +     V+ G   T++I +  +
Sbjct: 662 PLKVRPEKNSRRCVDVAAGFYTTSLIVERKR 692



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 62/294 (21%), Positives = 117/294 (39%), Gaps = 51/294 (17%)

Query: 52  GGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAH 109
            GC   +A++DS    +WG  D   LG   +T+  H  +P+      +  +  A+  + H
Sbjct: 416 NGCEHMIALTDSGLAYSWGYNDRGQLGHENLTTKVH--VPKLIESLKDKKLRYASVSYHH 473

Query: 110 CVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSS 169
              +T+ GE+Y +G  +C   G       +   L K     + S +   +      + + 
Sbjct: 474 SAVITDSGELYAFGMNDCGQLGLDHTQHQSTPQLVKGFEGTEISMVACGLYHTIICTATG 533

Query: 170 GGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAG 229
           G  + G +  G    G   R+I +A                   LV+L P   ++ VA+G
Sbjct: 534 GLFACGKNDYGQLGLG-HNRQIKVAS------------------LVSL-PNEMVSYVASG 573

Query: 230 GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVN 289
             H++ +++ G+ + +G    GQLG+G+++        +P + +     R   + R +  
Sbjct: 574 YYHSVVVTNSGRTFSFGRNDYGQLGIGNKVH-----QNVPNVVALSANTR---MVRAT-- 623

Query: 290 SEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                            CG  H+ ++++ G +  FG    GQ G   + D L P
Sbjct: 624 -----------------CGCYHTVLLSEQGQVFVFGRNNKGQLGNRGSADALLP 660



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 3/158 (1%)

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
           +G L + G   YG+ G G   +      +S      I  VA+G      +++DG V   G
Sbjct: 320 SGELYSCGQNSYGELGTGDDIERHQLTSISLCGWDDIRQVASGNETLAVLTNDGVVLTCG 379

Query: 378 GNQFGQLGTGG-DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYG 436
            N+ GQ G G  D+   + R + A   + V   + S G  H   + D G  + WG+N  G
Sbjct: 380 LNKSGQCGQGHFDERVMMLRPVQALRSQRVKFIAASNGCEHMIALTDSGLAYSWGYNDRG 439

Query: 437 QLGLGDVIDR-NIPSQV-TIEGCVPRNVACGWWHTLLL 472
           QLG  ++  + ++P  + +++    R  +  + H+ ++
Sbjct: 440 QLGHENLTTKVHVPKLIESLKDKKLRYASVSYHHSAVI 477


>gi|281207411|gb|EFA81594.1| hypothetical protein PPL_05585 [Polysphondylium pallidum PN500]
          Length = 624

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 94/286 (32%), Positives = 142/286 (49%), Gaps = 40/286 (13%)

Query: 195 KQTA-ESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLA-LSDIGQVWGWGYGGEGQ 252
           KQT  E     + N+   P L+    G+ ++ +A G  H LA L +   V  WG    GQ
Sbjct: 113 KQTVDEDDDDSNFNIIKLPTLIK--QGLIVSMIACGDSHALAVLPNDATVLSWGCNRWGQ 170

Query: 253 LGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHS 312
           LGLG +   V+  HP P           + LS+       P F         +A G +HS
Sbjct: 171 LGLGDQ---VNRCHPTPI----------SGLSQSI-----PVF---------VAAGSQHS 203

Query: 313 AVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGD 372
            V++  G L +FG G +G+ G G+     +P  +S+L+G  I  VAAGL H+  + S G 
Sbjct: 204 FVLSKFGELFSFGCGTFGRLGHGNELPSFNPRPISTLVGKHIVSVAAGLMHSAAVDSQGA 263

Query: 373 VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGW 432
           +Y +G N++GQLG G  +  TLP       LE  +   V CG  HT V+  +G V+ +G+
Sbjct: 264 LYTWGWNRYGQLGLGTVKKHTLPN--KNKELERFNIVKVVCGKNHTLVLDVNGHVYSFGF 321

Query: 433 NKYGQLGLGDVIDRNIPSQVTIEGCVPRN-----VACGWWHTLLLA 473
           N  GQLG+G   D   P+++ ++  + +N     +A G++H LLL 
Sbjct: 322 NVCGQLGIGSYTDSIKPNRIDLD--LKQNDEIIDIAAGYYHVLLLT 365



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/238 (30%), Positives = 112/238 (47%), Gaps = 11/238 (4%)

Query: 239 IGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVP 298
            GQ++ WGY   GQ  L +     ++ +    ++          +         P     
Sbjct: 84  FGQLYSWGYNFYGQCALDNNHNHNNNNNNKQTVDEDDDDSNFNIIKL-------PTLIKQ 136

Query: 299 GNYVKGIACGGRHS-AVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGV 357
           G  V  IACG  H+ AV+ +   +L++G   +GQ G G   +   P  +S L       V
Sbjct: 137 GLIVSMIACGDSHALAVLPNDATVLSWGCNRWGQLGLGDQVNRCHPTPISGLSQSIPVFV 196

Query: 358 AAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARH 417
           AAG  H+  +S  G++++FG   FG+LG G +     PR +   +L   H  SV+ G  H
Sbjct: 197 AAGSQHSFVLSKFGELFSFGCGTFGRLGHGNELPSFNPRPI--STLVGKHIVSVAAGLMH 254

Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ-VTIEGCVPRNVACGWWHTLLLAV 474
           +A +   G ++ WGWN+YGQLGLG V    +P++   +E      V CG  HTL+L V
Sbjct: 255 SAAVDSQGALYTWGWNRYGQLGLGTVKKHTLPNKNKELERFNIVKVVCGKNHTLVLDV 312



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 109/291 (37%), Gaps = 62/291 (21%)

Query: 89  PEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGT----GLD 144
           P P        IV  AAG  H  AV   G +YTWGW         +G L  GT     L 
Sbjct: 234 PRPISTLVGKHIVSVAAGLMHSAAVDSQGALYTWGWNR-------YGQLGLGTVKKHTLP 286

Query: 145 KDVFERQSSFLTEQVSPRSQV--------SRSSGGTSSGTDGRGSGEEGSKRRRISL-AK 195
               E +   + + V  ++            S G    G  G GS  +  K  RI L  K
Sbjct: 287 NKNKELERFNIVKVVCGKNHTLVLDVNGHVYSFGFNVCGQLGIGSYTDSIKPNRIDLDLK 346

Query: 196 QTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGL 255
           Q  E                       I  +AAG  H L L+  G V+ +GY  +G LGL
Sbjct: 347 QNDE-----------------------IIDIAAGYYHVLLLTKKGCVYSFGYISDGALGL 383

Query: 256 GSRIRMVSSPHPIPCIESSYGKDRSAALSR---GSVNSE------GPGFRVP-------- 298
           G  +   S P  +P    ++  + S    +   G  NS+          ++P        
Sbjct: 384 GDVVGHQSRPKLMPFSHFNHEFNDSIDSYKEIYGEYNSDSENDINNNNAKLPPKVVELHN 443

Query: 299 --GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVS 347
             G+    IA GG HSA+IT +G L TFG G   + G    +D+  P  V+
Sbjct: 444 EIGDVAVKIAAGGWHSAIITSSGRLYTFGLGDNFRLGNNCQEDQDMPCIVN 494


>gi|66817532|ref|XP_642619.1| regulator of chromosome condensation  domain-containing protein
           [Dictyostelium discoideum AX4]
 gi|60470703|gb|EAL68677.1| regulator of chromosome condensation  domain-containing protein
           [Dictyostelium discoideum AX4]
          Length = 849

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 117/448 (26%), Positives = 199/448 (44%), Gaps = 68/448 (15%)

Query: 53  GCGFAMAISDSRKLITWGSTDD----LGQSYVTSGKHGEIPEPFPLPT--EASIVKAAAG 106
           G   ++A+S    + +WG + +    +GQ Y  S K   + +P  + +     I+K A G
Sbjct: 42  GEAHSLAVSRFGDVYSWGRSKEGQLGIGQGYGGSDKVMFVAKPTLIKSLQHERIIKVACG 101

Query: 107 WAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVS 166
             H +A+T+ G+VY WG    +   +   D+ +  GL       +   L+ Q    + VS
Sbjct: 102 NFHSLALTDMGKVYEWGQLHRLDESQSSLDIQSTNGL------IEMPRLSSQRIIEASVS 155

Query: 167 RSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGV----- 221
           +   G     D  G    G+K +     K+ + S+ S  ++L     ++ LN  +     
Sbjct: 156 QYLSGEKKAYDANG----GTKPKDDDEDKEASNSAQSKSKHLGK---IIDLNQTIPMQIQ 208

Query: 222 ----RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
                +  V+ G   + A++  G+++ WG+  +GQLGLG+R    S+P  +  +      
Sbjct: 209 DIPEEVVDVSGGWAFSAAVTKSGRLYTWGFNEKGQLGLGNR-WFHSTPQLVKTL------ 261

Query: 278 DRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST 337
                              +  N V  + CG +H   ITD G + ++G G++GQ G G+ 
Sbjct: 262 -------------------IDVNIV-SVVCGRQHICAITDQGEVYSWGLGVFGQLGHGNV 301

Query: 338 DDELSPNCVSSL--LGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT--------- 386
              L P  +     L  +I  VA G   T+  S  G +YAFG  ++GQLG+         
Sbjct: 302 KSYLHPKKIQQFVELNERIAQVACGSNFTMVRSVQGLLYAFGHGEYGQLGSTEETQHLDF 361

Query: 387 -GGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVID 445
            G D        +   SLE    K+V+CG  HT V+ D+ +V+ WGW   G LGLG+   
Sbjct: 362 GGRDNHFKYSIPIVVKSLETKKIKNVACGHLHTIVVTDENEVYQWGWGSSGALGLGNKRF 421

Query: 446 RNIPSQVT-IEGCVPRNVACGWWHTLLL 472
           + +P  +T + G    ++  G  HT+++
Sbjct: 422 QLVPQLITSLSGEEIASITAGEKHTIVV 449



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/247 (25%), Positives = 105/247 (42%), Gaps = 51/247 (20%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P LV     V I +V  G +H  A++D G+V+ WG G  GQLG G+   + S  HP    
Sbjct: 255 PQLVKTLIDVNIVSVVCGRQHICAITDQGEVYSWGLGVFGQLGHGN---VKSYLHPKKIQ 311

Query: 272 ESSYGKDRSAALSRGS-----------VNSEGPG------------------------FR 296
           +     +R A ++ GS           + + G G                        + 
Sbjct: 312 QFVELNERIAQVACGSNFTMVRSVQGLLYAFGHGEYGQLGSTEETQHLDFGGRDNHFKYS 371

Query: 297 VP-------GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSL 349
           +P          +K +ACG  H+ V+TD   +  +GWG  G  G G+   +L P  ++SL
Sbjct: 372 IPIVVKSLETKKIKNVACGHLHTIVVTDENEVYQWGWGSSGALGLGNKRFQLVPQLITSL 431

Query: 350 LGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSK 409
            G +I  + AG  HTI +    DV +F  + +  L      A+ + ++ D    + ++S 
Sbjct: 432 SGEEIASITAGEKHTIVVRC-SDVTSFAYD-YKSLINEKKYADLIFKVQD----KKIYSH 485

Query: 410 SVSCGAR 416
           S+   +R
Sbjct: 486 SLFIKSR 492



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 107/254 (42%), Gaps = 35/254 (13%)

Query: 35  VVRLPLTVGSAWRDV------CGGGCGFAMAISDSRKLITWGSTDD----LGQSYVTSGK 84
           ++ L  T+    +D+        GG  F+ A++ S +L TWG  +     LG  +  S  
Sbjct: 196 IIDLNQTIPMQIQDIPEEVVDVSGGWAFSAAVTKSGRLYTWGFNEKGQLGLGNRWFHST- 254

Query: 85  HGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLD 144
               P+      + +IV    G  H  A+T+ GEVY+WG         VFG L  G  + 
Sbjct: 255 ----PQLVKTLIDVNIVSVVCGRQHICAITDQGEVYSWGLG-------VFGQLGHG-NVK 302

Query: 145 KDVFERQSSFLTEQVSPRSQVSRSSGGTSSGT-----DGRGSGEEGSKRRRISLAKQTAE 199
             +  ++     E     +QV+  S  T   +        G GE G    ++   ++T  
Sbjct: 303 SYLHPKKIQQFVELNERIAQVACGSNFTMVRSVQGLLYAFGHGEYG----QLGSTEETQH 358

Query: 200 SSSSGDENLSAF--PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS 257
               G +N   +  P +V      +I  VA G  HT+ ++D  +V+ WG+G  G LGLG+
Sbjct: 359 LDFGGRDNHFKYSIPIVVKSLETKKIKNVACGHLHTIVVTDENEVYQWGWGSSGALGLGN 418

Query: 258 RIRMVSSPHPIPCI 271
           + R    P  I  +
Sbjct: 419 K-RFQLVPQLITSL 431



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 61/117 (52%), Gaps = 5/117 (4%)

Query: 320 ALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN 379
           ++L+ G    GQ G  S  + L P  +  LLG +I    +G  H++ +S  GDVY++G +
Sbjct: 2   SVLSVGQSKNGQLGHDSIKECLEPTVIEGLLGKRIIQTVSGEAHSLAVSRFGDVYSWGRS 61

Query: 380 QFGQLGT-----GGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWG 431
           + GQLG      G D+   + +     SL++     V+CG  H+  + D GKV+ WG
Sbjct: 62  KEGQLGIGQGYGGSDKVMFVAKPTLIKSLQHERIIKVACGNFHSLALTDMGKVYEWG 118



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 68/278 (24%), Positives = 111/278 (39%), Gaps = 64/278 (23%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS------RIRMVSSPHPIPCIES 273
           G RI    +G  H+LA+S  G V+ WG   EGQLG+G       ++  V+ P  I  ++ 
Sbjct: 33  GKRIIQTVSGEAHSLAVSRFGDVYSWGRSKEGQLGIGQGYGGSDKVMFVAKPTLIKSLQH 92

Query: 274 SYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCG 333
                                       +  +ACG  HS  +TD G +  + WG   +  
Sbjct: 93  E--------------------------RIIKVACGNFHSLALTDMGKV--YEWGQLHRLD 124

Query: 334 QG-STDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN------------- 379
           +  S+ D  S N +  +  +  + +      ++     G+  A+  N             
Sbjct: 125 ESQSSLDIQSTNGLIEMPRLSSQRIIEA---SVSQYLSGEKKAYDANGGTKPKDDDEDKE 181

Query: 380 -------QFGQLGTGGDQAETLP-RLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWG 431
                  +   LG   D  +T+P ++ D P  E V    VS G   +A +   G+++ WG
Sbjct: 182 ASNSAQSKSKHLGKIIDLNQTIPMQIQDIP--EEV--VDVSGGWAFSAAVTKSGRLYTWG 237

Query: 432 WNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWH 468
           +N+ GQLGLG+    + P  V T+      +V CG  H
Sbjct: 238 FNEKGQLGLGNRWFHSTPQLVKTLIDVNIVSVVCGRQH 275


>gi|325180681|emb|CCA15086.1| RCC1 and BTB domaincontaining protein putative [Albugo laibachii
           Nc14]
          Length = 554

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 108/398 (27%), Positives = 178/398 (44%), Gaps = 69/398 (17%)

Query: 88  IPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWK---EC-------VPSGRVFGDL 137
           +P P        I+  A G      + E G+V+T G+    +C       V S R+   L
Sbjct: 34  LPTPISFCHNVKILDVACGNEQTAFLFETGDVFTCGYNDSGQCGIGSTSRVQSLRLVPAL 93

Query: 138 STGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQT 197
            T     +D+   +S+   E ++    +SRS    + G + RG    GS           
Sbjct: 94  VT-----EDIAHIRSANGCEHLTA---ISRSGALYTFGFNSRGQLGHGSTN--------- 136

Query: 198 AESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS 257
             ++ +  ++L+++           +  VA    HT+ ++  G ++ +G    GQLG+  
Sbjct: 137 PITTPTKIKDLASY----------HVVEVACSYFHTIVMTMEGTLYAFGRNDLGQLGIDD 186

Query: 258 RIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITD 317
                             G DR   +     NS           V  +ACG  H+ V   
Sbjct: 187 ------------------GMDRHVPVPLTYFNSRP---------VLAVACGQHHTVVSLT 219

Query: 318 AGALLTFGWGLYGQCGQGST-DDELSPNCVSSLL-GIQIEGVAAGLWHTICISSDGDVYA 375
            G ++ FG   +GQ G G T D   SP+ +++ L  + +  +A G +HTI ++  G VY+
Sbjct: 220 NGGVVAFGKNDHGQLGTGYTLDYHASPSLLAAPLDSLVVPSLACGYYHTIALAEHGSVYS 279

Query: 376 FGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKY 435
           FG N +GQLG G     + P L+ A  L   H+  V+CG  HT V+++DGKV+ +G N +
Sbjct: 280 FGRNDYGQLGHGHRHHLSEPTLIKA--LAKTHAVQVTCGCYHTLVLSEDGKVYPFGRNNH 337

Query: 436 GQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLL 472
           GQLGLG++ID   P  + ++       VA G++H++ L
Sbjct: 338 GQLGLGNLIDCTSPQIIASLRDKFVVKVASGFYHSICL 375



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 94/296 (31%), Positives = 135/296 (45%), Gaps = 38/296 (12%)

Query: 211 FPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPC 270
            P  ++    V+I  VA G   T  L + G V+  GY   GQ G+GS  R V S   +P 
Sbjct: 34  LPTPISFCHNVKILDVACGNEQTAFLFETGDVFTCGYNDSGQCGIGSTSR-VQSLRLVPA 92

Query: 271 --------IESSYGKDRSAALSR-GSVNSEGPGFR-------------------VPGNYV 302
                   I S+ G +   A+SR G++ + G   R                   +   +V
Sbjct: 93  LVTEDIAHIRSANGCEHLTAISRSGALYTFGFNSRGQLGHGSTNPITTPTKIKDLASYHV 152

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
             +AC   H+ V+T  G L  FG    GQ G     D   P  ++      +  VA G  
Sbjct: 153 VEVACSYFHTIVMTMEGTLYAFGRNDLGQLGIDDGMDRHVPVPLTYFNSRPVLAVACGQH 212

Query: 363 HTICISSDGDVYAFGGNQFGQLGTGGD-QAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
           HT+   ++G V AFG N  GQLGTG        P LL AP L+++   S++CG  HT  +
Sbjct: 213 HTVVSLTNGGVVAFGKNDHGQLGTGYTLDYHASPSLLAAP-LDSLVVPSLACGYYHTIAL 271

Query: 422 ADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPR----NVACGWWHTLLLA 473
           A+ G V+ +G N YGQLG G    R+  S+ T+   + +     V CG +HTL+L+
Sbjct: 272 AEHGSVYSFGRNDYGQLGHGH---RHHLSEPTLIKALAKTHAVQVTCGCYHTLVLS 324



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 82/329 (24%), Positives = 133/329 (40%), Gaps = 65/329 (19%)

Query: 51  GGGCGFAMAISDSRKLITWG--STDDLGQSYVTSGKHGEIPEPFPLPTEAS--IVKAAAG 106
             GC    AIS S  L T+G  S   LG      G    I  P  +   AS  +V+ A  
Sbjct: 104 ANGCEHLTAISRSGALYTFGFNSRGQLGH-----GSTNPITTPTKIKDLASYHVVEVACS 158

Query: 107 WAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQV------S 160
           + H + +T  G +Y +G  +        G L    G+D+ V    + F +  V       
Sbjct: 159 YFHTIVMTMEGTLYAFGRND-------LGQLGIDDGMDRHVPVPLTYFNSRPVLAVACGQ 211

Query: 161 PRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPG 220
             + VS ++GG  +     G  + G      +L    + S       L A P        
Sbjct: 212 HHTVVSLTNGGVVA----FGKNDHGQLGTGYTLDYHASPS-------LLAAPL-----DS 255

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           + + ++A G  HT+AL++ G V+ +G    GQLG G R   +S P  I  +  ++     
Sbjct: 256 LVVPSLACGYYHTIALAEHGSVYSFGRNDYGQLGHGHR-HHLSEPTLIKALAKTHAVQ-- 312

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                   + CG  H+ V+++ G +  FG   +GQ G G+  D 
Sbjct: 313 ------------------------VTCGCYHTLVLSEDGKVYPFGRNNHGQLGLGNLIDC 348

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISS 369
            SP  ++SL    +  VA+G +H+IC+++
Sbjct: 349 TSPQIIASLRDKFVVKVASGFYHSICLTA 377



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 70/156 (44%), Gaps = 1/156 (0%)

Query: 323 TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFG 382
           +FG   YG+     T D   P  +S    ++I  VA G   T  +   GDV+  G N  G
Sbjct: 15  SFGQNSYGELCHNDTVDRTLPTPISFCHNVKILDVACGNEQTAFLFETGDVFTCGYNDSG 74

Query: 383 QLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGD 442
           Q G G        RL+ A   E++     + G  H   I+  G ++ +G+N  GQLG G 
Sbjct: 75  QCGIGSTSRVQSLRLVPALVTEDIAHIRSANGCEHLTAISRSGALYTFGFNSRGQLGHGS 134

Query: 443 VIDRNIPSQVT-IEGCVPRNVACGWWHTLLLAVPPT 477
                 P+++  +       VAC ++HT+++ +  T
Sbjct: 135 TNPITTPTKIKDLASYHVVEVACSYFHTIVMTMEGT 170



 Score = 45.1 bits (105), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 40/84 (47%), Gaps = 6/84 (7%)

Query: 374 YAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWN 433
           Y+FG N +G+L        TLP  +      NV    V+CG   TA + + G VF  G+N
Sbjct: 14  YSFGQNSYGELCHNDTVDRTLPTPISF--CHNVKILDVACGNEQTAFLFETGDVFTCGYN 71

Query: 434 KYGQLGLGDVID----RNIPSQVT 453
             GQ G+G        R +P+ VT
Sbjct: 72  DSGQCGIGSTSRVQSLRLVPALVT 95


>gi|66826123|ref|XP_646416.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
 gi|60474380|gb|EAL72317.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
          Length = 2044

 Score =  129 bits (323), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 118/415 (28%), Positives = 177/415 (42%), Gaps = 61/415 (14%)

Query: 57   AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTE--ASIVKAAAGWAHCVAVT 114
            A+ +  SR L+TWGS  +    +  + K    P P  LP      I   ++G  +   +T
Sbjct: 706  AIHLDTSRGLMTWGSASNCKLGFKVTAKDQSQPTPERLPNFNIPDICSISSGSYYSSVLT 765

Query: 115  EGGEVYTWGWKEC-VPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTS 173
            E G+VY WG      P+  + G           + + +   L  ++   S V   S G  
Sbjct: 766  ENGDVYLWGRGAVKTPAVPILG-----------IPQIEDQLLPFKLESLSDVVSVSIGFC 814

Query: 174  SGTDGRGSGEEGSKRRRISLAKQTAESSS--SGDENLSAFPCLVTLNPGVRIATVAAGGR 231
             G   R +GE         L     E+     GD N    P ++       I  V  G +
Sbjct: 815  HGAAVRANGE--------LLTWGVGENGQLGHGDTNNQIEPKIIQSLTSFWITQVQCGEK 866

Query: 232  HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
            HT+ L+  G+V+ WG    GQLGLG  +   SSP  +  +E                   
Sbjct: 867  HTICLTKNGKVYSWGASEYGQLGLGD-VTQHSSPMQVSALEKY----------------- 908

Query: 292  GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                      V  IA G  H AV+T +  +L FG G       G+      P  V SL  
Sbjct: 909  ---------NVLQIASGSTHCAVLTTSKEVLVFGNG----AAMGAASVVSLPTLVPSLKY 955

Query: 352  IQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSV 411
            + I+ +  G + T  I+  GDVY +G  Q  +LG GG+  ET P+L++A  L N   + +
Sbjct: 956  LHIDRLCCGHYSTAAITECGDVYTWGTGQ--ELGHGGNSTETSPKLIEA--LRNQSIRQI 1011

Query: 412  SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
            SCG RHTA + D G++F  G + +GQLG     D+N P ++ ++      +V+CG
Sbjct: 1012 SCGGRHTAFLTDSGRIFTCGKDSFGQLGQMSG-DQNKPKRIESLTKTTFISVSCG 1065


>gi|449016322|dbj|BAM79724.1| similar to UVB-resistance protein UVR8 [Cyanidioschyzon merolae
           strain 10D]
          Length = 457

 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 110/378 (29%), Positives = 167/378 (44%), Gaps = 57/378 (15%)

Query: 135 GDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGR------------GSG 182
           GD+   + L K V +R    ++++ +P   +  + GG+ +    R            G  
Sbjct: 38  GDIFQPSELPKIVLDR---LVSDRRTPNHVLQVACGGSHTAILLRNGALYTVGHGLYGQL 94

Query: 183 EEGSKRRRISLAKQTAESSSSGDENLSAF--PCLVTLNPGVRIATVAAGGRHTLALSDIG 240
             G + RR+SL   T      G E ++       V L P   I  VA G  HT A+S  G
Sbjct: 95  GLGQRIRRVSLP--TRVRGVLGPEAITNVGRSSAVALPP---IEAVACGRYHTFAVSSDG 149

Query: 241 QVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGN 300
           +++ WG G  G+LG G+ +R    P P+  ++              ++ SE         
Sbjct: 150 RLFSWGGGKNGRLGTGTELRSFL-PWPVSTVQEKVPGQPGNVRRSLAIPSE--------C 200

Query: 301 YVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVS-------SLLGIQ 353
            +  + CG  HS  ++  G + T GWG YGQ G GS +DE S   V+       +L  ++
Sbjct: 201 QIVAVECGYHHSVALSAIGVVYTCGWGAYGQLGHGSCNDEPSLLAVTFRDEHGNALPNLR 260

Query: 354 IEGVAAGLWHTICISSDGDVYAFGGNQFGQLG-------------TGGDQAETLPRLLDA 400
           I  VA+G  HT+ ++ DG +Y FG N++GQLG             T      + PRLL  
Sbjct: 261 IIKVASGDRHTLVLTDDGRIYGFGSNEYGQLGITMSCDQETAENPTSKQCVFSEPRLLTG 320

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVP- 459
            +L       ++CG RH+  ++D G+V CWG    GQLGLG+ I      Q+      P 
Sbjct: 321 GALAGRRIAQIACGERHSVALSDQGEVICWGHGMSGQLGLGESITMTPTPQILNTRNSPL 380

Query: 460 -----RNVACGWWHTLLL 472
                  +ACG  +TL L
Sbjct: 381 ASRRVTGIACGHENTLFL 398



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 96/360 (26%), Positives = 145/360 (40%), Gaps = 91/360 (25%)

Query: 100 IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQV 159
           I   A G  H  AV+  G +++WG       G   G L TGT L         SFL   V
Sbjct: 132 IEAVACGRYHTFAVSSDGRLFSWG-------GGKNGRLGTGTEL--------RSFLPWPV 176

Query: 160 SPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
           S   +              +  G+ G+ RR +++  +                       
Sbjct: 177 STVQE--------------KVPGQPGNVRRSLAIPSE----------------------- 199

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
             +I  V  G  H++ALS IG V+  G+G  GQLG GS            C       D 
Sbjct: 200 -CQIVAVECGYHHSVALSAIGVVYTCGWGAYGQLGHGS------------C------NDE 240

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ------CG 333
            + L+    +  G     P   +  +A G RH+ V+TD G +  FG   YGQ      C 
Sbjct: 241 PSLLAVTFRDEHGNAL--PNLRIIKVASGDRHTLVLTDDGRIYGFGSNEYGQLGITMSCD 298

Query: 334 QGSTDDELSPNCVSS---------LLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQL 384
           Q + ++  S  CV S         L G +I  +A G  H++ +S  G+V  +G    GQL
Sbjct: 299 QETAENPTSKQCVFSEPRLLTGGALAGRRIAQIACGERHSVALSDQGEVICWGHGMSGQL 358

Query: 385 GTGGDQAET-LPRLLDAPS--LENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
           G G     T  P++L+  +  L +     ++CG  +T  +  D +++  G  +YG LG+G
Sbjct: 359 GLGESITMTPTPQILNTRNSPLASRRVTGIACGHENTLFLVSDNEIYVTGSGEYGLLGIG 418



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 84/295 (28%), Positives = 126/295 (42%), Gaps = 45/295 (15%)

Query: 83  GKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTG 142
           G+ G +     +P+E  IV    G+ H VA++  G VYT GW         +G L  G+ 
Sbjct: 185 GQPGNVRRSLAIPSECQIVAVECGYHHSVALSAIGVVYTCGWG-------AYGQLGHGSC 237

Query: 143 LDKDVFERQSSFLTEQ--VSPRSQVSRSSGGTSSGT----DGR----GSGEEGSKRRRIS 192
            D+       +F  E     P  ++ + + G         DGR    GS E G     +S
Sbjct: 238 NDEPSL-LAVTFRDEHGNALPNLRIIKVASGDRHTLVLTDDGRIYGFGSNEYGQLGITMS 296

Query: 193 LAKQTAESSSSGDENLSAFPCLVT--LNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGE 250
             ++TAE+ +S  + + + P L+T     G RIA +A G RH++ALSD G+V  WG+G  
Sbjct: 297 CDQETAENPTS-KQCVFSEPRLLTGGALAGRRIAQIACGERHSVALSDQGEVICWGHGMS 355

Query: 251 GQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGR 310
           GQLGLG  I M  +P  +    S     R                      V GIACG  
Sbjct: 356 GQLGLGESITMTPTPQILNTRNSPLASRR----------------------VTGIACGHE 393

Query: 311 HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLL--GIQIEGVAAGLWH 363
           ++  +     +   G G YG  G G+    ++   V   L  G +++    G +H
Sbjct: 394 NTLFLVSDNEIYVTGSGEYGLLGIGAGAPRMAFEPVRVQLPPGFRVDRATMGHFH 448


>gi|225438323|ref|XP_002273073.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Vitis vinifera]
 gi|296082630|emb|CBI21635.3| unnamed protein product [Vitis vinifera]
          Length = 420

 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 90/279 (32%), Positives = 132/279 (47%), Gaps = 47/279 (16%)

Query: 205 DENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI-RMVS 263
           D+N +  P  V+  P  +I  +AAG  H+ A++  G+++ WG    GQLGLG +    VS
Sbjct: 103 DKNYTTEPLEVSALPK-KIIHIAAGYYHSAAITADGELYMWGKNSNGQLGLGKKAANAVS 161

Query: 264 SPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLT 323
            P  + C+                           G  +K +A G  HS   TD G  L+
Sbjct: 162 VPSKVECLN--------------------------GISIKMVALGSEHSVAATDQGEALS 195

Query: 324 FGWGLYGQCGQGS---------TDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVY 374
           +G G  G+ G G          T  E  P  +  L GI+++ VAAGL H+ CI  +G V+
Sbjct: 196 WGAGGSGRLGHGHESSLLGFFRTSSEYRPRLIRRLEGIKVKNVAAGLLHSACIDENGSVF 255

Query: 375 AFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNK 434
            FG     + G    +  T P ++     E  +SK V+CG  HT VI+  G++F WG N+
Sbjct: 256 IFGERAMDKFGFREAKNATAPSMIS----ELPYSKQVACGGYHTCVISSSGELFTWGSNE 311

Query: 435 YGQLGLGDVIDRNIPSQVTIEGCVPRN----VACGWWHT 469
            G LG+G +   + P +  IEG   +N    V+CGW HT
Sbjct: 312 NGCLGMGFMETIHFPER--IEGPFSKNPVSQVSCGWKHT 348



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 127/437 (29%), Positives = 189/437 (43%), Gaps = 63/437 (14%)

Query: 53  GCGFAMAISDS----RKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWA 108
           G GF   +S S    R    WG+  D G+  + S +    P         S+V  A G A
Sbjct: 18  GLGFCRRLSSSEPRKRFAALWGN-GDFGRLGLGSLESQWRPAVCSAFDHHSLVAIACGGA 76

Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRS 168
           H + +TE G VY  G  +       FG L  G  +DK+     +  L     P+  +  +
Sbjct: 77  HTLFLTESGCVYAAGLND-------FGQL--GVSVDKNY---TTEPLEVSALPKKIIHIA 124

Query: 169 SGGTSSG---TDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIAT 225
           +G   S     DG       +   ++ L K+ A        N  + P  V    G+ I  
Sbjct: 125 AGYYHSAAITADGELYMWGKNSNGQLGLGKKAA--------NAVSVPSKVECLNGISIKM 176

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
           VA G  H++A +D G+   WG GG G+LG G    ++             G  R+++  R
Sbjct: 177 VALGSEHSVAATDQGEALSWGAGGSGRLGHGHESSLL-------------GFFRTSSEYR 223

Query: 286 GSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNC 345
             +       R+ G  VK +A G  HSA I + G++  FG     + G     +  +P+ 
Sbjct: 224 PRLIR-----RLEGIKVKNVAAGLLHSACIDENGSVFIFGERAMDKFGFREAKNATAPSM 278

Query: 346 VSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLEN 405
           +S L     + VA G +HT  ISS G+++ +G N+ G LG G  +    P  ++ P  +N
Sbjct: 279 ISEL--PYSKQVACGGYHTCVISSSGELFTWGSNENGCLGMGFMETIHFPERIEGPFSKN 336

Query: 406 VHSKSVSCGARHTAVIADDGKVFCWGW------------NKYGQLGLGDVIDRNIPSQVT 453
             S+ VSCG +HTA I+ +G VF WGW            +  GQLG G  +D   P  V 
Sbjct: 337 PVSQ-VSCGWKHTAAIS-EGNVFTWGWGGSYGTFSDDGHSSGGQLGQGSDVDHIKPKMVE 394

Query: 454 IEGCV-PRNVACGWWHT 469
            E  V    V+CG+ HT
Sbjct: 395 FEESVRALQVSCGFNHT 411



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 104/233 (44%), Gaps = 14/233 (6%)

Query: 250 EGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE-GPGFRVPGNY--VKGIA 306
           + +LGLG   R +SS  P     + +G      L  GS+ S+  P      ++  +  IA
Sbjct: 14  QSKLGLG-FCRRLSSSEPRKRFAALWGNGDFGRLGLGSLESQWRPAVCSAFDHHSLVAIA 72

Query: 307 CGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC 366
           CGG H+  +T++G +   G   +GQ G     +  +     S L  +I  +AAG +H+  
Sbjct: 73  CGGAHTLFLTESGCVYAAGLNDFGQLGVSVDKNYTTEPLEVSALPKKIIHIAAGYYHSAA 132

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           I++DG++Y +G N  GQLG G   A  +        L  +  K V+ G+ H+    D G+
Sbjct: 133 ITADGELYMWGKNSNGQLGLGKKAANAVSVPSKVECLNGISIKMVALGSEHSVAATDQGE 192

Query: 427 VFCWGWNKYGQLGLGD---------VIDRNIPSQV-TIEGCVPRNVACGWWHT 469
              WG    G+LG G                P  +  +EG   +NVA G  H+
Sbjct: 193 ALSWGAGGSGRLGHGHESSLLGFFRTSSEYRPRLIRRLEGIKVKNVAAGLLHS 245


>gi|344293366|ref|XP_003418394.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Loxodonta
            africana]
          Length = 4858

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 86/244 (35%), Positives = 128/244 (52%), Gaps = 31/244 (12%)

Query: 232  HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
            H++AL++ G+V+ WG G  G+LG G+  R    P  I  ++                   
Sbjct: 4090 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQ------------------- 4129

Query: 292  GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                   G  V  ++CG +HSAV+T  G L TFG G YG+ G G+T ++  P  V++L G
Sbjct: 4130 -------GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4182

Query: 352  IQIEGVAAGLWHTICISSDGD-VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
             QI  VA GL HT+ +SSDG  V+AFG   +G+LG G   A++ P+ +D   L  +  K 
Sbjct: 4183 YQIGQVACGLNHTLAVSSDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDV--LCGIGIKK 4240

Query: 411  VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            V+CG + +  +  DG V+ +G ++   L  G   + N P Q+  + G V  +VA G  HT
Sbjct: 4241 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHT 4300

Query: 470  LLLA 473
            L LA
Sbjct: 4301 LALA 4304



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 112/233 (48%), Gaps = 36/233 (15%)

Query: 242  VWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNY 301
            V+ WG G  GQL    R  MV +                            P F    + 
Sbjct: 3996 VYLWGAGRHGQLAEAGRNVMVPAA--------------------------APSF----SQ 4025

Query: 302  VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
             + + CG   + VI   G +L  G G YG+ GQG++DD      +S+L G  +  +    
Sbjct: 4026 AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSC 4085

Query: 362  ---WHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
                H++ ++  G+V+++G   +G+LG G    +  PR ++A   E V    +SCG +H+
Sbjct: 4086 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEV--VQMSCGFKHS 4143

Query: 419  AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
            AV+  DGK+F +G   YG+LGLG+  ++ +P +VT +EG     VACG  HTL
Sbjct: 4144 AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTL 4196



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 164/393 (41%), Gaps = 75/393 (19%)

Query: 41   TVGSAWRDVCGGGCGFAMAISD--------SRKLITWGSTDDLGQSYVTSGKHGEIPEPF 92
            +   A + +CG  C F +  +         S   +  G++DDL    V S   G +    
Sbjct: 4022 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVV--- 4078

Query: 93   PLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQS 152
                   +V +     H +A+TE GEV++WG  +       +G L  G   D+    RQ 
Sbjct: 4079 -----TQLVTSCGSDGHSMALTESGEVFSWGDGD-------YGKLGHGNS-DRQRRPRQI 4125

Query: 153  SFLT-EQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDEN 207
              L  E+V   S   + S   +S  DG+    G+G+ G    R+ L          G+ +
Sbjct: 4126 EALQGEEVVQMSCGFKHSAVVTS--DGKLFTFGNGDYG----RLGL----------GNTS 4169

Query: 208  LSAFPCLVTLNPGVRIATVAAGGRHTLALSDIG-QVWGWGYGGEGQLGLGSRIRMVSSPH 266
                P  VT   G +I  VA G  HTLA+S  G  VW +G G  G+LGLG+     SSP 
Sbjct: 4170 NKKLPERVTALEGYQIGQVACGLNHTLAVSSDGSMVWAFGDGDYGKLGLGNSTAK-SSPQ 4228

Query: 267  PIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGW 326
             +  +                           G  +K +ACG + S  +T  G + TFG 
Sbjct: 4229 KVDVL--------------------------CGIGIKKVACGTQFSVALTKDGHVYTFGQ 4262

Query: 327  GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
                   +G   +   P  +  L G+ IE VA G  HT+ ++S GDVYA+G N  GQLG 
Sbjct: 4263 DRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL 4322

Query: 387  GGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            G       P L+     +NV  + +S G  H+A
Sbjct: 4323 GHTNHVREPTLVTVLQGKNV--RQISAGRCHSA 4353



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 94/174 (54%), Gaps = 5/174 (2%)

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
           + I  G   + VI+  G++   G G YG+ G G ++++ +   ++      I  V++   
Sbjct: 406 QTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIRKVSSSKG 465

Query: 363 ---HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
              HT+  +++G+V+++G   +G+LG G    +  P+L+  P L+      VS G RH+A
Sbjct: 466 SDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCVSAGYRHSA 524

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
            + +DG+++ WG   +G+LG GD   RNIP+ V     V   V+CG  HT+ L+
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG-EVSCGSSHTIALS 577



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 132/298 (44%), Gaps = 35/298 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAG---GRHTLALSDIGQVWGWGYGGEGQLGLGSRI- 259
           GD N  +    +T  P   I  V++      HTLA +  G+V+ WG G  G+LG G+   
Sbjct: 438 GDSNNQSTLKKLTFEPHRSIRKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSST 497

Query: 260 ----RMVSSP---HPIPCIESSY---------------GKDRSAALSRGSVNSEG-PGFR 296
               +++  P     + C+ + Y               G+     L  G  NS   P   
Sbjct: 498 QKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557

Query: 297 VPGNYVKGIACGGRHSAVITDAGALL-TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
              + V  ++CG  H+  ++  G  + +FG G  G+ G G T+    P  + +L G+ I 
Sbjct: 558 KDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIR 617

Query: 356 GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL-PRLLDAPSLENVHSKSVSCG 414
            V AG   ++ ++S G VYA+G      LG G  +A  L P+L++   L       +S G
Sbjct: 618 KVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE--ELAATRIVDISIG 673

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVI-DRNIPSQVT-IEGCVPRNVACGWWHTL 470
             H   ++ D +V+ WG N  GQ G G+       P +V+ ++G   + ++ G  H+L
Sbjct: 674 DSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 112/251 (44%), Gaps = 31/251 (12%)

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
           T+ AG   T  +S  G V   G G  G+LGLG       S +     + ++   RS    
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLG------DSNNQSTLKKLTFEPHRSIRKV 460

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN 344
             S  S+G                  H+   T  G + ++G G YG+ G G++  +  P 
Sbjct: 461 SSSKGSDG------------------HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPK 502

Query: 345 CVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSL 403
            +   L G  +  V+AG  H+  ++ DG++Y +G   FG+LG G   +  +P L+    +
Sbjct: 503 LIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK--DI 560

Query: 404 ENVHSKSVSCGARHTAVIADDGK-VFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRN 461
            NV    VSCG+ HT  ++ DG+ V+ +G    G+LG GD      P  +  ++G   R 
Sbjct: 561 SNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK 618

Query: 462 VACGWWHTLLL 472
           V  G   +L L
Sbjct: 619 VCAGSQSSLAL 629



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 130/324 (40%), Gaps = 67/324 (20%)

Query: 52  GGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVK-AAAGWA 108
           G  G  +A +   ++ +WG  D   LG    ++ K+   P+    P +  +V   +AG+ 
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY---PKLIQGPLQGKVVVCVSAGYR 521

Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRS 168
           H  AVTE GE+YTWG  +       FG L  G     D   R    L + +S   +VS  
Sbjct: 522 HSAAVTEDGELYTWGEGD-------FGRLGHG-----DSNSRNIPTLVKDISNVGEVSCG 569

Query: 169 SGGTSS-GTDGR-----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVR 222
           S  T +   DGR     G G+ G                  GD N    P ++    G+ 
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKL--------------GHGDTNRVYKPKVIEALQGMF 615

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V AG + +LAL+  GQV+ WG G    LG GS       P  I              
Sbjct: 616 IRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE------------- 660

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                         +    +  I+ G  H   ++    +  +G    GQCGQG++   ++
Sbjct: 661 -------------ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPIT 707

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTI 365
            P  VS L GI I+ ++AG  H++
Sbjct: 708 KPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 45.4 bits (106), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 4/89 (4%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           +S   +VY +G N   QL  G  +    P+L  APS  +  ++++  G   T VI+ DG 
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKL--APSFSD--AQTIEAGQYCTFVISTDGS 423

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
           V   G   YG+LGLGD  +++   ++T E
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFE 452


>gi|328784403|ref|XP_395217.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
           mellifera]
          Length = 1081

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/249 (34%), Positives = 122/249 (48%), Gaps = 30/249 (12%)

Query: 227 AAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRG 286
           A G  HTLA+++ GQ++ WG   EGQLGL S+  M SSP  +  + +S            
Sbjct: 117 ACGAYHTLAINEWGQLFSWGSNTEGQLGLNSKNFMESSPRMVKTLGTSV----------- 165

Query: 287 SVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGS-TDDELSPNC 345
                          V  IACG +H+  +T+ G L ++G    GQ G G+ T  E+ P  
Sbjct: 166 ---------------VVQIACGMKHAFALTNNGELYSWGSNSEGQLGLGTDTKYEIKPKF 210

Query: 346 VSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLEN 405
           +S+ +GI I  +A G +H+I IS  G V+ +G N FGQLG    Q   LP  L   +L+N
Sbjct: 211 ISAFIGIPIAFIACGGYHSIAISKSGAVFGWGKNTFGQLGLNDTQDRNLPCQLQ--TLQN 268

Query: 406 VHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVAC 464
                 +CG   +  +  DG VF  G   YGQLG G   +  +P QV  + G     ++C
Sbjct: 269 AKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNSNEILPRQVMELMGSTVTQISC 328

Query: 465 GWWHTLLLA 473
           G  HTL L 
Sbjct: 329 GKRHTLALV 337



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 115/390 (29%), Positives = 171/390 (43%), Gaps = 66/390 (16%)

Query: 60  ISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGG 117
           +   + +  WGST   +LG   +   ++  IP        A I + A G  + V +T+ G
Sbjct: 22  LHKKKDMFCWGSTIHGELGLGGI-EDENILIPRELDFKKAAEIQQIACGENYTVVITQIG 80

Query: 118 EVYTWGWKECVPSGRVFGD--LSTGTGLDKDVFERQS--SFLTEQVSPRSQVSRSSGGTS 173
           E+Y+ G  +    G   G   L    GLD  VF++ +  ++ T  ++   Q+  S G  +
Sbjct: 81  EIYSCGNNDYGQLGHEKGRKRLQLIPGLDAFVFKKAACGAYHTLAINEWGQLF-SWGSNT 139

Query: 174 SGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLV-TLNPGVRIATVAAGGRH 232
            G  G  S             K   ESS          P +V TL   V +  +A G +H
Sbjct: 140 EGQLGLNS-------------KNFMESS----------PRMVKTLGTSV-VVQIACGMKH 175

Query: 233 TLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEG 292
             AL++ G+++ WG   EGQLGLG+  +    P  I           SA +         
Sbjct: 176 AFALTNNGELYSWGSNSEGQLGLGTDTKYEIKPKFI-----------SAFIG-------- 216

Query: 293 PGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWG--LYGQCGQGSTDDELSPNCVSSLL 350
               +P   +  IACGG HS  I+ +GA+  FGWG   +GQ G   T D   P  + +L 
Sbjct: 217 ----IP---IAFIACGGYHSIAISKSGAV--FGWGKNTFGQLGLNDTQDRNLPCQLQTLQ 267

Query: 351 GIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
             +I   A G   ++ ++ DG V+  G   +GQLG G +  E LPR      L       
Sbjct: 268 NAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNSNEILPR--QVMELMGSTVTQ 325

Query: 411 VSCGARHT-AVIADDGKVFCWGWNKYGQLG 439
           +SCG RHT A++   G+V+ WG    GQLG
Sbjct: 326 ISCGKRHTLALVPSRGRVYAWGLGGAGQLG 355



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 125/273 (45%), Gaps = 35/273 (12%)

Query: 205 DENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSS 264
           DEN+   P  +       I  +A G  +T+ ++ IG+++  G    GQLG          
Sbjct: 46  DENI-LIPRELDFKKAAEIQQIACGENYTVVITQIGEIYSCGNNDYGQLG---------- 94

Query: 265 PHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTF 324
                      G+ R   +         PG  +     K  ACG  H+  I + G L ++
Sbjct: 95  --------HEKGRKRLQLI---------PG--LDAFVFKKAACGAYHTLAINEWGQLFSW 135

Query: 325 GWGLYGQCGQGSTD-DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQ 383
           G    GQ G  S +  E SP  V +L    +  +A G+ H   ++++G++Y++G N  GQ
Sbjct: 136 GSNTEGQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMKHAFALTNNGELYSWGSNSEGQ 195

Query: 384 LGTGGD-QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGD 442
           LG G D + E  P+ + A     +    ++CG  H+  I+  G VF WG N +GQLGL D
Sbjct: 196 LGLGTDTKYEIKPKFISA--FIGIPIAFIACGGYHSIAISKSGAVFGWGKNTFGQLGLND 253

Query: 443 VIDRNIPSQV-TIEGCVPRNVACGWWHTLLLAV 474
             DRN+P Q+ T++       ACG   ++ L V
Sbjct: 254 TQDRNLPCQLQTLQNAKICYAACGEEFSVFLTV 286



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/156 (32%), Positives = 78/156 (50%), Gaps = 10/156 (6%)

Query: 324 FGWG--LYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN 379
           F WG  ++G+ G G  +DE  L P  +      +I+ +A G  +T+ I+  G++Y+ G N
Sbjct: 29  FCWGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQIACGENYTVVITQIGEIYSCGNN 88

Query: 380 QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG 439
            +GQLG      +   RL   P L+    K  +CGA HT  I + G++F WG N  GQLG
Sbjct: 89  DYGQLG----HEKGRKRLQLIPGLDAFVFKKAACGAYHTLAINEWGQLFSWGSNTEGQLG 144

Query: 440 LG--DVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           L   + ++ +     T+   V   +ACG  H   L 
Sbjct: 145 LNSKNFMESSPRMVKTLGTSVVVQIACGMKHAFALT 180


>gi|291402886|ref|XP_002718216.1| PREDICTED: hect domain and RCC1-like domain 1 [Oryctolagus cuniculus]
          Length = 4860

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/244 (35%), Positives = 128/244 (52%), Gaps = 31/244 (12%)

Query: 232  HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
            H++AL++ G+V+ WG G  G+LG G+  R    P  I  ++                   
Sbjct: 4092 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQ------------------- 4131

Query: 292  GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                   G  V  ++CG +HSAV+T  G L TFG G YG+ G G+T ++  P  V++L G
Sbjct: 4132 -------GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4184

Query: 352  IQIEGVAAGLWHTICISSDGD-VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
             QI  VA GL HT+ +S+DG  V+AFG   +G+LG G   A++ P+ +D   L  +  K 
Sbjct: 4185 YQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDV--LCGIGIKK 4242

Query: 411  VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            V+CG + +  +  DG V+ +G ++   L  G   + N P QV  + G V  +VA G  HT
Sbjct: 4243 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHT 4302

Query: 470  LLLA 473
            L LA
Sbjct: 4303 LALA 4306



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 105/200 (52%), Gaps = 6/200 (3%)

Query: 275  YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
            +G  R   L+    N   P      +  + + CG   + VI   G +L  G G YG+ GQ
Sbjct: 4001 WGAGRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQ 4060

Query: 335  GSTDDELSPNCVSSLLGIQIEGVAAGL---WHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
            G++DD      +S+L G  +  +        H++ ++  G+V+++G   +G+LG G    
Sbjct: 4061 GNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDR 4120

Query: 392  ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
            +  PR ++A   E V    +SCG +H+AV+  DGK+F +G   YG+LGLG+  ++ +P +
Sbjct: 4121 QRRPRQIEALQGEEV--VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPER 4178

Query: 452  VT-IEGCVPRNVACGWWHTL 470
            VT +EG     VACG  HTL
Sbjct: 4179 VTALEGYQIGQVACGLNHTL 4198



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 164/393 (41%), Gaps = 75/393 (19%)

Query: 41   TVGSAWRDVCGGGCGFAMAISD--------SRKLITWGSTDDLGQSYVTSGKHGEIPEPF 92
            +   A + +CG  C F +  +         S   +  G++DDL    V S   G +    
Sbjct: 4024 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVV--- 4080

Query: 93   PLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQS 152
                   +V +     H +A+TE GEV++WG  +       +G L  G   D+    RQ 
Sbjct: 4081 -----TQLVTSCGSDGHSMALTESGEVFSWGDGD-------YGKLGHGNS-DRQRRPRQI 4127

Query: 153  SFLT-EQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDEN 207
              L  E+V   S   + S   +S  DG+    G+G+ G    R+ L          G+ +
Sbjct: 4128 EALQGEEVVQMSCGFKHSAVVTS--DGKLFTFGNGDYG----RLGL----------GNTS 4171

Query: 208  LSAFPCLVTLNPGVRIATVAAGGRHTLALS-DIGQVWGWGYGGEGQLGLGSRIRMVSSPH 266
                P  VT   G +I  VA G  HTLA+S D   VW +G G  G+LGLG+     SSP 
Sbjct: 4172 NKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK-SSPQ 4230

Query: 267  PIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGW 326
             +  +                           G  +K +ACG + S  +T  G + TFG 
Sbjct: 4231 KVDVL--------------------------CGIGIKKVACGTQFSVALTKDGHVYTFGQ 4264

Query: 327  GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
                   +G   +   P  V  L G+ IE VA G  HT+ ++S GDVYA+G N  GQLG 
Sbjct: 4265 DRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL 4324

Query: 387  GGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            G       P L+     +N+  + +S G  H+A
Sbjct: 4325 GHTNHVREPTLVTVLQGKNI--RQISAGRCHSA 4355



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 95/174 (54%), Gaps = 5/174 (2%)

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
           + I  G   + VI+  G++   G G YG+ G G ++++ +   ++      I+ V++   
Sbjct: 406 QTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKG 465

Query: 363 ---HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
              HT+  +++G+V+++G   +G+LG G    +  P+L+  P L+      VS G RH+A
Sbjct: 466 SDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCVSAGYRHSA 524

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
            + +DG+++ WG   +G+LG GD   RNIP+ V     V   V+CG  HT+ L+
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG-EVSCGSSHTIALS 577



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 132/298 (44%), Gaps = 35/298 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAG---GRHTLALSDIGQVWGWGYGGEGQLGLGSRI- 259
           GD N  +    +T  P   I  V++      HTLA +  G+V+ WG G  G+LG G+   
Sbjct: 438 GDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSST 497

Query: 260 ----RMVSSP---HPIPCIESSY---------------GKDRSAALSRGSVNSEG-PGFR 296
               +++  P     + C+ + Y               G+     L  G  NS   P   
Sbjct: 498 QKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557

Query: 297 VPGNYVKGIACGGRHSAVITDAGALL-TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
              + V  ++CG  H+  ++  G  + +FG G  G+ G G T+    P  + +L G+ I 
Sbjct: 558 KDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIR 617

Query: 356 GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL-PRLLDAPSLENVHSKSVSCG 414
            V AG   ++ ++S G VYA+G      LG G  +A  L P+L++   L       +S G
Sbjct: 618 KVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE--ELAATRIVDISIG 673

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVI-DRNIPSQVT-IEGCVPRNVACGWWHTL 470
             H   ++ D +V+ WG N  GQ G G+       P +V+ ++G   + ++ G  H+L
Sbjct: 674 DSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 112/251 (44%), Gaps = 31/251 (12%)

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
           T+ AG   T  +S  G V   G G  G+LGLG       S +     + ++   RS    
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLG------DSNNQSTLKKLTFEPHRSIKKV 460

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN 344
             S  S+G                  H+   T  G + ++G G YG+ G G++  +  P 
Sbjct: 461 SSSKGSDG------------------HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPK 502

Query: 345 CVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSL 403
            +   L G  +  V+AG  H+  ++ DG++Y +G   FG+LG G   +  +P L+    +
Sbjct: 503 LIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK--DI 560

Query: 404 ENVHSKSVSCGARHTAVIADDGK-VFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRN 461
            NV    VSCG+ HT  ++ DG+ V+ +G    G+LG GD      P  +  ++G   R 
Sbjct: 561 SNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK 618

Query: 462 VACGWWHTLLL 472
           V  G   +L L
Sbjct: 619 VCAGSQSSLAL 629



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 130/324 (40%), Gaps = 67/324 (20%)

Query: 52  GGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVK-AAAGWA 108
           G  G  +A +   ++ +WG  D   LG    ++ K+   P+    P +  +V   +AG+ 
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY---PKLIQGPLQGKVVVCVSAGYR 521

Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRS 168
           H  AVTE GE+YTWG  +       FG L  G     D   R    L + +S   +VS  
Sbjct: 522 HSAAVTEDGELYTWGEGD-------FGRLGHG-----DSNSRNIPTLVKDISNVGEVSCG 569

Query: 169 SGGTSS-GTDGR-----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVR 222
           S  T +   DGR     G G+ G                  GD N    P ++    G+ 
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKL--------------GHGDTNRVYKPKVIEALQGMF 615

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V AG + +LAL+  GQV+ WG G    LG GS       P  I              
Sbjct: 616 IRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE------------- 660

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                         +    +  I+ G  H   ++    +  +G    GQCGQG++   ++
Sbjct: 661 -------------ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPIT 707

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTI 365
            P  VS L GI I+ ++AG  H++
Sbjct: 708 KPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 45.4 bits (106), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 4/89 (4%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           +S   +VY +G N   QL  G  +    P+L  APS  +  ++++  G   T VI+ DG 
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKL--APSFSD--AQTIEAGQYCTFVISTDGS 423

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
           V   G   YG+LGLGD  +++   ++T E
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFE 452


>gi|296213415|ref|XP_002753260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1
            [Callithrix jacchus]
 gi|390468428|ref|XP_003733941.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 2
            [Callithrix jacchus]
          Length = 4860

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/244 (35%), Positives = 128/244 (52%), Gaps = 31/244 (12%)

Query: 232  HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
            H++AL++ G+V+ WG G  G+LG G+  R    P  I  ++                   
Sbjct: 4092 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQ------------------- 4131

Query: 292  GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                   G  V  ++CG +HSAV+T  G L TFG G YG+ G G+T ++  P  V++L G
Sbjct: 4132 -------GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4184

Query: 352  IQIEGVAAGLWHTICISSDGD-VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
             QI  VA GL HT+ +S+DG  V+AFG   +G+LG G   A++ P+ +D   L  +  K 
Sbjct: 4185 YQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDV--LCGIGIKK 4242

Query: 411  VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            V+CG + +  +  DG V+ +G ++   L  G   + N P QV  + G V  +VA G  HT
Sbjct: 4243 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHT 4302

Query: 470  LLLA 473
            L LA
Sbjct: 4303 LALA 4306



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 105/200 (52%), Gaps = 6/200 (3%)

Query: 275  YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
            +G  R   L+    N   P      +  + + CG   + VI   G +L  G G YG+ GQ
Sbjct: 4001 WGAGRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQ 4060

Query: 335  GSTDDELSPNCVSSLLGIQIEGVAAGL---WHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
            G++DD      +S+L G  +  +        H++ ++  G+V+++G   +G+LG G    
Sbjct: 4061 GNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDR 4120

Query: 392  ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
            +  PR ++A   E V    +SCG +H+AV+  DGK+F +G   YG+LGLG+  ++ +P +
Sbjct: 4121 QRRPRQIEALQGEEV--VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPER 4178

Query: 452  VT-IEGCVPRNVACGWWHTL 470
            VT +EG     VACG  HTL
Sbjct: 4179 VTALEGYQIGQVACGLNHTL 4198



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 113/393 (28%), Positives = 165/393 (41%), Gaps = 75/393 (19%)

Query: 41   TVGSAWRDVCGGGCGFAMAISD--------SRKLITWGSTDDLGQSYVTSGKHGEIPEPF 92
            +   A + +CG  C F +  +         S   +  G++DDL    V S   G +    
Sbjct: 4024 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVV--- 4080

Query: 93   PLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQS 152
                   +V +     H +A+TE GEV++WG  +       +G L  G   D+    RQ 
Sbjct: 4081 -----TQLVTSCGSDGHSMALTESGEVFSWGDGD-------YGKLGHGNS-DRQRRPRQI 4127

Query: 153  SFLT-EQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDEN 207
              L  E+V   S   + S   +S  DG+    G+G+ G    R+ L          G+ +
Sbjct: 4128 EALQGEEVVQMSCGFKHSAVVTS--DGKLFTFGNGDYG----RLGL----------GNTS 4171

Query: 208  LSAFPCLVTLNPGVRIATVAAGGRHTLALS-DIGQVWGWGYGGEGQLGLGSRIRMVSSPH 266
                P  VT   G +I  VA G  HTLA+S D   VW +G G  G+LGLG+     SSP 
Sbjct: 4172 NKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK-SSPQ 4230

Query: 267  PIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGW 326
             +  +                           G  +K +ACG + S  +T  G + TFG 
Sbjct: 4231 KVDVL--------------------------CGIGIKKVACGTQFSVALTKDGHVYTFGQ 4264

Query: 327  GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
                   +G   +   P  V  L G+ IE VA G  HT+ ++S+GDVYA+G N  GQLG 
Sbjct: 4265 DRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL 4324

Query: 387  GGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            G       P L+     +NV  + +S G  H+A
Sbjct: 4325 GHTNHVREPTLVTGLQGKNV--RQISAGRCHSA 4355



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 95/174 (54%), Gaps = 5/174 (2%)

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
           + I  G   + VI+  G++   G G YG+ G G ++++ +   ++      I+ V++   
Sbjct: 406 QTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKG 465

Query: 363 ---HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
              HT+  +++G+V+++G   +G+LG G    +  P+L+  P L+      VS G RH+A
Sbjct: 466 SDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCVSAGYRHSA 524

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
            + +DG+++ WG   +G+LG GD   RNIP+ V     V   V+CG  HT+ L+
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG-EVSCGSSHTIALS 577



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 132/298 (44%), Gaps = 35/298 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAG---GRHTLALSDIGQVWGWGYGGEGQLGLGSRI- 259
           GD N  +    +T  P   I  V++      HTLA +  G+V+ WG G  G+LG G+   
Sbjct: 438 GDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSST 497

Query: 260 ----RMVSSP---HPIPCIESSY---------------GKDRSAALSRGSVNSEG-PGFR 296
               +++  P     + C+ + Y               G+     L  G  NS   P   
Sbjct: 498 QKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557

Query: 297 VPGNYVKGIACGGRHSAVITDAGALL-TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
              + V  ++CG  H+  ++  G  + +FG G  G+ G G T+    P  + +L G+ I 
Sbjct: 558 KDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIR 617

Query: 356 GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL-PRLLDAPSLENVHSKSVSCG 414
            V AG   ++ ++S G VYA+G      LG G  +A  L P+L++   L       VS G
Sbjct: 618 KVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE--ELAATRIVDVSIG 673

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVI-DRNIPSQVT-IEGCVPRNVACGWWHTL 470
             H   ++ D +V+ WG N  GQ G G+       P +V+ ++G   + ++ G  H+L
Sbjct: 674 DSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 112/251 (44%), Gaps = 31/251 (12%)

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
           T+ AG   T  +S  G V   G G  G+LGLG       S +     + ++   RS    
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLG------DSNNQSTLKKLTFEPHRSIKKV 460

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN 344
             S  S+G                  H+   T  G + ++G G YG+ G G++  +  P 
Sbjct: 461 SSSKGSDG------------------HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPK 502

Query: 345 CVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSL 403
            +   L G  +  V+AG  H+  ++ DG++Y +G   FG+LG G   +  +P L+    +
Sbjct: 503 LIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK--DI 560

Query: 404 ENVHSKSVSCGARHTAVIADDGK-VFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRN 461
            NV    VSCG+ HT  ++ DG+ V+ +G    G+LG GD      P  +  ++G   R 
Sbjct: 561 SNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK 618

Query: 462 VACGWWHTLLL 472
           V  G   +L L
Sbjct: 619 VCAGSQSSLAL 629



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 86/324 (26%), Positives = 130/324 (40%), Gaps = 67/324 (20%)

Query: 52  GGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVK-AAAGWA 108
           G  G  +A +   ++ +WG  D   LG    ++ K+   P+    P +  +V   +AG+ 
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY---PKLIQGPLQGKVVVCVSAGYR 521

Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRS 168
           H  AVTE GE+YTWG  +       FG L  G     D   R    L + +S   +VS  
Sbjct: 522 HSAAVTEDGELYTWGEGD-------FGRLGHG-----DSNSRNIPTLVKDISNVGEVSCG 569

Query: 169 SGGTSS-GTDGR-----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVR 222
           S  T +   DGR     G G+ G                  GD N    P ++    G+ 
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKL--------------GHGDTNRVYKPKVIEALQGMF 615

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V AG + +LAL+  GQV+ WG G    LG GS       P  I              
Sbjct: 616 IRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE------------- 660

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                         +    +  ++ G  H   ++    +  +G    GQCGQG++   ++
Sbjct: 661 -------------ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPIT 707

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTI 365
            P  VS L GI I+ ++AG  H++
Sbjct: 708 KPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 45.4 bits (106), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 4/89 (4%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           +S   +VY +G N   QL  G  +    P+L  APS  +  ++++  G   T VI+ DG 
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKL--APSFSD--AQTIEAGQYCTFVISTDGS 423

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
           V   G   YG+LGLGD  +++   ++T E
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFE 452


>gi|338717875|ref|XP_001918080.2| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1-like [Equus caballus]
          Length = 4860

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 85/244 (34%), Positives = 128/244 (52%), Gaps = 31/244 (12%)

Query: 232  HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
            H++AL++ G+V+ WG G  G+LG G+  R    P  I  ++                   
Sbjct: 4092 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQ------------------- 4131

Query: 292  GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                   G  V  ++CG +HSAV+T  G L TFG G YG+ G G+T ++  P  V++L G
Sbjct: 4132 -------GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4184

Query: 352  IQIEGVAAGLWHTICISSDGD-VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
             QI  VA GL HT+ +S+DG  V+AFG   +G+LG G   A++ P+ +D   L  +  K 
Sbjct: 4185 YQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDV--LCGIGIKK 4242

Query: 411  VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            V+CG + +  +  DG V+ +G ++   L  G   + N P Q+  + G V  +VA G  HT
Sbjct: 4243 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHT 4302

Query: 470  LLLA 473
            L LA
Sbjct: 4303 LALA 4306



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 112/233 (48%), Gaps = 36/233 (15%)

Query: 242  VWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNY 301
            V+ WG G  GQL    R  MV +                            P F    + 
Sbjct: 3998 VYLWGAGRHGQLAEAGRNVMVPAA--------------------------APSF----SQ 4027

Query: 302  VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
             + + CG   + VI   G +L  G G YG+ GQG++DD      +S+L G  +  +    
Sbjct: 4028 AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSC 4087

Query: 362  ---WHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
                H++ ++  G+V+++G   +G+LG G    +  PR ++A   E V    +SCG +H+
Sbjct: 4088 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEV--VQMSCGFKHS 4145

Query: 419  AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
            AV+  DGK+F +G   YG+LGLG+  ++ +P +VT +EG     VACG  HTL
Sbjct: 4146 AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTL 4198



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 111/393 (28%), Positives = 165/393 (41%), Gaps = 75/393 (19%)

Query: 41   TVGSAWRDVCGGGCGFAMAISD--------SRKLITWGSTDDLGQSYVTSGKHGEIPEPF 92
            +   A + +CG  C F +  +         S   +  G++DDL    V S   G +    
Sbjct: 4024 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVV--- 4080

Query: 93   PLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQS 152
                   +V +     H +A+TE GEV++WG  +       +G L  G   D+    RQ 
Sbjct: 4081 -----TQLVTSCGSDGHSMALTESGEVFSWGDGD-------YGKLGHGNS-DRQRRPRQI 4127

Query: 153  SFLT-EQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDEN 207
              L  E+V   S   + S   +S  DG+    G+G+ G    R+ L          G+ +
Sbjct: 4128 EALQGEEVVQMSCGFKHSAVVTS--DGKLFTFGNGDYG----RLGL----------GNTS 4171

Query: 208  LSAFPCLVTLNPGVRIATVAAGGRHTLALS-DIGQVWGWGYGGEGQLGLGSRIRMVSSPH 266
                P  VT   G +I  VA G  HTLA+S D   VW +G G  G+LGLG+     SSP 
Sbjct: 4172 NKKLPERVTALEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNSTAK-SSPQ 4230

Query: 267  PIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGW 326
             +  +                           G  +K +ACG + S  +T  G + TFG 
Sbjct: 4231 KVDVL--------------------------CGIGIKKVACGTQFSVALTKDGHVYTFGQ 4264

Query: 327  GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
                   +G   +   P  +  L G+ IE VA G  HT+ ++S+GDVYA+G N  GQLG 
Sbjct: 4265 DRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL 4324

Query: 387  GGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            G       P L+     +N+  + +S G  H+A
Sbjct: 4325 GHTNHVREPTLVTVLQGKNI--RQISAGRCHSA 4355



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 95/174 (54%), Gaps = 5/174 (2%)

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
           + I  G   + VI+  G++   G G YG+ G G ++++ +   ++      I+ V++   
Sbjct: 406 QTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKG 465

Query: 363 ---HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
              HT+  +++G+V+++G   +G+LG G    +  P+L+  P L+      VS G RH+A
Sbjct: 466 SDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCVSAGYRHSA 524

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
            + +DG+++ WG   +G+LG GD   RNIP+ V     V   V+CG  HT+ L+
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG-EVSCGSSHTIALS 577



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 132/298 (44%), Gaps = 35/298 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAG---GRHTLALSDIGQVWGWGYGGEGQLGLGSRI- 259
           GD N  +    +T  P   I  V++      HTLA +  G+V+ WG G  G+LG G+   
Sbjct: 438 GDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSST 497

Query: 260 ----RMVSSP---HPIPCIESSY---------------GKDRSAALSRGSVNSEG-PGFR 296
               +++  P     + C+ + Y               G+     L  G  NS   P   
Sbjct: 498 QKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557

Query: 297 VPGNYVKGIACGGRHSAVITDAGALL-TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
              + V  ++CG  H+  ++  G  + +FG G  G+ G G T+    P  + +L G+ I 
Sbjct: 558 KDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIR 617

Query: 356 GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL-PRLLDAPSLENVHSKSVSCG 414
            V AG   ++ ++S G VYA+G      LG G  +A  L P+L++   L       +S G
Sbjct: 618 KVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLVE--ELAATRIVDISIG 673

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVI-DRNIPSQVT-IEGCVPRNVACGWWHTL 470
             H   ++ D +V+ WG N  GQ G G+       P +V+ ++G   + ++ G  H+L
Sbjct: 674 DSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 112/251 (44%), Gaps = 31/251 (12%)

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
           T+ AG   T  +S  G V   G G  G+LGLG       S +     + ++   RS    
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLG------DSNNQSTLKKLTFEPHRSIKKV 460

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN 344
             S  S+G                  H+   T  G + ++G G YG+ G G++  +  P 
Sbjct: 461 SSSKGSDG------------------HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPK 502

Query: 345 CVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSL 403
            +   L G  +  V+AG  H+  ++ DG++Y +G   FG+LG G   +  +P L+    +
Sbjct: 503 LIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK--DI 560

Query: 404 ENVHSKSVSCGARHTAVIADDGK-VFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRN 461
            NV    VSCG+ HT  ++ DG+ V+ +G    G+LG GD      P  +  ++G   R 
Sbjct: 561 SNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK 618

Query: 462 VACGWWHTLLL 472
           V  G   +L L
Sbjct: 619 VCAGSQSSLAL 629



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 89/324 (27%), Positives = 132/324 (40%), Gaps = 67/324 (20%)

Query: 52  GGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVK-AAAGWA 108
           G  G  +A +   ++ +WG  D   LG    ++ K+   P+    P +  +V   +AG+ 
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY---PKLIQGPLQGKVVVCVSAGYR 521

Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRS 168
           H  AVTE GE+YTWG  +       FG L  G     D   R    L + +S   +VS  
Sbjct: 522 HSAAVTEDGELYTWGEGD-------FGRLGHG-----DSNSRNIPTLVKDISNVGEVSCG 569

Query: 169 SGGTSS-GTDGR-----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVR 222
           S  T +   DGR     G G+ G                  GD N    P ++    G+ 
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKL--------------GHGDTNRVYKPKVIEALQGMF 615

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V AG + +LAL+  GQV+ WG G    LG GS                       A 
Sbjct: 616 IRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGS---------------------SEAT 652

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
             R  +  E    R     +  I+ G  H   ++    +  +G    GQCGQG++   ++
Sbjct: 653 ALRPKLVEELAATR-----IVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPIT 707

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTI 365
            P  VS L GI I+ ++AG  H++
Sbjct: 708 KPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 45.4 bits (106), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 4/89 (4%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           +S   +VY +G N   QL  G  +    P+L  APS  +  ++++  G   T VI+ DG 
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKL--APSFSD--AQTIEAGQYCTFVISTDGS 423

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
           V   G   YG+LGLGD  +++   ++T E
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFE 452


>gi|301756863|ref|XP_002914279.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
            [Ailuropoda melanoleuca]
          Length = 4861

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 85/244 (34%), Positives = 128/244 (52%), Gaps = 31/244 (12%)

Query: 232  HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
            H++AL++ G+V+ WG G  G+LG G+  R    P  I  ++                   
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQ------------------- 4132

Query: 292  GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                   G  V  ++CG +HSAV+T  G L TFG G YG+ G G+T ++  P  V++L G
Sbjct: 4133 -------GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4185

Query: 352  IQIEGVAAGLWHTICISSDGD-VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
             QI  VA GL HT+ +S+DG  V+AFG   +G+LG G   A++ P+ +D   L  +  K 
Sbjct: 4186 YQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDV--LCGIGIKK 4243

Query: 411  VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            V+CG + +  +  DG V+ +G ++   L  G   + N P Q+  + G V  +VA G  HT
Sbjct: 4244 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHT 4303

Query: 470  LLLA 473
            L LA
Sbjct: 4304 LALA 4307



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 112/233 (48%), Gaps = 36/233 (15%)

Query: 242  VWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNY 301
            V+ WG G  GQL    R  MV +                            P F    + 
Sbjct: 3999 VYLWGAGRHGQLAEAGRNVMVPAA--------------------------APSF----SQ 4028

Query: 302  VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
             + + CG   + VI   G +L  G G YG+ GQG++DD      +S+L G  +  +    
Sbjct: 4029 AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSC 4088

Query: 362  ---WHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
                H++ ++  G+V+++G   +G+LG G    +  PR ++A   E V    +SCG +H+
Sbjct: 4089 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEV--VQMSCGFKHS 4146

Query: 419  AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
            AV+  DGK+F +G   YG+LGLG+  ++ +P +VT +EG     VACG  HTL
Sbjct: 4147 AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTL 4199



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 164/393 (41%), Gaps = 75/393 (19%)

Query: 41   TVGSAWRDVCGGGCGFAMAISD--------SRKLITWGSTDDLGQSYVTSGKHGEIPEPF 92
            +   A + +CG  C F +  +         S   +  G++DDL    V S   G +    
Sbjct: 4025 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVV--- 4081

Query: 93   PLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQS 152
                   +V +     H +A+TE GEV++WG  +       +G L  G   D+    RQ 
Sbjct: 4082 -----TQLVTSCGSDGHSMALTESGEVFSWGDGD-------YGKLGHGNS-DRQRRPRQI 4128

Query: 153  SFLT-EQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDEN 207
              L  E+V   S   + S   +S  DG+    G+G+ G    R+ L          G+ +
Sbjct: 4129 EALQGEEVVQMSCGFKHSAVVTS--DGKLFTFGNGDYG----RLGL----------GNTS 4172

Query: 208  LSAFPCLVTLNPGVRIATVAAGGRHTLALS-DIGQVWGWGYGGEGQLGLGSRIRMVSSPH 266
                P  VT   G +I  VA G  HTLA+S D   VW +G G  G+LGLG+     SSP 
Sbjct: 4173 NKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK-SSPQ 4231

Query: 267  PIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGW 326
             +  +                           G  +K +ACG + S  +T  G + TFG 
Sbjct: 4232 KVDVL--------------------------CGIGIKKVACGTQFSVALTKDGHVYTFGQ 4265

Query: 327  GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
                   +G   +   P  +  L G+ IE VA G  HT+ ++S GDVYA+G N  GQLG 
Sbjct: 4266 DRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL 4325

Query: 387  GGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            G       P L+     +NV  + +S G  H+A
Sbjct: 4326 GHTNHVREPTLVTVLQGKNV--RQISAGRCHSA 4356



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 132/298 (44%), Gaps = 35/298 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAG---GRHTLALSDIGQVWGWGYGGEGQLGLGSRI- 259
           GD N  +    +T  P   I  V++      HTLA +  G+V+ WG G  G+LG G+   
Sbjct: 438 GDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSST 497

Query: 260 ----RMVSSP---HPIPCIESSY---------------GKDRSAALSRGSVNSEG-PGFR 296
               +++  P     + C+ + Y               G+     L  G  NS   P   
Sbjct: 498 QKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557

Query: 297 VPGNYVKGIACGGRHSAVITDAGALL-TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
              + V  ++CG  H+  ++  G  + +FG G  G+ G G T+    P  V +L G+ I 
Sbjct: 558 KDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIR 617

Query: 356 GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL-PRLLDAPSLENVHSKSVSCG 414
            V AG   ++ ++S G VYA+G      LG G  +A  L P+L++   L       +S G
Sbjct: 618 KVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE--ELAATRIVDISIG 673

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVI-DRNIPSQVT-IEGCVPRNVACGWWHTL 470
             H   ++ D +V+ WG N  GQ G G+       P +V+ ++G   + ++ G  H+L
Sbjct: 674 DSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 95/174 (54%), Gaps = 5/174 (2%)

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
           + I  G   + VI+  G++   G G YG+ G G ++++ +   ++      I+ V++   
Sbjct: 406 QTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKG 465

Query: 363 ---HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
              HT+  +++G+V+++G   +G+LG G    +  P+L+  P L+      VS G RH+A
Sbjct: 466 SDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCVSAGYRHSA 524

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
            + +DG+++ WG   +G+LG GD   RNIP+ V     V   V+CG  HT+ L+
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG-EVSCGSSHTIALS 577



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 112/251 (44%), Gaps = 31/251 (12%)

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
           T+ AG   T  +S  G V   G G  G+LGLG       S +     + ++   RS    
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLG------DSNNQSTLKKLTFEPHRSIKKV 460

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN 344
             S  S+G                  H+   T  G + ++G G YG+ G G++  +  P 
Sbjct: 461 SSSKGSDG------------------HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPK 502

Query: 345 CVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSL 403
            +   L G  +  V+AG  H+  ++ DG++Y +G   FG+LG G   +  +P L+    +
Sbjct: 503 LIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK--DI 560

Query: 404 ENVHSKSVSCGARHTAVIADDGK-VFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRN 461
            NV    VSCG+ HT  ++ DG+ V+ +G    G+LG GD      P  V  ++G   R 
Sbjct: 561 SNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRK 618

Query: 462 VACGWWHTLLL 472
           V  G   +L L
Sbjct: 619 VCAGSQSSLAL 629



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 88/324 (27%), Positives = 130/324 (40%), Gaps = 67/324 (20%)

Query: 52  GGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVK-AAAGWA 108
           G  G  +A +   ++ +WG  D   LG    ++ K+   P+    P +  +V   +AG+ 
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY---PKLIQGPLQGKVVVCVSAGYR 521

Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRS 168
           H  AVTE GE+YTWG  +       FG L  G     D   R    L + +S   +VS  
Sbjct: 522 HSAAVTEDGELYTWGEGD-------FGRLGHG-----DSNSRNIPTLVKDISNVGEVSCG 569

Query: 169 SGGTSS-GTDGR-----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVR 222
           S  T +   DGR     G G+ G                  GD N    P +V    G+ 
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKL--------------GHGDTNRVYKPKVVEALQGMF 615

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V AG + +LAL+  GQV+ WG G    LG GS       P  I              
Sbjct: 616 IRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE------------- 660

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                         +    +  I+ G  H   ++    +  +G    GQCGQG++   ++
Sbjct: 661 -------------ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPIT 707

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTI 365
            P  VS L GI I+ ++AG  H++
Sbjct: 708 KPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 45.4 bits (106), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 4/89 (4%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           +S   +VY +G N   QL  G  +    P+L  APS  +  ++++  G   T VI+ DG 
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKL--APSFSD--AQTIEAGQYCTFVISTDGS 423

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
           V   G   YG+LGLGD  +++   ++T E
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFE 452


>gi|281347310|gb|EFB22894.1| hypothetical protein PANDA_002155 [Ailuropoda melanoleuca]
          Length = 4871

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 85/244 (34%), Positives = 128/244 (52%), Gaps = 31/244 (12%)

Query: 232  HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
            H++AL++ G+V+ WG G  G+LG G+  R    P  I  ++                   
Sbjct: 4102 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQ------------------- 4141

Query: 292  GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                   G  V  ++CG +HSAV+T  G L TFG G YG+ G G+T ++  P  V++L G
Sbjct: 4142 -------GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4194

Query: 352  IQIEGVAAGLWHTICISSDGD-VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
             QI  VA GL HT+ +S+DG  V+AFG   +G+LG G   A++ P+ +D   L  +  K 
Sbjct: 4195 YQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDV--LCGIGIKK 4252

Query: 411  VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            V+CG + +  +  DG V+ +G ++   L  G   + N P Q+  + G V  +VA G  HT
Sbjct: 4253 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHT 4312

Query: 470  LLLA 473
            L LA
Sbjct: 4313 LALA 4316



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 105/200 (52%), Gaps = 6/200 (3%)

Query: 275  YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
            +G  R   L+    N   P      +  + + CG   + VI   G +L  G G YG+ GQ
Sbjct: 4011 WGAGRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQ 4070

Query: 335  GSTDDELSPNCVSSLLGIQIEGVAAGL---WHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
            G++DD      +S+L G  +  +        H++ ++  G+V+++G   +G+LG G    
Sbjct: 4071 GNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDR 4130

Query: 392  ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
            +  PR ++A   E V    +SCG +H+AV+  DGK+F +G   YG+LGLG+  ++ +P +
Sbjct: 4131 QRRPRQIEALQGEEV--VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPER 4188

Query: 452  VT-IEGCVPRNVACGWWHTL 470
            VT +EG     VACG  HTL
Sbjct: 4189 VTALEGYQIGQVACGLNHTL 4208



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 164/393 (41%), Gaps = 75/393 (19%)

Query: 41   TVGSAWRDVCGGGCGFAMAISD--------SRKLITWGSTDDLGQSYVTSGKHGEIPEPF 92
            +   A + +CG  C F +  +         S   +  G++DDL    V S   G +    
Sbjct: 4034 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVV--- 4090

Query: 93   PLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQS 152
                   +V +     H +A+TE GEV++WG  +       +G L  G   D+    RQ 
Sbjct: 4091 -----TQLVTSCGSDGHSMALTESGEVFSWGDGD-------YGKLGHGNS-DRQRRPRQI 4137

Query: 153  SFLT-EQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDEN 207
              L  E+V   S   + S   +S  DG+    G+G+ G    R+ L          G+ +
Sbjct: 4138 EALQGEEVVQMSCGFKHSAVVTS--DGKLFTFGNGDYG----RLGL----------GNTS 4181

Query: 208  LSAFPCLVTLNPGVRIATVAAGGRHTLALS-DIGQVWGWGYGGEGQLGLGSRIRMVSSPH 266
                P  VT   G +I  VA G  HTLA+S D   VW +G G  G+LGLG+     SSP 
Sbjct: 4182 NKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK-SSPQ 4240

Query: 267  PIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGW 326
             +  +                           G  +K +ACG + S  +T  G + TFG 
Sbjct: 4241 KVDVL--------------------------CGIGIKKVACGTQFSVALTKDGHVYTFGQ 4274

Query: 327  GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
                   +G   +   P  +  L G+ IE VA G  HT+ ++S GDVYA+G N  GQLG 
Sbjct: 4275 DRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL 4334

Query: 387  GGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            G       P L+     +NV  + +S G  H+A
Sbjct: 4335 GHTNHVREPTLVTVLQGKNV--RQISAGRCHSA 4365



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 132/298 (44%), Gaps = 35/298 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAG---GRHTLALSDIGQVWGWGYGGEGQLGLGSRI- 259
           GD N  +    +T  P   I  V++      HTLA +  G+V+ WG G  G+LG G+   
Sbjct: 438 GDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSST 497

Query: 260 ----RMVSSP---HPIPCIESSY---------------GKDRSAALSRGSVNSEG-PGFR 296
               +++  P     + C+ + Y               G+     L  G  NS   P   
Sbjct: 498 QKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557

Query: 297 VPGNYVKGIACGGRHSAVITDAGALL-TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
              + V  ++CG  H+  ++  G  + +FG G  G+ G G T+    P  V +L G+ I 
Sbjct: 558 KDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIR 617

Query: 356 GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL-PRLLDAPSLENVHSKSVSCG 414
            V AG   ++ ++S G VYA+G      LG G  +A  L P+L++   L       +S G
Sbjct: 618 KVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE--ELAATRIVDISIG 673

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVI-DRNIPSQVT-IEGCVPRNVACGWWHTL 470
             H   ++ D +V+ WG N  GQ G G+       P +V+ ++G   + ++ G  H+L
Sbjct: 674 DSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 95/174 (54%), Gaps = 5/174 (2%)

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
           + I  G   + VI+  G++   G G YG+ G G ++++ +   ++      I+ V++   
Sbjct: 406 QTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKG 465

Query: 363 ---HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
              HT+  +++G+V+++G   +G+LG G    +  P+L+  P L+      VS G RH+A
Sbjct: 466 SDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCVSAGYRHSA 524

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
            + +DG+++ WG   +G+LG GD   RNIP+ V     V   V+CG  HT+ L+
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG-EVSCGSSHTIALS 577



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 112/251 (44%), Gaps = 31/251 (12%)

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
           T+ AG   T  +S  G V   G G  G+LGLG       S +     + ++   RS    
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLG------DSNNQSTLKKLTFEPHRSIKKV 460

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN 344
             S  S+G                  H+   T  G + ++G G YG+ G G++  +  P 
Sbjct: 461 SSSKGSDG------------------HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPK 502

Query: 345 CVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSL 403
            +   L G  +  V+AG  H+  ++ DG++Y +G   FG+LG G   +  +P L+    +
Sbjct: 503 LIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK--DI 560

Query: 404 ENVHSKSVSCGARHTAVIADDGK-VFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRN 461
            NV    VSCG+ HT  ++ DG+ V+ +G    G+LG GD      P  V  ++G   R 
Sbjct: 561 SNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRK 618

Query: 462 VACGWWHTLLL 472
           V  G   +L L
Sbjct: 619 VCAGSQSSLAL 629



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 88/324 (27%), Positives = 130/324 (40%), Gaps = 67/324 (20%)

Query: 52  GGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVK-AAAGWA 108
           G  G  +A +   ++ +WG  D   LG    ++ K+   P+    P +  +V   +AG+ 
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY---PKLIQGPLQGKVVVCVSAGYR 521

Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRS 168
           H  AVTE GE+YTWG  +       FG L  G     D   R    L + +S   +VS  
Sbjct: 522 HSAAVTEDGELYTWGEGD-------FGRLGHG-----DSNSRNIPTLVKDISNVGEVSCG 569

Query: 169 SGGTSS-GTDGR-----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVR 222
           S  T +   DGR     G G+ G                  GD N    P +V    G+ 
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKL--------------GHGDTNRVYKPKVVEALQGMF 615

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V AG + +LAL+  GQV+ WG G    LG GS       P  I              
Sbjct: 616 IRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE------------- 660

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                         +    +  I+ G  H   ++    +  +G    GQCGQG++   ++
Sbjct: 661 -------------ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPIT 707

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTI 365
            P  VS L GI I+ ++AG  H++
Sbjct: 708 KPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 45.4 bits (106), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 4/89 (4%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           +S   +VY +G N   QL  G  +    P+L  APS  +  ++++  G   T VI+ DG 
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKL--APSFSD--AQTIEAGQYCTFVISTDGS 423

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
           V   G   YG+LGLGD  +++   ++T E
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFE 452


>gi|149042013|gb|EDL95854.1| rCG58270 [Rattus norvegicus]
          Length = 3507

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 85/244 (34%), Positives = 128/244 (52%), Gaps = 31/244 (12%)

Query: 232  HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
            H++AL++ G+V+ WG G  G+LG G+  R    P  I  ++                   
Sbjct: 2739 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQ------------------- 2778

Query: 292  GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                   G  V  ++CG +HSAV+T  G L TFG G YG+ G G+T ++  P  V++L G
Sbjct: 2779 -------GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 2831

Query: 352  IQIEGVAAGLWHTICISSDGD-VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
             QI  VA GL HT+ +S+DG  V+AFG   +G+LG G   A++ P+ +D   L  +  K 
Sbjct: 2832 YQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDV--LCGIGIKK 2889

Query: 411  VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            V+CG + +  +  DG V+ +G ++   L  G   + N P Q+  + G V  +VA G  HT
Sbjct: 2890 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHT 2949

Query: 470  LLLA 473
            L LA
Sbjct: 2950 LALA 2953



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 105/200 (52%), Gaps = 6/200 (3%)

Query: 275  YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
            +G  R   L+    N   P      +  + + CG   + VI   G +L  G G YG+ GQ
Sbjct: 2648 WGAGRHGQLAEAGRNVMVPATAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQ 2707

Query: 335  GSTDDELSPNCVSSLLGIQIEGVAAGL---WHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
            G++DD      +S+L G  +  +        H++ ++  G+V+++G   +G+LG G    
Sbjct: 2708 GNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDR 2767

Query: 392  ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
            +  PR ++A   E V    +SCG +H+AV+  DGK+F +G   YG+LGLG+  ++ +P +
Sbjct: 2768 QRRPRQIEALQGEEV--VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPER 2825

Query: 452  VT-IEGCVPRNVACGWWHTL 470
            VT +EG     VACG  HTL
Sbjct: 2826 VTALEGYQIGQVACGLNHTL 2845



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 115/401 (28%), Positives = 168/401 (41%), Gaps = 78/401 (19%)

Query: 36   VRLPLTVGS---AWRDVCGGGCGFAMAISD--------SRKLITWGSTDDLGQSYVTSGK 84
            V +P T  S   A + +CG  C F +  +         S   +  G++DDL    V S  
Sbjct: 2663 VMVPATAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISAL 2722

Query: 85   HGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLD 144
             G +           +V +     H +A+TE GEV++WG  +       +G L  G   D
Sbjct: 2723 QGFVV--------TQLVTSCGSDGHSMALTESGEVFSWGDGD-------YGKLGHGNS-D 2766

Query: 145  KDVFERQSSFLT-EQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAE 199
            +    RQ   L  E+V   S   + S   +S  DG+    G+G+ G    R+ L      
Sbjct: 2767 RQRRPRQIEALQGEEVVQMSCGFKHSAVVTS--DGKLFTFGNGDYG----RLGL------ 2814

Query: 200  SSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS-DIGQVWGWGYGGEGQLGLGSR 258
                G+ +    P  VT   G +I  VA G  HTLA+S D   VW +G G  G+LGLG+ 
Sbjct: 2815 ----GNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 2870

Query: 259  IRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDA 318
                SSP  +  +                           G  +K +ACG + S  +T  
Sbjct: 2871 TAK-SSPQKVDVL--------------------------CGIGIKKVACGTQFSVALTKD 2903

Query: 319  GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            G + TFG        +G   +   P  +  L G+ IE VA G  HT+ ++S GDVYA+G 
Sbjct: 2904 GHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGS 2963

Query: 379  NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            N  GQLG G       P L+     +N+  + +S G  H+A
Sbjct: 2964 NSEGQLGLGHTNHVREPTLVTVLQGKNI--RQISAGRCHSA 3002


>gi|417407155|gb|JAA50202.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
          Length = 4853

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 85/244 (34%), Positives = 128/244 (52%), Gaps = 31/244 (12%)

Query: 232  HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
            H++AL++ G+V+ WG G  G+LG G+  R    P  I  ++                   
Sbjct: 4085 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQ------------------- 4124

Query: 292  GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                   G  V  ++CG +HSAV+T  G L TFG G YG+ G G+T ++  P  V++L G
Sbjct: 4125 -------GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4177

Query: 352  IQIEGVAAGLWHTICISSDGD-VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
             QI  VA GL HT+ +S+DG  V+AFG   +G+LG G   A++ P+ +D   L  +  K 
Sbjct: 4178 YQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNSTAKSSPQKVDV--LCGIGIKK 4235

Query: 411  VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            V+CG + +  +  DG V+ +G ++   L  G   + N P Q+  + G V  +VA G  HT
Sbjct: 4236 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHT 4295

Query: 470  LLLA 473
            L LA
Sbjct: 4296 LALA 4299



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 105/200 (52%), Gaps = 6/200 (3%)

Query: 275  YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
            +G  R   L+    N   P      +  + + CG   + VI   G +L  G G YG+ GQ
Sbjct: 3994 WGAGRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQ 4053

Query: 335  GSTDDELSPNCVSSLLGIQIEGVAAGL---WHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
            G++DD      +S+L G  +  +        H++ ++  G+V+++G   +G+LG G    
Sbjct: 4054 GNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDR 4113

Query: 392  ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
            +  PR ++A   E V    +SCG +H+AV+  DGK+F +G   YG+LGLG+  ++ +P +
Sbjct: 4114 QRRPRQIEALQGEEV--VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPER 4171

Query: 452  VT-IEGCVPRNVACGWWHTL 470
            VT +EG     VACG  HTL
Sbjct: 4172 VTALEGYQIGQVACGLNHTL 4191



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 111/393 (28%), Positives = 164/393 (41%), Gaps = 75/393 (19%)

Query: 41   TVGSAWRDVCGGGCGFAMAISD--------SRKLITWGSTDDLGQSYVTSGKHGEIPEPF 92
            +   A + +CG  C F +  +         S   +  G++DDL    V S   G +    
Sbjct: 4017 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVV--- 4073

Query: 93   PLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQS 152
                   +V +     H +A+TE GEV++WG  +       +G L  G   D+    RQ 
Sbjct: 4074 -----TQLVTSCGSDGHSMALTESGEVFSWGDGD-------YGKLGHGNS-DRQRRPRQI 4120

Query: 153  SFLT-EQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDEN 207
              L  E+V   S   + S   +S  DG+    G+G+ G    R+ L          G+ +
Sbjct: 4121 EALQGEEVVQMSCGFKHSAVVTS--DGKLFTFGNGDYG----RLGL----------GNTS 4164

Query: 208  LSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQV-WGWGYGGEGQLGLGSRIRMVSSPH 266
                P  VT   G +I  VA G  HTLA+S  G V W +G G  G+LGLG+     SSP 
Sbjct: 4165 NKKLPERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNSTAK-SSPQ 4223

Query: 267  PIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGW 326
             +  +                           G  +K +ACG + S  +T  G + TFG 
Sbjct: 4224 KVDVL--------------------------CGIGIKKVACGTQFSVALTKDGHVYTFGQ 4257

Query: 327  GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
                   +G   +   P  +  L G+ IE VA G  HT+ ++S GDVYA+G N  GQLG 
Sbjct: 4258 DRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL 4317

Query: 387  GGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            G       P L+     +N+  + +S G  H+A
Sbjct: 4318 GHTNHVREPTLVTVLQGKNI--RQISAGRCHSA 4348



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 95/174 (54%), Gaps = 5/174 (2%)

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
           + I  G   + VI+  G++   G G YG+ G G ++++ +   ++      I+ V++   
Sbjct: 406 QTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKG 465

Query: 363 ---HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
              HT+  +++G+V+++G   +G+LG G    +  P+L+  P L+      VS G RH+A
Sbjct: 466 SDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCVSAGYRHSA 524

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
            + +DG+++ WG   +G+LG GD   RNIP+ V     V   V+CG  HT+ L+
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG-EVSCGSSHTIALS 577



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 132/298 (44%), Gaps = 35/298 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAG---GRHTLALSDIGQVWGWGYGGEGQLGLGSRI- 259
           GD N  +    +T  P   I  V++      HTLA +  G+V+ WG G  G+LG G+   
Sbjct: 438 GDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSST 497

Query: 260 ----RMVSSP---HPIPCIESSY---------------GKDRSAALSRGSVNSEG-PGFR 296
               +++  P     + C+ + Y               G+     L  G  NS   P   
Sbjct: 498 QKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557

Query: 297 VPGNYVKGIACGGRHSAVITDAGALL-TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
              + V  ++CG  H+  ++  G  + +FG G  G+ G G T+    P  + +L G+ I 
Sbjct: 558 KDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIR 617

Query: 356 GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL-PRLLDAPSLENVHSKSVSCG 414
            V AG   ++ ++S G VYA+G      LG G  +A  L P+L++   L       +S G
Sbjct: 618 KVCAGSQSSLSLTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE--ELAATRIVDISIG 673

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVI-DRNIPSQVT-IEGCVPRNVACGWWHTL 470
             H   ++ D +V+ WG N  GQ G G+       P +V+ ++G   + ++ G  H+L
Sbjct: 674 DSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 109/244 (44%), Gaps = 31/244 (12%)

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
           T+ AG   T  +S  G V   G G  G+LGLG       S +     + ++   RS    
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLG------DSNNQSTLKKLTFEPHRSIKKV 460

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN 344
             S  S+G                  H+   T  G + ++G G YG+ G G++  +  P 
Sbjct: 461 SSSKGSDG------------------HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPK 502

Query: 345 CVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSL 403
            +   L G  +  V+AG  H+  ++ DG++Y +G   FG+LG G   +  +P L+    +
Sbjct: 503 LIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK--DI 560

Query: 404 ENVHSKSVSCGARHTAVIADDGK-VFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRN 461
            NV    VSCG+ HT  ++ DG+ V+ +G    G+LG GD      P  +  ++G   R 
Sbjct: 561 SNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK 618

Query: 462 VACG 465
           V  G
Sbjct: 619 VCAG 622



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 86/324 (26%), Positives = 130/324 (40%), Gaps = 67/324 (20%)

Query: 52  GGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVK-AAAGWA 108
           G  G  +A +   ++ +WG  D   LG    ++ K+   P+    P +  +V   +AG+ 
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY---PKLIQGPLQGKVVVCVSAGYR 521

Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRS 168
           H  AVTE GE+YTWG  +       FG L  G     D   R    L + +S   +VS  
Sbjct: 522 HSAAVTEDGELYTWGEGD-------FGRLGHG-----DSNSRNIPTLVKDISNVGEVSCG 569

Query: 169 SGGTSS-GTDGR-----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVR 222
           S  T +   DGR     G G+ G                  GD N    P ++    G+ 
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKL--------------GHGDTNRVYKPKVIEALQGMF 615

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V AG + +L+L+  GQV+ WG G    LG GS       P  I              
Sbjct: 616 IRKVCAGSQSSLSLTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE------------- 660

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                         +    +  I+ G  H   ++    +  +G    GQCGQG++   ++
Sbjct: 661 -------------ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPIT 707

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTI 365
            P  VS L GI I+ ++AG  H++
Sbjct: 708 KPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 45.4 bits (106), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 4/89 (4%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           +S   +VY +G N   QL  G  +    P+L  APS  +  ++++  G   T VI+ DG 
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKL--APSFSD--AQTIEAGQYCTFVISTDGS 423

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
           V   G   YG+LGLGD  +++   ++T E
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFE 452


>gi|417407153|gb|JAA50201.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
          Length = 4846

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 85/244 (34%), Positives = 128/244 (52%), Gaps = 31/244 (12%)

Query: 232  HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
            H++AL++ G+V+ WG G  G+LG G+  R    P  I  ++                   
Sbjct: 4078 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQ------------------- 4117

Query: 292  GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                   G  V  ++CG +HSAV+T  G L TFG G YG+ G G+T ++  P  V++L G
Sbjct: 4118 -------GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4170

Query: 352  IQIEGVAAGLWHTICISSDGD-VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
             QI  VA GL HT+ +S+DG  V+AFG   +G+LG G   A++ P+ +D   L  +  K 
Sbjct: 4171 YQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNSTAKSSPQKVDV--LCGIGIKK 4228

Query: 411  VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            V+CG + +  +  DG V+ +G ++   L  G   + N P Q+  + G V  +VA G  HT
Sbjct: 4229 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHT 4288

Query: 470  LLLA 473
            L LA
Sbjct: 4289 LALA 4292



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 112/233 (48%), Gaps = 36/233 (15%)

Query: 242  VWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNY 301
            V+ WG G  GQL    R  MV +                            P F    + 
Sbjct: 3984 VYLWGAGRHGQLAEAGRNVMVPAA--------------------------APSF----SQ 4013

Query: 302  VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
             + + CG   + VI   G +L  G G YG+ GQG++DD      +S+L G  +  +    
Sbjct: 4014 AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSC 4073

Query: 362  ---WHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
                H++ ++  G+V+++G   +G+LG G    +  PR ++A   E V    +SCG +H+
Sbjct: 4074 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEV--VQMSCGFKHS 4131

Query: 419  AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
            AV+  DGK+F +G   YG+LGLG+  ++ +P +VT +EG     VACG  HTL
Sbjct: 4132 AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTL 4184



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 111/393 (28%), Positives = 164/393 (41%), Gaps = 75/393 (19%)

Query: 41   TVGSAWRDVCGGGCGFAMAISD--------SRKLITWGSTDDLGQSYVTSGKHGEIPEPF 92
            +   A + +CG  C F +  +         S   +  G++DDL    V S   G +    
Sbjct: 4010 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVV--- 4066

Query: 93   PLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQS 152
                   +V +     H +A+TE GEV++WG  +       +G L  G   D+    RQ 
Sbjct: 4067 -----TQLVTSCGSDGHSMALTESGEVFSWGDGD-------YGKLGHGNS-DRQRRPRQI 4113

Query: 153  SFLT-EQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDEN 207
              L  E+V   S   + S   +S  DG+    G+G+ G    R+ L          G+ +
Sbjct: 4114 EALQGEEVVQMSCGFKHSAVVTS--DGKLFTFGNGDYG----RLGL----------GNTS 4157

Query: 208  LSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQV-WGWGYGGEGQLGLGSRIRMVSSPH 266
                P  VT   G +I  VA G  HTLA+S  G V W +G G  G+LGLG+     SSP 
Sbjct: 4158 NKKLPERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNSTAK-SSPQ 4216

Query: 267  PIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGW 326
             +  +                           G  +K +ACG + S  +T  G + TFG 
Sbjct: 4217 KVDVL--------------------------CGIGIKKVACGTQFSVALTKDGHVYTFGQ 4250

Query: 327  GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
                   +G   +   P  +  L G+ IE VA G  HT+ ++S GDVYA+G N  GQLG 
Sbjct: 4251 DRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL 4310

Query: 387  GGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            G       P L+     +N+  + +S G  H+A
Sbjct: 4311 GHTNHVREPTLVTVLQGKNI--RQISAGRCHSA 4341



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 95/174 (54%), Gaps = 5/174 (2%)

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
           + I  G   + VI+  G++   G G YG+ G G ++++ +   ++      I+ V++   
Sbjct: 406 QTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKG 465

Query: 363 ---HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
              HT+  +++G+V+++G   +G+LG G    +  P+L+  P L+      VS G RH+A
Sbjct: 466 SDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCVSAGYRHSA 524

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
            + +DG+++ WG   +G+LG GD   RNIP+ V     V   V+CG  HT+ L+
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG-EVSCGSSHTIALS 577



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 132/298 (44%), Gaps = 35/298 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAG---GRHTLALSDIGQVWGWGYGGEGQLGLGSRI- 259
           GD N  +    +T  P   I  V++      HTLA +  G+V+ WG G  G+LG G+   
Sbjct: 438 GDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSST 497

Query: 260 ----RMVSSP---HPIPCIESSY---------------GKDRSAALSRGSVNSEG-PGFR 296
               +++  P     + C+ + Y               G+     L  G  NS   P   
Sbjct: 498 QKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557

Query: 297 VPGNYVKGIACGGRHSAVITDAGALL-TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
              + V  ++CG  H+  ++  G  + +FG G  G+ G G T+    P  + +L G+ I 
Sbjct: 558 KDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIR 617

Query: 356 GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL-PRLLDAPSLENVHSKSVSCG 414
            V AG   ++ ++S G VYA+G      LG G  +A  L P+L++   L       +S G
Sbjct: 618 KVCAGSQSSLSLTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE--ELAATRIVDISIG 673

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVI-DRNIPSQVT-IEGCVPRNVACGWWHTL 470
             H   ++ D +V+ WG N  GQ G G+       P +V+ ++G   + ++ G  H+L
Sbjct: 674 DSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 109/244 (44%), Gaps = 31/244 (12%)

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
           T+ AG   T  +S  G V   G G  G+LGLG       S +     + ++   RS    
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLG------DSNNQSTLKKLTFEPHRSIKKV 460

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN 344
             S  S+G                  H+   T  G + ++G G YG+ G G++  +  P 
Sbjct: 461 SSSKGSDG------------------HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPK 502

Query: 345 CVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSL 403
            +   L G  +  V+AG  H+  ++ DG++Y +G   FG+LG G   +  +P L+    +
Sbjct: 503 LIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK--DI 560

Query: 404 ENVHSKSVSCGARHTAVIADDGK-VFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRN 461
            NV    VSCG+ HT  ++ DG+ V+ +G    G+LG GD      P  +  ++G   R 
Sbjct: 561 SNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK 618

Query: 462 VACG 465
           V  G
Sbjct: 619 VCAG 622



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 86/324 (26%), Positives = 130/324 (40%), Gaps = 67/324 (20%)

Query: 52  GGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVK-AAAGWA 108
           G  G  +A +   ++ +WG  D   LG    ++ K+   P+    P +  +V   +AG+ 
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY---PKLIQGPLQGKVVVCVSAGYR 521

Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRS 168
           H  AVTE GE+YTWG  +       FG L  G     D   R    L + +S   +VS  
Sbjct: 522 HSAAVTEDGELYTWGEGD-------FGRLGHG-----DSNSRNIPTLVKDISNVGEVSCG 569

Query: 169 SGGTSS-GTDGR-----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVR 222
           S  T +   DGR     G G+ G                  GD N    P ++    G+ 
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKL--------------GHGDTNRVYKPKVIEALQGMF 615

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V AG + +L+L+  GQV+ WG G    LG GS       P  I              
Sbjct: 616 IRKVCAGSQSSLSLTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE------------- 660

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                         +    +  I+ G  H   ++    +  +G    GQCGQG++   ++
Sbjct: 661 -------------ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPIT 707

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTI 365
            P  VS L GI I+ ++AG  H++
Sbjct: 708 KPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 45.4 bits (106), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 4/89 (4%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           +S   +VY +G N   QL  G  +    P+L  APS  +  ++++  G   T VI+ DG 
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKL--APSFSD--AQTIEAGQYCTFVISTDGS 423

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
           V   G   YG+LGLGD  +++   ++T E
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFE 452


>gi|345795045|ref|XP_544717.3| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1 isoform 1 [Canis lupus familiaris]
          Length = 4861

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 85/244 (34%), Positives = 128/244 (52%), Gaps = 31/244 (12%)

Query: 232  HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
            H++AL++ G+V+ WG G  G+LG G+  R    P  I  ++                   
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQ------------------- 4132

Query: 292  GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                   G  V  ++CG +HSAV+T  G L TFG G YG+ G G+T ++  P  V++L G
Sbjct: 4133 -------GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4185

Query: 352  IQIEGVAAGLWHTICISSDGD-VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
             QI  VA GL HT+ +S+DG  V+AFG   +G+LG G   A++ P+ +D   L  +  K 
Sbjct: 4186 YQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDV--LCGIGIKK 4243

Query: 411  VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            V+CG + +  +  DG V+ +G ++   L  G   + N P Q+  + G V  +VA G  HT
Sbjct: 4244 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHT 4303

Query: 470  LLLA 473
            L LA
Sbjct: 4304 LALA 4307



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 112/233 (48%), Gaps = 36/233 (15%)

Query: 242  VWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNY 301
            V+ WG G  GQL    R  MV +                            P F    + 
Sbjct: 3999 VYLWGAGRHGQLAEAGRNVMVPAA--------------------------APSF----SQ 4028

Query: 302  VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
             + + CG   + VI   G +L  G G YG+ GQG++DD      +S+L G  +  +    
Sbjct: 4029 AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSC 4088

Query: 362  ---WHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
                H++ ++  G+V+++G   +G+LG G    +  PR ++A   E V    +SCG +H+
Sbjct: 4089 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEV--VQMSCGFKHS 4146

Query: 419  AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
            AV+  DGK+F +G   YG+LGLG+  ++ +P +VT +EG     VACG  HTL
Sbjct: 4147 AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTL 4199



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 111/393 (28%), Positives = 164/393 (41%), Gaps = 75/393 (19%)

Query: 41   TVGSAWRDVCGGGCGFAMAISD--------SRKLITWGSTDDLGQSYVTSGKHGEIPEPF 92
            +   A + +CG  C F +  +         S   +  G++DDL    V S   G +    
Sbjct: 4025 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVV--- 4081

Query: 93   PLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQS 152
                   +V +     H +A+TE GEV++WG  +       +G L  G   D+    RQ 
Sbjct: 4082 -----TQLVTSCGSDGHSMALTESGEVFSWGDGD-------YGKLGHGNS-DRQRRPRQI 4128

Query: 153  SFLT-EQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDEN 207
              L  E+V   S   + S   +S  DG+    G+G+ G    R+ L          G+ +
Sbjct: 4129 EALQGEEVVQMSCGFKHSAVVTS--DGKLFTFGNGDYG----RLGL----------GNTS 4172

Query: 208  LSAFPCLVTLNPGVRIATVAAGGRHTLALS-DIGQVWGWGYGGEGQLGLGSRIRMVSSPH 266
                P  VT   G +I  VA G  HTLA+S D   VW +G G  G+LGLG+     SSP 
Sbjct: 4173 NKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK-SSPQ 4231

Query: 267  PIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGW 326
             +  +                           G  +K +ACG + S  +T  G + TFG 
Sbjct: 4232 KVDVL--------------------------CGIGIKKVACGTQFSVALTKDGHVYTFGQ 4265

Query: 327  GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
                   +G   +   P  +  L G+ IE VA G  HT+ ++S GDVYA+G N  GQLG 
Sbjct: 4266 DRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL 4325

Query: 387  GGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            G       P L+     +N+  + +S G  H+A
Sbjct: 4326 GHTNHVREPTLVTVLQGKNI--RQISAGRCHSA 4356



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 98/184 (53%), Gaps = 5/184 (2%)

Query: 293 PGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGI 352
           P   +  +  + I  G   + VI+  G++   G G YG+ G G ++++ +   ++     
Sbjct: 396 PKMALSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHR 455

Query: 353 QIEGVAAGLW---HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSK 409
            I+ V++      HT+  +++G+V+++G   +G+LG G    +  P+L+  P L+     
Sbjct: 456 SIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVV 514

Query: 410 SVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHT 469
            VS G RH+A + +DG+++ WG   +G+LG GD   RNIP+ V     V   V+CG  HT
Sbjct: 515 CVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG-EVSCGSSHT 573

Query: 470 LLLA 473
           + L+
Sbjct: 574 IALS 577



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 130/298 (43%), Gaps = 35/298 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAG---GRHTLALSDIGQVWGWGYGGEGQLGLGSRI- 259
           GD N  +    +T  P   I  V++      HTLA +  G+V+ WG G  G+LG G+   
Sbjct: 438 GDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSST 497

Query: 260 ----RMVSSP---HPIPCIESSY---------------GKDRSAALSRGSVNSEG-PGFR 296
               +++  P     + C+ + Y               G+     L  G  NS   P   
Sbjct: 498 QKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557

Query: 297 VPGNYVKGIACGGRHSAVITDAGALL-TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
              + V  ++CG  H+  ++  G  + +FG G  G+ G G T+    P  V +L G+ I 
Sbjct: 558 KDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIR 617

Query: 356 GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL-PRLLDAPSLENVHSKSVSCG 414
            V AG   ++ ++S G VYA+G      LG G  +A  L P+L++   L       +S G
Sbjct: 618 KVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE--ELAATRIVDISIG 673

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVI-DRNIPSQVT-IEGCVPRNVACGWWHTL 470
                 +  D +V+ WG N  GQ G G+       P +V+ ++G   + ++ G  H+L
Sbjct: 674 DSXCLALRHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 112/251 (44%), Gaps = 31/251 (12%)

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
           T+ AG   T  +S  G V   G G  G+LGLG       S +     + ++   RS    
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLG------DSNNQSTLKKLTFEPHRSIKKV 460

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN 344
             S  S+G                  H+   T  G + ++G G YG+ G G++  +  P 
Sbjct: 461 SSSKGSDG------------------HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPK 502

Query: 345 CVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSL 403
            +   L G  +  V+AG  H+  ++ DG++Y +G   FG+LG G   +  +P L+    +
Sbjct: 503 LIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK--DI 560

Query: 404 ENVHSKSVSCGARHTAVIADDGK-VFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRN 461
            NV    VSCG+ HT  ++ DG+ V+ +G    G+LG GD      P  V  ++G   R 
Sbjct: 561 SNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRK 618

Query: 462 VACGWWHTLLL 472
           V  G   +L L
Sbjct: 619 VCAGSQSSLAL 629



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 128/324 (39%), Gaps = 67/324 (20%)

Query: 52  GGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVK-AAAGWA 108
           G  G  +A +   ++ +WG  D   LG    ++ K+   P+    P +  +V   +AG+ 
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY---PKLIQGPLQGKVVVCVSAGYR 521

Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRS 168
           H  AVTE GE+YTWG  +       FG L  G     D   R    L + +S   +VS  
Sbjct: 522 HSAAVTEDGELYTWGEGD-------FGRLGHG-----DSNSRNIPTLVKDISNVGEVSCG 569

Query: 169 SGGTSS-GTDGR-----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVR 222
           S  T +   DGR     G G+ G                  GD N    P +V    G+ 
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKL--------------GHGDTNRVYKPKVVEALQGMF 615

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V AG + +LAL+  GQV+ WG G    LG GS       P  I              
Sbjct: 616 IRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE------------- 660

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                         +    +  I+ G      +     +  +G    GQCGQG++   ++
Sbjct: 661 -------------ELAATRIVDISIGDSXCLALRHDNEVYAWGNNSMGQCGQGNSTGPIT 707

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTI 365
            P  VS L GI I+ ++AG  H++
Sbjct: 708 KPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 42.4 bits (98), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 4/89 (4%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           +S   +VY +G N   QL  G  +    P++    +L    ++++  G   T VI+ DG 
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKM----ALSFSDAQTIEAGQYCTFVISTDGS 423

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
           V   G   YG+LGLGD  +++   ++T E
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFE 452


>gi|403381060|ref|ZP_10923117.1| regulator of chromosome condensation rcc1, partial [Paenibacillus
           sp. JC66]
          Length = 851

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 91/272 (33%), Positives = 142/272 (52%), Gaps = 31/272 (11%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES----SYGKD 278
           I  +AAG  H+LAL+  G V+ +G+G  G+LG G+    +  P  I  +      + G  
Sbjct: 80  IQAIAAGTNHSLALTKSGDVYSFGFGLFGRLGHGNTDSQL-EPKKIEGLSDIQAIAAGDF 138

Query: 279 RSAALSR-GSVNSEGPGFRVPGN----------------YVKGIACGGRHSAVITDAGAL 321
            S AL++ G V S G G    G+                 V+ IA GG HS  +T +G +
Sbjct: 139 HSLALTKSGDVYSFGNGTSGLGHGNTEDQSTPKKIESLSDVQAIAAGGNHSLALTKSGDV 198

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
            +FG+GL+G+ G G TD +L P  +  L  IQ   +AAG  H++ ++  GDVY+FG    
Sbjct: 199 YSFGFGLFGRLGHGDTDSQLEPKKIEDLSDIQ--AIAAGGNHSLALTKSGDVYSFGWGLH 256

Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
           GQLG G  + +  P+ ++   L ++  ++V+ GA H+  +   G+V+ +G    GQLG G
Sbjct: 257 GQLGHGDTENQLTPKKIE--DLSDI--QAVAAGANHSLALTKSGEVYSFGRGNTGQLGHG 312

Query: 442 DVIDRNIPSQVTIEGCVP-RNVACGWWHTLLL 472
           D  D+  P +  IEG    + +A G +H+L L
Sbjct: 313 DTDDQLTPKK--IEGLKDIQAIAAGDFHSLAL 342



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 110/389 (28%), Positives = 179/389 (46%), Gaps = 85/389 (21%)

Query: 98  ASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDL---STGTGLDKDVFERQSS- 153
           + I   AAG  H +A+T+ G+VY++G+        +FG L   +T + L+    E  S  
Sbjct: 78  SDIQAIAAGTNHSLALTKSGDVYSFGFG-------LFGRLGHGNTDSQLEPKKIEGLSDI 130

Query: 154 -------FLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDE 206
                  F +  ++    V     GTS    G G+ E+ S  ++I              E
Sbjct: 131 QAIAAGDFHSLALTKSGDVYSFGNGTSGL--GHGNTEDQSTPKKI--------------E 174

Query: 207 NLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPH 266
           +LS             +  +AAGG H+LAL+  G V+ +G+G  G+LG G     +  P 
Sbjct: 175 SLS------------DVQAIAAGGNHSLALTKSGDVYSFGFGLFGRLGHGDTDSQLE-PK 221

Query: 267 PIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGW 326
            I  +                              ++ IA GG HS  +T +G + +FGW
Sbjct: 222 KIEDLSD----------------------------IQAIAAGGNHSLALTKSGDVYSFGW 253

Query: 327 GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
           GL+GQ G G T+++L+P  +  L  IQ   VAAG  H++ ++  G+VY+FG    GQLG 
Sbjct: 254 GLHGQLGHGDTENQLTPKKIEDLSDIQ--AVAAGANHSLALTKSGEVYSFGRGNTGQLGH 311

Query: 387 GGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR 446
           G    +  P+ ++   L+++  ++++ G  H+  +   G V+ +G    G LG GD  ++
Sbjct: 312 GDTDDQLTPKKIEG--LKDI--QAIAAGDFHSLALTKSGDVYSFGNGTSG-LGHGDTANQ 366

Query: 447 NIPSQVTIEGCVP-RNVACGWWHTLLLAV 474
             P +  IEG    + +A G  H+L LAV
Sbjct: 367 LEPKK--IEGLTDIQAIAAGANHSLALAV 393



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 86/153 (56%), Gaps = 8/153 (5%)

Query: 320 ALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN 379
           ++ +FG G+YG+ G G T ++L+P  +  L  IQ   +AAG  H++ ++  GDVY+FG  
Sbjct: 48  SVFSFGMGMYGKLGHGDTANQLAPKKIEGLSDIQ--AIAAGTNHSLALTKSGDVYSFGFG 105

Query: 380 QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG 439
            FG+LG G   ++  P+ ++   L ++  ++++ G  H+  +   G V+ +G    G LG
Sbjct: 106 LFGRLGHGNTDSQLEPKKIEG--LSDI--QAIAAGDFHSLALTKSGDVYSFGNGTSG-LG 160

Query: 440 LGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
            G+  D++ P ++     V + +A G  H+L L
Sbjct: 161 HGNTEDQSTPKKIESLSDV-QAIAAGGNHSLAL 192


>gi|426379401|ref|XP_004056386.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gorilla
            gorilla gorilla]
          Length = 4502

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 84/244 (34%), Positives = 128/244 (52%), Gaps = 31/244 (12%)

Query: 232  HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
            H++AL++ G+V+ WG G  G+LG G+  R    P  I  ++                   
Sbjct: 3734 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQ------------------- 3773

Query: 292  GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                   G  V  ++CG +HSAV+T  G L TFG G YG+ G G+T ++  P  V++L G
Sbjct: 3774 -------GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 3826

Query: 352  IQIEGVAAGLWHTICISSDGD-VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
             QI  VA GL HT+ +S+DG  V+AFG   +G+LG G   A++ P+ +D   L  +  K 
Sbjct: 3827 YQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDV--LCGIGIKK 3884

Query: 411  VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            V+CG + +  +  DG V+ +G ++   L  G   + N P Q+  + G +  +VA G  HT
Sbjct: 3885 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHT 3944

Query: 470  LLLA 473
            L LA
Sbjct: 3945 LALA 3948



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 105/200 (52%), Gaps = 6/200 (3%)

Query: 275  YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
            +G  R   L+    N   P      +  + + CG   + VI   G +L  G G YG+ GQ
Sbjct: 3643 WGAGRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQ 3702

Query: 335  GSTDDELSPNCVSSLLGIQIEGVAAGL---WHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
            G++DD      +S+L G  +  +        H++ ++  G+V+++G   +G+LG G    
Sbjct: 3703 GNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDR 3762

Query: 392  ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
            +  PR ++A   E V    +SCG +H+AV+  DGK+F +G   YG+LGLG+  ++ +P +
Sbjct: 3763 QRRPRQIEALQGEEV--VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPER 3820

Query: 452  VT-IEGCVPRNVACGWWHTL 470
            VT +EG     VACG  HTL
Sbjct: 3821 VTALEGYQIGQVACGLNHTL 3840



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 165/393 (41%), Gaps = 75/393 (19%)

Query: 41   TVGSAWRDVCGGGCGFAMAISD--------SRKLITWGSTDDLGQSYVTSGKHGEIPEPF 92
            +   A + +CG  C F +  +         S   +  G++DDL    V S   G +    
Sbjct: 3666 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVV--- 3722

Query: 93   PLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQS 152
                   +V +     H +A+TE GEV++WG  +       +G L  G   D+    RQ 
Sbjct: 3723 -----TQLVTSCGSDGHSMALTESGEVFSWGDGD-------YGKLGHGNS-DRQRRPRQI 3769

Query: 153  SFLT-EQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDEN 207
              L  E+V   S   + S   +S  DG+    G+G+ G    R+ L          G+ +
Sbjct: 3770 EALQGEEVVQMSCGFKHSAVVTS--DGKLFTFGNGDYG----RLGL----------GNTS 3813

Query: 208  LSAFPCLVTLNPGVRIATVAAGGRHTLALS-DIGQVWGWGYGGEGQLGLGSRIRMVSSPH 266
                P  VT   G +I  VA G  HTLA+S D   VW +G G  G+LGLG+     SSP 
Sbjct: 3814 NKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK-SSPQ 3872

Query: 267  PIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGW 326
             I  +                           G  +K +ACG + S  +T  G + TFG 
Sbjct: 3873 KIDVL--------------------------CGIGIKKVACGTQFSVALTKDGHVYTFGQ 3906

Query: 327  GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
                   +G   +   P  +  L G+ IE VA G  HT+ ++S+GDVYA+G N  GQLG 
Sbjct: 3907 DRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL 3966

Query: 387  GGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            G       P ++     +NV  + +S G  H+A
Sbjct: 3967 GHTNHVREPTVVTGLQGKNV--RQISAGRCHSA 3997



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 132/298 (44%), Gaps = 35/298 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAG---GRHTLALSDIGQVWGWGYGGEGQLGLGSRI- 259
           GD N  +    +T  P   I  V++      HTLA +  G+V+ WG G  G+LG G+   
Sbjct: 438 GDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSST 497

Query: 260 ----RMVSSP---HPIPCIESSY---------------GKDRSAALSRGSVNSEG-PGFR 296
               +++  P     + C+ + Y               G+     L  G  NS   P   
Sbjct: 498 QKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557

Query: 297 VPGNYVKGIACGGRHSAVITDAGALL-TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
              + V  ++CG  H+  ++  G  + +FG G  G+ G G T+    P  + +L G+ I 
Sbjct: 558 KDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIR 617

Query: 356 GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL-PRLLDAPSLENVHSKSVSCG 414
            V AG   ++ ++S G VYA+G      LG G  +A  L P+L++   L       VS G
Sbjct: 618 KVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE--ELAATRIVDVSIG 673

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVI-DRNIPSQVT-IEGCVPRNVACGWWHTL 470
             H   ++ D +V+ WG N  GQ G G+       P +V+ ++G   + ++ G  H+L
Sbjct: 674 DSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 95/174 (54%), Gaps = 5/174 (2%)

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
           + I  G   + VI+  G++   G G YG+ G G ++++ +   ++      I+ V++   
Sbjct: 406 QTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKG 465

Query: 363 ---HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
              HT+  +++G+V+++G   +G+LG G    +  P+L+  P L+      VS G RH+A
Sbjct: 466 SDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCVSAGYRHSA 524

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
            + +DG+++ WG   +G+LG GD   RNIP+ V     V   V+CG  HT+ L+
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG-EVSCGSSHTIALS 577



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 112/251 (44%), Gaps = 31/251 (12%)

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
           T+ AG   T  +S  G V   G G  G+LGLG       S +     + ++   RS    
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLG------DSNNQSTLKKLTFEPHRSIKKV 460

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN 344
             S  S+G                  H+   T  G + ++G G YG+ G G++  +  P 
Sbjct: 461 SSSKGSDG------------------HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPK 502

Query: 345 CVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSL 403
            +   L G  +  V+AG  H+  ++ DG++Y +G   FG+LG G   +  +P L+    +
Sbjct: 503 LIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK--DI 560

Query: 404 ENVHSKSVSCGARHTAVIADDGK-VFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRN 461
            NV    VSCG+ HT  ++ DG+ V+ +G    G+LG GD      P  +  ++G   R 
Sbjct: 561 SNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK 618

Query: 462 VACGWWHTLLL 472
           V  G   +L L
Sbjct: 619 VCAGSQSSLAL 629



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 66/263 (25%), Positives = 102/263 (38%), Gaps = 61/263 (23%)

Query: 52  GGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVK-AAAGWA 108
           G  G  +A +   ++ +WG  D   LG    ++ K+   P+    P +  +V   +AG+ 
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY---PKLIQGPLQGKVVVCVSAGYR 521

Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRS 168
           H  AVTE GE+YTWG  +       FG L  G     D   R    L + +S   +VS  
Sbjct: 522 HSAAVTEDGELYTWGEGD-------FGRLGHG-----DSNSRNIPTLVKDISNVGEVSCG 569

Query: 169 SGGTSS-GTDGR-------------GSGE-------------EGSKRRRISLAKQTAESS 201
           S  T +   DGR             G G+             +G   R++    Q++ + 
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLAL 629

Query: 202 SS----------------GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGW 245
           +S                  E  +  P L+      RI  V+ G  H LALS   +V+ W
Sbjct: 630 TSTGQVYAWGCGACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAW 689

Query: 246 GYGGEGQLGLGSRIRMVSSPHPI 268
           G    GQ G G+    ++ P  +
Sbjct: 690 GNNSMGQCGQGNSTGPITKPKKV 712



 Score = 45.8 bits (107), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 4/89 (4%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           +S   +VY +G N   QL  G  +    P+L  APS  +  ++++  G   T VI+ DG 
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKL--APSFSD--AQTIEAGQYCTFVISTDGS 423

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
           V   G   YG+LGLGD  +++   ++T E
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFE 452


>gi|350578534|ref|XP_001927286.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sus scrofa]
          Length = 4859

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 85/244 (34%), Positives = 128/244 (52%), Gaps = 31/244 (12%)

Query: 232  HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
            H++AL++ G+V+ WG G  G+LG G+  R    P  I  ++                   
Sbjct: 4091 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQ------------------- 4130

Query: 292  GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                   G  V  ++CG +HSAV+T  G L TFG G YG+ G G+T ++  P  V++L G
Sbjct: 4131 -------GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4183

Query: 352  IQIEGVAAGLWHTICISSDGD-VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
             QI  VA GL HT+ +S+DG  V+AFG   +G+LG G   A++ P+ +D   L  +  K 
Sbjct: 4184 YQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDV--LCGIGIKK 4241

Query: 411  VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            V+CG + +  +  DG V+ +G ++   L  G   + N P Q+  + G V  +VA G  HT
Sbjct: 4242 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHT 4301

Query: 470  LLLA 473
            L LA
Sbjct: 4302 LALA 4305



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 105/200 (52%), Gaps = 6/200 (3%)

Query: 275  YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
            +G  R   L+    N   P      +  + + CG   + VI   G +L  G G YG+ GQ
Sbjct: 4000 WGAGRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQ 4059

Query: 335  GSTDDELSPNCVSSLLGIQIEGVAAGL---WHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
            G++DD      +S+L G  +  +        H++ ++  G+V+++G   +G+LG G    
Sbjct: 4060 GNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDR 4119

Query: 392  ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
            +  PR ++A   E V    +SCG +H+AV+  DGK+F +G   YG+LGLG+  ++ +P +
Sbjct: 4120 QRRPRQIEALQGEEV--VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPER 4177

Query: 452  VT-IEGCVPRNVACGWWHTL 470
            VT +EG     VACG  HTL
Sbjct: 4178 VTALEGYQIGQVACGLNHTL 4197



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 164/393 (41%), Gaps = 75/393 (19%)

Query: 41   TVGSAWRDVCGGGCGFAMAISD--------SRKLITWGSTDDLGQSYVTSGKHGEIPEPF 92
            +   A + +CG  C F +  +         S   +  G++DDL    V S   G +    
Sbjct: 4023 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVV--- 4079

Query: 93   PLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQS 152
                   +V +     H +A+TE GEV++WG  +       +G L  G   D+    RQ 
Sbjct: 4080 -----TQLVTSCGSDGHSMALTESGEVFSWGDGD-------YGKLGHGNS-DRQRRPRQI 4126

Query: 153  SFLT-EQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDEN 207
              L  E+V   S   + S   +S  DG+    G+G+ G    R+ L          G+ +
Sbjct: 4127 EALQGEEVVQMSCGFKHSAVVTS--DGKLFTFGNGDYG----RLGL----------GNTS 4170

Query: 208  LSAFPCLVTLNPGVRIATVAAGGRHTLALS-DIGQVWGWGYGGEGQLGLGSRIRMVSSPH 266
                P  VT   G +I  VA G  HTLA+S D   VW +G G  G+LGLG+     SSP 
Sbjct: 4171 NKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK-SSPQ 4229

Query: 267  PIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGW 326
             +  +                           G  +K +ACG + S  +T  G + TFG 
Sbjct: 4230 KVDVL--------------------------CGIGIKKVACGTQFSVALTKDGHVYTFGQ 4263

Query: 327  GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
                   +G   +   P  +  L G+ IE VA G  HT+ ++S GDVYA+G N  GQLG 
Sbjct: 4264 DRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL 4323

Query: 387  GGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            G       P L+     +NV  + +S G  H+A
Sbjct: 4324 GHTNHVREPTLVTVLQGKNV--RQISAGRCHSA 4354



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 95/174 (54%), Gaps = 5/174 (2%)

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
           + I  G   + VI+  G++   G G YG+ G G ++++ +   ++      I+ V++   
Sbjct: 406 QTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKG 465

Query: 363 ---HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
              HT+  +++G+V+++G   +G+LG G    +  P+L+  P L+      VS G RH+A
Sbjct: 466 SDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCVSAGYRHSA 524

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
            + +DG+++ WG   +G+LG GD   RNIP+ V     V   V+CG  HT+ L+
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG-EVSCGSSHTIALS 577



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 132/298 (44%), Gaps = 35/298 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAG---GRHTLALSDIGQVWGWGYGGEGQLGLGSRI- 259
           GD N  +    +T  P   I  V++      HTLA +  G+V+ WG G  G+LG G+   
Sbjct: 438 GDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSST 497

Query: 260 ----RMVSSP---HPIPCIESSY---------------GKDRSAALSRGSVNSEG-PGFR 296
               +++  P     + C+ + Y               G+     L  G  NS   P   
Sbjct: 498 QKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557

Query: 297 VPGNYVKGIACGGRHSAVITDAGALL-TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
              + V  ++CG  H+  ++  G  + +FG G  G+ G G T+    P  + +L G+ I 
Sbjct: 558 KDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIR 617

Query: 356 GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL-PRLLDAPSLENVHSKSVSCG 414
            V AG   ++ ++S G VYA+G      LG G  +A  L P+L++   L       +S G
Sbjct: 618 KVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE--ELAATRIVDISIG 673

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVI-DRNIPSQVT-IEGCVPRNVACGWWHTL 470
             H   ++ D +V+ WG N  GQ G G+       P +V+ ++G   + ++ G  H+L
Sbjct: 674 DSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 112/251 (44%), Gaps = 31/251 (12%)

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
           T+ AG   T  +S  G V   G G  G+LGLG       S +     + ++   RS    
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLG------DSNNQSTLKKLTFEPHRSIKKV 460

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN 344
             S  S+G                  H+   T  G + ++G G YG+ G G++  +  P 
Sbjct: 461 SSSKGSDG------------------HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPK 502

Query: 345 CVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSL 403
            +   L G  +  V+AG  H+  ++ DG++Y +G   FG+LG G   +  +P L+    +
Sbjct: 503 LIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK--DI 560

Query: 404 ENVHSKSVSCGARHTAVIADDGK-VFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRN 461
            NV    VSCG+ HT  ++ DG+ V+ +G    G+LG GD      P  +  ++G   R 
Sbjct: 561 SNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK 618

Query: 462 VACGWWHTLLL 472
           V  G   +L L
Sbjct: 619 VCAGSQSSLAL 629



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 130/324 (40%), Gaps = 67/324 (20%)

Query: 52  GGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVK-AAAGWA 108
           G  G  +A +   ++ +WG  D   LG    ++ K+   P+    P +  +V   +AG+ 
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY---PKLIQGPLQGKVVVCVSAGYR 521

Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRS 168
           H  AVTE GE+YTWG  +       FG L  G     D   R    L + +S   +VS  
Sbjct: 522 HSAAVTEDGELYTWGEGD-------FGRLGHG-----DSNSRNIPTLVKDISNVGEVSCG 569

Query: 169 SGGTSS-GTDGR-----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVR 222
           S  T +   DGR     G G+ G                  GD N    P ++    G+ 
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKL--------------GHGDTNRVYKPKVIEALQGMF 615

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V AG + +LAL+  GQV+ WG G    LG GS       P  I              
Sbjct: 616 IRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE------------- 660

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                         +    +  I+ G  H   ++    +  +G    GQCGQG++   ++
Sbjct: 661 -------------ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPIT 707

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTI 365
            P  VS L GI I+ ++AG  H++
Sbjct: 708 KPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 45.4 bits (106), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 4/89 (4%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           +S   +VY +G N   QL  G  +    P+L  APS  +  ++++  G   T VI+ DG 
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKL--APSFSD--AQTIEAGQYCTFVISTDGS 423

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
           V   G   YG+LGLGD  +++   ++T E
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFE 452


>gi|426233168|ref|XP_004010589.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Ovis aries]
          Length = 4856

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 85/244 (34%), Positives = 128/244 (52%), Gaps = 31/244 (12%)

Query: 232  HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
            H++AL++ G+V+ WG G  G+LG G+  R    P  I  ++                   
Sbjct: 4088 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQ------------------- 4127

Query: 292  GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                   G  V  ++CG +HSAV+T  G L TFG G YG+ G G+T ++  P  V++L G
Sbjct: 4128 -------GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4180

Query: 352  IQIEGVAAGLWHTICISSDGD-VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
             QI  VA GL HT+ +S+DG  V+AFG   +G+LG G   A++ P+ +D   L  +  K 
Sbjct: 4181 YQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDV--LCGIGIKK 4238

Query: 411  VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            V+CG + +  +  DG V+ +G ++   L  G   + N P Q+  + G V  +VA G  HT
Sbjct: 4239 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHT 4298

Query: 470  LLLA 473
            L LA
Sbjct: 4299 LALA 4302



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 105/200 (52%), Gaps = 6/200 (3%)

Query: 275  YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
            +G  R   L+    N   P      +  + + CG   + VI   G +L  G G YG+ GQ
Sbjct: 3997 WGAGRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQ 4056

Query: 335  GSTDDELSPNCVSSLLGIQIEGVAAGL---WHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
            G++DD      +S+L G  +  +        H++ ++  G+V+++G   +G+LG G    
Sbjct: 4057 GNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDR 4116

Query: 392  ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
            +  PR ++A   E V    +SCG +H+AV+  DGK+F +G   YG+LGLG+  ++ +P +
Sbjct: 4117 QRRPRQIEALQGEEV--VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPER 4174

Query: 452  VT-IEGCVPRNVACGWWHTL 470
            VT +EG     VACG  HTL
Sbjct: 4175 VTALEGYQIGQVACGLNHTL 4194



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 164/393 (41%), Gaps = 75/393 (19%)

Query: 41   TVGSAWRDVCGGGCGFAMAISD--------SRKLITWGSTDDLGQSYVTSGKHGEIPEPF 92
            +   A + +CG  C F +  +         S   +  G++DDL    V S   G +    
Sbjct: 4020 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVV--- 4076

Query: 93   PLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQS 152
                   +V +     H +A+TE GEV++WG  +       +G L  G   D+    RQ 
Sbjct: 4077 -----TQLVTSCGSDGHSMALTESGEVFSWGDGD-------YGKLGHGNS-DRQRRPRQI 4123

Query: 153  SFLT-EQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDEN 207
              L  E+V   S   + S   +S  DG+    G+G+ G    R+ L          G+ +
Sbjct: 4124 EALQGEEVVQMSCGFKHSAVVTS--DGKLFTFGNGDYG----RLGL----------GNTS 4167

Query: 208  LSAFPCLVTLNPGVRIATVAAGGRHTLALS-DIGQVWGWGYGGEGQLGLGSRIRMVSSPH 266
                P  VT   G +I  VA G  HTLA+S D   VW +G G  G+LGLG+     SSP 
Sbjct: 4168 NKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK-SSPQ 4226

Query: 267  PIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGW 326
             +  +                           G  +K +ACG + S  +T  G + TFG 
Sbjct: 4227 KVDVL--------------------------CGIGIKKVACGTQFSVALTKDGHVYTFGQ 4260

Query: 327  GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
                   +G   +   P  +  L G+ IE VA G  HT+ ++S GDVYA+G N  GQLG 
Sbjct: 4261 DRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL 4320

Query: 387  GGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            G       P L+     +NV  + +S G  H+A
Sbjct: 4321 GHTNHVREPTLVTVLQGKNV--RQISAGRCHSA 4351



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 95/174 (54%), Gaps = 5/174 (2%)

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
           + I  G   + VI+  G++   G G YG+ G G ++++ +   ++      I+ V++   
Sbjct: 406 QTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKG 465

Query: 363 ---HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
              HT+  +++G+V+++G   +G+LG G    +  P+L+  P L+      VS G RH+A
Sbjct: 466 SDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCVSAGYRHSA 524

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
            + +DG+++ WG   +G+LG GD   RNIP+ V     V   V+CG  HT+ L+
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG-EVSCGSSHTIALS 577



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 132/298 (44%), Gaps = 35/298 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAG---GRHTLALSDIGQVWGWGYGGEGQLGLGSRI- 259
           GD N  +    +T  P   I  V++      HTLA +  G+V+ WG G  G+LG G+   
Sbjct: 438 GDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSST 497

Query: 260 ----RMVSSP---HPIPCIESSY---------------GKDRSAALSRGSVNSEG-PGFR 296
               +++  P     + C+ + Y               G+     L  G  NS   P   
Sbjct: 498 QKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557

Query: 297 VPGNYVKGIACGGRHSAVITDAGALL-TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
              + V  ++CG  H+  ++  G  + +FG G  G+ G G T+    P  + +L G+ I 
Sbjct: 558 KDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIR 617

Query: 356 GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL-PRLLDAPSLENVHSKSVSCG 414
            V AG   ++ ++S G VYA+G      LG G  +A  L P+L++   L       +S G
Sbjct: 618 KVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE--ELAATRIVDISIG 673

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVI-DRNIPSQVT-IEGCVPRNVACGWWHTL 470
             H   ++ D +V+ WG N  GQ G G+       P +V+ ++G   + ++ G  H+L
Sbjct: 674 DSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 112/251 (44%), Gaps = 31/251 (12%)

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
           T+ AG   T  +S  G V   G G  G+LGLG       S +     + ++   RS    
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLG------DSNNQSTLKKLTFEPHRSIKKV 460

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN 344
             S  S+G                  H+   T  G + ++G G YG+ G G++  +  P 
Sbjct: 461 SSSKGSDG------------------HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPK 502

Query: 345 CVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSL 403
            +   L G  +  V+AG  H+  ++ DG++Y +G   FG+LG G   +  +P L+    +
Sbjct: 503 LIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK--DI 560

Query: 404 ENVHSKSVSCGARHTAVIADDGK-VFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRN 461
            NV    VSCG+ HT  ++ DG+ V+ +G    G+LG GD      P  +  ++G   R 
Sbjct: 561 SNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK 618

Query: 462 VACGWWHTLLL 472
           V  G   +L L
Sbjct: 619 VCAGSQSSLAL 629



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 130/324 (40%), Gaps = 67/324 (20%)

Query: 52  GGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVK-AAAGWA 108
           G  G  +A +   ++ +WG  D   LG    ++ K+   P+    P +  +V   +AG+ 
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY---PKLIQGPLQGKVVVCVSAGYR 521

Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRS 168
           H  AVTE GE+YTWG  +       FG L  G     D   R    L + +S   +VS  
Sbjct: 522 HSAAVTEDGELYTWGEGD-------FGRLGHG-----DSNSRNIPTLVKDISNVGEVSCG 569

Query: 169 SGGTSS-GTDGR-----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVR 222
           S  T +   DGR     G G+ G                  GD N    P ++    G+ 
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKL--------------GHGDTNRVYKPKVIEALQGMF 615

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V AG + +LAL+  GQV+ WG G    LG GS       P  I              
Sbjct: 616 IRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE------------- 660

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                         +    +  I+ G  H   ++    +  +G    GQCGQG++   ++
Sbjct: 661 -------------ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPIT 707

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTI 365
            P  VS L GI I+ ++AG  H++
Sbjct: 708 KPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 45.8 bits (107), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 4/92 (4%)

Query: 364 TICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
           T  +S   +VY +G N   QL  G  +    P+L  APS  +  ++++  G   T VI+ 
Sbjct: 365 TPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKL--APSFSD--AQTIEAGQYCTFVIST 420

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
           DG V   G   YG+LGLGD  +++   ++T E
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFE 452


>gi|148908280|gb|ABR17254.1| unknown [Picea sitchensis]
          Length = 286

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 83/252 (32%), Positives = 126/252 (50%), Gaps = 34/252 (13%)

Query: 216 TLNPGVR--IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES 273
           T N G R  +  ++AG  HT+AL     V  WG G +GQLG G      +   P+P   S
Sbjct: 7   TRNDGQRRKVLLISAGASHTVALVAGNLVCSWGRGEDGQLGHGD-----AEDRPMPTFVS 61

Query: 274 SYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL-TFGWGLYGQC 332
           +                      + G  +  + CG  H+   +D+  ++ ++GWG +G+ 
Sbjct: 62  A----------------------LDGCEITSVICGADHTTAYSDSRLVVYSWGWGDFGRL 99

Query: 333 GQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAE 392
           G G++ D   P+ + +L G+QI+ +A G  H + ++ +G+V ++G NQ GQLG G +   
Sbjct: 100 GHGNSSDLFIPHAIKTLQGLQIKQIACGDSHCLAVTINGEVQSWGRNQNGQLGVGDNIDH 159

Query: 393 TLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
           + P+ +  P+ E V    VSCG RHT  I     VF WG    GQLG GD++DRN+P  V
Sbjct: 160 SFPQRVKLPAEEEV--VQVSCGWRHTVAITGKSNVFSWGRGTSGQLGHGDILDRNMP--V 215

Query: 453 TIEGCVPRNVAC 464
            IE       AC
Sbjct: 216 LIEALSVDGSAC 227



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/172 (34%), Positives = 89/172 (51%), Gaps = 8/172 (4%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           I+ G  H+  +     + ++G G  GQ G G  +D   P  VS+L G +I  V  G  HT
Sbjct: 19  ISAGASHTVALVAGNLVCSWGRGEDGQLGHGDAEDRPMPTFVSALDGCEITSVICGADHT 78

Query: 365 ICIS-SDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
              S S   VY++G   FG+LG G      +P  +   +L+ +  K ++CG  H   +  
Sbjct: 79  TAYSDSRLVVYSWGWGDFGRLGHGNSSDLFIPHAI--KTLQGLQIKQIACGDSHCLAVTI 136

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI---EGCVPRNVACGWWHTLLL 472
           +G+V  WG N+ GQLG+GD ID + P +V +   E  V   V+CGW HT+ +
Sbjct: 137 NGEVQSWGRNQNGQLGVGDNIDHSFPQRVKLPAEEEVV--QVSCGWRHTVAI 186



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 85/202 (42%), Gaps = 28/202 (13%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQ-VWGWGYGGEGQLGLGSRIRMV 262
           GD      P  V+   G  I +V  G  HT A SD    V+ WG+G  G+LG G+   + 
Sbjct: 49  GDAEDRPMPTFVSALDGCEITSVICGADHTTAYSDSRLVVYSWGWGDFGRLGHGNSSDLF 108

Query: 263 SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL 322
             PH I  ++                          G  +K IACG  H   +T  G + 
Sbjct: 109 -IPHAIKTLQ--------------------------GLQIKQIACGDSHCLAVTINGEVQ 141

Query: 323 TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFG 382
           ++G    GQ G G   D   P  V      ++  V+ G  HT+ I+   +V+++G    G
Sbjct: 142 SWGRNQNGQLGVGDNIDHSFPQRVKLPAEEEVVQVSCGWRHTVAITGKSNVFSWGRGTSG 201

Query: 383 QLGTGGDQAETLPRLLDAPSLE 404
           QLG G      +P L++A S++
Sbjct: 202 QLGHGDILDRNMPVLIEALSVD 223



 Score = 42.0 bits (97), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 1/71 (1%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
           G    +A++ + ++ +WG   + GQ  V        P+   LP E  +V+ + GW H VA
Sbjct: 127 GDSHCLAVTINGEVQSWGRNQN-GQLGVGDNIDHSFPQRVKLPAEEEVVQVSCGWRHTVA 185

Query: 113 VTEGGEVYTWG 123
           +T    V++WG
Sbjct: 186 ITGKSNVFSWG 196


>gi|410961060|ref|XP_003987103.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1 [Felis catus]
          Length = 4861

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 85/244 (34%), Positives = 128/244 (52%), Gaps = 31/244 (12%)

Query: 232  HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
            H++AL++ G+V+ WG G  G+LG G+  R    P  I  ++                   
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQ------------------- 4132

Query: 292  GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                   G  V  ++CG +HSAV+T  G L TFG G YG+ G G+T ++  P  V++L G
Sbjct: 4133 -------GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4185

Query: 352  IQIEGVAAGLWHTICISSDGD-VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
             QI  VA GL HT+ +S+DG  V+AFG   +G+LG G   A++ P+ +D   L  +  K 
Sbjct: 4186 YQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDV--LCGIGIKK 4243

Query: 411  VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            V+CG + +  +  DG V+ +G ++   L  G   + N P Q+  + G V  +VA G  HT
Sbjct: 4244 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHT 4303

Query: 470  LLLA 473
            L LA
Sbjct: 4304 LALA 4307



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 112/233 (48%), Gaps = 36/233 (15%)

Query: 242  VWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNY 301
            V+ WG G  GQL    R  MV +                            P F    + 
Sbjct: 3999 VYLWGAGRHGQLAEAGRNVMVPAA--------------------------APSF----SQ 4028

Query: 302  VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
             + + CG   + VI   G +L  G G YG+ GQG++DD      +S+L G  +  +    
Sbjct: 4029 AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSC 4088

Query: 362  ---WHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
                H++ ++  G+V+++G   +G+LG G    +  PR ++A   E V    +SCG +H+
Sbjct: 4089 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEV--VQMSCGFKHS 4146

Query: 419  AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
            AV+  DGK+F +G   YG+LGLG+  ++ +P +VT +EG     VACG  HTL
Sbjct: 4147 AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTL 4199



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 164/393 (41%), Gaps = 75/393 (19%)

Query: 41   TVGSAWRDVCGGGCGFAMAISD--------SRKLITWGSTDDLGQSYVTSGKHGEIPEPF 92
            +   A + +CG  C F +  +         S   +  G++DDL    V S   G +    
Sbjct: 4025 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVV--- 4081

Query: 93   PLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQS 152
                   +V +     H +A+TE GEV++WG  +       +G L  G   D+    RQ 
Sbjct: 4082 -----TQLVTSCGSDGHSMALTESGEVFSWGDGD-------YGKLGHGNS-DRQRRPRQI 4128

Query: 153  SFLT-EQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDEN 207
              L  E+V   S   + S   +S  DG+    G+G+ G    R+ L          G+ +
Sbjct: 4129 EALQGEEVVQMSCGFKHSAVVTS--DGKLFTFGNGDYG----RLGL----------GNTS 4172

Query: 208  LSAFPCLVTLNPGVRIATVAAGGRHTLALS-DIGQVWGWGYGGEGQLGLGSRIRMVSSPH 266
                P  VT   G +I  VA G  HTLA+S D   VW +G G  G+LGLG+     SSP 
Sbjct: 4173 NKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK-SSPQ 4231

Query: 267  PIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGW 326
             +  +                           G  +K +ACG + S  +T  G + TFG 
Sbjct: 4232 KVDVL--------------------------CGIGIKKVACGTQFSVALTKDGHVYTFGQ 4265

Query: 327  GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
                   +G   +   P  +  L G+ IE VA G  HT+ ++S GDVYA+G N  GQLG 
Sbjct: 4266 DRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL 4325

Query: 387  GGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            G       P L+     +NV  + +S G  H+A
Sbjct: 4326 GHTNHVREPTLVTVLQGKNV--RQISAGRCHSA 4356



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 132/298 (44%), Gaps = 35/298 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAG---GRHTLALSDIGQVWGWGYGGEGQLGLGSRI- 259
           GD N  +    +T  P   I  V++      HTLA +  G+V+ WG G  G+LG G+   
Sbjct: 438 GDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSST 497

Query: 260 ----RMVSSP---HPIPCIESSY---------------GKDRSAALSRGSVNSEG-PGFR 296
               +++  P     + C+ + Y               G+     L  G  NS   P   
Sbjct: 498 QKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557

Query: 297 VPGNYVKGIACGGRHSAVITDAGALL-TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
              + V  ++CG  H+  ++  G  + +FG G  G+ G G T+    P  V +L G+ I 
Sbjct: 558 KDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIR 617

Query: 356 GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL-PRLLDAPSLENVHSKSVSCG 414
            V AG   ++ ++S G VYA+G      LG G  +A  L P+L++   L       +S G
Sbjct: 618 KVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE--ELAATRIVDISIG 673

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVI-DRNIPSQVT-IEGCVPRNVACGWWHTL 470
             H   ++ D +V+ WG N  GQ G G+       P +V+ ++G   + ++ G  H+L
Sbjct: 674 DSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 95/174 (54%), Gaps = 5/174 (2%)

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
           + I  G   + VI+  G++   G G YG+ G G ++++ +   ++      I+ V++   
Sbjct: 406 QTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKG 465

Query: 363 ---HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
              HT+  +++G+V+++G   +G+LG G    +  P+L+  P L+      VS G RH+A
Sbjct: 466 SDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCVSAGYRHSA 524

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
            + +DG+++ WG   +G+LG GD   RNIP+ V     V   V+CG  HT+ L+
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG-EVSCGSSHTIALS 577



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 112/251 (44%), Gaps = 31/251 (12%)

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
           T+ AG   T  +S  G V   G G  G+LGLG       S +     + ++   RS    
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLG------DSNNQSTLKKLTFEPHRSIKKV 460

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN 344
             S  S+G                  H+   T  G + ++G G YG+ G G++  +  P 
Sbjct: 461 SSSKGSDG------------------HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPK 502

Query: 345 CVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSL 403
            +   L G  +  V+AG  H+  ++ DG++Y +G   FG+LG G   +  +P L+    +
Sbjct: 503 LIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK--DI 560

Query: 404 ENVHSKSVSCGARHTAVIADDGK-VFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRN 461
            NV    VSCG+ HT  ++ DG+ V+ +G    G+LG GD      P  V  ++G   R 
Sbjct: 561 SNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRK 618

Query: 462 VACGWWHTLLL 472
           V  G   +L L
Sbjct: 619 VCAGSQSSLAL 629



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 88/324 (27%), Positives = 130/324 (40%), Gaps = 67/324 (20%)

Query: 52  GGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVK-AAAGWA 108
           G  G  +A +   ++ +WG  D   LG    ++ K+   P+    P +  +V   +AG+ 
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY---PKLIQGPLQGKVVVCVSAGYR 521

Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRS 168
           H  AVTE GE+YTWG  +       FG L  G     D   R    L + +S   +VS  
Sbjct: 522 HSAAVTEDGELYTWGEGD-------FGRLGHG-----DSNSRNIPTLVKDISNVGEVSCG 569

Query: 169 SGGTSS-GTDGR-----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVR 222
           S  T +   DGR     G G+ G                  GD N    P +V    G+ 
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKL--------------GHGDTNRVYKPKVVEALQGMF 615

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V AG + +LAL+  GQV+ WG G    LG GS       P  I              
Sbjct: 616 IRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE------------- 660

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                         +    +  I+ G  H   ++    +  +G    GQCGQG++   ++
Sbjct: 661 -------------ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPIT 707

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTI 365
            P  VS L GI I+ ++AG  H++
Sbjct: 708 KPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 45.8 bits (107), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 4/92 (4%)

Query: 364 TICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
           T  +S   +VY +G N   QL  G  +    P+L  APS  +  ++++  G   T VI+ 
Sbjct: 365 TPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKL--APSFSD--AQTIEAGQYCTFVIST 420

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
           DG V   G   YG+LGLGD  +++   ++T E
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFE 452


>gi|109484871|ref|XP_001075834.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
            norvegicus]
          Length = 4859

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 85/244 (34%), Positives = 128/244 (52%), Gaps = 31/244 (12%)

Query: 232  HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
            H++AL++ G+V+ WG G  G+LG G+  R    P  I  ++                   
Sbjct: 4091 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQ------------------- 4130

Query: 292  GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                   G  V  ++CG +HSAV+T  G L TFG G YG+ G G+T ++  P  V++L G
Sbjct: 4131 -------GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4183

Query: 352  IQIEGVAAGLWHTICISSDGD-VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
             QI  VA GL HT+ +S+DG  V+AFG   +G+LG G   A++ P+ +D   L  +  K 
Sbjct: 4184 YQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDV--LCGIGIKK 4241

Query: 411  VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            V+CG + +  +  DG V+ +G ++   L  G   + N P Q+  + G V  +VA G  HT
Sbjct: 4242 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHT 4301

Query: 470  LLLA 473
            L LA
Sbjct: 4302 LALA 4305



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 105/200 (52%), Gaps = 6/200 (3%)

Query: 275  YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
            +G  R   L+    N   P      +  + + CG   + VI   G +L  G G YG+ GQ
Sbjct: 4000 WGAGRHGQLAEAGRNVMVPATAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQ 4059

Query: 335  GSTDDELSPNCVSSLLGIQIEGVAAGL---WHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
            G++DD      +S+L G  +  +        H++ ++  G+V+++G   +G+LG G    
Sbjct: 4060 GNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDR 4119

Query: 392  ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
            +  PR ++A   E V    +SCG +H+AV+  DGK+F +G   YG+LGLG+  ++ +P +
Sbjct: 4120 QRRPRQIEALQGEEV--VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPER 4177

Query: 452  VT-IEGCVPRNVACGWWHTL 470
            VT +EG     VACG  HTL
Sbjct: 4178 VTALEGYQIGQVACGLNHTL 4197



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 115/401 (28%), Positives = 168/401 (41%), Gaps = 78/401 (19%)

Query: 36   VRLPLTVGS---AWRDVCGGGCGFAMAISD--------SRKLITWGSTDDLGQSYVTSGK 84
            V +P T  S   A + +CG  C F +  +         S   +  G++DDL    V S  
Sbjct: 4015 VMVPATAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISAL 4074

Query: 85   HGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLD 144
             G +           +V +     H +A+TE GEV++WG  +       +G L  G   D
Sbjct: 4075 QGFVV--------TQLVTSCGSDGHSMALTESGEVFSWGDGD-------YGKLGHGNS-D 4118

Query: 145  KDVFERQSSFLT-EQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAE 199
            +    RQ   L  E+V   S   + S   +S  DG+    G+G+ G    R+ L      
Sbjct: 4119 RQRRPRQIEALQGEEVVQMSCGFKHSAVVTS--DGKLFTFGNGDYG----RLGL------ 4166

Query: 200  SSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS-DIGQVWGWGYGGEGQLGLGSR 258
                G+ +    P  VT   G +I  VA G  HTLA+S D   VW +G G  G+LGLG+ 
Sbjct: 4167 ----GNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4222

Query: 259  IRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDA 318
                SSP  +  +                           G  +K +ACG + S  +T  
Sbjct: 4223 TAK-SSPQKVDVL--------------------------CGIGIKKVACGTQFSVALTKD 4255

Query: 319  GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            G + TFG        +G   +   P  +  L G+ IE VA G  HT+ ++S GDVYA+G 
Sbjct: 4256 GHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGS 4315

Query: 379  NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            N  GQLG G       P L+     +N+  + +S G  H+A
Sbjct: 4316 NSEGQLGLGHTNHVREPTLVTVLQGKNI--RQISAGRCHSA 4354



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 95/174 (54%), Gaps = 5/174 (2%)

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
           + I  G   + VI+  G++   G G YG+ G G ++++ +   ++      I+ V++   
Sbjct: 406 QTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKG 465

Query: 363 ---HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
              HT+  +++G+V+++G   +G+LG G    +  P+L+  P L+      VS G RH+A
Sbjct: 466 SDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCVSAGYRHSA 524

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
            + +DG+++ WG   +G+LG GD   RNIP+ V     V   V+CG  HT+ L+
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG-EVSCGSSHTIALS 577



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 132/298 (44%), Gaps = 35/298 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAG---GRHTLALSDIGQVWGWGYGGEGQLGLGSRI- 259
           GD N  +    +T  P   I  V++      HTLA +  G+V+ WG G  G+LG G+   
Sbjct: 438 GDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSST 497

Query: 260 ----RMVSSP---HPIPCIESSY---------------GKDRSAALSRGSVNSEG-PGFR 296
               +++  P     + C+ + Y               G+     L  G  NS   P   
Sbjct: 498 QKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557

Query: 297 VPGNYVKGIACGGRHSAVITDAGALL-TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
              + V  ++CG  H+  ++  G  + +FG G  G+ G G T+    P  + +L G+ I 
Sbjct: 558 KDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIR 617

Query: 356 GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL-PRLLDAPSLENVHSKSVSCG 414
            V AG   ++ ++S G VYA+G      LG G  +A  L P+L++   L       +S G
Sbjct: 618 KVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE--ELAATRIVDISIG 673

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVI-DRNIPSQVT-IEGCVPRNVACGWWHTL 470
             H   ++ D +V+ WG N  GQ G G+       P +V+ ++G   + ++ G  H+L
Sbjct: 674 DSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 112/251 (44%), Gaps = 31/251 (12%)

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
           T+ AG   T  +S  G V   G G  G+LGLG       S +     + ++   RS    
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLG------DSNNQSTLKKLTFEPHRSIKKV 460

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN 344
             S  S+G                  H+   T  G + ++G G YG+ G G++  +  P 
Sbjct: 461 SSSKGSDG------------------HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPK 502

Query: 345 CVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSL 403
            +   L G  +  V+AG  H+  ++ DG++Y +G   FG+LG G   +  +P L+    +
Sbjct: 503 LIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK--DI 560

Query: 404 ENVHSKSVSCGARHTAVIADDGK-VFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRN 461
            NV    VSCG+ HT  ++ DG+ V+ +G    G+LG GD      P  +  ++G   R 
Sbjct: 561 SNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK 618

Query: 462 VACGWWHTLLL 472
           V  G   +L L
Sbjct: 619 VCAGSQSSLAL 629



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 130/324 (40%), Gaps = 67/324 (20%)

Query: 52  GGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVK-AAAGWA 108
           G  G  +A +   ++ +WG  D   LG    ++ K+   P+    P +  +V   +AG+ 
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY---PKLIQGPLQGKVVVCVSAGYR 521

Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRS 168
           H  AVTE GE+YTWG  +       FG L  G     D   R    L + +S   +VS  
Sbjct: 522 HSAAVTEDGELYTWGEGD-------FGRLGHG-----DSNSRNIPTLVKDISNVGEVSCG 569

Query: 169 SGGTSS-GTDGR-----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVR 222
           S  T +   DGR     G G+ G                  GD N    P ++    G+ 
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKL--------------GHGDTNRVYKPKVIEALQGMF 615

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V AG + +LAL+  GQV+ WG G    LG GS       P  I              
Sbjct: 616 IRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE------------- 660

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                         +    +  I+ G  H   ++    +  +G    GQCGQG++   ++
Sbjct: 661 -------------ELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPIT 707

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTI 365
            P  VS L GI I+ ++AG  H++
Sbjct: 708 KPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 45.4 bits (106), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 4/89 (4%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           +S   +VY +G N   QL  G  +    P+L  APS  +  ++++  G   T VI+ DG 
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKL--APSFSD--AQTIEAGQYCTFVISTDGS 423

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
           V   G   YG+LGLGD  +++   ++T E
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFE 452


>gi|257196144|ref|NP_663592.3| hect domain and RCC1-like domain 1 [Mus musculus]
          Length = 4859

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 85/244 (34%), Positives = 128/244 (52%), Gaps = 31/244 (12%)

Query: 232  HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
            H++AL++ G+V+ WG G  G+LG G+  R    P  I  ++                   
Sbjct: 4091 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQ------------------- 4130

Query: 292  GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                   G  V  ++CG +HSAV+T  G L TFG G YG+ G G+T ++  P  V++L G
Sbjct: 4131 -------GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4183

Query: 352  IQIEGVAAGLWHTICISSDGD-VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
             QI  VA GL HT+ +S+DG  V+AFG   +G+LG G   A++ P+ +D   L  +  K 
Sbjct: 4184 YQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDV--LCGIGIKK 4241

Query: 411  VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            V+CG + +  +  DG V+ +G ++   L  G   + N P Q+  + G V  +VA G  HT
Sbjct: 4242 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHT 4301

Query: 470  LLLA 473
            L LA
Sbjct: 4302 LALA 4305



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 105/200 (52%), Gaps = 6/200 (3%)

Query: 275  YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
            +G  R   L+    N   P      +  + + CG   + VI   G +L  G G YG+ GQ
Sbjct: 4000 WGAGRHGQLAEAGRNVMVPATAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQ 4059

Query: 335  GSTDDELSPNCVSSLLGIQIEGVAAGL---WHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
            G++DD      +S+L G  +  +        H++ ++  G+V+++G   +G+LG G    
Sbjct: 4060 GNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDR 4119

Query: 392  ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
            +  PR ++A   E V    +SCG +H+AV+  DGK+F +G   YG+LGLG+  ++ +P +
Sbjct: 4120 QRRPRQIEALQGEEV--VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPER 4177

Query: 452  VT-IEGCVPRNVACGWWHTL 470
            VT +EG     VACG  HTL
Sbjct: 4178 VTALEGYQIGQVACGLNHTL 4197



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 115/401 (28%), Positives = 168/401 (41%), Gaps = 78/401 (19%)

Query: 36   VRLPLTVGS---AWRDVCGGGCGFAMAISD--------SRKLITWGSTDDLGQSYVTSGK 84
            V +P T  S   A + +CG  C F +  +         S   +  G++DDL    V S  
Sbjct: 4015 VMVPATAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISAL 4074

Query: 85   HGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLD 144
             G +           +V +     H +A+TE GEV++WG  +       +G L  G   D
Sbjct: 4075 QGFVV--------TQLVTSCGSDGHSMALTESGEVFSWGDGD-------YGKLGHGNS-D 4118

Query: 145  KDVFERQSSFLT-EQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAE 199
            +    RQ   L  E+V   S   + S   +S  DG+    G+G+ G    R+ L      
Sbjct: 4119 RQRRPRQIEALQGEEVVQMSCGFKHSAVVTS--DGKLFTFGNGDYG----RLGL------ 4166

Query: 200  SSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS-DIGQVWGWGYGGEGQLGLGSR 258
                G+ +    P  VT   G +I  VA G  HTLA+S D   VW +G G  G+LGLG+ 
Sbjct: 4167 ----GNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4222

Query: 259  IRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDA 318
                SSP  +  +                           G  +K +ACG + S  +T  
Sbjct: 4223 TAK-SSPQKVDVL--------------------------CGIGIKKVACGTQFSVALTKD 4255

Query: 319  GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            G + TFG        +G   +   P  +  L G+ IE VA G  HT+ ++S GDVYA+G 
Sbjct: 4256 GHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGS 4315

Query: 379  NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            N  GQLG G       P L+     +N+  + +S G  H+A
Sbjct: 4316 NSEGQLGLGHTNHVREPTLVTVLQGKNI--RQISAGRCHSA 4354



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 95/174 (54%), Gaps = 5/174 (2%)

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
           + I  G   + VI+  G++   G G YG+ G G ++++ +   ++      I+ V++   
Sbjct: 406 QTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKG 465

Query: 363 ---HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
              HT+  +++G+V+++G   +G+LG G    +  P+L+  P L+      VS G RH+A
Sbjct: 466 SDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCVSAGYRHSA 524

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
            + +DG+++ WG   +G+LG GD   RNIP+ V     V   V+CG  HT+ L+
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG-EVSCGSSHTIALS 577



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 132/298 (44%), Gaps = 35/298 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAG---GRHTLALSDIGQVWGWGYGGEGQLGLGSRI- 259
           GD N  +    +T  P   I  V++      HTLA +  G+V+ WG G  G+LG G+   
Sbjct: 438 GDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSST 497

Query: 260 ----RMVSSP---HPIPCIESSY---------------GKDRSAALSRGSVNSEG-PGFR 296
               +++  P     + C+ + Y               G+     L  G  NS   P   
Sbjct: 498 QKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557

Query: 297 VPGNYVKGIACGGRHSAVITDAGALL-TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
              + V  ++CG  H+  ++  G  + +FG G  G+ G G T+    P  + +L G+ I 
Sbjct: 558 KDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIR 617

Query: 356 GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL-PRLLDAPSLENVHSKSVSCG 414
            V AG   ++ ++S G VYA+G      LG G  +A  L P+L++   L       +S G
Sbjct: 618 KVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE--ELAATRIVDISIG 673

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVI-DRNIPSQVT-IEGCVPRNVACGWWHTL 470
             H   ++ D +V+ WG N  GQ G G+       P +V+ ++G   + ++ G  H+L
Sbjct: 674 DSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 112/251 (44%), Gaps = 31/251 (12%)

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
           T+ AG   T  +S  G V   G G  G+LGLG       S +     + ++   RS    
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLG------DSNNQSTLKKLTFEPHRSIKKV 460

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN 344
             S  S+G                  H+   T  G + ++G G YG+ G G++  +  P 
Sbjct: 461 SSSKGSDG------------------HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPK 502

Query: 345 CVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSL 403
            +   L G  +  V+AG  H+  ++ DG++Y +G   FG+LG G   +  +P L+    +
Sbjct: 503 LIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK--DI 560

Query: 404 ENVHSKSVSCGARHTAVIADDGK-VFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRN 461
            NV    VSCG+ HT  ++ DG+ V+ +G    G+LG GD      P  +  ++G   R 
Sbjct: 561 SNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK 618

Query: 462 VACGWWHTLLL 472
           V  G   +L L
Sbjct: 619 VCAGSQSSLAL 629



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 130/324 (40%), Gaps = 67/324 (20%)

Query: 52  GGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVK-AAAGWA 108
           G  G  +A +   ++ +WG  D   LG    ++ K+   P+    P +  +V   +AG+ 
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY---PKLIQGPLQGKVVVCVSAGYR 521

Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRS 168
           H  AVTE GE+YTWG  +       FG L  G     D   R    L + +S   +VS  
Sbjct: 522 HSAAVTEDGELYTWGEGD-------FGRLGHG-----DSNSRNIPTLVKDISNVGEVSCG 569

Query: 169 SGGTSS-GTDGR-----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVR 222
           S  T +   DGR     G G+ G                  GD N    P ++    G+ 
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKL--------------GHGDTNRVYKPKVIEALQGMF 615

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V AG + +LAL+  GQV+ WG G    LG GS       P  I              
Sbjct: 616 IRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE------------- 660

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                         +    +  I+ G  H   ++    +  +G    GQCGQG++   ++
Sbjct: 661 -------------ELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPIT 707

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTI 365
            P  VS L GI I+ ++AG  H++
Sbjct: 708 KPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 45.4 bits (106), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 4/89 (4%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           +S   +VY +G N   QL  G  +    P+L  APS  +  ++++  G   T VI+ DG 
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKL--APSFSD--AQTIEAGQYCTFVISTDGS 423

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
           V   G   YG+LGLGD  +++   ++T E
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFE 452


>gi|148694174|gb|EDL26121.1| mCG130390 [Mus musculus]
          Length = 4870

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 85/244 (34%), Positives = 128/244 (52%), Gaps = 31/244 (12%)

Query: 232  HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
            H++AL++ G+V+ WG G  G+LG G+  R    P  I  ++                   
Sbjct: 4102 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQ------------------- 4141

Query: 292  GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                   G  V  ++CG +HSAV+T  G L TFG G YG+ G G+T ++  P  V++L G
Sbjct: 4142 -------GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4194

Query: 352  IQIEGVAAGLWHTICISSDGD-VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
             QI  VA GL HT+ +S+DG  V+AFG   +G+LG G   A++ P+ +D   L  +  K 
Sbjct: 4195 YQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDV--LCGIGIKK 4252

Query: 411  VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            V+CG + +  +  DG V+ +G ++   L  G   + N P Q+  + G V  +VA G  HT
Sbjct: 4253 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHT 4312

Query: 470  LLLA 473
            L LA
Sbjct: 4313 LALA 4316



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 105/200 (52%), Gaps = 6/200 (3%)

Query: 275  YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
            +G  R   L+    N   P      +  + + CG   + VI   G +L  G G YG+ GQ
Sbjct: 4011 WGAGRHGQLAEAGRNVMVPATAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQ 4070

Query: 335  GSTDDELSPNCVSSLLGIQIEGVAAGL---WHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
            G++DD      +S+L G  +  +        H++ ++  G+V+++G   +G+LG G    
Sbjct: 4071 GNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDR 4130

Query: 392  ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
            +  PR ++A   E V    +SCG +H+AV+  DGK+F +G   YG+LGLG+  ++ +P +
Sbjct: 4131 QRRPRQIEALQGEEV--VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPER 4188

Query: 452  VT-IEGCVPRNVACGWWHTL 470
            VT +EG     VACG  HTL
Sbjct: 4189 VTALEGYQIGQVACGLNHTL 4208



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 115/401 (28%), Positives = 168/401 (41%), Gaps = 78/401 (19%)

Query: 36   VRLPLTVGS---AWRDVCGGGCGFAMAISD--------SRKLITWGSTDDLGQSYVTSGK 84
            V +P T  S   A + +CG  C F +  +         S   +  G++DDL    V S  
Sbjct: 4026 VMVPATAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISAL 4085

Query: 85   HGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLD 144
             G +           +V +     H +A+TE GEV++WG  +       +G L  G   D
Sbjct: 4086 QGFVV--------TQLVTSCGSDGHSMALTESGEVFSWGDGD-------YGKLGHGNS-D 4129

Query: 145  KDVFERQSSFLT-EQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAE 199
            +    RQ   L  E+V   S   + S   +S  DG+    G+G+ G    R+ L      
Sbjct: 4130 RQRRPRQIEALQGEEVVQMSCGFKHSAVVTS--DGKLFTFGNGDYG----RLGL------ 4177

Query: 200  SSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS-DIGQVWGWGYGGEGQLGLGSR 258
                G+ +    P  VT   G +I  VA G  HTLA+S D   VW +G G  G+LGLG+ 
Sbjct: 4178 ----GNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4233

Query: 259  IRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDA 318
                SSP  +  +                           G  +K +ACG + S  +T  
Sbjct: 4234 TAK-SSPQKVDVL--------------------------CGIGIKKVACGTQFSVALTKD 4266

Query: 319  GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            G + TFG        +G   +   P  +  L G+ IE VA G  HT+ ++S GDVYA+G 
Sbjct: 4267 GHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGS 4326

Query: 379  NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            N  GQLG G       P L+     +N+  + +S G  H+A
Sbjct: 4327 NSEGQLGLGHTNHVREPTLVTVLQGKNI--RQISAGRCHSA 4365



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 95/174 (54%), Gaps = 5/174 (2%)

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
           + I  G   + VI+  G++   G G YG+ G G ++++ +   ++      I+ V++   
Sbjct: 406 QTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKG 465

Query: 363 ---HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
              HT+  +++G+V+++G   +G+LG G    +  P+L+  P L+      VS G RH+A
Sbjct: 466 SDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCVSAGYRHSA 524

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
            + +DG+++ WG   +G+LG GD   RNIP+ V     V   V+CG  HT+ L+
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG-EVSCGSSHTIALS 577



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 132/298 (44%), Gaps = 35/298 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAG---GRHTLALSDIGQVWGWGYGGEGQLGLGSRI- 259
           GD N  +    +T  P   I  V++      HTLA +  G+V+ WG G  G+LG G+   
Sbjct: 438 GDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSST 497

Query: 260 ----RMVSSP---HPIPCIESSY---------------GKDRSAALSRGSVNSEG-PGFR 296
               +++  P     + C+ + Y               G+     L  G  NS   P   
Sbjct: 498 QKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557

Query: 297 VPGNYVKGIACGGRHSAVITDAGALL-TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
              + V  ++CG  H+  ++  G  + +FG G  G+ G G T+    P  + +L G+ I 
Sbjct: 558 KDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIR 617

Query: 356 GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL-PRLLDAPSLENVHSKSVSCG 414
            V AG   ++ ++S G VYA+G      LG G  +A  L P+L++   L       +S G
Sbjct: 618 KVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE--ELAATRIVDISIG 673

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVI-DRNIPSQVT-IEGCVPRNVACGWWHTL 470
             H   ++ D +V+ WG N  GQ G G+       P +V+ ++G   + ++ G  H+L
Sbjct: 674 DSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 112/251 (44%), Gaps = 31/251 (12%)

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
           T+ AG   T  +S  G V   G G  G+LGLG       S +     + ++   RS    
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLG------DSNNQSTLKKLTFEPHRSIKKV 460

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN 344
             S  S+G                  H+   T  G + ++G G YG+ G G++  +  P 
Sbjct: 461 SSSKGSDG------------------HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPK 502

Query: 345 CVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSL 403
            +   L G  +  V+AG  H+  ++ DG++Y +G   FG+LG G   +  +P L+    +
Sbjct: 503 LIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK--DI 560

Query: 404 ENVHSKSVSCGARHTAVIADDGK-VFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRN 461
            NV    VSCG+ HT  ++ DG+ V+ +G    G+LG GD      P  +  ++G   R 
Sbjct: 561 SNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK 618

Query: 462 VACGWWHTLLL 472
           V  G   +L L
Sbjct: 619 VCAGSQSSLAL 629



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 130/324 (40%), Gaps = 67/324 (20%)

Query: 52  GGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVK-AAAGWA 108
           G  G  +A +   ++ +WG  D   LG    ++ K+   P+    P +  +V   +AG+ 
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY---PKLIQGPLQGKVVVCVSAGYR 521

Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRS 168
           H  AVTE GE+YTWG  +       FG L  G     D   R    L + +S   +VS  
Sbjct: 522 HSAAVTEDGELYTWGEGD-------FGRLGHG-----DSNSRNIPTLVKDISNVGEVSCG 569

Query: 169 SGGTSS-GTDGR-----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVR 222
           S  T +   DGR     G G+ G                  GD N    P ++    G+ 
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKL--------------GHGDTNRVYKPKVIEALQGMF 615

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V AG + +LAL+  GQV+ WG G    LG GS       P  I              
Sbjct: 616 IRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE------------- 660

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                         +    +  I+ G  H   ++    +  +G    GQCGQG++   ++
Sbjct: 661 -------------ELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPIT 707

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTI 365
            P  VS L GI I+ ++AG  H++
Sbjct: 708 KPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 45.4 bits (106), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 4/89 (4%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           +S   +VY +G N   QL  G  +    P+L  APS  +  ++++  G   T VI+ DG 
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKL--APSFSD--AQTIEAGQYCTFVISTDGS 423

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
           V   G   YG+LGLGD  +++   ++T E
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFE 452


>gi|340378681|ref|XP_003387856.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Amphimedon queenslandica]
          Length = 599

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 99/270 (36%), Positives = 136/270 (50%), Gaps = 38/270 (14%)

Query: 205 DENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSS 264
           D+     P +V    G  +  +A GG HT+AL+  GQV+ WG G +G LG G+ +R   S
Sbjct: 179 DDKPRFLPNVVESLLGQNVTMIACGGSHTIALNSKGQVFSWGAGPQGCLGHGN-LRDRYS 237

Query: 265 PHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTF 324
           P  I                      +GP   V    V  +AC   HSAVI++ G L T 
Sbjct: 238 PLMI----------------------DGPLRDV---NVVHVACYENHSAVISEDGNLYT- 271

Query: 325 GWGLYGQCGQGSTDDELS----PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
            WG  G    G  DD ++    P  V +L G +I  VA G  HT+ I  +G VY+FG N+
Sbjct: 272 -WGKAGP-FLGYMDDSVTKQTKPRLVDALYGTRIVQVACGRSHTLVIDEEGRVYSFGINK 329

Query: 381 FGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL 440
           FG+LG G D+A T P ++  P+L ++    VSCG  H+A I +DG +F WGW   GQLG 
Sbjct: 330 FGELGQGHDKAITKPTMV--PNLVSIC--KVSCGRHHSAAIDEDGVLFMWGWGARGQLGQ 385

Query: 441 GDVIDRNIPSQVTIEGCVP-RNVACGWWHT 469
           G+      P+ V      P  +V+CG+ HT
Sbjct: 386 GEPKSLFSPTPVNGFNDQPLEDVSCGYGHT 415



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 80/262 (30%), Positives = 116/262 (44%), Gaps = 37/262 (14%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P LV    G RI  VA G  HTL + + G+V+ +G    G+LG G   + ++ P  +P +
Sbjct: 292 PRLVDALYGTRIVQVACGRSHTLVIDEEGRVYSFGINKFGELGQGHD-KAITKPTMVPNL 350

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
            S                            +  ++CG  HSA I + G L  +GWG  GQ
Sbjct: 351 VS----------------------------ICKVSCGRHHSAAIDEDGVLFMWGWGARGQ 382

Query: 332 CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
            GQG      SP  V+      +E V+ G  HT  I+++G  Y +G N   Q G      
Sbjct: 383 LGQGEPKSLFSPTPVNGFNDQPLEDVSCGYGHTAAITANGVAYCWGDNASSQCGVPSSVY 442

Query: 392 ETL--PRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGD---VIDR 446
             L  PR +  PS   +    ++CGA  T ++   G++F WG N  GQLG G+      +
Sbjct: 443 GELSSPRGIVLPS--GIRPTQINCGANFTVLVTSIGQLFTWGCNMSGQLGNGEAKKTFSQ 500

Query: 447 NIPSQVTIEGCVPRNVACGWWH 468
            +P +   E  V + VACG  H
Sbjct: 501 PMPVESLSEKRV-KMVACGEDH 521



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/156 (35%), Positives = 80/156 (51%), Gaps = 7/156 (4%)

Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
           L  +G G  G+ G         PN V SLLG  +  +A G  HTI ++S G V+++G   
Sbjct: 164 LYLWGGGDRGRLGHKDDKPRFLPNVVESLLGQNVTMIACGGSHTIALNSKGQVFSWGAGP 223

Query: 381 FGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQ-LG 439
            G LG G  +    P ++D P L +V+   V+C   H+AVI++DG ++ WG  K G  LG
Sbjct: 224 QGCLGHGNLRDRYSPLMIDGP-LRDVNVVHVACYENHSAVISEDGNLYTWG--KAGPFLG 280

Query: 440 LGD--VIDRNIPSQV-TIEGCVPRNVACGWWHTLLL 472
             D  V  +  P  V  + G     VACG  HTL++
Sbjct: 281 YMDDSVTKQTKPRLVDALYGTRIVQVACGRSHTLVI 316



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 4/104 (3%)

Query: 372 DVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWG 431
           D+Y +GG   G+LG   D+   LP ++++   +NV    ++CG  HT  +   G+VF WG
Sbjct: 163 DLYLWGGGDRGRLGHKDDKPRFLPNVVESLLGQNV--TMIACGGSHTIALNSKGQVFSWG 220

Query: 432 WNKYGQLGLGDVIDRNIPSQVT--IEGCVPRNVACGWWHTLLLA 473
               G LG G++ DR  P  +   +      +VAC   H+ +++
Sbjct: 221 AGPQGCLGHGNLRDRYSPLMIDGPLRDVNVVHVACYENHSAVIS 264



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 89/217 (41%), Gaps = 32/217 (14%)

Query: 58  MAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTE 115
           + I +  ++ ++G     +LGQ     G    I +P  +P   SI K + G  H  A+ E
Sbjct: 314 LVIDEEGRVYSFGINKFGELGQ-----GHDKAITKPTMVPNLVSICKVSCGRHHSAAIDE 368

Query: 116 GGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFE-RQSSFLTEQVSPRSQVSRSSGGTSS 174
            G ++ WGW          G L  G G  K +F     +   +Q  P   VS   G T++
Sbjct: 369 DGVLFMWGWG-------ARGQL--GQGEPKSLFSPTPVNGFNDQ--PLEDVSCGYGHTAA 417

Query: 175 GTDGRGS---GEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGR 231
            T    +   G+  S +  +  +     SS  G          + L  G+R   +  G  
Sbjct: 418 ITANGVAYCWGDNASSQCGVPSSVYGELSSPRG----------IVLPSGIRPTQINCGAN 467

Query: 232 HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
            T+ ++ IGQ++ WG    GQLG G   +  S P P+
Sbjct: 468 FTVLVTSIGQLFTWGCNMSGQLGNGEAKKTFSQPMPV 504


>gi|126131099|ref|NP_003913.3| probable E3 ubiquitin-protein ligase HERC1 [Homo sapiens]
 gi|296434522|sp|Q15751.2|HERC1_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC1; AltName:
            Full=HECT domain and RCC1-like domain-containing protein
            1; AltName: Full=p532; AltName: Full=p619
 gi|119598061|gb|EAW77655.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
            sapiens]
 gi|119598062|gb|EAW77656.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
            sapiens]
          Length = 4861

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 84/244 (34%), Positives = 128/244 (52%), Gaps = 31/244 (12%)

Query: 232  HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
            H++AL++ G+V+ WG G  G+LG G+  R    P  I  ++                   
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQ------------------- 4132

Query: 292  GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                   G  V  ++CG +HSAV+T  G L TFG G YG+ G G+T ++  P  V++L G
Sbjct: 4133 -------GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4185

Query: 352  IQIEGVAAGLWHTICISSDGD-VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
             QI  VA GL HT+ +S+DG  V+AFG   +G+LG G   A++ P+ +D   L  +  K 
Sbjct: 4186 YQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDV--LCGIGIKK 4243

Query: 411  VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            V+CG + +  +  DG V+ +G ++   L  G   + N P Q+  + G +  +VA G  HT
Sbjct: 4244 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHT 4303

Query: 470  LLLA 473
            L LA
Sbjct: 4304 LALA 4307



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 105/200 (52%), Gaps = 6/200 (3%)

Query: 275  YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
            +G  R   L+    N   P      +  + + CG   + VI   G +L  G G YG+ GQ
Sbjct: 4002 WGAGRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQ 4061

Query: 335  GSTDDELSPNCVSSLLGIQIEGVAAGL---WHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
            G++DD      +S+L G  +  +        H++ ++  G+V+++G   +G+LG G    
Sbjct: 4062 GNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDR 4121

Query: 392  ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
            +  PR ++A   E V    +SCG +H+AV+  DGK+F +G   YG+LGLG+  ++ +P +
Sbjct: 4122 QRRPRQIEALQGEEV--VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPER 4179

Query: 452  VT-IEGCVPRNVACGWWHTL 470
            VT +EG     VACG  HTL
Sbjct: 4180 VTALEGYQIGQVACGLNHTL 4199



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 113/393 (28%), Positives = 165/393 (41%), Gaps = 75/393 (19%)

Query: 41   TVGSAWRDVCGGGCGFAMAISD--------SRKLITWGSTDDLGQSYVTSGKHGEIPEPF 92
            +   A + +CG  C F +  +         S   +  G++DDL    V S   G +    
Sbjct: 4025 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVV--- 4081

Query: 93   PLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQS 152
                   +V +     H +A+TE GEV++WG  +       +G L  G   D+    RQ 
Sbjct: 4082 -----TQLVTSCGSDGHSMALTESGEVFSWGDGD-------YGKLGHGNS-DRQRRPRQI 4128

Query: 153  SFLT-EQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDEN 207
              L  E+V   S   + S   +S  DG+    G+G+ G    R+ L          G+ +
Sbjct: 4129 EALQGEEVVQMSCGFKHSAVVTS--DGKLFTFGNGDYG----RLGL----------GNTS 4172

Query: 208  LSAFPCLVTLNPGVRIATVAAGGRHTLALS-DIGQVWGWGYGGEGQLGLGSRIRMVSSPH 266
                P  VT   G +I  VA G  HTLA+S D   VW +G G  G+LGLG+     SSP 
Sbjct: 4173 NKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK-SSPQ 4231

Query: 267  PIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGW 326
             I  +                           G  +K +ACG + S  +T  G + TFG 
Sbjct: 4232 KIDVL--------------------------CGIGIKKVACGTQFSVALTKDGHVYTFGQ 4265

Query: 327  GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
                   +G   +   P  +  L G+ IE VA G  HT+ ++S+GDVYA+G N  GQLG 
Sbjct: 4266 DRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL 4325

Query: 387  GGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            G       P L+     +NV  + +S G  H+A
Sbjct: 4326 GHTNHVREPTLVTGLQGKNV--RQISAGRCHSA 4356



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 132/298 (44%), Gaps = 35/298 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAG---GRHTLALSDIGQVWGWGYGGEGQLGLGSRI- 259
           GD N  +    +T  P   I  V++      HTLA +  G+V+ WG G  G+LG G+   
Sbjct: 438 GDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSST 497

Query: 260 ----RMVSSP---HPIPCIESSY---------------GKDRSAALSRGSVNSEG-PGFR 296
               +++  P     + C+ + Y               G+     L  G  NS   P   
Sbjct: 498 QKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557

Query: 297 VPGNYVKGIACGGRHSAVITDAGALL-TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
              + V  ++CG  H+  ++  G  + +FG G  G+ G G T+    P  + +L G+ I 
Sbjct: 558 KDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIR 617

Query: 356 GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL-PRLLDAPSLENVHSKSVSCG 414
            V AG   ++ ++S G VYA+G      LG G  +A  L P+L++   L       VS G
Sbjct: 618 KVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE--ELAATRIVDVSIG 673

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVI-DRNIPSQVT-IEGCVPRNVACGWWHTL 470
             H   ++ D +V+ WG N  GQ G G+       P +V+ ++G   + ++ G  H+L
Sbjct: 674 DSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 95/174 (54%), Gaps = 5/174 (2%)

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
           + I  G   + VI+  G++   G G YG+ G G ++++ +   ++      I+ V++   
Sbjct: 406 QTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKG 465

Query: 363 ---HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
              HT+  +++G+V+++G   +G+LG G    +  P+L+  P L+      VS G RH+A
Sbjct: 466 SDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCVSAGYRHSA 524

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
            + +DG+++ WG   +G+LG GD   RNIP+ V     V   V+CG  HT+ L+
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG-EVSCGSSHTIALS 577



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 112/251 (44%), Gaps = 31/251 (12%)

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
           T+ AG   T  +S  G V   G G  G+LGLG       S +     + ++   RS    
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLG------DSNNQSTLKKLTFEPHRSIKKV 460

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN 344
             S  S+G                  H+   T  G + ++G G YG+ G G++  +  P 
Sbjct: 461 SSSKGSDG------------------HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPK 502

Query: 345 CVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSL 403
            +   L G  +  V+AG  H+  ++ DG++Y +G   FG+LG G   +  +P L+    +
Sbjct: 503 LIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK--DI 560

Query: 404 ENVHSKSVSCGARHTAVIADDGK-VFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRN 461
            NV    VSCG+ HT  ++ DG+ V+ +G    G+LG GD      P  +  ++G   R 
Sbjct: 561 SNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK 618

Query: 462 VACGWWHTLLL 472
           V  G   +L L
Sbjct: 619 VCAGSQSSLAL 629



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 86/324 (26%), Positives = 130/324 (40%), Gaps = 67/324 (20%)

Query: 52  GGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVK-AAAGWA 108
           G  G  +A +   ++ +WG  D   LG    ++ K+   P+    P +  +V   +AG+ 
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY---PKLIQGPLQGKVVVCVSAGYR 521

Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRS 168
           H  AVTE GE+YTWG  +       FG L  G     D   R    L + +S   +VS  
Sbjct: 522 HSAAVTEDGELYTWGEGD-------FGRLGHG-----DSNSRNIPTLVKDISNVGEVSCG 569

Query: 169 SGGTSS-GTDGR-----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVR 222
           S  T +   DGR     G G+ G                  GD N    P ++    G+ 
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKL--------------GHGDTNRVYKPKVIEALQGMF 615

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V AG + +LAL+  GQV+ WG G    LG GS       P  I              
Sbjct: 616 IRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE------------- 660

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                         +    +  ++ G  H   ++    +  +G    GQCGQG++   ++
Sbjct: 661 -------------ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPIT 707

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTI 365
            P  VS L GI I+ ++AG  H++
Sbjct: 708 KPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 45.4 bits (106), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 4/89 (4%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           +S   +VY +G N   QL  G  +    P+L  APS  +  ++++  G   T VI+ DG 
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKL--APSFSD--AQTIEAGQYCTFVISTDGS 423

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
           V   G   YG+LGLGD  +++   ++T E
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFE 452


>gi|1477565|gb|AAD12586.1| p532 [Homo sapiens]
          Length = 4861

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 84/244 (34%), Positives = 128/244 (52%), Gaps = 31/244 (12%)

Query: 232  HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
            H++AL++ G+V+ WG G  G+LG G+  R    P  I  ++                   
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQ------------------- 4132

Query: 292  GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                   G  V  ++CG +HSAV+T  G L TFG G YG+ G G+T ++  P  V++L G
Sbjct: 4133 -------GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4185

Query: 352  IQIEGVAAGLWHTICISSDGD-VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
             QI  VA GL HT+ +S+DG  V+AFG   +G+LG G   A++ P+ +D   L  +  K 
Sbjct: 4186 YQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDV--LCGIGIKK 4243

Query: 411  VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            V+CG + +  +  DG V+ +G ++   L  G   + N P Q+  + G +  +VA G  HT
Sbjct: 4244 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHT 4303

Query: 470  LLLA 473
            L LA
Sbjct: 4304 LALA 4307



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 105/200 (52%), Gaps = 6/200 (3%)

Query: 275  YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
            +G  R   L+    N   P      +  + + CG   + VI   G +L  G G YG+ GQ
Sbjct: 4002 WGAGRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQ 4061

Query: 335  GSTDDELSPNCVSSLLGIQIEGVAAGL---WHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
            G++DD      +S+L G  +  +        H++ ++  G+V+++G   +G+LG G    
Sbjct: 4062 GNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDR 4121

Query: 392  ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
            +  PR ++A   E V    +SCG +H+AV+  DGK+F +G   YG+LGLG+  ++ +P +
Sbjct: 4122 QRRPRQIEALQGEEV--VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPER 4179

Query: 452  VT-IEGCVPRNVACGWWHTL 470
            VT +EG     VACG  HTL
Sbjct: 4180 VTALEGYQIGQVACGLNHTL 4199



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 113/393 (28%), Positives = 165/393 (41%), Gaps = 75/393 (19%)

Query: 41   TVGSAWRDVCGGGCGFAMAISD--------SRKLITWGSTDDLGQSYVTSGKHGEIPEPF 92
            +   A + +CG  C F +  +         S   +  G++DDL    V S   G +    
Sbjct: 4025 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVV--- 4081

Query: 93   PLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQS 152
                   +V +     H +A+TE GEV++WG  +       +G L  G   D+    RQ 
Sbjct: 4082 -----TQLVTSCGSDGHSMALTESGEVFSWGDGD-------YGKLGHGNS-DRQRRPRQI 4128

Query: 153  SFLT-EQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDEN 207
              L  E+V   S   + S   +S  DG+    G+G+ G    R+ L          G+ +
Sbjct: 4129 EALQGEEVVQMSCGFKHSAVVTS--DGKLFTFGNGDYG----RLGL----------GNTS 4172

Query: 208  LSAFPCLVTLNPGVRIATVAAGGRHTLALS-DIGQVWGWGYGGEGQLGLGSRIRMVSSPH 266
                P  VT   G +I  VA G  HTLA+S D   VW +G G  G+LGLG+     SSP 
Sbjct: 4173 NKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK-SSPQ 4231

Query: 267  PIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGW 326
             I  +                           G  +K +ACG + S  +T  G + TFG 
Sbjct: 4232 KIDVL--------------------------CGIGIKKVACGTQFSVALTKDGHVYTFGQ 4265

Query: 327  GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
                   +G   +   P  +  L G+ IE VA G  HT+ ++S+GDVYA+G N  GQLG 
Sbjct: 4266 DRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL 4325

Query: 387  GGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            G       P L+     +NV  + +S G  H+A
Sbjct: 4326 GHTNHVREPTLVTGLQGKNV--RQISAGRCHSA 4356



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 132/298 (44%), Gaps = 35/298 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAG---GRHTLALSDIGQVWGWGYGGEGQLGLGSRI- 259
           GD N  +    +T  P   I  V++      HTLA +  G+V+ WG G  G+LG G+   
Sbjct: 438 GDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSST 497

Query: 260 ----RMVSSP---HPIPCIESSY---------------GKDRSAALSRGSVNSEG-PGFR 296
               +++  P     + C+ + Y               G+     L  G  NS   P   
Sbjct: 498 QKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557

Query: 297 VPGNYVKGIACGGRHSAVITDAGALL-TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
              + V  ++CG  H+  ++  G  + +FG G  G+ G G T+    P  + +L G+ I 
Sbjct: 558 KDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIR 617

Query: 356 GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL-PRLLDAPSLENVHSKSVSCG 414
            V AG   ++ ++S G VYA+G      LG G  +A  L P+L++   L       VS G
Sbjct: 618 KVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE--ELAATRIVDVSIG 673

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVI-DRNIPSQVT-IEGCVPRNVACGWWHTL 470
             H   ++ D +V+ WG N  GQ G G+       P +V+ ++G   + ++ G  H+L
Sbjct: 674 DSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 95/174 (54%), Gaps = 5/174 (2%)

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
           + I  G   + VI+  G++   G G YG+ G G ++++ +   ++      I+ V++   
Sbjct: 406 QTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKG 465

Query: 363 ---HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
              HT+  +++G+V+++G   +G+LG G    +  P+L+  P L+      VS G RH+A
Sbjct: 466 SDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCVSAGYRHSA 524

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
            + +DG+++ WG   +G+LG GD   RNIP+ V     V   V+CG  HT+ L+
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG-EVSCGSSHTIALS 577



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 112/251 (44%), Gaps = 31/251 (12%)

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
           T+ AG   T  +S  G V   G G  G+LGLG       S +     + ++   RS    
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLG------DSNNQSTLKKLTFEPHRSIKKV 460

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN 344
             S  S+G                  H+   T  G + ++G G YG+ G G++  +  P 
Sbjct: 461 SSSKGSDG------------------HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPK 502

Query: 345 CVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSL 403
            +   L G  +  V+AG  H+  ++ DG++Y +G   FG+LG G   +  +P L+    +
Sbjct: 503 LIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK--DI 560

Query: 404 ENVHSKSVSCGARHTAVIADDGK-VFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRN 461
            NV    VSCG+ HT  ++ DG+ V+ +G    G+LG GD      P  +  ++G   R 
Sbjct: 561 SNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK 618

Query: 462 VACGWWHTLLL 472
           V  G   +L L
Sbjct: 619 VCAGSQSSLAL 629



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 86/324 (26%), Positives = 130/324 (40%), Gaps = 67/324 (20%)

Query: 52  GGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVK-AAAGWA 108
           G  G  +A +   ++ +WG  D   LG    ++ K+   P+    P +  +V   +AG+ 
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY---PKLIQGPLQGKVVVCVSAGYR 521

Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRS 168
           H  AVTE GE+YTWG  +       FG L  G     D   R    L + +S   +VS  
Sbjct: 522 HSAAVTEDGELYTWGEGD-------FGRLGHG-----DSNSRNIPTLVKDISNVGEVSCG 569

Query: 169 SGGTSS-GTDGR-----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVR 222
           S  T +   DGR     G G+ G                  GD N    P ++    G+ 
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKL--------------GHGDTNRVYKPKVIEALQGMF 615

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V AG + +LAL+  GQV+ WG G    LG GS       P  I              
Sbjct: 616 IRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE------------- 660

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                         +    +  ++ G  H   ++    +  +G    GQCGQG++   ++
Sbjct: 661 -------------ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPIT 707

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTI 365
            P  VS L GI I+ ++AG  H++
Sbjct: 708 KPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 45.4 bits (106), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 4/89 (4%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           +S   +VY +G N   QL  G  +    P+L  APS  +  ++++  G   T VI+ DG 
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKL--APSFSD--AQTIEAGQYCTFVISTDGS 423

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
           V   G   YG+LGLGD  +++   ++T E
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFE 452


>gi|449676845|ref|XP_002166895.2| PREDICTED: uncharacterized protein LOC100213911, partial [Hydra
           magnipapillata]
          Length = 725

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 66/180 (36%), Positives = 107/180 (59%), Gaps = 5/180 (2%)

Query: 295 FRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQI 354
           F +  + V  +ACG  HSAV+T++G L  FG   +GQ G G T     P+ V  L   ++
Sbjct: 33  FWIKNDGVVEMACGDEHSAVVTESGRLYVFGSNDWGQLGLGHTKSLNKPSFVKPLKPEKV 92

Query: 355 EGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA-PSLENVHSKSVSC 413
             VA G  HTI  S  G +++FG N+ GQLG    + E LP+ +++ P +E    K ++C
Sbjct: 93  RKVACGRNHTIVYSESGKLFSFGCNEDGQLGHVDKENELLPKEIESIPQME---IKQIAC 149

Query: 414 GARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           G  H+ ++++DG V+ WG N  GQLGLG+ ++ ++P ++  +  V  +V+CG++HT L+ 
Sbjct: 150 GTYHSIILSEDGDVYVWGNNNEGQLGLGEEVENSLPKKLKFKKEVV-SVSCGYYHTALVT 208



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/257 (30%), Positives = 129/257 (50%), Gaps = 39/257 (15%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  +A G  H+  +++ G+++ +G    GQLGLG                       + +
Sbjct: 40  VVEMACGDEHSAVVTESGRLYVFGSNDWGQLGLG----------------------HTKS 77

Query: 283 LSRGSVNSEGPGFRVP--GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
           L++       P F  P     V+ +ACG  H+ V +++G L +FG    GQ G    ++E
Sbjct: 78  LNK-------PSFVKPLKPEKVRKVACGRNHTIVYSESGKLFSFGCNEDGQLGHVDKENE 130

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
           L P  + S+  ++I+ +A G +H+I +S DGDVY +G N  GQLG G +   +LP+ L  
Sbjct: 131 LLPKEIESIPQMEIKQIACGTYHSIILSEDGDVYVWGNNNEGQLGLGEEVENSLPKKLKF 190

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL--GDVIDRNIPSQVTIEGCV 458
              E V   SVSCG  HTA++  DG ++ +G N+ G+LGL    + +  +P  V +    
Sbjct: 191 KK-EVV---SVSCGYYHTALVTRDGFLYTFGENELGKLGLSSSQLSNTTVPQSVAMPADN 246

Query: 459 PR--NVACGWWHTLLLA 473
               +V+CG  HT+ + 
Sbjct: 247 DEYISVSCGARHTVAIT 263



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/279 (31%), Positives = 126/279 (45%), Gaps = 42/279 (15%)

Query: 205 DENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSS 264
           D+     P  +   P + I  +A G  H++ LS+ G V+ WG   EGQLGLG  +   S 
Sbjct: 126 DKENELLPKEIESIPQMEIKQIACGTYHSIILSEDGDVYVWGNNNEGQLGLGEEVEN-SL 184

Query: 265 PHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTF 324
           P  +      + K+                       V  ++CG  H+A++T  G L TF
Sbjct: 185 PKKLK-----FKKE-----------------------VVSVSCGYYHTALVTRDGFLYTF 216

Query: 325 GWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG-----VAAGLWHTICISSDGDVYAFGGN 379
           G    G+ G  S+  +LS   V   + +  +      V+ G  HT+ I+  G  YA+G  
Sbjct: 217 GENELGKLGLSSS--QLSNTTVPQSVAMPADNDEYISVSCGARHTVAITKQGHCYAWGDG 274

Query: 380 QFGQLGTGGDQAE-TLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
             GQLG G    E   P+ +    L      SVSCG  HTAV+ + GKVF +G  ++G+L
Sbjct: 275 SQGQLGHGTKLLEVNEPKQI--KKLSGQKCISVSCGESHTAVVTESGKVFTFGDGRHGKL 332

Query: 439 GLGDVIDRNIPSQVTIEGCVPRN---VACGWWHTLLLAV 474
           G G+    N    V +      N   V+CG  HTL+LAV
Sbjct: 333 GQGEDSFSNSFDPVYLSRFNYFNVVYVSCGGCHTLVLAV 371



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 89/373 (23%), Positives = 150/373 (40%), Gaps = 66/373 (17%)

Query: 17  WGYLPGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLG 76
           WG L   L     +  P  V+ PL      +  CG      +  S+S KL ++G  +D G
Sbjct: 67  WGQL--GLGHTKSLNKPSFVK-PLKPEKVRKVACGRN--HTIVYSESGKLFSFGCNED-G 120

Query: 77  QSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGD 136
           Q      ++  +P+      +  I + A G  H + ++E G+VY WG           G 
Sbjct: 121 QLGHVDKENELLPKEIESIPQMEIKQIACGTYHSIILSEDGDVYVWG-------NNNEGQ 173

Query: 137 LSTGTGLDKDVFERQSSFLTEQVS------PRSQVSRSSGGTSSGTDGRGSGEEGSKRRR 190
           L  G  ++ +   ++  F  E VS        + V+R     + G +  G     S +  
Sbjct: 174 LGLGEEVE-NSLPKKLKFKKEVVSVSCGYYHTALVTRDGFLYTFGENELGKLGLSSSQLS 232

Query: 191 ISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGE 250
            +   Q+    +  DE +S                V+ G RHT+A++  G  + WG G +
Sbjct: 233 NTTVPQSVAMPADNDEYIS----------------VSCGARHTVAITKQGHCYAWGDGSQ 276

Query: 251 GQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGR 310
           GQLG G+++  V+ P  I                           ++ G     ++CG  
Sbjct: 277 GQLGHGTKLLEVNEPKQIK--------------------------KLSGQKCISVSCGES 310

Query: 311 HSAVITDAGALLTFGWGLYGQCGQG--STDDELSPNCVSSLLGIQIEGVAAGLWHT--IC 366
           H+AV+T++G + TFG G +G+ GQG  S  +   P  +S      +  V+ G  HT  + 
Sbjct: 311 HTAVVTESGKVFTFGDGRHGKLGQGEDSFSNSFDPVYLSRFNYFNVVYVSCGGCHTLVLA 370

Query: 367 ISSDGDVYAFGGN 379
           +  + D +  G N
Sbjct: 371 VHKNKDDFVDGEN 383



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 84/163 (51%), Gaps = 19/163 (11%)

Query: 315 ITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGV---AAGLWHTICISSDG 371
           I D GA+ TFG   +              + +++   I+ +GV   A G  H+  ++  G
Sbjct: 11  IPDLGAVFTFGKSKFA-------------DNIANKFWIKNDGVVEMACGDEHSAVVTESG 57

Query: 372 DVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWG 431
            +Y FG N +GQLG G  ++   P  +     E V  + V+CG  HT V ++ GK+F +G
Sbjct: 58  RLYVFGSNDWGQLGLGHTKSLNKPSFVKPLKPEKV--RKVACGRNHTIVYSESGKLFSFG 115

Query: 432 WNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLA 473
            N+ GQLG  D  +  +P ++ +I     + +ACG +H+++L+
Sbjct: 116 CNEDGQLGHVDKENELLPKEIESIPQMEIKQIACGTYHSIILS 158


>gi|392350138|ref|XP_236362.6| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
            norvegicus]
          Length = 4859

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 85/244 (34%), Positives = 128/244 (52%), Gaps = 31/244 (12%)

Query: 232  HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
            H++AL++ G+V+ WG G  G+LG G+  R    P  I  ++                   
Sbjct: 4091 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQ------------------- 4130

Query: 292  GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                   G  V  ++CG +HSAV+T  G L TFG G YG+ G G+T ++  P  V++L G
Sbjct: 4131 -------GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4183

Query: 352  IQIEGVAAGLWHTICISSDGD-VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
             QI  VA GL HT+ +S+DG  V+AFG   +G+LG G   A++ P+ +D   L  +  K 
Sbjct: 4184 YQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDV--LCGIGIKK 4241

Query: 411  VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            V+CG + +  +  DG V+ +G ++   L  G   + N P Q+  + G V  +VA G  HT
Sbjct: 4242 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHT 4301

Query: 470  LLLA 473
            L LA
Sbjct: 4302 LALA 4305



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 105/200 (52%), Gaps = 6/200 (3%)

Query: 275  YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
            +G  R   L+    N   P      +  + + CG   + VI   G +L  G G YG+ GQ
Sbjct: 4000 WGAGRHGQLAEAGRNVMVPATAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQ 4059

Query: 335  GSTDDELSPNCVSSLLGIQIEGVAAGL---WHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
            G++DD      +S+L G  +  +        H++ ++  G+V+++G   +G+LG G    
Sbjct: 4060 GNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDR 4119

Query: 392  ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
            +  PR ++A   E V    +SCG +H+AV+  DGK+F +G   YG+LGLG+  ++ +P +
Sbjct: 4120 QRRPRQIEALQGEEV--VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPER 4177

Query: 452  VT-IEGCVPRNVACGWWHTL 470
            VT +EG     VACG  HTL
Sbjct: 4178 VTALEGYQIGQVACGLNHTL 4197



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 115/401 (28%), Positives = 168/401 (41%), Gaps = 78/401 (19%)

Query: 36   VRLPLTVGS---AWRDVCGGGCGFAMAISD--------SRKLITWGSTDDLGQSYVTSGK 84
            V +P T  S   A + +CG  C F +  +         S   +  G++DDL    V S  
Sbjct: 4015 VMVPATAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISAL 4074

Query: 85   HGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLD 144
             G +           +V +     H +A+TE GEV++WG  +       +G L  G   D
Sbjct: 4075 QGFVV--------TQLVTSCGSDGHSMALTESGEVFSWGDGD-------YGKLGHGNS-D 4118

Query: 145  KDVFERQSSFLT-EQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAE 199
            +    RQ   L  E+V   S   + S   +S  DG+    G+G+ G    R+ L      
Sbjct: 4119 RQRRPRQIEALQGEEVVQMSCGFKHSAVVTS--DGKLFTFGNGDYG----RLGL------ 4166

Query: 200  SSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS-DIGQVWGWGYGGEGQLGLGSR 258
                G+ +    P  VT   G +I  VA G  HTLA+S D   VW +G G  G+LGLG+ 
Sbjct: 4167 ----GNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4222

Query: 259  IRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDA 318
                SSP  +  +                           G  +K +ACG + S  +T  
Sbjct: 4223 TAK-SSPQKVDVL--------------------------CGIGIKKVACGTQFSVALTKD 4255

Query: 319  GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            G + TFG        +G   +   P  +  L G+ IE VA G  HT+ ++S GDVYA+G 
Sbjct: 4256 GHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGS 4315

Query: 379  NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            N  GQLG G       P L+     +N+  + +S G  H+A
Sbjct: 4316 NSEGQLGLGHTNHVREPTLVTVLQGKNI--RQISAGRCHSA 4354



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 95/174 (54%), Gaps = 5/174 (2%)

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
           + I  G   + VI+  G++   G G YG+ G G ++++ +   ++      I+ V++   
Sbjct: 406 QTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKG 465

Query: 363 ---HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
              HT+  +++G+V+++G   +G+LG G    +  P+L+  P L+      VS G RH+A
Sbjct: 466 SDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCVSAGYRHSA 524

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
            + +DG+++ WG   +G+LG GD   RNIP+ V     V   V+CG  HT+ L+
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG-EVSCGSSHTIALS 577



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 132/298 (44%), Gaps = 35/298 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAG---GRHTLALSDIGQVWGWGYGGEGQLGLGSRI- 259
           GD N  +    +T  P   I  V++      HTLA +  G+V+ WG G  G+LG G+   
Sbjct: 438 GDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSST 497

Query: 260 ----RMVSSP---HPIPCIESSY---------------GKDRSAALSRGSVNSEG-PGFR 296
               +++  P     + C+ + Y               G+     L  G  NS   P   
Sbjct: 498 QKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557

Query: 297 VPGNYVKGIACGGRHSAVITDAGALL-TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
              + V  ++CG  H+  ++  G  + +FG G  G+ G G T+    P  + +L G+ I 
Sbjct: 558 KDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIR 617

Query: 356 GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL-PRLLDAPSLENVHSKSVSCG 414
            V AG   ++ ++S G VYA+G      LG G  +A  L P+L++   L       +S G
Sbjct: 618 KVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE--ELAATRIVDISIG 673

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVI-DRNIPSQVT-IEGCVPRNVACGWWHTL 470
             H   ++ D +V+ WG N  GQ G G+       P +V+ ++G   + ++ G  H+L
Sbjct: 674 DSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 112/251 (44%), Gaps = 31/251 (12%)

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
           T+ AG   T  +S  G V   G G  G+LGLG       S +     + ++   RS    
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLG------DSNNQSTLKKLTFEPHRSIKKV 460

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN 344
             S  S+G                  H+   T  G + ++G G YG+ G G++  +  P 
Sbjct: 461 SSSKGSDG------------------HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPK 502

Query: 345 CVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSL 403
            +   L G  +  V+AG  H+  ++ DG++Y +G   FG+LG G   +  +P L+    +
Sbjct: 503 LIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK--DI 560

Query: 404 ENVHSKSVSCGARHTAVIADDGK-VFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRN 461
            NV    VSCG+ HT  ++ DG+ V+ +G    G+LG GD      P  +  ++G   R 
Sbjct: 561 SNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK 618

Query: 462 VACGWWHTLLL 472
           V  G   +L L
Sbjct: 619 VCAGSQSSLAL 629



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 130/324 (40%), Gaps = 67/324 (20%)

Query: 52  GGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVK-AAAGWA 108
           G  G  +A +   ++ +WG  D   LG    ++ K+   P+    P +  +V   +AG+ 
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY---PKLIQGPLQGKVVVCVSAGYR 521

Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRS 168
           H  AVTE GE+YTWG  +       FG L  G     D   R    L + +S   +VS  
Sbjct: 522 HSAAVTEDGELYTWGEGD-------FGRLGHG-----DSNSRNIPTLVKDISNVGEVSCG 569

Query: 169 SGGTSS-GTDGR-----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVR 222
           S  T +   DGR     G G+ G                  GD N    P ++    G+ 
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKL--------------GHGDTNRVYKPKVIEALQGMF 615

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V AG + +LAL+  GQV+ WG G    LG GS       P  I              
Sbjct: 616 IRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE------------- 660

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                         +    +  I+ G  H   ++    +  +G    GQCGQG++   ++
Sbjct: 661 -------------ELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPIT 707

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTI 365
            P  VS L GI I+ ++AG  H++
Sbjct: 708 KPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 45.4 bits (106), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 4/89 (4%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           +S   +VY +G N   QL  G  +    P+L  APS  +  ++++  G   T VI+ DG 
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKL--APSFSD--AQTIEAGQYCTFVISTDGS 423

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
           V   G   YG+LGLGD  +++   ++T E
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFE 452


>gi|354474338|ref|XP_003499388.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
            [Cricetulus griseus]
          Length = 4859

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 85/244 (34%), Positives = 128/244 (52%), Gaps = 31/244 (12%)

Query: 232  HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
            H++AL++ G+V+ WG G  G+LG G+  R    P  I  ++                   
Sbjct: 4091 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQ------------------- 4130

Query: 292  GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                   G  V  ++CG +HSAV+T  G L TFG G YG+ G G+T ++  P  V++L G
Sbjct: 4131 -------GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4183

Query: 352  IQIEGVAAGLWHTICISSDGD-VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
             QI  VA GL HT+ +S+DG  V+AFG   +G+LG G   A++ P+ +D   L  +  K 
Sbjct: 4184 YQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDV--LCGIGIKK 4241

Query: 411  VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            V+CG + +  +  DG V+ +G ++   L  G   + N P Q+  + G V  +VA G  HT
Sbjct: 4242 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHT 4301

Query: 470  LLLA 473
            L LA
Sbjct: 4302 LALA 4305



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 105/200 (52%), Gaps = 6/200 (3%)

Query: 275  YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
            +G  R   L+    N   P      +  + + CG   + VI   G +L  G G YG+ GQ
Sbjct: 4000 WGAGRHGQLAEAGRNVMVPATAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQ 4059

Query: 335  GSTDDELSPNCVSSLLGIQIEGVAAGL---WHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
            G++DD      +S+L G  +  +        H++ ++  G+V+++G   +G+LG G    
Sbjct: 4060 GNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDR 4119

Query: 392  ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
            +  PR ++A   E V    +SCG +H+AV+  DGK+F +G   YG+LGLG+  ++ +P +
Sbjct: 4120 QRRPRQIEALQGEEV--VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPER 4177

Query: 452  VT-IEGCVPRNVACGWWHTL 470
            VT +EG     VACG  HTL
Sbjct: 4178 VTALEGYQIGQVACGLNHTL 4197



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 115/401 (28%), Positives = 168/401 (41%), Gaps = 78/401 (19%)

Query: 36   VRLPLTVGS---AWRDVCGGGCGFAMAISD--------SRKLITWGSTDDLGQSYVTSGK 84
            V +P T  S   A + +CG  C F +  +         S   +  G++DDL    V S  
Sbjct: 4015 VMVPATAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISAL 4074

Query: 85   HGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLD 144
             G +           +V +     H +A+TE GEV++WG  +       +G L  G   D
Sbjct: 4075 QGFVV--------TQLVTSCGSDGHSMALTESGEVFSWGDGD-------YGKLGHGNS-D 4118

Query: 145  KDVFERQSSFLT-EQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAE 199
            +    RQ   L  E+V   S   + S   +S  DG+    G+G+ G    R+ L      
Sbjct: 4119 RQRRPRQIEALQGEEVVQMSCGFKHSAVVTS--DGKLFTFGNGDYG----RLGL------ 4166

Query: 200  SSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS-DIGQVWGWGYGGEGQLGLGSR 258
                G+ +    P  VT   G +I  VA G  HTLA+S D   VW +G G  G+LGLG+ 
Sbjct: 4167 ----GNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4222

Query: 259  IRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDA 318
                SSP  +  +                           G  +K +ACG + S  +T  
Sbjct: 4223 TAK-SSPQKVDVL--------------------------CGIGIKKVACGTQFSVALTKD 4255

Query: 319  GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            G + TFG        +G   +   P  +  L G+ IE VA G  HT+ ++S GDVYA+G 
Sbjct: 4256 GHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGS 4315

Query: 379  NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            N  GQLG G       P L+     +N+  + +S G  H+A
Sbjct: 4316 NSEGQLGLGHTNHVREPTLVTVLQGKNI--RQISAGRCHSA 4354



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 95/174 (54%), Gaps = 5/174 (2%)

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
           + I  G   + VI+  G++   G G YG+ G G ++++ +   ++      I+ V++   
Sbjct: 406 QTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKG 465

Query: 363 ---HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
              HT+  +++G+V+++G   +G+LG G    +  P+L+  P L+      VS G RH+A
Sbjct: 466 SDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCVSAGYRHSA 524

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
            + +DG+++ WG   +G+LG GD   RNIP+ V     V   V+CG  HT+ L+
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG-EVSCGSSHTIALS 577



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 132/298 (44%), Gaps = 35/298 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAG---GRHTLALSDIGQVWGWGYGGEGQLGLGSRI- 259
           GD N  +    +T  P   I  V++      HTLA +  G+V+ WG G  G+LG G+   
Sbjct: 438 GDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSST 497

Query: 260 ----RMVSSP---HPIPCIESSY---------------GKDRSAALSRGSVNSEG-PGFR 296
               +++  P     + C+ + Y               G+     L  G  NS   P   
Sbjct: 498 QKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557

Query: 297 VPGNYVKGIACGGRHSAVITDAGALL-TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
              + V  ++CG  H+  ++  G  + +FG G  G+ G G T+    P  + +L G+ I 
Sbjct: 558 KDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIR 617

Query: 356 GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL-PRLLDAPSLENVHSKSVSCG 414
            V AG   ++ ++S G VYA+G      LG G  +A  L P+L++   L       +S G
Sbjct: 618 KVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE--ELAATRIVDISIG 673

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVI-DRNIPSQVT-IEGCVPRNVACGWWHTL 470
             H   ++ D +V+ WG N  GQ G G+       P +V+ ++G   + ++ G  H+L
Sbjct: 674 DSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 112/251 (44%), Gaps = 31/251 (12%)

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
           T+ AG   T  +S  G V   G G  G+LGLG       S +     + ++   RS    
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLG------DSNNQSTLKKLTFEPHRSIKKV 460

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN 344
             S  S+G                  H+   T  G + ++G G YG+ G G++  +  P 
Sbjct: 461 SSSKGSDG------------------HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPK 502

Query: 345 CVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSL 403
            +   L G  +  V+AG  H+  ++ DG++Y +G   FG+LG G   +  +P L+    +
Sbjct: 503 LIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK--DI 560

Query: 404 ENVHSKSVSCGARHTAVIADDGK-VFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRN 461
            NV    VSCG+ HT  ++ DG+ V+ +G    G+LG GD      P  +  ++G   R 
Sbjct: 561 SNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK 618

Query: 462 VACGWWHTLLL 472
           V  G   +L L
Sbjct: 619 VCAGSQSSLAL 629



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 130/324 (40%), Gaps = 67/324 (20%)

Query: 52  GGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVK-AAAGWA 108
           G  G  +A +   ++ +WG  D   LG    ++ K+   P+    P +  +V   +AG+ 
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY---PKLIQGPLQGKVVVCVSAGYR 521

Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRS 168
           H  AVTE GE+YTWG  +       FG L  G     D   R    L + +S   +VS  
Sbjct: 522 HSAAVTEDGELYTWGEGD-------FGRLGHG-----DSNSRNIPTLVKDISNVGEVSCG 569

Query: 169 SGGTSS-GTDGR-----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVR 222
           S  T +   DGR     G G+ G                  GD N    P ++    G+ 
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKL--------------GHGDTNRVYKPKVIEALQGMF 615

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V AG + +LAL+  GQV+ WG G    LG GS       P  I              
Sbjct: 616 IRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE------------- 660

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                         +    +  I+ G  H   ++    +  +G    GQCGQG++   ++
Sbjct: 661 -------------ELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPIT 707

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTI 365
            P  VS L GI I+ ++AG  H++
Sbjct: 708 KPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 45.4 bits (106), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 4/89 (4%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           +S   +VY +G N   QL  G  +    P+L  APS  +  ++++  G   T VI+ DG 
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKL--APSFSD--AQTIEAGQYCTFVISTDGS 423

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
           V   G   YG+LGLGD  +++   ++T E
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFE 452


>gi|383422563|gb|AFH34495.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4846

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 84/244 (34%), Positives = 128/244 (52%), Gaps = 31/244 (12%)

Query: 232  HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
            H++AL++ G+V+ WG G  G+LG G+  R    P  I  ++                   
Sbjct: 4078 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQ------------------- 4117

Query: 292  GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                   G  V  ++CG +HSAV+T  G L TFG G YG+ G G+T ++  P  V++L G
Sbjct: 4118 -------GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4170

Query: 352  IQIEGVAAGLWHTICISSDGD-VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
             QI  VA GL HT+ +S+DG  V+AFG   +G+LG G   A++ P+ +D   L  +  K 
Sbjct: 4171 YQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDV--LCGIGIKK 4228

Query: 411  VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            V+CG + +  +  DG V+ +G ++   L  G   + N P Q+  + G +  +VA G  HT
Sbjct: 4229 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHT 4288

Query: 470  LLLA 473
            L LA
Sbjct: 4289 LALA 4292



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 112/233 (48%), Gaps = 36/233 (15%)

Query: 242  VWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNY 301
            V+ WG G  GQL    R  MV +                            P F    + 
Sbjct: 3984 VYLWGAGRHGQLAEAGRNVMVPAA--------------------------APSF----SQ 4013

Query: 302  VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
             + + CG   + VI   G +L  G G YG+ GQG++DD      +S+L G  +  +    
Sbjct: 4014 AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSC 4073

Query: 362  ---WHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
                H++ ++  G+V+++G   +G+LG G    +  PR ++A   E V    +SCG +H+
Sbjct: 4074 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEV--VQMSCGFKHS 4131

Query: 419  AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
            AV+  DGK+F +G   YG+LGLG+  ++ +P +VT +EG     VACG  HTL
Sbjct: 4132 AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTL 4184



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 113/393 (28%), Positives = 165/393 (41%), Gaps = 75/393 (19%)

Query: 41   TVGSAWRDVCGGGCGFAMAISD--------SRKLITWGSTDDLGQSYVTSGKHGEIPEPF 92
            +   A + +CG  C F +  +         S   +  G++DDL    V S   G +    
Sbjct: 4010 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVV--- 4066

Query: 93   PLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQS 152
                   +V +     H +A+TE GEV++WG  +       +G L  G   D+    RQ 
Sbjct: 4067 -----TQLVTSCGSDGHSMALTESGEVFSWGDGD-------YGKLGHGNS-DRQRRPRQI 4113

Query: 153  SFLT-EQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDEN 207
              L  E+V   S   + S   +S  DG+    G+G+ G    R+ L          G+ +
Sbjct: 4114 EALQGEEVVQMSCGFKHSAVVTS--DGKLFTFGNGDYG----RLGL----------GNTS 4157

Query: 208  LSAFPCLVTLNPGVRIATVAAGGRHTLALS-DIGQVWGWGYGGEGQLGLGSRIRMVSSPH 266
                P  VT   G +I  VA G  HTLA+S D   VW +G G  G+LGLG+     SSP 
Sbjct: 4158 NKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK-SSPQ 4216

Query: 267  PIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGW 326
             I  +                           G  +K +ACG + S  +T  G + TFG 
Sbjct: 4217 KIDVL--------------------------CGIGIKKVACGTQFSVALTKDGHVYTFGQ 4250

Query: 327  GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
                   +G   +   P  +  L G+ IE VA G  HT+ ++S+GDVYA+G N  GQLG 
Sbjct: 4251 DRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL 4310

Query: 387  GGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            G       P L+     +NV  + +S G  H+A
Sbjct: 4311 GHTNHVREPTLVTGLQGKNV--RQISAGRCHSA 4341



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 132/298 (44%), Gaps = 35/298 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAG---GRHTLALSDIGQVWGWGYGGEGQLGLGSRI- 259
           GD N  +    +T  P   I  V++      HTLA +  G+V+ WG G  G+LG G+   
Sbjct: 438 GDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSST 497

Query: 260 ----RMVSSP---HPIPCIESSY---------------GKDRSAALSRGSVNSEG-PGFR 296
               +++  P     + C+ + Y               G+     L  G  NS   P   
Sbjct: 498 QKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557

Query: 297 VPGNYVKGIACGGRHSAVITDAGALL-TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
              + V  ++CG  H+  ++  G  + +FG G  G+ G G T+    P  + +L G+ I 
Sbjct: 558 KDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIR 617

Query: 356 GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL-PRLLDAPSLENVHSKSVSCG 414
            V AG   ++ ++S G VYA+G      LG G  +A  L P+L++   L       VS G
Sbjct: 618 KVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE--ELAATRIVDVSIG 673

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVI-DRNIPSQVT-IEGCVPRNVACGWWHTL 470
             H   ++ D +V+ WG N  GQ G G+       P +V+ ++G   + ++ G  H+L
Sbjct: 674 DSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 95/174 (54%), Gaps = 5/174 (2%)

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
           + I  G   + VI+  G++   G G YG+ G G ++++ +   ++      I+ V++   
Sbjct: 406 QTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKG 465

Query: 363 ---HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
              HT+  +++G+V+++G   +G+LG G    +  P+L+  P L+      VS G RH+A
Sbjct: 466 SDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCVSAGYRHSA 524

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
            + +DG+++ WG   +G+LG GD   RNIP+ V     V   V+CG  HT+ L+
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG-EVSCGSSHTIALS 577



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 112/251 (44%), Gaps = 31/251 (12%)

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
           T+ AG   T  +S  G V   G G  G+LGLG       S +     + ++   RS    
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLG------DSNNQSTLKKLTFEPHRSIKKV 460

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN 344
             S  S+G                  H+   T  G + ++G G YG+ G G++  +  P 
Sbjct: 461 SSSKGSDG------------------HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPK 502

Query: 345 CVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSL 403
            +   L G  +  V+AG  H+  ++ DG++Y +G   FG+LG G   +  +P L+    +
Sbjct: 503 LIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK--DI 560

Query: 404 ENVHSKSVSCGARHTAVIADDGK-VFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRN 461
            NV    VSCG+ HT  ++ DG+ V+ +G    G+LG GD      P  +  ++G   R 
Sbjct: 561 SNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK 618

Query: 462 VACGWWHTLLL 472
           V  G   +L L
Sbjct: 619 VCAGSQSSLAL 629



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 86/324 (26%), Positives = 130/324 (40%), Gaps = 67/324 (20%)

Query: 52  GGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVK-AAAGWA 108
           G  G  +A +   ++ +WG  D   LG    ++ K+   P+    P +  +V   +AG+ 
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY---PKLIQGPLQGKVVVCVSAGYR 521

Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRS 168
           H  AVTE GE+YTWG  +       FG L  G     D   R    L + +S   +VS  
Sbjct: 522 HSAAVTEDGELYTWGEGD-------FGRLGHG-----DSNSRNIPTLVKDISNVGEVSCG 569

Query: 169 SGGTSS-GTDGR-----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVR 222
           S  T +   DGR     G G+ G                  GD N    P ++    G+ 
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKL--------------GHGDTNRVYKPKVIEALQGMF 615

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V AG + +LAL+  GQV+ WG G    LG GS       P  I              
Sbjct: 616 IRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE------------- 660

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                         +    +  ++ G  H   ++    +  +G    GQCGQG++   ++
Sbjct: 661 -------------ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPIT 707

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTI 365
            P  VS L GI I+ ++AG  H++
Sbjct: 708 KPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 45.4 bits (106), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 4/89 (4%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           +S   +VY +G N   QL  G  +    P+L  APS  +  ++++  G   T VI+ DG 
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKL--APSFSD--AQTIEAGQYCTFVISTDGS 423

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
           V   G   YG+LGLGD  +++   ++T E
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFE 452


>gi|348687440|gb|EGZ27254.1| hypothetical protein PHYSODRAFT_358246 [Phytophthora sojae]
          Length = 545

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 89/279 (31%), Positives = 142/279 (50%), Gaps = 31/279 (11%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG----------------LGSRIRMVS-- 263
           RI  +A G  HT+ L+D G+V+ WG G +G+LG                 G  IR V+  
Sbjct: 35  RIVQIACGSGHTVVLTDEGEVYTWGRGDDGRLGHGDNGWKFVPRLVEELRGKNIRQVTCG 94

Query: 264 SPHPIPCIES----SYGKDRSAALSRGSVNSEGPGFRV---PGNYVKGIACGGRHSAVIT 316
           S H      S    ++G      L  G+       F V    G  V+ +ACG RH+ V+ 
Sbjct: 95  SYHTAAVTVSGDLYTWGGGMYGKLGHGNETGHSTPFLVETLKGMQVRQVACGSRHTVVLL 154

Query: 317 DAGALLTFGWGLYGQCGQGSTD-DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYA 375
           +   + T+G    G  G G T+  +  P  V  L G  I  ++A  +HT  +S  G+V+ 
Sbjct: 155 ENKDVYTWGDKENGVSGHGDTEGHQYLPCPVEELRGKNIVQISACGFHTAALSEFGEVFT 214

Query: 376 FGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKY 435
           FG  +FG+LG   ++ + + R ++A + + V  K V+CG  HTA + + G+V+ WG  ++
Sbjct: 215 FGEGKFGRLGHNSERNQPVARFVEALAGKRV--KQVACGGFHTAAVTETGEVYTWGGGEH 272

Query: 436 GQLGLGDVIDRNIPSQVT--IEGCVPRNVACGWWHTLLL 472
           GQLG GD +++ +P++V   +E  V + + CGW HT+ L
Sbjct: 273 GQLGHGDKVNKTVPTRVESLVEKLVVQ-ITCGWSHTVAL 310



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 123/417 (29%), Positives = 181/417 (43%), Gaps = 61/417 (14%)

Query: 66  LITWGSTDD----LGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYT 121
           + +WG  +D    LG    TS +H   P P     E  IV+ A G  H V +T+ GEVYT
Sbjct: 3   VYSWGRGEDGQLGLGD---TSDQHR--PVPIDALAERRIVQIACGSGHTVVLTDEGEVYT 57

Query: 122 WGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGR-G 180
           WG  +    GR+ G    G      + E        QV+  S    ++  T SG     G
Sbjct: 58  WGRGD---DGRL-GHGDNGWKFVPRLVEELRGKNIRQVTCGSY--HTAAVTVSGDLYTWG 111

Query: 181 SGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIG 240
            G  G                  G+E   + P LV    G+++  VA G RHT+ L +  
Sbjct: 112 GGMYGKL--------------GHGNETGHSTPFLVETLKGMQVRQVACGSRHTVVLLENK 157

Query: 241 QVWGWGYGGEGQLGLGSRIRMVSSPHPIPC-IESSYGKDRSAALSRGSVNSEGPGFRVPG 299
            V+ WG    G  G G           +PC +E   GK                      
Sbjct: 158 DVYTWGDKENGVSGHGD----TEGHQYLPCPVEELRGK---------------------- 191

Query: 300 NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAA 359
           N V+  ACG  H+A +++ G + TFG G +G+ G  S  ++     V +L G +++ VA 
Sbjct: 192 NIVQISACG-FHTAALSEFGEVFTFGEGKFGRLGHNSERNQPVARFVEALAGKRVKQVAC 250

Query: 360 GLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
           G +HT  ++  G+VY +GG + GQLG G    +T+P  ++  SL       ++CG  HT 
Sbjct: 251 GGFHTAAVTETGEVYTWGGGEHGQLGHGDKVNKTVPTRVE--SLVEKLVVQITCGWSHTV 308

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLAVP 475
            + D G+V+ WG   +G+LG  D     +P  V  +EG    +VA    HT+ L  P
Sbjct: 309 ALTDTGEVYTWGNGDHGKLGHNDTTKVTLPKLVDVLEGKRVISVASYNEHTVALVDP 365



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 109/383 (28%), Positives = 164/383 (42%), Gaps = 72/383 (18%)

Query: 53  GCGFAMAISDSRKLITWGSTDD--LGQSYVTSGKHGE-----IPEPFPLPTEASIVKAAA 105
           G G  + ++D  ++ TWG  DD  LG        HG+     +P         +I +   
Sbjct: 42  GSGHTVVLTDEGEVYTWGRGDDGRLG--------HGDNGWKFVPRLVEELRGKNIRQVTC 93

Query: 106 GWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTG--TGLDKDVFERQSSFLTEQVS--P 161
           G  H  AVT  G++YTWG       G ++G L  G  TG         + FL E +    
Sbjct: 94  GSYHTAAVTVSGDLYTWG-------GGMYGKLGHGNETG-------HSTPFLVETLKGMQ 139

Query: 162 RSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGD-ENLSAFPCLVTLNPG 220
             QV+  S  T    + +     G K   +S           GD E     PC V    G
Sbjct: 140 VRQVACGSRHTVVLLENKDVYTWGDKENGVS---------GHGDTEGHQYLPCPVEELRG 190

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
             I  ++A G HT ALS+ G+V+ +G G  G+LG                    +  +R+
Sbjct: 191 KNIVQISACGFHTAALSEFGEVFTFGEGKFGRLG--------------------HNSERN 230

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
             ++R  V +      + G  VK +ACGG H+A +T+ G + T+G G +GQ G G   ++
Sbjct: 231 QPVAR-FVEA------LAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGHGDKVNK 283

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
             P  V SL+   +  +  G  HT+ ++  G+VY +G    G+LG       TLP+L+D 
Sbjct: 284 TVPTRVESLVEKLVVQITCGWSHTVALTDTGEVYTWGNGDHGKLGHNDTTKVTLPKLVDV 343

Query: 401 PSLENVHSKSVSCGARHTAVIAD 423
             LE     SV+    HT  + D
Sbjct: 344 --LEGKRVISVASYNEHTVALVD 364



 Score = 43.9 bits (102), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 2/102 (1%)

Query: 22  GALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVT 81
           G L   S    P+   +    G   + V  GG   A A++++ ++ TWG  +  GQ    
Sbjct: 221 GRLGHNSERNQPVARFVEALAGKRVKQVACGGFHTA-AVTETGEVYTWGGGEH-GQLGHG 278

Query: 82  SGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
              +  +P       E  +V+   GW+H VA+T+ GEVYTWG
Sbjct: 279 DKVNKTVPTRVESLVEKLVVQITCGWSHTVALTDTGEVYTWG 320


>gi|431895932|gb|ELK05350.1| Putative E3 ubiquitin-protein ligase HERC1 [Pteropus alecto]
          Length = 4850

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 85/244 (34%), Positives = 128/244 (52%), Gaps = 31/244 (12%)

Query: 232  HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
            H++AL++ G+V+ WG G  G+LG G+  R    P  I  ++                   
Sbjct: 4082 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQ------------------- 4121

Query: 292  GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                   G  V  ++CG +HSAV+T  G L TFG G YG+ G G+T ++  P  V++L G
Sbjct: 4122 -------GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4174

Query: 352  IQIEGVAAGLWHTICISSDGD-VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
             QI  VA GL HT+ +S+DG  V+AFG   +G+LG G   A++ P+ +D   L  +  K 
Sbjct: 4175 YQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDV--LCGIGIKK 4232

Query: 411  VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            V+CG + +  +  DG V+ +G ++   L  G   + N P Q+  + G V  +VA G  HT
Sbjct: 4233 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHT 4292

Query: 470  LLLA 473
            L LA
Sbjct: 4293 LALA 4296



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 112/233 (48%), Gaps = 36/233 (15%)

Query: 242  VWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNY 301
            V+ WG G  GQL    R  MV +                            P F    + 
Sbjct: 3988 VYLWGAGRHGQLAEAGRNVMVPAA--------------------------APSF----SQ 4017

Query: 302  VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
             + + CG   + VI   G +L  G G YG+ GQG++DD      +S+L G  +  +    
Sbjct: 4018 AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSC 4077

Query: 362  ---WHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
                H++ ++  G+V+++G   +G+LG G    +  PR ++A   E V    +SCG +H+
Sbjct: 4078 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEV--VQMSCGFKHS 4135

Query: 419  AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
            AV+  DGK+F +G   YG+LGLG+  ++ +P +VT +EG     VACG  HTL
Sbjct: 4136 AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTL 4188



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 164/393 (41%), Gaps = 75/393 (19%)

Query: 41   TVGSAWRDVCGGGCGFAMAISD--------SRKLITWGSTDDLGQSYVTSGKHGEIPEPF 92
            +   A + +CG  C F +  +         S   +  G++DDL    V S   G +    
Sbjct: 4014 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVV--- 4070

Query: 93   PLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQS 152
                   +V +     H +A+TE GEV++WG  +       +G L  G   D+    RQ 
Sbjct: 4071 -----TQLVTSCGSDGHSMALTESGEVFSWGDGD-------YGKLGHGNS-DRQRRPRQI 4117

Query: 153  SFLT-EQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDEN 207
              L  E+V   S   + S   +S  DG+    G+G+ G    R+ L          G+ +
Sbjct: 4118 EALQGEEVVQMSCGFKHSAVVTS--DGKLFTFGNGDYG----RLGL----------GNTS 4161

Query: 208  LSAFPCLVTLNPGVRIATVAAGGRHTLALS-DIGQVWGWGYGGEGQLGLGSRIRMVSSPH 266
                P  VT   G +I  VA G  HTLA+S D   VW +G G  G+LGLG+     SSP 
Sbjct: 4162 NKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK-SSPQ 4220

Query: 267  PIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGW 326
             +  +                           G  +K +ACG + S  +T  G + TFG 
Sbjct: 4221 KVDVL--------------------------CGIGIKKVACGTQFSVALTKDGHVYTFGQ 4254

Query: 327  GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
                   +G   +   P  +  L G+ IE VA G  HT+ ++S GDVYA+G N  GQLG 
Sbjct: 4255 DRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL 4314

Query: 387  GGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            G       P L+     +NV  + +S G  H+A
Sbjct: 4315 GHTNHVREPTLVTVLQGKNV--RQISAGRCHSA 4345



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 95/174 (54%), Gaps = 5/174 (2%)

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
           + I  G   + VI+  G++   G G YG+ G G ++++ +   ++      I+ V++   
Sbjct: 406 QTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKG 465

Query: 363 ---HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
              HT+  +++G+V+++G   +G+LG G    +  P+L+  P L+      VS G RH+A
Sbjct: 466 SDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCVSAGYRHSA 524

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
            + +DG+++ WG   +G+LG GD   RNIP+ V     V   V+CG  HT+ L+
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG-EVSCGSSHTIALS 577



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 132/298 (44%), Gaps = 35/298 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAG---GRHTLALSDIGQVWGWGYGGEGQLGLGSRI- 259
           GD N  +    +T  P   I  V++      HTLA +  G+V+ WG G  G+LG G+   
Sbjct: 438 GDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSST 497

Query: 260 ----RMVSSP---HPIPCIESSY---------------GKDRSAALSRGSVNSEG-PGFR 296
               +++  P     + C+ + Y               G+     L  G  NS   P   
Sbjct: 498 QKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557

Query: 297 VPGNYVKGIACGGRHSAVITDAGALL-TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
              + V  ++CG  H+  ++  G  + +FG G  G+ G G T+    P  + +L G+ I 
Sbjct: 558 KDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIR 617

Query: 356 GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL-PRLLDAPSLENVHSKSVSCG 414
            V AG   ++ ++S G VYA+G      LG G  +A  L P+L++   L       +S G
Sbjct: 618 KVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE--ELAATRIVDISIG 673

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVI-DRNIPSQVT-IEGCVPRNVACGWWHTL 470
             H   ++ D +V+ WG N  GQ G G+       P +V+ ++G   + ++ G  H+L
Sbjct: 674 DSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 112/251 (44%), Gaps = 31/251 (12%)

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
           T+ AG   T  +S  G V   G G  G+LGLG       S +     + ++   RS    
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLG------DSNNQSTLKKLTFEPHRSIKKV 460

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN 344
             S  S+G                  H+   T  G + ++G G YG+ G G++  +  P 
Sbjct: 461 SSSKGSDG------------------HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPK 502

Query: 345 CVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSL 403
            +   L G  +  V+AG  H+  ++ DG++Y +G   FG+LG G   +  +P L+    +
Sbjct: 503 LIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK--DI 560

Query: 404 ENVHSKSVSCGARHTAVIADDGK-VFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRN 461
            NV    VSCG+ HT  ++ DG+ V+ +G    G+LG GD      P  +  ++G   R 
Sbjct: 561 SNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK 618

Query: 462 VACGWWHTLLL 472
           V  G   +L L
Sbjct: 619 VCAGSQSSLAL 629



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 130/324 (40%), Gaps = 67/324 (20%)

Query: 52  GGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVK-AAAGWA 108
           G  G  +A +   ++ +WG  D   LG    ++ K+   P+    P +  +V   +AG+ 
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY---PKLIQGPLQGKVVVCVSAGYR 521

Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRS 168
           H  AVTE GE+YTWG  +       FG L  G     D   R    L + +S   +VS  
Sbjct: 522 HSAAVTEDGELYTWGEGD-------FGRLGHG-----DSNSRNIPTLVKDISNVGEVSCG 569

Query: 169 SGGTSS-GTDGR-----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVR 222
           S  T +   DGR     G G+ G                  GD N    P ++    G+ 
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKL--------------GHGDTNRVYKPKVIEALQGMF 615

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V AG + +LAL+  GQV+ WG G    LG GS       P  I              
Sbjct: 616 IRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE------------- 660

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                         +    +  I+ G  H   ++    +  +G    GQCGQG++   ++
Sbjct: 661 -------------ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPIT 707

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTI 365
            P  VS L GI I+ ++AG  H++
Sbjct: 708 KPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 45.4 bits (106), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 4/89 (4%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           +S   +VY +G N   QL  G  +    P+L  APS  +  ++++  G   T VI+ DG 
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKL--APSFSD--AQTIEAGQYCTFVISTDGS 423

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
           V   G   YG+LGLGD  +++   ++T E
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFE 452


>gi|395822793|ref|XP_003784693.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Otolemur
            garnettii]
          Length = 4828

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 85/244 (34%), Positives = 128/244 (52%), Gaps = 31/244 (12%)

Query: 232  HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
            H++AL++ G+V+ WG G  G+LG G+  R    P  I  ++                   
Sbjct: 4060 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQ------------------- 4099

Query: 292  GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                   G  V  ++CG +HSAV+T  G L TFG G YG+ G G+T ++  P  V++L G
Sbjct: 4100 -------GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4152

Query: 352  IQIEGVAAGLWHTICISSDGD-VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
             QI  VA GL HT+ +S+DG  V+AFG   +G+LG G   A++ P+ +D   L  +  K 
Sbjct: 4153 YQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDV--LCGIGIKK 4210

Query: 411  VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            V+CG + +  +  DG V+ +G ++   L  G   + N P Q+  + G V  +VA G  HT
Sbjct: 4211 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHT 4270

Query: 470  LLLA 473
            L LA
Sbjct: 4271 LALA 4274



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 105/200 (52%), Gaps = 6/200 (3%)

Query: 275  YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
            +G  R   L+    N   P      +  + + CG   + VI   G +L  G G YG+ GQ
Sbjct: 3969 WGAGRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQ 4028

Query: 335  GSTDDELSPNCVSSLLGIQIEGVAAGL---WHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
            G++DD      +S+L G  +  +        H++ ++  G+V+++G   +G+LG G    
Sbjct: 4029 GNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDR 4088

Query: 392  ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
            +  PR ++A   E V    +SCG +H+AV+  DGK+F +G   YG+LGLG+  ++ +P +
Sbjct: 4089 QRRPRQIEALQGEEV--VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPER 4146

Query: 452  VT-IEGCVPRNVACGWWHTL 470
            VT +EG     VACG  HTL
Sbjct: 4147 VTALEGYQIGQVACGLNHTL 4166



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 111/393 (28%), Positives = 165/393 (41%), Gaps = 75/393 (19%)

Query: 41   TVGSAWRDVCGGGCGFAMAISD--------SRKLITWGSTDDLGQSYVTSGKHGEIPEPF 92
            +   A + +CG  C F +  +         S   +  G++DDL    V S   G +    
Sbjct: 3992 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVV--- 4048

Query: 93   PLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQS 152
                   +V +     H +A+TE GEV++WG  +       +G L  G   D+    RQ 
Sbjct: 4049 -----TQLVTSCGSDGHSMALTESGEVFSWGDGD-------YGKLGHGNS-DRQRRPRQI 4095

Query: 153  SFLT-EQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDEN 207
              L  E+V   S   + S   +S  DG+    G+G+ G    R+ L          G+ +
Sbjct: 4096 EALQGEEVVQMSCGFKHSAVVTS--DGKLFTFGNGDYG----RLGL----------GNTS 4139

Query: 208  LSAFPCLVTLNPGVRIATVAAGGRHTLALS-DIGQVWGWGYGGEGQLGLGSRIRMVSSPH 266
                P  VT   G +I  VA G  HTLA+S D   VW +G G  G+LGLG+     SSP 
Sbjct: 4140 NKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK-SSPQ 4198

Query: 267  PIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGW 326
             +  +                           G  +K +ACG + S  +T  G + TFG 
Sbjct: 4199 KVDVL--------------------------CGIGIKKVACGTQFSVALTKDGHVYTFGQ 4232

Query: 327  GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
                   +G   +   P  +  L G+ IE VA G  HT+ ++S+GDVYA+G N  GQLG 
Sbjct: 4233 DRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL 4292

Query: 387  GGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            G       P L+     +N+  + +S G  H+A
Sbjct: 4293 GHTNHVREPTLVTVLQGKNI--RQISAGRCHSA 4323



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 95/174 (54%), Gaps = 5/174 (2%)

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
           + I  G   + VI+  G++   G G YG+ G G ++++ +   ++      I+ V++   
Sbjct: 406 QTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKG 465

Query: 363 ---HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
              HT+  +++G+V+++G   +G+LG G    +  P+L+  P L+      VS G RH+A
Sbjct: 466 SDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCVSAGYRHSA 524

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
            + +DG+++ WG   +G+LG GD   RNIP+ V     V   V+CG  HT+ L+
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG-EVSCGSSHTIALS 577



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 132/298 (44%), Gaps = 35/298 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAG---GRHTLALSDIGQVWGWGYGGEGQLGLGSRI- 259
           GD N  +    +T  P   I  V++      HTLA +  G+V+ WG G  G+LG G+   
Sbjct: 438 GDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSST 497

Query: 260 ----RMVSSP---HPIPCIESSY---------------GKDRSAALSRGSVNSEG-PGFR 296
               +++  P     + C+ + Y               G+     L  G  NS   P   
Sbjct: 498 QKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557

Query: 297 VPGNYVKGIACGGRHSAVITDAGALL-TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
              + V  ++CG  H+  ++  G  + +FG G  G+ G G T+    P  + +L G+ I 
Sbjct: 558 KDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIR 617

Query: 356 GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL-PRLLDAPSLENVHSKSVSCG 414
            V AG   ++ ++S G VYA+G      LG G  +A  L P+L++   L       +S G
Sbjct: 618 KVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE--ELAATRIVDISIG 673

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVI-DRNIPSQVT-IEGCVPRNVACGWWHTL 470
             H   ++ D +V+ WG N  GQ G G+       P +V+ ++G   + ++ G  H+L
Sbjct: 674 DSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 112/251 (44%), Gaps = 31/251 (12%)

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
           T+ AG   T  +S  G V   G G  G+LGLG       S +     + ++   RS    
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLG------DSNNQSTLKKLTFEPHRSIKKV 460

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN 344
             S  S+G                  H+   T  G + ++G G YG+ G G++  +  P 
Sbjct: 461 SSSKGSDG------------------HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPK 502

Query: 345 CVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSL 403
            +   L G  +  V+AG  H+  ++ DG++Y +G   FG+LG G   +  +P L+    +
Sbjct: 503 LIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK--DI 560

Query: 404 ENVHSKSVSCGARHTAVIADDGK-VFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRN 461
            NV    VSCG+ HT  ++ DG+ V+ +G    G+LG GD      P  +  ++G   R 
Sbjct: 561 SNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK 618

Query: 462 VACGWWHTLLL 472
           V  G   +L L
Sbjct: 619 VCAGSQSSLAL 629



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 130/324 (40%), Gaps = 67/324 (20%)

Query: 52  GGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVK-AAAGWA 108
           G  G  +A +   ++ +WG  D   LG    ++ K+   P+    P +  +V   +AG+ 
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY---PKLIQGPLQGKVVVCVSAGYR 521

Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRS 168
           H  AVTE GE+YTWG  +       FG L  G     D   R    L + +S   +VS  
Sbjct: 522 HSAAVTEDGELYTWGEGD-------FGRLGHG-----DSNSRNIPTLVKDISNVGEVSCG 569

Query: 169 SGGTSS-GTDGR-----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVR 222
           S  T +   DGR     G G+ G                  GD N    P ++    G+ 
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKL--------------GHGDTNRVYKPKVIEALQGMF 615

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V AG + +LAL+  GQV+ WG G    LG GS       P  I              
Sbjct: 616 IRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE------------- 660

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                         +    +  I+ G  H   ++    +  +G    GQCGQG++   ++
Sbjct: 661 -------------ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPIT 707

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTI 365
            P  VS L GI I+ ++AG  H++
Sbjct: 708 KPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 45.4 bits (106), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 4/89 (4%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           +S   +VY +G N   QL  G  +    P+L  APS  +  ++++  G   T VI+ DG 
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKL--APSFSD--AQTIEAGQYCTFVISTDGS 423

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
           V   G   YG+LGLGD  +++   ++T E
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFE 452


>gi|383422561|gb|AFH34494.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4853

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 84/244 (34%), Positives = 128/244 (52%), Gaps = 31/244 (12%)

Query: 232  HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
            H++AL++ G+V+ WG G  G+LG G+  R    P  I  ++                   
Sbjct: 4085 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQ------------------- 4124

Query: 292  GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                   G  V  ++CG +HSAV+T  G L TFG G YG+ G G+T ++  P  V++L G
Sbjct: 4125 -------GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4177

Query: 352  IQIEGVAAGLWHTICISSDGD-VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
             QI  VA GL HT+ +S+DG  V+AFG   +G+LG G   A++ P+ +D   L  +  K 
Sbjct: 4178 YQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDV--LCGIGIKK 4235

Query: 411  VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            V+CG + +  +  DG V+ +G ++   L  G   + N P Q+  + G +  +VA G  HT
Sbjct: 4236 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHT 4295

Query: 470  LLLA 473
            L LA
Sbjct: 4296 LALA 4299



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 112/233 (48%), Gaps = 36/233 (15%)

Query: 242  VWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNY 301
            V+ WG G  GQL    R  MV +                            P F    + 
Sbjct: 3991 VYLWGAGRHGQLAEAGRNVMVPAA--------------------------APSF----SQ 4020

Query: 302  VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
             + + CG   + VI   G +L  G G YG+ GQG++DD      +S+L G  +  +    
Sbjct: 4021 AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSC 4080

Query: 362  ---WHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
                H++ ++  G+V+++G   +G+LG G    +  PR ++A   E V    +SCG +H+
Sbjct: 4081 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEV--VQMSCGFKHS 4138

Query: 419  AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
            AV+  DGK+F +G   YG+LGLG+  ++ +P +VT +EG     VACG  HTL
Sbjct: 4139 AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTL 4191



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 113/393 (28%), Positives = 165/393 (41%), Gaps = 75/393 (19%)

Query: 41   TVGSAWRDVCGGGCGFAMAISD--------SRKLITWGSTDDLGQSYVTSGKHGEIPEPF 92
            +   A + +CG  C F +  +         S   +  G++DDL    V S   G +    
Sbjct: 4017 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVV--- 4073

Query: 93   PLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQS 152
                   +V +     H +A+TE GEV++WG  +       +G L  G   D+    RQ 
Sbjct: 4074 -----TQLVTSCGSDGHSMALTESGEVFSWGDGD-------YGKLGHGNS-DRQRRPRQI 4120

Query: 153  SFLT-EQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDEN 207
              L  E+V   S   + S   +S  DG+    G+G+ G    R+ L          G+ +
Sbjct: 4121 EALQGEEVVQMSCGFKHSAVVTS--DGKLFTFGNGDYG----RLGL----------GNTS 4164

Query: 208  LSAFPCLVTLNPGVRIATVAAGGRHTLALS-DIGQVWGWGYGGEGQLGLGSRIRMVSSPH 266
                P  VT   G +I  VA G  HTLA+S D   VW +G G  G+LGLG+     SSP 
Sbjct: 4165 NKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK-SSPQ 4223

Query: 267  PIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGW 326
             I  +                           G  +K +ACG + S  +T  G + TFG 
Sbjct: 4224 KIDVL--------------------------CGIGIKKVACGTQFSVALTKDGHVYTFGQ 4257

Query: 327  GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
                   +G   +   P  +  L G+ IE VA G  HT+ ++S+GDVYA+G N  GQLG 
Sbjct: 4258 DRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL 4317

Query: 387  GGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            G       P L+     +NV  + +S G  H+A
Sbjct: 4318 GHTNHVREPTLVTGLQGKNV--RQISAGRCHSA 4348



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 132/298 (44%), Gaps = 35/298 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAG---GRHTLALSDIGQVWGWGYGGEGQLGLGSRI- 259
           GD N  +    +T  P   I  V++      HTLA +  G+V+ WG G  G+LG G+   
Sbjct: 438 GDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSST 497

Query: 260 ----RMVSSP---HPIPCIESSY---------------GKDRSAALSRGSVNSEG-PGFR 296
               +++  P     + C+ + Y               G+     L  G  NS   P   
Sbjct: 498 QKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557

Query: 297 VPGNYVKGIACGGRHSAVITDAGALL-TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
              + V  ++CG  H+  ++  G  + +FG G  G+ G G T+    P  + +L G+ I 
Sbjct: 558 KDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIR 617

Query: 356 GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL-PRLLDAPSLENVHSKSVSCG 414
            V AG   ++ ++S G VYA+G      LG G  +A  L P+L++   L       VS G
Sbjct: 618 KVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE--ELAATRIVDVSIG 673

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVI-DRNIPSQVT-IEGCVPRNVACGWWHTL 470
             H   ++ D +V+ WG N  GQ G G+       P +V+ ++G   + ++ G  H+L
Sbjct: 674 DSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 95/174 (54%), Gaps = 5/174 (2%)

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
           + I  G   + VI+  G++   G G YG+ G G ++++ +   ++      I+ V++   
Sbjct: 406 QTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKG 465

Query: 363 ---HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
              HT+  +++G+V+++G   +G+LG G    +  P+L+  P L+      VS G RH+A
Sbjct: 466 SDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCVSAGYRHSA 524

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
            + +DG+++ WG   +G+LG GD   RNIP+ V     V   V+CG  HT+ L+
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG-EVSCGSSHTIALS 577



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 112/251 (44%), Gaps = 31/251 (12%)

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
           T+ AG   T  +S  G V   G G  G+LGLG       S +     + ++   RS    
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLG------DSNNQSTLKKLTFEPHRSIKKV 460

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN 344
             S  S+G                  H+   T  G + ++G G YG+ G G++  +  P 
Sbjct: 461 SSSKGSDG------------------HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPK 502

Query: 345 CVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSL 403
            +   L G  +  V+AG  H+  ++ DG++Y +G   FG+LG G   +  +P L+    +
Sbjct: 503 LIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK--DI 560

Query: 404 ENVHSKSVSCGARHTAVIADDGK-VFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRN 461
            NV    VSCG+ HT  ++ DG+ V+ +G    G+LG GD      P  +  ++G   R 
Sbjct: 561 SNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK 618

Query: 462 VACGWWHTLLL 472
           V  G   +L L
Sbjct: 619 VCAGSQSSLAL 629



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 86/324 (26%), Positives = 130/324 (40%), Gaps = 67/324 (20%)

Query: 52  GGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVK-AAAGWA 108
           G  G  +A +   ++ +WG  D   LG    ++ K+   P+    P +  +V   +AG+ 
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY---PKLIQGPLQGKVVVCVSAGYR 521

Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRS 168
           H  AVTE GE+YTWG  +       FG L  G     D   R    L + +S   +VS  
Sbjct: 522 HSAAVTEDGELYTWGEGD-------FGRLGHG-----DSNSRNIPTLVKDISNVGEVSCG 569

Query: 169 SGGTSS-GTDGR-----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVR 222
           S  T +   DGR     G G+ G                  GD N    P ++    G+ 
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKL--------------GHGDTNRVYKPKVIEALQGMF 615

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V AG + +LAL+  GQV+ WG G    LG GS       P  I              
Sbjct: 616 IRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE------------- 660

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                         +    +  ++ G  H   ++    +  +G    GQCGQG++   ++
Sbjct: 661 -------------ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPIT 707

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTI 365
            P  VS L GI I+ ++AG  H++
Sbjct: 708 KPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 45.4 bits (106), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 4/89 (4%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           +S   +VY +G N   QL  G  +    P+L  APS  +  ++++  G   T VI+ DG 
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKL--APSFSD--AQTIEAGQYCTFVISTDGS 423

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
           V   G   YG+LGLGD  +++   ++T E
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFE 452


>gi|380817672|gb|AFE80710.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4854

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 84/244 (34%), Positives = 128/244 (52%), Gaps = 31/244 (12%)

Query: 232  HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
            H++AL++ G+V+ WG G  G+LG G+  R    P  I  ++                   
Sbjct: 4086 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQ------------------- 4125

Query: 292  GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                   G  V  ++CG +HSAV+T  G L TFG G YG+ G G+T ++  P  V++L G
Sbjct: 4126 -------GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4178

Query: 352  IQIEGVAAGLWHTICISSDGD-VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
             QI  VA GL HT+ +S+DG  V+AFG   +G+LG G   A++ P+ +D   L  +  K 
Sbjct: 4179 YQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDV--LCGIGIKK 4236

Query: 411  VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            V+CG + +  +  DG V+ +G ++   L  G   + N P Q+  + G +  +VA G  HT
Sbjct: 4237 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHT 4296

Query: 470  LLLA 473
            L LA
Sbjct: 4297 LALA 4300



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 112/233 (48%), Gaps = 36/233 (15%)

Query: 242  VWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNY 301
            V+ WG G  GQL    R  MV +                            P F    + 
Sbjct: 3992 VYLWGAGRHGQLAEAGRNVMVPAA--------------------------APSF----SQ 4021

Query: 302  VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
             + + CG   + VI   G +L  G G YG+ GQG++DD      +S+L G  +  +    
Sbjct: 4022 AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSC 4081

Query: 362  ---WHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
                H++ ++  G+V+++G   +G+LG G    +  PR ++A   E V    +SCG +H+
Sbjct: 4082 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEV--VQMSCGFKHS 4139

Query: 419  AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
            AV+  DGK+F +G   YG+LGLG+  ++ +P +VT +EG     VACG  HTL
Sbjct: 4140 AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTL 4192



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 113/393 (28%), Positives = 165/393 (41%), Gaps = 75/393 (19%)

Query: 41   TVGSAWRDVCGGGCGFAMAISD--------SRKLITWGSTDDLGQSYVTSGKHGEIPEPF 92
            +   A + +CG  C F +  +         S   +  G++DDL    V S   G +    
Sbjct: 4018 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVV--- 4074

Query: 93   PLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQS 152
                   +V +     H +A+TE GEV++WG  +       +G L  G   D+    RQ 
Sbjct: 4075 -----TQLVTSCGSDGHSMALTESGEVFSWGDGD-------YGKLGHGNS-DRQRRPRQI 4121

Query: 153  SFLT-EQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDEN 207
              L  E+V   S   + S   +S  DG+    G+G+ G    R+ L          G+ +
Sbjct: 4122 EALQGEEVVQMSCGFKHSAVVTS--DGKLFTFGNGDYG----RLGL----------GNTS 4165

Query: 208  LSAFPCLVTLNPGVRIATVAAGGRHTLALS-DIGQVWGWGYGGEGQLGLGSRIRMVSSPH 266
                P  VT   G +I  VA G  HTLA+S D   VW +G G  G+LGLG+     SSP 
Sbjct: 4166 NKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK-SSPQ 4224

Query: 267  PIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGW 326
             I  +                           G  +K +ACG + S  +T  G + TFG 
Sbjct: 4225 KIDVL--------------------------CGIGIKKVACGTQFSVALTKDGHVYTFGQ 4258

Query: 327  GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
                   +G   +   P  +  L G+ IE VA G  HT+ ++S+GDVYA+G N  GQLG 
Sbjct: 4259 DRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL 4318

Query: 387  GGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            G       P L+     +NV  + +S G  H+A
Sbjct: 4319 GHTNHVREPTLVTGLQGKNV--RQISAGRCHSA 4349



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 95/174 (54%), Gaps = 5/174 (2%)

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
           + I  G   + VI+  G++   G G YG+ G G ++++ +   ++      I+ V++   
Sbjct: 406 QTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKG 465

Query: 363 ---HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
              HT+  +++G+V+++G   +G+LG G    +  P+L+  P L+      VS G RH+A
Sbjct: 466 SDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCVSAGYRHSA 524

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
            + +DG+++ WG   +G+LG GD   RNIP+ V     V   V+CG  HT+ L+
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG-EVSCGSSHTIALS 577



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 132/298 (44%), Gaps = 35/298 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAG---GRHTLALSDIGQVWGWGYGGEGQLGLGSRI- 259
           GD N  +    +T  P   I  V++      HTLA +  G+V+ WG G  G+LG G+   
Sbjct: 438 GDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSST 497

Query: 260 ----RMVSSP---HPIPCIESSY---------------GKDRSAALSRGSVNSEG-PGFR 296
               +++  P     + C+ + Y               G+     L  G  NS   P   
Sbjct: 498 QKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557

Query: 297 VPGNYVKGIACGGRHSAVITDAGALL-TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
              + V  ++CG  H+  ++  G  + +FG G  G+ G G T+    P  + +L G+ I 
Sbjct: 558 KDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIR 617

Query: 356 GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL-PRLLDAPSLENVHSKSVSCG 414
            V AG   ++ ++S G VYA+G      LG G  +A  L P+L++   L       VS G
Sbjct: 618 KVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE--ELAATRIVDVSIG 673

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVI-DRNIPSQVT-IEGCVPRNVACGWWHTL 470
             H   ++ D +V+ WG N  GQ G G+       P +V+ ++G   + ++ G  H+L
Sbjct: 674 DSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 112/251 (44%), Gaps = 31/251 (12%)

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
           T+ AG   T  +S  G V   G G  G+LGLG       S +     + ++   RS    
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLG------DSNNQSTLKKLTFEPHRSIKKV 460

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN 344
             S  S+G                  H+   T  G + ++G G YG+ G G++  +  P 
Sbjct: 461 SSSKGSDG------------------HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPK 502

Query: 345 CVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSL 403
            +   L G  +  V+AG  H+  ++ DG++Y +G   FG+LG G   +  +P L+    +
Sbjct: 503 LIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK--DI 560

Query: 404 ENVHSKSVSCGARHTAVIADDGK-VFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRN 461
            NV    VSCG+ HT  ++ DG+ V+ +G    G+LG GD      P  +  ++G   R 
Sbjct: 561 SNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK 618

Query: 462 VACGWWHTLLL 472
           V  G   +L L
Sbjct: 619 VCAGSQSSLAL 629



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 86/324 (26%), Positives = 130/324 (40%), Gaps = 67/324 (20%)

Query: 52  GGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVK-AAAGWA 108
           G  G  +A +   ++ +WG  D   LG    ++ K+   P+    P +  +V   +AG+ 
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY---PKLIQGPLQGKVVVCVSAGYR 521

Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRS 168
           H  AVTE GE+YTWG  +       FG L  G     D   R    L + +S   +VS  
Sbjct: 522 HSAAVTEDGELYTWGEGD-------FGRLGHG-----DSNSRNIPTLVKDISNVGEVSCG 569

Query: 169 SGGTSS-GTDGR-----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVR 222
           S  T +   DGR     G G+ G                  GD N    P ++    G+ 
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKL--------------GHGDTNRVYKPKVIEALQGMF 615

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V AG + +LAL+  GQV+ WG G    LG GS       P  I              
Sbjct: 616 IRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE------------- 660

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                         +    +  ++ G  H   ++    +  +G    GQCGQG++   ++
Sbjct: 661 -------------ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPIT 707

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTI 365
            P  VS L GI I+ ++AG  H++
Sbjct: 708 KPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 45.4 bits (106), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 4/89 (4%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           +S   +VY +G N   QL  G  +    P+L  APS  +  ++++  G   T VI+ DG 
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKL--APSFSD--AQTIEAGQYCTFVISTDGS 423

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
           V   G   YG+LGLGD  +++   ++T E
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFE 452


>gi|297296624|ref|XP_002804832.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Macaca
            mulatta]
          Length = 4824

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 84/244 (34%), Positives = 128/244 (52%), Gaps = 31/244 (12%)

Query: 232  HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
            H++AL++ G+V+ WG G  G+LG G+  R    P  I  ++                   
Sbjct: 4056 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQ------------------- 4095

Query: 292  GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                   G  V  ++CG +HSAV+T  G L TFG G YG+ G G+T ++  P  V++L G
Sbjct: 4096 -------GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4148

Query: 352  IQIEGVAAGLWHTICISSDGD-VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
             QI  VA GL HT+ +S+DG  V+AFG   +G+LG G   A++ P+ +D   L  +  K 
Sbjct: 4149 YQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDV--LCGIGIKK 4206

Query: 411  VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            V+CG + +  +  DG V+ +G ++   L  G   + N P Q+  + G +  +VA G  HT
Sbjct: 4207 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHT 4266

Query: 470  LLLA 473
            L LA
Sbjct: 4267 LALA 4270



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 105/200 (52%), Gaps = 6/200 (3%)

Query: 275  YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
            +G  R   L+    N   P      +  + + CG   + VI   G +L  G G YG+ GQ
Sbjct: 3965 WGAGRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQ 4024

Query: 335  GSTDDELSPNCVSSLLGIQIEGVAAGL---WHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
            G++DD      +S+L G  +  +        H++ ++  G+V+++G   +G+LG G    
Sbjct: 4025 GNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDR 4084

Query: 392  ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
            +  PR ++A   E V    +SCG +H+AV+  DGK+F +G   YG+LGLG+  ++ +P +
Sbjct: 4085 QRRPRQIEALQGEEV--VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPER 4142

Query: 452  VT-IEGCVPRNVACGWWHTL 470
            VT +EG     VACG  HTL
Sbjct: 4143 VTALEGYQIGQVACGLNHTL 4162



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 113/393 (28%), Positives = 165/393 (41%), Gaps = 75/393 (19%)

Query: 41   TVGSAWRDVCGGGCGFAMAISD--------SRKLITWGSTDDLGQSYVTSGKHGEIPEPF 92
            +   A + +CG  C F +  +         S   +  G++DDL    V S   G +    
Sbjct: 3988 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVV--- 4044

Query: 93   PLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQS 152
                   +V +     H +A+TE GEV++WG  +       +G L  G   D+    RQ 
Sbjct: 4045 -----TQLVTSCGSDGHSMALTESGEVFSWGDGD-------YGKLGHGNS-DRQRRPRQI 4091

Query: 153  SFLT-EQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDEN 207
              L  E+V   S   + S   +S  DG+    G+G+ G    R+ L          G+ +
Sbjct: 4092 EALQGEEVVQMSCGFKHSAVVTS--DGKLFTFGNGDYG----RLGL----------GNTS 4135

Query: 208  LSAFPCLVTLNPGVRIATVAAGGRHTLALS-DIGQVWGWGYGGEGQLGLGSRIRMVSSPH 266
                P  VT   G +I  VA G  HTLA+S D   VW +G G  G+LGLG+     SSP 
Sbjct: 4136 NKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK-SSPQ 4194

Query: 267  PIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGW 326
             I  +                           G  +K +ACG + S  +T  G + TFG 
Sbjct: 4195 KIDVL--------------------------CGIGIKKVACGTQFSVALTKDGHVYTFGQ 4228

Query: 327  GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
                   +G   +   P  +  L G+ IE VA G  HT+ ++S+GDVYA+G N  GQLG 
Sbjct: 4229 DRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL 4288

Query: 387  GGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            G       P L+     +NV  + +S G  H+A
Sbjct: 4289 GHTNHVREPTLVTGLQGKNV--RQISAGRCHSA 4319



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 95/174 (54%), Gaps = 5/174 (2%)

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
           + I  G   + VI+  G++   G G YG+ G G ++++ +   ++      I+ V++   
Sbjct: 406 QTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKG 465

Query: 363 ---HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
              HT+  +++G+V+++G   +G+LG G    +  P+L+  P L+      VS G RH+A
Sbjct: 466 SDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCVSAGYRHSA 524

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
            + +DG+++ WG   +G+LG GD   RNIP+ V     V   V+CG  HT+ L+
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG-EVSCGSSHTIALS 577



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 132/298 (44%), Gaps = 35/298 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAG---GRHTLALSDIGQVWGWGYGGEGQLGLGSRI- 259
           GD N  +    +T  P   I  V++      HTLA +  G+V+ WG G  G+LG G+   
Sbjct: 438 GDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSST 497

Query: 260 ----RMVSSP---HPIPCIESSY---------------GKDRSAALSRGSVNSEG-PGFR 296
               +++  P     + C+ + Y               G+     L  G  NS   P   
Sbjct: 498 QKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557

Query: 297 VPGNYVKGIACGGRHSAVITDAGALL-TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
              + V  ++CG  H+  ++  G  + +FG G  G+ G G T+    P  + +L G+ I 
Sbjct: 558 KDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIR 617

Query: 356 GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL-PRLLDAPSLENVHSKSVSCG 414
            V AG   ++ ++S G VYA+G      LG G  +A  L P+L++   L       VS G
Sbjct: 618 KVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE--ELAATRIVDVSIG 673

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVI-DRNIPSQVT-IEGCVPRNVACGWWHTL 470
             H   ++ D +V+ WG N  GQ G G+       P +V+ ++G   + ++ G  H+L
Sbjct: 674 DSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 112/251 (44%), Gaps = 31/251 (12%)

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
           T+ AG   T  +S  G V   G G  G+LGLG       S +     + ++   RS    
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLG------DSNNQSTLKKLTFEPHRSIKKV 460

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN 344
             S  S+G                  H+   T  G + ++G G YG+ G G++  +  P 
Sbjct: 461 SSSKGSDG------------------HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPK 502

Query: 345 CVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSL 403
            +   L G  +  V+AG  H+  ++ DG++Y +G   FG+LG G   +  +P L+    +
Sbjct: 503 LIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK--DI 560

Query: 404 ENVHSKSVSCGARHTAVIADDGK-VFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRN 461
            NV    VSCG+ HT  ++ DG+ V+ +G    G+LG GD      P  +  ++G   R 
Sbjct: 561 SNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK 618

Query: 462 VACGWWHTLLL 472
           V  G   +L L
Sbjct: 619 VCAGSQSSLAL 629



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 86/324 (26%), Positives = 130/324 (40%), Gaps = 67/324 (20%)

Query: 52  GGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVK-AAAGWA 108
           G  G  +A +   ++ +WG  D   LG    ++ K+   P+    P +  +V   +AG+ 
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY---PKLIQGPLQGKVVVCVSAGYR 521

Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRS 168
           H  AVTE GE+YTWG  +       FG L  G     D   R    L + +S   +VS  
Sbjct: 522 HSAAVTEDGELYTWGEGD-------FGRLGHG-----DSNSRNIPTLVKDISNVGEVSCG 569

Query: 169 SGGTSS-GTDGR-----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVR 222
           S  T +   DGR     G G+ G                  GD N    P ++    G+ 
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKL--------------GHGDTNRVYKPKVIEALQGMF 615

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V AG + +LAL+  GQV+ WG G    LG GS       P  I              
Sbjct: 616 IRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE------------- 660

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                         +    +  ++ G  H   ++    +  +G    GQCGQG++   ++
Sbjct: 661 -------------ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPIT 707

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTI 365
            P  VS L GI I+ ++AG  H++
Sbjct: 708 KPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 45.4 bits (106), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 4/89 (4%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           +S   +VY +G N   QL  G  +    P+L  APS  +  ++++  G   T VI+ DG 
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKL--APSFSD--AQTIEAGQYCTFVISTDGS 423

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
           V   G   YG+LGLGD  +++   ++T E
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFE 452


>gi|229442455|gb|AAI72910.1| guanine nucleotide exchange factor p532 [synthetic construct]
          Length = 2441

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 84/244 (34%), Positives = 128/244 (52%), Gaps = 31/244 (12%)

Query: 232  HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
            H++AL++ G+V+ WG G  G+LG G+  R    P  I  ++                   
Sbjct: 1673 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQ------------------- 1712

Query: 292  GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                   G  V  ++CG +HSAV+T  G L TFG G YG+ G G+T ++  P  V++L G
Sbjct: 1713 -------GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 1765

Query: 352  IQIEGVAAGLWHTICISSDGD-VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
             QI  VA GL HT+ +S+DG  V+AFG   +G+LG G   A++ P+ +D   L  +  K 
Sbjct: 1766 YQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDV--LCGIGIKK 1823

Query: 411  VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            V+CG + +  +  DG V+ +G ++   L  G   + N P Q+  + G +  +VA G  HT
Sbjct: 1824 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHT 1883

Query: 470  LLLA 473
            L LA
Sbjct: 1884 LALA 1887



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 105/200 (52%), Gaps = 6/200 (3%)

Query: 275  YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
            +G  R   L+    N   P      +  + + CG   + VI   G +L  G G YG+ GQ
Sbjct: 1582 WGAGRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQ 1641

Query: 335  GSTDDELSPNCVSSLLGIQIEGVAAGL---WHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
            G++DD      +S+L G  +  +        H++ ++  G+V+++G   +G+LG G    
Sbjct: 1642 GNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDR 1701

Query: 392  ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
            +  PR ++A   E V    +SCG +H+AV+  DGK+F +G   YG+LGLG+  ++ +P +
Sbjct: 1702 QRRPRQIEALQGEEV--VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPER 1759

Query: 452  VT-IEGCVPRNVACGWWHTL 470
            VT +EG     VACG  HTL
Sbjct: 1760 VTALEGYQIGQVACGLNHTL 1779



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 113/393 (28%), Positives = 165/393 (41%), Gaps = 75/393 (19%)

Query: 41   TVGSAWRDVCGGGCGFAMAISD--------SRKLITWGSTDDLGQSYVTSGKHGEIPEPF 92
            +   A + +CG  C F +  +         S   +  G++DDL    V S   G +    
Sbjct: 1605 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVV--- 1661

Query: 93   PLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQS 152
                   +V +     H +A+TE GEV++WG  +       +G L  G   D+    RQ 
Sbjct: 1662 -----TQLVTSCGSDGHSMALTESGEVFSWGDGD-------YGKLGHGNS-DRQRRPRQI 1708

Query: 153  SFLT-EQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDEN 207
              L  E+V   S   + S   +S  DG+    G+G+ G    R+ L          G+ +
Sbjct: 1709 EALQGEEVVQMSCGFKHSAVVTS--DGKLFTFGNGDYG----RLGL----------GNTS 1752

Query: 208  LSAFPCLVTLNPGVRIATVAAGGRHTLALS-DIGQVWGWGYGGEGQLGLGSRIRMVSSPH 266
                P  VT   G +I  VA G  HTLA+S D   VW +G G  G+LGLG+     SSP 
Sbjct: 1753 NKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK-SSPQ 1811

Query: 267  PIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGW 326
             I  +                           G  +K +ACG + S  +T  G + TFG 
Sbjct: 1812 KIDVL--------------------------CGIGIKKVACGTQFSVALTKDGHVYTFGQ 1845

Query: 327  GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
                   +G   +   P  +  L G+ IE VA G  HT+ ++S+GDVYA+G N  GQLG 
Sbjct: 1846 DRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL 1905

Query: 387  GGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            G       P L+     +NV  + +S G  H+A
Sbjct: 1906 GHTNHVREPTLVTGLQGKNV--RQISAGRCHSA 1936


>gi|328873771|gb|EGG22137.1| regulator of chromosome condensation domain-containing protein
           [Dictyostelium fasciculatum]
          Length = 1859

 Score =  125 bits (315), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 119/419 (28%), Positives = 184/419 (43%), Gaps = 63/419 (15%)

Query: 57  AMAISDSRKLITWGSTDDLGQSYVTSGKHGE--IPEPFPLPTEASIVKAAAGWAHCVAVT 114
           A  +   R ++TWGS+ +    + T G+      PE  P      I   + G  +  A+T
Sbjct: 581 ATQLDTQRGIMTWGSSSNCKLGFKTEGREQSQATPERLPNFNIPEICSISCGSYYSAALT 640

Query: 115 EGGEVYTWGWKECVPSGRVFGD-LST-GTG-LDKDVFERQSSFLTEQVSPRSQVSRSSGG 171
           E G+VY WG       G V    LST G G L+  +   +   L+E V        S+  
Sbjct: 641 ENGDVYMWG------RGSVKNPPLSTLGNGSLEDQLLPTKVESLSEVVLVSIGYYHSAAL 694

Query: 172 TSSGTD-GRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGG 230
            S+G     G GE+G                  GD      P +V       +  V  G 
Sbjct: 695 KSNGELLTWGCGEDGQL--------------GHGDVLNQTIPKVVQTMTSHWVTQVQCGE 740

Query: 231 RHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNS 290
           +HT+ L+  G+V+ WG    GQLGLG      +  +  P + +S  K             
Sbjct: 741 KHTICLTKNGKVFTWGTSEYGQLGLGD-----TQKNCTPMLVTSLEK------------- 782

Query: 291 EGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLL 350
                    N ++ IACG  H AV+T+A  +L FG G       GS +    P  V +L 
Sbjct: 783 --------YNIIQ-IACGSTHCAVLTNAREVLVFGNG----AAMGSANIISVPMMVPALK 829

Query: 351 GIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
            + IE ++ G + T  ++  GDVY +G  Q  +LG G +Q+E  P+L+D    +++  + 
Sbjct: 830 HLNIERLSCGHYSTAALTECGDVYTWGSGQ--ELGHGTNQSELHPKLVDGLRSQSI--RQ 885

Query: 411 VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWH 468
           +SCG RH A + D GK++  G + +GQLG     D+N P ++ ++      +V+CG  H
Sbjct: 886 ISCGGRHMAFLTDSGKIYTCGKDPFGQLGHAQG-DQNKPKKIDSLLKTTFISVSCGENH 943



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 80/266 (30%), Positives = 114/266 (42%), Gaps = 45/266 (16%)

Query: 200 SSSSGDENL-SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR 258
           +SSSGD  L S+ P L  +N            R    L     +  WG     +LG  + 
Sbjct: 554 TSSSGDNTLLSSSPQLTGVNSN-------DSSRSATQLDTQRGIMTWGSSSNCKLGFKTE 606

Query: 259 IRMVSSPHP-------IPCIES-SYGKDRSAALS---------RGSVNSEGPGFRVPGN- 300
            R  S   P       IP I S S G   SAAL+         RGSV +  P     GN 
Sbjct: 607 GREQSQATPERLPNFNIPEICSISCGSYYSAALTENGDVYMWGRGSVKN--PPLSTLGNG 664

Query: 301 ---------------YVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNC 345
                           V  ++ G  HSA +   G LLT+G G  GQ G G   ++  P  
Sbjct: 665 SLEDQLLPTKVESLSEVVLVSIGYYHSAALKSNGELLTWGCGEDGQLGHGDVLNQTIPKV 724

Query: 346 VSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLEN 405
           V ++    +  V  G  HTIC++ +G V+ +G +++GQLG G  Q    P L+   SLE 
Sbjct: 725 VQTMTSHWVTQVQCGEKHTICLTKNGKVFTWGTSEYGQLGLGDTQKNCTPMLV--TSLEK 782

Query: 406 VHSKSVSCGARHTAVIADDGKVFCWG 431
            +   ++CG+ H AV+ +  +V  +G
Sbjct: 783 YNIIQIACGSTHCAVLTNAREVLVFG 808


>gi|380788265|gb|AFE66008.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4861

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 84/244 (34%), Positives = 128/244 (52%), Gaps = 31/244 (12%)

Query: 232  HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
            H++AL++ G+V+ WG G  G+LG G+  R    P  I  ++                   
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQ------------------- 4132

Query: 292  GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                   G  V  ++CG +HSAV+T  G L TFG G YG+ G G+T ++  P  V++L G
Sbjct: 4133 -------GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4185

Query: 352  IQIEGVAAGLWHTICISSDGD-VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
             QI  VA GL HT+ +S+DG  V+AFG   +G+LG G   A++ P+ +D   L  +  K 
Sbjct: 4186 YQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDV--LCGIGIKK 4243

Query: 411  VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            V+CG + +  +  DG V+ +G ++   L  G   + N P Q+  + G +  +VA G  HT
Sbjct: 4244 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHT 4303

Query: 470  LLLA 473
            L LA
Sbjct: 4304 LALA 4307



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 105/200 (52%), Gaps = 6/200 (3%)

Query: 275  YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
            +G  R   L+    N   P      +  + + CG   + VI   G +L  G G YG+ GQ
Sbjct: 4002 WGAGRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQ 4061

Query: 335  GSTDDELSPNCVSSLLGIQIEGVAAGL---WHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
            G++DD      +S+L G  +  +        H++ ++  G+V+++G   +G+LG G    
Sbjct: 4062 GNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDR 4121

Query: 392  ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
            +  PR ++A   E V    +SCG +H+AV+  DGK+F +G   YG+LGLG+  ++ +P +
Sbjct: 4122 QRRPRQIEALQGEEV--VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPER 4179

Query: 452  VT-IEGCVPRNVACGWWHTL 470
            VT +EG     VACG  HTL
Sbjct: 4180 VTALEGYQIGQVACGLNHTL 4199



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 113/393 (28%), Positives = 165/393 (41%), Gaps = 75/393 (19%)

Query: 41   TVGSAWRDVCGGGCGFAMAISD--------SRKLITWGSTDDLGQSYVTSGKHGEIPEPF 92
            +   A + +CG  C F +  +         S   +  G++DDL    V S   G +    
Sbjct: 4025 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVV--- 4081

Query: 93   PLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQS 152
                   +V +     H +A+TE GEV++WG  +       +G L  G   D+    RQ 
Sbjct: 4082 -----TQLVTSCGSDGHSMALTESGEVFSWGDGD-------YGKLGHGNS-DRQRRPRQI 4128

Query: 153  SFLT-EQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDEN 207
              L  E+V   S   + S   +S  DG+    G+G+ G    R+ L          G+ +
Sbjct: 4129 EALQGEEVVQMSCGFKHSAVVTS--DGKLFTFGNGDYG----RLGL----------GNTS 4172

Query: 208  LSAFPCLVTLNPGVRIATVAAGGRHTLALS-DIGQVWGWGYGGEGQLGLGSRIRMVSSPH 266
                P  VT   G +I  VA G  HTLA+S D   VW +G G  G+LGLG+     SSP 
Sbjct: 4173 NKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK-SSPQ 4231

Query: 267  PIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGW 326
             I  +                           G  +K +ACG + S  +T  G + TFG 
Sbjct: 4232 KIDVL--------------------------CGIGIKKVACGTQFSVALTKDGHVYTFGQ 4265

Query: 327  GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
                   +G   +   P  +  L G+ IE VA G  HT+ ++S+GDVYA+G N  GQLG 
Sbjct: 4266 DRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL 4325

Query: 387  GGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            G       P L+     +NV  + +S G  H+A
Sbjct: 4326 GHTNHVREPTLVTGLQGKNV--RQISAGRCHSA 4356



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 132/298 (44%), Gaps = 35/298 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAG---GRHTLALSDIGQVWGWGYGGEGQLGLGSRI- 259
           GD N  +    +T  P   I  V++      HTLA +  G+V+ WG G  G+LG G+   
Sbjct: 438 GDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSST 497

Query: 260 ----RMVSSP---HPIPCIESSY---------------GKDRSAALSRGSVNSEG-PGFR 296
               +++  P     + C+ + Y               G+     L  G  NS   P   
Sbjct: 498 QKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557

Query: 297 VPGNYVKGIACGGRHSAVITDAGALL-TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
              + V  ++CG  H+  ++  G  + +FG G  G+ G G T+    P  + +L G+ I 
Sbjct: 558 KDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIR 617

Query: 356 GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL-PRLLDAPSLENVHSKSVSCG 414
            V AG   ++ ++S G VYA+G      LG G  +A  L P+L++   L       VS G
Sbjct: 618 KVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE--ELAATRIVDVSIG 673

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVI-DRNIPSQVT-IEGCVPRNVACGWWHTL 470
             H   ++ D +V+ WG N  GQ G G+       P +V+ ++G   + ++ G  H+L
Sbjct: 674 DSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 95/174 (54%), Gaps = 5/174 (2%)

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
           + I  G   + VI+  G++   G G YG+ G G ++++ +   ++      I+ V++   
Sbjct: 406 QTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKG 465

Query: 363 ---HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
              HT+  +++G+V+++G   +G+LG G    +  P+L+  P L+      VS G RH+A
Sbjct: 466 SDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCVSAGYRHSA 524

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
            + +DG+++ WG   +G+LG GD   RNIP+ V     V   V+CG  HT+ L+
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG-EVSCGSSHTIALS 577



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 112/251 (44%), Gaps = 31/251 (12%)

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
           T+ AG   T  +S  G V   G G  G+LGLG       S +     + ++   RS    
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLG------DSNNQSTLKKLTFEPHRSIKKV 460

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN 344
             S  S+G                  H+   T  G + ++G G YG+ G G++  +  P 
Sbjct: 461 SSSKGSDG------------------HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPK 502

Query: 345 CVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSL 403
            +   L G  +  V+AG  H+  ++ DG++Y +G   FG+LG G   +  +P L+    +
Sbjct: 503 LIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK--DI 560

Query: 404 ENVHSKSVSCGARHTAVIADDGK-VFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRN 461
            NV    VSCG+ HT  ++ DG+ V+ +G    G+LG GD      P  +  ++G   R 
Sbjct: 561 SNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK 618

Query: 462 VACGWWHTLLL 472
           V  G   +L L
Sbjct: 619 VCAGSQSSLAL 629



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 86/324 (26%), Positives = 130/324 (40%), Gaps = 67/324 (20%)

Query: 52  GGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVK-AAAGWA 108
           G  G  +A +   ++ +WG  D   LG    ++ K+   P+    P +  +V   +AG+ 
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY---PKLIQGPLQGKVVVCVSAGYR 521

Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRS 168
           H  AVTE GE+YTWG  +       FG L  G     D   R    L + +S   +VS  
Sbjct: 522 HSAAVTEDGELYTWGEGD-------FGRLGHG-----DSNSRNIPTLVKDISNVGEVSCG 569

Query: 169 SGGTSS-GTDGR-----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVR 222
           S  T +   DGR     G G+ G                  GD N    P ++    G+ 
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKL--------------GHGDTNRVYKPKVIEALQGMF 615

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V AG + +LAL+  GQV+ WG G    LG GS       P  I              
Sbjct: 616 IRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE------------- 660

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                         +    +  ++ G  H   ++    +  +G    GQCGQG++   ++
Sbjct: 661 -------------ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPIT 707

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTI 365
            P  VS L GI I+ ++AG  H++
Sbjct: 708 KPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 45.4 bits (106), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 4/89 (4%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           +S   +VY +G N   QL  G  +    P+L  APS  +  ++++  G   T VI+ DG 
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKL--APSFSD--AQTIEAGQYCTFVISTDGS 423

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
           V   G   YG+LGLGD  +++   ++T E
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFE 452


>gi|355778100|gb|EHH63136.1| hypothetical protein EGM_16043 [Macaca fascicularis]
          Length = 4862

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 84/244 (34%), Positives = 128/244 (52%), Gaps = 31/244 (12%)

Query: 232  HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
            H++AL++ G+V+ WG G  G+LG G+  R    P  I  ++                   
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQ------------------- 4132

Query: 292  GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                   G  V  ++CG +HSAV+T  G L TFG G YG+ G G+T ++  P  V++L G
Sbjct: 4133 -------GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4185

Query: 352  IQIEGVAAGLWHTICISSDGD-VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
             QI  VA GL HT+ +S+DG  V+AFG   +G+LG G   A++ P+ +D   L  +  K 
Sbjct: 4186 YQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDV--LCGIGIKK 4243

Query: 411  VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            V+CG + +  +  DG V+ +G ++   L  G   + N P Q+  + G +  +VA G  HT
Sbjct: 4244 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHT 4303

Query: 470  LLLA 473
            L LA
Sbjct: 4304 LALA 4307



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 105/200 (52%), Gaps = 6/200 (3%)

Query: 275  YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
            +G  R   L+    N   P      +  + + CG   + VI   G +L  G G YG+ GQ
Sbjct: 4002 WGAGRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQ 4061

Query: 335  GSTDDELSPNCVSSLLGIQIEGVAAGL---WHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
            G++DD      +S+L G  +  +        H++ ++  G+V+++G   +G+LG G    
Sbjct: 4062 GNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDR 4121

Query: 392  ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
            +  PR ++A   E V    +SCG +H+AV+  DGK+F +G   YG+LGLG+  ++ +P +
Sbjct: 4122 QRRPRQIEALQGEEV--VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPER 4179

Query: 452  VT-IEGCVPRNVACGWWHTL 470
            VT +EG     VACG  HTL
Sbjct: 4180 VTALEGYQIGQVACGLNHTL 4199



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 165/393 (41%), Gaps = 75/393 (19%)

Query: 41   TVGSAWRDVCGGGCGFAMAISD--------SRKLITWGSTDDLGQSYVTSGKHGEIPEPF 92
            +   A + +CG  C F +  +         S   +  G++DDL    V S   G +    
Sbjct: 4025 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVV--- 4081

Query: 93   PLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQS 152
                   +V +     H +A+TE GEV++WG  +       +G L  G   D+    RQ 
Sbjct: 4082 -----TQLVTSCGSDGHSMALTESGEVFSWGDGD-------YGKLGHGNS-DRQRRPRQI 4128

Query: 153  SFLT-EQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDEN 207
              L  E+V   S   + S   +S  DG+    G+G+ G    R+ L          G+ +
Sbjct: 4129 EALQGEEVVQMSCGFKHSAVVTS--DGKLFTFGNGDYG----RLGL----------GNTS 4172

Query: 208  LSAFPCLVTLNPGVRIATVAAGGRHTLALS-DIGQVWGWGYGGEGQLGLGSRIRMVSSPH 266
                P  VT   G +I  VA G  HTLA+S D   VW +G G  G+LGLG+     SSP 
Sbjct: 4173 NKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK-SSPQ 4231

Query: 267  PIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGW 326
             I  +                           G  +K +ACG + S  +T  G + TFG 
Sbjct: 4232 KIDVL--------------------------CGIGIKKVACGTQFSVALTKDGHVYTFGQ 4265

Query: 327  GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
                   +G   +   P  +  L G+ IE VA G  HT+ ++S+GDVYA+G N  GQLG 
Sbjct: 4266 DRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL 4325

Query: 387  GGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            G       P L+     +N+  + +S G  H+A
Sbjct: 4326 GHTNHVREPTLVTGLQGKNI--RQISAGRCHSA 4356



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 132/298 (44%), Gaps = 35/298 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAG---GRHTLALSDIGQVWGWGYGGEGQLGLGSRI- 259
           GD N  +    +T  P   I  V++      HTLA +  G+V+ WG G  G+LG G+   
Sbjct: 438 GDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSST 497

Query: 260 ----RMVSSP---HPIPCIESSY---------------GKDRSAALSRGSVNSEG-PGFR 296
               +++  P     + C+ + Y               G+     L  G  NS   P   
Sbjct: 498 QKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557

Query: 297 VPGNYVKGIACGGRHSAVITDAGALL-TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
              + V  ++CG  H+  ++  G  + +FG G  G+ G G T+    P  + +L G+ I 
Sbjct: 558 KDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIR 617

Query: 356 GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL-PRLLDAPSLENVHSKSVSCG 414
            V AG   ++ ++S G VYA+G      LG G  +A  L P+L++   L       VS G
Sbjct: 618 KVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE--ELAATRIVDVSIG 673

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVI-DRNIPSQVT-IEGCVPRNVACGWWHTL 470
             H   ++ D +V+ WG N  GQ G G+       P +V+ ++G   + ++ G  H+L
Sbjct: 674 DSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 95/174 (54%), Gaps = 5/174 (2%)

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
           + I  G   + VI+  G++   G G YG+ G G ++++ +   ++      I+ V++   
Sbjct: 406 QTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKG 465

Query: 363 ---HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
              HT+  +++G+V+++G   +G+LG G    +  P+L+  P L+      VS G RH+A
Sbjct: 466 SDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCVSAGYRHSA 524

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
            + +DG+++ WG   +G+LG GD   RNIP+ V     V   V+CG  HT+ L+
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG-EVSCGSSHTIALS 577



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 112/251 (44%), Gaps = 31/251 (12%)

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
           T+ AG   T  +S  G V   G G  G+LGLG       S +     + ++   RS    
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLG------DSNNQSTLKKLTFEPHRSIKKV 460

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN 344
             S  S+G                  H+   T  G + ++G G YG+ G G++  +  P 
Sbjct: 461 SSSKGSDG------------------HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPK 502

Query: 345 CVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSL 403
            +   L G  +  V+AG  H+  ++ DG++Y +G   FG+LG G   +  +P L+    +
Sbjct: 503 LIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK--DI 560

Query: 404 ENVHSKSVSCGARHTAVIADDGK-VFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRN 461
            NV    VSCG+ HT  ++ DG+ V+ +G    G+LG GD      P  +  ++G   R 
Sbjct: 561 SNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK 618

Query: 462 VACGWWHTLLL 472
           V  G   +L L
Sbjct: 619 VCAGSQSSLAL 629



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 86/324 (26%), Positives = 130/324 (40%), Gaps = 67/324 (20%)

Query: 52  GGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVK-AAAGWA 108
           G  G  +A +   ++ +WG  D   LG    ++ K+   P+    P +  +V   +AG+ 
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY---PKLIQGPLQGKVVVCVSAGYR 521

Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRS 168
           H  AVTE GE+YTWG  +       FG L  G     D   R    L + +S   +VS  
Sbjct: 522 HSAAVTEDGELYTWGEGD-------FGRLGHG-----DSNSRNIPTLVKDISNVGEVSCG 569

Query: 169 SGGTSS-GTDGR-----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVR 222
           S  T +   DGR     G G+ G                  GD N    P ++    G+ 
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKL--------------GHGDTNRVYKPKVIEALQGMF 615

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V AG + +LAL+  GQV+ WG G    LG GS       P  I              
Sbjct: 616 IRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE------------- 660

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                         +    +  ++ G  H   ++    +  +G    GQCGQG++   ++
Sbjct: 661 -------------ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPIT 707

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTI 365
            P  VS L GI I+ ++AG  H++
Sbjct: 708 KPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 45.4 bits (106), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 4/89 (4%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           +S   +VY +G N   QL  G  +    P+L  APS  +  ++++  G   T VI+ DG 
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKL--APSFSD--AQTIEAGQYCTFVISTDGS 423

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
           V   G   YG+LGLGD  +++   ++T E
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFE 452


>gi|355692784|gb|EHH27387.1| hypothetical protein EGK_17574 [Macaca mulatta]
          Length = 4862

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 84/244 (34%), Positives = 128/244 (52%), Gaps = 31/244 (12%)

Query: 232  HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
            H++AL++ G+V+ WG G  G+LG G+  R    P  I  ++                   
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQ------------------- 4132

Query: 292  GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                   G  V  ++CG +HSAV+T  G L TFG G YG+ G G+T ++  P  V++L G
Sbjct: 4133 -------GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4185

Query: 352  IQIEGVAAGLWHTICISSDGD-VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
             QI  VA GL HT+ +S+DG  V+AFG   +G+LG G   A++ P+ +D   L  +  K 
Sbjct: 4186 YQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDV--LCGIGIKK 4243

Query: 411  VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            V+CG + +  +  DG V+ +G ++   L  G   + N P Q+  + G +  +VA G  HT
Sbjct: 4244 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHT 4303

Query: 470  LLLA 473
            L LA
Sbjct: 4304 LALA 4307



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 105/200 (52%), Gaps = 6/200 (3%)

Query: 275  YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
            +G  R   L+    N   P      +  + + CG   + VI   G +L  G G YG+ GQ
Sbjct: 4002 WGAGRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQ 4061

Query: 335  GSTDDELSPNCVSSLLGIQIEGVAAGL---WHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
            G++DD      +S+L G  +  +        H++ ++  G+V+++G   +G+LG G    
Sbjct: 4062 GNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDR 4121

Query: 392  ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
            +  PR ++A   E V    +SCG +H+AV+  DGK+F +G   YG+LGLG+  ++ +P +
Sbjct: 4122 QRRPRQIEALQGEEV--VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPER 4179

Query: 452  VT-IEGCVPRNVACGWWHTL 470
            VT +EG     VACG  HTL
Sbjct: 4180 VTALEGYQIGQVACGLNHTL 4199



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 165/393 (41%), Gaps = 75/393 (19%)

Query: 41   TVGSAWRDVCGGGCGFAMAISD--------SRKLITWGSTDDLGQSYVTSGKHGEIPEPF 92
            +   A + +CG  C F +  +         S   +  G++DDL    V S   G +    
Sbjct: 4025 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVV--- 4081

Query: 93   PLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQS 152
                   +V +     H +A+TE GEV++WG  +       +G L  G   D+    RQ 
Sbjct: 4082 -----TQLVTSCGSDGHSMALTESGEVFSWGDGD-------YGKLGHGNS-DRQRRPRQI 4128

Query: 153  SFLT-EQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDEN 207
              L  E+V   S   + S   +S  DG+    G+G+ G    R+ L          G+ +
Sbjct: 4129 EALQGEEVVQMSCGFKHSAVVTS--DGKLFTFGNGDYG----RLGL----------GNTS 4172

Query: 208  LSAFPCLVTLNPGVRIATVAAGGRHTLALS-DIGQVWGWGYGGEGQLGLGSRIRMVSSPH 266
                P  VT   G +I  VA G  HTLA+S D   VW +G G  G+LGLG+     SSP 
Sbjct: 4173 NKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK-SSPQ 4231

Query: 267  PIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGW 326
             I  +                           G  +K +ACG + S  +T  G + TFG 
Sbjct: 4232 KIDVL--------------------------CGIGIKKVACGTQFSVALTKDGHVYTFGQ 4265

Query: 327  GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
                   +G   +   P  +  L G+ IE VA G  HT+ ++S+GDVYA+G N  GQLG 
Sbjct: 4266 DRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL 4325

Query: 387  GGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            G       P L+     +N+  + +S G  H+A
Sbjct: 4326 GHTNHVREPTLVTGLQGKNI--RQISAGRCHSA 4356



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 95/174 (54%), Gaps = 5/174 (2%)

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
           + I  G   + VI+  G++   G G YG+ G G ++++ +   ++      I+ V++   
Sbjct: 406 QTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKG 465

Query: 363 ---HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
              HT+  +++G+V+++G   +G+LG G    +  P+L+  P L+      VS G RH+A
Sbjct: 466 SDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCVSAGYRHSA 524

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
            + +DG+++ WG   +G+LG GD   RNIP+ V     V   V+CG  HT+ L+
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG-EVSCGSSHTIALS 577



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 132/298 (44%), Gaps = 35/298 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAG---GRHTLALSDIGQVWGWGYGGEGQLGLGSRI- 259
           GD N  +    +T  P   I  V++      HTLA +  G+V+ WG G  G+LG G+   
Sbjct: 438 GDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSST 497

Query: 260 ----RMVSSP---HPIPCIESSY---------------GKDRSAALSRGSVNSEG-PGFR 296
               +++  P     + C+ + Y               G+     L  G  NS   P   
Sbjct: 498 QKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557

Query: 297 VPGNYVKGIACGGRHSAVITDAGALL-TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
              + V  ++CG  H+  ++  G  + +FG G  G+ G G T+    P  + +L G+ I 
Sbjct: 558 KDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIR 617

Query: 356 GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL-PRLLDAPSLENVHSKSVSCG 414
            V AG   ++ ++S G VYA+G      LG G  +A  L P+L++   L       VS G
Sbjct: 618 KVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE--ELAATRIVDVSIG 673

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVI-DRNIPSQVT-IEGCVPRNVACGWWHTL 470
             H   ++ D +V+ WG N  GQ G G+       P +V+ ++G   + ++ G  H+L
Sbjct: 674 DSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 112/251 (44%), Gaps = 31/251 (12%)

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
           T+ AG   T  +S  G V   G G  G+LGLG       S +     + ++   RS    
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLG------DSNNQSTLKKLTFEPHRSIKKV 460

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN 344
             S  S+G                  H+   T  G + ++G G YG+ G G++  +  P 
Sbjct: 461 SSSKGSDG------------------HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPK 502

Query: 345 CVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSL 403
            +   L G  +  V+AG  H+  ++ DG++Y +G   FG+LG G   +  +P L+    +
Sbjct: 503 LIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK--DI 560

Query: 404 ENVHSKSVSCGARHTAVIADDGK-VFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRN 461
            NV    VSCG+ HT  ++ DG+ V+ +G    G+LG GD      P  +  ++G   R 
Sbjct: 561 SNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK 618

Query: 462 VACGWWHTLLL 472
           V  G   +L L
Sbjct: 619 VCAGSQSSLAL 629



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 86/324 (26%), Positives = 130/324 (40%), Gaps = 67/324 (20%)

Query: 52  GGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVK-AAAGWA 108
           G  G  +A +   ++ +WG  D   LG    ++ K+   P+    P +  +V   +AG+ 
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY---PKLIQGPLQGKVVVCVSAGYR 521

Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRS 168
           H  AVTE GE+YTWG  +       FG L  G     D   R    L + +S   +VS  
Sbjct: 522 HSAAVTEDGELYTWGEGD-------FGRLGHG-----DSNSRNIPTLVKDISNVGEVSCG 569

Query: 169 SGGTSS-GTDGR-----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVR 222
           S  T +   DGR     G G+ G                  GD N    P ++    G+ 
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKL--------------GHGDTNRVYKPKVIEALQGMF 615

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V AG + +LAL+  GQV+ WG G    LG GS       P  I              
Sbjct: 616 IRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE------------- 660

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                         +    +  ++ G  H   ++    +  +G    GQCGQG++   ++
Sbjct: 661 -------------ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPIT 707

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTI 365
            P  VS L GI I+ ++AG  H++
Sbjct: 708 KPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 45.4 bits (106), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 4/89 (4%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           +S   +VY +G N   QL  G  +    P+L  APS  +  ++++  G   T VI+ DG 
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKL--APSFSD--AQTIEAGQYCTFVISTDGS 423

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
           V   G   YG+LGLGD  +++   ++T E
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFE 452


>gi|395502621|ref|XP_003755677.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sarcophilus
            harrisii]
          Length = 4865

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 85/244 (34%), Positives = 128/244 (52%), Gaps = 31/244 (12%)

Query: 232  HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
            H++AL++ G+V+ WG G  G+LG G+  R    P  I  ++                   
Sbjct: 4097 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQ------------------- 4136

Query: 292  GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                   G  V  ++CG +HSAV+T  G L TFG G YG+ G G+T ++  P  V++L G
Sbjct: 4137 -------GEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4189

Query: 352  IQIEGVAAGLWHTICISSDGD-VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
             QI  VA GL HT+ +S+DG  V+AFG   +G+LG G   A++ P+ +D   L  +  K 
Sbjct: 4190 YQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDV--LCGIGIKK 4247

Query: 411  VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            V+CG + +  +  DG V+ +G ++   L  G   + N P Q+  + G V  +VA G  HT
Sbjct: 4248 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHT 4307

Query: 470  LLLA 473
            L LA
Sbjct: 4308 LALA 4311



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 105/200 (52%), Gaps = 6/200 (3%)

Query: 275  YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
            +G  R   L+    N   P      +  + + CG   + VI   G +L  G G YG+ GQ
Sbjct: 4006 WGAGRHGQLAEAGRNVMIPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQ 4065

Query: 335  GSTDDELSPNCVSSLLGIQIEGVAAGL---WHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
            G++DD      +S+L G  +  +        H++ ++  G+V+++G   +G+LG G    
Sbjct: 4066 GNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDR 4125

Query: 392  ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
            +  PR ++A   E V    +SCG +H+AV+  DGK+F +G   YG+LGLG+  ++ +P +
Sbjct: 4126 QRRPRQIEALQGEEV--IQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPER 4183

Query: 452  VT-IEGCVPRNVACGWWHTL 470
            VT +EG     VACG  HTL
Sbjct: 4184 VTALEGYQIGQVACGLNHTL 4203



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 111/393 (28%), Positives = 164/393 (41%), Gaps = 75/393 (19%)

Query: 41   TVGSAWRDVCGGGCGFAMAISD--------SRKLITWGSTDDLGQSYVTSGKHGEIPEPF 92
            +   A + +CG  C F +  +         S   +  G++DDL    V S   G +    
Sbjct: 4029 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVV--- 4085

Query: 93   PLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQS 152
                   +V +     H +A+TE GEV++WG  +       +G L  G   D+    RQ 
Sbjct: 4086 -----TQLVTSCGSDGHSMALTESGEVFSWGDGD-------YGKLGHGNS-DRQRRPRQI 4132

Query: 153  SFLT-EQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDEN 207
              L  E+V   S   + S   +S  DG+    G+G+ G    R+ L          G+ +
Sbjct: 4133 EALQGEEVIQMSCGFKHSAVVTS--DGKLFTFGNGDYG----RLGL----------GNTS 4176

Query: 208  LSAFPCLVTLNPGVRIATVAAGGRHTLALS-DIGQVWGWGYGGEGQLGLGSRIRMVSSPH 266
                P  VT   G +I  VA G  HTLA+S D   VW +G G  G+LGLG+     SSP 
Sbjct: 4177 NKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK-SSPQ 4235

Query: 267  PIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGW 326
             +  +                           G  +K +ACG + S  +T  G + TFG 
Sbjct: 4236 KVDVL--------------------------CGIGIKKVACGTQFSVALTKDGHVYTFGQ 4269

Query: 327  GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
                   +G   +   P  +  L G+ IE VA G  HT+ ++S GDVYA+G N  GQLG 
Sbjct: 4270 DRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL 4329

Query: 387  GGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            G       P L+     +N+  + +S G  H+A
Sbjct: 4330 GHTNHVREPTLITVLQGKNI--RQISAGRCHSA 4360



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 96/174 (55%), Gaps = 5/174 (2%)

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
           + I  G   + VI+  G++   G G YG+ G G ++++ +   ++      I+ V++   
Sbjct: 406 QTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKG 465

Query: 363 ---HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
              HT+  +++G+V+++G   +G+LG G    +  P+L+  P L+      VS G RH+A
Sbjct: 466 SDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCVSAGYRHSA 524

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
            +++DG+++ WG   +G+LG GD   RNIP+ V     V   V+CG  HT+ L+
Sbjct: 525 AVSEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG-EVSCGSSHTIALS 577



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 77/273 (28%), Positives = 127/273 (46%), Gaps = 40/273 (14%)

Query: 204 GDENLSAFPCLVTLNP--GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           G+ +   +P L+   P  G  +  V+AG RH+ A+S+ G+++ WG G  G+LG G     
Sbjct: 493 GNSSTQKYPKLIQ-GPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEGDFGRLGHGD---- 547

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
            S+   IP +     KD S                     V  ++CG  H+  ++  G  
Sbjct: 548 -SNSRNIPTL----VKDISN--------------------VGEVSCGSSHTIALSKDGRT 582

Query: 322 L-TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
           + +FG G  G+ G G T+    P  + +L G+ I  V AG   ++ ++S G VYA+G   
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 381 FGQLGTGGDQAETL-PRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG 439
              LG G  +A  L P+L++   L       +S G  H   ++ D +V+ WG N  GQ G
Sbjct: 642 -ACLGCGSSEATALRPKLIE--ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 440 LGDVI-DRNIPSQVT-IEGCVPRNVACGWWHTL 470
            G+       P +V+ ++G   + ++ G  H+L
Sbjct: 699 QGNSTGPITKPKKVSGLDGVAIQQISAGTSHSL 731



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 112/251 (44%), Gaps = 31/251 (12%)

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
           T+ AG   T  +S  G V   G G  G+LGLG       S +     + ++   RS    
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLG------DSNNQSTLKKLTFEPHRSIKKV 460

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN 344
             S  S+G                  H+   T  G + ++G G YG+ G G++  +  P 
Sbjct: 461 SSSKGSDG------------------HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPK 502

Query: 345 CVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSL 403
            +   L G  +  V+AG  H+  +S DG++Y +G   FG+LG G   +  +P L+    +
Sbjct: 503 LIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK--DI 560

Query: 404 ENVHSKSVSCGARHTAVIADDGK-VFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRN 461
            NV    VSCG+ HT  ++ DG+ V+ +G    G+LG GD      P  +  ++G   R 
Sbjct: 561 SNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK 618

Query: 462 VACGWWHTLLL 472
           V  G   +L L
Sbjct: 619 VCAGSQSSLAL 629



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 85/324 (26%), Positives = 130/324 (40%), Gaps = 67/324 (20%)

Query: 52  GGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVK-AAAGWA 108
           G  G  +A +   ++ +WG  D   LG    ++ K+   P+    P +  +V   +AG+ 
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY---PKLIQGPLQGKVVVCVSAGYR 521

Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRS 168
           H  AV+E GE+YTWG  +       FG L  G     D   R    L + +S   +VS  
Sbjct: 522 HSAAVSEDGELYTWGEGD-------FGRLGHG-----DSNSRNIPTLVKDISNVGEVSCG 569

Query: 169 SGGTSS-GTDGR-----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVR 222
           S  T +   DGR     G G+ G                  GD N    P ++    G+ 
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKL--------------GHGDTNRVYKPKVIEALQGMF 615

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V AG + +LAL+  GQV+ WG G    LG GS       P  I              
Sbjct: 616 IRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE------------- 660

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                         +    +  I+ G  H   ++    +  +G    GQCGQG++   ++
Sbjct: 661 -------------ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPIT 707

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTI 365
            P  VS L G+ I+ ++AG  H++
Sbjct: 708 KPKKVSGLDGVAIQQISAGTSHSL 731



 Score = 45.4 bits (106), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 4/89 (4%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           +S   +VY +G N   QL  G  +    P+L  APS  +  ++++  G   T VI+ DG 
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKL--APSFSD--AQTIEAGQYCTFVISTDGS 423

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
           V   G   YG+LGLGD  +++   ++T E
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFE 452


>gi|297696825|ref|XP_002825580.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1 [Pongo abelii]
          Length = 4864

 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 84/244 (34%), Positives = 128/244 (52%), Gaps = 31/244 (12%)

Query: 232  HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
            H++AL++ G+V+ WG G  G+LG G+  R    P  I  ++                   
Sbjct: 4096 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQ------------------- 4135

Query: 292  GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                   G  V  ++CG +HSAV+T  G L TFG G YG+ G G+T ++  P  V++L G
Sbjct: 4136 -------GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4188

Query: 352  IQIEGVAAGLWHTICISSDGD-VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
             QI  VA GL HT+ +S+DG  V+AFG   +G+LG G   A++ P+ +D   L  +  K 
Sbjct: 4189 YQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDV--LCGIGIKK 4246

Query: 411  VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            V+CG + +  +  DG V+ +G ++   L  G   + N P Q+  + G +  +VA G  HT
Sbjct: 4247 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPLLAGVIIEDVAVGAEHT 4306

Query: 470  LLLA 473
            L LA
Sbjct: 4307 LALA 4310



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 105/200 (52%), Gaps = 6/200 (3%)

Query: 275  YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
            +G  R   L+    N   P      +  + + CG   + VI   G +L  G G YG+ GQ
Sbjct: 4005 WGAGRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQ 4064

Query: 335  GSTDDELSPNCVSSLLGIQIEGVAAGL---WHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
            G++DD      +S+L G  +  +        H++ ++  G+V+++G   +G+LG G    
Sbjct: 4065 GNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDR 4124

Query: 392  ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
            +  PR ++A   E V    +SCG +H+AV+  DGK+F +G   YG+LGLG+  ++ +P +
Sbjct: 4125 QRRPRQIEALQGEEV--VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPER 4182

Query: 452  VT-IEGCVPRNVACGWWHTL 470
            VT +EG     VACG  HTL
Sbjct: 4183 VTALEGYQIGQVACGLNHTL 4202



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 113/393 (28%), Positives = 165/393 (41%), Gaps = 75/393 (19%)

Query: 41   TVGSAWRDVCGGGCGFAMAISD--------SRKLITWGSTDDLGQSYVTSGKHGEIPEPF 92
            +   A + +CG  C F +  +         S   +  G++DDL    V S   G +    
Sbjct: 4028 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVV--- 4084

Query: 93   PLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQS 152
                   +V +     H +A+TE GEV++WG  +       +G L  G   D+    RQ 
Sbjct: 4085 -----TQLVTSCGSDGHSMALTESGEVFSWGDGD-------YGKLGHGNS-DRQRRPRQI 4131

Query: 153  SFLT-EQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDEN 207
              L  E+V   S   + S   +S  DG+    G+G+ G    R+ L          G+ +
Sbjct: 4132 EALQGEEVVQMSCGFKHSAVVTS--DGKLFTFGNGDYG----RLGL----------GNTS 4175

Query: 208  LSAFPCLVTLNPGVRIATVAAGGRHTLALS-DIGQVWGWGYGGEGQLGLGSRIRMVSSPH 266
                P  VT   G +I  VA G  HTLA+S D   VW +G G  G+LGLG+     SSP 
Sbjct: 4176 NKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK-SSPQ 4234

Query: 267  PIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGW 326
             I  +                           G  +K +ACG + S  +T  G + TFG 
Sbjct: 4235 KIDVL--------------------------CGIGIKKVACGTQFSVALTKDGHVYTFGQ 4268

Query: 327  GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
                   +G   +   P  +  L G+ IE VA G  HT+ ++S+GDVYA+G N  GQLG 
Sbjct: 4269 DRLIGLPEGRARNHNRPQQIPLLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL 4328

Query: 387  GGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            G       P L+     +NV  + +S G  H+A
Sbjct: 4329 GHTNHVREPTLVTGLQGKNV--RQISAGRCHSA 4359



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 132/298 (44%), Gaps = 35/298 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAG---GRHTLALSDIGQVWGWGYGGEGQLGLGSRI- 259
           GD N  +    +T  P   I  V++      HTLA +  G+V+ WG G  G+LG G+   
Sbjct: 438 GDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSST 497

Query: 260 ----RMVSSP---HPIPCIESSY---------------GKDRSAALSRGSVNSEG-PGFR 296
               +++  P     + C+ + Y               G+     L  G  NS   P   
Sbjct: 498 QKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557

Query: 297 VPGNYVKGIACGGRHSAVITDAGALL-TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
              + V  ++CG  H+  ++  G  + +FG G  G+ G G T+    P  + +L G+ I 
Sbjct: 558 KDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIR 617

Query: 356 GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL-PRLLDAPSLENVHSKSVSCG 414
            V AG   ++ ++S G VYA+G      LG G  +A  L P+L++   L       VS G
Sbjct: 618 KVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE--ELAATRIVDVSIG 673

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVI-DRNIPSQVT-IEGCVPRNVACGWWHTL 470
             H   ++ D +V+ WG N  GQ G G+       P +V+ ++G   + ++ G  H+L
Sbjct: 674 DSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 95/174 (54%), Gaps = 5/174 (2%)

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
           + I  G   + VI+  G++   G G YG+ G G ++++ +   ++      I+ V++   
Sbjct: 406 QTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKG 465

Query: 363 ---HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
              HT+  +++G+V+++G   +G+LG G    +  P+L+  P L+      VS G RH+A
Sbjct: 466 SDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCVSAGYRHSA 524

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
            + +DG+++ WG   +G+LG GD   RNIP+ V     V   V+CG  HT+ L+
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG-EVSCGSSHTIALS 577



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 112/251 (44%), Gaps = 31/251 (12%)

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
           T+ AG   T  +S  G V   G G  G+LGLG       S +     + ++   RS    
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLG------DSNNQSTLKKLTFEPHRSIKKV 460

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN 344
             S  S+G                  H+   T  G + ++G G YG+ G G++  +  P 
Sbjct: 461 SSSKGSDG------------------HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPK 502

Query: 345 CVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSL 403
            +   L G  +  V+AG  H+  ++ DG++Y +G   FG+LG G   +  +P L+    +
Sbjct: 503 LIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK--DI 560

Query: 404 ENVHSKSVSCGARHTAVIADDGK-VFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRN 461
            NV    VSCG+ HT  ++ DG+ V+ +G    G+LG GD      P  +  ++G   R 
Sbjct: 561 SNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK 618

Query: 462 VACGWWHTLLL 472
           V  G   +L L
Sbjct: 619 VCAGSQSSLAL 629



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 86/324 (26%), Positives = 130/324 (40%), Gaps = 67/324 (20%)

Query: 52  GGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVK-AAAGWA 108
           G  G  +A +   ++ +WG  D   LG    ++ K+   P+    P +  +V   +AG+ 
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY---PKLIQGPLQGKVVVCVSAGYR 521

Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRS 168
           H  AVTE GE+YTWG  +       FG L  G     D   R    L + +S   +VS  
Sbjct: 522 HSAAVTEDGELYTWGEGD-------FGRLGHG-----DSNSRNIPTLVKDISNVGEVSCG 569

Query: 169 SGGTSS-GTDGR-----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVR 222
           S  T +   DGR     G G+ G                  GD N    P ++    G+ 
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKL--------------GHGDTNRVYKPKVIEALQGMF 615

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V AG + +LAL+  GQV+ WG G    LG GS       P  I              
Sbjct: 616 IRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE------------- 660

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                         +    +  ++ G  H   ++    +  +G    GQCGQG++   ++
Sbjct: 661 -------------ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPIT 707

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTI 365
            P  VS L GI I+ ++AG  H++
Sbjct: 708 KPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 45.4 bits (106), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 4/89 (4%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           +S   +VY +G N   QL  G  +    P+L  APS  +  ++++  G   T VI+ DG 
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKL--APSFSD--AQTIEAGQYCTFVISTDGS 423

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
           V   G   YG+LGLGD  +++   ++T E
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFE 452


>gi|402874534|ref|XP_003901090.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Papio
            anubis]
          Length = 3314

 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 84/244 (34%), Positives = 128/244 (52%), Gaps = 31/244 (12%)

Query: 232  HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
            H++AL++ G+V+ WG G  G+LG G+  R    P  I  ++                   
Sbjct: 2546 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQ------------------- 2585

Query: 292  GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                   G  V  ++CG +HSAV+T  G L TFG G YG+ G G+T ++  P  V++L G
Sbjct: 2586 -------GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 2638

Query: 352  IQIEGVAAGLWHTICISSDGD-VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
             QI  VA GL HT+ +S+DG  V+AFG   +G+LG G   A++ P+ +D   L  +  K 
Sbjct: 2639 YQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDV--LCGIGIKK 2696

Query: 411  VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            V+CG + +  +  DG V+ +G ++   L  G   + N P Q+  + G +  +VA G  HT
Sbjct: 2697 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHT 2756

Query: 470  LLLA 473
            L LA
Sbjct: 2757 LALA 2760



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 105/200 (52%), Gaps = 6/200 (3%)

Query: 275  YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
            +G  R   L+    N   P      +  + + CG   + VI   G +L  G G YG+ GQ
Sbjct: 2455 WGAGRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQ 2514

Query: 335  GSTDDELSPNCVSSLLGIQIEGVAAGL---WHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
            G++DD      +S+L G  +  +        H++ ++  G+V+++G   +G+LG G    
Sbjct: 2515 GNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDR 2574

Query: 392  ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
            +  PR ++A   E V    +SCG +H+AV+  DGK+F +G   YG+LGLG+  ++ +P +
Sbjct: 2575 QRRPRQIEALQGEEV--VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPER 2632

Query: 452  VT-IEGCVPRNVACGWWHTL 470
            VT +EG     VACG  HTL
Sbjct: 2633 VTALEGYQIGQVACGLNHTL 2652



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 113/393 (28%), Positives = 165/393 (41%), Gaps = 75/393 (19%)

Query: 41   TVGSAWRDVCGGGCGFAMAISD--------SRKLITWGSTDDLGQSYVTSGKHGEIPEPF 92
            +   A + +CG  C F +  +         S   +  G++DDL    V S   G +    
Sbjct: 2478 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVV--- 2534

Query: 93   PLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQS 152
                   +V +     H +A+TE GEV++WG  +       +G L  G   D+    RQ 
Sbjct: 2535 -----TQLVTSCGSDGHSMALTESGEVFSWGDGD-------YGKLGHGNS-DRQRRPRQI 2581

Query: 153  SFLT-EQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDEN 207
              L  E+V   S   + S   +S  DG+    G+G+ G    R+ L          G+ +
Sbjct: 2582 EALQGEEVVQMSCGFKHSAVVTS--DGKLFTFGNGDYG----RLGL----------GNTS 2625

Query: 208  LSAFPCLVTLNPGVRIATVAAGGRHTLALS-DIGQVWGWGYGGEGQLGLGSRIRMVSSPH 266
                P  VT   G +I  VA G  HTLA+S D   VW +G G  G+LGLG+     SSP 
Sbjct: 2626 NKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK-SSPQ 2684

Query: 267  PIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGW 326
             I  +                           G  +K +ACG + S  +T  G + TFG 
Sbjct: 2685 KIDVL--------------------------CGIGIKKVACGTQFSVALTKDGHVYTFGQ 2718

Query: 327  GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
                   +G   +   P  +  L G+ IE VA G  HT+ ++S+GDVYA+G N  GQLG 
Sbjct: 2719 DRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL 2778

Query: 387  GGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            G       P L+     +NV  + +S G  H+A
Sbjct: 2779 GHTNHVREPTLVTGLQGKNV--RQISAGRCHSA 2809


>gi|403298208|ref|XP_003939923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Saimiri
            boliviensis boliviensis]
          Length = 4860

 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 84/244 (34%), Positives = 128/244 (52%), Gaps = 31/244 (12%)

Query: 232  HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
            H++AL++ G+V+ WG G  G+LG G+  R    P  I  ++                   
Sbjct: 4092 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQ------------------- 4131

Query: 292  GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                   G  V  ++CG +HSAV+T  G L TFG G YG+ G G+T ++  P  V++L G
Sbjct: 4132 -------GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4184

Query: 352  IQIEGVAAGLWHTICISSDGD-VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
             QI  VA GL HT+ +S+DG  V+AFG   +G+LG G   A++ P+ +D   L  +  K 
Sbjct: 4185 YQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNSTAKSSPQKVDV--LCGIGIKK 4242

Query: 411  VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            V+CG + +  +  DG V+ +G ++   L  G   + N P Q+  + G +  +VA G  HT
Sbjct: 4243 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHT 4302

Query: 470  LLLA 473
            L LA
Sbjct: 4303 LALA 4306



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 105/200 (52%), Gaps = 6/200 (3%)

Query: 275  YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
            +G  R   L+    N   P      +  + + CG   + VI   G +L  G G YG+ GQ
Sbjct: 4001 WGAGRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQ 4060

Query: 335  GSTDDELSPNCVSSLLGIQIEGVAAGL---WHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
            G++DD      +S+L G  +  +        H++ ++  G+V+++G   +G+LG G    
Sbjct: 4061 GNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDR 4120

Query: 392  ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
            +  PR ++A   E V    +SCG +H+AV+  DGK+F +G   YG+LGLG+  ++ +P +
Sbjct: 4121 QRRPRQIEALQGEEV--VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPER 4178

Query: 452  VT-IEGCVPRNVACGWWHTL 470
            VT +EG     VACG  HTL
Sbjct: 4179 VTALEGYQIGQVACGLNHTL 4198



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 165/393 (41%), Gaps = 75/393 (19%)

Query: 41   TVGSAWRDVCGGGCGFAMAISD--------SRKLITWGSTDDLGQSYVTSGKHGEIPEPF 92
            +   A + +CG  C F +  +         S   +  G++DDL    V S   G +    
Sbjct: 4024 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVV--- 4080

Query: 93   PLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQS 152
                   +V +     H +A+TE GEV++WG  +       +G L  G   D+    RQ 
Sbjct: 4081 -----TQLVTSCGSDGHSMALTESGEVFSWGDGD-------YGKLGHGNS-DRQRRPRQI 4127

Query: 153  SFLT-EQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDEN 207
              L  E+V   S   + S   +S  DG+    G+G+ G    R+ L          G+ +
Sbjct: 4128 EALQGEEVVQMSCGFKHSAVVTS--DGKLFTFGNGDYG----RLGL----------GNTS 4171

Query: 208  LSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQV-WGWGYGGEGQLGLGSRIRMVSSPH 266
                P  VT   G +I  VA G  HTLA+S  G V W +G G  G+LGLG+     SSP 
Sbjct: 4172 NKKLPERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNSTAK-SSPQ 4230

Query: 267  PIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGW 326
             +  +                           G  +K +ACG + S  +T  G + TFG 
Sbjct: 4231 KVDVL--------------------------CGIGIKKVACGTQFSVALTKDGHVYTFGQ 4264

Query: 327  GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
                   +G   +   P  +  L G+ IE VA G  HT+ ++S+GDVYA+G N  GQLG 
Sbjct: 4265 DRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL 4324

Query: 387  GGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            G       P L+     +NV  + +S G  H+A
Sbjct: 4325 GHTNHVREPTLVTGLQGKNV--RQISAGRCHSA 4355



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 132/298 (44%), Gaps = 35/298 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAG---GRHTLALSDIGQVWGWGYGGEGQLGLGSRI- 259
           GD N  +    +T  P   I  V++      HTLA +  G+V+ WG G  G+LG G+   
Sbjct: 438 GDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSST 497

Query: 260 ----RMVSSP---HPIPCIESSY---------------GKDRSAALSRGSVNSEG-PGFR 296
               +++  P     + C+ + Y               G+     L  G  NS   P   
Sbjct: 498 QKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557

Query: 297 VPGNYVKGIACGGRHSAVITDAGALL-TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
              + V  ++CG  H+  ++  G  + +FG G  G+ G G T+    P  + +L G+ I 
Sbjct: 558 KDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIR 617

Query: 356 GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL-PRLLDAPSLENVHSKSVSCG 414
            V AG   ++ ++S G VYA+G      LG G  +A  L P+L++   L       VS G
Sbjct: 618 KVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE--ELAATRIVDVSIG 673

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVI-DRNIPSQVT-IEGCVPRNVACGWWHTL 470
             H   ++ D +V+ WG N  GQ G G+       P +V+ ++G   + ++ G  H+L
Sbjct: 674 DSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 95/174 (54%), Gaps = 5/174 (2%)

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
           + I  G   + VI+  G++   G G YG+ G G ++++ +   ++      I+ V++   
Sbjct: 406 QTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKG 465

Query: 363 ---HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
              HT+  +++G+V+++G   +G+LG G    +  P+L+  P L+      VS G RH+A
Sbjct: 466 SDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCVSAGYRHSA 524

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
            + +DG+++ WG   +G+LG GD   RNIP+ V     V   V+CG  HT+ L+
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG-EVSCGSSHTIALS 577



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 112/251 (44%), Gaps = 31/251 (12%)

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
           T+ AG   T  +S  G V   G G  G+LGLG       S +     + ++   RS    
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLG------DSNNQSTLKKLTFEPHRSIKKV 460

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN 344
             S  S+G                  H+   T  G + ++G G YG+ G G++  +  P 
Sbjct: 461 SSSKGSDG------------------HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPK 502

Query: 345 CVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSL 403
            +   L G  +  V+AG  H+  ++ DG++Y +G   FG+LG G   +  +P L+    +
Sbjct: 503 LIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK--DI 560

Query: 404 ENVHSKSVSCGARHTAVIADDGK-VFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRN 461
            NV    VSCG+ HT  ++ DG+ V+ +G    G+LG GD      P  +  ++G   R 
Sbjct: 561 SNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK 618

Query: 462 VACGWWHTLLL 472
           V  G   +L L
Sbjct: 619 VCAGSQSSLAL 629



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 86/324 (26%), Positives = 130/324 (40%), Gaps = 67/324 (20%)

Query: 52  GGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVK-AAAGWA 108
           G  G  +A +   ++ +WG  D   LG    ++ K+   P+    P +  +V   +AG+ 
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY---PKLIQGPLQGKVVVCVSAGYR 521

Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRS 168
           H  AVTE GE+YTWG  +       FG L  G     D   R    L + +S   +VS  
Sbjct: 522 HSAAVTEDGELYTWGEGD-------FGRLGHG-----DSNSRNIPTLVKDISNVGEVSCG 569

Query: 169 SGGTSS-GTDGR-----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVR 222
           S  T +   DGR     G G+ G                  GD N    P ++    G+ 
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKL--------------GHGDTNRVYKPKVIEALQGMF 615

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V AG + +LAL+  GQV+ WG G    LG GS       P  I              
Sbjct: 616 IRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE------------- 660

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                         +    +  ++ G  H   ++    +  +G    GQCGQG++   ++
Sbjct: 661 -------------ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPIT 707

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTI 365
            P  VS L GI I+ ++AG  H++
Sbjct: 708 KPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 45.4 bits (106), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 4/89 (4%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           +S   +VY +G N   QL  G  +    P+L  APS  +  ++++  G   T VI+ DG 
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKL--APSFSD--AQTIEAGQYCTFVISTDGS 423

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
           V   G   YG+LGLGD  +++   ++T E
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFE 452


>gi|334314433|ref|XP_003340037.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Monodelphis
            domestica]
          Length = 4790

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 84/244 (34%), Positives = 128/244 (52%), Gaps = 31/244 (12%)

Query: 232  HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
            H++AL++ G+V+ WG G  G+LG G+  R    P  I  ++                   
Sbjct: 4022 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQ------------------- 4061

Query: 292  GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                   G  V  ++CG +HSAV+T  G L TFG G YG+ G G+T ++  P  V++L G
Sbjct: 4062 -------GEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4114

Query: 352  IQIEGVAAGLWHTICISSDGD-VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
             QI  VA GL HT+ +S+DG  V+AFG   +G+LG G   A++ P+ +D   L  +  K 
Sbjct: 4115 YQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDV--LCGIGIKK 4172

Query: 411  VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            V+CG + +  +  DG V+ +G ++   L  G   + N P Q+  + G V  ++A G  HT
Sbjct: 4173 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDIAVGAEHT 4232

Query: 470  LLLA 473
            L LA
Sbjct: 4233 LALA 4236



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 105/200 (52%), Gaps = 6/200 (3%)

Query: 275  YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
            +G  R   L+    N   P      +  + + CG   + VI   G +L  G G YG+ GQ
Sbjct: 3931 WGAGRHGQLAEAGRNVMIPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQ 3990

Query: 335  GSTDDELSPNCVSSLLGIQIEGVAAGL---WHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
            G++DD      +S+L G  +  +        H++ ++  G+V+++G   +G+LG G    
Sbjct: 3991 GNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDR 4050

Query: 392  ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
            +  PR ++A   E V    +SCG +H+AV+  DGK+F +G   YG+LGLG+  ++ +P +
Sbjct: 4051 QRRPRQIEALQGEEV--IQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPER 4108

Query: 452  VT-IEGCVPRNVACGWWHTL 470
            VT +EG     VACG  HTL
Sbjct: 4109 VTALEGYQIGQVACGLNHTL 4128



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 110/393 (27%), Positives = 164/393 (41%), Gaps = 75/393 (19%)

Query: 41   TVGSAWRDVCGGGCGFAMAISD--------SRKLITWGSTDDLGQSYVTSGKHGEIPEPF 92
            +   A + +CG  C F +  +         S   +  G++DDL    V S   G +    
Sbjct: 3954 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVV--- 4010

Query: 93   PLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQS 152
                   +V +     H +A+TE GEV++WG  +       +G L  G   D+    RQ 
Sbjct: 4011 -----TQLVTSCGSDGHSMALTESGEVFSWGDGD-------YGKLGHGNS-DRQRRPRQI 4057

Query: 153  SFLT-EQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDEN 207
              L  E+V   S   + S   +S  DG+    G+G+ G    R+ L          G+ +
Sbjct: 4058 EALQGEEVIQMSCGFKHSAVVTS--DGKLFTFGNGDYG----RLGL----------GNTS 4101

Query: 208  LSAFPCLVTLNPGVRIATVAAGGRHTLALS-DIGQVWGWGYGGEGQLGLGSRIRMVSSPH 266
                P  VT   G +I  VA G  HTLA+S D   VW +G G  G+LGLG+     SSP 
Sbjct: 4102 NKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK-SSPQ 4160

Query: 267  PIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGW 326
             +  +                           G  +K +ACG + S  +T  G + TFG 
Sbjct: 4161 KVDVL--------------------------CGIGIKKVACGTQFSVALTKDGHVYTFGQ 4194

Query: 327  GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
                   +G   +   P  +  L G+ IE +A G  HT+ ++S GDVYA+G N  GQLG 
Sbjct: 4195 DRLIGLPEGRARNHNRPQQIPVLAGVVIEDIAVGAEHTLALASTGDVYAWGSNSEGQLGL 4254

Query: 387  GGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            G       P L+     +N+  + +S G  H+A
Sbjct: 4255 GHTNHVREPTLITILQGKNI--RQISAGRCHSA 4285



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 95/174 (54%), Gaps = 5/174 (2%)

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
           + I  G   + VI+  G++   G G YG+ G G ++++ +   ++      I+ V++   
Sbjct: 406 QTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKG 465

Query: 363 ---HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
              HT+  +++G+V+++G   +G+LG G    +  P+L+  P L+      VS G RH+A
Sbjct: 466 SDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCVSAGYRHSA 524

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
            + +DG+++ WG   +G+LG GD   RNIP+ V     V   V+CG  HT+ L+
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG-EVSCGSSHTIALS 577



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 132/298 (44%), Gaps = 35/298 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAG---GRHTLALSDIGQVWGWGYGGEGQLGLGSRI- 259
           GD N  +    +T  P   I  V++      HTLA +  G+V+ WG G  G+LG G+   
Sbjct: 438 GDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSST 497

Query: 260 ----RMVSSP---HPIPCIESSY---------------GKDRSAALSRGSVNSEG-PGFR 296
               +++  P     + C+ + Y               G+     L  G  NS   P   
Sbjct: 498 QKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557

Query: 297 VPGNYVKGIACGGRHSAVITDAGALL-TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
              + V  ++CG  H+  ++  G  + +FG G  G+ G G T+    P  + +L G+ I 
Sbjct: 558 KDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIR 617

Query: 356 GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL-PRLLDAPSLENVHSKSVSCG 414
            V AG   ++ ++S G VYA+G      LG G  +A  L P+L++   L       +S G
Sbjct: 618 KVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE--ELAATRIVDISIG 673

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVI-DRNIPSQVT-IEGCVPRNVACGWWHTL 470
             H   ++ D +V+ WG N  GQ G G+       P +V+ ++G   + ++ G  H+L
Sbjct: 674 DSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAGTSHSL 731



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 112/251 (44%), Gaps = 31/251 (12%)

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
           T+ AG   T  +S  G V   G G  G+LGLG       S +     + ++   RS    
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLG------DSNNQSTLKKLTFEPHRSIKKV 460

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN 344
             S  S+G                  H+   T  G + ++G G YG+ G G++  +  P 
Sbjct: 461 SSSKGSDG------------------HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPK 502

Query: 345 CVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSL 403
            +   L G  +  V+AG  H+  ++ DG++Y +G   FG+LG G   +  +P L+    +
Sbjct: 503 LIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK--DI 560

Query: 404 ENVHSKSVSCGARHTAVIADDGK-VFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRN 461
            NV    VSCG+ HT  ++ DG+ V+ +G    G+LG GD      P  +  ++G   R 
Sbjct: 561 SNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK 618

Query: 462 VACGWWHTLLL 472
           V  G   +L L
Sbjct: 619 VCAGSQSSLAL 629



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 86/324 (26%), Positives = 130/324 (40%), Gaps = 67/324 (20%)

Query: 52  GGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVK-AAAGWA 108
           G  G  +A +   ++ +WG  D   LG    ++ K+   P+    P +  +V   +AG+ 
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY---PKLIQGPLQGKVVVCVSAGYR 521

Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRS 168
           H  AVTE GE+YTWG  +       FG L  G     D   R    L + +S   +VS  
Sbjct: 522 HSAAVTEDGELYTWGEGD-------FGRLGHG-----DSNSRNIPTLVKDISNVGEVSCG 569

Query: 169 SGGTSS-GTDGR-----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVR 222
           S  T +   DGR     G G+ G                  GD N    P ++    G+ 
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKL--------------GHGDTNRVYKPKVIEALQGMF 615

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V AG + +LAL+  GQV+ WG G    LG GS       P  I              
Sbjct: 616 IRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE------------- 660

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                         +    +  I+ G  H   ++    +  +G    GQCGQG++   ++
Sbjct: 661 -------------ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPIT 707

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTI 365
            P  VS L G+ I+ ++AG  H++
Sbjct: 708 KPKKVSGLDGVAIQQISAGTSHSL 731



 Score = 45.4 bits (106), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 4/89 (4%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           +S   +VY +G N   QL  G  +    P+L  APS  +  ++++  G   T VI+ DG 
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKL--APSFSD--AQTIEAGQYCTFVISTDGS 423

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
           V   G   YG+LGLGD  +++   ++T E
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFE 452


>gi|440798633|gb|ELR19700.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein, partial [Acanthamoeba castellanii
           str. Neff]
          Length = 872

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 124/458 (27%), Positives = 189/458 (41%), Gaps = 99/458 (21%)

Query: 53  GCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLP--TEASIVKAAAGWA 108
            CG   +MA+ ++  +  WG   + GQ      K     +P  +       +V    G+ 
Sbjct: 35  ACGEQHSMAVGETGDVYVWGRAKE-GQLGNGERKAANALKPVRVEGLRHERVVAGVCGYN 93

Query: 109 HCVAVTEGGEVYTWGWK----ECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
           HC+AVT GG++Y WG      E   +   FG     +GL+ D  +R           RS 
Sbjct: 94  HCLAVTVGGKLYQWGMLHKHVEGSANKEYFGMAIGLSGLNSDRMKRMVG--------RSH 145

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAF-------PCLVTL 217
            +  + G         +GEE  +  R+              +N  +F       P +VT 
Sbjct: 146 STYYAAG--------ATGEELEELSRV--------------QNFGSFTPYTQPSPEVVTG 183

Query: 218 NPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
              V++  VAAG   +LA++  G+V+ WG+  + QLGLG R    S P  +P ++     
Sbjct: 184 LQHVKVVEVAAGYSFSLAVTSQGEVYSWGFNEKCQLGLGHRYNQ-SVPQLVPHLQ----- 237

Query: 278 DRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST 337
                                G ++    CG +HS +++ AG + TFG G++GQ G G +
Sbjct: 238 ---------------------GVHIVSATCGQQHSVLLSAAGHVYTFGLGVFGQLGHGVS 276

Query: 338 DDELSPNCVSSLL---------GIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLG--- 385
            DE  P  V +L+         G +I  +A G  HT+ +   G V+ +G  ++GQ G   
Sbjct: 277 SDERFPRRVEALVPAEEGVESAGERIVQIACGSHHTLALGVSGTVWTWGSAEYGQQGGTN 336

Query: 386 -----TGGDQAE-------TLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWN 433
                  G +AE         PR L     +  H   VSCG  H    A DG V+ WGW 
Sbjct: 337 AYEDWATGQRAEKSAAMICATPRSLSG-CFDGKHIAHVSCGHLHNLATARDGSVYSWGWG 395

Query: 434 KYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTL 470
            YG LG G+   + +P  +  I G      A G  H+L
Sbjct: 396 SYGVLGHGNHRFQLVPKLIRRIGGERIVQTAAGAKHSL 433



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 94/339 (27%), Positives = 142/339 (41%), Gaps = 98/339 (28%)

Query: 203 SGDENLSAF-PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +G +N  A  P L+    G RI +VA G +H++A+ + G V+ WG   EGQLG G     
Sbjct: 10  AGRDNKEALEPILLERFRGKRIRSVACGEQHSMAVGETGDVYVWGRAKEGQLGNG----- 64

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
                           +R AA +   V  EG         V G+ CG  H   +T  G L
Sbjct: 65  ----------------ERKAANALKPVRVEGLRHE---RVVAGV-CGYNHCLAVTVGGKL 104

Query: 322 LTFGWGLYGQCGQGS------------------------------------TDDEL---- 341
             + WG+  +  +GS                                    T +EL    
Sbjct: 105 --YQWGMLHKHVEGSANKEYFGMAIGLSGLNSDRMKRMVGRSHSTYYAAGATGEELEELS 162

Query: 342 --------------SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG 387
                         SP  V+ L  +++  VAAG   ++ ++S G+VY++G N+  QLG G
Sbjct: 163 RVQNFGSFTPYTQPSPEVVTGLQHVKVVEVAAGYSFSLAVTSQGEVYSWGFNEKCQLGLG 222

Query: 388 GDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
               +++P+L+  P L+ VH  S +CG +H+ +++  G V+ +G   +GQLG G   D  
Sbjct: 223 HRYNQSVPQLV--PHLQGVHIVSATCGQQHSVLLSAAGHVYTFGLGVFGQLGHGVSSDER 280

Query: 448 IPSQVTIEGCVPR------------NVACGWWHTLLLAV 474
            P +V  E  VP              +ACG  HTL L V
Sbjct: 281 FPRRV--EALVPAEEGVESAGERIVQIACGSHHTLALGV 317



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 79/332 (23%), Positives = 124/332 (37%), Gaps = 83/332 (25%)

Query: 50  CGGGCGFAMAISDSRKLITWGSTDD----LGQSYVTSGKHGEIPEPFPLPTEASIVKAAA 105
              G  F++A++   ++ +WG  +     LG  Y  S     +P+  P      IV A  
Sbjct: 192 VAAGYSFSLAVTSQGEVYSWGFNEKCQLGLGHRYNQS-----VPQLVPHLQGVHIVSATC 246

Query: 106 GWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQV 165
           G  H V ++  G VYT+G         VFG L  G   D+    R      E + P    
Sbjct: 247 GQQHSVLLSAAGHVYTFGLG-------VFGQLGHGVSSDERFPRR-----VEALVP---- 290

Query: 166 SRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIAT 225
                            EEG +                              + G RI  
Sbjct: 291 ----------------AEEGVE------------------------------SAGERIVQ 304

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
           +A G  HTLAL   G VW WG    GQ G           +      +    ++SAA+  
Sbjct: 305 IACGSHHTLALGVSGTVWTWGSAEYGQQG---------GTNAYEDWATGQRAEKSAAMIC 355

Query: 286 GSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNC 345
            +  S    F   G ++  ++CG  H+      G++ ++GWG YG  G G+   +L P  
Sbjct: 356 ATPRSLSGCF--DGKHIAHVSCGHLHNLATARDGSVYSWGWGSYGVLGHGNHRFQLVPKL 413

Query: 346 VSSLLGIQIEGVAAGLWHTICISS-DGDVYAF 376
           +  + G +I   AAG  H++ +++    ++AF
Sbjct: 414 IRRIGGERIVQTAAGAKHSLAVNAGSSTLFAF 445



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 50/108 (46%), Gaps = 1/108 (0%)

Query: 325 GWGLYGQCGQGSTDDE-LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQ 383
           G G  G+ G G  + E L P  +    G +I  VA G  H++ +   GDVY +G  + GQ
Sbjct: 1   GTGKVGELGAGRDNKEALEPILLERFRGKRIRSVACGEQHSMAVGETGDVYVWGRAKEGQ 60

Query: 384 LGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWG 431
           LG G  +A    + +    L +    +  CG  H   +   GK++ WG
Sbjct: 61  LGNGERKAANALKPVRVEGLRHERVVAGVCGYNHCLAVTVGGKLYQWG 108


>gi|357613847|gb|EHJ68745.1| hypothetical protein KGM_02265 [Danaus plexippus]
          Length = 1039

 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 89/263 (33%), Positives = 128/263 (48%), Gaps = 34/263 (12%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG--LGSRIRMVSSPHPIP 269
           P LV    G  ++T+A G +H++AL + GQ + WG    GQLG  LGS            
Sbjct: 79  PVLVDTFKGCTLSTIACGLQHSMALDEWGQPFSWGSDSMGQLGSNLGS------------ 126

Query: 270 CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
                + +D+   +   +  +           V  +ACG  H+ V+T+ G L  +G   Y
Sbjct: 127 -----HAQDKPKIIKTLATKN-----------VIQVACGSYHTVVLTNNGDLYAWGANSY 170

Query: 330 GQCGQGS-TDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGG 388
           GQCG G+ ++ E +P  +SS+LGI I  +A G  HT  +S  G V+ +G N  GQLG   
Sbjct: 171 GQCGLGNRSNKETTPQALSSILGIPIALIACGSNHTFALSQSGAVFGWGKNSHGQLGLQD 230

Query: 389 DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNI 448
            ++   P  L   +L NV    +SCG   TA +  DG VF  G  +YGQ G G+  D  +
Sbjct: 231 RESRCYPTHLK--TLRNVKVCHISCGEDFTAFLTLDGGVFTCGAGEYGQTGHGNTKDELV 288

Query: 449 PSQVT-IEGCVPRNVACGWWHTL 470
           P +V  + G     VACG  H L
Sbjct: 289 PRKVMELMGSTVTQVACGRRHML 311



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 102/235 (43%), Gaps = 33/235 (14%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
            +  VA G  HT+ L++ G ++ WG    GQ GLG+R    ++P  +  I          
Sbjct: 142 NVIQVACGSYHTVVLTNNGDLYAWGANSYGQCGLGNRSNKETTPQALSSI---------- 191

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTDD 339
                          +P   +  IACG  H+  ++ +GA+  FGWG   +GQ G    + 
Sbjct: 192 -------------LGIP---IALIACGSNHTFALSQSGAV--FGWGKNSHGQLGLQDRES 233

Query: 340 ELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLD 399
              P  + +L  +++  ++ G   T  ++ DG V+  G  ++GQ G G  + E +PR   
Sbjct: 234 RCYPTHLKTLRNVKVCHISCGEDFTAFLTLDGGVFTCGAGEYGQTGHGNTKDELVPR--K 291

Query: 400 APSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI 454
              L       V+CG RH      +  + C G+   GQLG   +    +P+ VT 
Sbjct: 292 VMELMGSTVTQVACGRRHMLCRVGERILAC-GYGARGQLGCPHMAFALVPTPVTF 345



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 50/147 (34%), Positives = 64/147 (43%), Gaps = 27/147 (18%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G+ IA +A G  HT ALS  G V+GWG    GQLGL  R           C  +     R
Sbjct: 193 GIPIALIACGSNHTFALSQSGAVFGWGKNSHGQLGLQDRESR--------CYPTHLKTLR 244

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDD 339
           +  +                     I+CG   +A +T  G + T G G YGQ G G+T D
Sbjct: 245 NVKVCH-------------------ISCGEDFTAFLTLDGGVFTCGAGEYGQTGHGNTKD 285

Query: 340 ELSPNCVSSLLGIQIEGVAAGLWHTIC 366
           EL P  V  L+G  +  VA G  H +C
Sbjct: 286 ELVPRKVMELMGSTVTQVACGRRHMLC 312



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 68/124 (54%), Gaps = 5/124 (4%)

Query: 353 QIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAE-TLPRLLDAPSLENVHSKSV 411
            I+ ++AG +HT+ +S++G +Y  G N+ GQLG   + A+ T P L+D  + +     ++
Sbjct: 36  HIQQISAGEFHTLYLSNNGHLYTCGSNEVGQLGRQTNSADGTSPVLVD--TFKGCTLSTI 93

Query: 412 SCGARHTAVIADDGKVFCWGWNKYGQLG--LGDVIDRNIPSQVTIEGCVPRNVACGWWHT 469
           +CG +H+  + + G+ F WG +  GQLG  LG           T+       VACG +HT
Sbjct: 94  ACGLQHSMALDEWGQPFSWGSDSMGQLGSNLGSHAQDKPKIIKTLATKNVIQVACGSYHT 153

Query: 470 LLLA 473
           ++L 
Sbjct: 154 VVLT 157


>gi|350596671|ref|XP_003361480.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
            [Sus scrofa]
          Length = 2561

 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 85/244 (34%), Positives = 128/244 (52%), Gaps = 31/244 (12%)

Query: 232  HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
            H++AL++ G+V+ WG G  G+LG G+  R    P  I  ++                   
Sbjct: 1704 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQ------------------- 1743

Query: 292  GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                   G  V  ++CG +HSAV+T  G L TFG G YG+ G G+T ++  P  V++L G
Sbjct: 1744 -------GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 1796

Query: 352  IQIEGVAAGLWHTICISSDGD-VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
             QI  VA GL HT+ +S+DG  V+AFG   +G+LG G   A++ P+ +D   L  +  K 
Sbjct: 1797 YQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDV--LCGIGIKK 1854

Query: 411  VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            V+CG + +  +  DG V+ +G ++   L  G   + N P Q+  + G V  +VA G  HT
Sbjct: 1855 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHT 1914

Query: 470  LLLA 473
            L LA
Sbjct: 1915 LALA 1918



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 107/203 (52%), Gaps = 6/203 (2%)

Query: 275  YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
            +G  R   L+    N   P      +  + + CG   + VI   G +L  G G YG+ GQ
Sbjct: 1613 WGAGRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQ 1672

Query: 335  GSTDDELSPNCVSSLLGIQIEGVAAGL---WHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
            G++DD      +S+L G  +  +        H++ ++  G+V+++G   +G+LG G    
Sbjct: 1673 GNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDR 1732

Query: 392  ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
            +  PR ++A   E V    +SCG +H+AV+  DGK+F +G   YG+LGLG+  ++ +P +
Sbjct: 1733 QRRPRQIEALQGEEV--VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPER 1790

Query: 452  VT-IEGCVPRNVACGWWHTLLLA 473
            VT +EG     VACG  HTL ++
Sbjct: 1791 VTALEGYQIGQVACGLNHTLAVS 1813



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 164/393 (41%), Gaps = 75/393 (19%)

Query: 41   TVGSAWRDVCGGGCGFAMAISD--------SRKLITWGSTDDLGQSYVTSGKHGEIPEPF 92
            +   A + +CG  C F +  +         S   +  G++DDL    V S   G +    
Sbjct: 1636 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFV---- 1691

Query: 93   PLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQS 152
                   +V +     H +A+TE GEV++WG  +       +G L  G   D+    RQ 
Sbjct: 1692 ----VTQLVTSCGSDGHSMALTESGEVFSWGDGD-------YGKLGHGNS-DRQRRPRQI 1739

Query: 153  SFLT-EQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDEN 207
              L  E+V   S   + S   +S  DG+    G+G+ G    R+ L          G+ +
Sbjct: 1740 EALQGEEVVQMSCGFKHSAVVTS--DGKLFTFGNGDYG----RLGL----------GNTS 1783

Query: 208  LSAFPCLVTLNPGVRIATVAAGGRHTLALS-DIGQVWGWGYGGEGQLGLGSRIRMVSSPH 266
                P  VT   G +I  VA G  HTLA+S D   VW +G G  G+LGLG+     SSP 
Sbjct: 1784 NKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK-SSPQ 1842

Query: 267  PIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGW 326
             +  +                           G  +K +ACG + S  +T  G + TFG 
Sbjct: 1843 KVDVL--------------------------CGIGIKKVACGTQFSVALTKDGHVYTFGQ 1876

Query: 327  GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
                   +G   +   P  +  L G+ IE VA G  HT+ ++S GDVYA+G N  GQLG 
Sbjct: 1877 DRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL 1936

Query: 387  GGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            G       P L+     +NV  + +S G  H+A
Sbjct: 1937 GHTNHVREPTLVTVLQGKNV--RQISAGRCHSA 1967


>gi|383852591|ref|XP_003701810.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Megachile rotundata]
          Length = 1135

 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 82/247 (33%), Positives = 120/247 (48%), Gaps = 30/247 (12%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
           VA G  HTLA+++ GQ++ WG   EGQLGL S+  +   PH +  + +S           
Sbjct: 166 VACGAHHTLAVNEWGQLFSWGSNAEGQLGLNSKNLIECVPHMVRALGTSV---------- 215

Query: 286 GSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGS-TDDELSPN 344
                           V  +ACG  H   +T+ G L ++G    GQ G G+   +E+ P 
Sbjct: 216 ----------------VVQVACGINHVLALTNNGKLYSWGSNSDGQLGLGTDVKNEIKPK 259

Query: 345 CVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLE 404
            +SSL G+ I  +  G +H++ IS  G V+ +G N FGQLG    +   LPR L   +L+
Sbjct: 260 LISSLAGVPIAFITCGGYHSMAISKSGAVFGWGKNTFGQLGLNDTRNRNLPRQLQ--TLQ 317

Query: 405 NVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVA 463
           N      +CG   +  +  DG VF  G   YGQLG G+  +  +P QV  + G     ++
Sbjct: 318 NAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGNTSNEILPRQVMELMGSTVTQIS 377

Query: 464 CGWWHTL 470
           CG  HTL
Sbjct: 378 CGKRHTL 384



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 84/314 (26%), Positives = 124/314 (39%), Gaps = 71/314 (22%)

Query: 102 KAAAGWAHCVAVTEGGEVYTWG-------------WKECVPSGRVFGDLSTGTGLDKDVF 148
           K A G  H +AV E G++++WG               ECVP   +   L T   +     
Sbjct: 165 KVACGAHHTLAVNEWGQLFSWGSNAEGQLGLNSKNLIECVP--HMVRALGTSVVVQVACG 222

Query: 149 ERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENL 208
                 LT      S  S S G    GTD +   +                         
Sbjct: 223 INHVLALTNNGKLYSWGSNSDGQLGLGTDVKNEIK------------------------- 257

Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
              P L++   GV IA +  GG H++A+S  G V+GWG    GQLGL    R  + P  +
Sbjct: 258 ---PKLISSLAGVPIAFITCGGYHSMAISKSGAVFGWGKNTFGQLGLNDT-RNRNLPRQL 313

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL 328
             ++++                           V   ACG   S  +T  G + T G G+
Sbjct: 314 QTLQNAK--------------------------VCYAACGEEFSVFLTVDGGVFTCGAGM 347

Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTI-CISSDGDVYAFGGNQFGQLGTG 387
           YGQ G G+T +E+ P  V  L+G  +  ++ G  HT+  + S G VYA+G    GQLG  
Sbjct: 348 YGQLGHGNTSNEILPRQVMELMGSTVTQISCGKRHTLGLVPSRGRVYAWGLGGAGQLGNN 407

Query: 388 GDQAETLPRLLDAP 401
             ++   P+++  P
Sbjct: 408 ITRSVATPQVVHGP 421



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 61/168 (36%), Positives = 86/168 (51%), Gaps = 15/168 (8%)

Query: 313 AVITDAGALLTFGWG--LYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICIS 368
           + +TD      F WG  ++G+ G G  +DE  L P  +      +IE +A G  +T+ I+
Sbjct: 71  STVTDKNM---FCWGSTIHGELGLGGIEDENILVPRELDFQKATEIEQIACGENYTVLIT 127

Query: 369 SDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVF 428
            DG VY+ G N +GQLG      +   RL   P L+    K V+CGA HT  + + G++F
Sbjct: 128 RDGQVYSCGNNDYGQLG----HEKGRKRLQLIPGLDAFVFKKVACGAHHTLAVNEWGQLF 183

Query: 429 CWGWNKYGQLGLG--DVIDRNIPSQVTIEGC-VPRNVACGWWHTLLLA 473
            WG N  GQLGL   ++I+  +P  V   G  V   VACG  H L L 
Sbjct: 184 SWGSNAEGQLGLNSKNLIE-CVPHMVRALGTSVVVQVACGINHVLALT 230



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 99/226 (43%), Gaps = 55/226 (24%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ--------------------------- 334
           ++ IACG  ++ +IT  G + + G   YGQ G                            
Sbjct: 113 IEQIACGENYTVLITRDGQVYSCGNNDYGQLGHEKGRKRLQLIPGLDAFVFKKVACGAHH 172

Query: 335 -------------GSTDD-----------ELSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
                        GS  +           E  P+ V +L    +  VA G+ H + ++++
Sbjct: 173 TLAVNEWGQLFSWGSNAEGQLGLNSKNLIECVPHMVRALGTSVVVQVACGINHVLALTNN 232

Query: 371 GDVYAFGGNQFGQLGTGGD-QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFC 429
           G +Y++G N  GQLG G D + E  P+L+   SL  V    ++CG  H+  I+  G VF 
Sbjct: 233 GKLYSWGSNSDGQLGLGTDVKNEIKPKLIS--SLAGVPIAFITCGGYHSMAISKSGAVFG 290

Query: 430 WGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLAV 474
           WG N +GQLGL D  +RN+P Q+ T++       ACG   ++ L V
Sbjct: 291 WGKNTFGQLGLNDTRNRNLPRQLQTLQNAKVCYAACGEEFSVFLTV 336


>gi|397515719|ref|XP_003828093.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Pan paniscus]
          Length = 4798

 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 84/244 (34%), Positives = 127/244 (52%), Gaps = 31/244 (12%)

Query: 232  HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
            H++AL++ G+V+ WG G  G+LG G+  R    P  I  ++                   
Sbjct: 4030 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQ------------------- 4069

Query: 292  GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                   G  V  ++CG +HSAV+T  G L TFG G YG+ G G+T ++  P  V++L G
Sbjct: 4070 -------GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4122

Query: 352  IQIEGVAAGLWHTICISSDGD-VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
             QI  VA GL HT+ +S DG  V+AFG   +G+LG G   A++ P+ +D   L  +  K 
Sbjct: 4123 YQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDV--LCGIGIKK 4180

Query: 411  VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            V+CG + +  +  DG V+ +G ++   L  G   + N P Q+  + G +  +VA G  HT
Sbjct: 4181 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHT 4240

Query: 470  LLLA 473
            L LA
Sbjct: 4241 LALA 4244



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 115/237 (48%), Gaps = 36/237 (15%)

Query: 242  VWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNY 301
            V+ WG G  GQL    R  MV +                            P F    + 
Sbjct: 3936 VYLWGAGRHGQLAEAGRNVMVPAA--------------------------APSF----SQ 3965

Query: 302  VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
             + + CG   + VI   G +L  G G YG+ GQG++DD      +S+L G  +  +    
Sbjct: 3966 AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSC 4025

Query: 362  ---WHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
                H++ ++  G+V+++G   +G+LG G    +  PR ++A   E V    +SCG +H+
Sbjct: 4026 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEV--VQMSCGFKHS 4083

Query: 419  AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLAV 474
            AV+  DGK+F +G   YG+LGLG+  ++ +P +VT +EG     VACG  HTL ++V
Sbjct: 4084 AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSV 4140



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 113/393 (28%), Positives = 165/393 (41%), Gaps = 75/393 (19%)

Query: 41   TVGSAWRDVCGGGCGFAMAISD--------SRKLITWGSTDDLGQSYVTSGKHGEIPEPF 92
            +   A + +CG  C F +  +         S   +  G++DDL    V S   G +    
Sbjct: 3962 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVV--- 4018

Query: 93   PLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQS 152
                   +V +     H +A+TE GEV++WG  +       +G L  G   D+    RQ 
Sbjct: 4019 -----TQLVTSCGSDGHSMALTESGEVFSWGDGD-------YGKLGHGNS-DRQRRPRQI 4065

Query: 153  SFLT-EQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDEN 207
              L  E+V   S   + S   +S  DG+    G+G+ G    R+ L          G+ +
Sbjct: 4066 EALQGEEVVQMSCGFKHSAVVTS--DGKLFTFGNGDYG----RLGL----------GNTS 4109

Query: 208  LSAFPCLVTLNPGVRIATVAAGGRHTLALS-DIGQVWGWGYGGEGQLGLGSRIRMVSSPH 266
                P  VT   G +I  VA G  HTLA+S D   VW +G G  G+LGLG+     SSP 
Sbjct: 4110 NKKLPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNSTAK-SSPQ 4168

Query: 267  PIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGW 326
             I  +                           G  +K +ACG + S  +T  G + TFG 
Sbjct: 4169 KIDVL--------------------------CGIGIKKVACGTQFSVALTKDGHVYTFGQ 4202

Query: 327  GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
                   +G   +   P  +  L G+ IE VA G  HT+ ++S+GDVYA+G N  GQLG 
Sbjct: 4203 DRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL 4262

Query: 387  GGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            G       P L+     +NV  + +S G  H+A
Sbjct: 4263 GHTNHVREPTLVTGLQGKNV--RQISAGRCHSA 4293



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 132/298 (44%), Gaps = 35/298 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAG---GRHTLALSDIGQVWGWGYGGEGQLGLGSRI- 259
           GD N  +    +T  P   I  V++      HTLA +  G+V+ WG G  G+LG G+   
Sbjct: 438 GDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSST 497

Query: 260 ----RMVSSP---HPIPCIESSY---------------GKDRSAALSRGSVNSEG-PGFR 296
               +++  P     + C+ + Y               G+     L  G  NS   P   
Sbjct: 498 QKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557

Query: 297 VPGNYVKGIACGGRHSAVITDAGALL-TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
              + V  ++CG  H+  ++  G  + +FG G  G+ G G T+    P  + +L G+ I 
Sbjct: 558 KDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIR 617

Query: 356 GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL-PRLLDAPSLENVHSKSVSCG 414
            V AG   ++ ++S G VYA+G      LG G  +A  L P+L++   L       VS G
Sbjct: 618 KVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE--ELAATRIVDVSIG 673

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVI-DRNIPSQVT-IEGCVPRNVACGWWHTL 470
             H   ++ D +V+ WG N  GQ G G+       P +V+ ++G   + ++ G  H+L
Sbjct: 674 DSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 95/174 (54%), Gaps = 5/174 (2%)

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
           + I  G   + VI+  G++   G G YG+ G G ++++ +   ++      I+ V++   
Sbjct: 406 QTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKG 465

Query: 363 ---HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
              HT+  +++G+V+++G   +G+LG G    +  P+L+  P L+      VS G RH+A
Sbjct: 466 SDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCVSAGYRHSA 524

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
            + +DG+++ WG   +G+LG GD   RNIP+ V     V   V+CG  HT+ L+
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG-EVSCGSSHTIALS 577



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 112/251 (44%), Gaps = 31/251 (12%)

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
           T+ AG   T  +S  G V   G G  G+LGLG       S +     + ++   RS    
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLG------DSNNQSTLKKLTFEPHRSIKKV 460

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN 344
             S  S+G                  H+   T  G + ++G G YG+ G G++  +  P 
Sbjct: 461 SSSKGSDG------------------HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPK 502

Query: 345 CVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSL 403
            +   L G  +  V+AG  H+  ++ DG++Y +G   FG+LG G   +  +P L+    +
Sbjct: 503 LIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK--DI 560

Query: 404 ENVHSKSVSCGARHTAVIADDGK-VFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRN 461
            NV    VSCG+ HT  ++ DG+ V+ +G    G+LG GD      P  +  ++G   R 
Sbjct: 561 SNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK 618

Query: 462 VACGWWHTLLL 472
           V  G   +L L
Sbjct: 619 VCAGSQSSLAL 629



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 86/324 (26%), Positives = 130/324 (40%), Gaps = 67/324 (20%)

Query: 52  GGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVK-AAAGWA 108
           G  G  +A +   ++ +WG  D   LG    ++ K+   P+    P +  +V   +AG+ 
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY---PKLIQGPLQGKVVVCVSAGYR 521

Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRS 168
           H  AVTE GE+YTWG  +       FG L  G     D   R    L + +S   +VS  
Sbjct: 522 HSAAVTEDGELYTWGEGD-------FGRLGHG-----DSNSRNIPTLVKDISNVGEVSCG 569

Query: 169 SGGTSS-GTDGR-----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVR 222
           S  T +   DGR     G G+ G                  GD N    P ++    G+ 
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKL--------------GHGDTNRVYKPKVIEALQGMF 615

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V AG + +LAL+  GQV+ WG G    LG GS       P  I              
Sbjct: 616 IRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE------------- 660

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                         +    +  ++ G  H   ++    +  +G    GQCGQG++   ++
Sbjct: 661 -------------ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPIT 707

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTI 365
            P  VS L GI I+ ++AG  H++
Sbjct: 708 KPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 45.4 bits (106), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 4/89 (4%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           +S   +VY +G N   QL  G  +    P+L  APS  +  ++++  G   T VI+ DG 
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKL--APSFSD--AQTIEAGQYCTFVISTDGS 423

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
           V   G   YG+LGLGD  +++   ++T E
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFE 452


>gi|114657534|ref|XP_001174017.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1 [Pan
            troglodytes]
 gi|410226250|gb|JAA10344.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410226252|gb|JAA10345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410263976|gb|JAA19954.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410293838|gb|JAA25519.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410293840|gb|JAA25520.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410336799|gb|JAA37346.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
          Length = 4861

 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 84/244 (34%), Positives = 127/244 (52%), Gaps = 31/244 (12%)

Query: 232  HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
            H++AL++ G+V+ WG G  G+LG G+  R    P  I  ++                   
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQ------------------- 4132

Query: 292  GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                   G  V  ++CG +HSAV+T  G L TFG G YG+ G G+T ++  P  V++L G
Sbjct: 4133 -------GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4185

Query: 352  IQIEGVAAGLWHTICISSDGD-VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
             QI  VA GL HT+ +S DG  V+AFG   +G+LG G   A++ P+ +D   L  +  K 
Sbjct: 4186 YQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDV--LCGIGIKK 4243

Query: 411  VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            V+CG + +  +  DG V+ +G ++   L  G   + N P Q+  + G +  +VA G  HT
Sbjct: 4244 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHT 4303

Query: 470  LLLA 473
            L LA
Sbjct: 4304 LALA 4307



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 108/204 (52%), Gaps = 6/204 (2%)

Query: 275  YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
            +G  R   L+    N   P      +  + + CG   + VI   G +L  G G YG+ GQ
Sbjct: 4002 WGAGRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQ 4061

Query: 335  GSTDDELSPNCVSSLLGIQIEGVAAGL---WHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
            G++DD      +S+L G  +  +        H++ ++  G+V+++G   +G+LG G    
Sbjct: 4062 GNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDR 4121

Query: 392  ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
            +  PR ++A   E V    +SCG +H+AV+  DGK+F +G   YG+LGLG+  ++ +P +
Sbjct: 4122 QRRPRQIEALQGEEV--VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPER 4179

Query: 452  VT-IEGCVPRNVACGWWHTLLLAV 474
            VT +EG     VACG  HTL ++V
Sbjct: 4180 VTALEGYQIGQVACGLNHTLAVSV 4203



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 113/393 (28%), Positives = 165/393 (41%), Gaps = 75/393 (19%)

Query: 41   TVGSAWRDVCGGGCGFAMAISD--------SRKLITWGSTDDLGQSYVTSGKHGEIPEPF 92
            +   A + +CG  C F +  +         S   +  G++DDL    V S   G +    
Sbjct: 4025 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVV--- 4081

Query: 93   PLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQS 152
                   +V +     H +A+TE GEV++WG  +       +G L  G   D+    RQ 
Sbjct: 4082 -----TQLVTSCGSDGHSMALTESGEVFSWGDGD-------YGKLGHGNS-DRQRRPRQI 4128

Query: 153  SFLT-EQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDEN 207
              L  E+V   S   + S   +S  DG+    G+G+ G    R+ L          G+ +
Sbjct: 4129 EALQGEEVVQMSCGFKHSAVVTS--DGKLFTFGNGDYG----RLGL----------GNTS 4172

Query: 208  LSAFPCLVTLNPGVRIATVAAGGRHTLALS-DIGQVWGWGYGGEGQLGLGSRIRMVSSPH 266
                P  VT   G +I  VA G  HTLA+S D   VW +G G  G+LGLG+     SSP 
Sbjct: 4173 NKKLPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNSTAK-SSPQ 4231

Query: 267  PIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGW 326
             I  +                           G  +K +ACG + S  +T  G + TFG 
Sbjct: 4232 KIDVL--------------------------CGIGIKKVACGTQFSVALTKDGHVYTFGQ 4265

Query: 327  GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
                   +G   +   P  +  L G+ IE VA G  HT+ ++S+GDVYA+G N  GQLG 
Sbjct: 4266 DRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL 4325

Query: 387  GGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            G       P L+     +NV  + +S G  H+A
Sbjct: 4326 GHTNHVREPTLVTGLQGKNV--RQISAGRCHSA 4356



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 132/298 (44%), Gaps = 35/298 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAG---GRHTLALSDIGQVWGWGYGGEGQLGLGSRI- 259
           GD N  +    +T  P   I  V++      HTLA +  G+V+ WG G  G+LG G+   
Sbjct: 438 GDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSST 497

Query: 260 ----RMVSSP---HPIPCIESSY---------------GKDRSAALSRGSVNSEG-PGFR 296
               +++  P     + C+ + Y               G+     L  G  NS   P   
Sbjct: 498 QKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557

Query: 297 VPGNYVKGIACGGRHSAVITDAGALL-TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
              + V  ++CG  H+  ++  G  + +FG G  G+ G G T+    P  + +L G+ I 
Sbjct: 558 KDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIR 617

Query: 356 GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL-PRLLDAPSLENVHSKSVSCG 414
            V AG   ++ ++S G VYA+G      LG G  +A  L P+L++   L       VS G
Sbjct: 618 KVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE--ELAATRIVDVSIG 673

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVI-DRNIPSQVT-IEGCVPRNVACGWWHTL 470
             H   ++ D +V+ WG N  GQ G G+       P +V+ ++G   + ++ G  H+L
Sbjct: 674 DSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 95/174 (54%), Gaps = 5/174 (2%)

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
           + I  G   + VI+  G++   G G YG+ G G ++++ +   ++      I+ V++   
Sbjct: 406 QTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKG 465

Query: 363 ---HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
              HT+  +++G+V+++G   +G+LG G    +  P+L+  P L+      VS G RH+A
Sbjct: 466 SDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCVSAGYRHSA 524

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
            + +DG+++ WG   +G+LG GD   RNIP+ V     V   V+CG  HT+ L+
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG-EVSCGSSHTIALS 577



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 112/251 (44%), Gaps = 31/251 (12%)

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
           T+ AG   T  +S  G V   G G  G+LGLG       S +     + ++   RS    
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLG------DSNNQSTLKKLTFEPHRSIKKV 460

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN 344
             S  S+G                  H+   T  G + ++G G YG+ G G++  +  P 
Sbjct: 461 SSSKGSDG------------------HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPK 502

Query: 345 CVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSL 403
            +   L G  +  V+AG  H+  ++ DG++Y +G   FG+LG G   +  +P L+    +
Sbjct: 503 LIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK--DI 560

Query: 404 ENVHSKSVSCGARHTAVIADDGK-VFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRN 461
            NV    VSCG+ HT  ++ DG+ V+ +G    G+LG GD      P  +  ++G   R 
Sbjct: 561 SNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK 618

Query: 462 VACGWWHTLLL 472
           V  G   +L L
Sbjct: 619 VCAGSQSSLAL 629



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 86/324 (26%), Positives = 130/324 (40%), Gaps = 67/324 (20%)

Query: 52  GGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVK-AAAGWA 108
           G  G  +A +   ++ +WG  D   LG    ++ K+   P+    P +  +V   +AG+ 
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY---PKLIQGPLQGKVVVCVSAGYR 521

Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRS 168
           H  AVTE GE+YTWG  +       FG L  G     D   R    L + +S   +VS  
Sbjct: 522 HSAAVTEDGELYTWGEGD-------FGRLGHG-----DSNSRNIPTLVKDISNVGEVSCG 569

Query: 169 SGGTSS-GTDGR-----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVR 222
           S  T +   DGR     G G+ G                  GD N    P ++    G+ 
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKL--------------GHGDTNRVYKPKVIEALQGMF 615

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V AG + +LAL+  GQV+ WG G    LG GS       P  I              
Sbjct: 616 IRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE------------- 660

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                         +    +  ++ G  H   ++    +  +G    GQCGQG++   ++
Sbjct: 661 -------------ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPIT 707

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTI 365
            P  VS L GI I+ ++AG  H++
Sbjct: 708 KPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 45.4 bits (106), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 4/89 (4%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           +S   +VY +G N   QL  G  +    P+L  APS  +  ++++  G   T VI+ DG 
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKL--APSFSD--AQTIEAGQYCTFVISTDGS 423

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
           V   G   YG+LGLGD  +++   ++T E
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFE 452


>gi|410336797|gb|JAA37345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
          Length = 4854

 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 84/244 (34%), Positives = 127/244 (52%), Gaps = 31/244 (12%)

Query: 232  HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
            H++AL++ G+V+ WG G  G+LG G+  R    P  I  ++                   
Sbjct: 4086 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQ------------------- 4125

Query: 292  GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                   G  V  ++CG +HSAV+T  G L TFG G YG+ G G+T ++  P  V++L G
Sbjct: 4126 -------GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4178

Query: 352  IQIEGVAAGLWHTICISSDGD-VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
             QI  VA GL HT+ +S DG  V+AFG   +G+LG G   A++ P+ +D   L  +  K 
Sbjct: 4179 YQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDV--LCGIGIKK 4236

Query: 411  VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            V+CG + +  +  DG V+ +G ++   L  G   + N P Q+  + G +  +VA G  HT
Sbjct: 4237 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHT 4296

Query: 470  LLLA 473
            L LA
Sbjct: 4297 LALA 4300



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 108/204 (52%), Gaps = 6/204 (2%)

Query: 275  YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
            +G  R   L+    N   P      +  + + CG   + VI   G +L  G G YG+ GQ
Sbjct: 3995 WGAGRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQ 4054

Query: 335  GSTDDELSPNCVSSLLGIQIEGVAAGL---WHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
            G++DD      +S+L G  +  +        H++ ++  G+V+++G   +G+LG G    
Sbjct: 4055 GNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDR 4114

Query: 392  ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
            +  PR ++A   E V    +SCG +H+AV+  DGK+F +G   YG+LGLG+  ++ +P +
Sbjct: 4115 QRRPRQIEALQGEEV--VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPER 4172

Query: 452  VT-IEGCVPRNVACGWWHTLLLAV 474
            VT +EG     VACG  HTL ++V
Sbjct: 4173 VTALEGYQIGQVACGLNHTLAVSV 4196



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 113/393 (28%), Positives = 165/393 (41%), Gaps = 75/393 (19%)

Query: 41   TVGSAWRDVCGGGCGFAMAISD--------SRKLITWGSTDDLGQSYVTSGKHGEIPEPF 92
            +   A + +CG  C F +  +         S   +  G++DDL    V S   G +    
Sbjct: 4018 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVV--- 4074

Query: 93   PLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQS 152
                   +V +     H +A+TE GEV++WG  +       +G L  G   D+    RQ 
Sbjct: 4075 -----TQLVTSCGSDGHSMALTESGEVFSWGDGD-------YGKLGHGNS-DRQRRPRQI 4121

Query: 153  SFLT-EQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDEN 207
              L  E+V   S   + S   +S  DG+    G+G+ G    R+ L          G+ +
Sbjct: 4122 EALQGEEVVQMSCGFKHSAVVTS--DGKLFTFGNGDYG----RLGL----------GNTS 4165

Query: 208  LSAFPCLVTLNPGVRIATVAAGGRHTLALS-DIGQVWGWGYGGEGQLGLGSRIRMVSSPH 266
                P  VT   G +I  VA G  HTLA+S D   VW +G G  G+LGLG+     SSP 
Sbjct: 4166 NKKLPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNSTAK-SSPQ 4224

Query: 267  PIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGW 326
             I  +                           G  +K +ACG + S  +T  G + TFG 
Sbjct: 4225 KIDVL--------------------------CGIGIKKVACGTQFSVALTKDGHVYTFGQ 4258

Query: 327  GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
                   +G   +   P  +  L G+ IE VA G  HT+ ++S+GDVYA+G N  GQLG 
Sbjct: 4259 DRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL 4318

Query: 387  GGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            G       P L+     +NV  + +S G  H+A
Sbjct: 4319 GHTNHVREPTLVTGLQGKNV--RQISAGRCHSA 4349



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 95/174 (54%), Gaps = 5/174 (2%)

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
           + I  G   + VI+  G++   G G YG+ G G ++++ +   ++      I+ V++   
Sbjct: 406 QTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKG 465

Query: 363 ---HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
              HT+  +++G+V+++G   +G+LG G    +  P+L+  P L+      VS G RH+A
Sbjct: 466 SDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCVSAGYRHSA 524

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
            + +DG+++ WG   +G+LG GD   RNIP+ V     V   V+CG  HT+ L+
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG-EVSCGSSHTIALS 577



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 132/298 (44%), Gaps = 35/298 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAG---GRHTLALSDIGQVWGWGYGGEGQLGLGSRI- 259
           GD N  +    +T  P   I  V++      HTLA +  G+V+ WG G  G+LG G+   
Sbjct: 438 GDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSST 497

Query: 260 ----RMVSSP---HPIPCIESSY---------------GKDRSAALSRGSVNSEG-PGFR 296
               +++  P     + C+ + Y               G+     L  G  NS   P   
Sbjct: 498 QKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557

Query: 297 VPGNYVKGIACGGRHSAVITDAGALL-TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
              + V  ++CG  H+  ++  G  + +FG G  G+ G G T+    P  + +L G+ I 
Sbjct: 558 KDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIR 617

Query: 356 GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL-PRLLDAPSLENVHSKSVSCG 414
            V AG   ++ ++S G VYA+G      LG G  +A  L P+L++   L       VS G
Sbjct: 618 KVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE--ELAATRIVDVSIG 673

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVI-DRNIPSQVT-IEGCVPRNVACGWWHTL 470
             H   ++ D +V+ WG N  GQ G G+       P +V+ ++G   + ++ G  H+L
Sbjct: 674 DSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 112/251 (44%), Gaps = 31/251 (12%)

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
           T+ AG   T  +S  G V   G G  G+LGLG       S +     + ++   RS    
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLG------DSNNQSTLKKLTFEPHRSIKKV 460

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN 344
             S  S+G                  H+   T  G + ++G G YG+ G G++  +  P 
Sbjct: 461 SSSKGSDG------------------HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPK 502

Query: 345 CVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSL 403
            +   L G  +  V+AG  H+  ++ DG++Y +G   FG+LG G   +  +P L+    +
Sbjct: 503 LIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK--DI 560

Query: 404 ENVHSKSVSCGARHTAVIADDGK-VFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRN 461
            NV    VSCG+ HT  ++ DG+ V+ +G    G+LG GD      P  +  ++G   R 
Sbjct: 561 SNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK 618

Query: 462 VACGWWHTLLL 472
           V  G   +L L
Sbjct: 619 VCAGSQSSLAL 629



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 86/324 (26%), Positives = 130/324 (40%), Gaps = 67/324 (20%)

Query: 52  GGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVK-AAAGWA 108
           G  G  +A +   ++ +WG  D   LG    ++ K+   P+    P +  +V   +AG+ 
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY---PKLIQGPLQGKVVVCVSAGYR 521

Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRS 168
           H  AVTE GE+YTWG  +       FG L  G     D   R    L + +S   +VS  
Sbjct: 522 HSAAVTEDGELYTWGEGD-------FGRLGHG-----DSNSRNIPTLVKDISNVGEVSCG 569

Query: 169 SGGTSS-GTDGR-----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVR 222
           S  T +   DGR     G G+ G                  GD N    P ++    G+ 
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKL--------------GHGDTNRVYKPKVIEALQGMF 615

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V AG + +LAL+  GQV+ WG G    LG GS       P  I              
Sbjct: 616 IRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE------------- 660

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                         +    +  ++ G  H   ++    +  +G    GQCGQG++   ++
Sbjct: 661 -------------ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPIT 707

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTI 365
            P  VS L GI I+ ++AG  H++
Sbjct: 708 KPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 45.4 bits (106), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 4/89 (4%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           +S   +VY +G N   QL  G  +    P+L  APS  +  ++++  G   T VI+ DG 
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKL--APSFSD--AQTIEAGQYCTFVISTDGS 423

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
           V   G   YG+LGLGD  +++   ++T E
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFE 452


>gi|380018521|ref|XP_003693176.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
           florea]
          Length = 1081

 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 86/249 (34%), Positives = 121/249 (48%), Gaps = 30/249 (12%)

Query: 227 AAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRG 286
           A G  HTLA+++ GQ++ WG   EGQLGL S+  M SSP  +  + +S            
Sbjct: 117 ACGAYHTLAINEWGQLFSWGSNTEGQLGLNSKNFMESSPRMVKTLGTSV----------- 165

Query: 287 SVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGS-TDDELSPNC 345
                          V  IACG +H+  +T+ G L ++G    GQ G G+    E+ P  
Sbjct: 166 ---------------VVQIACGMKHAFALTNNGELYSWGSNSEGQLGLGTDIKYEIKPKF 210

Query: 346 VSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLEN 405
           +S+ +GI I  +A G +H+I IS  G V+ +G N FGQLG    Q   LP  L   +L+N
Sbjct: 211 ISAFIGIPIAFIACGGYHSIAISKSGAVFGWGKNTFGQLGLNDTQDRNLPCQLQ--TLQN 268

Query: 406 VHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVAC 464
                 +CG   +  +  DG VF  G   YGQLG G   +  +P QV  + G     ++C
Sbjct: 269 AKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNSNEILPRQVMELMGSTVTQISC 328

Query: 465 GWWHTLLLA 473
           G  HTL L 
Sbjct: 329 GKRHTLALV 337



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 116/390 (29%), Positives = 172/390 (44%), Gaps = 66/390 (16%)

Query: 60  ISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGG 117
           +   + +  WGST   +LG   +   ++  IP        A I + A G  + V +T+ G
Sbjct: 22  LHKKKDMFCWGSTIHGELGLGGI-EDENILIPRELDFKKAAEIQQIACGENYTVVITQIG 80

Query: 118 EVYTWGWKECVPSGRVFGD--LSTGTGLDKDVFERQS--SFLTEQVSPRSQVSRSSGGTS 173
           E+Y+ G  +    G   G   L    GLD  VF++ +  ++ T  ++   Q+  S G  +
Sbjct: 81  EIYSCGNNDYGQLGHEKGRKRLQLIPGLDAFVFKKAACGAYHTLAINEWGQLF-SWGSNT 139

Query: 174 SGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLV-TLNPGVRIATVAAGGRH 232
            G  G  S             K   ESS          P +V TL   V +  +A G +H
Sbjct: 140 EGQLGLNS-------------KNFMESS----------PRMVKTLGTSV-VVQIACGMKH 175

Query: 233 TLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEG 292
             AL++ G+++ WG   EGQLGLG+ I+    P  I           SA +         
Sbjct: 176 AFALTNNGELYSWGSNSEGQLGLGTDIKYEIKPKFI-----------SAFIG-------- 216

Query: 293 PGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWG--LYGQCGQGSTDDELSPNCVSSLL 350
               +P   +  IACGG HS  I+ +GA+  FGWG   +GQ G   T D   P  + +L 
Sbjct: 217 ----IP---IAFIACGGYHSIAISKSGAV--FGWGKNTFGQLGLNDTQDRNLPCQLQTLQ 267

Query: 351 GIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
             +I   A G   ++ ++ DG V+  G   +GQLG G +  E LPR      L       
Sbjct: 268 NAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNSNEILPR--QVMELMGSTVTQ 325

Query: 411 VSCGARHT-AVIADDGKVFCWGWNKYGQLG 439
           +SCG RHT A++   G+V+ WG    GQLG
Sbjct: 326 ISCGKRHTLALVPSRGRVYAWGLGGAGQLG 355



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 125/273 (45%), Gaps = 35/273 (12%)

Query: 205 DENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSS 264
           DEN+   P  +       I  +A G  +T+ ++ IG+++  G    GQLG          
Sbjct: 46  DENI-LIPRELDFKKAAEIQQIACGENYTVVITQIGEIYSCGNNDYGQLG---------- 94

Query: 265 PHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTF 324
                      G+ R   +         PG  +     K  ACG  H+  I + G L ++
Sbjct: 95  --------HEKGRKRLQLI---------PG--LDAFVFKKAACGAYHTLAINEWGQLFSW 135

Query: 325 GWGLYGQCGQGSTD-DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQ 383
           G    GQ G  S +  E SP  V +L    +  +A G+ H   ++++G++Y++G N  GQ
Sbjct: 136 GSNTEGQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMKHAFALTNNGELYSWGSNSEGQ 195

Query: 384 LGTGGD-QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGD 442
           LG G D + E  P+ + A     +    ++CG  H+  I+  G VF WG N +GQLGL D
Sbjct: 196 LGLGTDIKYEIKPKFISA--FIGIPIAFIACGGYHSIAISKSGAVFGWGKNTFGQLGLND 253

Query: 443 VIDRNIPSQV-TIEGCVPRNVACGWWHTLLLAV 474
             DRN+P Q+ T++       ACG   ++ L V
Sbjct: 254 TQDRNLPCQLQTLQNAKICYAACGEEFSVFLTV 286



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/156 (32%), Positives = 78/156 (50%), Gaps = 10/156 (6%)

Query: 324 FGWG--LYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN 379
           F WG  ++G+ G G  +DE  L P  +      +I+ +A G  +T+ I+  G++Y+ G N
Sbjct: 29  FCWGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQIACGENYTVVITQIGEIYSCGNN 88

Query: 380 QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG 439
            +GQLG      +   RL   P L+    K  +CGA HT  I + G++F WG N  GQLG
Sbjct: 89  DYGQLG----HEKGRKRLQLIPGLDAFVFKKAACGAYHTLAINEWGQLFSWGSNTEGQLG 144

Query: 440 LG--DVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           L   + ++ +     T+   V   +ACG  H   L 
Sbjct: 145 LNSKNFMESSPRMVKTLGTSVVVQIACGMKHAFALT 180


>gi|196004949|ref|XP_002112341.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
 gi|190584382|gb|EDV24451.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
          Length = 794

 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 94/289 (32%), Positives = 144/289 (49%), Gaps = 33/289 (11%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P  V      +I  VAAG  HTLA++D  +++ +G G EG LG G    + + P  I  +
Sbjct: 78  PTTVKALKPEKITHVAAGRFHTLAVTDSNKLYSFGQGSEGALGHGDETDL-NMPTSIESL 136

Query: 272 ESSY------GKDRSAALSRGS------VNSEG-----------PGFRVPGNYVKGIACG 308
           E         G   SAA+++         NSEG           P     G  V  +ACG
Sbjct: 137 EDKDVNIIACGGYHSAAITKNGELYIWGSNSEGQLGLKNDTISYPTMLDLGKSVISVACG 196

Query: 309 GRHSAVITDAGALLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTIC 366
             H+AV+T  G L TFG    G+ G G  +      P  V  + G ++  VA G  HT+ 
Sbjct: 197 YYHTAVVTADGKLYTFGETEGGKLGLGDIEAHKVTKPKVVKGISG-KVVKVACGGNHTVA 255

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAET-LPRLLDAPSLENVHSKSVSCGARHTAVIADDG 425
           +++ G VY FG  Q GQLG G    ++ +P+L++A S   +  K ++CG  HTAV++D G
Sbjct: 256 LTASGQVYTFGSGQNGQLGLGSKIMDSNIPKLVEALSKRKI--KHIACGESHTAVVSDKG 313

Query: 426 KVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC---VPRNVACGWWHTLL 471
           ++F +G  ++G+LG GD    N+   V ++     +  ++ACG  HT++
Sbjct: 314 ELFTFGDGRHGKLGQGDESFSNLFKPVKVQRLKEFIVLHIACGGCHTIV 362



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 64/179 (35%), Positives = 99/179 (55%), Gaps = 6/179 (3%)

Query: 295 FRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQI 354
           F +  + V  IACG  H+ V+T+ G L TFG   +GQ G GS      P  V +L   +I
Sbjct: 30  FWIRSDKVTDIACGDEHTVVVTENGRLFTFGNNEWGQLGIGSNKTRNKPTTVKALKPEKI 89

Query: 355 EGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
             VAAG +HT+ ++    +Y+FG    G LG G +    +P  ++  SLE+     ++CG
Sbjct: 90  THVAAGRFHTLAVTDSNKLYSFGQGSEGALGHGDETDLNMPTSIE--SLEDKDVNIIACG 147

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGL-GDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
             H+A I  +G+++ WG N  GQLGL  D I  + P+ + +   V  +VACG++HT ++
Sbjct: 148 GYHSAAITKNGELYIWGSNSEGQLGLKNDTI--SYPTMLDLGKSVI-SVACGYYHTAVV 203



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 119/253 (47%), Gaps = 34/253 (13%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
           ++  +A G  HT+ +++ G+++ +G    GQLG+GS  +  + P  +  ++         
Sbjct: 36  KVTDIACGDEHTVVVTENGRLFTFGNNEWGQLGIGSN-KTRNKPTTVKALKPE------- 87

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL 341
                               +  +A G  H+  +TD+  L +FG G  G  G G   D  
Sbjct: 88  -------------------KITHVAAGRFHTLAVTDSNKLYSFGQGSEGALGHGDETDLN 128

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
            P  + SL    +  +A G +H+  I+ +G++Y +G N  GQLG   D   + P +LD  
Sbjct: 129 MPTSIESLEDKDVNIIACGGYHSAAITKNGELYIWGSNSEGQLGLKNDTI-SYPTMLDLG 187

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPR- 460
                   SV+CG  HTAV+  DGK++ +G  + G+LGLGD+    +     ++G   + 
Sbjct: 188 K----SVISVACGYYHTAVVTADGKLYTFGETEGGKLGLGDIEAHKVTKPKVVKGISGKV 243

Query: 461 -NVACGWWHTLLL 472
             VACG  HT+ L
Sbjct: 244 VKVACGGNHTVAL 256



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 98/377 (25%), Positives = 151/377 (40%), Gaps = 73/377 (19%)

Query: 100 IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQV 159
           +   A G  H V VTE G ++T+G  E       +G L  G+   ++      +   E++
Sbjct: 37  VTDIACGDEHTVVVTENGRLFTFGNNE-------WGQLGIGSNKTRNKPTTVKALKPEKI 89

Query: 160 SPRSQVSRSSGGTSSGTDGR-----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCL 214
           +    V+     T + TD       G G EG+                 GDE     P  
Sbjct: 90  T---HVAAGRFHTLAVTDSNKLYSFGQGSEGA--------------LGHGDETDLNMPTS 132

Query: 215 VTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES- 273
           +       +  +A GG H+ A++  G+++ WG   EGQLGL +    +S P  +   +S 
Sbjct: 133 IESLEDKDVNIIACGGYHSAAITKNGELYIWGSNSEGQLGLKNDT--ISYPTMLDLGKSV 190

Query: 274 --------------------SYGKDRSAALSRGSVNSEGPGFRVPGNYVKGI-------A 306
                               ++G+     L  G +  E      P   VKGI       A
Sbjct: 191 ISVACGYYHTAVVTADGKLYTFGETEGGKLGLGDI--EAHKVTKP-KVVKGISGKVVKVA 247

Query: 307 CGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDELSPNCVSSLLGIQIEGVAAGLWHTI 365
           CGG H+  +T +G + TFG G  GQ G GS   D   P  V +L   +I+ +A G  HT 
Sbjct: 248 CGGNHTVALTASGQVYTFGSGQNGQLGLGSKIMDSNIPKLVEALSKRKIKHIACGESHTA 307

Query: 366 CISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDG 425
            +S  G+++ FG  + G+LG G +    L + +    L+      ++CG  HT V     
Sbjct: 308 VVSDKGELFTFGDGRHGKLGQGDESFSNLFKPVKVQRLKEFIVLHIACGGCHTIV----- 362

Query: 426 KVFCWGWNKYGQLGLGD 442
                  NK  +L  GD
Sbjct: 363 -----ACNKIDKLANGD 374


>gi|344251059|gb|EGW07163.1| putative E3 ubiquitin-protein ligase HERC1 [Cricetulus griseus]
          Length = 1016

 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 85/244 (34%), Positives = 128/244 (52%), Gaps = 31/244 (12%)

Query: 232 HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
           H++AL++ G+V+ WG G  G+LG G+  R    P  I  ++                   
Sbjct: 248 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQ------------------- 287

Query: 292 GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                  G  V  ++CG +HSAV+T  G L TFG G YG+ G G+T ++  P  V++L G
Sbjct: 288 -------GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 340

Query: 352 IQIEGVAAGLWHTICISSDGD-VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
            QI  VA GL HT+ +S+DG  V+AFG   +G+LG G   A++ P+ +D   L  +  K 
Sbjct: 341 YQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDV--LCGIGIKK 398

Query: 411 VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
           V+CG + +  +  DG V+ +G ++   L  G   + N P Q+  + G V  +VA G  HT
Sbjct: 399 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHT 458

Query: 470 LLLA 473
           L LA
Sbjct: 459 LALA 462



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 66/205 (32%), Positives = 106/205 (51%), Gaps = 6/205 (2%)

Query: 270 CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
           C    +G  R   L+    N   P      +  + + CG   + VI   G +L  G G Y
Sbjct: 152 CDVYLWGAGRHGQLAEAGRNVMVPATAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSY 211

Query: 330 GQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL---WHTICISSDGDVYAFGGNQFGQLGT 386
           G+ GQG++DD      +S+L G  +  +        H++ ++  G+V+++G   +G+LG 
Sbjct: 212 GRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 271

Query: 387 GGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR 446
           G    +  PR ++A   E V    +SCG +H+AV+  DGK+F +G   YG+LGLG+  ++
Sbjct: 272 GNSDRQRRPRQIEALQGEEV--VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK 329

Query: 447 NIPSQVT-IEGCVPRNVACGWWHTL 470
            +P +VT +EG     VACG  HTL
Sbjct: 330 KLPERVTALEGYQIGQVACGLNHTL 354



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 115/401 (28%), Positives = 168/401 (41%), Gaps = 78/401 (19%)

Query: 36  VRLPLTVGS---AWRDVCGGGCGFAMAISD--------SRKLITWGSTDDLGQSYVTSGK 84
           V +P T  S   A + +CG  C F +  +         S   +  G++DDL    V S  
Sbjct: 172 VMVPATAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISAL 231

Query: 85  HGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLD 144
            G +           +V +     H +A+TE GEV++WG  +       +G L  G   D
Sbjct: 232 QGFV--------VTQLVTSCGSDGHSMALTESGEVFSWGDGD-------YGKLGHGNS-D 275

Query: 145 KDVFERQSSFLT-EQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAE 199
           +    RQ   L  E+V   S   + S   +S  DG+    G+G+ G    R+ L      
Sbjct: 276 RQRRPRQIEALQGEEVVQMSCGFKHSAVVTS--DGKLFTFGNGDYG----RLGL------ 323

Query: 200 SSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS-DIGQVWGWGYGGEGQLGLGSR 258
               G+ +    P  VT   G +I  VA G  HTLA+S D   VW +G G  G+LGLG+ 
Sbjct: 324 ----GNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 379

Query: 259 IRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDA 318
               SSP  +  +                           G  +K +ACG + S  +T  
Sbjct: 380 TAK-SSPQKVDVL--------------------------CGIGIKKVACGTQFSVALTKD 412

Query: 319 GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           G + TFG        +G   +   P  +  L G+ IE VA G  HT+ ++S GDVYA+G 
Sbjct: 413 GHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGS 472

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
           N  GQLG G       P L+     +N+  + +S G  H+A
Sbjct: 473 NSEGQLGLGHTNHVREPTLVTVLQGKNI--RQISAGRCHSA 511


>gi|224075844|ref|XP_002304793.1| predicted protein [Populus trichocarpa]
 gi|222842225|gb|EEE79772.1| predicted protein [Populus trichocarpa]
          Length = 1099

 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 70/171 (40%), Positives = 100/171 (58%), Gaps = 4/171 (2%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ IACG +H+A++T  G + ++G  L G+ G G   D   P  V  L    +E VA G 
Sbjct: 307 VQAIACGRQHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKFVDGLKNFNVELVACGE 366

Query: 362 WHTICISSDGDVYAFGGN--QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
           +H+  ++  GD+Y +GGN   FG LG G +  + +PR LD P LE +H  SVSCG  HTA
Sbjct: 367 YHSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQWVPRKLDGP-LEGIHVSSVSCGPWHTA 425

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
           V+   G++F +G   +G LG GD I  +IP +V +++G      ACG WHT
Sbjct: 426 VVTSAGQLFTFGDGTFGVLGHGDRISVSIPREVESLKGLRTMRAACGVWHT 476



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 119/260 (45%), Gaps = 44/260 (16%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G+ +++V+ G  HT  ++  GQ++ +G G  G LG G RI  VS P  +  ++       
Sbjct: 411 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI-SVSIPREVESLK------- 462

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITD------------AGALLTFGWG 327
                         G R         ACG  H+A + +            +G L T+G G
Sbjct: 463 --------------GLRT-----MRAACGVWHTAAVVEIMVGSSNSSNCSSGKLFTWGDG 503

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG 387
              + G G  +  L P CV++L+      VA G   T  +++ G VY  G   +GQLG  
Sbjct: 504 DKCRLGHGDKEARLVPTCVATLVEPNFCQVACGHSLTAALTTTGQVYTMGSPVYGQLG-- 561

Query: 388 GDQAE-TLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR 446
             QA+  LP  ++   ++N   + ++CGA H AV+    +V+ WG    G+LG GD  DR
Sbjct: 562 NPQADGMLPTRVEGKLMKNF-VEELACGAYHVAVLTSRTEVYTWGKGANGRLGHGDADDR 620

Query: 447 NIPSQV-TIEGCVPRNVACG 465
           N PS V  ++    + + CG
Sbjct: 621 NSPSVVEALKDKQVKGIVCG 640



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 61/192 (31%), Positives = 93/192 (48%), Gaps = 21/192 (10%)

Query: 297 VPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG 356
           + G +V  ++CG  H+AV+T AG L TFG G +G  G G       P  V SL G++   
Sbjct: 409 LEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSIPREVESLKGLRTMR 468

Query: 357 VAAGLWHTICI------------SSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLE 404
            A G+WHT  +             S G ++ +G     +LG G  +A  +P  +   +L 
Sbjct: 469 AACGVWHTAAVVEIMVGSSNSSNCSSGKLFTWGDGDKCRLGHGDKEARLVPTCV--ATLV 526

Query: 405 NVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRN--- 461
             +   V+CG   TA +   G+V+  G   YGQLG     D  +P++V  EG + +N   
Sbjct: 527 EPNFCQVACGHSLTAALTTTGQVYTMGSPVYGQLG-NPQADGMLPTRV--EGKLMKNFVE 583

Query: 462 -VACGWWHTLLL 472
            +ACG +H  +L
Sbjct: 584 ELACGAYHVAVL 595


>gi|357520083|ref|XP_003630330.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355524352|gb|AET04806.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 279

 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 128/253 (50%), Gaps = 30/253 (11%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
            +  ++AG  HT+AL     V  WG G +GQLG G      +    +P   S++      
Sbjct: 13  HVLLISAGASHTVALLTGNVVCSWGRGEDGQLGHGD-----TDDRLLPTKLSAF------ 61

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA-LLTFGWGLYGQCGQGSTDDE 340
                            G  +  + CG  ++   + +G  + ++GWG +G+ G G   D 
Sbjct: 62  ----------------DGQDIVSVTCGADYTVARSKSGKDVYSWGWGDFGRLGHGDPSDL 105

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
             P+ + +L G++I+ ++ G  H + ++ +  V ++G NQ G+LG G  +   +P+ + A
Sbjct: 106 FIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGELGLGTTKDSHVPQKILA 165

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPR 460
              E +  K V+ GA H+  I +DG ++ WGW +YG LGLGD  DR IP +V I+G    
Sbjct: 166 --FEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLGDTNDRLIPEKVNIDGDKIV 223

Query: 461 NVACGWWHTLLLA 473
            V+CGW HT+ ++
Sbjct: 224 MVSCGWRHTISIS 236



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 81/250 (32%), Positives = 123/250 (49%), Gaps = 31/250 (12%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQ-VWGWGYGGEGQLGLGSRIRMV 262
           GD +    P  ++   G  I +V  G  +T+A S  G+ V+ WG+G  G+LG G    + 
Sbjct: 47  GDTDDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGWGDFGRLGHGDPSDLF 106

Query: 263 SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL 322
             PHPI  ++                     G R+     K I+CG  H   +T    +L
Sbjct: 107 I-PHPIRALQ---------------------GLRI-----KQISCGDCHCLAVTMENKVL 139

Query: 323 TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFG 382
           ++G    G+ G G+T D   P  + +  GI+I+ VAAG  H++ I+ DGD+Y +G  ++G
Sbjct: 140 SWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYG 199

Query: 383 QLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGD 442
            LG G      +P  ++    + V    VSCG RHT  I+  G ++  GW+KYGQLG GD
Sbjct: 200 NLGLGDTNDRLIPEKVNIDGDKIV---MVSCGWRHTISISSSGGLYTHGWSKYGQLGHGD 256

Query: 443 VIDRNIPSQV 452
             D  +P +V
Sbjct: 257 FEDCLVPRKV 266



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 115/272 (42%), Gaps = 55/272 (20%)

Query: 85  HGEIPEPFPLPTEAS------IVKAAAGWAHCVAVTEGG-EVYTWGWKECVPSGRVFGDL 137
           HG+  +   LPT+ S      IV    G  + VA ++ G +VY+WGW +       FG L
Sbjct: 46  HGDTDDRL-LPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGWGD-------FGRL 97

Query: 138 STGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQT 197
             G G   D+F        + +  + Q+S       + T          + + +S  +  
Sbjct: 98  --GHGDPSDLFIPHPIRALQGLRIK-QISCGDCHCLAVT---------MENKVLSWGRNQ 145

Query: 198 AESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS 257
                 G    S  P  +    G+RI  VAAG  H++A+++ G ++GWG+G  G LGLG 
Sbjct: 146 NGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLG- 204

Query: 258 RIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITD 317
                               D +  L    VN       + G+ +  ++CG RH+  I+ 
Sbjct: 205 --------------------DTNDRLIPEKVN-------IDGDKIVMVSCGWRHTISISS 237

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSL 349
           +G L T GW  YGQ G G  +D L P  V +L
Sbjct: 238 SGGLYTHGWSKYGQLGHGDFEDCLVPRKVQAL 269



 Score = 45.4 bits (106), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 68/145 (46%), Gaps = 14/145 (9%)

Query: 9   KMERVVFMWGYLP-GALPQRSPILSPLVVRLPLTV--GSAWRDVCGGGCGFAMAISDSRK 65
           K  + V+ WG+   G L    P  S L +  P+    G   + +  G C   +A++   K
Sbjct: 81  KSGKDVYSWGWGDFGRLGHGDP--SDLFIPHPIRALQGLRIKQISCGDC-HCLAVTMENK 137

Query: 66  LITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWK 125
           +++WG   + G+  + + K   +P+         I   AAG  H VA+TE G++Y WGW 
Sbjct: 138 VLSWGRNQN-GELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGW- 195

Query: 126 ECVPSGRVFGDLSTGTGLDKDVFER 150
                GR +G+L  G   D+ + E+
Sbjct: 196 -----GR-YGNLGLGDTNDRLIPEK 214


>gi|218781264|ref|YP_002432582.1| chromosome condensation regulator RCC1 [Desulfatibacillum
            alkenivorans AK-01]
 gi|218762648|gb|ACL05114.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
            alkenivorans AK-01]
          Length = 1525

 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 82/252 (32%), Positives = 125/252 (49%), Gaps = 37/252 (14%)

Query: 224  ATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR--IRMVSSPHPIPCIESSYGKDRSA 281
            A +AAG  H LAL+  G VW WGY  +GQLGLGS       + P  I  I +        
Sbjct: 1036 AKIAAGDNHALALAPDGSVWSWGYNSDGQLGLGSSGTYSTKNRPQKINAISN-------- 1087

Query: 282  ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL 341
                                V  IACGG HS  +   G+L ++G+  YGQ G G    + 
Sbjct: 1088 --------------------VAAIACGGSHSLAVARDGSLWSWGYNYYGQLGLGDNYSKT 1127

Query: 342  SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
            +P  V+++    +  +AAG ++++ ++ DG V+++G N  GQLG G ++    P+ ++  
Sbjct: 1128 TPQKVNAI--SNVAAIAAGEYYSLALTRDGSVWSWGDNSDGQLGLGDNEDRNTPQKVEV- 1184

Query: 402  SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRN 461
             L NV   +++ G  H+  +  DG V+ WG N  GQLGL D  DRN P  VT    + + 
Sbjct: 1185 -LSNV--AAIAAGEDHSLALTRDGSVWSWGRNSRGQLGLDDNDDRNTPQPVTTISNI-KA 1240

Query: 462  VACGWWHTLLLA 473
            +A G  H+  ++
Sbjct: 1241 IAAGNSHSFAIS 1252



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 72/241 (29%), Positives = 121/241 (50%), Gaps = 38/241 (15%)

Query: 217 LNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYG 276
           +N    +A +A GG H+LAL+  G  W WGY   GQLGLG  +   ++P  +  + +   
Sbjct: 593 INAISNVAAIACGGSHSLALARDGSFWSWGYNYYGQLGLGDNVSK-TTPRKVNALSN--- 648

Query: 277 KDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGS 336
                                    V  +A G RHS  +T  G+L ++G   YGQ G G 
Sbjct: 649 -------------------------VVAMAAGDRHSLALTLDGSLWSWGDNTYGQLGLGD 683

Query: 337 TDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPR 396
            D   +P  V+++    +  +AAG  H++ ++ DG V+++G N  GQLG G +     P+
Sbjct: 684 NDHRNTPRKVNAI--SNVVAIAAGYRHSLALTRDGSVWSWGNNTRGQLGLGDNDDRNTPQ 741

Query: 397 LLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL---GDVIDRNIPSQVT 453
            +   ++ N+  K+++ G  ++  I+++G V+ WG+N  GQLG+   G + D N P +V 
Sbjct: 742 PV--TTISNI--KAIAVGNNYSIAISEEGLVWAWGYNCSGQLGIGTHGSLADENTPQKVI 797

Query: 454 I 454
           +
Sbjct: 798 V 798



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 81/230 (35%), Positives = 118/230 (51%), Gaps = 32/230 (13%)

Query: 224 ATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAAL 283
           A++AAGG H LAL+  G VW WG    GQLGLG+     +   P           +  A+
Sbjct: 547 ASIAAGGGHALALASDGSVWSWGRNSVGQLGLGTGGTYSTENRP----------QKINAI 596

Query: 284 SRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
           S                 V  IACGG HS  +   G+  ++G+  YGQ G G    + +P
Sbjct: 597 SN----------------VAAIACGGSHSLALARDGSFWSWGYNYYGQLGLGDNVSKTTP 640

Query: 344 NCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSL 403
             V++L    +  +AAG  H++ ++ DG ++++G N +GQLG G +     PR ++A  +
Sbjct: 641 RKVNAL--SNVVAMAAGDRHSLALTLDGSLWSWGDNTYGQLGLGDNDHRNTPRKVNA--I 696

Query: 404 ENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT 453
            NV   +++ G RH+  +  DG V+ WG N  GQLGLGD  DRN P  VT
Sbjct: 697 SNV--VAIAAGYRHSLALTRDGSVWSWGNNTRGQLGLGDNDDRNTPQPVT 744



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 100/351 (28%), Positives = 155/351 (44%), Gaps = 60/351 (17%)

Query: 91  PFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFER 150
           P   P  ++IV  AAG    +A+   G ++ WG       G  +G L  G   ++     
Sbjct: 110 PEQAPVVSNIVSVAAGRLFSLALASDGSLWAWG-------GNYYGQLGMGDNDNR----- 157

Query: 151 QSSFLTEQVSP-RSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLS 209
               LT   +P  S V+  +GG         SGE  +  R         +   +GD   +
Sbjct: 158 ----LTPSKTPGLSDVAAIAGGDYHALAATQSGEVWAMGR-----NDHGQLGFTGDH--A 206

Query: 210 AFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP 269
             P  V     V+  +VAAG   +LAL + G VW WG     QLG G     V++P PI 
Sbjct: 207 DAPVQVAGLSNVK--SVAAGEFFSLALKNDGTVWAWGNNESAQLGTGIAGEAVATPAPIA 264

Query: 270 CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
            + +                            +  IA G RH+  + + G++  +G    
Sbjct: 265 VLSN----------------------------ITAIAAGRRHAMALAEDGSVWAWGANGS 296

Query: 330 GQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD 389
           GQ G G  +   +P  VSSL    +  +A+G +H++ ++SDG ++A+G N  G+LGT   
Sbjct: 297 GQLGFGDFETPKAPGRVSSL--ADVTAIASGWFHSLALTSDGVLWAWGNNGDGRLGTDAT 354

Query: 390 QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL 440
             ++LP  + + S    ++ S + G RH+  IA DG V+ WG N YGQLG+
Sbjct: 355 SDQSLPAQVSSIS----NAVSFAGGQRHSLAIAADGSVWSWGGNAYGQLGV 401



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 125/259 (48%), Gaps = 39/259 (15%)

Query: 217  LNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYG 276
            +N    +A +A GG H+LA++  G +W WGY   GQLGLG      ++P  +  I +   
Sbjct: 1082 INAISNVAAIACGGSHSLAVARDGSLWSWGYNYYGQLGLGDNYSK-TTPQKVNAISN--- 1137

Query: 277  KDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGS 336
                                     V  IA G  +S  +T  G++ ++G    GQ G G 
Sbjct: 1138 -------------------------VAAIAAGEYYSLALTRDGSVWSWGDNSDGQLGLGD 1172

Query: 337  TDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPR 396
             +D  +P  V  L    +  +AAG  H++ ++ DG V+++G N  GQLG   +     P+
Sbjct: 1173 NEDRNTPQKVEVL--SNVAAIAAGEDHSLALTRDGSVWSWGRNSRGQLGLDDNDDRNTPQ 1230

Query: 397  LLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL---GDVIDRNIPSQVT 453
             +   ++ N+  K+++ G  H+  I+++G  + WG+N  GQLG+   G + + N P +V 
Sbjct: 1231 PV--TTISNI--KAIAAGNSHSFAISEEGLAWAWGYNYDGQLGIGTSGSLANENTPQKVK 1286

Query: 454  IEGCVPRNVACGWWHTLLL 472
            +   V   ++ G +H+L L
Sbjct: 1287 VISNV-VGLSGGNYHSLAL 1304



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 83/270 (30%), Positives = 126/270 (46%), Gaps = 32/270 (11%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES------------ 273
           VA+   H+LAL   G VW WG     QLGLG  I  ++ P   P + +            
Sbjct: 72  VASRLDHSLALKGDGTVWVWGRNDYNQLGLGDDINRLA-PEQAPVVSNIVSVAAGRLFSL 130

Query: 274 ---------SYGKDRSAALSRGSVNSEGPGFRVPG-NYVKGIACGGRHSAVITDAGALLT 323
                    ++G +    L  G  ++     + PG + V  IA G  H+   T +G +  
Sbjct: 131 ALASDGSLWAWGGNYYGQLGMGDNDNRLTPSKTPGLSDVAAIAGGDYHALAATQSGEVWA 190

Query: 324 FGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQ 383
            G   +GQ G  + D   +P  V+ L    ++ VAAG + ++ + +DG V+A+G N+  Q
Sbjct: 191 MGRNDHGQLGF-TGDHADAPVQVAGL--SNVKSVAAGEFFSLALKNDGTVWAWGNNESAQ 247

Query: 384 LGTG-GDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGD 442
           LGTG   +A   P    AP     +  +++ G RH   +A+DG V+ WG N  GQLG GD
Sbjct: 248 LGTGIAGEAVATP----APIAVLSNITAIAAGRRHAMALAEDGSVWAWGANGSGQLGFGD 303

Query: 443 VIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
                 P +V+    V   +A GW+H+L L
Sbjct: 304 FETPKAPGRVSSLADVTA-IASGWFHSLAL 332



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 123/476 (25%), Positives = 197/476 (41%), Gaps = 95/476 (19%)

Query: 56  FAMAISDSRKLITWGSTDDLGQSYVTSGKHGE-IPEPFPLPTEASIVKAAAGWAHCVAVT 114
           F++A+ +   +  WG+ +    + + +G  GE +  P P+   ++I   AAG  H +A+ 
Sbjct: 227 FSLALKNDGTVWAWGNNE---SAQLGTGIAGEAVATPAPIAVLSNITAIAAGRRHAMALA 283

Query: 115 EGGEVYTWGWKECVPSGRV-FGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTS 173
           E G V+ WG      SG++ FGD  T           + S L +  +  S    S   TS
Sbjct: 284 EDGSVWAWG---ANGSGQLGFGDFETPKA------PGRVSSLADVTAIASGWFHSLALTS 334

Query: 174 SGT----DGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAG 229
            G        G G  G+               ++ D++L A    ++        + A G
Sbjct: 335 DGVLWAWGNNGDGRLGTD--------------ATSDQSLPAQVSSIS-----NAVSFAGG 375

Query: 230 GRHTLALSDIGQVWGWGYGGEGQLGLGSRI--RMVSSPHPI------------------- 268
            RH+LA++  G VW WG    GQLG+ S     +++  H +                   
Sbjct: 376 QRHSLAIAADGSVWSWGGNAYGQLGVESLTPASVLTPVHTLYSGEDFHLFYDTDGDGAAN 435

Query: 269 ------------------PCIESSYGKDRSAALS-------RGSVNSEGPGFRVPGNYVK 303
                             PC+ +   +D     +        G      PGF   GN   
Sbjct: 436 IWDDDDDGDGFLDESDNCPCVSNPGQEDEDGDGTGDFCDGCPGDFFKIQPGFSGCGNPNP 495

Query: 304 GIACGGRHSAVITDAGALLTFG--WGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
            +A GG  S  +   G++ ++G         G G  DD  +P  V +L       +AAG 
Sbjct: 496 MVAAGGGFSLALKTDGSVWSWGNNGSGQLGLGLGENDDVFTPTNVDAL--PLAASIAAGG 553

Query: 362 WHTICISSDGDVYAFGGNQFGQLGTGGD---QAETLPRLLDAPSLENVHSKSVSCGARHT 418
            H + ++SDG V+++G N  GQLG G       E  P+ ++A  + NV   +++CG  H+
Sbjct: 554 GHALALASDGSVWSWGRNSVGQLGLGTGGTYSTENRPQKINA--ISNV--AAIACGGSHS 609

Query: 419 AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAV 474
             +A DG  + WG+N YGQLGLGD + +  P +V     V   +A G  H+L L +
Sbjct: 610 LALARDGSFWSWGYNYYGQLGLGDNVSKTTPRKVNALSNVVA-MAAGDRHSLALTL 664



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 94/380 (24%), Positives = 152/380 (40%), Gaps = 69/380 (18%)

Query: 26  QRSPILSPLVVR-LPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGK 84
           +   + +P  V  LPL    A       G G A+A++    + +WG          T G 
Sbjct: 530 ENDDVFTPTNVDALPLAASIA------AGGGHALALASDGSVWSWGRNSVGQLGLGTGGT 583

Query: 85  HGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLD 144
           +     P  +   +++   A G +H +A+   G  ++WG+         +G L  G  + 
Sbjct: 584 YSTENRPQKINAISNVAAIACGGSHSLALARDGSFWSWGYN-------YYGQLGLGDNVS 636

Query: 145 KDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSG 204
           K    R+ + L+  V+  +    S   T  G+               S    T      G
Sbjct: 637 K-TTPRKVNALSNVVAMAAGDRHSLALTLDGS-------------LWSWGDNTYGQLGLG 682

Query: 205 DENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSS 264
           D +    P  V  N    +  +AAG RH+LAL+  G VW WG    GQLGLG      ++
Sbjct: 683 DNDHRNTPRKV--NAISNVVAIAAGYRHSLALTRDGSVWSWGNNTRGQLGLGDNDDR-NT 739

Query: 265 PHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTF 324
           P P+  I +                            +K IA G  +S  I++ G +  +
Sbjct: 740 PQPVTTISN----------------------------IKAIAVGNNYSIAISEEGLVWAW 771

Query: 325 GWGLYGQCG---QGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
           G+   GQ G    GS  DE +P  V  ++   + G++AG  H+I ++ DG ++A+G N+ 
Sbjct: 772 GYNCSGQLGIGTHGSLADENTPQKV--IVISNVVGLSAGSSHSIALTEDGALWAWGNNEA 829

Query: 382 GQLGTGGDQAETLPRLLDAP 401
           GQ+      AE     +D P
Sbjct: 830 GQIA-----AEEAIEYIDNP 844



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 84/352 (23%), Positives = 141/352 (40%), Gaps = 78/352 (22%)

Query: 53   GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
            G   A+A++    + +WG   D      +SG +     P  +   +++   A G +H +A
Sbjct: 1041 GDNHALALAPDGSVWSWGYNSDGQLGLGSSGTYSTKNRPQKINAISNVAAIACGGSHSLA 1100

Query: 113  VTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLT-------EQVS---PR 162
            V   G +++WG+         +G L  G    K   ++ ++          E  S    R
Sbjct: 1101 VARDGSLWSWGYN-------YYGQLGLGDNYSKTTPQKVNAISNVAAIAAGEYYSLALTR 1153

Query: 163  SQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVR 222
                 S G  S G  G G  E+ +  +++ +                             
Sbjct: 1154 DGSVWSWGDNSDGQLGLGDNEDRNTPQKVEVLS--------------------------N 1187

Query: 223  IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
            +A +AAG  H+LAL+  G VW WG    GQLGL       ++P P+  I +         
Sbjct: 1188 VAAIAAGEDHSLALTRDGSVWSWGRNSRGQLGLDDNDDR-NTPQPVTTISN--------- 1237

Query: 283  LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCG---QGSTDD 339
                               +K IA G  HS  I++ G    +G+   GQ G    GS  +
Sbjct: 1238 -------------------IKAIAAGNSHSFAISEEGLAWAWGYNYDGQLGIGTSGSLAN 1278

Query: 340  ELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLG-TGGDQ 390
            E +P  V  +    + G++ G +H++ ++ DG ++A+G N  GQ+G TGGD+
Sbjct: 1279 ENTPQKVKVI--SNVVGLSGGNYHSLALTEDGALWAWGDNDDGQIGSTGGDR 1328



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 109/422 (25%), Positives = 182/422 (43%), Gaps = 76/422 (18%)

Query: 49  VCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPF---PLPTEASIVKAAA 105
           +   G GF++A+     + +WG+ +  GQ  +  G++ ++  P     LP  ASI   AA
Sbjct: 496 MVAAGGGFSLALKTDGSVWSWGN-NGSGQLGLGLGENDDVFTPTNVDALPLAASI---AA 551

Query: 106 GWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQV 165
           G  H +A+   G V++WG              S G           +    ++++  S V
Sbjct: 552 GGGHALALASDGSVWSWGRN------------SVGQLGLGTGGTYSTENRPQKINAISNV 599

Query: 166 SR-SSGGTSS---GTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGV 221
           +  + GG+ S     DG       +   ++ L    ++++      ++A   +V +  G 
Sbjct: 600 AAIACGGSHSLALARDGSFWSWGYNYYGQLGLGDNVSKTTP---RKVNALSNVVAMAAGD 656

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
           R         H+LAL+  G +W WG    GQLGLG      ++P  +  I +        
Sbjct: 657 R---------HSLALTLDGSLWSWGDNTYGQLGLGDNDHR-NTPRKVNAISN-------- 698

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL 341
                               V  IA G RHS  +T  G++ ++G    GQ G G  DD  
Sbjct: 699 --------------------VVAIAAGYRHSLALTRDGSVWSWGNNTRGQLGLGDNDDRN 738

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           +P  V+++    I+ +A G  ++I IS +G V+A+G N  GQLG G     T   L D  
Sbjct: 739 TPQPVTTI--SNIKAIAVGNNYSIAISEEGLVWAWGYNCSGQLGIG-----THGSLADEN 791

Query: 402 SLENVHSKS----VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR-NIPSQVTIEG 456
           + + V   S    +S G+ H+  + +DG ++ WG N+ GQ+   + I+  + P QV   G
Sbjct: 792 TPQKVIVISNVVGLSAGSSHSIALTEDGALWAWGNNEAGQIAAEEAIEYIDNPVQVFQSG 851

Query: 457 CV 458
            V
Sbjct: 852 EV 853



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 78/275 (28%), Positives = 131/275 (47%), Gaps = 30/275 (10%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLG---SRIRMVSSP------------- 265
            I +VAAG   +LAL+  G +W WG    GQLG+G   +R+    +P             
Sbjct: 118 NIVSVAAGRLFSLALASDGSLWAWGGNYYGQLGMGDNDNRLTPSKTPGLSDVAAIAGGDY 177

Query: 266 HPIPCIES----SYGKDRSAALSRGSVNSEGPGFRVPG-NYVKGIACGGRHSAVITDAGA 320
           H +   +S    + G++    L     +++ P  +V G + VK +A G   S  + + G 
Sbjct: 178 HALAATQSGEVWAMGRNDHGQLGFTGDHADAP-VQVAGLSNVKSVAAGEFFSLALKNDGT 236

Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
           +  +G     Q G G   + ++     ++L   I  +AAG  H + ++ DG V+A+G N 
Sbjct: 237 VWAWGNNESAQLGTGIAGEAVATPAPIAVLS-NITAIAAGRRHAMALAEDGSVWAWGANG 295

Query: 381 FGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL 440
            GQLG G  +    P  +   SL +V   +++ G  H+  +  DG ++ WG N  G+LG 
Sbjct: 296 SGQLGFGDFETPKAPGRV--SSLADV--TAIASGWFHSLALTSDGVLWAWGNNGDGRLGT 351

Query: 441 GDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLAV 474
               D+++P+QV +I   V  + A G  H+L +A 
Sbjct: 352 DATSDQSLPAQVSSISNAV--SFAGGQRHSLAIAA 384



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 61/185 (32%), Positives = 95/185 (51%), Gaps = 12/185 (6%)

Query: 293  PGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD--DELSPNCVSSLL 350
            PGF   GN    +A GG  S  +   G+L ++G    GQ G G     +  +P  V +L 
Sbjct: 974  PGFSGCGNPNPMVAAGGNFSLALKTDGSLWSWGDNGTGQLGLGLGQSVNVFTPTKVDAL- 1032

Query: 351  GIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD---QAETLPRLLDAPSLENVH 407
                  +AAG  H + ++ DG V+++G N  GQLG G       +  P+ ++A  + NV 
Sbjct: 1033 -PPAAKIAAGDNHALALAPDGSVWSWGYNSDGQLGLGSSGTYSTKNRPQKINA--ISNV- 1088

Query: 408  SKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWW 467
              +++CG  H+  +A DG ++ WG+N YGQLGLGD   +  P +V     V   +A G +
Sbjct: 1089 -AAIACGGSHSLAVARDGSLWSWGYNYYGQLGLGDNYSKTTPQKVNAISNVAA-IAAGEY 1146

Query: 468  HTLLL 472
            ++L L
Sbjct: 1147 YSLAL 1151



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 59/181 (32%), Positives = 86/181 (47%), Gaps = 10/181 (5%)

Query: 293 PGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGI 352
           PGF   GN    +A    HS  +   G +  +G   Y Q G G   + L+P     +   
Sbjct: 60  PGFTGCGNAEPMVASRLDHSLALKGDGTVWVWGRNDYNQLGLGDDINRLAPEQAPVV--S 117

Query: 353 QIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVS 412
            I  VAAG   ++ ++SDG ++A+GGN +GQLG G +     P     P L +V   +++
Sbjct: 118 NIVSVAAGRLFSLALASDGSLWAWGGNYYGQLGMGDNDNRLTPS--KTPGLSDV--AAIA 173

Query: 413 CGARHTAVIADDGKVFCWGWNKYGQLGL-GDVIDRNIPSQVTIEGCVPRNVACGWWHTLL 471
            G  H       G+V+  G N +GQLG  GD  D   P QV     V ++VA G + +L 
Sbjct: 174 GGDYHALAATQSGEVWAMGRNDHGQLGFTGDHAD--APVQVAGLSNV-KSVAAGEFFSLA 230

Query: 472 L 472
           L
Sbjct: 231 L 231


>gi|21741206|emb|CAD41017.1| OSJNBb0086G13.15 [Oryza sativa Japonica Group]
          Length = 256

 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 76/237 (32%), Positives = 121/237 (51%), Gaps = 28/237 (11%)

Query: 218 NPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
           +P   +  V+AG  H++AL     +  WG G +GQLG G                    +
Sbjct: 19  DPPPAVVLVSAGASHSVALLAGNVLCSWGRGEDGQLGHGD------------------AE 60

Query: 278 DRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVIT-DAGALLTFGWGLYGQCGQGS 336
           DR         ++  PG       +  + CG  H+   + D   + ++GWG +G+ G G+
Sbjct: 61  DRLVPTVLSGFDAAAPG-------ITSVICGADHTTAYSEDEQQVYSWGWGDFGRLGHGN 113

Query: 337 TDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPR 396
           + D  +P  V +L GI+I+ +A G  H + ++  G+V ++G NQ GQLG G  +   LP+
Sbjct: 114 SSDVFTPQPVKALQGIKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQ 173

Query: 397 LLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT 453
            +   S E V  K ++ GA HTA + +DG ++ WGW +YG LGLGD  DR +P +V+
Sbjct: 174 KIQ--SFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPEKVS 228



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 60/188 (31%), Positives = 90/188 (47%), Gaps = 30/188 (15%)

Query: 223 IATVAAGGRHTLALS-DIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
           I +V  G  HT A S D  QV+ WG+G  G+LG G+    V +P P+  ++         
Sbjct: 78  ITSVICGADHTTAYSEDEQQVYSWGWGDFGRLGHGNSSD-VFTPQPVKALQ--------- 127

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL 341
                            G  +K IACG  H   +T AG + ++G    GQ G G+T+D L
Sbjct: 128 -----------------GIKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSL 170

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
            P  + S  G+ ++ +AAG  HT  ++ DGD+Y +G  ++G LG G      +P      
Sbjct: 171 LPQKIQSFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPE--KVS 228

Query: 402 SLENVHSK 409
           S+EN+  K
Sbjct: 229 SVENMFLK 236



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 55/169 (32%), Positives = 80/169 (47%), Gaps = 6/169 (3%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ--IEGVAAGLW 362
           ++ G  HS  +     L ++G G  GQ G G  +D L P  +S        I  V  G  
Sbjct: 27  VSAGASHSVALLAGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAAAPGITSVICGAD 86

Query: 363 HTICISSD-GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
           HT   S D   VY++G   FG+LG G       P+ + A  L+ +  K ++CG  H   +
Sbjct: 87  HTTAYSEDEQQVYSWGWGDFGRLGHGNSSDVFTPQPVKA--LQGIKIKQIACGDSHCLAV 144

Query: 422 ADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
              G+V  WG N+ GQLGLG   D  +P ++ + EG   + +A G  HT
Sbjct: 145 TMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQSFEGVCVKMIAAGAEHT 193



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 71/267 (26%), Positives = 109/267 (40%), Gaps = 61/267 (22%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAA------- 105
           G   ++A+     L +WG  +D GQ       HG+  +   +PT  S   AAA       
Sbjct: 30  GASHSVALLAGNVLCSWGRGED-GQL-----GHGDAEDRL-VPTVLSGFDAAAPGITSVI 82

Query: 106 -GWAHCVAVTEG-GEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRS 163
            G  H  A +E   +VY+WGW +       FG L  G G   DVF  Q     + +    
Sbjct: 83  CGADHTTAYSEDEQQVYSWGWGD-------FGRL--GHGNSSDVFTPQPVKALQGI---- 129

Query: 164 QVSRSSGGTSSGTDGRGSGEEGS--KRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGV 221
           ++ + + G S       +GE  S  + +   L   T E S          P  +    GV
Sbjct: 130 KIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDS--------LLPQKIQSFEGV 181

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR-IRMVSSPHPIPCIESSYGKDRS 280
            +  +AAG  HT A+++ G ++GWG+G  G LGLG R  R+V  P  +  +E+ +     
Sbjct: 182 CVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLV--PEKVSSVENMF----- 234

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIAC 307
                          ++P  Y  G+ C
Sbjct: 235 --------------LKIPSLYATGLYC 247


>gi|281209109|gb|EFA83284.1| regulator of chromosome condensation domain-containing protein
           [Polysphondylium pallidum PN500]
          Length = 853

 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 132/490 (26%), Positives = 207/490 (42%), Gaps = 90/490 (18%)

Query: 31  LSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPE 90
           L P V++L    G   + +  G    ++A+++   + +WG            GK GE+  
Sbjct: 23  LDPAVIQL--LKGKRIKQIACGE-AHSLAVTEFGDVYSWGR-----------GKEGELGH 68

Query: 91  PFPLPT----------EASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRV----FGD 136
           P    T             IVK A G  H +A+T+ G+VY WG    + + +      G 
Sbjct: 69  PQKAMTAPPALIKALEHERIVKVACGNYHSLALTDTGKVYQWGQLHEIDATKSGVKSQGG 128

Query: 137 LSTGTGLD----KDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRIS 192
           L   TG+     K      S +L  + +   + S SS          G   +  +     
Sbjct: 129 LVEMTGIKSFASKVADHSLSMYLNGEKAAYDEESASSSVLQDNPTANGLVTDDQEEEEEF 188

Query: 193 L------AKQTAESSSSG-------DENLSAFPCLVTL-NPGVRIATVAAGGRHTLALSD 238
           L       +Q  +   SG       D+N    P LV   +  ++I  ++AG  ++ A++ 
Sbjct: 189 LPEAIVDTQQEQQPEKSGSKVGEIVDKN-QMTPVLVDFGSKSIKIVDISAGWAYSAAVTS 247

Query: 239 IGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVP 298
            G V+ WG+  +GQLGLG R       H  P +  S        LS  S           
Sbjct: 248 TGNVYTWGFNEKGQLGLGDRWY-----HGNPRVIRS--------LSNKS----------- 283

Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ--IEG 356
              +  IACG +H A I+ +G L T+G G++GQ G G     L P  V      Q  I  
Sbjct: 284 ---IVNIACGRQHMAAISKSGDLYTWGLGVFGQLGHGKLKSLLHPKKVLYFEQQQKKIVQ 340

Query: 357 VAAGLWHTICISSDGDVYAFGGNQFGQLG-----------TGGDQAETLPRLL--DAPSL 403
           VA G   T+ +S +G++++FG  ++GQLG             GD+ + L   L     +L
Sbjct: 341 VATGANFTMAVSENGELFSFGHGEYGQLGATEDTQYMDWNNNGDRDDHLKYSLPKQVKAL 400

Query: 404 ENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNV 462
           E+V  + V+CG  HT  +  D  V+ WGW   G LG GD   + +P +V ++ G    +V
Sbjct: 401 ESVKVRKVACGHLHTIAVTTDNDVYTWGWGSSGCLGFGDRKFQLVPQRVPSLSGEEISSV 460

Query: 463 ACGWWHTLLL 472
           + G  HTL++
Sbjct: 461 SGGEKHTLIV 470



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 38/112 (33%), Positives = 61/112 (54%), Gaps = 2/112 (1%)

Query: 320 ALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN 379
           ++++FG G  GQ G     D+L P  +  L G +I+ +A G  H++ ++  GDVY++G  
Sbjct: 2   SVISFGVGKQGQLGLDVNKDQLDPAVIQLLKGKRIKQIACGEAHSLAVTEFGDVYSWGRG 61

Query: 380 QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWG 431
           + G+LG         P L+ A  LE+     V+CG  H+  + D GKV+ WG
Sbjct: 62  KEGELGHPQKAMTAPPALIKA--LEHERIVKVACGNYHSLALTDTGKVYQWG 111



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 79/171 (46%), Gaps = 13/171 (7%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
           +I  VA G   T+A+S+ G+++ +G+G  GQLG         +      ++ +   DR  
Sbjct: 337 KIVQVATGANFTMAVSENGELFSFGHGEYGQLG---------ATEDTQYMDWNNNGDRDD 387

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL 341
            L + S+  +          V+ +ACG  H+  +T    + T+GWG  G  G G    +L
Sbjct: 388 HL-KYSLPKQVKALESVK--VRKVACGHLHTIAVTTDNDVYTWGWGSSGCLGFGDRKFQL 444

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICI-SSDGDVYAFGGNQFGQLGTGGDQA 391
            P  V SL G +I  V+ G  HT+ + SSD   +AF   Q       GD A
Sbjct: 445 VPQRVPSLSGEEISSVSGGEKHTLIVRSSDTTTFAFDYKQLVNDQKTGDIA 495



 Score = 42.7 bits (99), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 3/101 (2%)

Query: 373 VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGW 432
           V +FG  + GQLG   ++ +  P ++    L+    K ++CG  H+  + + G V+ WG 
Sbjct: 3   VISFGVGKQGQLGLDVNKDQLDPAVIQL--LKGKRIKQIACGEAHSLAVTEFGDVYSWGR 60

Query: 433 NKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLL 472
            K G+LG         P+ +  +E      VACG +H+L L
Sbjct: 61  GKEGELGHPQKAMTAPPALIKALEHERIVKVACGNYHSLAL 101


>gi|444910521|ref|ZP_21230705.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444719140|gb|ELW59939.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 715

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 126/469 (26%), Positives = 190/469 (40%), Gaps = 104/469 (22%)

Query: 85  HGEIPE--------PFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGD 136
           HGE+          P  +     ++  AAG+ H +A+   G V+ WG          +G+
Sbjct: 25  HGELGNGTATDSLSPVQVSNLTGVISVAAGYYHSLALKSDGTVWAWGLN-------TYGN 77

Query: 137 L--STGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLA 194
           L  +T T   K V   Q   LT  ++  +   +S    S GT         S     S A
Sbjct: 78  LGDNTTTTRTKPV---QVLNLTGVIAIAADYYQSFALKSDGTVWSWGYNGNSALGNASPA 134

Query: 195 KQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG 254
            Q   +     +   +F  +  L+P   +  +AAG  HTLAL   G VW WG    GQLG
Sbjct: 135 TQKLPA-----QVQQSFGGI--LSPLTDVVAIAAGTHHTLALKSNGTVWSWGLNSSGQLG 187

Query: 255 LGSRIRMVSSPHPIPCIES--------------------SYGKDRSAALSRGSVNSEGPG 294
            G+     ++   +   ++                    S+G +    L  G+  +    
Sbjct: 188 NGTLATQSAAVQAVNLTDAVAISAGAAHSLALRANGAVVSWGANTYGQLGNGTTTTSASP 247

Query: 295 FRVPG-NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ 353
             V G N +K +A GG HS  +   G +  +G+  YGQ G G+T + LSP  VS+L G+ 
Sbjct: 248 VGVSGLNNIKSLAAGGNHSLALKSDGTVTAWGYNAYGQVGNGATANVLSPIAVSTLSGVT 307

Query: 354 -------------------------------------------------IEGVAAGLWHT 364
                                                            ++GVA G  HT
Sbjct: 308 AVSAGVSHSHAIGSSNGVIWGWGLNTYGGLGNNTKVNRSTPGTILLTSGLQGVAGGAQHT 367

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           I +  DG V+A+G N +GQ+G G       P  L   +L  +   +V+ GA H+  +A +
Sbjct: 368 IYVKGDGTVWAWGSNTYGQIGDGTPLRRLTPVQLS--TLTGI--IAVAAGANHSLALAAN 423

Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLL 472
           G VF WG N +GQLG G   +R++P+QV  + G V   +A G  H+L L
Sbjct: 424 GTVFAWGRNNHGQLGDGSTTNRSLPTQVPNLTGIVA--LAAGATHSLAL 470



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 107/438 (24%), Positives = 183/438 (41%), Gaps = 57/438 (13%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
           G   ++A+  +  +++WG+ +  GQ  + +G       P  +    +I   AAG  H +A
Sbjct: 212 GAAHSLALRANGAVVSWGA-NTYGQ--LGNGTTTTSASPVGVSGLNNIKSLAAGGNHSLA 268

Query: 113 VTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQS-SFLTEQVSPRSQVSRSSG- 170
           +   G V  WG+         +G +  G G   +V    + S L+   +  + VS S   
Sbjct: 269 LKSDGTVTAWGYNA-------YGQV--GNGATANVLSPIAVSTLSGVTAVSAGVSHSHAI 319

Query: 171 GTSSGTD-GRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAG 229
           G+S+G   G G    G       + + T              P  + L  G++   VA G
Sbjct: 320 GSSNGVIWGWGLNTYGGLGNNTKVNRST--------------PGTILLTSGLQ--GVAGG 363

Query: 230 GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS----------------SPHPIPCIES 273
            +HT+ +   G VW WG    GQ+G G+ +R ++                + H +    +
Sbjct: 364 AQHTIYVKGDGTVWAWGSNTYGQIGDGTPLRRLTPVQLSTLTGIIAVAAGANHSLALAAN 423

Query: 274 ----SYGKDRSAALSRGSVNSEGPGFRVPG-NYVKGIACGGRHSAVITDAGALLTFGWGL 328
               ++G++    L  GS  +     +VP    +  +A G  HS  +   G +  +G   
Sbjct: 424 GTVFAWGRNNHGQLGDGSTTNRSLPTQVPNLTGIVALAAGATHSLALRFDGTVYAWGRNH 483

Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQL-GTG 387
            GQ G  +  D LSP  V  L   ++  ++AG  H++ I  +G  +A+G ++ GQL  +G
Sbjct: 484 LGQLGDETCTDRLSPVAVHYLE--KVVAISAGDNHSLAIHQNGTAFAWGSDEHGQLCDSG 541

Query: 388 GDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
                  P +   P +  V    ++ GA HT ++  +G  +  G N YGQLG G   D++
Sbjct: 542 SGSGRFSPLISQIPGI--VKGIGIAAGANHTLLLEANGTAWACGDNLYGQLGDGTTTDKS 599

Query: 448 IPSQVTIEGCVPRNVACG 465
            P  +T      R  A G
Sbjct: 600 APVPITTLTNAARLAAGG 617



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 128/489 (26%), Positives = 193/489 (39%), Gaps = 95/489 (19%)

Query: 9   KMERVVFMWGYLPGALPQ-----RSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDS 63
           K +  V  WGY   A  Q      + +LSP+ V     V          G   + AI  S
Sbjct: 270 KSDGTVTAWGY--NAYGQVGNGATANVLSPIAVSTLSGV-----TAVSAGVSHSHAIGSS 322

Query: 64  RKLI-TWGSTDDLGQSYVTSGKHGEIPEPFP--LPTEASIVKAAAGWAHCVAVTEGGEVY 120
             +I  WG       +Y   G + ++    P  +   + +   A G  H + V   G V+
Sbjct: 323 NGVIWGWGL-----NTYGGLGNNTKVNRSTPGTILLTSGLQGVAGGAQHTIYVKGDGTVW 377

Query: 121 TWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGT---- 176
            WG          +G +  GT L + +   Q S LT  ++  +  + S    ++GT    
Sbjct: 378 AWG-------SNTYGQIGDGTPLRR-LTPVQLSTLTGIIAVAAGANHSLALAANGTVFAW 429

Query: 177 --DGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTL 234
             +  G   +GS   R SL  Q               P L        I  +AAG  H+L
Sbjct: 430 GRNNHGQLGDGSTTNR-SLPTQ--------------VPNLT------GIVALAAGATHSL 468

Query: 235 ALSDIGQVWGWGYGGEGQLG---LGSRIRMVSSPHPIPCIESSYGKDRSAALSR------ 285
           AL   G V+ WG    GQLG      R+  V+  +    +  S G + S A+ +      
Sbjct: 469 ALRFDGTVYAWGRNHLGQLGDETCTDRLSPVAVHYLEKVVAISAGDNHSLAIHQNGTAFA 528

Query: 286 ------GSVNSEGPGF--------RVPGNYVKGI--ACGGRHSAVITDAGALLTFGWGLY 329
                 G +   G G         ++PG  VKGI  A G  H+ ++   G     G  LY
Sbjct: 529 WGSDEHGQLCDSGSGSGRFSPLISQIPG-IVKGIGIAAGANHTLLLEANGTAWACGDNLY 587

Query: 330 GQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD 389
           GQ G G+T D+ +P  +++L       +AAG   +  ++++G V  +G N  GQLG    
Sbjct: 588 GQLGDGTTTDKSAPVPITTL--TNAARLAAGGNTSAALTTNGTVSTWGLNSSGQLG---- 641

Query: 390 QAETLPRLLDAPSLENVHSK--------SVSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
              T  R   AP L  V+          S+  G  H   +  DG V  WG N  GQ+G G
Sbjct: 642 DNTTASRTTIAPVLRTVYPTVEVFSGVASLGAGTAHLTAVKTDGYVHSWGLNDSGQIGDG 701

Query: 442 DVIDRNIPS 450
            +++R +P+
Sbjct: 702 TLVNRPLPT 710



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 73/145 (50%), Gaps = 6/145 (4%)

Query: 308 GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI 367
           G  H+  +   G +   G+  +G+ G G+  D LSP  VS+L G  +  VAAG +H++ +
Sbjct: 4   GAHHTLAVRQDGTVWASGYNYHGELGNGTATDSLSPVQVSNLTG--VISVAAGYYHSLAL 61

Query: 368 SSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKV 427
            SDG V+A+G N +G LG       T P  +   +L  V   +++     +  +  DG V
Sbjct: 62  KSDGTVWAWGLNTYGNLGDNTTTTRTKP--VQVLNLTGV--IAIAADYYQSFALKSDGTV 117

Query: 428 FCWGWNKYGQLGLGDVIDRNIPSQV 452
           + WG+N    LG      + +P+QV
Sbjct: 118 WSWGYNGNSALGNASPATQKLPAQV 142



 Score = 43.1 bits (100), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 3/60 (5%)

Query: 414 GARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
           GA HT  +  DG V+  G+N +G+LG G   D   P QV+ + G +  +VA G++H+L L
Sbjct: 4   GAHHTLAVRQDGTVWASGYNYHGELGNGTATDSLSPVQVSNLTGVI--SVAAGYYHSLAL 61


>gi|281207647|gb|EFA81827.1| putative protein serine/threonine kinase [Polysphondylium pallidum
           PN500]
          Length = 1626

 Score =  124 bits (310), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 88/294 (29%), Positives = 138/294 (46%), Gaps = 44/294 (14%)

Query: 217 LNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES--- 273
           L P  RI  V AG  H   +S  G+++ WG G  G+LG G     +S+P  +  + +   
Sbjct: 125 LYPEERIILVNAGAAHIAMISQSGKLFTWGEGQYGRLGHGDE-ESISTPKQVVALANIPM 183

Query: 274 ----------------------SYGKDRSAALSRGSVNSE----GPGFRVPG-NYVKGIA 306
                                 ++G +    L RG    +         VPG   +  + 
Sbjct: 184 KYVFCGGRSTIALSHTAGSGLYTWGNNEFGQLGRGDCGDDFTCLPESVAVPGAKRLVALD 243

Query: 307 CGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC 366
            G   +AVI  +GAL T+G G +G+ G G T++   P  VSSL G  +  VA G  H++ 
Sbjct: 244 AGASRAAVIDSSGALFTWGRGDHGRLGHGDTENRYQPTLVSSLYGHVVVAVALGGGHSLA 303

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETL-PRLL----DAPSLENVHSKSVSCGARHTAVI 421
           ++  G+++++G  + GQLG G  Q++ L P+ L    D P +       +S G  H+   
Sbjct: 304 LTKAGELFSWGRGENGQLGHGSYQSQQLAPKQLQFFVDMPKI-----IGISAGGYHSVAQ 358

Query: 422 ADDGKVFCWGWNKYGQLGLGDVIDR--NIPSQVTI-EGCVPRNVACGWWHTLLL 472
            DDG V+ WG + YG LG GD  D   NIP ++ +  G   + ++CG+ HT+ L
Sbjct: 359 LDDGSVYAWGMSDYGILGTGDSDDGAINIPQRILMPRGIRFKTISCGFQHTVAL 412



 Score =  108 bits (270), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 100/388 (25%), Positives = 163/388 (42%), Gaps = 62/388 (15%)

Query: 97  EASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLT 156
           E  I+   AG AH   +++ G+++TWG  +       +G L  G   D++        + 
Sbjct: 128 EERIILVNAGAAHIAMISQSGKLFTWGEGQ-------YGRLGHG---DEESISTPKQVVA 177

Query: 157 EQVSPRSQV---SRSSGGTS----SGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLS 209
               P   V    RS+   S    SG    G+ E G   R              GD+  +
Sbjct: 178 LANIPMKYVFCGGRSTIALSHTAGSGLYTWGNNEFGQLGR-----------GDCGDD-FT 225

Query: 210 AFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP 269
             P  V +    R+  + AG      +   G ++ WG G  G+LG G             
Sbjct: 226 CLPESVAVPGAKRLVALDAGASRAAVIDSSGALFTWGRGDHGRLGHGD------------ 273

Query: 270 CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
             E+ Y     ++L               G+ V  +A GG HS  +T AG L ++G G  
Sbjct: 274 -TENRYQPTLVSSLY--------------GHVVVAVALGGGHSLALTKAGELFSWGRGEN 318

Query: 330 GQCGQGS-TDDELSPNCVSSLLGI-QIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG 387
           GQ G GS    +L+P  +   + + +I G++AG +H++    DG VYA+G + +G LGTG
Sbjct: 319 GQLGHGSYQSQQLAPKQLQFFVDMPKIIGISAGGYHSVAQLDDGSVYAWGMSDYGILGTG 378

Query: 388 G--DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVID 445
              D A  +P+ +  P    +  K++SCG +HT  +  D  ++ WG    G+LG  +  +
Sbjct: 379 DSDDGAINIPQRILMP--RGIRFKTISCGFQHTVALTSDNTIYSWGCGLGGRLGTFNEKN 436

Query: 446 RNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           +  P    I    P   + G   T+++ 
Sbjct: 437 QCAPIACNIPNYQPVVFSAGEISTIVIG 464



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 109/399 (27%), Positives = 160/399 (40%), Gaps = 79/399 (19%)

Query: 49  VCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEA-SIVKAAAGW 107
           V  G    AM IS S KL TWG     GQ Y   G HG+  E    P +  ++      +
Sbjct: 134 VNAGAAHIAM-ISQSGKLFTWGE----GQ-YGRLG-HGD-EESISTPKQVVALANIPMKY 185

Query: 108 AHC-------VAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFL---TE 157
             C       ++ T G  +YTWG  E       FG L  G   D      +S  +     
Sbjct: 186 VFCGGRSTIALSHTAGSGLYTWGNNE-------FGQLGRGDCGDDFTCLPESVAVPGAKR 238

Query: 158 QVSPRSQVSRSSGGTSSG---TDGRGS-GEEGSKRRRISLAKQTAESSSSGDENLSAFPC 213
            V+  +  SR++   SSG   T GRG  G  G                  GD      P 
Sbjct: 239 LVALDAGASRAAVIDSSGALFTWGRGDHGRLGH-----------------GDTENRYQPT 281

Query: 214 LVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES 273
           LV+   G  +  VA GG H+LAL+  G+++ WG G  GQLG GS      +P  +     
Sbjct: 282 LVSSLYGHVVVAVALGGGHSLALTKAGELFSWGRGENGQLGHGSYQSQQLAPKQLQ---- 337

Query: 274 SYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCG 333
                                F V    + GI+ GG HS    D G++  +G   YG  G
Sbjct: 338 ---------------------FFVDMPKIIGISAGGYHSVAQLDDGSVYAWGMSDYGILG 376

Query: 334 QGSTDDELS--PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
            G +DD     P  +    GI+ + ++ G  HT+ ++SD  +Y++G    G+LGT  ++ 
Sbjct: 377 TGDSDDGAINIPQRILMPRGIRFKTISCGFQHTVALTSDNTIYSWGCGLGGRLGTFNEKN 436

Query: 392 ETLPRLLDAPSLENV-----HSKSVSCGARHTAVIADDG 425
           +  P   + P+ + V        ++  G ++T V    G
Sbjct: 437 QCAPIACNIPNYQPVVFSAGEISTIVIGKKNTVVATSSG 475


>gi|145593730|ref|YP_001158027.1| cell wall anchor domain-containing protein [Salinispora tropica
           CNB-440]
 gi|145303067|gb|ABP53649.1| LPXTG-motif cell wall anchor domain [Salinispora tropica CNB-440]
          Length = 558

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 93/275 (33%), Positives = 126/275 (45%), Gaps = 29/275 (10%)

Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR-----MVS 263
           S+ P  V L  G  +A VAAG RH++AL+  G V  WG   EGQLG G+         VS
Sbjct: 75  SSEPIAVRLPTGTTVAAVAAGDRHSVALTSAGTVLAWGRNTEGQLGNGTTTSSGEPVAVS 134

Query: 264 SPHPIPCIESSYGKDRSAALSR-----------------GSVNSEGPGFRV---PGNYVK 303
            P  I  +  + G D S AL+                  GSV S      V   P   V 
Sbjct: 135 LPSGIRIVAVAVGADHSLALTSTGSLLAWGSNDTGQLGDGSVTSSSTPVAVRLPPNTTVA 194

Query: 304 GIACGGRHSAVITDAG--ALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
            IA G  H+ V+T  G  ALL +G    GQ G G+  D   P  V+   G+ +  +A G 
Sbjct: 195 AIAAGRDHNLVLTATGPAALLAWGANREGQLGDGTVVDRSRPVPVNLPTGLTVTAIAGGR 254

Query: 362 WHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
            H++ ++SD  V A+GGN  GQLG G      LP  +  P      + +++ G  H+  +
Sbjct: 255 DHSLALTSDDTVLAWGGNSHGQLGDGTTTGSLLPVTVVLP--VGAEATAIAAGRLHSLAL 312

Query: 422 ADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEG 456
             DG    WG N +GQLG G   D + P  V++ G
Sbjct: 313 TSDGTALAWGGNHWGQLGNGSTSDSSEPVAVSLPG 347



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 93/304 (30%), Positives = 132/304 (43%), Gaps = 41/304 (13%)

Query: 203 SGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMV 262
           +G    S  P  V+L  G+RI  VA G  H+LAL+  G +  WG    GQLG GS   + 
Sbjct: 121 NGTTTSSGEPVAVSLPSGIRIVAVAVGADHSLALTSTGSLLAWGSNDTGQLGDGS---VT 177

Query: 263 SSPHPI---------------------------PCIESSYGKDRSAALSRGSV--NSEGP 293
           SS  P+                           P    ++G +R   L  G+V   S   
Sbjct: 178 SSSTPVAVRLPPNTTVAAIAAGRDHNLVLTATGPAALLAWGANREGQLGDGTVVDRSRPV 237

Query: 294 GFRVP-GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGI 352
              +P G  V  IA G  HS  +T    +L +G   +GQ G G+T   L P  V   +G 
Sbjct: 238 PVNLPTGLTVTAIAGGRDHSLALTSDDTVLAWGGNSHGQLGDGTTTGSLLPVTVVLPVGA 297

Query: 353 QIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVS 412
           +   +AAG  H++ ++SDG   A+GGN +GQLG G     + P  +  P      ++ +S
Sbjct: 298 EATAIAAGRLHSLALTSDGTALAWGGNHWGQLGNGSTSDSSEPVAVSLPG----GTRLIS 353

Query: 413 CGAR---HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACGWWH 468
             +R   H   I  +G    WG N  G LG G   D   P  V++  G    ++A G  H
Sbjct: 354 IASRDSDHNVAITTEGAALAWGLNSQGHLGDGTTTDSATPVAVSLPAGAALTSIAVGDDH 413

Query: 469 TLLL 472
           +L L
Sbjct: 414 SLAL 417



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 67/188 (35%), Positives = 95/188 (50%), Gaps = 6/188 (3%)

Query: 289 NSEGPGFRVP-GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVS 347
           +SE    R+P G  V  +A G RHS  +T AG +L +G    GQ G G+T     P  VS
Sbjct: 75  SSEPIAVRLPTGTTVAAVAAGDRHSVALTSAGTVLAWGRNTEGQLGNGTTTSSGEPVAVS 134

Query: 348 SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVH 407
              GI+I  VA G  H++ ++S G + A+G N  GQLG G   + + P  +  P   N  
Sbjct: 135 LPSGIRIVAVAVGADHSLALTSTGSLLAWGSNDTGQLGDGSVTSSSTPVAVRLP--PNTT 192

Query: 408 SKSVSCGARHTAVIADDG--KVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVAC 464
             +++ G  H  V+   G   +  WG N+ GQLG G V+DR+ P  V +  G     +A 
Sbjct: 193 VAAIAAGRDHNLVLTATGPAALLAWGANREGQLGDGTVVDRSRPVPVNLPTGLTVTAIAG 252

Query: 465 GWWHTLLL 472
           G  H+L L
Sbjct: 253 GRDHSLAL 260



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 83/176 (47%), Gaps = 9/176 (5%)

Query: 302 VKGIACGGRH----SAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGV 357
           + G     RH    +AV++DA  +L +G    GQ G G+T D   P  V    G  +  V
Sbjct: 35  IGGSPASARHQPASAAVMSDA--ILAWGGNDGGQLGDGTTTDSSEPIAVRLPTGTTVAAV 92

Query: 358 AAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARH 417
           AAG  H++ ++S G V A+G N  GQLG G   +   P  +  PS   +   +V+ GA H
Sbjct: 93  AAGDRHSVALTSAGTVLAWGRNTEGQLGNGTTTSSGEPVAVSLPS--GIRIVAVAVGADH 150

Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACGWWHTLLL 472
           +  +   G +  WG N  GQLG G V   + P  V +        +A G  H L+L
Sbjct: 151 SLALTSTGSLLAWGSNDTGQLGDGSVTSSSTPVAVRLPPNTTVAAIAAGRDHNLVL 206



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 97/378 (25%), Positives = 144/378 (38%), Gaps = 63/378 (16%)

Query: 33  PLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDD--LGQSYVTSGKHGEIPE 90
           P+ VRLP   G+    V  G    ++A++ +  ++ WG   +  LG    TS   GE P 
Sbjct: 78  PIAVRLP--TGTTVAAVAAGDR-HSVALTSAGTVLAWGRNTEGQLGNGTTTSS--GE-PV 131

Query: 91  PFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFER 150
              LP+   IV  A G  H +A+T  G +  WG  +        G L  G+         
Sbjct: 132 AVSLPSGIRIVAVAVGADHSLALTSTGSLLAWGSNDT-------GQLGDGS------VTS 178

Query: 151 QSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEG----SKRRRISLAKQTAESSSSGDE 206
            S+ +  ++ P + V+  + G         +G          R   L   T    S    
Sbjct: 179 SSTPVAVRLPPNTTVAAIAAGRDHNLVLTATGPAALLAWGANREGQLGDGTVVDRSR--- 235

Query: 207 NLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPH 266
                P  V L  G+ +  +A G  H+LAL+    V  WG    GQLG G+      S  
Sbjct: 236 -----PVPVNLPTGLTVTAIAGGRDHSLALTSDDTVLAWGGNSHGQLGDGT---TTGSLL 287

Query: 267 PIPCIESSYGKDRSAALSRGSVNSEGPGFRVP-GNYVKGIACGGRHSAVITDAGALLTFG 325
           P+  +                         +P G     IA G  HS  +T  G  L +G
Sbjct: 288 PVTVV-------------------------LPVGAEATAIAAGRLHSLALTSDGTALAWG 322

Query: 326 WGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAA-GLWHTICISSDGDVYAFGGNQFGQL 384
              +GQ G GST D   P  VS   G ++  +A+    H + I+++G   A+G N  G L
Sbjct: 323 GNHWGQLGNGSTSDSSEPVAVSLPGGTRLISIASRDSDHNVAITTEGAALAWGLNSQGHL 382

Query: 385 GTGGDQAETLPRLLDAPS 402
           G G       P  +  P+
Sbjct: 383 GDGTTTDSATPVAVSLPA 400



 Score = 39.7 bits (91), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 100/261 (38%), Gaps = 33/261 (12%)

Query: 32  SPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDD--LGQSYVTSGKHGEIP 89
           +P+ VRLP     A     G      +  +    L+ WG+  +  LG   V        P
Sbjct: 181 TPVAVRLPPNTTVA-AIAAGRDHNLVLTATGPAALLAWGANREGQLGDGTVVDRSR---P 236

Query: 90  EPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFE 149
            P  LPT  ++   A G  H +A+T    V  WG       G++    +TG+ L   V  
Sbjct: 237 VPVNLPTGLTVTAIAGGRDHSLALTSDDTVLAWGGNS---HGQLGDGTTTGSLLPVTVVL 293

Query: 150 RQSSFLTEQVSPR-SQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENL 208
              +  T   + R   ++ +S GT+    G   G+ G                 +G  + 
Sbjct: 294 PVGAEATAIAAGRLHSLALTSDGTALAWGGNHWGQLG-----------------NGSTSD 336

Query: 209 SAFPCLVTLNPGVRIATVAA-GGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR-----MV 262
           S+ P  V+L  G R+ ++A+    H +A++  G    WG   +G LG G+         V
Sbjct: 337 SSEPVAVSLPGGTRLISIASRDSDHNVAITTEGAALAWGLNSQGHLGDGTTTDSATPVAV 396

Query: 263 SSPHPIPCIESSYGKDRSAAL 283
           S P        + G D S AL
Sbjct: 397 SLPAGAALTSIAVGDDHSLAL 417


>gi|428177727|gb|EKX46605.1| hypothetical protein GUITHDRAFT_48927, partial [Guillardia theta
           CCMP2712]
          Length = 316

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 82/237 (34%), Positives = 118/237 (49%), Gaps = 29/237 (12%)

Query: 203 SGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMV 262
           +G +  +  P  V    GV   +V+ GG HT+ +S+ G+V+ WG G  GQLG GSR  + 
Sbjct: 63  TGTQEQTEHPTFVGSLFGVACMSVSCGGAHTVVVSEDGRVFSWGLGANGQLGHGSRDNL- 121

Query: 263 SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL 322
           ++P     +++  G+D                       V  + CG  H+ ++   G L 
Sbjct: 122 TTP---SVVQAMRGRD-----------------------VLAVTCGVGHTVIVLAGGELY 155

Query: 323 TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFG 382
           T GW   GQCG GST D LSP CV SL G  ++  + G  HT  ++  G+V+ FG    G
Sbjct: 156 TCGWNKNGQCGVGSTSDLLSPQCVESLRGEGVQHASCGAGHTAVVTGGGEVFTFGSGSCG 215

Query: 383 QLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG 439
           QLG G  Q  ++PR + A  L  +    V+CG  +T   A D +VF +G N  GQLG
Sbjct: 216 QLGHGDCQDLSMPRRVGA--LVGIVMSMVACGEEYTVCAAFDHRVFGFGLNNVGQLG 270



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 138/274 (50%), Gaps = 30/274 (10%)

Query: 201 SSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR 260
           S+ G++  S+ P ++    G ++  VA G  H+  +   G+V  WG    GQ G G++ +
Sbjct: 9   SAVGEQVSSSTPRMLKKAMGRQVRDVACGLVHSAMVMGSGEVLCWGENKYGQCGTGTQEQ 68

Query: 261 MVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA 320
              + HP   + S +G    A +S                    ++CGG H+ V+++ G 
Sbjct: 69  ---TEHPTF-VGSLFG---VACMS--------------------VSCGGAHTVVVSEDGR 101

Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
           + ++G G  GQ G GS D+  +P+ V ++ G  +  V  G+ HT+ + + G++Y  G N+
Sbjct: 102 VFSWGLGANGQLGHGSRDNLTTPSVVQAMRGRDVLAVTCGVGHTVIVLAGGELYTCGWNK 161

Query: 381 FGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL 440
            GQ G G       P+ +++   E V  +  SCGA HTAV+   G+VF +G    GQLG 
Sbjct: 162 NGQCGVGSTSDLLSPQCVESLRGEGV--QHASCGAGHTAVVTGGGEVFTFGSGSCGQLGH 219

Query: 441 GDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLA 473
           GD  D ++P +V  + G V   VACG  +T+  A
Sbjct: 220 GDCQDLSMPRRVGALVGIVMSMVACGEEYTVCAA 253


>gi|209878252|ref|XP_002140567.1| regulator of chromosome condensation family protein
           [Cryptosporidium muris RN66]
 gi|209556173|gb|EEA06218.1| regulator of chromosome condensation family protein
           [Cryptosporidium muris RN66]
          Length = 477

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/283 (31%), Positives = 137/283 (48%), Gaps = 32/283 (11%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMV----------------SSP 265
           RI  V  GG H+  ++  G++  WGYGG GQLGLG    +V                S  
Sbjct: 43  RIKEVCCGGHHSAVITHSGELIVWGYGGCGQLGLGDLKDIVIPRVMTSIKNVINVSCSDR 102

Query: 266 HPIPCIES----SYGKDRSAALSRGSVNSEGPGF---------RVPGNYVKGIACGGRHS 312
           H    +E     ++G ++S  L  GS+N               ++    V  ++CG  H+
Sbjct: 103 HSAAILEDGRLYTWGCNKSGKLGIGSLNVNLNNNIICTPQLVEKLLNEKVIKVSCGSFHT 162

Query: 313 AVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGD 372
           A +TD     T+G G+ G+ G G T+D  +P  + SL G+ ++ +  G  HT  + ++G 
Sbjct: 163 ACLTDLNKAYTWGLGMQGRLGHGDTNDVYTPKLIESLAGLSVKNIVCGGHHTAILLNNGK 222

Query: 373 VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGW 432
           VY  GG  FG+LG G  +   +P+LL   SL N   K VS G +H+AVI   GKV+ WG 
Sbjct: 223 VYFCGGGAFGKLGFGSKEDIYIPKLLQG-SLTNKSIKEVSLGYQHSAVITTKGKVYTWGQ 281

Query: 433 -NKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLA 473
             + G +  G   D   P  V  +   +  N++CG  HT++++
Sbjct: 282 GGRLGHIYNGPEPDILSPKLVEKLNSIIAVNISCGHSHTVVIS 324



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 113/416 (27%), Positives = 181/416 (43%), Gaps = 58/416 (13%)

Query: 66  LITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
           ++ WGS++   LG  Y  S    ++ E   L +   I +   G  H   +T  GE+  WG
Sbjct: 10  VVAWGSSEYGQLGAIYEESNIEPKLIES--LYSFNRIKEVCCGGHHSAVITHSGELIVWG 67

Query: 124 WKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGE 183
           +  C   G   GDL       KD+   +     + V   S   R S       DGR    
Sbjct: 68  YGGCGQLG--LGDL-------KDIVIPRVMTSIKNVINVSCSDRHSAAILE--DGRLYTW 116

Query: 184 EGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVW 243
             +K  ++ +       +++        P LV      ++  V+ G  HT  L+D+ + +
Sbjct: 117 GCNKSGKLGIGSLNVNLNNNI----ICTPQLVEKLLNEKVIKVSCGSFHTACLTDLNKAY 172

Query: 244 GWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVK 303
            WG G +G+LG G     V +P  I  +         A LS                 VK
Sbjct: 173 TWGLGMQGRLGHGDT-NDVYTPKLIESL---------AGLS-----------------VK 205

Query: 304 GIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVS-SLLGIQIEGVAAGLW 362
            I CGG H+A++ + G +   G G +G+ G GS +D   P  +  SL    I+ V+ G  
Sbjct: 206 NIVCGGHHTAILLNNGKVYFCGGGAFGKLGFGSKEDIYIPKLLQGSLTNKSIKEVSLGYQ 265

Query: 363 HTICISSDGDVYAFG-GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
           H+  I++ G VY +G G + G +  G +     P+L++   L ++ + ++SCG  HT VI
Sbjct: 266 HSAVITTKGKVYTWGQGGRLGHIYNGPEPDILSPKLVE--KLNSIIAVNISCGHSHTVVI 323

Query: 422 ADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRN----VACGWWHTLLLA 473
           ++ G V+ WG  +   LG G VID   P+  T+   +       V+CG  HT+ L+
Sbjct: 324 SNIGDVYAWGVTR--NLGHG-VIDSK-PNDPTLHPILQNKNIVQVSCGKTHTIALS 375



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 119/411 (28%), Positives = 177/411 (43%), Gaps = 65/411 (15%)

Query: 22  GALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVT 81
           GA+ + S I   L+    L   +  ++VC GG   A+ I+ S +LI WG     G   + 
Sbjct: 22  GAIYEESNIEPKLIE--SLYSFNRIKEVCCGGHHSAV-ITHSGELIVWGYG---GCGQLG 75

Query: 82  SGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRV-FGDLSTG 140
            G   +I  P  + +  +++  +    H  A+ E G +YTWG   C  SG++  G L+  
Sbjct: 76  LGDLKDIVIPRVMTSIKNVINVSCSDRHSAAILEDGRLYTWG---CNKSGKLGIGSLNVN 132

Query: 141 TGLDKDVF-ERQSSFLTEQVSPRSQVSRSSGGTSSGTDGR-----GSGEEGSKRRRISLA 194
              +     +     L E+V    +VS  S  T+  TD       G G +G         
Sbjct: 133 LNNNIICTPQLVEKLLNEKVI---KVSCGSFHTACLTDLNKAYTWGLGMQGR-------- 181

Query: 195 KQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG 254
                    GD N    P L+    G+ +  +  GG HT  L + G+V+  G G  G+LG
Sbjct: 182 ------LGHGDTNDVYTPKLIESLAGLSVKNIVCGGHHTAILLNNGKVYFCGGGAFGKLG 235

Query: 255 LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAV 314
            GS+  +      IP             L +GS+ ++          +K ++ G +HSAV
Sbjct: 236 FGSKEDIY-----IP------------KLLQGSLTNKS---------IKEVSLGYQHSAV 269

Query: 315 ITDAGALLTFGW-GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDV 373
           IT  G + T+G  G  G    G   D LSP  V  L  I    ++ G  HT+ IS+ GDV
Sbjct: 270 ITTKGKVYTWGQGGRLGHIYNGPEPDILSPKLVEKLNSIIAVNISCGHSHTVVISNIGDV 329

Query: 374 YAFGGNQFGQLGTGG-DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
           YA+G  +   LG G  D     P L   P L+N +   VSCG  HT  ++D
Sbjct: 330 YAWGVTR--NLGHGVIDSKPNDPTL--HPILQNKNIVQVSCGKTHTIALSD 376


>gi|428170910|gb|EKX39831.1| hypothetical protein GUITHDRAFT_164838 [Guillardia theta CCMP2712]
          Length = 1983

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/248 (34%), Positives = 121/248 (48%), Gaps = 16/248 (6%)

Query: 206 ENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSP 265
           E +   P +V     V +   A G +HTL LS  G V   G    GQLG+G  +   S+P
Sbjct: 108 EEIQHVPYIVPAFRNVLVKVCALGKQHTLFLSADGVVLSCGSNVYGQLGMGDHMLSRSTP 167

Query: 266 HPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFG 325
              P  + S  K ++   S               N + GIA G  HS  + D G + ++G
Sbjct: 168 VSEPSKQKSLDKLQAIIQSL--------------NNIVGIAAGYYHSLALNDTGKIFSWG 213

Query: 326 WGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLG 385
            G +G+ G GS  +  SP  V+SL   ++  +A G  HT  I++ GDV+ +G    GQLG
Sbjct: 214 SGSWGKLGIGSDANAESPRFVASLQNSKVVHIACGAHHTAAITTVGDVWTWGKGLRGQLG 273

Query: 386 TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVID 445
               + E  PRL    SL    ++ + CG  HT VI   G+++  G N +GQLGLGD  D
Sbjct: 274 HKSVKEEFSPRL--NASLRKCGAQKIRCGDDHTLVILRSGQLYSMGANTHGQLGLGDATD 331

Query: 446 RNIPSQVT 453
           R IP+ VT
Sbjct: 332 RIIPTLVT 339



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 125/274 (45%), Gaps = 35/274 (12%)

Query: 206  ENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSP 265
            + +++FP         +I  VA G  H+LA S  G V+ WG G  GQLG         S 
Sbjct: 1204 QEITSFPS------NTKIVEVACGCEHSLARSFDGGVYAWGAGDRGQLG---------SL 1248

Query: 266  HPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFG 325
                C++ +Y  +              P   +   ++  IACG  H+  +T    +L++G
Sbjct: 1249 ENFDCVKINYAFNPQ------------PVLNLKRYFILSIACGRWHNMTLTSERQVLSWG 1296

Query: 326  WGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLG 385
             G +GQ G      + +P  V +L G     +  G WH+  I   G +  +G N +GQLG
Sbjct: 1297 AGEFGQLGLDHNLSKGTPQMVKALDGRAPCKILCGGWHSAAILESGKILLWGKNVYGQLG 1356

Query: 386  TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGD--V 443
             G  ++ + PR+     LE    ++   GA HT V+    KVF  G N  GQLGL D   
Sbjct: 1357 HGDTKSCSAPRVNQYLRLEG-KVRTAGLGANHTLVVMVANKVFAMGSNIDGQLGLDDPSR 1415

Query: 444  IDRNIPSQVTIEGCVPRN---VACGWWHTLLLAV 474
              +N+P  V+IE    +N   VA G  H+L L+V
Sbjct: 1416 TGKNVP--VSIEELNGKNICQVAAGDQHSLALSV 1447



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 111/242 (45%), Gaps = 37/242 (15%)

Query: 193 LAKQTAESSSSGDENLSAFPCLV-TLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEG 251
           L++ T  S  S  ++L     ++ +LN    I  +AAG  H+LAL+D G+++ WG G  G
Sbjct: 162 LSRSTPVSEPSKQKSLDKLQAIIQSLN---NIVGIAAGYYHSLALNDTGKIFSWGSGSWG 218

Query: 252 QLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGG 309
           +LG+GS                               N+E P F   +  + V  IACG 
Sbjct: 219 KLGIGS-----------------------------DANAESPRFVASLQNSKVVHIACGA 249

Query: 310 RHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISS 369
            H+A IT  G + T+G GL GQ G  S  +E SP   +SL     + +  G  HT+ I  
Sbjct: 250 HHTAAITTVGDVWTWGKGLRGQLGHKSVKEEFSPRLNASLRKCGAQKIRCGDDHTLVILR 309

Query: 370 DGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFC 429
            G +Y+ G N  GQLG G      +P L+   + E V       G R  A + + GKVF 
Sbjct: 310 SGQLYSMGANTHGQLGLGDATDRIIPTLVTGFANEKVIDIDAK-GCRSIA-LTNTGKVFA 367

Query: 430 WG 431
           +G
Sbjct: 368 FG 369



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 120/476 (25%), Positives = 193/476 (40%), Gaps = 93/476 (19%)

Query: 47   RDVC--GGGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASI-- 100
            +++C    G   ++A+S   ++ +WG +    LG   +T     +   P PL     I  
Sbjct: 1430 KNICQVAAGDQHSLALSVFGEVWSWGGSPFGQLGHETIT-----DKLAPTPLLERHKIPP 1484

Query: 101  -VKA-AAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDV---------FE 149
             VK+ A G+    A++  GEV+TWG  E    G     L+    L KD          F+
Sbjct: 1485 DVKSIACGYTFSAAMSAKGEVFTWGNGESGELGHAPKVLTYAPSLIKDFSEVVQIACGFK 1544

Query: 150  RQSSFLTEQVSPRSQVSRSSGGTSSGTD----------GRGSGEEGSKRRRISLAKQTAE 199
              +  +     PR +    +G ++ G +          G  SG   S        + +A 
Sbjct: 1545 HMAGIV---FKPRMKTIELTGSSNIGDNSTTFSGSIAAGSVSGSTRSHTTGHHTTRTSAF 1601

Query: 200  SSSSGDENLSAF--------------------PCLVTLNPGVRIATVAAGGRHTLALSDI 239
            S+S+   +   F                    P L+       I  ++A    +  ++D 
Sbjct: 1602 SASNQKRHGCVFVWGEDTCGQLGIRGLQAARSPSLMQSLLATSIVHISANSDMSAFVTDS 1661

Query: 240  GQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPG 299
            G ++  G    G+LGLG    M  +P P+          RS    +              
Sbjct: 1662 GSLYVSGGSEHGRLGLG---HMAPAPTPVEI--------RSLNTVK-------------- 1696

Query: 300  NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAA 359
              +  +ACG  H   +T+   +  +G G +G  G  +T+D L P  +SSL    I GV A
Sbjct: 1697 --IMKVACGTYHCLALTEEKRVYAWGDGKWGNAGVSNTNDVLEPQELSSLAACSIIGVHA 1754

Query: 360  GLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPS-LENVHS--KSVSCGAR 416
            G +H+  +S  GD++ +G N  GQLG G   A       D+P+ + N+      VS GA 
Sbjct: 1755 GGFHSAALSQYGDLFMWGKNSNGQLGLGTTSAAE-----DSPTKISNLDGVVMDVSLGAN 1809

Query: 417  HTAVIAD--DGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            H+AV+       +F  G N  GQLGLGD +DR+  + V  ++     + +CG  HT
Sbjct: 1810 HSAVLMQVTSPNLFTCGLNANGQLGLGDFVDRSTLTAVDALDDRQIVSASCGAAHT 1865



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 84/288 (29%), Positives = 125/288 (43%), Gaps = 41/288 (14%)

Query: 223  IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI-----RMVSS-----PHPIPC-- 270
            I ++A G  H + L+   QV  WG G  GQLGL   +     +MV +     P  I C  
Sbjct: 1273 ILSIACGRWHNMTLTSERQVLSWGAGEFGQLGLDHNLSKGTPQMVKALDGRAPCKILCGG 1332

Query: 271  ------IESS----YGKDRSAALSRGSVNS-----EGPGFRVPGNYVKGIACGGRHSAVI 315
                  +ES     +GK+    L  G   S          R+ G  V+    G  H+ V+
Sbjct: 1333 WHSAAILESGKILLWGKNVYGQLGHGDTKSCSAPRVNQYLRLEGK-VRTAGLGANHTLVV 1391

Query: 316  TDAGALLTFGWGLYGQCG--QGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDV 373
              A  +   G  + GQ G    S   +  P  +  L G  I  VAAG  H++ +S  G+V
Sbjct: 1392 MVANKVFAMGSNIDGQLGLDDPSRTGKNVPVSIEELNGKNICQVAAGDQHSLALSVFGEV 1451

Query: 374  YAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHS-----KSVSCGARHTAVIADDGKVF 428
            +++GG+ FGQLG      ET+   L    L   H      KS++CG   +A ++  G+VF
Sbjct: 1452 WSWGGSPFGQLG-----HETITDKLAPTPLLERHKIPPDVKSIACGYTFSAAMSAKGEVF 1506

Query: 429  CWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAVPP 476
             WG  + G+LG    +    PS +     V + +ACG+ H   +   P
Sbjct: 1507 TWGNGESGELGHAPKVLTYAPSLIKDFSEVVQ-IACGFKHMAGIVFKP 1553



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 107/257 (41%), Gaps = 35/257 (13%)

Query: 223  IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
            I  V AGG H+ ALS  G ++ WG    GQLGLG+      SP  I  ++          
Sbjct: 1749 IIGVHAGGFHSAALSQYGDLFMWGKNSNGQLGLGTTSAAEDSPTKISNLDG--------- 1799

Query: 283  LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA--LLTFGWGLYGQCGQGSTDDE 340
                               V  ++ G  HSAV+    +  L T G    GQ G G   D 
Sbjct: 1800 ------------------VVMDVSLGANHSAVLMQVTSPNLFTCGLNANGQLGLGDFVDR 1841

Query: 341  LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
             +   V +L   QI   + G  HT  +S  GD+  +G  + GQLG     ++ +   +  
Sbjct: 1842 STLTAVDALDDRQIVSASCGAAHTAAVSQYGDLITWGNGRNGQLGLKAGLSKDIENPVQL 1901

Query: 401  PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT---IEGC 457
            P++ N     V CG   T V+++ G+++  G+     +GLG    R     V+   +EG 
Sbjct: 1902 PAICNDPMVKVVCGQEVTIVVSEKGELYMAGYE--STIGLGGNSSRRREFDVSFREVEGL 1959

Query: 458  V-PRNVACGWWHTLLLA 473
            + P  +A G  H L L 
Sbjct: 1960 IQPTQIAVGSVHVLALV 1976



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 122/516 (23%), Positives = 202/516 (39%), Gaps = 122/516 (23%)

Query: 48  DVCGGGCGF--AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAA 105
           ++ G   G+  ++A++D+ K+ +WGS    G+  + S  + E P        + +V  A 
Sbjct: 189 NIVGIAAGYYHSLALNDTGKIFSWGS-GSWGKLGIGSDANAESPRFVASLQNSKVVHIAC 247

Query: 106 GWAHCVAVTEGGEVYTWG-----------------------WKEC--------------- 127
           G  H  A+T  G+V+TWG                        ++C               
Sbjct: 248 GAHHTAAITTVGDVWTWGKGLRGQLGHKSVKEEFSPRLNASLRKCGAQKIRCGDDHTLVI 307

Query: 128 VPSGRVF-------GDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRG 180
           + SG+++       G L  G   D+ +    + F  E+V                 D +G
Sbjct: 308 LRSGQLYSMGANTHGQLGLGDATDRIIPTLVTGFANEKVID--------------IDAKG 353

Query: 181 SGEEGSKRRRISLAKQTAESSSSGDE---NLSAFPCLVT-LNPGVRIATVAAGGRHTLAL 236
                   R I+L   T +  + G+E   +L+  P  V  L     I  VA       A+
Sbjct: 354 C-------RSIALT-NTGKVFAFGNETEPHLNRIPRFVAGLPKSDLIIAVARTAHFDFAI 405

Query: 237 SDIGQVWGWG-YGGEGQLGLGSRIRMVSSPHPIP---------------------CIESS 274
           SD GQ++ W  +  E +       RM+ S H I                      C ++ 
Sbjct: 406 SDTGQLFRWRPFSSEEESS-----RMLESFHAIKGVVRMFCGHNHMAVICSPEMGCTQAM 460

Query: 275 YGKDRSAA----LSRGSVN---SEG--PGFRVPGNYVKGIA-CGGRHSAVITDAGALLTF 324
             +++S +    +SR S+    SE   P       Y+   A    R S      G + T+
Sbjct: 461 ISRNKSTSFSSDISRASLEKFPSEKILPALGTNTEYLDEFATVQVRDSPSREGDGYIYTY 520

Query: 325 GWGLYGQCGQG-----STDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN 379
           G G++G+ G G     S +    P  + +L  + +  +A G   T  ++  G VY +G +
Sbjct: 521 GKGVFGRLGHGVEYTRSEESVKHPKRIETLAKMSVVFIACGKDSTAALTDTGKVYTWGKS 580

Query: 380 QFGQLGTGGDQ--AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQ 437
             G+LG G  +  A  +P+L+   S   V    +S G  H A   D  K F WG N +GQ
Sbjct: 581 AQGKLGLGSGKPLAIVVPQLVQDLSSHVV--CQISLGRNHAACSTDMHKFFVWGSNTFGQ 638

Query: 438 LGLGDVIDRN-IPSQVT-IEGCVPRNVACGWWHTLL 471
           LG+  +      P ++T +     R++ACG WHTL+
Sbjct: 639 LGIPHISSYMPDPYEITSLREANIRSIACGGWHTLI 674



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 107/260 (41%), Gaps = 33/260 (12%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           + +  +A G   T AL+D G+V+ WG   +G+LGLG       S  P+  +     +D S
Sbjct: 553 MSVVFIACGKDSTAALTDTGKVYTWGKSAQGKLGLG-------SGKPLAIVVPQLVQDLS 605

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
           +                  + V  I+ G  H+A  TD      +G   +GQ G       
Sbjct: 606 S------------------HVVCQISLGRNHAACSTDMHKFFVWGSNTFGQLGIPHISSY 647

Query: 341 L-SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ-----AETL 394
           +  P  ++SL    I  +A G WHT+  ++ G V + G    GQLG G  +     ++TL
Sbjct: 648 MPDPYEITSLREANIRSIACGGWHTLISTNTGSVMSCGKGWHGQLGHGDYESLTALSKTL 707

Query: 395 PRLLD-APSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT 453
           P          +     VS G   +A I + G++F WG     QLG     +   P +V 
Sbjct: 708 PYFKKIVEGFGDSFIVKVSAGKESSAAITNKGRLFTWGKGDEYQLGHESSKNEAYPREVE 767

Query: 454 IEGCVP-RNVACGWWHTLLL 472
               +   +V+ G  H L L
Sbjct: 768 FFAKIRVVDVSIGDSHMLAL 787



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 82/169 (48%), Gaps = 3/169 (1%)

Query: 305  IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
            I+     SA +TD+G+L   G   +G+ G G      +P  + SL  ++I  VA G +H 
Sbjct: 1648 ISANSDMSAFVTDSGSLYVSGGSEHGRLGLGHMAPAPTPVEIRSLNTVKIMKVACGTYHC 1707

Query: 365  ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
            + ++ +  VYA+G  ++G  G         P+ L   SL       V  G  H+A ++  
Sbjct: 1708 LALTEEKRVYAWGDGKWGNAGVSNTNDVLEPQELS--SLAACSIIGVHAGGFHSAALSQY 1765

Query: 425  GKVFCWGWNKYGQLGLGDV-IDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
            G +F WG N  GQLGLG      + P++++    V  +V+ G  H+ +L
Sbjct: 1766 GDLFMWGKNSNGQLGLGTTSAAEDSPTKISNLDGVVMDVSLGANHSAVL 1814



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 86/327 (26%), Positives = 130/327 (39%), Gaps = 46/327 (14%)

Query: 76  GQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFG 135
           G  Y  S +  + P+      + S+V  A G     A+T+ G+VYTWG           G
Sbjct: 531 GVEYTRSEESVKHPKRIETLAKMSVVFIACGKDSTAALTDTGKVYTWG-------KSAQG 583

Query: 136 DLSTGTGLDKDVFERQSSFLTEQVSPR--SQVSRSSGGTSSGTDGRGSGEEGSKRRRISL 193
            L  G+G    +   Q   L + +S     Q+S      +  TD       GS       
Sbjct: 584 KLGLGSGKPLAIVVPQ---LVQDLSSHVVCQISLGRNHAACSTDMHKFFVWGSN------ 634

Query: 194 AKQTAESSSSGDENLSAF---PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGE 250
                     G  ++S++   P  +T      I ++A GG HTL  ++ G V   G G  
Sbjct: 635 -----TFGQLGIPHISSYMPDPYEITSLREANIRSIACGGWHTLISTNTGSVMSCGKGWH 689

Query: 251 GQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGR 310
           GQLG G    + +    +P  +                  EG G     +++  ++ G  
Sbjct: 690 GQLGHGDYESLTALSKTLPYFKKIV---------------EGFG----DSFIVKVSAGKE 730

Query: 311 HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
            SA IT+ G L T+G G   Q G  S+ +E  P  V     I++  V+ G  H + +   
Sbjct: 731 SSAAITNKGRLFTWGKGDEYQLGHESSKNEAYPREVEFFAKIRVVDVSIGDSHMLALDYS 790

Query: 371 GDVYAFGGNQFGQLGTGGD-QAETLPR 396
           G  Y++G    GQLG G   + ETLPR
Sbjct: 791 GLPYSWGNGSAGQLGHGEMCERETLPR 817



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 90/195 (46%), Gaps = 26/195 (13%)

Query: 290 SEGPGFRVPGNYVK-GIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS 348
           SEG  + +   Y++  I   G H         +  +G G  G+ G  S + +  P  V +
Sbjct: 69  SEGYDYHMEKRYIRENIELQGSH---------VFMWGDGENGKLGNQSEEIQHVPYIVPA 119

Query: 349 LLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD------------QAETLPR 396
              + ++  A G  HT+ +S+DG V + G N +GQLG G              + ++L +
Sbjct: 120 FRNVLVKVCALGKQHTLFLSADGVVLSCGSNVYGQLGMGDHMLSRSTPVSEPSKQKSLDK 179

Query: 397 LLD-APSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TI 454
           L     SL N+    ++ G  H+  + D GK+F WG   +G+LG+G   +   P  V ++
Sbjct: 180 LQAIIQSLNNI--VGIAAGYYHSLALNDTGKIFSWGSGSWGKLGIGSDANAESPRFVASL 237

Query: 455 EGCVPRNVACGWWHT 469
           +     ++ACG  HT
Sbjct: 238 QNSKVVHIACGAHHT 252



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 100/404 (24%), Positives = 158/404 (39%), Gaps = 64/404 (15%)

Query: 48  DVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGW 107
           D+   GC  ++A++++ K+  +G+         T      IP       ++ ++ A A  
Sbjct: 348 DIDAKGCR-SIALTNTGKVFAFGNE--------TEPHLNRIPRFVAGLPKSDLIIAVART 398

Query: 108 AHC-VAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVS 166
           AH   A+++ G+++ W         R F              E +SS + E       V 
Sbjct: 399 AHFDFAISDTGQLFRW---------RPFSS------------EEESSRMLESFHAIKGVV 437

Query: 167 RSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATV 226
           R   G +       S E G  +  IS  K T+ SS     +L  FP    L P +   T 
Sbjct: 438 RMFCGHNH-MAVICSPEMGCTQAMISRNKSTSFSSDISRASLEKFPSEKIL-PALGTNTE 495

Query: 227 AAGGRHTLALSDI------GQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
                 T+ + D       G ++ +G G  G+LG G  +    S       ES     R 
Sbjct: 496 YLDEFATVQVRDSPSREGDGYIYTYGKGVFGRLGHG--VEYTRSE------ESVKHPKRI 547

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
             L++ SV                IACG   +A +TD G + T+G    G+ G GS    
Sbjct: 548 ETLAKMSV--------------VFIACGKDSTAALTDTGKVYTWGKSAQGKLGLGSGKPL 593

Query: 341 --LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
             + P  V  L    +  ++ G  H  C +     + +G N FGQLG     +  +P   
Sbjct: 594 AIVVPQLVQDLSSHVVCQISLGRNHAACSTDMHKFFVWGSNTFGQLGIP-HISSYMPDPY 652

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGD 442
           +  SL   + +S++CG  HT +  + G V   G   +GQLG GD
Sbjct: 653 EITSLREANIRSIACGGWHTLISTNTGSVMSCGKGWHGQLGHGD 696



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 70/297 (23%), Positives = 115/297 (38%), Gaps = 31/297 (10%)

Query: 206  ENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLG--------S 257
            + L+  P L        + ++A G   + A+S  G+V+ WG G  G+LG          S
Sbjct: 1469 DKLAPTPLLERHKIPPDVKSIACGYTFSAAMSAKGEVFTWGNGESGELGHAPKVLTYAPS 1528

Query: 258  RIRMVSSPHPIPC----IESSYGKDRSAALS-RGSVNSEGPGFRVPGNYVKGIACGGRHS 312
             I+  S    I C    +     K R   +   GS N         G+   G   G   S
Sbjct: 1529 LIKDFSEVVQIACGFKHMAGIVFKPRMKTIELTGSSNIGDNSTTFSGSIAAGSVSGSTRS 1588

Query: 313  AVITDA---------------GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGV 357
                                 G +  +G    GQ G        SP+ + SLL   I  +
Sbjct: 1589 HTTGHHTTRTSAFSASNQKRHGCVFVWGEDTCGQLGIRGLQAARSPSLMQSLLATSIVHI 1648

Query: 358  AAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARH 417
            +A    +  ++  G +Y  GG++ G+LG G       P  ++  SL  V    V+CG  H
Sbjct: 1649 SANSDMSAFVTDSGSLYVSGGSEHGRLGLG--HMAPAPTPVEIRSLNTVKIMKVACGTYH 1706

Query: 418  TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLA 473
               + ++ +V+ WG  K+G  G+ +  D   P ++ ++  C    V  G +H+  L+
Sbjct: 1707 CLALTEEKRVYAWGDGKWGNAGVSNTNDVLEPQELSSLAACSIIGVHAGGFHSAALS 1763



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 75/317 (23%), Positives = 119/317 (37%), Gaps = 66/317 (20%)

Query: 58   MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGG 117
            M ++  R++++WG+  + GQ  +        P+        +  K   G  H  A+ E G
Sbjct: 1284 MTLTSERQVLSWGA-GEFGQLGLDHNLSKGTPQMVKALDGRAPCKILCGGWHSAAILESG 1342

Query: 118  EVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS-PR-SQVSRSSGGTSSG 175
            ++  WG         V+G L  G               T+  S PR +Q  R  G     
Sbjct: 1343 KILLWG-------KNVYGQLGHGD--------------TKSCSAPRVNQYLRLEGKV--- 1378

Query: 176  TDGRGSGEEGSKRRRISLAKQTAESSSSGDENL---------SAFPCLVTLNPGVRIATV 226
               R +G   +    + +A +     S+ D  L            P  +    G  I  V
Sbjct: 1379 ---RTAGLGANHTLVVMVANKVFAMGSNIDGQLGLDDPSRTGKNVPVSIEELNGKNICQV 1435

Query: 227  AAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRG 286
            AAG +H+LALS  G+VW WG    GQLG  +   +     P P +E              
Sbjct: 1436 AAGDQHSLALSVFGEVWSWGGSPFGQLGHET---ITDKLAPTPLLERH------------ 1480

Query: 287  SVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCV 346
                     ++P + VK IACG   SA ++  G + T+G G  G+ G        +P+ +
Sbjct: 1481 ---------KIPPD-VKSIACGYTFSAAMSAKGEVFTWGNGESGELGHAPKVLTYAPSLI 1530

Query: 347  SSLLGIQIEGVAAGLWH 363
                  ++  +A G  H
Sbjct: 1531 KDF--SEVVQIACGFKH 1545



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 101/255 (39%), Gaps = 46/255 (18%)

Query: 33  PLVVRLPLTVGSAWRDVC---GGGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGE 87
           PL + +P  V      V      G   A   +D  K   WGS     LG  +++S     
Sbjct: 592 PLAIVVPQLVQDLSSHVVCQISLGRNHAACSTDMHKFFVWGSNTFGQLGIPHISS----Y 647

Query: 88  IPEPFPLPT--EASIVKAAAGWAHCVAVTEGGEVYT--WGWKECVPSGRV-FGDLSTGTG 142
           +P+P+ + +  EA+I   A G  H +  T  G V +   GW      G++  GD  + T 
Sbjct: 648 MPDPYEITSLREANIRSIACGGWHTLISTNTGSVMSCGKGWH-----GQLGHGDYESLTA 702

Query: 143 LDKDV--FERQSSFLTEQVSPRSQVSRSSGGTSSG---TDGR----GSGEEGSKRRRISL 193
           L K +  F++    + E       V  S+G  SS      GR    G G+E         
Sbjct: 703 LSKTLPYFKK----IVEGFGDSFIVKVSAGKESSAAITNKGRLFTWGKGDE--------- 749

Query: 194 AKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQL 253
             Q    SS  +    A+P  V     +R+  V+ G  H LAL   G  + WG G  GQL
Sbjct: 750 -YQLGHESSKNE----AYPREVEFFAKIRVVDVSIGDSHMLALDYSGLPYSWGNGSAGQL 804

Query: 254 GLGSRIRMVSSPHPI 268
           G G      + P PI
Sbjct: 805 GHGEMCERETLPRPI 819



 Score = 40.4 bits (93), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 48/104 (46%), Gaps = 7/104 (6%)

Query: 31   LSPLVVRLPLTVGSAW--RDVCGGGCGFAM--AISDSRKLITWGSTDDLGQSYVTSGKHG 86
            L   V R  LT   A   R +    CG A   A+S    LITWG+  + GQ  + +G   
Sbjct: 1835 LGDFVDRSTLTAVDALDDRQIVSASCGAAHTAAVSQYGDLITWGNGRN-GQLGLKAGLSK 1893

Query: 87   EIPEPFPLPTEAS--IVKAAAGWAHCVAVTEGGEVYTWGWKECV 128
            +I  P  LP   +  +VK   G    + V+E GE+Y  G++  +
Sbjct: 1894 DIENPVQLPAICNDPMVKVVCGQEVTIVVSEKGELYMAGYESTI 1937


>gi|332235891|ref|XP_003267138.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1 [Nomascus leucogenys]
          Length = 4855

 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 83/244 (34%), Positives = 125/244 (51%), Gaps = 36/244 (14%)

Query: 232  HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
            H++AL++ G+V+ WG G  G+LG G                                NS+
Sbjct: 4092 HSMALTESGEVFSWGDGDYGKLGHG--------------------------------NSD 4119

Query: 292  GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                   G  V  ++CG +HSAV+T  G L TFG G YG+ G G+T ++  P  V++L G
Sbjct: 4120 RQRRPXQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4179

Query: 352  IQIEGVAAGLWHTICISSDGD-VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
             QI  VA GL HT+ +S+DG  V+AFG   +G+LG G   A++ P+ +D   L  +  K 
Sbjct: 4180 YQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDV--LCGIGIKK 4237

Query: 411  VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            V+CG + +  +  DG V+ +G ++   L  G   + N P Q+  + G +  +VA G  HT
Sbjct: 4238 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHT 4297

Query: 470  LLLA 473
            L LA
Sbjct: 4298 LALA 4301



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 107/233 (45%), Gaps = 41/233 (17%)

Query: 242  VWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNY 301
            V+ WG G  GQL    R  MV +                            P F    + 
Sbjct: 3998 VYLWGAGRHGQLAEAGRNVMVPAA--------------------------APSF----SQ 4027

Query: 302  VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
             + + CG   + VI   G +L  G G YG+ GQG++DD      +S+L G  +  +    
Sbjct: 4028 AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSC 4087

Query: 362  ---WHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
                H++ ++  G+V+++G   +G+LG G    +  P        +      +SCG +H+
Sbjct: 4088 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPX-------QGEEVVQMSCGFKHS 4140

Query: 419  AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
            AV+  DGK+F +G   YG+LGLG+  ++ +P +VT +EG     VACG  HTL
Sbjct: 4141 AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTL 4193



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 111/392 (28%), Positives = 163/392 (41%), Gaps = 78/392 (19%)

Query: 41   TVGSAWRDVCGGGCGFAMAISD--------SRKLITWGSTDDLGQSYVTSGKHGEIPEPF 92
            +   A + +CG  C F +  +         S   +  G++DDL    V S   G +    
Sbjct: 4024 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVV--- 4080

Query: 93   PLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQS 152
                   +V +     H +A+TE GEV++WG  +       +G L  G   D+     Q 
Sbjct: 4081 -----TQLVTSCGSDGHSMALTESGEVFSWGDGD-------YGKLGHGNS-DRQRRPXQG 4127

Query: 153  SFLTEQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENL 208
                E+V   S   + S   +S  DG+    G+G+ G    R+ L          G+ + 
Sbjct: 4128 ----EEVVQMSCGFKHSAVVTS--DGKLFTFGNGDYG----RLGL----------GNTSN 4167

Query: 209  SAFPCLVTLNPGVRIATVAAGGRHTLALS-DIGQVWGWGYGGEGQLGLGSRIRMVSSPHP 267
               P  VT   G +I  VA G  HTLA+S D   VW +G G  G+LGLG+     SSP  
Sbjct: 4168 KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK-SSPQK 4226

Query: 268  IPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWG 327
            I  +                           G  +K +ACG + S  +T  G + TFG  
Sbjct: 4227 IDVL--------------------------CGIGIKKVACGTQFSVALTKDGHVYTFGQD 4260

Query: 328  LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG 387
                  +G   +   P  +  L G+ IE VA G  HT+ ++S+GDVYA+G N  GQLG G
Sbjct: 4261 RLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4320

Query: 388  GDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
                   P L+     +NV  + +S G  H+A
Sbjct: 4321 HTNHVREPTLVTGLQGKNV--RQISAGRCHSA 4350



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 132/298 (44%), Gaps = 35/298 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAG---GRHTLALSDIGQVWGWGYGGEGQLGLGSRI- 259
           GD N  +    +T  P   I  V++      HTLA +  G+V+ WG G  G+LG G+   
Sbjct: 438 GDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSST 497

Query: 260 ----RMVSSP---HPIPCIESSY---------------GKDRSAALSRGSVNSEG-PGFR 296
               +++  P     + C+ + Y               G+     L  G  NS   P   
Sbjct: 498 QKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557

Query: 297 VPGNYVKGIACGGRHSAVITDAGALL-TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
              + V  ++CG  H+  ++  G  + +FG G  G+ G G T+    P  + +L G+ I 
Sbjct: 558 KDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIR 617

Query: 356 GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL-PRLLDAPSLENVHSKSVSCG 414
            V AG   ++ ++S G VYA+G      LG G  +A  L P+L++   L       VS G
Sbjct: 618 KVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE--ELAATRIVDVSIG 673

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVI-DRNIPSQVT-IEGCVPRNVACGWWHTL 470
             H   ++ D +V+ WG N  GQ G G+       P +V+ ++G   + ++ G  H+L
Sbjct: 674 DSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 95/174 (54%), Gaps = 5/174 (2%)

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
           + I  G   + VI+  G++   G G YG+ G G ++++ +   ++      I+ V++   
Sbjct: 406 QTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKG 465

Query: 363 ---HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
              HT+  +++G+V+++G   +G+LG G    +  P+L+  P L+      VS G RH+A
Sbjct: 466 SDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCVSAGYRHSA 524

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
            + +DG+++ WG   +G+LG GD   RNIP+ V     V   V+CG  HT+ L+
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG-EVSCGSSHTIALS 577



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 112/251 (44%), Gaps = 31/251 (12%)

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
           T+ AG   T  +S  G V   G G  G+LGLG       S +     + ++   RS    
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLG------DSNNQSTLKKLTFEPHRSIKKV 460

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN 344
             S  S+G                  H+   T  G + ++G G YG+ G G++  +  P 
Sbjct: 461 SSSKGSDG------------------HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPK 502

Query: 345 CVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSL 403
            +   L G  +  V+AG  H+  ++ DG++Y +G   FG+LG G   +  +P L+    +
Sbjct: 503 LIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK--DI 560

Query: 404 ENVHSKSVSCGARHTAVIADDGK-VFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRN 461
            NV    VSCG+ HT  ++ DG+ V+ +G    G+LG GD      P  +  ++G   R 
Sbjct: 561 SNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK 618

Query: 462 VACGWWHTLLL 472
           V  G   +L L
Sbjct: 619 VCAGSQSSLAL 629



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 86/324 (26%), Positives = 130/324 (40%), Gaps = 67/324 (20%)

Query: 52  GGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVK-AAAGWA 108
           G  G  +A +   ++ +WG  D   LG    ++ K+   P+    P +  +V   +AG+ 
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY---PKLIQGPLQGKVVVCVSAGYR 521

Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRS 168
           H  AVTE GE+YTWG  +       FG L  G     D   R    L + +S   +VS  
Sbjct: 522 HSAAVTEDGELYTWGEGD-------FGRLGHG-----DSNSRNIPTLVKDISNVGEVSCG 569

Query: 169 SGGTSS-GTDGR-----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVR 222
           S  T +   DGR     G G+ G                  GD N    P ++    G+ 
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKL--------------GHGDTNRVYKPKVIEALQGMF 615

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V AG + +LAL+  GQV+ WG G    LG GS       P  I              
Sbjct: 616 IRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE------------- 660

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                         +    +  ++ G  H   ++    +  +G    GQCGQG++   ++
Sbjct: 661 -------------ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPIT 707

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTI 365
            P  VS L GI I+ ++AG  H++
Sbjct: 708 KPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 45.4 bits (106), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 4/89 (4%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           +S   +VY +G N   QL  G  +    P+L  APS  +  ++++  G   T VI+ DG 
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKL--APSFSD--AQTIEAGQYCTFVISTDGS 423

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
           V   G   YG+LGLGD  +++   ++T E
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFE 452


>gi|226311363|ref|YP_002771257.1| hypothetical protein BBR47_17760 [Brevibacillus brevis NBRC 100599]
 gi|226094311|dbj|BAH42753.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 323

 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 90/255 (35%), Positives = 126/255 (49%), Gaps = 18/255 (7%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI-----RMVSSPH 266
           P LV    GV    +AAG  H+LAL   G VWGWG+ G+GQLG  +       + V +  
Sbjct: 73  PVLVKGLTGV--TKIAAGSSHSLALKSDGTVWGWGWNGKGQLGNNTTTSSNISKPVQAVG 130

Query: 267 PIPCIESSYGKDRSAALSR-GSV-----NSEGPGFRVPG-NYVKGIACGGRHSAVITDAG 319
               I+ + G     AL + G+V     NS     RV     V+ IA  G H+  +   G
Sbjct: 131 LTDVIDIAAGDAHGLALKKDGTVWIWGSNSTNLPTRVESLTDVRAIAAAGAHNLTVKKDG 190

Query: 320 ALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN 379
            + ++GW  YGQ G  +T  +  P  VS+L    I  VAAG  H++ +  +G VYA+GGN
Sbjct: 191 TVWSWGWNGYGQLGINNTGSKDVPTKVSNLS--NIVSVAAGFHHSLALDVEGKVYAWGGN 248

Query: 380 QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG 439
            +GQ+G G       P  ++ PSL ++   +    + HT  +  DG V+ WG    GQLG
Sbjct: 249 TYGQVGDGTTTQRNAP--VEVPSLVDIVEIASGSYSYHTLALKKDGTVYAWGLGTSGQLG 306

Query: 440 LGDVIDRNIPSQVTI 454
            G   + NIP QV I
Sbjct: 307 NGTTTNSNIPIQVNI 321



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 76/272 (27%), Positives = 119/272 (43%), Gaps = 51/272 (18%)

Query: 208 LSAFPCLV-----TLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMV 262
           L+ F  L+     T   G  I++ AAGG H+L L   G VW WG  G GQLG G+     
Sbjct: 13  LAMFSILILSQETTFAAGNVISS-AAGGSHSLILRSDGTVWAWGNNGNGQLGDGT----- 66

Query: 263 SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL 322
                       + +     L +G               V  IA G  HS  +   G + 
Sbjct: 67  ------------FEQRNEPVLVKGLTG------------VTKIAAGSSHSLALKSDGTVW 102

Query: 323 TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFG 382
            +GW   GQ G  +T        V ++    +  +AAG  H + +  DG V+ +G N   
Sbjct: 103 GWGWNGKGQLGNNTTTSSNISKPVQAVGLTDVIDIAAGDAHGLALKKDGTVWIWGSN--- 159

Query: 383 QLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGD 442
                   +  LP  ++  SL +V  ++++    H   +  DG V+ WGWN YGQLG+ +
Sbjct: 160 --------STNLPTRVE--SLTDV--RAIAAAGAHNLTVKKDGTVWSWGWNGYGQLGINN 207

Query: 443 VIDRNIPSQVTIEGCVPRNVACGWWHTLLLAV 474
              +++P++V+    +  +VA G+ H+L L V
Sbjct: 208 TGSKDVPTKVSNLSNIV-SVAAGFHHSLALDV 238



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 119/306 (38%), Gaps = 61/306 (19%)

Query: 90  EPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFE 149
           EP  +     + K AAG +H +A+   G V+ WGW      G++  + +T + + K V  
Sbjct: 72  EPVLVKGLTGVTKIAAGSSHSLALKSDGTVWGWGWN---GKGQLGNNTTTSSNISKPV-- 126

Query: 150 RQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLS 209
            Q+  LT+ +              +  D  G            LA +   +      N +
Sbjct: 127 -QAVGLTDVIDI------------AAGDAHG------------LALKKDGTVWIWGSNST 161

Query: 210 AFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP 269
             P  V     VR   +AA G H L +   G VW WG+ G GQLG               
Sbjct: 162 NLPTRVESLTDVR--AIAAAGAHNLTVKKDGTVWSWGWNGYGQLG--------------- 204

Query: 270 CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
            I ++  KD    +S  S              +  +A G  HS  +   G +  +G   Y
Sbjct: 205 -INNTGSKDVPTKVSNLS-------------NIVSVAAGFHHSLALDVEGKVYAWGGNTY 250

Query: 330 GQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD 389
           GQ G G+T    +P  V SL+ I      +  +HT+ +  DG VYA+G    GQLG G  
Sbjct: 251 GQVGDGTTTQRNAPVEVPSLVDIVEIASGSYSYHTLALKKDGTVYAWGLGTSGQLGNGTT 310

Query: 390 QAETLP 395
               +P
Sbjct: 311 TNSNIP 316


>gi|118095631|ref|XP_413753.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gallus gallus]
          Length = 4860

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 83/244 (34%), Positives = 127/244 (52%), Gaps = 31/244 (12%)

Query: 232  HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
            H++AL++ G+V+ WG G  G+LG G+  R    P  I  ++                   
Sbjct: 4092 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQ------------------- 4131

Query: 292  GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                   G  V  ++CG +HSAV+T  G L TFG G YG+ G G+T ++  P  V++L G
Sbjct: 4132 -------GEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4184

Query: 352  IQIEGVAAGLWHTICISSDGD-VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
             QI  VA GL HT+ +S+DG  V+AFG   +G+LG G   A++ P+ +D   L  +  K 
Sbjct: 4185 YQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDI--LCGIGIKK 4242

Query: 411  VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            V+CG + +  +  DG V+ +G ++   L  G   + N P QV  + G    ++A G  HT
Sbjct: 4243 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLSGVFIEDIAVGAEHT 4302

Query: 470  LLLA 473
            L L+
Sbjct: 4303 LALS 4306



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 113/233 (48%), Gaps = 36/233 (15%)

Query: 242  VWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNY 301
            V+ WG G  GQL    R  MV    P+                        P F    + 
Sbjct: 3998 VYLWGAGRHGQLAEAGRNVMV----PVA----------------------APSF----SQ 4027

Query: 302  VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
             + + CG   + VI   G +L  G G YG+ GQG++DD      +S+L G  +  +    
Sbjct: 4028 AQQVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSC 4087

Query: 362  ---WHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
                H++ ++  G+V+++G   +G+LG G    +  PR ++A   E V    +SCG +H+
Sbjct: 4088 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEV--VQMSCGFKHS 4145

Query: 419  AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
            AV+  DGK+F +G   YG+LGLG+  ++ +P +VT +EG     VACG  HT+
Sbjct: 4146 AVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTV 4198



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 111/395 (28%), Positives = 161/395 (40%), Gaps = 79/395 (20%)

Query: 41   TVGSAWRDVCGGGCGFAMAISD--------SRKLITWGSTDDLGQSYVTSGKHGEIPEPF 92
            +   A + VCG  C F +  +         S   +  G++DDL    V S   G +    
Sbjct: 4024 SFSQAQQVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVV--- 4080

Query: 93   PLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQS 152
                   +V +     H +A+TE GEV++WG  +       +G L  G   D+    RQ 
Sbjct: 4081 -----TQLVTSCGSDGHSMALTESGEVFSWGDGD-------YGKLGHGNS-DRQRRPRQ- 4126

Query: 153  SFLTEQVSPRSQVSRSSGGTSSGT---DGR----GSGEEGSKRRRISLAKQTAESSSSGD 205
                E +     V  S G   S     DG+    G+G+ G    R+ L          G+
Sbjct: 4127 ---IEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYG----RLGL----------GN 4169

Query: 206  ENLSAFPCLVTLNPGVRIATVAAGGRHTLALS-DIGQVWGWGYGGEGQLGLGSRIRMVSS 264
             +    P  VT   G +I  VA G  HT+A+S D   VW +G G  G+LGLG+     SS
Sbjct: 4170 TSNKKLPERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNSTAK-SS 4228

Query: 265  PHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTF 324
            P  +  +                           G  +K +ACG + S  +T  G + TF
Sbjct: 4229 PQKVDIL--------------------------CGIGIKKVACGTQFSVALTKDGHVYTF 4262

Query: 325  GWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQL 384
            G        +G   +   P  V  L G+ IE +A G  HT+ +SS GDVYA+G N  GQL
Sbjct: 4263 GQDRLIGLPEGRARNHNRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQL 4322

Query: 385  GTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            G G       P L+     +N+  + +S G  H+A
Sbjct: 4323 GLGHTNHVREPTLITVLQGKNI--RQISAGRCHSA 4355



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 95/174 (54%), Gaps = 5/174 (2%)

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
           + I  G   + VI+  G++   G G YG+ G G ++++ +   ++      I+ V++   
Sbjct: 406 QTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKG 465

Query: 363 ---HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
              HT+  +++G+V+++G   +G+LG G    +  P+L+  P L+      VS G RH+A
Sbjct: 466 SDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCVSAGYRHSA 524

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
            + +DG+++ WG   +G+LG GD   RNIP+ V     V   V+CG  HT+ L+
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG-EVSCGSSHTIALS 577



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 132/298 (44%), Gaps = 35/298 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAG---GRHTLALSDIGQVWGWGYGGEGQLGLGSRI- 259
           GD N  +    +T  P   I  V++      HTLA +  G+V+ WG G  G+LG G+   
Sbjct: 438 GDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSST 497

Query: 260 ----RMVSSP---HPIPCIESSY---------------GKDRSAALSRGSVNSEG-PGFR 296
               +++  P     + C+ + Y               G+     L  G  NS   P   
Sbjct: 498 QKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557

Query: 297 VPGNYVKGIACGGRHSAVITDAGALL-TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
              + V  ++CG  H+  ++  G  + +FG G  G+ G G T+    P  + +L G+ I 
Sbjct: 558 KDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIR 617

Query: 356 GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL-PRLLDAPSLENVHSKSVSCG 414
            V AG   ++ ++S G VYA+G      LG G  +A  L P+L++   L       +S G
Sbjct: 618 KVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE--ELAATRIVDISIG 673

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVI-DRNIPSQVT-IEGCVPRNVACGWWHTL 470
             H   ++ D +V+ WG N  GQ G G+       P +V+ ++G   + ++ G  H+L
Sbjct: 674 DSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVSIQQISAGTSHSL 731



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 112/251 (44%), Gaps = 31/251 (12%)

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
           T+ AG   T  +S  G V   G G  G+LGLG       S +     + ++   RS    
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLG------DSNNQSTLKKLTFEPHRSIKKV 460

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN 344
             S  S+G                  H+   T  G + ++G G YG+ G G++  +  P 
Sbjct: 461 SSSKGSDG------------------HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPK 502

Query: 345 CVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSL 403
            +   L G  +  V+AG  H+  ++ DG++Y +G   FG+LG G   +  +P L+    +
Sbjct: 503 LIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK--DI 560

Query: 404 ENVHSKSVSCGARHTAVIADDGK-VFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRN 461
            NV    VSCG+ HT  ++ DG+ V+ +G    G+LG GD      P  +  ++G   R 
Sbjct: 561 SNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK 618

Query: 462 VACGWWHTLLL 472
           V  G   +L L
Sbjct: 619 VCAGSQSSLAL 629



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 86/324 (26%), Positives = 130/324 (40%), Gaps = 67/324 (20%)

Query: 52  GGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVK-AAAGWA 108
           G  G  +A +   ++ +WG  D   LG    ++ K+   P+    P +  +V   +AG+ 
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY---PKLIQGPLQGKVVVCVSAGYR 521

Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRS 168
           H  AVTE GE+YTWG  +       FG L  G     D   R    L + +S   +VS  
Sbjct: 522 HSAAVTEDGELYTWGEGD-------FGRLGHG-----DSNSRNIPTLVKDISNVGEVSCG 569

Query: 169 SGGTSS-GTDGR-----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVR 222
           S  T +   DGR     G G+ G                  GD N    P ++    G+ 
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKL--------------GHGDTNRVYKPKVIEALQGMF 615

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V AG + +LAL+  GQV+ WG G    LG GS       P  I              
Sbjct: 616 IRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE------------- 660

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                         +    +  I+ G  H   ++    +  +G    GQCGQG++   ++
Sbjct: 661 -------------ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPIT 707

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTI 365
            P  VS L G+ I+ ++AG  H++
Sbjct: 708 KPKKVSGLDGVSIQQISAGTSHSL 731



 Score = 45.4 bits (106), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 4/89 (4%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           +S   +VY +G N   QL  G  +    P+L  APS  +  ++++  G   T VI+ DG 
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKL--APSFSD--AQTIEAGQYCTFVISTDGS 423

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
           V   G   YG+LGLGD  +++   ++T E
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFE 452


>gi|428166922|gb|EKX35889.1| hypothetical protein GUITHDRAFT_40307, partial [Guillardia theta
           CCMP2712]
          Length = 277

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 80/235 (34%), Positives = 123/235 (52%), Gaps = 34/235 (14%)

Query: 212 PCLVTLNPGVRIATVAAGG----RHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHP 267
           PC +    G+ + +VA GG    +H+ A+++ GQV+ WG G  GQLG G    +V  P  
Sbjct: 22  PCPIIALQGLLVVSVACGGGSEEQHSAAVTEQGQVYTWGSGKSGQLGHGDSQNLVL-PRL 80

Query: 268 IPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWG 327
           I  ++S                          N +  +ACG  H+ V++ AG +  +GWG
Sbjct: 81  IVGLQS--------------------------NPIVEVACGSAHTVVVSKAGLVFAWGWG 114

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG 387
            +GQ G GST +   P  V+SL G+++  VA G  HT  ++  G VY +G    GQLG G
Sbjct: 115 HFGQLGVGSTHNSNDPVQVTSLDGVKVCKVACGSAHTAVVTESGHVYTWGWGVNGQLGHG 174

Query: 388 GDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD-DGKVFCWGWNKYGQLGLG 441
            D +++ P  +    L  ++  +++CG  HT V+++ D  VF WGW++YGQLG G
Sbjct: 175 DDASQSRPMYV--KKLHGIYVSTLACGLAHTVVVSEVDRAVFSWGWDEYGQLGHG 227



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 116/237 (48%), Gaps = 30/237 (12%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
           GD      P L+       I  VA G  HT+ +S  G V+ WG+G  GQLG+GS     +
Sbjct: 70  GDSQNLVLPRLIVGLQSNPIVEVACGSAHTVVVSKAGLVFAWGWGHFGQLGVGSTH---N 126

Query: 264 SPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLT 323
           S  P+                            + G  V  +ACG  H+AV+T++G + T
Sbjct: 127 SNDPVQVTS------------------------LDGVKVCKVACGSAHTAVVTESGHVYT 162

Query: 324 FGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISS-DGDVYAFGGNQFG 382
           +GWG+ GQ G G    +  P  V  L GI +  +A GL HT+ +S  D  V+++G +++G
Sbjct: 163 WGWGVNGQLGHGDDASQSRPMYVKKLHGIYVSTLACGLAHTVVVSEVDRAVFSWGWDEYG 222

Query: 383 QLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG 439
           QLG GG       +      ++++  + ++CG+ +T  ++  G V+ +GW K GQLG
Sbjct: 223 QLGHGGWDIFGGNKNRSPRPIKDL--QQIACGSSYTLALSSRGDVYAFGWGKDGQLG 277


>gi|327286813|ref|XP_003228124.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1-like [Anolis carolinensis]
          Length = 4963

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 83/244 (34%), Positives = 127/244 (52%), Gaps = 31/244 (12%)

Query: 232  HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
            H++AL++ G+V+ WG G  G+LG G+  R    P  I  ++                   
Sbjct: 4184 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQ------------------- 4223

Query: 292  GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                   G  V  ++CG +HSAV+T  G L TFG G YG+ G G+T ++  P  V++L G
Sbjct: 4224 -------GEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVAALEG 4276

Query: 352  IQIEGVAAGLWHTICISSDGD-VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
             QI  VA GL HT+ +S+DG  V+AFG   +G+LG G   A++ P+ +D   L  +  K 
Sbjct: 4277 YQIGEVACGLNHTLVVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDI--LCGIGIKK 4334

Query: 411  VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            V+CG + +  +  DG V+ +G ++   L  G   + N P QV  + G    ++A G  HT
Sbjct: 4335 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPALSGVFVEDIAVGAEHT 4394

Query: 470  LLLA 473
            L L+
Sbjct: 4395 LALS 4398



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 112/236 (47%), Gaps = 36/236 (15%)

Query: 242  VWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNY 301
            V+ WG G  GQL    R  +   P P  C                               
Sbjct: 4090 VFLWGAGRHGQLAEAGRNAVSPPPSPSFC------------------------------Q 4119

Query: 302  VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
             + + CG   + VI   G +L  G G YG+ GQG++DD      +S+L G  +  +    
Sbjct: 4120 AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSC 4179

Query: 362  ---WHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
                H++ ++  G+V+++G   +G+LG G    +  PR ++A   E V    +SCG +H+
Sbjct: 4180 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEV--VQMSCGFKHS 4237

Query: 419  AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLA 473
            AV+  DGK+F +G   YG+LGLG+  ++ +P +V  +EG     VACG  HTL+++
Sbjct: 4238 AVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVAALEGYQIGEVACGLNHTLVVS 4293



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 108/391 (27%), Positives = 159/391 (40%), Gaps = 79/391 (20%)

Query: 45   AWRDVCGGGCGFAMAISD--------SRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPT 96
            A + +CG  C F +  +         S   +  G++DDL    V S   G +        
Sbjct: 4120 AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVV------- 4172

Query: 97   EASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLT 156
               +V +     H +A+TE GEV++WG  +       +G L  G   D+    RQ     
Sbjct: 4173 -TQLVTSCGSDGHSMALTESGEVFSWGDGD-------YGKLGHGNS-DRQRRPRQ----I 4219

Query: 157  EQVSPRSQVSRSSGGTSSGT---DGR----GSGEEGSKRRRISLAKQTAESSSSGDENLS 209
            E +     V  S G   S     DG+    G+G+ G    R+ L          G+ +  
Sbjct: 4220 EALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYG----RLGL----------GNTSNK 4265

Query: 210  AFPCLVTLNPGVRIATVAAGGRHTLALS-DIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
              P  V    G +I  VA G  HTL +S D   VW +G G  G+LGLG+     SSP  +
Sbjct: 4266 KLPERVAALEGYQIGEVACGLNHTLVVSTDGSMVWAFGDGDYGKLGLGNSTAK-SSPQKV 4324

Query: 269  PCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL 328
              +                           G  +K +ACG + S  +T  G + TFG   
Sbjct: 4325 DIL--------------------------CGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4358

Query: 329  YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGG 388
                 +G   +   P  V +L G+ +E +A G  HT+ +S+ GDVYA+G N  GQLG G 
Sbjct: 4359 LIGLPEGRARNHNRPQQVPALSGVFVEDIAVGAEHTLALSASGDVYAWGSNSEGQLGLGH 4418

Query: 389  DQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
                  P L+   SL+    + +S G  H+A
Sbjct: 4419 TNHVREPTLVT--SLQGKSVRQISAGRCHSA 4447



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 95/174 (54%), Gaps = 5/174 (2%)

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
           + I  G   + VI+  G++   G G YG+ G G ++++ +   ++      I+ V++   
Sbjct: 408 QTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKG 467

Query: 363 ---HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
              HT+  +++G+V+++G   +G+LG G    +  P+L+  P L+      VS G RH+A
Sbjct: 468 SDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCVSAGYRHSA 526

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
            + +DG+++ WG   +G+LG GD   RNIP+ V     V   V+CG  HT+ L+
Sbjct: 527 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNV-GEVSCGSSHTIALS 579



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 132/298 (44%), Gaps = 35/298 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGR---HTLALSDIGQVWGWGYGGEGQLGLGSRI- 259
           GD N  +    +T  P   I  V++      HTLA +  G+V+ WG G  G+LG G+   
Sbjct: 440 GDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSST 499

Query: 260 ----RMVSSP---HPIPCIESSY---------------GKDRSAALSRGSVNSEG-PGFR 296
               +++  P     + C+ + Y               G+     L  G  NS   P   
Sbjct: 500 QKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 559

Query: 297 VPGNYVKGIACGGRHSAVITDAGALL-TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
              + V  ++CG  H+  ++  G  + +FG G  G+ G G T+    P  + +L G+ I 
Sbjct: 560 KDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIR 619

Query: 356 GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL-PRLLDAPSLENVHSKSVSCG 414
            V AG   ++ ++S G VYA+G      LG G  +A  L P+L++   L       +S G
Sbjct: 620 KVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE--ELAATRIVDISIG 675

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVI-DRNIPSQVT-IEGCVPRNVACGWWHTL 470
             H   ++ D +V+ WG N  GQ G G+       P +V+ ++G   + ++ G  H+L
Sbjct: 676 DSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAGTSHSL 733



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 112/251 (44%), Gaps = 31/251 (12%)

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
           T+ AG   T  +S  G V   G G  G+LGLG       S +     + ++   RS    
Sbjct: 409 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLG------DSNNQSTLKKLTFEPHRSIKKV 462

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN 344
             S  S+G                  H+   T  G + ++G G YG+ G G++  +  P 
Sbjct: 463 SSSKGSDG------------------HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPK 504

Query: 345 CVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSL 403
            +   L G  +  V+AG  H+  ++ DG++Y +G   FG+LG G   +  +P L+    +
Sbjct: 505 LIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK--DI 562

Query: 404 ENVHSKSVSCGARHTAVIADDGK-VFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRN 461
            NV    VSCG+ HT  ++ DG+ V+ +G    G+LG GD      P  +  ++G   R 
Sbjct: 563 SNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK 620

Query: 462 VACGWWHTLLL 472
           V  G   +L L
Sbjct: 621 VCAGSQSSLAL 631



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 86/324 (26%), Positives = 130/324 (40%), Gaps = 67/324 (20%)

Query: 52  GGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVK-AAAGWA 108
           G  G  +A +   ++ +WG  D   LG    ++ K+   P+    P +  +V   +AG+ 
Sbjct: 467 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY---PKLIQGPLQGKVVVCVSAGYR 523

Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRS 168
           H  AVTE GE+YTWG  +       FG L  G     D   R    L + +S   +VS  
Sbjct: 524 HSAAVTEDGELYTWGEGD-------FGRLGHG-----DSNSRNIPTLVKDISNVGEVSCG 571

Query: 169 SGGTSS-GTDGR-----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVR 222
           S  T +   DGR     G G+ G                  GD N    P ++    G+ 
Sbjct: 572 SSHTIALSKDGRTVWSFGGGDNGKL--------------GHGDTNRVYKPKVIEALQGMF 617

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V AG + +LAL+  GQV+ WG G    LG GS       P  I              
Sbjct: 618 IRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE------------- 662

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                         +    +  I+ G  H   ++    +  +G    GQCGQG++   ++
Sbjct: 663 -------------ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPIT 709

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTI 365
            P  VS L G+ I+ ++AG  H++
Sbjct: 710 KPKKVSGLDGVAIQQISAGTSHSL 733



 Score = 45.8 bits (107), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 4/89 (4%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           +S   +VY +G N   QL  G  +    P+L  APS  +  ++++  G   T VI+ DG 
Sbjct: 370 VSETCEVYVWGSNSSHQLVEGTQEKILQPKL--APSFSD--AQTIEAGQYCTFVISTDGS 425

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
           V   G   YG+LGLGD  +++   ++T E
Sbjct: 426 VRACGKGSYGRLGLGDSNNQSTLKKLTFE 454



 Score = 40.8 bits (94), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 8/92 (8%)

Query: 362  WHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
            WH   +    DV+ +G  + GQL   G  A + P     PS     ++ V CG   T VI
Sbjct: 4082 WH---LGGKCDVFLWGAGRHGQLAEAGRNAVSPP-----PSPSFCQAQQVICGQNCTFVI 4133

Query: 422  ADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT 453
              +G V   G   YG+LG G+  D ++ + ++
Sbjct: 4134 QANGTVLACGEGSYGRLGQGNSDDLHVLTVIS 4165


>gi|242008674|ref|XP_002425127.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
 gi|212508801|gb|EEB12389.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
          Length = 1044

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 81/254 (31%), Positives = 123/254 (48%), Gaps = 32/254 (12%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
           RI  ++ GG HTLA ++ GQ++GWG    GQLG         +  P+P I  S       
Sbjct: 85  RITKISCGGNHTLAFNEWGQLFGWGSDSHGQLGFNG------TTQPLPKIIKS------- 131

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDE 340
                          +   ++  I+CG  HS  +T+ G L ++G    GQ G G  ++ E
Sbjct: 132 ---------------LATFHIVQISCGKNHSLALTNNGELYSWGGNYDGQLGLGMRSEYE 176

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
             P  + SLLGI I  +A G  H+  +S  G +Y +G N +GQLG   ++ +  P  L  
Sbjct: 177 KQPTLIKSLLGIPIAFIACGSNHSFALSKSGAIYGWGKNTYGQLGLNDEENKLHPTQLK- 235

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVP 459
            +L ++  K ++CG   +A ++ DG VF  G   YGQLG G   +  +P ++  + G   
Sbjct: 236 -TLRSIRVKYIACGEDFSAFLSADGGVFTCGAGMYGQLGHGSTSNEILPRKIMELMGSTV 294

Query: 460 RNVACGWWHTLLLA 473
             V+CG  HTL L 
Sbjct: 295 TQVSCGKRHTLALV 308



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 90/193 (46%), Gaps = 27/193 (13%)

Query: 211 FPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR------MVSS 264
            P ++       I  ++ G  H+LAL++ G+++ WG   +GQLGLG R        ++ S
Sbjct: 125 LPKIIKSLATFHIVQISCGKNHSLALTNNGELYSWGGNYDGQLGLGMRSEYEKQPTLIKS 184

Query: 265 PHPIPCIESSYGKDRSAALSRGS--------------VNSEGPGFR------VPGNYVKG 304
              IP    + G + S ALS+                +N E           +    VK 
Sbjct: 185 LLGIPIAFIACGSNHSFALSKSGAIYGWGKNTYGQLGLNDEENKLHPTQLKTLRSIRVKY 244

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           IACG   SA ++  G + T G G+YGQ G GST +E+ P  +  L+G  +  V+ G  HT
Sbjct: 245 IACGEDFSAFLSADGGVFTCGAGMYGQLGHGSTSNEILPRKIMELMGSTVTQVSCGKRHT 304

Query: 365 I-CISSDGDVYAF 376
           +  + S G VY+F
Sbjct: 305 LALVPSRGRVYSF 317



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 72/147 (48%), Gaps = 6/147 (4%)

Query: 295 FRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQI 354
           F+   N V  +  G  H+ ++T +G + + G     Q G         P  V  L   +I
Sbjct: 30  FKYASN-VSQVTMGENHTVMLTKSGEVFSCGNNDLDQLGHKK--QRTKPEKVEGLDFYRI 86

Query: 355 EGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
             ++ G  HT+  +  G ++ +G +  GQLG  G   + LP+++   SL   H   +SCG
Sbjct: 87  TKISCGGNHTLAFNEWGQLFGWGSDSHGQLGFNG-TTQPLPKIIK--SLATFHIVQISCG 143

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLG 441
             H+  + ++G+++ WG N  GQLGLG
Sbjct: 144 KNHSLALTNNGELYSWGGNYDGQLGLG 170



 Score = 38.1 bits (87), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 98/252 (38%), Gaps = 37/252 (14%)

Query: 50  CGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAH 109
           CGG     +A ++  +L  WGS D  GQ    +G    +P+         IV+ + G  H
Sbjct: 91  CGGN--HTLAFNEWGQLFGWGS-DSHGQLGF-NGTTQPLPKIIKSLATFHIVQISCGKNH 146

Query: 110 CVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSS 169
            +A+T  GE+Y+WG       G   G L  G    +  +E+Q + +           +S 
Sbjct: 147 SLALTNNGELYSWG-------GNYDGQLGLGM---RSEYEKQPTLI-----------KSL 185

Query: 170 GGTSSGTDGRGSGEEGSKRRRISLA---KQTAESSSSGDENLSAFPCLVTLNPGVRIATV 226
            G        GS    +  +  ++    K T       DE     P  +     +R+  +
Sbjct: 186 LGIPIAFIACGSNHSFALSKSGAIYGWGKNTYGQLGLNDEENKLHPTQLKTLRSIRVKYI 245

Query: 227 AAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI------PCIESSYGKDRS 280
           A G   +  LS  G V+  G G  GQLG GS    +  P  I         + S GK  +
Sbjct: 246 ACGEDFSAFLSADGGVFTCGAGMYGQLGHGSTSNEI-LPRKIMELMGSTVTQVSCGKRHT 304

Query: 281 AAL--SRGSVNS 290
            AL  SRG V S
Sbjct: 305 LALVPSRGRVYS 316


>gi|345795569|ref|XP_535652.3| PREDICTED: E3 ISG15--protein ligase HERC5 [Canis lupus familiaris]
          Length = 1263

 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 86/268 (32%), Positives = 125/268 (46%), Gaps = 33/268 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI------PCIESSYG 276
           I  +  G  H+LALS  G+++ WG    GQLG+G     + +P  +      P ++ S G
Sbjct: 379 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRLFTSIPTPQLVEHLSGVPLVQISAG 438

Query: 277 KDRSAALS---------RGSVNSEGPGFR-----------VPGNYVKGIACGGRHSAVIT 316
           K  S ALS         R  +   G G             +    V+ +ACGG H+A++T
Sbjct: 439 KAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQKVEFLACGGSHTALLT 498

Query: 317 DAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD-GDVYA 375
             G + TFG G YGQ G  ST +EL P  V+ L G ++  VA G WHT+   SD G V++
Sbjct: 499 KDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQVACGRWHTLAYVSDLGKVFS 558

Query: 376 FGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKY 435
           FG  + GQLG GG   + +P  +  PS E +  +S +       +   +  +  W   K 
Sbjct: 559 FGSGKEGQLGNGGTHNQLIPLPMKLPSNEELKFESRTSEKELIMIAGGNQSILLWMGKKN 618

Query: 436 GQLGLGDVIDRNIPSQVTIEGCVPRNVA 463
             + L     R IP+    EG V R +A
Sbjct: 619 PYVNL----RRRIPT--LNEGTVKRWIA 640



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 64/168 (38%), Positives = 92/168 (54%), Gaps = 4/168 (2%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL-SPNCVSSLLGIQIEGVAAGLWH 363
           I CG  HS  ++  G L  +G  L+GQ G G     + +P  V  L G+ +  ++AG  H
Sbjct: 382 ITCGDYHSLALSKGGELFAWGQNLHGQLGVGRLFTSIPTPQLVEHLSGVPLVQISAGKAH 441

Query: 364 TICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
           ++ +S  G++Y++G N  GQLG G    E  P L++A  L+N   + ++CG  HTA++  
Sbjct: 442 SMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEA--LDNQKVEFLACGGSHTALLTK 499

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
           DG VF +G  KYGQLG     +   P  VT + G     VACG WHTL
Sbjct: 500 DGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQVACGRWHTL 547



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 88/191 (46%), Gaps = 35/191 (18%)

Query: 100 IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQV 159
           +V+ +AG AH +A++  G +Y+WG  +        G L  G    +D        L E +
Sbjct: 432 LVQISAGKAHSMALSMSGNIYSWGRND-------LGQLGLGHTNGEDF-----PSLIEAL 479

Query: 160 SPRSQVSRSSGGTSSG---TDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFP 212
             +     + GG+ +     DG     G+G+ G          Q   +S+  +      P
Sbjct: 480 DNQKVEFLACGGSHTALLTKDGLVFTFGAGKYG----------QLGHNSTQNELR----P 525

Query: 213 CLVTLNPGVRIATVAAGGRHTLA-LSDIGQVWGWGYGGEGQLGL-GSRIRMVSSPHPIPC 270
            LVT   G R+  VA G  HTLA +SD+G+V+ +G G EGQLG  G+  +++  P  +P 
Sbjct: 526 RLVTELAGNRVTQVACGRWHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPS 585

Query: 271 IESSYGKDRSA 281
            E    + R++
Sbjct: 586 NEELKFESRTS 596



 Score = 47.8 bits (112), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 65/172 (37%), Gaps = 42/172 (24%)

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSD------------------------------- 370
           S  C+     ++I  V  G  H + +SSD                               
Sbjct: 327 SRECIKLGKKMKIHSVDQGAEHMLILSSDGKPFEYNYSIEHARFQCILQEKSIIQITCGD 386

Query: 371 ---------GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
                    G+++A+G N  GQLG  G    ++P       L  V    +S G  H+  +
Sbjct: 387 YHSLALSKGGELFAWGQNLHGQLGV-GRLFTSIPTPQLVEHLSGVPLVQISAGKAHSMAL 445

Query: 422 ADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLL 472
           +  G ++ WG N  GQLGLG     + PS +  ++      +ACG  HT LL
Sbjct: 446 SMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQKVEFLACGGSHTALL 497


>gi|224061683|ref|XP_002192615.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Taeniopygia
            guttata]
          Length = 4864

 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 83/244 (34%), Positives = 127/244 (52%), Gaps = 31/244 (12%)

Query: 232  HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
            H++AL++ G+V+ WG G  G+LG G+  R    P  I  ++                   
Sbjct: 4096 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQ------------------- 4135

Query: 292  GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                   G  V  ++CG +HSAV+T  G L TFG G YG+ G G+T ++  P  V++L G
Sbjct: 4136 -------GEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4188

Query: 352  IQIEGVAAGLWHTICISSDGD-VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
             QI  VA GL HT+ +S+DG  V+AFG   +G+LG G   A++ P+ +D   L  +  K 
Sbjct: 4189 YQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDI--LCGIGIKK 4246

Query: 411  VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            V+CG + +  +  DG V+ +G ++   L  G   + N P QV  + G    ++A G  HT
Sbjct: 4247 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPLLAGVFIEDIAVGAEHT 4306

Query: 470  LLLA 473
            L L+
Sbjct: 4307 LALS 4310



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 112/233 (48%), Gaps = 36/233 (15%)

Query: 242  VWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNY 301
            V+ WG G  GQL    R  M+ +  P                      S  P        
Sbjct: 4002 VYLWGAGRHGQLAEAGRNVMIPAAAP----------------------SFSPA------- 4032

Query: 302  VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
             + + CG   + VI   G +L  G G YG+ GQG++DD      +S+L G  +  +    
Sbjct: 4033 -QQVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSC 4091

Query: 362  ---WHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
                H++ ++  G+V+++G   +G+LG G    +  PR ++A   E V    +SCG +H+
Sbjct: 4092 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEV--VQMSCGFKHS 4149

Query: 419  AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
            AV+  DGK+F +G   YG+LGLG+  ++ +P +VT +EG     VACG  HT+
Sbjct: 4150 AVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTV 4202



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 129/462 (27%), Positives = 181/462 (39%), Gaps = 109/462 (23%)

Query: 14   VFMWG--------------YLPGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMA 59
            V++WG               +P A P  SP               A + VCG  C F + 
Sbjct: 4002 VYLWGAGRHGQLAEAGRNVMIPAAAPSFSP---------------AQQVVCGQNCTFVIQ 4046

Query: 60   ISD--------SRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCV 111
             +         S   +  G++DDL    V S   G +           +V +     H +
Sbjct: 4047 ANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVV--------TQLVTSCGSDGHSM 4098

Query: 112  AVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG 171
            A+TE GEV++WG  +       +G L  G   D+    RQ     E +     V  S G 
Sbjct: 4099 ALTESGEVFSWGDGD-------YGKLGHGNS-DRQRRPRQ----IEALQGEEVVQMSCGF 4146

Query: 172  TSSGT---DGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
              S     DG+    G+G+ G    R+ L          G+ +    P  VT   G +I 
Sbjct: 4147 KHSAVVTADGKLFTFGNGDYG----RLGL----------GNTSNKKLPERVTALEGYQIG 4192

Query: 225  TVAAGGRHTLALS-DIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAAL 283
             VA G  HT+A+S D   VW +G G  G+LGLG+     SSP  +  +            
Sbjct: 4193 QVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNSTAK-SSPQKVDIL------------ 4239

Query: 284  SRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                           G  +K +ACG + S  +T  G + TFG        +G   +   P
Sbjct: 4240 --------------CGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP 4285

Query: 344  NCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSL 403
              V  L G+ IE +A G  HT+ +SS GDVYA+G N  GQLG G       P L+     
Sbjct: 4286 QQVPLLAGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQG 4345

Query: 404  ENVHSKSVSCGARHTAV-IADDGKVFCWGWNKYGQLGLGDVI 444
            +NV  + +S G  H+A   A        G +   QLGL DVI
Sbjct: 4346 KNV--RQISAGRCHSAAWTAPPVPPRAPGVSVPLQLGLPDVI 4385



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 95/174 (54%), Gaps = 5/174 (2%)

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
           + I  G   + VI+  G++   G G YG+ G G ++++ +   ++      I+ V++   
Sbjct: 406 QTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKG 465

Query: 363 ---HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
              HT+  +++G+V+++G   +G+LG G    +  P+L+  P L+      VS G RH+A
Sbjct: 466 SDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCVSAGYRHSA 524

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
            + +DG+++ WG   +G+LG GD   RNIP+ V     V   V+CG  HT+ L+
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIINVG-EVSCGSSHTIALS 577



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/243 (28%), Positives = 113/243 (46%), Gaps = 38/243 (15%)

Query: 204 GDENLSAFPCLVTLNP--GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           G+ +   +P L+   P  G  +  V+AG RH+ A+++ G+++ WG G  G+LG G     
Sbjct: 493 GNSSTQKYPKLIQ-GPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGD---- 547

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
            S+   IP             L +  +N            V  ++CG  H+  ++  G  
Sbjct: 548 -SNSRNIP------------TLVKDIIN------------VGEVSCGSSHTIALSKDGRT 582

Query: 322 L-TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
           + +FG G  G+ G G T+    P  + +L G+ I  V AG   ++ ++S G VYA+G   
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 381 FGQLGTGGDQAETL-PRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG 439
              LG G  +A  L P+L++   L       +S G  H   ++ D +V+ WG N  GQ G
Sbjct: 642 -ACLGCGSSEATALRPKLIE--ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 440 LGD 442
            G+
Sbjct: 699 QGN 701



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 85/324 (26%), Positives = 128/324 (39%), Gaps = 67/324 (20%)

Query: 52  GGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVK-AAAGWA 108
           G  G  +A +   ++ +WG  D   LG    ++ K+   P+    P +  +V   +AG+ 
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY---PKLIQGPLQGKVVVCVSAGYR 521

Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRS 168
           H  AVTE GE+YTWG  +       FG L  G     D   R    L + +    +VS  
Sbjct: 522 HSAAVTEDGELYTWGEGD-------FGRLGHG-----DSNSRNIPTLVKDIINVGEVSCG 569

Query: 169 SGGTSS-GTDGR-----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVR 222
           S  T +   DGR     G G+ G                  GD N    P ++    G+ 
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKL--------------GHGDTNRVYKPKVIEALQGMF 615

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V AG + +LAL+  GQV+ WG G    LG GS       P  I              
Sbjct: 616 IRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE------------- 660

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                         +    +  I+ G  H   ++    +  +G    GQCGQG++   ++
Sbjct: 661 -------------ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPIT 707

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTI 365
            P  V  L GI I+ ++AG  H++
Sbjct: 708 KPKKVGGLDGIAIQQISAGTSHSL 731


>gi|334329483|ref|XP_003341232.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
           [Monodelphis domestica]
          Length = 1170

 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 100/304 (32%), Positives = 146/304 (48%), Gaps = 57/304 (18%)

Query: 213 CLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR--------IRMVSS 264
           C+  L P  ++   A G  HTL  ++ G+V+  G   EGQLGLG          +   ++
Sbjct: 80  CVKALKPE-KVKIAACGRNHTLVYTEEGKVYAAGGNSEGQLGLGDTEERTTFQLVSFFTA 138

Query: 265 PHPIPCIESSYGKDRSAALSRGSV------NSEG------------PGFRVPGNYVKGIA 306
            H I  +  S G + SAAL+   V      NSEG            P     G  +  I+
Sbjct: 139 QHKIKQL--SAGSNTSAALTEDGVLFMWGDNSEGQIGLAEEANVCVPSEVTIGKPISWIS 196

Query: 307 CGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS------LLGI--QIEGVA 358
           CG  HSA +T  G L TFG    G+ G       LSP  + +      +LGI  ++  VA
Sbjct: 197 CGYYHSAFVTTEGELYTFGEPENGKLG-------LSPEQLKNHRIPQLVLGIPGKVNQVA 249

Query: 359 AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAET-LPRLLDAPSLENVHSKSVSCGARH 417
            G  HT+ ++ + +VY FG  QFGQLG G    ET  P+++    L+N   + ++CG  H
Sbjct: 250 CGGGHTVALTEE-EVYTFGLGQFGQLGLGTFIFETSEPKVV--KHLQNQKIQYIACGENH 306

Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC------VPRNVACGWWHTLL 471
           TA+I+D G ++ +G  ++G+LGLG     N  +Q     C      + R VACG  H L+
Sbjct: 307 TALISDTGHMYTFGDGRHGKLGLG---QENFTNQFVPTLCSNFLKFIVRLVACGGCHMLV 363

Query: 472 LAVP 475
            A+P
Sbjct: 364 FAIP 367



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 59/170 (34%), Positives = 94/170 (55%), Gaps = 2/170 (1%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           ++CG  H+A+IT    L  FG   +GQ G GS      P CV +L   +++  A G  HT
Sbjct: 40  LSCGDEHTALITGNSKLYMFGSNNWGQLGLGSKTTVNKPTCVKALKPEKVKIAACGRNHT 99

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           +  + +G VYA GGN  GQLG G  +  T  +L+   + ++   K +S G+  +A + +D
Sbjct: 100 LVYTEEGKVYAAGGNSEGQLGLGDTEERTTFQLVSFFTAQH-KIKQLSAGSNTSAALTED 158

Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAV 474
           G +F WG N  GQ+GL +  +  +PS+VTI G     ++CG++H+  +  
Sbjct: 159 GVLFMWGDNSEGQIGLAEEANVCVPSEVTI-GKPISWISCGYYHSAFVTT 207



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 73/281 (25%), Positives = 133/281 (47%), Gaps = 38/281 (13%)

Query: 224 ATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM-----VSSPHPIPCIESSYGKD 278
           A ++ G  HT  ++   +++ +G    GQLGLGS+  +     V +  P     ++ G++
Sbjct: 38  AYLSCGDEHTALITGNSKLYMFGSNNWGQLGLGSKTTVNKPTCVKALKPEKVKIAACGRN 97

Query: 279 RSAALS-RGSV-----NSEGP---------------GFRVPGNYVKGIACGGRHSAVITD 317
            +   +  G V     NSEG                 F    + +K ++ G   SA +T+
Sbjct: 98  HTLVYTEEGKVYAAGGNSEGQLGLGDTEERTTFQLVSFFTAQHKIKQLSAGSNTSAALTE 157

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
            G L  +G    GQ G     +   P+ V+  +G  I  ++ G +H+  ++++G++Y FG
Sbjct: 158 DGVLFMWGDNSEGQIGLAEEANVCVPSEVT--IGKPISWISCGYYHSAFVTTEGELYTFG 215

Query: 378 GNQFGQLGTGGDQAET--LPRL-LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNK 434
             + G+LG   +Q +   +P+L L  P   N     V+CG  HT  + ++ +V+ +G  +
Sbjct: 216 EPENGKLGLSPEQLKNHRIPQLVLGIPGKVN----QVACGGGHTVALTEE-EVYTFGLGQ 270

Query: 435 YGQLGLGDVIDRNIPSQVT--IEGCVPRNVACGWWHTLLLA 473
           +GQLGLG  I      +V   ++    + +ACG  HT L++
Sbjct: 271 FGQLGLGTFIFETSEPKVVKHLQNQKIQYIACGENHTALIS 311



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 52/108 (48%), Gaps = 25/108 (23%)

Query: 371 GDVYAFGGNQFGQLGTGGDQAETLPRLL----DAPSLENVHSKSVSCGARHTAVIADDGK 426
           G V+ FG ++F         AE +P       D P+        +SCG  HTA+I  + K
Sbjct: 12  GAVFTFGKSKF---------AENIPSKFWLKNDIPAY-------LSCGDEHTALITGNSK 55

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNV---ACGWWHTLL 471
           ++ +G N +GQLGLG     N P+   ++   P  V   ACG  HTL+
Sbjct: 56  LYMFGSNNWGQLGLGSKTTVNKPT--CVKALKPEKVKIAACGRNHTLV 101


>gi|428178045|gb|EKX46922.1| hypothetical protein GUITHDRAFT_86569 [Guillardia theta CCMP2712]
          Length = 306

 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 82/271 (30%), Positives = 133/271 (49%), Gaps = 30/271 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM-V 262
           GDE     P LV    G  +  V+ G +HT  L + G+V+ +G G  GQLG G+ +   V
Sbjct: 22  GDEKTQRQPRLVVAFLGFNVRQVSCGNQHTAILMENGEVFTFGRGNFGQLGQGASVTANV 81

Query: 263 SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL 322
           S+P  +  ++                          G +VK +ACG  H+  + D G L 
Sbjct: 82  STPALVSALQ--------------------------GKHVKQVACGWHHTCALIDNGQLY 115

Query: 323 TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFG 382
           T+G G YG+ G G    + SP  V SL G ++  VAAG +H+  I   G++  +GG  FG
Sbjct: 116 TWGSGEYGRLGHGDEVRQASPKLVESLQGKEVTFVAAGGFHSSVIIEGGNLLTWGGGYFG 175

Query: 383 QLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGD 442
           QLG G +     P+++    ++   +  V+CG  HT ++    +V+ WG  ++G+LG+GD
Sbjct: 176 QLGHGDETDRKTPKMVKG--VQQCIAHEVACGTHHTLMLTQSQEVWTWGSGEFGKLGIGD 233

Query: 443 VIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
                 P  +T ++G    +++ G +H+  L
Sbjct: 234 EEKHAEPIMITALQGVGVIHISTGGFHSAAL 264



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 82/246 (33%), Positives = 118/246 (47%), Gaps = 29/246 (11%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P LV+   G  +  VA G  HT AL D GQ++ WG G  G+LG G  +R  S       +
Sbjct: 84  PALVSALQGKHVKQVACGWHHTCALIDNGQLYTWGSGEYGRLGHGDEVRQASPK----LV 139

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
           ES  GK+                       V  +A GG HS+VI + G LLT+G G +GQ
Sbjct: 140 ESLQGKE-----------------------VTFVAAGGFHSSVIIEGGNLLTWGGGYFGQ 176

Query: 332 CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
            G G   D  +P  V  +       VA G  HT+ ++   +V+ +G  +FG+LG G ++ 
Sbjct: 177 LGHGDETDRKTPKMVKGVQQCIAHEVACGTHHTLMLTQSQEVWTWGSGEFGKLGIGDEEK 236

Query: 392 ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
              P ++ A  L+ V    +S G  H+A +  +G ++ WG    GQLG GD   +NIP  
Sbjct: 237 HAEPIMITA--LQGVGVIHISTGGFHSAALTSEGVLYTWGGGDKGQLGHGDENSQNIPVV 294

Query: 452 VTIEGC 457
           V +  C
Sbjct: 295 VEVISC 300



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 81/153 (52%), Gaps = 1/153 (0%)

Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
           + ++G G+ GQ G G    +  P  V + LG  +  V+ G  HT  +  +G+V+ FG   
Sbjct: 8   VYSWGQGVLGQLGHGDEKTQRQPRLVVAFLGFNVRQVSCGNQHTAILMENGEVFTFGRGN 67

Query: 381 FGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL 440
           FGQLG G      +       +L+  H K V+CG  HT  + D+G+++ WG  +YG+LG 
Sbjct: 68  FGQLGQGASVTANVSTPALVSALQGKHVKQVACGWHHTCALIDNGQLYTWGSGEYGRLGH 127

Query: 441 GDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLL 472
           GD + +  P  V +++G     VA G +H+ ++
Sbjct: 128 GDEVRQASPKLVESLQGKEVTFVAAGGFHSSVI 160



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 76/309 (24%), Positives = 130/309 (42%), Gaps = 54/309 (17%)

Query: 99  SIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQ 158
           ++ + + G  H   + E GEV+T+G          FG L  G  +  +V    +     Q
Sbjct: 40  NVRQVSCGNQHTAILMENGEVFTFGRGN-------FGQLGQGASVTANV-STPALVSALQ 91

Query: 159 VSPRSQVSRSSGGTSSGTDGR-----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPC 213
                QV+     T +  D       GSGE G    R+            GDE   A P 
Sbjct: 92  GKHVKQVACGWHHTCALIDNGQLYTWGSGEYG----RL----------GHGDEVRQASPK 137

Query: 214 LVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES 273
           LV    G  +  VAAGG H+  + + G +  WG G  GQLG G       +P  +  ++ 
Sbjct: 138 LVESLQGKEVTFVAAGGFHSSVIIEGGNLLTWGGGYFGQLGHGDETDR-KTPKMVKGVQQ 196

Query: 274 SYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCG 333
               +                          +ACG  H+ ++T +  + T+G G +G+ G
Sbjct: 197 CIAHE--------------------------VACGTHHTLMLTQSQEVWTWGSGEFGKLG 230

Query: 334 QGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAET 393
            G  +    P  +++L G+ +  ++ G +H+  ++S+G +Y +GG   GQLG G + ++ 
Sbjct: 231 IGDEEKHAEPIMITALQGVGVIHISTGGFHSAALTSEGVLYTWGGGDKGQLGHGDENSQN 290

Query: 394 LPRLLDAPS 402
           +P +++  S
Sbjct: 291 IPVVVEVIS 299



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 100/241 (41%), Gaps = 50/241 (20%)

Query: 29  PILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEI 88
            ++S L  +    V   W   C        A+ D+ +L TWGS +     Y   G   E+
Sbjct: 85  ALVSALQGKHVKQVACGWHHTC--------ALIDNGQLYTWGSGE-----YGRLGHGDEV 131

Query: 89  PEPFPLPTEA----SIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLD 144
            +  P   E+     +   AAG  H   + EGG + TWG       G  FG L  G    
Sbjct: 132 RQASPKLVESLQGKEVTFVAAGGFHSSVIIEGGNLLTWG-------GGYFGQLGHG---- 180

Query: 145 KDVFERQSSFLTEQVSP--RSQVSRSSGGTSSGTDGR-----GSGEEGSKRRRISLAKQT 197
            D  +R++  + + V      +V+  +  T   T  +     GSGE G    ++ +    
Sbjct: 181 -DETDRKTPKMVKGVQQCIAHEVACGTHHTLMLTQSQEVWTWGSGEFG----KLGI---- 231

Query: 198 AESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS 257
                 GDE   A P ++T   GV +  ++ GG H+ AL+  G ++ WG G +GQLG G 
Sbjct: 232 ------GDEEKHAEPIMITALQGVGVIHISTGGFHSAALTSEGVLYTWGGGDKGQLGHGD 285

Query: 258 R 258
            
Sbjct: 286 E 286


>gi|66818759|ref|XP_643039.1| hypothetical protein DDB_G0276695 [Dictyostelium discoideum AX4]
 gi|60471137|gb|EAL69105.1| hypothetical protein DDB_G0276695 [Dictyostelium discoideum AX4]
          Length = 646

 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 87/278 (31%), Positives = 140/278 (50%), Gaps = 39/278 (14%)

Query: 211 FPCLVTLNPGVRIATVAAGGRHTLALSDIGQ-VWGWGYGGEGQLGLGSRIRMVSSPHPIP 269
           FP   T++  + I  +A G  H+LA+++    V+ WG    GQLG G ++   + P  + 
Sbjct: 126 FP---TIDNKIIIKQIACGDSHSLAIAEQPYGVYSWGVNRWGQLGHGDQLNR-NQPTLLS 181

Query: 270 CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
            I S  G   S + S                    +ACG +HS ++++ G L TFG G  
Sbjct: 182 NIGSGSGSGNSISFSM-------------------VACGSQHSMIVSNYGELYTFGCGTT 222

Query: 330 GQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD 389
           G+ G G    +  P  VSSL+G  I  VAAG+ H+ C+ S+G +Y++G N++GQLG G  
Sbjct: 223 GRLGHGDEQPKFKPTPVSSLVGKSIVSVAAGVMHSSCVDSNGKIYSWGWNRYGQLGNGSV 282

Query: 390 QAETLPR--LLDAPSLENVHSK------------SVSCGARHTAVIADDGKVFCWGWNKY 435
           +++TLP       P L ++  +             V CG  HT  ++  G+V  +G+N  
Sbjct: 283 KSQTLPTPPKFQNPKLSDIQQQQQQHHLMKLNFIKVVCGKNHTLALSSSGEVVGFGFNAC 342

Query: 436 GQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GQLG G+ +D+  P ++     V  ++A G++H+L L 
Sbjct: 343 GQLGNGNHMDQLYPVKIEFNEHVI-DIASGYYHSLCLT 379



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 126/286 (44%), Gaps = 53/286 (18%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
           GDE     P  V+   G  I +VAAG  H+  +   G+++ WG+   GQLG GS ++  +
Sbjct: 228 GDEQPKFKPTPVSSLVGKSIVSVAAGVMHSSCVDSNGKIYSWGWNRYGQLGNGS-VKSQT 286

Query: 264 SPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLT 323
            P P P  ++    D      +  +        +  N++K + CG  H+  ++ +G ++ 
Sbjct: 287 LPTP-PKFQNPKLSDIQQQQQQHHL--------MKLNFIK-VVCGKNHTLALSSSGEVVG 336

Query: 324 FGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQ 383
           FG+   GQ G G+  D+L P  V       +  +A+G +H++C++ +G+ Y++G    G 
Sbjct: 337 FGFNACGQLGNGNHMDQLYP--VKIEFNEHVIDIASGYYHSLCLTDNGEAYSWGYMSDGS 394

Query: 384 LGTGGDQA-ETLPRLLDAPSLENVHSKS-------------------------------- 410
           LG G     +T P+L+    + +  + S                                
Sbjct: 395 LGLGEVYTHQTKPKLIPLVHIRHCFTDSNDAFNEIYGRQDENTTQETIDQHKLYLSKKYS 454

Query: 411 -------VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIP 449
                  +S GA ++A+I   GK+FC+G+    + G     D+++P
Sbjct: 455 VGDTVDMISAGAWNSAIITSSGKLFCFGFGDTYRNGNQSEFDQDMP 500



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 89/359 (24%), Positives = 142/359 (39%), Gaps = 75/359 (20%)

Query: 53  GCGFAMAISDSRKLITWG--STDDLGQSYVTSGKHG-EIPEPFPLPTEA----SIVKAAA 105
           G   +M +S+  +L T+G  +T  LG        HG E P+  P P  +    SIV  AA
Sbjct: 201 GSQHSMIVSNYGELYTFGCGTTGRLG--------HGDEQPKFKPTPVSSLVGKSIVSVAA 252

Query: 106 GWAHCVAVTEGGEVYTWGWK------------ECVPSGRVFGD--LSTGTGLDKDVFERQ 151
           G  H   V   G++Y+WGW             + +P+   F +  LS      +     +
Sbjct: 253 GVMHSSCVDSNGKIYSWGWNRYGQLGNGSVKSQTLPTPPKFQNPKLSDIQQQQQQHHLMK 312

Query: 152 SSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAF 211
            +F+         ++ SS G   G      G+ G+                 G+     +
Sbjct: 313 LNFIKVVCGKNHTLALSSSGEVVGFGFNACGQLGN-----------------GNHMDQLY 355

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP-- 269
           P  +  N    +  +A+G  H+L L+D G+ + WGY  +G LGLG      + P  IP  
Sbjct: 356 PVKIEFNE--HVIDIASGYYHSLCLTDNGEAYSWGYMSDGSLGLGEVYTHQTKPKLIPLV 413

Query: 270 ----CIESS-------YGKDRSAALSRGSVNSE----GPGFRVPGNYVKGIACGGRHSAV 314
               C   S       YG+ +    ++ +++         + V G+ V  I+ G  +SA+
Sbjct: 414 HIRHCFTDSNDAFNEIYGR-QDENTTQETIDQHKLYLSKKYSV-GDTVDMISAGAWNSAI 471

Query: 315 ITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDV 373
           IT +G L  FG+G   + G  S  D+  P        I +E    GL     I  D D+
Sbjct: 472 ITSSGKLFCFGFGDTYRNGNQSEFDQDMP--------IIVEPTKWGLERPFNIKEDTDI 522



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 65/113 (57%), Gaps = 10/113 (8%)

Query: 371 GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLEN-VHSKSVSCGARHTAVIADDGK-VF 428
           G VYA+G N FGQ G   +Q   +P  +  P+++N +  K ++CG  H+  IA+    V+
Sbjct: 97  GLVYAWGYNYFGQCGDKTNQTIKVPTSILFPTIDNKIIIKQIACGDSHSLAIAEQPYGVY 156

Query: 429 CWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRN--------VACGWWHTLLLA 473
            WG N++GQLG GD ++RN P+ ++  G    +        VACG  H+++++
Sbjct: 157 SWGVNRWGQLGHGDQLNRNQPTLLSNIGSGSGSGNSISFSMVACGSQHSMIVS 209


>gi|301106605|ref|XP_002902385.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262098259|gb|EEY56311.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 545

 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 87/279 (31%), Positives = 141/279 (50%), Gaps = 31/279 (11%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG----------------LGSRIRMVS-- 263
           RI  +A G  HT+ L++ G+V+ WG G +G+LG                 G  IR V+  
Sbjct: 35  RIVQIACGSGHTVVLTEEGEVYTWGRGDDGRLGHGDNGWKFVPRLVEELRGKNIRQVTCG 94

Query: 264 SPHPIPCIES----SYGKDRSAALSRGSVNSEGPGFRV---PGNYVKGIACGGRHSAVIT 316
           S H      S    ++G      L  G+       + V       V+ +ACG RH+ V+ 
Sbjct: 95  SYHTAAVTVSGDLYTWGGGMYGKLGHGNETGHSTPYLVETLKSMQVRQVACGSRHTVVLL 154

Query: 317 DAGALLTFGWGLYGQCGQGSTD-DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYA 375
           +   + T+G    G  G G T+  +  P  V  L G  I  ++A  +HT  +S  G+V+ 
Sbjct: 155 ENKDVYTWGDKENGVSGHGDTEGHQYLPCPVEELRGKSIVQISACGFHTAALSEFGEVFT 214

Query: 376 FGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKY 435
           FG  +FG+LG   ++ + + R +DA + + V  K V+CG  HTA + + G+V+ WG  ++
Sbjct: 215 FGEGKFGRLGHNSERNQPVARFVDALAGKRV--KQVACGGFHTAAVTETGEVYTWGGGEH 272

Query: 436 GQLGLGDVIDRNIPSQVT--IEGCVPRNVACGWWHTLLL 472
           GQLG GD +++ +P++V   +E  V + + CGW HT+ L
Sbjct: 273 GQLGHGDKVNKTVPTRVESLLEKLVLQ-ITCGWSHTVTL 310



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 118/416 (28%), Positives = 177/416 (42%), Gaps = 59/416 (14%)

Query: 66  LITWGSTDD----LGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYT 121
           + +WG  +D    LG    TS +H   P P     E  IV+ A G  H V +TE GEVYT
Sbjct: 3   VYSWGRGEDGQLGLGD---TSDQHR--PVPIDALAERRIVQIACGSGHTVVLTEEGEVYT 57

Query: 122 WGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGR-G 180
           WG  +    GR+ G    G      + E        QV+  S    ++  T SG     G
Sbjct: 58  WGRGD---DGRL-GHGDNGWKFVPRLVEELRGKNIRQVTCGSY--HTAAVTVSGDLYTWG 111

Query: 181 SGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIG 240
            G  G                  G+E   + P LV     +++  VA G RHT+ L +  
Sbjct: 112 GGMYGKL--------------GHGNETGHSTPYLVETLKSMQVRQVACGSRHTVVLLENK 157

Query: 241 QVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGN 300
            V+ WG    G  G G           +PC                      P   + G 
Sbjct: 158 DVYTWGDKENGVSGHGD----TEGHQYLPC----------------------PVEELRGK 191

Query: 301 YVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAG 360
            +  I+  G H+A +++ G + TFG G +G+ G  S  ++     V +L G +++ VA G
Sbjct: 192 SIVQISACGFHTAALSEFGEVFTFGEGKFGRLGHNSERNQPVARFVDALAGKRVKQVACG 251

Query: 361 LWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            +HT  ++  G+VY +GG + GQLG G    +T+P  ++  SL       ++CG  HT  
Sbjct: 252 GFHTAAVTETGEVYTWGGGEHGQLGHGDKVNKTVPTRVE--SLLEKLVLQITCGWSHTVT 309

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLAVP 475
           + D G+V+ WG   +G+LG  D     +P  V  ++G    +VA    HT+ L  P
Sbjct: 310 LTDTGEVYTWGNGDHGKLGHNDTAKVTLPKPVDVLDGKRVISVASYNEHTVALVDP 365



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 101/378 (26%), Positives = 158/378 (41%), Gaps = 62/378 (16%)

Query: 53  GCGFAMAISDSRKLITWGSTDD--LGQSYVTSGKHGE-----IPEPFPLPTEASIVKAAA 105
           G G  + +++  ++ TWG  DD  LG        HG+     +P         +I +   
Sbjct: 42  GSGHTVVLTEEGEVYTWGRGDDGRLG--------HGDNGWKFVPRLVEELRGKNIRQVTC 93

Query: 106 GWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQV 165
           G  H  AVT  G++YTWG       G ++G L  G            +  + QV   +  
Sbjct: 94  GSYHTAAVTVSGDLYTWG-------GGMYGKLGHGNETGHSTPYLVETLKSMQVRQVACG 146

Query: 166 SRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIAT 225
           SR +       D    G+           K+   S     E     PC V    G  I  
Sbjct: 147 SRHTVVLLENKDVYTWGD-----------KENGVSGHGDTEGHQYLPCPVEELRGKSIVQ 195

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
           ++A G HT ALS+ G+V+ +G G  G+LG                    +  +R+  ++R
Sbjct: 196 ISACGFHTAALSEFGEVFTFGEGKFGRLG--------------------HNSERNQPVAR 235

Query: 286 GSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNC 345
             V++      + G  VK +ACGG H+A +T+ G + T+G G +GQ G G   ++  P  
Sbjct: 236 -FVDA------LAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGHGDKVNKTVPTR 288

Query: 346 VSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLEN 405
           V SLL   +  +  G  HT+ ++  G+VY +G    G+LG       TLP+ +D   L+ 
Sbjct: 289 VESLLEKLVLQITCGWSHTVTLTDTGEVYTWGNGDHGKLGHNDTAKVTLPKPVDV--LDG 346

Query: 406 VHSKSVSCGARHTAVIAD 423
               SV+    HT  + D
Sbjct: 347 KRVISVASYNEHTVALVD 364


>gi|255572207|ref|XP_002527043.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223533605|gb|EEF35343.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1100

 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 68/171 (39%), Positives = 100/171 (58%), Gaps = 4/171 (2%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ IACGGRH+A++T  G + ++G    G+ G G   D L P  + SL  I IE VA G 
Sbjct: 306 VQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDSLSNINIELVACGE 365

Query: 362 WHTICISSDGDVYAFGGN--QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
           +HT  ++  GD+Y +G     FG LG G + +  +P+ ++ P LE +H  S+SCG  HTA
Sbjct: 366 YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGP-LEGIHVSSISCGPWHTA 424

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
           V+   G++F +G   +G LG GD    +IP +V +++G      ACG WHT
Sbjct: 425 VVTSSGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHT 475



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 82/277 (29%), Positives = 121/277 (43%), Gaps = 45/277 (16%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYG--GEGQLGLGSRIRMVSSPHPIP 269
           P L+     + I  VA G  HT A++  G ++ WG G    G LG G+ +      H +P
Sbjct: 347 PKLIDSLSNINIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEV-----SHWVP 401

Query: 270 CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
                             VN  GP   + G +V  I+CG  H+AV+T +G L TFG G +
Sbjct: 402 ----------------KRVN--GP---LEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTF 440

Query: 330 GQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI------------SSDGDVYAFG 377
           G  G G       P  V SL G++    A G+WHT  +             S G ++ +G
Sbjct: 441 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 500

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQ 437
               G+LG G  +A+ +P  + A  L   +   V+CG   T  +   G V+  G   YGQ
Sbjct: 501 DGDKGRLGHGDKEAKLVPTCVAA--LVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQ 558

Query: 438 LGLGDVIDRNIPSQVT--IEGCVPRNVACGWWHTLLL 472
           LG     D  +P++V   +       +ACG +H  +L
Sbjct: 559 LG-NPQADGKLPNRVEGRLSKSFVEEIACGAYHVAVL 594



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 77/144 (53%), Gaps = 6/144 (4%)

Query: 333 GQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAE 392
           G G   D L P  + S + + ++ +A G  H   ++  G+V+++G    G+LG G D   
Sbjct: 285 GFGVKLDSLLPKALESTVVLDVQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDV 344

Query: 393 TLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKY--GQLGLGDVIDRNIPS 450
             P+L+D  SL N++ + V+CG  HT  +   G ++ WG   Y  G LG G+ +   +P 
Sbjct: 345 LHPKLID--SLSNINIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPK 402

Query: 451 QVT--IEGCVPRNVACGWWHTLLL 472
           +V   +EG    +++CG WHT ++
Sbjct: 403 RVNGPLEGIHVSSISCGPWHTAVV 426



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/232 (28%), Positives = 104/232 (44%), Gaps = 45/232 (19%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDI------------GQVWGWGYGGEG 251
           GD    + P  V    G+R    A G  HT A+ ++            G+++ WG G +G
Sbjct: 446 GDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKG 505

Query: 252 QLGLGSR-IRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGR 310
           +LG G +  ++V +     C+         AAL             V  N+ + +ACG  
Sbjct: 506 RLGHGDKEAKLVPT-----CV---------AAL-------------VEPNFCQ-VACGHS 537

Query: 311 HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ-IEGVAAGLWHTICISS 369
            +  +T +G + T G  +YGQ G    D +L PN V   L    +E +A G +H   ++S
Sbjct: 538 LTVALTTSGHVYTMGSPVYGQLGNPQADGKL-PNRVEGRLSKSFVEEIACGAYHVAVLTS 596

Query: 370 DGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
             +VY +G    G+LG G       P L++A  L++   KS++CG   TA I
Sbjct: 597 KTEVYTWGKGANGRLGHGDTDDRNFPSLVEA--LKDKQVKSIACGTNFTAAI 646


>gi|384248236|gb|EIE21721.1| hypothetical protein COCSUDRAFT_83510, partial [Coccomyxa
           subellipsoidea C-169]
          Length = 184

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 75/187 (40%), Positives = 108/187 (57%), Gaps = 22/187 (11%)

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNC--VSSLLGIQIEGVAAG 360
           + +ACG RHS  +T +G L  +G  L+ QCG  S    + P    V+SL G+++  VAAG
Sbjct: 1   RQVACGARHSCALTRSGRLYMWGCNLHDQCGVSSNAGTIVPRPMPVTSLDGLRVTHVAAG 60

Query: 361 LWHTICISSD----GDVYAFGGNQFGQLGTGGDQ-AETLPRLLDAPSLENVHSKSVSCGA 415
           L HTI + +D    G VY +G N+ GQLG G ++   + PRL+++P L + H   V  G+
Sbjct: 61  LSHTI-VCTDAACAGAVYTWGWNKDGQLGHGYNEPGCSRPRLVESPMLADAHVAKVCSGS 119

Query: 416 RHTAVIADDGKVFCWGWNKYGQLGLG-------DVIDRNIPSQVTIEGCVPRNVACGWWH 468
           RH A + + G V+ WGWN +GQLG G        +  +++PS+VT       +V CGWWH
Sbjct: 120 RHCAALTEGGDVYTWGWNAFGQLGSGCKTSSFEPLHVQSLPSKVT-------DVECGWWH 172

Query: 469 TLLLAVP 475
           TL L  P
Sbjct: 173 TLFLLKP 179



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 78/183 (42%), Gaps = 42/183 (22%)

Query: 192 SLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDI---GQVWGWGYG 248
           +L  Q   SS++G   +   P  VT   G+R+  VAAG  HT+  +D    G V+ WG+ 
Sbjct: 25  NLHDQCGVSSNAG--TIVPRPMPVTSLDGLRVTHVAAGLSHTIVCTDAACAGAVYTWGWN 82

Query: 249 GEGQLGLG------SRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYV 302
            +GQLG G      SR R+V SP                               +   +V
Sbjct: 83  KDGQLGHGYNEPGCSRPRLVESP------------------------------MLADAHV 112

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
             +  G RH A +T+ G + T+GW  +GQ G G       P  V SL   ++  V  G W
Sbjct: 113 AKVCSGSRHCAALTEGGDVYTWGWNAFGQLGSGCKTSSFEPLHVQSLPS-KVTDVECGWW 171

Query: 363 HTI 365
           HT+
Sbjct: 172 HTL 174



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 40/86 (46%), Gaps = 11/86 (12%)

Query: 66  LITWGSTDD--LGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
           + TWG   D  LG  Y   G         P+  +A + K  +G  HC A+TEGG+VYTWG
Sbjct: 76  VYTWGWNKDGQLGHGYNEPGCSRPRLVESPMLADAHVAKVCSGSRHCAALTEGGDVYTWG 135

Query: 124 WKECVPSGRVFGDLSTGTGLDKDVFE 149
           W         FG L  G+G     FE
Sbjct: 136 WN-------AFGQL--GSGCKTSSFE 152



 Score = 44.3 bits (103), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 51/219 (23%), Positives = 75/219 (34%), Gaps = 74/219 (33%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTE--ASIVKAAAGWAHC 110
           G   + A++ S +L  WG      Q  V+S     +P P P+ +     +   AAG +H 
Sbjct: 6   GARHSCALTRSGRLYMWGCNLH-DQCGVSSNAGTIVPRPMPVTSLDGLRVTHVAAGLSHT 64

Query: 111 VAVTEG---GEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSR 167
           +  T+    G VYTWGW                   +KD                     
Sbjct: 65  IVCTDAACAGAVYTWGW-------------------NKD--------------------- 84

Query: 168 SSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVA 227
                  G  G G  E G  R R+  +   A++                      +A V 
Sbjct: 85  -------GQLGHGYNEPGCSRPRLVESPMLADA---------------------HVAKVC 116

Query: 228 AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPH 266
           +G RH  AL++ G V+ WG+   GQLG G +       H
Sbjct: 117 SGSRHCAALTEGGDVYTWGWNAFGQLGSGCKTSSFEPLH 155


>gi|405355587|ref|ZP_11024762.1| hypothetical protein A176_0896 [Chondromyces apiculatus DSM 436]
 gi|397091294|gb|EJJ22112.1| hypothetical protein A176_0896 [Myxococcus sp. (contaminant ex DSM
           436)]
          Length = 1473

 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 132/441 (29%), Positives = 190/441 (43%), Gaps = 58/441 (13%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
           G  F +A+     + +WG+ +  GQ  +  G   +   P  +PT + I   AAG  H VA
Sbjct: 225 GFDFTLAVHADGAVSSWGA-NSFGQ--LGLGTFTQRLSPERIPTLSGITSVAAGTYHAVA 281

Query: 113 VTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGT 172
           + + G V+TWG           G L  GT  D+ V     + L      R+  S  +G  
Sbjct: 282 LGKDGTVWTWGSNSS-------GQLGDGTWNDRAV----PAPLPGVGGARAVASLDAGSL 330

Query: 173 SSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGG-R 231
           +          EG     ++     +     GD    + P LV   P +   T   GG +
Sbjct: 331 AL--------LEGGD--VLAWGANNSGQLGDGDTADRSTPSLV---PELSAVTAVVGGAQ 377

Query: 232 HTLALSDIGQVWGWGYGGEGQLGLGSRIRMV----------------SSPHPIPCIES-- 273
           H LAL   G +W WG G  GQLG G   R V                 S H +  +E   
Sbjct: 378 HALALRKDGTLWAWGGGLAGQLGHGGSERHVVPATVMGLTNVTSMATGSFHSLAALEDGS 437

Query: 274 --SYGKDRSAALSRGSVNSEGPGFRVPG-NYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
             ++G++    L  G+V       RVPG   V+ +A  G HS  +   G + T+G    G
Sbjct: 438 VWAWGRNSYGQLGDGTVTERHVPVRVPGLPSVRAVAAAGHHSIAVAMDGTVWTWGRNAAG 497

Query: 331 QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
           Q G G+T D   P  VS L    +  +AAG  H + + SDGDV+A+G N  GQLG G   
Sbjct: 498 QLGDGTTRDRARPVAVSGL--TSVLAIAAGGSHVLALRSDGDVWAWGYNALGQLGDGTSG 555

Query: 391 AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
            +  P  +  P L  +  +SV+ G   +  +A+DG V+ WG    GQLG G  + R  P 
Sbjct: 556 DKLTP--VRVPGLAPI--QSVAAGTYFSMALANDGTVWTWGEGFEGQLGDGGGVQRLSP- 610

Query: 451 QVTIEGCVP-RNVACGWWHTL 470
            V ++G    RN++ G  H L
Sbjct: 611 -VAVKGLSDIRNISVGSAHAL 630



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/247 (32%), Positives = 111/247 (44%), Gaps = 28/247 (11%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES------------ 273
           +AAG +H+L L+  G VW WG    GQLG         SP  +P +E             
Sbjct: 71  IAAGAQHSLFLTPTGAVWAWGGNSAGQLGGADTSFQRLSPARLPVLEDIVSVVSGDAHSL 130

Query: 274 ---------SYGKDRSAALSRGSVNSEGPGFRVPG-NYVKGIACGGRHSAVITDAGALLT 323
                    ++G + S  L  G+        RV G   V  +A G  HS V+   G +  
Sbjct: 131 ALGADGTVWTWGSNSSGQLGDGTTTDRAEPQRVEGFTDVVAVAAGDFHSLVLKSDGTVWA 190

Query: 324 FGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQ 383
           +G   +GQ GQG T   L P  V  L G+    +AAG   T+ + +DG V ++G N FGQ
Sbjct: 191 WGTNFHGQLGQGHTQTGLWPKPVPGLEGVVA--LAAGFDFTLAVHADGAVSSWGANSFGQ 248

Query: 384 LGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDV 443
           LG G       P  +  P+L  +   SV+ G  H   +  DG V+ WG N  GQLG G  
Sbjct: 249 LGLGTFTQRLSPERI--PTLSGI--TSVAAGTYHAVALGKDGTVWTWGSNSSGQLGDGTW 304

Query: 444 IDRNIPS 450
            DR +P+
Sbjct: 305 NDRAVPA 311



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 128/447 (28%), Positives = 188/447 (42%), Gaps = 64/447 (14%)

Query: 52  GGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCV 111
           GG   A+A+     L  WG        +  S +H     P  +    ++   A G  H +
Sbjct: 374 GGAQHALALRKDGTLWAWGGGLAGQLGHGGSERH---VVPATVMGLTNVTSMATGSFHSL 430

Query: 112 AVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFER---QSSFLTEQVSPRSQVSRS 168
           A  E G V+ WG          +G L  GT  ++ V  R     S      +    ++ +
Sbjct: 431 AALEDGSVWAWGRNS-------YGQLGDGTVTERHVPVRVPGLPSVRAVAAAGHHSIAVA 483

Query: 169 SGGT--SSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATV 226
             GT  + G +  G   +G+ R R                   A P  V ++    +  +
Sbjct: 484 MDGTVWTWGRNAAGQLGDGTTRDR-------------------ARP--VAVSGLTSVLAI 522

Query: 227 AAGGRHTLALSDIGQVWGWGYGGEGQLGLGS---RIRMVSSPHPIPCIESSYGKDRSAAL 283
           AAGG H LAL   G VW WGY   GQLG G+   ++  V  P   P    + G   S AL
Sbjct: 523 AAGGSHVLALRSDGDVWAWGYNALGQLGDGTSGDKLTPVRVPGLAPIQSVAAGTYFSMAL 582

Query: 284 SR-GSVNSEGPGF-----------RVPGNYVKG------IACGGRHSAVITDAGALLTFG 325
           +  G+V + G GF           R+    VKG      I+ G  H+  +   G +  +G
Sbjct: 583 ANDGTVWTWGEGFEGQLGDGGGVQRLSPVAVKGLSDIRNISVGSAHALAVRGDGTVWAWG 642

Query: 326 WGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLG 385
               GQ G GS  D  +P  V +L GI    V+ G  H++ + +DG V A+G N +GQLG
Sbjct: 643 DNNEGQLGDGSWMDRFAPVQVRNLTGITA--VSGGRSHSLALHADGTVRAWGSNGYGQLG 700

Query: 386 TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVID 445
            G   +  LP ++  P L  +  +++  G  H   +  D  +  WG+N++GQLGLG    
Sbjct: 701 DGTLTSRVLPSVI--PGLSGI--QALHPGHLHVLALHADKTLRGWGYNRFGQLGLGAAGW 756

Query: 446 RNIPSQVTIEGCVPRNVACGWWHTLLL 472
              P QV   G V R +A G  H LL+
Sbjct: 757 SARPVQVRGIGRVER-LAAGRAHALLV 782



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 120/416 (28%), Positives = 179/416 (43%), Gaps = 67/416 (16%)

Query: 91  PFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFER 150
           P  LP    IV   +G AH +A+   G V+TWG           G L  GT  D+   +R
Sbjct: 110 PARLPVLEDIVSVVSGDAHSLALGADGTVWTWGSNSS-------GQLGDGTTTDRAEPQR 162

Query: 151 QSSFLTEQVSP-----RSQVSRSSGGTSS-GTDGRGSGEEGSKRRRISLAKQTAESSSSG 204
              F T+ V+       S V +S G   + GT+  G   +G  +  +             
Sbjct: 163 VEGF-TDVVAVAAGDFHSLVLKSDGTVWAWGTNFHGQLGQGHTQTGL------------- 208

Query: 205 DENLSAFPCLVTLNPGVR-IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
                 +P  V   PG+  +  +AAG   TLA+   G V  WG    GQLGLG+  + +S
Sbjct: 209 ------WPKPV---PGLEGVVALAAGFDFTLAVHADGAVSSWGANSFGQLGLGTFTQRLS 259

Query: 264 SPHPIPCIES---------------------SYGKDRSAALSRGSVNSEGPGFRVPG-NY 301
            P  IP +                       ++G + S  L  G+ N       +PG   
Sbjct: 260 -PERIPTLSGITSVAAGTYHAVALGKDGTVWTWGSNSSGQLGDGTWNDRAVPAPLPGVGG 318

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
            + +A     S  + + G +L +G    GQ G G T D  +P+ V  L    +  V  G 
Sbjct: 319 ARAVASLDAGSLALLEGGDVLAWGANNSGQLGDGDTADRSTPSLVPEL--SAVTAVVGGA 376

Query: 362 WHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
            H + +  DG ++A+GG   GQLG GG +   +P  +    L NV   S++ G+ H+   
Sbjct: 377 QHALALRKDGTLWAWGGGLAGQLGHGGSERHVVPATV--MGLTNV--TSMATGSFHSLAA 432

Query: 422 ADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAVPPT 477
            +DG V+ WG N YGQLG G V +R++P +V     V R VA    H++ +A+  T
Sbjct: 433 LEDGSVWAWGRNSYGQLGDGTVTERHVPVRVPGLPSV-RAVAAAGHHSIAVAMDGT 487



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 88/261 (33%), Positives = 118/261 (45%), Gaps = 26/261 (9%)

Query: 223  IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS--------RIRMVSSPHPIPCIES- 273
            I  VA GG  +LAL   G VW WG    GQ+G G+        RI  +S    I   ES 
Sbjct: 869  IVAVAGGGDTSLALRSDGTVWAWGANASGQVGDGTVEDRLTPRRIEALSDVMVIALGESH 928

Query: 274  -----------SYGKDRSAALSRGSVNSEGPGFRVPG-NYVKGIACGGRHSAVITDAGAL 321
                       ++G + S  L  G         RV G   V  +A G   S  + D G  
Sbjct: 929  ALAVGEDGTVWAWGANASGQLGDGGETPSLLPARVKGLEGVGSVAAGRAFSLAVRDDGTA 988

Query: 322  LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
              +G    GQ G GS      P+ V+S+ G++   V+AG  H + +  DG V+A+G N  
Sbjct: 989  WAWGANESGQLGDGSNQSRRVPHRVASVKGLRA--VSAGAHHAMALGEDGAVWAWGDNTL 1046

Query: 382  GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
            GQLG G   A T+        L +V  +SV+ G + +  +A DG  F WG N+YGQLG G
Sbjct: 1047 GQLGDG-TSAFTVMWPQRVAELSDV--ESVAAGEQFSVAVAHDGTAFSWGSNEYGQLGDG 1103

Query: 442  DVIDRNIPSQVTIEGCVPRNV 462
                R  P++V I G   R V
Sbjct: 1104 KTGPRLSPAEVKIGGSKARTV 1124



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 86/289 (29%), Positives = 130/289 (44%), Gaps = 37/289 (12%)

Query: 211  FPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPC 270
             P  V    G+R   V+AG  H +AL + G VW WG    GQLG G+    V  P  +  
Sbjct: 1009 VPHRVASVKGLR--AVSAGAHHAMALGEDGAVWAWGDNTLGQLGDGTSAFTVMWPQRVAE 1066

Query: 271  IES----SYGKDRSAALSR------------GSVNSEGPGFRVPGNYVK----------G 304
            +      + G+  S A++             G +     G R+    VK           
Sbjct: 1067 LSDVESVAAGEQFSVAVAHDGTAFSWGSNEYGQLGDGKTGPRLSPAEVKIGGSKARTVVT 1126

Query: 305  IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
            +   G+H+  +   G L  +G    GQ G G+T    SP  +  +   ++  V+ G WH+
Sbjct: 1127 VGAWGQHAVALMADGTLQAWGDNATGQLGDGTTTRRSSPGEIRGV--TRVTAVSTGAWHS 1184

Query: 365  ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
            + +  DG V+A+G N FGQLG G   A  +P  +    L +V   +++ G  H+  +  D
Sbjct: 1185 LALRLDGTVWAWGANGFGQLGDGTTTARAVP--VPVQGLRDV--VAIAAGGYHSVAVRSD 1240

Query: 425  GKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLL 472
            G V+ WG+N +GQLG G    R +P QV  +EG   + V  G  H+L L
Sbjct: 1241 GTVWTWGYNTFGQLGDGTSESRALPVQVHKLEGV--QAVTGGDHHSLAL 1287



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 121/444 (27%), Positives = 179/444 (40%), Gaps = 69/444 (15%)

Query: 27   RSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHG 86
             +P L P  V+    VGS        G  F++A+ D      WG+ +  GQ  +  G + 
Sbjct: 954  ETPSLLPARVKGLEGVGS-----VAAGRAFSLAVRDDGTAWAWGANES-GQ--LGDGSNQ 1005

Query: 87   EIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKD 146
                P  + +   +   +AG  H +A+ E G V+ WG           G L  GT     
Sbjct: 1006 SRRVPHRVASVKGLRAVSAGAHHAMALGEDGAVWAWG-------DNTLGQLGDGTSAFTV 1058

Query: 147  VFERQSSFLT--EQVSPRSQ----VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAES 200
            ++ ++ + L+  E V+   Q    V+      S G++  G   +G    R+S A+     
Sbjct: 1059 MWPQRVAELSDVESVAAGEQFSVAVAHDGTAFSWGSNEYGQLGDGKTGPRLSPAEVKIGG 1118

Query: 201  SSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR 260
            S +                   + TV A G+H +AL   G +  WG    GQLG G+  R
Sbjct: 1119 SKA-----------------RTVVTVGAWGQHAVALMADGTLQAWGDNATGQLGDGTTTR 1161

Query: 261  MVSSPHPIPCIES---------------------SYGKDRSAALSRGSVNSEGPGFRVPG 299
              SSP  I  +                       ++G +    L  G+  +      V G
Sbjct: 1162 R-SSPGEIRGVTRVTAVSTGAWHSLALRLDGTVWAWGANGFGQLGDGTTTARAVPVPVQG 1220

Query: 300  -NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
               V  IA GG HS  +   G + T+G+  +GQ G G+++    P  V  L G+Q   V 
Sbjct: 1221 LRDVVAIAAGGYHSVAVRSDGTVWTWGYNTFGQLGDGTSESRALPVQVHKLEGVQA--VT 1278

Query: 359  AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLP-RLLDAPSLENVHSKSVSCGARH 417
             G  H++ + +DG V  +G N  GQLG G       P RL D   L  V       GA H
Sbjct: 1279 GGDHHSLALHADGTVSGWGHNASGQLGDGSRTDRYTPVRLKDVDGLTEVR-----AGAAH 1333

Query: 418  TAVIADDGKVFCWGWNKYGQLGLG 441
            T  +  DG V+ WG N +GQLG G
Sbjct: 1334 TVALGKDGTVWTWGDNAHGQLGDG 1357



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 124/273 (45%), Gaps = 30/273 (10%)

Query: 222  RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR--MVSSPHPIPCIES------ 273
            R+  +AAG  H L +   G V  WG    GQLG G         +   + C  S      
Sbjct: 768  RVERLAAGRAHALLVRADGSVVAWGANASGQLGDGGTTHGARAVTVRGVSCARSVASGGQ 827

Query: 274  ------------SYGKDRSAALSRGSVNSEGPGFRVPG-NYVKGIACGGRHSAVITDAGA 320
                        ++G+++   L  G+ ++     RV G   +  +A GG  S  +   G 
Sbjct: 828  HSLVLACDGTVWTWGENQRGQLGDGTTSARVAPGRVEGLEGIVAVAGGGDTSLALRSDGT 887

Query: 321  LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
            +  +G    GQ G G+ +D L+P  + +L  + +  +A G  H + +  DG V+A+G N 
Sbjct: 888  VWAWGANASGQVGDGTVEDRLTPRRIEALSDVMV--IALGESHALAVGEDGTVWAWGANA 945

Query: 381  FGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL 440
             GQLG GG+    LP  +    LE V   SV+ G   +  + DDG  + WG N+ GQLG 
Sbjct: 946  SGQLGDGGETPSLLPARVKG--LEGV--GSVAAGRAFSLAVRDDGTAWAWGANESGQLGD 1001

Query: 441  GDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLL 472
            G    R +P +V +++G   R V+ G  H + L
Sbjct: 1002 GSNQSRRVPHRVASVKGL--RAVSAGAHHAMAL 1032



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 119/429 (27%), Positives = 179/429 (41%), Gaps = 62/429 (14%)

Query: 56  FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTE 115
            ++A++    + TWG  +  GQ  +  G   +   P  +    S++  AAG +H +A+  
Sbjct: 478 HSIAVAMDGTVWTWGR-NAAGQ--LGDGTTRDRARPVAVSGLTSVLAIAAGGSHVLALRS 534

Query: 116 GGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSG 175
            G+V+ WG+          G L  GT  DK    R       Q    S  + +    +  
Sbjct: 535 DGDVWAWGYN-------ALGQLGDGTSGDKLTPVRVPGLAPIQ----SVAAGTYFSMALA 583

Query: 176 TDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGR 231
            DG     G G EG                  G + LS  P  V     +R   ++ G  
Sbjct: 584 NDGTVWTWGEGFEGQL------------GDGGGVQRLS--PVAVKGLSDIR--NISVGSA 627

Query: 232 HTLALSDIGQVWGWGYGGEGQLGLGS---RIRMVSSPHPIPCIESSYGKDRSAAL-SRGS 287
           H LA+   G VW WG   EGQLG GS   R   V   +       S G+  S AL + G+
Sbjct: 628 HALAVRGDGTVWAWGDNNEGQLGDGSWMDRFAPVQVRNLTGITAVSGGRSHSLALHADGT 687

Query: 288 VNSEGP-GF---------------RVPG-NYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
           V + G  G+                +PG + ++ +  G  H   +     L  +G+  +G
Sbjct: 688 VRAWGSNGYGQLGDGTLTSRVLPSVIPGLSGIQALHPGHLHVLALHADKTLRGWGYNRFG 747

Query: 331 QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
           Q G G+      P  V  +   ++E +AAG  H + + +DG V A+G N  GQLG GG  
Sbjct: 748 QLGLGAAGWSARPVQVRGI--GRVERLAAGRAHALLVRADGSVVAWGANASGQLGDGGTT 805

Query: 391 AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
                  +   S     ++SV+ G +H+ V+A DG V+ WG N+ GQLG G    R  P 
Sbjct: 806 HGARAVTVRGVSC----ARSVASGGQHSLVLACDGTVWTWGENQRGQLGDGTTSARVAPG 861

Query: 451 QVT-IEGCV 458
           +V  +EG V
Sbjct: 862 RVEGLEGIV 870



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 73/275 (26%), Positives = 110/275 (40%), Gaps = 31/275 (11%)

Query: 204  GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLG---SRIR 260
            GD   +A    V +     +  +AAGG H++A+   G VW WGY   GQLG G   SR  
Sbjct: 1205 GDGTTTARAVPVPVQGLRDVVAIAAGGYHSVAVRSDGTVWTWGYNTFGQLGDGTSESRAL 1264

Query: 261  MVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKG---------------- 304
             V   H +  +++  G D  +          G G    G    G                
Sbjct: 1265 PVQV-HKLEGVQAVTGGDHHSLALHADGTVSGWGHNASGQLGDGSRTDRYTPVRLKDVDG 1323

Query: 305  ---IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAA 359
               +  G  H+  +   G + T+G   +GQ G G T     L P  VS L       + A
Sbjct: 1324 LTEVRAGAAHTVALGKDGTVWTWGDNAHGQLGDGVTGPRMRLVPKPVSGL--PAATAIGA 1381

Query: 360  GLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            G WH+     +   + +G N  GQLG G +     P+ +   S      K ++ GA  + 
Sbjct: 1382 GAWHSFASGPEEGAFTWGRNSHGQLGVGDNAPRAEPQRMKLLS----GLKVIAGGADTSL 1437

Query: 420  VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI 454
             +  +G +  WG + +G LGLG +  R  P +V +
Sbjct: 1438 AMTQEGVLMSWGSSLHGTLGLGVLGQRASPGRVLL 1472



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 49/119 (41%), Positives = 66/119 (55%), Gaps = 10/119 (8%)

Query: 357 VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA--PSLENVHSKSVSCG 414
           +AAG  H++ ++  G V+A+GGN  GQLG G D   +  RL  A  P LE++   SV  G
Sbjct: 71  IAAGAQHSLFLTPTGAVWAWGGNSAGQLG-GAD--TSFQRLSPARLPVLEDI--VSVVSG 125

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVP-RNVACGWWHTLLL 472
             H+  +  DG V+ WG N  GQLG G   DR  P +V  EG      VA G +H+L+L
Sbjct: 126 DAHSLALGADGTVWTWGSNSSGQLGDGTTTDRAEPQRV--EGFTDVVAVAAGDFHSLVL 182


>gi|159039902|ref|YP_001539155.1| chromosome condensation regulator RCC1 [Salinispora arenicola
           CNS-205]
 gi|157918737|gb|ABW00165.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
           CNS-205]
          Length = 546

 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 123/423 (29%), Positives = 171/423 (40%), Gaps = 63/423 (14%)

Query: 63  SRKLITWGST--DDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVY 120
           S  ++ WGS    +LG    T   +   P    LP + + V  AAG AH VA+T  G V 
Sbjct: 53  SDTILAWGSNFFGELGNGTTT---NSSTPVDVSLPADTAAVAIAAGDAHSVALTAAGTVL 109

Query: 121 TWGWKECVPSGRVFGDLSTGTGLDKDV---FERQSSFLTEQVSP--RSQVSRSSGGTSSG 175
            WG           G L  GTG D          +      V+      V+ +S GT   
Sbjct: 110 AWGDNS-------HGQLGDGTGADSLTPVGVSLPAGVTASAVAAGRDHSVALTSAGTVLA 162

Query: 176 TDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLA 235
             G   G+ G                  G     + P  V L P   +  VAAG  H++A
Sbjct: 163 WGGNSFGQLGD-----------------GTVVDRSTPVAVALPPSTTVTAVAAGATHSVA 205

Query: 236 LSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF 295
           L+  G V  WG    GQLG G+ +                  DRS  ++           
Sbjct: 206 LTSAGTVLAWGGNPFGQLGDGTVV------------------DRSTPVAVA--------- 238

Query: 296 RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
             P   V  +A GG HS  +T AG +L +G   +GQ G G+  D  +P  VS   G+   
Sbjct: 239 LPPSTTVTAVAAGGNHSVALTSAGTVLAWGRNFFGQLGDGTVVDRSTPTVVSLPAGVTAS 298

Query: 356 GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGA 415
            VAAG  H++ +++ G V A+G N FGQLG G     + P  +  P+   + + S    +
Sbjct: 299 AVAAGRIHSLALTTAGGVLAWGNNTFGQLGDGTTTTSSTPVSVTLPAATTITAISAR-DS 357

Query: 416 RHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACGWWHTLLLAV 474
           +H+  +   G    WG N  GQLG G    R+ P  V +  G     +A G  H+L L  
Sbjct: 358 QHSVAMTSAGAALSWGRNLRGQLGDGTTTTRSTPVDVHLPTGVTVTAIAAGDDHSLALTA 417

Query: 475 PPT 477
           PPT
Sbjct: 418 PPT 420



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 86/339 (25%), Positives = 140/339 (41%), Gaps = 49/339 (14%)

Query: 31  LSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPE 90
           L+P+ V LP  V ++       G   ++A++ +  ++ WG  +  GQ    +      P 
Sbjct: 128 LTPVGVSLPAGVTAS---AVAAGRDHSVALTSAGTVLAWGG-NSFGQLGDGTVVDRSTPV 183

Query: 91  PFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFER 150
              LP   ++   AAG  H VA+T  G V  WG       G  FG L  GT +D+     
Sbjct: 184 AVALPPSTTVTAVAAGATHSVALTSAGTVLAWG-------GNPFGQLGDGTVVDR----- 231

Query: 151 QSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSA 210
            S+ +   + P + V+  + G      G  S    S    ++  +        G     +
Sbjct: 232 -STPVAVALPPSTTVTAVAAG------GNHSVALTSAGTVLAWGRNFFGQLGDGTVVDRS 284

Query: 211 FPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPC 270
            P +V+L  GV  + VAAG  H+LAL+  G V  WG    GQLG G+             
Sbjct: 285 TPTVVSLPAGVTASAVAAGRIHSLALTTAGGVLAWGNNTFGQLGDGTTTTS--------- 335

Query: 271 IESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
             +       AA +  ++++                   +HS  +T AGA L++G  L G
Sbjct: 336 -STPVSVTLPAATTITAISAR----------------DSQHSVAMTSAGAALSWGRNLRG 378

Query: 331 QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISS 369
           Q G G+T    +P  V    G+ +  +AAG  H++ +++
Sbjct: 379 QLGDGTTTTRSTPVDVHLPTGVTVTAIAAGDDHSLALTA 417


>gi|326926479|ref|XP_003209427.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Meleagris
            gallopavo]
          Length = 4334

 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 83/244 (34%), Positives = 126/244 (51%), Gaps = 31/244 (12%)

Query: 232  HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
            H++AL++ G+V+ WG G  G+LG G+  R    P  I  ++                   
Sbjct: 3566 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQ------------------- 3605

Query: 292  GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                   G  V  ++CG +HSAV+T  G L TFG G YG+ G G+T ++  P  V++L G
Sbjct: 3606 -------GEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 3658

Query: 352  IQIEGVAAGLWHTICISSDGD-VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
             QI  VA GL HT+ +S DG  V+AFG   +G+LG G   A++ P+ +D   L  +  K 
Sbjct: 3659 YQIGQVACGLNHTVAVSMDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDI--LCGIGIKK 3716

Query: 411  VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            V+CG + +  +  DG V+ +G ++   L  G   + N P QV  + G    ++A G  HT
Sbjct: 3717 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLSGVFIEDIAVGAEHT 3776

Query: 470  LLLA 473
            L L+
Sbjct: 3777 LALS 3780



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 116/237 (48%), Gaps = 36/237 (15%)

Query: 242  VWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNY 301
            V+ WG G  GQL    R  MV    P+                        P F    + 
Sbjct: 3472 VYLWGAGRHGQLAEAGRNVMV----PVA----------------------APSF----SQ 3501

Query: 302  VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
             + + CG   + VI   G +L  G G YG+ GQG++DD      +S+L G  +  +    
Sbjct: 3502 AQQVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSC 3561

Query: 362  ---WHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
                H++ ++  G+V+++G   +G+LG G    +  PR ++A   E V    +SCG +H+
Sbjct: 3562 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEV--VQMSCGFKHS 3619

Query: 419  AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLAV 474
            AV+  DGK+F +G   YG+LGLG+  ++ +P +VT +EG     VACG  HT+ +++
Sbjct: 3620 AVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVSM 3676



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 111/395 (28%), Positives = 161/395 (40%), Gaps = 79/395 (20%)

Query: 41   TVGSAWRDVCGGGCGFAMAISD--------SRKLITWGSTDDLGQSYVTSGKHGEIPEPF 92
            +   A + VCG  C F +  +         S   +  G++DDL    V S   G +    
Sbjct: 3498 SFSQAQQVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVV--- 3554

Query: 93   PLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQS 152
                   +V +     H +A+TE GEV++WG  +       +G L  G   D+    RQ 
Sbjct: 3555 -----TQLVTSCGSDGHSMALTESGEVFSWGDGD-------YGKLGHGNS-DRQRRPRQ- 3600

Query: 153  SFLTEQVSPRSQVSRSSGGTSSGT---DGR----GSGEEGSKRRRISLAKQTAESSSSGD 205
                E +     V  S G   S     DG+    G+G+ G    R+ L          G+
Sbjct: 3601 ---IEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYG----RLGL----------GN 3643

Query: 206  ENLSAFPCLVTLNPGVRIATVAAGGRHTLALS-DIGQVWGWGYGGEGQLGLGSRIRMVSS 264
             +    P  VT   G +I  VA G  HT+A+S D   VW +G G  G+LGLG+     SS
Sbjct: 3644 TSNKKLPERVTALEGYQIGQVACGLNHTVAVSMDGSMVWAFGDGDYGKLGLGNSTAK-SS 3702

Query: 265  PHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTF 324
            P  +  +                           G  +K +ACG + S  +T  G + TF
Sbjct: 3703 PQKVDIL--------------------------CGIGIKKVACGTQFSVALTKDGHVYTF 3736

Query: 325  GWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQL 384
            G        +G   +   P  V  L G+ IE +A G  HT+ +SS GDVYA+G N  GQL
Sbjct: 3737 GQDRLIGLPEGRARNHNRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQL 3796

Query: 385  GTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            G G       P L+     +N+  + +S G  H+A
Sbjct: 3797 GLGHTNHVREPTLITVLQGKNI--RQISAGRCHSA 3829



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 95/174 (54%), Gaps = 5/174 (2%)

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
           + I  G   + VI+  G++   G G YG+ G G ++++ +   ++      I+ V++   
Sbjct: 406 QTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKG 465

Query: 363 ---HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
              HT+  +++G+V+++G   +G+LG G    +  P+L+  P L+      VS G RH+A
Sbjct: 466 SDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCVSAGYRHSA 524

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
            + +DG+++ WG   +G+LG GD   RNIP+ V     V   V+CG  HT+ L+
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG-EVSCGSSHTIALS 577



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 132/298 (44%), Gaps = 35/298 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGR---HTLALSDIGQVWGWGYGGEGQLGLGSRI- 259
           GD N  +    +T  P   I  V++      HTLA +  G+V+ WG G  G+LG G+   
Sbjct: 438 GDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSST 497

Query: 260 ----RMVSSP---HPIPCIESSY---------------GKDRSAALSRGSVNSEG-PGFR 296
               +++  P     + C+ + Y               G+     L  G  NS   P   
Sbjct: 498 QKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557

Query: 297 VPGNYVKGIACGGRHSAVITDAGALL-TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
              + V  ++CG  H+  ++  G  + +FG G  G+ G G T+    P  + +L G+ I 
Sbjct: 558 KDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIR 617

Query: 356 GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL-PRLLDAPSLENVHSKSVSCG 414
            V AG   ++ ++S G VYA+G      LG G  +A  L P+L++   L       +S G
Sbjct: 618 KVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE--ELAATRIVDISIG 673

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVI-DRNIPSQVT-IEGCVPRNVACGWWHTL 470
             H   ++ D +V+ WG N  GQ G G+       P +V+ ++G   + ++ G  H+L
Sbjct: 674 DSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVSIQQISAGTSHSL 731



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 112/251 (44%), Gaps = 31/251 (12%)

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
           T+ AG   T  +S  G V   G G  G+LGLG       S +     + ++   RS    
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLG------DSNNQSTLKKLTFEPHRSIKKV 460

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN 344
             S  S+G                  H+   T  G + ++G G YG+ G G++  +  P 
Sbjct: 461 SSSKGSDG------------------HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPK 502

Query: 345 CVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSL 403
            +   L G  +  V+AG  H+  ++ DG++Y +G   FG+LG G   +  +P L+    +
Sbjct: 503 LIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK--DI 560

Query: 404 ENVHSKSVSCGARHTAVIADDGK-VFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRN 461
            NV    VSCG+ HT  ++ DG+ V+ +G    G+LG GD      P  +  ++G   R 
Sbjct: 561 SNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK 618

Query: 462 VACGWWHTLLL 472
           V  G   +L L
Sbjct: 619 VCAGSQSSLAL 629



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 86/324 (26%), Positives = 130/324 (40%), Gaps = 67/324 (20%)

Query: 52  GGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVK-AAAGWA 108
           G  G  +A +   ++ +WG  D   LG    ++ K+   P+    P +  +V   +AG+ 
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY---PKLIQGPLQGKVVVCVSAGYR 521

Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRS 168
           H  AVTE GE+YTWG  +       FG L  G     D   R    L + +S   +VS  
Sbjct: 522 HSAAVTEDGELYTWGEGD-------FGRLGHG-----DSNSRNIPTLVKDISNVGEVSCG 569

Query: 169 SGGTSS-GTDGR-----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVR 222
           S  T +   DGR     G G+ G                  GD N    P ++    G+ 
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKL--------------GHGDTNRVYKPKVIEALQGMF 615

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V AG + +LAL+  GQV+ WG G    LG GS       P  I              
Sbjct: 616 IRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE------------- 660

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                         +    +  I+ G  H   ++    +  +G    GQCGQG++   ++
Sbjct: 661 -------------ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPIT 707

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTI 365
            P  VS L G+ I+ ++AG  H++
Sbjct: 708 KPKKVSGLDGVSIQQISAGTSHSL 731



 Score = 45.4 bits (106), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 4/89 (4%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           +S   +VY +G N   QL  G  +    P+L  APS  +  ++++  G   T VI+ DG 
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKL--APSFSD--AQTIEAGQYCTFVISTDGS 423

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
           V   G   YG+LGLGD  +++   ++T E
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFE 452


>gi|449676621|ref|XP_004208667.1| PREDICTED: uncharacterized protein LOC101237479, partial [Hydra
           magnipapillata]
          Length = 896

 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 78/275 (28%), Positives = 129/275 (46%), Gaps = 53/275 (19%)

Query: 218 NPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLG---SRIRMVSSPHPIPCIESS 274
           N G+++ +VA G  HT+AL + G V+ WG    GQLG+G   +R R V   H        
Sbjct: 494 NQGIQVVSVACGEFHTIALCEEG-VYSWGSNEYGQLGVGDTRTRYRPVLITH-------- 544

Query: 275 YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
                                 +    +  + CG  H+  IT    + ++GWG++GQ G 
Sbjct: 545 ----------------------ISSKQIVSVVCGAYHTLAITSDYKVYSWGWGVHGQLGL 582

Query: 335 GSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL 394
            S +++L+P  +  L   ++   AAG  H+  ++S   VY FG + +GQLG G    + +
Sbjct: 583 KSVENQLTPKQIDLLDSHKVIQAAAGYAHSAVLTSQRYVYTFGADLYGQLGIGSHYKQVI 642

Query: 395 PRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWN-------------KYGQLGLG 441
           P+L+D+ +L++++   +SCG   T  I++D  +FCWG N             KYG+    
Sbjct: 643 PQLVDSLTLDSIY--LISCGPFETIAISEDQTIFCWGRNYHQFYICAKAESSKYGRKMAS 700

Query: 442 DVIDRN---IPSQVTIEGCVP-RNVACGWWHTLLL 472
           +  D N    P  +  +   P   + CG WH ++L
Sbjct: 701 NTKDLNHRFYPETLQFQLQHPITQIFCGNWHYIIL 735



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 101/371 (27%), Positives = 145/371 (39%), Gaps = 73/371 (19%)

Query: 102 KAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSP 161
           + A G  H   VT   E+YTWG KEC   GR     +T   +  +    Q     + VS 
Sbjct: 449 RIACGRNHIAFVTNNKELYTWG-KEC--GGRKDNVQNTCLPMRMENLHNQG---IQVVSV 502

Query: 162 RSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGV 221
                 +      G    GS E G                  GD      P L+T     
Sbjct: 503 ACGEFHTIALCEEGVYSWGSNEYGQL--------------GVGDTRTRYRPVLITHISSK 548

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
           +I +V  G  HTLA++   +V+ WG+G  GQLGL S +    +P  I  ++S        
Sbjct: 549 QIVSVVCGAYHTLAITSDYKVYSWGWGVHGQLGLKS-VENQLTPKQIDLLDS-------- 599

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL 341
                             + V   A G  HSAV+T    + TFG  LYGQ G GS   ++
Sbjct: 600 ------------------HKVIQAAAGYAHSAVLTSQRYVYTFGADLYGQLGIGSHYKQV 641

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN-------------QFGQLGTGG 388
            P  V SL    I  ++ G + TI IS D  ++ +G N             ++G+     
Sbjct: 642 IPQLVDSLTLDSIYLISCGPFETIAISEDQTIFCWGRNYHQFYICAKAESSKYGRKMASN 701

Query: 389 DQA-------ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
            +        ETL   L  P  +      + CG  H  ++    +V+ WG+N  GQLG  
Sbjct: 702 TKDLNHRFYPETLQFQLQHPITQ------IFCGNWHYIILTSVNQVYTWGYNDCGQLGHY 755

Query: 442 DVIDRNIPSQV 452
           + ID++ P  V
Sbjct: 756 NKIDQSAPRLV 766



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/175 (36%), Positives = 91/175 (52%), Gaps = 16/175 (9%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLL------GIQIEGVA 358
           IACG  H A +T+   L T  WG   +C  G   D +   C+   +      GIQ+  VA
Sbjct: 450 IACGRNHIAFVTNNKELYT--WG--KEC--GGRKDNVQNTCLPMRMENLHNQGIQVVSVA 503

Query: 359 AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
            G +HTI +  +G VY++G N++GQLG G  +    P L+   S + +   SV CGA HT
Sbjct: 504 CGEFHTIALCEEG-VYSWGSNEYGQLGVGDTRTRYRPVLITHISSKQI--VSVVCGAYHT 560

Query: 419 AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLL 472
             I  D KV+ WGW  +GQLGL  V ++  P Q+  ++       A G+ H+ +L
Sbjct: 561 LAITSDYKVYSWGWGVHGQLGLKSVENQLTPKQIDLLDSHKVIQAAAGYAHSAVL 615



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 101/445 (22%), Positives = 164/445 (36%), Gaps = 97/445 (21%)

Query: 4   EGQEEKMERVVFMWGYLPGALP-QRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISD 62
           E  E K+ +   +  ++ G L    S I S  +    L   S  R     G      +++
Sbjct: 403 EQSELKLRKRTLVSLHMSGQLSLTNSLIKSDSISSNDLLFTSTPRARIACGRNHIAFVTN 462

Query: 63  SRKLITWGSTDDLGQSYVTSGKHGEIPEP-FPLPTE------ASIVKAAAGWAHCVAVTE 115
           +++L TWG            G+   +     P+  E        +V  A G  H +A+ E
Sbjct: 463 NKELYTWGKE--------CGGRKDNVQNTCLPMRMENLHNQGIQVVSVACGEFHTIALCE 514

Query: 116 GGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSS- 174
            G VY+WG  E       +G L  G     D   R    L   +S +  VS   G   + 
Sbjct: 515 EG-VYSWGSNE-------YGQLGVG-----DTRTRYRPVLITHISSKQIVSVVCGAYHTL 561

Query: 175 --GTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAA 228
              +D +    G G  G       L  ++ E+  +        P  + L    ++   AA
Sbjct: 562 AITSDYKVYSWGWGVHGQ------LGLKSVENQLT--------PKQIDLLDSHKVIQAAA 607

Query: 229 GGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMV----------SSPHPIPC-------- 270
           G  H+  L+    V+ +G    GQLG+GS  + V           S + I C        
Sbjct: 608 GYAHSAVLTSQRYVYTFGADLYGQLGIGSHYKQVIPQLVDSLTLDSIYLISCGPFETIAI 667

Query: 271 ---------------------IESS-YGKDRSAALSRGSVNS----EGPGFRVPGNYVKG 304
                                 ESS YG  R  A +   +N     E   F++    +  
Sbjct: 668 SEDQTIFCWGRNYHQFYICAKAESSKYG--RKMASNTKDLNHRFYPETLQFQLQHP-ITQ 724

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           I CG  H  ++T    + T+G+   GQ G  +  D+ +P  V +L+   I GVA G   +
Sbjct: 725 IFCGNWHYIILTSVNQVYTWGYNDCGQLGHYNKIDQSAPRLVKALIRRAIIGVAVGAEFS 784

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGD 389
           +   +D ++ A+G N  G++G   +
Sbjct: 785 VAFDADDNIMAWGRNDEGKIGIENE 809


>gi|328865201|gb|EGG13587.1| hypothetical protein DFA_11348 [Dictyostelium fasciculatum]
          Length = 628

 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 136/275 (49%), Gaps = 35/275 (12%)

Query: 202 SSGDENLSAFPCLVT--LNPGVRIATVAAGGRHTLALSDIG-QVWGWGYGGEGQLGLGSR 258
           +S  +++   P  V   +N  +R+  +A+G  H LA+   G QV+ WG    GQLG G +
Sbjct: 110 ASNSQSIIQLPTRVEQLINMQLRVLAMASGDSHVLAIVHPGNQVYAWGCNRWGQLGTGDQ 169

Query: 259 IRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDA 318
               ++P PI             A++  +V                ++CG +HS  +++ 
Sbjct: 170 TNR-ATPTPI-------------AIATPTV-------------FTSVSCGAQHSMALSNY 202

Query: 319 GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           G L ++G G  G+ G GS    LSP  VS+L+G QI  +A G+ H+      G VY +G 
Sbjct: 203 GELYSWGCGTGGRTGHGSEAPSLSPQVVSALVGKQITSMAGGMLHSAATDLRGSVYTWGW 262

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N++GQLG    +    P  L    +E  H   V+CG  HT ++  +G ++ +G+N  GQL
Sbjct: 263 NKYGQLGNNTAKKHLSPNKL--RDMEKHHVVKVTCGKNHTHLLTAEGHIYSFGFNVCGQL 320

Query: 439 GLGDVIDRNIPSQVTI-EGCVPRNVACGWWHTLLL 472
           G+G   D   P +V + E  V  ++  G++HTL L
Sbjct: 321 GVGGYADSQQPKKVDLPEHAV--DIVSGYYHTLCL 353



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 79/306 (25%), Positives = 139/306 (45%), Gaps = 60/306 (19%)

Query: 203 SGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI--- 259
           +GD+   A P  + +       +V+ G +H++ALS+ G+++ WG G  G+ G GS     
Sbjct: 166 TGDQTNRATPTPIAIATPTVFTSVSCGAQHSMALSNYGELYSWGCGTGGRTGHGSEAPSL 225

Query: 260 --RMVSSPHPIPCIESSYGKDRSAALS-RGSV------------NSEGPGFRVPG----- 299
             ++VS+         + G   SAA   RGSV            N+       P      
Sbjct: 226 SPQVVSALVGKQITSMAGGMLHSAATDLRGSVYTWGWNKYGQLGNNTAKKHLSPNKLRDM 285

Query: 300 --NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGV 357
             ++V  + CG  H+ ++T  G + +FG+ + GQ G G   D   P  V   L      +
Sbjct: 286 EKHHVVKVTCGKNHTHLLTAEGHIYSFGFNVCGQLGVGGYADSQQPKKVD--LPEHAVDI 343

Query: 358 AAGLWHTICISSDGDVYAFGGNQFGQLGTG---GDQAETLPRLLDAPSLENVHSKS---- 410
            +G +HT+C+++ G+VY++G    G LG G   G Q++  P+L+    + + +S S    
Sbjct: 344 VSGYYHTLCLTNKGNVYSWGYMSDGALGLGDIAGHQSK--PKLIPLSHIRHNYSDSMDSY 401

Query: 411 -----------------------VSCGARHTAVIADDGKVFCWGWNKYGQLGLG-DVIDR 446
                                  ++ GA ++A+I   GK++C+G+    ++G G +  D+
Sbjct: 402 NSIYESGGEGTNPRYAKGDVAEKIAAGAWNSAIITTSGKLYCFGFGDSYRIGNGTNTEDQ 461

Query: 447 NIPSQV 452
           +IP QV
Sbjct: 462 DIPCQV 467



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 99/396 (25%), Positives = 145/396 (36%), Gaps = 54/396 (13%)

Query: 17  WGYLPGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLG 76
           WG L           +P+ +  P    S     CG     +MA+S+  +L +WG      
Sbjct: 161 WGQLGTGDQTNRATPTPIAIATPTVFTSV---SCGAQ--HSMALSNYGELYSWGCG---- 211

Query: 77  QSYVTSGKHG---EIPEPFPLPTEA----SIVKAAAGWAHCVAVTEGGEVYTWGWKECVP 129
               T G+ G   E P   P    A     I   A G  H  A    G VYTWGW +   
Sbjct: 212 ----TGGRTGHGSEAPSLSPQVVSALVGKQITSMAGGMLHSAATDLRGSVYTWGWNK--- 264

Query: 130 SGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRR 189
               +G L   T               + +SP              T G+      +   
Sbjct: 265 ----YGQLGNNTA-------------KKHLSPNKLRDMEKHHVVKVTCGKNHTHLLTAEG 307

Query: 190 RI-SLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYG 248
            I S           G    S  P  V L        + +G  HTL L++ G V+ WGY 
Sbjct: 308 HIYSFGFNVCGQLGVGGYADSQQPKKVDLPE--HAVDIVSGYYHTLCLTNKGNVYSWGYM 365

Query: 249 GEGQLGLGSRIRMVSSPHPIPC--IESSYGKDRSAALSRGSVNSEGPGFR-VPGNYVKGI 305
            +G LGLG      S P  IP   I  +Y     +  S      EG   R   G+  + I
Sbjct: 366 SDGALGLGDIAGHQSKPKLIPLSHIRHNYSDSMDSYNSIYESGGEGTNPRYAKGDVAEKI 425

Query: 306 ACGGRHSAVITDAGALLTFGWGLYGQCGQGS-TDDELSPNCVSS-------LLGIQIEGV 357
           A G  +SA+IT +G L  FG+G   + G G+ T+D+  P  V S       L+ ++ +  
Sbjct: 426 AAGAWNSAIITTSGKLYCFGFGDSYRIGNGTNTEDQDIPCQVKSDEWGIEKLIQVEPKSS 485

Query: 358 AAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAET 393
              ++++I I++        GN    + T  +  +T
Sbjct: 486 IDQIFNSISINNTDKKKRSNGNSNSNIITDRNNHKT 521



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 2/103 (1%)

Query: 373 VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDG-KVFCWG 431
           +Y++G N FGQ  +       LP  ++      +   +++ G  H   I   G +V+ WG
Sbjct: 98  IYSWGYNYFGQCASNSQSIIQLPTRVEQLINMQLRVLAMASGDSHVLAIVHPGNQVYAWG 157

Query: 432 WNKYGQLGLGDVIDRNIPSQVTIEG-CVPRNVACGWWHTLLLA 473
            N++GQLG GD  +R  P+ + I    V  +V+CG  H++ L+
Sbjct: 158 CNRWGQLGTGDQTNRATPTPIAIATPTVFTSVSCGAQHSMALS 200


>gi|224031923|gb|ACN35037.1| unknown [Zea mays]
          Length = 220

 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 60/160 (37%), Positives = 92/160 (57%), Gaps = 4/160 (2%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           +ACG RH+  ++D+G L T+GW  YGQ G G  +D L P+ V +L    I  ++ G  HT
Sbjct: 4   VACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSTISQISGGWRHT 63

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           + ++S+G +Y +G N+FGQ+G G +   + P  +  P  + +    V+CG RHT  +++ 
Sbjct: 64  MALTSEGKLYGWGWNKFGQVGVGNNDDHSSPGQVSFPEDQKI--SQVACGWRHTLALSEK 121

Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVAC 464
             VF WG    GQLG G+++DRN P  V I+       AC
Sbjct: 122 KNVFSWGRGTSGQLGNGEIVDRNTP--VLIDALSSDGSAC 159



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 48/118 (40%), Positives = 73/118 (61%), Gaps = 3/118 (2%)

Query: 357 VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR 416
           VA G  HTI +S  G++Y +G +++GQLG G  +   +P  ++A  L++     +S G R
Sbjct: 4   VACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPHKVEA--LKDSTISQISGGWR 61

Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACGWWHTLLLA 473
           HT  +  +GK++ WGWNK+GQ+G+G+  D + P QV+  E      VACGW HTL L+
Sbjct: 62  HTMALTSEGKLYGWGWNKFGQVGVGNNDDHSSPGQVSFPEDQKISQVACGWRHTLALS 119



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 82/180 (45%), Gaps = 27/180 (15%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  VA G RHT+ +SD G ++ +G+   GQLG G     +  PH +  ++ S        
Sbjct: 1   MVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHLV-PHKVEALKDST------- 52

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                              +  I+ G RH+  +T  G L  +GW  +GQ G G+ DD  S
Sbjct: 53  -------------------ISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHSS 93

Query: 343 PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPS 402
           P  VS     +I  VA G  HT+ +S   +V+++G    GQLG G       P L+DA S
Sbjct: 94  PGQVSFPEDQKISQVACGWRHTLALSEKKNVFSWGRGTSGQLGNGEIVDRNTPVLIDALS 153



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 72/160 (45%), Gaps = 19/160 (11%)

Query: 100 IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQV 159
           +V  A GW H + V++ G +YT+GW +       +G L  G   D  V  +  +     +
Sbjct: 1   MVLVACGWRHTITVSDSGNLYTYGWSK-------YGQLGHGDFEDHLVPHKVEALKDSTI 53

Query: 160 SPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
           S  S   R +   +S  +G+  G   +K  ++ +      SS          P  V+   
Sbjct: 54  SQISGGWRHTMALTS--EGKLYGWGWNKFGQVGVGNNDDHSS----------PGQVSFPE 101

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
             +I+ VA G RHTLALS+   V+ WG G  GQLG G  +
Sbjct: 102 DQKISQVACGWRHTLALSEKKNVFSWGRGTSGQLGNGEIV 141



 Score = 41.6 bits (96), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 1/72 (1%)

Query: 52  GGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCV 111
           GG    MA++   KL  WG  +  GQ  V +      P     P +  I + A GW H +
Sbjct: 58  GGWRHTMALTSEGKLYGWG-WNKFGQVGVGNNDDHSSPGQVSFPEDQKISQVACGWRHTL 116

Query: 112 AVTEGGEVYTWG 123
           A++E   V++WG
Sbjct: 117 ALSEKKNVFSWG 128



 Score = 38.5 bits (88), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 10/93 (10%)

Query: 54  CGF--AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCV 111
           CG+   + +SDS  L T+G +   GQ      +   +P       +++I + + GW H +
Sbjct: 6   CGWRHTITVSDSGNLYTYGWSK-YGQLGHGDFEDHLVPHKVEALKDSTISQISGGWRHTM 64

Query: 112 AVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLD 144
           A+T  G++Y WGW +       FG +  G   D
Sbjct: 65  ALTSEGKLYGWGWNK-------FGQVGVGNNDD 90


>gi|301755556|ref|XP_002913645.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC5-like
           [Ailuropoda melanoleuca]
          Length = 1035

 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 87/268 (32%), Positives = 129/268 (48%), Gaps = 33/268 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI------PCIESSYG 276
           I  +A G  H+LALS  G+++ WG    GQLG+G     + +P  +      P ++ S G
Sbjct: 151 IIQIACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSGVPLVQISAG 210

Query: 277 KDRSAALSR-GSV--------------NSEGPGF-----RVPGNYVKGIACGGRHSAVIT 316
           K  S ALS  G+V              +++G  F      +    V+ +ACGG H+A++T
Sbjct: 211 KAHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFLACGGSHTALLT 270

Query: 317 DAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD-GDVYA 375
             G + TFG G YGQ G  ST +EL P  V+ L G ++  +A G  HT+   SD G V++
Sbjct: 271 TDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQIACGRRHTLAYVSDLGKVFS 330

Query: 376 FGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKY 435
           FG  + GQLG GG   + +P  +  PS E +  +S +       +   +  V  W   K 
Sbjct: 331 FGSGKEGQLGNGGTHNQLIPLPMKLPSNEELKFESRTSDKELVMIAGGNQSVLLWMEKKN 390

Query: 436 GQLGLGDVIDRNIPSQVTIEGCVPRNVA 463
             + L     R IP+    EG V R +A
Sbjct: 391 PYVNL----RRKIPT--LNEGTVKRWIA 412



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 110/248 (44%), Gaps = 41/248 (16%)

Query: 47  RDVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASI--VK 102
           + +    CG   ++A+S   +L  WG   +L            IP P  +   + +  V+
Sbjct: 149 KSIIQIACGDYHSLALSKGGELFAWGQ--NLHGQLGVGRLFASIPTPQAVEHLSGVPLVQ 206

Query: 103 AAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPR 162
            +AG AH +A++  G VY+WG  +    G    D      L + +  +Q  FL       
Sbjct: 207 ISAGKAHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFL------- 259

Query: 163 SQVSRSSGGTSSG---TDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLV 215
                + GG+ +    TDG     G+G+ G          Q   +S+  +      P LV
Sbjct: 260 -----ACGGSHTALLTTDGLVFTFGAGKYG----------QLGHNSTQNELR----PRLV 300

Query: 216 TLNPGVRIATVAAGGRHTLA-LSDIGQVWGWGYGGEGQLGL-GSRIRMVSSPHPIPCIES 273
           T   G R+  +A G RHTLA +SD+G+V+ +G G EGQLG  G+  +++  P  +P  E 
Sbjct: 301 TELAGNRVTQIACGRRHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEE 360

Query: 274 SYGKDRSA 281
              + R++
Sbjct: 361 LKFESRTS 368



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 67/172 (38%), Gaps = 42/172 (24%)

Query: 343 PNCVSSLLGIQIEGVAAGLWHTICISSD-------------------------------- 370
           P CV     ++I  V  G  H + +SSD                                
Sbjct: 100 PACVKLGKKMKIHSVDQGAEHMLILSSDGKPFEYNYSIEHARFQCILQEKSIIQIACGDY 159

Query: 371 --------GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIA 422
                   G+++A+G N  GQLG G   A ++P       L  V    +S G  H+  ++
Sbjct: 160 HSLALSKGGELFAWGQNLHGQLGVGRLFA-SIPTPQAVEHLSGVPLVQISAGKAHSMALS 218

Query: 423 DDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLA 473
             G V+ WG N  GQLGLG     + PS + T++      +ACG  HT LL 
Sbjct: 219 MSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFLACGGSHTALLT 270


>gi|145594515|ref|YP_001158812.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
           CNB-440]
 gi|145303852|gb|ABP54434.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
           CNB-440]
          Length = 554

 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 98/293 (33%), Positives = 132/293 (45%), Gaps = 31/293 (10%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI--- 268
           P  V L  G  I  +AAG RH+LAL+D G V  WG    GQLG G+     S+P  +   
Sbjct: 133 PVTVGLPAGTTITALAAGRRHSLALTDTGAVLAWGSNSNGQLGDGTTTAR-STPVTVGLP 191

Query: 269 ------PCIESSYG---KDRSAALSRGSVNSEGP-------------GFRVP-GNYVKGI 305
                     S+Y     D  AAL+ GS NS G                 +P G  +  +
Sbjct: 192 AGTTITALAASTYSLALTDTGAALAWGS-NSRGQLGDGTTTDRSTPVTVSLPAGTTITAL 250

Query: 306 ACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTI 365
           A    HS  +TD GA+L +G    GQ G G+T +  +P  V    G  I  +AAG  HT+
Sbjct: 251 AASYDHSLALTDTGAVLAWGSNSNGQLGDGTTTNRSTPVTVGLPAGTTITALAAGRSHTL 310

Query: 366 CISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDG 425
            ++S G V A+G N  GQLG G     + P  +  P+   +   +++ G  H+  + D G
Sbjct: 311 VLTSAGAVLAWGSNSNGQLGDGTTTDRSTPVTVGLPAGTTI--TALAAGYYHSLALTDTG 368

Query: 426 KVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGW-WHTLLLAVPPT 477
            V  WG N YGQLG G   DR+ P  V +       V      H + L  PPT
Sbjct: 369 AVLAWGGNSYGQLGDGTTTDRSTPVTVGLPAGTTITVLVSMDNHGMALVAPPT 421



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 101/374 (27%), Positives = 162/374 (43%), Gaps = 57/374 (15%)

Query: 32  SPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEP 91
           +P+ V LP   G+    +  GG   ++A++D+  ++ WGS +  GQ    +      P  
Sbjct: 80  TPVTVGLP--AGTTITALAAGGS-HSLALTDTGVVLAWGS-NSRGQLGDGTTTDRSTPVT 135

Query: 92  FPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQ 151
             LP   +I   AAG  H +A+T+ G V  WG      +G++    +T       V    
Sbjct: 136 VGLPAGTTITALAAGRRHSLALTDTGAVLAWGSNS---NGQLGDGTTTARSTPVTVGLPA 192

Query: 152 SSFLTEQVSPRSQVSRSSGGTSS--GTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLS 209
            + +T   +    ++ +  G +   G++ RG   +G+   R                   
Sbjct: 193 GTTITALAASTYSLALTDTGAALAWGSNSRGQLGDGTTTDR------------------- 233

Query: 210 AFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP 269
           + P  V+L  G  I  +AA   H+LAL+D G V  WG    GQLG G+            
Sbjct: 234 STPVTVSLPAGTTITALAASYDHSLALTDTGAVLAWGSNSNGQLGDGTT----------- 282

Query: 270 CIESSYGKDRSAALSRGSVNSEGPGFRVP-GNYVKGIACGGRHSAVITDAGALLTFGWGL 328
                   +RS  ++ G          +P G  +  +A G  H+ V+T AGA+L +G   
Sbjct: 283 -------TNRSTPVTVG----------LPAGTTITALAAGRSHTLVLTSAGAVLAWGSNS 325

Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGG 388
            GQ G G+T D  +P  V    G  I  +AAG +H++ ++  G V A+GGN +GQLG G 
Sbjct: 326 NGQLGDGTTTDRSTPVTVGLPAGTTITALAAGYYHSLALTDTGAVLAWGGNSYGQLGDGT 385

Query: 389 DQAETLPRLLDAPS 402
               + P  +  P+
Sbjct: 386 TTDRSTPVTVGLPA 399


>gi|387019663|gb|AFJ51949.1| putative E3 ubiquitin-protein ligase HERC4-like [Crotalus
           adamanteus]
          Length = 1052

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/249 (32%), Positives = 114/249 (45%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I TV+ G  HTLAL+D GQV+ WG+  +GQLGL         P  I  +           
Sbjct: 86  IVTVSCGEAHTLALNDKGQVYAWGFAVDGQLGLSGTEEYTRVPRNIKSLSDIQ------- 138

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDEL 341
                              +  +ACG  HS  ++    + ++G   YGQ G G     + 
Sbjct: 139 -------------------IVQVACGYFHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQA 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  + SLLGI    +AAG  H+  ++  G V+ +G N+FGQLG   +    +P LL   
Sbjct: 180 SPQIIKSLLGIPFAQIAAGGAHSFVLTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLK-- 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL +     +SCG  HTA +  +G VF +G   YGQLG         P +V  + G +  
Sbjct: 238 SLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTAHEINPRKVFELMGNIVT 297

Query: 461 NVACGWWHT 469
            +ACG  HT
Sbjct: 298 QIACGRQHT 306



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/267 (31%), Positives = 125/267 (46%), Gaps = 38/267 (14%)

Query: 203 SGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMV 262
           SG E  +  P  +     ++I  VA G  H+LALS   +V+ WG    GQLGLG   +  
Sbjct: 119 SGTEEYTRVPRNIKSLSDIQIVQVACGYFHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQ 178

Query: 263 SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL 322
           +SP     I+S  G                    +P      IA GG HS V+T +GA+ 
Sbjct: 179 ASPQ---IIKSLLG--------------------IP---FAQIAAGGAHSFVLTLSGAV- 211

Query: 323 TFGWGL--YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
            FGWG   +GQ G    +D   PN + SL   +I  ++ G  HT  ++ +G V+ FG   
Sbjct: 212 -FGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGG 270

Query: 381 FGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLG 439
           +GQLG      E  PR +    + N+ ++ ++CG +HT A +   G+++ +G    GQLG
Sbjct: 271 YGQLGHNSTAHEINPRKV-FELMGNIVTQ-IACGRQHTSAFVPSTGRIYSFGLGGNGQLG 328

Query: 440 LGDVIDRNIPSQVT-----IEGCVPRN 461
           +G   +R  P  V        G +P N
Sbjct: 329 MGTTSNRKSPFPVKGNWLPYNGQIPLN 355



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 84/160 (52%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P   S  +  +++ V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRRCSFFVNKKVQDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG+   GQL
Sbjct: 61  NDLGQL--GHEKSRKRPEQVGALDAQNI--VTVSCGEAHTLALNDKGQVYAWGFAVDGQL 116

Query: 439 GLGDV-----IDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLSGTEEYTRVPRNIKSLSDIQIV---QVACGYFHSLALS 153



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 77/307 (25%), Positives = 125/307 (40%), Gaps = 62/307 (20%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D       + ++  +P      ++  IV+ A
Sbjct: 84  QNIVTVSCGEAHTLALNDKGQVYAWGFAVDGQLGLSGTEEYTRVPRNIKSLSDIQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++G EV++WG  +       +G L  G    K            Q SP  Q
Sbjct: 144 CGYFHSLALSKGSEVFSWGQNK-------YGQLGLGYEYKK------------QASP--Q 182

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLA-------KQTAESSSSGDENLSAFPCLVTL 217
           + +S  G        G    G+    ++L+       +         DEN    P L+  
Sbjct: 183 IIKSLLGIPFAQIAAG----GAHSFVLTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 218 NPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
               +I  ++ G  HT AL+  G V+ +G GG GQLG  S    + +P  +         
Sbjct: 239 LRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTAHEI-NPRKV--------- 288

Query: 278 DRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGS 336
                            F + GN V  IACG +H SA +   G + +FG G  GQ G G+
Sbjct: 289 -----------------FELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGT 331

Query: 337 TDDELSP 343
           T +  SP
Sbjct: 332 TSNRKSP 338



 Score = 41.6 bits (96), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 57/247 (23%), Positives = 96/247 (38%), Gaps = 46/247 (18%)

Query: 37  RLPLTVGSAWR-DVCGGGCGF--AMAISDSRKLITWGSTDD----LGQSYVTSGKHGEIP 89
           R+P  + S     +    CG+  ++A+S   ++ +WG        LG  Y        I 
Sbjct: 126 RVPRNIKSLSDIQIVQVACGYFHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQASPQIIK 185

Query: 90  EPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFE 149
               +P      + AAG AH   +T  G V+ WG  +       FG L      D+ V  
Sbjct: 186 SLLGIP----FAQIAAGGAHSFVLTLSGAVFGWGRNK-------FGQLGLNDENDRYVPN 234

Query: 150 RQSSFLTEQV-------SPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSS 202
              S  ++++          + +++  G  + G  G G               Q   +S+
Sbjct: 235 LLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYG---------------QLGHNST 279

Query: 203 SGDENLSAFPCLVTLNPGVRIATVAAGGRHTLAL-SDIGQVWGWGYGGEGQLGLGSRIRM 261
           + + N    P  V    G  +  +A G +HT A     G+++ +G GG GQLG+G+    
Sbjct: 280 AHEIN----PRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGTTSNR 335

Query: 262 VSSPHPI 268
             SP P+
Sbjct: 336 -KSPFPV 341


>gi|307176968|gb|EFN66274.1| X-linked retinitis pigmentosa GTPase regulator-like protein
            [Camponotus floridanus]
          Length = 1719

 Score =  120 bits (302), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 70/211 (33%), Positives = 111/211 (52%), Gaps = 32/211 (15%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V + +V+ G  HTLA+++ G ++ WG    GQLGLG ++   SSP  I  +      D  
Sbjct: 867  VEVFSVSCGHCHTLAVTNNG-IYAWGSSQFGQLGLG-KVLQCSSPELIISLAQEIIIDA- 923

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                            V G Y         HS  +T  G + T+GWG++GQ G G+TD++
Sbjct: 924  ----------------VAGQY---------HSVALTADGRVFTWGWGIHGQLGHGNTDEK 958

Query: 341  LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
            ++P+ V++LLG+ +  ++AG  HT+ +S DG VYAFG N  GQLG GG+   ++P  +  
Sbjct: 959  ITPSLVTALLGVVVRCISAGYAHTLALSVDGIVYAFGSNVLGQLGIGGNAKSSIPTKISL 1018

Query: 401  PSLENVHSKSVSCGARHTAVIADDGKVFCWG 431
            P    +    ++ G  H   ++D  K++ WG
Sbjct: 1019 PDGIIL----INTGYFHNLALSDTNKLYVWG 1045



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 76/262 (29%), Positives = 124/262 (47%), Gaps = 35/262 (13%)

Query: 215  VTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESS 274
            + L+   +  +++AG  H +AL   G ++ WG   +G LG GS +    +PH I C    
Sbjct: 807  IALHVDFKRRSLSAGFSH-VALIRNGNIYTWGSSVQGCLGTGSSVLRYGAPHAI-CF--- 861

Query: 275  YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWG--LYGQC 332
                                FR     V  ++CG  H+  +T+ G    + WG   +GQ 
Sbjct: 862  --------------------FRSMEVEVFSVSCGHCHTLAVTNNG---IYAWGSSQFGQL 898

Query: 333  GQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAE 392
            G G      SP  + SL    I    AG +H++ +++DG V+ +G    GQLG G    +
Sbjct: 899  GLGKVLQCSSPELIISLAQEIIIDAVAGQYHSVALTADGRVFTWGWGIHGQLGHGNTDEK 958

Query: 393  TLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
              P L+ A  L  V  + +S G  HT  ++ DG V+ +G N  GQLG+G     +IP+++
Sbjct: 959  ITPSLVTA--LLGVVVRCISAGYAHTLALSVDGIVYAFGSNVLGQLGIGGNAKSSIPTKI 1016

Query: 453  TI-EGCVPRNVACGWWHTLLLA 473
            ++ +G +  N   G++H L L+
Sbjct: 1017 SLPDGIILINT--GYFHNLALS 1036



 Score = 48.9 bits (115), Expect = 0.006,   Method: Composition-based stats.
 Identities = 67/235 (28%), Positives = 95/235 (40%), Gaps = 40/235 (17%)

Query: 55   GFA-MAISDSRKLITWGSTDD----LGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAH 109
            GF+ +A+  +  + TWGS+       G S +  G    I   F    E  +   + G  H
Sbjct: 821  GFSHVALIRNGNIYTWGSSVQGCLGTGSSVLRYGAPHAIC--FFRSMEVEVFSVSCGHCH 878

Query: 110  CVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSS 169
             +AVT  G +Y WG  +       FG L  G  L     E   S   E +     V+   
Sbjct: 879  TLAVTNNG-IYAWGSSQ-------FGQLGLGKVLQCSSPELIISLAQEIII--DAVAGQY 928

Query: 170  GGTSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIAT 225
               +   DGR    G G  G          Q    ++  DE ++  P LVT   GV +  
Sbjct: 929  HSVALTADGRVFTWGWGIHG----------QLGHGNT--DEKIT--PSLVTALLGVVVRC 974

Query: 226  VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR-----MVSSPHPIPCIESSY 275
            ++AG  HTLALS  G V+ +G    GQLG+G   +      +S P  I  I + Y
Sbjct: 975  ISAGYAHTLALSVDGIVYAFGSNVLGQLGIGGNAKSSIPTKISLPDGIILINTGY 1029



 Score = 43.9 bits (102), Expect = 0.17,   Method: Composition-based stats.
 Identities = 66/271 (24%), Positives = 109/271 (40%), Gaps = 33/271 (12%)

Query: 14   VFMWGY-LPGALPQRS---PILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITW 69
            VF WG+ + G L   +    I   LV  L   +G   R +   G    +A+S    +  +
Sbjct: 939  VFTWGWGIHGQLGHGNTDEKITPSLVTAL---LGVVVRCI-SAGYAHTLALSVDGIVYAF 994

Query: 70   GSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVP 129
            GS + LGQ  +       IP    LP    I+    G+ H +A+++  ++Y WG    V 
Sbjct: 995  GS-NVLGQLGIGGNAKSSIPTKISLPD--GIILINTGYFHNLALSDTNKLYVWGASPQVL 1051

Query: 130  SGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRR 189
              R+       T + +   ER++  L E           SG  +   D      +  +  
Sbjct: 1052 --RLQAQAQKRTRILEQQDERKNKTLEESEK------MPSGVINLNEDLLEDSVQTVETE 1103

Query: 190  RISLAKQTAESSSSGDENLSAFPCL----VTLNPGV--------RIATVAAGGRHTLALS 237
            RI+ + +T     SG  NL     +      L P +        +I  ++AG  H   ++
Sbjct: 1104 RITSSVET-RKKPSGSANLRNIELIDESQAHLKPSIVDTSLIRGQITQISAGCHHNALIT 1162

Query: 238  DIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
              G ++ WG   +GQLG G+R + V  P P+
Sbjct: 1163 KDGSLYTWGRNLDGQLGNGTR-KEVPIPTPL 1192



 Score = 43.5 bits (101), Expect = 0.22,   Method: Composition-based stats.
 Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 12/87 (13%)

Query: 390  QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIP 449
            QA   P ++D  SL       +S G  H A+I  DG ++ WG N  GQLG G   +  IP
Sbjct: 1131 QAHLKPSIVDT-SLIRGQITQISAGCHHNALITKDGSLYTWGRNLDGQLGNGTRKEVPIP 1189

Query: 450  SQVTIEGCVPRNVACGWWHTLLLAVPP 476
            + ++       N AC     +L  +PP
Sbjct: 1190 TPLSY------NPAC-----ILAQIPP 1205



 Score = 40.4 bits (93), Expect = 2.2,   Method: Composition-based stats.
 Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 1/56 (1%)

Query: 341  LSPNCV-SSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLP 395
            L P+ V +SL+  QI  ++AG  H   I+ DG +Y +G N  GQLG G  +   +P
Sbjct: 1134 LKPSIVDTSLIRGQITQISAGCHHNALITKDGSLYTWGRNLDGQLGNGTRKEVPIP 1189


>gi|281344276|gb|EFB19860.1| hypothetical protein PANDA_001439 [Ailuropoda melanoleuca]
          Length = 993

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 87/268 (32%), Positives = 129/268 (48%), Gaps = 33/268 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI------PCIESSYG 276
           I  +A G  H+LALS  G+++ WG    GQLG+G     + +P  +      P ++ S G
Sbjct: 108 IIQIACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSGVPLVQISAG 167

Query: 277 KDRSAALSR-GSV--------------NSEGPGF-----RVPGNYVKGIACGGRHSAVIT 316
           K  S ALS  G+V              +++G  F      +    V+ +ACGG H+A++T
Sbjct: 168 KAHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFLACGGSHTALLT 227

Query: 317 DAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD-GDVYA 375
             G + TFG G YGQ G  ST +EL P  V+ L G ++  +A G  HT+   SD G V++
Sbjct: 228 TDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQIACGRRHTLAYVSDLGKVFS 287

Query: 376 FGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKY 435
           FG  + GQLG GG   + +P  +  PS E +  +S +       +   +  V  W   K 
Sbjct: 288 FGSGKEGQLGNGGTHNQLIPLPMKLPSNEELKFESRTSDKELVMIAGGNQSVLLWMEKKN 347

Query: 436 GQLGLGDVIDRNIPSQVTIEGCVPRNVA 463
             + L     R IP+    EG V R +A
Sbjct: 348 PYVNLR----RKIPT--LNEGTVKRWIA 369



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 90/191 (47%), Gaps = 35/191 (18%)

Query: 100 IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQV 159
           +V+ +AG AH +A++  G VY+WG  +    G    D      L + +  +Q  FL    
Sbjct: 161 LVQISAGKAHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFL---- 216

Query: 160 SPRSQVSRSSGGTSSG---TDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFP 212
                   + GG+ +    TDG     G+G+ G          Q   +S+  +      P
Sbjct: 217 --------ACGGSHTALLTTDGLVFTFGAGKYG----------QLGHNSTQNELR----P 254

Query: 213 CLVTLNPGVRIATVAAGGRHTLA-LSDIGQVWGWGYGGEGQLGL-GSRIRMVSSPHPIPC 270
            LVT   G R+  +A G RHTLA +SD+G+V+ +G G EGQLG  G+  +++  P  +P 
Sbjct: 255 RLVTELAGNRVTQIACGRRHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPS 314

Query: 271 IESSYGKDRSA 281
            E    + R++
Sbjct: 315 NEELKFESRTS 325



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 67/173 (38%), Gaps = 42/173 (24%)

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSD------------------------------- 370
           S  CV     ++I  V  G  H + +SSD                               
Sbjct: 56  SAECVKLGKKMKIHSVDQGAEHMLILSSDGKPFEYNYSIEHARFQCILQEKSIIQIACGD 115

Query: 371 ---------GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
                    G+++A+G N  GQLG G   A ++P       L  V    +S G  H+  +
Sbjct: 116 YHSLALSKGGELFAWGQNLHGQLGVGRLFA-SIPTPQAVEHLSGVPLVQISAGKAHSMAL 174

Query: 422 ADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLA 473
           +  G V+ WG N  GQLGLG     + PS + T++      +ACG  HT LL 
Sbjct: 175 SMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFLACGGSHTALLT 227


>gi|224011731|ref|XP_002295640.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|209583671|gb|ACI64357.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 277

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/272 (33%), Positives = 139/272 (51%), Gaps = 32/272 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIAT-VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMV 262
           GD +    P  V    GV I T V  G  HT A++  G ++ WG G  G+LG G+     
Sbjct: 15  GDTSDQDEPTYVDALRGVGIITHVTCGSYHTAAVASNGDLYTWGGGMYGKLGHGNE---- 70

Query: 263 SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL 322
            S H  P         R  AL               G  +  IACG RH+AV+T  G L 
Sbjct: 71  -SGHSTP--------RRVEAL--------------VGLSIVDIACGSRHTAVVTSKGCLY 107

Query: 323 TFGWGLYGQCGQGSTD-DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
           T+G    G  G G T+  + +P  +  L G ++  ++A  +HT C++ D + +A+G  +F
Sbjct: 108 TWGDKENGVAGHGDTEGHQYTPKLLERLNGKKVVQLSACGFHTACLTDDHETFAWGEGKF 167

Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
           G+LG G ++    PRL++  SL   +   V+CG  H+AVI  DGK++ +G  ++GQLG  
Sbjct: 168 GRLGNGTERNCHSPRLIE--SLIGKYPCQVACGGFHSAVITRDGKMYTFGGGEHGQLGHA 225

Query: 442 DVIDRNIPSQV-TIEGCVPRNVACGWWHTLLL 472
           D +++  P+ V  ++G V + + CGW H++ L
Sbjct: 226 DKVNKLKPTLVEALDGVVVKQITCGWSHSVAL 257



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 74/276 (26%), Positives = 114/276 (41%), Gaps = 47/276 (17%)

Query: 100 IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQV 159
           I     G  H  AV   G++YTWG       G ++G L  G         R  + +   +
Sbjct: 35  ITHVTCGSYHTAAVASNGDLYTWG-------GGMYGKLGHGNESGHSTPRRVEALVGLSI 87

Query: 160 SPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGD-ENLSAFPCLVTLN 218
              +  SR +   +S            K    +   +    +  GD E     P L+   
Sbjct: 88  VDIACGSRHTAVVTS------------KGCLYTWGDKENGVAGHGDTEGHQYTPKLLERL 135

Query: 219 PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
            G ++  ++A G HT  L+D  + + WG G  G+LG G+  R   SP     IES  GK 
Sbjct: 136 NGKKVVQLSACGFHTACLTDDHETFAWGEGKFGRLGNGTE-RNCHSP---RLIESLIGK- 190

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
                                 Y   +ACGG HSAVIT  G + TFG G +GQ G     
Sbjct: 191 ----------------------YPCQVACGGFHSAVITRDGKMYTFGGGEHGQLGHADKV 228

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVY 374
           ++L P  V +L G+ ++ +  G  H++ ++S+G+ +
Sbjct: 229 NKLKPTLVEALDGVVVKQITCGWSHSVALTSEGEYH 264



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 2/101 (1%)

Query: 373 VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGW 432
           V+++G  + GQLG G    +  P  +DA     + +  V+CG+ HTA +A +G ++ WG 
Sbjct: 1   VFSWGRGEDGQLGIGDTSDQDEPTYVDALRGVGIITH-VTCGSYHTAAVASNGDLYTWGG 59

Query: 433 NKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLL 472
             YG+LG G+    + P +V  + G    ++ACG  HT ++
Sbjct: 60  GMYGKLGHGNESGHSTPRRVEALVGLSIVDIACGSRHTAVV 100



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 67/269 (24%), Positives = 101/269 (37%), Gaps = 62/269 (23%)

Query: 59  AISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEA----SIVKAAAGWAHCVAVT 114
           A++ +  L TWG     G  Y   G   E     P   EA    SIV  A G  H   VT
Sbjct: 47  AVASNGDLYTWG-----GGMYGKLGHGNESGHSTPRRVEALVGLSIVDIACGSRHTAVVT 101

Query: 115 EGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG--T 172
             G +YTWG KE   +G   GD             + +  L E+++ +  V  S+ G  T
Sbjct: 102 SKGCLYTWGDKENGVAGH--GDTEG---------HQYTPKLLERLNGKKVVQLSACGFHT 150

Query: 173 SSGTDGRGSGE--EGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGG 230
           +  TD   +    EG   R  +  ++   S    +  +  +PC            VA GG
Sbjct: 151 ACLTDDHETFAWGEGKFGRLGNGTERNCHSPRLIESLIGKYPC-----------QVACGG 199

Query: 231 RHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNS 290
            H+  ++  G+++ +G G  GQLG   ++  +  P  +  ++                  
Sbjct: 200 FHSAVITRDGKMYTFGGGEHGQLGHADKVNKL-KPTLVEALD------------------ 240

Query: 291 EGPGFRVPGNYVKGIACGGRHSAVITDAG 319
                   G  VK I CG  HS  +T  G
Sbjct: 241 --------GVVVKQITCGWSHSVALTSEG 261


>gi|332028555|gb|EGI68592.1| Putative E3 ubiquitin-protein ligase HERC4 [Acromyrmex echinatior]
          Length = 1049

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/250 (34%), Positives = 117/250 (46%), Gaps = 30/250 (12%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
           +A G  HTLA+++ GQ++ WG    GQLGL S    V     +P +    G         
Sbjct: 89  IACGNCHTLAVNEWGQLFSWGCNMNGQLGLNS----VDCTERVPRMIKVLGT-------- 136

Query: 286 GSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGS-TDDELSPN 344
                         N +  IACG  HS  +T+ G L  +G    GQ G GS T  E+ P 
Sbjct: 137 --------------NVIVQIACGTEHSIALTNDGELYAWGSNREGQLGLGSYTTTEIKPK 182

Query: 345 CVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLE 404
            +S+L  + I  +A G +HTI IS  G V+++G N FGQLG    Q   LP  L   +L 
Sbjct: 183 RISTLAAVPIAFIACGGYHTIVISKSGAVFSWGRNTFGQLGLNDVQQRNLPCQLR--TLR 240

Query: 405 NVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVA 463
           N      +CG   +  +  DG VF  G   YGQLG G+  +  +P QV  + G     ++
Sbjct: 241 NAKVCYATCGEEFSVFLTMDGGVFTCGAGMYGQLGHGNTTNEILPRQVMELMGSTVTQIS 300

Query: 464 CGWWHTLLLA 473
           CG  HTL L 
Sbjct: 301 CGKRHTLALV 310



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 125/274 (45%), Gaps = 37/274 (13%)

Query: 205 DENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGL-GSRIRMVS 263
           DEN+   P  V       +  +A G  +T+A++  G+V+  G    GQLG   +R R+  
Sbjct: 19  DENI-FMPREVDFIEASNVEQIACGENYTVAITKEGKVYSCGNNDYGQLGHEKARKRLQL 77

Query: 264 SPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLT 323
            P          G D                        + IACG  H+  + + G L +
Sbjct: 78  IP----------GLDAFV--------------------FRKIACGNCHTLAVNEWGQLFS 107

Query: 324 FGWGLYGQCGQGSTD-DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFG 382
           +G  + GQ G  S D  E  P  +  L    I  +A G  H+I +++DG++YA+G N+ G
Sbjct: 108 WGCNMNGQLGLNSVDCTERVPRMIKVLGTNVIVQIACGTEHSIALTNDGELYAWGSNREG 167

Query: 383 QLGTGG-DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
           QLG G     E  P+ +   +L  V    ++CG  HT VI+  G VF WG N +GQLGL 
Sbjct: 168 QLGLGSYTTTEIKPKRIS--TLAAVPIAFIACGGYHTIVISKSGAVFSWGRNTFGQLGLN 225

Query: 442 DVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLAV 474
           DV  RN+P Q+ T+         CG   ++ L +
Sbjct: 226 DVQQRNLPCQLRTLRNAKVCYATCGEEFSVFLTM 259



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 100/218 (45%), Gaps = 29/218 (13%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  +A G  H++AL++ G+++ WG   EGQLGLGS       P  I  + +         
Sbjct: 139 IVQIACGTEHSIALTNDGELYAWGSNREGQLGLGSYTTTEIKPKRISTLAA--------- 189

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                         VP   +  IACGG H+ VI+ +GA+ ++G   +GQ G         
Sbjct: 190 --------------VP---IAFIACGGYHTIVISKSGAVFSWGRNTFGQLGLNDVQQRNL 232

Query: 343 PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPS 402
           P  + +L   ++     G   ++ ++ DG V+  G   +GQLG G    E LPR      
Sbjct: 233 PCQLRTLRNAKVCYATCGEEFSVFLTMDGGVFTCGAGMYGQLGHGNTTNEILPR--QVME 290

Query: 403 LENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLG 439
           L       +SCG RHT A++   G+V+ WG    GQLG
Sbjct: 291 LMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLG 328



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 91/332 (27%), Positives = 141/332 (42%), Gaps = 66/332 (19%)

Query: 102 KAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDK-DVFERQSSFLTEQVS 160
           K A G  H +AV E G++++WG   C  +G++        GL+  D  ER    +  +V 
Sbjct: 88  KIACGNCHTLAVNEWGQLFSWG---CNMNGQL--------GLNSVDCTERVPRMI--KVL 134

Query: 161 PRSQVSRSSGGTSSGTDGRGSGEE---GSKRR-RISL-AKQTAESSSSGDENLSAFPCLV 215
             + + + + GT         GE    GS R  ++ L +  T E        L+A P   
Sbjct: 135 GTNVIVQIACGTEHSIALTNDGELYAWGSNREGQLGLGSYTTTEIKPKRISTLAAVP--- 191

Query: 216 TLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSY 275
                  IA +A GG HT+ +S  G V+ WG    GQLGL            +PC   + 
Sbjct: 192 -------IAFIACGGYHTIVISKSGAVFSWGRNTFGQLGLND-----VQQRNLPCQLRTL 239

Query: 276 GKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG 335
              R+A +   +                   CG   S  +T  G + T G G+YGQ G G
Sbjct: 240 ---RNAKVCYAT-------------------CGEEFSVFLTMDGGVFTCGAGMYGQLGHG 277

Query: 336 STDDELSPNCVSSLLGIQIEGVAAGLWHTI-CISSDGDVYAFGGNQFGQLGTGGDQAETL 394
           +T +E+ P  V  L+G  +  ++ G  HT+  + S G VYA+G    GQLG    Q+ T 
Sbjct: 278 NTTNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNRASQSATT 337

Query: 395 PRLL---------DAPSLENVHSKSVSCGARH 417
           P+++          +  L+  +S  + C  +H
Sbjct: 338 PQVVLGPWSSPSGSSVMLDLHYSPQIDCVVKH 369



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 53/102 (51%), Gaps = 9/102 (8%)

Query: 373 VYAFGGNQFGQLGTGGDQAET--LPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
           ++ +G    G+LG GG + E   +PR +D     NV  + ++CG  +T  I  +GKV+  
Sbjct: 1   MFCWGSTIHGELGLGGIEDENIFMPREVDFIEASNV--EQIACGENYTVAITKEGKVYSC 58

Query: 431 GWNKYGQLGLGDVIDR--NIPSQVTIEGCVPRNVACGWWHTL 470
           G N YGQLG      R   IP    ++  V R +ACG  HTL
Sbjct: 59  GNNDYGQLGHEKARKRLQLIPG---LDAFVFRKIACGNCHTL 97


>gi|355694501|gb|AER99690.1| hect domain and RLD 5 [Mustela putorius furo]
          Length = 675

 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/268 (31%), Positives = 131/268 (48%), Gaps = 33/268 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI------PCIESSYG 276
           I  +  G  H+LALS  G+++ WG    GQLG+G     + +P  +      P ++ S G
Sbjct: 49  IIQITCGDYHSLALSKGGELFAWGQNLHGQLGIGRLFASIPTPQLVEHLSGVPLVQISAG 108

Query: 277 KDRSAALSR-GSV--------------NSEGPGF-----RVPGNYVKGIACGGRHSAVIT 316
           K  S ALS  G++              +++G  F      +    V+ +ACGG H+A++T
Sbjct: 109 KAHSMALSMSGNIYSWGRNDLGQLGLGHTDGEEFPSLVEALDSQKVEFLACGGSHTALLT 168

Query: 317 DAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD-GDVYA 375
           + G + TFG G +GQ G  ST +EL P  V+ L GI++  VA G  HT+   SD G V++
Sbjct: 169 EDGQVFTFGAGKHGQLGHNSTQNELRPRLVTELTGIRVTQVACGRRHTLAYVSDLGKVFS 228

Query: 376 FGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKY 435
           FG  + GQLG GG   + +P  +  PS E++  +S +       +   +  +  W   K 
Sbjct: 229 FGSGKEGQLGNGGTHNQLIPLPMKLPSNEDLKFESRTSEKELIMIAGGNQSILLWMGKKN 288

Query: 436 GQLGLGDVIDRNIPSQVTIEGCVPRNVA 463
             + L     R IP+    EG + R +A
Sbjct: 289 PYVNL----RRKIPT--LNEGTIKRWIA 310



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 103/250 (41%), Gaps = 50/250 (20%)

Query: 97  EASIVKAAAGWAHCVAVTEGGEVYTWGWKEC--VPSGRVFGDLSTGTGLDKDVFERQSSF 154
           E SI++   G  H +A+++GGE++ WG      +  GR+F  + T               
Sbjct: 46  EKSIIQITCGDYHSLALSKGGELFAWGQNLHGQLGIGRLFASIPTPQ------------- 92

Query: 155 LTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCL 214
           L E +S    V  S+G   S             R  +    Q     + G+E    FP L
Sbjct: 93  LVEHLSGVPLVQISAGKAHSMALSMSGNIYSWGRNDLG---QLGLGHTDGEE----FPSL 145

Query: 215 VTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESS 274
           V      ++  +A GG HT  L++ GQV+ +G G  GQLG  S                 
Sbjct: 146 VEALDSQKVEFLACGGSHTALLTEDGQVFTFGAGKHGQLGHNS----------------- 188

Query: 275 YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHS-AVITDAGALLTFGWGLYGQCG 333
                +    R  + +E  G RV       +ACG RH+ A ++D G + +FG G  GQ G
Sbjct: 189 -----TQNELRPRLVTELTGIRVT-----QVACGRRHTLAYVSDLGKVFSFGSGKEGQLG 238

Query: 334 QGSTDDELSP 343
            G T ++L P
Sbjct: 239 NGGTHNQLIP 248


>gi|301122653|ref|XP_002909053.1| RCC1 and BTB domain-containing protein, putative [Phytophthora
           infestans T30-4]
 gi|262099815|gb|EEY57867.1| RCC1 and BTB domain-containing protein, putative [Phytophthora
           infestans T30-4]
          Length = 611

 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/314 (29%), Positives = 132/314 (42%), Gaps = 31/314 (9%)

Query: 191 ISLAKQTAESSSSGDENLSAFPCLVTL---NPGVRIATVAAGGRHTLALSDIGQVWGWGY 247
            S  + T    + GD N  + P  V L   N    +  VA G   T  L + G V+  GY
Sbjct: 33  FSFGQNTYGELALGDTNDRSTPTRVDLGRINDTKHVVDVACGNEQTTILFENGDVFTCGY 92

Query: 248 GGEGQLGLGSRIRM--------VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFR--- 296
              GQ  +G+  R+        +SS H +     +  +  +A  + G + + G   R   
Sbjct: 93  NDSGQCAIGTTERVPSLRFSPGLSSHHTVRLFSGNGSEHLAALCANGFLYTVGFNMRGQL 152

Query: 297 ----------------VPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                           + G  V  +AC   H+A++ D G L   G   YGQ G G     
Sbjct: 153 GLGTATTVTEATLVEELAGKRVVDVACSYFHTAIVMDNGDLHACGCNDYGQLGMGDHSGH 212

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
           L P  V       +  VA G  +T+    DG V AFG N  GQLG        L     A
Sbjct: 213 LVPRPVDYFFRHPVLAVACGQHYTVASLRDGGVVAFGKNDHGQLGLDRVSEPVLLPTRLA 272

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVP 459
           P L+      +SCG  HTA++ +DG V+ +G N YGQLGLG  +    P+ V ++     
Sbjct: 273 PPLDRAVVPQLSCGYHHTAIVTEDGAVYTFGRNDYGQLGLGHKLHMARPTPVESLSRMRI 332

Query: 460 RNVACGWWHTLLLA 473
             VACG +HTL L+
Sbjct: 333 TQVACGCYHTLALS 346



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 98/229 (42%), Gaps = 32/229 (13%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI-RMVSSP------HPIPCIE 272
           G R+  VA    HT  + D G +   G    GQLG+G     +V  P      HP+  + 
Sbjct: 171 GKRVVDVACSYFHTAIVMDNGDLHACGCNDYGQLGMGDHSGHLVPRPVDYFFRHPVLAVA 230

Query: 273 S---------------SYGKDRSAALSRGSVNSEG--PGFRVP---GNYVKGIACGGRHS 312
                           ++GK+    L    V+     P    P      V  ++CG  H+
Sbjct: 231 CGQHYTVASLRDGGVVAFGKNDHGQLGLDRVSEPVLLPTRLAPPLDRAVVPQLSCGYHHT 290

Query: 313 AVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGD 372
           A++T+ GA+ TFG   YGQ G G       P  V SL  ++I  VA G +HT+ +S DG 
Sbjct: 291 AIVTEDGAVYTFGRNDYGQLGLGHKLHMARPTPVESLSRMRITQVACGCYHTLALSDDGK 350

Query: 373 VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
           V+ FG N  GQLG      ET    L    +  + +K V+ G  H+  +
Sbjct: 351 VFPFGRNNHGQLGL-----ETSMDCLSPQLISTLRNKPVAAGFYHSVCL 394


>gi|219125443|ref|XP_002182991.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217405785|gb|EEC45727.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 341

 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/299 (29%), Positives = 151/299 (50%), Gaps = 29/299 (9%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR----- 258
           GD +    P  V    GV +  +A G  HT+ L+  G+V+ WG G +G+LG G       
Sbjct: 16  GDTSDQDEPTYVDALRGVGVQQIACGSGHTVVLTTDGEVFTWGRGDDGRLGHGDNGWKYV 75

Query: 259 IRMVSSPHPIPCIESSYGKDRSAALS-RGSVNSEGPGF----------------RVP--- 298
            RM  S      ++ + G   +AA++  G + + G G                 RV    
Sbjct: 76  PRMTQSLAGQIVLQVTCGSYHTAAVTGNGDLYTWGGGMYGKLGHGDEAGHATPKRVEALV 135

Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD-DELSPNCVSSLLGIQIEGV 357
           G  V  IACG RH+A++T +GAL T+G    G  G G T+  +  P  + S+   ++  +
Sbjct: 136 GATVAQIACGSRHTAIVTASGALYTWGDKENGVAGHGETEGHQYLPRLLESMAAKRVAQI 195

Query: 358 AAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARH 417
           +A  +HT  ++  G+++ +G  +FG+LG   ++    P ++D   +     + VSCG  H
Sbjct: 196 SACGFHTAIVTDAGELFTWGEGKFGRLGHMSERNCHSPTIVD--YMVGKKPRQVSCGGFH 253

Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLAVP 475
           TAV+++DG+++ +G  ++GQLG  D +++  P+ V  ++G     + CGW H++ L V 
Sbjct: 254 TAVVSEDGRLYTFGGGEHGQLGHNDRVNKMTPTFVEALDGMFVSQITCGWSHSVALTVK 312



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 108/387 (27%), Positives = 163/387 (42%), Gaps = 48/387 (12%)

Query: 66  LITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWK 125
           + TWG  +D GQ  +      + P          + + A G  H V +T  GEV+TWG  
Sbjct: 2   VFTWGRGED-GQLGLGDTSDQDEPTYVDALRGVGVQQIACGSGHTVVLTTDGEVFTWGRG 60

Query: 126 ECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEG 185
           +        G L  G    K V  R +  L  Q+    QV+  S  T++ T   G+G+  
Sbjct: 61  DD-------GRLGHGDNGWKYV-PRMTQSLAGQIVL--QVTCGSYHTAAVT---GNGD-- 105

Query: 186 SKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGW 245
                 +           GDE   A P  V    G  +A +A G RHT  ++  G ++ W
Sbjct: 106 ----LYTWGGGMYGKLGHGDEAGHATPKRVEALVGATVAQIACGSRHTAIVTASGALYTW 161

Query: 246 GYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGI 305
           G    G  G G           +P +  S    R A +S                     
Sbjct: 162 GDKENGVAGHGE----TEGHQYLPRLLESMAAKRVAQIS--------------------- 196

Query: 306 ACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTI 365
           ACG  H+A++TDAG L T+G G +G+ G  S  +  SP  V  ++G +   V+ G +HT 
Sbjct: 197 ACG-FHTAIVTDAGELFTWGEGKFGRLGHMSERNCHSPTIVDYMVGKKPRQVSCGGFHTA 255

Query: 366 CISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDG 425
            +S DG +Y FGG + GQLG      +  P  ++A  L+ +    ++CG  H+  +   G
Sbjct: 256 VVSEDGRLYTFGGGEHGQLGHNDRVNKMTPTFVEA--LDGMFVSQITCGWSHSVALTVKG 313

Query: 426 KVFCWGWNKYGQLGLGDVIDRNIPSQV 452
            V+ WG   +G+LG G+     +P  V
Sbjct: 314 LVYTWGNGDHGKLGHGNGRKVAVPQAV 340



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 53/154 (34%), Positives = 85/154 (55%), Gaps = 3/154 (1%)

Query: 320 ALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN 379
           A+ T+G G  GQ G G T D+  P  V +L G+ ++ +A G  HT+ +++DG+V+ +G  
Sbjct: 1   AVFTWGRGEDGQLGLGDTSDQDEPTYVDALRGVGVQQIACGSGHTVVLTTDGEVFTWGRG 60

Query: 380 QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG 439
             G+LG G +  + +PR+    SL       V+CG+ HTA +  +G ++ WG   YG+LG
Sbjct: 61  DDGRLGHGDNGWKYVPRM--TQSLAGQIVLQVTCGSYHTAAVTGNGDLYTWGGGMYGKLG 118

Query: 440 LGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLL 472
            GD      P +V  + G     +ACG  HT ++
Sbjct: 119 HGDEAGHATPKRVEALVGATVAQIACGSRHTAIV 152



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 85/349 (24%), Positives = 149/349 (42%), Gaps = 50/349 (14%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHG--EIPEPFPLPTEASIVKAAAGWAHC 110
           G G  + ++   ++ TWG  DD     +  G +G   +P          +++   G  H 
Sbjct: 41  GSGHTVVLTTDGEVFTWGRGDD---GRLGHGDNGWKYVPRMTQSLAGQIVLQVTCGSYHT 97

Query: 111 VAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSG 170
            AVT  G++YTWG       G ++G L  G        +R  + +   V+   Q++  S 
Sbjct: 98  AAVTGNGDLYTWG-------GGMYGKLGHGDEAGHATPKRVEALVGATVA---QIACGSR 147

Query: 171 GTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGG 230
            T+  T        G K   ++   +T        E     P L+      R+A ++A G
Sbjct: 148 HTAIVTASGALYTWGDKENGVAGHGET--------EGHQYLPRLLESMAAKRVAQISACG 199

Query: 231 RHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNS 290
            HT  ++D G+++ WG G  G+LG  S  R   SP  +  +                   
Sbjct: 200 FHTAIVTDAGELFTWGEGKFGRLGHMSE-RNCHSPTIVDYM------------------- 239

Query: 291 EGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLL 350
                   G   + ++CGG H+AV+++ G L TFG G +GQ G     ++++P  V +L 
Sbjct: 240 -------VGKKPRQVSCGGFHTAVVSEDGRLYTFGGGEHGQLGHNDRVNKMTPTFVEALD 292

Query: 351 GIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLD 399
           G+ +  +  G  H++ ++  G VY +G    G+LG G  +   +P+ ++
Sbjct: 293 GMFVSQITCGWSHSVALTVKGLVYTWGNGDHGKLGHGNGRKVAVPQAVE 341


>gi|405954130|gb|EKC21653.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
          Length = 2154

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/257 (34%), Positives = 129/257 (50%), Gaps = 35/257 (13%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
             ++AT      HTLA+++ G+V+ WG G  G+LG G+  R    P  I  ++        
Sbjct: 1886 TQLATSVGSDGHTLAVTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQ-------- 1936

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                              G  V  ++CG +HSAV+T  G L TFG G YG+ G G+T ++
Sbjct: 1937 ------------------GEEVIQLSCGFKHSAVVTADGKLFTFGNGDYGRLGLGTTTNK 1978

Query: 341  LSPNCVSSLLGIQIEGVAAGLWHTICISSDG-DVYAFGGNQFGQLGTGGDQAETLPRLLD 399
              P  V +L   QI  VA GL HT+C+S+DG +V+AFG   FG+LG G    + LP  + 
Sbjct: 1979 KVPTRVVALESHQIGYVACGLNHTLCVSADGTNVWAFGDGDFGKLGQGNTVGKHLPTKIK 2038

Query: 400  APSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVI--DRNIPSQV-TIEG 456
            A  L+    K V+CG + +  ++  GKVF WG  +   +G  D        P +V ++ G
Sbjct: 2039 A--LQGHVIKKVACGTQFSVALSKYGKVFTWGQERL--IGQPDTRGGSNCQPQEVASLSG 2094

Query: 457  CVPRNVACGWWHTLLLA 473
                +V CG  HTL+L 
Sbjct: 2095 YFIEDVVCGAEHTLVLT 2111



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 64/183 (34%), Positives = 105/183 (57%), Gaps = 7/183 (3%)

Query: 296  RVPG-NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQI 354
            RVP  +  + I CG   + V+ + G +L  G G YG+ GQG++DD  S   +SS+ G  +
Sbjct: 1826 RVPSFSCSQQIVCGQNCTFVVQNNGTVLACGEGSYGRLGQGNSDDLHSLTAISSIQGFVV 1885

Query: 355  EGVAAGL---WHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSV 411
              +A  +    HT+ ++  G+V+++G   +G+LG G    +  PR ++A   E V    +
Sbjct: 1886 TQLATSVGSDGHTLAVTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEV--IQL 1943

Query: 412  SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
            SCG +H+AV+  DGK+F +G   YG+LGLG   ++ +P++V  +E      VACG  HTL
Sbjct: 1944 SCGFKHSAVVTADGKLFTFGNGDYGRLGLGTTTNKKVPTRVVALESHQIGYVACGLNHTL 2003

Query: 471  LLA 473
             ++
Sbjct: 2004 CVS 2006



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 149/368 (40%), Gaps = 78/368 (21%)

Query: 36   VRLPLTVGSAWRDVCGGGCGFAMAISD--------SRKLITWGSTDDLGQSYVTSGKHGE 87
            VR+P +   + + VCG  C F +  +         S   +  G++DDL      S   G 
Sbjct: 1825 VRVP-SFSCSQQIVCGQNCTFVVQNNGTVLACGEGSYGRLGQGNSDDLHSLTAISSIQGF 1883

Query: 88   IPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDV 147
            +           +  +     H +AVTE GEV++WG  +       +G L  G   D+  
Sbjct: 1884 VV--------TQLATSVGSDGHTLAVTESGEVFSWGDGD-------YGKLGHGNS-DRQR 1927

Query: 148  FERQSSFLT-EQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAESSS 202
              RQ   L  E+V   S   + S   ++  DG+    G+G+ G    R+ L   T +   
Sbjct: 1928 RPRQIEALQGEEVIQLSCGFKHSAVVTA--DGKLFTFGNGDYG----RLGLGTTTNKK-- 1979

Query: 203  SGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIG-QVWGWGYGGEGQLGLGSRIRM 261
                     P  V      +I  VA G  HTL +S  G  VW +G G  G+LG G+ +  
Sbjct: 1980 --------VPTRVVALESHQIGYVACGLNHTLCVSADGTNVWAFGDGDFGKLGQGNTV-- 2029

Query: 262  VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
                          GK     +             + G+ +K +ACG + S  ++  G +
Sbjct: 2030 --------------GKHLPTKIKA-----------LQGHVIKKVACGTQFSVALSKYGKV 2064

Query: 322  LTFGWGLYGQCGQGSTD--DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN 379
              F WG     GQ  T       P  V+SL G  IE V  G  HT+ ++SDGDV+ +G N
Sbjct: 2065 --FTWGQERLIGQPDTRGGSNCQPQEVASLSGYFIEDVVCGAEHTLVLTSDGDVWGWGSN 2122

Query: 380  QFGQLGTG 387
              GQLG G
Sbjct: 2123 SEGQLGLG 2130



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 66/265 (24%), Positives = 105/265 (39%), Gaps = 57/265 (21%)

Query: 52   GGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEA----SIVKAAAGW 107
            G  G  +A+++S ++ +WG  D     Y   G      +  P   EA     +++ + G+
Sbjct: 1893 GSDGHTLAVTESGEVFSWGDGD-----YGKLGHGNSDRQRRPRQIEALQGEEVIQLSCGF 1947

Query: 108  AHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS-----PR 162
             H   VT  G+++T+G  +       +G L  GT  +K V  R  +  + Q+        
Sbjct: 1948 KHSAVVTADGKLFTFGNGD-------YGRLGLGTTTNKKVPTRVVALESHQIGYVACGLN 2000

Query: 163  SQVSRSSGGTSS--------GTDGRGS-----------GEEGSKRRRISLAKQTAESSSS 203
              +  S+ GT+         G  G+G+             +G   ++++   Q + + S 
Sbjct: 2001 HTLCVSADGTNVWAFGDGDFGKLGQGNTVGKHLPTKIKALQGHVIKKVACGTQFSVALSK 2060

Query: 204  -------GDENL----------SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWG 246
                   G E L          +  P  V    G  I  V  G  HTL L+  G VWGWG
Sbjct: 2061 YGKVFTWGQERLIGQPDTRGGSNCQPQEVASLSGYFIEDVVCGAEHTLVLTSDGDVWGWG 2120

Query: 247  YGGEGQLGLGSRIRMVSSPHPIPCI 271
               EGQLGLG     V  P  +PC+
Sbjct: 2121 SNSEGQLGLGHTNSPVREPQLVPCL 2145


>gi|443690304|gb|ELT92472.1| hypothetical protein CAPTEDRAFT_172844 [Capitella teleta]
          Length = 4817

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 83/251 (33%), Positives = 126/251 (50%), Gaps = 32/251 (12%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            +R   + +GG+H LALS  G+V+ WG G +G+LG G+R          PC       DR 
Sbjct: 4023 IRKVAINSGGKHCLALSAEGEVYSWGEGEDGKLGHGNR---------SPC-------DRP 4066

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
             A+             + G  V  IA GG HSA IT  G L ++G G YG+ G G ++D+
Sbjct: 4067 RAIE-----------SLRGKEVVDIAAGGAHSACITSTGELYSWGKGRYGRLGHGDSEDQ 4115

Query: 341  LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
              P  V +L G ++  VA  +G   T+CI+ D  V+++G   +G+LG GG     +P  +
Sbjct: 4116 TKPKLVDALKGYRVTDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDGCKVPMKI 4175

Query: 399  DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ-VTIEGC 457
            DA  L+ +    V CG++ +  +   G V+ WG   Y +LG G       P +  T++G 
Sbjct: 4176 DA--LQGLGVIKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGTEDHIRRPRRCTTLQGK 4233

Query: 458  VPRNVACGWWH 468
               ++ACG  H
Sbjct: 4234 KIVSIACGSLH 4244



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/255 (33%), Positives = 126/255 (49%), Gaps = 34/255 (13%)

Query: 221 VRIATVAAG--GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
           + I  +AA   G H LAL+  G V+ WG G  G+LG G  +    SP  I          
Sbjct: 476 IEIIKLAAHSEGSHCLALTSEGDVYSWGNGDFGKLGHGDTV-TCDSPMLIN--------- 525

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
                             + G  V  +ACG  HSA IT +G L T+G G +G+ G GST+
Sbjct: 526 -----------------ELHGKSVVNVACGSHHSAAITASGELFTWGRGSFGRLGLGSTE 568

Query: 339 DELSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPR 396
           D L+P  VS LLG+ +  VA  +G   TI ++  G VY++G  ++G+LG GG +    P+
Sbjct: 569 DILTPALVSGLLGVTVVDVACGSGDAQTIALADTGSVYSWGDGEYGKLGRGGSEGCKAPK 628

Query: 397 LLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIE 455
           L+D   L+ +    V CG +++A +  +G VF WG  +  +LG G       P QV T+ 
Sbjct: 629 LVD--KLQGLDVTRVYCGPQYSAAVCKNGAVFTWGNGEGYKLGHGTEEHVRFPRQVETLA 686

Query: 456 GCVPRNVACGWWHTL 470
           G    +++ G  H L
Sbjct: 687 GKHVTSLSLGSHHCL 701



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/303 (28%), Positives = 126/303 (41%), Gaps = 80/303 (26%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            ++   V +GGRH +AL+  G+V+ WG G +G+LG  SR+     P  I  + S       
Sbjct: 3002 IKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALRS------- 3053

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                 V+ IACGG HSA I   G L T+G G YG+ G G    +
Sbjct: 3054 -------------------KRVRDIACGGSHSAAIISNGDLYTWGLGEYGRLGHGDNTTQ 3094

Query: 341  LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V +L G ++  VA G     T+ ++  G VY++G   FG+LG GG +  ++P  +
Sbjct: 3095 LRPKLVKALEGQRVIQVALGSRDAQTLALTDSGTVYSWGDGDFGKLGRGGSEGCSVPHPI 3154

Query: 399  D----------------------------------------------APSL-ENVHSKSV 411
            +                                               P L E +  K V
Sbjct: 3155 ERLNGVGVCQIECGAQFSLALTKSGQVWTWGKGDYFRLGHGTDAHVRKPQLVETLKGKKV 3214

Query: 412  S---CGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWW 467
            +    GA H   + D+G+V+ WG N +GQ G         P+ V  +EGC    VACG  
Sbjct: 3215 THVAVGALHCLSVLDNGQVYAWGDNDHGQQGNSTTTVNRKPALVQGLEGCKISRVACGSS 3274

Query: 468  HTL 470
            H++
Sbjct: 3275 HSI 3277



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 122/256 (47%), Gaps = 32/256 (12%)

Query: 240  GQVWGWGYGGEGQLG--LGSRIRM------VSSPHPIP-----------------CIESS 274
            GQ+WGWG+   GQLG   G+++++      +++  P+                  C    
Sbjct: 3936 GQIWGWGHNHRGQLGGVEGAKVKLPVSCETLATMRPVQLIGGEQTLFSITGDGKVCATGY 3995

Query: 275  YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIAC--GGRHSAVITDAGALLTFGWGLYGQC 332
                R       SV +      +   +++ +A   GG+H   ++  G + ++G G  G+ 
Sbjct: 3996 GAGGRLGIGGTDSVATPTLIESIQHVFIRKVAINSGGKHCLALSAEGEVYSWGEGEDGKL 4055

Query: 333  GQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAE 392
            G G+      P  + SL G ++  +AAG  H+ CI+S G++Y++G  ++G+LG G  + +
Sbjct: 4056 GHGNRSPCDRPRAIESLRGKEVVDIAAGGAHSACITSTGELYSWGKGRYGRLGHGDSEDQ 4115

Query: 393  TLPRLLDAPSLENVHSKSVSCGA--RHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
            T P+L+DA  L+      V+CG+    T  I DD  V+ WG   YG+LG G      +P 
Sbjct: 4116 TKPKLVDA--LKGYRVTDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDGCKVPM 4173

Query: 451  QV-TIEGCVPRNVACG 465
            ++  ++G     V CG
Sbjct: 4174 KIDALQGLGVIKVECG 4189



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/217 (32%), Positives = 93/217 (42%), Gaps = 31/217 (14%)

Query: 204  GDENLSAFPCLVTLNPGVRIATVAAGGR--HTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
            GD      P LV    G R+  VA G R   TLAL+D G V+ WG G  G+LG G     
Sbjct: 3089 GDNTTQLRPKLVKALEGQRVIQVALGSRDAQTLALTDSGTVYSWGDGDFGKLGRGGS-EG 3147

Query: 262  VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
             S PHPI                           R+ G  V  I CG + S  +T +G +
Sbjct: 3148 CSVPHPIE--------------------------RLNGVGVCQIECGAQFSLALTKSGQV 3181

Query: 322  LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             T+G G Y + G G+      P  V +L G ++  VA G  H + +  +G VYA+G N  
Sbjct: 3182 WTWGKGDYFRLGHGTDAHVRKPQLVETLKGKKVTHVAVGALHCLSVLDNGQVYAWGDNDH 3241

Query: 382  GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
            GQ G         P L+    LE      V+CG+ H+
Sbjct: 3242 GQQGNSTTTVNRKPALVQG--LEGCKISRVACGSSHS 3276



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 102/366 (27%), Positives = 147/366 (40%), Gaps = 84/366 (22%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V   +G  HC+A++  GEVY+WG  E         D   G G ++   +R  +   E + 
Sbjct: 4026 VAINSGGKHCLALSAEGEVYSWGEGE---------DGKLGHG-NRSPCDRPRAI--ESLR 4073

Query: 161  PRSQVSRSSGGTSSGTDGRGSGEEGS--KRRRISLAKQTAESSSSGDENLSAFPCLVTLN 218
             +  V  ++GG  S      +GE  S  K R   L          GD      P LV   
Sbjct: 4074 GKEVVDIAAGGAHSACIT-STGELYSWGKGRYGRLGH--------GDSEDQTKPKLVDAL 4124

Query: 219  PGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYG 276
             G R+  VA  +G   TL ++D   VW WG G  G+LG G                   G
Sbjct: 4125 KGYRVTDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRG-------------------G 4165

Query: 277  KDRSAALSRGSVNSEGPGFRVPGNY-------VKGIACGGRHSAVITDAGALLTFGWGLY 329
             D               G +VP          V  + CG + S  +T +GA+ T+G G Y
Sbjct: 4166 SD---------------GCKVPMKIDALQGLGVIKVECGSQFSVALTKSGAVYTWGKGDY 4210

Query: 330  GQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD 389
             + G G+ D    P   ++L G +I  +A G  H +  +  G+VY +G N  GQLG G  
Sbjct: 4211 HRLGHGTEDHIRRPRRCTTLQGKKIVSIACGSLHCVACTDAGEVYTWGDNDEGQLGDGTT 4270

Query: 390  QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIP 449
             A   PRL+ A  L+      V+CG+ H+           W  NK    G        +P
Sbjct: 4271 NAIQRPRLVAA--LQGKKINRVACGSAHS---------LAWSTNKPVNAG-------KLP 4312

Query: 450  SQVTIE 455
            +Q+ +E
Sbjct: 4313 AQIPME 4318



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 107/239 (44%), Gaps = 38/239 (15%)

Query: 205  DENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSS 264
            +E LS   C+           +  G +    ++  G+++  G    G+LGLG     V  
Sbjct: 2941 NETLSTLKCV----------QIVGGSKSLFCVTQDGKLFACGEATNGRLGLGISAGNVPQ 2990

Query: 265  PHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTF 324
            P  +  + S Y       + + +V+S                 GGRH+  +T  G + ++
Sbjct: 2991 PRQLTSL-SQY------VIKKVAVHS-----------------GGRHAMALTVDGKVFSW 3026

Query: 325  GWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQL 384
            G G  G+ G  S  +   P  + +L   ++  +A G  H+  I S+GD+Y +G  ++G+L
Sbjct: 3027 GEGDDGKLGHFSRMNCDKPRLIEALRSKRVRDIACGGSHSAAIISNGDLYTWGLGEYGRL 3086

Query: 385  GTGGDQAETLPRLLDAPSLENVHSKSVSCGAR--HTAVIADDGKVFCWGWNKYGQLGLG 441
            G G +  +  P+L+ A  LE      V+ G+R   T  + D G V+ WG   +G+LG G
Sbjct: 3087 GHGDNTTQLRPKLVKA--LEGQRVIQVALGSRDAQTLALTDSGTVYSWGDGDFGKLGRG 3143



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 83/301 (27%), Positives = 131/301 (43%), Gaps = 62/301 (20%)

Query: 97  EASIVKAAAGW--AHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSF 154
           +  I+K AA    +HC+A+T  G+VY+WG  +       FG L  G     D     S  
Sbjct: 475 DIEIIKLAAHSEGSHCLALTSEGDVYSWGNGD-------FGKLGHG-----DTVTCDSPM 522

Query: 155 LTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRR----RISLAKQTAESSSSGDENLSA 210
           L  ++  +S V+ + G   S      SGE  +  R    R+ L         S ++ L+ 
Sbjct: 523 LINELHGKSVVNVACGSHHSAAIT-ASGELFTWGRGSFGRLGLG--------STEDILT- 572

Query: 211 FPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
            P LV+   GV +  VA  +G   T+AL+D G V+ WG G  G+LG G            
Sbjct: 573 -PALVSGLLGVTVVDVACGSGDAQTIALADTGSVYSWGDGEYGKLGRG------------ 619

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITDAGALLTFGW 326
                            GS   + P    ++ G  V  + CG ++SA +   GA+ T+G 
Sbjct: 620 -----------------GSEGCKAPKLVDKLQGLDVTRVYCGPQYSAAVCKNGAVFTWGN 662

Query: 327 GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
           G   + G G+ +    P  V +L G  +  ++ G  H +  + +G++ ++G N  GQLG 
Sbjct: 663 GEGYKLGHGTEEHVRFPRQVETLAGKHVTSLSLGSHHCLATTEEGELLSWGRNDKGQLGE 722

Query: 387 G 387
           G
Sbjct: 723 G 723



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 82/310 (26%), Positives = 121/310 (39%), Gaps = 47/310 (15%)

Query: 57   AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEG 116
            AMA++   K+ +WG  DD G+    S  + + P          +   A G +H  A+   
Sbjct: 3014 AMALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRLIEALRSKRVRDIACGGSHSAAIISN 3072

Query: 117  GEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGT 176
            G++YTWG  E    GR  G     T L   + +        QV+  S+ +++   T SGT
Sbjct: 3073 GDLYTWGLGE---YGR-LGHGDNTTQLRPKLVKALEGQRVIQVALGSRDAQTLALTDSGT 3128

Query: 177  DGR-GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLA 235
                G G+ G   R              G E  S    +  LN GV +  +  G + +LA
Sbjct: 3129 VYSWGDGDFGKLGR-------------GGSEGCSVPHPIERLN-GVGVCQIECGAQFSLA 3174

Query: 236  LSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF 295
            L+  GQVW WG G   +LG G+    V  P  +  ++                       
Sbjct: 3175 LTKSGQVWTWGKGDYFRLGHGTDAH-VRKPQLVETLK----------------------- 3210

Query: 296  RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
               G  V  +A G  H   + D G +  +G   +GQ G  +T     P  V  L G +I 
Sbjct: 3211 ---GKKVTHVAVGALHCLSVLDNGQVYAWGDNDHGQQGNSTTTVNRKPALVQGLEGCKIS 3267

Query: 356  GVAAGLWHTI 365
             VA G  H+I
Sbjct: 3268 RVACGSSHSI 3277



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 82/194 (42%), Gaps = 15/194 (7%)

Query: 283  LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTDDE 340
            L+  +   E  G R      K + CG     + T       F WGL    Q G       
Sbjct: 2881 LASDNEEEEAEGQRASQVMAKKVKCGSGVKDIQTQ-----VFVWGLNDKDQLGGPKGSKI 2935

Query: 341  LSP---NCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAET-LPR 396
             +P     +S+L  +QI G +  L+   C++ DG ++A G    G+LG G        PR
Sbjct: 2936 KTPGINETLSTLKCVQIVGGSKSLF---CVTQDGKLFACGEATNGRLGLGISAGNVPQPR 2992

Query: 397  LLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIE 455
             L + S   +   +V  G RH   +  DGKVF WG    G+LG    ++ + P  +  + 
Sbjct: 2993 QLTSLSQYVIKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALR 3052

Query: 456  GCVPRNVACGWWHT 469
                R++ACG  H+
Sbjct: 3053 SKRVRDIACGGSHS 3066



 Score = 42.7 bits (99), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 35/73 (47%), Gaps = 5/73 (6%)

Query: 53   GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTE--ASIVKAAAGWAHC 110
            G  F++A++ S  + TWG  D      +  G    I  P    T     IV  A G  HC
Sbjct: 4189 GSQFSVALTKSGAVYTWGKGD---YHRLGHGTEDHIRRPRRCTTLQGKKIVSIACGSLHC 4245

Query: 111  VAVTEGGEVYTWG 123
            VA T+ GEVYTWG
Sbjct: 4246 VACTDAGEVYTWG 4258



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 3/77 (3%)

Query: 49   VCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAG 106
            VC   CG  F++A++ S ++ TWG  D     + T   H   P+         +   A G
Sbjct: 3162 VCQIECGAQFSLALTKSGQVWTWGKGDYFRLGHGTDA-HVRKPQLVETLKGKKVTHVAVG 3220

Query: 107  WAHCVAVTEGGEVYTWG 123
              HC++V + G+VY WG
Sbjct: 3221 ALHCLSVLDNGQVYAWG 3237


>gi|242004863|ref|XP_002423296.1| hypothetical protein Phum_PHUM047680 [Pediculus humanus corporis]
 gi|212506298|gb|EEB10558.1| hypothetical protein Phum_PHUM047680 [Pediculus humanus corporis]
          Length = 1229

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/250 (31%), Positives = 124/250 (49%), Gaps = 33/250 (13%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            + +  VA G  HT AL++ G V+ WG    GQLGLG    +  SP+P   + +S   +  
Sbjct: 877  LEVLYVACGKNHTTALTNNG-VYAWGCSKYGQLGLGD---VYESPYPR--LITSLANENV 930

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
              LS                      CG  H+  +T+ G +  +GWG++GQ G G+ DD+
Sbjct: 931  ITLS----------------------CGQFHTLALTEKGQVFAWGWGVHGQLGLGNIDDQ 968

Query: 341  LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
              P CV+ L    I+ +AAG  H++ +S  G +++FG   FGQLGTG     ++P L+  
Sbjct: 969  RLPVCVNHLKDQVIKDIAAGHGHSLVLSDKGQIFSFGSGVFGQLGTGNTTKSSVPVLIQG 1028

Query: 401  PSLENV-----HSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
             S + +     +  S+SCG  H+A++   G V+ WG +  GQLG G   +   P+Q+   
Sbjct: 1029 ISEKIILIATGYFHSISCGCHHSALLTVSGGVYTWGRSLDGQLGNGGHKEVTAPTQINEN 1088

Query: 456  GCVPRNVACG 465
                  ++CG
Sbjct: 1089 TFKADCISCG 1098



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 122/249 (48%), Gaps = 40/249 (16%)

Query: 204  GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
            GD   S +P L+T      + T++ G  HTLAL++ GQV+ WG+G  GQLGLG+    + 
Sbjct: 911  GDVYESPYPRLITSLANENVITLSCGQFHTLALTEKGQVFAWGWGVHGQLGLGN----ID 966

Query: 264  SPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLT 323
                  C+  ++ KD+                      +K IA G  HS V++D G + +
Sbjct: 967  DQRLPVCV--NHLKDQ---------------------VIKDIAAGHGHSLVLSDKGQIFS 1003

Query: 324  FGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTI--------CISSDGDVYA 375
            FG G++GQ G G+T     P  +   +  +I  +A G +H+I         ++  G VY 
Sbjct: 1004 FGSGVFGQLGTGNTTKSSVPVLIQG-ISEKIILIATGYFHSISCGCHHSALLTVSGGVYT 1062

Query: 376  FGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD-GKVFCWGWNK 434
            +G +  GQLG GG +  T P  ++  + +   +  +SCG   TA      GK+FCWG N 
Sbjct: 1063 WGRSLDGQLGNGGHKEVTAPTQINENTFK---ADCISCGCEFTAAQEKQTGKIFCWGSNS 1119

Query: 435  YGQLGLGDV 443
             GQ+ + ++
Sbjct: 1120 VGQVRVTNL 1128


>gi|298710216|emb|CBJ26291.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 1089

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 143/300 (47%), Gaps = 38/300 (12%)

Query: 209 SAFPCLVT--LNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS--------R 258
           S  PC V   L P  RIA V  G  HT AL+  G V G+G G +GQLG+G+        R
Sbjct: 30  SFLPCRVAFQLAPTQRIAEVFCGYEHTFALTSDGDVLGFGNGVKGQLGIGNTDSHSNPQR 89

Query: 259 IRMVSSP----------HPIPCIES----SYGKDRSAALSRGS--VNSEGPGFRVP---G 299
           + ++S            H +   ES    ++G + S  L  G      E    +VP    
Sbjct: 90  VHLLSGKGVVKMAAGLEHSLALTESGDLYAFGDNLSGQLGLGHNFTAKEQTPQKVPPLGR 149

Query: 300 NYVKGIACGGRHSAVITDAGALLTFG------WGLYGQCGQGSTDDELSPNCVSSLLGIQ 353
             +  +ACG  H+AV+T +G L  FG       G+ G   +G      +P  V+ L G  
Sbjct: 150 AKITQLACGQDHTAVLTSSGELFMFGNNRDGALGVAGHANEGPPIVASAPQLVTGLKGKH 209

Query: 354 IEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSC 413
           +  +  GL HT+ +++ G VY +G N  GQLGTG  Q    P L+  P L       V+C
Sbjct: 210 VVQIGCGLQHTVALTAAGGVYCWGENGRGQLGTGDTQNRYTPSLVCKP-LSAFKCIHVAC 268

Query: 414 GARHTAVIADDGKVFCWGWNKYGQLGLGDV-IDRNIPSQ-VTIEGCVPRNVACGWWHTLL 471
           G +HT  + D   V+ +G +++GQLGLG   +   +P++ V + G   +N   G WHT++
Sbjct: 269 GGQHTIAVTDCDDVYGFGSDRHGQLGLGRRGVIVPVPTRIVRLGGRRVKNCVGGAWHTII 328



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/182 (34%), Positives = 92/182 (50%), Gaps = 7/182 (3%)

Query: 298 PGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGV 357
           P   +  + CG  H+  +T  G +L FG G+ GQ G G+TD   +P  V  L G  +  +
Sbjct: 42  PTQRIAEVFCGYEHTFALTSDGDVLGFGNGVKGQLGIGNTDSHSNPQRVHLLSGKGVVKM 101

Query: 358 AAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARH 417
           AAGL H++ ++  GD+YAFG N  GQLG G +           P L       ++CG  H
Sbjct: 102 AAGLEHSLALTESGDLYAFGDNLSGQLGLGHNFTAKEQTPQKVPPLGRAKITQLACGQDH 161

Query: 418 TAVIADDGKVFCWGWNKYGQLGL------GDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
           TAV+   G++F +G N+ G LG+      G  I  + P  VT ++G     + CG  HT+
Sbjct: 162 TAVLTSSGELFMFGNNRDGALGVAGHANEGPPIVASAPQLVTGLKGKHVVQIGCGLQHTV 221

Query: 471 LL 472
            L
Sbjct: 222 AL 223



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 76/298 (25%), Positives = 122/298 (40%), Gaps = 54/298 (18%)

Query: 89  PEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVF 148
           P+   L +   +VK AAG  H +A+TE G++Y +G            +LS   GL  +  
Sbjct: 87  PQRVHLLSGKGVVKMAAGLEHSLALTESGDLYAFG-----------DNLSGQLGLGHNFT 135

Query: 149 ERQSSFLTEQVSP--RSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDE 206
            ++ +   ++V P  R+++++ + G         SGE          A   A  ++ G  
Sbjct: 136 AKEQT--PQKVPPLGRAKITQLACGQDHTAVLTSSGELFMFGNNRDGALGVAGHANEGPP 193

Query: 207 NLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR-----M 261
            +++ P LVT   G  +  +  G +HT+AL+  G V+ WG  G GQLG G         +
Sbjct: 194 IVASAPQLVTGLKGKHVVQIGCGLQHTVALTAAGGVYCWGENGRGQLGTGDTQNRYTPSL 253

Query: 262 VSSP-HPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA 320
           V  P     CI                                 +ACGG+H+  +TD   
Sbjct: 254 VCKPLSAFKCIH--------------------------------VACGGQHTIAVTDCDD 281

Query: 321 LLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
           +  FG   +GQ G G     +  P  +  L G +++    G WHTI  +  G+ Y  G
Sbjct: 282 VYGFGSDRHGQLGLGRRGVIVPVPTRIVRLGGRRVKNCVGGAWHTIIGTVTGEQYIMG 339


>gi|307193259|gb|EFN76150.1| Probable E3 ubiquitin-protein ligase HERC4 [Harpegnathos saltator]
          Length = 1054

 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 96/299 (32%), Positives = 133/299 (44%), Gaps = 37/299 (12%)

Query: 205 DENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLG---SRIRM 261
           DEN+   P  V       I  +A G  +T+A++  GQV+  G    GQLG      R+++
Sbjct: 19  DENIFT-PREVNFEKANEIEQIACGDNYTIAVTKEGQVYSCGNNDHGQLGQEKGRKRLQL 77

Query: 262 VSSPHPIPC-------------------------IESSYGKDRSAALSRGSVNSEGPGFR 296
           +S   P+                           +E   G DR +A  R     +  G +
Sbjct: 78  ISGIDPLAFRKAACGSSHTLVVNEWGQLFSWGSNVEGQLGLDRVSATIREPRMVKTLGTK 137

Query: 297 VPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGS-TDDELSPNCVSSLLGIQIE 355
           +    +  IACG +HS  +T+ G L  +G    GQ G GS T  EL P  V SL  + I 
Sbjct: 138 I----IVQIACGLKHSIALTNNGELYAWGSNSDGQLGLGSDTKMELKPKLVHSLAAVPIA 193

Query: 356 GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGA 415
            VA G +HTI IS  G V+A+G N FGQLG    Q   +P  L   +L N      +CG 
Sbjct: 194 FVACGGYHTIVISKSGAVFAWGRNTFGQLGLSDIQNRNVPCQLR--TLRNSRVCYAACGE 251

Query: 416 RHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLA 473
             +  +  DG VF  G   YGQLG G+     +P Q+  + G     ++CG  HTL L 
Sbjct: 252 EFSVFLTMDGGVFTCGAGMYGQLGHGNKTSEILPRQIMELMGSTVTQISCGRRHTLALV 310



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 66/218 (30%), Positives = 106/218 (48%), Gaps = 29/218 (13%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  +A G +H++AL++ G+++ WG   +GQLGLGS  +M   P  +  + +         
Sbjct: 139 IVQIACGLKHSIALTNNGELYAWGSNSDGQLGLGSDTKMELKPKLVHSLAA--------- 189

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                         VP   +  +ACGG H+ VI+ +GA+  +G   +GQ G     +   
Sbjct: 190 --------------VP---IAFVACGGYHTIVISKSGAVFAWGRNTFGQLGLSDIQNRNV 232

Query: 343 PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPS 402
           P  + +L   ++   A G   ++ ++ DG V+  G   +GQLG G   +E LPR +    
Sbjct: 233 PCQLRTLRNSRVCYAACGEEFSVFLTMDGGVFTCGAGMYGQLGHGNKTSEILPRQI--ME 290

Query: 403 LENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLG 439
           L       +SCG RHT A++   G+V+ WG    GQLG
Sbjct: 291 LMGSTVTQISCGRRHTLALVPSRGRVYAWGLGGAGQLG 328



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 81/303 (26%), Positives = 126/303 (41%), Gaps = 49/303 (16%)

Query: 102 KAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS- 160
           KAA G +H + V E G++++WG       G++  D  + T  +  + +   + +  Q++ 
Sbjct: 88  KAACGSSHTLVVNEWGQLFSWGSN---VEGQLGLDRVSATIREPRMVKTLGTKIIVQIAC 144

Query: 161 -PRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
             +  ++ ++ G          G+ G                   D  +   P LV    
Sbjct: 145 GLKHSIALTNNGELYAWGSNSDGQLGL----------------GSDTKMELKPKLVHSLA 188

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
            V IA VA GG HT+ +S  G V+ WG    GQLGL            +PC      + R
Sbjct: 189 AVPIAFVACGGYHTIVISKSGAVFAWGRNTFGQLGLSD-----IQNRNVPC------QLR 237

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDD 339
           +   SR                V   ACG   S  +T  G + T G G+YGQ G G+   
Sbjct: 238 TLRNSR----------------VCYAACGEEFSVFLTMDGGVFTCGAGMYGQLGHGNKTS 281

Query: 340 ELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           E+ P  +  L+G  +  ++ G  HT+  + S G VYA+G    GQLG    Q  T P+++
Sbjct: 282 EILPRQIMELMGSTVTQISCGRRHTLALVPSRGRVYAWGLGGAGQLGNRIAQNSTTPQVV 341

Query: 399 DAP 401
             P
Sbjct: 342 FGP 344



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 53/157 (33%), Positives = 82/157 (52%), Gaps = 12/157 (7%)

Query: 324 FGWG--LYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN 379
           F WG  ++G+ G G  +DE   +P  V+     +IE +A G  +TI ++ +G VY+ G N
Sbjct: 2   FCWGSTIHGELGLGGIEDENIFTPREVNFEKANEIEQIACGDNYTIAVTKEGQVYSCGNN 61

Query: 380 QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG 439
             GQLG    Q +   RL     ++ +  +  +CG+ HT V+ + G++F WG N  GQLG
Sbjct: 62  DHGQLG----QEKGRKRLQLISGIDPLAFRKAACGSSHTLVVNEWGQLFSWGSNVEGQLG 117

Query: 440 LGDVIDRNI--PSQVTIEGC-VPRNVACGWWHTLLLA 473
           L D +   I  P  V   G  +   +ACG  H++ L 
Sbjct: 118 L-DRVSATIREPRMVKTLGTKIIVQIACGLKHSIALT 153



 Score = 42.4 bits (98), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 90/227 (39%), Gaps = 36/227 (15%)

Query: 37  RLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEI-PEPFPLP 95
           R+  T+G+        G   ++A++++ +L  WGS  D GQ  + S    E+ P+     
Sbjct: 129 RMVKTLGTKIIVQIACGLKHSIALTNNGELYAWGSNSD-GQLGLGSDTKMELKPKLVHSL 187

Query: 96  TEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFL 155
               I   A G  H + +++ G V+ WG          FG L      +++V  +  +  
Sbjct: 188 AAVPIAFVACGGYHTIVISKSGAVFAWG-------RNTFGQLGLSDIQNRNVPCQLRTLR 240

Query: 156 TEQVSPRS-------QVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENL 208
             +V   +        ++   G  + G    G    G+K   I L +Q  E         
Sbjct: 241 NSRVCYAACGEEFSVFLTMDGGVFTCGAGMYGQLGHGNKTSEI-LPRQIMELM------- 292

Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLAL-SDIGQVWGWGYGGEGQLG 254
                      G  +  ++ G RHTLAL    G+V+ WG GG GQLG
Sbjct: 293 -----------GSTVTQISCGRRHTLALVPSRGRVYAWGLGGAGQLG 328


>gi|348676014|gb|EGZ15832.1| hypothetical protein PHYSODRAFT_315997 [Phytophthora sojae]
          Length = 614

 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 102/316 (32%), Positives = 143/316 (45%), Gaps = 36/316 (11%)

Query: 192 SLAKQTAESSSSGDENLSAFPCLVTL---NPGVRIATVAAGGRHTLALSDIGQVWGWGYG 248
           S  + T    + GD    + P  V L   N G R+  VA G   T  L + G V+  GY 
Sbjct: 35  SFGQNTYGELALGDTTDRSAPIRVDLGNSNHGRRVVDVACGNEQTAILFEDGDVYTCGYN 94

Query: 249 GEGQLGLGSRIRM--------VSSPHPIPCIESSYGKDRSAAL-SRGSVNSEGPGFR--- 296
             GQ  +G+  R+        +SS   +  I S  G +  AAL + G++ + G   R   
Sbjct: 95  DSGQCAIGTTERVPTLRFSPGLSSNRTVR-IFSGNGSEHLAALHANGNLYTVGFNMRGQL 153

Query: 297 ----------------VPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDD- 339
                           + G  V  + C   H+A++ D G L   G   YGQ G G   + 
Sbjct: 154 GLGSSTTVMEATLVEELAGKRVADVGCSYFHTAIVMDNGDLYACGCNDYGQLGLGDHRNG 213

Query: 340 ELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGG-DQAETLPRLL 398
           EL P  V       +  VA G  +TI    DG V AFG N  GQLG     +  + P  L
Sbjct: 214 ELVPRPVEYFFRRPVLAVACGQHYTIASLRDGGVVAFGKNDHGQLGLDSTSEPVSQPTRL 273

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGC 457
            AP L+ +    +SCG  HTAV+ +DG V+ +G N YGQLGLG  +    P++V ++   
Sbjct: 274 AAP-LDRLVVPQLSCGYHHTAVVTEDGAVYTFGRNDYGQLGLGHKMHMARPARVESLARM 332

Query: 458 VPRNVACGWWHTLLLA 473
               VACG +HTL+L+
Sbjct: 333 RITQVACGCYHTLVLS 348



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 83/265 (31%), Positives = 121/265 (45%), Gaps = 31/265 (11%)

Query: 214 LVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES 273
           LV    G R+A V     HT  + D G ++  G    GQLGLG        P P+     
Sbjct: 166 LVEELAGKRVADVGCSYFHTAIVMDNGDLYACGCNDYGQLGLGDHRNGELVPRPVEYF-- 223

Query: 274 SYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCG 333
                                FR P   V  +ACG  ++      G ++ FG   +GQ G
Sbjct: 224 ---------------------FRRP---VLAVACGQHYTIASLRDGGVVAFGKNDHGQLG 259

Query: 334 QGSTDDELS-PNCVSSLLG-IQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
             ST + +S P  +++ L  + +  ++ G  HT  ++ DG VY FG N +GQLG G    
Sbjct: 260 LDSTSEPVSQPTRLAAPLDRLVVPQLSCGYHHTAVVTEDGAVYTFGRNDYGQLGLGHKMH 319

Query: 392 ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
              P  ++  SL  +    V+CG  HT V++DDGKVF +G N +GQLGL   +D   P  
Sbjct: 320 MARPARVE--SLARMRITQVACGCYHTLVLSDDGKVFPFGRNNHGQLGLETSVDCLSPQL 377

Query: 452 V-TIEGCVPRNVACGWWHTLLLAVP 475
           + T+       VA G++H++ L  P
Sbjct: 378 ISTLRNKTVTKVAAGFYHSVCLVGP 402



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 79/166 (47%), Gaps = 12/166 (7%)

Query: 315 ITDAGALLTFGWGLYGQCGQGSTDDELSPNCV---SSLLGIQIEGVAAGLWHTICISSDG 371
           + +   + +FG   YG+   G T D  +P  V   +S  G ++  VA G   T  +  DG
Sbjct: 27  VLEVEGVYSFGQNTYGELALGDTTDRSAPIRVDLGNSNHGRRVVDVACGNEQTAILFEDG 86

Query: 372 DVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSC--GARHTAVIADDGKVFC 429
           DVY  G N  GQ   G    E +P L  +P L +  +  +    G+ H A +  +G ++ 
Sbjct: 87  DVYTCGYNDSGQCAIG--TTERVPTLRFSPGLSSNRTVRIFSGNGSEHLAALHANGNLYT 144

Query: 430 WGWNKYGQLGLGD---VIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
            G+N  GQLGLG    V++  +  +  + G    +V C ++HT ++
Sbjct: 145 VGFNMRGQLGLGSSTTVMEATLVEE--LAGKRVADVGCSYFHTAIV 188


>gi|410957260|ref|XP_003985249.1| PREDICTED: LOW QUALITY PROTEIN: E3 ISG15--protein ligase HERC5
           [Felis catus]
          Length = 1143

 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 85/268 (31%), Positives = 130/268 (48%), Gaps = 33/268 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHP------IPCIESSYG 276
           I  +  G  H+LALS  G+++ WG    GQLG+GS+   ++ P        IP ++ S G
Sbjct: 258 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGIGSQFASIAIPQIVENLSGIPLVQISAG 317

Query: 277 KDRSAALSR-GSV--------------NSEGPGF-----RVPGNYVKGIACGGRHSAVIT 316
           K  S ALS  G++              +++G  F      +    V+ +ACGG H+A++T
Sbjct: 318 KAHSMALSMSGNIYSWGRNDFGQLGLGHTDGKDFPSLIEALDNQKVEFLACGGSHTALLT 377

Query: 317 DAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD-GDVYA 375
             G + TFG G +GQ G  ST +EL P  V+ L G ++  +A G  HT+   SD G V++
Sbjct: 378 KDGLVFTFGAGKHGQLGHNSTQNELRPRLVTELAGNRVTQIACGRQHTLAYVSDLGKVFS 437

Query: 376 FGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKY 435
           FG  + GQLG GG   + +P  +  PS E +  +S +       +   +  +  W   K 
Sbjct: 438 FGSGKEGQLGNGGTHNQLIPLPMKLPSNEELTFESRASEKELIMIAGGNQSILLWMGKKN 497

Query: 436 GQLGLGDVIDRNIPSQVTIEGCVPRNVA 463
             + L     R IP+    EG V R +A
Sbjct: 498 SYVNL----RRKIPT--LNEGTVKRWIA 519



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/238 (26%), Positives = 107/238 (44%), Gaps = 43/238 (18%)

Query: 57  AMAISDSRKLITWGSTDD----LGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
           ++A+S   +L  WG        +G  + +      IP+     +   +V+ +AG AH +A
Sbjct: 268 SLALSKGGELFAWGQNLHGQLGIGSQFASIA----IPQIVENLSGIPLVQISAGKAHSMA 323

Query: 113 VTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGT 172
           ++  G +Y+WG  +       FG L  G    KD        L E +  +     + GG+
Sbjct: 324 LSMSGNIYSWGRND-------FGQLGLGHTDGKDF-----PSLIEALDNQKVEFLACGGS 371

Query: 173 SSG---TDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIAT 225
            +     DG     G+G+ G          Q   +S+  +      P LVT   G R+  
Sbjct: 372 HTALLTKDGLVFTFGAGKHG----------QLGHNSTQNELR----PRLVTELAGNRVTQ 417

Query: 226 VAAGGRHTLA-LSDIGQVWGWGYGGEGQLGL-GSRIRMVSSPHPIPCIESSYGKDRSA 281
           +A G +HTLA +SD+G+V+ +G G EGQLG  G+  +++  P  +P  E    + R++
Sbjct: 418 IACGRQHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEELTFESRAS 475


>gi|159038147|ref|YP_001537400.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
 gi|157916982|gb|ABV98409.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
          Length = 555

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 126/416 (30%), Positives = 175/416 (42%), Gaps = 53/416 (12%)

Query: 63  SRKLITWGSTDDL-GQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYT 121
           S  ++ WG  D+L GQ    +G   + P P  LP   ++   AAG  H +A+T  G V  
Sbjct: 55  SDTVLAWG--DNLFGQLGDGTGADSDTPIPVSLPPGTTVTAIAAGDEHSLALTSTGTVLA 112

Query: 122 WGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGS 181
           WG          FG L        +    +S+ +T  + P + V+  + G S       +
Sbjct: 113 WGRNR-------FGQLG------DETNTSRSTPVTVSLPPGTTVTAIAAGRSHSLAITST 159

Query: 182 GEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQ 241
           G   +  R  S   Q  +    G  N S  P  V L PG  +  +AAG  H+LA++  G 
Sbjct: 160 GSALAWGRNFS--GQLGD----GTTNDSNKPVAVNLPPGTTVTAIAAGDGHSLAVTSAGT 213

Query: 242 VWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNY 301
              WG    GQLG G+              +S+     S A               PG  
Sbjct: 214 ALAWGRNFAGQLGDGT------------TNDSTTPVTVSVA---------------PGTT 246

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V  IA G  HS  IT AG  L +G    GQ G G+T+D  +P  VS   G     VAAG 
Sbjct: 247 VTDIAAGRVHSLAITSAGTALGWGRNGSGQLGDGTTNDSTTPTTVSPPTGTVFTTVAAGE 306

Query: 362 WHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
            H++ ++S G   A G N +GQLG G + +      +  P    +   +++ G  H   +
Sbjct: 307 DHSLAVTSAGTALAAGDNLYGQLGDGTNTSSNTFVTVSLPPSTTI--TAIAVGRFHNLGV 364

Query: 422 ADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAVPPT 477
              G    WG N  GQLG G   +RN P  V +   V   VA G+ H+L LA PPT
Sbjct: 365 TATGAALAWGINIDGQLGDGTTTNRNTPQAVDLP--VSTTVAGGFGHSLALAAPPT 418


>gi|47219890|emb|CAF97160.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 4588

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 86/246 (34%), Positives = 130/246 (52%), Gaps = 35/246 (14%)

Query: 232  HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
            H++AL++ G+V+ WG G  G+LG G+  R          IE+  G+D             
Sbjct: 3777 HSMALTETGEVFSWGDGDFGKLGHGNNERQRRPKQ----IEALQGED------------- 3819

Query: 292  GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                      V  +ACG RHSAV+T  G L TFG G  G+ GQ ST +++ P  V++L G
Sbjct: 3820 ----------VVQLACGFRHSAVVTADGKLFTFGSGESGRLGQRSTSNKMQPERVAALEG 3869

Query: 352  IQIEGVAAGLWHTICISSDG-DVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
              +  V+ GL HT+ +S DG  V+AFG   +G+LG G   A+  P+ ++   L N   K 
Sbjct: 3870 YHVGQVSCGLNHTLVLSLDGMAVWAFGDGDYGKLGAGSSTAKYYPQKVE--QLCNKGMKK 3927

Query: 411  VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVI--DRNIPSQV-TIEGCVPRNVACGWW 467
            V CGA+ + V+A DG V+ +G  +   +GL D +  +R+ P  V ++EG    ++A G  
Sbjct: 3928 VCCGAQFSVVLATDGHVYTFGQERL--IGLPDSMLKNRSNPQVVPSLEGLFIEDIAVGCE 3985

Query: 468  HTLLLA 473
            H L L+
Sbjct: 3986 HVLALS 3991



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 118/238 (49%), Gaps = 38/238 (15%)

Query: 242  VWGWGYGGEGQL-GLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGN 300
            V+ WG G  GQL G G+ + +   P   PC+  +                          
Sbjct: 3683 VYLWGNGRYGQLAGTGTNLTL---PTLAPCLSQT-------------------------- 3713

Query: 301  YVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAG 360
              + + CG   S +I   GA++  G G YG+ GQG++DD   P  +S+  G  +  +   
Sbjct: 3714 --QQVVCGQNCSFLIQSNGAVMAVGEGQYGRLGQGNSDDLFVPTIISAFQGYVVTQLVTS 3771

Query: 361  L---WHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARH 417
                 H++ ++  G+V+++G   FG+LG G ++ +  P+ ++A   E+V    ++CG RH
Sbjct: 3772 CGSDGHSMALTETGEVFSWGDGDFGKLGHGNNERQRRPKQIEALQGEDV--VQLACGFRH 3829

Query: 418  TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLAV 474
            +AV+  DGK+F +G  + G+LG     ++  P +V  +EG     V+CG  HTL+L++
Sbjct: 3830 SAVVTADGKLFTFGSGESGRLGQRSTSNKMQPERVAALEGYHVGQVSCGLNHTLVLSL 3887



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 89/307 (28%), Positives = 135/307 (43%), Gaps = 39/307 (12%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGR---HTLALSDIGQVWGWGYGGEGQLGLGSRI- 259
           GD N  + P  + L P   I  V +      HTLA++  G+V+ WG G  G+LG G+   
Sbjct: 404 GDSNNQSMPKKLVLEPHRNIKKVFSSKGSDGHTLAITVDGEVFSWGDGEYGKLGHGNSAT 463

Query: 260 ----RMVSSP-HPIPCIESSYGKDRSAALSR------------GSVNSEGPGFRVPGNYV 302
               ++V  P      + +S G   SAA++             G +       R     V
Sbjct: 464 QKYPKIVQGPLFSKIVVSASAGYRHSAAVTNDGELYTWGEGDFGRLGHSDSQSRNTPTLV 523

Query: 303 KGI------ACGGRHS-AVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
           K I      ACG  H+ AV  D   + +FG G  G+ G G T+    P  + +L G  I 
Sbjct: 524 KDISGVGQVACGSSHTIAVAQDGRTMWSFGGGDNGKLGHGDTNRVYRPKVIEALHGFIIR 583

Query: 356 GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL-PRLLDAPSLENVHSKSVSCG 414
            V AG   ++ ++S G V+A+G      LG G  +  +L PR ++  S+  +    +SCG
Sbjct: 584 KVCAGSQSSLALTSAGQVFAWGCGSC--LGCGSSETTSLRPRFVEDLSITKI--IDISCG 639

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDV---IDRNIPSQVT-IEGCVPRNVACGWWHTL 470
             H   ++ + +V+ WG N  GQ G G     I R  P +V  +EG   + +  G  H+L
Sbjct: 640 DSHCLALSHENEVYAWGNNTMGQCGQGHTSTPITR--PKKVLGLEGVSIQQITAGTSHSL 697

Query: 471 LLAVPPT 477
                PT
Sbjct: 698 AWTAVPT 704



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 112/430 (26%), Positives = 171/430 (39%), Gaps = 80/430 (18%)

Query: 49   VCGGGCGF-------AMAISDSRK-LITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASI 100
            VCG  C F        MA+ + +   +  G++DDL    + S   G +           +
Sbjct: 3717 VCGQNCSFLIQSNGAVMAVGEGQYGRLGQGNSDDLFVPTIISAFQGYVV--------TQL 3768

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V +     H +A+TE GEV++WG  +       FG L  G    +   ++  +   E V 
Sbjct: 3769 VTSCGSDGHSMALTETGEVFSWGDGD-------FGKLGHGNNERQRRPKQIEALQGEDVV 3821

Query: 161  PRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVT 216
              +   R S   ++  DG+    GSGE G   +R +  K   E  ++ +           
Sbjct: 3822 QLACGFRHSAVVTA--DGKLFTFGSGESGRLGQRSTSNKMQPERVAALE----------- 3868

Query: 217  LNPGVRIATVAAGGRHTLALSDIGQ-VWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSY 275
               G  +  V+ G  HTL LS  G  VW +G G  G+LG GS                 Y
Sbjct: 3869 ---GYHVGQVSCGLNHTLVLSLDGMAVWAFGDGDYGKLGAGSST------------AKYY 3913

Query: 276  GKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG 335
             +      ++G               +K + CG + S V+   G + TFG          
Sbjct: 3914 PQKVEQLCNKG---------------MKKVCCGAQFSVVLATDGHVYTFGQERLIGLPDS 3958

Query: 336  STDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLP 395
               +  +P  V SL G+ IE +A G  H + +SS GD+YA+G N  GQLG G       P
Sbjct: 3959 MLKNRSNPQVVPSLEGLFIEDIAVGCEHVLALSSTGDIYAWGCNSEGQLGLGHCNLVKEP 4018

Query: 396  RLLDAPSLENVHSKSVSCGARH----TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
             L+ A   +N+  K +S G  H    TA         C      G + LG  + +++P Q
Sbjct: 4019 TLITALQGKNI--KQISAGRCHSSAWTAPSTSKNSALCPCQGGPGSVQLG--LPQSVPPQ 4074

Query: 452  V-TIEGCVPR 460
              T++   PR
Sbjct: 4075 YNTLKDLSPR 4084



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 91/175 (52%), Gaps = 7/175 (4%)

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
           + I  G   +  ++  G++   G G YG+ G G ++++  P  +       I+ V +   
Sbjct: 372 QTIEAGQYCTFSVSTDGSVKACGKGSYGRLGLGDSNNQSMPKKLVLEPHRNIKKVFSSKG 431

Query: 363 ---HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
              HT+ I+ DG+V+++G  ++G+LG G    +  P+++  P    +   S S G RH+A
Sbjct: 432 SDGHTLAITVDGEVFSWGDGEYGKLGHGNSATQKYPKIVQGPLFSKI-VVSASAGYRHSA 490

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLA 473
            + +DG+++ WG   +G+LG  D   RN P+ V  I G     VACG  HT+ +A
Sbjct: 491 AVTNDGELYTWGEGDFGRLGHSDSQSRNTPTLVKDISGV--GQVACGSSHTIAVA 543



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 108/240 (45%), Gaps = 40/240 (16%)

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR------IRMVSSPH-PIPCIESSYGK 277
           T+ AG   T ++S  G V   G G  G+LGLG         ++V  PH  I  + SS G 
Sbjct: 373 TIEAGQYCTFSVSTDGSVKACGKGSYGRLGLGDSNNQSMPKKLVLEPHRNIKKVFSSKGS 432

Query: 278 D-RSAALS-RGSVNS-----------------------EGPGFRVPGNYVKGIACGGRHS 312
           D  + A++  G V S                       +GP F      V   + G RHS
Sbjct: 433 DGHTLAITVDGEVFSWGDGEYGKLGHGNSATQKYPKIVQGPLF---SKIVVSASAGYRHS 489

Query: 313 AVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDG- 371
           A +T+ G L T+G G +G+ G   +    +P  V  + G+    VA G  HTI ++ DG 
Sbjct: 490 AAVTNDGELYTWGEGDFGRLGHSDSQSRNTPTLVKDISGVG--QVACGSSHTIAVAQDGR 547

Query: 372 DVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWG 431
            +++FGG   G+LG G       P++++A  L     + V  G++ +  +   G+VF WG
Sbjct: 548 TMWSFGGGDNGKLGHGDTNRVYRPKVIEA--LHGFIIRKVCAGSQSSLALTSAGQVFAWG 605



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 88/323 (27%), Positives = 132/323 (40%), Gaps = 65/323 (20%)

Query: 52  GGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAH 109
           G  G  +AI+   ++ +WG  +   LG     + K+ +I +  PL ++  +V A+AG+ H
Sbjct: 431 GSDGHTLAITVDGEVFSWGDGEYGKLGHGNSATQKYPKIVQG-PLFSKI-VVSASAGYRH 488

Query: 110 CVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSS 169
             AVT  GE+YTWG  +       FG L        D   R +  L + +S   QV+  S
Sbjct: 489 SAAVTNDGELYTWGEGD-------FGRLG-----HSDSQSRNTPTLVKDISGVGQVACGS 536

Query: 170 GGT-SSGTDGR-----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRI 223
             T +   DGR     G G+ G                  GD N    P ++    G  I
Sbjct: 537 SHTIAVAQDGRTMWSFGGGDNGKL--------------GHGDTNRVYRPKVIEALHGFII 582

Query: 224 ATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAAL 283
             V AG + +LAL+  GQV+ WG G    LG GS       P         + +D S   
Sbjct: 583 RKVCAGSQSSLALTSAGQVFAWGCG--SCLGCGSSETTSLRPR--------FVEDLSI-- 630

Query: 284 SRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS- 342
                             +  I+CG  H   ++    +  +G    GQCGQG T   ++ 
Sbjct: 631 ----------------TKIIDISCGDSHCLALSHENEVYAWGNNTMGQCGQGHTSTPITR 674

Query: 343 PNCVSSLLGIQIEGVAAGLWHTI 365
           P  V  L G+ I+ + AG  H++
Sbjct: 675 PKKVLGLEGVSIQQITAGTSHSL 697



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 66/140 (47%), Gaps = 5/140 (3%)

Query: 316 TDAGALLTFGWGLYG--QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDV 373
           TD  A+  + WG     Q  +G+ +  L P         Q   + AG + T  +S+DG V
Sbjct: 333 TDGDAVTVYVWGSNSSHQLAEGTLEKILLPKLTQGFSDAQT--IEAGQYCTFSVSTDGSV 390

Query: 374 YAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR-HTAVIADDGKVFCWGW 432
            A G   +G+LG G    +++P+ L      N+     S G+  HT  I  DG+VF WG 
Sbjct: 391 KACGKGSYGRLGLGDSNNQSMPKKLVLEPHRNIKKVFSSKGSDGHTLAITVDGEVFSWGD 450

Query: 433 NKYGQLGLGDVIDRNIPSQV 452
            +YG+LG G+   +  P  V
Sbjct: 451 GEYGKLGHGNSATQKYPKIV 470



 Score = 47.4 bits (111), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 7/95 (7%)

Query: 364 TICISSDGD---VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
           T C  +DGD   VY +G N   QL  G  +   LP+L    S     ++++  G   T  
Sbjct: 328 TACPGTDGDAVTVYVWGSNSSHQLAEGTLEKILLPKLTQGFS----DAQTIEAGQYCTFS 383

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
           ++ DG V   G   YG+LGLGD  ++++P ++ +E
Sbjct: 384 VSTDGSVKACGKGSYGRLGLGDSNNQSMPKKLVLE 418



 Score = 43.5 bits (101), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 47/83 (56%), Gaps = 7/83 (8%)

Query: 372  DVYAFGGNQFGQL-GTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
            DVY +G  ++GQL GTG +   TLP L  AP L    ++ V CG   + +I  +G V   
Sbjct: 3682 DVYLWGNGRYGQLAGTGTNL--TLPTL--APCLS--QTQQVVCGQNCSFLIQSNGAVMAV 3735

Query: 431  GWNKYGQLGLGDVIDRNIPSQVT 453
            G  +YG+LG G+  D  +P+ ++
Sbjct: 3736 GEGQYGRLGQGNSDDLFVPTIIS 3758


>gi|159039901|ref|YP_001539154.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
 gi|157918736|gb|ABW00164.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
          Length = 556

 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 91/266 (34%), Positives = 122/266 (45%), Gaps = 29/266 (10%)

Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
           S+ P  V L  G  I  V AGG H+LAL+  G V  WG    GQLG G      S+P   
Sbjct: 77  SSTPVDVYLPAGTTITAVTAGGLHSLALTSTGAVLAWGRNFSGQLGNGDTTNR-STP--- 132

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL 328
                              V+ + P     G  +  IA G  HS  +T AG +L +G  L
Sbjct: 133 -------------------VDVDLPA----GTTITAIAAGAFHSLALTSAGTVLAWGENL 169

Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGG 388
           +GQ G G T +  +P  VS   G+ I  VAAG +H++ ++S G V A+G N  GQLG G 
Sbjct: 170 HGQLGNGGTTNMSTPVGVSLPAGVTITAVAAGAFHSLAVTSTGAVLAWGDNSNGQLGNGT 229

Query: 389 DQAETLPRLLDAPSLENV-HSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
               + P  +D P+   +    +   GA H+  +   G    WG N  GQLG GD  +R+
Sbjct: 230 TTGSSTPVDVDLPAGTTITAVAAGVAGAAHSLALTSTGAALAWGNNADGQLGNGDTTNRS 289

Query: 448 IPSQVTI-EGCVPRNVACGWWHTLLL 472
            P  V +  G     VA G  H+L L
Sbjct: 290 TPVDVDLPAGVTITAVAAGGLHSLAL 315



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 98/304 (32%), Positives = 133/304 (43%), Gaps = 31/304 (10%)

Query: 203 SGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM- 261
           +GD    + P  V L  G  I  +AAG  H+LAL+  G V  WG    GQLG G    M 
Sbjct: 123 NGDTTNRSTPVDVDLPAGTTITAIAAGAFHSLALTSAGTVLAWGENLHGQLGNGGTTNMS 182

Query: 262 ----VSSPHPIPCIESSYGKDRSAAL-SRGSV-----NSEG-------PGFRVP------ 298
               VS P  +     + G   S A+ S G+V     NS G        G   P      
Sbjct: 183 TPVGVSLPAGVTITAVAAGAFHSLAVTSTGAVLAWGDNSNGQLGNGTTTGSSTPVDVDLP 242

Query: 299 -GNYVK---GIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQI 354
            G  +        G  HS  +T  GA L +G    GQ G G T +  +P  V    G+ I
Sbjct: 243 AGTTITAVAAGVAGAAHSLALTSTGAALAWGNNADGQLGNGDTTNRSTPVDVDLPAGVTI 302

Query: 355 EGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
             VAAG  H++ +++ G V A+G N  GQLG G     + P  +D P+   ++  +++ G
Sbjct: 303 TAVAAGGLHSLALTAAGAVVAWGRNVSGQLGNGTTTGSSTPVDVDLPTGATIN--AIAAG 360

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACGWWHTLLLA 473
                 +   G V  WG N  GQLG GD I+R+ P  V +  G     VA G  H++ L 
Sbjct: 361 FDFGLALTTAGAVVAWGRNVSGQLGNGDTINRSTPVDVDLPAGVTITAVAAGGQHSMALV 420

Query: 474 VPPT 477
             PT
Sbjct: 421 ALPT 424



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 106/399 (26%), Positives = 157/399 (39%), Gaps = 58/399 (14%)

Query: 55  GFAMAISDSRKLITWGSTDD--LGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
           G + AI  S     WG   D  LG    T       P    LP   +I    AG  H +A
Sbjct: 47  GPSAAIRASDTYFAWGDNSDGQLGNGTTTGS---STPVDVYLPAGTTITAVTAGGLHSLA 103

Query: 113 VTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS-PRSQVSRSSGG 171
           +T  G V  WG      SG++    +T      DV     + +T   +     ++ +S G
Sbjct: 104 LTSTGAVLAWGRNF---SGQLGNGDTTNRSTPVDVDLPAGTTITAIAAGAFHSLALTSAG 160

Query: 172 TSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGR 231
           T         G+ G+                 G  N+S  P  V+L  GV I  VAAG  
Sbjct: 161 TVLAWGENLHGQLGN----------------GGTTNMST-PVGVSLPAGVTITAVAAGAF 203

Query: 232 HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSP----------------------HPIP 269
           H+LA++  G V  WG    GQLG G+     S+P                      H + 
Sbjct: 204 HSLAVTSTGAVLAWGDNSNGQLGNGTTTGS-STPVDVDLPAGTTITAVAAGVAGAAHSLA 262

Query: 270 CIES----SYGKDRSAALSRGSVNSEGPGFRV---PGNYVKGIACGGRHSAVITDAGALL 322
              +    ++G +    L  G   +      V    G  +  +A GG HS  +T AGA++
Sbjct: 263 LTSTGAALAWGNNADGQLGNGDTTNRSTPVDVDLPAGVTITAVAAGGLHSLALTAAGAVV 322

Query: 323 TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFG 382
            +G  + GQ G G+T    +P  V    G  I  +AAG    + +++ G V A+G N  G
Sbjct: 323 AWGRNVSGQLGNGTTTGSSTPVDVDLPTGATINAIAAGFDFGLALTTAGAVVAWGRNVSG 382

Query: 383 QLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
           QLG G     + P  +D P+   V   +V+ G +H+  +
Sbjct: 383 QLGNGDTINRSTPVDVDLPA--GVTITAVAAGGQHSMAL 419



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 92/339 (27%), Positives = 139/339 (41%), Gaps = 53/339 (15%)

Query: 32  SPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGST--DDLGQSYVTSGKHGEIP 89
           +P+ V LP   G+    +  G    ++A++ +  ++ WG      LG    T   +   P
Sbjct: 131 TPVDVDLP--AGTTITAIAAGAF-HSLALTSAGTVLAWGENLHGQLGNGGTT---NMSTP 184

Query: 90  EPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFE 149
               LP   +I   AAG  H +AVT  G V  WG      +G++    +TG+    DV  
Sbjct: 185 VGVSLPAGVTITAVAAGAFHSLAVTSTGAVLAWGDNS---NGQLGNGTTTGSSTPVDVDL 241

Query: 150 RQSSFLTEQVSPRSQVSRSSGGTSSGTD-GRGSGEEGSKRRRISLAKQTAESSSSGDENL 208
              + +T   +  +  + S   TS+G     G+  +G                 +GD   
Sbjct: 242 PAGTTITAVAAGVAGAAHSLALTSTGAALAWGNNADGQL--------------GNGDTTN 287

Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
            + P  V L  GV I  VAAGG H+LAL+  G V  WG    GQLG G+     S+P   
Sbjct: 288 RSTPVDVDLPAGVTITAVAAGGLHSLALTAAGAVVAWGRNVSGQLGNGTTTGS-STP--- 343

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL 328
                              V+ + P     G  +  IA G      +T AGA++ +G  +
Sbjct: 344 -------------------VDVDLP----TGATINAIAAGFDFGLALTTAGAVVAWGRNV 380

Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI 367
            GQ G G T +  +P  V    G+ I  VAAG  H++ +
Sbjct: 381 SGQLGNGDTINRSTPVDVDLPAGVTITAVAAGGQHSMAL 419


>gi|148700104|gb|EDL32051.1| hect domain and RLD 4, isoform CRA_a [Mus musculus]
          Length = 546

 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 82/250 (32%), Positives = 112/250 (44%), Gaps = 30/250 (12%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
            I  VA G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +          
Sbjct: 85  NIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQ------ 138

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDE 340
                               +  +ACG  HS  ++ A  +  +G   YGQ G G     +
Sbjct: 139 --------------------IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQ 178

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
            SP  + SLLGI    VAAG  H+  ++  G ++ +G N+FGQLG   +    +P LL  
Sbjct: 179 TSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK- 237

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVP 459
            SL +     + CG  HTA +  +G VF +G   YGQLG         P +V  + G + 
Sbjct: 238 -SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 460 RNVACGWWHT 469
             VACG  HT
Sbjct: 297 TQVACGRQHT 306



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 104/233 (44%), Gaps = 29/233 (12%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++I  VA G  H+LALS   +V+ WG    GQLGLG   +  +SP  I  +         
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSL--------- 187

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                           +P      +A GG HS V+T +GA+  +G   +GQ G    +D 
Sbjct: 188 --------------LGIP---FMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
             PN + SL   +I  +  G  HT  ++ +G V+ FG   +GQLG      E  PR    
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR--KV 288

Query: 401 PSLENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
             L       V+CG +HT A +   G+++ +G    GQLG G   +R  P  V
Sbjct: 289 FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/176 (34%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  VA G 
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVACGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLG-TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VFCWG NKYGQLGLG    +    Q+  ++ G     VA G  H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   YGQ G G  D+E  L P      +  ++  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQLG   +++   P  + A   +N+   +V+CG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVALDAQNI--VAVACGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 439 GLGDV-----IDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALS 153



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 76/303 (25%), Positives = 123/303 (40%), Gaps = 48/303 (15%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D       S +   +P      ++  IV+ A
Sbjct: 84  QNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++  EV+ WG  +       +G L    GL  D  ++ S  L + +     
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK-------YGQL----GLGIDCQKQTSPQLIKSLLGIPF 192

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           +  ++GG  S          G  R +              DEN    P L+      +I 
Sbjct: 193 MQVAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRSQKIV 245

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +                
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 288

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                     F + G+ V  +ACG +H SA +  +G + +FG G  GQ G GST +  SP
Sbjct: 289 ----------FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 344 NCV 346
             V
Sbjct: 339 FTV 341


>gi|196003320|ref|XP_002111527.1| hypothetical protein TRIADDRAFT_55637 [Trichoplax adhaerens]
 gi|190585426|gb|EDV25494.1| hypothetical protein TRIADDRAFT_55637 [Trichoplax adhaerens]
          Length = 346

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 64/175 (36%), Positives = 102/175 (58%), Gaps = 5/175 (2%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V  ++CG  H+ +++  G + +FG G  GQ G  + D+E +P  + +L G+Q + V  G 
Sbjct: 168 VNLVSCGKEHALILSITGEVFSFGRGSRGQLGHDTLDNEGNPRVIEALQGLQFKLVTCGG 227

Query: 362 WHTICISSDGDVYAFGGNQFGQLGTGGD-QAETLPRLLDAPSL---ENVHSKSVSCGARH 417
           WH+  ISS GD Y++G NQ  QLG   + +A  +   +  P+L   EN + +++S G++H
Sbjct: 228 WHSFAISSSGDAYSWGWNQSYQLGIDSNLEANEVGSCIATPTLIEIENENVQAISGGSKH 287

Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLL 471
           +A I + GKV+ WGW KYGQLG        +P  VT +   +   V CG+WHT++
Sbjct: 288 SACITESGKVYTWGWGKYGQLGHNCYDSVKVPQLVTALSEKLASTVTCGFWHTIV 342



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 66/154 (42%), Gaps = 21/154 (13%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P ++    G++   V  GG H+ A+S  G  + WG+    QLG+ S +            
Sbjct: 209 PRVIEALQGLQFKLVTCGGWHSFAISSSGDAYSWGWNQSYQLGIDSNLE----------- 257

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
                     A   GS  +      +    V+ I+ G +HSA IT++G + T+GWG YGQ
Sbjct: 258 ----------ANEVGSCIATPTLIEIENENVQAISGGSKHSACITESGKVYTWGWGKYGQ 307

Query: 332 CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTI 365
            G    D    P  V++L       V  G WHTI
Sbjct: 308 LGHNCYDSVKVPQLVTALSEKLASTVTCGFWHTI 341



 Score = 43.5 bits (101), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 56/119 (47%), Gaps = 13/119 (10%)

Query: 356 GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGA 415
           G++ G  H + I++D         Q GQ+    D++ +       P+L+      VSCG 
Sbjct: 128 GISCGDLHQLAITTD--------EQVGQV----DKSNSSWCFSLLPTLQTTRVNLVSCGK 175

Query: 416 RHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLA 473
            H  +++  G+VF +G    GQLG   + +   P  +  ++G   + V CG WH+  ++
Sbjct: 176 EHALILSITGEVFSFGRGSRGQLGHDTLDNEGNPRVIEALQGLQFKLVTCGGWHSFAIS 234


>gi|260791114|ref|XP_002590585.1| hypothetical protein BRAFLDRAFT_123620 [Branchiostoma floridae]
 gi|229275780|gb|EEN46596.1| hypothetical protein BRAFLDRAFT_123620 [Branchiostoma floridae]
          Length = 710

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 73/182 (40%), Positives = 101/182 (55%), Gaps = 7/182 (3%)

Query: 295 FRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQI 354
           F +  + +  +ACG  H+A++T+ G L TFG   +GQ G G T     P+CV SL   + 
Sbjct: 30  FWIRNDRICAVACGDEHTALVTENGRLYTFGSNDWGQLGLGHTKTASKPSCVKSLKHEKA 89

Query: 355 EGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAE-TLPRLLDAPSLENVHSKSVSC 413
           + VA G  HT+  + DG VY +GG   GQLG G D  E T P LLD  S     + SVSC
Sbjct: 90  KLVACGRSHTLIATGDGKVYVWGGGSEGQLGLGEDTTECTEPTLLDFDS----KAISVSC 145

Query: 414 GARHTAVIADDGKVFCWGWNKYGQLGLG--DVIDRNIPSQVTIEGCVPRNVACGWWHTLL 471
           G  HTAV+ +DG ++ +G  +YG+LGL   D+   + P +VT      + V CG  HT  
Sbjct: 146 GYYHTAVVTEDGNLYTFGETEYGKLGLNNSDLDSSDTPQKVTGIKEKVKFVVCGGGHTTA 205

Query: 472 LA 473
           +A
Sbjct: 206 IA 207



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/268 (31%), Positives = 122/268 (45%), Gaps = 36/268 (13%)

Query: 213 CLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIE 272
           C+ +L    +   VA G  HTL  +  G+V+ WG G EGQLGLG             C E
Sbjct: 80  CVKSLK-HEKAKLVACGRSHTLIATGDGKVYVWGGGSEGQLGLGEDT--------TECTE 130

Query: 273 SSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQC 332
            +     S A+S                    ++CG  H+AV+T+ G L TFG   YG+ 
Sbjct: 131 PTLLDFDSKAIS--------------------VSCGYYHTAVVTEDGNLYTFGETEYGKL 170

Query: 333 GQGSTDDELSPNCVSSLLGIQ--IEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
           G  ++D + S +    + GI+  ++ V  G  HT  I+  G VY FG    GQLG G   
Sbjct: 171 GLNNSDLD-SSDTPQKVTGIKEKVKFVVCGGGHTTAIAESGAVYTFGNGASGQLGHGNSL 229

Query: 391 AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGD--VIDRNI 448
            E+ P         +   K  SCG   TAVI   G ++ +G  ++G+LGLGD    ++  
Sbjct: 230 LES-PTPHRVERFRDADCKHASCGENFTAVITGKGHLYTFGDGRHGKLGLGDESFTNQFR 288

Query: 449 PSQVTIEGCVPRN-VACGWWHTLLLAVP 475
           P +V          VACG  H +++A P
Sbjct: 289 PFKVARFNKFQVQWVACGGCHMMVIASP 316


>gi|345494033|ref|XP_001605647.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Nasonia
            vitripennis]
          Length = 4752

 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 127/251 (50%), Gaps = 32/251 (12%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            ++   V +GG+H LALS  G V+ WG G +G+LG G+RI                  DR 
Sbjct: 3981 IKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRITY----------------DRP 4024

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
              +             + G  +  IACGG HSA I+ AG L T+G G YG+ G G +DD+
Sbjct: 4025 KLIE-----------ALLGTEIVDIACGGHHSAAISSAGWLYTWGKGRYGRLGHGDSDDQ 4073

Query: 341  LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V++L G ++  VA  +G   T+C++ D +V+++G   +G+LG GG     +P  +
Sbjct: 4074 LKPTVVTALQGYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPMKI 4133

Query: 399  DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGC 457
            +  SL  +    V CG++ +  +   G V+ WG   Y +LG G       P +V+ ++G 
Sbjct: 4134 E--SLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVSALQGK 4191

Query: 458  VPRNVACGWWH 468
               ++A G  H
Sbjct: 4192 KIVSIATGSLH 4202



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 135/279 (48%), Gaps = 32/279 (11%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD-- 278
            ++   V +GG+H LAL+  G+V+ WG G +G+LG G+R+ +   P  I  ++S   +D  
Sbjct: 3009 IKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNRVSL-DKPRLIEALKSKRIRDIA 3067

Query: 279  ----RSAAL-SRGSVNSEGPGFR-------------------VPGNYVKGIACGGR--HS 312
                 SAA+ S G + + G G                     + G  V  +ACG R   +
Sbjct: 3068 CGSGHSAAIASNGELYTWGLGEYGRLGHGDTTTHLKPKLVDALVGQRVIQVACGSRDAQT 3127

Query: 313  AVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGD 372
              +T+ G++ ++G G +G+ G+G +D   SP  V  L G+ +  V  G   ++ ++  G+
Sbjct: 3128 MALTEDGSVYSWGDGDFGKLGRGGSDGCYSPLPVDRLNGLGVVQVECGAQFSLALTKYGE 3187

Query: 373  VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGW 432
            V+ +G   + +LG G D     P L++   L       V+ GA H   + D G+V+ WG 
Sbjct: 3188 VWTWGKGDYFRLGHGNDHHVRRPTLVEG--LRGKKVVHVAVGALHCLAVTDAGQVYAWGD 3245

Query: 433  NKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTL 470
            N +GQ G G  +    PS V  +E      VACG  H++
Sbjct: 3246 NDHGQQGNGSTMVNRKPSLVHNLEDAKVNRVACGSSHSI 3284



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 98/326 (30%), Positives = 141/326 (43%), Gaps = 62/326 (19%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFL-TEQV 159
            V   +G  HC+A++  G VY+WG  +        G L  G  +  D  +   + L TE V
Sbjct: 3984 VAVNSGGKHCLALSSEGHVYSWGEGD-------DGKLGHGNRITYDRPKLIEALLGTEIV 4036

Query: 160  SPRSQVSRSSGGTSSG---TDGRGS-GEEGSKRRRISLAKQTAESSSSGDENLSAFPCLV 215
                    S+  +S+G   T G+G  G  G                  GD +    P +V
Sbjct: 4037 DIACGGHHSAAISSAGWLYTWGKGRYGRLGH-----------------GDSDDQLKPTVV 4079

Query: 216  TLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPC-IE 272
            T   G ++  VA  +G   TL ++D   VW WG G  G+LG G      S    +P  IE
Sbjct: 4080 TALQGYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGG-----SDGCKVPMKIE 4134

Query: 273  SSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQC 332
            S                       + G  V  + CG + S  +T +GA+ T+G G Y + 
Sbjct: 4135 S-----------------------LAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRL 4171

Query: 333  GQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAE 392
            G G+ D    P  VS+L G +I  +A G  H +  S  G+VY +G N  GQLG G   A+
Sbjct: 4172 GHGTDDHVRRPRKVSALQGKKIVSIATGSLHCVACSDKGEVYTWGDNDEGQLGDGTTHAQ 4231

Query: 393  TLPRLLDAPSLENVHSKSVSCGARHT 418
              PRL+ A   +N+    V+CG+ HT
Sbjct: 4232 QSPRLVHALQGKNI--TRVACGSAHT 4255



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 103/380 (27%), Positives = 153/380 (40%), Gaps = 65/380 (17%)

Query: 89   PEPFPLPTEASIVKAA--AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKD 146
            P+P P  ++  I K A  +G  H +A+T+ G+V++WG  E        G L  G  +  D
Sbjct: 2998 PKPIPFLSQYIIKKVAVHSGGKHALALTQDGKVFSWGEGE-------DGKLGHGNRVSLD 3050

Query: 147  VFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGR--GSGEEGSKRRRISLAKQTAESSSSG 204
                  +  ++++   +  S  S   +S  +    G GE G                  G
Sbjct: 3051 KPRLIEALKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRL--------------GHG 3096

Query: 205  DENLSAFPCLVTLNPGVRIATVAAGGR--HTLALSDIGQVWGWGYGGEGQLGLGSRIRMV 262
            D      P LV    G R+  VA G R   T+AL++ G V+ WG G  G+LG G      
Sbjct: 3097 DTTTHLKPKLVDALVGQRVIQVACGSRDAQTMALTEDGSVYSWGDGDFGKLGRG------ 3150

Query: 263  SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL 322
                         G D           S  P  R+ G  V  + CG + S  +T  G + 
Sbjct: 3151 -------------GSD--------GCYSPLPVDRLNGLGVVQVECGAQFSLALTKYGEVW 3189

Query: 323  TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFG 382
            T+G G Y + G G+      P  V  L G ++  VA G  H + ++  G VYA+G N  G
Sbjct: 3190 TWGKGDYFRLGHGNDHHVRRPTLVEGLRGKKVVHVAVGALHCLAVTDAGQVYAWGDNDHG 3249

Query: 383  QLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA--VIADDGKV-------FCWGWN 433
            Q G G       P L+   +LE+     V+CG+ H+   V+ D   +       F    +
Sbjct: 3250 QQGNGSTMVNRKPSLVH--NLEDAKVNRVACGSSHSIAWVLTDQPTLGNQEPVTFPTAKD 3307

Query: 434  KYGQLGLGDVIDRNIPSQVT 453
              GQ  LG   D+   + VT
Sbjct: 3308 PLGQATLGFTQDKTETNVVT 3327



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 104/218 (47%), Gaps = 29/218 (13%)

Query: 226  VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
            +A G +    +S  G+++  G G  G+LGLG     V  P PIP + S Y   + A  S 
Sbjct: 2960 IAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDN-NNVGEPKPIPFL-SQYIIKKVAVHS- 3016

Query: 286  GSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNC 345
                                  GG+H+  +T  G + ++G G  G+ G G+      P  
Sbjct: 3017 ----------------------GGKHALALTQDGKVFSWGEGEDGKLGHGNRVSLDKPRL 3054

Query: 346  VSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLEN 405
            + +L   +I  +A G  H+  I+S+G++Y +G  ++G+LG G       P+L+DA   + 
Sbjct: 3055 IEALKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDTTTHLKPKLVDALVGQR 3114

Query: 406  VHSKSVSCGAR--HTAVIADDGKVFCWGWNKYGQLGLG 441
            V    V+CG+R   T  + +DG V+ WG   +G+LG G
Sbjct: 3115 V--IQVACGSRDAQTMALTEDGSVYSWGDGDFGKLGRG 3150



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 117/238 (49%), Gaps = 36/238 (15%)

Query: 233  TLALSDIGQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNS 290
            TL+    G ++GWG+   GQLG   G+++++     P+PC                S+++
Sbjct: 3887 TLSWDGSGAIYGWGHNHRGQLGGLEGAKVKL-----PLPC---------------ESLSA 3926

Query: 291  EGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLL 350
              P           +A G +    +T  G +   G+G  G+ G G  D  + P  + S+ 
Sbjct: 3927 LRP---------IQLAGGEQTLFAVTADGKVYATGYGALGRLGTGGVDSVMVPTLLESIQ 3977

Query: 351  GIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHS 408
             + I+ VA  +G  H + +SS+G VY++G    G+LG G       P+L++A  L     
Sbjct: 3978 HVFIKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRITYDRPKLIEA--LLGTEI 4035

Query: 409  KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACG 465
              ++CG  H+A I+  G ++ WG  +YG+LG GD  D+  P+ VT ++G    +VACG
Sbjct: 4036 VDIACGGHHSAAISSAGWLYTWGKGRYGRLGHGDSDDQLKPTVVTALQGYKVIDVACG 4093



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 110/245 (44%), Gaps = 33/245 (13%)

Query: 230 GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES------SYGKDRSAAL 283
           G+H LAL+  G V+ WG G  G+LG G        P  I  +        + G   SAA+
Sbjct: 510 GKHYLALTTKGIVYSWGNGDGGRLGHGDSFS-CDEPQVIEVLSDRTVTYIACGSTYSAAI 568

Query: 284 S---------RGSVNSEGPGF----RVP-------GNYVKGIACGG--RHSAVITDAGAL 321
           S         RGS    G G      +P       G+ V  +ACG     +  +T++G +
Sbjct: 569 SSTGELLTWGRGSYGRLGHGICDDISIPTVVTALNGHTVTHVACGSGDSQTLCVTNSGIV 628

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
            ++G G YG+ G+G +D    P  V  LL   +  V  G   +  +++ G+VY +G    
Sbjct: 629 FSWGDGDYGKLGRGGSDGSKLPKIVDKLLDQNVVKVFCGGQFSAALTAHGEVYTWGKGDH 688

Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL--G 439
            +LG G ++    P+L++   L N   + +S G  H   I +D  V+ WG N   Q+   
Sbjct: 689 YRLGHGNEEHVRFPKLVEG--LRNKKVRDLSVGNLHILAITEDQLVYGWGRNDACQIDPS 746

Query: 440 LGDVI 444
           LG V+
Sbjct: 747 LGAVV 751



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 114/242 (47%), Gaps = 31/242 (12%)

Query: 228  AGGRHTL-ALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRG 286
            AGG  TL A++  G+V+  GYG  G+LG G  +  V  P  +  I+  + K       + 
Sbjct: 3933 AGGEQTLFAVTADGKVYATGYGALGRLGTGG-VDSVMVPTLLESIQHVFIK-------KV 3984

Query: 287  SVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCV 346
            +VNS                 GG+H   ++  G + ++G G  G+ G G+      P  +
Sbjct: 3985 AVNS-----------------GGKHCLALSSEGHVYSWGEGDDGKLGHGNRITYDRPKLI 4027

Query: 347  SSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENV 406
             +LLG +I  +A G  H+  ISS G +Y +G  ++G+LG G    +  P ++ A  L+  
Sbjct: 4028 EALLGTEIVDIACGGHHSAAISSAGWLYTWGKGRYGRLGHGDSDDQLKPTVVTA--LQGY 4085

Query: 407  HSKSVSCGA--RHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVA 463
                V+CG+    T  + DD  V+ WG   YG+LG G      +P ++ ++ G     V 
Sbjct: 4086 KVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLGVVKVE 4145

Query: 464  CG 465
            CG
Sbjct: 4146 CG 4147



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 87/164 (53%), Gaps = 5/164 (3%)

Query: 305  IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA--AGLW 362
            IA G +   V++  G L   G G  G+ G G  ++   P  +  L    I+ VA  +G  
Sbjct: 2960 IAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDNNNVGEPKPIPFLSQYIIKKVAVHSGGK 3019

Query: 363  HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIA 422
            H + ++ DG V+++G  + G+LG G   +   PRL++A  L++   + ++CG+ H+A IA
Sbjct: 3020 HALALTQDGKVFSWGEGEDGKLGHGNRVSLDKPRLIEA--LKSKRIRDIACGSGHSAAIA 3077

Query: 423  DDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
             +G+++ WG  +YG+LG GD      P  V  + G     VACG
Sbjct: 3078 SNGELYTWGLGEYGRLGHGDTTTHLKPKLVDALVGQRVIQVACG 3121



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 67/125 (53%), Gaps = 4/125 (3%)

Query: 346  VSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLEN 405
            +S+L  IQ+ G    L+    +++DG VYA G    G+LGTGG  +  +P LL++     
Sbjct: 3924 LSALRPIQLAGGEQTLF---AVTADGKVYATGYGALGRLGTGGVDSVMVPTLLESIQHVF 3980

Query: 406  VHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVAC 464
            +   +V+ G +H   ++ +G V+ WG    G+LG G+ I  + P  +  + G    ++AC
Sbjct: 3981 IKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRITYDRPKLIEALLGTEIVDIAC 4040

Query: 465  GWWHT 469
            G  H+
Sbjct: 4041 GGHHS 4045



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 18/168 (10%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWG---LYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
           VK + C  R   +++ +G +    +G    Y Q   G  DD            +QI    
Sbjct: 460 VKQLCCTERALLILSLSGKVYMMYYGSETQYPQSVYGFADDV-----------VQIASHP 508

Query: 359 AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
            G  H + +++ G VY++G    G+LG G   +   P++++  S   V    ++CG+ ++
Sbjct: 509 DG-KHYLALTTKGIVYSWGNGDGGRLGHGDSFSCDEPQVIEVLSDRTV--TYIACGSTYS 565

Query: 419 AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACG 465
           A I+  G++  WG   YG+LG G   D +IP+ VT + G    +VACG
Sbjct: 566 AAISSTGELLTWGRGSYGRLGHGICDDISIPTVVTALNGHTVTHVACG 613



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 4/129 (3%)

Query: 346  VSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLEN 405
            +S L  I I G +  L+    +S +G +YA G    G+LG G +     P+ +   S   
Sbjct: 2952 LSKLKPIHIAGGSKTLF---VVSQEGKLYACGEGTNGRLGLGDNNNVGEPKPIPFLSQYI 3008

Query: 406  VHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVAC 464
            +   +V  G +H   +  DGKVF WG  + G+LG G+ +  + P  +  ++    R++AC
Sbjct: 3009 IKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNRVSLDKPRLIEALKSKRIRDIAC 3068

Query: 465  GWWHTLLLA 473
            G  H+  +A
Sbjct: 3069 GSGHSAAIA 3077



 Score = 42.0 bits (97), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 5/73 (6%)

Query: 53   GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
            G  F++A++ S  + TWG  D   LG     +  H   P          IV  A G  HC
Sbjct: 4147 GSQFSVALTRSGAVYTWGKGDYHRLGHG---TDDHVRRPRKVSALQGKKIVSIATGSLHC 4203

Query: 111  VAVTEGGEVYTWG 123
            VA ++ GEVYTWG
Sbjct: 4204 VACSDKGEVYTWG 4216


>gi|32451488|ref|NP_080377.2| probable E3 ubiquitin-protein ligase HERC4 isoform 2 [Mus musculus]
 gi|29144941|gb|AAH43082.1| Hect domain and RLD 4 [Mus musculus]
 gi|74188723|dbj|BAE28095.1| unnamed protein product [Mus musculus]
 gi|148700106|gb|EDL32053.1| hect domain and RLD 4, isoform CRA_c [Mus musculus]
          Length = 1049

 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 82/249 (32%), Positives = 112/249 (44%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  VA G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +           
Sbjct: 86  IVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQ------- 138

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDEL 341
                              +  +ACG  HS  ++ A  +  +G   YGQ G G     + 
Sbjct: 139 -------------------IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQT 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  + SLLGI    VAAG  H+  ++  G ++ +G N+FGQLG   +    +P LL   
Sbjct: 180 SPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK-- 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL +     + CG  HTA +  +G VF +G   YGQLG         P +V  + G +  
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297

Query: 461 NVACGWWHT 469
            VACG  HT
Sbjct: 298 QVACGRQHT 306



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 77/235 (32%), Positives = 108/235 (45%), Gaps = 33/235 (14%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++I  VA G  H+LALS   +V+ WG    GQLGLG   +  +SP     I+S  G    
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQ---LIKSLLG---- 189

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTD 338
                           +P      +A GG HS V+T +GA+  FGWG   +GQ G    +
Sbjct: 190 ----------------IP---FMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDEN 228

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D   PN + SL   +I  +  G  HT  ++ +G V+ FG   +GQLG      E  PR  
Sbjct: 229 DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR-- 286

Query: 399 DAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
               L       V+CG +HT A +   G+++ +G    GQLG G   +R  P  V
Sbjct: 287 KVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/176 (34%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  VA G 
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVACGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLG-TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VFCWG NKYGQLGLG    +    Q+  ++ G     VA G  H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   YGQ G G  D+E  L P      +  ++  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +V+CG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVACGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 439 GLG-----DVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALS 153



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 76/304 (25%), Positives = 123/304 (40%), Gaps = 48/304 (15%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D       S +   +P      ++  IV+ A
Sbjct: 84  QNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++  EV+ WG  +       +G L    GL  D  ++ S  L + +     
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK-------YGQL----GLGIDCQKQTSPQLIKSLLGIPF 192

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           +  ++GG  S          G  R +              DEN    P L+      +I 
Sbjct: 193 MQVAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRSQKIV 245

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +                
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 288

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                     F + G+ V  +ACG +H SA +  +G + +FG G  GQ G GST +  SP
Sbjct: 289 ----------FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 344 NCVS 347
             V 
Sbjct: 339 FTVK 342


>gi|74226109|dbj|BAE25272.1| unnamed protein product [Mus musculus]
          Length = 1057

 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 82/249 (32%), Positives = 112/249 (44%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  VA G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +           
Sbjct: 86  IVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQ------- 138

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDEL 341
                              +  +ACG  HS  ++ A  +  +G   YGQ G G     + 
Sbjct: 139 -------------------IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQT 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  + SLLGI    VAAG  H+  ++  G ++ +G N+FGQLG   +    +P LL   
Sbjct: 180 SPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLL--K 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL +     + CG  HTA +  +G VF +G   YGQLG         P +V  + G +  
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297

Query: 461 NVACGWWHT 469
            VACG  HT
Sbjct: 298 QVACGRQHT 306



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 77/235 (32%), Positives = 108/235 (45%), Gaps = 33/235 (14%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++I  VA G  H+LALS   +V+ WG    GQLGLG   +  +SP     I+S  G    
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQ---LIKSLLG---- 189

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTD 338
                           +P      +A GG HS V+T +GA+  FGWG   +GQ G    +
Sbjct: 190 ----------------IP---FMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDEN 228

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D   PN + SL   +I  +  G  HT  ++ +G V+ FG   +GQLG      E  PR  
Sbjct: 229 DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR-- 286

Query: 399 DAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
               L       V+CG +HT A +   G+++ +G    GQLG G   +R  P  V
Sbjct: 287 KVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/176 (34%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  VA G 
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVACGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLG-TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VFCWG NKYGQLGLG    +    Q+  ++ G     VA G  H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   YGQ G G  D+E  L P      +  ++  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +V+CG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVACGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 439 GLGDV-----IDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALS 153



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 76/304 (25%), Positives = 123/304 (40%), Gaps = 48/304 (15%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D       S +   +P      ++  IV+ A
Sbjct: 84  QNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++  EV+ WG  +       +G L    GL  D  ++ S  L + +     
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK-------YGQL----GLGIDCQKQTSPQLIKSLLGIPF 192

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           +  ++GG  S          G  R +              DEN    P L+      +I 
Sbjct: 193 MQVAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRSQKIV 245

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +                
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 288

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                     F + G+ V  +ACG +H SA +  +G + +FG G  GQ G GST +  SP
Sbjct: 289 ----------FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 344 NCVS 347
             V 
Sbjct: 339 FTVK 342


>gi|148700108|gb|EDL32055.1| hect domain and RLD 4, isoform CRA_e [Mus musculus]
          Length = 928

 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 82/249 (32%), Positives = 112/249 (44%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  VA G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +           
Sbjct: 86  IVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQ------- 138

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDEL 341
                              +  +ACG  HS  ++ A  +  +G   YGQ G G     + 
Sbjct: 139 -------------------IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQT 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  + SLLGI    VAAG  H+  ++  G ++ +G N+FGQLG   +    +P LL   
Sbjct: 180 SPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLL--K 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL +     + CG  HTA +  +G VF +G   YGQLG         P +V  + G +  
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297

Query: 461 NVACGWWHT 469
            VACG  HT
Sbjct: 298 QVACGRQHT 306



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 75/235 (31%), Positives = 106/235 (45%), Gaps = 33/235 (14%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++I  VA G  H+LALS   +V+ WG    GQLGLG   +  +SP  I  +         
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSL--------- 187

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTD 338
                           +P      +A GG HS V+T +GA+  FGWG   +GQ G    +
Sbjct: 188 --------------LGIP---FMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDEN 228

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D   PN + SL   +I  +  G  HT  ++ +G V+ FG   +GQLG      E  PR  
Sbjct: 229 DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR-- 286

Query: 399 DAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
               L       V+CG +HT A +   G+++ +G    GQLG G   +R  P  V
Sbjct: 287 KVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/176 (34%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  VA G 
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVACGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLG-TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VFCWG NKYGQLGLG    +    Q+  ++ G     VA G  H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   YGQ G G  D+E  L P      +  ++  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +V+CG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVACGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 439 GLGDV-----IDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALS 153



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 76/304 (25%), Positives = 123/304 (40%), Gaps = 48/304 (15%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D       S +   +P      ++  IV+ A
Sbjct: 84  QNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++  EV+ WG  +       +G L    GL  D  ++ S  L + +     
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK-------YGQL----GLGIDCQKQTSPQLIKSLLGIPF 192

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           +  ++GG  S          G  R +              DEN    P L+      +I 
Sbjct: 193 MQVAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRSQKIV 245

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +                
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 288

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                     F + G+ V  +ACG +H SA +  +G + +FG G  GQ G GST +  SP
Sbjct: 289 ----------FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 344 NCVS 347
             V 
Sbjct: 339 FTVK 342


>gi|312433980|ref|NP_084390.1| probable E3 ubiquitin-protein ligase HERC4 isoform 1 [Mus musculus]
 gi|126215720|sp|Q6PAV2.2|HERC4_MOUSE RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           4
          Length = 1057

 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 82/249 (32%), Positives = 112/249 (44%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  VA G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +           
Sbjct: 86  IVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQ------- 138

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDEL 341
                              +  +ACG  HS  ++ A  +  +G   YGQ G G     + 
Sbjct: 139 -------------------IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQT 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  + SLLGI    VAAG  H+  ++  G ++ +G N+FGQLG   +    +P LL   
Sbjct: 180 SPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLL--K 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL +     + CG  HTA +  +G VF +G   YGQLG         P +V  + G +  
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297

Query: 461 NVACGWWHT 469
            VACG  HT
Sbjct: 298 QVACGRQHT 306



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/235 (32%), Positives = 108/235 (45%), Gaps = 33/235 (14%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++I  VA G  H+LALS   +V+ WG    GQLGLG   +  +SP     I+S  G    
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQ---LIKSLLG---- 189

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTD 338
                           +P      +A GG HS V+T +GA+  FGWG   +GQ G    +
Sbjct: 190 ----------------IP---FMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDEN 228

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D   PN + SL   +I  +  G  HT  ++ +G V+ FG   +GQLG      E  PR  
Sbjct: 229 DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR-- 286

Query: 399 DAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
               L       V+CG +HT A +   G+++ +G    GQLG G   +R  P  V
Sbjct: 287 KVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/176 (34%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  VA G 
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVACGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLG-TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VFCWG NKYGQLGLG    +    Q+  ++ G     VA G  H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   YGQ G G  D+E  L P      +  ++  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +V+CG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVACGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 439 GLGDV-----IDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALS 153



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 76/304 (25%), Positives = 123/304 (40%), Gaps = 48/304 (15%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D       S +   +P      ++  IV+ A
Sbjct: 84  QNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++  EV+ WG  +       +G L    GL  D  ++ S  L + +     
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK-------YGQL----GLGIDCQKQTSPQLIKSLLGIPF 192

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           +  ++GG  S          G  R +              DEN    P L+      +I 
Sbjct: 193 MQVAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRSQKIV 245

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +                
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 288

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                     F + G+ V  +ACG +H SA +  +G + +FG G  GQ G GST +  SP
Sbjct: 289 ----------FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 344 NCVS 347
             V 
Sbjct: 339 FTVK 342


>gi|428171675|gb|EKX40590.1| hypothetical protein GUITHDRAFT_75473, partial [Guillardia theta
           CCMP2712]
          Length = 413

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 92/312 (29%), Positives = 146/312 (46%), Gaps = 35/312 (11%)

Query: 193 LAKQTAE-SSSSGDENLSAFPCLVTLNPGVRIATVAA--GGRHTLALSDIGQVWGWGYGG 249
           LA++T + S++   E  S    +  L P  ++  V+   G  H L ++  GQV+  G   
Sbjct: 105 LARETHQGSANRSKEYSSDIELMEGLPPDCKVVQVSCFNGAEHVLVVTSAGQVYSCGCNN 164

Query: 250 EGQLGLGS-----RIRMVSSPHPIPCIESSYGKDRSAALSR-GSVNSEG----------- 292
            GQLGLGS      + +V S   +  + +S     S  +S  GS  S G           
Sbjct: 165 HGQLGLGSTKMSPSLLLVESLKHVRVLSASCSYHHSVVVSSDGSAFSFGLNDCGQLGIGT 224

Query: 293 -PGFRVPG-------NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN 344
            P   +P        + V+  ACG  H+  +T+ G + + G  L GQ G GS      P 
Sbjct: 225 RPNQLLPHRVELPSPHLVRLAACGQYHTIFLTEEGMVFSCGKNLNGQLGLGSRSSTNVPT 284

Query: 345 CVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLE 404
            +++L       +A G  HT  +  DG ++ FG N  GQLG G   + + P  +   +L 
Sbjct: 285 LIAALQERPASMIACGYSHTCVVLEDGKLFTFGYNHQGQLGLGHTDSVSSP--MQVETLR 342

Query: 405 NVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRN--- 461
           NV    +SCG   T V+++ G+++ +G N +GQLGLGD  DR +P  V +     +N   
Sbjct: 343 NVKVVKISCGTHFTCVLSESGELWSFGCNCHGQLGLGDSTDRLVP--VLVPSMTKKNLSE 400

Query: 462 VACGWWHTLLLA 473
           +ACG+ H + ++
Sbjct: 401 IACGFHHLVAIS 412



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 119/255 (46%), Gaps = 25/255 (9%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK-DRS 280
           RI  VAAG   +  L++ G+V+  G    GQL                  E+  G  +RS
Sbjct: 74  RIVKVAAGSETSYFLTEEGKVYCCGLNSTGQLAR----------------ETHQGSANRS 117

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIAC--GGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
              S      EG     P   V  ++C  G  H  V+T AG + + G   +GQ G GST 
Sbjct: 118 KEYSSDIELMEGLP---PDCKVVQVSCFNGAEHVLVVTSAGQVYSCGCNNHGQLGLGSTK 174

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
              S   V SL  +++   +    H++ +SSDG  ++FG N  GQLG G    + LP  +
Sbjct: 175 MSPSLLLVESLKHVRVLSASCSYHHSVVVSSDGSAFSFGLNDCGQLGIGTRPNQLLPHRV 234

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCV 458
           + PS   V  +  +CG  HT  + ++G VF  G N  GQLGLG     N+P+ +      
Sbjct: 235 ELPSPHLV--RLAACGQYHTIFLTEEGMVFSCGKNLNGQLGLGSRSSTNVPTLIAALQER 292

Query: 459 PRN-VACGWWHTLLL 472
           P + +ACG+ HT ++
Sbjct: 293 PASMIACGYSHTCVV 307



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 93/337 (27%), Positives = 139/337 (41%), Gaps = 50/337 (14%)

Query: 87  EIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRV-FGDLSTGTGLDK 145
           E+ E  P   +   V    G  H + VT  G+VY+ G   C   G++  G       L  
Sbjct: 125 ELMEGLPPDCKVVQVSCFNGAEHVLVVTSAGQVYSCG---CNNHGQLGLGSTKMSPSLLL 181

Query: 146 DVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGD 205
               +    L+   S    V  SS G++        G+ G   R   L     E  S   
Sbjct: 182 VESLKHVRVLSASCSYHHSVVVSSDGSAFSFGLNDCGQLGIGTRPNQLLPHRVELPS--- 238

Query: 206 ENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSP 265
                 P LV L         A G  HT+ L++ G V+  G    GQLGLGSR     S 
Sbjct: 239 ------PHLVRL--------AACGQYHTIFLTEEGMVFSCGKNLNGQLGLGSR-----SS 279

Query: 266 HPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFG 325
             +P + ++  ++R A++                     IACG  H+ V+ + G L TFG
Sbjct: 280 TNVPTLIAAL-QERPASM---------------------IACGYSHTCVVLEDGKLFTFG 317

Query: 326 WGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLG 385
           +   GQ G G TD   SP  V +L  +++  ++ G   T  +S  G++++FG N  GQLG
Sbjct: 318 YNHQGQLGLGHTDSVSSPMQVETLRNVKVVKISCGTHFTCVLSESGELWSFGCNCHGQLG 377

Query: 386 TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIA 422
            G      +P L+  PS+   +   ++CG  H   I+
Sbjct: 378 LGDSTDRLVPVLV--PSMTKKNLSEIACGFHHLVAIS 412



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 14/161 (8%)

Query: 325 GWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQL 384
           G    G+ G  +  +++  + V SL   +I  VAAG   +  ++ +G VY  G N  GQL
Sbjct: 46  GQNRKGELGHSTFREQVEMSLVQSLRRKRIVKVAAGSETSYFLTEEGKVYCCGLNSTGQL 105

Query: 385 GTGGDQAETLPRLLDAPSLE-------NVHSKSVSC--GARHTAVIADDGKVFCWGWNKY 435
                Q         +  +E       +     VSC  GA H  V+   G+V+  G N +
Sbjct: 106 ARETHQGSANRSKEYSSDIELMEGLPPDCKVVQVSCFNGAEHVLVVTSAGQVYSCGCNNH 165

Query: 436 GQLGLGDVIDRNIPSQVTIEGCVPRNV---ACGWWHTLLLA 473
           GQLGLG    +  PS + +E      V   +C + H+++++
Sbjct: 166 GQLGLGST--KMSPSLLLVESLKHVRVLSASCSYHHSVVVS 204


>gi|148700105|gb|EDL32052.1| hect domain and RLD 4, isoform CRA_b [Mus musculus]
          Length = 1066

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 82/249 (32%), Positives = 112/249 (44%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  VA G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +           
Sbjct: 95  IVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQ------- 147

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDEL 341
                              +  +ACG  HS  ++ A  +  +G   YGQ G G     + 
Sbjct: 148 -------------------IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQT 188

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  + SLLGI    VAAG  H+  ++  G ++ +G N+FGQLG   +    +P LL   
Sbjct: 189 SPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK-- 246

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL +     + CG  HTA +  +G VF +G   YGQLG         P +V  + G +  
Sbjct: 247 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 306

Query: 461 NVACGWWHT 469
            VACG  HT
Sbjct: 307 QVACGRQHT 315



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/235 (32%), Positives = 108/235 (45%), Gaps = 33/235 (14%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++I  VA G  H+LALS   +V+ WG    GQLGLG   +  +SP     I+S  G    
Sbjct: 146 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQ---LIKSLLG---- 198

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTD 338
                           +P      +A GG HS V+T +GA+  FGWG   +GQ G    +
Sbjct: 199 ----------------IP---FMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDEN 237

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D   PN + SL   +I  +  G  HT  ++ +G V+ FG   +GQLG      E  PR  
Sbjct: 238 DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR-- 295

Query: 399 DAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
               L       V+CG +HT A +   G+++ +G    GQLG G   +R  P  V
Sbjct: 296 KVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 350



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/176 (34%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  VA G 
Sbjct: 45  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVACGE 102

Query: 362 WHTICISSDGDVYAFGGNQFGQLG-TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 103 AHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLA 160

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VFCWG NKYGQLGLG    +    Q+  ++ G     VA G  H+ +L +
Sbjct: 161 LSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL 216



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 56/161 (34%), Positives = 83/161 (51%), Gaps = 14/161 (8%)

Query: 320 ALLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
           ++L +G   YGQ G G  D+E  L P      +  ++  V  GL HT+ +  DG VY  G
Sbjct: 9   SMLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG 68

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQ 437
            N  GQL  G +++   P  + A   +N+   +V+CG  HT  + D G+V+ WG +  GQ
Sbjct: 69  CNDLGQL--GHEKSRKKPEQVVALDAQNI--VAVACGEAHTLALNDKGQVYAWGLDSDGQ 124

Query: 438 LGLGDV-----IDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           LGL        + RNI S   I+      VACG++H+L L+
Sbjct: 125 LGLQGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALS 162



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 76/304 (25%), Positives = 123/304 (40%), Gaps = 48/304 (15%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D       S +   +P      ++  IV+ A
Sbjct: 93  QNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVA 152

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++  EV+ WG  +       +G L    GL  D  ++ S  L + +     
Sbjct: 153 CGYYHSLALSKASEVFCWGQNK-------YGQL----GLGIDCQKQTSPQLIKSLLGIPF 201

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           +  ++GG  S          G  R +              DEN    P L+      +I 
Sbjct: 202 MQVAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRSQKIV 254

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +                
Sbjct: 255 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 297

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                     F + G+ V  +ACG +H SA +  +G + +FG G  GQ G GST +  SP
Sbjct: 298 ----------FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 347

Query: 344 NCVS 347
             V 
Sbjct: 348 FTVK 351



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 51/112 (45%), Gaps = 6/112 (5%)

Query: 362 WHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
           W T  I S   +  +G   +GQLG GG   E +     +    N   + V CG RHT  +
Sbjct: 2   WKTKVIPS---MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFV 58

Query: 422 ADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
            DDG V+  G N  GQLG      R  P QV  ++      VACG  HTL L
Sbjct: 59  LDDGTVYTCGCNDLGQLGHEK--SRKKPEQVVALDAQNIVAVACGEAHTLAL 108


>gi|442317911|ref|YP_007357932.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441485553|gb|AGC42248.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 1451

 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 124/444 (27%), Positives = 198/444 (44%), Gaps = 63/444 (14%)

Query: 57   AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEG 116
            +M +     + TWG+    G   +  G  G+   P  +   A I     G AH + V++ 
Sbjct: 861  SMVLRADGTVWTWGAN---GSGQLGDGTLGDRASPLEVKGLAGIATGVMGEAHALVVSQD 917

Query: 117  GEVYTWGWKECVPSGR-VFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSG 175
            G V+ WG      +GR   GD +T +          S+ +   V     ++    GT   
Sbjct: 918  GTVWAWG-----ANGRGQLGDGTTTSSASPVRVAGLSAAMNVSVGQAYSLAVLPDGTVWS 972

Query: 176  TDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLA 235
                 SG+ G            A ++    ++L+             +  V AG  H +A
Sbjct: 973  WGANDSGQLGD-------GTNVARTTPKPVQDLA------------DVKAVTAGAHHVVA 1013

Query: 236  LSDIGQVWGWGYGGEGQLGLGS---RIRMVSSPHPIPCIESSYGKDRSAAL-------SR 285
            +   G VWGWG    GQ+G G+   R R V     +  +E+S G+  S AL       S 
Sbjct: 1014 VRHDGTVWGWGANAFGQVGDGTHFWRFRPVRVEGLLNAVETSAGEQHSLALLGDERALSW 1073

Query: 286  GSVN-------SEGP-----GFRVPGNYV----KGIACGGRHSAVITDAGALLTFGWGLY 329
            GS           GP     G ++P + V      ++   +H+A +   G + T+G    
Sbjct: 1074 GSHEYGQLGDAESGPSLEPVGVKLPSSKVLVPAVSVSAWHQHAAALLADGTVQTWGGNAD 1133

Query: 330  GQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD 389
            GQ G G+T+   +P  V+ L G  +  VA    HT+ + SDG V+A+G N FGQLG G +
Sbjct: 1134 GQLGDGTTESRATPITVAGL-GAMVA-VAPAARHTLALRSDGTVWAWGDNTFGQLGDGSN 1191

Query: 390  QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIP 449
               TLP  +    LE V   +++ G+ H+  + +DG V+ WG+N +GQLG G +  R +P
Sbjct: 1192 TRRTLP--VQVVGLEKV--TAIAAGSYHSLAVREDGTVWAWGYNVFGQLGDGTMDARAVP 1247

Query: 450  SQVT-IEGCVPRNVACGWWHTLLL 472
            +++  ++G V   VA G +H+L+L
Sbjct: 1248 TRMLGLDGAVA--VAGGEYHSLML 1269



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 139/499 (27%), Positives = 196/499 (39%), Gaps = 120/499 (24%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
           G   ++A+   R + TWG  ++ GQ  V  G + + P P  +P  + +V  AAG  H +A
Sbjct: 107 GDAHSLALRADRTVWTWGG-NNAGQ--VGDGTNVDRPTPQKVPGLSDVVAVAAGEFHSLA 163

Query: 113 VTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGT 172
           +   G V+ WG          +G L  G          Q   LT  V+  +    S    
Sbjct: 164 LRADGTVWAWG-------SNFYGQLGRGHS-QPGPSPAQVVGLTGVVALAAGFDFSLAVR 215

Query: 173 SSGT------DGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATV 226
           S GT      +G G   +G+  +R++                   P  V+   GV  + V
Sbjct: 216 SDGTVWAWGANGSGQLGDGTYIQRLA-------------------PTQVSQLQGV--SAV 254

Query: 227 AAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA---- 282
            AG  H LAL   G VW WG    GQ+G G+       P P+     +  K  +A     
Sbjct: 255 TAGLYHALALRSDGTVWAWGSNSSGQMGDGT---WTDRPSPVQVTSIARAKAVAAQDAGS 311

Query: 283 ---LSRGSV-----NSEGP-----------GFRVPG-NYVKGIACGGRHSAVITDAGALL 322
              L  G V     NS+G              RV G   V  +A G +H+ V+   G L 
Sbjct: 312 LVLLDDGGVFAWGLNSQGQLGIGTTADSPLPVRVRGLGAVTSLAAGTQHAVVLRADGTLW 371

Query: 323 TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFG 382
           T+G G  GQ G GS++  LSP  V+ L    +  VA+G +H++   SDG V+ +G N  G
Sbjct: 372 TWGHGATGQLGHGSSERMLSPEVVTRL--SNVASVASGSFHSVAALSDGSVWTWGRNTNG 429

Query: 383 QLGTGGDQAETLPRLLDAPSLENV--------HS-------------------------- 408
           QLG G      LP  +  P L  V        HS                          
Sbjct: 430 QLGDGTTTERHLP--VRVPGLSGVVSVSASGHHSFALRSDGTVWGWGRNAQGQMGDGTTK 487

Query: 409 --------------KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT- 453
                         K+++ G  H   +  DG V+ WG+N  GQLG G   DR  P QVT 
Sbjct: 488 DRASPARVEGLSSVKALASGGSHMVALRTDGTVWTWGYNGAGQLGDGTTTDRRAPVQVTG 547

Query: 454 IEGCVPRNVACGWWHTLLL 472
           + G    +VA G + +L L
Sbjct: 548 LSGVT--SVAAGAYFSLAL 564



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 116/377 (30%), Positives = 157/377 (41%), Gaps = 70/377 (18%)

Query: 102 KAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSP 161
           K AAG  H + VT+ G V+ WG       G   G L TG+      F+R    + +QV  
Sbjct: 52  KVAAGAQHSLYVTQAGTVWAWG-------GNGSGQLGTGS----VSFQR---VVAQQVPG 97

Query: 162 RSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGV 221
            + V+  + G +     R      + R   +     A     G       P  V   PG+
Sbjct: 98  LTDVTSIAAGDAHSLALR------ADRTVWTWGGNNAGQVGDGTNVDRPTPQKV---PGL 148

Query: 222 R-IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
             +  VAAG  H+LAL   G VW WG    GQLG G      S P P P           
Sbjct: 149 SDVVAVAAGEFHSLALRADGTVWAWGSNFYGQLGRGH-----SQPGPSPA---------- 193

Query: 281 AALSRGSVNSEGPGFRVPG-NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDD 339
                          +V G   V  +A G   S  +   G +  +G    GQ G G+   
Sbjct: 194 ---------------QVVGLTGVVALAAGFDFSLAVRSDGTVWAWGANGSGQLGDGTYIQ 238

Query: 340 ELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLD 399
            L+P  VS L G  +  V AGL+H + + SDG V+A+G N  GQ+G G           D
Sbjct: 239 RLAPTQVSQLQG--VSAVTAGLYHALALRSDGTVWAWGSNSSGQMGDG--------TWTD 288

Query: 400 APSLENVHS----KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
            PS   V S    K+V+     + V+ DDG VF WG N  GQLG+G   D  +P +V   
Sbjct: 289 RPSPVQVTSIARAKAVAAQDAGSLVLLDDGGVFAWGLNSQGQLGIGTTADSPLPVRVRGL 348

Query: 456 GCVPRNVACGWWHTLLL 472
           G V  ++A G  H ++L
Sbjct: 349 GAVT-SLAAGTQHAVVL 364



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 111/422 (26%), Positives = 170/422 (40%), Gaps = 53/422 (12%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
           G  F++A+     +  WG+    G   +  G + +   P  +     +    AG  H +A
Sbjct: 207 GFDFSLAVRSDGTVWAWGAN---GSGQLGDGTYIQRLAPTQVSQLQGVSAVTAGLYHALA 263

Query: 113 VTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGT 172
           +   G V+ WG           G +  GT  D     R S      ++    V+    G+
Sbjct: 264 LRSDGTVWAWGSNSS-------GQMGDGTWTD-----RPSPVQVTSIARAKAVAAQDAGS 311

Query: 173 SSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRH 232
               D  G    G   +       TA+S           P  V +     + ++AAG +H
Sbjct: 312 LVLLDDGGVFAWGLNSQGQLGIGTTADS-----------PLPVRVRGLGAVTSLAAGTQH 360

Query: 233 TLALSDIGQVWGWGYGGEGQLGLGSRIRMVS----------------SPHPIPCIES--- 273
            + L   G +W WG+G  GQLG GS  RM+S                S H +  +     
Sbjct: 361 AVVLRADGTLWTWGHGATGQLGHGSSERMLSPEVVTRLSNVASVASGSFHSVAALSDGSV 420

Query: 274 -SYGKDRSAALSRGSVNSEGPGFRVPG-NYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
            ++G++ +  L  G+        RVPG + V  ++  G HS  +   G +  +G    GQ
Sbjct: 421 WTWGRNTNGQLGDGTTTERHLPVRVPGLSGVVSVSASGHHSFALRSDGTVWGWGRNAQGQ 480

Query: 332 CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
            G G+T D  SP  V  L    ++ +A+G  H + + +DG V+ +G N  GQLG G    
Sbjct: 481 MGDGTTKDRASPARVEGL--SSVKALASGGSHMVALRTDGTVWTWGYNGAGQLGDGTTTD 538

Query: 392 ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
              P  +    L  V   SV+ GA  +  +  DG V+ WG    GQLG G  + R  P Q
Sbjct: 539 RRAP--VQVTGLSGV--TSVAAGAYFSLALRTDGTVWAWGDGFEGQLGDGAGVQRASPVQ 594

Query: 452 VT 453
           VT
Sbjct: 595 VT 596



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 118/403 (29%), Positives = 160/403 (39%), Gaps = 65/403 (16%)

Query: 52  GGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFP--LPTEASIVKAAAGWAH 109
           GG   +MA++    L  WG     G +Y   G  G  P      +P  + I    A + H
Sbjct: 656 GGLYHSMALAQDGTLRAWG-----GNAYGQFGDGGVTPRVVAGAVPGLSGIKLLGASYLH 710

Query: 110 CVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSS 169
            +AV E G + TWG+         FG L  G            S L  QV    Q  R S
Sbjct: 711 VLAVREDGMLLTWGYNR-------FGQLGLGAA--------GWSSLPVQVRGLGQGRRLS 755

Query: 170 GGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAG 229
            G +     R  G        ++  + T+     G     A P L    P  R A+  AG
Sbjct: 756 AGRAHSLLVRADGTV------LAWGQNTSGQLGDGSTTHRASPVLARNLPCARAAS--AG 807

Query: 230 GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVN 289
            +H+L L+  G VW WG   +GQLG G    + S  +P   +E  +G             
Sbjct: 808 RQHSLVLACDGTVWSWGGNSQGQLGDGG---VTSRAYPAK-VEGLWG------------- 850

Query: 290 SEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSL 349
                       V  +  GG  S V+   G + T+G    GQ G G+  D  SP  V  L
Sbjct: 851 ------------VVAVLAGGDSSMVLRADGTVWTWGANGSGQLGDGTLGDRASPLEVKGL 898

Query: 350 LGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSK 409
            GI   GV  G  H + +S DG V+A+G N  GQLG G   +   P  +   S     + 
Sbjct: 899 AGIAT-GVM-GEAHALVVSQDGTVWAWGANGRGQLGDGTTTSSASPVRVAGLSA----AM 952

Query: 410 SVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
           +VS G  ++  +  DG V+ WG N  GQLG G  + R  P  V
Sbjct: 953 NVSVGQAYSLAVLPDGTVWSWGANDSGQLGDGTNVARTTPKPV 995



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 116/422 (27%), Positives = 170/422 (40%), Gaps = 50/422 (11%)

Query: 53   GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
            G  +++A+     + +WG+ D  GQ  +  G +     P P+   A +    AG  H VA
Sbjct: 957  GQAYSLAVLPDGTVWSWGANDS-GQ--LGDGTNVARTTPKPVQDLADVKAVTAGAHHVVA 1013

Query: 113  VTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTE-QVSPRSQVSRSSGG 171
            V   G V+ WG          FG +  GT   +    R    L   + S   Q S +  G
Sbjct: 1014 VRHDGTVWGWG-------ANAFGQVGDGTHFWRFRPVRVEGLLNAVETSAGEQHSLALLG 1066

Query: 172  TSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGR 231
                    GS E G            AES  S +      P    L P V   +V+A  +
Sbjct: 1067 DERALS-WGSHEYGQL--------GDAESGPSLEPVGVKLPSSKVLVPAV---SVSAWHQ 1114

Query: 232  HTLALSDIGQVWGWGYGGEGQL---------------GLGSRIRMVSSPHPIPCIES--- 273
            H  AL   G V  WG   +GQL               GLG+ + +  +      + S   
Sbjct: 1115 HAAALLADGTVQTWGGNADGQLGDGTTESRATPITVAGLGAMVAVAPAARHTLALRSDGT 1174

Query: 274  --SYGKDRSAALSRGSVNSEGPGFRVPG-NYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
              ++G +    L  GS        +V G   V  IA G  HS  + + G +  +G+ ++G
Sbjct: 1175 VWAWGDNTFGQLGDGSNTRRTLPVQVVGLEKVTAIAAGSYHSLAVREDGTVWAWGYNVFG 1234

Query: 331  QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            Q G G+ D    P  +  L G     VA G +H++ +  DG ++A G N  GQLG G   
Sbjct: 1235 QLGDGTMDARAVPTRMLGLDG--AVAVAGGEYHSLMLRFDGTLWATGNNSHGQLGEG--- 1289

Query: 391  AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
                 RL     +E    ++V  G  H+  + +DG V+ WG N  GQLG G V  R +P+
Sbjct: 1290 -TFTNRLSPFQVVELDQVRTVRAGGYHSVALREDGTVWTWGHNGQGQLGDGTVTTRRVPA 1348

Query: 451  QV 452
             V
Sbjct: 1349 PV 1350



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 108/254 (42%), Gaps = 29/254 (11%)

Query: 222  RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR------IRMVSSPHPIPCIESSY 275
            ++  +AAG  H+LA+ + G VW WGY   GQLG G+        RM+     +      Y
Sbjct: 1205 KVTAIAAGSYHSLAVREDGTVWAWGYNVFGQLGDGTMDARAVPTRMLGLDGAVAVAGGEY 1264

Query: 276  --------------GKDRSAALSRGSVNSEGPGFRVPG-NYVKGIACGGRHSAVITDAGA 320
                          G +    L  G+  +    F+V   + V+ +  GG HS  + + G 
Sbjct: 1265 HSLMLRFDGTLWATGNNSHGQLGEGTFTNRLSPFQVVELDQVRTVRAGGYHSVALREDGT 1324

Query: 321  LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
            + T+G    GQ G G+      P  V  L    I  V AG  HT  + S  + +A+G N 
Sbjct: 1325 VWTWGHNGQGQLGDGTVTTRRVPAPVPGL--TAIASVGAGTSHTFAVGS--ETWAWGRNS 1380

Query: 381  FGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL 440
             GQLGTG       P L+    L  V  KSV  G   +     DG    WG N +G LG+
Sbjct: 1381 HGQLGTGDSSDRLEPTLVKG--LHGV--KSVLAGGDFSVAQGADGSAMSWGTNVHGTLGI 1436

Query: 441  GDVIDRNIPSQVTI 454
            G    R +P  VT+
Sbjct: 1437 GLPGQRTVPGAVTL 1450



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 139/546 (25%), Positives = 203/546 (37%), Gaps = 127/546 (23%)

Query: 14  VFMWGY-LPGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWG-- 70
           VF WG    G L   +   SPL VR+    G         G   A+ +     L TWG  
Sbjct: 320 VFAWGLNSQGQLGIGTTADSPLPVRVR---GLGAVTSLAAGTQHAVVLRADGTLWTWGHG 376

Query: 71  STDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPS 130
           +T  LG      G    +  P  +   +++   A+G  H VA    G V+TWG       
Sbjct: 377 ATGQLGH-----GSSERMLSPEVVTRLSNVASVASGSFHSVAALSDGSVWTWGRNTN--- 428

Query: 131 GRVFGDLSTGTGLDKDVFER---QSSFLTEQVSPRSQVSRSSGGT--SSGTDGRGSGEEG 185
               G L  GT  ++ +  R    S  ++   S     +  S GT    G + +G   +G
Sbjct: 429 ----GQLGDGTTTERHLPVRVPGLSGVVSVSASGHHSFALRSDGTVWGWGRNAQGQMGDG 484

Query: 186 SKRRRISLAKQTAESS----SSGDENLSAF---------------------------PCL 214
           + + R S A+    SS    +SG  ++ A                            P  
Sbjct: 485 TTKDRASPARVEGLSSVKALASGGSHMVALRTDGTVWTWGYNGAGQLGDGTTTDRRAPVQ 544

Query: 215 VTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES- 273
           VT   GV   +VAAG   +LAL   G VW WG G EGQLG G+ ++  +SP  +  +   
Sbjct: 545 VTGLSGV--TSVAAGAYFSLALRTDGTVWAWGDGFEGQLGDGAGVQR-ASPVQVTGLTRV 601

Query: 274 --------------------SYGKDRSAALSRGSVNSEGPGFRVPG-NYVKGIACGGRHS 312
                               ++G +    +  GS +      +V G   V  +  G  HS
Sbjct: 602 VKLAAGAAHGLAVRDDGTVWAWGDNTEGQMGDGSWSDRFRAVQVYGLTGVSSVVGGLYHS 661

Query: 313 AVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGD 372
             +   G L  +G   YGQ G G     +    V  L GI++ G  A   H + +  DG 
Sbjct: 662 MALAQDGTLRAWGGNAYGQFGDGGVTPRVVAGAVPGLSGIKLLG--ASYLHVLAVREDGM 719

Query: 373 VYAFGGNQFGQLGTGGDQAETLP---------RLLDAPSLENVH---------------- 407
           +  +G N+FGQLG G     +LP         R L A    ++                 
Sbjct: 720 LLTWGYNRFGQLGLGAAGWSSLPVQVRGLGQGRRLSAGRAHSLLVRADGTVLAWGQNTSG 779

Query: 408 ---------------------SKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR 446
                                +++ S G +H+ V+A DG V+ WG N  GQLG G V  R
Sbjct: 780 QLGDGSTTHRASPVLARNLPCARAASAGRQHSLVLACDGTVWSWGGNSQGQLGDGGVTSR 839

Query: 447 NIPSQV 452
             P++V
Sbjct: 840 AYPAKV 845



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 83/319 (26%), Positives = 128/319 (40%), Gaps = 72/319 (22%)

Query: 91   PFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFER 150
            P  +     +   AAG  H +AV E G V+ WG+        VFG L  GT +D      
Sbjct: 1197 PVQVVGLEKVTAIAAGSYHSLAVREDGTVWAWGYN-------VFGQLGDGT-MDARAVPT 1248

Query: 151  QSSFLTEQVSP-----RSQVSRSSGGT-SSGTDGRGSGEEGSKRRRISLAKQTAESSSSG 204
            +   L   V+       S + R  G   ++G +  G   EG+   R+S  +         
Sbjct: 1249 RMLGLDGAVAVAGGEYHSLMLRFDGTLWATGNNSHGQLGEGTFTNRLSPFQ--------- 1299

Query: 205  DENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSS 264
                     +V L+   ++ TV AGG H++AL + G VW WG+ G+GQLG G+ +     
Sbjct: 1300 ---------VVELD---QVRTVRAGGYHSVALREDGTVWTWGHNGQGQLGDGT-VTTRRV 1346

Query: 265  PHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTF 324
            P P+P + +                            +  +  G  H+  +       T+
Sbjct: 1347 PAPVPGLTA----------------------------IASVGAGTSHTFAVGSE----TW 1374

Query: 325  GWGL--YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFG 382
             WG   +GQ G G + D L P  V  L G++   V AG   ++   +DG   ++G N  G
Sbjct: 1375 AWGRNSHGQLGTGDSSDRLEPTLVKGLHGVK--SVLAGGDFSVAQGADGSAMSWGTNVHG 1432

Query: 383  QLGTGGDQAETLPRLLDAP 401
             LG G     T+P  +  P
Sbjct: 1433 TLGIGLPGQRTVPGAVTLP 1451



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/133 (35%), Positives = 69/133 (51%), Gaps = 10/133 (7%)

Query: 343 PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL--DA 400
           P   S  L      VAAG  H++ ++  G V+A+GGN  GQLGTG   + +  R++    
Sbjct: 39  PAARSQALASATSKVAAGAQHSLYVTQAGTVWAWGGNGSGQLGTG---SVSFQRVVAQQV 95

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVP 459
           P L +V   S++ G  H+  +  D  V+ WG N  GQ+G G  +DR  P +V  +   V 
Sbjct: 96  PGLTDV--TSIAAGDAHSLALRADRTVWTWGGNNAGQVGDGTNVDRPTPQKVPGLSDVVA 153

Query: 460 RNVACGWWHTLLL 472
             VA G +H+L L
Sbjct: 154 --VAAGEFHSLAL 164



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 75/269 (27%), Positives = 114/269 (42%), Gaps = 36/269 (13%)

Query: 232 HTLALSDIGQVWGWGYGGEGQLGLGS--------RIRMVSSPHPIPCIES---------- 273
           H LA+ + G +  WGY   GQLGLG+        ++R +     +    +          
Sbjct: 710 HVLAVREDGMLLTWGYNRFGQLGLGAAGWSSLPVQVRGLGQGRRLSAGRAHSLLVRADGT 769

Query: 274 --SYGKDRSAALSRGSVNSEG-PGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
             ++G++ S  L  GS      P         +  + G +HS V+   G + ++G    G
Sbjct: 770 VLAWGQNTSGQLGDGSTTHRASPVLARNLPCARAASAGRQHSLVLACDGTVWSWGGNSQG 829

Query: 331 QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG--G 388
           Q G G       P  V  L G+    V AG   ++ + +DG V+ +G N  GQLG G  G
Sbjct: 830 QLGDGGVTSRAYPAKVEGLWGV--VAVLAGGDSSMVLRADGTVWTWGANGSGQLGDGTLG 887

Query: 389 DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNI 448
           D+A  L    +   L  + +  +  G  H  V++ DG V+ WG N  G+  LGD    + 
Sbjct: 888 DRASPL----EVKGLAGIATGVM--GEAHALVVSQDGTVWAWGAN--GRGQLGDGTTTSS 939

Query: 449 PSQVTIEGC-VPRNVACGWWHTLLLAVPP 476
            S V + G     NV+ G      LAV P
Sbjct: 940 ASPVRVAGLSAAMNVSVG--QAYSLAVLP 966


>gi|295696487|ref|YP_003589725.1| S-layer protein [Kyrpidia tusciae DSM 2912]
 gi|295412089|gb|ADG06581.1| S-layer domain protein [Kyrpidia tusciae DSM 2912]
          Length = 1423

 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 88/257 (34%), Positives = 126/257 (49%), Gaps = 32/257 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLG-----------------SRIRMVSS- 264
           +A V+AG  H+LAL+D G+V+ WG    GQLG G                 S I++V++ 
Sbjct: 122 VAQVSAGESHSLALTDDGRVFAWGLNSSGQLGDGTTADSRTPVQVQGLATDSTIKVVAAG 181

Query: 265 -PHPIPCIES----SYGKDRSAALSRGSVNSEGPGFRV---PGNYVKGIACGGRHSAVIT 316
             H +         ++GK+ S  L   S        +V   P N V  +A GG HS  +T
Sbjct: 182 GNHSLALTSDGRVFAWGKNSSGQLGNNSTVDSSIPVQVQGLPAN-VTAVAAGGNHSLALT 240

Query: 317 DAGALLTFGWGLYGQCGQGSTDDELSPNCVSSL-LGIQIEGVAAGLWHTICISSDGDVYA 375
             G +  +G    GQ G G+T +  +P  V+ L  G +   V+AG  H++ +  DG VYA
Sbjct: 241 SDGRIYAWGLNSSGQLGDGTTSNSSTPVLVAGLPAGSKPVAVSAGKDHSLALMQDGTVYA 300

Query: 376 FGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKY 435
           +GGN +GQLG G   A  +P  +    L NV   +VS G   +  +  DG V+ WG N  
Sbjct: 301 WGGNSYGQLGNGTTTASEMP--VQVTGLANV--TAVSAGGSDSLALTSDGYVYAWGLNSS 356

Query: 436 GQLGLGDVIDRNIPSQV 452
           GQLG G   +RN P +V
Sbjct: 357 GQLGDGTTSNRNTPVRV 373



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 88/254 (34%), Positives = 119/254 (46%), Gaps = 26/254 (10%)

Query: 224 ATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI-RMVSSP-HPIPCI-ESSYGKDRS 280
           A V+AGG H+L L+    VW WG    GQLG G+   R   +P   +P + + S G+  S
Sbjct: 73  AAVSAGGSHSLVLTSDQTVWAWGDNTNGQLGDGTTTGRQTPTPAQGLPSVAQVSAGESHS 132

Query: 281 AALSRG------SVNSEG-------PGFRVP--------GNYVKGIACGGRHSAVITDAG 319
            AL+         +NS G          R P         + +K +A GG HS  +T  G
Sbjct: 133 LALTDDGRVFAWGLNSSGQLGDGTTADSRTPVQVQGLATDSTIKVVAAGGNHSLALTSDG 192

Query: 320 ALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN 379
            +  +G    GQ G  ST D   P  V  L    +  VAAG  H++ ++SDG +YA+G N
Sbjct: 193 RVFAWGKNSSGQLGNNSTVDSSIPVQVQGLPA-NVTAVAAGGNHSLALTSDGRIYAWGLN 251

Query: 380 QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG 439
             GQLG G     + P L+ A         +VS G  H+  +  DG V+ WG N YGQLG
Sbjct: 252 SSGQLGDGTTSNSSTPVLV-AGLPAGSKPVAVSAGKDHSLALMQDGTVYAWGGNSYGQLG 310

Query: 440 LGDVIDRNIPSQVT 453
            G      +P QVT
Sbjct: 311 NGTTTASEMPVQVT 324



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 87/171 (50%), Gaps = 9/171 (5%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           ++ GG HS V+T    +  +G    GQ G G+T    +P     L    +  V+AG  H+
Sbjct: 75  VSAGGSHSLVLTSDQTVWAWGDNTNGQLGDGTTTGRQTPTPAQGLP--SVAQVSAGESHS 132

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           + ++ DG V+A+G N  GQLG G       P  +   + ++   K V+ G  H+  +  D
Sbjct: 133 LALTDDGRVFAWGLNSSGQLGDGTTADSRTPVQVQGLATDSTI-KVVAAGGNHSLALTSD 191

Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRN---VACGWWHTLLL 472
           G+VF WG N  GQLG    +D +IP QV  +G +P N   VA G  H+L L
Sbjct: 192 GRVFAWGKNSSGQLGNNSTVDSSIPVQV--QG-LPANVTAVAAGGNHSLAL 239



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 99/397 (24%), Positives = 153/397 (38%), Gaps = 59/397 (14%)

Query: 91  PFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFER 150
           P P     S+ + +AG +H +A+T+ G V+ WG           G L  GT  D     +
Sbjct: 113 PTPAQGLPSVAQVSAGESHSLALTDDGRVFAWGLNSS-------GQLGDGTTADSRTPVQ 165

Query: 151 QSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSA 210
                T+     S +   + G      G  S    S  R  +  K ++    +     S+
Sbjct: 166 VQGLATD-----STIKVVAAG------GNHSLALTSDGRVFAWGKNSSGQLGNNSTVDSS 214

Query: 211 FPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPC 270
            P  V   P   +  VAAGG H+LAL+  G+++ WG    GQLG G+     +S    P 
Sbjct: 215 IPVQVQGLPA-NVTAVAAGGNHSLALTSDGRIYAWGLNSSGQLGDGT-----TSNSSTPV 268

Query: 271 IESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
           +         A L  GS                 ++ G  HS  +   G +  +G   YG
Sbjct: 269 LV--------AGLPAGS-------------KPVAVSAGKDHSLALMQDGTVYAWGGNSYG 307

Query: 331 QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
           Q G G+T     P  V+ L    +  V+AG   ++ ++SDG VYA+G N  GQLG G   
Sbjct: 308 QLGNGTTTASEMPVQVTGL--ANVTAVSAGGSDSLALTSDGYVYAWGLNSSGQLGDGTTS 365

Query: 391 AETLP----------RLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL 440
               P           LL    L +  S  ++     T+ + D       G N+   L  
Sbjct: 366 NRNTPVRVFSVLSTGALLTDLQLSDGSSNPIALSPGFTSTVMDYTATVGAGVNQV--LLY 423

Query: 441 GDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAVPPT 477
                  +   +T+    P ++A G   ++ L+  PT
Sbjct: 424 AKPAASGVTMTLTVNSQSPVSLAAGVKQSVALSSDPT 460


>gi|410903564|ref|XP_003965263.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Takifugu
            rubripes]
          Length = 3883

 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 86/246 (34%), Positives = 130/246 (52%), Gaps = 35/246 (14%)

Query: 232  HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
            H++AL++ G+V+ WG G  G+LG G+  R          IE+  G+D             
Sbjct: 3116 HSMALTETGEVFSWGDGDFGKLGHGNNERQRRPKQ----IEALQGED------------- 3158

Query: 292  GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                      V  +ACG RHSAV+T  G L TFG G  G+ GQ ST +++ P  V++L G
Sbjct: 3159 ----------VVQLACGFRHSAVVTADGKLFTFGSGESGRLGQRSTSNKMLPERVAALEG 3208

Query: 352  IQIEGVAAGLWHTICISSDG-DVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
              +  V+ GL HT+ +S DG  V+AFG   +G+LG G   A+  P+ ++   L N   K 
Sbjct: 3209 YHVGQVSCGLNHTLVLSLDGMAVWAFGDGDYGKLGAGSSTAKYYPQKVE--QLCNKGMKK 3266

Query: 411  VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVI--DRNIPSQV-TIEGCVPRNVACGWW 467
            V CGA+ + V+A DG V+ +G  +   +GL D +  +R+ P  V ++EG    ++A G  
Sbjct: 3267 VCCGAQFSVVVACDGHVYTFGQERL--IGLPDSMLKNRSNPQVVPSLEGLFIEDIAVGCE 3324

Query: 468  HTLLLA 473
            H L L+
Sbjct: 3325 HVLALS 3330



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 107/204 (52%), Gaps = 6/204 (2%)

Query: 275  YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
            +G  R   L+    N   P      +  + + CG   S +I   G +   G G YG+ GQ
Sbjct: 3025 WGNGRYGQLAGTGTNLTVPTLAPSLSQTQQVVCGQNCSFLIQSNGVVTAVGEGQYGRLGQ 3084

Query: 335  GSTDDELSPNCVSSLLGIQIEGVAAGL---WHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
            G++DD   P  +S+  G  +  +        H++ ++  G+V+++G   FG+LG G ++ 
Sbjct: 3085 GNSDDLYVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSWGDGDFGKLGHGNNER 3144

Query: 392  ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
            +  P+ ++A   E+V    ++CG RH+AV+  DGK+F +G  + G+LG     ++ +P +
Sbjct: 3145 QRRPKQIEALQGEDV--VQLACGFRHSAVVTADGKLFTFGSGESGRLGQRSTSNKMLPER 3202

Query: 452  V-TIEGCVPRNVACGWWHTLLLAV 474
            V  +EG     V+CG  HTL+L++
Sbjct: 3203 VAALEGYHVGQVSCGLNHTLVLSL 3226



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 88/307 (28%), Positives = 137/307 (44%), Gaps = 39/307 (12%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGR---HTLALSDIGQVWGWGYGGEGQLGLGSRI- 259
           GD N  + P  + L P   I  V++      HTLA++  G+V+ WG G  G+LG G+   
Sbjct: 447 GDSNNQSLPKKLVLEPHRNIKKVSSSKGSDGHTLAITVDGEVFSWGDGEYGKLGHGNSAT 506

Query: 260 ----RMVSSP-HPIPCIESSYGKDRSAALSR------------GSVNSEGPGFRVPGNYV 302
               +++  P      + +S G   SAA+++            G +       R     V
Sbjct: 507 QKYPKIIQGPLFSKIVVSASAGYRHSAAVTKDGELYTWGEGDFGRLGHSDSQSRNMPTLV 566

Query: 303 KGI------ACGGRHS-AVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
           K I      ACG  H+ AV  D   + +FG G  G+ G G T+    P  + +L G  I 
Sbjct: 567 KDISGVGQVACGSSHTIAVAQDGRTVWSFGGGDNGKLGHGDTNRVYRPKVIEALHGFIIR 626

Query: 356 GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL-PRLLDAPSLENVHSKSVSCG 414
            V AG   ++ ++S G V+A+G      LG G  +  +L PR ++  S+  +    +SCG
Sbjct: 627 KVCAGSQSSLALTSAGQVFAWGCGSC--LGCGSSETTSLRPRFVEDLSITKI--IDISCG 682

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDV---IDRNIPSQVT-IEGCVPRNVACGWWHTL 470
             H   ++ + +V+ WG N  GQ G G     I R  P +V  +EG   + +  G  H+L
Sbjct: 683 DSHCLALSHENEVYAWGNNTMGQCGQGHTSTPITR--PKKVLGLEGVSIQQITAGTSHSL 740

Query: 471 LLAVPPT 477
                PT
Sbjct: 741 AWTAVPT 747



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 111/418 (26%), Positives = 164/418 (39%), Gaps = 62/418 (14%)

Query: 49   VCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWA 108
            VCG  C F +  +     +  G    LGQ          I   F       +V +     
Sbjct: 3056 VCGQNCSFLIQSNGVVTAVGEGQYGRLGQGNSDDLYVPTIISAFQGYVVTQLVTSCGSDG 3115

Query: 109  HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRS 168
            H +A+TE GEV++WG  +       FG L  G    +   ++  +   E V   +   R 
Sbjct: 3116 HSMALTETGEVFSWGDGD-------FGKLGHGNNERQRRPKQIEALQGEDVVQLACGFRH 3168

Query: 169  SGGTSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
            S   ++  DG+    GSGE G   +R +  K   E  ++ +              G  + 
Sbjct: 3169 SAVVTA--DGKLFTFGSGESGRLGQRSTSNKMLPERVAALE--------------GYHVG 3212

Query: 225  TVAAGGRHTLALSDIGQ-VWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAAL 283
             V+ G  HTL LS  G  VW +G G  G+LG GS                 Y +      
Sbjct: 3213 QVSCGLNHTLVLSLDGMAVWAFGDGDYGKLGAGSST------------AKYYPQKVEQLC 3260

Query: 284  SRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
            ++G               +K + CG + S V+   G + TFG             +  +P
Sbjct: 3261 NKG---------------MKKVCCGAQFSVVVACDGHVYTFGQERLIGLPDSMLKNRSNP 3305

Query: 344  NCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSL 403
              V SL G+ IE +A G  H + +SS GDVYA+G N  GQLG G       P L+ A   
Sbjct: 3306 QVVPSLEGLFIEDIAVGCEHVLALSSTGDVYAWGCNSEGQLGLGHCNPVKEPTLITALQG 3365

Query: 404  ENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
            +N+  K +S G  H++           G     QLGL     +++P Q  T++ C PR
Sbjct: 3366 KNI--KQISAGRCHSSAWTTPSTSKNSGGPGNLQLGL----PQSVPPQYNTLKDCSPR 3417



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 92/175 (52%), Gaps = 7/175 (4%)

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
           + I  G   +  ++  G++   G G YG+ G G ++++  P  +       I+ V++   
Sbjct: 415 QTIEAGQYCTFSVSTDGSVKACGKGSYGRLGLGDSNNQSLPKKLVLEPHRNIKKVSSSKG 474

Query: 363 ---HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
              HT+ I+ DG+V+++G  ++G+LG G    +  P+++  P    +   S S G RH+A
Sbjct: 475 SDGHTLAITVDGEVFSWGDGEYGKLGHGNSATQKYPKIIQGPLFSKI-VVSASAGYRHSA 533

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLA 473
            +  DG+++ WG   +G+LG  D   RN+P+ V  I G     VACG  HT+ +A
Sbjct: 534 AVTKDGELYTWGEGDFGRLGHSDSQSRNMPTLVKDISGV--GQVACGSSHTIAVA 586



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 88/323 (27%), Positives = 132/323 (40%), Gaps = 65/323 (20%)

Query: 52  GGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAH 109
           G  G  +AI+   ++ +WG  +   LG     + K+ +I +  PL ++  +V A+AG+ H
Sbjct: 474 GSDGHTLAITVDGEVFSWGDGEYGKLGHGNSATQKYPKIIQG-PLFSKI-VVSASAGYRH 531

Query: 110 CVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSS 169
             AVT+ GE+YTWG  +       FG L        D   R    L + +S   QV+  S
Sbjct: 532 SAAVTKDGELYTWGEGD-------FGRLG-----HSDSQSRNMPTLVKDISGVGQVACGS 579

Query: 170 GGT-SSGTDGR-----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRI 223
             T +   DGR     G G+ G                  GD N    P ++    G  I
Sbjct: 580 SHTIAVAQDGRTVWSFGGGDNGKL--------------GHGDTNRVYRPKVIEALHGFII 625

Query: 224 ATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAAL 283
             V AG + +LAL+  GQV+ WG G    LG GS       P         + +D S   
Sbjct: 626 RKVCAGSQSSLALTSAGQVFAWGCG--SCLGCGSSETTSLRPR--------FVEDLSI-- 673

Query: 284 SRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS- 342
                             +  I+CG  H   ++    +  +G    GQCGQG T   ++ 
Sbjct: 674 ----------------TKIIDISCGDSHCLALSHENEVYAWGNNTMGQCGQGHTSTPITR 717

Query: 343 PNCVSSLLGIQIEGVAAGLWHTI 365
           P  V  L G+ I+ + AG  H++
Sbjct: 718 PKKVLGLEGVSIQQITAGTSHSL 740



 Score = 42.7 bits (99), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 48/83 (57%), Gaps = 7/83 (8%)

Query: 372  DVYAFGGNQFGQL-GTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
            DVY +G  ++GQL GTG +   T+P L  APSL    ++ V CG   + +I  +G V   
Sbjct: 3021 DVYLWGNGRYGQLAGTGTNL--TVPTL--APSLS--QTQQVVCGQNCSFLIQSNGVVTAV 3074

Query: 431  GWNKYGQLGLGDVIDRNIPSQVT 453
            G  +YG+LG G+  D  +P+ ++
Sbjct: 3075 GEGQYGRLGQGNSDDLYVPTIIS 3097


>gi|405972531|gb|EKC37295.1| X-linked retinitis pigmentosa GTPase regulator [Crassostrea gigas]
          Length = 663

 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 64/178 (35%), Positives = 99/178 (55%), Gaps = 4/178 (2%)

Query: 295 FRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQI 354
           F V G+  K +ACG  H+A++T++G L TFG   +GQ G         P CV  L   ++
Sbjct: 31  FWVRGDKAKSVACGDEHTALVTESGRLFTFGVNDWGQLGIDEVKVSTRPCCVKKLKPEKV 90

Query: 355 EGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
           + VA G  HTI  +  G +Y FG N  GQLG     +   P  ++    E    K+++ G
Sbjct: 91  KVVACGRIHTIVATESGCLYTFGANGDGQLGVEDIPSSNCPVKVEC---EPRQYKALAAG 147

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           A H+  + DDG+++ WG    GQLGLGD+ D++ P+ ++ +  V  +VACG++HT  +
Sbjct: 148 ADHSVALTDDGELYVWGGGSEGQLGLGDIDDKSTPTLLSTDNKV-ISVACGYYHTAFV 204



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/234 (30%), Positives = 110/234 (47%), Gaps = 35/234 (14%)

Query: 207 NLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPH 266
            +S  PC V      ++  VA G  HT+  ++ G ++ +G  G+GQLG+   I   + P 
Sbjct: 74  KVSTRPCCVKKLKPEKVKVVACGRIHTIVATESGCLYTFGANGDGQLGV-EDIPSSNCPV 132

Query: 267 PIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGW 326
            + C    Y                           K +A G  HS  +TD G L  +G 
Sbjct: 133 KVECEPRQY---------------------------KALAAGADHSVALTDDGELYVWGG 165

Query: 327 GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
           G  GQ G G  DD+ +P  +S+    ++  VA G +HT  ++  G+V+ FG    G+LG 
Sbjct: 166 GSEGQLGLGDIDDKSTPTLLST--DNKVISVACGYYHTAFVTDVGEVFTFGEGDGGKLGQ 223

Query: 387 GGDQAETL-PRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG 439
           G D  + + P+ ++ P      +KSV+CG  HT V+ + GKV+ +G    GQLG
Sbjct: 224 GTDYGKAVAPKKVNIPE----KAKSVACGGSHTVVLTECGKVYTFGEGGNGQLG 273



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 128/256 (50%), Gaps = 38/256 (14%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G +  +VA G  HT  +++ G+++ +G    GQLG+   +++ + P    C++       
Sbjct: 35  GDKAKSVACGDEHTALVTESGRLFTFGVNDWGQLGI-DEVKVSTRPC---CVK------- 83

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDD 339
                           ++    VK +ACG  H+ V T++G L TFG    GQ G    +D
Sbjct: 84  ----------------KLKPEKVKVVACGRIHTIVATESGCLYTFGANGDGQLG---VED 124

Query: 340 ELSPNCVSSLL--GIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
             S NC   +     Q + +AAG  H++ ++ DG++Y +GG   GQLG G    ++ P L
Sbjct: 125 IPSSNCPVKVECEPRQYKALAAGADHSVALTDDGELYVWGGGSEGQLGLGDIDDKSTPTL 184

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNI-PSQVTIEG 456
           L   S +N    SV+CG  HTA + D G+VF +G    G+LG G    + + P +V I  
Sbjct: 185 L---STDN-KVISVACGYYHTAFVTDVGEVFTFGEGDGGKLGQGTDYGKAVAPKKVNIPE 240

Query: 457 CVPRNVACGWWHTLLL 472
              ++VACG  HT++L
Sbjct: 241 KA-KSVACGGSHTVVL 255



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 83/280 (29%), Positives = 127/280 (45%), Gaps = 45/280 (16%)

Query: 204 GDENLSAFPCLVTLNPGVR-IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMV 262
           G E++ +  C V +    R    +AAG  H++AL+D G+++ WG G EGQLGLG      
Sbjct: 121 GVEDIPSSNCPVKVECEPRQYKALAAGADHSVALTDDGELYVWGGGSEGQLGLGDI---- 176

Query: 263 SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL 322
                          D+S            P      N V  +ACG  H+A +TD G + 
Sbjct: 177 --------------DDKST-----------PTLLSTDNKVISVACGYYHTAFVTDVGEVF 211

Query: 323 TFGWGLYGQCGQGSTD--DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
           TFG G  G+ GQG TD    ++P  V+  +  + + VA G  HT+ ++  G VY FG   
Sbjct: 212 TFGEGDGGKLGQG-TDYGKAVAPKKVN--IPEKAKSVACGGSHTVVLTECGKVYTFGEGG 268

Query: 381 FGQLGTGGDQAETLPRLLDAPSLENVHSK--SVSCGARHTAVIADDGKVFCWGWNKYGQL 438
            GQLG             + P   N   K   ++ G  HTA++ + G+++ +G  ++ +L
Sbjct: 269 NGQLGHKNKYF-----YCETPVWLNFKHKVTQIAAGENHTALVTEKGQLYTFGDGRHAKL 323

Query: 439 GLGDVIDRN--IPSQVT-IEGCVPRNVACGWWHTLLLAVP 475
           GL      N   P +       +   V+CG  H ++LA P
Sbjct: 324 GLDHECYSNQYFPQRSKRFSKFIVTQVSCGGCHMIVLAYP 363



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 78/158 (49%), Gaps = 12/158 (7%)

Query: 315 ITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVY 374
           I ++GA+ TFG   +G        D L PN    + G + + VA G  HT  ++  G ++
Sbjct: 9   IPESGAIFTFGKSRFG--------DNL-PNKFW-VRGDKAKSVACGDEHTALVTESGRLF 58

Query: 375 AFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNK 434
            FG N +GQLG    +  T P  +     E V  K V+CG  HT V  + G ++ +G N 
Sbjct: 59  TFGVNDWGQLGIDEVKVSTRPCCVKKLKPEKV--KVVACGRIHTIVATESGCLYTFGANG 116

Query: 435 YGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
            GQLG+ D+   N P +V  E    + +A G  H++ L
Sbjct: 117 DGQLGVEDIPSSNCPVKVECEPRQYKALAAGADHSVAL 154



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 98/249 (39%), Gaps = 61/249 (24%)

Query: 91  PFPLPTEASIVKA-AAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFE 149
           P  +  E    KA AAG  H VA+T+ GE+Y WG       G   G L  G     D+ +
Sbjct: 131 PVKVECEPRQYKALAAGADHSVALTDDGELYVWG-------GGSEGQLGLG-----DIDD 178

Query: 150 RQSSFLTEQVSPRSQVSRSSGGTSSGTD-----GRGSGEEGSKRRRISLAKQTAESSSSG 204
           + +  L    +    V+     T+  TD       G G+ G   +     K  A      
Sbjct: 179 KSTPTLLSTDNKVISVACGYYHTAFVTDVGEVFTFGEGDGGKLGQGTDYGKAVAPKK--- 235

Query: 205 DENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSS 264
                       +N   +  +VA GG HT+ L++ G+V+ +G GG GQLG  ++     +
Sbjct: 236 ------------VNIPEKAKSVACGGSHTVVLTECGKVYTFGEGGNGQLGHKNKYFYCET 283

Query: 265 PHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTF 324
           P  +                          F+   + V  IA G  H+A++T+ G L TF
Sbjct: 284 PVWL-------------------------NFK---HKVTQIAAGENHTALVTEKGQLYTF 315

Query: 325 GWGLYGQCG 333
           G G + + G
Sbjct: 316 GDGRHAKLG 324



 Score = 45.1 bits (105), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 67/279 (24%), Positives = 105/279 (37%), Gaps = 77/279 (27%)

Query: 51  GGGCGFAMAISDSRKLITWG--STDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWA 108
             G   ++A++D  +L  WG  S   LG      G   +   P  L T+  ++  A G+ 
Sbjct: 145 AAGADHSVALTDDGELYVWGGGSEGQLGL-----GDIDDKSTPTLLSTDNKVISVACGYY 199

Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRS 168
           H   VT+ GEV+T+G  +        G L  GT   K V  ++ +       P    S +
Sbjct: 200 HTAFVTDVGEVFTFGEGDG-------GKLGQGTDYGKAVAPKKVNI------PEKAKSVA 246

Query: 169 SGGTSS---------GTDGR-GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCL--VT 216
            GG+ +          T G  G+G+ G K +                     F C   V 
Sbjct: 247 CGGSHTVVLTECGKVYTFGEGGNGQLGHKNKY--------------------FYCETPVW 286

Query: 217 LNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYG 276
           LN   ++  +AAG  HT  +++ GQ++ +G G   +LGL              C  + Y 
Sbjct: 287 LNFKHKVTQIAAGENHTALVTEKGQLYTFGDGRHAKLGLDHE-----------CYSNQYF 335

Query: 277 KDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVI 315
             RS   S+  V                ++CGG H  V+
Sbjct: 336 PQRSKRFSKFIVTQ--------------VSCGGCHMIVL 360


>gi|189241718|ref|XP_968558.2| PREDICTED: similar to hect domain and RLD 2 [Tribolium castaneum]
          Length = 4733

 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 76/216 (35%), Positives = 114/216 (52%), Gaps = 33/216 (15%)

Query: 220 GVRIATVAAG--GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
           G+ +  +AA   G+H LAL+   +V+ WG G  G+LG G      S+      I++  GK
Sbjct: 512 GINMIKIAAHPEGKHYLALTKDYEVYSWGNGDGGRLGHGD----TSTKEEPTLIQALKGK 567

Query: 278 DRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST 337
           D                       +  + CGG +SA I+  GAL T+G G YG+ G G+ 
Sbjct: 568 D-----------------------IIDVECGGTYSAAISANGALYTWGRGNYGRLGHGTA 604

Query: 338 DDELSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLP 395
           +D L+P  +S+L    I  VA G +  HT+CI+S G VY++G   +G+LG GG     LP
Sbjct: 605 EDCLTPTMISALSDEHIIKVACGSFYAHTLCITSQGKVYSWGDGDYGKLGRGGSDGSKLP 664

Query: 396 RLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWG 431
           RL++   L+NV    V CGA+ +  +++DG V+ WG
Sbjct: 665 RLIE--KLQNVKIVQVYCGAQFSVALSEDGHVYTWG 698



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 85/303 (28%), Positives = 132/303 (43%), Gaps = 80/303 (26%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            ++   V +GG+H LALS    V+ WG G +G+LG G+R+    +P  I  ++        
Sbjct: 3957 IKKIAVNSGGKHCLALSADNDVYSWGEGDDGKLGHGNRL-ACETPKLIEALQ-------- 4007

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                              G  +  IACGG HSA IT  G L T+G G YG+ G G ++D+
Sbjct: 4008 ------------------GYEIIDIACGGAHSAAITSTGQLYTWGKGRYGRLGHGDSEDQ 4049

Query: 341  LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  +  L+G ++  VA  +G   T+CI+ D +V+++G   +G+LG GG     +P+ +
Sbjct: 4050 LKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPKKI 4109

Query: 399  DA--------------------------------------------------PSLENVHS 408
            ++                                                   +L+    
Sbjct: 4110 ESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGTGEHVRRPKKVAALQGKKI 4169

Query: 409  KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWW 467
             S++ G+ H    +D+G+VF WG N  GQLG         P  V+ ++G    NVACG  
Sbjct: 4170 ISIATGSLHCVACSDEGEVFTWGDNDEGQLGDDTTNAIQRPRLVSALQGKKITNVACGSA 4229

Query: 468  HTL 470
            HTL
Sbjct: 4230 HTL 4232



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 128/303 (42%), Gaps = 80/303 (26%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            ++   V +GG+H +AL+  G+V+ WG G +G+LG G+R+ +   P  I  + S   +D  
Sbjct: 2981 IKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLNL-DKPKMIEALRSKKIRD-- 3037

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                    IACG  HSA IT +G L T+G G YG+ G G    +
Sbjct: 3038 ------------------------IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNITQ 3073

Query: 341  LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  + SL+G +I  VA G     T+ ++ +G V+++G   FG+LG GG +   +P  +
Sbjct: 3074 LKPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGRGGSEGCNIPHNI 3133

Query: 399  D--------------------------------------------------APSLENVHS 408
            +                                                    SL++   
Sbjct: 3134 ERLNALEVVQIECGAQFSLALTKTGEVWTWGKGDYFRLGHGSDQHVRKPTVIESLKDKKV 3193

Query: 409  KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWW 467
              V+ GA H   + D G+V+ WG N +GQ G G  I    P+ V  +E      VACG  
Sbjct: 3194 IHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTIVNRKPALVHGLEDVHINRVACGSS 3253

Query: 468  HTL 470
            H++
Sbjct: 3254 HSI 3256



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 103/336 (30%), Positives = 144/336 (42%), Gaps = 56/336 (16%)

Query: 89   PEPFPLPTEASIVKAA--AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKD 146
            P P P  ++  I K A  +G  H +A+T  G+V++WG  E        G L  G  L+ D
Sbjct: 2970 PRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGE-------DGKLGHGNRLNLD 3022

Query: 147  VFERQSSFLTEQVSPRSQ-VSRSSGGTSSGTDGR-GSGEEGSKRRRISLAKQTAESSSSG 204
              +   +  ++++   +   S S+  TSSG     G GE G    R+            G
Sbjct: 3023 KPKMIEALRSKKIRDIACGSSHSAAITSSGELYTWGLGEYG----RLG----------HG 3068

Query: 205  DENLSAFPCLVTLNPGVRIATVAAGGR--HTLALSDIGQVWGWGYGGEGQLGLGSRIRMV 262
            D      P L+    G RI  VA G R   TLAL+D G V+ WG G  G+LG G      
Sbjct: 3069 DNITQLKPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGRGGS-EGC 3127

Query: 263  SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL 322
            + PH I         +R  AL                  V  I CG + S  +T  G + 
Sbjct: 3128 NIPHNI---------ERLNALE-----------------VVQIECGAQFSLALTKTGEVW 3161

Query: 323  TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFG 382
            T+G G Y + G GS      P  + SL   ++  VA G  H + ++  G VYA+G N  G
Sbjct: 3162 TWGKGDYFRLGHGSDQHVRKPTVIESLKDKKVIHVAVGALHCLAVTDTGQVYAWGDNDHG 3221

Query: 383  QLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
            Q G G       P L+    LE+VH   V+CG+ H+
Sbjct: 3222 QQGNGTTIVNRKPALVHG--LEDVHINRVACGSSHS 3255



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 106/239 (44%), Gaps = 39/239 (16%)

Query: 212  PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP-- 269
            P L+    G  I  +A GG H+ A++  GQ++ WG G  G+LG G     +  P  I   
Sbjct: 4000 PKLIEALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRYGRLGHGDSEDQLK-PKLIEEL 4058

Query: 270  ------------------CIES-----SYGKDRSAALSRGSVNSEGPGFRVPGNY----- 301
                              CI       S+G      L RG  +    G +VP        
Sbjct: 4059 VGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSD----GCKVPKKIESLAG 4114

Query: 302  --VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAA 359
              V  + CG + S  +T +G++ T+G G Y + G G+ +    P  V++L G +I  +A 
Sbjct: 4115 LGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGTGEHVRRPKKVAALQGKKIISIAT 4174

Query: 360  GLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
            G  H +  S +G+V+ +G N  GQLG     A   PRL+ A  L+     +V+CG+ HT
Sbjct: 4175 GSLHCVACSDEGEVFTWGDNDEGQLGDDTTNAIQRPRLVSA--LQGKKITNVACGSAHT 4231



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 69/232 (29%), Positives = 110/232 (47%), Gaps = 38/232 (16%)

Query: 240  GQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRV 297
            G ++GWG+   GQLG   G+++++     P PC                    E      
Sbjct: 3870 GTIYGWGHNHRGQLGGIEGAKVKI-----PTPC--------------------EALSTLR 3904

Query: 298  PGNYVKGIACGGRHSAV-ITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG 356
            P   V     GG  +   +T  G +   G+G  G+ G G TD  L P  + S+  + I+ 
Sbjct: 3905 PVQLV-----GGEQTLFAVTADGKVYATGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKK 3959

Query: 357  VA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
            +A  +G  H + +S+D DVY++G    G+LG G   A   P+L++A  L+      ++CG
Sbjct: 3960 IAVNSGGKHCLALSADNDVYSWGEGDDGKLGHGNRLACETPKLIEA--LQGYEIIDIACG 4017

Query: 415  ARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
              H+A I   G+++ WG  +YG+LG GD  D+  P  +  + G    +VACG
Sbjct: 4018 GAHSAAITSTGQLYTWGKGRYGRLGHGDSEDQLKPKLIEELVGYKVIDVACG 4069



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 87/164 (53%), Gaps = 5/164 (3%)

Query: 305  IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA--AGLW 362
            IA G +   +++  G L   G G  G+ G G +++   P  +  L    I+ VA  +G  
Sbjct: 2932 IAGGSKSLFIVSHEGKLYACGEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGK 2991

Query: 363  HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIA 422
            H + ++ DG V+++G  + G+LG G       P++++A  L +   + ++CG+ H+A I 
Sbjct: 2992 HAMALTLDGKVFSWGEGEDGKLGHGNRLNLDKPKMIEA--LRSKKIRDIACGSSHSAAIT 3049

Query: 423  DDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
              G+++ WG  +YG+LG GD I +  P  + ++ G     VACG
Sbjct: 3050 SSGELYTWGLGEYGRLGHGDNITQLKPKLIKSLVGHRIVQVACG 3093



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 104/250 (41%), Gaps = 29/250 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS------ 257
           GD +    P L+    G  I  V  GG ++ A+S  G ++ WG G  G+LG G+      
Sbjct: 550 GDTSTKEEPTLIQALKGKDIIDVECGGTYSAAISANGALYTWGRGNYGRLGHGTAEDCLT 609

Query: 258 --RIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPG-------------------FR 296
              I  +S  H I     S+        S+G V S G G                    +
Sbjct: 610 PTMISALSDEHIIKVACGSFYAHTLCITSQGKVYSWGDGDYGKLGRGGSDGSKLPRLIEK 669

Query: 297 VPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG 356
           +    +  + CG + S  +++ G + T+G G   + G  + ++   P  V  L   ++ G
Sbjct: 670 LQNVKIVQVYCGAQFSVALSEDGHVYTWGKGEGWKLGHPTEENVRFPEMVEVLRDRKVVG 729

Query: 357 VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR 416
           V+ G+ H + ++  G+VY +G N+  Q+    +     PRL++A  L+      V CG  
Sbjct: 730 VSLGVSHVLALTDQGEVYGWGKNENKQICDSSELFVQQPRLIEA--LKGQKVVGVCCGPA 787

Query: 417 HTAVIADDGK 426
            +    DD +
Sbjct: 788 QSFAWTDDNE 797



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 69/135 (51%), Gaps = 4/135 (2%)

Query: 309 GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICIS 368
           G+H   +T    + ++G G  G+ G G T  +  P  + +L G  I  V  G  ++  IS
Sbjct: 524 GKHYLALTKDYEVYSWGNGDGGRLGHGDTSTKEEPTLIQALKGKDIIDVECGGTYSAAIS 583

Query: 369 SDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGA--RHTAVIADDGK 426
           ++G +Y +G   +G+LG G  +    P ++ A S E  H   V+CG+   HT  I   GK
Sbjct: 584 ANGALYTWGRGNYGRLGHGTAEDCLTPTMISALSDE--HIIKVACGSFYAHTLCITSQGK 641

Query: 427 VFCWGWNKYGQLGLG 441
           V+ WG   YG+LG G
Sbjct: 642 VYSWGDGDYGKLGRG 656



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 21/176 (11%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           +K I C  R   ++T  G +    +    QC          P  ++ L GI +  +AA  
Sbjct: 473 IKQICCSDRTILILTQTGKVFFMYYSSDTQC----------PQEMTGLSGINMIKIAAHP 522

Query: 362 --WHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
              H + ++ D +VY++G    G+LG G    +  P L+ A  L+      V CG  ++A
Sbjct: 523 EGKHYLALTKDYEVYSWGNGDGGRLGHGDTSTKEEPTLIQA--LKGKDIIDVECGGTYSA 580

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI---EGCVPRNVACG--WWHTL 470
            I+ +G ++ WG   YG+LG G   D   P+ ++    E  +   VACG  + HTL
Sbjct: 581 AISANGALYTWGRGNYGRLGHGTAEDCLTPTMISALSDEHII--KVACGSFYAHTL 634



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 83/195 (42%), Gaps = 27/195 (13%)

Query: 204  GDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLG----- 256
            GD      P L+    G ++  VA  +G   TL ++D   VW WG G  G+LG G     
Sbjct: 4044 GDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGC 4103

Query: 257  SRIRMVSSPHPIPCIESSYGKDRSAALSR-GSVNSEGPG------------FRVP----- 298
               + + S   +  I+   G   S AL+R GSV + G G             R P     
Sbjct: 4104 KVPKKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGTGEHVRRPKKVAA 4163

Query: 299  --GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG 356
              G  +  IA G  H    +D G + T+G    GQ G  +T+    P  VS+L G +I  
Sbjct: 4164 LQGKKIISIATGSLHCVACSDEGEVFTWGDNDEGQLGDDTTNAIQRPRLVSALQGKKITN 4223

Query: 357  VAAGLWHTICISSDG 371
            VA G  HT+  S++ 
Sbjct: 4224 VACGSAHTLAWSTNN 4238



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 4/125 (3%)

Query: 346  VSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLEN 405
            +S L  I I G +  L+    +S +G +YA G    G+LG G       PR +   S   
Sbjct: 2924 LSQLWPIHIAGGSKSLF---IVSHEGKLYACGEGTNGRLGLGHSNNVPYPRPIPFLSQYV 2980

Query: 406  VHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVAC 464
            +   +V  G +H   +  DGKVF WG  + G+LG G+ ++ + P  +  +     R++AC
Sbjct: 2981 IKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLNLDKPKMIEALRSKKIRDIAC 3040

Query: 465  GWWHT 469
            G  H+
Sbjct: 3041 GSSHS 3045



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 102/231 (44%), Gaps = 27/231 (11%)

Query: 47  RDVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +D+    CG  ++ AIS +  L TWG   + G+    + +    P      ++  I+K A
Sbjct: 567 KDIIDVECGGTYSAAISANGALYTWGR-GNYGRLGHGTAEDCLTPTMISALSDEHIIKVA 625

Query: 105 AG--WAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPR 162
            G  +AH + +T  G+VY+WG  +    GR   D   G+ L + + E+  +    QV   
Sbjct: 626 CGSFYAHTLCITSQGKVYSWGDGDYGKLGRGGSD---GSKLPR-LIEKLQNVKIVQVYCG 681

Query: 163 SQVSRS-SGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGV 221
           +Q S + S      T G+G G +        L   T E+          FP +V +    
Sbjct: 682 AQFSVALSEDGHVYTWGKGEGWK--------LGHPTEENVR--------FPEMVEVLRDR 725

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIE 272
           ++  V+ G  H LAL+D G+V+GWG     Q+   S +  V  P  I  ++
Sbjct: 726 KVVGVSLGVSHVLALTDQGEVYGWGKNENKQICDSSEL-FVQQPRLIEALK 775



 Score = 43.5 bits (101), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 77/152 (50%), Gaps = 9/152 (5%)

Query: 324  FGWGL--YGQCG--QGSTDDELSP-NCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            +GWG    GQ G  +G+     +P   +S+L  +Q+ G    L+    +++DG VYA G 
Sbjct: 3873 YGWGHNHRGQLGGIEGAKVKIPTPCEALSTLRPVQLVGGEQTLF---AVTADGKVYATGY 3929

Query: 379  NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
               G+LG GG  +  +P LL++     +   +V+ G +H   ++ D  V+ WG    G+L
Sbjct: 3930 GAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGDDGKL 3989

Query: 439  GLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            G G+ +    P  +  ++G    ++ACG  H+
Sbjct: 3990 GHGNRLACETPKLIEALQGYEIIDIACGGAHS 4021


>gi|300798276|ref|NP_001179573.1| probable E3 ubiquitin-protein ligase HERC6 [Bos taurus]
          Length = 1016

 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 88/262 (33%), Positives = 125/262 (47%), Gaps = 34/262 (12%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P L TLN    +A V+ G  H+LA+   G+V+ WG   EGQLG+G        P  I  +
Sbjct: 70  PALETLN----VALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTL 125

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
                                      G  +  +ACG  HS  +++ G + ++G   +GQ
Sbjct: 126 --------------------------AGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQ 159

Query: 332 CGQGST-DDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            G G     + SP  V SL GI +  VAAG  H+  +S  G  + +G N  GQL   G+ 
Sbjct: 160 LGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNN 219

Query: 391 AETLP-RLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIP 449
           A     + +   +L+ +   S+SCG +HTAV+  DGKVF +G N YGQLG     ++  P
Sbjct: 220 APVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGP 279

Query: 450 SQVT-IEGCVPRNVACGWWHTL 470
             V  IEG V + + CG  HTL
Sbjct: 280 QLVERIEGLVSQ-IDCGSDHTL 300



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 95/347 (27%), Positives = 142/347 (40%), Gaps = 65/347 (18%)

Query: 47  RDVCGGGCGFAMAIS---DSRKLITWGSTDDLGQSYVTSGK-------HGEIPEPFPLPT 96
           R VC GG     A S    S  L++ G+    G +  + G+        GE PE  P   
Sbjct: 16  RQVCAGGNTLLQAASGEHHSLLLLSDGTVQSCGDN--SRGQLGRKGTPRGEQPERIPALE 73

Query: 97  EASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRV-FGDLSTGTGLDKDVFERQSSFL 155
             ++   + G  H +AV   G V+ WG       G++  G+    T + K + +  +   
Sbjct: 74  TLNVALVSCGKEHSLAVCHKGRVFAWG---AASEGQLGIGEFKETTFIPKKI-KTLAGIK 129

Query: 156 TEQVS--PRSQVSRSSGGT--SSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAF 211
             QV+      V+ S  G   S GT+  G         ++ L K+    +S         
Sbjct: 130 IIQVACGHYHSVALSEDGQVFSWGTNSHG---------QLGLGKEFPSQAS--------- 171

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P  V    G+ +A VAAGG H+ ALS  G  +GWG    GQL L      V    P+   
Sbjct: 172 PQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPV--- 228

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
                       S G++ + G         V  I+CG +H+AV+T  G + TFG   YGQ
Sbjct: 229 ------------SIGALKTLG---------VVSISCGYKHTAVLTQDGKVFTFGDNSYGQ 267

Query: 332 CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFG 377
            G   T ++  P  V  + G+ +  +  G  HT+  I + G V +FG
Sbjct: 268 LGHDPTAEKRGPQLVERIEGL-VSQIDCGSDHTLAYIYTTGQVVSFG 313


>gi|297598338|ref|NP_001045419.2| Os01g0952300 [Oryza sativa Japonica Group]
 gi|255674079|dbj|BAF07333.2| Os01g0952300 [Oryza sativa Japonica Group]
          Length = 1133

 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 65/171 (38%), Positives = 100/171 (58%), Gaps = 4/171 (2%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ I+CGGRH+A++T  G + ++G    G+ G G   D   P  + SL  + IE VA G 
Sbjct: 313 VQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACGE 372

Query: 362 WHTICISSDGDVYAFGGN--QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
           +HT  ++  GD+Y +G    +FG LG G D +  +P+ +D P LE +H  S+SCG  HTA
Sbjct: 373 YHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGP-LEGIHVSSISCGPWHTA 431

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
           ++   G++F +G   +G LG GD    ++P +V +++G      ACG WHT
Sbjct: 432 LVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGVWHT 482



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/268 (27%), Positives = 119/268 (44%), Gaps = 42/268 (15%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G+ +++++ G  HT  ++  GQ++ +G G  G LG G R  + S P  +  ++       
Sbjct: 417 GIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASL-SVPREVESLK------- 468

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDA------------GALLTFGWG 327
                         G R     V+  ACG  H+A + +             G + T+G G
Sbjct: 469 --------------GLRT----VRA-ACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDG 509

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG 387
             G+ G G  D    P CV++L+      VA G   T+ +++ G VY  G   +GQLG  
Sbjct: 510 DKGRLGHGDKDSRFVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGN- 568

Query: 388 GDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
             QA+ L  +     L     + +SCGA H AV+    +V+ WG    G+LG G   D+N
Sbjct: 569 -PQADGLLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGGTDDKN 627

Query: 448 IPSQV-TIEGCVPRNVACGWWHTLLLAV 474
            P+ V  ++    R+V CG   T  + +
Sbjct: 628 TPTLVEALKDKQVRSVVCGINFTAAICI 655



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 82/281 (29%), Positives = 122/281 (43%), Gaps = 49/281 (17%)

Query: 210 AFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYG--GEGQLGLGSRIRMVSSPHP 267
           A P L+     + I  VA G  HT A++  G ++ WG G    G LG G+ +      H 
Sbjct: 352 AQPKLIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDV-----SHW 406

Query: 268 IPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWG 327
           +P                     +GP   + G +V  I+CG  H+A++T AG L TFG G
Sbjct: 407 VP------------------KRVDGP---LEGIHVSSISCGPWHTALVTSAGQLFTFGDG 445

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI------------SSDGDVYA 375
            +G  G G       P  V SL G++    A G+WHT  +             S G ++ 
Sbjct: 446 SFGVLGHGDRASLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFT 505

Query: 376 FGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKY 435
           +G    G+LG G   +  +P  + A  L   +   V+CG   T  +   G V+  G   Y
Sbjct: 506 WGDGDKGRLGHGDKDSRFVPTCVAA--LVEPNFCQVACGHCLTVALTTSGHVYTMGSAVY 563

Query: 436 GQLGLGDVIDRNIPSQVTIEGCVPRN----VACGWWHTLLL 472
           GQLG     D  +P  V +EG + +N    ++CG +H  +L
Sbjct: 564 GQLG-NPQADGLLP--VRVEGKLHKNFVEEISCGAYHVAVL 601



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 75/138 (54%), Gaps = 6/138 (4%)

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D L P  +   + + ++ ++ G  H   ++  G++Y++G    G+LG G D     P+L+
Sbjct: 298 DYLVPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLI 357

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCW--GWNKYGQLGLGDVIDRNIPSQVT--I 454
           D  SL +++ + V+CG  HT  +   G ++ W  G  K+G LG G+ +   +P +V   +
Sbjct: 358 D--SLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPL 415

Query: 455 EGCVPRNVACGWWHTLLL 472
           EG    +++CG WHT L+
Sbjct: 416 EGIHVSSISCGPWHTALV 433


>gi|222619882|gb|EEE56014.1| hypothetical protein OsJ_04782 [Oryza sativa Japonica Group]
          Length = 1093

 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 65/171 (38%), Positives = 100/171 (58%), Gaps = 4/171 (2%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ I+CGGRH+A++T  G + ++G    G+ G G   D   P  + SL  + IE VA G 
Sbjct: 313 VQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACGE 372

Query: 362 WHTICISSDGDVYAFGGN--QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
           +HT  ++  GD+Y +G    +FG LG G D +  +P+ +D P LE +H  S+SCG  HTA
Sbjct: 373 YHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGP-LEGIHVSSISCGPWHTA 431

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
           ++   G++F +G   +G LG GD    ++P +V +++G      ACG WHT
Sbjct: 432 LVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGVWHT 482



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/268 (27%), Positives = 119/268 (44%), Gaps = 42/268 (15%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G+ +++++ G  HT  ++  GQ++ +G G  G LG G R  + S P  +  ++       
Sbjct: 417 GIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASL-SVPREVESLK------- 468

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDA------------GALLTFGWG 327
                         G R     V+  ACG  H+A + +             G + T+G G
Sbjct: 469 --------------GLRT----VRA-ACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDG 509

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG 387
             G+ G G  D    P CV++L+      VA G   T+ +++ G VY  G   +GQLG  
Sbjct: 510 DKGRLGHGDKDSRFVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGN- 568

Query: 388 GDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
             QA+ L  +     L     + +SCGA H AV+    +V+ WG    G+LG G   D+N
Sbjct: 569 -PQADGLLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGGTDDKN 627

Query: 448 IPSQV-TIEGCVPRNVACGWWHTLLLAV 474
            P+ V  ++    R+V CG   T  + +
Sbjct: 628 TPTLVEALKDKQVRSVVCGINFTAAICI 655



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 82/281 (29%), Positives = 122/281 (43%), Gaps = 49/281 (17%)

Query: 210 AFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYG--GEGQLGLGSRIRMVSSPHP 267
           A P L+     + I  VA G  HT A++  G ++ WG G    G LG G+ +      H 
Sbjct: 352 AQPKLIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDV-----SHW 406

Query: 268 IPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWG 327
           +P                     +GP   + G +V  I+CG  H+A++T AG L TFG G
Sbjct: 407 VP------------------KRVDGP---LEGIHVSSISCGPWHTALVTSAGQLFTFGDG 445

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI------------SSDGDVYA 375
            +G  G G       P  V SL G++    A G+WHT  +             S G ++ 
Sbjct: 446 SFGVLGHGDRASLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFT 505

Query: 376 FGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKY 435
           +G    G+LG G   +  +P  + A  L   +   V+CG   T  +   G V+  G   Y
Sbjct: 506 WGDGDKGRLGHGDKDSRFVPTCVAA--LVEPNFCQVACGHCLTVALTTSGHVYTMGSAVY 563

Query: 436 GQLGLGDVIDRNIPSQVTIEGCVPRN----VACGWWHTLLL 472
           GQLG     D  +P  V +EG + +N    ++CG +H  +L
Sbjct: 564 GQLG-NPQADGLLP--VRVEGKLHKNFVEEISCGAYHVAVL 601



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 75/138 (54%), Gaps = 6/138 (4%)

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D L P  +   + + ++ ++ G  H   ++  G++Y++G    G+LG G D     P+L+
Sbjct: 298 DYLVPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLI 357

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCW--GWNKYGQLGLGDVIDRNIPSQVT--I 454
           D  SL +++ + V+CG  HT  +   G ++ W  G  K+G LG G+ +   +P +V   +
Sbjct: 358 D--SLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPL 415

Query: 455 EGCVPRNVACGWWHTLLL 472
           EG    +++CG WHT L+
Sbjct: 416 EGIHVSSISCGPWHTALV 433


>gi|296486675|tpg|DAA28788.1| TPA: hect domain and RLD 6-like isoform 1 [Bos taurus]
          Length = 980

 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 88/262 (33%), Positives = 125/262 (47%), Gaps = 34/262 (12%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P L TLN    +A V+ G  H+LA+   G+V+ WG   EGQLG+G        P  I  +
Sbjct: 70  PALETLN----VALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTL 125

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
                                      G  +  +ACG  HS  +++ G + ++G   +GQ
Sbjct: 126 --------------------------AGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQ 159

Query: 332 CGQGST-DDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            G G     + SP  V SL GI +  VAAG  H+  +S  G  + +G N  GQL   G+ 
Sbjct: 160 LGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNN 219

Query: 391 AETLP-RLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIP 449
           A     + +   +L+ +   S+SCG +HTAV+  DGKVF +G N YGQLG     ++  P
Sbjct: 220 APVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGP 279

Query: 450 SQVT-IEGCVPRNVACGWWHTL 470
             V  IEG V + + CG  HTL
Sbjct: 280 QLVERIEGLVSQ-IDCGSDHTL 300



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 95/347 (27%), Positives = 142/347 (40%), Gaps = 65/347 (18%)

Query: 47  RDVCGGGCGFAMAIS---DSRKLITWGSTDDLGQSYVTSGK-------HGEIPEPFPLPT 96
           R VC GG     A S    S  L++ G+    G +  + G+        GE PE  P   
Sbjct: 16  RQVCAGGNTLLQAASGEHHSLLLLSDGTVQSCGDN--SRGQLGRKGTPRGEQPERIPALE 73

Query: 97  EASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRV-FGDLSTGTGLDKDVFERQSSFL 155
             ++   + G  H +AV   G V+ WG       G++  G+    T + K + +  +   
Sbjct: 74  TLNVALVSCGKEHSLAVCHKGRVFAWG---AASEGQLGIGEFKETTFIPKKI-KTLAGIK 129

Query: 156 TEQVS--PRSQVSRSSGGT--SSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAF 211
             QV+      V+ S  G   S GT+  G         ++ L K+    +S         
Sbjct: 130 IIQVACGHYHSVALSEDGQVFSWGTNSHG---------QLGLGKEFPSQAS--------- 171

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P  V    G+ +A VAAGG H+ ALS  G  +GWG    GQL L      V    P+   
Sbjct: 172 PQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPV--- 228

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
                       S G++ + G         V  I+CG +H+AV+T  G + TFG   YGQ
Sbjct: 229 ------------SIGALKTLG---------VVSISCGYKHTAVLTQDGKVFTFGDNSYGQ 267

Query: 332 CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFG 377
            G   T ++  P  V  + G+ +  +  G  HT+  I + G V +FG
Sbjct: 268 LGHDPTAEKRGPQLVERIEGL-VSQIDCGSDHTLAYIYTTGQVVSFG 313


>gi|218189748|gb|EEC72175.1| hypothetical protein OsI_05225 [Oryza sativa Indica Group]
          Length = 1093

 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 65/171 (38%), Positives = 100/171 (58%), Gaps = 4/171 (2%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ I+CGGRH+A++T  G + ++G    G+ G G   D   P  + SL  + IE VA G 
Sbjct: 313 VQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACGE 372

Query: 362 WHTICISSDGDVYAFGGN--QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
           +HT  ++  GD+Y +G    +FG LG G D +  +P+ +D P LE +H  S+SCG  HTA
Sbjct: 373 YHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGP-LEGIHVSSISCGPWHTA 431

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
           ++   G++F +G   +G LG GD    ++P +V +++G      ACG WHT
Sbjct: 432 LVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGVWHT 482



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/268 (27%), Positives = 119/268 (44%), Gaps = 42/268 (15%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G+ +++++ G  HT  ++  GQ++ +G G  G LG G R  + S P  +  ++       
Sbjct: 417 GIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASL-SVPREVESLK------- 468

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDA------------GALLTFGWG 327
                         G R     V+  ACG  H+A + +             G + T+G G
Sbjct: 469 --------------GLRT----VRA-ACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDG 509

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG 387
             G+ G G  D    P CV++L+      VA G   T+ +++ G VY  G   +GQLG  
Sbjct: 510 DKGRLGHGDKDSRFVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGN- 568

Query: 388 GDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
             QA+ L  +     L     + +SCGA H AV+    +V+ WG    G+LG G   D+N
Sbjct: 569 -PQADGLLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGGTDDKN 627

Query: 448 IPSQV-TIEGCVPRNVACGWWHTLLLAV 474
            P+ V  ++    R+V CG   T  + +
Sbjct: 628 TPTLVEALKDKQVRSVVCGINFTAAICI 655



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 82/281 (29%), Positives = 122/281 (43%), Gaps = 49/281 (17%)

Query: 210 AFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYG--GEGQLGLGSRIRMVSSPHP 267
           A P L+     + I  VA G  HT A++  G ++ WG G    G LG G+ +      H 
Sbjct: 352 AQPKLIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDV-----SHW 406

Query: 268 IPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWG 327
           +P                     +GP   + G +V  I+CG  H+A++T AG L TFG G
Sbjct: 407 VP------------------KRVDGP---LEGIHVSSISCGPWHTALVTSAGQLFTFGDG 445

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI------------SSDGDVYA 375
            +G  G G       P  V SL G++    A G+WHT  +             S G ++ 
Sbjct: 446 SFGVLGHGDRASLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFT 505

Query: 376 FGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKY 435
           +G    G+LG G   +  +P  + A  L   +   V+CG   T  +   G V+  G   Y
Sbjct: 506 WGDGDKGRLGHGDKDSRFVPTCVAA--LVEPNFCQVACGHCLTVALTTSGHVYTMGSAVY 563

Query: 436 GQLGLGDVIDRNIPSQVTIEGCVPRN----VACGWWHTLLL 472
           GQLG     D  +P  V +EG + +N    ++CG +H  +L
Sbjct: 564 GQLG-NPQADGLLP--VRVEGKLHKNFVEEISCGAYHVAVL 601



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 75/138 (54%), Gaps = 6/138 (4%)

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D L P  +   + + ++ ++ G  H   ++  G++Y++G    G+LG G D     P+L+
Sbjct: 298 DYLVPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLI 357

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCW--GWNKYGQLGLGDVIDRNIPSQVT--I 454
           D  SL +++ + V+CG  HT  +   G ++ W  G  K+G LG G+ +   +P +V   +
Sbjct: 358 D--SLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPL 415

Query: 455 EGCVPRNVACGWWHTLLL 472
           EG    +++CG WHT L+
Sbjct: 416 EGIHVSSISCGPWHTALV 433


>gi|356568831|ref|XP_003552611.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Glycine max]
          Length = 474

 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 122/405 (30%), Positives = 172/405 (42%), Gaps = 65/405 (16%)

Query: 89  PEPFPLP--TEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKD 146
           PE F  P  T A  +  A G  H  A+   G ++TWG  +       FG L  GT   + 
Sbjct: 49  PELFGCPAGTNARWLDVACGREHTAAIASDGSLFTWGAND-------FGQLGDGTEERRK 101

Query: 147 VFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGS-KRRRISLAKQTAESSSSGD 205
           + E+     +E V      S S G   S         +G+   RR+ +  Q   S+    
Sbjct: 102 LPEKVKQLESEFVK-----SVSCGAHCSACIAEPHENDGTISTRRLWVWGQNQGSN---- 152

Query: 206 ENLSAFPCLV--TLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
                 P L      P   I  V+ G  H +ALS+ G +  WGY   GQLG G     + 
Sbjct: 153 -----LPRLFWGAFKPNTIIREVSCGAVHVVALSEEGLLQAWGYNEYGQLGRGVTCEGLQ 207

Query: 264 SPHPIPCIESSYGK--DRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
                 CI SSY K  D +  L +                +  ++CG  H+AVI+D G +
Sbjct: 208 GA----CIISSYAKFLDEAPELVK----------------IAKVSCGEYHTAVISDKGEV 247

Query: 322 LTFGWGLYGQCGQGST---DDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            T+G G  GQ G  S    D EL P  V +L GI I+ VA G  HT  ++  G +YA+GG
Sbjct: 248 YTWGLGNMGQLGHSSLQYGDKELLPRRVVTLDGIFIKDVACGGVHTCSVTQGGALYAWGG 307

Query: 379 NQFGQLGTG---------GDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFC 429
            + GQLG G          + ++T  R +    +     + V+CG  HT +   DG++  
Sbjct: 308 GRSGQLGLGPQTGLFSCVANDSQTFFRNIPVLVVPK-GVQLVACGYSHTLISMSDGRIHG 366

Query: 430 WGWNKYGQLGLGDVIDRNIPSQVTIEGCV--PRNVACGWWHTLLL 472
           WG+N YGQ           PS   I+ CV   R +A G  H+ +L
Sbjct: 367 WGYNNYGQAANEKCTYAWYPS--PIDWCVGEVRKLAAGGGHSAVL 409



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 85/286 (29%), Positives = 129/286 (45%), Gaps = 71/286 (24%)

Query: 242 VWGWGYGGEGQLGLGSRIRMVSSPHPIP-----C--------IESSYGKDRSAAL-SRGS 287
           ++ WGY   GQ G   +   +  P  +P     C        ++ + G++ +AA+ S GS
Sbjct: 21  IYVWGYNQSGQTGRKGKEDQLRIPKQLPPELFGCPAGTNARWLDVACGREHTAAIASDGS 80

Query: 288 VNSEGPG-------------------FRVPGNYVKGIACGGRHSAVITDA----GALLTF 324
           + + G                      ++   +VK ++CG   SA I +     G + T 
Sbjct: 81  LFTWGANDFGQLGDGTEERRKLPEKVKQLESEFVKSVSCGAHCSACIAEPHENDGTISTR 140

Query: 325 GWGLYGQCGQGSTDDEL-----SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN 379
              ++GQ  QGS    L      PN +       I  V+ G  H + +S +G + A+G N
Sbjct: 141 RLWVWGQ-NQGSNLPRLFWGAFKPNTI-------IREVSCGAVHVVALSEEGLLQAWGYN 192

Query: 380 QFGQLGTG----GDQAETL----PRLLD-APSLENVHSKSVSCGARHTAVIADDGKVFCW 430
           ++GQLG G    G Q   +     + LD AP L  V    VSCG  HTAVI+D G+V+ W
Sbjct: 193 EYGQLGRGVTCEGLQGACIISSYAKFLDEAPEL--VKIAKVSCGEYHTAVISDKGEVYTW 250

Query: 431 GWNKYGQLG-----LGD--VIDRNIPSQVTIEGCVPRNVACGWWHT 469
           G    GQLG      GD  ++ R +   VT++G   ++VACG  HT
Sbjct: 251 GLGNMGQLGHSSLQYGDKELLPRRV---VTLDGIFIKDVACGGVHT 293



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 7/110 (6%)

Query: 373 VYAFGGNQFGQLGTGGDQAETL------PRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           +Y +G NQ GQ G  G + +        P L   P+  N     V+CG  HTA IA DG 
Sbjct: 21  IYVWGYNQSGQTGRKGKEDQLRIPKQLPPELFGCPAGTNARWLDVACGREHTAAIASDGS 80

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLAVP 475
           +F WG N +GQLG G    R +P +V  +E    ++V+CG   +  +A P
Sbjct: 81  LFTWGANDFGQLGDGTEERRKLPEKVKQLESEFVKSVSCGAHCSACIAEP 130


>gi|426344976|ref|XP_004039179.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Gorilla gorilla gorilla]
          Length = 1016

 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 127/269 (47%), Gaps = 33/269 (12%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI------PCIESSY 275
           +I  +  G  H+LALS  G+++ WG    GQLG+G +    ++P  +      P  + S 
Sbjct: 139 KIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISA 198

Query: 276 GKDRSAALS---------RGSVNSEGPGFRVPGNY-----------VKGIACGGRHSAVI 315
           G+  S ALS         +      G G     +Y           V+ +ACGG HSA++
Sbjct: 199 GEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEGLDNQKVEFVACGGSHSALL 258

Query: 316 TDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD-GDVY 374
           T  G L TFG G +GQ G  ST +EL P  V+ L+G ++  +A G WHT+   SD G V+
Sbjct: 259 TQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVF 318

Query: 375 AFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNK 434
           +FG  + GQLG GG + + +P  +   S E +  +S +       +   +  +  W   +
Sbjct: 319 SFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWIKKE 378

Query: 435 YGQLGLGDVIDRNIPSQVTIEGCVPRNVA 463
              + L     R IP+    EG V R +A
Sbjct: 379 NSYVNL----KRTIPT--LNEGTVKRWIA 401



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 59/168 (35%), Positives = 93/168 (55%), Gaps = 4/168 (2%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDELSPNCVSSLLGIQIEGVAAGLWH 363
           I CG  HS  ++  G L  +G  L+GQ G G       +P  V  L G+ +  ++AG  H
Sbjct: 143 ITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAH 202

Query: 364 TICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
           ++ +S  G++Y++G N+FGQLG G  +++  P L++   L+N   + V+CG  H+A++  
Sbjct: 203 SMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEG--LDNQKVEFVACGGSHSALLTQ 260

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
           DG +F +G  K+GQLG     +   P  V  + G     +ACG WHTL
Sbjct: 261 DGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTL 308



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 99/229 (43%), Gaps = 57/229 (24%)

Query: 57  AMAISDSRKLITWGSTDDLGQSYVTSGKHGE--IPEPFPLPTEASIV---------KAAA 105
           ++A+S   +L  WG              HG+  +   FP  T   IV         + +A
Sbjct: 150 SLALSKGGELFAWGQ-----------NLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISA 198

Query: 106 GWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQV 165
           G AH +A++  G +Y+WG  E       FG L  G    KD        L E +  +   
Sbjct: 199 GEAHSMALSMSGNIYSWGKNE-------FGQLGLGHTESKDY-----PSLIEGLDNQKVE 246

Query: 166 SRSSGGTSSG---TDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLN 218
             + GG+ S     DG     G+G+ G          Q   +S+  +      PCLV   
Sbjct: 247 FVACGGSHSALLTQDGLLFTFGAGKHG----------QLGHNSTQNELR----PCLVAEL 292

Query: 219 PGVRIATVAAGGRHTLA-LSDIGQVWGWGYGGEGQLGL-GSRIRMVSSP 265
            G R+  +A G  HTLA +SD+G+V+ +G G +GQLG  G+R +++  P
Sbjct: 293 VGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLP 341



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 100/250 (40%), Gaps = 50/250 (20%)

Query: 97  EASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLT 156
           E  I++   G  H +A+++GGE++ WG            +L    G+ +      +  + 
Sbjct: 137 EKKIIQITCGDYHSLALSKGGELFAWG-----------QNLHGQLGVGRKFPSTTTPQIV 185

Query: 157 EQVS--PRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCL 214
           E ++  P +Q+S    G +       SG         S  K        G      +P L
Sbjct: 186 EHLAGVPLAQIS---AGEAHSMALSMSG------NIYSWGKNEFGQLGLGHTESKDYPSL 236

Query: 215 VTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESS 274
           +      ++  VA GG H+  L+  G ++ +G G  GQLG  S     +     PC+   
Sbjct: 237 IEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNS-----TQNELRPCLV-- 289

Query: 275 YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHS-AVITDAGALLTFGWGLYGQCG 333
                          +E  G+RV       IACG  H+ A ++D G + +FG G  GQ G
Sbjct: 290 ---------------AELVGYRVT-----QIACGRWHTLAYVSDLGKVFSFGSGKDGQLG 329

Query: 334 QGSTDDELSP 343
            G T D+L P
Sbjct: 330 NGGTRDQLMP 339



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 73/175 (41%), Gaps = 45/175 (25%)

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSD------------------------------- 370
           +P C+     ++I  V  G  H + +SSD                               
Sbjct: 87  TPKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEYDNYSMKHLRFENVLQEKKIIQITCG 146

Query: 371 ----------GDVYAFGGNQFGQLGTGGD-QAETLPRLLDAPSLENVHSKSVSCGARHTA 419
                     G+++A+G N  GQLG G    + T P++++   L  V    +S G  H+ 
Sbjct: 147 DYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVE--HLAGVPLAQISAGEAHSM 204

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLA 473
            ++  G ++ WG N++GQLGLG    ++ PS +  ++      VACG  H+ LL 
Sbjct: 205 ALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEGLDNQKVEFVACGGSHSALLT 259


>gi|57899942|dbj|BAD87854.1| putative ZR1 protein [Oryza sativa Japonica Group]
          Length = 1091

 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 65/171 (38%), Positives = 100/171 (58%), Gaps = 4/171 (2%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ I+CGGRH+A++T  G + ++G    G+ G G   D   P  + SL  + IE VA G 
Sbjct: 313 VQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACGE 372

Query: 362 WHTICISSDGDVYAFGGN--QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
           +HT  ++  GD+Y +G    +FG LG G D +  +P+ +D P LE +H  S+SCG  HTA
Sbjct: 373 YHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGP-LEGIHVSSISCGPWHTA 431

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
           ++   G++F +G   +G LG GD    ++P +V +++G      ACG WHT
Sbjct: 432 LVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGVWHT 482



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/268 (27%), Positives = 119/268 (44%), Gaps = 42/268 (15%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G+ +++++ G  HT  ++  GQ++ +G G  G LG G R  + S P  +  ++       
Sbjct: 417 GIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASL-SVPREVESLK------- 468

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDA------------GALLTFGWG 327
                         G R     V+  ACG  H+A + +             G + T+G G
Sbjct: 469 --------------GLRT----VRA-ACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDG 509

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG 387
             G+ G G  D    P CV++L+      VA G   T+ +++ G VY  G   +GQLG  
Sbjct: 510 DKGRLGHGDKDSRFVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGN- 568

Query: 388 GDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
             QA+ L  +     L     + +SCGA H AV+    +V+ WG    G+LG G   D+N
Sbjct: 569 -PQADGLLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGGTDDKN 627

Query: 448 IPSQV-TIEGCVPRNVACGWWHTLLLAV 474
            P+ V  ++    R+V CG   T  + +
Sbjct: 628 TPTLVEALKDKQVRSVVCGINFTAAICI 655



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 82/281 (29%), Positives = 122/281 (43%), Gaps = 49/281 (17%)

Query: 210 AFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYG--GEGQLGLGSRIRMVSSPHP 267
           A P L+     + I  VA G  HT A++  G ++ WG G    G LG G+ +      H 
Sbjct: 352 AQPKLIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDV-----SHW 406

Query: 268 IPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWG 327
           +P                     +GP   + G +V  I+CG  H+A++T AG L TFG G
Sbjct: 407 VP------------------KRVDGP---LEGIHVSSISCGPWHTALVTSAGQLFTFGDG 445

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI------------SSDGDVYA 375
            +G  G G       P  V SL G++    A G+WHT  +             S G ++ 
Sbjct: 446 SFGVLGHGDRASLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFT 505

Query: 376 FGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKY 435
           +G    G+LG G   +  +P  + A  L   +   V+CG   T  +   G V+  G   Y
Sbjct: 506 WGDGDKGRLGHGDKDSRFVPTCVAA--LVEPNFCQVACGHCLTVALTTSGHVYTMGSAVY 563

Query: 436 GQLGLGDVIDRNIPSQVTIEGCVPRN----VACGWWHTLLL 472
           GQLG     D  +P  V +EG + +N    ++CG +H  +L
Sbjct: 564 GQLG-NPQADGLLP--VRVEGKLHKNFVEEISCGAYHVAVL 601



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 75/138 (54%), Gaps = 6/138 (4%)

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D L P  +   + + ++ ++ G  H   ++  G++Y++G    G+LG G D     P+L+
Sbjct: 298 DYLVPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLI 357

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCW--GWNKYGQLGLGDVIDRNIPSQVT--I 454
           D  SL +++ + V+CG  HT  +   G ++ W  G  K+G LG G+ +   +P +V   +
Sbjct: 358 D--SLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPL 415

Query: 455 EGCVPRNVACGWWHTLLL 472
           EG    +++CG WHT L+
Sbjct: 416 EGIHVSSISCGPWHTALV 433


>gi|296486676|tpg|DAA28789.1| TPA: hect domain and RLD 6-like isoform 2 [Bos taurus]
          Length = 1016

 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 88/262 (33%), Positives = 125/262 (47%), Gaps = 34/262 (12%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P L TLN    +A V+ G  H+LA+   G+V+ WG   EGQLG+G        P  I  +
Sbjct: 70  PALETLN----VALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTL 125

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
                                      G  +  +ACG  HS  +++ G + ++G   +GQ
Sbjct: 126 --------------------------AGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQ 159

Query: 332 CGQGST-DDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            G G     + SP  V SL GI +  VAAG  H+  +S  G  + +G N  GQL   G+ 
Sbjct: 160 LGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNN 219

Query: 391 AETLP-RLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIP 449
           A     + +   +L+ +   S+SCG +HTAV+  DGKVF +G N YGQLG     ++  P
Sbjct: 220 APVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGP 279

Query: 450 SQVT-IEGCVPRNVACGWWHTL 470
             V  IEG V + + CG  HTL
Sbjct: 280 QLVERIEGLVSQ-IDCGSDHTL 300



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 95/347 (27%), Positives = 142/347 (40%), Gaps = 65/347 (18%)

Query: 47  RDVCGGGCGFAMAIS---DSRKLITWGSTDDLGQSYVTSGK-------HGEIPEPFPLPT 96
           R VC GG     A S    S  L++ G+    G +  + G+        GE PE  P   
Sbjct: 16  RQVCAGGNTLLQAASGEHHSLLLLSDGTVQSCGDN--SRGQLGRKGTPRGEQPERIPALE 73

Query: 97  EASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRV-FGDLSTGTGLDKDVFERQSSFL 155
             ++   + G  H +AV   G V+ WG       G++  G+    T + K + +  +   
Sbjct: 74  TLNVALVSCGKEHSLAVCHKGRVFAWG---AASEGQLGIGEFKETTFIPKKI-KTLAGIK 129

Query: 156 TEQVS--PRSQVSRSSGGT--SSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAF 211
             QV+      V+ S  G   S GT+  G         ++ L K+    +S         
Sbjct: 130 IIQVACGHYHSVALSEDGQVFSWGTNSHG---------QLGLGKEFPSQAS--------- 171

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P  V    G+ +A VAAGG H+ ALS  G  +GWG    GQL L      V    P+   
Sbjct: 172 PQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPV--- 228

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
                       S G++ + G         V  I+CG +H+AV+T  G + TFG   YGQ
Sbjct: 229 ------------SIGALKTLG---------VVSISCGYKHTAVLTQDGKVFTFGDNSYGQ 267

Query: 332 CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFG 377
            G   T ++  P  V  + G+ +  +  G  HT+  I + G V +FG
Sbjct: 268 LGHDPTAEKRGPQLVERIEGL-VSQIDCGSDHTLAYIYTTGQVVSFG 313


>gi|156406658|ref|XP_001641162.1| predicted protein [Nematostella vectensis]
 gi|156228299|gb|EDO49099.1| predicted protein [Nematostella vectensis]
          Length = 596

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 98/283 (34%), Positives = 140/283 (49%), Gaps = 43/283 (15%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
           G++   A P +V    G  I  VA G  HTLALS  G+V+ WG G  G+LG G  +R   
Sbjct: 223 GEDTQEAHPHVVEALLGKDIRKVACGATHTLALSKDGEVFSWGSGYGGRLGQG-HLRDRF 281

Query: 264 SPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVI---TDAGA 320
           +P  I  +E              S+N            +  +AC   HSA +   +  GA
Sbjct: 282 TPIRICGLE--------------SLN------------LTQVACNEFHSAAVCACSKQGA 315

Query: 321 LLTFGWGLYGQCGQGSTDDELSPN---CVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
           L +FG   YGQ   G  +D+L  +   CVSSL   +I  VA G +H+  ++  G ++ +G
Sbjct: 316 LFSFGENDYGQL--GIPEDKLLTSYIQCVSSLSEHKISRVACGSFHSAALAEHGSLWLWG 373

Query: 378 GNQFGQLGTGGDQAETLPRLLDA-PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYG 436
            N+ GQLG G   + +LP LL+A   L +     V+CG +H+A I   G++FC G N YG
Sbjct: 374 CNESGQLGNGNYTSTSLPSLLEAGNDLRHDAVMEVACGDQHSAFITKKGRMFCCGDNTYG 433

Query: 437 QLG--LGDVIDRNIPSQVTIEGCVPRN-----VACGWWHTLLL 472
           QLG  L D  D ++   V +   VP +     VACG  HT ++
Sbjct: 434 QLGAHLNDNQDDHVTYNVAVRVRVPTDFRCVHVACGDSHTAVV 476



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 55/167 (32%), Positives = 86/167 (51%), Gaps = 11/167 (6%)

Query: 314 VITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDV 373
           V  DA  + T+G G  G  G G    E  P+ V +LLG  I  VA G  HT+ +S DG+V
Sbjct: 202 VKEDACDIYTWGEGTNGMLGHGEDTQEAHPHVVEALLGKDIRKVACGATHTLALSKDGEV 261

Query: 374 YAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI---ADDGKVFCW 430
           +++G    G+LG G  +    P  +    LE+++   V+C   H+A +   +  G +F +
Sbjct: 262 FSWGSGYGGRLGQGHLRDRFTP--IRICGLESLNLTQVACNEFHSAAVCACSKQGALFSF 319

Query: 431 GWNKYGQLGLGDVIDRNIPSQVTIEGCVPRN----VACGWWHTLLLA 473
           G N YGQLG+ +  D+ + S +     +  +    VACG +H+  LA
Sbjct: 320 GENDYGQLGIPE--DKLLTSYIQCVSSLSEHKISRVACGSFHSAALA 364



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 101/372 (27%), Positives = 151/372 (40%), Gaps = 63/372 (16%)

Query: 62  DSRKLITWGSTDD--LGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEV 119
           D+  + TWG   +  LG    T   H  + E         I K A G  H +A+++ GEV
Sbjct: 205 DACDIYTWGEGTNGMLGHGEDTQEAHPHVVEAL---LGKDIRKVACGATHTLALSKDGEV 261

Query: 120 YTWGWKECVPSGRVFGDLSTGTGLDKDVFE------RQSSFLTEQVSPRSQVSRSSGGTS 173
           ++WG       GR+      G G  +D F        +S  LT QV+     S +    S
Sbjct: 262 FSWGSGY---GGRL------GQGHLRDRFTPIRICGLESLNLT-QVACNEFHSAAVCACS 311

Query: 174 SGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHT 233
                   GE    +  I   K             S   C+ +L+   +I+ VA G  H+
Sbjct: 312 KQGALFSFGENDYGQLGIPEDKLLT----------SYIQCVSSLSEH-KISRVACGSFHS 360

Query: 234 LALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGP 293
            AL++ G +W WG    GQLG G+     S+  P                   S+   G 
Sbjct: 361 AALAEHGSLWLWGCNESGQLGNGN---YTSTSLP-------------------SLLEAGN 398

Query: 294 GFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCG---QGSTDDELSPNCVSSL- 349
             R   + V  +ACG +HSA IT  G +   G   YGQ G     + DD ++ N    + 
Sbjct: 399 DLR--HDAVMEVACGDQHSAFITKKGRMFCCGDNTYGQLGAHLNDNQDDHVTYNVAVRVR 456

Query: 350 --LGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVH 407
                +   VA G  HT  ++  G+++ +G  + G+LG G +    LP  ++   +E  H
Sbjct: 457 VPTDFRCVHVACGDSHTAVVTDGGEIFTWGRGKGGRLGHGDNLNRHLPTEIEI-GMEGKH 515

Query: 408 SKSVSCGARHTA 419
            + VSCG  HTA
Sbjct: 516 VRGVSCGRAHTA 527


>gi|149043901|gb|EDL97352.1| rCG61079, isoform CRA_a [Rattus norvegicus]
          Length = 546

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 84/268 (31%), Positives = 116/268 (43%), Gaps = 30/268 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
           G E     P  V       I  V+ G  HTLAL+D GQV+ WG   +GQLGL      + 
Sbjct: 67  GHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIR 126

Query: 264 SPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLT 323
            P  I  +                              +  +ACG  HS  ++ A  +  
Sbjct: 127 VPRNIKSLSDIQ--------------------------IVQVACGYYHSLALSKASEVFC 160

Query: 324 FGWGLYGQCGQG-STDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFG 382
           +G   YGQ G G     + SP  + SLLGI    VAAG  H+  ++  G ++ +G N+FG
Sbjct: 161 WGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220

Query: 383 QLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGD 442
           QLG   +    +P LL   SL +     + CG  HTA +  +G VF +G   YGQLG   
Sbjct: 221 QLGLNDENDRYVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 443 VIDRNIPSQV-TIEGCVPRNVACGWWHT 469
                 P +V  + G +   +ACG  HT
Sbjct: 279 TSHEINPRKVFELMGSIVTQIACGRQHT 306



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLG-TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VFCWG NKYGQLGLG    +    Q+  ++ G     VA G  H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   YGQ G G  D+E  L P      +  ++  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQLG   +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 439 GLGDV-----IDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALS 153



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 76/303 (25%), Positives = 121/303 (39%), Gaps = 48/303 (15%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D       S +   +P      ++  IV+ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++  EV+ WG  +       +G L  G    K    + S  L + +     
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK-------YGQLGLGIECQK----QTSPQLIKSLLGIPF 192

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           +  ++GG  S          G  R +              DEN    P L+      +I 
Sbjct: 193 MQVAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRSQKIV 245

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +                
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 288

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                     F + G+ V  IACG +H SA +  +G + +FG G  GQ G GST +  SP
Sbjct: 289 ----------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 344 NCV 346
             V
Sbjct: 339 FTV 341


>gi|328870950|gb|EGG19322.1| regulator of chromosome condensation domain-containing protein
            [Dictyostelium fasciculatum]
          Length = 2003

 Score =  117 bits (294), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 109/424 (25%), Positives = 182/424 (42%), Gaps = 72/424 (16%)

Query: 54   CGF--AMAISDSRKLITWG--STDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAH 109
            CG+  A  I+   +L TWG  ++  LG   + +GKH   P       +  I+  + G  H
Sbjct: 1201 CGWEHAAVITVDGELFTWGNNTSGQLGHG-LAAGKHQSTPMRVESLKQTPIMMMSLGGEH 1259

Query: 110  CVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSS 169
             V +     +Y+WG      +G+ +G L  G     ++ +R   F  +++S  +     +
Sbjct: 1260 TVVIDRSFHIYSWG------NGK-YGQLGHGVSTPHNLPKRIEEFAGQKISSIATGYWHT 1312

Query: 170  GGTSSGTD--GRGSGEEGS-------KRRRISLAKQTAESSSSGDENLSAFPCLVTLNPG 220
                SG D    GS E G            I     TA+   +G                
Sbjct: 1313 LVLRSGGDLFAFGSNEHGQLGLNDLKHHLPIPTRVNTADIHHAGQP-------------- 1358

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
             R+  +  G  H++  +  G V+ +G   +GQLG GS              ES     R 
Sbjct: 1359 TRVTGIFCGHSHSVLRTSHGDVYSFGANAKGQLGHGS-------------TESC----RY 1401

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
              L +G          + G  +K I CG  H+ V TD  ++  +G G +   G GS  +E
Sbjct: 1402 PKLIQG----------LKGKNIKRITCGPYHTVVTTDLDSVYCWGQGEHMCLGTGSNKNE 1451

Query: 341  LSPNCVSSLLGIQIEGVAAGLWHTICIS-------SDGDVYAFGGNQFGQLGTGGD-QAE 392
            L P  V   +  ++E V  GL+HT  ++       + G+VY  G ++ G+LG GGD ++ 
Sbjct: 1452 LVPKLVELFVNKRVERVVCGLYHTATLTQPMGDSNTGGNVYICGSSEHGKLGIGGDPRSP 1511

Query: 393  TLPRLLDA--PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
            +L +   A  PS+ + +   ++ GA   A+I  +G ++ WG   +GQ+G G   D  IP+
Sbjct: 1512 SLDKAYPAIIPSINSANVVDLASGAEFNALITSNGALYMWGAGTHGQIGNGKNQDTWIPT 1571

Query: 451  QVTI 454
            +V++
Sbjct: 1572 RVSL 1575



 Score =  111 bits (278), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 100/398 (25%), Positives = 146/398 (36%), Gaps = 116/398 (29%)

Query: 93   PLPT----EASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVF 148
            P+P     E      + GW H   +T  GE++TWG                         
Sbjct: 1185 PMPALRFNEKHAKSVSCGWEHAAVITVDGELFTWG------------------------- 1219

Query: 149  ERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRG--SGEEGSKRRRISLAKQTAESSSSGDE 206
                                    +SG  G G  +G+  S   R+   KQT         
Sbjct: 1220 ----------------------NNTSGQLGHGLAAGKHQSTPMRVESLKQTP-------- 1249

Query: 207  NLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPH 266
                            I  ++ GG HT+ +     ++ WG G  GQLG G     VS+PH
Sbjct: 1250 ----------------IMMMSLGGEHTVVIDRSFHIYSWGNGKYGQLGHG-----VSTPH 1288

Query: 267  PIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGW 326
             +P     +                       G  +  IA G  H+ V+   G L  FG 
Sbjct: 1289 NLPKRIEEFA----------------------GQKISSIATGYWHTLVLRSGGDLFAFGS 1326

Query: 327  GLYGQCGQGSTDDELS-PNCVSSL------LGIQIEGVAAGLWHTICISSDGDVYAFGGN 379
              +GQ G       L  P  V++          ++ G+  G  H++  +S GDVY+FG N
Sbjct: 1327 NEHGQLGLNDLKHHLPIPTRVNTADIHHAGQPTRVTGIFCGHSHSVLRTSHGDVYSFGAN 1386

Query: 380  QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG 439
              GQLG G  ++   P+L+     +N+  K ++CG  HT V  D   V+CWG  ++  LG
Sbjct: 1387 AKGQLGHGSTESCRYPKLIQGLKGKNI--KRITCGPYHTVVTTDLDSVYCWGQGEHMCLG 1444

Query: 440  LGDVIDRNIPSQVT--IEGCVPRNVACGWWHTLLLAVP 475
             G   +  +P  V   +   V R V CG +HT  L  P
Sbjct: 1445 TGSNKNELVPKLVELFVNKRVER-VVCGLYHTATLTQP 1481


>gi|296220559|ref|XP_002756357.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Callithrix jacchus]
          Length = 979

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 113/249 (45%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +           
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQ------- 138

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDEL 341
                              +  +ACG  HS  ++ A  +  +G   YGQ G G+    + 
Sbjct: 139 -------------------IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQT 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  + SLLGI    VAAG  H+  ++  G ++ +G N+FGQLG   +    +P LL   
Sbjct: 180 SPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK-- 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL +     + CG  HTA +  +G VF +G   YGQLG         P +V  + G +  
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297

Query: 461 NVACGWWHT 469
            +ACG  HT
Sbjct: 298 QIACGRQHT 306



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/235 (32%), Positives = 109/235 (46%), Gaps = 33/235 (14%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++I  VA G  H+LALS   +V+ WG    GQLGLG+  +  +SP     I+S  G    
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQ---LIKSLLG---- 189

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTD 338
                           +P      +A GG HS V+T +GA+  FGWG   +GQ G    +
Sbjct: 190 ----------------IP---FMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDEN 228

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D   PN + SL   +I  +  G  HT  ++ +G V+ FG   +GQLG      E  PR  
Sbjct: 229 DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR-- 286

Query: 399 DAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
               L       ++CG +HT A +   G+++ +G    GQLG G   +R  P  V
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  VQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLGT-GGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VFCWG NKYGQLGLG    +    Q+  ++ G     VA G  H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 83/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      +  +++ V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 439 GL-----GDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALS 153



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 77/304 (25%), Positives = 124/304 (40%), Gaps = 48/304 (15%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D     + S +   +P      ++  IV+ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++  EV+ WG  +       +G L  GT    D  ++ S  L + +     
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK-------YGQLGLGT----DCKKQTSPQLIKSLLGIPF 192

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           +  ++GG  S          G  R +              DEN    P L+      +I 
Sbjct: 193 MQVAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRSQKIV 245

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +                
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 288

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                     F + G+ V  IACG +H SA +  +G + +FG G  GQ G GST +  SP
Sbjct: 289 ----------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 344 NCVS 347
             V 
Sbjct: 339 FTVK 342


>gi|390472682|ref|XP_003734522.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Callithrix
           jacchus]
          Length = 1049

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 113/249 (45%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +           
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQ------- 138

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDEL 341
                              +  +ACG  HS  ++ A  +  +G   YGQ G G+    + 
Sbjct: 139 -------------------IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQT 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  + SLLGI    VAAG  H+  ++  G ++ +G N+FGQLG   +    +P LL   
Sbjct: 180 SPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK-- 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL +     + CG  HTA +  +G VF +G   YGQLG         P +V  + G +  
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297

Query: 461 NVACGWWHT 469
            +ACG  HT
Sbjct: 298 QIACGRQHT 306



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/235 (32%), Positives = 109/235 (46%), Gaps = 33/235 (14%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++I  VA G  H+LALS   +V+ WG    GQLGLG+  +  +SP     I+S  G    
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQ---LIKSLLG---- 189

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTD 338
                           +P      +A GG HS V+T +GA+  FGWG   +GQ G    +
Sbjct: 190 ----------------IP---FMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDEN 228

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D   PN + SL   +I  +  G  HT  ++ +G V+ FG   +GQLG      E  PR  
Sbjct: 229 DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR-- 286

Query: 399 DAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
               L       ++CG +HT A +   G+++ +G    GQLG G   +R  P  V
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  VQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLGT-GGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VFCWG NKYGQLGLG    +    Q+  ++ G     VA G  H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 83/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      +  +++ V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 439 GL-----GDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALS 153



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 77/304 (25%), Positives = 124/304 (40%), Gaps = 48/304 (15%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D     + S +   +P      ++  IV+ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++  EV+ WG  +       +G L  GT    D  ++ S  L + +     
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK-------YGQLGLGT----DCKKQTSPQLIKSLLGIPF 192

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           +  ++GG  S          G  R +              DEN    P L+      +I 
Sbjct: 193 MQVAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRSQKIV 245

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +                
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 288

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                     F + G+ V  IACG +H SA +  +G + +FG G  GQ G GST +  SP
Sbjct: 289 ----------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 344 NCVS 347
             V 
Sbjct: 339 FTVK 342


>gi|149043902|gb|EDL97353.1| rCG61079, isoform CRA_b [Rattus norvegicus]
          Length = 1049

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 112/249 (44%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +           
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQ------- 138

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDEL 341
                              +  +ACG  HS  ++ A  +  +G   YGQ G G     + 
Sbjct: 139 -------------------IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQT 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  + SLLGI    VAAG  H+  ++  G ++ +G N+FGQLG   +    +P LL   
Sbjct: 180 SPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK-- 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL +     + CG  HTA +  +G VF +G   YGQLG         P +V  + G +  
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297

Query: 461 NVACGWWHT 469
            +ACG  HT
Sbjct: 298 QIACGRQHT 306



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLG-TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VFCWG NKYGQLGLG    +    Q+  ++ G     VA G  H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   YGQ G G  D+E  L P      +  ++  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 439 GLG-----DVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALS 153



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 76/304 (25%), Positives = 121/304 (39%), Gaps = 48/304 (15%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D       S +   +P      ++  IV+ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++  EV+ WG  +       +G L  G    K    + S  L + +     
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK-------YGQLGLGIECQK----QTSPQLIKSLLGIPF 192

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           +  ++GG  S          G  R +              DEN    P L+      +I 
Sbjct: 193 MQVAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRSQKIV 245

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +                
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 288

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                     F + G+ V  IACG +H SA +  +G + +FG G  GQ G GST +  SP
Sbjct: 289 ----------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 344 NCVS 347
             V 
Sbjct: 339 FTVK 342


>gi|126649317|ref|XP_001388330.1| uvb-resistance protein uvr8 [Cryptosporidium parvum Iowa II]
 gi|32398856|emb|CAD98566.1| uvb-resistance protein uvr8, possible [Cryptosporidium parvum]
 gi|126117424|gb|EAZ51524.1| uvb-resistance protein uvr8, putative [Cryptosporidium parvum Iowa
           II]
          Length = 487

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/300 (30%), Positives = 145/300 (48%), Gaps = 33/300 (11%)

Query: 206 ENLSAFPCLVT-LNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR------ 258
           E +S  P LV  L     I+ V+ G  ++ A+++ G +  WGYGG GQLG G+       
Sbjct: 26  EEVSPGPHLVDGLRHLSSISKVSCGSNYSAAITNSGDLILWGYGGCGQLGFGNLEDCLVP 85

Query: 259 ---------IRMVSSPHPIPCIES-----SYGKDRSAALSRG------SVNSEGPGFRVP 298
                    I++  S      I S     ++G  ++  L  G      S N      +V 
Sbjct: 86  RVNLSLKNVIQVACSDRHTAAILSNGELYTWGCSKNGKLGHGQFELSISNNVVSQPMKVK 145

Query: 299 ---GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
              G  V  ++CG  H+  +TD    LT+G GL G+ G G T D  +P  + SL G+ I+
Sbjct: 146 ALEGEKVIQVSCGSYHTGCLTDDKKALTWGLGLQGRLGHGDTQDIFTPKLIESLAGLPIK 205

Query: 356 GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGA 415
            ++ G  HT  +   G +Y FGG  FG+LG G      +PRLL+ P LE++    VS G+
Sbjct: 206 EISCGGHHTAILLVTGKLYMFGGGAFGKLGFGSTDDVLIPRLLEGP-LEDIQITKVSLGS 264

Query: 416 RHTAVIADDGKVFCWGW-NKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLA 473
           +H+A +   GKV+ WG   + G +  G   D   P +++ +E     +++CG  H++ L+
Sbjct: 265 QHSAAVTKCGKVYTWGQGGRLGHIFNGPEHDFLSPKRLSNLEKAFIVDISCGNSHSVALS 324



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 114/416 (27%), Positives = 178/416 (42%), Gaps = 58/416 (13%)

Query: 66  LITWGSTDDLGQSYVTSGKHGEIPEPFP-----LPTEASIVKAAAGWAHCVAVTEGGEVY 120
           ++ WGST+     Y   G  GE   P P     L   +SI K + G  +  A+T  G++ 
Sbjct: 10  VVVWGSTE-----YGQHGSKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAITNSGDLI 64

Query: 121 TWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRG 180
            WG+  C   G  FG+L     L   V     + +    S R   +  S G         
Sbjct: 65  LWGYGGCGQLG--FGNLEDC--LVPRVNLSLKNVIQVACSDRHTAAILSNGELYTWGCSK 120

Query: 181 SGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIG 240
           +G+ G  +  +S++            N+ + P  V    G ++  V+ G  HT  L+D  
Sbjct: 121 NGKLGHGQFELSISN-----------NVVSQPMKVKALEGEKVIQVSCGSYHTGCLTDDK 169

Query: 241 QVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGN 300
           +   WG G +G+LG G   + + +P     IES                       + G 
Sbjct: 170 KALTWGLGLQGRLGHGD-TQDIFTP---KLIES-----------------------LAGL 202

Query: 301 YVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS-LLGIQIEGVAA 359
            +K I+CGG H+A++   G L  FG G +G+ G GSTDD L P  +   L  IQI  V+ 
Sbjct: 203 PIKEISCGGHHTAILLVTGKLYMFGGGAFGKLGFGSTDDVLIPRLLEGPLEDIQITKVSL 262

Query: 360 GLWHTICISSDGDVYAFG-GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
           G  H+  ++  G VY +G G + G +  G +     P+ L   +LE      +SCG  H+
Sbjct: 263 GSQHSAAVTKCGKVYTWGQGGRLGHIFNGPEHDFLSPKRL--SNLEKAFIVDISCGNSHS 320

Query: 419 AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACGWWHTLLLA 473
             ++D G ++ WG  K    G+   I  N+PS+  I +      V C   H++ L+
Sbjct: 321 VALSDVGDIYTWGMTKNIGHGIQG-IHPNMPSKHPILQNKNIVQVVCSSSHSIALS 375



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/200 (34%), Positives = 104/200 (52%), Gaps = 12/200 (6%)

Query: 284 SRGSVNSEGP----GFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDD 339
           S+G   S GP    G R   +  K ++CG  +SA IT++G L+ +G+G  GQ G G+ +D
Sbjct: 23  SKGEEVSPGPHLVDGLRHLSSISK-VSCGSNYSAAITNSGDLILWGYGGCGQLGFGNLED 81

Query: 340 ELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLD 399
            L P    SL  + I+ VA    HT  I S+G++Y +G ++ G+LG G  +      ++ 
Sbjct: 82  CLVPRVNLSLKNV-IQ-VACSDRHTAAILSNGELYTWGCSKNGKLGHGQFELSISNNVVS 139

Query: 400 AP----SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TI 454
            P    +LE      VSCG+ HT  + DD K   WG    G+LG GD  D   P  + ++
Sbjct: 140 QPMKVKALEGEKVIQVSCGSYHTGCLTDDKKALTWGLGLQGRLGHGDTQDIFTPKLIESL 199

Query: 455 EGCVPRNVACGWWHTLLLAV 474
            G   + ++CG  HT +L V
Sbjct: 200 AGLPIKEISCGGHHTAILLV 219



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 95/381 (24%), Positives = 155/381 (40%), Gaps = 56/381 (14%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
           G  ++ AI++S  LI WG     G   +  G   +   P    +  ++++ A    H  A
Sbjct: 50  GSNYSAAITNSGDLILWGYG---GCGQLGFGNLEDCLVPRVNLSLKNVIQVACSDRHTAA 106

Query: 113 VTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGT 172
           +   GE+YTWG   C  +G+  G       +  +V  +       +     QVS  S  T
Sbjct: 107 ILSNGELYTWG---CSKNGK-LGHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHT 162

Query: 173 SSGTDGR-----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVA 227
              TD +     G G +G    R+            GD      P L+    G+ I  ++
Sbjct: 163 GCLTDDKKALTWGLGLQG----RLG----------HGDTQDIFTPKLIESLAGLPIKEIS 208

Query: 228 AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGS 287
            GG HT  L   G+++ +G G  G+LG GS   ++     IP +                
Sbjct: 209 CGGHHTAILLVTGKLYMFGGGAFGKLGFGSTDDVL-----IPRL---------------- 247

Query: 288 VNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGW-GLYGQCGQGSTDDELSPNCV 346
              EGP   +    +  ++ G +HSA +T  G + T+G  G  G    G   D LSP  +
Sbjct: 248 --LEGP---LEDIQITKVSLGSQHSAAVTKCGKVYTWGQGGRLGHIFNGPEHDFLSPKRL 302

Query: 347 SSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENV 406
           S+L    I  ++ G  H++ +S  GD+Y +G  +    G  G     +P     P L+N 
Sbjct: 303 SNLEKAFIVDISCGNSHSVALSDVGDIYTWGMTKNIGHGIQGIHP-NMPS--KHPILQNK 359

Query: 407 HSKSVSCGARHTAVIADDGKV 427
           +   V C + H+  ++D G +
Sbjct: 360 NIVQVVCSSSHSIALSDIGAL 380


>gi|357620246|gb|EHJ72511.1| hypothetical protein KGM_11261 [Danaus plexippus]
          Length = 4305

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 88/262 (33%), Positives = 134/262 (51%), Gaps = 34/262 (12%)

Query: 212  PCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP 269
            P L+     V I  VA  +GG+H LALS  G+V+ WG G +G+LG G+R+          
Sbjct: 4027 PTLLASIQHVFITKVACNSGGKHCLALSADGEVYSWGEGEDGKLGHGNRV---------- 4076

Query: 270  CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
                SY  DR   ++  S           G  V  IACGG HSA +T  G + T+G G Y
Sbjct: 4077 ----SY--DRPKLITALS-----------GLEVVCIACGGAHSACLTARGRIYTWGKGRY 4119

Query: 330  GQCGQGSTDDELSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTG 387
            G+ G G ++D+L P  V +L   ++  VA  +G   T+CI+ D +V+++G   +G+LG G
Sbjct: 4120 GRLGHGDSEDQLIPKLVEALSSFRVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG 4179

Query: 388  GDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
            G +   LP  +D   L+ +    V CG++ +  +   G V+ WG   Y +LG G      
Sbjct: 4180 GSEGCKLPMRIDC--LKGLRVIKVECGSQFSVALCQCGSVYTWGKGDYHRLGHGSYEHVR 4237

Query: 448  IPSQVT-IEGCVPRNVACGWWH 468
             P +VT ++G +  ++A G  H
Sbjct: 4238 RPMRVTGMQGKMIVSIATGSLH 4259



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 83/255 (32%), Positives = 125/255 (49%), Gaps = 36/255 (14%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            VR   V +GG+H LAL+  G+V+ WG G +G+LG G+RI +  +P     IES       
Sbjct: 3144 VRRVAVHSGGKHALALTADGKVYSWGEGEDGKLGHGNRITL-EAPR---LIES------- 3192

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                            + G  V  IACG  HSA +T  G L T+G G YG+ G G  + +
Sbjct: 3193 ----------------LAGERVISIACGSAHSACVTARGHLYTWGLGEYGRLGHGDDNIQ 3236

Query: 341  LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V +L   ++  VA G     T+ +++ G V+++G   FG+LG GG     +P  +
Sbjct: 3237 LVPKMVEALANYRVIQVACGSRDAQTLALTACGKVFSWGDGDFGKLGRGGSDGCAIP--M 3294

Query: 399  DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCV 458
            +   L ++    V CGA+ +  +  DG+V+ WG   Y +LG G   D ++     +E   
Sbjct: 3295 NVERLNSLGVTQVECGAQFSLALTRDGEVWTWGKGDYFRLGHG--CDAHVRRPTLVEALR 3352

Query: 459  PR---NVACGWWHTL 470
             R   +VA G  H L
Sbjct: 3353 GRRVIHVAVGALHCL 3367



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 119/252 (47%), Gaps = 28/252 (11%)

Query: 242  VWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIE--SSYGKDRS--AALSRGSVNSEG--- 292
            V+GWG+   GQLG   G+++R  +  H +  +      G +++  A    G V + G   
Sbjct: 3953 VYGWGHNHRGQLGGVEGAKVRTPTPCHALAALNPVQLVGGEQTLFAVTPDGKVYATGYGA 4012

Query: 293  --------------PGF--RVPGNYVKGIAC--GGRHSAVITDAGALLTFGWGLYGQCGQ 334
                          P     +   ++  +AC  GG+H   ++  G + ++G G  G+ G 
Sbjct: 4013 GGRLGIGGIDSVSQPTLLASIQHVFITKVACNSGGKHCLALSADGEVYSWGEGEDGKLGH 4072

Query: 335  GSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL 394
            G+      P  +++L G+++  +A G  H+ C+++ G +Y +G  ++G+LG G  + + +
Sbjct: 4073 GNRVSYDRPKLITALSGLEVVCIACGGAHSACLTARGRIYTWGKGRYGRLGHGDSEDQLI 4132

Query: 395  PRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT- 453
            P+L++A S   V   +   G   T  I DD  V+ WG   YG+LG G      +P ++  
Sbjct: 4133 PKLVEALSSFRVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSEGCKLPMRIDC 4192

Query: 454  IEGCVPRNVACG 465
            ++G     V CG
Sbjct: 4193 LKGLRVIKVECG 4204



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 89/303 (29%), Positives = 120/303 (39%), Gaps = 50/303 (16%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V   +G  HC+A++  GEVY+WG  E        G L  G  +  D        L   +S
Sbjct: 4041 VACNSGGKHCLALSADGEVYSWGEGE-------DGKLGHGNRVSYD-----RPKLITALS 4088

Query: 161  PRSQVSRSSGGTSSG-TDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
                V  + GG  S     RG      K R   L          GD      P LV    
Sbjct: 4089 GLEVVCIACGGAHSACLTARGRIYTWGKGRYGRLGH--------GDSEDQLIPKLVEALS 4140

Query: 220  GVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
              R+  VA  +G   TL ++D   VW WG G  G+LG G        P  I C++     
Sbjct: 4141 SFRVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGS-EGCKLPMRIDCLK----- 4194

Query: 278  DRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST 337
                            G RV    +K + CG + S  +   G++ T+G G Y + G GS 
Sbjct: 4195 ----------------GLRV----IK-VECGSQFSVALCQCGSVYTWGKGDYHRLGHGSY 4233

Query: 338  DDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
            +    P  V+ + G  I  +A G  H +  +  G+VY +G N  GQLG G   A   PRL
Sbjct: 4234 EHVRRPMRVTGMQGKMIVSIATGSLHCVACTDTGEVYTWGDNDEGQLGDGTTLAAQRPRL 4293

Query: 398  LDA 400
            L A
Sbjct: 4294 LMA 4296



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 101/385 (26%), Positives = 149/385 (38%), Gaps = 76/385 (19%)

Query: 27   RSPILSPLVVRLPLTVGSAWRDV-CGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKH 85
            + P+ SP +        SA R V   GG      +S   KL   G   + G+  +    +
Sbjct: 3079 KVPVFSPAL--------SALRPVHIAGGSKTLFIVSHDGKLFACGEGTN-GRLGLGHSNN 3129

Query: 86   GEIPEPFPLPTEASIVKAA--AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGL 143
               P   P  +   + + A  +G  H +A+T  G+VY+WG  E        G L  G  +
Sbjct: 3130 VSTPRANPYLSHVLVRRVAVHSGGKHALALTADGKVYSWGEGE-------DGKLGHGNRI 3182

Query: 144  DKDVFERQSSFLTEQVSPRSQVSRSSGGTSSG-TDGRGS------GEEGSKRRRISLAKQ 196
              +      S   E+V     +S + G   S     RG       GE G           
Sbjct: 3183 TLEAPRLIESLAGERV-----ISIACGSAHSACVTARGHLYTWGLGEYGRL--------- 3228

Query: 197  TAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGR--HTLALSDIGQVWGWGYGGEGQLG 254
                   GD+N+   P +V      R+  VA G R   TLAL+  G+V+ WG G  G+LG
Sbjct: 3229 -----GHGDDNIQLVPKMVEALANYRVIQVACGSRDAQTLALTACGKVFSWGDGDFGKLG 3283

Query: 255  LGSRIRMVSSPHPIPCIESSYGKDRSAA-LSRGSVNSEGPGFRVPGNYVKGIACGGRHSA 313
             G                   G D  A  ++   +NS G         V  + CG + S 
Sbjct: 3284 RG-------------------GSDGCAIPMNVERLNSLG---------VTQVECGAQFSL 3315

Query: 314  VITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDV 373
             +T  G + T+G G Y + G G       P  V +L G ++  VA G  H + ++S+  V
Sbjct: 3316 ALTRDGEVWTWGKGDYFRLGHGCDAHVRRPTLVEALRGRRVIHVAVGALHCLAVTSENQV 3375

Query: 374  YAFGGNQFGQLGTGGDQAETLPRLL 398
            +A+G N  GQ G G       P L+
Sbjct: 3376 WAWGDNDHGQQGNGTTCVNRRPALV 3400



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 82/268 (30%), Positives = 120/268 (44%), Gaps = 52/268 (19%)

Query: 217 LNPGVRIATVA-----AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           L PG+   T+      + GRH L  S  G  W WG G +G+LG G       +P P+  +
Sbjct: 516 LVPGLESKTITQVSCHSLGRHYLCRSSCGGAWSWGIGEDGRLGHGDTAAR-DAPQPLHHL 574

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
            + +   R AA                     G+AC    SAVIT  GAL T+G G  G+
Sbjct: 575 -AHHEVVRVAA---------------------GLAC----SAVITSRGALYTWGRGAQGR 608

Query: 332 CGQGSTDDELSPNCVS-SLLGIQ-IEGVAAGLW---HTICISSDGDVYAFGGNQFGQLGT 386
            G G+ ++ L+P  VS +   I+ I  VA G W    T+C + +G V  FG    G+ GT
Sbjct: 609 LGHGTIENCLTPQPVSFNAHNIERIIDVALG-WGEGSTLCCTWEGAVQVFGE---GEAGT 664

Query: 387 GGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR 446
                   PR L A ++  V    V  G    A + D G+V+ WG     +LG G++   
Sbjct: 665 --------PRALSALAMFRV--TRVYTGEHWHAALTDGGQVYTWGKGDGYRLGHGNMEST 714

Query: 447 NIPSQV-TIEGCVPRNVACGWWHTLLLA 473
            IP  V  ++G    +++ G  H + L+
Sbjct: 715 KIPKLVEALQGIKIVDLSLGASHGIALS 742



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 82/187 (43%), Gaps = 32/187 (17%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  VAAG   +  ++  G ++ WG G +G+LG G+ I    +P P+     +  +    A
Sbjct: 579 VVRVAAGLACSAVITSRGALYTWGRGAQGRLGHGT-IENCLTPQPVSFNAHNIERIIDVA 637

Query: 283 LS-----------RGSVNSEGPG-------------FRVPGNYVKGIACGGRH-SAVITD 317
           L             G+V   G G             FRV   Y       G H  A +TD
Sbjct: 638 LGWGEGSTLCCTWEGAVQVFGEGEAGTPRALSALAMFRVTRVYT------GEHWHAALTD 691

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
            G + T+G G   + G G+ +    P  V +L GI+I  ++ G  H I +SS+G ++ +G
Sbjct: 692 GGQVYTWGKGDGYRLGHGNMESTKIPKLVEALQGIKIVDLSLGASHGIALSSEGVLFVWG 751

Query: 378 GNQFGQL 384
            ++  Q+
Sbjct: 752 THERTQI 758



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 77/172 (44%), Gaps = 23/172 (13%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           ++ IAC  + + ++T  GA+ T  +            D ++P+ V  L    I  V+   
Sbjct: 485 IQQIACAEKLALLLTHDGAVYTLPY------------DTMTPHLVPGLESKTITQVSCHS 532

Query: 362 W--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
              H +C SS G  +++G  + G+LG G   A   P+ L    L +     V+ G   +A
Sbjct: 533 LGRHYLCRSSCGGAWSWGIGEDGRLGHGDTAARDAPQPLH--HLAHHEVVRVAAGLACSA 590

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-----IEGCVPRNVACGW 466
           VI   G ++ WG    G+LG G + +   P  V+     IE  +  +VA GW
Sbjct: 591 VITSRGALYTWGRGAQGRLGHGTIENCLTPQPVSFNAHNIERII--DVALGW 640



 Score = 47.0 bits (110), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 7/155 (4%)

Query: 323  TFGWGL--YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
             +GWG    GQ G        +P    +L  +    +  G      ++ DG VYA G   
Sbjct: 3953 VYGWGHNHRGQLGGVEGAKVRTPTPCHALAALNPVQLVGGEQTLFAVTPDGKVYATGYGA 4012

Query: 381  FGQLGTGGDQAETLPRLLDAPSLENVHSKSVSC--GARHTAVIADDGKVFCWGWNKYGQL 438
             G+LG GG  + + P LL   S+++V    V+C  G +H   ++ DG+V+ WG  + G+L
Sbjct: 4013 GGRLGIGGIDSVSQPTLL--ASIQHVFITKVACNSGGKHCLALSADGEVYSWGEGEDGKL 4070

Query: 439  GLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
            G G+ +  + P  +T + G     +ACG  H+  L
Sbjct: 4071 GHGNRVSYDRPKLITALSGLEVVCIACGGAHSACL 4105


>gi|67623229|ref|XP_667897.1| uvb-resistance protein uvr8 [Cryptosporidium hominis TU502]
 gi|54659070|gb|EAL37667.1| uvb-resistance protein uvr8 [Cryptosporidium hominis]
          Length = 487

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 91/300 (30%), Positives = 146/300 (48%), Gaps = 33/300 (11%)

Query: 206 ENLSAFPCLVT-LNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS------- 257
           E +S  P LV  L     I+ V+ G  ++ A+++ G +  WGYGG GQLG G+       
Sbjct: 26  EEVSPGPHLVDGLRHLSSISKVSCGSNYSAAITNSGDLILWGYGGCGQLGFGNLEDCLVP 85

Query: 258 RIRM---------VSSPHPIPCIES----SYGKDRSAALSRG------SVNSEGPGFRVP 298
           R+ +          S  H    + +    ++G  ++  L  G      S N      +V 
Sbjct: 86  RVNLSLKNVVQVACSDRHTAAILSNGELYTWGCSKNGKLGHGQFELSISNNVVSQPMKVK 145

Query: 299 ---GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
              G  V  ++CG  H+  +TD    LT+G GL G+ G G T D  +P  + SL G+ I+
Sbjct: 146 ALEGEKVIQVSCGSYHTGCLTDDKKALTWGLGLQGRLGHGDTQDIFTPKLIESLAGLPIK 205

Query: 356 GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGA 415
            ++ G  HT  +   G +Y FGG  FG+LG G      +PRLL+ P LE++    VS G+
Sbjct: 206 EISCGGHHTAILLVTGKLYMFGGGAFGKLGFGSTDDVLIPRLLEGP-LEDIQITKVSLGS 264

Query: 416 RHTAVIADDGKVFCWGW-NKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLA 473
           +H+A +   GKV+ WG   + G +  G   D   P +++ +E     +++CG  H++ L+
Sbjct: 265 QHSAAVTKCGKVYTWGQGGRLGHIFNGPEHDFLSPKRLSNLEKAFIVDISCGNSHSVALS 324



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 113/416 (27%), Positives = 178/416 (42%), Gaps = 58/416 (13%)

Query: 66  LITWGSTDDLGQSYVTSGKHGEIPEPFP-----LPTEASIVKAAAGWAHCVAVTEGGEVY 120
           ++ WGS++     Y   G  GE   P P     L   +SI K + G  +  A+T  G++ 
Sbjct: 10  VVVWGSSE-----YGQHGSKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAITNSGDLI 64

Query: 121 TWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRG 180
            WG+  C   G  FG+L     L   V     + +    S R   +  S G         
Sbjct: 65  LWGYGGCGQLG--FGNLEDC--LVPRVNLSLKNVVQVACSDRHTAAILSNGELYTWGCSK 120

Query: 181 SGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIG 240
           +G+ G  +  +S++            N+ + P  V    G ++  V+ G  HT  L+D  
Sbjct: 121 NGKLGHGQFELSISN-----------NVVSQPMKVKALEGEKVIQVSCGSYHTGCLTDDK 169

Query: 241 QVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGN 300
           +   WG G +G+LG G   + + +P     IES                       + G 
Sbjct: 170 KALTWGLGLQGRLGHGD-TQDIFTP---KLIES-----------------------LAGL 202

Query: 301 YVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS-LLGIQIEGVAA 359
            +K I+CGG H+A++   G L  FG G +G+ G GSTDD L P  +   L  IQI  V+ 
Sbjct: 203 PIKEISCGGHHTAILLVTGKLYMFGGGAFGKLGFGSTDDVLIPRLLEGPLEDIQITKVSL 262

Query: 360 GLWHTICISSDGDVYAFG-GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
           G  H+  ++  G VY +G G + G +  G +     P+ L   +LE      +SCG  H+
Sbjct: 263 GSQHSAAVTKCGKVYTWGQGGRLGHIFNGPEHDFLSPKRLS--NLEKAFIVDISCGNSHS 320

Query: 419 AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACGWWHTLLLA 473
             ++D G ++ WG  K    G+   I  N+PS+  I +      V C   H++ L+
Sbjct: 321 VALSDVGDIYTWGMTKNIGHGIQG-IHPNMPSKHPILQNKNIVQVVCSSSHSIALS 375



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/200 (34%), Positives = 102/200 (51%), Gaps = 12/200 (6%)

Query: 284 SRGSVNSEGP----GFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDD 339
           S+G   S GP    G R   +  K ++CG  +SA IT++G L+ +G+G  GQ G G+ +D
Sbjct: 23  SKGEEVSPGPHLVDGLRHLSSISK-VSCGSNYSAAITNSGDLILWGYGGCGQLGFGNLED 81

Query: 340 ELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLD 399
            L P    SL    +  VA    HT  I S+G++Y +G ++ G+LG G  +      ++ 
Sbjct: 82  CLVPRVNLSLK--NVVQVACSDRHTAAILSNGELYTWGCSKNGKLGHGQFELSISNNVVS 139

Query: 400 AP----SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TI 454
            P    +LE      VSCG+ HT  + DD K   WG    G+LG GD  D   P  + ++
Sbjct: 140 QPMKVKALEGEKVIQVSCGSYHTGCLTDDKKALTWGLGLQGRLGHGDTQDIFTPKLIESL 199

Query: 455 EGCVPRNVACGWWHTLLLAV 474
            G   + ++CG  HT +L V
Sbjct: 200 AGLPIKEISCGGHHTAILLV 219



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 92/376 (24%), Positives = 152/376 (40%), Gaps = 46/376 (12%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
           G  ++ AI++S  LI WG     G   +  G   +   P    +  ++V+ A    H  A
Sbjct: 50  GSNYSAAITNSGDLILWGYG---GCGQLGFGNLEDCLVPRVNLSLKNVVQVACSDRHTAA 106

Query: 113 VTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGT 172
           +   GE+YTWG   C  +G+  G       +  +V  +       +     QVS  S  T
Sbjct: 107 ILSNGELYTWG---CSKNGK-LGHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHT 162

Query: 173 SSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRH 232
              TD          ++ ++           GD      P L+    G+ I  ++ GG H
Sbjct: 163 GCLTD---------DKKALTWGLGLQGRLGHGDTQDIFTPKLIESLAGLPIKEISCGGHH 213

Query: 233 TLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEG 292
           T  L   G+++ +G G  G+LG GS   ++     IP +                   EG
Sbjct: 214 TAILLVTGKLYMFGGGAFGKLGFGSTDDVL-----IPRL------------------LEG 250

Query: 293 PGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWG-LYGQCGQGSTDDELSPNCVSSLLG 351
           P   +    +  ++ G +HSA +T  G + T+G G   G    G   D LSP  +S+L  
Sbjct: 251 P---LEDIQITKVSLGSQHSAAVTKCGKVYTWGQGGRLGHIFNGPEHDFLSPKRLSNLEK 307

Query: 352 IQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSV 411
             I  ++ G  H++ +S  GD+Y +G  +    G  G     +P     P L+N +   V
Sbjct: 308 AFIVDISCGNSHSVALSDVGDIYTWGMTKNIGHGIQGIHP-NMPS--KHPILQNKNIVQV 364

Query: 412 SCGARHTAVIADDGKV 427
            C + H+  ++D G +
Sbjct: 365 VCSSSHSIALSDIGAL 380


>gi|149043903|gb|EDL97354.1| rCG61079, isoform CRA_c [Rattus norvegicus]
          Length = 928

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 112/249 (44%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +           
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQ------- 138

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDEL 341
                              +  +ACG  HS  ++ A  +  +G   YGQ G G     + 
Sbjct: 139 -------------------IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQT 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  + SLLGI    VAAG  H+  ++  G ++ +G N+FGQLG   +    +P LL   
Sbjct: 180 SPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLL--K 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL +     + CG  HTA +  +G VF +G   YGQLG         P +V  + G +  
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297

Query: 461 NVACGWWHT 469
            +ACG  HT
Sbjct: 298 QIACGRQHT 306



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLG-TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VFCWG NKYGQLGLG    +    Q+  ++ G     VA G  H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   YGQ G G  D+E  L P      +  ++  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 439 GLGDV-----IDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALS 153



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 76/304 (25%), Positives = 121/304 (39%), Gaps = 48/304 (15%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D       S +   +P      ++  IV+ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++  EV+ WG  +       +G L  G    K    + S  L + +     
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK-------YGQLGLGIECQK----QTSPQLIKSLLGIPF 192

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           +  ++GG  S          G  R +              DEN    P L+      +I 
Sbjct: 193 MQVAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRSQKIV 245

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +                
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 288

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                     F + G+ V  IACG +H SA +  +G + +FG G  GQ G GST +  SP
Sbjct: 289 ----------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 344 NCVS 347
             V 
Sbjct: 339 FTVK 342


>gi|58865718|ref|NP_001012074.1| probable E3 ubiquitin-protein ligase HERC4 [Rattus norvegicus]
 gi|81883244|sp|Q5PQN1.1|HERC4_RAT RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           4
 gi|56269464|gb|AAH87104.1| Hect domain and RLD 4 [Rattus norvegicus]
          Length = 1057

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 112/249 (44%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +           
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQ------- 138

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDEL 341
                              +  +ACG  HS  ++ A  +  +G   YGQ G G     + 
Sbjct: 139 -------------------IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQT 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  + SLLGI    VAAG  H+  ++  G ++ +G N+FGQLG   +    +P LL   
Sbjct: 180 SPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLL--K 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL +     + CG  HTA +  +G VF +G   YGQLG         P +V  + G +  
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297

Query: 461 NVACGWWHT 469
            +ACG  HT
Sbjct: 298 QIACGRQHT 306



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLG-TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VFCWG NKYGQLGLG    +    Q+  ++ G     VA G  H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   YGQ G G  D+E  L P      +  ++  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 439 GLGDV-----IDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALS 153



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 76/304 (25%), Positives = 121/304 (39%), Gaps = 48/304 (15%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D       S +   +P      ++  IV+ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++  EV+ WG  +       +G L  G    K    + S  L + +     
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK-------YGQLGLGIECQK----QTSPQLIKSLLGIPF 192

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           +  ++GG  S          G  R +              DEN    P L+      +I 
Sbjct: 193 MQVAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRSQKIV 245

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +                
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 288

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                     F + G+ V  IACG +H SA +  +G + +FG G  GQ G GST +  SP
Sbjct: 289 ----------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 344 NCVS 347
             V 
Sbjct: 339 FTVK 342


>gi|296220557|ref|XP_002756356.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Callithrix jacchus]
          Length = 1057

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 113/249 (45%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +           
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQ------- 138

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDEL 341
                              +  +ACG  HS  ++ A  +  +G   YGQ G G+    + 
Sbjct: 139 -------------------IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQT 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  + SLLGI    VAAG  H+  ++  G ++ +G N+FGQLG   +    +P LL   
Sbjct: 180 SPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK-- 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL +     + CG  HTA +  +G VF +G   YGQLG         P +V  + G +  
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297

Query: 461 NVACGWWHT 469
            +ACG  HT
Sbjct: 298 QIACGRQHT 306



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/235 (32%), Positives = 109/235 (46%), Gaps = 33/235 (14%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++I  VA G  H+LALS   +V+ WG    GQLGLG+  +  +SP     I+S  G    
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQ---LIKSLLG---- 189

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTD 338
                           +P      +A GG HS V+T +GA+  FGWG   +GQ G    +
Sbjct: 190 ----------------IP---FMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDEN 228

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D   PN + SL   +I  +  G  HT  ++ +G V+ FG   +GQLG      E  PR  
Sbjct: 229 DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR-- 286

Query: 399 DAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
               L       ++CG +HT A +   G+++ +G    GQLG G   +R  P  V
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  VQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLGT-GGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VFCWG NKYGQLGLG    +    Q+  ++ G     VA G  H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 83/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      +  +++ V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 439 GL-----GDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALS 153



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 77/304 (25%), Positives = 124/304 (40%), Gaps = 48/304 (15%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D     + S +   +P      ++  IV+ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++  EV+ WG  +       +G L  GT    D  ++ S  L + +     
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK-------YGQLGLGT----DCKKQTSPQLIKSLLGIPF 192

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           +  ++GG  S          G  R +              DEN    P L+      +I 
Sbjct: 193 MQVAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRSQKIV 245

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +                
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 288

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                     F + G+ V  IACG +H SA +  +G + +FG G  GQ G GST +  SP
Sbjct: 289 ----------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 344 NCVS 347
             V 
Sbjct: 339 FTVK 342


>gi|402880679|ref|XP_003903925.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Papio anubis]
          Length = 979

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 113/249 (45%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +           
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQ------- 138

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDEL 341
                              +  +ACG  HS  ++ A  +  +G   YGQ G G+    + 
Sbjct: 139 -------------------IIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQT 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  + SLLGI    VAAG  H+  ++  G ++ +G N+FGQLG   +    +P LL   
Sbjct: 180 SPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK-- 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL +     + CG  HTA +  +G VF +G   YGQLG         P +V  + G +  
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297

Query: 461 NVACGWWHT 469
            +ACG  HT
Sbjct: 298 QIACGRQHT 306



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/235 (32%), Positives = 109/235 (46%), Gaps = 33/235 (14%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++I  VA G  H+LALS   +V+ WG    GQLGLG+  +  +SP     I+S  G    
Sbjct: 137 IQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQ---LIKSLLG---- 189

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTD 338
                           +P      +A GG HS V+T +GA+  FGWG   +GQ G    +
Sbjct: 190 ----------------IP---FMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDEN 228

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D   PN + SL   +I  +  G  HT  ++ +G V+ FG   +GQLG      E  PR  
Sbjct: 229 DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR-- 286

Query: 399 DAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
               L       ++CG +HT A +   G+++ +G    GQLG G   +R  P  V
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLGT-GGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPR--NIKSLSDIQIIQVACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VFCWG NKYGQLGLG    +    Q+  ++ G     VA G  H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      +  ++  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 439 GL-----GDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQII---QVACGYYHSLALS 153



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 76/304 (25%), Positives = 124/304 (40%), Gaps = 48/304 (15%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D     + S +   +P      ++  I++ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++  EV+ WG  +       +G L  GT    D  ++ S  L + +     
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK-------YGQLGLGT----DCKKQTSPQLIKSLLGIPF 192

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           +  ++GG  S          G  R +              DEN    P L+      +I 
Sbjct: 193 MQVAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRSQKIV 245

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +                
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 288

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                     F + G+ V  IACG +H SA +  +G + +FG G  GQ G GST +  SP
Sbjct: 289 ----------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 344 NCVS 347
             V 
Sbjct: 339 FTVK 342


>gi|402880675|ref|XP_003903923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Papio anubis]
          Length = 1049

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 113/249 (45%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +           
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQ------- 138

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDEL 341
                              +  +ACG  HS  ++ A  +  +G   YGQ G G+    + 
Sbjct: 139 -------------------IIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQT 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  + SLLGI    VAAG  H+  ++  G ++ +G N+FGQLG   +    +P LL   
Sbjct: 180 SPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK-- 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL +     + CG  HTA +  +G VF +G   YGQLG         P +V  + G +  
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297

Query: 461 NVACGWWHT 469
            +ACG  HT
Sbjct: 298 QIACGRQHT 306



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/235 (32%), Positives = 109/235 (46%), Gaps = 33/235 (14%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++I  VA G  H+LALS   +V+ WG    GQLGLG+  +  +SP     I+S  G    
Sbjct: 137 IQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQ---LIKSLLG---- 189

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTD 338
                           +P      +A GG HS V+T +GA+  FGWG   +GQ G    +
Sbjct: 190 ----------------IP---FMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDEN 228

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D   PN + SL   +I  +  G  HT  ++ +G V+ FG   +GQLG      E  PR  
Sbjct: 229 DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR-- 286

Query: 399 DAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
               L       ++CG +HT A +   G+++ +G    GQLG G   +R  P  V
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLGT-GGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPR--NIKSLSDIQIIQVACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VFCWG NKYGQLGLG    +    Q+  ++ G     VA G  H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      +  ++  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 439 GL-----GDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQII---QVACGYYHSLALS 153



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 76/304 (25%), Positives = 124/304 (40%), Gaps = 48/304 (15%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D     + S +   +P      ++  I++ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++  EV+ WG  +       +G L  GT    D  ++ S  L + +     
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK-------YGQLGLGT----DCKKQTSPQLIKSLLGIPF 192

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           +  ++GG  S          G  R +              DEN    P L+      +I 
Sbjct: 193 MQVAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRSQKIV 245

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +                
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 288

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                     F + G+ V  IACG +H SA +  +G + +FG G  GQ G GST +  SP
Sbjct: 289 ----------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 344 NCVS 347
             V 
Sbjct: 339 FTVK 342


>gi|255569912|ref|XP_002525919.1| Protein pim1, putative [Ricinus communis]
 gi|223534748|gb|EEF36439.1| Protein pim1, putative [Ricinus communis]
          Length = 478

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 119/401 (29%), Positives = 171/401 (42%), Gaps = 57/401 (14%)

Query: 89  PEPFPLPTEASI--VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKD 146
           PE F  P  A+   +  A G  H  AV   G ++TWG  E       FG L  GT   K 
Sbjct: 51  PELFGCPAGANARWLDIACGREHTAAVASDGSLFTWGANE-------FGQLGDGTEEGKK 103

Query: 147 VFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDE 206
             ++     TE V   S  +  +   +   +  G+         IS ++      + G  
Sbjct: 104 YPKKVKQLETEFVKSVSCGAHCTAAIAEPRENDGT---------ISTSRLWVWGQNQGSN 154

Query: 207 NLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPH 266
               F     LN    I  V+ G  H +ALS+ G +  WGY   GQLG G     +  P 
Sbjct: 155 YPRLFSGAFALN--TIICQVSCGAVHVVALSEDGLLQAWGYNEYGQLGRGITCEGLQGPR 212

Query: 267 PIPCIESSYGK--DRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTF 324
            I    ++Y K  D +  L +                +  ++CG  H+A I++ G + T+
Sbjct: 213 VI----NAYAKFLDEAPELVK----------------ITRVSCGEYHTAAISEKGEVYTW 252

Query: 325 GWGLYGQCGQGST---DDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
           G G  GQ G  S    + EL P  V +L GI I  VA G  HT  ++  G +YA+GG+QF
Sbjct: 253 GLGSTGQLGHTSLQSGNKELLPRRVVALDGILITDVACGGVHTCAVTQKGALYAWGGSQF 312

Query: 382 GQLGTGGDQ-------AETLPRLLDAPSLEN-VHSKSVSCGARHTAVIADDGKVFCWGWN 433
           GQLG G          ++T   L + P+L      + V+CG  HT +   DG++  WG+N
Sbjct: 313 GQLGLGPQTGSFSFIPSDTESFLRNIPALVFPTGVQLVACGHSHTLICLRDGRIHGWGYN 372

Query: 434 KYGQLGLGDVIDRNIPSQVTIEGCV--PRNVACGWWHTLLL 472
            YGQ           PS V  + CV   R +A G  H+ +L
Sbjct: 373 SYGQAANEKTTYAWYPSPV--DWCVGEVRKLAAGGGHSAVL 411



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 7/110 (6%)

Query: 373 VYAFGGNQFGQLGTGGDQAETL------PRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           +Y +G N  GQ G  G + E        P L   P+  N     ++CG  HTA +A DG 
Sbjct: 23  IYVWGYNHNGQTGRKGKEQELRIPKQLSPELFGCPAGANARWLDIACGREHTAAVASDGS 82

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLAVP 475
           +F WG N++GQLG G    +  P +V  +E    ++V+CG   T  +A P
Sbjct: 83  LFTWGANEFGQLGDGTEEGKKYPKKVKQLETEFVKSVSCGAHCTAAIAEP 132



 Score = 38.9 bits (89), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 37/84 (44%), Gaps = 9/84 (10%)

Query: 59  AISDSRKLITWG--STDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEG 116
           AIS+  ++ TWG  ST  LG + + SG    +P          I   A G  H  AVT+ 
Sbjct: 242 AISEKGEVYTWGLGSTGQLGHTSLQSGNKELLPRRVVALDGILITDVACGGVHTCAVTQK 301

Query: 117 GEVYTWGWKECVPSGRVFGDLSTG 140
           G +Y WG       G  FG L  G
Sbjct: 302 GALYAWG-------GSQFGQLGLG 318


>gi|403273887|ref|XP_003928729.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Saimiri boliviensis boliviensis]
          Length = 979

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 113/249 (45%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +           
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQ------- 138

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDEL 341
                              +  +ACG  HS  ++ A  +  +G   YGQ G G+    + 
Sbjct: 139 -------------------IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQT 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  + SLLGI    VAAG  H+  ++  G ++ +G N+FGQLG   +    +P LL   
Sbjct: 180 SPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK-- 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL +     + CG  HTA +  +G VF +G   YGQLG         P +V  + G +  
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297

Query: 461 NVACGWWHT 469
            +ACG  HT
Sbjct: 298 QIACGRQHT 306



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 115/248 (46%), Gaps = 36/248 (14%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++I  VA G  H+LALS   +V+ WG    GQLGLG+  +  +SP     I+S  G    
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQ---LIKSLLG---- 189

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTD 338
                           +P      +A GG HS V+T +GA+  FGWG   +GQ G    +
Sbjct: 190 ----------------IP---FMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDEN 228

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D   PN + SL   +I  +  G  HT  ++ +G V+ FG   +GQLG      E  PR  
Sbjct: 229 DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR-- 286

Query: 399 DAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC 457
               L       ++CG +HT A +   G+++ +G    GQLG G   +R  P   T++G 
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP--FTVKGN 344

Query: 458 -VPRNVAC 464
             P N  C
Sbjct: 345 WYPYNGQC 352



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLGT-GGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VFCWG NKYGQLGLG    +    Q+  ++ G     VA G  H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      +  ++  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 439 GL-----GDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALS 153



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 77/304 (25%), Positives = 124/304 (40%), Gaps = 48/304 (15%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D     + S +   +P      ++  IV+ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++  EV+ WG  +       +G L  GT    D  ++ S  L + +     
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK-------YGQLGLGT----DCKKQTSPQLIKSLLGIPF 192

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           +  ++GG  S          G  R +              DEN    P L+      +I 
Sbjct: 193 MQVAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRSQKIV 245

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +                
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 288

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                     F + G+ V  IACG +H SA +  +G + +FG G  GQ G GST +  SP
Sbjct: 289 ----------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 344 NCVS 347
             V 
Sbjct: 339 FTVK 342


>gi|403273885|ref|XP_003928728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Saimiri boliviensis boliviensis]
          Length = 1057

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 113/250 (45%), Gaps = 30/250 (12%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
            I  V+ G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +          
Sbjct: 85  NIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQ------ 138

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDE 340
                               +  +ACG  HS  ++ A  +  +G   YGQ G G+    +
Sbjct: 139 --------------------IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQ 178

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
            SP  + SLLGI    VAAG  H+  ++  G ++ +G N+FGQLG   +    +P LL  
Sbjct: 179 TSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK- 237

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVP 459
            SL +     + CG  HTA +  +G VF +G   YGQLG         P +V  + G + 
Sbjct: 238 -SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 460 RNVACGWWHT 469
             +ACG  HT
Sbjct: 297 TQIACGRQHT 306



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/235 (32%), Positives = 109/235 (46%), Gaps = 33/235 (14%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++I  VA G  H+LALS   +V+ WG    GQLGLG+  +  +SP     I+S  G    
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQ---LIKSLLG---- 189

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTD 338
                           +P      +A GG HS V+T +GA+  FGWG   +GQ G    +
Sbjct: 190 ----------------IP---FMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDEN 228

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D   PN + SL   +I  +  G  HT  ++ +G V+ FG   +GQLG      E  PR  
Sbjct: 229 DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR-- 286

Query: 399 DAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
               L       ++CG +HT A +   G+++ +G    GQLG G   +R  P  V
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLGT-GGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VFCWG NKYGQLGLG    +    Q+  ++ G     VA G  H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      +  ++  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 439 GL-----GDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALS 153



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 77/304 (25%), Positives = 124/304 (40%), Gaps = 48/304 (15%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D     + S +   +P      ++  IV+ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++  EV+ WG  +       +G L  GT    D  ++ S  L + +     
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK-------YGQLGLGT----DCKKQTSPQLIKSLLGIPF 192

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           +  ++GG  S          G  R +              DEN    P L+      +I 
Sbjct: 193 MQVAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRSQKIV 245

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +                
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 288

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                     F + G+ V  IACG +H SA +  +G + +FG G  GQ G GST +  SP
Sbjct: 289 ----------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 344 NCVS 347
             V 
Sbjct: 339 FTVK 342


>gi|357520085|ref|XP_003630331.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355524353|gb|AET04807.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 371

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 102/176 (57%), Gaps = 3/176 (1%)

Query: 299 GNYVKGIACGGRHSAVITDAGA-LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGV 357
           G  +  + CG  ++   + +G  + ++GWG +G+ G G   D   P+ + +L G++I+ +
Sbjct: 155 GQDIVSVTCGADYTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQI 214

Query: 358 AAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARH 417
           + G  H + ++ +  V ++G NQ G+LG G  +   +P+ + A   E +  K V+ GA H
Sbjct: 215 SCGDCHCLAVTMENKVLSWGRNQNGELGLGTTKDSHVPQKILA--FEGIRIKMVAAGAEH 272

Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           +  I +DG ++ WGW +YG LGLGD  DR IP +V I+G     V+CGW HT+ ++
Sbjct: 273 SVAITEDGDLYGWGWGRYGNLGLGDTNDRLIPEKVNIDGDKIVMVSCGWRHTISIS 328



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/250 (32%), Positives = 123/250 (49%), Gaps = 31/250 (12%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQ-VWGWGYGGEGQLGLGSRIRMV 262
           GD +    P  ++   G  I +V  G  +T+A S  G+ V+ WG+G  G+LG G    + 
Sbjct: 139 GDTDDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGWGDFGRLGHGDPSDLF 198

Query: 263 SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL 322
             PHPI  ++                     G R+     K I+CG  H   +T    +L
Sbjct: 199 I-PHPIRALQ---------------------GLRI-----KQISCGDCHCLAVTMENKVL 231

Query: 323 TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFG 382
           ++G    G+ G G+T D   P  + +  GI+I+ VAAG  H++ I+ DGD+Y +G  ++G
Sbjct: 232 SWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYG 291

Query: 383 QLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGD 442
            LG G      +P  ++    + V    VSCG RHT  I+  G ++  GW+KYGQLG GD
Sbjct: 292 NLGLGDTNDRLIPEKVNIDGDKIVM---VSCGWRHTISISSSGGLYTHGWSKYGQLGHGD 348

Query: 443 VIDRNIPSQV 452
             D  +P +V
Sbjct: 349 FEDCLVPRKV 358



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 115/272 (42%), Gaps = 55/272 (20%)

Query: 85  HGEIPEPFPLPTEAS------IVKAAAGWAHCVAVTEGG-EVYTWGWKECVPSGRVFGDL 137
           HG+  +   LPT+ S      IV    G  + VA ++ G +VY+WGW +       FG L
Sbjct: 138 HGDTDDRL-LPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGWGD-------FGRL 189

Query: 138 STGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQT 197
             G G   D+F        + +  + Q+S       + T          + + +S  +  
Sbjct: 190 --GHGDPSDLFIPHPIRALQGLRIK-QISCGDCHCLAVT---------MENKVLSWGRNQ 237

Query: 198 AESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS 257
                 G    S  P  +    G+RI  VAAG  H++A+++ G ++GWG+G  G LGLG 
Sbjct: 238 NGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLG- 296

Query: 258 RIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITD 317
                               D +  L    VN       + G+ +  ++CG RH+  I+ 
Sbjct: 297 --------------------DTNDRLIPEKVN-------IDGDKIVMVSCGWRHTISISS 329

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSL 349
           +G L T GW  YGQ G G  +D L P  V +L
Sbjct: 330 SGGLYTHGWSKYGQLGHGDFEDCLVPRKVQAL 361



 Score = 45.1 bits (105), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 66/140 (47%), Gaps = 14/140 (10%)

Query: 14  VFMWGYLP-GALPQRSPILSPLVVRLPLTV--GSAWRDVCGGGCGFAMAISDSRKLITWG 70
           V+ WG+   G L    P  S L +  P+    G   + +  G C   +A++   K+++WG
Sbjct: 178 VYSWGWGDFGRLGHGDP--SDLFIPHPIRALQGLRIKQISCGDC-HCLAVTMENKVLSWG 234

Query: 71  STDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPS 130
              + G+  + + K   +P+         I   AAG  H VA+TE G++Y WGW      
Sbjct: 235 RNQN-GELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGW------ 287

Query: 131 GRVFGDLSTGTGLDKDVFER 150
           GR +G+L  G   D+ + E+
Sbjct: 288 GR-YGNLGLGDTNDRLIPEK 306


>gi|403273883|ref|XP_003928727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Saimiri boliviensis boliviensis]
          Length = 1049

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 113/249 (45%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +           
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQ------- 138

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDEL 341
                              +  +ACG  HS  ++ A  +  +G   YGQ G G+    + 
Sbjct: 139 -------------------IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQT 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  + SLLGI    VAAG  H+  ++  G ++ +G N+FGQLG   +    +P LL   
Sbjct: 180 SPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK-- 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL +     + CG  HTA +  +G VF +G   YGQLG         P +V  + G +  
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297

Query: 461 NVACGWWHT 469
            +ACG  HT
Sbjct: 298 QIACGRQHT 306



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/235 (32%), Positives = 109/235 (46%), Gaps = 33/235 (14%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++I  VA G  H+LALS   +V+ WG    GQLGLG+  +  +SP     I+S  G    
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQ---LIKSLLG---- 189

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTD 338
                           +P      +A GG HS V+T +GA+  FGWG   +GQ G    +
Sbjct: 190 ----------------IP---FMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDEN 228

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D   PN + SL   +I  +  G  HT  ++ +G V+ FG   +GQLG      E  PR  
Sbjct: 229 DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR-- 286

Query: 399 DAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
               L       ++CG +HT A +   G+++ +G    GQLG G   +R  P  V
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLGT-GGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VFCWG NKYGQLGLG    +    Q+  ++ G     VA G  H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      +  ++  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 439 GL-----GDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALS 153



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 77/304 (25%), Positives = 124/304 (40%), Gaps = 48/304 (15%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D     + S +   +P      ++  IV+ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++  EV+ WG  +       +G L  GT    D  ++ S  L + +     
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK-------YGQLGLGT----DCKKQTSPQLIKSLLGIPF 192

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           +  ++GG  S          G  R +              DEN    P L+      +I 
Sbjct: 193 MQVAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRSQKIV 245

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +                
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 288

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                     F + G+ V  IACG +H SA +  +G + +FG G  GQ G GST +  SP
Sbjct: 289 ----------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 344 NCVS 347
             V 
Sbjct: 339 FTVK 342


>gi|402880677|ref|XP_003903924.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Papio anubis]
          Length = 1057

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 113/249 (45%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +           
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQ------- 138

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDEL 341
                              +  +ACG  HS  ++ A  +  +G   YGQ G G+    + 
Sbjct: 139 -------------------IIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQT 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  + SLLGI    VAAG  H+  ++  G ++ +G N+FGQLG   +    +P LL   
Sbjct: 180 SPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK-- 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL +     + CG  HTA +  +G VF +G   YGQLG         P +V  + G +  
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297

Query: 461 NVACGWWHT 469
            +ACG  HT
Sbjct: 298 QIACGRQHT 306



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/235 (32%), Positives = 109/235 (46%), Gaps = 33/235 (14%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++I  VA G  H+LALS   +V+ WG    GQLGLG+  +  +SP     I+S  G    
Sbjct: 137 IQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQ---LIKSLLG---- 189

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTD 338
                           +P      +A GG HS V+T +GA+  FGWG   +GQ G    +
Sbjct: 190 ----------------IP---FMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDEN 228

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D   PN + SL   +I  +  G  HT  ++ +G V+ FG   +GQLG      E  PR  
Sbjct: 229 DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR-- 286

Query: 399 DAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
               L       ++CG +HT A +   G+++ +G    GQLG G   +R  P  V
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLGT-GGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPR--NIKSLSDIQIIQVACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VFCWG NKYGQLGLG    +    Q+  ++ G     VA G  H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      +  ++  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 439 GL-----GDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQII---QVACGYYHSLALS 153



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 76/304 (25%), Positives = 124/304 (40%), Gaps = 48/304 (15%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D     + S +   +P      ++  I++ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++  EV+ WG  +       +G L  GT    D  ++ S  L + +     
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK-------YGQLGLGT----DCKKQTSPQLIKSLLGIPF 192

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           +  ++GG  S          G  R +              DEN    P L+      +I 
Sbjct: 193 MQVAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRSQKIV 245

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +                
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 288

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                     F + G+ V  IACG +H SA +  +G + +FG G  GQ G GST +  SP
Sbjct: 289 ----------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 344 NCVS 347
             V 
Sbjct: 339 FTVK 342


>gi|354477676|ref|XP_003501045.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Cricetulus griseus]
          Length = 1049

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/249 (32%), Positives = 112/249 (44%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +           
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQ------- 138

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDEL 341
                              +  +ACG  HS  ++ A  +  +G   YGQ G G     + 
Sbjct: 139 -------------------IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQT 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  + SLLGI    VAAG  H+  ++  G ++ +G N+FGQLG   +    +P LL   
Sbjct: 180 SPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLL--K 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL +     + CG  HTA +  +G VF +G   YGQLG         P +V  + G +  
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297

Query: 461 NVACGWWHT 469
            VACG  HT
Sbjct: 298 QVACGRQHT 306



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/235 (32%), Positives = 108/235 (45%), Gaps = 33/235 (14%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++I  VA G  H+LALS   +V+ WG    GQLGLG   +  +SP     I+S  G    
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQ---LIKSLLG---- 189

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTD 338
                           +P      +A GG HS V+T +GA+  FGWG   +GQ G    +
Sbjct: 190 ----------------IP---FMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDEN 228

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D   PN + SL   +I  +  G  HT  ++ +G V+ FG   +GQLG      E  PR  
Sbjct: 229 DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR-- 286

Query: 399 DAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
               L       V+CG +HT A +   G+++ +G    GQLG G   +R  P  V
Sbjct: 287 KVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLGT-GGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VY++G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPR--NIKSLSDIQIVQVACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VFCWG NKYGQLGLG    +    Q+  ++ G     VA G  H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 81/160 (50%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   YGQ G G  D+E  L P         ++  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYSWGLDSDGQL 116

Query: 439 GL-----GDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLLGSEEYIRVPRNIKSLSDIQIV---QVACGYYHSLALS 153



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 76/304 (25%), Positives = 126/304 (41%), Gaps = 48/304 (15%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++ +WG   D     + S ++  +P      ++  IV+ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++  EV+ WG  +       +G L    GL  D  ++ S  L + +     
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK-------YGQL----GLGIDCKKQTSPQLIKSLLGIPF 192

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           +  ++GG  S          G  R +              DEN    P L+      +I 
Sbjct: 193 MQVAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRSQKIV 245

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +                
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 288

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                     F + G+ V  +ACG +H SA +  +G + +FG G  GQ G GST +  SP
Sbjct: 289 ----------FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 344 NCVS 347
             V 
Sbjct: 339 FTVK 342


>gi|355562563|gb|EHH19157.1| hypothetical protein EGK_19807 [Macaca mulatta]
          Length = 1054

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 113/250 (45%), Gaps = 30/250 (12%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
            I  V+ G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +          
Sbjct: 85  NIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQ------ 138

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDE 340
                               +  +ACG  HS  ++ A  +  +G   YGQ G G+    +
Sbjct: 139 --------------------IIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQ 178

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
            SP  + SLLGI    VAAG  H+  ++  G ++ +G N+FGQLG   +    +P LL  
Sbjct: 179 TSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLL-- 236

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVP 459
            SL +     + CG  HTA +  +G VF +G   YGQLG         P +V  + G + 
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 460 RNVACGWWHT 469
             +ACG  HT
Sbjct: 297 TQIACGRQHT 306



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/235 (32%), Positives = 109/235 (46%), Gaps = 33/235 (14%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++I  VA G  H+LALS   +V+ WG    GQLGLG+  +  +SP     I+S  G    
Sbjct: 137 IQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQ---LIKSLLG---- 189

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTD 338
                           +P      +A GG HS V+T +GA+  FGWG   +GQ G    +
Sbjct: 190 ----------------IP---FMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDEN 228

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D   PN + SL   +I  +  G  HT  ++ +G V+ FG   +GQLG      E  PR  
Sbjct: 229 DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR-- 286

Query: 399 DAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
               L       ++CG +HT A +   G+++ +G    GQLG G   +R  P  V
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLGT-GGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPR--NIKSLSDIQIIQVACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VFCWG NKYGQLGLG    +    Q+  ++ G     VA G  H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      +  ++  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 439 GL-----GDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQII---QVACGYYHSLALS 153



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 76/304 (25%), Positives = 124/304 (40%), Gaps = 48/304 (15%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D     + S +   +P      ++  I++ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++  EV+ WG  +       +G L  GT    D  ++ S  L + +     
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK-------YGQLGLGT----DCKKQTSPQLIKSLLGIPF 192

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           +  ++GG  S          G  R +              DEN    P L+      +I 
Sbjct: 193 MQVAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRSQKIV 245

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +                
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 288

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                     F + G+ V  IACG +H SA +  +G + +FG G  GQ G GST +  SP
Sbjct: 289 ----------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 344 NCVS 347
             V 
Sbjct: 339 FTVK 342


>gi|354477678|ref|XP_003501046.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Cricetulus griseus]
          Length = 1057

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/249 (32%), Positives = 112/249 (44%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +           
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQ------- 138

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDEL 341
                              +  +ACG  HS  ++ A  +  +G   YGQ G G     + 
Sbjct: 139 -------------------IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQT 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  + SLLGI    VAAG  H+  ++  G ++ +G N+FGQLG   +    +P LL   
Sbjct: 180 SPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLL--K 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL +     + CG  HTA +  +G VF +G   YGQLG         P +V  + G +  
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297

Query: 461 NVACGWWHT 469
            VACG  HT
Sbjct: 298 QVACGRQHT 306



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/235 (32%), Positives = 108/235 (45%), Gaps = 33/235 (14%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++I  VA G  H+LALS   +V+ WG    GQLGLG   +  +SP     I+S  G    
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQ---LIKSLLG---- 189

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTD 338
                           +P      +A GG HS V+T +GA+  FGWG   +GQ G    +
Sbjct: 190 ----------------IP---FMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDEN 228

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D   PN + SL   +I  +  G  HT  ++ +G V+ FG   +GQLG      E  PR  
Sbjct: 229 DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR-- 286

Query: 399 DAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
               L       V+CG +HT A +   G+++ +G    GQLG G   +R  P  V
Sbjct: 287 KVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLGT-GGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VY++G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPR--NIKSLSDIQIVQVACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VFCWG NKYGQLGLG    +    Q+  ++ G     VA G  H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 81/160 (50%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   YGQ G G  D+E  L P         ++  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYSWGLDSDGQL 116

Query: 439 GL-----GDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLLGSEEYIRVPRNIKSLSDIQIV---QVACGYYHSLALS 153



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 76/304 (25%), Positives = 126/304 (41%), Gaps = 48/304 (15%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++ +WG   D     + S ++  +P      ++  IV+ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++  EV+ WG  +       +G L    GL  D  ++ S  L + +     
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK-------YGQL----GLGIDCKKQTSPQLIKSLLGIPF 192

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           +  ++GG  S          G  R +              DEN    P L+      +I 
Sbjct: 193 MQVAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRSQKIV 245

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +                
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 288

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                     F + G+ V  +ACG +H SA +  +G + +FG G  GQ G GST +  SP
Sbjct: 289 ----------FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 344 NCVS 347
             V 
Sbjct: 339 FTVK 342


>gi|383411601|gb|AFH29014.1| putative E3 ubiquitin-protein ligase HERC4 isoform b [Macaca
           mulatta]
          Length = 1049

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 113/249 (45%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +           
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQ------- 138

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDEL 341
                              +  +ACG  HS  ++ A  +  +G   YGQ G G+    + 
Sbjct: 139 -------------------IIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQT 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  + SLLGI    VAAG  H+  ++  G ++ +G N+FGQLG   +    +P LL   
Sbjct: 180 SPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK-- 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL +     + CG  HTA +  +G VF +G   YGQLG         P +V  + G +  
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297

Query: 461 NVACGWWHT 469
            +ACG  HT
Sbjct: 298 QIACGRQHT 306



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/235 (32%), Positives = 109/235 (46%), Gaps = 33/235 (14%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++I  VA G  H+LALS   +V+ WG    GQLGLG+  +  +SP     I+S  G    
Sbjct: 137 IQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQ---LIKSLLG---- 189

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTD 338
                           +P      +A GG HS V+T +GA+  FGWG   +GQ G    +
Sbjct: 190 ----------------IP---FMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDEN 228

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D   PN + SL   +I  +  G  HT  ++ +G V+ FG   +GQLG      E  PR  
Sbjct: 229 DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR-- 286

Query: 399 DAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
               L       ++CG +HT A +   G+++ +G    GQLG G   +R  P  V
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLGT-GGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPR--NIKSLSDIQIIQVACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VFCWG NKYGQLGLG    +    Q+  ++ G     VA G  H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      +  ++  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 439 GL-----GDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQII---QVACGYYHSLALS 153



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 76/304 (25%), Positives = 124/304 (40%), Gaps = 48/304 (15%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D     + S +   +P      ++  I++ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++  EV+ WG  +       +G L  GT    D  ++ S  L + +     
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK-------YGQLGLGT----DCKKQTSPQLIKSLLGIPF 192

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           +  ++GG  S          G  R +              DEN    P L+      +I 
Sbjct: 193 MQVAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRSQKIV 245

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +                
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 288

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                     F + G+ V  IACG +H SA +  +G + +FG G  GQ G GST +  SP
Sbjct: 289 ----------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 344 NCVS 347
             V 
Sbjct: 339 FTVK 342


>gi|344247622|gb|EGW03726.1| putative E3 ubiquitin-protein ligase HERC4 [Cricetulus griseus]
          Length = 835

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/249 (32%), Positives = 112/249 (44%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +           
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQ------- 138

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDEL 341
                              +  +ACG  HS  ++ A  +  +G   YGQ G G     + 
Sbjct: 139 -------------------IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQT 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  + SLLGI    VAAG  H+  ++  G ++ +G N+FGQLG   +    +P LL   
Sbjct: 180 SPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK-- 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL +     + CG  HTA +  +G VF +G   YGQLG         P +V  + G +  
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297

Query: 461 NVACGWWHT 469
            VACG  HT
Sbjct: 298 QVACGRQHT 306



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/235 (32%), Positives = 108/235 (45%), Gaps = 33/235 (14%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++I  VA G  H+LALS   +V+ WG    GQLGLG   +  +SP     I+S  G    
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQ---LIKSLLG---- 189

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTD 338
                           +P      +A GG HS V+T +GA+  FGWG   +GQ G    +
Sbjct: 190 ----------------IP---FMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDEN 228

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D   PN + SL   +I  +  G  HT  ++ +G V+ FG   +GQLG      E  PR  
Sbjct: 229 DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR-- 286

Query: 399 DAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
               L       V+CG +HT A +   G+++ +G    GQLG G   +R  P  V
Sbjct: 287 KVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLGT-GGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VY++G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPR--NIKSLSDIQIVQVACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VFCWG NKYGQLGLG    +    Q+  ++ G     VA G  H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 81/160 (50%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   YGQ G G  D+E  L P         ++  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYSWGLDSDGQL 116

Query: 439 GL-----GDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLLGSEEYIRVPRNIKSLSDIQIV---QVACGYYHSLALS 153



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 76/304 (25%), Positives = 126/304 (41%), Gaps = 48/304 (15%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++ +WG   D     + S ++  +P      ++  IV+ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++  EV+ WG  +       +G L    GL  D  ++ S  L + +     
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK-------YGQL----GLGIDCKKQTSPQLIKSLLGIPF 192

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           +  ++GG  S          G  R +              DEN    P L+      +I 
Sbjct: 193 MQVAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRSQKIV 245

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +                
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 288

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                     F + G+ V  +ACG +H SA +  +G + +FG G  GQ G GST +  SP
Sbjct: 289 ----------FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 344 NCVS 347
             V 
Sbjct: 339 FTVK 342


>gi|37747571|gb|AAH60033.1| Herc4 protein [Mus musculus]
          Length = 1057

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/249 (32%), Positives = 111/249 (44%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  VA G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +           
Sbjct: 86  IVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQ------- 138

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDEL 341
                              +  +ACG  HS  ++ A  +  +G   YGQ G G     + 
Sbjct: 139 -------------------IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQT 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  + SLLGI    VAAG  H+  ++  G ++ +G N+FGQLG   +    +P LL   
Sbjct: 180 SPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLL--K 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL +     + CG  HTA +  +G VF +G   YGQLG         P +V  + G +  
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297

Query: 461 NVACGWWHT 469
             ACG  HT
Sbjct: 298 QAACGRQHT 306



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/235 (32%), Positives = 107/235 (45%), Gaps = 33/235 (14%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++I  VA G  H+LALS   +V+ WG    GQLGLG   +  +SP     I+S  G    
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQ---LIKSLLG---- 189

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTD 338
                           +P      +A GG HS V+T +GA+  FGWG   +GQ G    +
Sbjct: 190 ----------------IP---FMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDEN 228

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D   PN + SL   +I  +  G  HT  ++ +G V+ FG   +GQLG      E  PR  
Sbjct: 229 DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR-- 286

Query: 399 DAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
               L        +CG +HT A +   G+++ +G    GQLG G   +R  P  V
Sbjct: 287 KVFELMGSIVTQAACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/176 (34%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  VA G 
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVACGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLG-TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VFCWG NKYGQLGLG    +    Q+  ++ G     VA G  H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   YGQ G G  D+E  L P      +  ++  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +V+CG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVACGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 439 GLGDV-----IDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALS 153



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 76/304 (25%), Positives = 122/304 (40%), Gaps = 48/304 (15%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D       S +   +P      ++  IV+ A
Sbjct: 84  QNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++  EV+ WG  +       +G L    GL  D  ++ S  L + +     
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK-------YGQL----GLGIDCQKQTSPQLIKSLLGIPF 192

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           +  ++GG  S          G  R +              DEN    P L+      +I 
Sbjct: 193 MQVAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRSQKIV 245

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +                
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 288

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                     F + G+ V   ACG +H SA +  +G + +FG G  GQ G GST +  SP
Sbjct: 289 ----------FELMGSIVTQAACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 344 NCVS 347
             V 
Sbjct: 339 FTVK 342


>gi|383872260|ref|NP_001244507.1| probable E3 ubiquitin-protein ligase HERC4 [Macaca mulatta]
 gi|355782894|gb|EHH64815.1| hypothetical protein EGM_18130 [Macaca fascicularis]
 gi|380786489|gb|AFE65120.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
           mulatta]
 gi|383411599|gb|AFH29013.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
           mulatta]
          Length = 1057

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 113/249 (45%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +           
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQ------- 138

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDEL 341
                              +  +ACG  HS  ++ A  +  +G   YGQ G G+    + 
Sbjct: 139 -------------------IIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQT 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  + SLLGI    VAAG  H+  ++  G ++ +G N+FGQLG   +    +P LL   
Sbjct: 180 SPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLL--K 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL +     + CG  HTA +  +G VF +G   YGQLG         P +V  + G +  
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297

Query: 461 NVACGWWHT 469
            +ACG  HT
Sbjct: 298 QIACGRQHT 306



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/235 (32%), Positives = 109/235 (46%), Gaps = 33/235 (14%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++I  VA G  H+LALS   +V+ WG    GQLGLG+  +  +SP     I+S  G    
Sbjct: 137 IQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQ---LIKSLLG---- 189

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTD 338
                           +P      +A GG HS V+T +GA+  FGWG   +GQ G    +
Sbjct: 190 ----------------IP---FMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDEN 228

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D   PN + SL   +I  +  G  HT  ++ +G V+ FG   +GQLG      E  PR  
Sbjct: 229 DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR-- 286

Query: 399 DAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
               L       ++CG +HT A +   G+++ +G    GQLG G   +R  P  V
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLGT-GGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPR--NIKSLSDIQIIQVACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VFCWG NKYGQLGLG    +    Q+  ++ G     VA G  H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      +  ++  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 439 GL-----GDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQII---QVACGYYHSLALS 153



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 76/304 (25%), Positives = 124/304 (40%), Gaps = 48/304 (15%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D     + S +   +P      ++  I++ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++  EV+ WG  +       +G L  GT    D  ++ S  L + +     
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK-------YGQLGLGT----DCKKQTSPQLIKSLLGIPF 192

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           +  ++GG  S          G  R +              DEN    P L+      +I 
Sbjct: 193 MQVAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRSQKIV 245

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +                
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 288

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                     F + G+ V  IACG +H SA +  +G + +FG G  GQ G GST +  SP
Sbjct: 289 ----------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 344 NCVS 347
             V 
Sbjct: 339 FTVK 342


>gi|397520495|ref|XP_003830352.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Pan paniscus]
          Length = 979

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 113/249 (45%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +           
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQ------- 138

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDEL 341
                              +  +ACG  HS  ++ A  +  +G   YGQ G G+    + 
Sbjct: 139 -------------------IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQT 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  + SLLGI    VAAG  H+  ++  G ++ +G N+FGQLG   +    +P LL   
Sbjct: 180 SPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK-- 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL +     + CG  HTA +  +G VF +G   YGQLG         P +V  + G +  
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297

Query: 461 NVACGWWHT 469
            +ACG  HT
Sbjct: 298 QIACGRQHT 306



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 115/248 (46%), Gaps = 36/248 (14%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++I  VA G  H+LALS   +V+ WG    GQLGLG+  +  +SP     ++S  G    
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQ---LLKSLLG---- 189

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTD 338
                           +P      +A GG HS V+T +GA+  FGWG   +GQ G    +
Sbjct: 190 ----------------IP---FMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDEN 228

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D   PN + SL   +I  +  G  HT  ++ +G V+ FG   +GQLG      E  PR  
Sbjct: 229 DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR-- 286

Query: 399 DAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC 457
               L       ++CG +HT A +   G+++ +G    GQLG G   +R  P   T++G 
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP--FTVKGN 344

Query: 458 -VPRNVAC 464
             P N  C
Sbjct: 345 WYPYNGQC 352



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLG-TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VFCWG NKYGQLGLG    +    Q+  ++ G     VA G  H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      +  ++  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 439 GLGDV-----IDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALS 153



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 124/304 (40%), Gaps = 48/304 (15%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D     V S +   +P      ++  IV+ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++  EV+ WG  +       +G L  GT    D  ++ S  L + +     
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK-------YGQLGLGT----DCKKQTSPQLLKSLLGIPF 192

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           +  ++GG  S          G  R +              DEN    P L+      +I 
Sbjct: 193 MQVAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRSQKIV 245

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +                
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 288

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                     F + G+ V  IACG +H SA +  +G + +FG G  GQ G GST +  SP
Sbjct: 289 ----------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 344 NCVS 347
             V 
Sbjct: 339 FTVK 342


>gi|114630760|ref|XP_001167652.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 4
           [Pan troglodytes]
          Length = 979

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 113/249 (45%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +           
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQ------- 138

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDEL 341
                              +  +ACG  HS  ++ A  +  +G   YGQ G G+    + 
Sbjct: 139 -------------------IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQT 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  + SLLGI    VAAG  H+  ++  G ++ +G N+FGQLG   +    +P LL   
Sbjct: 180 SPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK-- 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL +     + CG  HTA +  +G VF +G   YGQLG         P +V  + G +  
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297

Query: 461 NVACGWWHT 469
            +ACG  HT
Sbjct: 298 QIACGRQHT 306



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 115/248 (46%), Gaps = 36/248 (14%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++I  VA G  H+LALS   +V+ WG    GQLGLG+  +  +SP     ++S  G    
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQ---LLKSLLG---- 189

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTD 338
                           +P      +A GG HS V+T +GA+  FGWG   +GQ G    +
Sbjct: 190 ----------------IP---FMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDEN 228

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D   PN + SL   +I  +  G  HT  ++ +G V+ FG   +GQLG      E  PR  
Sbjct: 229 DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR-- 286

Query: 399 DAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC 457
               L       ++CG +HT A +   G+++ +G    GQLG G   +R  P   T++G 
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP--FTVKGN 344

Query: 458 -VPRNVAC 464
             P N  C
Sbjct: 345 WYPYNGQC 352



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLG-TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VFCWG NKYGQLGLG    +    Q+  ++ G     VA G  H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      +  ++  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 439 GLGDV-----IDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALS 153



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 124/304 (40%), Gaps = 48/304 (15%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D     V S +   +P      ++  IV+ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++  EV+ WG  +       +G L  GT    D  ++ S  L + +     
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK-------YGQLGLGT----DCKKQTSPQLLKSLLGIPF 192

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           +  ++GG  S          G  R +              DEN    P L+      +I 
Sbjct: 193 MQVAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRSQKIV 245

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +                
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 288

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                     F + G+ V  IACG +H SA +  +G + +FG G  GQ G GST +  SP
Sbjct: 289 ----------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 344 NCVS 347
             V 
Sbjct: 339 FTVK 342


>gi|410975285|ref|XP_003994063.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like, partial
           [Felis catus]
          Length = 621

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 111/250 (44%), Gaps = 30/250 (12%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
            I  V+ G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +          
Sbjct: 85  NIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQ------ 138

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDE 340
                               +  +ACG  HS  ++ A  +  +G   YGQ G G     +
Sbjct: 139 --------------------IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQ 178

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
            SP  + SLLGI    VAAG  H+  ++  G ++ +G N+FGQLG   +    +P LL  
Sbjct: 179 ASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK- 237

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVP 459
            SL       + CG  HTA +  +G VF +G   YGQLG         P +V  + G + 
Sbjct: 238 -SLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 460 RNVACGWWHT 469
             +ACG  HT
Sbjct: 297 TQIACGRQHT 306



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 114/248 (45%), Gaps = 36/248 (14%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++I  VA G  H+LALS   +V+ WG    GQLGLG   +  +SP     I+S  G    
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQ---LIKSLLG---- 189

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTD 338
                           +P      +A GG HS V+T +GA+  FGWG   +GQ G    +
Sbjct: 190 ----------------IP---FMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDEN 228

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D   PN + SL   +I  +  G  HT  ++ +G V+ FG   +GQLG      E  PR  
Sbjct: 229 DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR-- 286

Query: 399 DAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC 457
               L       ++CG +HT A +   G+++ +G    GQLG G   +R  P   T++G 
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP--FTVKGN 344

Query: 458 -VPRNVAC 464
             P N  C
Sbjct: 345 WFPYNGQC 352



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLGT-GGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VFCWG NKYGQLGLG    +    Q+  ++ G     VA G  H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      +  ++  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQLG   +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQLGH--EKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 439 GL-----GDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALS 153



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 77/304 (25%), Positives = 124/304 (40%), Gaps = 48/304 (15%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D     + S +   +P      ++  IV+ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++  EV+ WG  +       +G L    GL  D  ++ S  L + +     
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK-------YGQL----GLGIDCKKQASPQLIKSLLGIPF 192

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           +  ++GG  S          G  R +              DEN    P L+      +I 
Sbjct: 193 MQVAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRTQKIV 245

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +                
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 288

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                     F + G+ V  IACG +H SA +  +G + +FG G  GQ G GST +  SP
Sbjct: 289 ----------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 344 NCVS 347
             V 
Sbjct: 339 FTVK 342


>gi|55832181|gb|AAV66579.1| HECT and RCC1 containing protein 4 isoform 3 [Homo sapiens]
          Length = 979

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 113/249 (45%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +           
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQ------- 138

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDEL 341
                              +  +ACG  HS  ++ A  +  +G   YGQ G G+    + 
Sbjct: 139 -------------------IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQT 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  + SLLGI    VAAG  H+  ++  G ++ +G N+FGQLG   +    +P LL   
Sbjct: 180 SPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK-- 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL +     + CG  HTA +  +G VF +G   YGQLG         P +V  + G +  
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297

Query: 461 NVACGWWHT 469
            +ACG  HT
Sbjct: 298 EIACGRQHT 306



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 115/248 (46%), Gaps = 36/248 (14%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++I  VA G  H+LALS   +V+ WG    GQLGLG+  +  +SP     ++S  G    
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQ---LLKSLLG---- 189

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTD 338
                           +P      +A GG HS V+T +GA+  FGWG   +GQ G    +
Sbjct: 190 ----------------IP---FMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDEN 228

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D   PN + SL   +I  +  G  HT  ++ +G V+ FG   +GQLG      E  PR  
Sbjct: 229 DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR-- 286

Query: 399 DAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC 457
               L       ++CG +HT A +   G+++ +G    GQLG G   +R  P   T++G 
Sbjct: 287 KVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP--FTVKGN 344

Query: 458 -VPRNVAC 464
             P N  C
Sbjct: 345 WYPYNGQC 352



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLG-TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VFCWG NKYGQLGLG    +    Q+  ++ G     VA G  H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      +  ++  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 439 GLGDV-----IDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALS 153



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 124/304 (40%), Gaps = 48/304 (15%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D     V S +   +P      ++  IV+ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++  EV+ WG  +       +G L  GT    D  ++ S  L + +     
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK-------YGQLGLGT----DCKKQTSPQLLKSLLGIPF 192

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           +  ++GG  S          G  R +              DEN    P L+      +I 
Sbjct: 193 MQVAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRSQKIV 245

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +                
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 288

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                     F + G+ V  IACG +H SA +  +G + +FG G  GQ G GST +  SP
Sbjct: 289 ----------FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 344 NCVS 347
             V 
Sbjct: 339 FTVK 342


>gi|350405799|ref|XP_003487554.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Bombus impatiens]
          Length = 5118

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 124/251 (49%), Gaps = 32/251 (12%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GG+H LALS  G V+ WG G +G+LG G+R+ M   P  I            
Sbjct: 4346 VKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRL-MYDRPKLIE----------- 4393

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                            + G  +  IACGG HSA IT AG L T+G G YG+ G G ++D+
Sbjct: 4394 ---------------ELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQ 4438

Query: 341  LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L+P  V +L   ++  VA  +G   T+C++ D +V+++G   +G+LG GG     +P  +
Sbjct: 4439 LTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKIP--M 4496

Query: 399  DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGC 457
               SL  +    V CG++ +  +   G ++ WG   Y +LG G       P +V  ++G 
Sbjct: 4497 KIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVRRPRKVAALQGK 4556

Query: 458  VPRNVACGWWH 468
               ++A G  H
Sbjct: 4557 KIISIATGSLH 4567



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 93/322 (28%), Positives = 138/322 (42%), Gaps = 82/322 (25%)

Query: 204  GDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
            GD++    P L+       I  VA  +GG+H LAL+  G+++ WG G +G+LG G+ + +
Sbjct: 3322 GDDSNVCEPKLIPFLSQYMIKKVAVHSGGKHALALTQDGKIFSWGEGEDGKLGHGNSVSL 3381

Query: 262  VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
               P  I  ++S   +D                          IACG  HSA IT +G L
Sbjct: 3382 -DKPRLIESLKSKRIRD--------------------------IACGSGHSAAITSSGEL 3414

Query: 322  LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGN 379
             T+G G YG+ G G T  ++ P  V SL+G ++  VA G     T+ +++DG VY++G  
Sbjct: 3415 YTWGLGEYGRLGHGDTATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDG 3474

Query: 380  QFGQLGTGGDQAETLPRLLD---------------------------------------- 399
             FG+LG GG      P L+D                                        
Sbjct: 3475 DFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHG 3534

Query: 400  ------APSL-ENVHSKSV---SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIP 449
                   P+L E +  K V   + GA H   + D G+V+ WG N +GQ G G  I    P
Sbjct: 3535 NDHHVRKPTLVEGLRGKKVVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGSTIVNKKP 3594

Query: 450  SQV-TIEGCVPRNVACGWWHTL 470
            S V  ++      V+CG  H++
Sbjct: 3595 SLVHELDDARVNRVSCGSSHSI 3616



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 120/258 (46%), Gaps = 30/258 (11%)

Query: 211  FPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPC 270
             P L      +R   +  G +  LA++  G+V+  GYG  G+LG+G     V  P  +  
Sbjct: 4282 LPVLCESLSALRPVQLTGGEQTLLAVTADGKVYATGYGAAGRLGIGG-TDSVMVPTLLES 4340

Query: 271  IESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
            I+  + K       + +VNS                 GG+H   ++  G + ++G G  G
Sbjct: 4341 IQHVFVK-------KVAVNS-----------------GGKHCLALSSEGHVYSWGEGDDG 4376

Query: 331  QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            + G G+      P  +  LLG +I  +A G  H+  I+S G +Y +G  ++G+LG G  +
Sbjct: 4377 KLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSE 4436

Query: 391  AETLPRLLDAPSLENVHSKSVSCGA--RHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNI 448
             +  P+L++A  L++     V+CG+    T  + DD  V+ WG   YG+LG G      I
Sbjct: 4437 DQLTPKLVEA--LQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKI 4494

Query: 449  PSQV-TIEGCVPRNVACG 465
            P ++ ++ G     V CG
Sbjct: 4495 PMKIESLAGLGVIKVECG 4512



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 97/326 (29%), Positives = 135/326 (41%), Gaps = 62/326 (19%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFL-TEQV 159
            V   +G  HC+A++  G VY+WG  +        G L  G  L  D  +     L TE V
Sbjct: 4349 VAVNSGGKHCLALSSEGHVYSWGEGD-------DGKLGHGNRLMYDRPKLIEELLGTEIV 4401

Query: 160  SPRSQVSRSSGGTSSG---TDGRGS-GEEGSKRRRISLAKQTAESSSSGDENLSAFPCLV 215
                    S+  TS+G   T G+G  G  G                  GD      P LV
Sbjct: 4402 DIACGGHHSAAITSAGWLYTWGKGRYGRLGH-----------------GDSEDQLTPKLV 4444

Query: 216  TLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPC-IE 272
                  ++  VA  +G   TL ++D   VW WG G  G+LG G      S    IP  IE
Sbjct: 4445 EALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGG-----SDGCKIPMKIE 4499

Query: 273  SSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQC 332
            S                       + G  V  + CG + S  +T +GA+ T+G G Y + 
Sbjct: 4500 S-----------------------LAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRL 4536

Query: 333  GQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAE 392
            G G+ D    P  V++L G +I  +A G  H +  +  G+V+ +G N  GQLG G   A 
Sbjct: 4537 GHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSAL 4596

Query: 393  TLPRLLDAPSLENVHSKSVSCGARHT 418
              PRL+ A  L+      V+CG+ HT
Sbjct: 4597 QRPRLVHA--LQGKKITRVACGSAHT 4620



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 95/338 (28%), Positives = 136/338 (40%), Gaps = 60/338 (17%)

Query: 89   PEPFPLPTEASIVKAA--AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKD 146
            P+  P  ++  I K A  +G  H +A+T+ G++++WG  E        G L  G  +  D
Sbjct: 3330 PKLIPFLSQYMIKKVAVHSGGKHALALTQDGKIFSWGEGE-------DGKLGHGNSVSLD 3382

Query: 147  VFERQSSFLTEQVSPRSQVS-RSSGGTSSGTDGR-GSGEEGSKRRRISLAKQTAESSSSG 204
                  S  ++++   +  S  S+  TSSG     G GE G                  G
Sbjct: 3383 KPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRL--------------GHG 3428

Query: 205  DENLSAFPCLVTLNPGVRIATVAAGGR--HTLALSDIGQVWGWGYGGEGQLGLGSRIRMV 262
            D      P LV    G R+  VA G R   T+AL+  G V+ WG G  G+LG G      
Sbjct: 3429 DTATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRG------ 3482

Query: 263  SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITDAGA 320
                                   GS     P    R+ G  V  I CG + S  +T  G 
Sbjct: 3483 -----------------------GSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGE 3519

Query: 321  LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
            + T+G G Y + G G+      P  V  L G ++  VA G  H + ++  G VYA+G N 
Sbjct: 3520 VWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVVHVAVGALHCLAVTDTGQVYAWGDND 3579

Query: 381  FGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
             GQ G G       P L+    L++     VSCG+ H+
Sbjct: 3580 HGQQGNGSTIVNKKPSLVH--ELDDARVNRVSCGSSHS 3615



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 101/218 (46%), Gaps = 29/218 (13%)

Query: 226  VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
            +A G +    +S  G+++  G G  G+LGLG     V  P  IP + S Y   + A  S 
Sbjct: 3292 IAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSN-VCEPKLIPFL-SQYMIKKVAVHS- 3348

Query: 286  GSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNC 345
                                  GG+H+  +T  G + ++G G  G+ G G++     P  
Sbjct: 3349 ----------------------GGKHALALTQDGKIFSWGEGEDGKLGHGNSVSLDKPRL 3386

Query: 346  VSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLEN 405
            + SL   +I  +A G  H+  I+S G++Y +G  ++G+LG G    +  P+L+   SL  
Sbjct: 3387 IESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQMKPKLVQ--SLVG 3444

Query: 406  VHSKSVSCGAR--HTAVIADDGKVFCWGWNKYGQLGLG 441
                 V+CG+R   T  +  DG V+ WG   +G+LG G
Sbjct: 3445 QRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRG 3482



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 117/256 (45%), Gaps = 32/256 (12%)

Query: 218 NPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI-----RMVSSPHPIPCIE 272
            P   IA+  + G H LAL+    V+ WG G  G+LG G R+     ++V +        
Sbjct: 495 KPVTMIAS-HSDGTHYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKNITF 553

Query: 273 SSYGKDRSAALS---------RGSVNSEGPG----FRVP-------GNYVKGIACGG--R 310
            + G   SA LS         RG+    G G      +P       G+ V  +ACG    
Sbjct: 554 IACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVYVACGSGDS 613

Query: 311 HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
            +  +T +G + ++G G YG+ G+G  D   +P  V  LL I +  V  G   +  +++ 
Sbjct: 614 QTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAY 673

Query: 371 GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
           G+VY +G  +  +LG G ++    P++++    + V  K +  G  H   + +D  V+ W
Sbjct: 674 GEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLKPKKV--KELCVGNFHVLALTEDQLVYGW 731

Query: 431 GWNKYGQL--GLGDVI 444
           G N YGQ+   LG ++
Sbjct: 732 GRNDYGQIDPALGTIV 747



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/164 (31%), Positives = 86/164 (52%), Gaps = 5/164 (3%)

Query: 305  IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA--AGLW 362
            IA G +   V++  G L   G G  G+ G G   +   P  +  L    I+ VA  +G  
Sbjct: 3292 IAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKVAVHSGGK 3351

Query: 363  HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIA 422
            H + ++ DG ++++G  + G+LG G   +   PRL++  SL++   + ++CG+ H+A I 
Sbjct: 3352 HALALTQDGKIFSWGEGEDGKLGHGNSVSLDKPRLIE--SLKSKRIRDIACGSGHSAAIT 3409

Query: 423  DDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
              G+++ WG  +YG+LG GD   +  P  V ++ G     VACG
Sbjct: 3410 SSGELYTWGLGEYGRLGHGDTATQMKPKLVQSLVGQRVIQVACG 3453



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 85/344 (24%), Positives = 133/344 (38%), Gaps = 60/344 (17%)

Query: 25   PQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDD--LGQSYVTS 82
            P+  P LS  +++         +     G   A+A++   K+ +WG  +D  LG     S
Sbjct: 3330 PKLIPFLSQYMIK---------KVAVHSGGKHALALTQDGKIFSWGEGEDGKLGHGNSVS 3380

Query: 83   GKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTG 142
                 + E         I   A G  H  A+T  GE+YTWG  E    GR  G   T T 
Sbjct: 3381 LDKPRLIESL---KSKRIRDIACGSGHSAAITSSGELYTWGLGE---YGR-LGHGDTATQ 3433

Query: 143  LDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGR-GSGEEGSKRRRISLAKQTAESS 201
            +   + +        QV+  S+ +++   T+ G+    G G+ G   R            
Sbjct: 3434 MKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGR------------ 3481

Query: 202  SSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
              G  +    P L+    G+ +  +  G + +LAL+  G+VW WG G   +LG G+    
Sbjct: 3482 --GGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGN---- 3535

Query: 262  VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
                H +          R   L  G          + G  V  +A G  H   +TD G +
Sbjct: 3536 ---DHHV----------RKPTLVEG----------LRGKKVVHVAVGALHCLAVTDTGQV 3572

Query: 322  LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTI 365
              +G   +GQ G GST     P+ V  L   ++  V+ G  H+I
Sbjct: 3573 YAWGDNDHGQQGNGSTIVNKKPSLVHELDDARVNRVSCGSSHSI 3616



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 64/125 (51%), Gaps = 4/125 (3%)

Query: 346  VSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLEN 405
            +S L  I I G +  L+    +S +G +YA G    G+LG G D     P+L+   S   
Sbjct: 3284 LSKLKPIHIAGGSKTLF---VVSQEGKLYACGEGTNGRLGLGDDSNVCEPKLIPFLSQYM 3340

Query: 406  VHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVAC 464
            +   +V  G +H   +  DGK+F WG  + G+LG G+ +  + P  + +++    R++AC
Sbjct: 3341 IKKVAVHSGGKHALALTQDGKIFSWGEGEDGKLGHGNSVSLDKPRLIESLKSKRIRDIAC 3400

Query: 465  GWWHT 469
            G  H+
Sbjct: 3401 GSGHS 3405



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 83/165 (50%), Gaps = 11/165 (6%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           +K + C  R   +++ +G +    +G   Q  Q        P    +++    +G     
Sbjct: 455 IKQLCCTERALMILSISGNVYMMYYGSETQYPQRVYGFSEKP---VTMIASHSDGT---- 507

Query: 362 WHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
            H + ++ D  VY++G    G+LG G       P+L++A   +N+    ++CG+ ++AV+
Sbjct: 508 -HYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKNI--TFIACGSTYSAVL 564

Query: 422 ADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACG 465
           + +G+++ WG   YG+LG G+  +  IP+ VT + G +   VACG
Sbjct: 565 SSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVYVACG 609



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 73/153 (47%), Gaps = 1/153 (0%)

Query: 318  AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
            +GA+  +G    GQ G         P    SL  ++   +  G    + +++DG VYA G
Sbjct: 4258 SGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADGKVYATG 4317

Query: 378  GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQ 437
                G+LG GG  +  +P LL++     V   +V+ G +H   ++ +G V+ WG    G+
Sbjct: 4318 YGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGK 4377

Query: 438  LGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            LG G+ +  + P  +  + G    ++ACG  H+
Sbjct: 4378 LGHGNRLMYDRPKLIEELLGTEIVDIACGGHHS 4410



 Score = 42.0 bits (97), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 5/73 (6%)

Query: 53   GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
            G  F++A++ S  + TWG  D   LG     +  H   P          I+  A G  HC
Sbjct: 4512 GSQFSVALTRSGAIYTWGKGDYHRLGHG---TDDHVRRPRKVAALQGKKIISIATGSLHC 4568

Query: 111  VAVTEGGEVYTWG 123
            VA T+ GEV+TWG
Sbjct: 4569 VACTDKGEVFTWG 4581


>gi|73952751|ref|XP_860006.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
           [Canis lupus familiaris]
          Length = 1054

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 110/250 (44%), Gaps = 30/250 (12%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
            I  V+ G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +          
Sbjct: 85  NIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDI------- 137

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDE 340
                               +  +ACG  HS  ++  G    +G   YGQ G G     +
Sbjct: 138 -------------------QIVQVACGYYHSLALSKEGEFFCWGQNKYGQLGLGIDCKKQ 178

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
            SP  + SLLGI    VAAG  H+  ++  G ++ +G N+FGQLG   +    +P LL  
Sbjct: 179 ASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK- 237

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVP 459
            SL       + CG  HTA +  +G VF +G   YGQLG         P +V  + G + 
Sbjct: 238 -SLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 460 RNVACGWWHT 469
             +ACG  HT
Sbjct: 297 TQIACGRQHT 306



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 92/176 (52%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLGT-GGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++ +G+ FCWG NKYGQLGLG    +    Q+  ++ G     VA G  H+ +L +
Sbjct: 152 LSKEGEFFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      +  ++  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 439 GL-----GDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALS 153



 Score = 38.5 bits (88), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 55/234 (23%), Positives = 92/234 (39%), Gaps = 39/234 (16%)

Query: 36  VRLPLTVGSAWR-DVCGGGCGF--AMAISDSRKLITWGSTDDLGQSYV-TSGKHGEIPEP 91
           +R+P  + S     +    CG+  ++A+S   +   WG  +  GQ  +    K    P+ 
Sbjct: 125 IRVPRNIKSLSDIQIVQVACGYYHSLALSKEGEFFCWGQ-NKYGQLGLGIDCKKQASPQL 183

Query: 92  FPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQ 151
                    ++ AAG AH   +T  G ++ WG  +       FG L      D+ V    
Sbjct: 184 IKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNK-------FGQLGLNDENDRYVPNLL 236

Query: 152 SSFLTEQV-------SPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSG 204
            S  T+++          + +++  G  + G  G G               Q   +S+S 
Sbjct: 237 KSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYG---------------QLGHNSTSH 281

Query: 205 DENLSAFPCLVTLNPGVRIATVAAGGRHTLAL-SDIGQVWGWGYGGEGQLGLGS 257
           + N    P  V    G  +  +A G +HT A     G+++ +G GG GQLG GS
Sbjct: 282 EIN----PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331


>gi|449504701|ref|XP_002190698.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Taeniopygia
           guttata]
          Length = 991

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/249 (32%), Positives = 114/249 (45%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  HTLAL+D GQV+ WG   +GQLGL      V  P  I          RS +
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECVRVPRNI----------RSLS 135

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDEL 341
             +                +  +ACG  HS  ++    + ++G   YGQ G G     + 
Sbjct: 136 EIQ----------------IVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQT 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  + SLLGI    +AAG  H+  ++  G ++ +G N+FGQLG   D    +P LL   
Sbjct: 180 SPQMIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLK-- 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL +     + CG  HTA +  +G VF +G   YGQLG         P +V  + G V  
Sbjct: 238 SLRSQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSVVT 297

Query: 461 NVACGWWHT 469
            + CG  HT
Sbjct: 298 QITCGRQHT 306



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 100/355 (28%), Positives = 145/355 (40%), Gaps = 75/355 (21%)

Query: 47  RDVCGGGCGF--AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           RDV   GCG    + + D   + T G  +DLGQ  +   K  + PE        +IV  +
Sbjct: 37  RDV---GCGLRHTVFVLDDGTVYTCGC-NDLGQ--LGHEKARKRPEHVGALDAQNIVAVS 90

Query: 105 AGWAHCVAVTEGGEVYTWGW-----------KECVPSGRVFGDLSTGTGLDKDVFERQSS 153
            G AH +A+ + G+VY WG            +ECV   R    LS               
Sbjct: 91  CGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECVRVPRNIRSLSEI------------- 137

Query: 154 FLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPC 213
               Q+   +     S   S G++    G+  +K  ++ L  +  + +S         P 
Sbjct: 138 ----QIVQVACGYYHSLALSKGSEVFSWGQ--NKYGQLGLGYEYKKQTS---------PQ 182

Query: 214 LVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES 273
           ++    G+  A +AAGG H+  L+  G ++GWG    GQLGL                  
Sbjct: 183 MIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND---------------- 226

Query: 274 SYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCG 333
               DR       S+ S+          V  I CG  H+A +T  G + TFG G YGQ G
Sbjct: 227 --DNDRYVPTLLKSLRSQK---------VVHICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 334 QGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFGGNQFGQLGTG 387
             ST  E++P  V  L+G  +  +  G  HT   + S G +Y+FG    GQLGTG
Sbjct: 276 HNSTSHEINPRKVFELMGSVVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTG 330



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/160 (36%), Positives = 81/160 (50%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      L  ++  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G ++A   P  + A   +N+   +VSCG  HT  + D G+V+ WG    GQL
Sbjct: 61  NDLGQL--GHEKARKRPEHVGALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLATDGQL 116

Query: 439 GLGDV-----IDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLPGTEECVRVPRNIRSLSEIQIV---QVACGYYHSLALS 153



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 73/304 (24%), Positives = 122/304 (40%), Gaps = 48/304 (15%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D       + +   +P      +E  IV+ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECVRVPRNIRSLSEIQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++G EV++WG  +       +G L  G    K    +    L     P +Q
Sbjct: 144 CGYYHSLALSKGSEVFSWGQNK-------YGQLGLGYEYKKQTSPQMIKSLLG--IPFAQ 194

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           +  ++GG  S          G  R +              D+N    P L+      ++ 
Sbjct: 195 I--AAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDDNDRYVPTLLKSLRSQKVV 245

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +                
Sbjct: 246 HICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 288

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                     F + G+ V  I CG +H +A +  +G + +FG G  GQ G G+T +  SP
Sbjct: 289 ----------FELMGSVVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSP 338

Query: 344 NCVS 347
             V 
Sbjct: 339 FTVK 342


>gi|340711630|ref|XP_003394376.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase
            HERC2-like [Bombus terrestris]
          Length = 5151

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 124/251 (49%), Gaps = 32/251 (12%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GG+H LALS  G V+ WG G +G+LG G+R+ M   P  I            
Sbjct: 4379 VKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRL-MYDRPKLIE----------- 4426

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                            + G  +  IACGG HSA IT AG L T+G G YG+ G G ++D+
Sbjct: 4427 ---------------ELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQ 4471

Query: 341  LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L+P  V +L   ++  VA  +G   T+C++ D +V+++G   +G+LG GG     +P  +
Sbjct: 4472 LTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKIP--M 4529

Query: 399  DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGC 457
               SL  +    V CG++ +  +   G ++ WG   Y +LG G       P +V  ++G 
Sbjct: 4530 KIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVRRPRKVAALQGK 4589

Query: 458  VPRNVACGWWH 468
               ++A G  H
Sbjct: 4590 KIISIATGSLH 4600



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 131/303 (43%), Gaps = 80/303 (26%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            ++   V +GG+H LAL+  G+++ WG G +G+LG G+ + +   P  I  ++S   +D  
Sbjct: 3346 IKKMAVHSGGKHALALTQDGKIFSWGEGEDGKLGHGNSVSL-DKPRLIESLKSKRIRD-- 3402

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                    IACG  HSA IT +G L T+G G YG+ G G T  +
Sbjct: 3403 ------------------------IACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQ 3438

Query: 341  LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            + P  V SL+G ++  VA G     T+ +++DG VY++G   FG+LG GG      P L+
Sbjct: 3439 MKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGGSDGCYTPLLI 3498

Query: 399  D----------------------------------------------APSL-ENVHSKSV 411
            D                                               P+L E +  K V
Sbjct: 3499 DRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKV 3558

Query: 412  ---SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWW 467
               + GA H   + D G+V+ WG N +GQ G G  I    PS V  ++      V+CG  
Sbjct: 3559 VHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGSTIVNKKPSLVHELDDARVNRVSCGSS 3618

Query: 468  HTL 470
            H++
Sbjct: 3619 HSI 3621



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 97/326 (29%), Positives = 135/326 (41%), Gaps = 62/326 (19%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFL-TEQV 159
            V   +G  HC+A++  G VY+WG  +        G L  G  L  D  +     L TE V
Sbjct: 4382 VAVNSGGKHCLALSSEGHVYSWGEGD-------DGKLGHGNRLMYDRPKLIEELLGTEIV 4434

Query: 160  SPRSQVSRSSGGTSSG---TDGRGS-GEEGSKRRRISLAKQTAESSSSGDENLSAFPCLV 215
                    S+  TS+G   T G+G  G  G                  GD      P LV
Sbjct: 4435 DIACGGHHSAAITSAGWLYTWGKGRYGRLGH-----------------GDSEDQLTPKLV 4477

Query: 216  TLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPC-IE 272
                  ++  VA  +G   TL ++D   VW WG G  G+LG G      S    IP  IE
Sbjct: 4478 EALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGG-----SDGCKIPMKIE 4532

Query: 273  SSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQC 332
            S                       + G  V  + CG + S  +T +GA+ T+G G Y + 
Sbjct: 4533 S-----------------------LAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRL 4569

Query: 333  GQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAE 392
            G G+ D    P  V++L G +I  +A G  H +  +  G+V+ +G N  GQLG G   A 
Sbjct: 4570 GHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSAL 4629

Query: 393  TLPRLLDAPSLENVHSKSVSCGARHT 418
              PRL+ A  L+      V+CG+ HT
Sbjct: 4630 QRPRLVHA--LQGKKITRVACGSAHT 4653



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 120/258 (46%), Gaps = 30/258 (11%)

Query: 211  FPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPC 270
             P L      +R   +  G +  LA++  G+V+  GYG  G+LG+G     V  P  +  
Sbjct: 4315 LPVLCESLSALRPVQLTGGEQTLLAVTADGKVYATGYGAAGRLGIGG-TDSVMVPTLLES 4373

Query: 271  IESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
            I+  + K       + +VNS                 GG+H   ++  G + ++G G  G
Sbjct: 4374 IQHVFVK-------KVAVNS-----------------GGKHCLALSSEGHVYSWGEGDDG 4409

Query: 331  QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            + G G+      P  +  LLG +I  +A G  H+  I+S G +Y +G  ++G+LG G  +
Sbjct: 4410 KLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSE 4469

Query: 391  AETLPRLLDAPSLENVHSKSVSCGA--RHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNI 448
             +  P+L++A  L++     V+CG+    T  + DD  V+ WG   YG+LG G      I
Sbjct: 4470 DQLTPKLVEA--LQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKI 4527

Query: 449  PSQV-TIEGCVPRNVACG 465
            P ++ ++ G     V CG
Sbjct: 4528 PMKIESLAGLGVIKVECG 4545



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 157/400 (39%), Gaps = 81/400 (20%)

Query: 89   PEPFPLPTEASIVKAA--AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKD 146
            P+  P  ++  I K A  +G  H +A+T+ G++++WG  E        G L  G  +  D
Sbjct: 3335 PKLIPFLSQYMIKKMAVHSGGKHALALTQDGKIFSWGEGE-------DGKLGHGNSVSLD 3387

Query: 147  VFERQSSFLTEQVSPRSQVS-RSSGGTSSGTDGR-GSGEEGSKRRRISLAKQTAESSSSG 204
                  S  ++++   +  S  S+  TSSG     G GE G                  G
Sbjct: 3388 KPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRL--------------GHG 3433

Query: 205  DENLSAFPCLVTLNPGVRIATVAAGGR--HTLALSDIGQVWGWGYGGEGQLGLGSRIRMV 262
            D      P LV    G R+  VA G R   T+AL+  G V+ WG G  G+LG G      
Sbjct: 3434 DTATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRG------ 3487

Query: 263  SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITDAGA 320
                                   GS     P    R+ G  V  I CG + S  +T  G 
Sbjct: 3488 -----------------------GSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGE 3524

Query: 321  LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
            + T+G G Y + G G+      P  V  L G ++  VA G  H + ++  G VYA+G N 
Sbjct: 3525 VWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVVHVAVGALHCLAVTDTGQVYAWGDND 3584

Query: 381  FGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA--VIAD-------DGKVFCWG 431
             GQ G G       P L+    L++     VSCG+ H+   V+ D       +  +F   
Sbjct: 3585 HGQQGNGSTIVNKKPSLVH--ELDDARVNRVSCGSSHSIAWVLTDQPATNNQEPVMFPTE 3642

Query: 432  WNKYGQLGL---------GDVIDRN---IPSQVTIEGCVP 459
             +  GQ+ L          D  D N   +PS  TI   +P
Sbjct: 3643 KDPLGQISLTFKSIVNHGTDTTDSNGCPVPSCSTISSTIP 3682



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 101/218 (46%), Gaps = 29/218 (13%)

Query: 226  VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
            +A G +    +S  G+++  G G  G+LGLG     V  P  IP + S Y   + A  S 
Sbjct: 3297 IAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSN-VCEPKLIPFL-SQYMIKKMAVHS- 3353

Query: 286  GSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNC 345
                                  GG+H+  +T  G + ++G G  G+ G G++     P  
Sbjct: 3354 ----------------------GGKHALALTQDGKIFSWGEGEDGKLGHGNSVSLDKPRL 3391

Query: 346  VSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLEN 405
            + SL   +I  +A G  H+  I+S G++Y +G  ++G+LG G    +  P+L+   SL  
Sbjct: 3392 IESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQMKPKLVQ--SLVG 3449

Query: 406  VHSKSVSCGAR--HTAVIADDGKVFCWGWNKYGQLGLG 441
                 V+CG+R   T  +  DG V+ WG   +G+LG G
Sbjct: 3450 QRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRG 3487



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 117/256 (45%), Gaps = 32/256 (12%)

Query: 218 NPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI-----RMVSSPHPIPCIE 272
            P   IA+  + G H LAL+    V+ WG G  G+LG G R+     ++V +        
Sbjct: 503 KPVTMIAS-HSDGTHYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKNITF 561

Query: 273 SSYGKDRSAALS---------RGSVNSEGPG----FRVP-------GNYVKGIACGG--R 310
            + G   SA LS         RG+    G G      +P       G+ V  +ACG    
Sbjct: 562 IACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVHVACGSGDS 621

Query: 311 HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
            +  +T +G + ++G G YG+ G+G  D   +P  V  LL I +  V  G   +  +++ 
Sbjct: 622 QTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAY 681

Query: 371 GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
           G+VY +G  +  +LG G ++    P++++    + V  K +  G  H   + +D  V+ W
Sbjct: 682 GEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLXTKKV--KELCVGNFHVLALTEDQLVYGW 739

Query: 431 GWNKYGQL--GLGDVI 444
           G N YGQ+   LG V+
Sbjct: 740 GRNDYGQIDPALGTVV 755



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 86/164 (52%), Gaps = 5/164 (3%)

Query: 305  IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA--AGLW 362
            IA G +   V++  G L   G G  G+ G G   +   P  +  L    I+ +A  +G  
Sbjct: 3297 IAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKMAVHSGGK 3356

Query: 363  HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIA 422
            H + ++ DG ++++G  + G+LG G   +   PRL++  SL++   + ++CG+ H+A I 
Sbjct: 3357 HALALTQDGKIFSWGEGEDGKLGHGNSVSLDKPRLIE--SLKSKRIRDIACGSGHSAAIT 3414

Query: 423  DDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
              G+++ WG  +YG+LG GD   +  P  V ++ G     VACG
Sbjct: 3415 SSGELYTWGLGEYGRLGHGDTATQMKPKLVQSLVGQRVIQVACG 3458



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 64/125 (51%), Gaps = 4/125 (3%)

Query: 346  VSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLEN 405
            +S L  I I G +  L+    +S +G +YA G    G+LG G D     P+L+   S   
Sbjct: 3289 LSKLKPIHIAGGSKTLF---VVSQEGKLYACGEGTNGRLGLGDDSNVCEPKLIPFLSQYM 3345

Query: 406  VHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVAC 464
            +   +V  G +H   +  DGK+F WG  + G+LG G+ +  + P  + +++    R++AC
Sbjct: 3346 IKKMAVHSGGKHALALTQDGKIFSWGEGEDGKLGHGNSVSLDKPRLIESLKSKRIRDIAC 3405

Query: 465  GWWHT 469
            G  H+
Sbjct: 3406 GSGHS 3410



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 84/165 (50%), Gaps = 11/165 (6%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           +K + C  R   +++ +G +    +G   Q  Q        P    +++    +G     
Sbjct: 463 IKQLCCTERALMILSISGNVYMMYYGSETQYPQRVYGFSEKP---VTMIASHSDGT---- 515

Query: 362 WHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
            H + ++ D  VY++G    G+LG G       P+L++A   +N+    ++CG+ ++AV+
Sbjct: 516 -HYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKNI--TFIACGSTYSAVL 572

Query: 422 ADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACG 465
           + +G+++ WG   YG+LG G+  +  IP+ VT + G +  +VACG
Sbjct: 573 SSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVHVACG 617



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 73/153 (47%), Gaps = 1/153 (0%)

Query: 318  AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
            +GA+  +G    GQ G         P    SL  ++   +  G    + +++DG VYA G
Sbjct: 4291 SGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADGKVYATG 4350

Query: 378  GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQ 437
                G+LG GG  +  +P LL++     V   +V+ G +H   ++ +G V+ WG    G+
Sbjct: 4351 YGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGK 4410

Query: 438  LGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            LG G+ +  + P  +  + G    ++ACG  H+
Sbjct: 4411 LGHGNRLMYDRPKLIEELLGTEIVDIACGGHHS 4443



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 86/200 (43%), Gaps = 27/200 (13%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMV--------- 262
           P LV       I  +A G  ++  LS  G+++ WG G  G+LG G+   ++         
Sbjct: 548 PKLVEALVDKNITFIACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALN 607

Query: 263 ----------SSPHPIPCIESS-----YGKDRSAALSRGSVN-SEGPGF--RVPGNYVKG 304
                     S      C+ +S     +G      L RG  + S+ P    ++    V  
Sbjct: 608 GHMVVHVACGSGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAK 667

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           + CGG+ SA +T  G + T+G G   + G G+ +    P  +  L   +++ +  G +H 
Sbjct: 668 VYCGGQFSAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLXTKKVKELCVGNFHV 727

Query: 365 ICISSDGDVYAFGGNQFGQL 384
           + ++ D  VY +G N +GQ+
Sbjct: 728 LALTEDQLVYGWGRNDYGQI 747



 Score = 42.0 bits (97), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 5/73 (6%)

Query: 53   GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
            G  F++A++ S  + TWG  D   LG     +  H   P          I+  A G  HC
Sbjct: 4545 GSQFSVALTRSGAIYTWGKGDYHRLGHG---TDDHVRRPRKVAALQGKKIISIATGSLHC 4601

Query: 111  VAVTEGGEVYTWG 123
            VA T+ GEV+TWG
Sbjct: 4602 VACTDKGEVFTWG 4614


>gi|426364914|ref|XP_004049536.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Gorilla gorilla gorilla]
          Length = 979

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 113/249 (45%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +           
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQ------- 138

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDEL 341
                              +  +ACG  HS  ++ A  +  +G   YGQ G G+    + 
Sbjct: 139 -------------------IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQT 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  + SLLGI    VAAG  H+  ++  G ++ +G N+FGQLG   +    +P LL   
Sbjct: 180 SPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK-- 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL +     + CG  HTA +  +G VF +G   YGQLG         P +V  + G +  
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297

Query: 461 NVACGWWHT 469
            +ACG  HT
Sbjct: 298 EIACGRQHT 306



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/235 (31%), Positives = 109/235 (46%), Gaps = 33/235 (14%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++I  VA G  H+LALS   +V+ WG    GQLGLG+  +  +SP     ++S  G    
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQ---LLKSLLG---- 189

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTD 338
                           +P      +A GG HS V+T +GA+  FGWG   +GQ G    +
Sbjct: 190 ----------------IP---FMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDEN 228

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D   PN + SL   +I  +  G  HT  ++ +G V+ FG   +GQLG      E  PR  
Sbjct: 229 DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR-- 286

Query: 399 DAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
               L       ++CG +HT A +   G+++ +G    GQLG G   +R  P  V
Sbjct: 287 KVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           ++ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  IRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLG-TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VFCWG NKYGQLGLG    +    Q+  ++ G     VA G  H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      +  +I  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 439 GLGDV-----IDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALS 153



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 124/304 (40%), Gaps = 48/304 (15%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D     V S +   +P      ++  IV+ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++  EV+ WG  +       +G L  GT    D  ++ S  L + +     
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK-------YGQLGLGT----DCKKQTSPQLLKSLLGIPF 192

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           +  ++GG  S          G  R +              DEN    P L+      +I 
Sbjct: 193 MQVAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRSQKIV 245

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +                
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 288

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                     F + G+ V  IACG +H SA +  +G + +FG G  GQ G GST +  SP
Sbjct: 289 ----------FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 344 NCVS 347
             V 
Sbjct: 339 FTVK 342


>gi|397520491|ref|XP_003830350.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Pan paniscus]
 gi|410221280|gb|JAA07859.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410259924|gb|JAA17928.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1049

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 113/249 (45%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +           
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQ------- 138

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDEL 341
                              +  +ACG  HS  ++ A  +  +G   YGQ G G+    + 
Sbjct: 139 -------------------IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQT 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  + SLLGI    VAAG  H+  ++  G ++ +G N+FGQLG   +    +P LL   
Sbjct: 180 SPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK-- 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL +     + CG  HTA +  +G VF +G   YGQLG         P +V  + G +  
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297

Query: 461 NVACGWWHT 469
            +ACG  HT
Sbjct: 298 QIACGRQHT 306



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/235 (31%), Positives = 109/235 (46%), Gaps = 33/235 (14%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++I  VA G  H+LALS   +V+ WG    GQLGLG+  +  +SP     ++S  G    
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQ---LLKSLLG---- 189

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTD 338
                           +P      +A GG HS V+T +GA+  FGWG   +GQ G    +
Sbjct: 190 ----------------IP---FMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDEN 228

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D   PN + SL   +I  +  G  HT  ++ +G V+ FG   +GQLG      E  PR  
Sbjct: 229 DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR-- 286

Query: 399 DAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
               L       ++CG +HT A +   G+++ +G    GQLG G   +R  P  V
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLG-TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VFCWG NKYGQLGLG    +    Q+  ++ G     VA G  H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      +  ++  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 439 GLGDV-----IDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALS 153



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 124/304 (40%), Gaps = 48/304 (15%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D     V S +   +P      ++  IV+ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++  EV+ WG  +       +G L  GT    D  ++ S  L + +     
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK-------YGQLGLGT----DCKKQTSPQLLKSLLGIPF 192

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           +  ++GG  S          G  R +              DEN    P L+      +I 
Sbjct: 193 MQVAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRSQKIV 245

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +                
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 288

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                     F + G+ V  IACG +H SA +  +G + +FG G  GQ G GST +  SP
Sbjct: 289 ----------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 344 NCVS 347
             V 
Sbjct: 339 FTVK 342


>gi|402869932|ref|XP_003898997.1| PREDICTED: LOW QUALITY PROTEIN: E3 ISG15--protein ligase HERC5
           [Papio anubis]
          Length = 1023

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 86/278 (30%), Positives = 131/278 (47%), Gaps = 36/278 (12%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI------PCIESSY 275
           +I  +  G  H+LALS  G+++ WG    GQLG+G +    ++P  +      P  + S 
Sbjct: 138 KIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISA 197

Query: 276 GKDRSAALSR-GSVNS-----------------EGPGF--RVPGNYVKGIACGGRHSAVI 315
           G+  S ALS  G+V S                 + P     +    V+ +ACGG HSA++
Sbjct: 198 GEAHSMALSMSGNVYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGSHSALL 257

Query: 316 TDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD-GDVY 374
           T  G L TFG G +GQ G  ST +EL P  V+ L+G ++  +A G WHT+   SD G V+
Sbjct: 258 TQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYVSDLGKVF 317

Query: 375 AFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNK 434
           +FG  + GQLG GG   + +P  +   S E +  +S +       +   +  +  W   +
Sbjct: 318 SFGSGKDGQLGNGGTLDQLIPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWIKKE 377

Query: 435 YGQLGLGDVIDRNIPSQVTIEGCVPR---NVACGWWHT 469
              + L     R IP+    EG V R   +V    WH+
Sbjct: 378 NSYVNL----KRTIPT--LNEGTVKRWIADVETKRWHS 409



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/221 (32%), Positives = 111/221 (50%), Gaps = 7/221 (3%)

Query: 252 QLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRH 311
           +LG   +I  V        I SS GK      S   + SE     +    +  I CG  H
Sbjct: 92  KLGKNMKIHSVDQGADHMLILSSDGKPFEYDYSMKHLRSESI---LQEKKIIQITCGDYH 148

Query: 312 SAVITDAGALLTFGWGLYGQCGQGST-DDELSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
           S  ++  G L  +G  L+GQ G G       +P  V  L G+ +  ++AG  H++ +S  
Sbjct: 149 SLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMS 208

Query: 371 GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
           G+VY++G N+FGQLG G  +++  P L++A  L+N   + ++CG  H+A++  DG +F +
Sbjct: 209 GNVYSWGKNEFGQLGLGHTESKDSPSLIEA--LDNQKVEFLACGGSHSALLTQDGLLFTF 266

Query: 431 GWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
           G  K+GQLG     +   P  V  + G     +ACG WHTL
Sbjct: 267 GAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTL 307



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 71/249 (28%), Positives = 105/249 (42%), Gaps = 61/249 (24%)

Query: 47  RDVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGE--IPEPFPLPTEASIV- 101
           + +    CG   ++A+S   +L  WG              HG+  +   FP  T   IV 
Sbjct: 137 KKIIQITCGDYHSLALSKGGELFAWGQ-----------NLHGQLGVGRKFPSTTTPQIVE 185

Query: 102 --------KAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSS 153
                   + +AG AH +A++  G VY+WG  E       FG L  G    KD     S 
Sbjct: 186 HLAGVPLAQISAGEAHSMALSMSGNVYSWGKNE-------FGQLGLGHTESKD-----SP 233

Query: 154 FLTEQVSPRSQVSRSSGGTSSG---TDGR----GSGEEGSKRRRISLAKQTAESSSSGDE 206
            L E +  +     + GG+ S     DG     G+G+ G          Q   +S+  + 
Sbjct: 234 SLIEALDNQKVEFLACGGSHSALLTQDGLLFTFGAGKHG----------QLGHNSTQNEL 283

Query: 207 NLSAFPCLVTLNPGVRIATVAAGGRHTLA-LSDIGQVWGWGYGGEGQLGLGSRIRMVSSP 265
                PCLV    G R+  +A G  HTLA +SD+G+V+ +G G +GQLG G  +  +   
Sbjct: 284 R----PCLVAELVGNRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTLDQLI-- 337

Query: 266 HPIPCIESS 274
            P+P   SS
Sbjct: 338 -PLPVKVSS 345



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 86/213 (40%), Gaps = 50/213 (23%)

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
           + I C  R  AV+   GA +     L G  G  +      P C+     ++I  V  G  
Sbjct: 54  RQICCSPRRLAVLERGGAGVQVHQVLAGSGGART------PKCIKLGKNMKIHSVDQGAD 107

Query: 363 HTICISSD----------------------------------------GDVYAFGGNQFG 382
           H + +SSD                                        G+++A+G N  G
Sbjct: 108 HMLILSSDGKPFEYDYSMKHLRSESILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHG 167

Query: 383 QLGTGGD-QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
           QLG G    + T P++++   L  V    +S G  H+  ++  G V+ WG N++GQLGLG
Sbjct: 168 QLGVGRKFPSTTTPQIVE--HLAGVPLAQISAGEAHSMALSMSGNVYSWGKNEFGQLGLG 225

Query: 442 DVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLA 473
               ++ PS +  ++      +ACG  H+ LL 
Sbjct: 226 HTESKDSPSLIEALDNQKVEFLACGGSHSALLT 258


>gi|114630758|ref|XP_001167783.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
           [Pan troglodytes]
 gi|410295450|gb|JAA26325.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410333083|gb|JAA35488.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1049

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 113/249 (45%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +           
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQ------- 138

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDEL 341
                              +  +ACG  HS  ++ A  +  +G   YGQ G G+    + 
Sbjct: 139 -------------------IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQT 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  + SLLGI    VAAG  H+  ++  G ++ +G N+FGQLG   +    +P LL   
Sbjct: 180 SPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK-- 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL +     + CG  HTA +  +G VF +G   YGQLG         P +V  + G +  
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297

Query: 461 NVACGWWHT 469
            +ACG  HT
Sbjct: 298 QIACGRQHT 306



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/235 (31%), Positives = 109/235 (46%), Gaps = 33/235 (14%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++I  VA G  H+LALS   +V+ WG    GQLGLG+  +  +SP     ++S  G    
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQ---LLKSLLG---- 189

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTD 338
                           +P      +A GG HS V+T +GA+  FGWG   +GQ G    +
Sbjct: 190 ----------------IP---FMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDEN 228

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D   PN + SL   +I  +  G  HT  ++ +G V+ FG   +GQLG      E  PR  
Sbjct: 229 DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR-- 286

Query: 399 DAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
               L       ++CG +HT A +   G+++ +G    GQLG G   +R  P  V
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLG-TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VFCWG NKYGQLGLG    +    Q+  ++ G     VA G  H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      +  ++  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 439 GLGDV-----IDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALS 153



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 124/304 (40%), Gaps = 48/304 (15%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D     V S +   +P      ++  IV+ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++  EV+ WG  +       +G L  GT    D  ++ S  L + +     
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK-------YGQLGLGT----DCKKQTSPQLLKSLLGIPF 192

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           +  ++GG  S          G  R +              DEN    P L+      +I 
Sbjct: 193 MQVAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRSQKIV 245

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +                
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 288

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                     F + G+ V  IACG +H SA +  +G + +FG G  GQ G GST +  SP
Sbjct: 289 ----------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 344 NCVS 347
             V 
Sbjct: 339 FTVK 342


>gi|357520079|ref|XP_003630328.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355524350|gb|AET04804.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 316

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 59/173 (34%), Positives = 100/173 (57%), Gaps = 3/173 (1%)

Query: 299 GNYVKGIACGGRHSAVITDAGA-LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGV 357
           G  +  + CG  ++   + +G  + ++GWG +G+ G G   D   P+ + +L G++I+ +
Sbjct: 100 GQDIVSVTCGADYTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQI 159

Query: 358 AAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARH 417
           + G  H + ++ +  V ++G NQ G+LG G  +   +P+ + A   E +  K V+ GA H
Sbjct: 160 SCGDCHCLAVTMENKVLSWGRNQNGELGLGTTKDSHVPQKILA--FEGIRIKMVAAGAEH 217

Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTL 470
           +  I +DG ++ WGW +YG LGLGD  DR IP +V I+G     V+CGW HT+
Sbjct: 218 SVAITEDGDLYGWGWGRYGNLGLGDTNDRLIPEKVNIDGDKIVMVSCGWRHTI 270



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 81/250 (32%), Positives = 123/250 (49%), Gaps = 31/250 (12%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQ-VWGWGYGGEGQLGLGSRIRMV 262
           GD +    P  ++   G  I +V  G  +T+A S  G+ V+ WG+G  G+LG G    + 
Sbjct: 84  GDTDDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGWGDFGRLGHGDPSDLF 143

Query: 263 SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL 322
             PHPI  ++                     G R+     K I+CG  H   +T    +L
Sbjct: 144 I-PHPIRALQ---------------------GLRI-----KQISCGDCHCLAVTMENKVL 176

Query: 323 TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFG 382
           ++G    G+ G G+T D   P  + +  GI+I+ VAAG  H++ I+ DGD+Y +G  ++G
Sbjct: 177 SWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYG 236

Query: 383 QLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGD 442
            LG G      +P  ++    + V    VSCG RHT  I+  G ++  GW+KYGQLG GD
Sbjct: 237 NLGLGDTNDRLIPEKVNIDGDKIV---MVSCGWRHTISISSSGGLYTHGWSKYGQLGHGD 293

Query: 443 VIDRNIPSQV 452
             D  +P +V
Sbjct: 294 FEDCLVPRKV 303



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 115/272 (42%), Gaps = 55/272 (20%)

Query: 85  HGEIPEPFPLPTEAS------IVKAAAGWAHCVAVTEGG-EVYTWGWKECVPSGRVFGDL 137
           HG+  +   LPT+ S      IV    G  + VA ++ G +VY+WGW +       FG L
Sbjct: 83  HGDTDDRL-LPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGWGD-------FGRL 134

Query: 138 STGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQT 197
             G G   D+F        + +  + Q+S       + T          + + +S  +  
Sbjct: 135 --GHGDPSDLFIPHPIRALQGLRIK-QISCGDCHCLAVT---------MENKVLSWGRNQ 182

Query: 198 AESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS 257
                 G    S  P  +    G+RI  VAAG  H++A+++ G ++GWG+G  G LGLG 
Sbjct: 183 NGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLG- 241

Query: 258 RIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITD 317
                               D +  L    VN       + G+ +  ++CG RH+  I+ 
Sbjct: 242 --------------------DTNDRLIPEKVN-------IDGDKIVMVSCGWRHTISISS 274

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSL 349
           +G L T GW  YGQ G G  +D L P  V +L
Sbjct: 275 SGGLYTHGWSKYGQLGHGDFEDCLVPRKVQAL 306



 Score = 44.7 bits (104), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 66/140 (47%), Gaps = 14/140 (10%)

Query: 14  VFMWGYLP-GALPQRSPILSPLVVRLPLTV--GSAWRDVCGGGCGFAMAISDSRKLITWG 70
           V+ WG+   G L    P  S L +  P+    G   + +  G C   +A++   K+++WG
Sbjct: 123 VYSWGWGDFGRLGHGDP--SDLFIPHPIRALQGLRIKQISCGDC-HCLAVTMENKVLSWG 179

Query: 71  STDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPS 130
              + G+  + + K   +P+         I   AAG  H VA+TE G++Y WGW      
Sbjct: 180 RNQN-GELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGW------ 232

Query: 131 GRVFGDLSTGTGLDKDVFER 150
           GR +G+L  G   D+ + E+
Sbjct: 233 GR-YGNLGLGDTNDRLIPEK 251


>gi|440904419|gb|ELR54939.1| Putative E3 ubiquitin-protein ligase HERC6, partial [Bos grunniens
           mutus]
          Length = 1019

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 89/265 (33%), Positives = 125/265 (47%), Gaps = 40/265 (15%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P L TL+    +A V+ G  H+LA+   G+V+ WG   EGQLG+G        P  I  +
Sbjct: 70  PALETLH----VALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTL 125

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
                                      G  +  +ACG  HS  +++ G + ++G   +GQ
Sbjct: 126 --------------------------AGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQ 159

Query: 332 CGQGST-DDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            G G     + SP  V SL GI +  VAAG  H+  +S  G  + +G N  GQL   G+ 
Sbjct: 160 LGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNNAGQLALSGNN 219

Query: 391 AETLPRLLDAP----SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR 446
           A   P     P    +L+ +   S+SCG +HTAV+  DGKVF +G N YGQLG     ++
Sbjct: 220 A---PVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEK 276

Query: 447 NIPSQVT-IEGCVPRNVACGWWHTL 470
             P  V  IEG V + + CG  HTL
Sbjct: 277 RGPQLVERIEGLVSQ-IDCGSDHTL 300



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 95/347 (27%), Positives = 141/347 (40%), Gaps = 65/347 (18%)

Query: 47  RDVCGGGCGFAMAIS---DSRKLITWGSTDDLGQSYVTSGK-------HGEIPEPFPLPT 96
           R VC GG     A S    S  L++ G+    G +  + G+        GE PE  P   
Sbjct: 16  RQVCAGGNTLLQAASGEHHSLLLLSDGTVQSCGDN--SRGQLGRKGTPRGEQPERIPALE 73

Query: 97  EASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRV-FGDLSTGTGLDKDVFERQSSFL 155
              +   + G  H +AV   G V+ WG       G++  G+    T + K + +  +   
Sbjct: 74  TLHVALVSCGKEHSLAVCHKGRVFAWG---AASEGQLGIGEFKETTFIPKKI-KTLAGIK 129

Query: 156 TEQVS--PRSQVSRSSGGT--SSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAF 211
             QV+      V+ S  G   S GT+  G         ++ L K+    +S         
Sbjct: 130 IIQVACGHYHSVALSEDGQVFSWGTNSHG---------QLGLGKEFPSQAS--------- 171

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P  V    G+ +A VAAGG H+ ALS  G  +GWG    GQL L      V    P+   
Sbjct: 172 PQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNNAGQLALSGNNAPVQRYKPV--- 228

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
                       S G++ + G         V  I+CG +H+AV+T  G + TFG   YGQ
Sbjct: 229 ------------SIGALKTLG---------VVSISCGYKHTAVLTQDGKVFTFGDNSYGQ 267

Query: 332 CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFG 377
            G   T ++  P  V  + G+ +  +  G  HT+  I + G V +FG
Sbjct: 268 LGHDPTAEKRGPQLVERIEGL-VSQIDCGSDHTLAYIYTTGQVVSFG 313


>gi|158259079|dbj|BAF85498.1| unnamed protein product [Homo sapiens]
          Length = 1027

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 113/249 (45%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +           
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQ------- 138

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDEL 341
                              +  +ACG  HS  ++ A  +  +G   YGQ G G+    + 
Sbjct: 139 -------------------IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQT 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  + SLLGI    VAAG  H+  ++  G ++ +G N+FGQLG   +    +P LL   
Sbjct: 180 SPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK-- 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL +     + CG  HTA +  +G VF +G   YGQLG         P +V  + G +  
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297

Query: 461 NVACGWWHT 469
            +ACG  HT
Sbjct: 298 EIACGRQHT 306



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 74/235 (31%), Positives = 109/235 (46%), Gaps = 33/235 (14%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++I  VA G  H+LALS   +V+ WG    GQLGLG+  +  +SP     ++S  G    
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQ---LLKSLLG---- 189

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTD 338
                           +P      +A GG HS V+T +GA+  FGWG   +GQ G    +
Sbjct: 190 ----------------IP---FMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDEN 228

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D   PN + SL   +I  +  G  HT  ++ +G V+ FG   +GQLG      E  PR  
Sbjct: 229 DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR-- 286

Query: 399 DAPSLENVHSKSVSCGARHTA-VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
               L       ++CG +HT+  +   G+++ +G    GQLG G   +R  P  V
Sbjct: 287 KVFELMGSIVTEIACGRQHTSTFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLG-TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VFCWG NKYGQLGLG    +    Q+  ++ G     VA G  H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      +  ++  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 439 GLGDV-----IDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALS 153



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 77/304 (25%), Positives = 123/304 (40%), Gaps = 48/304 (15%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D     V S +   +P      ++  IV+ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++  EV+ WG  +       +G L  GT    D  ++ S  L + +     
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK-------YGQLGLGT----DCKKQTSPQLLKSLLGIPF 192

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           +  ++GG  S          G  R +              DEN    P L+      +I 
Sbjct: 193 MQVAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRSQKIV 245

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +                
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 288

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                     F + G+ V  IACG +H S  +  +G + +FG G  GQ G GST +  SP
Sbjct: 289 ----------FELMGSIVTEIACGRQHTSTFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 344 NCVS 347
             V 
Sbjct: 339 FTVK 342


>gi|397520493|ref|XP_003830351.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Pan paniscus]
 gi|410221282|gb|JAA07860.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410259926|gb|JAA17929.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1057

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 113/249 (45%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +           
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQ------- 138

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDEL 341
                              +  +ACG  HS  ++ A  +  +G   YGQ G G+    + 
Sbjct: 139 -------------------IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQT 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  + SLLGI    VAAG  H+  ++  G ++ +G N+FGQLG   +    +P LL   
Sbjct: 180 SPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK-- 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL +     + CG  HTA +  +G VF +G   YGQLG         P +V  + G +  
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297

Query: 461 NVACGWWHT 469
            +ACG  HT
Sbjct: 298 QIACGRQHT 306



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/235 (31%), Positives = 109/235 (46%), Gaps = 33/235 (14%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++I  VA G  H+LALS   +V+ WG    GQLGLG+  +  +SP     ++S  G    
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQ---LLKSLLG---- 189

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTD 338
                           +P      +A GG HS V+T +GA+  FGWG   +GQ G    +
Sbjct: 190 ----------------IP---FMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDEN 228

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D   PN + SL   +I  +  G  HT  ++ +G V+ FG   +GQLG      E  PR  
Sbjct: 229 DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR-- 286

Query: 399 DAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
               L       ++CG +HT A +   G+++ +G    GQLG G   +R  P  V
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLG-TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VFCWG NKYGQLGLG    +    Q+  ++ G     VA G  H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      +  ++  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 439 GL-----GDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALS 153



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 124/304 (40%), Gaps = 48/304 (15%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D     V S +   +P      ++  IV+ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++  EV+ WG  +       +G L  GT    D  ++ S  L + +     
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK-------YGQLGLGT----DCKKQTSPQLLKSLLGIPF 192

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           +  ++GG  S          G  R +              DEN    P L+      +I 
Sbjct: 193 MQVAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRSQKIV 245

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +                
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 288

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                     F + G+ V  IACG +H SA +  +G + +FG G  GQ G GST +  SP
Sbjct: 289 ----------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 344 NCVS 347
             V 
Sbjct: 339 FTVK 342


>gi|426364910|ref|XP_004049534.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Gorilla gorilla gorilla]
          Length = 1049

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 113/249 (45%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +           
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQ------- 138

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDEL 341
                              +  +ACG  HS  ++ A  +  +G   YGQ G G+    + 
Sbjct: 139 -------------------IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQT 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  + SLLGI    VAAG  H+  ++  G ++ +G N+FGQLG   +    +P LL   
Sbjct: 180 SPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK-- 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL +     + CG  HTA +  +G VF +G   YGQLG         P +V  + G +  
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297

Query: 461 NVACGWWHT 469
            +ACG  HT
Sbjct: 298 EIACGRQHT 306



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/235 (31%), Positives = 109/235 (46%), Gaps = 33/235 (14%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++I  VA G  H+LALS   +V+ WG    GQLGLG+  +  +SP     ++S  G    
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQ---LLKSLLG---- 189

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTD 338
                           +P      +A GG HS V+T +GA+  FGWG   +GQ G    +
Sbjct: 190 ----------------IP---FMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDEN 228

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D   PN + SL   +I  +  G  HT  ++ +G V+ FG   +GQLG      E  PR  
Sbjct: 229 DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR-- 286

Query: 399 DAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
               L       ++CG +HT A +   G+++ +G    GQLG G   +R  P  V
Sbjct: 287 KVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           ++ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  IRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLG-TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VFCWG NKYGQLGLG    +    Q+  ++ G     VA G  H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      +  +I  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 439 GLGDV-----IDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALS 153



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 124/304 (40%), Gaps = 48/304 (15%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D     V S +   +P      ++  IV+ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++  EV+ WG  +       +G L  GT    D  ++ S  L + +     
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK-------YGQLGLGT----DCKKQTSPQLLKSLLGIPF 192

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           +  ++GG  S          G  R +              DEN    P L+      +I 
Sbjct: 193 MQVAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRSQKIV 245

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +                
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 288

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                     F + G+ V  IACG +H SA +  +G + +FG G  GQ G GST +  SP
Sbjct: 289 ----------FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 344 NCVS 347
             V 
Sbjct: 339 FTVK 342


>gi|114630750|ref|XP_001167753.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 8
           [Pan troglodytes]
 gi|410295452|gb|JAA26326.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410333085|gb|JAA35489.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1057

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 113/249 (45%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +           
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQ------- 138

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDEL 341
                              +  +ACG  HS  ++ A  +  +G   YGQ G G+    + 
Sbjct: 139 -------------------IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQT 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  + SLLGI    VAAG  H+  ++  G ++ +G N+FGQLG   +    +P LL   
Sbjct: 180 SPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK-- 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL +     + CG  HTA +  +G VF +G   YGQLG         P +V  + G +  
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297

Query: 461 NVACGWWHT 469
            +ACG  HT
Sbjct: 298 QIACGRQHT 306



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/235 (31%), Positives = 109/235 (46%), Gaps = 33/235 (14%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++I  VA G  H+LALS   +V+ WG    GQLGLG+  +  +SP     ++S  G    
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQ---LLKSLLG---- 189

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTD 338
                           +P      +A GG HS V+T +GA+  FGWG   +GQ G    +
Sbjct: 190 ----------------IP---FMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDEN 228

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D   PN + SL   +I  +  G  HT  ++ +G V+ FG   +GQLG      E  PR  
Sbjct: 229 DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR-- 286

Query: 399 DAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
               L       ++CG +HT A +   G+++ +G    GQLG G   +R  P  V
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLG-TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VFCWG NKYGQLGLG    +    Q+  ++ G     VA G  H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      +  ++  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 439 GL-----GDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALS 153



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 124/304 (40%), Gaps = 48/304 (15%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D     V S +   +P      ++  IV+ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++  EV+ WG  +       +G L  GT    D  ++ S  L + +     
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK-------YGQLGLGT----DCKKQTSPQLLKSLLGIPF 192

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           +  ++GG  S          G  R +              DEN    P L+      +I 
Sbjct: 193 MQVAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRSQKIV 245

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +                
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 288

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                     F + G+ V  IACG +H SA +  +G + +FG G  GQ G GST +  SP
Sbjct: 289 ----------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 344 NCVS 347
             V 
Sbjct: 339 FTVK 342


>gi|291404283|ref|XP_002718505.1| PREDICTED: hect domain and RLD 4 isoform 2 [Oryctolagus cuniculus]
          Length = 1049

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 112/249 (44%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +           
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQ------- 138

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDEL 341
                              +  +ACG  HS  ++ A  +  +G   YGQ G G     + 
Sbjct: 139 -------------------IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQT 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  + SLLGI    VAAG  H+  ++  G ++ +G N+FGQLG   +    +P LL   
Sbjct: 180 SPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK-- 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL +     + CG  HTA +  +G VF +G   YGQLG         P +V  + G +  
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297

Query: 461 NVACGWWHT 469
            +ACG  HT
Sbjct: 298 QIACGRQHT 306



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 115/248 (46%), Gaps = 36/248 (14%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++I  VA G  H+LALS   +V+ WG    GQLGLG   +  +SP     I+S  G    
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQ---LIKSLLG---- 189

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTD 338
                           +P      +A GG HS V+T +GA+  FGWG   +GQ G    +
Sbjct: 190 ----------------IP---FMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDEN 228

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D   PN + SL   +I  +  G  HT  ++ +G V+ FG   +GQLG      E  PR  
Sbjct: 229 DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR-- 286

Query: 399 DAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC 457
               L       ++CG +HT A +   G+++ +G    GQLG G   +R  P   T++G 
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP--FTVKGN 344

Query: 458 -VPRNVAC 464
            +P N  C
Sbjct: 345 WLPYNGQC 352



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLGT-GGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VFCWG NKYGQLGLG    +    Q+  ++ G     VA G  H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      +  ++  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 439 GL-----GDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALS 153



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 77/304 (25%), Positives = 124/304 (40%), Gaps = 48/304 (15%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D     + S +   +P      ++  IV+ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++  EV+ WG  +       +G L    GL  D  ++ S  L + +     
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK-------YGQL----GLGIDCKKQTSPQLIKSLLGIPF 192

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           +  ++GG  S          G  R +              DEN    P L+      +I 
Sbjct: 193 MQVAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRSQKIV 245

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +                
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 288

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                     F + G+ V  IACG +H SA +  +G + +FG G  GQ G GST +  SP
Sbjct: 289 ----------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 344 NCVS 347
             V 
Sbjct: 339 FTVK 342


>gi|291404281|ref|XP_002718504.1| PREDICTED: hect domain and RLD 4 isoform 1 [Oryctolagus cuniculus]
          Length = 1057

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 112/249 (44%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +           
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQ------- 138

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDEL 341
                              +  +ACG  HS  ++ A  +  +G   YGQ G G     + 
Sbjct: 139 -------------------IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQT 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  + SLLGI    VAAG  H+  ++  G ++ +G N+FGQLG   +    +P LL   
Sbjct: 180 SPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK-- 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL +     + CG  HTA +  +G VF +G   YGQLG         P +V  + G +  
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297

Query: 461 NVACGWWHT 469
            +ACG  HT
Sbjct: 298 QIACGRQHT 306



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 115/248 (46%), Gaps = 36/248 (14%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++I  VA G  H+LALS   +V+ WG    GQLGLG   +  +SP     I+S  G    
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQ---LIKSLLG---- 189

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTD 338
                           +P      +A GG HS V+T +GA+  FGWG   +GQ G    +
Sbjct: 190 ----------------IP---FMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDEN 228

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D   PN + SL   +I  +  G  HT  ++ +G V+ FG   +GQLG      E  PR  
Sbjct: 229 DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR-- 286

Query: 399 DAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC 457
               L       ++CG +HT A +   G+++ +G    GQLG G   +R  P   T++G 
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP--FTVKGN 344

Query: 458 -VPRNVAC 464
            +P N  C
Sbjct: 345 WLPYNGQC 352



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLGT-GGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VFCWG NKYGQLGLG    +    Q+  ++ G     VA G  H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      +  ++  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 439 GL-----GDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALS 153



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 77/304 (25%), Positives = 124/304 (40%), Gaps = 48/304 (15%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D     + S +   +P      ++  IV+ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++  EV+ WG  +       +G L    GL  D  ++ S  L + +     
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK-------YGQL----GLGIDCKKQTSPQLIKSLLGIPF 192

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           +  ++GG  S          G  R +              DEN    P L+      +I 
Sbjct: 193 MQVAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRSQKIV 245

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +                
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 288

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                     F + G+ V  IACG +H SA +  +G + +FG G  GQ G GST +  SP
Sbjct: 289 ----------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 344 NCVS 347
             V 
Sbjct: 339 FTVK 342


>gi|37695550|gb|AAR00320.1| HECT E3 ubiquitin ligase [Homo sapiens]
          Length = 1024

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 129/269 (47%), Gaps = 33/269 (12%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI------PCIESSY 275
           +I  +  G  H+LALS  G+++ WG    GQLG+G +    ++P  +      P  + S 
Sbjct: 139 KIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISA 198

Query: 276 GKDRSAALSR-GSVNS-----------------EGPGFR--VPGNYVKGIACGGRHSAVI 315
           G+  S ALS  G++ S                 + P     +    V+ +ACGG HSA++
Sbjct: 199 GEAHSTALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALL 258

Query: 316 TDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD-GDVY 374
           T  G L TFG G +GQ G  ST +EL P  V+ L+G ++  +A G WHT+   SD G V+
Sbjct: 259 TQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVF 318

Query: 375 AFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNK 434
           +FG  + GQLG GG + + +P  +   S E +  +S +       +   +  +  W   +
Sbjct: 319 SFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWIKKE 378

Query: 435 YGQLGLGDVIDRNIPSQVTIEGCVPRNVA 463
              + L     R IP+    EG V R +A
Sbjct: 379 NSYVNL----KRTIPT--LNEGTVKRWIA 401



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 58/168 (34%), Positives = 91/168 (54%), Gaps = 4/168 (2%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDELSPNCVSSLLGIQIEGVAAGLWH 363
           I CG  HS  ++  G L  +G  L+GQ G G       +P  V  L G+ +  ++AG  H
Sbjct: 143 ITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAH 202

Query: 364 TICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
           +  +S  G++Y++G N+ GQLG G  +++  P L++   L+N   + V+CG  H+A++  
Sbjct: 203 STALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEG--LDNQKVEFVACGGSHSALLTQ 260

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
           DG +F +G  K+GQLG     +   P  V  + G     +ACG WHTL
Sbjct: 261 DGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTL 308



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 98/229 (42%), Gaps = 57/229 (24%)

Query: 57  AMAISDSRKLITWGSTDDLGQSYVTSGKHGE--IPEPFPLPTEASIV---------KAAA 105
           ++A+S   +L  WG              HG+  +   FP  T   IV         + +A
Sbjct: 150 SLALSKGGELFAWGQ-----------NLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISA 198

Query: 106 GWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQV 165
           G AH  A++  G +Y+WG  EC       G L  G    KD        L E +  +   
Sbjct: 199 GEAHSTALSMSGNIYSWGKNEC-------GQLGLGHTESKD-----DPSLIEGLDNQKVE 246

Query: 166 SRSSGGTSSG---TDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLN 218
             + GG+ S     DG     G+G+ G          Q   +S+  +      PCLV   
Sbjct: 247 FVACGGSHSALLTQDGLLFTFGAGKHG----------QLGHNSTQNELR----PCLVAEL 292

Query: 219 PGVRIATVAAGGRHTLA-LSDIGQVWGWGYGGEGQLGL-GSRIRMVSSP 265
            G R+  +A G  HTLA +SD+G+V+ +G G +GQLG  G+R +++  P
Sbjct: 293 VGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLP 341



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 101/250 (40%), Gaps = 50/250 (20%)

Query: 97  EASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLT 156
           E  I++   G  H +A+++GGE++ WG         + G L  G           +  + 
Sbjct: 137 EKKIIQITCGDYHSLALSKGGELFAWG-------QNLHGQLGVGRKFPSTT----TPQIV 185

Query: 157 EQVS--PRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCL 214
           E ++  P +Q+S    G +  T    SG   S  +          + S  D      P L
Sbjct: 186 EHLAGVPLAQIS---AGEAHSTALSMSGNIYSWGKNECGQLGLGHTESKDD------PSL 236

Query: 215 VTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESS 274
           +      ++  VA GG H+  L+  G ++ +G G  GQLG  S     +     PC+   
Sbjct: 237 IEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNS-----TQNELRPCLV-- 289

Query: 275 YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHS-AVITDAGALLTFGWGLYGQCG 333
                          +E  G+RV       IACG  H+ A ++D G + +FG G  GQ G
Sbjct: 290 ---------------AELVGYRVT-----QIACGRWHTLAYVSDLGKVFSFGSGKDGQLG 329

Query: 334 QGSTDDELSP 343
            G T D+L P
Sbjct: 330 NGGTRDQLMP 339



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 72/175 (41%), Gaps = 45/175 (25%)

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSD------------------------------- 370
           +P C+     ++I  V  G  H + +SSD                               
Sbjct: 87  TPKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEYDNYSMKHLRFESILQEKKIIQITCG 146

Query: 371 ----------GDVYAFGGNQFGQLGTGGD-QAETLPRLLDAPSLENVHSKSVSCGARHTA 419
                     G+++A+G N  GQLG G    + T P++++   L  V    +S G  H+ 
Sbjct: 147 DYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVE--HLAGVPLAQISAGEAHST 204

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLA 473
            ++  G ++ WG N+ GQLGLG    ++ PS +  ++      VACG  H+ LL 
Sbjct: 205 ALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLT 259


>gi|37620181|ref|NP_056416.2| probable E3 ubiquitin-protein ligase HERC4 isoform b [Homo sapiens]
 gi|24659293|gb|AAH39600.1| Hect domain and RLD 4 [Homo sapiens]
 gi|119574646|gb|EAW54261.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
 gi|119574648|gb|EAW54263.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
 gi|325463745|gb|ADZ15643.1| hect domain and RLD 4 [synthetic construct]
          Length = 1049

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 113/249 (45%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +           
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQ------- 138

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDEL 341
                              +  +ACG  HS  ++ A  +  +G   YGQ G G+    + 
Sbjct: 139 -------------------IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQT 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  + SLLGI    VAAG  H+  ++  G ++ +G N+FGQLG   +    +P LL   
Sbjct: 180 SPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK-- 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL +     + CG  HTA +  +G VF +G   YGQLG         P +V  + G +  
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297

Query: 461 NVACGWWHT 469
            +ACG  HT
Sbjct: 298 EIACGRQHT 306



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/235 (31%), Positives = 109/235 (46%), Gaps = 33/235 (14%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++I  VA G  H+LALS   +V+ WG    GQLGLG+  +  +SP     ++S  G    
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQ---LLKSLLG---- 189

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTD 338
                           +P      +A GG HS V+T +GA+  FGWG   +GQ G    +
Sbjct: 190 ----------------IP---FMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDEN 228

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D   PN + SL   +I  +  G  HT  ++ +G V+ FG   +GQLG      E  PR  
Sbjct: 229 DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR-- 286

Query: 399 DAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
               L       ++CG +HT A +   G+++ +G    GQLG G   +R  P  V
Sbjct: 287 KVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLG-TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VFCWG NKYGQLGLG    +    Q+  ++ G     VA G  H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      +  ++  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 439 GL-----GDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALS 153



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 124/304 (40%), Gaps = 48/304 (15%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D     V S +   +P      ++  IV+ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++  EV+ WG  +       +G L  GT    D  ++ S  L + +     
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK-------YGQLGLGT----DCKKQTSPQLLKSLLGIPF 192

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           +  ++GG  S          G  R +              DEN    P L+      +I 
Sbjct: 193 MQVAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRSQKIV 245

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +                
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 288

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                     F + G+ V  IACG +H SA +  +G + +FG G  GQ G GST +  SP
Sbjct: 289 ----------FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 344 NCVS 347
             V 
Sbjct: 339 FTVK 342


>gi|63025188|ref|NP_071362.1| probable E3 ubiquitin-protein ligase HERC4 isoform a [Homo sapiens]
 gi|74707832|sp|Q5GLZ8.1|HERC4_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           4
 gi|37900475|gb|AAO65480.1| HECT and RCC1 containing protein 4 isoform 1 [Homo sapiens]
 gi|119574649|gb|EAW54264.1| hect domain and RLD 4, isoform CRA_d [Homo sapiens]
          Length = 1057

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 113/249 (45%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +           
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQ------- 138

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDEL 341
                              +  +ACG  HS  ++ A  +  +G   YGQ G G+    + 
Sbjct: 139 -------------------IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQT 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  + SLLGI    VAAG  H+  ++  G ++ +G N+FGQLG   +    +P LL   
Sbjct: 180 SPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK-- 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL +     + CG  HTA +  +G VF +G   YGQLG         P +V  + G +  
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297

Query: 461 NVACGWWHT 469
            +ACG  HT
Sbjct: 298 EIACGRQHT 306



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/235 (31%), Positives = 109/235 (46%), Gaps = 33/235 (14%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++I  VA G  H+LALS   +V+ WG    GQLGLG+  +  +SP     ++S  G    
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQ---LLKSLLG---- 189

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTD 338
                           +P      +A GG HS V+T +GA+  FGWG   +GQ G    +
Sbjct: 190 ----------------IP---FMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDEN 228

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D   PN + SL   +I  +  G  HT  ++ +G V+ FG   +GQLG      E  PR  
Sbjct: 229 DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR-- 286

Query: 399 DAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
               L       ++CG +HT A +   G+++ +G    GQLG G   +R  P  V
Sbjct: 287 KVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLG-TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VFCWG NKYGQLGLG    +    Q+  ++ G     VA G  H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      +  ++  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 439 GL-----GDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALS 153



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 124/304 (40%), Gaps = 48/304 (15%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D     V S +   +P      ++  IV+ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++  EV+ WG  +       +G L  GT    D  ++ S  L + +     
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK-------YGQLGLGT----DCKKQTSPQLLKSLLGIPF 192

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           +  ++GG  S          G  R +              DEN    P L+      +I 
Sbjct: 193 MQVAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRSQKIV 245

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +                
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 288

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                     F + G+ V  IACG +H SA +  +G + +FG G  GQ G GST +  SP
Sbjct: 289 ----------FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 344 NCVS 347
             V 
Sbjct: 339 FTVK 342


>gi|149689922|ref|XP_001503631.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Equus caballus]
          Length = 1049

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 110/249 (44%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +           
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDI-------- 137

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDEL 341
                              +  +ACG  HS  ++ A  +  +G   YGQ G G     + 
Sbjct: 138 ------------------QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQA 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  + SLLGI    VAAG  H+  ++  G ++ +G N+FGQLG   +     P LL   
Sbjct: 180 SPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYFPNLLK-- 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL       + CG  HTA +  +G VF +G   YGQLG         P +V  + G +  
Sbjct: 238 SLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297

Query: 461 NVACGWWHT 469
            +ACG  HT
Sbjct: 298 QIACGRQHT 306



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 90/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  +   G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  VRDVGCGLRHTVFVLHDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLG-TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VFCWG NKYGQLGLG    +    Q+  ++ G     VA G  H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      +  ++  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQLG   +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQLG--HEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 439 GL-----GDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALS 153



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 79/305 (25%), Positives = 129/305 (42%), Gaps = 50/305 (16%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D     + S +   +P      ++  IV+ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSS-FLTEQVSPRS 163
            G+ H +A+++  EV+ WG  +       +G L  G G+D   +++Q+S  L + +    
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK-------YGQL--GLGID---YKKQASPQLIKSLLGIP 191

Query: 164 QVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRI 223
            +  ++GG  S          G  R +              DEN   FP L+      +I
Sbjct: 192 FMQVAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYFPNLLKSLRTQKI 244

Query: 224 ATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAAL 283
             +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +               
Sbjct: 245 VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV--------------- 288

Query: 284 SRGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                      F + G+ V  IACG +H SA +  +G + +FG G  GQ G GST +  S
Sbjct: 289 -----------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKS 337

Query: 343 PNCVS 347
           P  V 
Sbjct: 338 PFTVK 342


>gi|149689920|ref|XP_001503636.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Equus caballus]
          Length = 1057

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 110/249 (44%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +           
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDI-------- 137

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDEL 341
                              +  +ACG  HS  ++ A  +  +G   YGQ G G     + 
Sbjct: 138 ------------------QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQA 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  + SLLGI    VAAG  H+  ++  G ++ +G N+FGQLG   +     P LL   
Sbjct: 180 SPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYFPNLL--K 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL       + CG  HTA +  +G VF +G   YGQLG         P +V  + G +  
Sbjct: 238 SLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297

Query: 461 NVACGWWHT 469
            +ACG  HT
Sbjct: 298 QIACGRQHT 306



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 90/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  +   G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  VRDVGCGLRHTVFVLHDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLG-TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VFCWG NKYGQLGLG    +    Q+  ++ G     VA G  H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      +  ++  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQLG   +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQLG--HEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 439 GL-----GDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALS 153



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 79/305 (25%), Positives = 129/305 (42%), Gaps = 50/305 (16%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D     + S +   +P      ++  IV+ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSS-FLTEQVSPRS 163
            G+ H +A+++  EV+ WG  +       +G L  G G+D   +++Q+S  L + +    
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK-------YGQL--GLGID---YKKQASPQLIKSLLGIP 191

Query: 164 QVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRI 223
            +  ++GG  S          G  R +              DEN   FP L+      +I
Sbjct: 192 FMQVAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYFPNLLKSLRTQKI 244

Query: 224 ATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAAL 283
             +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +               
Sbjct: 245 VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV--------------- 288

Query: 284 SRGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                      F + G+ V  IACG +H SA +  +G + +FG G  GQ G GST +  S
Sbjct: 289 -----------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKS 337

Query: 343 PNCVS 347
           P  V 
Sbjct: 338 PFTVK 342


>gi|426364912|ref|XP_004049535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Gorilla gorilla gorilla]
          Length = 1057

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 113/249 (45%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +           
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQ------- 138

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDEL 341
                              +  +ACG  HS  ++ A  +  +G   YGQ G G+    + 
Sbjct: 139 -------------------IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQT 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  + SLLGI    VAAG  H+  ++  G ++ +G N+FGQLG   +    +P LL   
Sbjct: 180 SPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLL--K 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL +     + CG  HTA +  +G VF +G   YGQLG         P +V  + G +  
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297

Query: 461 NVACGWWHT 469
            +ACG  HT
Sbjct: 298 EIACGRQHT 306



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 75/235 (31%), Positives = 109/235 (46%), Gaps = 33/235 (14%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++I  VA G  H+LALS   +V+ WG    GQLGLG+  +  +SP     ++S  G    
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQ---LLKSLLG---- 189

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTD 338
                           +P      +A GG HS V+T +GA+  FGWG   +GQ G    +
Sbjct: 190 ----------------IP---FMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDEN 228

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D   PN + SL   +I  +  G  HT  ++ +G V+ FG   +GQLG      E  PR  
Sbjct: 229 DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR-- 286

Query: 399 DAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
               L       ++CG +HT A +   G+++ +G    GQLG G   +R  P  V
Sbjct: 287 KVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           ++ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  IRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLG-TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VFCWG NKYGQLGLG    +    Q+  ++ G     VA G  H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      +  +I  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 439 GL-----GDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALS 153



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 124/304 (40%), Gaps = 48/304 (15%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D     V S +   +P      ++  IV+ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++  EV+ WG  +       +G L  GT    D  ++ S  L + +     
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK-------YGQLGLGT----DCKKQTSPQLLKSLLGIPF 192

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           +  ++GG  S          G  R +              DEN    P L+      +I 
Sbjct: 193 MQVAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRSQKIV 245

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +                
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 288

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                     F + G+ V  IACG +H SA +  +G + +FG G  GQ G GST +  SP
Sbjct: 289 ----------FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 344 NCVS 347
             V 
Sbjct: 339 FTVK 342


>gi|321470134|gb|EFX81111.1| hypothetical protein DAPPUDRAFT_50378 [Daphnia pulex]
          Length = 4502

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 87/263 (33%), Positives = 137/263 (52%), Gaps = 48/263 (18%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPC-----IESSY 275
            V+   V +GG+H LALS  G+V+ WG G +G+LG G+++         PC     IES  
Sbjct: 3701 VKKVAVNSGGKHCLALSSEGEVYSWGEGEDGKLGHGNKL---------PCDRPRIIESLR 3751

Query: 276  GKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG 335
            GKD                       V  +ACGG HSA IT  G L T+G G YG+ G G
Sbjct: 3752 GKD-----------------------VVDVACGGAHSAAITALGELYTWGKGRYGRLGHG 3788

Query: 336  STDDELSPNCVSSLLGIQIEGVA--AGLWHTICISSD--GDVYAFGGNQFGQLGTGGDQA 391
             +DD+L P  V +LLG ++  VA  +G   T  I+ +  G V+++G   +G+LG GG   
Sbjct: 3789 DSDDQLKPKLVEALLGYRVMDVACGSGDAQTCAITDEEGGTVWSWGDGDYGKLGRGGSDG 3848

Query: 392  ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNI--P 449
              +P  ++  SL  +    V CG++ +  ++++G V+ WG   Y +LG G  +D ++  P
Sbjct: 3849 CKIPTKIE--SLSGLGIIKVECGSQFSVALSNNGSVYTWGKGDYHRLGHG--VDEHVRRP 3904

Query: 450  SQV-TIEGCVPRNVACGWWHTLL 471
             +V T++G    +++ G  H ++
Sbjct: 3905 KKVMTLQGKKVISISTGALHCVV 3927



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 135/308 (43%), Gaps = 80/308 (25%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            VR   V +GGRH LAL+  G+V+ WG G +G+LG G     V+S     CIE        
Sbjct: 2785 VRKVAVHSGGRHALALTADGRVFSWGEGDDGKLGHGD----VTSLDTPRCIE-------- 2832

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
             AL+         GFRV     + +A G  HSA +T +G L T+G G YG+ G G    +
Sbjct: 2833 -ALN---------GFRV-----RDVAAGSNHSAAVTSSGELYTWGLGEYGRLGHGDNLTQ 2877

Query: 341  LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L+P  V SL+G ++  V+ G     T+ +   G VY++G   FG+LG GG +  + P L+
Sbjct: 2878 LTPKRVESLVGQRVVQVSCGSRDAQTLALVEGGLVYSWGDGDFGKLGRGGSEGCSSPCLV 2937

Query: 399  DA----------------------------------------------PSL-ENVHSKSV 411
            D                                               P+L E +  K V
Sbjct: 2938 DKLSGLGVCHVECGAQFSVALTCNGHVYTWGKGDYFRLGHGSDQHVRWPTLVEGLRGKKV 2997

Query: 412  ---SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWW 467
               S GA H   + D G+VF WG N +GQ G G +     P+ V  I+G     VACG  
Sbjct: 2998 IGVSVGALHCLAVTDAGQVFAWGDNDHGQQGNGSITVNRRPTLVQGIDGIKITRVACGSS 3057

Query: 468  HTLLLAVP 475
            H++    P
Sbjct: 3058 HSVAWTAP 3065



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 111/229 (48%), Gaps = 33/229 (14%)

Query: 215  VTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESS 274
            V+L P     +VA G +    ++  G+ +  G G  G+LGLG   R V+SPH I      
Sbjct: 2729 VSLQP----ISVAGGSKSLFLVTQSGKAYACGEGSNGRLGLGHS-RNVNSPHQI------ 2777

Query: 275  YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
                   ALS+  V                +  GGRH+  +T  G + ++G G  G+ G 
Sbjct: 2778 ------TALSQHVVRK------------VAVHSGGRHALALTADGRVFSWGEGDDGKLGH 2819

Query: 335  GSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL 394
            G      +P C+ +L G ++  VAAG  H+  ++S G++Y +G  ++G+LG G +  +  
Sbjct: 2820 GDVTSLDTPRCIEALNGFRVRDVAAGSNHSAAVTSSGELYTWGLGEYGRLGHGDNLTQLT 2879

Query: 395  PRLLDAPSLENVHSKSVSCGAR--HTAVIADDGKVFCWGWNKYGQLGLG 441
            P+ ++  SL       VSCG+R   T  + + G V+ WG   +G+LG G
Sbjct: 2880 PKRVE--SLVGQRVVQVSCGSRDAQTLALVEGGLVYSWGDGDFGKLGRG 2926



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 94/325 (28%), Positives = 134/325 (41%), Gaps = 56/325 (17%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V   +G  HC+A++  GEVY+WG  E        G L  G  L  D        + E + 
Sbjct: 3704 VAVNSGGKHCLALSSEGEVYSWGEGE-------DGKLGHGNKLPCD-----RPRIIESLR 3751

Query: 161  PRSQVSRSSGGT-SSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
             +  V  + GG  S+     G      K R   L          GD +    P LV    
Sbjct: 3752 GKDVVDVACGGAHSAAITALGELYTWGKGRYGRLGH--------GDSDDQLKPKLVEALL 3803

Query: 220  GVRIATVA--AGGRHTLALSDI--GQVWGWGYGGEGQLGLGSRIRMVSSPHPIPC-IESS 274
            G R+  VA  +G   T A++D   G VW WG G  G+LG G      S    IP  IES 
Sbjct: 3804 GYRVMDVACGSGDAQTCAITDEEGGTVWSWGDGDYGKLGRGG-----SDGCKIPTKIES- 3857

Query: 275  YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
                                  + G  +  + CG + S  +++ G++ T+G G Y + G 
Sbjct: 3858 ----------------------LSGLGIIKVECGSQFSVALSNNGSVYTWGKGDYHRLGH 3895

Query: 335  GSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL 394
            G  +    P  V +L G ++  ++ G  H +  +  G+VY +G N  GQLG G       
Sbjct: 3896 GVDEHVRRPKKVMTLQGKKVISISTGALHCVVCTDQGEVYTWGDNDEGQLGDGTTTGIQK 3955

Query: 395  PRLLDAPSLENVHSKSVSCGARHTA 419
            PRL+ A  L+N     VSCG+ HT 
Sbjct: 3956 PRLVAA--LQNKKINRVSCGSAHTV 3978



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 98/402 (24%), Positives = 165/402 (41%), Gaps = 75/402 (18%)

Query: 59   AISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGE 118
            ++S ++++  WG  +D  Q     G   ++P+          +  A G      VT+ G+
Sbjct: 2693 SVSGAKRVYVWG-LNDKEQLGGPKGSKIKVPQAVDWTVSLQPISVAGGSKSLFLVTQSGK 2751

Query: 119  VYTWGWKECVPSGRVFGDLSTGTGLDKDVFE-RQSSFLTEQVSPRSQVSRSSGGTSS--- 174
             Y  G      +GR+      G G  ++V    Q + L++ V    +V+  SGG  +   
Sbjct: 2752 AYACGEGS---NGRL------GLGHSRNVNSPHQITALSQHVV--RKVAVHSGGRHALAL 2800

Query: 175  GTDGR----GSGEEGSKRRRISLAKQTAESSSSGD-ENLSAFPCLVTLNPGVRIATVAAG 229
              DGR    G G++G                  GD  +L    C+  LN G R+  VAAG
Sbjct: 2801 TADGRVFSWGEGDDGKL--------------GHGDVTSLDTPRCIEALN-GFRVRDVAAG 2845

Query: 230  GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVN 289
              H+ A++  G+++ WG G  G+LG G  +  ++       +ES  G+ R   +S GS +
Sbjct: 2846 SNHSAAVTSSGELYTWGLGEYGRLGHGDNLTQLTPKR----VESLVGQ-RVVQVSCGSRD 2900

Query: 290  SEGPGF--------------------------------RVPGNYVKGIACGGRHSAVITD 317
            ++                                    ++ G  V  + CG + S  +T 
Sbjct: 2901 AQTLALVEGGLVYSWGDGDFGKLGRGGSEGCSSPCLVDKLSGLGVCHVECGAQFSVALTC 2960

Query: 318  AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
             G + T+G G Y + G GS      P  V  L G ++ GV+ G  H + ++  G V+A+G
Sbjct: 2961 NGHVYTWGKGDYFRLGHGSDQHVRWPTLVEGLRGKKVIGVSVGALHCLAVTDAGQVFAWG 3020

Query: 378  GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
             N  GQ G G       P L+    ++ +    V+CG+ H+ 
Sbjct: 3021 DNDHGQQGNGSITVNRRPTLVQG--IDGIKITRVACGSSHSV 3060



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 36/231 (15%)

Query: 240  GQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRV 297
            GQ++GWG+   GQLG   G++++       +P +  +    R   L              
Sbjct: 3614 GQIYGWGHNHRGQLGGVEGAKVK-------VPTVCEALSALRPIQL-------------- 3652

Query: 298  PGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGV 357
                    A G +    IT  G +   G+G  G+ G G  +    P+ + SL  + ++ V
Sbjct: 3653 --------AGGEQTLFAITSDGRVYATGYGAGGRLGIGGAESVTVPSLLESLQHVFVKKV 3704

Query: 358  A--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGA 415
            A  +G  H + +SS+G+VY++G  + G+LG G       PR+++  SL       V+CG 
Sbjct: 3705 AVNSGGKHCLALSSEGEVYSWGEGEDGKLGHGNKLPCDRPRIIE--SLRGKDVVDVACGG 3762

Query: 416  RHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
             H+A I   G+++ WG  +YG+LG GD  D+  P  V  + G    +VACG
Sbjct: 3763 AHSAAITALGELYTWGKGRYGRLGHGDSDDQLKPKLVEALLGYRVMDVACG 3813



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 66/155 (42%), Gaps = 3/155 (1%)

Query: 318  AGALLTFGWGLYG--QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYA 375
            +GA   + WGL    Q G         P  V   + +Q   VA G      ++  G  YA
Sbjct: 2695 SGAKRVYVWGLNDKEQLGGPKGSKIKVPQAVDWTVSLQPISVAGGSKSLFLVTQSGKAYA 2754

Query: 376  FGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKY 435
             G    G+LG G  +    P  + A S   V   +V  G RH   +  DG+VF WG    
Sbjct: 2755 CGEGSNGRLGLGHSRNVNSPHQITALSQHVVRKVAVHSGGRHALALTADGRVFSWGEGDD 2814

Query: 436  GQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            G+LG GDV   + P  +  + G   R+VA G  H+
Sbjct: 2815 GKLGHGDVTSLDTPRCIEALNGFRVRDVAAGSNHS 2849



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 76/149 (51%), Gaps = 3/149 (2%)

Query: 324  FGWGL--YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
            +GWG    GQ G         P    +L  ++   +A G      I+SDG VYA G    
Sbjct: 3617 YGWGHNHRGQLGGVEGAKVKVPTVCEALSALRPIQLAGGEQTLFAITSDGRVYATGYGAG 3676

Query: 382  GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
            G+LG GG ++ T+P LL++     V   +V+ G +H   ++ +G+V+ WG  + G+LG G
Sbjct: 3677 GRLGIGGAESVTVPSLLESLQHVFVKKVAVNSGGKHCLALSSEGEVYSWGEGEDGKLGHG 3736

Query: 442  DVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            + +  + P  + ++ G    +VACG  H+
Sbjct: 3737 NKLPCDRPRIIESLRGKDVVDVACGGAHS 3765



 Score = 40.4 bits (93), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 5/73 (6%)

Query: 53   GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
            G  F++A+S++  + TWG  D   LG       +H   P+         ++  + G  HC
Sbjct: 3869 GSQFSVALSNNGSVYTWGKGDYHRLGHGV---DEHVRRPKKVMTLQGKKVISISTGALHC 3925

Query: 111  VAVTEGGEVYTWG 123
            V  T+ GEVYTWG
Sbjct: 3926 VVCTDQGEVYTWG 3938


>gi|301755908|ref|XP_002913790.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           3 [Ailuropoda melanoleuca]
          Length = 1054

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 111/249 (44%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +           
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQ------- 138

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDEL 341
                              +  +ACG  HS  ++ A  +  +G   YGQ G G     + 
Sbjct: 139 -------------------IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQA 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  + SLLGI    VAAG  H+  ++  G ++ +G N+FGQLG   +    +P LL   
Sbjct: 180 SPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK-- 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL       + CG  HTA +  +G VF +G   YGQLG         P +V  + G +  
Sbjct: 238 SLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297

Query: 461 NVACGWWHT 469
            +ACG  HT
Sbjct: 298 QIACGRQHT 306



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 76/235 (32%), Positives = 108/235 (45%), Gaps = 33/235 (14%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++I  VA G  H+LALS   +V+ WG    GQLGLG   +  +SP     I+S  G    
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQ---LIKSLLG---- 189

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTD 338
                           +P      +A GG HS V+T +GA+  FGWG   +GQ G    +
Sbjct: 190 ----------------IP---FMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDEN 228

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D   PN + SL   +I  +  G  HT  ++ +G V+ FG   +GQLG      E  PR  
Sbjct: 229 DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR-- 286

Query: 399 DAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
               L       ++CG +HT A +   G+++ +G    GQLG G   +R  P  V
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLGT-GGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VFCWG NKYGQLGLG    +    Q+  ++ G     VA G  H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      +  ++  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 439 GL-----GDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALS 153



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 77/304 (25%), Positives = 124/304 (40%), Gaps = 48/304 (15%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D     + S +   +P      ++  IV+ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++  EV+ WG  +       +G L    GL  D  ++ S  L + +     
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK-------YGQL----GLGIDCKKQASPQLIKSLLGIPF 192

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           +  ++GG  S          G  R +              DEN    P L+      +I 
Sbjct: 193 MQVAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRTQKIV 245

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +                
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 288

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                     F + G+ V  IACG +H SA +  +G + +FG G  GQ G GST +  SP
Sbjct: 289 ----------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 344 NCVS 347
             V 
Sbjct: 339 FTVK 342


>gi|426232148|ref|XP_004010096.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Ovis aries]
          Length = 992

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 88/264 (33%), Positives = 124/264 (46%), Gaps = 38/264 (14%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P L TL+    +A V+ G  H+LA+   G+V+ WG   EGQLG+G        P  I  +
Sbjct: 42  PALETLH----VALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGELKETTFIPKKIKTL 97

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
                                         +  +ACG  HS  +++ G + ++G   +GQ
Sbjct: 98  ADIK--------------------------IIQVACGHYHSLALSEDGQVFSWGKNSHGQ 131

Query: 332 CGQGST-DDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            G G     + SP  V SL GI +  VAAG  H+  +S  G  + +G N  GQL   G+ 
Sbjct: 132 LGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQLALSGNN 191

Query: 391 A---ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
           A      P L+ A  L+ +    +SCG  HTAV+  DGKVF +G N YGQLG     ++ 
Sbjct: 192 APVQRYKPVLVGA--LKTLSVVFISCGYEHTAVLTQDGKVFTFGDNSYGQLGHDSTAEKR 249

Query: 448 IPSQVT-IEGCVPRNVACGWWHTL 470
            P  V  IEG V + + CG +HTL
Sbjct: 250 GPQLVERIEGLVSQ-IDCGSYHTL 272



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 99/217 (45%), Gaps = 37/217 (17%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++I  VA G  H+LALS+ GQV+ WG    GQLGLG      +SP  +  +E        
Sbjct: 100 IKIIQVACGHYHSLALSEDGQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLE-------- 151

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGW-----GLYGQCGQG 335
                             G  +  +A GG HS  ++ +G   +FGW     G     G  
Sbjct: 152 ------------------GIPLAQVAAGGAHSFALSLSGT--SFGWGSNNAGQLALSGNN 191

Query: 336 STDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLP 395
           +      P  V +L  + +  ++ G  HT  ++ DG V+ FG N +GQLG      +  P
Sbjct: 192 APVQRYKPVLVGALKTLSVVFISCGYEHTAVLTQDGKVFTFGDNSYGQLGHDSTAEKRGP 251

Query: 396 RLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           +L++   +E + S+ + CG+ HT A +   G+V  +G
Sbjct: 252 QLVE--RIEGLVSQ-IDCGSYHTLAYVYTTGQVVSFG 285



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 88/174 (50%), Gaps = 13/174 (7%)

Query: 308 GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI 367
           G  HS ++   G + + G    GQ G+  T     P  + +L  + +  V+ G  H++ +
Sbjct: 3   GEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLHVALVSCGKEHSLAV 62

Query: 368 SSDGDVYAFGGNQFGQLGTGGDQAET-LPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
              G V+A+G    GQLG G  +  T +P+ +   +L ++    V+CG  H+  +++DG+
Sbjct: 63  CHKGRVFAWGAASEGQLGIGELKETTFIPKKIK--TLADIKIIQVACGHYHSLALSEDGQ 120

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQV------TIEGCVPRNVACGWWHTLLLAV 474
           VF WG N +GQLGLG    +  PSQ       ++EG     VA G  H+  L++
Sbjct: 121 VFSWGKNSHGQLGLG----KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSL 170



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 87/345 (25%), Positives = 135/345 (39%), Gaps = 67/345 (19%)

Query: 86  GEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRV-FGDLSTGTGLD 144
           GE PE  P      +   + G  H +AV   G V+ WG       G++  G+L   T + 
Sbjct: 35  GEQPERIPALETLHVALVSCGKEHSLAVCHKGRVFAWG---AASEGQLGIGELKETTFIP 91

Query: 145 KDVFERQSSFLTEQVSPRSQVSRSSGGTSS---GTDGRGSGEEGSKRRRISLAKQTAESS 201
           K +         + ++    +  + G   S     DG+      +   ++ L K+    +
Sbjct: 92  KKI---------KTLADIKIIQVACGHYHSLALSEDGQVFSWGKNSHGQLGLGKEFPSQA 142

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           S         P  V    G+ +A VAAGG H+ ALS  G  +GWG    GQL L      
Sbjct: 143 S---------PQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQLALSGNNAP 193

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
           V    P+                 G++ +    F         I+CG  H+AV+T  G +
Sbjct: 194 VQRYKPVLV---------------GALKTLSVVF---------ISCGYEHTAVLTQDGKV 229

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFGGNQ 380
            TFG   YGQ G  ST ++  P  V  + G+ +  +  G +HT+  + + G V +FG   
Sbjct: 230 FTFGDNSYGQLGHDSTAEKRGPQLVERIEGL-VSQIDCGSYHTLAYVYTTGQVVSFGR-- 286

Query: 381 FGQLGTGGDQAETLPR----------LLDAPSLENVHSKSVSCGA 415
               G G  ++   P           L+ A  LE+V  K +  G 
Sbjct: 287 ----GPGCTRSSPHPEALAESSDVSCLISANDLEDVQVKHIFAGT 327



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 43/117 (36%), Positives = 64/117 (54%), Gaps = 4/117 (3%)

Query: 359 AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
           +G  H++ + SDG V + G N  GQLG  G      P  +  P+LE +H   VSCG  H+
Sbjct: 2   SGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERI--PALETLHVALVSCGKEHS 59

Query: 419 AVIADDGKVFCWGWNKYGQLGLGDVIDRN-IPSQV-TIEGCVPRNVACGWWHTLLLA 473
             +   G+VF WG    GQLG+G++ +   IP ++ T+       VACG +H+L L+
Sbjct: 60  LAVCHKGRVFAWGAASEGQLGIGELKETTFIPKKIKTLADIKIIQVACGHYHSLALS 116



 Score = 41.6 bits (96), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 80/318 (25%), Positives = 124/318 (38%), Gaps = 77/318 (24%)

Query: 22  GALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVT 81
           G  P+R P L  L V L              G   ++A+    ++  WG+  + GQ  + 
Sbjct: 35  GEQPERIPALETLHVAL-----------VSCGKEHSLAVCHKGRVFAWGAASE-GQLGIG 82

Query: 82  SGKHGE-IPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTG 140
             K    IP+      +  I++ A G  H +A++E G+V++WG           G L   
Sbjct: 83  ELKETTFIPKKIKTLADIKIIQVACGHYHSLALSEDGQVFSWG-------KNSHGQL--- 132

Query: 141 TGLDKDVFERQSSFLTEQVS-----PRSQV----SRSSGGTSSGTD-GRGSGEEGSKRRR 190
            GL K+ F  Q+S   ++V      P +QV    + S   + SGT  G GS   G    +
Sbjct: 133 -GLGKE-FPSQAS--PQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAG----Q 184

Query: 191 ISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGE 250
           ++L+   A             P LV     + +  ++ G  HT  L+  G+V+ +G    
Sbjct: 185 LALSGNNAPVQRYK-------PVLVGALKTLSVVFISCGYEHTAVLTQDGKVFTFGDNSY 237

Query: 251 GQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGR 310
           GQLG                         S A  RG    E    R+ G  V  I CG  
Sbjct: 238 GQLG-----------------------HDSTAEKRGPQLVE----RIEG-LVSQIDCGSY 269

Query: 311 HS-AVITDAGALLTFGWG 327
           H+ A +   G +++FG G
Sbjct: 270 HTLAYVYTTGQVVSFGRG 287


>gi|119622536|gb|EAX02131.1| RCC1 domain containing 1, isoform CRA_b [Homo sapiens]
          Length = 390

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 116/249 (46%), Gaps = 45/249 (18%)

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFR--VPGNYVKGIACGGRHSAVITDAGALLTFGW 326
           P  E+  G+      +R  V+   P +R   P    + +  G  H+ ++  AG + ++G 
Sbjct: 139 PAGEAQAGRLPLLPCARAYVSPRAPFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGG 198

Query: 327 GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLG- 385
           G +GQ G G+ + EL P  + +L G+ +  VAAG WH++C+S  GD+Y +G N+ GQL  
Sbjct: 199 GRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLAL 258

Query: 386 ----------------------------TGGDQ---------AETLPRLLDAPSLENVHS 408
                                       TGG +          +  P LLD P   +  +
Sbjct: 259 PTRNLAEDGETVAREATELNEDGSQVKRTGGAEDGAPAPFIAVQPFPALLDLPMGSD--A 316

Query: 409 KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI---EGCVPRNVACG 465
              SCG+RHTAV+   G+++ WGW KYGQLG  D    + P +V     +    + V CG
Sbjct: 317 VKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYFVDKQLQVKAVTCG 376

Query: 466 WWHTLLLAV 474
            W+T + AV
Sbjct: 377 PWNTYVYAV 385



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 78/173 (45%), Gaps = 15/173 (8%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P L+    G+ +A VAAGG H++ +S+ G ++ WG+   GQL L +R  +      +   
Sbjct: 215 PRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTR-NLAEDGETVARE 273

Query: 272 ESSYGKDRSAALSRGSVNSEGPG-----------FRVP-GNYVKGIACGGRHSAVITDAG 319
            +   +D S     G      P              +P G+     +CG RH+AV+T  G
Sbjct: 274 ATELNEDGSQVKRTGGAEDGAPAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTG 333

Query: 320 ALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG--IQIEGVAAGLWHTICISSD 370
            L T+GWG YGQ G   T     P  V   +   +Q++ V  G W+T   + +
Sbjct: 334 ELYTWGWGKYGQLGHEDTTSLDRPRRVEYFVDKQLQVKAVTCGPWNTYVYAVE 386



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 67/155 (43%), Gaps = 40/155 (25%)

Query: 103 AAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGT---GLDKDVFERQSSFLTEQV 159
           AA GW H V V+E G++Y WGW E        G L+  T     D +   R+++ L E  
Sbjct: 230 AAGGW-HSVCVSETGDIYIWGWNES-------GQLALPTRNLAEDGETVAREATELNED- 280

Query: 160 SPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
              SQV R+ G            E+G+    I++                 FP L+ L  
Sbjct: 281 --GSQVKRTGGA-----------EDGAPAPFIAV---------------QPFPALLDLPM 312

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG 254
           G      + G RHT  ++  G+++ WG+G  GQLG
Sbjct: 313 GSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLG 347



 Score = 38.9 bits (89), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 11/75 (14%)

Query: 90  EPFP----LPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDK 145
           +PFP    LP  +  VKA+ G  H   VT  GE+YTWGW +       +G L        
Sbjct: 302 QPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGK-------YGQLGHEDTTSL 354

Query: 146 DVFERQSSFLTEQVS 160
           D   R   F+ +Q+ 
Sbjct: 355 DRPRRVEYFVDKQLQ 369


>gi|110825982|ref|NP_057407.2| E3 ISG15--protein ligase HERC5 [Homo sapiens]
 gi|296434523|sp|Q9UII4.2|HERC5_HUMAN RecName: Full=E3 ISG15--protein ligase HERC5; AltName:
           Full=Cyclin-E-binding protein 1; AltName: Full=HECT
           domain and RCC1-like domain-containing protein 5
 gi|119626425|gb|EAX06020.1| hect domain and RLD 5 [Homo sapiens]
          Length = 1024

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 129/269 (47%), Gaps = 33/269 (12%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI------PCIESSY 275
           +I  +  G  H+LALS  G+++ WG    GQLG+G +    ++P  +      P  + S 
Sbjct: 139 KIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISA 198

Query: 276 GKDRSAALSR-GSVNS-----------------EGPGFR--VPGNYVKGIACGGRHSAVI 315
           G+  S ALS  G++ S                 + P     +    V+ +ACGG HSA++
Sbjct: 199 GEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALL 258

Query: 316 TDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD-GDVY 374
           T  G L TFG G +GQ G  ST +EL P  V+ L+G ++  +A G WHT+   SD G V+
Sbjct: 259 TQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVF 318

Query: 375 AFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNK 434
           +FG  + GQLG GG + + +P  +   S E +  +S +       +   +  +  W   +
Sbjct: 319 SFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWIKKE 378

Query: 435 YGQLGLGDVIDRNIPSQVTIEGCVPRNVA 463
              + L     R IP+    EG V R +A
Sbjct: 379 NSYVNL----KRTIPT--LNEGTVKRWIA 401



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 58/168 (34%), Positives = 92/168 (54%), Gaps = 4/168 (2%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDELSPNCVSSLLGIQIEGVAAGLWH 363
           I CG  HS  ++  G L  +G  L+GQ G G       +P  V  L G+ +  ++AG  H
Sbjct: 143 ITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAH 202

Query: 364 TICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
           ++ +S  G++Y++G N+ GQLG G  +++  P L++   L+N   + V+CG  H+A++  
Sbjct: 203 SMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEG--LDNQKVEFVACGGSHSALLTQ 260

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
           DG +F +G  K+GQLG     +   P  V  + G     +ACG WHTL
Sbjct: 261 DGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTL 308



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 99/229 (43%), Gaps = 57/229 (24%)

Query: 57  AMAISDSRKLITWGSTDDLGQSYVTSGKHGE--IPEPFPLPTEASIV---------KAAA 105
           ++A+S   +L  WG              HG+  +   FP  T   IV         + +A
Sbjct: 150 SLALSKGGELFAWGQ-----------NLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISA 198

Query: 106 GWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQV 165
           G AH +A++  G +Y+WG  EC       G L  G    KD        L E +  +   
Sbjct: 199 GEAHSMALSMSGNIYSWGKNEC-------GQLGLGHTESKD-----DPSLIEGLDNQKVE 246

Query: 166 SRSSGGTSSG---TDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLN 218
             + GG+ S     DG     G+G+ G          Q   +S+  +      PCLV   
Sbjct: 247 FVACGGSHSALLTQDGLLFTFGAGKHG----------QLGHNSTQNELR----PCLVAEL 292

Query: 219 PGVRIATVAAGGRHTLA-LSDIGQVWGWGYGGEGQLGL-GSRIRMVSSP 265
            G R+  +A G  HTLA +SD+G+V+ +G G +GQLG  G+R +++  P
Sbjct: 293 VGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLP 341



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 99/250 (39%), Gaps = 50/250 (20%)

Query: 97  EASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLT 156
           E  I++   G  H +A+++GGE++ WG         + G L  G           +  + 
Sbjct: 137 EKKIIQITCGDYHSLALSKGGELFAWG-------QNLHGQLGVGRKFPSTT----TPQIV 185

Query: 157 EQVS--PRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCL 214
           E ++  P +Q+S +    S      G+     K     L     ES           P L
Sbjct: 186 EHLAGVPLAQIS-AGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDD--------PSL 236

Query: 215 VTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESS 274
           +      ++  VA GG H+  L+  G ++ +G G  GQLG  S     +     PC+   
Sbjct: 237 IEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNS-----TQNELRPCLV-- 289

Query: 275 YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHS-AVITDAGALLTFGWGLYGQCG 333
                          +E  G+RV       IACG  H+ A ++D G + +FG G  GQ G
Sbjct: 290 ---------------AELVGYRVT-----QIACGRWHTLAYVSDLGKVFSFGSGKDGQLG 329

Query: 334 QGSTDDELSP 343
            G T D+L P
Sbjct: 330 NGGTRDQLMP 339



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 72/175 (41%), Gaps = 45/175 (25%)

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSD------------------------------- 370
           +P C+     ++I  V  G  H + +SSD                               
Sbjct: 87  TPKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEYDNYSMKHLRFESILQEKKIIQITCG 146

Query: 371 ----------GDVYAFGGNQFGQLGTGGD-QAETLPRLLDAPSLENVHSKSVSCGARHTA 419
                     G+++A+G N  GQLG G    + T P++++   L  V    +S G  H+ 
Sbjct: 147 DYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVE--HLAGVPLAQISAGEAHSM 204

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLA 473
            ++  G ++ WG N+ GQLGLG    ++ PS +  ++      VACG  H+ LL 
Sbjct: 205 ALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLT 259


>gi|301755906|ref|XP_002913789.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Ailuropoda melanoleuca]
          Length = 1049

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 111/249 (44%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +           
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQ------- 138

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDEL 341
                              +  +ACG  HS  ++ A  +  +G   YGQ G G     + 
Sbjct: 139 -------------------IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQA 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  + SLLGI    VAAG  H+  ++  G ++ +G N+FGQLG   +    +P LL   
Sbjct: 180 SPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK-- 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL       + CG  HTA +  +G VF +G   YGQLG         P +V  + G +  
Sbjct: 238 SLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297

Query: 461 NVACGWWHT 469
            +ACG  HT
Sbjct: 298 QIACGRQHT 306



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 76/235 (32%), Positives = 108/235 (45%), Gaps = 33/235 (14%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++I  VA G  H+LALS   +V+ WG    GQLGLG   +  +SP     I+S  G    
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQ---LIKSLLG---- 189

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTD 338
                           +P      +A GG HS V+T +GA+  FGWG   +GQ G    +
Sbjct: 190 ----------------IP---FMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDEN 228

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D   PN + SL   +I  +  G  HT  ++ +G V+ FG   +GQLG      E  PR  
Sbjct: 229 DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR-- 286

Query: 399 DAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
               L       ++CG +HT A +   G+++ +G    GQLG G   +R  P  V
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLGT-GGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VFCWG NKYGQLGLG    +    Q+  ++ G     VA G  H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      +  ++  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 439 GL-----GDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALS 153



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 77/304 (25%), Positives = 124/304 (40%), Gaps = 48/304 (15%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D     + S +   +P      ++  IV+ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++  EV+ WG  +       +G L    GL  D  ++ S  L + +     
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK-------YGQL----GLGIDCKKQASPQLIKSLLGIPF 192

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           +  ++GG  S          G  R +              DEN    P L+      +I 
Sbjct: 193 MQVAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRTQKIV 245

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +                
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 288

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                     F + G+ V  IACG +H SA +  +G + +FG G  GQ G GST +  SP
Sbjct: 289 ----------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 344 NCVS 347
             V 
Sbjct: 339 FTVK 342


>gi|187954501|gb|AAI40717.1| Hect domain and RLD 5 [Homo sapiens]
          Length = 1024

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 129/269 (47%), Gaps = 33/269 (12%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI------PCIESSY 275
           +I  +  G  H+LALS  G+++ WG    GQLG+G +    ++P  +      P  + S 
Sbjct: 139 KIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISA 198

Query: 276 GKDRSAALSR-GSVNS-----------------EGPGFR--VPGNYVKGIACGGRHSAVI 315
           G+  S ALS  G++ S                 + P     +    V+ +ACGG HSA++
Sbjct: 199 GEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALL 258

Query: 316 TDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD-GDVY 374
           T  G L TFG G +GQ G  ST +EL P  V+ L+G ++  +A G WHT+   SD G V+
Sbjct: 259 TQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVF 318

Query: 375 AFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNK 434
           +FG  + GQLG GG + + +P  +   S E +  +S +       +   +  +  W   +
Sbjct: 319 SFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWIKKE 378

Query: 435 YGQLGLGDVIDRNIPSQVTIEGCVPRNVA 463
              + L     R IP+    EG V R +A
Sbjct: 379 NSYVNL----KRTIPT--LNEGTVKRWIA 401



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 58/168 (34%), Positives = 92/168 (54%), Gaps = 4/168 (2%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDELSPNCVSSLLGIQIEGVAAGLWH 363
           I CG  HS  ++  G L  +G  L+GQ G G       +P  V  L G+ +  ++AG  H
Sbjct: 143 ITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAH 202

Query: 364 TICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
           ++ +S  G++Y++G N+ GQLG G  +++  P L++   L+N   + V+CG  H+A++  
Sbjct: 203 SMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEG--LDNQKVEFVACGGSHSALLTQ 260

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
           DG +F +G  K+GQLG     +   P  V  + G     +ACG WHTL
Sbjct: 261 DGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTL 308



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 99/229 (43%), Gaps = 57/229 (24%)

Query: 57  AMAISDSRKLITWGSTDDLGQSYVTSGKHGE--IPEPFPLPTEASIV---------KAAA 105
           ++A+S   +L  WG              HG+  +   FP  T   IV         + +A
Sbjct: 150 SLALSKGGELFAWGQ-----------NLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISA 198

Query: 106 GWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQV 165
           G AH +A++  G +Y+WG  EC       G L  G    KD        L E +  +   
Sbjct: 199 GEAHSMALSMSGNIYSWGKNEC-------GQLGLGHTESKD-----DPSLIEGLDNQKVE 246

Query: 166 SRSSGGTSSG---TDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLN 218
             + GG+ S     DG     G+G+ G          Q   +S+  +      PCLV   
Sbjct: 247 FVACGGSHSALLTQDGLLFTFGAGKHG----------QLGHNSTQNELR----PCLVAEL 292

Query: 219 PGVRIATVAAGGRHTLA-LSDIGQVWGWGYGGEGQLGL-GSRIRMVSSP 265
            G R+  +A G  HTLA +SD+G+V+ +G G +GQLG  G+R +++  P
Sbjct: 293 VGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLP 341



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 99/250 (39%), Gaps = 50/250 (20%)

Query: 97  EASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLT 156
           E  I++   G  H +A+++GGE++ WG         + G L  G           +  + 
Sbjct: 137 EKKIIQITCGDYHSLALSKGGELFAWG-------QNLHGQLGVGRKFPSTT----TPQIV 185

Query: 157 EQVS--PRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCL 214
           E ++  P +Q+S +    S      G+     K     L     ES           P L
Sbjct: 186 EHLAGVPLAQIS-AGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDD--------PSL 236

Query: 215 VTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESS 274
           +      ++  VA GG H+  L+  G ++ +G G  GQLG  S     +     PC+   
Sbjct: 237 IEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNS-----TQNELRPCLV-- 289

Query: 275 YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHS-AVITDAGALLTFGWGLYGQCG 333
                          +E  G+RV       IACG  H+ A ++D G + +FG G  GQ G
Sbjct: 290 ---------------AELVGYRVT-----QIACGRWHTLAYVSDLGKVFSFGSGKDGQLG 329

Query: 334 QGSTDDELSP 343
            G T D+L P
Sbjct: 330 NGGTRDQLMP 339



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 72/175 (41%), Gaps = 45/175 (25%)

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSD------------------------------- 370
           +P C+     ++I  V  G  H + +SSD                               
Sbjct: 87  TPKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEYDNYSMKHLRFESILQEKKIIQITCG 146

Query: 371 ----------GDVYAFGGNQFGQLGTGGD-QAETLPRLLDAPSLENVHSKSVSCGARHTA 419
                     G+++A+G N  GQLG G    + T P++++   L  V    +S G  H+ 
Sbjct: 147 DYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVE--HLAGVPLAQISAGEAHSM 204

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLA 473
            ++  G ++ WG N+ GQLGLG    ++ PS +  ++      VACG  H+ LL 
Sbjct: 205 ALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLT 259


>gi|6630609|dbj|BAA88519.1| cyclin-E binding protein 1 [Homo sapiens]
          Length = 1024

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 129/269 (47%), Gaps = 33/269 (12%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI------PCIESSY 275
           +I  +  G  H+LALS  G+++ WG    GQLG+G +    ++P  +      P  + S 
Sbjct: 139 KIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISA 198

Query: 276 GKDRSAALSR-GSVNS-----------------EGPGFR--VPGNYVKGIACGGRHSAVI 315
           G+  S ALS  G++ S                 + P     +    V+ +ACGG HSA++
Sbjct: 199 GEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALL 258

Query: 316 TDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD-GDVY 374
           T  G L TFG G +GQ G  ST +EL P  V+ L+G ++  +A G WHT+   SD G V+
Sbjct: 259 TQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVF 318

Query: 375 AFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNK 434
           +FG  + GQLG GG + + +P  +   S E +  +S +       +   +  +  W   +
Sbjct: 319 SFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWIKKE 378

Query: 435 YGQLGLGDVIDRNIPSQVTIEGCVPRNVA 463
              + L     R IP+    EG V R +A
Sbjct: 379 NSYVNL----KRTIPT--LNEGTVKRWIA 401



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 58/168 (34%), Positives = 92/168 (54%), Gaps = 4/168 (2%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDELSPNCVSSLLGIQIEGVAAGLWH 363
           I CG  HS  ++  G L  +G  L+GQ G G       +P  V  L G+ +  ++AG  H
Sbjct: 143 ITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAH 202

Query: 364 TICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
           ++ +S  G++Y++G N+ GQLG G  +++  P L++   L+N   + V+CG  H+A++  
Sbjct: 203 SMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEG--LDNQKVEFVACGGSHSALLTQ 260

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
           DG +F +G  K+GQLG     +   P  V  + G     +ACG WHTL
Sbjct: 261 DGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTL 308



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 99/229 (43%), Gaps = 57/229 (24%)

Query: 57  AMAISDSRKLITWGSTDDLGQSYVTSGKHGE--IPEPFPLPTEASIV---------KAAA 105
           ++A+S   +L  WG              HG+  +   FP  T   IV         + +A
Sbjct: 150 SLALSKGGELFAWGQ-----------NLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISA 198

Query: 106 GWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQV 165
           G AH +A++  G +Y+WG  EC       G L  G    KD        L E +  +   
Sbjct: 199 GEAHSMALSMSGNIYSWGKNEC-------GQLGLGHTESKD-----DPSLIEGLDNQKVE 246

Query: 166 SRSSGGTSSG---TDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLN 218
             + GG+ S     DG     G+G+ G          Q   +S+  +      PCLV   
Sbjct: 247 FVACGGSHSALLTQDGLLFTFGAGKHG----------QLGHNSTQNELR----PCLVAEL 292

Query: 219 PGVRIATVAAGGRHTLA-LSDIGQVWGWGYGGEGQLGL-GSRIRMVSSP 265
            G R+  +A G  HTLA +SD+G+V+ +G G +GQLG  G+R +++  P
Sbjct: 293 VGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLP 341



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 99/250 (39%), Gaps = 50/250 (20%)

Query: 97  EASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLT 156
           E  I++   G  H +A+++GGE++ WG         + G L  G           +  + 
Sbjct: 137 EKKIIQITCGDYHSLALSKGGELFAWG-------QNLHGQLGVGRKFPSTT----TPQIV 185

Query: 157 EQVS--PRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCL 214
           E ++  P +Q+S +    S      G+     K     L     ES           P L
Sbjct: 186 EHLAGVPLAQIS-AGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDD--------PSL 236

Query: 215 VTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESS 274
           +      ++  VA GG H+  L+  G ++ +G G  GQLG  S     +     PC+   
Sbjct: 237 IEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNS-----TQNELRPCLV-- 289

Query: 275 YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHS-AVITDAGALLTFGWGLYGQCG 333
                          +E  G+RV       IACG  H+ A ++D G + +FG G  GQ G
Sbjct: 290 ---------------AELVGYRVT-----QIACGRWHTLAYVSDLGKVFSFGSGKDGQLG 329

Query: 334 QGSTDDELSP 343
            G T D+L P
Sbjct: 330 NGGTRDQLMP 339



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 72/175 (41%), Gaps = 45/175 (25%)

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSD------------------------------- 370
           +P C+     ++I  V  G  H + +SSD                               
Sbjct: 87  TPKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEYDNYSMKHLRFESILQEKKIIQITCG 146

Query: 371 ----------GDVYAFGGNQFGQLGTGGD-QAETLPRLLDAPSLENVHSKSVSCGARHTA 419
                     G+++A+G N  GQLG G    + T P++++   L  V    +S G  H+ 
Sbjct: 147 DYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVE--HLAGVPLAQISAGEAHSM 204

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLA 473
            ++  G ++ WG N+ GQLGLG    ++ PS +  ++      VACG  H+ LL 
Sbjct: 205 ALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLT 259


>gi|359479203|ref|XP_002279847.2| PREDICTED: uncharacterized protein LOC100248282 isoform 1 [Vitis
           vinifera]
          Length = 1107

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 66/171 (38%), Positives = 98/171 (57%), Gaps = 4/171 (2%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ IACGGRH+A++T  G + ++G    G+ G G   D L P  + SL    IE VA G 
Sbjct: 314 VQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPKLIDSLSNTNIELVACGE 373

Query: 362 WHTICISSDGDVYAFGGN--QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
           +HT  ++  GD+Y +G     FG LG G + +  +P+ ++ P LE +H  S+SCG  HTA
Sbjct: 374 YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGP-LEGIHVSSISCGPWHTA 432

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
           V+   G++F +G   +G LG GD    + P +V +++G      ACG WHT
Sbjct: 433 VVTSSGQLFTFGDGTFGVLGHGDTKSVSKPREVESLKGHRTVISACGVWHT 483



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 83/277 (29%), Positives = 121/277 (43%), Gaps = 45/277 (16%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYG--GEGQLGLGSRIRMVSSPHPIP 269
           P L+       I  VA G  HT A++  G ++ WG G    G LG G+ +      H +P
Sbjct: 355 PKLIDSLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEV-----SHWVP 409

Query: 270 CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
                             VN  GP   + G +V  I+CG  H+AV+T +G L TFG G +
Sbjct: 410 ----------------KRVN--GP---LEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTF 448

Query: 330 GQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI------------SSDGDVYAFG 377
           G  G G T     P  V SL G +    A G+WHT  +             S G ++ +G
Sbjct: 449 GVLGHGDTKSVSKPREVESLKGHRTVISACGVWHTAAVVEIMVGNPSSSNCSSGKLFTWG 508

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQ 437
               G+LG G  +A+ +P  + A  L + +   V+CG   T  +   G V+  G   YGQ
Sbjct: 509 DGDKGRLGHGDKEAKLVPTCVAA--LVDPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 566

Query: 438 LGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLL 472
           LG     D  +P++V   +       +ACG +H  +L
Sbjct: 567 LG-NPQADGKLPTRVEGKLAKSFVEEIACGAYHVAVL 602



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 74/138 (53%), Gaps = 6/138 (4%)

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D L P  + S + + ++ +A G  H   ++  G+++++G    G+LG G D     P+L+
Sbjct: 299 DSLLPKALESAVVLDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPKLI 358

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKY--GQLGLGDVIDRNIPSQVT--I 454
           D  SL N + + V+CG  HT  +   G ++ WG   Y  G LG G+ +   +P +V   +
Sbjct: 359 D--SLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 416

Query: 455 EGCVPRNVACGWWHTLLL 472
           EG    +++CG WHT ++
Sbjct: 417 EGIHVSSISCGPWHTAVV 434



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 102/241 (42%), Gaps = 43/241 (17%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSP-------------- 265
           G+ +++++ G  HT  ++  GQ++ +G G  G LG G   + VS P              
Sbjct: 418 GIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGD-TKSVSKPREVESLKGHRTVIS 476

Query: 266 -----HPIPCIESSYGKDRSAALSRGSVNSEGPGFR--------------------VPGN 300
                H    +E   G   S+  S G + + G G +                    V  N
Sbjct: 477 ACGVWHTAAVVEIMVGNPSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVDPN 536

Query: 301 YVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAG 360
           + + +ACG   +  +T +G + T G  +YGQ G    D +L       L    +E +A G
Sbjct: 537 FCR-VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPTRVEGKLAKSFVEEIACG 595

Query: 361 LWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            +H   ++S  +VY +G    G+LG G       P L++A  L++   KS++CG   TA 
Sbjct: 596 AYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEA--LKDKQVKSIACGTNFTAT 653

Query: 421 I 421
           I
Sbjct: 654 I 654


>gi|73952739|ref|XP_849808.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Canis lupus familiaris]
          Length = 1057

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 111/250 (44%), Gaps = 30/250 (12%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
            I  V+ G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +          
Sbjct: 85  NIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQ------ 138

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDE 340
                               +  +ACG  HS  ++ A  +  +G   YGQ G G     +
Sbjct: 139 --------------------IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQ 178

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
            SP  + SLLGI    VAAG  H+  ++  G ++ +G N+FGQLG   +    +P LL  
Sbjct: 179 ASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK- 237

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVP 459
            SL       + CG  HTA +  +G VF +G   YGQLG         P +V  + G + 
Sbjct: 238 -SLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 460 RNVACGWWHT 469
             +ACG  HT
Sbjct: 297 TQIACGRQHT 306



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 114/248 (45%), Gaps = 36/248 (14%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++I  VA G  H+LALS   +V+ WG    GQLGLG   +  +SP     I+S  G    
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQ---LIKSLLG---- 189

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTD 338
                           +P      +A GG HS V+T +GA+  FGWG   +GQ G    +
Sbjct: 190 ----------------IP---FMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDEN 228

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D   PN + SL   +I  +  G  HT  ++ +G V+ FG   +GQLG      E  PR  
Sbjct: 229 DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR-- 286

Query: 399 DAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC 457
               L       ++CG +HT A +   G+++ +G    GQLG G   +R  P   T++G 
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP--FTVKGN 344

Query: 458 -VPRNVAC 464
             P N  C
Sbjct: 345 WFPYNGQC 352



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLGT-GGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VFCWG NKYGQLGLG    +    Q+  ++ G     VA G  H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      +  ++  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 439 GL-----GDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALS 153



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 77/304 (25%), Positives = 124/304 (40%), Gaps = 48/304 (15%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D     + S +   +P      ++  IV+ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++  EV+ WG  +       +G L    GL  D  ++ S  L + +     
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK-------YGQL----GLGIDCKKQASPQLIKSLLGIPF 192

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           +  ++GG  S          G  R +              DEN    P L+      +I 
Sbjct: 193 MQVAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRTQKIV 245

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +                
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 288

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                     F + G+ V  IACG +H SA +  +G + +FG G  GQ G GST +  SP
Sbjct: 289 ----------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 344 NCVS 347
             V 
Sbjct: 339 FTVK 342


>gi|73952755|ref|XP_536367.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Canis lupus familiaris]
          Length = 1049

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 111/250 (44%), Gaps = 30/250 (12%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
            I  V+ G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +          
Sbjct: 85  NIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQ------ 138

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDE 340
                               +  +ACG  HS  ++ A  +  +G   YGQ G G     +
Sbjct: 139 --------------------IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQ 178

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
            SP  + SLLGI    VAAG  H+  ++  G ++ +G N+FGQLG   +    +P LL  
Sbjct: 179 ASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK- 237

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVP 459
            SL       + CG  HTA +  +G VF +G   YGQLG         P +V  + G + 
Sbjct: 238 -SLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 460 RNVACGWWHT 469
             +ACG  HT
Sbjct: 297 TQIACGRQHT 306



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 114/248 (45%), Gaps = 36/248 (14%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++I  VA G  H+LALS   +V+ WG    GQLGLG   +  +SP     I+S  G    
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQ---LIKSLLG---- 189

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTD 338
                           +P      +A GG HS V+T +GA+  FGWG   +GQ G    +
Sbjct: 190 ----------------IP---FMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDEN 228

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D   PN + SL   +I  +  G  HT  ++ +G V+ FG   +GQLG      E  PR  
Sbjct: 229 DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR-- 286

Query: 399 DAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC 457
               L       ++CG +HT A +   G+++ +G    GQLG G   +R  P   T++G 
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP--FTVKGN 344

Query: 458 -VPRNVAC 464
             P N  C
Sbjct: 345 WFPYNGQC 352



 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLGT-GGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VFCWG NKYGQLGLG    +    Q+  ++ G     VA G  H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      +  ++  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 439 GL-----GDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALS 153



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 77/304 (25%), Positives = 124/304 (40%), Gaps = 48/304 (15%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D     + S +   +P      ++  IV+ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++  EV+ WG  +       +G L    GL  D  ++ S  L + +     
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK-------YGQL----GLGIDCKKQASPQLIKSLLGIPF 192

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           +  ++GG  S          G  R +              DEN    P L+      +I 
Sbjct: 193 MQVAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRTQKIV 245

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +                
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 288

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                     F + G+ V  IACG +H SA +  +G + +FG G  GQ G GST +  SP
Sbjct: 289 ----------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 344 NCVS 347
             V 
Sbjct: 339 FTVK 342


>gi|301755904|ref|XP_002913788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Ailuropoda melanoleuca]
 gi|281346973|gb|EFB22557.1| hypothetical protein PANDA_001627 [Ailuropoda melanoleuca]
          Length = 1057

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 111/249 (44%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +           
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQ------- 138

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDEL 341
                              +  +ACG  HS  ++ A  +  +G   YGQ G G     + 
Sbjct: 139 -------------------IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQA 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  + SLLGI    VAAG  H+  ++  G ++ +G N+FGQLG   +    +P LL   
Sbjct: 180 SPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK-- 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL       + CG  HTA +  +G VF +G   YGQLG         P +V  + G +  
Sbjct: 238 SLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297

Query: 461 NVACGWWHT 469
            +ACG  HT
Sbjct: 298 QIACGRQHT 306



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 76/235 (32%), Positives = 108/235 (45%), Gaps = 33/235 (14%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++I  VA G  H+LALS   +V+ WG    GQLGLG   +  +SP     I+S  G    
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQ---LIKSLLG---- 189

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTD 338
                           +P      +A GG HS V+T +GA+  FGWG   +GQ G    +
Sbjct: 190 ----------------IP---FMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDEN 228

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D   PN + SL   +I  +  G  HT  ++ +G V+ FG   +GQLG      E  PR  
Sbjct: 229 DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR-- 286

Query: 399 DAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
               L       ++CG +HT A +   G+++ +G    GQLG G   +R  P  V
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLGT-GGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VFCWG NKYGQLGLG    +    Q+  ++ G     VA G  H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      +  ++  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 439 GL-----GDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALS 153



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 77/304 (25%), Positives = 124/304 (40%), Gaps = 48/304 (15%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D     + S +   +P      ++  IV+ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++  EV+ WG  +       +G L    GL  D  ++ S  L + +     
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK-------YGQL----GLGIDCKKQASPQLIKSLLGIPF 192

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           +  ++GG  S          G  R +              DEN    P L+      +I 
Sbjct: 193 MQVAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRTQKIV 245

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +                
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 288

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                     F + G+ V  IACG +H SA +  +G + +FG G  GQ G GST +  SP
Sbjct: 289 ----------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 344 NCVS 347
             V 
Sbjct: 339 FTVK 342


>gi|224055315|ref|XP_002298476.1| predicted protein [Populus trichocarpa]
 gi|222845734|gb|EEE83281.1| predicted protein [Populus trichocarpa]
          Length = 1109

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 64/171 (37%), Positives = 100/171 (58%), Gaps = 4/171 (2%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ IACGG+H+A++T  G + ++G    G+ G G   D L P  + +L    IE VA G 
Sbjct: 317 VQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPQLIEALSNTNIEFVACGE 376

Query: 362 WHTICISSDGDVYAFGG--NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
           +HT  ++  GD+Y +G     FG LG G + +  +P+ ++ P LE +H  S+SCG  HTA
Sbjct: 377 YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGP-LEGIHVSSISCGPWHTA 435

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
           V++  G++F +G   +G LG GD    ++P +V +++G      ACG WHT
Sbjct: 436 VVSSAGQLFTFGDGTFGVLGHGDRKSISLPREVESLKGLRTVQAACGVWHT 486



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 119/259 (45%), Gaps = 42/259 (16%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G+ +++++ G  HT  +S  GQ++ +G G  G LG G R + +S P  +  ++       
Sbjct: 421 GIHVSSISCGPWHTAVVSSAGQLFTFGDGTFGVLGHGDR-KSISLPREVESLK------- 472

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDA------------GALLTFGWG 327
                         G R         ACG  H+A + +             G L T+G G
Sbjct: 473 --------------GLRTVQ-----AACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDG 513

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG 387
             G+ G G  + +L P CVS+L+      VA G   TI  ++ G VY  G   +GQLG  
Sbjct: 514 DKGRLGHGDKEAKLVPTCVSALVEPNFCQVACGHSLTIARTTSGHVYTMGSPVYGQLGNP 573

Query: 388 GDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
               +   R+    S  +V  + ++CGA H AV+    +V+ WG    G+LG GD  D+N
Sbjct: 574 QSDGKLPARVEGKLSRSSV--EEIACGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDKN 631

Query: 448 IPSQV-TIEGCVPRNVACG 465
           +PS V  ++    +++ACG
Sbjct: 632 LPSLVEALKDKQVKSIACG 650



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 75/139 (53%), Gaps = 6/139 (4%)

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D L P  + S + + ++ +A G  H   ++  G+++++G    G+LG G D     P+L+
Sbjct: 302 DSLLPKALESAVVLDVQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPQLI 361

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKY--GQLGLGDVIDRNIPSQVT--I 454
           +A  L N + + V+CG  HT  +   G ++ WG   Y  G LG G+ +   +P +V   +
Sbjct: 362 EA--LSNTNIEFVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 419

Query: 455 EGCVPRNVACGWWHTLLLA 473
           EG    +++CG WHT +++
Sbjct: 420 EGIHVSSISCGPWHTAVVS 438



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 63/164 (38%), Gaps = 27/164 (16%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
           GD+     P  V+         VA G   T+A +  G V+  G    GQLG         
Sbjct: 521 GDKEAKLVPTCVSALVEPNFCQVACGHSLTIARTTSGHVYTMGSPVYGQLG--------- 571

Query: 264 SPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLT 323
                P  +          LSR SV                IACG  H AV+T    + T
Sbjct: 572 ----NPQSDGKLPARVEGKLSRSSVEE--------------IACGAYHVAVLTSKTEVYT 613

Query: 324 FGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI 367
           +G G  G+ G G TDD+  P+ V +L   Q++ +A G   T  I
Sbjct: 614 WGKGANGRLGHGDTDDKNLPSLVEALKDKQVKSIACGTNFTAAI 657


>gi|307106136|gb|EFN54383.1| hypothetical protein CHLNCDRAFT_13561, partial [Chlorella
           variabilis]
          Length = 171

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 64/169 (37%), Positives = 93/169 (55%), Gaps = 2/169 (1%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           +ACG RHS  +   G  L +GW L+ QCG+ +    + P+ V SL  +   GVA G+ HT
Sbjct: 2   VACGARHSLALNALGQCLAWGWSLHVQCGKSAPSVPM-PSVVQSLGPLTCVGVAGGMGHT 60

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           +  +  GDVYA+G N  GQLG G D +   P+L++  +L +     V+ G+RHT ++   
Sbjct: 61  VVCTDQGDVYAWGLNGDGQLGDGSDVSALEPKLVEDAALASESVTKVAAGSRHTLLLCAS 120

Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACGWWHTLLL 472
           G  F  GW  +GQLG G       P  V +  G    ++A GWWH+L+L
Sbjct: 121 GSAFACGWGAFGQLGSGTFASSRTPQAVAVPAGTKVTDIAAGWWHSLIL 169



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 25/143 (17%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
           VA G  HT+  +D G V+ WG  G+GQLG GS +           +E    +D  AAL+ 
Sbjct: 53  VAGGMGHTVVCTDQGDVYAWGLNGDGQLGDGSDVSA---------LEPKLVED--AALAS 101

Query: 286 GSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNC 345
            SV                +A G RH+ ++  +G+    GWG +GQ G G+     +P  
Sbjct: 102 ESVTK--------------VAAGSRHTLLLCASGSAFACGWGAFGQLGSGTFASSRTPQA 147

Query: 346 VSSLLGIQIEGVAAGLWHTICIS 368
           V+   G ++  +AAG WH++ ++
Sbjct: 148 VAVPAGTKVTDIAAGWWHSLILT 170


>gi|114659014|ref|XP_523159.2| PREDICTED: RCC1 domain-containing protein 1 isoform 2 [Pan
           troglodytes]
 gi|332844685|ref|XP_003314905.1| PREDICTED: RCC1 domain-containing protein 1 isoform 1 [Pan
           troglodytes]
 gi|410207948|gb|JAA01193.1| RCC1 domain containing 1 [Pan troglodytes]
 gi|410329461|gb|JAA33677.1| RCC1 domain containing 1 [Pan troglodytes]
          Length = 380

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 115/249 (46%), Gaps = 45/249 (18%)

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFR--VPGNYVKGIACGGRHSAVITDAGALLTFGW 326
           P  E+  G+      +R  V+   P +R   P    + +  G  H+ ++  AG + ++G 
Sbjct: 129 PAGEAQAGRLPLLPCARAYVSPRAPFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGG 188

Query: 327 GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLG- 385
           G +GQ G G+ + EL P  + +L G+ +  VAAG WH++C+S  GD+Y +G N+ GQL  
Sbjct: 189 GRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLAL 248

Query: 386 ----------------------------TGGDQ---------AETLPRLLDAPSLENVHS 408
                                       TGG +          +  P LLD P      +
Sbjct: 249 PTRNLAEDGETVAREATELNEDGSQVKRTGGAEDGAPAPFIAVQPFPALLDLPM--GSDA 306

Query: 409 KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI---EGCVPRNVACG 465
              SCG+RHTAV+   G+++ WGW KYGQLG  D    + P +V     +    + V CG
Sbjct: 307 VKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYFVDKQLQVKAVTCG 366

Query: 466 WWHTLLLAV 474
            W+T + AV
Sbjct: 367 PWNTYVYAV 375



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 78/173 (45%), Gaps = 15/173 (8%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P L+    G+ +A VAAGG H++ +S+ G ++ WG+   GQL L +R  +      +   
Sbjct: 205 PRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTR-NLAEDGETVARE 263

Query: 272 ESSYGKDRSAALSRGSVNSEGPG-----------FRVP-GNYVKGIACGGRHSAVITDAG 319
            +   +D S     G      P              +P G+     +CG RH+AV+T  G
Sbjct: 264 ATELNEDGSQVKRTGGAEDGAPAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTG 323

Query: 320 ALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG--IQIEGVAAGLWHTICISSD 370
            L T+GWG YGQ G   T     P  V   +   +Q++ V  G W+T   + +
Sbjct: 324 ELYTWGWGKYGQLGHEDTTSLDRPRRVEYFVDKQLQVKAVTCGPWNTYVYAVE 376



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 88/215 (40%), Gaps = 60/215 (27%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEI--------PEPFPLPTEASIVKA- 103
           G   A+ +  + ++ +WG            G+HG++         EP  L     +V A 
Sbjct: 170 GAEHALLLDAAGQVFSWGG-----------GRHGQLGHGTLEAELEPRLLEALQGLVMAE 218

Query: 104 -AAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGT---GLDKDVFERQSSFLTEQV 159
            AAG  H V V+E G++Y WGW E        G L+  T     D +   R+++ L E  
Sbjct: 219 VAAGGWHSVCVSETGDIYIWGWNES-------GQLALPTRNLAEDGETVAREATELNED- 270

Query: 160 SPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
              SQV R+ G            E+G+    I++                 FP L+ L  
Sbjct: 271 --GSQVKRTGGA-----------EDGAPAPFIAV---------------QPFPALLDLPM 302

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG 254
           G      + G RHT  ++  G+++ WG+G  GQLG
Sbjct: 303 GSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLG 337


>gi|351702482|gb|EHB05401.1| Putative E3 ubiquitin-protein ligase HERC4 [Heterocephalus glaber]
          Length = 1057

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 79/250 (31%), Positives = 113/250 (45%), Gaps = 30/250 (12%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
            I  V+ G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +          
Sbjct: 85  NIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQ------ 138

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDE 340
                               +  ++CG  HS  ++ A  + ++G   YGQ G G     +
Sbjct: 139 --------------------IVQVSCGYYHSLALSKASEVFSWGQNKYGQLGLGIDCKKQ 178

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
            SP  + SLLGI    VAAG  H+  ++  G ++ +G N+FGQLG   +    +P LL  
Sbjct: 179 TSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK- 237

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVP 459
            SL +     + CG  HTA +  +G VF +G   YGQLG         P +V  + G + 
Sbjct: 238 -SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 460 RNVACGWWHT 469
             +ACG  HT
Sbjct: 297 TQIACGRQHT 306



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/160 (34%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      +  ++  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 439 GL-----GDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      V+CG++H+L L+
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIV---QVSCGYYHSLALS 153



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 76/304 (25%), Positives = 125/304 (41%), Gaps = 48/304 (15%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D     + S +   +P      ++  IV+ +
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVS 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++  EV++WG  +       +G L    GL  D  ++ S  L + +     
Sbjct: 144 CGYYHSLALSKASEVFSWGQNK-------YGQL----GLGIDCKKQTSPQLIKSLLGIPF 192

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           +  ++GG  S          G  R +              DEN    P L+      +I 
Sbjct: 193 MQVAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRSQKIV 245

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +                
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 288

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                     F + G+ V  IACG +H SA +  +G + +FG G  GQ G GST +  SP
Sbjct: 289 ----------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 344 NCVS 347
             V 
Sbjct: 339 FTVK 342


>gi|426255642|ref|XP_004021457.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Ovis aries]
          Length = 979

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 79/249 (31%), Positives = 111/249 (44%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +           
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQ------- 138

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDEL 341
                              +  +ACG  HS  ++ A  +  +G   YGQ G G     + 
Sbjct: 139 -------------------IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQA 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  + SLLGI    +AAG  H+  ++  G ++ +G N+FGQLG   +    +P LL   
Sbjct: 180 SPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK-- 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL       + CG  HTA +  +G VF +G   YGQLG         P +V  + G +  
Sbjct: 238 SLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297

Query: 461 NVACGWWHT 469
            +ACG  HT
Sbjct: 298 QIACGRQHT 306



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLGT-GGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VFCWG NKYGQLGLG    +    Q+  ++ G     +A G  H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTL 207



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      +  ++  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 439 GL-----GDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALS 153



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 77/304 (25%), Positives = 124/304 (40%), Gaps = 48/304 (15%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D     + S +   +P      ++  IV+ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++  EV+ WG  +       +G L    GL  D  ++ S  L + +     
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK-------YGQL----GLGIDCKKQASPQLIKSLLGIPF 192

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           +  ++GG  S          G  R +              DEN    P L+      +I 
Sbjct: 193 MQIAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRTQKIV 245

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +                
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 288

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                     F + G+ V  IACG +H SA +  +G + +FG G  GQ G GST +  SP
Sbjct: 289 ----------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 344 NCVS 347
             V 
Sbjct: 339 FTVK 342


>gi|164448576|ref|NP_001070362.2| probable E3 ubiquitin-protein ligase HERC4 [Bos taurus]
 gi|296472143|tpg|DAA14258.1| TPA: hect domain and RLD 4 [Bos taurus]
          Length = 1057

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 79/249 (31%), Positives = 111/249 (44%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +           
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQ------- 138

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDEL 341
                              +  +ACG  HS  ++ A  +  +G   YGQ G G     + 
Sbjct: 139 -------------------IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQA 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  + SLLGI    +AAG  H+  ++  G ++ +G N+FGQLG   +    +P LL   
Sbjct: 180 SPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK-- 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL       + CG  HTA +  +G VF +G   YGQLG         P +V  + G +  
Sbjct: 238 SLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297

Query: 461 NVACGWWHT 469
            +ACG  HT
Sbjct: 298 QIACGRQHT 306



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLGT-GGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VFCWG NKYGQLGLG    +    Q+  ++ G     +A G  H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTL 207



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      +  ++  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 439 GL-----GDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALS 153



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 77/304 (25%), Positives = 124/304 (40%), Gaps = 48/304 (15%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D     + S +   +P      ++  IV+ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++  EV+ WG  +       +G L    GL  D  ++ S  L + +     
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK-------YGQL----GLGIDCKKQASPQLIKSLLGIPF 192

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           +  ++GG  S          G  R +              DEN    P L+      +I 
Sbjct: 193 MQIAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRTQKIV 245

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +                
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 288

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                     F + G+ V  IACG +H SA +  +G + +FG G  GQ G GST +  SP
Sbjct: 289 ----------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 344 NCVS 347
             V 
Sbjct: 339 FTVK 342


>gi|426255640|ref|XP_004021456.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Ovis aries]
          Length = 1049

 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 79/249 (31%), Positives = 111/249 (44%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +           
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQ------- 138

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDEL 341
                              +  +ACG  HS  ++ A  +  +G   YGQ G G     + 
Sbjct: 139 -------------------IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQA 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  + SLLGI    +AAG  H+  ++  G ++ +G N+FGQLG   +    +P LL   
Sbjct: 180 SPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK-- 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL       + CG  HTA +  +G VF +G   YGQLG         P +V  + G +  
Sbjct: 238 SLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297

Query: 461 NVACGWWHT 469
            +ACG  HT
Sbjct: 298 QIACGRQHT 306



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLGT-GGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VFCWG NKYGQLGLG    +    Q+  ++ G     +A G  H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTL 207



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      +  ++  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 439 GL-----GDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALS 153



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 77/304 (25%), Positives = 124/304 (40%), Gaps = 48/304 (15%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D     + S +   +P      ++  IV+ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++  EV+ WG  +       +G L    GL  D  ++ S  L + +     
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK-------YGQL----GLGIDCKKQASPQLIKSLLGIPF 192

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           +  ++GG  S          G  R +              DEN    P L+      +I 
Sbjct: 193 MQIAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRTQKIV 245

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +                
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 288

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                     F + G+ V  IACG +H SA +  +G + +FG G  GQ G GST +  SP
Sbjct: 289 ----------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 344 NCVS 347
             V 
Sbjct: 339 FTVK 342


>gi|380019055|ref|XP_003693433.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Apis florea]
          Length = 4812

 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 126/251 (50%), Gaps = 32/251 (12%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GG+H LALS  G V+ WG G +G+LG G+R+              SY  DR 
Sbjct: 4040 VKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRL--------------SY--DRP 4083

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
              +             + G  +  IACGG HSA IT AG L T+G G YG+ G G ++D+
Sbjct: 4084 KLIE-----------ELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQ 4132

Query: 341  LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L+P  + +L   ++  VA  +G   T+C++ D +V+++G   +G+LG GG     +P  +
Sbjct: 4133 LTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKIP--M 4190

Query: 399  DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGC 457
               SL  +    V CG++ +  +   G ++ WG   Y +LG G       P +V  ++G 
Sbjct: 4191 KIESLAGLGVVKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVRRPRKVAALQGK 4250

Query: 458  VPRNVACGWWH 468
               ++A G  H
Sbjct: 4251 KIISIATGSLH 4261



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 89/303 (29%), Positives = 131/303 (43%), Gaps = 80/303 (26%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            ++  +V +GG+H LAL+  G+V+ WG G +G+LG G+ I +   P  I  ++S   +D  
Sbjct: 3021 IKKVSVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNSISL-DKPRLIESLKSKRIRD-- 3077

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                    IACG  HSA IT +G L T+G G YG+ G G T  +
Sbjct: 3078 ------------------------IACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQ 3113

Query: 341  LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
              P  V SL+G +I  +A G     T+ +++DG VY++G   FG+LG GG      P L+
Sbjct: 3114 SKPKLVQSLVGQRIIQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRGGSDGCYTPLLI 3173

Query: 399  D----------------------------------------------APSL-ENVHSKSV 411
            D                                               P+L E +  K V
Sbjct: 3174 DRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKV 3233

Query: 412  ---SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWW 467
               + GA H   + D G+V+ WG N +GQ G G  I    PS V  ++      V+CG  
Sbjct: 3234 IHVAVGALHCLAVTDIGQVYAWGDNDHGQQGNGTTIVNKKPSLVHELDDARVNRVSCGSS 3293

Query: 468  HTL 470
            H++
Sbjct: 3294 HSI 3296



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 96/338 (28%), Positives = 138/338 (40%), Gaps = 60/338 (17%)

Query: 89   PEPFPLPTEASIVKAA--AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKD 146
            P+P P  ++  I K +  +G  H +A+T+ G+V++WG  E        G L  G  +  D
Sbjct: 3010 PKPIPFLSQYVIKKVSVHSGGKHALALTQDGKVFSWGEGE-------DGKLGHGNSISLD 3062

Query: 147  VFERQSSFLTEQVSPRSQVS-RSSGGTSSGTDGR-GSGEEGSKRRRISLAKQTAESSSSG 204
                  S  ++++   +  S  S+  TSSG     G GE G                  G
Sbjct: 3063 KPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRL--------------GHG 3108

Query: 205  DENLSAFPCLVTLNPGVRIATVAAGGR--HTLALSDIGQVWGWGYGGEGQLGLGSRIRMV 262
            D    + P LV    G RI  +A G R   T+AL+  G V+ WG G  G+LG G      
Sbjct: 3109 DTATQSKPKLVQSLVGQRIIQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRG------ 3162

Query: 263  SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITDAGA 320
                                   GS     P    R+ G  V  I CG + S  +T  G 
Sbjct: 3163 -----------------------GSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGE 3199

Query: 321  LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
            + T+G G Y + G G+      P  V  L G ++  VA G  H + ++  G VYA+G N 
Sbjct: 3200 VWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVIHVAVGALHCLAVTDIGQVYAWGDND 3259

Query: 381  FGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
             GQ G G       P L+    L++     VSCG+ H+
Sbjct: 3260 HGQQGNGTTIVNKKPSLVH--ELDDARVNRVSCGSSHS 3295



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 106/218 (48%), Gaps = 29/218 (13%)

Query: 226  VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
            +A G +    +S  G+++  G G  G+LGLG     V  P PIP + S Y       + +
Sbjct: 2972 IAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSN-VCEPKPIPFL-SQY------VIKK 3023

Query: 286  GSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNC 345
             SV+S                 GG+H+  +T  G + ++G G  G+ G G++     P  
Sbjct: 3024 VSVHS-----------------GGKHALALTQDGKVFSWGEGEDGKLGHGNSISLDKPRL 3066

Query: 346  VSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLEN 405
            + SL   +I  +A G  H+  I+S G++Y +G  ++G+LG G    ++ P+L+   SL  
Sbjct: 3067 IESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQSKPKLVQ--SLVG 3124

Query: 406  VHSKSVSCGAR--HTAVIADDGKVFCWGWNKYGQLGLG 441
                 ++CG+R   T  +  DG V+ WG   +G+LG G
Sbjct: 3125 QRIIQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRG 3162



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 96/326 (29%), Positives = 135/326 (41%), Gaps = 62/326 (19%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFL-TEQV 159
            V   +G  HC+A++  G VY+WG  +        G L  G  L  D  +     L TE V
Sbjct: 4043 VAVNSGGKHCLALSSEGHVYSWGEGD-------DGKLGHGNRLSYDRPKLIEELLGTEIV 4095

Query: 160  SPRSQVSRSSGGTSSG---TDGRGS-GEEGSKRRRISLAKQTAESSSSGDENLSAFPCLV 215
                    S+  TS+G   T G+G  G  G                  GD      P L+
Sbjct: 4096 DIACGGHHSAAITSAGWLYTWGKGRYGRLGH-----------------GDSEDQLTPKLI 4138

Query: 216  TLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPC-IE 272
                  ++  VA  +G   TL ++D   VW WG G  G+LG G      S    IP  IE
Sbjct: 4139 EALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGG-----SDGCKIPMKIE 4193

Query: 273  SSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQC 332
            S                       + G  V  + CG + S  +T +GA+ T+G G Y + 
Sbjct: 4194 S-----------------------LAGLGVVKVECGSQFSVALTRSGAIYTWGKGDYHRL 4230

Query: 333  GQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAE 392
            G G+ D    P  V++L G +I  +A G  H +  +  G+V+ +G N  GQLG G   A 
Sbjct: 4231 GHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSAL 4290

Query: 393  TLPRLLDAPSLENVHSKSVSCGARHT 418
              PRL+ A  L+      V+CG+ HT
Sbjct: 4291 QRPRLVHA--LQGKKITRVACGSAHT 4314



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 119/258 (46%), Gaps = 30/258 (11%)

Query: 211  FPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPC 270
             P L      +R   +  G +   A++  G+V+  GYG  G+LG+G     V  P  +  
Sbjct: 3976 LPVLCESLSALRPVQLTGGEQTLFAVTADGKVYATGYGAVGRLGIGG-TDSVMVPTLLES 4034

Query: 271  IESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
            I+  + K       + +VNS                 GG+H   ++  G + ++G G  G
Sbjct: 4035 IQHVFVK-------KVAVNS-----------------GGKHCLALSSEGHVYSWGEGDDG 4070

Query: 331  QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            + G G+      P  +  LLG +I  +A G  H+  I+S G +Y +G  ++G+LG G  +
Sbjct: 4071 KLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSE 4130

Query: 391  AETLPRLLDAPSLENVHSKSVSCGA--RHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNI 448
             +  P+L++A  L++     V+CG+    T  + DD  V+ WG   YG+LG G      I
Sbjct: 4131 DQLTPKLIEA--LQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKI 4188

Query: 449  PSQV-TIEGCVPRNVACG 465
            P ++ ++ G     V CG
Sbjct: 4189 PMKIESLAGLGVVKVECG 4206



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 117/256 (45%), Gaps = 32/256 (12%)

Query: 218 NPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI-----RMVSSPHPIPCIE 272
            P + IA+  + G H LAL+    V+ WG G  G+LG G R      +++ +        
Sbjct: 503 KPIIMIAS-HSDGTHYLALTQDNSVYSWGNGDGGRLGHGDRAWYDEPKLIEALVEKNITF 561

Query: 273 SSYGKDRSAALS---------RGSVNSEGPG----FRVP-------GNYVKGIACGG--R 310
            + G   SAALS         RG+    G G      +P       G+ V  +ACG    
Sbjct: 562 IACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDNVMIPTLVTALNGHMVVYVACGSGDS 621

Query: 311 HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
            +  +T +G + ++G G YG+ G+G  D   +P  V  LL I +  V  G   +  +++ 
Sbjct: 622 QTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAY 681

Query: 371 GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
           G+VY +G  +  +LG G +     P+++D    + V  K +  G  H   + +D  ++ W
Sbjct: 682 GEVYTWGKGEAYRLGHGNEDHVRYPKIIDILKTKKV--KELCVGNLHVLALTEDQLIYGW 739

Query: 431 GWNKYGQL--GLGDVI 444
           G N YGQ+   LG V+
Sbjct: 740 GRNDYGQIDPALGTVV 755



 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 64/232 (27%), Positives = 108/232 (46%), Gaps = 38/232 (16%)

Query: 240  GQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRV 297
            G ++GWG+   GQLG   G+++++     P+ C   S    R   L+             
Sbjct: 3953 GAIYGWGHNHRGQLGGLEGAKVKL-----PVLC--ESLSALRPVQLT------------- 3992

Query: 298  PGNYVKGIACGGRHSAV-ITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG 356
                      GG  +   +T  G +   G+G  G+ G G TD  + P  + S+  + ++ 
Sbjct: 3993 ----------GGEQTLFAVTADGKVYATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKK 4042

Query: 357  VA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
            VA  +G  H + +SS+G VY++G    G+LG G   +   P+L++   L       ++CG
Sbjct: 4043 VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLIE--ELLGTEIVDIACG 4100

Query: 415  ARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
              H+A I   G ++ WG  +YG+LG GD  D+  P  +  ++     +VACG
Sbjct: 4101 GHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLIEALQDYKVIDVACG 4152



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 87/164 (53%), Gaps = 5/164 (3%)

Query: 305  IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA--AGLW 362
            IA G +   V++  G L   G G  G+ G G   +   P  +  L    I+ V+  +G  
Sbjct: 2972 IAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVSVHSGGK 3031

Query: 363  HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIA 422
            H + ++ DG V+++G  + G+LG G   +   PRL++  SL++   + ++CG+ H+A I 
Sbjct: 3032 HALALTQDGKVFSWGEGEDGKLGHGNSISLDKPRLIE--SLKSKRIRDIACGSGHSAAIT 3089

Query: 423  DDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
              G+++ WG  +YG+LG GD   ++ P  V ++ G     +ACG
Sbjct: 3090 SSGELYTWGLGEYGRLGHGDTATQSKPKLVQSLVGQRIIQIACG 3133



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 66/125 (52%), Gaps = 4/125 (3%)

Query: 346  VSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLEN 405
            +S+L  +Q+ G    L+    +++DG VYA G    G+LG GG  +  +P LL++     
Sbjct: 3983 LSALRPVQLTGGEQTLF---AVTADGKVYATGYGAVGRLGIGGTDSVMVPTLLESIQHVF 4039

Query: 406  VHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVAC 464
            V   +V+ G +H   ++ +G V+ WG    G+LG G+ +  + P  +  + G    ++AC
Sbjct: 4040 VKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDIAC 4099

Query: 465  GWWHT 469
            G  H+
Sbjct: 4100 GGHHS 4104



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 63/125 (50%), Gaps = 4/125 (3%)

Query: 346  VSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLEN 405
            +S L  + I G +  L+    +S +G +YA G    G+LG G D     P+ +   S   
Sbjct: 2964 LSKLKPVHIAGGSKTLF---VVSQEGKLYACGEGTNGRLGLGDDSNVCEPKPIPFLSQYV 3020

Query: 406  VHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVAC 464
            +   SV  G +H   +  DGKVF WG  + G+LG G+ I  + P  + +++    R++AC
Sbjct: 3021 IKKVSVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNSISLDKPRLIESLKSKRIRDIAC 3080

Query: 465  GWWHT 469
            G  H+
Sbjct: 3081 GSGHS 3085



 Score = 42.0 bits (97), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 8/92 (8%)

Query: 37   RLPLTVGS-AWRDVCGGGCG--FAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEP 91
            ++P+ + S A   V    CG  F++A++ S  + TWG  D   LG     +  H   P  
Sbjct: 4187 KIPMKIESLAGLGVVKVECGSQFSVALTRSGAIYTWGKGDYHRLGHG---TDDHVRRPRK 4243

Query: 92   FPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
                    I+  A G  HCVA T+ GEV+TWG
Sbjct: 4244 VAALQGKKIISIATGSLHCVACTDKGEVFTWG 4275


>gi|270001313|gb|EEZ97760.1| hect domain and RLD 2-like protein [Tribolium castaneum]
          Length = 816

 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 77/227 (33%), Positives = 116/227 (51%), Gaps = 31/227 (13%)

Query: 230 GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVN 289
           G+H LAL+   +V+ WG G  G+LG G      S+      I++  GKD           
Sbjct: 524 GKHYLALTKDYEVYSWGNGDGGRLGHGD----TSTKEEPTLIQALKGKD----------- 568

Query: 290 SEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSL 349
                       +  + CGG +SA I+  GAL T+G G YG+ G G+ +D L+P  +S+L
Sbjct: 569 ------------IIDVECGGTYSAAISANGALYTWGRGNYGRLGHGTAEDCLTPTMISAL 616

Query: 350 LGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVH 407
               I  VA G +  HT+CI+S G VY++G   +G+LG GG     LPRL++   L+NV 
Sbjct: 617 SDEHIIKVACGSFYAHTLCITSQGKVYSWGDGDYGKLGRGGSDGSKLPRLIE--KLQNVK 674

Query: 408 SKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI 454
              V CGA+ +  +++DG V+ WG  +  +LG     +   P  V +
Sbjct: 675 IVQVYCGAQFSVALSEDGHVYTWGKGEGWKLGHPTEENVRFPEMVEV 721



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 104/250 (41%), Gaps = 29/250 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS------ 257
           GD +    P L+    G  I  V  GG ++ A+S  G ++ WG G  G+LG G+      
Sbjct: 550 GDTSTKEEPTLIQALKGKDIIDVECGGTYSAAISANGALYTWGRGNYGRLGHGTAEDCLT 609

Query: 258 --RIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPG-------------------FR 296
              I  +S  H I     S+        S+G V S G G                    +
Sbjct: 610 PTMISALSDEHIIKVACGSFYAHTLCITSQGKVYSWGDGDYGKLGRGGSDGSKLPRLIEK 669

Query: 297 VPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG 356
           +    +  + CG + S  +++ G + T+G G   + G  + ++   P  V  L   ++ G
Sbjct: 670 LQNVKIVQVYCGAQFSVALSEDGHVYTWGKGEGWKLGHPTEENVRFPEMVEVLRDRKVVG 729

Query: 357 VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR 416
           V+ G+ H + ++  G+VY +G N+  Q+    +     PRL++A  L+      V CG  
Sbjct: 730 VSLGVSHVLALTDQGEVYGWGKNENKQICDSSELFVQQPRLIEA--LKGQKVVGVCCGPA 787

Query: 417 HTAVIADDGK 426
            +    DD +
Sbjct: 788 QSFAWTDDNE 797



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 81/179 (45%), Gaps = 23/179 (12%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST---DDELSPNCVSSLLGIQIEGVA 358
           +K I C  R   ++T  G +    +    QC Q  T   D E+          I+I    
Sbjct: 473 IKQICCSDRTILILTQTGKVFFMYYSSDTQCPQEMTALDDKEV----------IKIAAHP 522

Query: 359 AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
            G  H + ++ D +VY++G    G+LG G    +  P L+ A  L+      V CG  ++
Sbjct: 523 EGK-HYLALTKDYEVYSWGNGDGGRLGHGDTSTKEEPTLIQA--LKGKDIIDVECGGTYS 579

Query: 419 AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI---EGCVPRNVACG--WWHTLLL 472
           A I+ +G ++ WG   YG+LG G   D   P+ ++    E  +   VACG  + HTL +
Sbjct: 580 AAISANGALYTWGRGNYGRLGHGTAEDCLTPTMISALSDEHII--KVACGSFYAHTLCI 636



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 102/231 (44%), Gaps = 27/231 (11%)

Query: 47  RDVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +D+    CG  ++ AIS +  L TWG   + G+    + +    P      ++  I+K A
Sbjct: 567 KDIIDVECGGTYSAAISANGALYTWGR-GNYGRLGHGTAEDCLTPTMISALSDEHIIKVA 625

Query: 105 AG--WAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPR 162
            G  +AH + +T  G+VY+WG  +    GR   D   G+ L + + E+  +    QV   
Sbjct: 626 CGSFYAHTLCITSQGKVYSWGDGDYGKLGRGGSD---GSKLPR-LIEKLQNVKIVQVYCG 681

Query: 163 SQVSRS-SGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGV 221
           +Q S + S      T G+G G +        L   T E+          FP +V +    
Sbjct: 682 AQFSVALSEDGHVYTWGKGEGWK--------LGHPTEENVR--------FPEMVEVLRDR 725

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIE 272
           ++  V+ G  H LAL+D G+V+GWG     Q+   S +  V  P  I  ++
Sbjct: 726 KVVGVSLGVSHVLALTDQGEVYGWGKNENKQICDSSEL-FVQQPRLIEALK 775



 Score = 38.9 bits (89), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 71/324 (21%), Positives = 119/324 (36%), Gaps = 63/324 (19%)

Query: 58  MAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTE 115
           +A++   ++ +WG+ D   LG    ++    E P          I+    G  +  A++ 
Sbjct: 528 LALTKDYEVYSWGNGDGGRLGHGDTSTK---EEPTLIQALKGKDIIDVECGGTYSAAISA 584

Query: 116 GGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSG 175
            G +YTWG          +G L  GT  D       S+   E +   +  S  +      
Sbjct: 585 NGALYTWGRGN-------YGRLGHGTAEDCLTPTMISALSDEHIIKVACGSFYAHTLCIT 637

Query: 176 TDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGR 231
           + G+    G G+ G   R              G  + S  P L+     V+I  V  G +
Sbjct: 638 SQGKVYSWGDGDYGKLGR--------------GGSDGSKLPRLIEKLQNVKIVQVYCGAQ 683

Query: 232 HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
            ++ALS+ G V+ WG G   +LG  +    V  P  +  +     +DR            
Sbjct: 684 FSVALSEDGHVYTWGKGEGWKLGHPTE-ENVRFPEMVEVL-----RDRK----------- 726

Query: 292 GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL---SPNCVSS 348
                     V G++ G  H   +TD G +  +GWG   +  Q     EL    P  + +
Sbjct: 727 ----------VVGVSLGVSHVLALTDQGEV--YGWG-KNENKQICDSSELFVQQPRLIEA 773

Query: 349 LLGIQIEGVAAGLWHTICISSDGD 372
           L G ++ GV  G   +   + D +
Sbjct: 774 LKGQKVVGVCCGPAQSFAWTDDNE 797


>gi|145593727|ref|YP_001158024.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
           CNB-440]
 gi|145303064|gb|ABP53646.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
           CNB-440]
          Length = 567

 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 127/425 (29%), Positives = 177/425 (41%), Gaps = 77/425 (18%)

Query: 63  SRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTW 122
           S  L+ WG  D+ GQ    S     +P    LP   ++   AAG  H +A+T  G V  W
Sbjct: 54  SEFLLAWGKNDN-GQLGNGSTTGSNVPIAVSLPLGTTVTAVAAGRFHSLALTSAGTVLAW 112

Query: 123 GWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG-------TSSG 175
           G          FG L  GT +D+      S+ +   + P + V+  + G       TS G
Sbjct: 113 GTNH-------FGQLGDGTLIDR------SAPVEVSLPPGTTVTAVAAGGVHSMALTSVG 159

Query: 176 T------DGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAG 229
           T      +G G   +GS  RR +                   P    L  GV +  VAA 
Sbjct: 160 TVLAWGGNGVGQLGDGSTTRRTT-------------------PVEAILPSGVTVTAVAAA 200

Query: 230 GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVN 289
             H+LA++  G    WG  G GQLG GS I                  +RS  +S     
Sbjct: 201 ESHSLAVTSAGAALAWGLNGTGQLGDGSTI------------------NRSTPVS----- 237

Query: 290 SEGPGFRVP-GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS 348
                  +P G  V  IA G  HS  +T  GA L +G+   GQ G G+T +  +P  V+ 
Sbjct: 238 -----VALPLGTEVTAIAAGRLHSLAVTSVGAALAWGYNGTGQLGDGTTINRSTPVSVAL 292

Query: 349 LLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHS 408
            LG ++  V AG  H+  +++ G   A+G N FGQLG GG    +    +  P+   + +
Sbjct: 293 PLGAEVTAVVAGRLHSAALTTAGTALAWGDNGFGQLGNGGGSNSSEAVEVSLPTGTTLAA 352

Query: 409 KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACGWW 467
            + S  + HT  IA DG    WG N +GQLG G   + + P  V +  G      A G  
Sbjct: 353 IA-SRDSDHTIAIAGDGTALAWGSNIFGQLGDGTTTNPSTPVPVALPTGITLLTTAAGSD 411

Query: 468 HTLLL 472
           HTL L
Sbjct: 412 HTLAL 416


>gi|440895825|gb|ELR47919.1| Putative E3 ubiquitin-protein ligase HERC4 [Bos grunniens mutus]
          Length = 1056

 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 79/249 (31%), Positives = 111/249 (44%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +           
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQ------- 138

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDEL 341
                              +  +ACG  HS  ++ A  +  +G   YGQ G G     + 
Sbjct: 139 -------------------IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQA 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  + SLLGI    +AAG  H+  ++  G ++ +G N+FGQLG   +    +P LL   
Sbjct: 180 SPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK-- 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL       + CG  HTA +  +G VF +G   YGQLG         P +V  + G +  
Sbjct: 238 SLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297

Query: 461 NVACGWWHT 469
            +ACG  HT
Sbjct: 298 QIACGRQHT 306



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLGT-GGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VFCWG NKYGQLGLG    +    Q+  ++ G     +A G  H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTL 207



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      +  ++  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 439 GL-----GDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALS 153



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 77/304 (25%), Positives = 124/304 (40%), Gaps = 48/304 (15%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D     + S +   +P      ++  IV+ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++  EV+ WG  +       +G L    GL  D  ++ S  L + +     
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK-------YGQL----GLGIDCKKQASPQLIKSLLGIPF 192

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           +  ++GG  S          G  R +              DEN    P L+      +I 
Sbjct: 193 MQIAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRTQKIV 245

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +                
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 288

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                     F + G+ V  IACG +H SA +  +G + +FG G  GQ G GST +  SP
Sbjct: 289 ----------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 344 NCVS 347
             V 
Sbjct: 339 FTVK 342


>gi|417405688|gb|JAA49548.1| Putative e3 ubiquitin-protein ligase herc4 [Desmodus rotundus]
          Length = 1049

 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 79/249 (31%), Positives = 112/249 (44%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +           
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDI-------- 137

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDEL 341
                              +  +ACG  HS  ++ A  + ++G   YGQ G G   + + 
Sbjct: 138 ------------------QIVQVACGYYHSLALSKASEVFSWGQNKYGQLGLGIDCNKQA 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  + SL GI    VAAG  H+  ++  G ++ +G N+FGQLG   +    +P LL   
Sbjct: 180 SPQLIKSLTGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK-- 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL       + CG  HTA +  +G VF +G   YGQLG         P +V  + G +  
Sbjct: 238 SLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297

Query: 461 NVACGWWHT 469
            +ACG  HT
Sbjct: 298 QIACGRQHT 306



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 118/251 (47%), Gaps = 34/251 (13%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
           ++  V  G RHT+ + D G V+  G    GQLG                    + K R  
Sbjct: 35  KVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG--------------------HEKSRKK 74

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ-GSTDDE 340
                +++++          +  ++CG  H+  + D G +  +G    GQ G  GS +  
Sbjct: 75  PEQVVALDAQN---------IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECI 125

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD-QAETLPRLLD 399
             P  + SL  IQI  VA G +H++ +S   +V+++G N++GQLG G D   +  P+L+ 
Sbjct: 126 RVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFSWGQNKYGQLGLGIDCNKQASPQLIK 185

Query: 400 APSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCV 458
             SL  +    V+ G  H+ V+   G +F WG NK+GQLGL D  DR +P+ + ++    
Sbjct: 186 --SLTGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK 243

Query: 459 PRNVACGWWHT 469
              + CG  HT
Sbjct: 244 IVYICCGEDHT 254



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLG-TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VF WG NKYGQLGLG   ++    Q+  ++ G     VA G  H+ +L +
Sbjct: 152 LSKASEVFSWGQNKYGQLGLGIDCNKQASPQLIKSLTGIPFMQVAAGGAHSFVLTL 207



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      +  ++  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 439 GL-----GDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALS 153



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 76/304 (25%), Positives = 125/304 (41%), Gaps = 48/304 (15%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D     + S +   +P      ++  IV+ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++  EV++WG  +       +G L  G   +K    + S  L + ++    
Sbjct: 144 CGYYHSLALSKASEVFSWGQNK-------YGQLGLGIDCNK----QASPQLIKSLTGIPF 192

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           +  ++GG  S          G  R +              DEN    P L+      +I 
Sbjct: 193 MQVAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRTQKIV 245

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +                
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 288

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                     F + G+ V  IACG +H SA +  +G + +FG G  GQ G GST +  SP
Sbjct: 289 ----------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 344 NCVS 347
             V 
Sbjct: 339 FTVK 342


>gi|63054858|ref|NP_291022.2| RCC1 domain-containing protein 1 [Homo sapiens]
 gi|63054860|ref|NP_001017919.1| RCC1 domain-containing protein 1 [Homo sapiens]
 gi|190360155|sp|A6NED2.1|RCCD1_HUMAN RecName: Full=RCC1 domain-containing protein 1
 gi|119622535|gb|EAX02130.1| RCC1 domain containing 1, isoform CRA_a [Homo sapiens]
 gi|119622537|gb|EAX02132.1| RCC1 domain containing 1, isoform CRA_a [Homo sapiens]
 gi|187954499|gb|AAI40709.1| RCC1 domain containing 1 [Homo sapiens]
 gi|187954599|gb|AAI40710.1| RCC1 domain containing 1 [Homo sapiens]
          Length = 376

 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 115/249 (46%), Gaps = 45/249 (18%)

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFR--VPGNYVKGIACGGRHSAVITDAGALLTFGW 326
           P  E+  G+      +R  V+   P +R   P    + +  G  H+ ++  AG + ++G 
Sbjct: 125 PAGEAQAGRLPLLPCARAYVSPRAPFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGG 184

Query: 327 GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLG- 385
           G +GQ G G+ + EL P  + +L G+ +  VAAG WH++C+S  GD+Y +G N+ GQL  
Sbjct: 185 GRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLAL 244

Query: 386 ----------------------------TGGDQ---------AETLPRLLDAPSLENVHS 408
                                       TGG +          +  P LLD P      +
Sbjct: 245 PTRNLAEDGETVAREATELNEDGSQVKRTGGAEDGAPAPFIAVQPFPALLDLPM--GSDA 302

Query: 409 KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI---EGCVPRNVACG 465
              SCG+RHTAV+   G+++ WGW KYGQLG  D    + P +V     +    + V CG
Sbjct: 303 VKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYFVDKQLQVKAVTCG 362

Query: 466 WWHTLLLAV 474
            W+T + AV
Sbjct: 363 PWNTYVYAV 371



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 78/173 (45%), Gaps = 15/173 (8%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P L+    G+ +A VAAGG H++ +S+ G ++ WG+   GQL L +R  +      +   
Sbjct: 201 PRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTR-NLAEDGETVARE 259

Query: 272 ESSYGKDRSAALSRGSVNSEGPG-----------FRVP-GNYVKGIACGGRHSAVITDAG 319
            +   +D S     G      P              +P G+     +CG RH+AV+T  G
Sbjct: 260 ATELNEDGSQVKRTGGAEDGAPAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTG 319

Query: 320 ALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG--IQIEGVAAGLWHTICISSD 370
            L T+GWG YGQ G   T     P  V   +   +Q++ V  G W+T   + +
Sbjct: 320 ELYTWGWGKYGQLGHEDTTSLDRPRRVEYFVDKQLQVKAVTCGPWNTYVYAVE 372



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 88/215 (40%), Gaps = 60/215 (27%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEI--------PEPFPLPTEASIVKA- 103
           G   A+ +  + ++ +WG            G+HG++         EP  L     +V A 
Sbjct: 166 GAEHALLLDAAGQVFSWGG-----------GRHGQLGHGTLEAELEPRLLEALQGLVMAE 214

Query: 104 -AAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGT---GLDKDVFERQSSFLTEQV 159
            AAG  H V V+E G++Y WGW E        G L+  T     D +   R+++ L E  
Sbjct: 215 VAAGGWHSVCVSETGDIYIWGWNES-------GQLALPTRNLAEDGETVAREATELNED- 266

Query: 160 SPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
              SQV R+ G            E+G+    I++                 FP L+ L  
Sbjct: 267 --GSQVKRTGGA-----------EDGAPAPFIAV---------------QPFPALLDLPM 298

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG 254
           G      + G RHT  ++  G+++ WG+G  GQLG
Sbjct: 299 GSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLG 333


>gi|426255638|ref|XP_004021455.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Ovis aries]
          Length = 1057

 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 79/249 (31%), Positives = 111/249 (44%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +           
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQ------- 138

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDEL 341
                              +  +ACG  HS  ++ A  +  +G   YGQ G G     + 
Sbjct: 139 -------------------IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQA 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  + SLLGI    +AAG  H+  ++  G ++ +G N+FGQLG   +    +P LL   
Sbjct: 180 SPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK-- 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL       + CG  HTA +  +G VF +G   YGQLG         P +V  + G +  
Sbjct: 238 SLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297

Query: 461 NVACGWWHT 469
            +ACG  HT
Sbjct: 298 QIACGRQHT 306



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLGT-GGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VFCWG NKYGQLGLG    +    Q+  ++ G     +A G  H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTL 207



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      +  ++  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 439 GL-----GDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALS 153



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 77/304 (25%), Positives = 124/304 (40%), Gaps = 48/304 (15%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D     + S +   +P      ++  IV+ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++  EV+ WG  +       +G L    GL  D  ++ S  L + +     
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK-------YGQL----GLGIDCKKQASPQLIKSLLGIPF 192

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           +  ++GG  S          G  R +              DEN    P L+      +I 
Sbjct: 193 MQIAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRTQKIV 245

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +                
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 288

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                     F + G+ V  IACG +H SA +  +G + +FG G  GQ G GST +  SP
Sbjct: 289 ----------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 344 NCVS 347
             V 
Sbjct: 339 FTVK 342


>gi|115304951|gb|AAI23843.1| Hect domain and RLD 4 [Bos taurus]
          Length = 853

 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 79/249 (31%), Positives = 111/249 (44%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +           
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQ------- 138

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDEL 341
                              +  +ACG  HS  ++ A  +  +G   YGQ G G     + 
Sbjct: 139 -------------------IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQA 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  + SLLGI    +AAG  H+  ++  G ++ +G N+FGQLG   +    +P LL   
Sbjct: 180 SPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK-- 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL       + CG  HTA +  +G VF +G   YGQLG         P +V  + G +  
Sbjct: 238 SLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297

Query: 461 NVACGWWHT 469
            +ACG  HT
Sbjct: 298 QIACGRQHT 306



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLGT-GGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VFCWG NKYGQLGLG    +    Q+  ++ G     +A G  H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTL 207



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      +  ++  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 439 GL-----GDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALS 153



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 77/304 (25%), Positives = 124/304 (40%), Gaps = 48/304 (15%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D     + S +   +P      ++  IV+ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++  EV+ WG  +       +G L    GL  D  ++ S  L + +     
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK-------YGQL----GLGIDCKKQASPQLIKSLLGIPF 192

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           +  ++GG  S          G  R +              DEN    P L+      +I 
Sbjct: 193 MQIAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRTQKIV 245

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +                
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 288

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                     F + G+ V  IACG +H SA +  +G + +FG G  GQ G GST +  SP
Sbjct: 289 ----------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 344 NCVS 347
             V 
Sbjct: 339 FTVK 342


>gi|297686828|ref|XP_002820940.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Pongo abelii]
          Length = 979

 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 113/249 (45%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +           
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQ------- 138

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDEL 341
                              +  +ACG  HS  ++ A  +  +G   YGQ G G+    + 
Sbjct: 139 -------------------IVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQT 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  + SLLGI    VAAG  H+  ++  G ++ +G N+FGQLG   +    +P LL   
Sbjct: 180 SPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK-- 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL +     + CG  HTA +  +G VF +G   YGQLG         P +V  + G +  
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297

Query: 461 NVACGWWHT 469
            +ACG  HT
Sbjct: 298 QIACGRQHT 306



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 115/248 (46%), Gaps = 36/248 (14%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++I  VA G  H+LALS   +V+ WG    GQLGLG+  +  +SP     ++S  G    
Sbjct: 137 IQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQ---LLKSLLG---- 189

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTD 338
                           +P      +A GG HS V+T +GA+  FGWG   +GQ G    +
Sbjct: 190 ----------------IP---FMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDEN 228

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D   PN + SL   +I  +  G  HT  ++ +G V+ FG   +GQLG      E  PR  
Sbjct: 229 DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR-- 286

Query: 399 DAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC 457
               L       ++CG +HT A +   G+++ +G    GQLG G   +R  P   T++G 
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP--FTVKGN 344

Query: 458 -VPRNVAC 464
             P N  C
Sbjct: 345 WYPYNGQC 352



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLG-TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPR--NIKSLSDIQIVQVACGYCHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VFCWG NKYGQLGLG    +    Q+  ++ G     VA G  H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 81/160 (50%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      +  ++  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 439 GLGDV-----IDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG+ H+L L+
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIV---QVACGYCHSLALS 153



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 124/304 (40%), Gaps = 48/304 (15%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D     V S +   +P      ++  IV+ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++  EV+ WG  +       +G L  GT    D  ++ S  L + +     
Sbjct: 144 CGYCHSLALSKASEVFCWGQNK-------YGQLGLGT----DCKKQTSPQLLKSLLGIPF 192

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           +  ++GG  S          G  R +              DEN    P L+      +I 
Sbjct: 193 MQVAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRSQKIV 245

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +                
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 288

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                     F + G+ V  IACG +H SA +  +G + +FG G  GQ G GST +  SP
Sbjct: 289 ----------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 344 NCVS 347
             V 
Sbjct: 339 FTVK 342


>gi|403377072|gb|EJY88530.1| hypothetical protein OXYTRI_12294 [Oxytricha trifallax]
          Length = 709

 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 85/282 (30%), Positives = 127/282 (45%), Gaps = 48/282 (17%)

Query: 215 VTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESS 274
           V L   + I  VA G  HTLALS  GQV+ WG     + G  S+ R  ++ +    ++S 
Sbjct: 165 VELLTQIFIKQVACGDYHTLALSKEGQVYVWGGSLHNKRGDRSQERKDNAKYKPVLLQSF 224

Query: 275 YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
            GK                        +K I CG  HS  + D G L ++G G  G+CG 
Sbjct: 225 AGKK-----------------------IKQIDCGDFHSLALDDNGTLYSWGVGEKGECGH 261

Query: 335 GSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL 394
           G  +D+ +P  +    G  I  + AG  HT+ I++D  VYA+G  ++GQ G G  +   +
Sbjct: 262 GKFEDQETPQRIKFFDGKIITQIEAGNHHTLAITADNQVYAWGDGRYGQCGFGEFENTAI 321

Query: 395 PRLLDAPSLENVHS--------------------KSVSCGARHTAVIADDGKVFCWGWNK 434
           P+L++ PS  N  S                    K ++ G  HT V+   G++F +G+N+
Sbjct: 322 PQLVNFPSQGNNTSYLDDSVQQEILEFFKDPPKIKQIAAGEMHTLVLTSSGQIFSFGYNQ 381

Query: 435 YGQLGLGDVIDRNIPSQVTIEGCVPR---NVACGWWHTLLLA 473
            GQLG   V +   P    +EG +      VA G  H+L L 
Sbjct: 382 QGQLGHNTVDNYCRPK--LVEGMLNHKTVQVAAGRNHSLCLT 421



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 96/359 (26%), Positives = 150/359 (41%), Gaps = 37/359 (10%)

Query: 73  DDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGR 132
           D LG   +T+G      +P  L T+  I + A G  H +A+++ G+VY WG       G 
Sbjct: 147 DKLGLEGITTGSKKTF-KPVELLTQIFIKQVACGDYHTLALSKEGQVYVWG-------GS 198

Query: 133 VFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGS------GEEGS 186
           +       +   KD  + +   L      + +        S   D  G+      GE+G 
Sbjct: 199 LHNKRGDRSQERKDNAKYKPVLLQSFAGKKIKQIDCGDFHSLALDDNGTLYSWGVGEKGE 258

Query: 187 KRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWG 246
                            G       P  +    G  I  + AG  HTLA++   QV+ WG
Sbjct: 259 --------------CGHGKFEDQETPQRIKFFDGKIITQIEAGNHHTLAITADNQVYAWG 304

Query: 247 YGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIA 306
            G  GQ G G           IP + +   +  + +    SV  E   F      +K IA
Sbjct: 305 DGRYGQCGFGE-----FENTAIPQLVNFPSQGNNTSYLDDSVQQEILEFFKDPPKIKQIA 359

Query: 307 CGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC 366
            G  H+ V+T +G + +FG+   GQ G  + D+   P  V  +L  +   VAAG  H++C
Sbjct: 360 AGEMHTLVLTSSGQIFSFGYNQQGQLGHNTVDNYCRPKLVEGMLNHKTVQVAAGRNHSLC 419

Query: 367 ISSDGDVYAFGGNQFGQLGT-GGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           +++  DVYA G NQ+GQ G    +  +T   +L   SL +V+S  +  G  H+ V+ D+
Sbjct: 420 LTNKNDVYACGNNQYGQCGLPDREMRKTFSHVL---SLLSVNSFKLYAGGFHSWVVLDE 475



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 38/160 (23%), Positives = 72/160 (45%), Gaps = 15/160 (9%)

Query: 323 TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFG 382
           +FG    G+ G G  ++ L P  V  L  +++  +++G  H+  ++ DG ++  G N   
Sbjct: 88  SFGQNTKGELGTGHYNEVLMPERVRGLPKLKVIFLSSGGKHSGLVTEDGKLWMCGSNLHD 147

Query: 383 QLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGD 442
           +LG  G    +         L  +  K V+CG  HT  ++ +G+V+ WG + + + G   
Sbjct: 148 KLGLEGITTGSKKTFKPVELLTQIFIKQVACGDYHTLALSKEGQVYVWGGSLHNKRG--- 204

Query: 443 VIDRNIPSQ----------VTIEGCVPRNVACGWWHTLLL 472
             DR+   +           +  G   + + CG +H+L L
Sbjct: 205 --DRSQERKDNAKYKPVLLQSFAGKKIKQIDCGDFHSLAL 242



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 7/105 (6%)

Query: 373 VYAFGGNQFGQLGTGGDQAETLP-RLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWG 431
           V++FG N  G+LGTG      +P R+   P L+ +    +S G +H+ ++ +DGK++  G
Sbjct: 86  VWSFGQNTKGELGTGHYNEVLMPERVRGLPKLKVIF---LSSGGKHSGLVTEDGKLWMCG 142

Query: 432 WNKYGQLGLGDVI---DRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
            N + +LGL  +     +       +     + VACG +HTL L+
Sbjct: 143 SNLHDKLGLEGITTGSKKTFKPVELLTQIFIKQVACGDYHTLALS 187


>gi|332218229|ref|XP_003258261.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Nomascus leucogenys]
          Length = 979

 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 79/249 (31%), Positives = 113/249 (45%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +           
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDI-------- 137

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDEL 341
                              +  +ACG  HS  ++ A  +  +G   YGQ G G+    + 
Sbjct: 138 ------------------QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQT 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  + SL+GI    VAAG  H+  ++  G ++ +G N+FGQLG   +    +P LL   
Sbjct: 180 SPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK-- 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL +     + CG  HTA +  +G VF +G   YGQLG         P +V  + G +  
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297

Query: 461 NVACGWWHT 469
            +ACG  HT
Sbjct: 298 QIACGRQHT 306



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 115/248 (46%), Gaps = 36/248 (14%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++I  VA G  H+LALS   +V+ WG    GQLGLG+  +  +SP     ++S  G    
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQ---LLKSLVG---- 189

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTD 338
                           +P      +A GG HS V+T +GA+  FGWG   +GQ G    +
Sbjct: 190 ----------------IP---FMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDEN 228

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D   PN + SL   +I  +  G  HT  ++ +G V+ FG   +GQLG      E  PR  
Sbjct: 229 DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR-- 286

Query: 399 DAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC 457
               L       ++CG +HT A +   G+++ +G    GQLG G   +R  P   T++G 
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP--FTVKGN 344

Query: 458 -VPRNVAC 464
             P N  C
Sbjct: 345 WYPYNGQC 352



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLGT-GGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VFCWG NKYGQLGLG    +    Q+  ++ G     VA G  H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTL 207



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      +  ++  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 439 GL-----GDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALS 153



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 80/305 (26%), Positives = 123/305 (40%), Gaps = 50/305 (16%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D     + S +   +P      ++  IV+ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS-PRS 163
            G+ H +A+++  EV+ WG  +       +G L  GT   K   +     L   V  P  
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK-------YGQLGLGTDCKK---QTSPQLLKSLVGIPFM 193

Query: 164 QVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRI 223
           QV  ++GG  S          G  R +              DEN    P L+      +I
Sbjct: 194 QV--AAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRSQKI 244

Query: 224 ATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAAL 283
             +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +               
Sbjct: 245 VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV--------------- 288

Query: 284 SRGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                      F + G+ V  IACG +H SA +  +G + +FG G  GQ G GST +  S
Sbjct: 289 -----------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKS 337

Query: 343 PNCVS 347
           P  V 
Sbjct: 338 PFTVK 342


>gi|281212541|gb|EFA86701.1| hypothetical protein PPL_00504 [Polysphondylium pallidum PN500]
          Length = 237

 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 85/253 (33%), Positives = 125/253 (49%), Gaps = 30/253 (11%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
           VAAG  H+LAL+D G ++GWG+  +GQLG  S  +    P P+P                
Sbjct: 2   VAAGWGHSLALTDNGAIYGWGWTNDGQLGSISNEK--DKPVPLP---------------- 43

Query: 286 GSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNC 345
             ++ E P F   GN V GI  G  +S  +T  G L+++G G +GQ G G      +P  
Sbjct: 44  KEISMEQPEFS--GNIV-GIYAGSDYSMSLTRDGRLISWGSGEFGQLGHGDCQHSNTPTA 100

Query: 346 VSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLEN 405
           ++    I+   V+ G  HT+ I S GD+Y FG N  GQLG G     ++P L+D      
Sbjct: 101 INGFEAIRF--VSCGFSHTMIIDSKGDLYTFGWNGSGQLGLGDKSNRSVPTLVDPMLFCG 158

Query: 406 VHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR-NIPSQV------TIEGCV 458
              K V+ G  H+  + + G++F WG    G+LG GD  +   +P+Q+       IE   
Sbjct: 159 EKLKMVAAGRAHSVALTESGRLFTWGSGSKGKLGNGDTSNELLVPTQLYDIDENQIETPK 218

Query: 459 PRNVACGWWHTLL 471
             N+A G+ HTL+
Sbjct: 219 VVNIATGFDHTLI 231



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 74/274 (27%), Positives = 107/274 (39%), Gaps = 54/274 (19%)

Query: 103 AAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPR 162
            AAGW H +A+T+ G +Y WGW      G +  +      L K++   Q  F    V   
Sbjct: 2   VAAGWGHSLALTDNGAIYGWGWTNDGQLGSISNEKDKPVPLPKEISMEQPEFSGNIVGIY 61

Query: 163 SQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLN 218
           +    S   T    DGR    GSGE G                  GD   S  P  +   
Sbjct: 62  AGSDYSMSLTR---DGRLISWGSGEFGQLGH--------------GDCQHSNTPTAINGF 104

Query: 219 PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
             +R   V+ G  HT+ +   G ++ +G+ G GQLGLG +     S   +P +       
Sbjct: 105 EAIRF--VSCGFSHTMIIDSKGDLYTFGWNGSGQLGLGDK-----SNRSVPTLVDP---- 153

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
                               G  +K +A G  HS  +T++G L T+G G  G+ G G T 
Sbjct: 154 ----------------MLFCGEKLKMVAAGRAHSVALTESGRLFTWGSGSKGKLGNGDTS 197

Query: 339 DE-LSPNCVSSLLGIQIE-----GVAAGLWHTIC 366
           +E L P  +  +   QIE      +A G  HT+ 
Sbjct: 198 NELLVPTQLYDIDENQIETPKVVNIATGFDHTLI 231


>gi|410300174|gb|JAA28687.1| RCC1 domain containing 1 [Pan troglodytes]
          Length = 378

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 115/249 (46%), Gaps = 45/249 (18%)

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFR--VPGNYVKGIACGGRHSAVITDAGALLTFGW 326
           P  E+  G+      +R  V+   P +R   P    + +  G  H+ ++  AG + ++G 
Sbjct: 127 PAGEAQAGRLPLLPCARAYVSPRAPFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGG 186

Query: 327 GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLG- 385
           G +GQ G G+ + EL P  + +L G+ +  VAAG WH++C+S  GD+Y +G N+ GQL  
Sbjct: 187 GRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLAL 246

Query: 386 ----------------------------TGGDQ---------AETLPRLLDAPSLENVHS 408
                                       TGG +          +  P LLD P      +
Sbjct: 247 PTRNLAEDGETVAREATELNEDGSQVKRTGGAEDGAPAPFIAVQPFPALLDLPM--GSDA 304

Query: 409 KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI---EGCVPRNVACG 465
              SCG+RHTAV+   G+++ WGW KYGQLG  D    + P +V     +    + V CG
Sbjct: 305 VKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYFVDKQLQVKAVTCG 364

Query: 466 WWHTLLLAV 474
            W+T + AV
Sbjct: 365 PWNTYVYAV 373



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 78/173 (45%), Gaps = 15/173 (8%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P L+    G+ +A VAAGG H++ +S+ G ++ WG+   GQL L +R  +      +   
Sbjct: 203 PRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTR-NLAEDGETVARE 261

Query: 272 ESSYGKDRSAALSRGSVNSEGPG-----------FRVP-GNYVKGIACGGRHSAVITDAG 319
            +   +D S     G      P              +P G+     +CG RH+AV+T  G
Sbjct: 262 ATELNEDGSQVKRTGGAEDGAPAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTG 321

Query: 320 ALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG--IQIEGVAAGLWHTICISSD 370
            L T+GWG YGQ G   T     P  V   +   +Q++ V  G W+T   + +
Sbjct: 322 ELYTWGWGKYGQLGHEDTTSLDRPRRVEYFVDKQLQVKAVTCGPWNTYVYAVE 374



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 88/215 (40%), Gaps = 60/215 (27%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEI--------PEPFPLPTEASIVKA- 103
           G   A+ +  + ++ +WG            G+HG++         EP  L     +V A 
Sbjct: 168 GAEHALLLDAAGQVFSWGG-----------GRHGQLGHGTLEAELEPRLLEALQGLVMAE 216

Query: 104 -AAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGT---GLDKDVFERQSSFLTEQV 159
            AAG  H V V+E G++Y WGW E        G L+  T     D +   R+++ L E  
Sbjct: 217 VAAGGWHSVCVSETGDIYIWGWNES-------GQLALPTRNLAEDGETVAREATELNED- 268

Query: 160 SPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
              SQV R+ G            E+G+    I++                 FP L+ L  
Sbjct: 269 --GSQVKRTGGA-----------EDGAPAPFIAV---------------QPFPALLDLPM 300

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG 254
           G      + G RHT  ++  G+++ WG+G  GQLG
Sbjct: 301 GSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLG 335


>gi|338534909|ref|YP_004668243.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
 gi|337261005|gb|AEI67165.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
          Length = 862

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 111/386 (28%), Positives = 158/386 (40%), Gaps = 53/386 (13%)

Query: 91  PFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFER 150
           P  +P    +   AAG  H +AV + G V+ WG           G L  GT  ++     
Sbjct: 200 PVQVPGLTGVTAIAAGDYHTLAVRQDGTVWAWG-------NNALGQLGDGTYTER----- 247

Query: 151 QSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSA 210
                  QV   + V+  S G S     R  G         +           G      
Sbjct: 248 ---LTPVQVPGLTGVTAISAGESHTVAVRQDGTV------WAWGDNVWGQLGDGTRTDRL 298

Query: 211 FPCLVTLNPGVR-IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP 269
            P  V   PG+  +  +A G RHT A+   G VW WG    GQLG G+R   ++ P  +P
Sbjct: 299 TPVQV---PGLSGVTAIAEGRRHTFAVRQDGTVWAWGLNFWGQLGDGTRSDRLT-PVQVP 354

Query: 270 CIES---------------------SYGKDRSAALSRGSVNSEGPGFRVPG-NYVKGIAC 307
            + S                     ++G +    L  G+        +VPG   V  IA 
Sbjct: 355 DLTSVTAIAAGDYHTLAVRQDGTVWAWGDNVWGQLGDGTYTDRLTPVQVPGLTGVTAIAA 414

Query: 308 GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI 367
           G  H+  +   G +  +G  ++GQ G G+  D L+P  V  L    +  +AAG +HT+ +
Sbjct: 415 GESHTVAMRQDGTVWAWGDNVWGQLGDGTYTDRLTPVQVPDL--TSVTAIAAGDYHTLAV 472

Query: 368 SSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHS-KSVSCGARHTAVIADDGK 426
             DG V A+G N +GQLG G       P ++  P L  V    +++ G  HT  +  DG 
Sbjct: 473 RQDGTVCAWGFNAYGQLGDGTSSRSPSPVMV--PGLTGVTVFAALAAGDSHTVAVMQDGT 530

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQV 452
           V+ WG N  GQLG G  IDR IP Q+
Sbjct: 531 VWAWGLNASGQLGDGATIDRRIPVQI 556



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 111/392 (28%), Positives = 159/392 (40%), Gaps = 68/392 (17%)

Query: 91  PFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFER 150
           P  +P    +   AAG  H  AV + G V+ WG         V+G L  GT         
Sbjct: 50  PVQVPGLTGVTAVAAGRHHTFAVRQDGTVWAWGLN-------VWGQLGDGT--------- 93

Query: 151 QSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSA 210
                TE+ +P  QV   +G T+            + RR      Q     + GD +   
Sbjct: 94  ----HTERHTP-VQVPGLTGVTAIA----------AGRRHTFAVSQDGTVWAWGDNDWGQ 138

Query: 211 F--------PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMV 262
                       V L     +  +AAG RHT A+   G VW WG    GQLG G+R   +
Sbjct: 139 LGDGTRADRHTPVQLPELTGVTAIAAGRRHTFAVRQDGTVWAWGDNAWGQLGDGTRTNRL 198

Query: 263 SSPHPIPCIES---------------------SYGKDRSAALSRGSVNSEGPGFRVPG-N 300
           + P  +P +                       ++G +    L  G+        +VPG  
Sbjct: 199 T-PVQVPGLTGVTAIAAGDYHTLAVRQDGTVWAWGNNALGQLGDGTYTERLTPVQVPGLT 257

Query: 301 YVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAG 360
            V  I+ G  H+  +   G +  +G  ++GQ G G+  D L+P  V  L G  +  +A G
Sbjct: 258 GVTAISAGESHTVAVRQDGTVWAWGDNVWGQLGDGTRTDRLTPVQVPGLSG--VTAIAEG 315

Query: 361 LWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
             HT  +  DG V+A+G N +GQLG G       P  +  P L +V   +++ G  HT  
Sbjct: 316 RRHTFAVRQDGTVWAWGLNFWGQLGDGTRSDRLTP--VQVPDLTSV--TAIAAGDYHTLA 371

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
           +  DG V+ WG N +GQLG G   DR  P QV
Sbjct: 372 VRQDGTVWAWGDNVWGQLGDGTYTDRLTPVQV 403



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 119/256 (46%), Gaps = 29/256 (11%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS---RIRMVSSP-------------H 266
           +  +AAG  HTLA    G VW WG    GQLG G+   R+  V  P             H
Sbjct: 562 VTAIAAGSAHTLAAGQDGAVWSWGANSYGQLGDGTTTHRLSPVQVPGLTGVSAMAAGDAH 621

Query: 267 PIPCIE----SSYGKDRSAALSRGSVNSEGPGFRVPG-NYVKGIACGGRHSAVITDAGAL 321
            +  ++    S++G++    L  G+  +     +V G   V  +A G  H+  +   G +
Sbjct: 622 SVALLQDGTVSAWGRNSWGQLGDGTTAARLTPVQVHGLTGVTAVAAGSLHTVALRQDGTV 681

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             +G+   GQ G G+T   L+P  V  L    +  +AAG +HT+ +  DG V+A+G N +
Sbjct: 682 WAWGYNDLGQLGDGTTTRRLAPVQVQGL--TDVTAIAAGYFHTVAVRQDGTVWAWGYNLW 739

Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
           GQLG G   A + P  +    L  V   +++ G  HT  +  DG V+ WG N   QLG G
Sbjct: 740 GQLGDGSSTARSTP--VQVQELTGV--SALAAGYAHTVAVKQDGTVWAWGNNSGTQLGNG 795

Query: 442 DVIDRNIPSQVTIEGC 457
              DR  P  V +EG 
Sbjct: 796 SSTDRYTP--VWVEGL 809



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 150/365 (41%), Gaps = 58/365 (15%)

Query: 91  PFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFER 150
           P  +P  A +   AAG AH +A  + G V++WG          +G L  GT        R
Sbjct: 553 PVQIPGLAGVTAIAAGSAHTLAAGQDGAVWSWG-------ANSYGQLGDGT-----TTHR 600

Query: 151 QSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSA 210
            S     QV   + VS  + G +        G   +  R              GD   +A
Sbjct: 601 LSPV---QVPGLTGVSAMAAGDAHSVALLQDGTVSAWGRN--------SWGQLGDGTTAA 649

Query: 211 FPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPC 270
               V ++    +  VAAG  HT+AL   G VW WGY   GQLG G+  R ++ P  +  
Sbjct: 650 RLTPVQVHGLTGVTAVAAGSLHTVALRQDGTVWAWGYNDLGQLGDGTTTRRLA-PVQVQG 708

Query: 271 IESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
           +                              V  IA G  H+  +   G +  +G+ L+G
Sbjct: 709 LTD----------------------------VTAIAAGYFHTVAVRQDGTVWAWGYNLWG 740

Query: 331 QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
           Q G GS+    +P  V  L G+    +AAG  HT+ +  DG V+A+G N   QLG G   
Sbjct: 741 QLGDGSSTARSTPVQVQELTGV--SALAAGYAHTVAVKQDGTVWAWGNNSGTQLGNGSST 798

Query: 391 AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
               P  ++   L  V   +++ G  HTA ++ +G  + WG N +GQ+G G   DR  P 
Sbjct: 799 DRYTPVWVEG--LTGV--SALTAGRFHTAAVSPEGFGWAWGRNNFGQVGDGTTADRPRPV 854

Query: 451 QVTIE 455
            V I+
Sbjct: 855 DVVIQ 859



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 113/251 (45%), Gaps = 38/251 (15%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +    AG  HT+A+   G  W WG    GQLG G+R   + +P  +P +           
Sbjct: 9   VTATTAGEYHTVAVRQDGTAWAWGNNAWGQLGDGTRTDRL-TPVQVPGLTG--------- 58

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                              V  +A G  H+  +   G +  +G  ++GQ G G+  +  +
Sbjct: 59  -------------------VTAVAAGRHHTFAVRQDGTVWAWGLNVWGQLGDGTHTERHT 99

Query: 343 PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPS 402
           P  V  L G  +  +AAG  HT  +S DG V+A+G N +GQLG G       P  L  P 
Sbjct: 100 PVQVPGLTG--VTAIAAGRRHTFAVSQDGTVWAWGDNDWGQLGDGTRADRHTPVQL--PE 155

Query: 403 LENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRN 461
           L  V   +++ G RHT  +  DG V+ WG N +GQLG G   +R  P QV  + G     
Sbjct: 156 LTGV--TAIAAGRRHTFAVRQDGTVWAWGDNAWGQLGDGTRTNRLTPVQVPGLTGVTA-- 211

Query: 462 VACGWWHTLLL 472
           +A G +HTL +
Sbjct: 212 IAAGDYHTLAV 222



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 58/159 (36%), Positives = 80/159 (50%), Gaps = 7/159 (4%)

Query: 295 FRVPG-NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ 353
            +VPG   V     G  H+  +   G    +G   +GQ G G+  D L+P  V  L G+ 
Sbjct: 1   MQVPGLTGVTATTAGEYHTVAVRQDGTAWAWGNNAWGQLGDGTRTDRLTPVQVPGLTGV- 59

Query: 354 IEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSC 413
              VAAG  HT  +  DG V+A+G N +GQLG G       P  +  P L  V   +++ 
Sbjct: 60  -TAVAAGRHHTFAVRQDGTVWAWGLNVWGQLGDGTHTERHTP--VQVPGLTGV--TAIAA 114

Query: 414 GARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
           G RHT  ++ DG V+ WG N +GQLG G   DR+ P Q+
Sbjct: 115 GRRHTFAVSQDGTVWAWGDNDWGQLGDGTRADRHTPVQL 153


>gi|66810824|ref|XP_639119.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
 gi|60467743|gb|EAL65761.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
          Length = 2083

 Score =  115 bits (288), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 87/293 (29%), Positives = 140/293 (47%), Gaps = 45/293 (15%)

Query: 222  RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLG----------SRIRMVSSPHPIP-- 269
            R   V+ G  H   +S+ G+++ WG    GQLG G           R+       PI   
Sbjct: 1219 RAIKVSCGWDHVALISESGELFTWGKNQSGQLGHGLDIGKIQTTPKRLEFFRGKSPIIMV 1278

Query: 270  --------CIESSY-----GKDRSAALSRG--SVNSEGPGF--RVPGNYVKGIACGGRHS 312
                    C++S Y     G+D+   L  G  SV+   P     + G  ++ IA G  H+
Sbjct: 1279 ECGGEHSICVDSDYVVYSWGQDKFGQLGHGTKSVSQNRPKIIEDISGQKIQAIAAGFAHT 1338

Query: 313  AVITDAGALLTFGWGLYGQCGQGSTDDELSPNCV--SSLLGIQ-----IEGVAAGLWHTI 365
             V+  +G L +FG+G  GQ G GS   +  P  +  ++++GIQ     I  +A G  H++
Sbjct: 1339 IVLKKSGELYSFGYGDQGQLGHGSFVSKSIPTRIELNTIVGIQHGGGKITQIACGFGHSV 1398

Query: 366  CISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDG 425
              S +G+VY++G  + GQLG G  ++   PRL++A  L+ V    +SCG  +T    D  
Sbjct: 1399 ICSDNGEVYSWGLGKQGQLGHGNYESIARPRLIEA--LKGV--TKISCGHFYTMATTDLK 1454

Query: 426  KVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVA---CGWWHTLLLAVP 475
             V+ WG  ++ +LG G   D+N  +   ++  + +NV+   CG  HT+ L  P
Sbjct: 1455 NVYSWGLGEHMKLGHGS--DKNEATPRVVDFFIQKNVSKIVCGLNHTITLTYP 1505



 Score =  111 bits (277), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 93/345 (26%), Positives = 154/345 (44%), Gaps = 52/345 (15%)

Query: 89   PEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTG----TGLD 144
            P P PL  E   +K + GW H   ++E GE++TWG  +   SG++   L  G    T   
Sbjct: 1210 PMP-PLKNEKRAIKVSCGWDHVALISESGELFTWGKNQ---SGQLGHGLDIGKIQTTPKR 1265

Query: 145  KDVFERQSSFLTEQVSPRSQVSRSSGGT--SSGTDGRGSGEEGSKRRRISLAKQTAESSS 202
             + F  +S  +  +      +   S     S G D  G    G+K          +++  
Sbjct: 1266 LEFFRGKSPIIMVECGGEHSICVDSDYVVYSWGQDKFGQLGHGTK--------SVSQNRP 1317

Query: 203  SGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMV 262
               E++S          G +I  +AAG  HT+ L   G+++ +GYG +GQLG GS    V
Sbjct: 1318 KIIEDIS----------GQKIQAIAAGFAHTIVLKKSGELYSFGYGDQGQLGHGS---FV 1364

Query: 263  SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL 322
            S   P                +R  +N+   G +  G  +  IACG  HS + +D G + 
Sbjct: 1365 SKSIP----------------TRIELNTI-VGIQHGGGKITQIACGFGHSVICSDNGEVY 1407

Query: 323  TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFG 382
            ++G G  GQ G G+ +    P  + +L G+    ++ G ++T+  +   +VY++G  +  
Sbjct: 1408 SWGLGKQGQLGHGNYESIARPRLIEALKGVT--KISCGHFYTMATTDLKNVYSWGLGEHM 1465

Query: 383  QLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKV 427
            +LG G D+ E  PR++D    +NV    + CG  HT  +   G +
Sbjct: 1466 KLGHGSDKNEATPRVVDFFIQKNV--SKIVCGLNHTITLTYPGDL 1508



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 107/472 (22%), Positives = 179/472 (37%), Gaps = 122/472 (25%)

Query: 54   CGF--AMAISDSRKLITWG--STDDLGQSYVTSGKHGEIPEPFPL-PTEASIVKAAAGWA 108
            CG+     IS+S +L TWG   +  LG   +  GK    P+       ++ I+    G  
Sbjct: 1225 CGWDHVALISESGELFTWGKNQSGQLGHG-LDIGKIQTTPKRLEFFRGKSPIIMVECGGE 1283

Query: 109  HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRS 168
            H + V     VY+WG  +       FG L  GT   K V + +   + E +S + ++   
Sbjct: 1284 HSICVDSDYVVYSWGQDK-------FGQLGHGT---KSVSQNRPKII-EDISGQ-KIQAI 1331

Query: 169  SGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP-------GV 221
            + G +     + SGE        S           G     + P  + LN        G 
Sbjct: 1332 AAGFAHTIVLKKSGE------LYSFGYGDQGQLGHGSFVSKSIPTRIELNTIVGIQHGGG 1385

Query: 222  RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
            +I  +A G  H++  SD G+V+ WG G +GQLG G+    ++ P  I  ++         
Sbjct: 1386 KITQIACGFGHSVICSDNGEVYSWGLGKQGQLGHGN-YESIARPRLIEALKG-------- 1436

Query: 282  ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL 341
                                V  I+CG  ++   TD   + ++G G + + G GS  +E 
Sbjct: 1437 --------------------VTKISCGHFYTMATTDLKNVYSWGLGEHMKLGHGSDKNEA 1476

Query: 342  SPNCVSSLLGIQIEGVAAGLWHTICISSDGD----------------------------- 372
            +P  V   +   +  +  GL HTI ++  GD                             
Sbjct: 1477 TPRVVDFFIQKNVSKIVCGLNHTITLTYPGDLNNNSLSNDDDVNDFIDLAPSTSNSSSSS 1536

Query: 373  ------------------------VYAFGGNQFGQLGTGGDQAETLPRLLDAP---SLEN 405
                                    +YA G  + G+LG GGD         D P   +++ 
Sbjct: 1537 SLTNDNNNGRSGRLGLNENSQVSPIYACGAGEHGKLGLGGDLKSP---FFDKPIPTAIKG 1593

Query: 406  VHSKS---VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI 454
            V++ +   +SCG   TA+I  +G ++ WG+  +GQ+G G   D  +P ++ +
Sbjct: 1594 VNALNLIDISCGTDFTAMITSNGALYVWGYGNFGQIGNGKTDDAWVPIRIPL 1645



 Score = 43.1 bits (100), Expect = 0.32,   Method: Composition-based stats.
 Identities = 20/42 (47%), Positives = 28/42 (66%), Gaps = 1/42 (2%)

Query: 401  PSLEN-VHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
            P L+N   +  VSCG  H A+I++ G++F WG N+ GQLG G
Sbjct: 1212 PPLKNEKRAIKVSCGWDHVALISESGELFTWGKNQSGQLGHG 1253


>gi|395741726|ref|XP_003777632.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Pongo
           abelii]
          Length = 1049

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 113/249 (45%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +           
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQ------- 138

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDEL 341
                              +  +ACG  HS  ++ A  +  +G   YGQ G G+    + 
Sbjct: 139 -------------------IVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQT 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  + SLLGI    VAAG  H+  ++  G ++ +G N+FGQLG   +    +P LL   
Sbjct: 180 SPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK-- 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL +     + CG  HTA +  +G VF +G   YGQLG         P +V  + G +  
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297

Query: 461 NVACGWWHT 469
            +ACG  HT
Sbjct: 298 QIACGRQHT 306



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 75/235 (31%), Positives = 109/235 (46%), Gaps = 33/235 (14%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++I  VA G  H+LALS   +V+ WG    GQLGLG+  +  +SP     ++S  G    
Sbjct: 137 IQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQ---LLKSLLG---- 189

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTD 338
                           +P      +A GG HS V+T +GA+  FGWG   +GQ G    +
Sbjct: 190 ----------------IP---FMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDEN 228

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D   PN + SL   +I  +  G  HT  ++ +G V+ FG   +GQLG      E  PR  
Sbjct: 229 DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR-- 286

Query: 399 DAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
               L       ++CG +HT A +   G+++ +G    GQLG G   +R  P  V
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLG-TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPR--NIKSLSDIQIVQVACGYCHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VFCWG NKYGQLGLG    +    Q+  ++ G     VA G  H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 81/160 (50%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      +  ++  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 439 GL-----GDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG+ H+L L+
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIV---QVACGYCHSLALS 153



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 124/304 (40%), Gaps = 48/304 (15%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D     V S +   +P      ++  IV+ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++  EV+ WG  +       +G L  GT    D  ++ S  L + +     
Sbjct: 144 CGYCHSLALSKASEVFCWGQNK-------YGQLGLGT----DCKKQTSPQLLKSLLGIPF 192

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           +  ++GG  S          G  R +              DEN    P L+      +I 
Sbjct: 193 MQVAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRSQKIV 245

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +                
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 288

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                     F + G+ V  IACG +H SA +  +G + +FG G  GQ G GST +  SP
Sbjct: 289 ----------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 344 NCVS 347
             V 
Sbjct: 339 FTVK 342


>gi|328793081|ref|XP_395007.4| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Apis mellifera]
          Length = 4643

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 126/251 (50%), Gaps = 32/251 (12%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GG+H LALS  G V+ WG G +G+LG G+R+              SY  DR 
Sbjct: 3871 VKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRL--------------SY--DRP 3914

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
              +             + G  +  IACGG HSA IT AG L T+G G YG+ G G ++D+
Sbjct: 3915 KLIE-----------ELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQ 3963

Query: 341  LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L+P  + +L   ++  VA  +G   T+C++ D +V+++G   +G+LG GG     +P  +
Sbjct: 3964 LTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKIP--M 4021

Query: 399  DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGC 457
               SL  +    V CG++ +  +   G ++ WG   Y +LG G       P +V  ++G 
Sbjct: 4022 KIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVRRPRKVAALQGK 4081

Query: 458  VPRNVACGWWH 468
               ++A G  H
Sbjct: 4082 KIISIATGSLH 4092



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 88/303 (29%), Positives = 130/303 (42%), Gaps = 80/303 (26%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            ++   V +GG+H LAL+  G+V+ WG G +G+LG G+ I +   P  I  ++S   +D  
Sbjct: 2877 IKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNSISL-DKPRLIESLKSKRIRD-- 2933

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                    IACG  HSA IT +G L T+G G YG+ G G T  +
Sbjct: 2934 ------------------------IACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQ 2969

Query: 341  LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
              P  V SL+G ++  +A G     T+ +++DG VY++G   FG+LG GG      P L+
Sbjct: 2970 SKPKLVQSLVGQRVIQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRGGSDGCYTPLLI 3029

Query: 399  D----------------------------------------------APSL-ENVHSKS- 410
            D                                               P+L E +  K  
Sbjct: 3030 DRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKI 3089

Query: 411  --VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWW 467
              V+ GA H   + D G+V+ WG N +GQ G G  I    PS V  ++      V+CG  
Sbjct: 3090 IHVAVGALHCLAVTDIGQVYAWGDNDHGQQGNGTTIVNKKPSLVHELDDARVNRVSCGSS 3149

Query: 468  HTL 470
            H++
Sbjct: 3150 HSI 3152



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 97/338 (28%), Positives = 138/338 (40%), Gaps = 60/338 (17%)

Query: 89   PEPFPLPTEASIVKAA--AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKD 146
            P+P P  ++  I K A  +G  H +A+T+ G+V++WG  E        G L  G  +  D
Sbjct: 2866 PKPIPFLSQYVIKKVAVHSGGKHALALTQDGKVFSWGEGE-------DGKLGHGNSISLD 2918

Query: 147  VFERQSSFLTEQVSPRSQVS-RSSGGTSSGTDGR-GSGEEGSKRRRISLAKQTAESSSSG 204
                  S  ++++   +  S  S+  TSSG     G GE G                  G
Sbjct: 2919 KPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGR--------------LGHG 2964

Query: 205  DENLSAFPCLVTLNPGVRIATVAAGGR--HTLALSDIGQVWGWGYGGEGQLGLGSRIRMV 262
            D    + P LV    G R+  +A G R   T+AL+  G V+ WG G  G+LG G      
Sbjct: 2965 DTATQSKPKLVQSLVGQRVIQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRG------ 3018

Query: 263  SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITDAGA 320
                                   GS     P    R+ G  V  I CG + S  +T  G 
Sbjct: 3019 -----------------------GSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGE 3055

Query: 321  LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
            + T+G G Y + G G+      P  V  L G +I  VA G  H + ++  G VYA+G N 
Sbjct: 3056 VWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTDIGQVYAWGDND 3115

Query: 381  FGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
             GQ G G       P L+    L++     VSCG+ H+
Sbjct: 3116 HGQQGNGTTIVNKKPSLVH--ELDDARVNRVSCGSSHS 3151



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 96/326 (29%), Positives = 135/326 (41%), Gaps = 62/326 (19%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFL-TEQV 159
            V   +G  HC+A++  G VY+WG  +        G L  G  L  D  +     L TE V
Sbjct: 3874 VAVNSGGKHCLALSSEGHVYSWGEGD-------DGKLGHGNRLSYDRPKLIEELLGTEIV 3926

Query: 160  SPRSQVSRSSGGTSSG---TDGRGS-GEEGSKRRRISLAKQTAESSSSGDENLSAFPCLV 215
                    S+  TS+G   T G+G  G  G                  GD      P L+
Sbjct: 3927 DIACGGHHSAAITSAGWLYTWGKGRYGRLGH-----------------GDSEDQLTPKLI 3969

Query: 216  TLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPC-IE 272
                  ++  VA  +G   TL ++D   VW WG G  G+LG G      S    IP  IE
Sbjct: 3970 EALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGG-----SDGCKIPMKIE 4024

Query: 273  SSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQC 332
            S                       + G  V  + CG + S  +T +GA+ T+G G Y + 
Sbjct: 4025 S-----------------------LAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRL 4061

Query: 333  GQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAE 392
            G G+ D    P  V++L G +I  +A G  H +  +  G+V+ +G N  GQLG G   A 
Sbjct: 4062 GHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSAL 4121

Query: 393  TLPRLLDAPSLENVHSKSVSCGARHT 418
              PRL+ A  L+      V+CG+ HT
Sbjct: 4122 QRPRLVHA--LQGKKITRVACGSAHT 4145



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 29/218 (13%)

Query: 226  VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
            +A G +    +S  G+++  G G  G+LGLG     V  P PIP + S Y   + A  S 
Sbjct: 2828 IAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSN-VCEPKPIPFL-SQYVIKKVAVHS- 2884

Query: 286  GSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNC 345
                                  GG+H+  +T  G + ++G G  G+ G G++     P  
Sbjct: 2885 ----------------------GGKHALALTQDGKVFSWGEGEDGKLGHGNSISLDKPRL 2922

Query: 346  VSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLEN 405
            + SL   +I  +A G  H+  I+S G++Y +G  ++G+LG G    ++ P+L+   SL  
Sbjct: 2923 IESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQSKPKLVQ--SLVG 2980

Query: 406  VHSKSVSCGAR--HTAVIADDGKVFCWGWNKYGQLGLG 441
                 ++CG+R   T  +  DG V+ WG   +G+LG G
Sbjct: 2981 QRVIQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRG 3018



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 119/258 (46%), Gaps = 30/258 (11%)

Query: 211  FPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPC 270
             P L      +R   +  G +   A++  G+V+  GYG  G+LG+G     V  P  +  
Sbjct: 3807 LPVLCESLSALRPVQLTGGEQTLFAVTADGKVYATGYGAVGRLGIGG-TDSVMVPTLLES 3865

Query: 271  IESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
            I+  + K       + +VNS                 GG+H   ++  G + ++G G  G
Sbjct: 3866 IQHVFVK-------KVAVNS-----------------GGKHCLALSSEGHVYSWGEGDDG 3901

Query: 331  QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            + G G+      P  +  LLG +I  +A G  H+  I+S G +Y +G  ++G+LG G  +
Sbjct: 3902 KLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSE 3961

Query: 391  AETLPRLLDAPSLENVHSKSVSCGA--RHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNI 448
             +  P+L++A  L++     V+CG+    T  + DD  V+ WG   YG+LG G      I
Sbjct: 3962 DQLTPKLIEA--LQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKI 4019

Query: 449  PSQV-TIEGCVPRNVACG 465
            P ++ ++ G     V CG
Sbjct: 4020 PMKIESLAGLGVIKVECG 4037



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 61/238 (25%), Positives = 107/238 (44%), Gaps = 33/238 (13%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P L+       I  +A G  ++ ALS  G+++ WG G  G+LG G+  + V  P  +  +
Sbjct: 545 PKLIEALVEKNITFIACGSTYSAALSSNGELYTWGRGNYGKLGHGNSDKDVMIPTLVTAL 604

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGG---RHSAVITDAGALLTFGWGL 328
                                      G+ V  +ACGG     +  +T +G + ++G G 
Sbjct: 605 N--------------------------GHMVVYVACGGGRDPQTLCVTASGIVFSWGDGN 638

Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGG 388
           +G+ G+G  D   +P  V  LL I +  V  G   +  +++ G+VY +G  +  +LG G 
Sbjct: 639 HGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGQQFSAALTAYGEVYTWGKGEDYKLGHGN 698

Query: 389 DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL--GLGDVI 444
           +     P+++D   L+    K +  G  H   + +D  V+ WG N +GQ+   LG ++
Sbjct: 699 EDHVRYPKIIDI--LKTKKIKDLYIGHLHVLALTEDQLVYGWGRNDHGQIDPALGTIV 754



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/232 (27%), Positives = 108/232 (46%), Gaps = 38/232 (16%)

Query: 240  GQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRV 297
            G ++GWG+   GQLG   G+++++     P+ C   S    R   L+             
Sbjct: 3784 GAIYGWGHNHRGQLGGLEGAKVKL-----PVLC--ESLSALRPVQLT------------- 3823

Query: 298  PGNYVKGIACGGRHSAV-ITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG 356
                      GG  +   +T  G +   G+G  G+ G G TD  + P  + S+  + ++ 
Sbjct: 3824 ----------GGEQTLFAVTADGKVYATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKK 3873

Query: 357  VA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
            VA  +G  H + +SS+G VY++G    G+LG G   +   P+L++   L       ++CG
Sbjct: 3874 VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLIE--ELLGTEIVDIACG 3931

Query: 415  ARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
              H+A I   G ++ WG  +YG+LG GD  D+  P  +  ++     +VACG
Sbjct: 3932 GHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLIEALQDYKVIDVACG 3983



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 51/164 (31%), Positives = 87/164 (53%), Gaps = 5/164 (3%)

Query: 305  IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA--AGLW 362
            IA G +   V++  G L   G G  G+ G G   +   P  +  L    I+ VA  +G  
Sbjct: 2828 IAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVAVHSGGK 2887

Query: 363  HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIA 422
            H + ++ DG V+++G  + G+LG G   +   PRL++  SL++   + ++CG+ H+A I 
Sbjct: 2888 HALALTQDGKVFSWGEGEDGKLGHGNSISLDKPRLIE--SLKSKRIRDIACGSGHSAAIT 2945

Query: 423  DDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
              G+++ WG  +YG+LG GD   ++ P  V ++ G     +ACG
Sbjct: 2946 SSGELYTWGLGEYGRLGHGDTATQSKPKLVQSLVGQRVIQIACG 2989



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 66/125 (52%), Gaps = 4/125 (3%)

Query: 346  VSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLEN 405
            +S+L  +Q+ G    L+    +++DG VYA G    G+LG GG  +  +P LL++     
Sbjct: 3814 LSALRPVQLTGGEQTLF---AVTADGKVYATGYGAVGRLGIGGTDSVMVPTLLESIQHVF 3870

Query: 406  VHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVAC 464
            V   +V+ G +H   ++ +G V+ WG    G+LG G+ +  + P  +  + G    ++AC
Sbjct: 3871 VKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDIAC 3930

Query: 465  GWWHT 469
            G  H+
Sbjct: 3931 GGHHS 3935



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 4/125 (3%)

Query: 346  VSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLEN 405
            +S L  + I G +  L+    +S +G +YA G    G+LG G D     P+ +   S   
Sbjct: 2820 LSKLKPVHIAGGSKTLF---VVSQEGKLYACGEGTNGRLGLGDDSNVCEPKPIPFLSQYV 2876

Query: 406  VHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVAC 464
            +   +V  G +H   +  DGKVF WG  + G+LG G+ I  + P  + +++    R++AC
Sbjct: 2877 IKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNSISLDKPRLIESLKSKRIRDIAC 2936

Query: 465  GWWHT 469
            G  H+
Sbjct: 2937 GSGHS 2941



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 67/137 (48%), Gaps = 6/137 (4%)

Query: 309 GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICIS 368
           G H   +T   ++ ++G G  G+ G G+      P  + +L+   I  +A G  ++  +S
Sbjct: 511 GTHYLALTQDNSVYSWGNGECGRLGHGNMTWYDEPKLIEALVEKNITFIACGSTYSAALS 570

Query: 369 SDGDVYAFGGNQFGQLGTGG-DQAETLPRLLDAPSLENVHSKSVSCGA---RHTAVIADD 424
           S+G++Y +G   +G+LG G  D+   +P L+ A  L       V+CG      T  +   
Sbjct: 571 SNGELYTWGRGNYGKLGHGNSDKDVMIPTLVTA--LNGHMVVYVACGGGRDPQTLCVTAS 628

Query: 425 GKVFCWGWNKYGQLGLG 441
           G VF WG   +G+LG G
Sbjct: 629 GIVFSWGDGNHGKLGRG 645



 Score = 42.0 bits (97), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 5/73 (6%)

Query: 53   GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
            G  F++A++ S  + TWG  D   LG     +  H   P          I+  A G  HC
Sbjct: 4037 GSQFSVALTRSGAIYTWGKGDYHRLGHG---TDDHVRRPRKVAALQGKKIISIATGSLHC 4093

Query: 111  VAVTEGGEVYTWG 123
            VA T+ GEV+TWG
Sbjct: 4094 VACTDKGEVFTWG 4106


>gi|344275073|ref|XP_003409338.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Loxodonta africana]
          Length = 1049

 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 112/249 (44%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +           
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLADIQ------- 138

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDEL 341
                              +  +ACG  HS  ++ A  +  +G   YGQ G G     + 
Sbjct: 139 -------------------IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQA 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  + SLLGI    VAAG  H+  ++  G ++ +G N+FGQLG   +    +P LL   
Sbjct: 180 SPKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK-- 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL +     + CG  HTA +  +G VF +G   YGQLG         P +V  + G +  
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297

Query: 461 NVACGWWHT 469
            +ACG  HT
Sbjct: 298 QIACGRQHT 306



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 115/248 (46%), Gaps = 36/248 (14%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++I  VA G  H+LALS   +V+ WG    GQLGLG   +  +SP     ++S  G    
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQASPK---LLKSLLG---- 189

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTD 338
                           +P      +A GG HS V+T +GA+  FGWG   +GQ G    +
Sbjct: 190 ----------------IP---FMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDEN 228

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D   PN + SL   +I  +  G  HT  ++ +G V+ FG   +GQLG      E  PR  
Sbjct: 229 DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR-- 286

Query: 399 DAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC 457
               L       ++CG +HT A +   G+++ +G    GQLG G   +R  P   T++G 
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP--FTVKGN 344

Query: 458 -VPRNVAC 464
            +P N  C
Sbjct: 345 WLPYNGQC 352



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/176 (34%), Positives = 92/176 (52%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLGT-GGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPR--NIKSLADIQIVQVACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLG-DVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VFCWG NKYGQLGLG D   +  P  + ++ G     VA G  H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGLDCKKQASPKLLKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      +  ++  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 439 GL-----GDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLLGSEECIRVPRNIKSLADIQIV---QVACGYYHSLALS 153



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 77/304 (25%), Positives = 123/304 (40%), Gaps = 48/304 (15%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D     + S +   +P       +  IV+ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLADIQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++  EV+ WG  +       +G L    GL  D  ++ S  L + +     
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK-------YGQL----GLGLDCKKQASPKLLKSLLGIPF 192

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           +  ++GG  S          G  R +              DEN    P L+      +I 
Sbjct: 193 MQVAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRSQKIV 245

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +                
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 288

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                     F + G+ V  IACG +H SA +  +G + +FG G  GQ G GST +  SP
Sbjct: 289 ----------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 344 NCVS 347
             V 
Sbjct: 339 FTVK 342


>gi|344275071|ref|XP_003409337.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Loxodonta africana]
          Length = 1057

 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 112/249 (44%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +           
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLADIQ------- 138

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDEL 341
                              +  +ACG  HS  ++ A  +  +G   YGQ G G     + 
Sbjct: 139 -------------------IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQA 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  + SLLGI    VAAG  H+  ++  G ++ +G N+FGQLG   +    +P LL   
Sbjct: 180 SPKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK-- 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL +     + CG  HTA +  +G VF +G   YGQLG         P +V  + G +  
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297

Query: 461 NVACGWWHT 469
            +ACG  HT
Sbjct: 298 QIACGRQHT 306



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 115/248 (46%), Gaps = 36/248 (14%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++I  VA G  H+LALS   +V+ WG    GQLGLG   +  +SP     ++S  G    
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQASP---KLLKSLLG---- 189

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTD 338
                           +P      +A GG HS V+T +GA+  FGWG   +GQ G    +
Sbjct: 190 ----------------IP---FMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDEN 228

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D   PN + SL   +I  +  G  HT  ++ +G V+ FG   +GQLG      E  PR  
Sbjct: 229 DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR-- 286

Query: 399 DAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC 457
               L       ++CG +HT A +   G+++ +G    GQLG G   +R  P   T++G 
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP--FTVKGN 344

Query: 458 -VPRNVAC 464
            +P N  C
Sbjct: 345 WLPYNGQC 352



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/176 (34%), Positives = 92/176 (52%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLGT-GGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPR--NIKSLADIQIVQVACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLG-DVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VFCWG NKYGQLGLG D   +  P  + ++ G     VA G  H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGLDCKKQASPKLLKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      +  ++  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 439 GL-----GDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLLGSEECIRVPRNIKSLADIQIV---QVACGYYHSLALS 153



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 77/304 (25%), Positives = 123/304 (40%), Gaps = 48/304 (15%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D     + S +   +P       +  IV+ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLADIQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++  EV+ WG  +       +G L    GL  D  ++ S  L + +     
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK-------YGQL----GLGLDCKKQASPKLLKSLLGIPF 192

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           +  ++GG  S          G  R +              DEN    P L+      +I 
Sbjct: 193 MQVAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRSQKIV 245

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +                
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 288

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                     F + G+ V  IACG +H SA +  +G + +FG G  GQ G GST +  SP
Sbjct: 289 ----------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 344 NCVS 347
             V 
Sbjct: 339 FTVK 342


>gi|297686826|ref|XP_002820939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Pongo abelii]
          Length = 1057

 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 113/249 (45%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +           
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQ------- 138

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDEL 341
                              +  +ACG  HS  ++ A  +  +G   YGQ G G+    + 
Sbjct: 139 -------------------IVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQT 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  + SLLGI    VAAG  H+  ++  G ++ +G N+FGQLG   +    +P LL   
Sbjct: 180 SPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK-- 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL +     + CG  HTA +  +G VF +G   YGQLG         P +V  + G +  
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297

Query: 461 NVACGWWHT 469
            +ACG  HT
Sbjct: 298 QIACGRQHT 306



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 75/235 (31%), Positives = 109/235 (46%), Gaps = 33/235 (14%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++I  VA G  H+LALS   +V+ WG    GQLGLG+  +  +SP     ++S  G    
Sbjct: 137 IQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQ---LLKSLLG---- 189

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTD 338
                           +P      +A GG HS V+T +GA+  FGWG   +GQ G    +
Sbjct: 190 ----------------IP---FMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDEN 228

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D   PN + SL   +I  +  G  HT  ++ +G V+ FG   +GQLG      E  PR  
Sbjct: 229 DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR-- 286

Query: 399 DAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
               L       ++CG +HT A +   G+++ +G    GQLG G   +R  P  V
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLG-TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPR--NIKSLSDIQIVQVACGYCHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VFCWG NKYGQLGLG    +    Q+  ++ G     VA G  H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 81/160 (50%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      +  ++  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 439 GL-----GDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG+ H+L L+
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIV---QVACGYCHSLALS 153



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 124/304 (40%), Gaps = 48/304 (15%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D     V S +   +P      ++  IV+ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++  EV+ WG  +       +G L  GT    D  ++ S  L + +     
Sbjct: 144 CGYCHSLALSKASEVFCWGQNK-------YGQLGLGT----DCKKQTSPQLLKSLLGIPF 192

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           +  ++GG  S          G  R +              DEN    P L+      +I 
Sbjct: 193 MQVAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRSQKIV 245

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +                
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 288

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                     F + G+ V  IACG +H SA +  +G + +FG G  GQ G GST +  SP
Sbjct: 289 ----------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 344 NCVS 347
             V 
Sbjct: 339 FTVK 342


>gi|355693002|gb|EHH27605.1| RCC1 domain-containing protein 1 [Macaca mulatta]
          Length = 376

 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 117/246 (47%), Gaps = 45/246 (18%)

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFR--VPGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
           E+  G+      +R  V+   P +R   P    + +  G  H+ ++ +AG + ++G G +
Sbjct: 128 EAQIGRLPLLPCARAPVSPRPPFYRPLAPELRARQLELGAEHALLLDEAGQVFSWGGGRH 187

Query: 330 GQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLG---- 385
           GQ G G+ + EL P  + +L G+ +  VAAG WH++C+S  GD+Y +G N+ GQL     
Sbjct: 188 GQLGHGTLEAELEPRLLEALQGLTMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTR 247

Query: 386 -------------TGGDQ---------------------AETLPRLLDAPSLENVHSKSV 411
                        TG ++                      +  P LLD P   +  +  V
Sbjct: 248 NLAEDGETVAREATGLNEDGSQVKRTGRVEDGAPAPFIAVQPFPALLDLPLGSD--AVKV 305

Query: 412 SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI---EGCVPRNVACGWWH 468
           SCG+RHTAV+   G+++ WGW KYGQLG  D    + P +V     +    + V CG W+
Sbjct: 306 SCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDWPRRVEYFVDKQLQVKAVTCGPWN 365

Query: 469 TLLLAV 474
           T + AV
Sbjct: 366 TYVYAV 371



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 80/173 (46%), Gaps = 15/173 (8%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P L+    G+ +A VAAGG H++ +S+ G ++ WG+   GQL L +R  +      +   
Sbjct: 201 PRLLEALQGLTMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTR-NLAEDGETVARE 259

Query: 272 ESSYGKDRSAALSRGSVNSEGPG-----------FRVP-GNYVKGIACGGRHSAVITDAG 319
            +   +D S     G V    P              +P G+    ++CG RH+AV+T  G
Sbjct: 260 ATGLNEDGSQVKRTGRVEDGAPAPFIAVQPFPALLDLPLGSDAVKVSCGSRHTAVVTRTG 319

Query: 320 ALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG--IQIEGVAAGLWHTICISSD 370
            L T+GWG YGQ G   T     P  V   +   +Q++ V  G W+T   + +
Sbjct: 320 ELYTWGWGKYGQLGHEDTTSLDWPRRVEYFVDKQLQVKAVTCGPWNTYVYAVE 372



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 88/207 (42%), Gaps = 44/207 (21%)

Query: 53  GCGFAMAISDSRKLITWG--STDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
           G   A+ + ++ ++ +WG      LG   + +     + E     T A +  AA GW H 
Sbjct: 166 GAEHALLLDEAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLTMAEV--AAGGW-HS 222

Query: 111 VAVTEGGEVYTWGWKECVPSGRVFGDLSTGT---GLDKDVFERQSSFLTEQVSPRSQVSR 167
           V V+E G++Y WGW E        G L+  T     D +   R+++ L E     SQV R
Sbjct: 223 VCVSETGDIYIWGWNES-------GQLALPTRNLAEDGETVAREATGLNED---GSQVKR 272

Query: 168 SSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVA 227
           +           G  E+G+    I++                 FP L+ L  G     V+
Sbjct: 273 T-----------GRVEDGAPAPFIAV---------------QPFPALLDLPLGSDAVKVS 306

Query: 228 AGGRHTLALSDIGQVWGWGYGGEGQLG 254
            G RHT  ++  G+++ WG+G  GQLG
Sbjct: 307 CGSRHTAVVTRTGELYTWGWGKYGQLG 333


>gi|442318560|ref|YP_007358581.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441486202|gb|AGC42897.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 866

 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 111/387 (28%), Positives = 163/387 (42%), Gaps = 59/387 (15%)

Query: 87  EIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKD 146
            IP      T+A  V+  AG  H +A  + G +Y WG          +G L TG      
Sbjct: 386 SIPVQVAALTQA--VEIDAGGYHTLARRQDGTLYAWG-------DNFYGALGTG------ 430

Query: 147 VFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDE 206
                SS +  QV P S V     G       R            +    T      G  
Sbjct: 431 --NTTSSSVPVQV-PLSGVRWFGAGYYYSVAERKKVNMAQVHTLFAWGHNTNGELGDGTT 487

Query: 207 NLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPH 266
                P  V ++    I   A G  H++AL   G VW WGY   GQLG            
Sbjct: 488 TQRTSPTAVVVS---GIVKTAGGSAHSVALGAGGAVWTWGYNAYGQLG------------ 532

Query: 267 PIPCIESSYGKDRSAALSRGSVNSEGPGFRVPG-NYVKGIACGGRHSAVITDAGALLTFG 325
                              G+        ++PG + V  +A G  H+  ++  G +  +G
Sbjct: 533 ------------------NGTTTQVVTPTQLPGMSGVIDVAAGVNHTVALSADGTVAAWG 574

Query: 326 WGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLG 385
           +  YGQ G G+T ++L+P  V  L G+    ++AG  HT+ + +DG V+A+G N +GQLG
Sbjct: 575 YNAYGQLGNGTTANQLTPQSVPELDGV--TAISAGSTHTVALKADGTVWAWGSNLYGQLG 632

Query: 386 TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVID 445
            G     + P  +  PSLENV   S++ G  HT  +  DG ++ WG+   GQLGLG   +
Sbjct: 633 DGTFTHRSSP--VQVPSLENV--VSIAAGHFHTVAVKGDGTLWVWGYGPQGQLGLGTTTN 688

Query: 446 RNIPSQVTIEGCVPRNVACGWWHTLLL 472
           +++P QV+  G     +A G +HT+ L
Sbjct: 689 QSVPVQVSGLGHAVA-IAAGGYHTVAL 714



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 124/465 (26%), Positives = 189/465 (40%), Gaps = 87/465 (18%)

Query: 8   EKMERVVFMWG-YLPGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRK- 65
            + +  ++ WG    GAL   +   S + V++PL+ G  W      G G+  ++++ +K 
Sbjct: 410 RRQDGTLYAWGDNFYGALGTGNTTSSSVPVQVPLS-GVRWF-----GAGYYYSVAERKKV 463

Query: 66  -------LITWG--STDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEG 116
                  L  WG  +  +LG    T     +   P  +   + IVK A G AH VA+  G
Sbjct: 464 NMAQVHTLFAWGHNTNGELGDGTTT-----QRTSPTAV-VVSGIVKTAGGSAHSVALGAG 517

Query: 117 GEVYTWGWKECVPSGRVFGDLSTGTGLDKDV---FERQSSFLTEQVSPRSQVSRSSGGTS 173
           G V+TWG+         +G L  GT             S  +         V+ S+ GT 
Sbjct: 518 GAVWTWGYN-------AYGQLGNGTTTQVVTPTQLPGMSGVIDVAAGVNHTVALSADGTV 570

Query: 174 SGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHT 233
           +       G+ G+      L  Q+                         +  ++AG  HT
Sbjct: 571 AAWGYNAYGQLGNGTTANQLTPQSVPELDG-------------------VTAISAGSTHT 611

Query: 234 LALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGP 293
           +AL   G VW WG    GQLG G+     SSP  +P +E+                    
Sbjct: 612 VALKADGTVWAWGSNLYGQLGDGTFTHR-SSPVQVPSLEN-------------------- 650

Query: 294 GFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ 353
                   V  IA G  H+  +   G L  +G+G  GQ G G+T ++  P  VS L    
Sbjct: 651 --------VVSIAAGHFHTVAVKGDGTLWVWGYGPQGQLGLGTTTNQSVPVQVSGLG--H 700

Query: 354 IEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSC 413
              +AAG +HT+ + ++G V+ +G N  GQLG         P L+  P L NV   +++ 
Sbjct: 701 AVAIAAGGYHTVALLANGQVWTWGYNSSGQLGDATIIQRYSPVLV--PGLTNV--IALAA 756

Query: 414 GARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCV 458
           G   TAV+  DG V+ +G+N  GQLG G    R+ P+   +   V
Sbjct: 757 GGYTTAVLKRDGTVWAFGYNPNGQLGDGTTTSRSSPTATLMNSVV 801



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 116/249 (46%), Gaps = 27/249 (10%)

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR------------MVSSP----HPI 268
           +V+ G  HTL +   G +W WG    GQLG G R +            +VS+     H +
Sbjct: 149 SVSPGVYHTLEVKSGGSLWAWGNNPSGQLGNGQRTQRNAPTRVRGLNQVVSASAGAEHSV 208

Query: 269 PCIES----SYGKDRSAALSRGSVNSEGPGFRVPG-NYVKGIACGGRHSAVITDAGALLT 323
              E     ++G +    L  G+        +VPG + V  +A  G  +  +   G + T
Sbjct: 209 AVTEDGSVWTWGSNAYGQLGDGTNTLRAVPVQVPGMSDVVAVAAAGSRTVALKADGTVWT 268

Query: 324 FGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQ 383
           +G    G+ G G+T   L P  V +L G+    +AAGLWHT+ +  DG  +++G N +GQ
Sbjct: 269 WGINSSGELGDGTTTHSLLPIQVPNLSGV--TNIAAGLWHTLAVKKDGSAWSWGNNAYGQ 326

Query: 384 LGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDV 443
           LG G     TL RL           +++S G  HT  +  DG  + WG+N  GQLG G  
Sbjct: 327 LGDG----TTLNRLRPVLVAGLTGVRALSGGVVHTVALKWDGTAWGWGYNSAGQLGNGTT 382

Query: 444 IDRNIPSQV 452
            + +IP QV
Sbjct: 383 TNSSIPVQV 391



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 128/272 (47%), Gaps = 33/272 (12%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR-IRMVSSPHPIPCIES------- 273
           ++ + +AG  H++A+++ G VW WG    GQLG G+  +R V  P  +P +         
Sbjct: 196 QVVSASAGAEHSVAVTEDGSVWTWGSNAYGQLGDGTNTLRAV--PVQVPGMSDVVAVAAA 253

Query: 274 --------------SYGKDRSAALSRGSVNSEGPGFRVPG-NYVKGIACGGRHSAVITDA 318
                         ++G + S  L  G+        +VP  + V  IA G  H+  +   
Sbjct: 254 GSRTVALKADGTVWTWGINSSGELGDGTTTHSLLPIQVPNLSGVTNIAAGLWHTLAVKKD 313

Query: 319 GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           G+  ++G   YGQ G G+T + L P  V+ L G++   ++ G+ HT+ +  DG  + +G 
Sbjct: 314 GSAWSWGNNAYGQLGDGTTLNRLRPVLVAGLTGVR--ALSGGVVHTVALKWDGTAWGWGY 371

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQLG G     ++P  + A +     +  +  G  HT     DG ++ WG N YG L
Sbjct: 372 NSAGQLGNGTTTNSSIPVQVAALT----QAVEIDAGGYHTLARRQDGTLYAWGDNFYGAL 427

Query: 439 GLGDVIDRNIPSQVTIEGCVPRNVACGWWHTL 470
           G G+    ++P QV + G   R    G+++++
Sbjct: 428 GTGNTTSSSVPVQVPLSGV--RWFGAGYYYSV 457



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 132/485 (27%), Positives = 187/485 (38%), Gaps = 129/485 (26%)

Query: 100 IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQV 159
           +V A+AG  H VAVTE G V+TWG          +G L  GT   + V   Q   +++ V
Sbjct: 197 VVSASAGAEHSVAVTEDGSVWTWG-------SNAYGQLGDGTNTLRAV-PVQVPGMSDVV 248

Query: 160 SPRSQVSRSSGGTSSGT----DGRGSGEEGSKRRRISL---------------------- 193
           +  +  SR+    + GT        SGE G      SL                      
Sbjct: 249 AVAAAGSRTVALKADGTVWTWGINSSGELGDGTTTHSLLPIQVPNLSGVTNIAAGLWHTL 308

Query: 194 -AKQTAESSSSGDENLSAF----------PCLVTLNPGVRIATVAAGGRHTLALSDIGQV 242
             K+   + S G+                P LV    GVR   ++ G  HT+AL   G  
Sbjct: 309 AVKKDGSAWSWGNNAYGQLGDGTTLNRLRPVLVAGLTGVR--ALSGGVVHTVALKWDGTA 366

Query: 243 WGWGYGGEGQLGLGSRIRMVSSPHPIPCIES---------------------SYGKDRSA 281
           WGWGY   GQLG G+     S P  +  +                       ++G +   
Sbjct: 367 WGWGYNSAGQLGNGTTTNS-SIPVQVAALTQAVEIDAGGYHTLARRQDGTLYAWGDNFYG 425

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAV----ITDAGALLTFGWG--LYGQCGQG 335
           AL  G+  S     +VP + V+    G  +S      +  A     F WG    G+ G G
Sbjct: 426 ALGTGNTTSSSVPVQVPLSGVRWFGAGYYYSVAERKKVNMAQVHTLFAWGHNTNGELGDG 485

Query: 336 STDDELSPNCV--------------SSLLGI----------------------------- 352
           +T    SP  V              S  LG                              
Sbjct: 486 TTTQRTSPTAVVVSGIVKTAGGSAHSVALGAGGAVWTWGYNAYGQLGNGTTTQVVTPTQL 545

Query: 353 -QIEGV---AAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHS 408
             + GV   AAG+ HT+ +S+DG V A+G N +GQLG G    +  P+    P L+ V  
Sbjct: 546 PGMSGVIDVAAGVNHTVALSADGTVAAWGYNAYGQLGNGTTANQLTPQ--SVPELDGV-- 601

Query: 409 KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWW 467
            ++S G+ HT  +  DG V+ WG N YGQLG G    R+ P QV ++E  V  ++A G +
Sbjct: 602 TAISAGSTHTVALKADGTVWAWGSNLYGQLGDGTFTHRSSPVQVPSLENVV--SIAAGHF 659

Query: 468 HTLLL 472
           HT+ +
Sbjct: 660 HTVAV 664



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 86/177 (48%), Gaps = 12/177 (6%)

Query: 300 NYVK---GIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG 356
           N+V+    ++ G  H+  +   G+L  +G    GQ G G      +P  V  L   Q+  
Sbjct: 142 NFVQFCPSVSPGVYHTLEVKSGGSLWAWGNNPSGQLGNGQRTQRNAPTRVRGL--NQVVS 199

Query: 357 VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR 416
            +AG  H++ ++ DG V+ +G N +GQLG G +    +P  +  P + +V   +V+    
Sbjct: 200 ASAGAEHSVAVTEDGSVWTWGSNAYGQLGDGTNTLRAVP--VQVPGMSDV--VAVAAAGS 255

Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLL 472
            T  +  DG V+ WG N  G+LG G      +P QV  + G    N+A G WHTL +
Sbjct: 256 RTVALKADGTVWTWGINSSGELGDGTTTHSLLPIQVPNLSGVT--NIAAGLWHTLAV 310



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 135/340 (39%), Gaps = 68/340 (20%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
           G    +A+S    +  WG  +  GQ  + +G       P  +P    +   +AG  H VA
Sbjct: 557 GVNHTVALSADGTVAAWGY-NAYGQ--LGNGTTANQLTPQSVPELDGVTAISAGSTHTVA 613

Query: 113 VTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGT 172
           +   G V+ WG         ++G L  GT      F  +SS +  QV     V   + G 
Sbjct: 614 LKADGTVWAWG-------SNLYGQLGDGT------FTHRSSPV--QVPSLENVVSIAAGH 658

Query: 173 SSGTDGRGSGEE----GSKRRRISLAKQTAESSSSGDENLSAFPCLVT-LNPGVRIATVA 227
                 +G G         + ++ L   T +S           P  V+ L   V IA   
Sbjct: 659 FHTVAVKGDGTLWVWGYGPQGQLGLGTTTNQS----------VPVQVSGLGHAVAIA--- 705

Query: 228 AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGS 287
           AGG HT+AL   GQVW WGY   GQLG  + I+   SP  +P + +              
Sbjct: 706 AGGYHTVALLANGQVWTWGYNSSGQLGDATIIQRY-SPVLVPGLTN-------------- 750

Query: 288 VNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVS 347
                         V  +A GG  +AV+   G +  FG+   GQ G G+T    SP   +
Sbjct: 751 --------------VIALAAGGYTTAVLKRDGTVWAFGYNPNGQLGDGTTTSRSSP---T 793

Query: 348 SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG 387
           + L   +  +++G+ H + +  D  V A G N  GQLG G
Sbjct: 794 ATLMNSVVDLSSGVNHMMGLRKDAWVRACGYNSAGQLGDG 833


>gi|449444879|ref|XP_004140201.1| PREDICTED: uncharacterized protein LOC101207486 [Cucumis sativus]
 gi|449480975|ref|XP_004156044.1| PREDICTED: uncharacterized LOC101207486 [Cucumis sativus]
          Length = 1104

 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 65/171 (38%), Positives = 98/171 (57%), Gaps = 4/171 (2%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ IACGGRH+A++T  G + T+G    G+ G G   D L P  V +L    IE V+ G 
Sbjct: 310 VQNIACGGRHAALVTKQGEIFTWGEESGGRLGHGVDSDVLQPKLVDALGNTNIELVSCGE 369

Query: 362 WHTICISSDGDVYAFGG--NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
           +HT  ++  GD+Y +G     FG LG G + +  +P+ ++ P LE +H  S++CG  HTA
Sbjct: 370 YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWIPKKINGP-LEGIHVSSIACGPWHTA 428

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
           V+   G++F +G   +G LG GD     +P +V +++G      ACG WHT
Sbjct: 429 VVTSAGQLFTFGDGTFGVLGHGDRGSVTMPREVESLKGLRTVRAACGVWHT 479



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 86/279 (30%), Positives = 123/279 (44%), Gaps = 49/279 (17%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYG--GEGQLGLGSRIRMVSSPHPIP 269
           P LV       I  V+ G  HT A++  G ++ WG G    G LG G+ +      H IP
Sbjct: 351 PKLVDALGNTNIELVSCGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEV-----SHWIP 405

Query: 270 CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
                             +N  GP   + G +V  IACG  H+AV+T AG L TFG G +
Sbjct: 406 ----------------KKIN--GP---LEGIHVSSIACGPWHTAVVTSAGQLFTFGDGTF 444

Query: 330 GQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI------------SSDGDVYAFG 377
           G  G G       P  V SL G++    A G+WHT  +             S G ++ +G
Sbjct: 445 GVLGHGDRGSVTMPREVESLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 504

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQ 437
               G+LG G  + + +P  + A  L + +   VSCG   T  +   G V+  G   YGQ
Sbjct: 505 DGDKGRLGHGDKETKLVPTCVAA--LVDPNFCRVSCGHSMTVALTTSGHVYTMGSPVYGQ 562

Query: 438 LGLGDVIDRNIPSQVTIEGCVPRN----VACGWWHTLLL 472
           LG     D  +P  V +EG + ++    +ACG +H  +L
Sbjct: 563 LG-NPHADGKVP--VRVEGKLSKSFVEEIACGAYHVAVL 598



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/270 (27%), Positives = 122/270 (45%), Gaps = 51/270 (18%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  +A GGRH   ++  G+++ WG    G+LG G     V S    P +  + G      
Sbjct: 310 VQNIACGGRHAALVTKQGEIFTWGEESGGRLGHG-----VDSDVLQPKLVDALG------ 358

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY--GQCGQGSTDDE 340
                              ++ ++CG  H+  +T +G L T+G G Y  G  G G+    
Sbjct: 359 ----------------NTNIELVSCGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSH 402

Query: 341 LSPNCVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLD 399
             P  ++  L GI +  +A G WHT  ++S G ++ FG   FG LG G   + T+PR  +
Sbjct: 403 WIPKKINGPLEGIHVSSIACGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRGSVTMPR--E 460

Query: 400 APSLENVHSKSVSCGARHTAVIAD------------DGKVFCWGWNKYGQLGLGDVIDRN 447
             SL+ + +   +CG  HTA + +             GK+F WG    G+LG GD   + 
Sbjct: 461 VESLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKETKL 520

Query: 448 IPSQVTIEGCVPRN---VACGWWHTLLLAV 474
           +P+   +   V  N   V+CG  H++ +A+
Sbjct: 521 VPT--CVAALVDPNFCRVSCG--HSMTVAL 546



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 118/259 (45%), Gaps = 42/259 (16%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G+ ++++A G  HT  ++  GQ++ +G G  G LG G R   V+ P  +  ++       
Sbjct: 414 GIHVSSIACGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR-GSVTMPREVESLK------- 465

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDA------------GALLTFGWG 327
                         G R     V+  ACG  H+A + +             G L T+G G
Sbjct: 466 --------------GLRT----VRA-ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDG 506

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG 387
             G+ G G  + +L P CV++L+      V+ G   T+ +++ G VY  G   +GQLG  
Sbjct: 507 DKGRLGHGDKETKLVPTCVAALVDPNFCRVSCGHSMTVALTTSGHVYTMGSPVYGQLGNP 566

Query: 388 GDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
               +   R+     L     + ++CGA H AV+    +V+ WG    G+LG GD  DRN
Sbjct: 567 HADGKVPVRV--EGKLSKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRN 624

Query: 448 IPSQV-TIEGCVPRNVACG 465
            P+ V  ++    +++ACG
Sbjct: 625 SPTLVEALKDKQVKSIACG 643



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 73/138 (52%), Gaps = 6/138 (4%)

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D L P  + S + + ++ +A G  H   ++  G+++ +G    G+LG G D     P+L+
Sbjct: 295 DSLLPKALESAVVLDVQNIACGGRHAALVTKQGEIFTWGEESGGRLGHGVDSDVLQPKLV 354

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKY--GQLGLGDVIDRNIPSQVT--I 454
           DA  L N + + VSCG  HT  +   G ++ WG   Y  G LG G+ +   IP ++   +
Sbjct: 355 DA--LGNTNIELVSCGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWIPKKINGPL 412

Query: 455 EGCVPRNVACGWWHTLLL 472
           EG    ++ACG WHT ++
Sbjct: 413 EGIHVSSIACGPWHTAVV 430



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 69/164 (42%), Gaps = 27/164 (16%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
           GD+     P  V          V+ G   T+AL+  G V+  G    GQLG         
Sbjct: 514 GDKETKLVPTCVAALVDPNFCRVSCGHSMTVALTTSGHVYTMGSPVYGQLG--------- 564

Query: 264 SPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLT 323
           +PH               A  +  V  EG   ++  ++V+ IACG  H AV+T    + T
Sbjct: 565 NPH---------------ADGKVPVRVEG---KLSKSFVEEIACGAYHVAVLTSRTEVYT 606

Query: 324 FGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI 367
           +G G  G+ G G TDD  SP  V +L   Q++ +A G   T  I
Sbjct: 607 WGKGANGRLGHGDTDDRNSPTLVEALKDKQVKSIACGTNFTAAI 650


>gi|156396932|ref|XP_001637646.1| predicted protein [Nematostella vectensis]
 gi|156224760|gb|EDO45583.1| predicted protein [Nematostella vectensis]
          Length = 1345

 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 75/215 (34%), Positives = 114/215 (53%), Gaps = 30/215 (13%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++IAT      H+LAL+D G+V+ WG G  G+LG G+  R    P  I  +         
Sbjct: 573 IQIATSRGSDGHSLALTDSGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALR-------- 623

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                             G  V  +ACG +HSAV+T  G L TFG G YG+ G G++ ++
Sbjct: 624 ------------------GEEVVNMACGFKHSAVVTVDGKLFTFGNGDYGRLGHGNSANK 665

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGD-VYAFGGNQFGQLGTGGDQAETLPRLLD 399
            +P  V++L    I  VA GL HT+ +S+DG+ V+AFG   +G+LG G   A+T P+ +D
Sbjct: 666 KTPERVTALEKHAIGQVACGLNHTLVLSADGNTVWAFGDGDYGKLGLGSCTAKTSPQAID 725

Query: 400 APSLENVHSKSVSCGARHTAVIADDGKVFCWGWNK 434
              L  +  K + CG + + V+ +DG+VF +G  +
Sbjct: 726 V--LAGIGCKKICCGTQFSVVLTNDGRVFSFGQER 758



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 52/166 (31%), Positives = 89/166 (53%), Gaps = 8/166 (4%)

Query: 311 HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
           HS  +TD+G + ++G G YG+ G G++D +  P  + +L G ++  +A G  H+  ++ D
Sbjct: 584 HSLALTDSGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALRGEEVVNMACGFKHSAVVTVD 643

Query: 371 GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK-VFC 429
           G ++ FG   +G+LG G    +  P  + A  LE      V+CG  HT V++ DG  V+ 
Sbjct: 644 GKLFTFGNGDYGRLGHGNSANKKTPERVTA--LEKHAIGQVACGLNHTLVLSADGNTVWA 701

Query: 430 WGWNKYGQLGLGDVIDRNIPSQVTIE---GCVPRNVACGWWHTLLL 472
           +G   YG+LGLG    +  P  + +    GC  + + CG   +++L
Sbjct: 702 FGDGDYGKLGLGSCTAKTSPQAIDVLAGIGC--KKICCGTQFSVVL 745



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 101/395 (25%), Positives = 159/395 (40%), Gaps = 79/395 (20%)

Query: 41  TVGSAWRDVCGGGCGFAMAISD--------SRKLITWGSTDDLGQSYVTSGKHGEIPEPF 92
           ++ SA + VCG  C F + ++         S   +  G++DDL      S   G +    
Sbjct: 516 SLASAQQVVCGQNCTFVVQVNGTILACGEGSYGRLGMGNSDDLFTLSPISALQGYVV--- 572

Query: 93  PLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQS 152
                  I  +     H +A+T+ GEV++WG  +       +G L  G   D+    RQ 
Sbjct: 573 -----IQIATSRGSDGHSLALTDSGEVFSWGDGD-------YGKLGHGNS-DRQRRPRQ- 618

Query: 153 SFLTEQVSPRSQVSRSSGGTSSG---TDGR----GSGEEGSKRRRISLAKQTAESSSSGD 205
               E +     V+ + G   S     DG+    G+G+ G      S  K+T E  ++ +
Sbjct: 619 ---IEALRGEEVVNMACGFKHSAVVTVDGKLFTFGNGDYGRLGHGNSANKKTPERVTALE 675

Query: 206 ENLSAFPCLVTLNPGVRIATVAAGGRHTLALS-DIGQVWGWGYGGEGQLGLGSRIRMVSS 264
           ++               I  VA G  HTL LS D   VW +G G  G+LGLGS     +S
Sbjct: 676 KHA--------------IGQVACGLNHTLVLSADGNTVWAFGDGDYGKLGLGS-CTAKTS 720

Query: 265 PHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTF 324
           P  I  +                           G   K I CG + S V+T+ G + +F
Sbjct: 721 PQAIDVL--------------------------AGIGCKKICCGTQFSVVLTNDGRVFSF 754

Query: 325 GWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQL 384
           G        +G       P  + +L    I+ V  G  H + ++S G+V+ +G N  GQL
Sbjct: 755 GQERLTGQPEGRLRGPQKPQQIQALASHFIDDVCVGAEHVLALTSTGEVWGWGNNVDGQL 814

Query: 385 GTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
           G G   A+  P ++  P L+  + + +S G  H+A
Sbjct: 815 GLGHSNAQREPCVI--PDLKGKNIRQISAGRNHSA 847



 Score = 43.5 bits (101), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 15/70 (21%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI----------E 272
           I  V  G  H LAL+  G+VWGWG   +GQLGLG      S+    PC+          +
Sbjct: 784 IDDVCVGAEHVLALTSTGEVWGWGNNVDGQLGLGH-----SNAQREPCVIPDLKGKNIRQ 838

Query: 273 SSYGKDRSAA 282
            S G++ SAA
Sbjct: 839 ISAGRNHSAA 848


>gi|428164001|gb|EKX33045.1| hypothetical protein GUITHDRAFT_148202 [Guillardia theta CCMP2712]
          Length = 371

 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 136/300 (45%), Gaps = 67/300 (22%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI-----RMVSSPHPIPCIES---- 273
           +  V+AG RH  A+   G V+ WG G  GQLGLG+       + +S P P+  +      
Sbjct: 81  VTCVSAGHRHAAAIVGGGDVFVWGRGFSGQLGLGTNKSHFTPQPLSFPMPVKALSCGGSH 140

Query: 274 -----------SYGKDRSAALSRGSVNS----------EGPGFRVPGNYVKGIACGGRHS 312
                      + G+ +   L  GS  S          EG G       VK   CG   S
Sbjct: 141 SLFITEDGRLYATGRGKEGQLGTGSQESVLSPVEVQMPEGSG------RVKAAECGKDFS 194

Query: 313 AVITDAGALLTFGWGLYGQCGQGS-TDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDG 371
            + T++G + TFG   YGQ G G      ++P  V+ L G  +  +AAG +H   ++SDG
Sbjct: 195 VIATESGQVFTFGSDDYGQLGLGQFARYAMTPKEVAVLAGKNVRSIAAGDYHAAAVTSDG 254

Query: 372 DVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD-------- 423
            +Y +G  + GQLG G     +LP L+    L+N+  +SV+CG  HT  + D        
Sbjct: 255 KLYTWGYGRSGQLGNGNTVDVSLPVLVR--ELQNLRVQSVACGCDHTVAVIDRGLKEQLM 312

Query: 424 --------DGKVFCWGWNKYGQLGLGDVID-----RNIPSQVTIEGCVPRNVACGWWHTL 470
                    G+VF  G  + GQLG GD+++     R++P QV       + VACG  HTL
Sbjct: 313 LISSQVLESGEVFVMGRGREGQLGRGDIVESPAVYRSVPLQV-------QQVACGTSHTL 365



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 97/341 (28%), Positives = 137/341 (40%), Gaps = 87/341 (25%)

Query: 104 AAGWAHCVAVTEGGEVYTWGWKECVPSGRVF-GDLSTGTGLDKDVFERQSSFLTEQVS-P 161
           +AG  H  A+  GG+V+ WG        R F G L  GT         +S F  + +S P
Sbjct: 85  SAGHRHAAAIVGGGDVFVWG--------RGFSGQLGLGT--------NKSHFTPQPLSFP 128

Query: 162 RSQVSRSSGGTSS---GTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCL 214
               + S GG+ S     DGR    G G+EG       L   + ES  S        P  
Sbjct: 129 MPVKALSCGGSHSLFITEDGRLYATGRGKEGQ------LGTGSQESVLS--------PVE 174

Query: 215 VTLNPGV-RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES 273
           V +  G  R+     G   ++  ++ GQV+ +G    GQLGLG   R   +P  +  +  
Sbjct: 175 VQMPEGSGRVKAAECGKDFSVIATESGQVFTFGSDDYGQLGLGQFARYAMTPKEVAVL-- 232

Query: 274 SYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCG 333
                                    G  V+ IA G  H+A +T  G L T+G+G  GQ G
Sbjct: 233 ------------------------AGKNVRSIAAGDYHAAAVTSDGKLYTWGYGRSGQLG 268

Query: 334 QGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC------------ISSD----GDVYAFG 377
            G+T D   P  V  L  ++++ VA G  HT+             ISS     G+V+  G
Sbjct: 269 NGNTVDVSLPVLVRELQNLRVQSVACGCDHTVAVIDRGLKEQLMLISSQVLESGEVFVMG 328

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
             + GQLG  GD  E+       P    +  + V+CG  HT
Sbjct: 329 RGREGQLGR-GDIVESPAVYRSVP----LQVQQVACGTSHT 364



 Score = 51.6 bits (122), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 96/383 (25%), Positives = 148/383 (38%), Gaps = 97/383 (25%)

Query: 10  MERVVFMWGYLPGALPQRSPILSPLVVRLP-LTVGSAWRDVCGGGCGFAMAISDSRKLIT 68
           +ER+ + WG L   L +   +L P  V L  +T  SA       G   A AI     +  
Sbjct: 53  LERM-YCWGLL--GLGETLDVLYPQKVNLEGVTCVSA-------GHRHAAAIVGGGDVFV 102

Query: 69  WGSTDDLGQSYVTSGKHGEIPEP--FPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGW-K 125
           WG     GQ  + + K    P+P  FP+P +A     + G +H + +TE G +Y  G  K
Sbjct: 103 WGRGFS-GQLGLGTNKSHFTPQPLSFPMPVKA----LSCGGSHSLFITEDGRLYATGRGK 157

Query: 126 ECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSP-RSQVSRSSGGTSSGTDGRGSGEE 184
           E        G L TG+         Q S L    SP   Q+   SG   +   G+     
Sbjct: 158 E--------GQLGTGS---------QESVL----SPVEVQMPEGSGRVKAAECGKDFSVI 196

Query: 185 GSKRRRISLAKQTAESSSSGDENLSAF------PCLVTLNPGVRIATVAAGGRHTLALSD 238
            ++  ++     T  S   G   L  F      P  V +  G  + ++AAG  H  A++ 
Sbjct: 197 ATESGQVF----TFGSDDYGQLGLGQFARYAMTPKEVAVLAGKNVRSIAAGDYHAAAVTS 252

Query: 239 IGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVP 298
            G+++ WGYG  GQLG G+ + +      +P +       R                   
Sbjct: 253 DGKLYTWGYGRSGQLGNGNTVDV-----SLPVLVRELQNLR------------------- 288

Query: 299 GNYVKGIACGGRHSAVITD----------------AGALLTFGWGLYGQCGQGSTDDELS 342
              V+ +ACG  H+  + D                +G +   G G  GQ G+G   D + 
Sbjct: 289 ---VQSVACGCDHTVAVIDRGLKEQLMLISSQVLESGEVFVMGRGREGQLGRG---DIVE 342

Query: 343 PNCVSSLLGIQIEGVAAGLWHTI 365
              V   + +Q++ VA G  HT+
Sbjct: 343 SPAVYRSVPLQVQQVACGTSHTL 365


>gi|403263471|ref|XP_003924055.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Saimiri boliviensis
           boliviensis]
          Length = 1024

 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 74/236 (31%), Positives = 117/236 (49%), Gaps = 27/236 (11%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHP------IPCIESSY 275
           +I  +  G  H+LALS  G+++ WG    GQLG+G +    ++P        IP  + S 
Sbjct: 139 KIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLSGIPLAQISA 198

Query: 276 GKDRSAALSR-GSVNS-----------------EGPGF--RVPGNYVKGIACGGRHSAVI 315
           G+  S ALS  G++ S                 + P     +    V+ +ACGG H+A++
Sbjct: 199 GEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGGSHTALL 258

Query: 316 TDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD-GDVY 374
           T  G L TFG G +GQ G  ST +EL P  V+ L G ++  +A G WHT+   SD G V+
Sbjct: 259 TQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIACGRWHTLAYVSDLGKVF 318

Query: 375 AFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
           +FG  + GQLG GG + + +P  +   S E++  +S +       +  ++  +  W
Sbjct: 319 SFGSGKEGQLGNGGTRDQLIPLPMKVSSNEDLKFESHTSEKELIMIAGENQSILLW 374



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/168 (35%), Positives = 93/168 (55%), Gaps = 4/168 (2%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDELSPNCVSSLLGIQIEGVAAGLWH 363
           I CG  HS  ++  G L  +G  L+GQ G G       +P  V  L GI +  ++AG  H
Sbjct: 143 ITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLSGIPLAQISAGEAH 202

Query: 364 TICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
           ++ +S  G++Y++G N+FGQLG    +++  P L++A  L+N   + ++CG  HTA++  
Sbjct: 203 SMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEA--LDNQKVEFLACGGSHTALLTQ 260

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
           DG +F +G  K+GQLG     +   P  V  + G     +ACG WHTL
Sbjct: 261 DGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIACGRWHTL 308



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 99/250 (39%), Gaps = 50/250 (20%)

Query: 97  EASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLT 156
           E  I++   G  H +A+++GGE++ WG         + G L  G           +  + 
Sbjct: 137 EKKIIQITCGDYHSLALSKGGELFAWG-------QNLHGQLGVGRKFPSTT----TPQIV 185

Query: 157 EQVS--PRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCL 214
           E +S  P +Q+S +    S      G+     K     L     ES  S        P L
Sbjct: 186 EHLSGIPLAQIS-AGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDS--------PSL 236

Query: 215 VTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESS 274
           +      ++  +A GG HT  L+  G ++ +G G  GQLG  S     +     PC+ + 
Sbjct: 237 IEALDNQKVEFLACGGSHTALLTQDGLLFTFGAGKHGQLGHNS-----TQNELRPCLVAE 291

Query: 275 YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHS-AVITDAGALLTFGWGLYGQCG 333
                                 + GN V  IACG  H+ A ++D G + +FG G  GQ G
Sbjct: 292 ----------------------LAGNRVTQIACGRWHTLAYVSDLGKVFSFGSGKEGQLG 329

Query: 334 QGSTDDELSP 343
            G T D+L P
Sbjct: 330 NGGTRDQLIP 339


>gi|332218225|ref|XP_003258259.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Nomascus leucogenys]
          Length = 1049

 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 79/249 (31%), Positives = 113/249 (45%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +           
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDI-------- 137

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDEL 341
                              +  +ACG  HS  ++ A  +  +G   YGQ G G+    + 
Sbjct: 138 ------------------QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQT 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  + SL+GI    VAAG  H+  ++  G ++ +G N+FGQLG   +    +P LL   
Sbjct: 180 SPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK-- 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL +     + CG  HTA +  +G VF +G   YGQLG         P +V  + G +  
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297

Query: 461 NVACGWWHT 469
            +ACG  HT
Sbjct: 298 QIACGRQHT 306



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLGT-GGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VFCWG NKYGQLGLG    +    Q+  ++ G     VA G  H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTL 207



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      +  ++  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 439 GL-----GDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALS 153



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 80/305 (26%), Positives = 123/305 (40%), Gaps = 50/305 (16%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D     + S +   +P      ++  IV+ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS-PRS 163
            G+ H +A+++  EV+ WG  +       +G L  GT   K   +     L   V  P  
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK-------YGQLGLGTDCKK---QTSPQLLKSLVGIPFM 193

Query: 164 QVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRI 223
           QV  ++GG  S          G  R +              DEN    P L+      +I
Sbjct: 194 QV--AAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRSQKI 244

Query: 224 ATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAAL 283
             +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +               
Sbjct: 245 VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV--------------- 288

Query: 284 SRGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                      F + G+ V  IACG +H SA +  +G + +FG G  GQ G GST +  S
Sbjct: 289 -----------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKS 337

Query: 343 PNCVS 347
           P  V 
Sbjct: 338 PFTVK 342


>gi|395820632|ref|XP_003783667.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Otolemur
           garnettii]
          Length = 1049

 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 79/249 (31%), Positives = 112/249 (44%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +           
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQ------- 138

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDEL 341
                              +  +ACG  HS  ++ A  +  +G   YGQ G G     + 
Sbjct: 139 -------------------IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQT 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  + SL+GI    VAAG  H+  ++  G ++ +G N+FGQLG   +    +P LL   
Sbjct: 180 SPQLIKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK-- 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL +     + CG  HTA +  +G VF +G   YGQLG         P +V  + G +  
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297

Query: 461 NVACGWWHT 469
            +ACG  HT
Sbjct: 298 QIACGRQHT 306



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 76/235 (32%), Positives = 108/235 (45%), Gaps = 33/235 (14%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++I  VA G  H+LALS   +V+ WG    GQLGLG   +  +SP     I+S  G    
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQTSPQ---LIKSLVG---- 189

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTD 338
                           +P      +A GG HS V+T +GA+  FGWG   +GQ G    +
Sbjct: 190 ----------------IP---FMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDEN 228

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D   PN + SL   +I  +  G  HT  ++ +G V+ FG   +GQLG      E  PR  
Sbjct: 229 DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR-- 286

Query: 399 DAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
               L       ++CG +HT A +   G+++ +G    GQLG G   +R  P  V
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 60/176 (34%), Positives = 92/176 (52%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLGT-GGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLG-DVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VFCWG NKYGQLGLG D   +  P  + ++ G     VA G  H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGLDCKKQTSPQLIKSLVGIPFMQVAAGGAHSFVLTL 207



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      +  ++  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 439 GL-----GDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALS 153



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 77/304 (25%), Positives = 124/304 (40%), Gaps = 48/304 (15%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D     + S +   +P      ++  IV+ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++  EV+ WG  +       +G L    GL  D  ++ S  L + +     
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK-------YGQL----GLGLDCKKQTSPQLIKSLVGIPF 192

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           +  ++GG  S          G  R +              DEN    P L+      +I 
Sbjct: 193 MQVAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRSQKIV 245

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +                
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 288

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                     F + G+ V  IACG +H SA +  +G + +FG G  GQ G GST +  SP
Sbjct: 289 ----------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338

Query: 344 NCVS 347
             V 
Sbjct: 339 FTVK 342


>gi|224053260|ref|XP_002297742.1| predicted protein [Populus trichocarpa]
 gi|222845000|gb|EEE82547.1| predicted protein [Populus trichocarpa]
          Length = 1063

 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 67/171 (39%), Positives = 97/171 (56%), Gaps = 4/171 (2%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ IACG +H+A++T  G + ++G  L G+ G G   D   P  V  L    +E VA G 
Sbjct: 273 VQAIACGRQHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKFVDGLKNFNVELVACGE 332

Query: 362 WHTICISSDGDVYAFGGN--QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
           + +  ++  GD+Y +GGN   FG LG G +  + +PR L  P LE +H  SVSCG  HTA
Sbjct: 333 YLSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQWVPRKLSGP-LEGIHVSSVSCGPWHTA 391

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
           V+   G++F +G   +G LG GD    + P +V +++G     VACG WHT
Sbjct: 392 VVTSAGQLFTFGDGTFGVLGHGDRSSVSTPREVESLKGLRTMRVACGVWHT 442



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 114/246 (46%), Gaps = 43/246 (17%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G+ +++V+ G  HT  ++  GQ++ +G G  G LG G R   VS+P  +  ++       
Sbjct: 377 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR-SSVSTPREVESLK------- 428

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDA------------GALLTFGWG 327
                         G R        +ACG  H+A + +             G L T+G G
Sbjct: 429 --------------GLRT-----MRVACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDG 469

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG 387
             G+ G G  +  L P  V++L+      VA G   T+ +++ G VY  G   +GQLG  
Sbjct: 470 DKGRLGHGDKEARLVPTYVATLVEPSFCQVACGHSLTVALTTSGQVYTMGSPVYGQLG-- 527

Query: 388 GDQAE-TLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR 446
             QA+  +P  ++   ++N   + ++CGA H AV+    +V+ WG    G+LG GD  DR
Sbjct: 528 NPQADGKVPTRVEGKLMKNF-VEELACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDR 586

Query: 447 NIPSQV 452
           N PS V
Sbjct: 587 NFPSIV 592



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 62/192 (32%), Positives = 94/192 (48%), Gaps = 21/192 (10%)

Query: 297 VPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG 356
           + G +V  ++CG  H+AV+T AG L TFG G +G  G G      +P  V SL G++   
Sbjct: 375 LEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRSSVSTPREVESLKGLRTMR 434

Query: 357 VAAGLWHTICI------------SSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLE 404
           VA G+WHT  +             S G ++ +G    G+LG G  +A  +P  +   +L 
Sbjct: 435 VACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKEARLVPTYV--ATLV 492

Query: 405 NVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRN--- 461
                 V+CG   T  +   G+V+  G   YGQLG     D  +P++V  EG + +N   
Sbjct: 493 EPSFCQVACGHSLTVALTTSGQVYTMGSPVYGQLG-NPQADGKVPTRV--EGKLMKNFVE 549

Query: 462 -VACGWWHTLLL 472
            +ACG +H  +L
Sbjct: 550 ELACGAYHVAVL 561



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 96/230 (41%), Gaps = 41/230 (17%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDI------------GQVWGWGYGGEG 251
           GD +  + P  V    G+R   VA G  HT A+ ++            G+++ WG G +G
Sbjct: 413 GDRSSVSTPREVESLKGLRTMRVACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKG 472

Query: 252 QLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRH 311
           +LG G +   +   +    +E S+ +                           +ACG   
Sbjct: 473 RLGHGDKEARLVPTYVATLVEPSFCQ---------------------------VACGHSL 505

Query: 312 SAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDG 371
           +  +T +G + T G  +YGQ G    D ++       L+   +E +A G +H   ++S  
Sbjct: 506 TVALTTSGQVYTMGSPVYGQLGNPQADGKVPTRVEGKLMKNFVEELACGAYHVAVLTSRT 565

Query: 372 DVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
           +VY +G    G+LG G       P +++A  L++   K + CG   TA I
Sbjct: 566 EVYTWGKGANGRLGHGDTDDRNFPSIVEA--LKDKQVKGIICGTSFTAAI 613



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 73/138 (52%), Gaps = 6/138 (4%)

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D   P  + S + + ++ +A G  H   ++  G+V+++G    G+LG G D   + P+ +
Sbjct: 258 DSFVPKALESAVLLDVQAIACGRQHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKFV 317

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKY--GQLGLGDVIDRNIPSQVT--I 454
           D   L+N + + V+CG   +  +   G ++ WG N Y  G LG G    + +P +++  +
Sbjct: 318 DG--LKNFNVELVACGEYLSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQWVPRKLSGPL 375

Query: 455 EGCVPRNVACGWWHTLLL 472
           EG    +V+CG WHT ++
Sbjct: 376 EGIHVSSVSCGPWHTAVV 393


>gi|332218227|ref|XP_003258260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Nomascus leucogenys]
          Length = 1057

 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 79/249 (31%), Positives = 113/249 (45%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  HTLAL+D GQV+ WG   +GQLGL      +  P  I  +           
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDI-------- 137

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDEL 341
                              +  +ACG  HS  ++ A  +  +G   YGQ G G+    + 
Sbjct: 138 ------------------QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQT 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  + SL+GI    VAAG  H+  ++  G ++ +G N+FGQLG   +    +P LL   
Sbjct: 180 SPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK-- 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL +     + CG  HTA +  +G VF +G   YGQLG         P +V  + G +  
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297

Query: 461 NVACGWWHT 469
            +ACG  HT
Sbjct: 298 QIACGRQHT 306



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLGT-GGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    V+CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VFCWG NKYGQLGLG    +    Q+  ++ G     VA G  H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTL 207



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      +  ++  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 439 GL-----GDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALS 153



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 80/305 (26%), Positives = 123/305 (40%), Gaps = 50/305 (16%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D     + S +   +P      ++  IV+ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS-PRS 163
            G+ H +A+++  EV+ WG  +       +G L  GT   K   +     L   V  P  
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK-------YGQLGLGTDCKK---QTSPQLLKSLVGIPFM 193

Query: 164 QVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRI 223
           QV  ++GG  S          G  R +              DEN    P L+      +I
Sbjct: 194 QV--AAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRSQKI 244

Query: 224 ATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAAL 283
             +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +               
Sbjct: 245 VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV--------------- 288

Query: 284 SRGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                      F + G+ V  IACG +H SA +  +G + +FG G  GQ G GST +  S
Sbjct: 289 -----------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKS 337

Query: 343 PNCVS 347
           P  V 
Sbjct: 338 PFTVK 342


>gi|224105957|ref|XP_002313993.1| predicted protein [Populus trichocarpa]
 gi|222850401|gb|EEE87948.1| predicted protein [Populus trichocarpa]
          Length = 1104

 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 63/171 (36%), Positives = 99/171 (57%), Gaps = 4/171 (2%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ IACGG+H+A++T  G + ++G    G+ G G   D + P  + +L    IE VA G 
Sbjct: 312 VQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVMHPKLIDALSNTNIELVACGE 371

Query: 362 WHTICISSDGDVYAFGGN--QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
           +HT  ++  GD+Y +G     FG LG G + +  +P+ ++ P LE +H  S+SCG  HTA
Sbjct: 372 YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGP-LEGIHVSSISCGPWHTA 430

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
           V+   G++F +G   +G LG GD    ++P +V +++G      ACG WHT
Sbjct: 431 VVTSAGQLFTFGDGTFGVLGHGDRKSISLPKEVESLKGLRTVQAACGVWHT 481



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 83/277 (29%), Positives = 120/277 (43%), Gaps = 45/277 (16%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYG--GEGQLGLGSRIRMVSSPHPIP 269
           P L+       I  VA G  HT A++  G ++ WG G    G LG G+ +      H +P
Sbjct: 353 PKLIDALSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEV-----SHWVP 407

Query: 270 CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
                             VN  GP   + G +V  I+CG  H+AV+T AG L TFG G +
Sbjct: 408 ----------------KRVN--GP---LEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 446

Query: 330 GQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI------------SSDGDVYAFG 377
           G  G G       P  V SL G++    A G+WHT  +             S G ++ +G
Sbjct: 447 GVLGHGDRKSISLPKEVESLKGLRTVQAACGVWHTAAVIEVMVGNSSSSNCSSGKLFTWG 506

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQ 437
               G+LG G  +A+ +P  + A  L   +   V+CG   T      G V+  G   YGQ
Sbjct: 507 DGDKGRLGHGDKEAKLVPTCVAA--LVEPNFCQVACGHSLTVARTTSGHVYTMGSPVYGQ 564

Query: 438 LGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLL 472
           LG   + D  +P++V   +       +ACG +H  +L
Sbjct: 565 LG-NPLADGKLPTRVEGKLSKSFVEEIACGAYHVAVL 600



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 118/259 (45%), Gaps = 42/259 (16%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G+ +++++ G  HT  ++  GQ++ +G G  G LG G R + +S P  +  ++       
Sbjct: 416 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR-KSISLPKEVESLK------- 467

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDA------------GALLTFGWG 327
                         G R         ACG  H+A + +             G L T+G G
Sbjct: 468 --------------GLRTVQ-----AACGVWHTAAVIEVMVGNSSSSNCSSGKLFTWGDG 508

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG 387
             G+ G G  + +L P CV++L+      VA G   T+  ++ G VY  G   +GQLG  
Sbjct: 509 DKGRLGHGDKEAKLVPTCVAALVEPNFCQVACGHSLTVARTTSGHVYTMGSPVYGQLGNP 568

Query: 388 GDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
               + LP  ++   L     + ++CGA H AV+    +V+ WG    G+LG GD  DRN
Sbjct: 569 LADGK-LPTRVEG-KLSKSFVEEIACGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 626

Query: 448 IPSQV-TIEGCVPRNVACG 465
            PS V  ++    +++ACG
Sbjct: 627 SPSLVEALKDKQVKSIACG 645



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 74/138 (53%), Gaps = 6/138 (4%)

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D L P  + S + + ++ +A G  H   ++  G+++++G    G+LG G D     P+L+
Sbjct: 297 DSLFPKALESAVVLDVQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVMHPKLI 356

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKY--GQLGLGDVIDRNIPSQVT--I 454
           DA  L N + + V+CG  HT  +   G ++ WG   Y  G LG G+ +   +P +V   +
Sbjct: 357 DA--LSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 414

Query: 455 EGCVPRNVACGWWHTLLL 472
           EG    +++CG WHT ++
Sbjct: 415 EGIHVSSISCGPWHTAVV 432



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 92/369 (24%), Positives = 144/369 (39%), Gaps = 76/369 (20%)

Query: 48  DVCGGGCG--FAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKA 103
           DV    CG   A  ++   ++ +WG      LG    +   H   P+     +  +I   
Sbjct: 311 DVQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVMH---PKLIDALSNTNIELV 367

Query: 104 AAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLT-EQVSP- 161
           A G  H  AVT  G++YTWG          FG L  G  +   V +R +  L    VS  
Sbjct: 368 ACGEYHTCAVTLSGDLYTWG-----DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI 422

Query: 162 -----RSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVT 216
                 + V  S+G   +  DG         R+ ISL K+         E+L        
Sbjct: 423 SCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSISLPKEV--------ESLK------- 467

Query: 217 LNPGVRIATVAAGGRHTLALSDI------------GQVWGWGYGGEGQLGLGSR------ 258
              G+R    A G  HT A+ ++            G+++ WG G +G+LG G +      
Sbjct: 468 ---GLRTVQAACGVWHTAAVIEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVP 524

Query: 259 ----------IRMVSSPHPIPCIESSYGKDRSAA----------LSRGSVNSEGPGFRVP 298
                        V+  H +    ++ G   +            L+ G + +   G ++ 
Sbjct: 525 TCVAALVEPNFCQVACGHSLTVARTTSGHVYTMGSPVYGQLGNPLADGKLPTRVEG-KLS 583

Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
            ++V+ IACG  H AV+T    + T+G G  G+ G G TDD  SP+ V +L   Q++ +A
Sbjct: 584 KSFVEEIACGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIA 643

Query: 359 AGLWHTICI 367
            G   T  I
Sbjct: 644 CGTSFTAAI 652


>gi|332233500|ref|XP_003265940.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Nomascus leucogenys]
          Length = 1024

 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 127/269 (47%), Gaps = 33/269 (12%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI------PCIESSY 275
           +I  +  G  H+LALS  G+++ WG    GQLG+G +    ++P  +      P  + S 
Sbjct: 139 KIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISA 198

Query: 276 GKDRSAALS---------RGSVNSEGPGFRVPGNY-----------VKGIACGGRHSAVI 315
           G+  S ALS         +      G G     +Y           V+ +ACGG HSA++
Sbjct: 199 GEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEALDNQEVEFLACGGSHSALL 258

Query: 316 TDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD-GDVY 374
           T  G L TFG G +GQ G  ST +EL P  V+ L+G ++  +A G WHT+   SD G V+
Sbjct: 259 TQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYVSDLGKVF 318

Query: 375 AFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNK 434
           +FG  + GQLG GG + + +P  +   S E +  ++ +       +   +  +  W   +
Sbjct: 319 SFGSGKDGQLGNGGTRDQLIPLPVKVSSSEELKLETHTSEKELIMIAGGNQSILLWIKKE 378

Query: 435 YGQLGLGDVIDRNIPSQVTIEGCVPRNVA 463
              + L     R IP+    EG V R +A
Sbjct: 379 NSYVNL----KRTIPT--LNEGTVRRWIA 401



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 59/168 (35%), Positives = 94/168 (55%), Gaps = 4/168 (2%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDELSPNCVSSLLGIQIEGVAAGLWH 363
           I CG  HS  ++  G L  +G  L+GQ G G       +P  V  L G+ +  ++AG  H
Sbjct: 143 ITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAH 202

Query: 364 TICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
           ++ +S  G++Y++G N+FGQLG G  +++  P L++A  L+N   + ++CG  H+A++  
Sbjct: 203 SMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEA--LDNQEVEFLACGGSHSALLTQ 260

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
           DG +F +G  K+GQLG     +   P  V  + G     +ACG WHTL
Sbjct: 261 DGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTL 308



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 68/123 (55%), Gaps = 4/123 (3%)

Query: 353 QIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD-QAETLPRLLDAPSLENVHSKSV 411
           +I  +  G +H++ +S  G+++A+G N  GQLG G    + T P++++   L  V    +
Sbjct: 139 KIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVE--HLAGVPLAQI 196

Query: 412 SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTL 470
           S G  H+  ++  G ++ WG N++GQLGLG    ++ PS +  ++      +ACG  H+ 
Sbjct: 197 SAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEALDNQEVEFLACGGSHSA 256

Query: 471 LLA 473
           LL 
Sbjct: 257 LLT 259



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 67/241 (27%), Positives = 103/241 (42%), Gaps = 59/241 (24%)

Query: 47  RDVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGE--IPEPFPLPTEASIV- 101
           + +    CG   ++A+S   +L  WG              HG+  +   FP  T   IV 
Sbjct: 138 KKIIQITCGDYHSLALSKGGELFAWGQ-----------NLHGQLGVGRKFPSTTTPQIVE 186

Query: 102 --------KAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSS 153
                   + +AG AH +A++  G +Y+WG  E       FG L  G    KD       
Sbjct: 187 HLAGVPLAQISAGEAHSMALSMSGNIYSWGKNE-------FGQLGLGHTESKDY-----P 234

Query: 154 FLTEQVSPRSQVSRSSGGTSSG---TDGR----GSGEEGSKRRRISLAKQTAESSSSGDE 206
            L E +  +     + GG+ S     DG     G+G+ G          Q   +S+  + 
Sbjct: 235 SLIEALDNQEVEFLACGGSHSALLTQDGLLFTFGAGKHG----------QLGHNSTQNEL 284

Query: 207 NLSAFPCLVTLNPGVRIATVAAGGRHTLA-LSDIGQVWGWGYGGEGQLGL-GSRIRMVSS 264
                PCLV    G R+  +A G  HTLA +SD+G+V+ +G G +GQLG  G+R +++  
Sbjct: 285 R----PCLVAELVGNRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLIPL 340

Query: 265 P 265
           P
Sbjct: 341 P 341



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 97/250 (38%), Gaps = 50/250 (20%)

Query: 97  EASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLT 156
           E  I++   G  H +A+++GGE++ WG         + G L  G           +  + 
Sbjct: 137 EKKIIQITCGDYHSLALSKGGELFAWG-------QNLHGQLGVGRKFPSTT----TPQIV 185

Query: 157 EQVS--PRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCL 214
           E ++  P +Q+S    G +       SG         S  K        G      +P L
Sbjct: 186 EHLAGVPLAQIS---AGEAHSMALSMSG------NIYSWGKNEFGQLGLGHTESKDYPSL 236

Query: 215 VTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESS 274
           +       +  +A GG H+  L+  G ++ +G G  GQLG  S     +     PC+ + 
Sbjct: 237 IEALDNQEVEFLACGGSHSALLTQDGLLFTFGAGKHGQLGHNS-----TQNELRPCLVAE 291

Query: 275 YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHS-AVITDAGALLTFGWGLYGQCG 333
                                 + GN V  IACG  H+ A ++D G + +FG G  GQ G
Sbjct: 292 ----------------------LVGNRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLG 329

Query: 334 QGSTDDELSP 343
            G T D+L P
Sbjct: 330 NGGTRDQLIP 339


>gi|345494372|ref|XP_001602409.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Nasonia
           vitripennis]
          Length = 1083

 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 79/249 (31%), Positives = 119/249 (47%), Gaps = 30/249 (12%)

Query: 227 AAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRG 286
           A G  H++A+++ GQ++ WG   +GQLGLG+ + +  +P  +  + +S            
Sbjct: 117 ACGASHSVAVNNWGQLFCWGSNADGQLGLGTPLTIAHTPRMVKALGTSI----------- 165

Query: 287 SVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGS-TDDELSPNC 345
                          V  IACG +H+  +T+ G L  +G    GQ G G     E  P  
Sbjct: 166 ---------------VVQIACGKKHTLALTNNGELYAWGSNSDGQLGLGQDVKIETRPKL 210

Query: 346 VSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLEN 405
           ++ L  I I  +A G +H+I +S  G V+ +G N FGQLG      + +P LL   +L N
Sbjct: 211 ITGLATIPIAFIACGGYHSIVVSKSGAVFGWGRNTFGQLGMNDISDKYVPCLLK--TLRN 268

Query: 406 VHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVAC 464
              K V+CG   +  +  DG VF  G   YGQLG G   +  +P Q+  + G V   ++C
Sbjct: 269 AKVKYVACGEEFSVFLTMDGGVFTCGAGMYGQLGHGANSNEILPRQIIELMGSVVTQISC 328

Query: 465 GWWHTLLLA 473
           G  HTL L 
Sbjct: 329 GKRHTLALV 337



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 78/276 (28%), Positives = 127/276 (46%), Gaps = 41/276 (14%)

Query: 205 DENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGL---GSRIRM 261
           DEN+   P  +       +  +A G  HT+ ++  G+V+  G    GQLG      R++M
Sbjct: 46  DENI-LMPRELDFQKATAVEQIACGETHTVLITKDGEVFSCGNNDSGQLGHEKPTKRLQM 104

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
           +                              PG  +     K  ACG  HS  + + G L
Sbjct: 105 I------------------------------PG--LDAFIFKQAACGASHSVAVNNWGQL 132

Query: 322 LTFGWGLYGQCGQGS-TDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
             +G    GQ G G+      +P  V +L    +  +A G  HT+ ++++G++YA+G N 
Sbjct: 133 FCWGSNADGQLGLGTPLTIAHTPRMVKALGTSIVVQIACGKKHTLALTNNGELYAWGSNS 192

Query: 381 FGQLGTGGD-QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG 439
            GQLG G D + ET P+L+    L  +    ++CG  H+ V++  G VF WG N +GQLG
Sbjct: 193 DGQLGLGQDVKIETRPKLITG--LATIPIAFIACGGYHSIVVSKSGAVFGWGRNTFGQLG 250

Query: 440 LGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLAV 474
           + D+ D+ +P  + T+     + VACG   ++ L +
Sbjct: 251 MNDISDKYVPCLLKTLRNAKVKYVACGEEFSVFLTM 286



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 56/164 (34%), Positives = 83/164 (50%), Gaps = 8/164 (4%)

Query: 314 VITDAGALLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDG 371
           +I +   +  +G  +YG+ G G  +DE  L P  +       +E +A G  HT+ I+ DG
Sbjct: 21  LIPNDNNMYCWGSTVYGELGLGGIEDENILMPRELDFQKATAVEQIACGETHTVLITKDG 80

Query: 372 DVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWG 431
           +V++ G N  GQLG      +   RL   P L+    K  +CGA H+  + + G++FCWG
Sbjct: 81  EVFSCGNNDSGQLG----HEKPTKRLQMIPGLDAFIFKQAACGASHSVAVNNWGQLFCWG 136

Query: 432 WNKYGQLGLGDVID-RNIPSQVTIEGC-VPRNVACGWWHTLLLA 473
            N  GQLGLG  +   + P  V   G  +   +ACG  HTL L 
Sbjct: 137 SNADGQLGLGTPLTIAHTPRMVKALGTSIVVQIACGKKHTLALT 180



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 97/382 (25%), Positives = 152/382 (39%), Gaps = 85/382 (22%)

Query: 42  VGSAWRDVCGGGCGFAM---AISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEA 98
           + SA + +C     F +    I +   +  WGST      Y   G  G   E   +P E 
Sbjct: 1   MASAPKRLCIKADTFHLPLKLIPNDNNMYCWGST-----VYGELGLGGIEDENILMPREL 55

Query: 99  SIVKAAA------GWAHCVAVTEGGEVYTWGWKEC------VPSGRVFGDLSTGTGLDKD 146
              KA A      G  H V +T+ GEV++ G  +        P+ R    L    GLD  
Sbjct: 56  DFQKATAVEQIACGETHTVLITKDGEVFSCGNNDSGQLGHEKPTKR----LQMIPGLDAF 111

Query: 147 VFERQSSFLTEQVSPRS--QVSRSSGGTSSGTDGRGSGEEGSKRRRISLA---------- 194
           +F++ +   +  V+  +  Q+    G  + G  G G+    +   R+  A          
Sbjct: 112 IFKQAACGASHSVAVNNWGQLF-CWGSNADGQLGLGTPLTIAHTPRMVKALGTSIVVQIA 170

Query: 195 ---KQTAESSSSG-----------------DENLSAFPCLVTLNPGVRIATVAAGGRHTL 234
              K T   +++G                 D  +   P L+T    + IA +A GG H++
Sbjct: 171 CGKKHTLALTNNGELYAWGSNSDGQLGLGQDVKIETRPKLITGLATIPIAFIACGGYHSI 230

Query: 235 ALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPG 294
            +S  G V+GWG    GQLG+        S   +PC+  +    R+A             
Sbjct: 231 VVSKSGAVFGWGRNTFGQLGMND-----ISDKYVPCLLKTL---RNAK------------ 270

Query: 295 FRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQI 354
                  VK +ACG   S  +T  G + T G G+YGQ G G+  +E+ P  +  L+G  +
Sbjct: 271 -------VKYVACGEEFSVFLTMDGGVFTCGAGMYGQLGHGANSNEILPRQIIELMGSVV 323

Query: 355 EGVAAGLWHTI-CISSDGDVYA 375
             ++ G  HT+  + S G VYA
Sbjct: 324 TQISCGKRHTLALVPSRGKVYA 345


>gi|296196028|ref|XP_002745648.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Callithrix jacchus]
          Length = 1024

 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 74/236 (31%), Positives = 117/236 (49%), Gaps = 27/236 (11%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHP------IPCIESSY 275
           +I  +  G  H+LALS  G+++ WG    GQLG+G +    ++P        IP  + S 
Sbjct: 139 KIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTAPQIVEHLAGIPLAQISA 198

Query: 276 GKDRSAALSR-GSVNS-----------------EGPGF--RVPGNYVKGIACGGRHSAVI 315
           G+  S ALS  G++ S                 + P     +    V+ +ACGG H+A++
Sbjct: 199 GEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGGSHTALL 258

Query: 316 TDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD-GDVY 374
           T  G L TFG G +GQ G  ST +EL P  V+ L G ++  +A G WHT+   SD G V+
Sbjct: 259 TQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIACGRWHTLAYVSDLGKVF 318

Query: 375 AFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
           +FG  + GQLG GG + + +P  +   S E++  +S +       +  ++  +  W
Sbjct: 319 SFGSGKEGQLGNGGTRDQLIPLPMKVSSNEDLKFESHTSEKELIMIAGENQSILLW 374



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 60/168 (35%), Positives = 93/168 (55%), Gaps = 4/168 (2%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDELSPNCVSSLLGIQIEGVAAGLWH 363
           I CG  HS  ++  G L  +G  L+GQ G G       +P  V  L GI +  ++AG  H
Sbjct: 143 ITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTAPQIVEHLAGIPLAQISAGEAH 202

Query: 364 TICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
           ++ +S  G++Y++G N+FGQLG    +++  P L++A  L+N   + ++CG  HTA++  
Sbjct: 203 SMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEA--LDNQKVEFLACGGSHTALLTQ 260

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
           DG +F +G  K+GQLG     +   P  V  + G     +ACG WHTL
Sbjct: 261 DGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIACGRWHTL 308



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 72/175 (41%), Gaps = 45/175 (25%)

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSD------------------------------- 370
           +P C+     ++I  +  G  H + +SSD                               
Sbjct: 87  TPKCIKLGKNMKIHSMDLGADHMLILSSDGKPFEYDNYSMKHLRFESILQEKKIIQITCG 146

Query: 371 ----------GDVYAFGGNQFGQLGTGGD-QAETLPRLLDAPSLENVHSKSVSCGARHTA 419
                     G+++A+G N  GQLG G    + T P++++   L  +    +S G  H+ 
Sbjct: 147 DYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTAPQIVE--HLAGIPLAQISAGEAHSM 204

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLA 473
            ++  G ++ WG N++GQLGL     ++ PS +  ++      +ACG  HT LL 
Sbjct: 205 ALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGGSHTALLT 259


>gi|332238752|ref|XP_003268565.1| PREDICTED: RCC1 domain-containing protein 1 [Nomascus leucogenys]
          Length = 376

 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 115/249 (46%), Gaps = 45/249 (18%)

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFR--VPGNYVKGIACGGRHSAVITDAGALLTFGW 326
           P  E+  G+      +R  V+   P +R   P    + +  G  H+ ++  AG + ++G 
Sbjct: 125 PGSEAQAGRLPLLPCARAYVSPRAPFYRPLAPELRARQLELGAEHALLLDAAGRVFSWGG 184

Query: 327 GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLG- 385
           G +GQ G G+ + EL P  + +L G+ +  VAAG WH++C+S  GD+Y +G N+ GQL  
Sbjct: 185 GRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLAL 244

Query: 386 ----------------------------TGGDQ---------AETLPRLLDAPSLENVHS 408
                                       TGG +          +  P LLD P      +
Sbjct: 245 PTRNLAEDGETVAREATELNEDGSQVKRTGGAEDGAPAPFIAVQPFPALLDLPL--GSDA 302

Query: 409 KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI---EGCVPRNVACG 465
              SCG+RHTAV+   G+++ WGW KYGQLG  D    + P +V     +    + V CG
Sbjct: 303 VKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPCRVEYFVDKQLQVKTVTCG 362

Query: 466 WWHTLLLAV 474
            W+T + AV
Sbjct: 363 PWNTYVYAV 371



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 78/173 (45%), Gaps = 15/173 (8%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P L+    G+ +A VAAGG H++ +S+ G ++ WG+   GQL L +R  +      +   
Sbjct: 201 PRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTR-NLAEDGETVARE 259

Query: 272 ESSYGKDRSAALSRGSVNSEGPG-----------FRVP-GNYVKGIACGGRHSAVITDAG 319
            +   +D S     G      P              +P G+     +CG RH+AV+T  G
Sbjct: 260 ATELNEDGSQVKRTGGAEDGAPAPFIAVQPFPALLDLPLGSDAVKASCGSRHTAVVTRTG 319

Query: 320 ALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG--IQIEGVAAGLWHTICISSD 370
            L T+GWG YGQ G   T     P  V   +   +Q++ V  G W+T   + +
Sbjct: 320 ELYTWGWGKYGQLGHEDTTSLDRPCRVEYFVDKQLQVKTVTCGPWNTYVYAVE 372



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 88/215 (40%), Gaps = 60/215 (27%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEI--------PEPFPLPTEASIVKA- 103
           G   A+ +  + ++ +WG            G+HG++         EP  L     +V A 
Sbjct: 166 GAEHALLLDAAGRVFSWGG-----------GRHGQLGHGTLEAELEPRLLEALQGLVMAE 214

Query: 104 -AAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGT---GLDKDVFERQSSFLTEQV 159
            AAG  H V V+E G++Y WGW E        G L+  T     D +   R+++ L E  
Sbjct: 215 VAAGGWHSVCVSETGDIYIWGWNES-------GQLALPTRNLAEDGETVAREATELNED- 266

Query: 160 SPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
              SQV R+ G            E+G+    I++                 FP L+ L  
Sbjct: 267 --GSQVKRTGGA-----------EDGAPAPFIAV---------------QPFPALLDLPL 298

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG 254
           G      + G RHT  ++  G+++ WG+G  GQLG
Sbjct: 299 GSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLG 333


>gi|395855000|ref|XP_003799962.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Otolemur
           garnettii]
          Length = 816

 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 103/295 (34%), Positives = 145/295 (49%), Gaps = 39/295 (13%)

Query: 213 CLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR--------IRMVSS 264
           C+  L P  ++   A G  HT+  ++ G V+  G   EGQLGLG          I   +S
Sbjct: 80  CIKALKPE-KVKFAACGRTHTIISTEGGNVYATGGNNEGQLGLGDTDERDTFHLISFFTS 138

Query: 265 PHPIPCIESSYGKDRSAALSRGSV------NSEGP-GFR------VPGNYVKG-----IA 306
            H I  +  S G + SAAL+          NSEG  G +      VP     G     I+
Sbjct: 139 QHKIKQL--SAGSNTSAALTEDGQLFMWGDNSEGQIGLKDVTNVCVPHQVTIGKPISWIS 196

Query: 307 CGGRHSAVITDAGALLTFGWGLYGQCGQGST--DDELSPNCVSSLLGIQIEGVAAGLWHT 364
           CG  HSA +T  G L TFG    G+ G  S    +   P  VSS+    I+ VA G  HT
Sbjct: 197 CGYYHSAFVTIDGELYTFGESESGKLGLPSQLLTNHRIPQLVSSIPDKVIQ-VACGGGHT 255

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAET-LPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
           + ++ +  VYAFG  QFGQLG G    ET  P++L+    E +   S+SCG  HTA+I D
Sbjct: 256 LVLTEES-VYAFGLGQFGQLGLGTFIFETSEPKVLEYVKGEKI--ISISCGENHTAMITD 312

Query: 424 DGKVFCWGWNKYGQLGLG--DVIDRNIPSQVTI-EGCVPRNVACGWWHTLLLAVP 475
            G ++ +G  ++G+LGLG  +  +R  P+  ++    + + VACG  H L+ A P
Sbjct: 313 TGGIYTFGDGRHGKLGLGLENFTNRFFPTPCSVFLKFMVQLVACGGCHMLVFATP 367



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 62/171 (36%), Positives = 95/171 (55%), Gaps = 4/171 (2%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           ++CG  HSA++T    L  FG   +GQ G GS      P C+ +L   +++  A G  HT
Sbjct: 40  LSCGDEHSAIVTGNNKLYMFGSNNWGQLGLGSKAAVNKPTCIKALKPEKVKFAACGRTHT 99

Query: 365 ICISSDGDVYAFGGNQFGQLGTGG-DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
           I  +  G+VYA GGN  GQLG G  D+ +T   +    S   +  K +S G+  +A + +
Sbjct: 100 IISTEGGNVYATGGNNEGQLGLGDTDERDTFHLISFFTSQHKI--KQLSAGSNTSAALTE 157

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAV 474
           DG++F WG N  GQ+GL DV +  +P QVTI G     ++CG++H+  + +
Sbjct: 158 DGQLFMWGDNSEGQIGLKDVTNVCVPHQVTI-GKPISWISCGYYHSAFVTI 207



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 81/311 (26%), Positives = 119/311 (38%), Gaps = 80/311 (25%)

Query: 103 AAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPR 162
           AA G  H +  TEGG VY  G       G   G L  G   ++D F    SF T Q   +
Sbjct: 92  AACGRTHTIISTEGGNVYATG-------GNNEGQLGLGDTDERDTF-HLISFFTSQHKIK 143

Query: 163 SQVSRSSGGTSSGTDGR----GSGEEGS----------KRRRISLAK------------- 195
              + S+   +   DG+    G   EG              ++++ K             
Sbjct: 144 QLSAGSNTSAALTEDGQLFMWGDNSEGQIGLKDVTNVCVPHQVTIGKPISWISCGYYHSA 203

Query: 196 --------QTAESSSSGDENLSA-------FPCLVTLNPGVRIATVAAGGRHTLALSDIG 240
                    T   S SG   L +        P LV+  P  ++  VA GG HTL L++  
Sbjct: 204 FVTIDGELYTFGESESGKLGLPSQLLTNHRIPQLVSSIPD-KVIQVACGGGHTLVLTE-E 261

Query: 241 QVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGN 300
            V+ +G G  GQLGLG+ I   S P  +  ++                          G 
Sbjct: 262 SVYAFGLGQFGQLGLGTFIFETSEPKVLEYVK--------------------------GE 295

Query: 301 YVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD--DELSPNCVSSLLGIQIEGVA 358
            +  I+CG  H+A+ITD G + TFG G +G+ G G  +  +   P   S  L   ++ VA
Sbjct: 296 KIISISCGENHTAMITDTGGIYTFGDGRHGKLGLGLENFTNRFFPTPCSVFLKFMVQLVA 355

Query: 359 AGLWHTICISS 369
            G  H +  ++
Sbjct: 356 CGGCHMLVFAT 366


>gi|326923408|ref|XP_003207928.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Meleagris gallopavo]
          Length = 1056

 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 113/249 (45%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  HTLAL+D GQV+ WG   +GQLGL      +  P  I             +
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNI------------KS 133

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDEL 341
           LS   +                +ACG  HS  ++    + ++G   YGQ G G     + 
Sbjct: 134 LSEIQIVQ--------------VACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQN 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP+ + SLLGI    +AAG  H+  ++  G ++ +G N+FGQLG   D    +P LL   
Sbjct: 180 SPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLK-- 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL       + CG  HTA +  +G VF +G   YGQLG         P +V  + G +  
Sbjct: 238 SLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSLVT 297

Query: 461 NVACGWWHT 469
            + CG  HT
Sbjct: 298 QITCGRQHT 306



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 98/355 (27%), Positives = 145/355 (40%), Gaps = 75/355 (21%)

Query: 47  RDVCGGGCGF--AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           RDV   GCG    + + D   + T G  +DLGQ  +   K  + PE        +IV  +
Sbjct: 37  RDV---GCGLRHTVFVLDDGTVYTCGC-NDLGQ--LGHEKARKRPEHVGALDAQNIVAVS 90

Query: 105 AGWAHCVAVTEGGEVYTWGW-----------KECVPSGRVFGDLSTGTGLDKDVFERQSS 153
            G AH +A+ + G+VY WG            +EC+   R    LS               
Sbjct: 91  CGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEI------------- 137

Query: 154 FLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPC 213
               Q+   +     S   S G++    G+  +K  ++ L  +  + +S         P 
Sbjct: 138 ----QIVQVACGYYHSLALSKGSEVFSWGQ--NKYGQLGLGYEYKKQNS---------PH 182

Query: 214 LVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES 273
           ++    G+  A +AAGG H+  L+  G ++GWG    GQLGL                  
Sbjct: 183 VIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND---------------- 226

Query: 274 SYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCG 333
               DR       S+ ++          V  I CG  H+A +T  G + TFG G YGQ G
Sbjct: 227 --DNDRYVPTLLKSLRTQK---------VVHICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 334 QGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFGGNQFGQLGTG 387
             ST  E++P  V  L+G  +  +  G  HT   + S G +Y+FG    GQLGTG
Sbjct: 276 HNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTG 330



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/160 (36%), Positives = 81/160 (50%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      L  +I  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G ++A   P  + A   +N+   +VSCG  HT  + D G+V+ WG    GQL
Sbjct: 61  NDLGQL--GHEKARKRPEHVGALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLATDGQL 116

Query: 439 GLGDV-----IDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLPGTEECIRVPRNIKSLSEIQIV---QVACGYYHSLALS 153



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 73/306 (23%), Positives = 125/306 (40%), Gaps = 52/306 (16%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D       + +   +P      +E  IV+ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQV--SPR 162
            G+ H +A+++G EV++WG  +       +G L  G    K    + S  + + +   P 
Sbjct: 144 CGYYHSLALSKGSEVFSWGQNK-------YGQLGLGYEYKK----QNSPHVIKSLLGIPF 192

Query: 163 SQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVR 222
           +Q+  ++GG  S          G  R +              D+N    P L+      +
Sbjct: 193 AQI--AAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDDNDRYVPTLLKSLRTQK 243

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +              
Sbjct: 244 VVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV-------------- 288

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDEL 341
                       F + G+ V  I CG +H +A +  +G + +FG G  GQ G G+T +  
Sbjct: 289 ------------FELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRK 336

Query: 342 SPNCVS 347
           SP  V 
Sbjct: 337 SPFTVK 342


>gi|157127963|ref|XP_001661249.1| hect E3 ubiquitin ligase [Aedes aegypti]
 gi|108882309|gb|EAT46534.1| AAEL002306-PA [Aedes aegypti]
          Length = 4837

 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 105/376 (27%), Positives = 170/376 (45%), Gaps = 55/376 (14%)

Query: 104 AAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRS 163
           A  ++  V  ++  +++T GW  C P   ++G +S  T           +  T+ +    
Sbjct: 464 AGNYSTKVNKSKSQKIFTLGWSSCSP--EMYGFMSEAT-----------NGTTQLMGSIP 510

Query: 164 QVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLS--AFPCLVTLNPGV 221
           + S ++    S    R      +    ++   Q     S+  EN++  AF  L     GV
Sbjct: 511 RYSAATIELPSTLQVRQVACTENNIYILTTGGQVFSLHSNSSENIAPKAFEGL----EGV 566

Query: 222 RIATVAAG--GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
            +  +AA   G+H + LS   +VW WG G  G+LG G     VS  HP   +        
Sbjct: 567 HVVQIAAHCEGKHVMVLSSANEVWSWGAGDGGRLGHGD---TVSKEHPTMIVG------- 616

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDD 339
                            +    V GI CG  +SA IT AG L T+G G YG+ G G++DD
Sbjct: 617 -----------------LHEKQVCGIYCGASYSAAITIAGELFTWGRGTYGRLGHGNSDD 659

Query: 340 ELSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
           +L P  V +L   ++  VA  +G  H++C++ +G ++A+G   FG+LG G      +P  
Sbjct: 660 KLVPTQVQALKSYKVVDVALGSGDAHSMCVTDNGLLFAWGDGDFGKLGNGSCNGSPIPVQ 719

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEG 456
           +D  +L NV    +  G++ +  ++ DG ++ WG    G+LG G+    N+P  V  +EG
Sbjct: 720 ID--TLVNV--SRIYSGSQFSVALSCDGTLYTWGKGHGGRLGHGNSEHSNVPKLVRALEG 775

Query: 457 CVPRNVACGWWHTLLL 472
               +VA G  H L L
Sbjct: 776 KKIADVAVGSAHCLAL 791



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 97/317 (30%), Positives = 138/317 (43%), Gaps = 82/317 (25%)

Query: 212  PCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP 269
            P LV     V I  VA  +GG+H LALS  G+V+ WG G +G+LG G+R           
Sbjct: 4013 PTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNR----------- 4061

Query: 270  CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
                SY  DR   +   S           G  V  IACG  HSA IT  G +LT+G G Y
Sbjct: 4062 ---DSY--DRPKLIEALS-----------GIGVIDIACGSAHSACITSQGHVLTWGKGRY 4105

Query: 330  GQCGQGSTDDELSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTG 387
            G+ G G ++D+L P  V +LLG +   +A  +G   T+CI+ D +V+++G   +G+LG G
Sbjct: 4106 GRLGHGDSEDQLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG 4165

Query: 388  GDQAETLPRLLDA----------------------------------------------- 400
            G     +P  +++                                               
Sbjct: 4166 GSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRP 4225

Query: 401  ---PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEG 456
                +L+     S++ G+ H    +D G+VF WG N  GQLG G V     P  V +++G
Sbjct: 4226 KKVAALQGKKIISIATGSLHCVACSDSGEVFTWGDNDEGQLGDGTVTAIQRPRLVQSLQG 4285

Query: 457  CVPRNVACGWWHTLLLA 473
                 V CG  HTL L+
Sbjct: 4286 KHIVKVICGSAHTLALS 4302



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 85/310 (27%), Positives = 137/310 (44%), Gaps = 84/310 (27%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GG+H +AL+  G+V+ WG G +G+LG G+R+ +   P  I  + +   +D  
Sbjct: 2979 VKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLTL-EKPKLIESLRTKRVRD-- 3035

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                    IACG  HSA IT +G L T+G G YG+ G G    +
Sbjct: 3036 ------------------------IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQ 3071

Query: 341  LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V++L G ++  VA G     T+C++ +G V+++G   FG+LG GG +  ++P  +
Sbjct: 3072 LKPKLVTTLQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGGSEGCSVPHQV 3131

Query: 399  DAPSLENVHSKSVSCGAR------------------------------------------ 416
            +   L +V    + CGA+                                          
Sbjct: 3132 E--RLNSVGVMQIECGAQFSLALTKSGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGK 3189

Query: 417  ---HTAV-------IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACG 465
               H AV       + D G+V+ WG N +GQ G G+ +    P+ V  ++G     VACG
Sbjct: 3190 KVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQGSGNTVVNKKPNLVLGLDGVFVNRVACG 3249

Query: 466  WWHTLLLAVP 475
              H++  ++P
Sbjct: 3250 SSHSVAWSLP 3259



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 95/325 (29%), Positives = 139/325 (42%), Gaps = 52/325 (16%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V   +G  HC+A++  GEV++WG  E         D   G G ++D ++R    L E +S
Sbjct: 4027 VAVNSGGKHCLALSSDGEVFSWGEGE---------DGKLGHG-NRDSYDRPK--LIEALS 4074

Query: 161  PRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPG 220
                +  + G   S           S+   ++  K        GD      P LV    G
Sbjct: 4075 GIGVIDIACGSAHSACIT-------SQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEALLG 4127

Query: 221  VRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPC-IESSYGK 277
             R   +A  +G   TL ++D   VW WG G  G+LG G      S    IP  IES    
Sbjct: 4128 YRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGG-----SDGCKIPMKIES---- 4178

Query: 278  DRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST 337
                               + G  V  + CG + S  +T +G++ T+G G Y + G G+T
Sbjct: 4179 -------------------LAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNT 4219

Query: 338  DDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
            D    P  V++L G +I  +A G  H +  S  G+V+ +G N  GQLG G   A   PRL
Sbjct: 4220 DHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVFTWGDNDEGQLGDGTVTAIQRPRL 4279

Query: 398  LDAPSLENVHSKSVSCGARHTAVIA 422
            +   SL+  H   V CG+ HT  ++
Sbjct: 4280 VQ--SLQGKHIVKVICGSAHTLALS 4302



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 101/345 (29%), Positives = 143/345 (41%), Gaps = 58/345 (16%)

Query: 83   GKHGEIPEPFPLPT-EASIVKAAA---GWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLS 138
            G +  +P P  +P     +VK  A   G  H +A+T  G+V++WG  E        G L 
Sbjct: 2960 GHNNNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGE-------DGKLG 3012

Query: 139  TGTGLDKDVFERQSSFLTEQVSPRSQ-VSRSSGGTSSGTDGR-GSGEEGSKRRRISLAKQ 196
             G  L  +  +   S  T++V   +   S S+  TSSG     G GE G           
Sbjct: 3013 HGNRLTLEKPKLIESLRTKRVRDIACGSSHSAAITSSGELYTWGLGEYGRL--------- 3063

Query: 197  TAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGR--HTLALSDIGQVWGWGYGGEGQLG 254
                   GD      P LVT   G R+  VA G R   TL L++ G V+ WG G  G+LG
Sbjct: 3064 -----GHGDNCTQLKPKLVTTLQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLG 3118

Query: 255  LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAV 314
             G      S PH +                   +NS G         V  I CG + S  
Sbjct: 3119 RGGS-EGCSVPHQVE-----------------RLNSVG---------VMQIECGAQFSLA 3151

Query: 315  ITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVY 374
            +T +G + T+G G Y + G G+      P  +  L G ++  VA G  H + ++  G VY
Sbjct: 3152 LTKSGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVY 3211

Query: 375  AFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            A+G N  GQ G+G       P L+    L+ V    V+CG+ H+ 
Sbjct: 3212 AWGDNDHGQQGSGNTVVNKKPNLV--LGLDGVFVNRVACGSSHSV 3254



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 75/229 (32%), Positives = 110/229 (48%), Gaps = 36/229 (15%)

Query: 242  VWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPG 299
            ++GWG+   GQLG   GSRI+M     P PC                    E      P 
Sbjct: 3939 IFGWGHNHRGQLGGLDGSRIKM-----PTPC--------------------EALSLLRPI 3973

Query: 300  NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA- 358
                 IA G +    +T  G L   G+G  G+ G G TD   +P  V SL  + I+ VA 
Sbjct: 3974 Q----IAGGEQTLYAVTPDGKLYATGYGAGGRLGIGGTDSVSAPTLVESLQHVIIKKVAV 4029

Query: 359  -AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARH 417
             +G  H + +SSDG+V+++G  + G+LG G   +   P+L++A  L  +    ++CG+ H
Sbjct: 4030 NSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRPKLIEA--LSGIGVIDIACGSAH 4087

Query: 418  TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
            +A I   G V  WG  +YG+LG GD  D+  P  V  + G    ++ACG
Sbjct: 4088 SACITSQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEALLGYRAIDIACG 4136



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 114/250 (45%), Gaps = 30/250 (12%)

Query: 226  VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
            +A G +    +S  G+++  G G  G+LGLG     V +P  +P +     K  +     
Sbjct: 2930 IAGGSKSLFIVSQDGKLYACGEGTNGRLGLGHN-NNVPTPRQVPILNQYVVKKVA----- 2983

Query: 286  GSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNC 345
                               +  GG+H+  +T  G + ++G G  G+ G G+      P  
Sbjct: 2984 -------------------VHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLTLEKPKL 3024

Query: 346  VSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLEN 405
            + SL   ++  +A G  H+  I+S G++Y +G  ++G+LG G +  +  P+L+   +L+ 
Sbjct: 3025 IESLRTKRVRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLV--TTLQG 3082

Query: 406  VHSKSVSCGAR--HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCV-PRNV 462
                 V+CG+R   T  + ++G VF WG   +G+LG G     ++P QV     V    +
Sbjct: 3083 HRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGGSEGCSVPHQVERLNSVGVMQI 3142

Query: 463  ACGWWHTLLL 472
             CG   +L L
Sbjct: 3143 ECGAQFSLAL 3152



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 59/222 (26%), Positives = 95/222 (42%), Gaps = 37/222 (16%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           G+ +    P  V      ++  VA  +G  H++ ++D G ++ WG G  G+LG GS    
Sbjct: 655 GNSDDKLVPTQVQALKSYKVVDVALGSGDAHSMCVTDNGLLFAWGDGDFGKLGNGS---C 711

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
             SP P+         D    +SR                   I  G + S  ++  G L
Sbjct: 712 NGSPIPVQI-------DTLVNVSR-------------------IYSGSQFSVALSCDGTL 745

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
            T+G G  G+ G G+++    P  V +L G +I  VA G  H + ++S G++Y +G N +
Sbjct: 746 YTWGKGHGGRLGHGNSEHSNVPKLVRALEGKKIADVAVGSAHCLALTSSGELYGWGRNDY 805

Query: 382 GQL---GTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            Q+   G   D     P L   P+L       ++CGA  + V
Sbjct: 806 QQICPSGVSRDPIIHSPILTTPPTLR---ISGMTCGAAQSIV 844



 Score = 47.4 bits (111), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 91/226 (40%), Gaps = 42/226 (18%)

Query: 40  LTVGSAWRDVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGK--HGEIPEPFPLP 95
           + VG   + VCG  CG  ++ AI+ + +L TWG          T G+  HG   +   +P
Sbjct: 613 MIVGLHEKQVCGIYCGASYSAAITIAGELFTWGRG--------TYGRLGHGNSDDKL-VP 663

Query: 96  TEASIVKAA--------AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDV 147
           T+   +K+         +G AH + VT+ G ++ WG  +       FG L  G+      
Sbjct: 664 TQVQALKSYKVVDVALGSGDAHSMCVTDNGLLFAWGDGD-------FGKLGNGSC----- 711

Query: 148 FERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDEN 207
                S +  Q+     VSR   G+         G         +  K        G+  
Sbjct: 712 ---NGSPIPVQIDTLVNVSRIYSGSQFSVALSCDGT------LYTWGKGHGGRLGHGNSE 762

Query: 208 LSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQL 253
            S  P LV    G +IA VA G  H LAL+  G+++GWG     Q+
Sbjct: 763 HSNVPKLVRALEGKKIADVAVGSAHCLALTSSGELYGWGRNDYQQI 808


>gi|426380328|ref|XP_004056825.1| PREDICTED: RCC1 domain-containing protein 1 isoform 1 [Gorilla
           gorilla gorilla]
 gi|426380330|ref|XP_004056826.1| PREDICTED: RCC1 domain-containing protein 1 isoform 2 [Gorilla
           gorilla gorilla]
          Length = 376

 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 110/234 (47%), Gaps = 45/234 (19%)

Query: 284 SRGSVNSEGPGFR--VPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL 341
           +R  V+   P +R   P    + +  G  H+ ++  AG + ++G G +GQ G G+ + EL
Sbjct: 140 ARAYVSPRAPFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAEL 199

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLG---------------- 385
            P  + +L G+ +  VAAG WH++C+S  GD+Y +G N+ GQL                 
Sbjct: 200 EPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVARE 259

Query: 386 -------------TGGDQ---------AETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
                        TGG +          +  P LLD P      +   SCG+RHTAV+  
Sbjct: 260 ATELNEDGSQVKRTGGAEDGAPAPFIAVQPFPALLDLPM--GSDAVKASCGSRHTAVVTR 317

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI---EGCVPRNVACGWWHTLLLAV 474
            G+++ WGW KYGQLG  D    + P +V     +    + V CG W+T + AV
Sbjct: 318 TGELYTWGWGKYGQLGHEDTTSLDRPRRVEYFVDKQLQVKAVTCGPWNTYVYAV 371



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 78/173 (45%), Gaps = 15/173 (8%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P L+    G+ +A VAAGG H++ +S+ G ++ WG+   GQL L +R  +      +   
Sbjct: 201 PRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTR-NLAEDGETVARE 259

Query: 272 ESSYGKDRSAALSRGSVNSEGPG-----------FRVP-GNYVKGIACGGRHSAVITDAG 319
            +   +D S     G      P              +P G+     +CG RH+AV+T  G
Sbjct: 260 ATELNEDGSQVKRTGGAEDGAPAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTG 319

Query: 320 ALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG--IQIEGVAAGLWHTICISSD 370
            L T+GWG YGQ G   T     P  V   +   +Q++ V  G W+T   + +
Sbjct: 320 ELYTWGWGKYGQLGHEDTTSLDRPRRVEYFVDKQLQVKAVTCGPWNTYVYAVE 372



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 88/215 (40%), Gaps = 60/215 (27%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEI--------PEPFPLPTEASIVKA- 103
           G   A+ +  + ++ +WG            G+HG++         EP  L     +V A 
Sbjct: 166 GAEHALLLDAAGQVFSWGG-----------GRHGQLGHGTLEAELEPRLLEALQGLVMAE 214

Query: 104 -AAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGT---GLDKDVFERQSSFLTEQV 159
            AAG  H V V+E G++Y WGW E        G L+  T     D +   R+++ L E  
Sbjct: 215 VAAGGWHSVCVSETGDIYIWGWNES-------GQLALPTRNLAEDGETVAREATELNED- 266

Query: 160 SPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
              SQV R+ G            E+G+    I++                 FP L+ L  
Sbjct: 267 --GSQVKRTGGA-----------EDGAPAPFIAV---------------QPFPALLDLPM 298

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG 254
           G      + G RHT  ++  G+++ WG+G  GQLG
Sbjct: 299 GSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLG 333


>gi|326923406|ref|XP_003207927.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Meleagris gallopavo]
          Length = 1048

 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 113/249 (45%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  HTLAL+D GQV+ WG   +GQLGL      +  P  I             +
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNI------------KS 133

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDEL 341
           LS   +                +ACG  HS  ++    + ++G   YGQ G G     + 
Sbjct: 134 LSEIQIVQ--------------VACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQN 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP+ + SLLGI    +AAG  H+  ++  G ++ +G N+FGQLG   D    +P LL   
Sbjct: 180 SPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLK-- 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL       + CG  HTA +  +G VF +G   YGQLG         P +V  + G +  
Sbjct: 238 SLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSLVT 297

Query: 461 NVACGWWHT 469
            + CG  HT
Sbjct: 298 QITCGRQHT 306



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 98/355 (27%), Positives = 145/355 (40%), Gaps = 75/355 (21%)

Query: 47  RDVCGGGCGF--AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           RDV   GCG    + + D   + T G  +DLGQ  +   K  + PE        +IV  +
Sbjct: 37  RDV---GCGLRHTVFVLDDGTVYTCGC-NDLGQ--LGHEKARKRPEHVGALDAQNIVAVS 90

Query: 105 AGWAHCVAVTEGGEVYTWGW-----------KECVPSGRVFGDLSTGTGLDKDVFERQSS 153
            G AH +A+ + G+VY WG            +EC+   R    LS               
Sbjct: 91  CGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEI------------- 137

Query: 154 FLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPC 213
               Q+   +     S   S G++    G+  +K  ++ L  +  + +S         P 
Sbjct: 138 ----QIVQVACGYYHSLALSKGSEVFSWGQ--NKYGQLGLGYEYKKQNS---------PH 182

Query: 214 LVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES 273
           ++    G+  A +AAGG H+  L+  G ++GWG    GQLGL                  
Sbjct: 183 VIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND---------------- 226

Query: 274 SYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCG 333
               DR       S+ ++          V  I CG  H+A +T  G + TFG G YGQ G
Sbjct: 227 --DNDRYVPTLLKSLRTQK---------VVHICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 334 QGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFGGNQFGQLGTG 387
             ST  E++P  V  L+G  +  +  G  HT   + S G +Y+FG    GQLGTG
Sbjct: 276 HNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTG 330



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/160 (36%), Positives = 81/160 (50%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      L  +I  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G ++A   P  + A   +N+   +VSCG  HT  + D G+V+ WG    GQL
Sbjct: 61  NDLGQL--GHEKARKRPEHVGALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLATDGQL 116

Query: 439 GLGDV-----IDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLPGTEECIRVPRNIKSLSEIQIV---QVACGYYHSLALS 153



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 73/306 (23%), Positives = 125/306 (40%), Gaps = 52/306 (16%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D       + +   +P      +E  IV+ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQV--SPR 162
            G+ H +A+++G EV++WG  +       +G L  G    K    + S  + + +   P 
Sbjct: 144 CGYYHSLALSKGSEVFSWGQNK-------YGQLGLGYEYKK----QNSPHVIKSLLGIPF 192

Query: 163 SQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVR 222
           +Q+  ++GG  S          G  R +              D+N    P L+      +
Sbjct: 193 AQI--AAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDDNDRYVPTLLKSLRTQK 243

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +              
Sbjct: 244 VVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV-------------- 288

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDEL 341
                       F + G+ V  I CG +H +A +  +G + +FG G  GQ G G+T +  
Sbjct: 289 ------------FELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRK 336

Query: 342 SPNCVS 347
           SP  V 
Sbjct: 337 SPFTVK 342


>gi|449681031|ref|XP_002154536.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
           [Hydra magnipapillata]
          Length = 1132

 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 120/234 (51%), Gaps = 30/234 (12%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           +++AT   G  HTLA++D G+V+ WG G  G+LG G+  R    P  I  +++       
Sbjct: 374 IQLATSLGGDGHTLAVADSGEVFSWGDGDYGKLGHGNSERQ-RKPKQIIALQAE------ 426

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                               +V   +CG +HSAV+T  G + TFG G YG  G G    +
Sbjct: 427 --------------------HVVQASCGFKHSAVLTKDGKVFTFGQGQYGILGDGGNSPQ 466

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDG-DVYAFGGNQFGQLGTGGDQAETLPRLLD 399
            +P  + SL    I  +A G  HT+ ++++G  +YA+G  +FG+LG G     ++P L+D
Sbjct: 467 KTPQLILSLKNEHISQIACGKDHTLALANNGKKLYAWGDGEFGKLGLGSTSVRSIPNLVD 526

Query: 400 APSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT 453
             S  NV  K ++CG++ + V+A +G ++ +G   +  +   D++D  IP  V+
Sbjct: 527 --SYRNVCLKKIACGSKFSIVLATNGYLYTFGHKDFLGIAETDLLDNTIPQIVS 578



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 54/168 (32%), Positives = 97/168 (57%), Gaps = 4/168 (2%)

Query: 308 GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI 367
           G  H+  + D+G + ++G G YG+ G G+++ +  P  + +L    +   + G  H+  +
Sbjct: 382 GDGHTLAVADSGEVFSWGDGDYGKLGHGNSERQRKPKQIIALQAEHVVQASCGFKHSAVL 441

Query: 368 SSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDG-K 426
           + DG V+ FG  Q+G LG GG+  +  P+L+   SL+N H   ++CG  HT  +A++G K
Sbjct: 442 TKDGKVFTFGQGQYGILGDGGNSPQKTPQLI--LSLKNEHISQIACGKDHTLALANNGKK 499

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLA 473
           ++ WG  ++G+LGLG    R+IP+ V +      + +ACG   +++LA
Sbjct: 500 LYAWGDGEFGKLGLGSTSVRSIPNLVDSYRNVCLKKIACGSKFSIVLA 547



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 61/185 (32%), Positives = 98/185 (52%), Gaps = 6/185 (3%)

Query: 293 PGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG- 351
           P        V+ I CG   + ++   G++   G G YG+ GQG++DDE S   ++ L G 
Sbjct: 312 PNLVSTFKQVREIVCGQNCTFLLQTNGSVFACGEGTYGRLGQGTSDDEHSLVPITELQGY 371

Query: 352 --IQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSK 409
             IQ+     G  HT+ ++  G+V+++G   +G+LG G  + +  P+ + A  L+  H  
Sbjct: 372 CIIQLATSLGGDGHTLAVADSGEVFSWGDGDYGKLGHGNSERQRKPKQIIA--LQAEHVV 429

Query: 410 SVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWH 468
             SCG +H+AV+  DGKVF +G  +YG LG G    +  P  + +++      +ACG  H
Sbjct: 430 QASCGFKHSAVLTKDGKVFTFGQGQYGILGDGGNSPQKTPQLILSLKNEHISQIACGKDH 489

Query: 469 TLLLA 473
           TL LA
Sbjct: 490 TLALA 494



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 113/418 (27%), Positives = 172/418 (41%), Gaps = 71/418 (16%)

Query: 14  VFMWG-YLPGALP--QRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWG 70
           V++WG  + G LP  Q    L P +V    T       VCG  C F +  + S      G
Sbjct: 290 VYVWGSNIHGELPGLQGKTCLQPNLVS---TFKQVREIVCGQNCTFLLQTNGSVFACGEG 346

Query: 71  STDDLGQSYVTSGKHGEIPEPFPLPTEAS---IVKAAA---GWAHCVAVTEGGEVYTWGW 124
           +   LGQ   +  +H  +P      TE     I++ A    G  H +AV + GEV++WG 
Sbjct: 347 TYGRLGQG-TSDDEHSLVP-----ITELQGYCIIQLATSLGGDGHTLAVADSGEVFSWGD 400

Query: 125 KECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEE 184
            +       +G L  G        ERQ         P+  ++  +      + G      
Sbjct: 401 GD-------YGKLGHGNS------ERQRK-------PKQIIALQAEHVVQASCGFKHSAV 440

Query: 185 GSKRRRISLAKQTAESSSSGD--ENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQ- 241
            +K  ++    Q  +    GD   +    P L+       I+ +A G  HTLAL++ G+ 
Sbjct: 441 LTKDGKVFTFGQ-GQYGILGDGGNSPQKTPQLILSLKNEHISQIACGKDHTLALANNGKK 499

Query: 242 VWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNY 301
           ++ WG G  G+LGLGS     +S   IP +  SY   R+  L                  
Sbjct: 500 LYAWGDGEFGKLGLGS-----TSVRSIPNLVDSY---RNVCL------------------ 533

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
            K IACG + S V+   G L TFG   +    +    D   P  VSSL+   I  +A G 
Sbjct: 534 -KKIACGSKFSIVLATNGYLYTFGHKDFLGIAETDLLDNTIPQIVSSLMPHPIIDIAVGC 592

Query: 362 WHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            + + + + G+++ +G N+ GQLG G      LP+L+   S  N+    +S G  H A
Sbjct: 593 NYILALDNSGNIWGWGTNEEGQLGIGTTNPHYLPQLVCTFSGTNI--TRLSAGTTHCA 648



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 4/135 (2%)

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG-GDQAETLPRLLD 399
           L PN VS+    Q+  +  G   T  + ++G V+A G   +G+LG G  D   +L  + +
Sbjct: 310 LQPNLVSTFK--QVREIVCGQNCTFLLQTNGSVFACGEGTYGRLGQGTSDDEHSLVPITE 367

Query: 400 APSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCV 458
                 +   +   G  HT  +AD G+VF WG   YG+LG G+   +  P Q+  ++   
Sbjct: 368 LQGYCIIQLATSLGGDGHTLAVADSGEVFSWGDGDYGKLGHGNSERQRKPKQIIALQAEH 427

Query: 459 PRNVACGWWHTLLLA 473
               +CG+ H+ +L 
Sbjct: 428 VVQASCGFKHSAVLT 442



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 11/78 (14%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  +A G  + LAL + G +WGWG   EGQLG+G+     ++PH +P +  ++       
Sbjct: 585 IIDIAVGCNYILALDNSGNIWGWGTNEEGQLGIGT-----TNPHYLPQLVCTFSGTNITR 639

Query: 283 LSRGSV------NSEGPG 294
           LS G+       NS+ P 
Sbjct: 640 LSAGTTHCAAWSNSQSPS 657


>gi|384947464|gb|AFI37337.1| E3 ISG15--protein ligase HERC5 [Macaca mulatta]
          Length = 1023

 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 85/278 (30%), Positives = 130/278 (46%), Gaps = 36/278 (12%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI------PCIESSY 275
           +I  +  G  H+LALS  G+++ WG    GQLG+G      ++P  +      P  + S 
Sbjct: 138 KIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAGVPLAQISA 197

Query: 276 GKDRSAALSR-GSVNS-----------------EGPGF--RVPGNYVKGIACGGRHSAVI 315
           G+  S ALS  G++ S                 + P     +    V+ +ACGG HSA++
Sbjct: 198 GEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGSHSALL 257

Query: 316 TDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD-GDVY 374
           T  G L TFG G +GQ G  ST +EL P  V+ L+G ++  +A G WHT+   SD G V+
Sbjct: 258 TQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYVSDFGKVF 317

Query: 375 AFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNK 434
           +FG  + GQLG GG   + +P  +   S E +  +S +       +   +  +  W   +
Sbjct: 318 SFGSGKDGQLGNGGTLDQLIPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWIKKE 377

Query: 435 YGQLGLGDVIDRNIPSQVTIEGCVPR---NVACGWWHT 469
              + L     R IP+    EG V R   +V    WH+
Sbjct: 378 NSYVNLK----RTIPT--LNEGTVKRWIADVETKRWHS 409



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 72/221 (32%), Positives = 112/221 (50%), Gaps = 7/221 (3%)

Query: 252 QLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRH 311
           +LG   +I  V        I SS GK      S   + SE     +    +  I CG  H
Sbjct: 92  KLGKNMKIHSVDQGADHMLILSSDGKPFEYDYSMKHLRSESI---LQEKKIIQITCGDYH 148

Query: 312 SAVITDAGALLTFGWGLYGQCGQGST-DDELSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
           S  ++  G L  +G  L+GQ G G T     +P  V  L G+ +  ++AG  H++ +S  
Sbjct: 149 SLALSKGGELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMS 208

Query: 371 GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
           G++Y++G N+FGQLG G  +++  P L++A  L+N   + ++CG  H+A++  DG +F +
Sbjct: 209 GNIYSWGKNEFGQLGLGHTESKDSPSLIEA--LDNQKVEFLACGGSHSALLTQDGLLFTF 266

Query: 431 GWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
           G  K+GQLG     +   P  V  + G     +ACG WHTL
Sbjct: 267 GAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTL 307



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 104/249 (41%), Gaps = 61/249 (24%)

Query: 47  RDVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGE--IPEPFPLPTEASIV- 101
           + +    CG   ++A+S   +L  WG              HG+  +   FP  T   IV 
Sbjct: 137 KKIIQITCGDYHSLALSKGGELFAWGQ-----------NLHGQLGVGRTFPSTTTPQIVE 185

Query: 102 --------KAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSS 153
                   + +AG AH +A++  G +Y+WG  E       FG L  G    KD     S 
Sbjct: 186 HLAGVPLAQISAGEAHSMALSMSGNIYSWGKNE-------FGQLGLGHTESKD-----SP 233

Query: 154 FLTEQVSPRSQVSRSSGGTSSG---TDGR----GSGEEGSKRRRISLAKQTAESSSSGDE 206
            L E +  +     + GG+ S     DG     G+G+ G          Q   +S+  + 
Sbjct: 234 SLIEALDNQKVEFLACGGSHSALLTQDGLLFTFGAGKHG----------QLGHNSTQNEL 283

Query: 207 NLSAFPCLVTLNPGVRIATVAAGGRHTLA-LSDIGQVWGWGYGGEGQLGLGSRIRMVSSP 265
                PCLV    G R+  +A G  HTLA +SD G+V+ +G G +GQLG G  +  +   
Sbjct: 284 R----PCLVAELVGNRVTQIACGRWHTLAYVSDFGKVFSFGSGKDGQLGNGGTLDQLI-- 337

Query: 266 HPIPCIESS 274
            P+P   SS
Sbjct: 338 -PLPVKVSS 345



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 86/213 (40%), Gaps = 50/213 (23%)

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
           + I C  R  AV+   GA +     L G  G  +      P C+     ++I  V  G  
Sbjct: 54  RQICCSPRRLAVLERGGAGVQVHQVLAGSGGART------PKCIKLGKNMKIHSVDQGAD 107

Query: 363 HTICISSD----------------------------------------GDVYAFGGNQFG 382
           H + +SSD                                        G+++A+G N  G
Sbjct: 108 HMLILSSDGKPFEYDYSMKHLRSESILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHG 167

Query: 383 QLGTGGD-QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
           QLG G    + T P++++   L  V    +S G  H+  ++  G ++ WG N++GQLGLG
Sbjct: 168 QLGVGRTFPSTTTPQIVE--HLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLG 225

Query: 442 DVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLA 473
               ++ PS +  ++      +ACG  H+ LL 
Sbjct: 226 HTESKDSPSLIEALDNQKVEFLACGGSHSALLT 258


>gi|387541824|gb|AFJ71539.1| E3 ISG15--protein ligase HERC5 [Macaca mulatta]
          Length = 1023

 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 85/278 (30%), Positives = 130/278 (46%), Gaps = 36/278 (12%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI------PCIESSY 275
           +I  +  G  H+LALS  G+++ WG    GQLG+G      ++P  +      P  + S 
Sbjct: 138 KIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAGVPLAQISA 197

Query: 276 GKDRSAALSR-GSVNS-----------------EGPGF--RVPGNYVKGIACGGRHSAVI 315
           G+  S ALS  G++ S                 + P     +    V+ +ACGG HSA++
Sbjct: 198 GEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGSHSALL 257

Query: 316 TDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD-GDVY 374
           T  G L TFG G +GQ G  ST +EL P  V+ L+G ++  +A G WHT+   SD G V+
Sbjct: 258 TQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYVSDFGKVF 317

Query: 375 AFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNK 434
           +FG  + GQLG GG   + +P  +   S E +  +S +       +   +  +  W   +
Sbjct: 318 SFGSGKDGQLGNGGTLDQLIPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWIKKE 377

Query: 435 YGQLGLGDVIDRNIPSQVTIEGCVPR---NVACGWWHT 469
              + L     R IP+    EG V R   +V    WH+
Sbjct: 378 NSYVNL----KRTIPT--LNEGTVKRWIADVETKRWHS 409



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 72/221 (32%), Positives = 112/221 (50%), Gaps = 7/221 (3%)

Query: 252 QLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRH 311
           +LG   +I  V        I SS GK      S   + SE     +    +  I CG  H
Sbjct: 92  KLGKNMKIHSVDQGADHMLILSSDGKPFEYDYSMKHLRSESI---LQEKKIIQITCGDYH 148

Query: 312 SAVITDAGALLTFGWGLYGQCGQGST-DDELSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
           S  ++  G L  +G  L+GQ G G T     +P  V  L G+ +  ++AG  H++ +S  
Sbjct: 149 SLALSKGGELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMS 208

Query: 371 GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
           G++Y++G N+FGQLG G  +++  P L++A  L+N   + ++CG  H+A++  DG +F +
Sbjct: 209 GNIYSWGKNEFGQLGLGHTESKDSPSLIEA--LDNQKVEFLACGGSHSALLTQDGLLFTF 266

Query: 431 GWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
           G  K+GQLG     +   P  V  + G     +ACG WHTL
Sbjct: 267 GAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTL 307



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 104/249 (41%), Gaps = 61/249 (24%)

Query: 47  RDVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGE--IPEPFPLPTEASIV- 101
           + +    CG   ++A+S   +L  WG              HG+  +   FP  T   IV 
Sbjct: 137 KKIIQITCGDYHSLALSKGGELFAWGQ-----------NLHGQLGVGRTFPSTTTPQIVE 185

Query: 102 --------KAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSS 153
                   + +AG AH +A++  G +Y+WG  E       FG L  G    KD     S 
Sbjct: 186 HLAGVPLAQISAGEAHSMALSMSGNIYSWGKNE-------FGQLGLGHTESKD-----SP 233

Query: 154 FLTEQVSPRSQVSRSSGGTSSG---TDGR----GSGEEGSKRRRISLAKQTAESSSSGDE 206
            L E +  +     + GG+ S     DG     G+G+ G          Q   +S+  + 
Sbjct: 234 SLIEALDNQKVEFLACGGSHSALLTQDGLLFTFGAGKHG----------QLGHNSTQNEL 283

Query: 207 NLSAFPCLVTLNPGVRIATVAAGGRHTLA-LSDIGQVWGWGYGGEGQLGLGSRIRMVSSP 265
                PCLV    G R+  +A G  HTLA +SD G+V+ +G G +GQLG G  +  +   
Sbjct: 284 R----PCLVAELVGNRVTQIACGRWHTLAYVSDFGKVFSFGSGKDGQLGNGGTLDQLI-- 337

Query: 266 HPIPCIESS 274
            P+P   SS
Sbjct: 338 -PLPVKVSS 345



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 86/213 (40%), Gaps = 50/213 (23%)

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
           + I C  R  AV+   GA +     L G  G  +      P C+     ++I  V  G  
Sbjct: 54  RQICCSPRRLAVLERGGAGVQVHQVLAGSGGART------PKCIKLGKNMKIHSVDQGAD 107

Query: 363 HTICISSD----------------------------------------GDVYAFGGNQFG 382
           H + +SSD                                        G+++A+G N  G
Sbjct: 108 HMLILSSDGKPFEYDYSMKHLRSESILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHG 167

Query: 383 QLGTGGD-QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
           QLG G    + T P++++   L  V    +S G  H+  ++  G ++ WG N++GQLGLG
Sbjct: 168 QLGVGRTFPSTTTPQIVE--HLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLG 225

Query: 442 DVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLA 473
               ++ PS +  ++      +ACG  H+ LL 
Sbjct: 226 HTESKDSPSLIEALDNQKVEFLACGGSHSALLT 258


>gi|191961780|ref|NP_001122122.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
           [Xenopus (Silurana) tropicalis]
 gi|189441713|gb|AAI67508.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
          Length = 1049

 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 80/270 (29%), Positives = 131/270 (48%), Gaps = 38/270 (14%)

Query: 205 DENLSAFP--CLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMV 262
           DE +   P  C   +N  VR   V  G RHT+ + D G V+  G    GQLG        
Sbjct: 18  DEEVVLEPRRCDFFINKNVR--DVGCGSRHTVFVLDDGTVYTCGCNDLGQLG-------- 67

Query: 263 SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL 322
                       + K R      G+++++          +  ++CG  H+  + D G + 
Sbjct: 68  ------------HDKSRRKPEQVGALDAQ---------IIVAVSCGEAHTLALNDKGQVF 106

Query: 323 TFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
           ++G  +YGQ G  + ++ +  P  + SL  +QI  VA G  H++ +S D D++++G NQ+
Sbjct: 107 SWGHAVYGQIGLSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDIFSWGQNQY 166

Query: 382 GQLGTGGD-QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL 440
           GQLG G + + E  PR +   SL  +    ++ G  H+  +   G +F WG NK+GQLGL
Sbjct: 167 GQLGLGLEIKKECAPRHIK--SLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGL 224

Query: 441 GDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            D  DRN+P+ + ++      ++ CG  HT
Sbjct: 225 TDETDRNVPALLKSLRSQKIIHICCGEDHT 254



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/260 (31%), Positives = 119/260 (45%), Gaps = 34/260 (13%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS-----RI-RMVSSPHPIPCIESSYG 276
           I  V+ G  HTLAL+D GQV+ WG+   GQ+GL +     R+ R + S   +  ++ + G
Sbjct: 86  IVAVSCGEAHTLALNDKGQVFSWGHAVYGQIGLSTAEEYIRVPRNIKSLSDVQIVQVACG 145

Query: 277 KDRSAALSRGS---------VNSEGPGFRVPGN----YVKG--------IACGGRHSAVI 315
              S ALS+ S             G G  +       ++K         IA GG HS  +
Sbjct: 146 HHHSLALSKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGGGHSFAL 205

Query: 316 TDAGALLTFGWGL--YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDV 373
           T +GA+  FGWG   +GQ G     D   P  + SL   +I  +  G  HT  ++ +G V
Sbjct: 206 TISGAI--FGWGRNKFGQLGLTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKEGGV 263

Query: 374 YAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGW 432
           + FG   +GQLG      E  PR      L       ++CG +HT A +   G+++ +G 
Sbjct: 264 FTFGAGGYGQLGHNSTNHEVNPR--KVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGL 321

Query: 433 NKYGQLGLGDVIDRNIPSQV 452
              GQLG G  I+R  P  V
Sbjct: 322 GGNGQLGTGSTINRKSPFTV 341



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 99/355 (27%), Positives = 148/355 (41%), Gaps = 55/355 (15%)

Query: 37  RLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPT 96
           R    +    RDV G G    + + D   + T G  +DLGQ  +   K    PE      
Sbjct: 27  RCDFFINKNVRDV-GCGSRHTVFVLDDGTVYTCGC-NDLGQ--LGHDKSRRKPEQVGALD 82

Query: 97  EASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLT 156
              IV  + G AH +A+ + G+V++WG         V+G +   T  +     R    L+
Sbjct: 83  AQIIVAVSCGEAHTLALNDKGQVFSWGHA-------VYGQIGLSTAEEYIRVPRNIKSLS 135

Query: 157 E-QVSPRSQVSRSSGGTSSGTD--GRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPC 213
           + Q+   +     S   S  +D    G  + G     + + K+ A             P 
Sbjct: 136 DVQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIKKECA-------------PR 182

Query: 214 LVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES 273
            +    G+  A +AAGG H+ AL+  G ++GWG    GQLGL                  
Sbjct: 183 HIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLTDE--------------- 227

Query: 274 SYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCG 333
               DR+      S+ S+          +  I CG  H+A +T  G + TFG G YGQ G
Sbjct: 228 ---TDRNVPALLKSLRSQK---------IIHICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 334 QGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFGGNQFGQLGTG 387
             ST+ E++P  V  L+G  +  +A G  HT+  + S G +Y+FG    GQLGTG
Sbjct: 276 HNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTG 330



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 55/160 (34%), Positives = 77/160 (48%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      +   +  V  G  HT+ +  DG VY  G 
Sbjct: 1   MLCWGNTSFGQLGLGGIDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G D++   P  + A   + +   +VSCG  HT  + D G+VF WG   YGQ+
Sbjct: 61  NDLGQL--GHDKSRRKPEQVGALDAQII--VAVSCGEAHTLALNDKGQVFSWGHAVYGQI 116

Query: 439 GLGDV-----IDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   ++      VACG  H+L L+
Sbjct: 117 GLSTAEEYIRVPRNIKSLSDVQIV---QVACGHHHSLALS 153


>gi|148223431|ref|NP_001085755.1| HECT and RLD domain containing E3 ubiquitin protein ligase family
           member 6 [Xenopus laevis]
 gi|49115314|gb|AAH73297.1| MGC80684 protein [Xenopus laevis]
          Length = 1028

 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 82/250 (32%), Positives = 119/250 (47%), Gaps = 27/250 (10%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  H++A+ D G ++ WG G EGQLG G      SS +  P       K  +  
Sbjct: 86  IVDVSCGTNHSVAMCDEGNIYSWGDGSEGQLGTGK----FSSKNFTP-------KRITGL 134

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGS-TDDEL 341
           L+R  +                I+CG  HS  + + G + ++G    GQ G GS   ++ 
Sbjct: 135 LNRKIIQ---------------ISCGNFHSVALAEDGRVFSWGQNKCGQLGLGSQIINQA 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           +P  V SL GI +  V AG   T  +S  G V+A+G N  GQLG   D  +   +     
Sbjct: 180 TPQLVKSLKGIPLVQVTAGGSQTFALSMSGTVFAWGRNNAGQLGFKNDAKKGTFKPYAVD 239

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRN 461
           SL ++    +SCG  HTAV+  DG V+ +G + YGQLG       ++P ++         
Sbjct: 240 SLRDLGVAYISCGEEHTAVLNKDGIVYTFGDDTYGQLGQQSGNQTSVPQKIEEYSRQVSQ 299

Query: 462 VACGWWHTLL 471
           VACG +HTLL
Sbjct: 300 VACGRYHTLL 309



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 99/222 (44%), Gaps = 48/222 (21%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI------RMVSSPHPIPCIESSY 275
           +I  ++ G  H++AL++ G+V+ WG    GQLGLGS+I      ++V S   IP ++ + 
Sbjct: 138 KIIQISCGNFHSVALAEDGRVFSWGQNKCGQLGLGSQIINQATPQLVKSLKGIPLVQVTA 197

Query: 276 GKDRSAALSR-------GSVNSEGPGFR---VPGNY------------VKGIACGGRHSA 313
           G  ++ ALS        G  N+   GF+     G +            V  I+CG  H+A
Sbjct: 198 GGSQTFALSMSGTVFAWGRNNAGQLGFKNDAKKGTFKPYAVDSLRDLGVAYISCGEEHTA 257

Query: 314 VITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDV 373
           V+   G + TFG   YGQ GQ S +    P  +      Q+  VA G +HT+       +
Sbjct: 258 VLNKDGIVYTFGDDTYGQLGQQSGNQTSVPQKIEE-YSRQVSQVACGRYHTL-------L 309

Query: 374 YAFGGNQFGQLGTG----------GDQAET--LPRLLDAPSL 403
           Y F  N+    G G           DQAE   LP   D  SL
Sbjct: 310 YVFTCNRIVSFGKGSQRQQGNDESSDQAEASQLPSAFDISSL 351



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 1/98 (1%)

Query: 373 VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGW 432
           +Y +G N FGQL    ++ E +    +    +    + VS G +H+  +  DG +   G 
Sbjct: 1   MYCWGDNCFGQLAVLEEEKEVVHFKENDYFQKKESVQKVSIGEKHSLYLLKDGTLLSCGQ 60

Query: 433 NKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTL 470
           N YGQLG      R I    ++E     +V+CG  H++
Sbjct: 61  NPYGQLGRKGNNSR-IEQISSLEAQTIVDVSCGTNHSV 97


>gi|218185898|gb|EEC68325.1| hypothetical protein OsI_36421 [Oryza sativa Indica Group]
          Length = 425

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/264 (29%), Positives = 127/264 (48%), Gaps = 44/264 (16%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI-RMVSSPHPIPCIESSYGKDRS 280
           ++  V+AG  H+ A++  G+++ WG    GQLGLG R  ++VS+P  + C+  S      
Sbjct: 126 KVVEVSAGNHHSCAVTADGKLFAWGRNSSGQLGLGKRAGKVVSTPRKVDCLADSR----- 180

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGS---- 336
                                VK +A G  HS   T+ G +L++G    G+ G G     
Sbjct: 181 ---------------------VKMVALGSEHSIATTEEGEVLSWGAAGAGRLGHGHKTSI 219

Query: 337 -----TDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
                T  E +P  + +L G++I+ +AAG+ H+ CI   G ++ FG       G  GD  
Sbjct: 220 LGFSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKGTLFIFGQKTEKGFGRSGD-- 277

Query: 392 ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG--DVIDRNIP 449
           E  P +++    E   S+ V+CG  HT V+ D G ++ WG N+ G LGLG  D++     
Sbjct: 278 ELRPTVVE----EVPFSEEVACGGYHTCVVTDSGDLYSWGSNENGCLGLGGTDMVRSPEV 333

Query: 450 SQVTIEGCVPRNVACGWWHTLLLA 473
            + ++       V+CGW HT +++
Sbjct: 334 LKSSLFKFPVSKVSCGWKHTAVIS 357



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 109/379 (28%), Positives = 163/379 (43%), Gaps = 54/379 (14%)

Query: 104 AAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRS 163
           A G AH + +TE G V+  G  +       FG L  G+ +   +   + S   E+V   S
Sbjct: 79  ACGGAHTLFLTESGRVFAAGLND-------FGQLGIGSSVTHSLEPIEVSGFDEKVVEVS 131

Query: 164 QVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRI 223
             +  S   ++  DG+      +   ++ L K+  +  S+        P  V      R+
Sbjct: 132 AGNHHSCAVTA--DGKLFAWGRNSSGQLGLGKRAGKVVST--------PRKVDCLADSRV 181

Query: 224 ATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAAL 283
             VA G  H++A ++ G+V  WG  G G+LG G +  ++          S Y       L
Sbjct: 182 KMVALGSEHSIATTEEGEVLSWGAAGAGRLGHGHKTSILG----FSITTSEYTPRLIKNL 237

Query: 284 SRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                          G  +K IA G  HSA I + G L  F  G   + G G + DEL P
Sbjct: 238 D--------------GVKIKRIAAGMLHSACIDEKGTLFIF--GQKTEKGFGRSGDELRP 281

Query: 344 NCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSL 403
             V  +     E VA G +HT  ++  GD+Y++G N+ G LG GG      P +L + SL
Sbjct: 282 TVVEEV--PFSEEVACGGYHTCVVTDSGDLYSWGSNENGCLGLGGTDMVRSPEVLKS-SL 338

Query: 404 ENVHSKSVSCGARHTAVIADDGKVFCWGW------------NKYGQLGLGDVIDRNIPSQ 451
                  VSCG +HTAVI+  G ++ WGW            +  GQLG G+ +D   P  
Sbjct: 339 FKFPVSKVSCGWKHTAVIS-GGDIYTWGWGGANGTFFEEGHSSGGQLGHGNDVDYFEPMM 397

Query: 452 VTI-EGCVPRNVACGWWHT 469
           V   +     +V+CG+ HT
Sbjct: 398 VEFGKNARAVHVSCGFNHT 416



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 103/391 (26%), Positives = 159/391 (40%), Gaps = 66/391 (16%)

Query: 50  CGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLP-TEASIVKAAAGWA 108
           CGG     + +++S ++   G  +D GQ  + S     + EP  +   +  +V+ +AG  
Sbjct: 80  CGGA--HTLFLTESGRVFAAG-LNDFGQLGIGSSVTHSL-EPIEVSGFDEKVVEVSAGNH 135

Query: 109 HCVAVTEGGEVYTWGWKEC--VPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVS 166
           H  AVT  G+++ WG      +  G+  G + + T    D        +    S  S  +
Sbjct: 136 HSCAVTADGKLFAWGRNSSGQLGLGKRAGKVVS-TPRKVDCLADSRVKMVALGSEHSIAT 194

Query: 167 RSSGGTSS-GTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIAT 225
              G   S G  G G    G K   +  +  T+E +          P L+    GV+I  
Sbjct: 195 TEEGEVLSWGAAGAGRLGHGHKTSILGFSITTSEYT----------PRLIKNLDGVKIKR 244

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
           +AAG  H+  + + G ++ +G   E   G                        RS    R
Sbjct: 245 IAAGMLHSACIDEKGTLFIFGQKTEKGFG------------------------RSGDELR 280

Query: 286 GSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNC 345
            +V  E P       + + +ACGG H+ V+TD+G L ++G    G  G G TD   SP  
Sbjct: 281 PTVVEEVP-------FSEEVACGGYHTCVVTDSGDLYSWGSNENGCLGLGGTDMVRSPEV 333

Query: 346 V-SSLLGIQIEGVAAGLWHTICISSDGDVYAFG-----GNQF-------GQLGTGGDQAE 392
           + SSL    +  V+ G  HT  IS  GD+Y +G     G  F       GQLG G D   
Sbjct: 334 LKSSLFKFPVSKVSCGWKHTAVISG-GDIYTWGWGGANGTFFEEGHSSGGQLGHGNDVDY 392

Query: 393 TLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
             P +++    +N  +  VSCG  HT  I +
Sbjct: 393 FEPMMVEFG--KNARAVHVSCGFNHTGAIFE 421



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/140 (34%), Positives = 76/140 (54%), Gaps = 6/140 (4%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDELSPNCVSSLLGIQIEGVAAGLWH 363
           +ACGG H+  +T++G +   G   +GQ G GS+    L P  VS      +E V+AG  H
Sbjct: 78  LACGGAHTLFLTESGRVFAAGLNDFGQLGIGSSVTHSLEPIEVSGFDEKVVE-VSAGNHH 136

Query: 364 TICISSDGDVYAFGGNQFGQLGTGGDQAETL--PRLLDAPSLENVHSKSVSCGARHTAVI 421
           +  +++DG ++A+G N  GQLG G    + +  PR +D   L +   K V+ G+ H+   
Sbjct: 137 SCAVTADGKLFAWGRNSSGQLGLGKRAGKVVSTPRKVDC--LADSRVKMVALGSEHSIAT 194

Query: 422 ADDGKVFCWGWNKYGQLGLG 441
            ++G+V  WG    G+LG G
Sbjct: 195 TEEGEVLSWGAAGAGRLGHG 214


>gi|118092565|ref|XP_001231234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Gallus
           gallus]
          Length = 1056

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 113/249 (45%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  HTLAL+D GQV+ WG   +GQLGL      +  P  I             +
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNI------------KS 133

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDEL 341
           LS   +                +ACG  HS  ++    + ++G   YGQ G G     + 
Sbjct: 134 LSEIQIVQ--------------VACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQN 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP+ + SLLGI    +AAG  H+  ++  G ++ +G N+FGQLG   D    +P LL   
Sbjct: 180 SPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLK-- 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL       + CG  HTA +  +G VF +G   YGQLG         P +V  + G +  
Sbjct: 238 SLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSLVT 297

Query: 461 NVACGWWHT 469
            + CG  HT
Sbjct: 298 QITCGRQHT 306



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 98/355 (27%), Positives = 145/355 (40%), Gaps = 75/355 (21%)

Query: 47  RDVCGGGCGF--AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           RDV   GCG    + + D   + T G  +DLGQ  +   K  + PE        +IV  +
Sbjct: 37  RDV---GCGLRHTVFVLDDGTVYTCGC-NDLGQ--LGHEKARKRPEHVGALDAQNIVAVS 90

Query: 105 AGWAHCVAVTEGGEVYTWGW-----------KECVPSGRVFGDLSTGTGLDKDVFERQSS 153
            G AH +A+ + G+VY WG            +EC+   R    LS               
Sbjct: 91  CGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEI------------- 137

Query: 154 FLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPC 213
               Q+   +     S   S G++    G+  +K  ++ L  +  + +S         P 
Sbjct: 138 ----QIVQVACGYYHSLALSKGSEVFSWGQ--NKYGQLGLGYEYKKQNS---------PH 182

Query: 214 LVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES 273
           ++    G+  A +AAGG H+  L+  G ++GWG    GQLGL                  
Sbjct: 183 VIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND---------------- 226

Query: 274 SYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCG 333
               DR       S+ ++          V  I CG  H+A +T  G + TFG G YGQ G
Sbjct: 227 --DNDRYVPTLLKSLRTQK---------VVHICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 334 QGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFGGNQFGQLGTG 387
             ST  E++P  V  L+G  +  +  G  HT   + S G +Y+FG    GQLGTG
Sbjct: 276 HNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTG 330



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/160 (36%), Positives = 81/160 (50%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      L  +I  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G ++A   P  + A   +N+   +VSCG  HT  + D G+V+ WG    GQL
Sbjct: 61  NDLGQL--GHEKARKRPEHVGALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLATDGQL 116

Query: 439 GLGDV-----IDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      VACG++H+L L+
Sbjct: 117 GLPGTEECIRVPRNIKSLSEIQIV---QVACGYYHSLALS 153



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 73/306 (23%), Positives = 125/306 (40%), Gaps = 52/306 (16%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D       + +   +P      +E  IV+ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQV--SPR 162
            G+ H +A+++G EV++WG  +       +G L  G    K    + S  + + +   P 
Sbjct: 144 CGYYHSLALSKGSEVFSWGQNK-------YGQLGLGYEYKK----QNSPHVIKSLLGIPF 192

Query: 163 SQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVR 222
           +Q+  ++GG  S          G  R +              D+N    P L+      +
Sbjct: 193 AQI--AAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDDNDRYVPTLLKSLRTQK 243

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +              
Sbjct: 244 VVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV-------------- 288

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDEL 341
                       F + G+ V  I CG +H +A +  +G + +FG G  GQ G G+T +  
Sbjct: 289 ------------FELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRK 336

Query: 342 SPNCVS 347
           SP  V 
Sbjct: 337 SPFTVK 342


>gi|117558047|gb|AAI27373.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
          Length = 967

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 132/274 (48%), Gaps = 38/274 (13%)

Query: 205 DENLSAFP--CLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMV 262
           DE +   P  C   +N  VR   V  G RHT+ + D G V+  G    GQLG        
Sbjct: 18  DEEVVLEPRRCDFFINKNVR--DVGCGSRHTVFVLDDGTVYTCGCNDLGQLG-------- 67

Query: 263 SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL 322
                       + K R      G+++++          +  ++CG  H+  + D G + 
Sbjct: 68  ------------HDKSRRKPEQVGALDAQ---------IIVAVSCGEAHTLALNDKGQVF 106

Query: 323 TFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
           ++G  +YGQ G  + ++ +  P  + SL  +QI  VA G  H++ +S D D++++G NQ+
Sbjct: 107 SWGHAVYGQIGLSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDIFSWGQNQY 166

Query: 382 GQLGTGGD-QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL 440
           GQLG G + + E  PR +   SL  +    ++ G  H+  +   G +F WG NK+GQLGL
Sbjct: 167 GQLGLGLEIKKECAPRHIK--SLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGL 224

Query: 441 GDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLA 473
            D  DRN+P+ + ++      ++ CG  HT  L 
Sbjct: 225 TDETDRNVPALLKSLRSQKIIHICCGEDHTAALT 258



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/260 (31%), Positives = 119/260 (45%), Gaps = 34/260 (13%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS-----RI-RMVSSPHPIPCIESSYG 276
           I  V+ G  HTLAL+D GQV+ WG+   GQ+GL +     R+ R + S   +  ++ + G
Sbjct: 86  IVAVSCGEAHTLALNDKGQVFSWGHAVYGQIGLSTAEEYIRVPRNIKSLSDVQIVQVACG 145

Query: 277 KDRSAALSRGS---------VNSEGPGFRVPGN----YVKG--------IACGGRHSAVI 315
              S ALS+ S             G G  +       ++K         IA GG HS  +
Sbjct: 146 HHHSLALSKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGGGHSFAL 205

Query: 316 TDAGALLTFGWGL--YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDV 373
           T +GA+  FGWG   +GQ G     D   P  + SL   +I  +  G  HT  ++ +G V
Sbjct: 206 TISGAI--FGWGRNKFGQLGLTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKEGGV 263

Query: 374 YAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGW 432
           + FG   +GQLG      E  PR      L       ++CG +HT A +   G+++ +G 
Sbjct: 264 FTFGAGGYGQLGHNSTNHEVNPR--KVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGL 321

Query: 433 NKYGQLGLGDVIDRNIPSQV 452
              GQLG G  I+R  P  V
Sbjct: 322 GGNGQLGTGSTINRKSPFTV 341



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 99/355 (27%), Positives = 148/355 (41%), Gaps = 55/355 (15%)

Query: 37  RLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPT 96
           R    +    RDV G G    + + D   + T G  +DLGQ  +   K    PE      
Sbjct: 27  RCDFFINKNVRDV-GCGSRHTVFVLDDGTVYTCGC-NDLGQ--LGHDKSRRKPEQVGALD 82

Query: 97  EASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLT 156
              IV  + G AH +A+ + G+V++WG         V+G +   T  +     R    L+
Sbjct: 83  AQIIVAVSCGEAHTLALNDKGQVFSWGHA-------VYGQIGLSTAEEYIRVPRNIKSLS 135

Query: 157 E-QVSPRSQVSRSSGGTSSGTD--GRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPC 213
           + Q+   +     S   S  +D    G  + G     + + K+ A             P 
Sbjct: 136 DVQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIKKECA-------------PR 182

Query: 214 LVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES 273
            +    G+  A +AAGG H+ AL+  G ++GWG    GQLGL                  
Sbjct: 183 HIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLTDE--------------- 227

Query: 274 SYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCG 333
               DR+      S+ S+          +  I CG  H+A +T  G + TFG G YGQ G
Sbjct: 228 ---TDRNVPALLKSLRSQK---------IIHICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 334 QGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFGGNQFGQLGTG 387
             ST+ E++P  V  L+G  +  +A G  HT+  + S G +Y+FG    GQLGTG
Sbjct: 276 HNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTG 330



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 55/160 (34%), Positives = 77/160 (48%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      +   +  V  G  HT+ +  DG VY  G 
Sbjct: 1   MLCWGNTSFGQLGLGGIDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G D++   P  + A   + +   +VSCG  HT  + D G+VF WG   YGQ+
Sbjct: 61  NDLGQL--GHDKSRRKPEQVGALDAQII--VAVSCGEAHTLALNDKGQVFSWGHAVYGQI 116

Query: 439 GLGDV-----IDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   ++      VACG  H+L L+
Sbjct: 117 GLSTAEEYIRVPRNIKSLSDVQIV---QVACGHHHSLALS 153


>gi|302565090|ref|NP_001180861.1| RCC1 domain-containing protein 1 [Macaca mulatta]
          Length = 376

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 116/246 (47%), Gaps = 45/246 (18%)

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFR--VPGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
           E+  G+      +R  V+   P +R   P    + +  G  H+ ++  AG + ++G G +
Sbjct: 128 EAQIGRLPLLPCARAYVSPRPPFYRPLAPQLRARQLELGAEHALLLDAAGQVFSWGGGRH 187

Query: 330 GQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLG---- 385
           GQ G G+ + EL P  + +L G+ +  VAAG WH++C+S  GD+Y +G N+ GQL     
Sbjct: 188 GQLGHGTLEAELEPRLLEALQGLTMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTR 247

Query: 386 -------------TGGDQ---------------------AETLPRLLDAPSLENVHSKSV 411
                        TG ++                      +  P LLD P   +  +  V
Sbjct: 248 NLAEDGETVAREATGLNEDGSQVKRTGRVEDGAPAPFIAVQPFPALLDLPLGSD--AVKV 305

Query: 412 SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI---EGCVPRNVACGWWH 468
           SCG+RHTAV+   G+++ WGW KYGQLG  D    + P +V     +    + V CG W+
Sbjct: 306 SCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDWPRRVEYFVDKQLQVKTVTCGPWN 365

Query: 469 TLLLAV 474
           T + AV
Sbjct: 366 TYVYAV 371



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 80/173 (46%), Gaps = 15/173 (8%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P L+    G+ +A VAAGG H++ +S+ G ++ WG+   GQL L +R  +      +   
Sbjct: 201 PRLLEALQGLTMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTR-NLAEDGETVARE 259

Query: 272 ESSYGKDRSAALSRGSVNSEGPG-----------FRVP-GNYVKGIACGGRHSAVITDAG 319
            +   +D S     G V    P              +P G+    ++CG RH+AV+T  G
Sbjct: 260 ATGLNEDGSQVKRTGRVEDGAPAPFIAVQPFPALLDLPLGSDAVKVSCGSRHTAVVTRTG 319

Query: 320 ALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG--IQIEGVAAGLWHTICISSD 370
            L T+GWG YGQ G   T     P  V   +   +Q++ V  G W+T   + +
Sbjct: 320 ELYTWGWGKYGQLGHEDTTSLDWPRRVEYFVDKQLQVKTVTCGPWNTYVYAVE 372



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 87/207 (42%), Gaps = 44/207 (21%)

Query: 53  GCGFAMAISDSRKLITWG--STDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
           G   A+ +  + ++ +WG      LG   + +     + E     T A +  AA GW H 
Sbjct: 166 GAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLTMAEV--AAGGW-HS 222

Query: 111 VAVTEGGEVYTWGWKECVPSGRVFGDLSTGT---GLDKDVFERQSSFLTEQVSPRSQVSR 167
           V V+E G++Y WGW E        G L+  T     D +   R+++ L E     SQV R
Sbjct: 223 VCVSETGDIYIWGWNES-------GQLALPTRNLAEDGETVAREATGLNED---GSQVKR 272

Query: 168 SSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVA 227
           +           G  E+G+    I++                 FP L+ L  G     V+
Sbjct: 273 T-----------GRVEDGAPAPFIAV---------------QPFPALLDLPLGSDAVKVS 306

Query: 228 AGGRHTLALSDIGQVWGWGYGGEGQLG 254
            G RHT  ++  G+++ WG+G  GQLG
Sbjct: 307 CGSRHTAVVTRTGELYTWGWGKYGQLG 333


>gi|145594878|ref|YP_001159175.1| cell wall anchor domain-containing protein [Salinispora tropica
           CNB-440]
 gi|145304215|gb|ABP54797.1| LPXTG-motif cell wall anchor domain [Salinispora tropica CNB-440]
          Length = 551

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 86/268 (32%), Positives = 116/268 (43%), Gaps = 34/268 (12%)

Query: 203 SGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMV 262
           +G    S  P  V L  G  +  +A    H+LAL+ +G V  WG    GQLG G+     
Sbjct: 70  NGTTASSRTPVPVRLPVGTTVTAIAGSDTHSLALTSVGTVLAWGGNSFGQLGDGT---TA 126

Query: 263 SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVP-GNYVKGIACGGRHSAVITDAGAL 321
           SS  P+P                          R+P G  V  IA G  HS  IT  GA+
Sbjct: 127 SSRTPVP-------------------------VRLPVGTTVTAIAAGTSHSLAITATGAV 161

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             +G    GQ G G+T D   P  V   +G  +  +A GL H++ ++S G   A+G N F
Sbjct: 162 FAWGDNAVGQLGDGTTTDSSLPVPVRLPVGTTVTAIAGGLGHSLAVASTGATLAWGSNAF 221

Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
           GQLG G     + P  +  P L  V   +V+ G  H+  +   G V+ WG N +GQLG G
Sbjct: 222 GQLGDGTTTGSSTP--ITVPQLPTV--TAVAAGDVHSLALTSTGTVYAWGANSFGQLGDG 277

Query: 442 DVIDRNIPSQVTI-EGCVPRNVACGWWH 468
              D + P  V +  G     V  G  H
Sbjct: 278 STSDSSTPIAVRVPAGTTATAVVSGADH 305



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 100/409 (24%), Positives = 151/409 (36%), Gaps = 52/409 (12%)

Query: 65  KLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGW 124
            ++ WG  +  GQ    +      P P  LP   ++   A    H +A+T  G V  WG 
Sbjct: 56  TILAWGD-NSFGQFGNGTTASSRTPVPVRLPVGTTVTAIAGSDTHSLALTSVGTVLAWG- 113

Query: 125 KECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEE 184
                 G  FG L  GT           + +  ++   + V+  + GTS       +G  
Sbjct: 114 ------GNSFGQLGDGT------TASSRTPVPVRLPVGTTVTAIAAGTSHSLAITATGAV 161

Query: 185 GSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWG 244
                  +           G    S+ P  V L  G  +  +A G  H+LA++  G    
Sbjct: 162 ------FAWGDNAVGQLGDGTTTDSSLPVPVRLPVGTTVTAIAGGLGHSLAVASTGATLA 215

Query: 245 WGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKG 304
           WG    GQLG G+     S+P  +P + +                            V  
Sbjct: 216 WGSNAFGQLGDGTTTGS-STPITVPQLPT----------------------------VTA 246

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           +A G  HS  +T  G +  +G   +GQ G GST D  +P  V    G     V +G  H+
Sbjct: 247 VAAGDVHSLALTSTGTVYAWGANSFGQLGDGSTSDSSTPIAVRVPAGTTATAVVSGADHS 306

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           + +++ G   A+G N  GQLG G     + P  +  P    +   +V+    H   +   
Sbjct: 307 LALTAAGGALAWGDNGQGQLGNGATVGSSTPVAVRVPGGATL--TAVAIHRDHAVAVTST 364

Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACGWWHTLLL 472
                W  N  GQLG G   D + P  V++  G     VA G  H+L L
Sbjct: 365 ATALAWSRNNEGQLGNGTTTDSSEPVAVSLPAGTAITAVAVGDDHSLAL 413



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 81/163 (49%), Gaps = 5/163 (3%)

Query: 312 SAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDG 371
           +AV TD   +L +G   +GQ G G+T    +P  V   +G  +  +A    H++ ++S G
Sbjct: 50  AAVATDT--ILAWGDNSFGQFGNGTTASSRTPVPVRLPVGTTVTAIAGSDTHSLALTSVG 107

Query: 372 DVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWG 431
            V A+GGN FGQLG G   +   P  +  P    V   +++ G  H+  I   G VF WG
Sbjct: 108 TVLAWGGNSFGQLGDGTTASSRTPVPVRLPVGTTV--TAIAAGTSHSLAITATGAVFAWG 165

Query: 432 WNKYGQLGLGDVIDRNIPSQVTIE-GCVPRNVACGWWHTLLLA 473
            N  GQLG G   D ++P  V +  G     +A G  H+L +A
Sbjct: 166 DNAVGQLGDGTTTDSSLPVPVRLPVGTTVTAIAGGLGHSLAVA 208



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 85/340 (25%), Positives = 126/340 (37%), Gaps = 60/340 (17%)

Query: 32  SPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEP 91
           +P+ VRLP  VG+    +  G    ++AI+ +  +  WG  + +GQ    +     +P P
Sbjct: 130 TPVPVRLP--VGTTVTAIAAG-TSHSLAITATGAVFAWGD-NAVGQLGDGTTTDSSLPVP 185

Query: 92  FPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGT--GLDKDVFE 149
             LP   ++   A G  H +AV   G    WG          FG L  GT  G    +  
Sbjct: 186 VRLPVGTTVTAIAGGLGHSLAVASTGATLAWG-------SNAFGQLGDGTTTGSSTPITV 238

Query: 150 RQSSFLTEQVS-PRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENL 208
            Q   +T   +     ++ +S GT         G+ G                  G  + 
Sbjct: 239 PQLPTVTAVAAGDVHSLALTSTGTVYAWGANSFGQLGD-----------------GSTSD 281

Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
           S+ P  V +  G     V +G  H+LAL+  G    WG  G+GQLG G+    V S  P+
Sbjct: 282 SSTPIAVRVPAGTTATAVVSGADHSLALTAAGGALAWGDNGQGQLGNGA---TVGSSTPV 338

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFRVPGN-YVKGIACGGRHSAVITDAGALLTFGWG 327
                                      RVPG   +  +A    H+  +T     L +   
Sbjct: 339 -------------------------AVRVPGGATLTAVAIHRDHAVAVTSTATALAWSRN 373

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI 367
             GQ G G+T D   P  VS   G  I  VA G  H++ +
Sbjct: 374 NEGQLGNGTTTDSSEPVAVSLPAGTAITAVAVGDDHSLAL 413


>gi|390336982|ref|XP_795107.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Strongylocentrotus purpuratus]
          Length = 1391

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 90/265 (33%), Positives = 127/265 (47%), Gaps = 32/265 (12%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHP-IPC 270
           P  V+    V I  VA G  HTLA+SD GQV GWG    GQ GL +   + + P P I  
Sbjct: 78  PVQVSALETVVIKHVACGDDHTLAVSDRGQVLGWGRNDRGQCGLATG-DIENKPRPRILK 136

Query: 271 IESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
             +SY                         +VK + CG  HS  +T  G L ++G   YG
Sbjct: 137 HLASY------------------------QFVK-VCCGSLHSMALTRDGRLFSWGDNTYG 171

Query: 331 QCGQGS--TDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGG 388
           Q G G+  T+    P  ++SL G+ +  VA G +H+  ++  G V+ +G N  GQLG G 
Sbjct: 172 QLGIGTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTISGSVFGWGKNDVGQLGLGN 231

Query: 389 DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNI 448
            + +  P LL   ++ +   K ++CG  HTA++  DG VF +G    GQLG G   +   
Sbjct: 232 KENKAYPTLLR--NMRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQLGHGSNYNEVN 289

Query: 449 PSQVT-IEGCVPRNVACGWWHTLLL 472
           P +V  + G     V CG  HTL+L
Sbjct: 290 PRKVIDLMGSDITQVTCGKHHTLVL 314



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/262 (27%), Positives = 120/262 (45%), Gaps = 32/262 (12%)

Query: 215 VTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESS 274
           VT   G R+ +++ G  HT  + D G ++  G   +GQLG   + R    P  +  +E+ 
Sbjct: 31  VTTLSGQRVQSISCGKHHTGIVLDDGTLYMCGANSKGQLG---QDRNQYKPVQVSALETV 87

Query: 275 YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCG- 333
                                      +K +ACG  H+  ++D G +L +G    GQCG 
Sbjct: 88  --------------------------VIKHVACGDDHTLAVSDRGQVLGWGRNDRGQCGL 121

Query: 334 -QGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAE 392
             G  +++  P  +  L   Q   V  G  H++ ++ DG ++++G N +GQLG G     
Sbjct: 122 ATGDIENKPRPRILKHLASYQFVKVCCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTN 181

Query: 393 TLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
              R  +  SL  V    V+CG  H+  +   G VF WG N  GQLGLG+  ++  P+ +
Sbjct: 182 YTDRPTELTSLRGVPLVRVACGGFHSFALTISGSVFGWGKNDVGQLGLGNKENKAYPTLL 241

Query: 453 -TIEGCVPRNVACGWWHTLLLA 473
             +   + +++ACG  HT +L 
Sbjct: 242 RNMRSQMVKHIACGQDHTAMLT 263



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 63/183 (34%), Positives = 93/183 (50%), Gaps = 9/183 (4%)

Query: 297 VPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG 356
           + G  V+ I+CG  H+ ++ D G L   G    GQ GQ    ++  P  VS+L  + I+ 
Sbjct: 34  LSGQRVQSISCGKHHTGIVLDDGTLYMCGANSKGQLGQDR--NQYKPVQVSALETVVIKH 91

Query: 357 VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR 416
           VA G  HT+ +S  G V  +G N  GQ G      E  PR      L +     V CG+ 
Sbjct: 92  VACGDDHTLAVSDRGQVLGWGRNDRGQCGLATGDIENKPRPRILKHLASYQFVKVCCGSL 151

Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVI----DRNIPSQVT-IEGCVPRNVACGWWHTLL 471
           H+  +  DG++F WG N YGQLG+G ++    DR  P+++T + G     VACG +H+  
Sbjct: 152 HSMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDR--PTELTSLRGVPLVRVACGGFHSFA 209

Query: 472 LAV 474
           L +
Sbjct: 210 LTI 212



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 126/479 (26%), Positives = 193/479 (40%), Gaps = 86/479 (17%)

Query: 57  AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEAS--IVKAAAGWAHCVAVT 114
            +A+SD  +++ WG  +D GQ  + +G     P P  L   AS   VK   G  H +A+T
Sbjct: 99  TLAVSDRGQVLGWGR-NDRGQCGLATGDIENKPRPRILKHLASYQFVKVCCGSLHSMALT 157

Query: 115 EGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVS----RSSG 170
             G +++WG          +G L  GT L  +  +R +   + +  P  +V+     S  
Sbjct: 158 RDGRLFSWG-------DNTYGQLGIGT-LVTNYTDRPTELTSLRGVPLVRVACGGFHSFA 209

Query: 171 GTSSGT-DGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAG 229
            T SG+  G G  + G    ++ L          G++   A+P L+       +  +A G
Sbjct: 210 LTISGSVFGWGKNDVG----QLGL----------GNKENKAYPTLLRNMRSQMVKHIACG 255

Query: 230 GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI-----ESSYGKDRSAAL- 283
             HT  L+  G V+ +G G EGQLG GS    V+    I  +     + + GK  +  L 
Sbjct: 256 QDHTAMLTADGGVFLFGQGSEGQLGHGSNYNEVNPRKVIDLMGSDITQVTCGKHHTLVLE 315

Query: 284 -SRGSVNSEGPGF----------------RVPG----------------NYVKGIACGGR 310
            S+G + + G G                 RVPG                  V+ I  GG 
Sbjct: 316 GSKGRLYAFGQGIHGQLGQDEARSCSNPQRVPGPWVPHSSTEKNSSSKGRVVRCIYAGGH 375

Query: 311 H-----SAVITDAGALLTF---GWGLYGQC--GQGSTDDELSPNCVSSLLGIQIEGVAAG 360
           H     +    D    L F      ++ Q                   L  + I+ VA G
Sbjct: 376 HCFSTATNAADDIQIKLLFRDISTRIFFQLTXXXXXXXXXXXXXXXXXLETVVIKHVACG 435

Query: 361 LWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
             HT+ +S    V  +G N  GQ G      E  PR      L +     V CG+ H+  
Sbjct: 436 DDHTLAVSDRVQVLGWGRNDRGQCGLATGDIENKPRPRILRHLASYQFVKVCCGSLHSMA 495

Query: 421 IADDGKVFCWGWNKYGQLGLGDVI----DRNIPSQVT-IEGCVPRNVACGWWHTLLLAV 474
           +  DG++F WG N YGQLG+G ++    DR  P+++T + G     VACG +H+  L +
Sbjct: 496 LTRDGRLFSWGDNTYGQLGIGTLVTNYTDR--PTELTSLRGVPLVRVACGGFHSFALTI 552



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 91/175 (52%), Gaps = 3/175 (1%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCG--QGSTDDELSPNCVSSLLGIQIEGVAA 359
           +K +ACG  H+  ++D   +L +G    GQCG   G  +++  P  +  L   Q   V  
Sbjct: 429 IKHVACGDDHTLAVSDRVQVLGWGRNDRGQCGLATGDIENKPRPRILRHLASYQFVKVCC 488

Query: 360 GLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
           G  H++ ++ DG ++++G N +GQLG G        R  +  SL  V    V+CG  H+ 
Sbjct: 489 GSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVACGGFHSF 548

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLA 473
            +   G VF WG N  GQLGLG+  +++ P+ +  +   + +++ACG  HT +L 
Sbjct: 549 ALTISGSVFGWGKNDVGQLGLGNKENKSYPTLLRNMRSQMVKHIACGQDHTAMLT 603



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 122/265 (46%), Gaps = 38/265 (14%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS-------RIRMVSSPHPIPCIES 273
           V I  VA G  HTLA+SD  QV GWG    GQ GL +       R R++        ++ 
Sbjct: 427 VVIKHVACGDDHTLAVSDRVQVLGWGRNDRGQCGLATGDIENKPRPRILRHLASYQFVKV 486

Query: 274 SYGKDRSAALSR---------GSVNSEGPGFRVPGNY---------VKGI-----ACGGR 310
             G   S AL+R          +    G G  V  NY         ++G+     ACGG 
Sbjct: 487 CCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVT-NYTDRPTELTSLRGVPLVRVACGGF 545

Query: 311 HSAVITDAGALLTFGWGL--YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICIS 368
           HS  +T +G++  FGWG    GQ G G+ +++  P  + ++    ++ +A G  HT  ++
Sbjct: 546 HSFALTISGSV--FGWGKNDVGQLGLGNKENKSYPTLLRNMRSQMVKHIACGQDHTAMLT 603

Query: 369 SDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIA-DDGKV 427
           +DG V+ FG    GQLG G +  E  PR      L       V+CG  HT V+    G++
Sbjct: 604 ADGGVFLFGQGSEGQLGHGSNYNEVNPR--KVIDLMGSDITQVTCGKHHTLVLEGSKGRL 661

Query: 428 FCWGWNKYGQLGLGDVIDRNIPSQV 452
           + +G   +GQLG  +    + P +V
Sbjct: 662 YAFGQGIHGQLGQDEARSCSNPQRV 686



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 65/196 (33%), Positives = 95/196 (48%), Gaps = 28/196 (14%)

Query: 207 NLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPH 266
           N +  P  +T   GV +  VA GG H+ AL+  G V+GWG    GQLGLG++        
Sbjct: 521 NYTDRPTELTSLRGVPLVRVACGGFHSFALTISGSVFGWGKNDVGQLGLGNK-------- 572

Query: 267 PIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGW 326
                     +++S      ++ S+          VK IACG  H+A++T  G +  FG 
Sbjct: 573 ----------ENKSYPTLLRNMRSQ---------MVKHIACGQDHTAMLTADGGVFLFGQ 613

Query: 327 GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICIS-SDGDVYAFGGNQFGQLG 385
           G  GQ G GS  +E++P  V  L+G  I  V  G  HT+ +  S G +YAFG    GQLG
Sbjct: 614 GSEGQLGHGSNYNEVNPRKVIDLMGSDITQVTCGKHHTLVLEGSKGRLYAFGQGIHGQLG 673

Query: 386 TGGDQAETLPRLLDAP 401
               ++ + P+ +  P
Sbjct: 674 QDEARSCSNPQRVPGP 689



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 12/161 (7%)

Query: 321 LLTFGWG--LYGQCGQGSTDDELSPNC---VSSLLGIQIEGVAAGLWHTICISSDGDVYA 375
           + TF WG  + GQ G G T  + +      V++L G +++ ++ G  HT  +  DG +Y 
Sbjct: 1   MATFCWGSSMEGQLGIGITGGQTTQEVAKEVTTLSGQRVQSISCGKHHTGIVLDDGTLYM 60

Query: 376 FGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKY 435
            G N  GQLG   +Q +     +   +LE V  K V+CG  HT  ++D G+V  WG N  
Sbjct: 61  CGANSKGQLGQDRNQYKP----VQVSALETVVIKHVACGDDHTLAVSDRGQVLGWGRNDR 116

Query: 436 GQLGL--GDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLA 473
           GQ GL  GD+ ++  P  +  +       V CG  H++ L 
Sbjct: 117 GQCGLATGDIENKPRPRILKHLASYQFVKVCCGSLHSMALT 157


>gi|149574281|ref|XP_001514757.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1
            [Ornithorhynchus anatinus]
          Length = 4866

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/298 (29%), Positives = 129/298 (43%), Gaps = 79/298 (26%)

Query: 232  HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
            H++AL++ G+V+ WG G  G+LG G+  R    P  I  ++                   
Sbjct: 4098 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQ------------------- 4137

Query: 292  GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                   G  V  ++CG +HSAV+T  G + TFG G YG+ G G+T ++  P  V++L G
Sbjct: 4138 -------GEEVVQMSCGFKHSAVVTADGKMFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4190

Query: 352  IQIEGVAAGLWHTICISSDGD-VYAFGGNQFGQLGTGGDQAETLPRLLDA---------- 400
             QI  VA GL HT+ +S+DG  V+AFG   +G+LG G   A++ P+ +D           
Sbjct: 4191 YQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVA 4250

Query: 401  ----------------------------------------PSLENVHSKSVSCGARHTAV 420
                                                    P L  V  + V+ GA HT  
Sbjct: 4251 CGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLA 4310

Query: 421  IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACGWWHTLLLAVPPT 477
            I   G V+ WG N  GQLGLG       P+ +T+ +G   R ++ G  H+     PP 
Sbjct: 4311 ITSTGDVYAWGSNSEGQLGLGHTNHVREPTLITVLQGKNIRQISAGRCHSAAWTAPPV 4368



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 105/200 (52%), Gaps = 6/200 (3%)

Query: 275  YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
            +G  R   L+    N   P      +  + + CG   + VI   G +L  G G YG+ GQ
Sbjct: 4007 WGAGRHGQLAEAGRNVMIPAGAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQ 4066

Query: 335  GSTDDELSPNCVSSLLGIQIEGVAAGLW---HTICISSDGDVYAFGGNQFGQLGTGGDQA 391
            G++DD      +S+L G  +  +        H++ ++  G+V+++G   +G+LG G    
Sbjct: 4067 GNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDR 4126

Query: 392  ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
            +  PR ++A   E V    +SCG +H+AV+  DGK+F +G   YG+LGLG+  ++ +P +
Sbjct: 4127 QRRPRQIEALQGEEV--VQMSCGFKHSAVVTADGKMFTFGNGDYGRLGLGNTSNKKLPER 4184

Query: 452  VT-IEGCVPRNVACGWWHTL 470
            VT +EG     VACG  HTL
Sbjct: 4185 VTALEGYQIGQVACGLNHTL 4204



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 112/395 (28%), Positives = 161/395 (40%), Gaps = 79/395 (20%)

Query: 41   TVGSAWRDVCGGGCGFAMAISD--------SRKLITWGSTDDLGQSYVTSGKHGEIPEPF 92
            +   A + +CG  C F +  +         S   +  G++DDL    V S   G +    
Sbjct: 4030 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVV--- 4086

Query: 93   PLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQS 152
                   +V +     H +A+TE GEV++WG  +       +G L  G   D+    RQ 
Sbjct: 4087 -----TQLVTSCGSDGHSMALTESGEVFSWGDGD-------YGKLGHGNS-DRQRRPRQ- 4132

Query: 153  SFLTEQVSPRSQVSRSSGGTSSGT---DGR----GSGEEGSKRRRISLAKQTAESSSSGD 205
                E +     V  S G   S     DG+    G+G+ G    R+ L          G+
Sbjct: 4133 ---IEALQGEEVVQMSCGFKHSAVVTADGKMFTFGNGDYG----RLGL----------GN 4175

Query: 206  ENLSAFPCLVTLNPGVRIATVAAGGRHTLALS-DIGQVWGWGYGGEGQLGLGSRIRMVSS 264
             +    P  VT   G +I  VA G  HTLA+S D   VW +G G  G+LGLG+     SS
Sbjct: 4176 TSNKKLPERVTALEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNSTAK-SS 4234

Query: 265  PHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTF 324
            P  +  +                           G  +K +ACG + S  +T  G + TF
Sbjct: 4235 PQKVDVL--------------------------CGIGIKKVACGTQFSVALTKDGHVYTF 4268

Query: 325  GWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQL 384
            G        +G   +   P  V  L G+ IE VA G  HT+ I+S GDVYA+G N  GQL
Sbjct: 4269 GQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLAITSTGDVYAWGSNSEGQL 4328

Query: 385  GTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            G G       P L+     +N+  + +S G  H+A
Sbjct: 4329 GLGHTNHVREPTLITVLQGKNI--RQISAGRCHSA 4361



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 95/174 (54%), Gaps = 5/174 (2%)

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
           + I  G   + VI+  G++   G G YG+ G G ++++ +   ++      I+ V++   
Sbjct: 406 QTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKG 465

Query: 363 ---HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
              HT+  +++G+V+++G   +G+LG G    +  P+L+  P L+      VS G RH+A
Sbjct: 466 SDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCVSAGYRHSA 524

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
            + +DG+++ WG   +G+LG GD   RNIP+ V     V   V+CG  HT+ L+
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG-EVSCGSSHTIALS 577



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 132/298 (44%), Gaps = 35/298 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAG---GRHTLALSDIGQVWGWGYGGEGQLGLGSRI- 259
           GD N  +    +T  P   I  V++      HTLA +  G+V+ WG G  G+LG G+   
Sbjct: 438 GDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSST 497

Query: 260 ----RMVSSP---HPIPCIESSY---------------GKDRSAALSRGSVNSEG-PGFR 296
               +++  P     + C+ + Y               G+     L  G  NS   P   
Sbjct: 498 QKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557

Query: 297 VPGNYVKGIACGGRHSAVITDAGALL-TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
              + V  ++CG  H+  ++  G  + +FG G  G+ G G T+    P  + +L G+ I 
Sbjct: 558 KDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIR 617

Query: 356 GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL-PRLLDAPSLENVHSKSVSCG 414
            V AG   ++ ++S G VYA+G      LG G  +A  L P+L++   L       +S G
Sbjct: 618 KVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLVE--ELAATRIVDISIG 673

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVI-DRNIPSQVT-IEGCVPRNVACGWWHTL 470
             H   ++ D +V+ WG N  GQ G G+       P +V+ ++G   + ++ G  H+L
Sbjct: 674 DSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAGTSHSL 731



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 112/251 (44%), Gaps = 31/251 (12%)

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
           T+ AG   T  +S  G V   G G  G+LGLG       S +     + ++   RS    
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLG------DSNNQSTLKKLTFEPHRSIKKV 460

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN 344
             S  S+G                  H+   T  G + ++G G YG+ G G++  +  P 
Sbjct: 461 SSSKGSDG------------------HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPK 502

Query: 345 CVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSL 403
            +   L G  +  V+AG  H+  ++ DG++Y +G   FG+LG G   +  +P L+    +
Sbjct: 503 LIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK--DI 560

Query: 404 ENVHSKSVSCGARHTAVIADDGK-VFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRN 461
            NV    VSCG+ HT  ++ DG+ V+ +G    G+LG GD      P  +  ++G   R 
Sbjct: 561 SNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK 618

Query: 462 VACGWWHTLLL 472
           V  G   +L L
Sbjct: 619 VCAGSQSSLAL 629



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 88/324 (27%), Positives = 132/324 (40%), Gaps = 67/324 (20%)

Query: 52  GGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVK-AAAGWA 108
           G  G  +A +   ++ +WG  D   LG    ++ K+   P+    P +  +V   +AG+ 
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY---PKLIQGPLQGKVVVCVSAGYR 521

Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRS 168
           H  AVTE GE+YTWG  +       FG L  G     D   R    L + +S   +VS  
Sbjct: 522 HSAAVTEDGELYTWGEGD-------FGRLGHG-----DSNSRNIPTLVKDISNVGEVSCG 569

Query: 169 SGGTSS-GTDGR-----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVR 222
           S  T +   DGR     G G+ G                  GD N    P ++    G+ 
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKL--------------GHGDTNRVYKPKVIEALQGMF 615

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V AG + +LAL+  GQV+ WG G    LG GS                       A 
Sbjct: 616 IRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGS---------------------SEAT 652

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
             R  +  E    R     +  I+ G  H   ++    +  +G    GQCGQG++   ++
Sbjct: 653 ALRPKLVEELAATR-----IVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPIT 707

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTI 365
            P  VS L G+ I+ ++AG  H++
Sbjct: 708 KPKKVSGLDGVAIQQISAGTSHSL 731



 Score = 45.8 bits (107), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 4/92 (4%)

Query: 364 TICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
           T  +S   +VY +G N   QL  G  +    P+L  APS  +  ++++  G   T VI+ 
Sbjct: 365 TPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKL--APSFSD--AQTIEAGQYCTFVIST 420

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
           DG V   G   YG+LGLGD  +++   ++T E
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFE 452


>gi|47212900|emb|CAF90790.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 2131

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 86/265 (32%), Positives = 137/265 (51%), Gaps = 32/265 (12%)

Query: 232  HTLALSDIGQVWGWGYGGEGQLGLGS-----RIRMVSSPHPIPCIESSYGKDRSAALSRG 286
            H++AL++ G+V+ WG G  G+LG G+     R R + +      ++   G+   A L R 
Sbjct: 1218 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQVGRGRAAGAGLCR- 1276

Query: 287  SVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCV 346
                     R   +    ++CG +HSAV+T  G L TFG G YG+ G G+T ++  P  V
Sbjct: 1277 --------CRSHLHLRLQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERV 1328

Query: 347  SSLLGIQI---EGVAAGLWHTICISSDG-DVYAFGGNQFGQLGTGGDQAETLPR----LL 398
            ++L G QI     VA GL HT+ +S+DG  V+AFG   +G+LG G   A++ P+    +L
Sbjct: 1329 AALEGYQIGQVANVACGLNHTLVVSADGMMVWAFGDGDYGKLGLGNSTAKSSPQVWAVIL 1388

Query: 399  DAPSLEN---------VHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIP 449
             +P+L           +  K V+CG + +  +  DG+VF +G ++   L      + N P
Sbjct: 1389 QSPTLCQELKVDVLCGISIKKVACGTQFSVALTKDGRVFTFGQDRLIGLPESRARNHNRP 1448

Query: 450  SQV-TIEGCVPRNVACGWWHTLLLA 473
             Q+  + G   ++VA G  HTL L+
Sbjct: 1449 QQLPALSGVHVQDVAVGAEHTLALS 1473



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 118/456 (25%), Positives = 188/456 (41%), Gaps = 111/456 (24%)

Query: 41   TVGSAWRDVCGGGCGFAMAISD--------SRKLITWGSTDDLGQSYVTSGKHGEIPEPF 92
            +   A + VCG  C F +  +         S   +  G++DDL    V S   G +    
Sbjct: 1150 SFSQAQQVVCGQNCTFVIQPNGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFV---- 1205

Query: 93   PLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQS 152
                   +V +     H +A+TE GEV++WG  +       +G L  G   D+    RQ 
Sbjct: 1206 ----VTQLVTSCGSDGHSMALTESGEVFSWGDGD-------YGKLGHGNS-DRQRRPRQI 1253

Query: 153  SFLT-EQVSPRSQVSRSSGGTSSGTDGRGSGEEGSK-RRRISLAKQTAESSSSGDENLSA 210
              L  E+V    QV R          GR +G    + R  + L  Q              
Sbjct: 1254 EALQGEEVV---QVGR----------GRAAGAGLCRCRSHLHLRLQ-------------- 1286

Query: 211  FPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPC 270
                           ++ G +H+  ++  G+++ +G G  G+LGLG+     +S   +P 
Sbjct: 1287 ---------------MSCGFKHSAVVTADGKLFTFGNGDYGRLGLGN-----TSNKKLP- 1325

Query: 271  IESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL-TFGWGLY 329
                   +R AAL          G+++    V  +ACG  H+ V++  G ++  FG G Y
Sbjct: 1326 -------ERVAALE---------GYQI--GQVANVACGLNHTLVVSADGMMVWAFGDGDY 1367

Query: 330  GQCGQGSTDDELSPNC---------------VSSLLGIQIEGVAAGLWHTICISSDGDVY 374
            G+ G G++  + SP                 V  L GI I+ VA G   ++ ++ DG V+
Sbjct: 1368 GKLGLGNSTAKSSPQVWAVILQSPTLCQELKVDVLCGISIKKVACGTQFSVALTKDGRVF 1427

Query: 375  AFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNK 434
             FG ++   +G    +A    R    P+L  VH + V+ GA HT  ++  G V+ WG N 
Sbjct: 1428 TFGQDRL--IGLPESRARNHNRPQQLPALSGVHVQDVAVGAEHTLALSSTGDVYAWGSNS 1485

Query: 435  YGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHT 469
             GQLGLG       P+ VT ++G     V+ G  H+
Sbjct: 1486 EGQLGLGHTNHVREPTVVTMLQGKHIHQVSAGRCHS 1521



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 110/227 (48%), Gaps = 28/227 (12%)

Query: 275  YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
            +G  R   L+    N   P      +  + + CG   + VI   G +L  G G YG+ GQ
Sbjct: 1127 WGAGRHGQLAEAGRNILVPTTAPSFSQAQQVVCGQNCTFVIQPNGTVLACGEGSYGRLGQ 1186

Query: 335  GSTDDELSPNCVSSLLGIQIEGVAAGL---WHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
            G++DD      +S+L G  +  +        H++ ++  G+V+++G   +G+LG G    
Sbjct: 1187 GNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDR 1246

Query: 392  ETLPRLLDAPSLENV--------------------HSK-SVSCGARHTAVIADDGKVFCW 430
            +  PR ++A   E V                    H +  +SCG +H+AV+  DGK+F +
Sbjct: 1247 QRRPRQIEALQGEEVVQVGRGRAAGAGLCRCRSHLHLRLQMSCGFKHSAVVTADGKLFTF 1306

Query: 431  GWNKYGQLGLGDVIDRNIPSQV-TIEGC---VPRNVACGWWHTLLLA 473
            G   YG+LGLG+  ++ +P +V  +EG       NVACG  HTL+++
Sbjct: 1307 GNGDYGRLGLGNTSNKKLPERVAALEGYQIGQVANVACGLNHTLVVS 1353



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 42/85 (49%), Gaps = 7/85 (8%)

Query: 220  GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSY---- 275
            GV +  VA G  HTLALS  G V+ WG   EGQLGLG     V  P  +  ++  +    
Sbjct: 1456 GVHVQDVAVGAEHTLALSSTGDVYAWGSNSEGQLGLG-HTNHVREPTVVTMLQGKHIHQV 1514

Query: 276  --GKDRSAALSRGSVNSEGPGFRVP 298
              G+  SAA +  S+    PG  VP
Sbjct: 1515 SAGRCHSAAWTAPSLPPRAPGSSVP 1539


>gi|428178434|gb|EKX47309.1| hypothetical protein GUITHDRAFT_137494 [Guillardia theta CCMP2712]
          Length = 432

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 125/256 (48%), Gaps = 37/256 (14%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGL-GSRIRMVSSPHPIPCIESSYGKDRSA 281
           IA VAAG  HTLA S  G+++ WG    GQLG   + +++   P  I  +          
Sbjct: 156 IADVAAGFWHTLAASKKGKLYAWGSNKHGQLGHHDTAVKLAVEPQEILLLR--------- 206

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL 341
                    + P        +K +ACG  HS  +T  G + T+G+G +G+ G GST+DE 
Sbjct: 207 ---------DAP--------IKQVACGSYHSMALTKDGEVYTWGFGAHGRLGHGSTEDEF 249

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
            P  V +L+G  I  + AG  ++  +S+ G V+ +G   F  LG G  + +  P +LD P
Sbjct: 250 MPKRVEALVGENISSIHAGFEYSSAVSTSGKVFVWGYGHFYVLGQGDKKDQLAPVVLDFP 309

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-----EG 456
           +      + ++ G+ H A ++  G +F WG   +G LG G +   NI  + T+     + 
Sbjct: 310 T----SIRQLAFGSFHAAAVSHSGMLFTWGHATHGPLGHG-LKSPNIILEPTVLDAPAQL 364

Query: 457 CVPRNVACGWWHTLLL 472
              + VACG  HTL++
Sbjct: 365 QNSKQVACGSQHTLVV 380



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 85/284 (29%), Positives = 132/284 (46%), Gaps = 38/284 (13%)

Query: 187 KRRRISLAKQTAESSSSGDEN--LSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWG 244
           KR  +  ++ T  S+    EN  LSA P +  L+ G   + +  G    + L+    +W 
Sbjct: 11  KRMLVCTSRWTMSSAFRHKENSMLSA-PLICRLHAG---SNLIHGREQKVTLAGARTLWS 66

Query: 245 WGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKG 304
           WG    G+ G G            P  E          + +     E P   +P   +K 
Sbjct: 67  WGSADHGRGGSGGHTDA-------PIFE---------VIQKEPEKVEKP--VLPAKLIKK 108

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ-IEGVAAGLWH 363
           +ACGG HS ++T++G LLT G    GQ G G+ ++    +    + G + I  VAAG WH
Sbjct: 109 VACGGAHSMIVTESGRLLTCGLNDNGQLGLGNLEN---ASEFEEVKGTESIADVAAGFWH 165

Query: 364 TICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPS----LENVHSKSVSCGARHTA 419
           T+  S  G +YA+G N+ GQLG      +T  +L   P     L +   K V+CG+ H+ 
Sbjct: 166 TLAASKKGKLYAWGSNKHGQLG----HHDTAVKLAVEPQEILLLRDAPIKQVACGSYHSM 221

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVA 463
            +  DG+V+ WG+  +G+LG G   D  +P +V  E  V  N++
Sbjct: 222 ALTKDGEVYTWGFGAHGRLGHGSTEDEFMPKRV--EALVGENIS 263



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 120/433 (27%), Positives = 180/433 (41%), Gaps = 78/433 (18%)

Query: 58  MAISDSRKLITWGSTDDLGQSYVTSGKHGEIP-------EP----FPLPTEASIVKAAAG 106
           + ++ +R L +WGS D        SG H + P       EP     P+     I K A G
Sbjct: 56  VTLAGARTLWSWGSAD---HGRGGSGGHTDAPIFEVIQKEPEKVEKPVLPAKLIKKVACG 112

Query: 107 WAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRS--- 163
            AH + VTE G + T G  +        G L  G   +   FE      TE ++  +   
Sbjct: 113 GAHSMIVTESGRLLTCGLNDN-------GQLGLGNLENASEFEEVKG--TESIADVAAGF 163

Query: 164 --QVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGV 221
              ++ S  G          G+ G     + LA +  E               + L    
Sbjct: 164 WHTLAASKKGKLYAWGSNKHGQLGHHDTAVKLAVEPQE---------------ILLLRDA 208

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
            I  VA G  H++AL+  G+V+ WG+G  G+LG GS              E  +   R  
Sbjct: 209 PIKQVACGSYHSMALTKDGEVYTWGFGAHGRLGHGS-------------TEDEFMPKRVE 255

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL 341
           AL               G  +  I  G  +S+ ++ +G +  +G+G +   GQG   D+L
Sbjct: 256 ALV--------------GENISSIHAGFEYSSAVSTSGKVFVWGYGHFYVLGQGDKKDQL 301

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL--PRLLD 399
           +P  +       I  +A G +H   +S  G ++ +G    G LG G      +  P +LD
Sbjct: 302 APVVLD--FPTSIRQLAFGSFHAAAVSHSGMLFTWGHATHGPLGHGLKSPNIILEPTVLD 359

Query: 400 APS-LENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGC 457
           AP+ L+N  SK V+CG++HT V+   G VF +G    GQLGLG  +D   P Q+    G 
Sbjct: 360 APAQLQN--SKQVACGSQHTLVVTGTGDVFSFGLGGQGQLGLGSDLDHYEPKQIPRFVGK 417

Query: 458 VPRNVACGWWHTL 470
             R VACG +H +
Sbjct: 418 SLRQVACGLFHCI 430


>gi|403355850|gb|EJY77515.1| RCC1 and BTB domain-containing protein, putative [Oxytricha
           trifallax]
          Length = 546

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 85/265 (32%), Positives = 134/265 (50%), Gaps = 39/265 (14%)

Query: 214 LVTLNPGVRIATVAA--GGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           LV    G  I  + A  G  H +AL++ G+V+ +G+  +GQLG G +   ++SP  +   
Sbjct: 57  LVEKLRGKNIVKIFASNGCEHVIALTNNGKVFSFGFNVKGQLGHGDQTS-INSPKQVE-- 113

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAV-ITDAGALLTFGWGLYG 330
                     ALSR               +V  + C   H+     D   + + G   YG
Sbjct: 114 ----------ALSR--------------KFVTAVGCSYYHTIFSCADEMEIYSCGRNDYG 149

Query: 331 QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLG-TGGD 389
           Q G G+ DD+ SP  + +L G +I  +  G +H++  S DG++++FG N  GQLG TG D
Sbjct: 150 QLGLGNLDDKNSPTLIEALNGKRIVSIGCGQYHSVVSSIDGEIFSFGRNDSGQLGITGSD 209

Query: 390 QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNI- 448
              +LP+      ++N+ S  ++CG  HT  I ++G+++ WG N  GQLG+G    + I 
Sbjct: 210 GNISLPK-----EVKNLKSTQIACGYYHTVAI-NNGQLYSWGKNDSGQLGIGIYSAKEIL 263

Query: 449 PSQV-TIEGCVPRNVACGWWHTLLL 472
           P+ V  +E     +VACG +HTL L
Sbjct: 264 PTLVRDLEDQEIVSVACGCYHTLAL 288



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 80/328 (24%), Positives = 134/328 (40%), Gaps = 53/328 (16%)

Query: 99  SIVK--AAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLT 156
           +IVK  A+ G  H +A+T  G+V+++G+        V G L  G        ++ S    
Sbjct: 65  NIVKIFASNGCEHVIALTNNGKVFSFGF-------NVKGQLGHG--------DQTSINSP 109

Query: 157 EQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVT 216
           +QV   S+   ++ G S         +E       S  +        G+ +    P L+ 
Sbjct: 110 KQVEALSRKFVTAVGCSYYHTIFSCADE---MEIYSCGRNDYGQLGLGNLDDKNSPTLIE 166

Query: 217 LNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYG 276
              G RI ++  G  H++  S  G+++ +G    GQLG+      +S P  +  ++S+  
Sbjct: 167 ALNGKRIVSIGCGQYHSVVSSIDGEIFSFGRNDSGQLGITGSDGNISLPKEVKNLKST-- 224

Query: 277 KDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG- 335
                                       IACG  H+  I + G L ++G    GQ G G 
Sbjct: 225 ---------------------------QIACGYYHTVAINN-GQLYSWGKNDSGQLGIGI 256

Query: 336 STDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLP 395
            +  E+ P  V  L   +I  VA G +HT+ +   G +++FG N  GQLG G       P
Sbjct: 257 YSAKEILPTLVRDLEDQEIVSVACGCYHTLALGYAGQLFSFGRNSHGQLGDGTTNNSCKP 316

Query: 396 RLLDAPSLENVHSKSVSCGARHTAVIAD 423
            L+    L +     ++ G  H+ V+A+
Sbjct: 317 LLIQG--LIDKKVCQIAAGFYHSIVLAN 342



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 61/127 (48%), Gaps = 12/127 (9%)

Query: 357 VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLP-----------RLLDAPSLEN 405
           VAAG  HT+ ++  GDVY+ G N+ G   + G  A +             +L++    +N
Sbjct: 6   VAAGNEHTLILTDCGDVYSGGYNEMGNSLSQGPNAMSQNNNNNNTRTGQLKLVEKLRGKN 65

Query: 406 VHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVAC 464
           +     S G  H   + ++GKVF +G+N  GQLG GD    N P QV  +       V C
Sbjct: 66  IVKIFASNGCEHVIALTNNGKVFSFGFNVKGQLGHGDQTSINSPKQVEALSRKFVTAVGC 125

Query: 465 GWWHTLL 471
            ++HT+ 
Sbjct: 126 SYYHTIF 132


>gi|115485835|ref|NP_001068061.1| Os11g0545800 [Oryza sativa Japonica Group]
 gi|113645283|dbj|BAF28424.1| Os11g0545800, partial [Oryza sativa Japonica Group]
          Length = 400

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 127/264 (48%), Gaps = 44/264 (16%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI-RMVSSPHPIPCIESSYGKDRS 280
           ++  V+AG  H+ A++  G+++ WG    GQLGLG R  ++VS+P  + C+  +      
Sbjct: 101 KVVEVSAGNHHSCAVTADGKLFAWGRNSSGQLGLGKRAGKVVSTPRKVDCLADA------ 154

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGS---- 336
                                VK +A G  HS   T+ G +L++G    G+ G G     
Sbjct: 155 --------------------RVKMVALGSEHSIATTEEGEVLSWGAAGAGRLGHGHKTSI 194

Query: 337 -----TDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
                T  E +P  + +L G++I+ +AAG+ H+ CI   G ++ FG       G  GD  
Sbjct: 195 LGFSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKGTLFIFGQKTEKGFGRSGD-- 252

Query: 392 ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG--DVIDRNIP 449
           E  P +++    E   S+ V+CG  HT V+ D G ++ WG N+ G LGLG  D++     
Sbjct: 253 ELRPTVVE----EVPFSEEVACGGYHTCVVTDSGDLYSWGSNENGCLGLGGTDMVRSPEV 308

Query: 450 SQVTIEGCVPRNVACGWWHTLLLA 473
            + ++       V+CGW HT +++
Sbjct: 309 LKSSLFKFPVSKVSCGWKHTAVIS 332



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 92/343 (26%), Positives = 138/343 (40%), Gaps = 61/343 (17%)

Query: 97  EASIVKAAAGWAHCVAVTEGGEVYTWGWKEC--VPSGRVFGDLSTGTGLDKDVFERQSSF 154
           +  +V+ +AG  H  AVT  G+++ WG      +  G+  G + + T    D        
Sbjct: 99  DEKVVEVSAGNHHSCAVTADGKLFAWGRNSSGQLGLGKRAGKVVS-TPRKVDCLADARVK 157

Query: 155 LTEQVSPRSQVSRSSGGTSS-GTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPC 213
           +    S  S  +   G   S G  G G    G K   +  +  T+E +          P 
Sbjct: 158 MVALGSEHSIATTEEGEVLSWGAAGAGRLGHGHKTSILGFSITTSEYT----------PR 207

Query: 214 LVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES 273
           L+    GV+I  +AAG  H+  + + G ++ +G   E   G                   
Sbjct: 208 LIKNLDGVKIKRIAAGMLHSACIDEKGTLFIFGQKTEKGFG------------------- 248

Query: 274 SYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCG 333
                RS    R +V  E P       + + +ACGG H+ V+TD+G L ++G    G  G
Sbjct: 249 -----RSGDELRPTVVEEVP-------FSEEVACGGYHTCVVTDSGDLYSWGSNENGCLG 296

Query: 334 QGSTDDELSPNCV-SSLLGIQIEGVAAGLWHTICISSDGDVYAFG-----GNQF------ 381
            G TD   SP  + SSL    +  V+ G  HT  IS  GD+Y +G     G  F      
Sbjct: 297 LGGTDMVRSPEVLKSSLFKFPVSKVSCGWKHTAVISG-GDIYTWGWGGANGTFFEEGHSS 355

Query: 382 -GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
            GQLG G D     P +++    +N  +  VSCG  HT  I +
Sbjct: 356 GGQLGHGNDVDYFEPMMVEFG--KNARAVHVSCGFNHTGAIFE 396



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 6/130 (4%)

Query: 315 ITDAGALLTFGWGLYGQCGQGST-DDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDV 373
           +T++G +   G   +GQ G GS+    L P  VS      +E V+AG  H+  +++DG +
Sbjct: 63  LTESGRVFAAGLNDFGQLGIGSSVTHSLEPIEVSGFDEKVVE-VSAGNHHSCAVTADGKL 121

Query: 374 YAFGGNQFGQLGTGGDQAETL--PRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWG 431
           +A+G N  GQLG G    + +  PR +D   L +   K V+ G+ H+    ++G+V  WG
Sbjct: 122 FAWGRNSSGQLGLGKRAGKVVSTPRKVDC--LADARVKMVALGSEHSIATTEEGEVLSWG 179

Query: 432 WNKYGQLGLG 441
               G+LG G
Sbjct: 180 AAGAGRLGHG 189



 Score = 38.5 bits (88), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 16/99 (16%)

Query: 31  LSPLVVR-LPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDD----LGQSYVTSGKH 85
           L P VV  +P +   A    CGG       ++DS  L +WGS ++    LG + +     
Sbjct: 254 LRPTVVEEVPFSEEVA----CGGY--HTCVVTDSGDLYSWGSNENGCLGLGGTDMVRSPE 307

Query: 86  GEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGW 124
                 F  P    + K + GW H  AV  GG++YTWGW
Sbjct: 308 VLKSSLFKFP----VSKVSCGWKH-TAVISGGDIYTWGW 341


>gi|307178981|gb|EFN67497.1| Probable E3 ubiquitin-protein ligase HERC4 [Camponotus floridanus]
          Length = 1048

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 127/264 (48%), Gaps = 33/264 (12%)

Query: 215 VTLNPGVR---IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           + L PG+       +A G  HTLA+++ GQ++ WG   +GQLGL S          + C 
Sbjct: 75  LQLIPGLDAFVFKKIACGSCHTLAVNEWGQLFSWGCNMKGQLGLNS----------VDCT 124

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
           E      R+  + +           +  + +  IACG  HS  +T+ G L ++G    GQ
Sbjct: 125 E------RTPRMVKA----------LGTSVIVQIACGIEHSIALTNDGELYSWGSNREGQ 168

Query: 332 CGQGS-TDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            G GS T  E+ P  + +L  + I  +A G +HT+ IS  G V+A+G N FGQLG    Q
Sbjct: 169 LGIGSHTVTEIKPKRIITLAAVPIAFIACGGYHTVVISKSGVVFAWGRNTFGQLGLNDTQ 228

Query: 391 AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
              +P  L   +L N      +CG   +  +  DG VF  G   YGQLG G+ ++  +P 
Sbjct: 229 QRIVPCQLR--TLRNAKVCYAACGEEFSVFLTLDGGVFTCGAGMYGQLGHGNGMNEILPR 286

Query: 451 QVT-IEGCVPRNVACGWWHTLLLA 473
           QV  + G     ++CG  HTL L 
Sbjct: 287 QVMELMGSTVTQISCGKRHTLALV 310



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 101/218 (46%), Gaps = 29/218 (13%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  +A G  H++AL++ G+++ WG   EGQLG+GS       P  I  + +         
Sbjct: 139 IVQIACGIEHSIALTNDGELYSWGSNREGQLGIGSHTVTEIKPKRIITLAA--------- 189

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                         VP   +  IACGG H+ VI+ +G +  +G   +GQ G   T   + 
Sbjct: 190 --------------VP---IAFIACGGYHTVVISKSGVVFAWGRNTFGQLGLNDTQQRIV 232

Query: 343 PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPS 402
           P  + +L   ++   A G   ++ ++ DG V+  G   +GQLG G    E LPR      
Sbjct: 233 PCQLRTLRNAKVCYAACGEEFSVFLTLDGGVFTCGAGMYGQLGHGNGMNEILPR--QVME 290

Query: 403 LENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLG 439
           L       +SCG RHT A++   G+V+ WG    GQLG
Sbjct: 291 LMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLG 328



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 88/331 (26%), Positives = 133/331 (40%), Gaps = 64/331 (19%)

Query: 102 KAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDK-DVFERQSSFLTEQVS 160
           K A G  H +AV E G++++WG   C   G++        GL+  D  ER    +  +  
Sbjct: 88  KIACGSCHTLAVNEWGQLFSWG---CNMKGQL--------GLNSVDCTERTPRMV--KAL 134

Query: 161 PRSQVSRSSGGTSSGTDGRGSGEE---GSKRR-RISLAKQTAESSSSGDENLSAFPCLVT 216
             S + + + G          GE    GS R  ++ +   T              P  + 
Sbjct: 135 GTSVIVQIACGIEHSIALTNDGELYSWGSNREGQLGIGSHTVTEIK---------PKRII 185

Query: 217 LNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYG 276
               V IA +A GG HT+ +S  G V+ WG    GQLGL       +    +PC   +  
Sbjct: 186 TLAAVPIAFIACGGYHTVVISKSGVVFAWGRNTFGQLGLND-----TQQRIVPCQLRTL- 239

Query: 277 KDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGS 336
             R+A +                      ACG   S  +T  G + T G G+YGQ G G+
Sbjct: 240 --RNAKVCYA-------------------ACGEEFSVFLTLDGGVFTCGAGMYGQLGHGN 278

Query: 337 TDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFGGNQFGQLGTGGDQAETLP 395
             +E+ P  V  L+G  +  ++ G  HT+  + S G VYA+G    GQLG    ++ T P
Sbjct: 279 GMNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNRASRSATTP 338

Query: 396 RLLDAP---------SLENVHSKSVSCGARH 417
            ++  P           +  HS  + C  RH
Sbjct: 339 LVVLGPWSSASGSSMKFDLYHSPQIDCVVRH 369



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 54/156 (34%), Positives = 79/156 (50%), Gaps = 10/156 (6%)

Query: 324 FGWG--LYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN 379
           F WG  ++G+ G G  +DE    P  V      ++E +A G  +T+ I++DG VY+ G N
Sbjct: 2   FCWGSTIHGELGLGGIEDENIFMPRQVDFAKANEVEQIACGENYTVTITNDGQVYSCGNN 61

Query: 380 QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG 439
            +GQLG      +   RL   P L+    K ++CG+ HT  + + G++F WG N  GQLG
Sbjct: 62  DYGQLG----HEKARKRLQLIPGLDAFVFKKIACGSCHTLAVNEWGQLFSWGCNMKGQLG 117

Query: 440 LGDV-IDRNIPSQVTIEGC-VPRNVACGWWHTLLLA 473
           L  V      P  V   G  V   +ACG  H++ L 
Sbjct: 118 LNSVDCTERTPRMVKALGTSVIVQIACGIEHSIALT 153


>gi|440800955|gb|ELR21981.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 447

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 94/305 (30%), Positives = 140/305 (45%), Gaps = 43/305 (14%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMV- 262
           GD+     P  V    GVRI  VAAG  H+L LSD G V+ +G G +G LG G + R + 
Sbjct: 149 GDQRTQMIPRPVLSLSGVRIVKVAAGAHHSLVLSDQGNVFSFGVGIDGSLGHGDQARQLV 208

Query: 263 -----------------SSPHPIPCIES----SYGKDRSAALSRGSVNSEGPGFRVPGNY 301
                             S H +   ES    S+G     AL  G  +      ++  ++
Sbjct: 209 PKLISSLQREKVVDIAAGSAHSLVVAESGDVYSFGLGSEGALGHGDTDMSLVPKKIE-HF 267

Query: 302 VK----GIACGGRHSAVIT------DAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
           V+     +A GG HS V++        G +L+FG   YGQ G G          ++S   
Sbjct: 268 VQRPAVKVAAGGSHSLVLSKLYVLEQEGRVLSFGQNSYGQLGLGHF-----SRMIASPAQ 322

Query: 352 IQIEGVA----AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVH 407
           +Q+E  A    AG  H++ +++DG VY+FG  Q GQLG G D  +  P      SLE   
Sbjct: 323 VQVEAAAVEIEAGAHHSLVLTNDGRVYSFGLAQHGQLGHGNDLRDN-PEPTLIQSLERER 381

Query: 408 SKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWW 467
              V+ G   + V++ +G VF +G  K G+LG GD  +   P+ V   G     ++ G+ 
Sbjct: 382 IVDVAAGNNFSLVLSAEGTVFSFGCGKNGRLGKGDESNATQPTVVFAAGHTVSAISAGYS 441

Query: 468 HTLLL 472
           H+L++
Sbjct: 442 HSLVV 446



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 82/286 (28%), Positives = 127/286 (44%), Gaps = 40/286 (13%)

Query: 198 AESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGG-----EGQ 252
           A+ S  GD      P  V      R+  V+AG  H+L  +  G +  +GYG      +G+
Sbjct: 86  ADPSGHGDHVDKLRPKCVEALARERVRDVSAGLYHSLVATKDGGLLSFGYGSANVVVDGR 145

Query: 253 LGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHS 312
           LG                    +G  R+  + R       P   + G  +  +A G  HS
Sbjct: 146 LG--------------------HGDQRTQMIPR-------PVLSLSGVRIVKVAAGAHHS 178

Query: 313 AVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGD 372
            V++D G + +FG G+ G  G G    +L P  +SSL   ++  +AAG  H++ ++  GD
Sbjct: 179 LVLSDQGNVFSFGVGIDGSLGHGDQARQLVPKLISSLQREKVVDIAAGSAHSLVVAESGD 238

Query: 373 VYAFGGNQFGQLGTGGDQAETLPR----LLDAPSLENVHSKSVSCGARHTAVIADDGKVF 428
           VY+FG    G LG G      +P+     +  P+++     S S       V+  +G+V 
Sbjct: 239 VYSFGLGSEGALGHGDTDMSLVPKKIEHFVQRPAVKVAAGGSHSLVLSKLYVLEQEGRVL 298

Query: 429 CWGWNKYGQLGLGDVIDRNI--PSQVTIEGCVPRNVACGWWHTLLL 472
            +G N YGQLGLG    R I  P+QV +E      +  G  H+L+L
Sbjct: 299 SFGQNSYGQLGLGH-FSRMIASPAQVQVEAAAV-EIEAGAHHSLVL 342



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 101/351 (28%), Positives = 151/351 (43%), Gaps = 77/351 (21%)

Query: 88  IPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDV 147
           IP P    +   IVK AAG  H + +++ G V+++G         + G L  G    + V
Sbjct: 156 IPRPVLSLSGVRIVKVAAGAHHSLVLSDQGNVFSFGVG-------IDGSLGHGDQARQLV 208

Query: 148 FERQSSFLTEQV------SPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESS 201
            +  SS   E+V      S  S V   SG   S     G G EG+               
Sbjct: 209 PKLISSLQREKVVDIAAGSAHSLVVAESGDVYS----FGLGSEGAL-------------- 250

Query: 202 SSGDENLSAFPCLV---TLNPGVRIATVAAGGRHTLALSDI------GQVWGWGYGGEGQ 252
             GD ++S  P  +      P V+   VAAGG H+L LS +      G+V  +G    GQ
Sbjct: 251 GHGDTDMSLVPKKIEHFVQRPAVK---VAAGGSHSLVLSKLYVLEQEGRVLSFGQNSYGQ 307

Query: 253 LGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHS 312
           LGLG   RM++SP  +           +AA+                     I  G  HS
Sbjct: 308 LGLGHFSRMIASPAQVQV--------EAAAVE--------------------IEAGAHHS 339

Query: 313 AVITDAGALLTFGWGLYGQCGQGS-TDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDG 371
            V+T+ G + +FG   +GQ G G+   D   P  + SL   +I  VAAG   ++ +S++G
Sbjct: 340 LVLTNDGRVYSFGLAQHGQLGHGNDLRDNPEPTLIQSLERERIVDVAAGNNFSLVLSAEG 399

Query: 372 DVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS-VSCGARHTAVI 421
            V++FG  + G+LG G +   T P ++ A      H+ S +S G  H+ V+
Sbjct: 400 TVFSFGCGKNGRLGKGDESNATQPTVVFAAG----HTVSAISAGYSHSLVV 446



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 53/162 (32%), Positives = 87/162 (53%), Gaps = 10/162 (6%)

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
           AG +++FG  L    G G   D+L P CV +L   ++  V+AGL+H++  + DG + +FG
Sbjct: 77  AGNVVSFG--LADPSGHGDHVDKLRPKCVEALARERVRDVSAGLYHSLVATKDGGLLSFG 134

Query: 378 ---GNQF--GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGW 432
               N    G+LG G  + + +PR     SL  V    V+ GA H+ V++D G VF +G 
Sbjct: 135 YGSANVVVDGRLGHGDQRTQMIPR--PVLSLSGVRIVKVAAGAHHSLVLSDQGNVFSFGV 192

Query: 433 NKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLA 473
              G LG GD   + +P  + +++     ++A G  H+L++A
Sbjct: 193 GIDGSLGHGDQARQLVPKLISSLQREKVVDIAAGSAHSLVVA 234


>gi|327277954|ref|XP_003223728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Anolis carolinensis]
          Length = 1060

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 112/249 (44%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  HTL L+D GQV+ WG+  +GQLGL         P  I  +           
Sbjct: 86  IVAVSCGEAHTLTLNDKGQVYAWGFAADGQLGLPGTEEYTRVPRNIKSLSDVQ------- 138

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDEL 341
                              +  +ACG  HS  ++    + ++G   +GQ G G     + 
Sbjct: 139 -------------------IVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLKKQT 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  + SLLGI    +AAG  H+  ++  G V+ +G N+FGQLG   +    +P LL   
Sbjct: 180 SPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDRYVPNLL--K 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL +     +SCG  HTA +  +G VF +G   YGQLG         P +V  + G +  
Sbjct: 238 SLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHEINPRKVFELMGNIVT 297

Query: 461 NVACGWWHT 469
            +ACG  HT
Sbjct: 298 QIACGRQHT 306



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 83/266 (31%), Positives = 124/266 (46%), Gaps = 38/266 (14%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
           G E  +  P  +     V+I  VA G  H+LALS   +V+ WG    GQLGLG  ++  +
Sbjct: 120 GTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLKKQT 179

Query: 264 SPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLT 323
           SP     I+S  G                    +P      IA GG HS  +T +GA+  
Sbjct: 180 SPQ---LIKSLLG--------------------IP---FGQIAAGGAHSFALTLSGAV-- 211

Query: 324 FGWGL--YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
           FGWG   +GQ G    +D   PN + SL   +I  ++ G  HT  ++ +G V+ FG   +
Sbjct: 212 FGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGY 271

Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLGL 440
           GQLG      E  PR +    + N+ ++ ++CG +HT A +   G+++ +G    GQLG+
Sbjct: 272 GQLGHNSTGHEINPRKV-FELMGNIVTQ-IACGRQHTSAFVPSTGRIYSFGLGGNGQLGM 329

Query: 441 GDVIDRNIPSQVT-----IEGCVPRN 461
           G   +R  P  V        G +P N
Sbjct: 330 GSTSNRKSPFPVKGNFLPFNGQIPLN 355



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P   +  L   +  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG+   GQL
Sbjct: 61  NDLGQL--GHEKSRKRPEQVGALDAQNI--VAVSCGEAHTLTLNDKGQVYAWGFAADGQL 116

Query: 439 GLGDV-----IDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   ++      VACG++H+L L+
Sbjct: 117 GLPGTEEYTRVPRNIKSLSDVQIV---QVACGYYHSLALS 153



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 66/288 (22%), Positives = 115/288 (39%), Gaps = 57/288 (19%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  + ++D  ++  WG   D       + ++  +P      ++  IV+ A
Sbjct: 84  QNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLGLPGTEEYTRVPRNIKSLSDVQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++G EV++WG  +        G L  G  L K            Q SP  Q
Sbjct: 144 CGYYHSLALSKGSEVFSWGQNK-------HGQLGLGYDLKK------------QTSP--Q 182

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLA-------KQTAESSSSGDENLSAFPCLVTL 217
           + +S  G   G    G    G+    ++L+       +         DEN    P L+  
Sbjct: 183 LIKSLLGIPFGQIAAG----GAHSFALTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 218 NPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG----------------LGSRIRM 261
               +I  ++ G  HT AL+  G V+ +G GG GQLG                +G+ +  
Sbjct: 239 LRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHEINPRKVFELMGNIVTQ 298

Query: 262 VS--SPHPIPCIES-----SYGKDRSAALSRGSVNSEGPGFRVPGNYV 302
           ++    H    + S     S+G   +  L  GS ++    F V GN++
Sbjct: 299 IACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGSTSNRKSPFPVKGNFL 346


>gi|356501403|ref|XP_003519514.1| PREDICTED: uncharacterized protein LOC100806439 [Glycine max]
          Length = 1109

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 63/171 (36%), Positives = 97/171 (56%), Gaps = 4/171 (2%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ IACGGRH+A++T  G + ++G    G+ G G   D L P  + +L    IE VA G 
Sbjct: 312 VQNIACGGRHAALVTKQGEIFSWGEEAGGRLGHGVDSDVLHPKLIEALSNTNIELVACGE 371

Query: 362 WHTICISSDGDVYAFGGNQF--GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
           +HT  ++  GD+Y +G   +  G LG G   +  +P+ ++ P LE +H   +SCG  HTA
Sbjct: 372 YHTCAVTLSGDLYTWGNGTYNCGLLGHGNQVSHWVPKRVNGP-LEGIHVSYISCGPWHTA 430

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
           V+   G++F +G   +G LG GD    ++P +V +++G      ACG WHT
Sbjct: 431 VVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESLKGLRTVRAACGVWHT 481



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 133/283 (46%), Gaps = 48/283 (16%)

Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
           S FP  +     + +  +A GGRH   ++  G+++ WG    G+LG G    ++   HP 
Sbjct: 298 SLFPKSLESAVVLDVQNIACGGRHAALVTKQGEIFSWGEEAGGRLGHGVDSDVL---HP- 353

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL 328
             IE         ALS  ++              + +ACG  H+  +T +G L T+G G 
Sbjct: 354 KLIE---------ALSNTNI--------------ELVACGEYHTCAVTLSGDLYTWGNGT 390

Query: 329 Y--GQCGQGSTDDELSPNCVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLG 385
           Y  G  G G+      P  V+  L GI +  ++ G WHT  ++S G ++ FG   FG LG
Sbjct: 391 YNCGLLGHGNQVSHWVPKRVNGPLEGIHVSYISCGPWHTAVVTSAGQLFTFGDGTFGALG 450

Query: 386 TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD------------DGKVFCWGWN 433
            G  ++ +LPR  +  SL+ + +   +CG  HTA + +             GK+F WG  
Sbjct: 451 HGDRKSVSLPR--EVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDG 508

Query: 434 KYGQLGLGDVIDRNIPSQVTIEGCVPR--NVACGWWHTLLLAV 474
             G+LG GD   + +P++V +    P    VACG  H+L +A+
Sbjct: 509 DKGRLGHGDKEAKLVPTRVALVNVKPNFCQVACG--HSLTVAL 549



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 121/279 (43%), Gaps = 48/279 (17%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGE--GQLGLGSRIRMVSSPHPIP 269
           P L+       I  VA G  HT A++  G ++ WG G    G LG G+++      H +P
Sbjct: 353 PKLIEALSNTNIELVACGEYHTCAVTLSGDLYTWGNGTYNCGLLGHGNQV-----SHWVP 407

Query: 270 CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
                             VN  GP   + G +V  I+CG  H+AV+T AG L TFG G +
Sbjct: 408 ----------------KRVN--GP---LEGIHVSYISCGPWHTAVVTSAGQLFTFGDGTF 446

Query: 330 GQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI------------SSDGDVYAFG 377
           G  G G       P  V SL G++    A G+WHT  +             S G ++ +G
Sbjct: 447 GALGHGDRKSVSLPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 506

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSK--SVSCGARHTAVIADDGKVFCWGWNKY 435
               G+LG G  +A+ +P  +   +L NV      V+CG   T  +   G V+  G   Y
Sbjct: 507 DGDKGRLGHGDKEAKLVPTRV---ALVNVKPNFCQVACGHSLTVALTTKGHVYTMGSPVY 563

Query: 436 GQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLL 472
           GQLG+    D  +P  V   +       +ACG +H  +L
Sbjct: 564 GQLGIPQA-DGKLPICVEWKLSESFVEEIACGAYHVAVL 601



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 75/262 (28%), Positives = 122/262 (46%), Gaps = 47/262 (17%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G+ ++ ++ G  HT  ++  GQ++ +G G  G LG G R + VS P  +  ++       
Sbjct: 416 GIHVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDR-KSVSLPREVESLK------- 467

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDA------------GALLTFGWG 327
                         G R     V+  ACG  H+A + +             G L T+G G
Sbjct: 468 --------------GLRT----VRA-ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDG 508

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIE--GVAAGLWHTICISSDGDVYAFGGNQFGQLG 385
             G+ G G  + +L P  V+ L+ ++     VA G   T+ +++ G VY  G   +GQLG
Sbjct: 509 DKGRLGHGDKEAKLVPTRVA-LVNVKPNFCQVACGHSLTVALTTKGHVYTMGSPVYGQLG 567

Query: 386 TGGDQAE-TLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVI 444
               QA+  LP  ++   L     + ++CGA H AV+    +V+ WG    G+LG GD  
Sbjct: 568 I--PQADGKLPICVEW-KLSESFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTD 624

Query: 445 DRNIPSQV-TIEGCVPRNVACG 465
           DRN P+ V  ++    +++ACG
Sbjct: 625 DRNTPTLVEALKDKDVKSIACG 646



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 73/138 (52%), Gaps = 6/138 (4%)

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D L P  + S + + ++ +A G  H   ++  G+++++G    G+LG G D     P+L+
Sbjct: 297 DSLFPKSLESAVVLDVQNIACGGRHAALVTKQGEIFSWGEEAGGRLGHGVDSDVLHPKLI 356

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKY--GQLGLGDVIDRNIPSQVT--I 454
           +A  L N + + V+CG  HT  +   G ++ WG   Y  G LG G+ +   +P +V   +
Sbjct: 357 EA--LSNTNIELVACGEYHTCAVTLSGDLYTWGNGTYNCGLLGHGNQVSHWVPKRVNGPL 414

Query: 455 EGCVPRNVACGWWHTLLL 472
           EG     ++CG WHT ++
Sbjct: 415 EGIHVSYISCGPWHTAVV 432



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 69/165 (41%), Gaps = 28/165 (16%)

Query: 204 GDENLSAFPCLVTL-NPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMV 262
           GD+     P  V L N       VA G   T+AL+  G V+  G    GQLG    I   
Sbjct: 516 GDKEAKLVPTRVALVNVKPNFCQVACGHSLTVALTTKGHVYTMGSPVYGQLG----IPQA 571

Query: 263 SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL 322
               PI C+E                      +++  ++V+ IACG  H AV+T    + 
Sbjct: 572 DGKLPI-CVE----------------------WKLSESFVEEIACGAYHVAVLTSRTEVY 608

Query: 323 TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI 367
           T+G G  G+ G G TDD  +P  V +L    ++ +A G   T  I
Sbjct: 609 TWGKGANGRLGHGDTDDRNTPTLVEALKDKDVKSIACGTNFTAAI 653


>gi|330837408|ref|YP_004412049.1| chromosome condensation regulator RCC1 [Sphaerochaeta coccoides DSM
           17374]
 gi|329749311|gb|AEC02667.1| regulator of chromosome condensation RCC1 [Sphaerochaeta coccoides
           DSM 17374]
          Length = 742

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 81/264 (30%), Positives = 129/264 (48%), Gaps = 31/264 (11%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           VR+ +V+AG  +T+ L   G +W  GY   GQLGLG      +   P+P   +S   D S
Sbjct: 354 VRVKSVSAGAYYTMILKTDGTLWATGYNYYGQLGLGDSGSGTNRSTPVPV--TSMNADPS 411

Query: 281 ---AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST 337
               A+S GS+   G  +               H+ ++     L   G+  YG  G G+T
Sbjct: 412 NPAVAISVGSLAYNGTAYL-------------SHTMILKKDSTLWATGYNQYGSLGDGTT 458

Query: 338 DDELSPNCVSSLLG---IQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL 394
            +  +P  V    G     ++ V+AG++HT+ +  DG ++A G N FGQLG G  +A T 
Sbjct: 459 TNRSTPVQVKDNAGGFMTDVKAVSAGVYHTMILQKDGTLWATGRNNFGQLGVG--EANTY 516

Query: 395 PRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-- 452
              +    + +V   +VS G  HT ++  DG ++  G+N +GQLG G + ++N P +V  
Sbjct: 517 TTSIPVQVMTDV--AAVSAGNSHTIILKTDGTLWATGYNNFGQLGDGTMANKNTPVRVKD 574

Query: 453 TIEG----CVPRNVACGWWHTLLL 472
           T +G         V+ G +HT++L
Sbjct: 575 TTDGSGFMTDVAAVSAGAYHTMIL 598



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 108/238 (45%), Gaps = 33/238 (13%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +A V+AG  HT+ L   G +W  GY   GQLG G+   M +   P+   +++        
Sbjct: 528 VAAVSAGNSHTIILKTDGTLWATGYNNFGQLGDGT---MANKNTPVRVKDTT-------- 576

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                   +G GF      V  ++ G  H+ ++ + G L   G+   GQ G G+T +  +
Sbjct: 577 --------DGSGFMTD---VAAVSAGAYHTMILKNNGTLWATGFNSAGQLGDGTTTNRST 625

Query: 343 PNCVSSL-----LGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
           P  V            +  V+ G  HT+ +  DG ++A G N  G+LG G   ++  P  
Sbjct: 626 PVRVKDTTDGSGFMTDVAAVSVGNAHTMILKKDGTLWATGQNSDGRLGDGSTTSKNTPVQ 685

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDV---IDRNIPSQV 452
           + +   +     +VS G  HT ++  D  ++  G+N YGQLGLGD     +R  P QV
Sbjct: 686 VSSMGAD---VAAVSAGENHTMILKKDLTLWATGYNYYGQLGLGDSGSGNNRITPEQV 740



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 114/272 (41%), Gaps = 40/272 (14%)

Query: 212 PCLVTLNPG---VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
           P  V  N G     +  V+AG  HT+ L   G +W  G    GQLG+G      +S  P+
Sbjct: 464 PVQVKDNAGGFMTDVKAVSAGVYHTMILQKDGTLWATGRNNFGQLGVGEANTYTTSI-PV 522

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL 328
             +                              V  ++ G  H+ ++   G L   G+  
Sbjct: 523 QVMTD----------------------------VAAVSAGNSHTIILKTDGTLWATGYNN 554

Query: 329 YGQCGQGSTDDELSPNCVSSL-----LGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQ 383
           +GQ G G+  ++ +P  V            +  V+AG +HT+ + ++G ++A G N  GQ
Sbjct: 555 FGQLGDGTMANKNTPVRVKDTTDGSGFMTDVAAVSAGAYHTMILKNNGTLWATGFNSAGQ 614

Query: 384 LGTGGDQAETLP-RLLDAPSLENVHSK--SVSCGARHTAVIADDGKVFCWGWNKYGQLGL 440
           LG G     + P R+ D        +   +VS G  HT ++  DG ++  G N  G+LG 
Sbjct: 615 LGDGTTTNRSTPVRVKDTTDGSGFMTDVAAVSVGNAHTMILKKDGTLWATGQNSDGRLGD 674

Query: 441 GDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           G    +N P QV+  G     V+ G  HT++L
Sbjct: 675 GSTTSKNTPVQVSSMGADVAAVSAGENHTMIL 706



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/70 (41%), Positives = 42/70 (60%), Gaps = 4/70 (5%)

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDV---IDRNIPSQVTI 454
           ++AP+++ V  KSVS GA +T ++  DG ++  G+N YGQLGLGD     +R+ P  VT 
Sbjct: 347 INAPAVK-VRVKSVSAGAYYTMILKTDGTLWATGYNYYGQLGLGDSGSGTNRSTPVPVTS 405

Query: 455 EGCVPRNVAC 464
               P N A 
Sbjct: 406 MNADPSNPAV 415


>gi|332027112|gb|EGI67208.1| Putative E3 ubiquitin-protein ligase HERC2 [Acromyrmex echinatior]
          Length = 4853

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 131/274 (47%), Gaps = 38/274 (13%)

Query: 204  GDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
            GD+N    P  +       I  VA  +GG+H LAL+  G+V+ WG G +G+LG G+ I +
Sbjct: 3080 GDDNNMCEPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNCISL 3139

Query: 262  VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
               P  I  ++S   +D                          IACG  HSA I   G L
Sbjct: 3140 -DKPKLIEVLKSKRIRD--------------------------IACGSGHSAAIASNGEL 3172

Query: 322  LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGN 379
             T+G G YG+ G G T  +  P  V +L+G ++  VA G     T+ +++DG VY++G  
Sbjct: 3173 YTWGLGEYGRLGHGDTITQTRPKLVQALIGHRVVQVACGSRDAQTMALTTDGYVYSWGDG 3232

Query: 380  QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG 439
             FG+LG GG      P L+D   L N+    V CGA+ +  +   G+V+ WG   Y +LG
Sbjct: 3233 DFGKLGRGGSDGCYTPLLVD--RLNNLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLG 3290

Query: 440  LGDVIDRNIPSQVTIEGCVPR---NVACGWWHTL 470
             G+  D ++     +EG   +   +VA G  H L
Sbjct: 3291 HGN--DHHVRKPTLVEGLRGKKIIHVAVGALHCL 3322



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 89/303 (29%), Positives = 132/303 (43%), Gaps = 80/303 (26%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            ++   V++GG+H +ALS  G V+ WG G +G+LG G++   VS   P   IE   G +  
Sbjct: 4081 IKKVAVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNK---VSYDRP-KLIEDLLGVE-- 4134

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                 +  IACGG HSA IT AG L T+G G YG+ G G +DD+
Sbjct: 4135 ---------------------IVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQ 4173

Query: 341  LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V +L   ++  VA  +G   T+C++ D +V+++G   +G+LG GG     +P  +
Sbjct: 4174 LRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKI 4233

Query: 399  DA--------------------------------------------------PSLENVHS 408
            D+                                                   +L+    
Sbjct: 4234 DSLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKI 4293

Query: 409  KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWW 467
             S++ G+ H    +D G+VF WG N  GQLG G     + P  V  ++G     VACG  
Sbjct: 4294 ISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHALQGKKITRVACGSA 4353

Query: 468  HTL 470
            HTL
Sbjct: 4354 HTL 4356



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 90/273 (32%), Positives = 132/273 (48%), Gaps = 35/273 (12%)

Query: 228  AGGRHTL-ALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIE---------SSYGK 277
            AGG  TL A++  G+++  GYG  G+LG+G     V  P  +  I+         SS GK
Sbjct: 4033 AGGEQTLFAVTADGKIYSTGYGAAGRLGIGG-TDSVMIPTLLESIQHVFIKKVAVSSGGK 4091

Query: 278  DRSAALSRGSVNSEGPG------------FRVP-------GNYVKGIACGGRHSAVITDA 318
               A  S G V S G G            +  P       G  +  IACGG HSA IT A
Sbjct: 4092 HCIALSSEGHVYSWGEGDDGKLGHGNKVSYDRPKLIEDLLGVEIVDIACGGHHSAAITSA 4151

Query: 319  GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAF 376
            G L T+G G YG+ G G +DD+L P  V +L   ++  VA  +G   T+C++ D +V+++
Sbjct: 4152 GWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSW 4211

Query: 377  GGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYG 436
            G   +G+LG GG     +P  +D  SL  +    V CG++ +  +   G V+ WG   Y 
Sbjct: 4212 GDGDYGKLGRGGSDGCKVPLKID--SLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYH 4269

Query: 437  QLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWH 468
            +LG G       P +V  ++G    ++A G  H
Sbjct: 4270 RLGHGTDDHVRRPRKVAALQGKKIISIATGSLH 4302



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 117/246 (47%), Gaps = 31/246 (12%)

Query: 228 AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI-----RMVSSPHPIPCIESSYGKDRSAA 282
           A G+H LAL+  G V+ WG G  G+LG G  I     +++ +      I  + G   SAA
Sbjct: 575 ADGKHYLALTQDGCVYSWGNGDGGRLGHGDTISYDEPKLIEALLEKNIIFIACGSTYSAA 634

Query: 283 LS---------RGSVNSEGPG-----------FRVPGNYVKGIACGG--RHSAVITDAGA 320
           LS         RG+    G G             + G+ V  +ACG     +  +T +G 
Sbjct: 635 LSANGELYTWGRGNYGRLGHGNFDDVMTPTLVTTLKGHTVVHVACGSGDSQTLCVTASGI 694

Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
           + ++G G YG+ G+G TD   +P  V  LL I +  V  G   +  +++ G+VY +G   
Sbjct: 695 VFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAHGEVYTWGKGD 754

Query: 381 FGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG- 439
             +LG G ++    P++++  SL +   K +S G  H   + +D  V+ WG N YGQ+  
Sbjct: 755 AYRLGHGSEEHVRYPKVIE--SLRDRKVKDLSVGTTHILALTEDQFVYGWGRNDYGQIDP 812

Query: 440 -LGDVI 444
            LG +I
Sbjct: 813 TLGPII 818



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 108/234 (46%), Gaps = 29/234 (12%)

Query: 212  PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS-----RIRMVSSPH 266
            P L+    GV I  +A GG H+ A++  G ++ WG G  G+LG G      R ++V +  
Sbjct: 4124 PKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQ 4183

Query: 267  PIPCIESSYGKDRSAAL--------------SRGSVNSEGP-GFRVP-------GNYVKG 304
                I+ + G   +  L                G +   G  G +VP       G  V  
Sbjct: 4184 DYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVVK 4243

Query: 305  IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
            + CG + S  +T +GA+ T+G G Y + G G+ D    P  V++L G +I  +A G  H 
Sbjct: 4244 VECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHC 4303

Query: 365  ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
            +  S  G+V+ +G N  GQLG G   A   PRL+ A  L+      V+CG+ HT
Sbjct: 4304 VACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHA--LQGKKITRVACGSAHT 4355



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 114/238 (47%), Gaps = 36/238 (15%)

Query: 233  TLALSDIGQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNS 290
            TL+    G ++GWG+   GQLG   G ++++     P PC                S+++
Sbjct: 3987 TLSWDGSGAIYGWGHNHRGQLGGLEGPKVKL-----PAPC---------------ESLSA 4026

Query: 291  EGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLL 350
              P           +A G +    +T  G + + G+G  G+ G G TD  + P  + S+ 
Sbjct: 4027 LRP---------IQLAGGEQTLFAVTADGKIYSTGYGAAGRLGIGGTDSVMIPTLLESIQ 4077

Query: 351  GIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHS 408
             + I+ VA  +G  H I +SS+G VY++G    G+LG G   +   P+L++   L  V  
Sbjct: 4078 HVFIKKVAVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVSYDRPKLIE--DLLGVEI 4135

Query: 409  KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
              ++CG  H+A I   G ++ WG  +YG+LG GD  D+  P  V  ++     +VACG
Sbjct: 4136 VDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACG 4193



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 93/337 (27%), Positives = 135/337 (40%), Gaps = 58/337 (17%)

Query: 89   PEPFPLPTEASIVKAA--AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKD 146
            P+  P  ++  I K A  +G  H +A+T+ G+V++WG  E        G L  G  +  D
Sbjct: 3088 PKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGE-------DGKLGHGNCISLD 3140

Query: 147  VFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGR--GSGEEGSKRRRISLAKQTAESSSSG 204
              +      ++++   +  S  S   +S  +    G GE G                  G
Sbjct: 3141 KPKLIEVLKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRL--------------GHG 3186

Query: 205  DENLSAFPCLVTLNPGVRIATVAAGGR--HTLALSDIGQVWGWGYGGEGQLGLGSRIRMV 262
            D      P LV    G R+  VA G R   T+AL+  G V+ WG G  G+LG G      
Sbjct: 3187 DTITQTRPKLVQALIGHRVVQVACGSRDAQTMALTTDGYVYSWGDGDFGKLGRG------ 3240

Query: 263  SSPHPIPCIESSYGKDRSAA-LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
                         G D     L    +N+ G         V  + CG + S  +T  G +
Sbjct: 3241 -------------GSDGCYTPLLVDRLNNLG---------VIQVECGAQFSLALTKYGEV 3278

Query: 322  LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             T+G G Y + G G+      P  V  L G +I  VA G  H + ++  G VYA+G N  
Sbjct: 3279 WTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDH 3338

Query: 382  GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
            GQ G G       P L+    LE+     VSCG+ H+
Sbjct: 3339 GQQGNGTTSVNRKPSLVH--DLEDARVNRVSCGSSHS 3373



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 102/218 (46%), Gaps = 29/218 (13%)

Query: 226  VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
            +A G +    +S  G+++  G G  G+LGLG    M   P  IP +           + +
Sbjct: 3050 IAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDDNNMCE-PKAIPFLSQ-------FVIKK 3101

Query: 286  GSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNC 345
             +V+S                 GG+H+  +T  G + ++G G  G+ G G+      P  
Sbjct: 3102 VAVHS-----------------GGKHALALTQDGKVFSWGEGEDGKLGHGNCISLDKPKL 3144

Query: 346  VSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLEN 405
            +  L   +I  +A G  H+  I+S+G++Y +G  ++G+LG G    +T P+L+ A  L  
Sbjct: 3145 IEVLKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDTITQTRPKLVQA--LIG 3202

Query: 406  VHSKSVSCGAR--HTAVIADDGKVFCWGWNKYGQLGLG 441
                 V+CG+R   T  +  DG V+ WG   +G+LG G
Sbjct: 3203 HRVVQVACGSRDAQTMALTTDGYVYSWGDGDFGKLGRG 3240



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 51/164 (31%), Positives = 88/164 (53%), Gaps = 5/164 (3%)

Query: 305  IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA--AGLW 362
            IA G +   +++  G L   G G  G+ G G  ++   P  +  L    I+ VA  +G  
Sbjct: 3050 IAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDDNNMCEPKAIPFLSQFVIKKVAVHSGGK 3109

Query: 363  HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIA 422
            H + ++ DG V+++G  + G+LG G   +   P+L++   L++   + ++CG+ H+A IA
Sbjct: 3110 HALALTQDGKVFSWGEGEDGKLGHGNCISLDKPKLIEV--LKSKRIRDIACGSGHSAAIA 3167

Query: 423  DDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
             +G+++ WG  +YG+LG GD I +  P  V  + G     VACG
Sbjct: 3168 SNGELYTWGLGEYGRLGHGDTITQTRPKLVQALIGHRVVQVACG 3211



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 83/347 (23%), Positives = 132/347 (38%), Gaps = 66/347 (19%)

Query: 25   PQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDD--LGQSYVTS 82
            P+  P LS  V++         +     G   A+A++   K+ +WG  +D  LG     S
Sbjct: 3088 PKAIPFLSQFVIK---------KVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNCIS 3138

Query: 83   GKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTG 142
                + P+   +     I   A G  H  A+   GE+YTWG  E       +G L  G  
Sbjct: 3139 L---DKPKLIEVLKSKRIRDIACGSGHSAAIASNGELYTWGLGE-------YGRLGHGDT 3188

Query: 143  LDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTA 198
            + +   +   + +  +V   +  SR +   +  TDG     G G+ G   R         
Sbjct: 3189 ITQTRPKLVQALIGHRVVQVACGSRDAQTMALTTDGYVYSWGDGDFGKLGR--------- 3239

Query: 199  ESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR 258
                 G  +    P LV     + +  V  G + +LAL+  G+VW WG G   +LG G+ 
Sbjct: 3240 -----GGSDGCYTPLLVDRLNNLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGN- 3293

Query: 259  IRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDA 318
                   H +          R   L  G          + G  +  +A G  H   +TD 
Sbjct: 3294 ------DHHV----------RKPTLVEG----------LRGKKIIHVAVGALHCLAVTDT 3327

Query: 319  GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTI 365
            G +  +G   +GQ G G+T     P+ V  L   ++  V+ G  H+I
Sbjct: 3328 GQVYAWGDNDHGQQGNGTTSVNRKPSLVHDLEDARVNRVSCGSSHSI 3374



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 63/104 (60%), Gaps = 3/104 (2%)

Query: 363 HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIA 422
           H + ++ DG VY++G    G+LG G   +   P+L++A   +N+    ++CG+ ++A ++
Sbjct: 579 HYLALTQDGCVYSWGNGDGGRLGHGDTISYDEPKLIEALLEKNI--IFIACGSTYSAALS 636

Query: 423 DDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
            +G+++ WG   YG+LG G+  D   P+ V T++G    +VACG
Sbjct: 637 ANGELYTWGRGNYGRLGHGNFDDVMTPTLVTTLKGHTVVHVACG 680



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 64/129 (49%), Gaps = 4/129 (3%)

Query: 346  VSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLEN 405
            +S L  I I G +  L+    +S +G +YA G    G+LG G D     P+ +   S   
Sbjct: 3042 LSKLKPIHIAGGSKTLF---IVSQEGKLYACGEGTNGRLGLGDDNNMCEPKAIPFLSQFV 3098

Query: 406  VHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVAC 464
            +   +V  G +H   +  DGKVF WG  + G+LG G+ I  + P  +  ++    R++AC
Sbjct: 3099 IKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNCISLDKPKLIEVLKSKRIRDIAC 3158

Query: 465  GWWHTLLLA 473
            G  H+  +A
Sbjct: 3159 GSGHSAAIA 3167



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 66/125 (52%), Gaps = 4/125 (3%)

Query: 346  VSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLEN 405
            +S+L  IQ+ G    L+    +++DG +Y+ G    G+LG GG  +  +P LL++     
Sbjct: 4024 LSALRPIQLAGGEQTLF---AVTADGKIYSTGYGAAGRLGIGGTDSVMIPTLLESIQHVF 4080

Query: 406  VHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVAC 464
            +   +VS G +H   ++ +G V+ WG    G+LG G+ +  + P  +  + G    ++AC
Sbjct: 4081 IKKVAVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVSYDRPKLIEDLLGVEIVDIAC 4140

Query: 465  GWWHT 469
            G  H+
Sbjct: 4141 GGHHS 4145



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 121/301 (40%), Gaps = 56/301 (18%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFL-TEQV 159
            V  ++G  HC+A++  G VY+WG  +        G L  G  +  D  +     L  E V
Sbjct: 4084 VAVSSGGKHCIALSSEGHVYSWGEGD-------DGKLGHGNKVSYDRPKLIEDLLGVEIV 4136

Query: 160  SPRSQVSRSSGGTSSG---TDGRGS-GEEGSKRRRISLAKQTAESSSSGDENLSAFPCLV 215
                    S+  TS+G   T G+G  G  G                  GD +    P +V
Sbjct: 4137 DIACGGHHSAAITSAGWLYTWGKGRYGRLGH-----------------GDSDDQLRPKVV 4179

Query: 216  TLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLG----SRIRM-VSSPHPI 268
                  ++  VA  +G   TL ++D   VW WG G  G+LG G     ++ + + S   +
Sbjct: 4180 EALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGL 4239

Query: 269  PCIESSYGKDRSAALSR-GSVNSEGPG------------FRVP-------GNYVKGIACG 308
              ++   G   S AL+R G+V + G G             R P       G  +  IA G
Sbjct: 4240 GVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATG 4299

Query: 309  GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICIS 368
              H    +D G + T+G    GQ G G+T     P  V +L G +I  VA G  HT+  S
Sbjct: 4300 SLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHALQGKKITRVACGSAHTLAWS 4359

Query: 369  S 369
            +
Sbjct: 4360 T 4360



 Score = 40.8 bits (94), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 8/92 (8%)

Query: 37   RLPLTVGS-AWRDVCGGGCG--FAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEP 91
            ++PL + S A   V    CG  F++A++ S  + TWG  D   LG     +  H   P  
Sbjct: 4228 KVPLKIDSLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHG---TDDHVRRPRK 4284

Query: 92   FPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
                    I+  A G  HCVA ++ GEV+TWG
Sbjct: 4285 VAALQGKKIISIATGSLHCVACSDKGEVFTWG 4316


>gi|327277952|ref|XP_003223727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Anolis carolinensis]
          Length = 1052

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 112/249 (44%), Gaps = 30/249 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  HTL L+D GQV+ WG+  +GQLGL         P  I  +           
Sbjct: 86  IVAVSCGEAHTLTLNDKGQVYAWGFAADGQLGLPGTEEYTRVPRNIKSLSDVQ------- 138

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDEL 341
                              +  +ACG  HS  ++    + ++G   +GQ G G     + 
Sbjct: 139 -------------------IVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLKKQT 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  + SLLGI    +AAG  H+  ++  G V+ +G N+FGQLG   +    +P LL   
Sbjct: 180 SPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDRYVPNLL--K 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL +     +SCG  HTA +  +G VF +G   YGQLG         P +V  + G +  
Sbjct: 238 SLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHEINPRKVFELMGNIVT 297

Query: 461 NVACGWWHT 469
            +ACG  HT
Sbjct: 298 QIACGRQHT 306



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 83/266 (31%), Positives = 124/266 (46%), Gaps = 38/266 (14%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
           G E  +  P  +     V+I  VA G  H+LALS   +V+ WG    GQLGLG  ++  +
Sbjct: 120 GTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLKKQT 179

Query: 264 SPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLT 323
           SP     I+S  G                    +P      IA GG HS  +T +GA+  
Sbjct: 180 SPQ---LIKSLLG--------------------IP---FGQIAAGGAHSFALTLSGAV-- 211

Query: 324 FGWGL--YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
           FGWG   +GQ G    +D   PN + SL   +I  ++ G  HT  ++ +G V+ FG   +
Sbjct: 212 FGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGY 271

Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLGL 440
           GQLG      E  PR +    + N+ ++ ++CG +HT A +   G+++ +G    GQLG+
Sbjct: 272 GQLGHNSTGHEINPRKV-FELMGNIVTQ-IACGRQHTSAFVPSTGRIYSFGLGGNGQLGM 329

Query: 441 GDVIDRNIPSQVT-----IEGCVPRN 461
           G   +R  P  V        G +P N
Sbjct: 330 GSTSNRKSPFPVKGNFLPFNGQIPLN 355



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P   +  L   +  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG+   GQL
Sbjct: 61  NDLGQL--GHEKSRKRPEQVGALDAQNI--VAVSCGEAHTLTLNDKGQVYAWGFAADGQL 116

Query: 439 GLGDV-----IDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   ++      VACG++H+L L+
Sbjct: 117 GLPGTEEYTRVPRNIKSLSDVQIV---QVACGYYHSLALS 153



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 66/288 (22%), Positives = 115/288 (39%), Gaps = 57/288 (19%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  + ++D  ++  WG   D       + ++  +P      ++  IV+ A
Sbjct: 84  QNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLGLPGTEEYTRVPRNIKSLSDVQIVQVA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G+ H +A+++G EV++WG  +        G L  G  L K            Q SP  Q
Sbjct: 144 CGYYHSLALSKGSEVFSWGQNK-------HGQLGLGYDLKK------------QTSP--Q 182

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLA-------KQTAESSSSGDENLSAFPCLVTL 217
           + +S  G   G    G    G+    ++L+       +         DEN    P L+  
Sbjct: 183 LIKSLLGIPFGQIAAG----GAHSFALTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 218 NPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG----------------LGSRIRM 261
               +I  ++ G  HT AL+  G V+ +G GG GQLG                +G+ +  
Sbjct: 239 LRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHEINPRKVFELMGNIVTQ 298

Query: 262 VS--SPHPIPCIES-----SYGKDRSAALSRGSVNSEGPGFRVPGNYV 302
           ++    H    + S     S+G   +  L  GS ++    F V GN++
Sbjct: 299 IACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGSTSNRKSPFPVKGNFL 346


>gi|390359737|ref|XP_003729552.1| PREDICTED: E3 ubiquitin-protein ligase HERC2, partial
            [Strongylocentrotus purpuratus]
          Length = 4064

 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 97/314 (30%), Positives = 138/314 (43%), Gaps = 82/314 (26%)

Query: 212  PCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP 269
            P L+     V I  VA  +GG+H LALS  G+V+ WG G +G+LG G+R +    P    
Sbjct: 3257 PTLLESIQHVHIKKVAVNSGGKHALALSVEGEVYSWGEGEDGKLGHGNRTQ-CDRPR--- 3312

Query: 270  CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
             IES  GK+                       V  IACGG HSA +T +G L T+G G Y
Sbjct: 3313 VIESLRGKE-----------------------VIDIACGGAHSACVTSSGELYTWGKGRY 3349

Query: 330  GQCGQGSTDDELSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTG 387
            G+ G G ++D+L P    +L G ++  VA  +G   T+CIS D +V+++G   +G+LG G
Sbjct: 3350 GRLGHGDSEDQLRPKMADALKGYRVIDVACGSGDSQTLCISDDDNVWSWGDGDYGKLGRG 3409

Query: 388  GDQAETLPRLLDAPS--------------------------------------------- 402
            G     +P+ +DA S                                             
Sbjct: 3410 GSDGCKVPQKVDALSSIGVCKVECGSQFSIALTKSGCVYTWGKGDYHRLGHGSDDHVRRP 3469

Query: 403  -----LENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEG 456
                 L+     S++ G+ H    +D G+V+ WG N  GQLG G       P  VT ++ 
Sbjct: 3470 RKVAALQGKKIISIATGSLHCVACSDQGEVYTWGDNDEGQLGDGTTNAIQRPRIVTALQD 3529

Query: 457  CVPRNVACGWWHTL 470
                NVACG  HT+
Sbjct: 3530 KKITNVACGSAHTV 3543



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 123/306 (40%), Gaps = 88/306 (28%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GGRH +AL+  G+V+ WG G +G+LG  SR+                     
Sbjct: 2293 VKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHLSRM--------------------- 2331

Query: 281  AALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
                    N E P     +    ++ IACG  HSA +T +G L T+G G YG+ G G + 
Sbjct: 2332 --------NCEKPRLLEALKTKRIRDIACGSSHSAAVTSSGELYTWGLGEYGRLGHGDST 2383

Query: 339  DELSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQL------------ 384
             +L P  V +L+G ++  VA G     T+ ++ +G VY++G   FG+L            
Sbjct: 2384 TQLRPKLVKALVGKRVIQVACGSRDAQTLTLTDEGMVYSWGDGDFGKLGRGGSEGCSVPH 2443

Query: 385  ----------------------------------------GTGGDQAETLPRLLDAPSLE 404
                                                    G G D     P++  A  L+
Sbjct: 2444 NVERLNGQGVIQIECGAQFSLALTKAGQVWTWGKGDYFRLGHGTDSHVRKPQV--AEGLK 2501

Query: 405  NVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVA 463
                  V+ GA H   + D G+VF WG N +GQ G G       P+ V  +EG     VA
Sbjct: 2502 GKKIIHVAVGALHCLAVTDTGQVFAWGDNDHGQQGDGSTTVNKKPALVQGLEGVRITRVA 2561

Query: 464  CGWWHT 469
            CG  H+
Sbjct: 2562 CGSSHS 2567



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 113/427 (26%), Positives = 171/427 (40%), Gaps = 69/427 (16%)

Query: 4    EGQEEKMERVVFMWGYL-------PGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGF 56
             G   +++  VF+WG         P     ++P+L+  +  L +         C GG   
Sbjct: 2198 HGGSREIQTKVFVWGLNDKDQLGGPRGSKIKTPVLNEFLSSLKVVC-------CAGGSKS 2250

Query: 57   AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA--AGWAHCVAVT 114
               ++   K+   G   + G+  + S ++ +IP+     ++  + K A  +G  H +A+T
Sbjct: 2251 LFVVTAEGKVYACGEGTN-GRLGLGSSQNVDIPKQVNGLSQYVVKKVAVHSGGRHAMALT 2309

Query: 115  EGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSS 174
              G+V++WG  +    G+  G LS        + E   +     ++  S  S S+  TSS
Sbjct: 2310 VDGKVFSWGEGD---DGK-LGHLSRMNCEKPRLLEALKTKRIRDIACGS--SHSAAVTSS 2363

Query: 175  GTDGR-GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGR-- 231
            G     G GE G                  GD      P LV    G R+  VA G R  
Sbjct: 2364 GELYTWGLGEYGRL--------------GHGDSTTQLRPKLVKALVGKRVIQVACGSRDA 2409

Query: 232  HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
             TL L+D G V+ WG G  G+LG G      S PH +                       
Sbjct: 2410 QTLTLTDEGMVYSWGDGDFGKLGRGGS-EGCSVPHNVE---------------------- 2446

Query: 292  GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                R+ G  V  I CG + S  +T AG + T+G G Y + G G+      P     L G
Sbjct: 2447 ----RLNGQGVIQIECGAQFSLALTKAGQVWTWGKGDYFRLGHGTDSHVRKPQVAEGLKG 2502

Query: 352  IQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSV 411
             +I  VA G  H + ++  G V+A+G N  GQ G G       P L+    LE V    V
Sbjct: 2503 KKIIHVAVGALHCLAVTDTGQVFAWGDNDHGQQGDGSTTVNKKPALVQG--LEGVRITRV 2560

Query: 412  SCGARHT 418
            +CG+ H+
Sbjct: 2561 ACGSSHS 2567



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 123/247 (49%), Gaps = 35/247 (14%)

Query: 209  SAFPCLVTLNPGVRIATVAAGGRHTL-ALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHP 267
            +A   L +L P ++I     GG  TL A++  G+++  GYG  G+LG+G     VS+P  
Sbjct: 3206 TAIESLTSLRP-IQIV----GGEQTLFAVTADGKLYATGYGASGRLGIGG-TDSVSTPTL 3259

Query: 268  IPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWG 327
            +  I+  + K       + +VNS                 GG+H+  ++  G + ++G G
Sbjct: 3260 LESIQHVHIK-------KVAVNS-----------------GGKHALALSVEGEVYSWGEG 3295

Query: 328  LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG 387
              G+ G G+      P  + SL G ++  +A G  H+ C++S G++Y +G  ++G+LG G
Sbjct: 3296 EDGKLGHGNRTQCDRPRVIESLRGKEVIDIACGGAHSACVTSSGELYTWGKGRYGRLGHG 3355

Query: 388  GDQAETLPRLLDAPSLENVHSKSVSCGA--RHTAVIADDGKVFCWGWNKYGQLGLGDVID 445
              + +  P++ DA  L+      V+CG+    T  I+DD  V+ WG   YG+LG G    
Sbjct: 3356 DSEDQLRPKMADA--LKGYRVIDVACGSGDSQTLCISDDDNVWSWGDGDYGKLGRGGSDG 3413

Query: 446  RNIPSQV 452
              +P +V
Sbjct: 3414 CKVPQKV 3420



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 96/225 (42%), Gaps = 45/225 (20%)

Query: 204  GDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
            GD      P +     G R+  VA  +G   TL +SD   VW WG G  G+LG G     
Sbjct: 3355 GDSEDQLRPKMADALKGYRVIDVACGSGDSQTLCISDDDNVWSWGDGDYGKLGRG----- 3409

Query: 262  VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNY-------VKGIACGGRHSAV 314
                          G D               G +VP          V  + CG + S  
Sbjct: 3410 --------------GSD---------------GCKVPQKVDALSSIGVCKVECGSQFSIA 3440

Query: 315  ITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVY 374
            +T +G + T+G G Y + G GS D    P  V++L G +I  +A G  H +  S  G+VY
Sbjct: 3441 LTKSGCVYTWGKGDYHRLGHGSDDHVRRPRKVAALQGKKIISIATGSLHCVACSDQGEVY 3500

Query: 375  AFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
             +G N  GQLG G   A   PR++ A  L++    +V+CG+ HT 
Sbjct: 3501 TWGDNDEGQLGDGTTNAIQRPRIVTA--LQDKKITNVACGSAHTV 3543



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 113/254 (44%), Gaps = 41/254 (16%)

Query: 212  PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
            P L      +++   A G +    ++  G+V+  G G  G+LGLGS  + V  P  +  +
Sbjct: 2230 PVLNEFLSSLKVVCCAGGSKSLFVVTAEGKVYACGEGTNGRLGLGSS-QNVDIPKQVNGL 2288

Query: 272  ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
             S Y   + A  S                       GGRH+  +T  G + ++G G  G+
Sbjct: 2289 -SQYVVKKVAVHS-----------------------GGRHAMALTVDGKVFSWGEGDDGK 2324

Query: 332  CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
             G  S  +   P  + +L   +I  +A G  H+  ++S G++Y +G  ++G+LG G    
Sbjct: 2325 LGHLSRMNCEKPRLLEALKTKRIRDIACGSSHSAAVTSSGELYTWGLGEYGRLGHGDSTT 2384

Query: 392  ETLPRLLDAPSLENVHSKSVSCGAR--HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIP 449
            +  P+L+ A  L       V+CG+R   T  + D+G V+ WG   +G+LG G        
Sbjct: 2385 QLRPKLVKA--LVGKRVIQVACGSRDAQTLTLTDEGMVYSWGDGDFGKLGRGGS------ 2436

Query: 450  SQVTIEGC-VPRNV 462
                 EGC VP NV
Sbjct: 2437 -----EGCSVPHNV 2445



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 78/151 (51%), Gaps = 7/151 (4%)

Query: 324  FGWGL--YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
            +GWG    GQ G         P  + SL  ++   +  G      +++DG +YA G    
Sbjct: 3184 YGWGHNHRGQLGGIEGAKVKVPTAIESLTSLRPIQIVGGEQTLFAVTADGKLYATGYGAS 3243

Query: 382  GQLGTGGDQAETLPRLLDAPSLENVHSK--SVSCGARHTAVIADDGKVFCWGWNKYGQLG 439
            G+LG GG  + + P LL+  S+++VH K  +V+ G +H   ++ +G+V+ WG  + G+LG
Sbjct: 3244 GRLGIGGTDSVSTPTLLE--SIQHVHIKKVAVNSGGKHALALSVEGEVYSWGEGEDGKLG 3301

Query: 440  LGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
             G+    + P  + ++ G    ++ACG  H+
Sbjct: 3302 HGNRTQCDRPRVIESLRGKEVIDIACGGAHS 3332



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 57/112 (50%), Gaps = 9/112 (8%)

Query: 336 STDDELSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAET 393
           ++DD+L+P  VS L   +   +A G     T+ ++  G +++FG   +G+LG GG     
Sbjct: 1   NSDDQLTPKLVSGLKEQKFVHIALGSNDGQTLAVTDTGLLFSFGNGDYGKLGRGGSDGCK 60

Query: 394 LPRLLDAPSLENVHSKSVSCGARHTAVIADDGKV-----FCWGWNKYGQLGL 440
           LP+L+D   L+  H+    CG + + ++   G V     F W  + +  +GL
Sbjct: 61  LPKLVD--KLQGQHAVIACCGNQFSVILTKTGTVYTCLTFAWTSSAHWSVGL 110


>gi|427782019|gb|JAA56461.1| Putative hect e3 ubiquitin ligase hect e3 ubiquitin ligase
           [Rhipicephalus pulchellus]
          Length = 1480

 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/223 (34%), Positives = 116/223 (52%), Gaps = 31/223 (13%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++   V +GG+H LALS  G+V+ WG G +G+LG G++    SS      IES  GK+  
Sbjct: 668 IKKVVVNSGGKHCLALSAEGEVYSWGEGDDGKLGHGNK----SSCERPRVIESLRGKE-- 721

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                V  +ACGG HSA IT +G L T+G G YG+ G G +DD+
Sbjct: 722 ---------------------VVDVACGGAHSACITASGELYTWGKGRYGRLGHGDSDDQ 760

Query: 341 LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           L P  V +L G ++  VA  +G   T+C++ D  V+++G   +G+LG GG     +P  +
Sbjct: 761 LRPKKVEALSGWRVRCVACGSGDAQTLCVTDDDCVWSWGDGDYGKLGRGGSDGCKVPLRV 820

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
           D   L+ +    V CG++ +  +   G V+ WG   Y +LG G
Sbjct: 821 DL--LQGMGVIRVECGSQFSVALTASGSVYTWGKGDYHRLGHG 861



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 93/320 (29%), Positives = 134/320 (41%), Gaps = 50/320 (15%)

Query: 101 VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
           V   +G  HC+A++  GEVY+WG  +         D   G G +K   ER    + E + 
Sbjct: 671 VVVNSGGKHCLALSAEGEVYSWGEGD---------DGKLGHG-NKSSCERPR--VIESLR 718

Query: 161 PRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPG 220
            +  V  + GG  S      SGE        +  K        GD +    P  V    G
Sbjct: 719 GKEVVDVACGGAHSACIT-ASGE------LYTWGKGRYGRLGHGDSDDQLRPKKVEALSG 771

Query: 221 VRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
            R+  VA  +G   TL ++D   VW WG G  G+LG G                   G D
Sbjct: 772 WRVRCVACGSGDAQTLCVTDDDCVWSWGDGDYGKLGRG-------------------GSD 812

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
                 R  +        + G  V  + CG + S  +T +G++ T+G G Y + G G+ D
Sbjct: 813 GCKVPLRVDL--------LQGMGVIRVECGSQFSVALTASGSVYTWGKGDYHRLGHGTDD 864

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
               P  V++L G ++  +A G  H +  +  G+VY +G N  GQLG G   A   PRL+
Sbjct: 865 HVRRPKRVAALQGKKVICIAVGSLHCVACTDTGEVYTWGDNDEGQLGDGTVNAIHKPRLV 924

Query: 399 DAPSLENVHSKSVSCGARHT 418
            A  L+      VSCG+ HT
Sbjct: 925 AA--LQGKKINRVSCGSAHT 942



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 73/232 (31%), Positives = 112/232 (48%), Gaps = 38/232 (16%)

Query: 240 GQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRV 297
           G + GWG+   GQLG   G+++++     P+PC           ALS           R 
Sbjct: 581 GTILGWGHNHRGQLGGVEGAKVKL-----PMPC----------EALS---------ALR- 615

Query: 298 PGNYVKGIACGGRHSAV-ITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG 356
           P   V     GG  +   +T  G +   G+G  G+ G G TD    P  + SL  + I+ 
Sbjct: 616 PIQVV-----GGEQTLFAVTADGKVYATGYGAGGRLGIGGTDSVSCPTLLESLQHVFIKK 670

Query: 357 VA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
           V   +G  H + +S++G+VY++G    G+LG G   +   PR+++  SL       V+CG
Sbjct: 671 VVVNSGGKHCLALSAEGEVYSWGEGDDGKLGHGNKSSCERPRVIE--SLRGKEVVDVACG 728

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
             H+A I   G+++ WG  +YG+LG GD  D+  P +V  + G   R VACG
Sbjct: 729 GAHSACITASGELYTWGKGRYGRLGHGDSDDQLRPKKVEALSGWRVRCVACG 780



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 86/328 (26%), Positives = 123/328 (37%), Gaps = 59/328 (17%)

Query: 49  VCGGGCGFAMAISDSRKLITWGSTDD--LGQSYVTSGKHGEIPEPFPLPTEASIVKAAAG 106
           V   G    +A+S   ++ +WG  DD  LG    +S +   + E         +V  A G
Sbjct: 672 VVNSGGKHCLALSAEGEVYSWGEGDDGKLGHGNKSSCERPRVIESL---RGKEVVDVACG 728

Query: 107 WAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVS 166
            AH   +T  GE+YTWG       GR +G L  G   D  +  ++   L+          
Sbjct: 729 GAHSACITASGELYTWG------KGR-YGRLGHGDS-DDQLRPKKVEALSGWRVRCVACG 780

Query: 167 RSSGGTSSGTDGR-----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGV 221
                T   TD       G G+ G   R              G  +    P  V L  G+
Sbjct: 781 SGDAQTLCVTDDDCVWSWGDGDYGKLGR--------------GGSDGCKVPLRVDLLQGM 826

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
            +  V  G + ++AL+  G V+ WG G   +LG G+    V  P             R A
Sbjct: 827 GVIRVECGSQFSVALTASGSVYTWGKGDYHRLGHGTDDH-VRRPK------------RVA 873

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL 341
           AL               G  V  IA G  H    TD G + T+G    GQ G G+ +   
Sbjct: 874 ALQ--------------GKKVICIAVGSLHCVACTDTGEVYTWGDNDEGQLGDGTVNAIH 919

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISS 369
            P  V++L G +I  V+ G  HT+  S+
Sbjct: 920 KPRLVAALQGKKINRVSCGSAHTVAWST 947



 Score = 43.5 bits (101), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 82/158 (51%), Gaps = 11/158 (6%)

Query: 318 AGALLTFGWGLYGQCG--QGSTDDELSP-NCVSSLLGIQIEGVAAGLWHTICISSDGDVY 374
           +G +L +G    GQ G  +G+      P   +S+L  IQ+ G    L+    +++DG VY
Sbjct: 580 SGTILGWGHNHRGQLGGVEGAKVKLPMPCEALSALRPIQVVGGEQTLF---AVTADGKVY 636

Query: 375 AFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS--VSCGARHTAVIADDGKVFCWGW 432
           A G    G+LG GG  + + P LL+  SL++V  K   V+ G +H   ++ +G+V+ WG 
Sbjct: 637 ATGYGAGGRLGIGGTDSVSCPTLLE--SLQHVFIKKVVVNSGGKHCLALSAEGEVYSWGE 694

Query: 433 NKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
              G+LG G+      P  + ++ G    +VACG  H+
Sbjct: 695 GDDGKLGHGNKSSCERPRVIESLRGKEVVDVACGGAHS 732


>gi|75076912|sp|Q4R828.1|RCCD1_MACFA RecName: Full=RCC1 domain-containing protein 1
 gi|67968774|dbj|BAE00744.1| unnamed protein product [Macaca fascicularis]
          Length = 376

 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 116/246 (47%), Gaps = 45/246 (18%)

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFR--VPGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
           E+  G+      +R  V+   P +R   P    + +  G  H+ ++  AG + ++G G +
Sbjct: 128 EAQIGRLPLLPCARAYVSPRPPFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGGGRH 187

Query: 330 GQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLG---- 385
           GQ G G+ + EL P  + +L G+ +  VAAG WH++C+S  GD+Y +G N+ GQL     
Sbjct: 188 GQLGHGTLEAELEPRLLEALQGLTMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTR 247

Query: 386 -------------TGGDQ---------------------AETLPRLLDAPSLENVHSKSV 411
                        TG ++                      +  P LLD P   +  +  V
Sbjct: 248 NLAEDGETVAREATGLNEDGSQVKRTGRVEDGAPAPFIAVQPFPALLDLPLGSD--AVKV 305

Query: 412 SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI---EGCVPRNVACGWWH 468
           SCG+RHTAV+   G+++ WGW KYGQLG  D    + P +V     +    + V CG W+
Sbjct: 306 SCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDWPRRVEYFVDKQLQVKAVTCGPWN 365

Query: 469 TLLLAV 474
           T + AV
Sbjct: 366 TYVYAV 371



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 80/173 (46%), Gaps = 15/173 (8%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P L+    G+ +A VAAGG H++ +S+ G ++ WG+   GQL L +R  +      +   
Sbjct: 201 PRLLEALQGLTMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTR-NLAEDGETVARE 259

Query: 272 ESSYGKDRSAALSRGSVNSEGPG-----------FRVP-GNYVKGIACGGRHSAVITDAG 319
            +   +D S     G V    P              +P G+    ++CG RH+AV+T  G
Sbjct: 260 ATGLNEDGSQVKRTGRVEDGAPAPFIAVQPFPALLDLPLGSDAVKVSCGSRHTAVVTRTG 319

Query: 320 ALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG--IQIEGVAAGLWHTICISSD 370
            L T+GWG YGQ G   T     P  V   +   +Q++ V  G W+T   + +
Sbjct: 320 ELYTWGWGKYGQLGHEDTTSLDWPRRVEYFVDKQLQVKAVTCGPWNTYVYAVE 372



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 87/207 (42%), Gaps = 44/207 (21%)

Query: 53  GCGFAMAISDSRKLITWG--STDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
           G   A+ +  + ++ +WG      LG   + +     + E     T A +  AA GW H 
Sbjct: 166 GAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLTMAEV--AAGGW-HS 222

Query: 111 VAVTEGGEVYTWGWKECVPSGRVFGDLSTGT---GLDKDVFERQSSFLTEQVSPRSQVSR 167
           V V+E G++Y WGW E        G L+  T     D +   R+++ L E     SQV R
Sbjct: 223 VCVSETGDIYIWGWNES-------GQLALPTRNLAEDGETVAREATGLNED---GSQVKR 272

Query: 168 SSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVA 227
           +           G  E+G+    I++                 FP L+ L  G     V+
Sbjct: 273 T-----------GRVEDGAPAPFIAV---------------QPFPALLDLPLGSDAVKVS 306

Query: 228 AGGRHTLALSDIGQVWGWGYGGEGQLG 254
            G RHT  ++  G+++ WG+G  GQLG
Sbjct: 307 CGSRHTAVVTRTGELYTWGWGKYGQLG 333


>gi|449673459|ref|XP_002164132.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Hydra
            magnipapillata]
          Length = 2284

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 89/305 (29%), Positives = 133/305 (43%), Gaps = 82/305 (26%)

Query: 220  GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
             ++  +V +GGRH LALS  G+V+ WG G +G+LG G+R +  S P  I           
Sbjct: 1528 NIKKISVHSGGRHCLALSSDGEVFSWGEGEDGKLGHGNR-QTSSQPKRIEFF-------- 1578

Query: 280  SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDD 339
                               G  +  I  GG HSA I   G L T+G G YG+ G G +DD
Sbjct: 1579 ------------------CGKIITNICAGGSHSAAIGLNGELYTWGKGRYGRLGHGDSDD 1620

Query: 340  ELSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
            +L P  V +L    +  VA  +G   T+CI++D +V+++G   +G+LG GG     +P +
Sbjct: 1621 QLKPKQVEALQFFFVLDVACGSGDAQTLCITNDDNVWSWGDGDYGKLGRGGSDGCKVPMI 1680

Query: 398  LD--------------------------------------------------APSLENVH 407
            ++                                                    +L N  
Sbjct: 1681 IEDLSGKGIVKVECGSQFSMALTKYGVLYTWGKGDYYRLGHGTEEHVRRPMMVTALFNKI 1740

Query: 408  SKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT--IEGCVPRNVACG 465
              S+SCG+ H  V  D+G+V+CWG N  GQLG G +I R  P+  T  +   + R ++CG
Sbjct: 1741 VTSISCGSLHCVVCTDEGEVYCWGDNDEGQLGDGTIIARQTPTLNTFLLNKKIDR-ISCG 1799

Query: 466  WWHTL 470
              HT+
Sbjct: 1800 SAHTI 1804



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 90/290 (31%), Positives = 136/290 (46%), Gaps = 34/290 (11%)

Query: 212 PCLVT-LNPG-VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP 269
           P LVT LN   V   +V +GG H +AL+  G  + WG G  GQLG G+ +   S PH I 
Sbjct: 635 PRLVTGLNQLIVTKVSVHSGGNHVMALTSDGLAFSWGDGENGQLGHGN-LMSCSKPHLIE 693

Query: 270 CI------ESSYGKDRSAALSRGSV---------------NSEG---PGF--RVPGNYVK 303
                   + S G   SAA+                    + E    P F     G  V 
Sbjct: 694 AFVGKIVTDISCGSAHSAAIVENKYLYTWGLGDFGRLGHGDEETILQPKFVTHFLGYNVV 753

Query: 304 GIACGGR--HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
            ++CG R   +  ITD   + ++G G +G+ G+G ++  L P  V  L G+QI  +  G 
Sbjct: 754 QVSCGSRDAQTVCITDDDKVWSWGDGDFGKLGRGGSERCLIPVEVEQLRGLQICKILCGA 813

Query: 362 WHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
             T+ ++  G V+ +G   F +LG G D     P+L++   L   H   ++ GA H   +
Sbjct: 814 QFTVALTKTGTVWTWGKGDFYRLGHGTDIHVRQPKLVEG--LRGKHVIDIAVGALHCLAV 871

Query: 422 ADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
             DG+VF WG N +GQLG G+   + +P+ +T +     + VACG  H++
Sbjct: 872 TQDGEVFSWGDNDHGQLGTGETDVKKVPNLITGLHNHRIKYVACGSSHSI 921



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 98/217 (45%), Gaps = 31/217 (14%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGR--HTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           GDE     P  VT   G  +  V+ G R   T+ ++D  +VW WG G  G+LG G   R 
Sbjct: 733 GDEETILQPKFVTHFLGYNVVQVSCGSRDAQTVCITDDDKVWSWGDGDFGKLGRGGSERC 792

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
           +     IP                  V  E    ++ G  +  I CG + +  +T  G +
Sbjct: 793 L-----IP------------------VEVE----QLRGLQICKILCGAQFTVALTKTGTV 825

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
            T+G G + + G G+      P  V  L G  +  +A G  H + ++ DG+V+++G N  
Sbjct: 826 WTWGKGDFYRLGHGTDIHVRQPKLVEGLRGKHVIDIAVGALHCLAVTQDGEVFSWGDNDH 885

Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
           GQLGTG    + +P L+    L N   K V+CG+ H+
Sbjct: 886 GQLGTGETDVKKVPNLITG--LHNHRIKYVACGSSHS 920



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 86/155 (55%), Gaps = 5/155 (3%)

Query: 314  VITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA--AGLWHTICISSDG 371
            + TD   +   G+G  GQ G G ++   SP  + S+  I I+ ++  +G  H + +SSDG
Sbjct: 1489 ITTDGALVFATGYGNNGQLGLGYSETVTSPRLLESIKHINIKKISVHSGGRHCLALSSDG 1548

Query: 372  DVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWG 431
            +V+++G  + G+LG G  Q  + P+ ++    + +   ++  G  H+A I  +G+++ WG
Sbjct: 1549 EVFSWGEGEDGKLGHGNRQTSSQPKRIEFFCGKII--TNICAGGSHSAAIGLNGELYTWG 1606

Query: 432  WNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
              +YG+LG GD  D+  P QV  ++     +VACG
Sbjct: 1607 KGRYGRLGHGDSDDQLKPKQVEALQFFFVLDVACG 1641



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 102/243 (41%), Gaps = 31/243 (12%)

Query: 204  GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
            G+   S+ P  +    G  I  + AGG H+ A+   G+++ WG G  G+LG G     + 
Sbjct: 1564 GNRQTSSQPKRIEFFCGKIITNICAGGSHSAAIGLNGELYTWGKGRYGRLGHGDSDDQLK 1623

Query: 264  SPHPIPCIESSYGKDRSA----ALSRGSVNSEG-----------------PGFRVP---- 298
             P  +  ++  +  D +     A +    N +                   G +VP    
Sbjct: 1624 -PKQVEALQFFFVLDVACGSGDAQTLCITNDDNVWSWGDGDYGKLGRGGSDGCKVPMIIE 1682

Query: 299  ---GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
               G  +  + CG + S  +T  G L T+G G Y + G G+ +    P  V++L    + 
Sbjct: 1683 DLSGKGIVKVECGSQFSMALTKYGVLYTWGKGDYYRLGHGTEEHVRRPMMVTALFNKIVT 1742

Query: 356  GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGA 415
             ++ G  H +  + +G+VY +G N  GQLG G   A   P L     L N     +SCG+
Sbjct: 1743 SISCGSLHCVVCTDEGEVYCWGDNDEGQLGDGTIIARQTPTL--NTFLLNKKIDRISCGS 1800

Query: 416  RHT 418
             HT
Sbjct: 1801 AHT 1803



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 115/265 (43%), Gaps = 29/265 (10%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P L      ++   +A G + T  +++ G+++  G    G+LG+G     V+SP  +  +
Sbjct: 582 PTLCDHLSSLQCKFIAGGSKSTFFITNKGKLYSCGESSFGKLGIGDITGNVTSPRLVTGL 641

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
                      +++ SV+S                 GG H   +T  G   ++G G  GQ
Sbjct: 642 -------NQLIVTKVSVHS-----------------GGNHVMALTSDGLAFSWGDGENGQ 677

Query: 332 CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
            G G+      P+ + + +G  +  ++ G  H+  I  +  +Y +G   FG+LG G ++ 
Sbjct: 678 LGHGNLMSCSKPHLIEAFVGKIVTDISCGSAHSAAIVENKYLYTWGLGDFGRLGHGDEET 737

Query: 392 ETLPRLLDAPSLENVHSKSVSCGAR--HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIP 449
              P+ +      NV    VSCG+R   T  I DD KV+ WG   +G+LG G      IP
Sbjct: 738 ILQPKFVTHFLGYNV--VQVSCGSRDAQTVCITDDDKVWSWGDGDFGKLGRGGSERCLIP 795

Query: 450 SQV-TIEGCVPRNVACGWWHTLLLA 473
            +V  + G     + CG   T+ L 
Sbjct: 796 VEVEQLRGLQICKILCGAQFTVALT 820



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 63/237 (26%), Positives = 104/237 (43%), Gaps = 29/237 (12%)

Query: 207  NLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPH 266
            + SA  C+  ++  ++   V          +D   V+  GYG  GQLGLG     V+SP 
Sbjct: 1461 HFSAEMCVKLIDNLLKEHNVKIDCDTVCITTDGALVFATGYGNNGQLGLGYS-ETVTSPR 1519

Query: 267  PIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGW 326
             +  I       +   + + SV+S                 GGRH   ++  G + ++G 
Sbjct: 1520 LLESI-------KHINIKKISVHS-----------------GGRHCLALSSDGEVFSWGE 1555

Query: 327  GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
            G  G+ G G+      P  +    G  I  + AG  H+  I  +G++Y +G  ++G+LG 
Sbjct: 1556 GEDGKLGHGNRQTSSQPKRIEFFCGKIITNICAGGSHSAAIGLNGELYTWGKGRYGRLGH 1615

Query: 387  GGDQAETLPRLLDAPSLENVHSKSVSCGA--RHTAVIADDGKVFCWGWNKYGQLGLG 441
            G    +  P+ ++A  L+      V+CG+    T  I +D  V+ WG   YG+LG G
Sbjct: 1616 GDSDDQLKPKQVEA--LQFFFVLDVACGSGDAQTLCITNDDNVWSWGDGDYGKLGRG 1670



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 80/317 (25%), Positives = 123/317 (38%), Gaps = 61/317 (19%)

Query: 57  AMAISDSRKLITWGSTDD--LGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVT 114
            MA++      +WG  ++  LG   + S     + E F       +   + G AH  A+ 
Sbjct: 658 VMALTSDGLAFSWGDGENGQLGHGNLMSCSKPHLIEAF---VGKIVTDISCGSAHSAAIV 714

Query: 115 EGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQ--SSFLTEQVSPRSQVSRSSGGT 172
           E   +YTWG  +       FG L  G G ++ + + +  + FL   V   S  SR +   
Sbjct: 715 ENKYLYTWGLGD-------FGRL--GHGDEETILQPKFVTHFLGYNVVQVSCGSRDAQTV 765

Query: 173 SSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAA 228
               D +    G G+ G   R              G       P  V    G++I  +  
Sbjct: 766 CITDDDKVWSWGDGDFGKLGR--------------GGSERCLIPVEVEQLRGLQICKILC 811

Query: 229 GGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSV 288
           G + T+AL+  G VW WG G   +LG G+ I +                 R   L  G  
Sbjct: 812 GAQFTVALTKTGTVWTWGKGDFYRLGHGTDIHV-----------------RQPKLVEG-- 852

Query: 289 NSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS 348
                   + G +V  IA G  H   +T  G + ++G   +GQ G G TD +  PN ++ 
Sbjct: 853 --------LRGKHVIDIAVGALHCLAVTQDGEVFSWGDNDHGQLGTGETDVKKVPNLITG 904

Query: 349 LLGIQIEGVAAGLWHTI 365
           L   +I+ VA G  H+I
Sbjct: 905 LHNHRIKYVACGSSHSI 921



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 59/108 (54%), Gaps = 2/108 (1%)

Query: 364  TICISSDGD-VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIA 422
            T+CI++DG  V+A G    GQLG G  +  T PRLL++    N+   SV  G RH   ++
Sbjct: 1486 TVCITTDGALVFATGYGNNGQLGLGYSETVTSPRLLESIKHINIKKISVHSGGRHCLALS 1545

Query: 423  DDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE-GCVPRNVACGWWHT 469
             DG+VF WG  + G+LG G+    + P ++    G +  N+  G  H+
Sbjct: 1546 SDGEVFSWGEGEDGKLGHGNRQTSSQPKRIEFFCGKIITNICAGGSHS 1593



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 69/151 (45%), Gaps = 4/151 (2%)

Query: 323 TFGWGL--YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
            F WGL    Q G        SP     L  +Q + +A G   T  I++ G +Y+ G + 
Sbjct: 560 VFMWGLNDKDQLGGLKGSKVKSPTLCDHLSSLQCKFIAGGSKSTFFITNKGKLYSCGESS 619

Query: 381 FGQLGTGGDQAE-TLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG 439
           FG+LG G      T PRL+   +   V   SV  G  H   +  DG  F WG  + GQLG
Sbjct: 620 FGKLGIGDITGNVTSPRLVTGLNQLIVTKVSVHSGGNHVMALTSDGLAFSWGDGENGQLG 679

Query: 440 LGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            G+++  + P  +    G +  +++CG  H+
Sbjct: 680 HGNLMSCSKPHLIEAFVGKIVTDISCGSAHS 710



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 75/314 (23%), Positives = 112/314 (35%), Gaps = 57/314 (18%)

Query: 58   MAISDSRKLITWGSTDD--LGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTE 115
            +A+S   ++ +WG  +D  LG     +      P+         I    AG +H  A+  
Sbjct: 1542 LALSSDGEVFSWGEGEDGKLGHGNRQTSSQ---PKRIEFFCGKIITNICAGGSHSAAIGL 1598

Query: 116  GGEVYTWGWKECVPSGRVFGDLSTGTGLD----KDVFERQSSFLTEQVSPRSQVSRSSGG 171
             GE+YTWG       GR +G L  G   D    K V   Q  F+ +              
Sbjct: 1599 NGELYTWG------KGR-YGRLGHGDSDDQLKPKQVEALQFFFVLDVACGSGDAQTLCIT 1651

Query: 172  TSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGR 231
                    G G+ G   R              G  +    P ++    G  I  V  G +
Sbjct: 1652 NDDNVWSWGDGDYGKLGR--------------GGSDGCKVPMIIEDLSGKGIVKVECGSQ 1697

Query: 232  HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
             ++AL+  G ++ WG G   +LG G+    V  P  +             AL    V S 
Sbjct: 1698 FSMALTKYGVLYTWGKGDYYRLGHGTE-EHVRRPMMV------------TALFNKIVTS- 1743

Query: 292  GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                         I+CG  H  V TD G +  +G    GQ G G+     +P   + LL 
Sbjct: 1744 -------------ISCGSLHCVVCTDEGEVYCWGDNDEGQLGDGTIIARQTPTLNTFLLN 1790

Query: 352  IQIEGVAAGLWHTI 365
             +I+ ++ G  HTI
Sbjct: 1791 KKIDRISCGSAHTI 1804



 Score = 38.5 bits (88), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 2/72 (2%)

Query: 372 DVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWG 431
           DV+ +G N   QLG         P L D   L ++  K ++ G++ T  I + GK++  G
Sbjct: 559 DVFMWGLNDKDQLGGLKGSKVKSPTLCD--HLSSLQCKFIAGGSKSTFFITNKGKLYSCG 616

Query: 432 WNKYGQLGLGDV 443
            + +G+LG+GD+
Sbjct: 617 ESSFGKLGIGDI 628



 Score = 38.5 bits (88), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 11/81 (13%)

Query: 49  VCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTE----ASIVK 102
           +C   CG  F +A++ +  + TWG  D     +   G   +I    P   E      ++ 
Sbjct: 806 ICKILCGAQFTVALTKTGTVWTWGKGD-----FYRLGHGTDIHVRQPKLVEGLRGKHVID 860

Query: 103 AAAGWAHCVAVTEGGEVYTWG 123
            A G  HC+AVT+ GEV++WG
Sbjct: 861 IAVGALHCLAVTQDGEVFSWG 881


>gi|301618542|ref|XP_002938670.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Xenopus
           (Silurana) tropicalis]
          Length = 1029

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/250 (31%), Positives = 121/250 (48%), Gaps = 27/250 (10%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  ++ G  H++A+SD G ++ WG G EGQLG G+      +P  I              
Sbjct: 86  IVDISCGTNHSVAVSDEGSIYSWGDGSEGQLGTGNLSSRNFTPKKI-------------- 131

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGS-TDDEL 341
              G  N++          +  I+CG  HS  +++ G + ++G    GQ G GS   ++ 
Sbjct: 132 --TGLFNTK----------IIQISCGNFHSLALSEDGRVFSWGQNKCGQLGLGSQIINQA 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           +P  V SL GI +  V AG   +  +S  G V+A+G N  GQLG   D  +   +     
Sbjct: 180 TPQLVKSLKGIPLVQVTAGGSQSFALSMSGTVFAWGKNNAGQLGFKSDPMKGTFKPHAVN 239

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRN 461
           SL N+    +SCG  HTAV++ DG V+ +G + +GQLG       ++P ++         
Sbjct: 240 SLRNLGVAYISCGEEHTAVLSKDGSVYTFGDDTHGQLGQNSGNQTSVPQKIEDYAGQVSQ 299

Query: 462 VACGWWHTLL 471
           VACG +HTLL
Sbjct: 300 VACGRYHTLL 309



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/222 (31%), Positives = 103/222 (46%), Gaps = 47/222 (21%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI------RMVSSPHPIPCIES 273
             +I  ++ G  H+LALS+ G+V+ WG    GQLGLGS+I      ++V S   IP ++ 
Sbjct: 136 NTKIIQISCGNFHSLALSEDGRVFSWGQNKCGQLGLGSQIINQATPQLVKSLKGIPLVQV 195

Query: 274 SYGKDRSAALSR-------GSVNSEGPGFR---VPGNY------------VKGIACGGRH 311
           + G  +S ALS        G  N+   GF+   + G +            V  I+CG  H
Sbjct: 196 TAGGSQSFALSMSGTVFAWGKNNAGQLGFKSDPMKGTFKPHAVNSLRNLGVAYISCGEEH 255

Query: 312 SAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDG 371
           +AV++  G++ TFG   +GQ GQ S +    P  +    G Q+  VA G +HT+      
Sbjct: 256 TAVLSKDGSVYTFGDDTHGQLGQNSGNQTSVPQKIEDYAG-QVSQVACGRYHTL------ 308

Query: 372 DVYAFGGNQFGQLGTG----------GDQAETLPRLLDAPSL 403
            +Y F  N+    G G           D+AE LP   D  SL
Sbjct: 309 -LYVFSCNRIVSFGKGSLRPQDNTECSDEAE-LPSEFDISSL 348


>gi|114321835|ref|YP_743518.1| regulator of chromosome condensation, RCC1 [Alkalilimnicola
           ehrlichii MLHE-1]
 gi|114228229|gb|ABI58028.1| regulator of chromosome condensation, RCC1 [Alkalilimnicola
           ehrlichii MLHE-1]
          Length = 818

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 136/471 (28%), Positives = 196/471 (41%), Gaps = 75/471 (15%)

Query: 38  LPLTVG--SAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLP 95
           +P  VG  S W  V  G     +A+  +  L  WG +  +G      G  G+  EP  + 
Sbjct: 165 VPEQVGTDSDWTAVSAG-RDHTVAVKANGTLWAWGRSGRIGL-----GDSGDRDEPEQVG 218

Query: 96  TEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLS-----TGTGLDKDVFER 150
            +   +  +AG +H VAV   G ++ WG       G   GD +     T  G D D  ++
Sbjct: 219 VDNDWIALSAGGSHTVAVKADGTLWAWGRNNAGQLG--LGDTNHHYTPTQVGTDTDWAKK 276

Query: 151 QSSFLTEQVSPRSQVSRSSGGTSS-------GTDGRGSGEE-GSKR--------RRISLA 194
            S+     ++ ++  S  + G +         TD R + E+ GS          RR SLA
Sbjct: 277 ISAGRRHSLAVKADGSLWAWGDNEYGQLGLGDTDERHAPEQVGSNTDWAAISAGRRHSLA 336

Query: 195 KQTAESSSS-----------GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVW 243
            +   S  S           GD      P  V  +    +  V+AGG H+LA+   G + 
Sbjct: 337 VKADGSLWSWGYNDSGQLGLGDTADRNAPEQVGADTDWDL--VSAGGEHSLAVKADGTLM 394

Query: 244 GWGYGGEGQLGLGSRIRMVSSPHPIPC---IESSYGKDRSAALS-RGSVNSEGPG----- 294
            WG    GQLGLG     VS   P+P    I    G++ + A++  G++ + G       
Sbjct: 395 VWGLNHLGQLGLGD---TVSRDAPVPIASGIALVAGRNHTVAVNPDGTLRAWGDNEYGQL 451

Query: 295 -------FRVPGNYVKGIACGG------RHSAVITDAGALLTFGWGLYGQCGQGSTDDEL 341
                     P   V G A          HS  + D G L  +G   YGQ G G TDD  
Sbjct: 452 GLGVMRYIVTPSQTVTGSAWAAVNGGSFNHSLGLRDDGTLWAWGRNNYGQLGLGDTDDRA 511

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           +P  V S        V A  +HT+ + +DG ++A+G N  GQLG         P  + + 
Sbjct: 512 TPEQVGSH--TDWAAVNAASYHTLAVKNDGTLWAWGRNSSGQLGLSDTNDRHTPERVGS- 568

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
              +    +VS G  HT+ +  DG ++ WGWN YGQLGLGD  DR  P QV
Sbjct: 569 ---DTDWATVSVGQSHTSAVKPDGTLWAWGWNHYGQLGLGDTSDRLSPEQV 616



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 126/269 (46%), Gaps = 40/269 (14%)

Query: 205 DENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLG-SRIRMVS 263
           D   +AFP L            AAG  HT+A+   G +W WG  G G+LGLG +  R V 
Sbjct: 119 DVECTAFPVL------------AAGDDHTVAVKADGTLWAWGRNGYGRLGLGDTDDRDV- 165

Query: 264 SPHPI----PCIESSYGKDRSAAL-SRGSVNSEGPGFRV---------------PGNYVK 303
            P  +         S G+D + A+ + G++ + G   R+                 N   
Sbjct: 166 -PEQVGTDSDWTAVSAGRDHTVAVKANGTLWAWGRSGRIGLGDSGDRDEPEQVGVDNDWI 224

Query: 304 GIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWH 363
            ++ GG H+  +   G L  +G    GQ G G T+   +P  V +      + ++AG  H
Sbjct: 225 ALSAGGSHTVAVKADGTLWAWGRNNAGQLGLGDTNHHYTPTQVGTDTDWAKK-ISAGRRH 283

Query: 364 TICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
           ++ + +DG ++A+G N++GQLG G       P  + +    N    ++S G RH+  +  
Sbjct: 284 SLAVKADGSLWAWGDNEYGQLGLGDTDERHAPEQVGS----NTDWAAISAGRRHSLAVKA 339

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
           DG ++ WG+N  GQLGLGD  DRN P QV
Sbjct: 340 DGSLWSWGYNDSGQLGLGDTADRNAPEQV 368



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 103/348 (29%), Positives = 149/348 (42%), Gaps = 63/348 (18%)

Query: 104 AAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRS 163
           AAG  H VAV   G ++ WG          +G L  G   D+DV         EQV   S
Sbjct: 129 AAGDDHTVAVKADGTLWAWG-------RNGYGRLGLGDTDDRDV--------PEQVGTDS 173

Query: 164 QVSRSSGGTSSGTDGRGSGEEGSKRR--RISLAKQTAESSSSGDENLSAFPCLVTLNPGV 221
             +  S G       + +G   +  R  RI L         SGD +    P  V ++   
Sbjct: 174 DWTAVSAGRDHTVAVKANGTLWAWGRSGRIGLGD-------SGDRD---EPEQVGVDN-- 221

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
               ++AGG HT+A+   G +W WG    GQLGLG      ++ H  P   +  G D   
Sbjct: 222 DWIALSAGGSHTVAVKADGTLWAWGRNNAGQLGLGD-----TNHHYTP---TQVGTDT-- 271

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL 341
                             ++ K I+ G RHS  +   G+L  +G   YGQ G G TD+  
Sbjct: 272 ------------------DWAKKISAGRRHSLAVKADGSLWAWGDNEYGQLGLGDTDERH 313

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           +P  V S        ++AG  H++ + +DG ++++G N  GQLG G       P  + A 
Sbjct: 314 APEQVGS--NTDWAAISAGRRHSLAVKADGSLWSWGYNDSGQLGLGDTADRNAPEQVGAD 371

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIP 449
           +  ++    VS G  H+  +  DG +  WG N  GQLGLGD + R+ P
Sbjct: 372 TDWDL----VSAGGEHSLAVKADGTLMVWGLNHLGQLGLGDTVSRDAP 415



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 120/447 (26%), Positives = 172/447 (38%), Gaps = 64/447 (14%)

Query: 56  FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTE 115
            ++A+     L +WG  D  GQ  +        PE     T+  +V  +AG  H +AV  
Sbjct: 333 HSLAVKADGSLWSWGYNDS-GQLGLGDTADRNAPEQVGADTDWDLV--SAGGEHSLAVKA 389

Query: 116 GGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSG 175
            G +  WG           G L  G  + +D     +S +         V+ +  GT   
Sbjct: 390 DGTLMVWGLNH-------LGQLGLGDTVSRDAPVPIASGIALVAGRNHTVAVNPDGTLRA 442

Query: 176 TDGRGSGEEG-SKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTL 234
                 G+ G    R I    QT   S+    N  +F                    H+L
Sbjct: 443 WGDNEYGQLGLGVMRYIVTPSQTVTGSAWAAVNGGSF-------------------NHSL 483

Query: 235 ALSDIGQVWGWGYGGEGQLGLGSRIRMVS----------------SPHPIPCIES----S 274
            L D G +W WG    GQLGLG      +                S H +         +
Sbjct: 484 GLRDDGTLWAWGRNNYGQLGLGDTDDRATPEQVGSHTDWAAVNAASYHTLAVKNDGTLWA 543

Query: 275 YGKDRSAALSRGSVNSEGPGFRVPGNY-VKGIACGGRHSAVITDAGALLTFGWGLYGQCG 333
           +G++ S  L     N      RV  +     ++ G  H++ +   G L  +GW  YGQ G
Sbjct: 544 WGRNSSGQLGLSDTNDRHTPERVGSDTDWATVSVGQSHTSAVKPDGTLWAWGWNHYGQLG 603

Query: 334 QGSTDDELSPNCV---SSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            G T D LSP  V   S+ L      V+ GL HT+ + +DG ++A+G N  GQLG G   
Sbjct: 604 LGDTSDRLSPEQVGGESNWLA-----VSTGLHHTVAVKTDGTLWAWGWNVRGQLGLG--- 655

Query: 391 AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
             T  R        +    +VS     T  +  DG ++ WG N  GQLGLGD  +RN P+
Sbjct: 656 -HTSDRHAPVQVGSDTDWAAVSASGYRTLAVKADGTLWAWGENNNGQLGLGDTDNRNTPA 714

Query: 451 QVTIEGCVPRNVACGWWHTLLLAVPPT 477
           QV  +      V+ G +HTL      T
Sbjct: 715 QVGNDADWAA-VSTGLFHTLAFKEDDT 740



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 81/247 (32%), Positives = 112/247 (45%), Gaps = 36/247 (14%)

Query: 224 ATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAAL 283
           ATV+ G  HT A+   G +W WG+   GQLGLG                     D S  L
Sbjct: 573 ATVSVGQSHTSAVKPDGTLWAWGWNHYGQLGLG---------------------DTSDRL 611

Query: 284 SRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
           S   V  E        N++  ++ G  H+  +   G L  +GW + GQ G G T D  +P
Sbjct: 612 SPEQVGGES-------NWLA-VSTGLHHTVAVKTDGTLWAWGWNVRGQLGLGHTSDRHAP 663

Query: 344 NCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSL 403
             V S        V+A  + T+ + +DG ++A+G N  GQLG G    +T  R   A   
Sbjct: 664 VQVGS--DTDWAAVSASGYRTLAVKADGTLWAWGENNNGQLGLG----DTDNRNTPAQVG 717

Query: 404 ENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVA 463
            +    +VS G  HT    +D  ++ WG N  GQLGLGD  +R+ P QV  E      V+
Sbjct: 718 NDADWAAVSTGLFHTLAFKEDDTLWAWGRNHDGQLGLGDTDNRDAPVQVGNE-TDWSTVS 776

Query: 464 CGWWHTL 470
            G +HTL
Sbjct: 777 GGGYHTL 783



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 112/417 (26%), Positives = 158/417 (37%), Gaps = 75/417 (17%)

Query: 30  ILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIP 89
           ++  +V       GSAW  V GG    ++ + D   L  WG  ++ GQ  +        P
Sbjct: 455 VMRYIVTPSQTVTGSAWAAVNGGSFNHSLGLRDDGTLWAWGR-NNYGQLGLGDTDDRATP 513

Query: 90  EPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFE 149
           E     T+ + V AA+   H +AV   G ++ WG           G L      D+   E
Sbjct: 514 EQVGSHTDWAAVNAAS--YHTLAVKNDGTLWAWGRNSS-------GQLGLSDTNDRHTPE 564

Query: 150 R---QSSFLTEQVSPRSQVSRSSGGT--SSGTDGRGSGEEGSKRRRISLAKQTAESSSSG 204
           R    + + T  V      +    GT  + G +  G    G    R+S  +   ES+   
Sbjct: 565 RVGSDTDWATVSVGQSHTSAVKPDGTLWAWGWNHYGQLGLGDTSDRLSPEQVGGESN--- 621

Query: 205 DENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSS 264
                                V+ G  HT+A+   G +W WG+   GQLGLG        
Sbjct: 622 ------------------WLAVSTGLHHTVAVKTDGTLWAWGWNVRGQLGLG-------- 655

Query: 265 PHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTF 324
                     +  DR A +  GS            ++    A G R  AV  D G L  +
Sbjct: 656 ----------HTSDRHAPVQVGSDT----------DWAAVSASGYRTLAVKAD-GTLWAW 694

Query: 325 GWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQL 384
           G    GQ G G TD+  +P  V +        V+ GL+HT+    D  ++A+G N  GQL
Sbjct: 695 GENNNGQLGLGDTDNRNTPAQVGN--DADWAAVSTGLFHTLAFKEDDTLWAWGRNHDGQL 752

Query: 385 GTGGDQAETLPRLLDAPSL--ENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG 439
           G G    +T  R  DAP          +VS G  HT     DG +  WG N  GQLG
Sbjct: 753 GLG----DTDNR--DAPVQVGNETDWSTVSGGGYHTLATMSDGTLRAWGLNTSGQLG 803



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 81/168 (48%), Gaps = 8/168 (4%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           +A G  H+  +   G L  +G   YG+ G G TDD   P  V +        V+AG  HT
Sbjct: 128 LAAGDDHTVAVKADGTLWAWGRNGYGRLGLGDTDDRDVPEQVGT--DSDWTAVSAGRDHT 185

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           + + ++G ++A+G +    LG  GD+ E     +D   +      ++S G  HT  +  D
Sbjct: 186 VAVKANGTLWAWGRSGRIGLGDSGDRDEPEQVGVDNDWI------ALSAGGSHTVAVKAD 239

Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           G ++ WG N  GQLGLGD      P+QV  +    + ++ G  H+L +
Sbjct: 240 GTLWAWGRNNAGQLGLGDTNHHYTPTQVGTDTDWAKKISAGRRHSLAV 287


>gi|355749435|gb|EHH53834.1| E3 ISG15--protein ligase HERC5 [Macaca fascicularis]
          Length = 854

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/262 (31%), Positives = 122/262 (46%), Gaps = 37/262 (14%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P +V    GV +A ++AG  H++ALS  G ++ WG    GQLGLG       SP  I  +
Sbjct: 107 PQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLG-HTESKDSPSLIEAL 165

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
           ++                            V+ +ACGG HSA++T  G L TFG G +GQ
Sbjct: 166 DNQK--------------------------VEFLACGGSHSALLTQDGLLFTFGAGKHGQ 199

Query: 332 CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD-GDVYAFGGNQFGQLGTGGDQ 390
            G  ST +EL P  V+ L+G ++  +A G WHT+   SD G V++FG  + GQLG GG  
Sbjct: 200 LGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYVSDFGKVFSFGSGKDGQLGNGGTL 259

Query: 391 AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
            + +P  +   S E +  +S +       +   +  +  W   +   + L     R IP+
Sbjct: 260 DQLIPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWIKKENSYVNL----KRTIPT 315

Query: 451 QVTIEGCVPR---NVACGWWHT 469
               EG V R   +V    WH+
Sbjct: 316 --LNEGTVKRWIADVETKRWHS 335



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/164 (34%), Positives = 90/164 (54%), Gaps = 4/164 (2%)

Query: 309 GRHSAVITDAGALLTFGWGLYGQCGQGST-DDELSPNCVSSLLGIQIEGVAAGLWHTICI 367
           G  S  I   G L  +G  L+GQ G G       +P  V  L G+ +  ++AG  H++ +
Sbjct: 72  GNLSRFIVRGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMAL 131

Query: 368 SSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKV 427
           S  G++Y++G N+FGQLG G  +++  P L++A  L+N   + ++CG  H+A++  DG +
Sbjct: 132 SMSGNIYSWGKNEFGQLGLGHTESKDSPSLIEA--LDNQKVEFLACGGSHSALLTQDGLL 189

Query: 428 FCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
           F +G  K+GQLG     +   P  V  + G     +ACG WHTL
Sbjct: 190 FTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTL 233



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 83/183 (45%), Gaps = 37/183 (20%)

Query: 100 IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQV 159
           + + +AG AH +A++  G +Y+WG  E       FG L  G    KD     S  L E +
Sbjct: 118 LAQISAGEAHSMALSMSGNIYSWGKNE-------FGQLGLGHTESKD-----SPSLIEAL 165

Query: 160 SPRSQVSRSSGGTSSG---TDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFP 212
             +     + GG+ S     DG     G+G+ G          Q   +S+  +      P
Sbjct: 166 DNQKVEFLACGGSHSALLTQDGLLFTFGAGKHG----------QLGHNSTQNELR----P 211

Query: 213 CLVTLNPGVRIATVAAGGRHTLA-LSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           CLV    G R+  +A G  HTLA +SD G+V+ +G G +GQLG G  +  +    P+P  
Sbjct: 212 CLVAELVGNRVTQIACGRWHTLAYVSDFGKVFSFGSGKDGQLGNGGTLDQLI---PLPVK 268

Query: 272 ESS 274
            SS
Sbjct: 269 VSS 271


>gi|348567198|ref|XP_003469388.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Cavia porcellus]
          Length = 780

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 64/171 (37%), Positives = 98/171 (57%), Gaps = 4/171 (2%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           ++CG  H+AV+T    L  FG   +GQ G GS  D   P CV +L   +++  A G  HT
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSDVKKPTCVKALKPEKVQFAACGRNHT 99

Query: 365 ICISSDGDVYAFGGNQFGQLGTGG-DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
           + ++  G+VYA GGN  GQLG G  ++  T  R+    S  N+  K +S G+  +A +++
Sbjct: 100 LILTVVGNVYAAGGNNEGQLGLGDTEERNTFHRISFFTSEHNI--KQLSAGSNTSAALSE 157

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAV 474
           DG++F WG N  GQ+GL DVI   +P QV I G     ++CG++H+  + +
Sbjct: 158 DGRLFMWGDNSEGQIGLNDVISVCVPHQVNI-GKPISWISCGYYHSAFVTM 207



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 101/298 (33%), Positives = 141/298 (47%), Gaps = 45/298 (15%)

Query: 213 CLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS--------RIRMVSS 264
           C+  L P  ++   A G  HTL L+ +G V+  G   EGQLGLG         RI   +S
Sbjct: 80  CVKALKPE-KVQFAACGRNHTLILTVVGNVYAAGGNNEGQLGLGDTEERNTFHRISFFTS 138

Query: 265 PHPIPCIESSYGKDRSAALSRGSV------NSEG------------PGFRVPGNYVKGIA 306
            H I  +  S G + SAALS          NSEG            P     G  +  I+
Sbjct: 139 EHNIKQL--SAGSNTSAALSEDGRLFMWGDNSEGQIGLNDVISVCVPHQVNIGKPISWIS 196

Query: 307 CGGRHSAVITDAGALLTFGWGLYGQCG--QGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           CG  HSA +T  G L TFG    G+ G  +    +  +P  V+ +    I+ VA G  HT
Sbjct: 197 CGYYHSAFVTMDGELYTFGEPESGKLGLPKELLINHRTPQLVAGIPEKVIQ-VACGGGHT 255

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETL-PRLLDAPSLENVHSKSVSCGARHTAVIAD 423
           + ++    VY FG  QFGQLG G    ETL P++++   ++N     +SCG  HTA+I+D
Sbjct: 256 VVLTEKA-VYTFGLGQFGQLGLGTFCFETLEPKVIE--QIKNQKITYISCGENHTALISD 312

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC------VPRNVACGWWHTLLLAVP 475
            G ++ +G  ++G+LGLG     N  +Q     C        + VACG   TL+ A P
Sbjct: 313 IGLMYTFGDGRHGKLGLG---LENFSNQFFPILCSEFLRFTVQLVACGGCQTLVFAAP 367



 Score = 41.6 bits (96), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 60/234 (25%), Positives = 90/234 (38%), Gaps = 48/234 (20%)

Query: 52  GGCGFAMAISDSRKLITWGSTDD--LGQSYVTSGKHGEIPEPFPLPTEASIVK----AAA 105
            G   + A+S+  +L  WG   +  +G + V S           +P + +I K     + 
Sbjct: 147 AGSNTSAALSEDGRLFMWGDNSEGQIGLNDVIS---------VCVPHQVNIGKPISWISC 197

Query: 106 GWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQV 165
           G+ H   VT  GE+YT+G  E   SG++        GL K++     +       P   +
Sbjct: 198 GYYHSAFVTMDGELYTFGEPE---SGKL--------GLPKELLINHRTPQLVAGIPEKVI 246

Query: 166 SRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGV---- 221
             + GG             G        A  T      G   L  F C  TL P V    
Sbjct: 247 QVACGG-------------GHTVVLTEKAVYTFGLGQFGQLGLGTF-CFETLEPKVIEQI 292

Query: 222 ---RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIE 272
              +I  ++ G  HT  +SDIG ++ +G G  G+LGLG      +   PI C E
Sbjct: 293 KNQKITYISCGENHTALISDIGLMYTFGDGRHGKLGLGLE-NFSNQFFPILCSE 345


>gi|159038540|ref|YP_001537793.1| chromosome condensation regulator RCC1 [Salinispora arenicola
           CNS-205]
 gi|157917375|gb|ABV98802.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
           CNS-205]
          Length = 579

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 92/296 (31%), Positives = 125/296 (42%), Gaps = 29/296 (9%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
           G    S+ P  V +  G  I  VA G  H+LA++  G    WG    GQLG G+ I   S
Sbjct: 76  GTTTDSSSPVSVNVPAGTTITAVAGGAGHSLAVTSAGTALAWGDNAFGQLGDGTTIPSSS 135

Query: 264 SPHPIPCIESSY-------GKDRSAALSRGSVNSEGPGF------------RVP------ 298
           +P  +     +        G    A  S G+  + G  F            R P      
Sbjct: 136 TPVAVDVPAGTTVTALSGGGVHNLAVTSAGTALAWGDNFWGQLGDGSTTRSRTPVAVNVP 195

Query: 299 -GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGV 357
            G  +  +A G  HS  +T AG  L +G    GQ G G+  D   P       G  I  V
Sbjct: 196 AGTTITAVAAGQGHSLAVTSAGTALAWGDNSSGQLGDGTATDSSIPVAADVPAGTTITAV 255

Query: 358 AAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARH 417
           AAG  H++ ++S GDV A+G N  GQLG G   + + P  +D P+   V   +V+ G RH
Sbjct: 256 AAGGLHSLALTSGGDVLAWGANGSGQLGDGTTTSSSTPVAVDVPAGTTV--TAVAAGGRH 313

Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACGWWHTLLL 472
           +  +   G V  WG N  GQLG G     + P  V +  G     VA G  H+L +
Sbjct: 314 SLAVTSAGDVLAWGDNTAGQLGDGSTTHSSTPVAVNVPAGTTITAVATGSGHSLAV 369



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 114/403 (28%), Positives = 160/403 (39%), Gaps = 75/403 (18%)

Query: 89  PEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVF 148
           P    +P   +I   A G  H +AVT  G    WG          FG L  GT       
Sbjct: 84  PVSVNVPAGTTITAVAGGAGHSLAVTSAGTALAWG-------DNAFGQLGDGT-----TI 131

Query: 149 ERQSSFLTEQVSPRSQVSRSSGG-------TSSGT------DGRGSGEEGSKRRRISLAK 195
              S+ +   V   + V+  SGG       TS+GT      +  G   +GS  R      
Sbjct: 132 PSSSTPVAVDVPAGTTVTALSGGGVHNLAVTSAGTALAWGDNFWGQLGDGSTTR------ 185

Query: 196 QTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGL 255
                        S  P  V +  G  I  VAAG  H+LA++  G    WG    GQLG 
Sbjct: 186 -------------SRTPVAVNVPAGTTITAVAAGQGHSLAVTSAGTALAWGDNSSGQLG- 231

Query: 256 GSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVI 315
                                 D +A  S   V ++ P     G  +  +A GG HS  +
Sbjct: 232 ----------------------DGTATDSSIPVAADVPA----GTTITAVAAGGLHSLAL 265

Query: 316 TDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYA 375
           T  G +L +G    GQ G G+T    +P  V    G  +  VAAG  H++ ++S GDV A
Sbjct: 266 TSGGDVLAWGANGSGQLGDGTTTSSSTPVAVDVPAGTTVTAVAAGGRHSLAVTSAGDVLA 325

Query: 376 FGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKY 435
           +G N  GQLG G     + P  ++ P+   +   +V+ G+ H+  +        WG N +
Sbjct: 326 WGDNTAGQLGDGSTTHSSTPVAVNVPAGTTI--TAVATGSGHSLAVTSTDTALAWGDNTF 383

Query: 436 GQLGLGDVIDRNIPSQVTI-EGCVPRNVACGWWHTLLLAVPPT 477
           GQLG G      IP  V +  G     +A G +H+L + VP T
Sbjct: 384 GQLGDGSTTSSIIPVAVDLPAGTTVTAIAGGSFHSLAI-VPST 425



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 115/402 (28%), Positives = 166/402 (41%), Gaps = 75/402 (18%)

Query: 32  SPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQ-SYVTSGKHGEIPE 90
           SP+ V +P   G+    V GG  G ++A++ +   + WG  +  GQ    T+      P 
Sbjct: 83  SPVSVNVP--AGTTITAVAGG-AGHSLAVTSAGTALAWGD-NAFGQLGDGTTIPSSSTPV 138

Query: 91  PFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG---WKECVPSGRVFGDLSTGTGLDKDV 147
              +P   ++   + G  H +AVT  G    WG   W +        GD ST        
Sbjct: 139 AVDVPAGTTVTALSGGGVHNLAVTSAGTALAWGDNFWGQ-------LGDGST-------- 183

Query: 148 FERQSSFLTEQVSPRSQVSRSSGG-------TSSGTDGRGSGEEGSKRRRISLAKQTAES 200
             R  + +   V   + ++  + G       TS+GT     G+  S +    L   TA  
Sbjct: 184 -TRSRTPVAVNVPAGTTITAVAAGQGHSLAVTSAGT-ALAWGDNSSGQ----LGDGTATD 237

Query: 201 SSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR 260
           SS         P    +  G  I  VAAGG H+LAL+  G V  WG  G GQLG G+   
Sbjct: 238 SS--------IPVAADVPAGTTITAVAAGGLHSLALTSGGDVLAWGANGSGQLGDGT--- 286

Query: 261 MVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVP-GNYVKGIACGGRHSAVITDAG 319
             SS  P+                            VP G  V  +A GGRHS  +T AG
Sbjct: 287 TTSSSTPV-------------------------AVDVPAGTTVTAVAAGGRHSLAVTSAG 321

Query: 320 ALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN 379
            +L +G    GQ G GST    +P  V+   G  I  VA G  H++ ++S     A+G N
Sbjct: 322 DVLAWGDNTAGQLGDGSTTHSSTPVAVNVPAGTTITAVATGSGHSLAVTSTDTALAWGDN 381

Query: 380 QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
            FGQLG G   +  +P  +D P+   V   +++ G+ H+  I
Sbjct: 382 TFGQLGDGSTTSSIIPVAVDLPAGTTV--TAIAGGSFHSLAI 421



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 71/153 (46%), Gaps = 4/153 (2%)

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
           L +G    G+ G G+T D  SP  V+   G  I  VA G  H++ ++S G   A+G N F
Sbjct: 63  LAWGTNSAGRLGDGTTTDSSSPVSVNVPAGTTITAVAGGAGHSLAVTSAGTALAWGDNAF 122

Query: 382 GQLGTGGD-QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL 440
           GQLG G    + + P  +D P+   V   ++S G  H   +   G    WG N +GQLG 
Sbjct: 123 GQLGDGTTIPSSSTPVAVDVPAGTTV--TALSGGGVHNLAVTSAGTALAWGDNFWGQLGD 180

Query: 441 GDVIDRNIPSQVTI-EGCVPRNVACGWWHTLLL 472
           G       P  V +  G     VA G  H+L +
Sbjct: 181 GSTTRSRTPVAVNVPAGTTITAVAAGQGHSLAV 213


>gi|196012989|ref|XP_002116356.1| hypothetical protein TRIADDRAFT_60369 [Trichoplax adhaerens]
 gi|190580947|gb|EDV21026.1| hypothetical protein TRIADDRAFT_60369 [Trichoplax adhaerens]
          Length = 4253

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 115/405 (28%), Positives = 184/405 (45%), Gaps = 67/405 (16%)

Query: 80   VTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG---WKECVPSGRVFGD 136
            +TS K  EI  P+ L  +  I++          ++   E YTWG     +   SGR+   
Sbjct: 3370 ITSTKENEILPPWKLAMDREIIEWVTDRPQDWKMSAKCEAYTWGGGRHGQLAESGRLVLQ 3429

Query: 137  --LSTGTGLDKDVF-ERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISL 193
              L++     K +     S+F+ E          + G  S G  G+G+ ++  + R I+ 
Sbjct: 3430 PTLTSSFSKAKQIHCGHNSTFVIEH----DGTVLACGEGSYGRLGQGNSDDLPRLRPIT- 3484

Query: 194  AKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQL 253
                          L  F  +VT      +AT      H+LAL++ G+V+ WG G  G+L
Sbjct: 3485 -------------ALQGF--VVT-----ELATSTGLEGHSLALTETGEVFSWGDGDYGKL 3524

Query: 254  GLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSA 313
            G G+  R    P     IE+  G+D                       V  +ACG +HSA
Sbjct: 3525 GHGNSERQ-RRPRQ---IEALRGED-----------------------VLHVACGHKHSA 3557

Query: 314  VITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGD- 372
            ++T  G L TFG    G+ G G+T ++  P  V++L  I +E +A G  HT+ +++D + 
Sbjct: 3558 IVTVDGKLFTFGASDLGRLGLGNTSNKKLPAQVTALQPIMVELIACGANHTVVVTTDRES 3617

Query: 373  VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGW 432
            V+ FG  ++GQLG G   A+  P+ +DA S  N+  K + CGAR T  +  +GKV+  G 
Sbjct: 3618 VWTFGEGEYGQLGLGRTTAKMTPQYVDAFSKLNI--KKICCGARFTLALTKEGKVYSCGH 3675

Query: 433  NKYGQLGLGDVIDRN---IPSQVT-IEGCVPRNVACGWWHTLLLA 473
            N+    G+ +V  ++    P QV  +      ++A G+ H L L 
Sbjct: 3676 NRCN--GIFEVDTQHADYYPQQVMALSEQFIEDIAAGYEHALALT 3718



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 122/260 (46%), Gaps = 32/260 (12%)

Query: 220  GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
            G  +  VA G +H+  ++  G+++ +G    G+LGLG+     +S   +P          
Sbjct: 3543 GEDVLHVACGHKHSAIVTVDGKLFTFGASDLGRLGLGN-----TSNKKLP---------- 3587

Query: 280  SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVI-TDAGALLTFGWGLYGQCGQGSTD 338
                    V +  P        V+ IACG  H+ V+ TD  ++ TFG G YGQ G G T 
Sbjct: 3588 ------AQVTALQPIM------VELIACGANHTVVVTTDRESVWTFGEGEYGQLGLGRTT 3635

Query: 339  DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF-GQLGTGGDQAETLPRL 397
             +++P  V +   + I+ +  G   T+ ++ +G VY+ G N+  G        A+  P+ 
Sbjct: 3636 AKMTPQYVDAFSKLNIKKICCGARFTLALTKEGKVYSCGHNRCNGIFEVDTQHADYYPQQ 3695

Query: 398  LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEG 456
            + A S + +  + ++ G  H   +  +G V+ WG +  GQLGLG  + +  P  + +++G
Sbjct: 3696 VMALSEQFI--EDIAAGYEHALALTKEGDVWSWGNDTDGQLGLGQTLPQREPCLISSLQG 3753

Query: 457  CVPRNVACGWWHTLLLAVPP 476
               R ++ G  H+    V P
Sbjct: 3754 KGIRQISAGHNHSAAWTVAP 3773



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 69/232 (29%), Positives = 105/232 (45%), Gaps = 34/232 (14%)

Query: 204 GDENLSAFPCLVTLNPGVRIAT-VAAGGR--HTLALSDIGQVWGWGYGGEGQLGLGSRIR 260
           GD +    P L+      +I   V++ G   HTLA++  G+++ WG G  G+LG G+ + 
Sbjct: 449 GDSSNQNRPKLIRFEHECKIKNLVSSKGSDGHTLAIASDGRIYSWGDGDYGKLGHGNHVT 508

Query: 261 MVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA 320
              SP  I                       GP   + G  V+ IA G RHSA IT  G 
Sbjct: 509 Q-KSPKLIL----------------------GP---MQGKVVRQIAVGYRHSAAITSEGL 542

Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDG-DVYAFGGN 379
           L T+G G YG+ G G       P  V  + G+    V+ G   T+ IS D   V++FG  
Sbjct: 543 LYTWGDGDYGRLGHGDNHSRSIPTLVKDITGVG--SVSCGSSFTVVISQDATTVWSFGAG 600

Query: 380 QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWG 431
             G+LG G       P+++   +L+ +  + V C ++ +  +   G+VF WG
Sbjct: 601 DNGKLGHGDTSRVYRPKVI--SNLQGLLIRKVCCASQSSLALTSIGQVFVWG 650



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 84/155 (54%), Gaps = 7/155 (4%)

Query: 327 GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW---HTICISSDGDVYAFGGNQFGQ 383
           G YG+ G G + ++  P  +      +I+ + +      HT+ I+SDG +Y++G   +G+
Sbjct: 441 GNYGRLGLGDSSNQNRPKLIRFEHECKIKNLVSSKGSDGHTLAIASDGRIYSWGDGDYGK 500

Query: 384 LGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDV 443
           LG G    +  P+L+  P ++    + ++ G RH+A I  +G ++ WG   YG+LG GD 
Sbjct: 501 LGHGNHVTQKSPKLILGP-MQGKVVRQIAVGYRHSAAITSEGLLYTWGDGDYGRLGHGDN 559

Query: 444 IDRNIPSQVT-IEGCVPRNVACGWWHTLLLAVPPT 477
             R+IP+ V  I G    +V+CG   T++++   T
Sbjct: 560 HSRSIPTLVKDITGV--GSVSCGSSFTVVISQDAT 592



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 100/256 (39%), Gaps = 47/256 (18%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS-DIGQVWGWGYGGEGQLGLGSRIRMV 262
           GD +  + P LV    GV   +V+ G   T+ +S D   VW +G G  G+LG G   R V
Sbjct: 557 GDNHSRSIPTLVKDITGV--GSVSCGSSFTVVISQDATTVWSFGAGDNGKLGHGDTSR-V 613

Query: 263 SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL 322
             P  I  ++                          G  ++ + C  + S  +T  G + 
Sbjct: 614 YRPKVISNLQ--------------------------GLLIRKVCCASQSSLALTSIGQV- 646

Query: 323 TFGWGLYGQC-GQGSTDDE-LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
            F WG  G C G G  D   L P  +     +QI  +A G  H + ++ D DVY++G N 
Sbjct: 647 -FVWG-SGPCLGYGQADATFLVPKRLDEFQDLQIIDIAVGDNHCLALTCDNDVYSWGNNA 704

Query: 381 FGQLGTGGDQAET-LPRLLDAPSLENVHSKSVSCGARHTAV---------IADDGKVFCW 430
            GQ G G + +   LPR       +N     +S G  H+           I    K FC 
Sbjct: 705 SGQCGLGNNNSPVLLPR--KVTGFDNHVIYQISVGTSHSIAWTALPTDRCIVTSYKPFCI 762

Query: 431 GWNKYGQLGLGDVIDR 446
              +     L  ++DR
Sbjct: 763 DLKENTFSKLYHLLDR 778



 Score = 47.8 bits (112), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 59/146 (40%), Gaps = 29/146 (19%)

Query: 223  IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
            I  +AAG  H LAL+  G VW WG   +GQLGLG  +     P   PC+ SS        
Sbjct: 3704 IEDIAAGYEHALALTKEGDVWSWGNDTDGQLGLGQTL-----PQREPCLISSL------- 3751

Query: 283  LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                    +G G R        I+ G  HSA  T A A +            G    E  
Sbjct: 3752 --------QGKGIR-------QISAGHNHSAAWTVAPASIRKAMATSSSLELGLP--ERI 3794

Query: 343  PNCVSSLLGIQIEGVAAGLWHTICIS 368
            P    SL GI I+ + + L + + +S
Sbjct: 3795 PEIYGSLAGIDIQLIRSRLQYLLDMS 3820



 Score = 42.4 bits (98), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 77/325 (23%), Positives = 126/325 (38%), Gaps = 69/325 (21%)

Query: 52  GGCGFAMAISDSRKLITWGSTD--DLGQ-SYVTSGKHGEIPEPFPLPTEASIVKA-AAGW 107
           G  G  +AI+   ++ +WG  D   LG  ++VT       P+    P +  +V+  A G+
Sbjct: 476 GSDGHTLAIASDGRIYSWGDGDYGKLGHGNHVTQKS----PKLILGPMQGKVVRQIAVGY 531

Query: 108 AHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSR 167
            H  A+T  G +YTWG  +       +G L  G     D   R    L + ++    VS 
Sbjct: 532 RHSAAITSEGLLYTWGDGD-------YGRLGHG-----DNHSRSIPTLVKDITGVGSVSC 579

Query: 168 SSGGT------SSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGV 221
            S  T      ++     G+G+ G                  GD +    P +++   G+
Sbjct: 580 GSSFTVVISQDATTVWSFGAGDNGKL--------------GHGDTSRVYRPKVISNLQGL 625

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
            I  V    + +LAL+ IGQV+ WG G                    PC+   YG+  + 
Sbjct: 626 LIRKVCCASQSSLALTSIGQVFVWGSG--------------------PCL--GYGQADAT 663

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE- 340
            L    ++ E    ++       IA G  H   +T    + ++G    GQCG G+ +   
Sbjct: 664 FLVPKRLD-EFQDLQII-----DIAVGDNHCLALTCDNDVYSWGNNASGQCGLGNNNSPV 717

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTI 365
           L P  V+      I  ++ G  H+I
Sbjct: 718 LLPRKVTGFDNHVIYQISVGTSHSI 742


>gi|222616116|gb|EEE52248.1| hypothetical protein OsJ_34191 [Oryza sativa Japonica Group]
          Length = 425

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 127/264 (48%), Gaps = 44/264 (16%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI-RMVSSPHPIPCIESSYGKDRS 280
           ++  V+AG  H+ A++  G+++ WG    GQLGLG R  ++VS+P  + C+  +      
Sbjct: 126 KVVEVSAGNHHSCAVTADGKLFAWGRNSSGQLGLGKRAGKVVSTPRKVDCLADAR----- 180

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGS---- 336
                                VK +A G  HS   T+ G +L++G    G+ G G     
Sbjct: 181 ---------------------VKMVALGSEHSIATTEEGEVLSWGAAGAGRLGHGHKTSI 219

Query: 337 -----TDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
                T  E +P  + +L G++I+ +AAG+ H+ CI   G ++ FG       G  GD  
Sbjct: 220 LGFSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKGTLFIFGQKTEKGFGRSGD-- 277

Query: 392 ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG--DVIDRNIP 449
           E  P +++    E   S+ V+CG  HT V+ D G ++ WG N+ G LGLG  D++     
Sbjct: 278 ELRPTVVE----EVPFSEEVACGGYHTCVVTDSGDLYSWGSNENGCLGLGGTDMVRSPEV 333

Query: 450 SQVTIEGCVPRNVACGWWHTLLLA 473
            + ++       V+CGW HT +++
Sbjct: 334 LKSSLFKFPVSKVSCGWKHTAVIS 357



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 109/379 (28%), Positives = 163/379 (43%), Gaps = 54/379 (14%)

Query: 104 AAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRS 163
           A G AH + +TE G V+  G  +       FG L  G+ +   +   + S   E+V   S
Sbjct: 79  ACGGAHTLFLTESGRVFAAGLND-------FGQLGIGSSVTHSLEPIEVSGFDEKVVEVS 131

Query: 164 QVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRI 223
             +  S   ++  DG+      +   ++ L K+  +  S+        P  V      R+
Sbjct: 132 AGNHHSCAVTA--DGKLFAWGRNSSGQLGLGKRAGKVVST--------PRKVDCLADARV 181

Query: 224 ATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAAL 283
             VA G  H++A ++ G+V  WG  G G+LG G +  ++          S Y       L
Sbjct: 182 KMVALGSEHSIATTEEGEVLSWGAAGAGRLGHGHKTSILG----FSITTSEYTPRLIKNL 237

Query: 284 SRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                          G  +K IA G  HSA I + G L  F  G   + G G + DEL P
Sbjct: 238 D--------------GVKIKRIAAGMLHSACIDEKGTLFIF--GQKTEKGFGRSGDELRP 281

Query: 344 NCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSL 403
             V  +     E VA G +HT  ++  GD+Y++G N+ G LG GG      P +L + SL
Sbjct: 282 TVVEEV--PFSEEVACGGYHTCVVTDSGDLYSWGSNENGCLGLGGTDMVRSPEVLKS-SL 338

Query: 404 ENVHSKSVSCGARHTAVIADDGKVFCWGW------------NKYGQLGLGDVIDRNIPSQ 451
                  VSCG +HTAVI+  G ++ WGW            +  GQLG G+ +D   P  
Sbjct: 339 FKFPVSKVSCGWKHTAVIS-GGDIYTWGWGGANGTFFEEGHSSGGQLGHGNDVDYFEPMM 397

Query: 452 VTI-EGCVPRNVACGWWHT 469
           V   +     +V+CG+ HT
Sbjct: 398 VEFGKNARAVHVSCGFNHT 416



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 48/140 (34%), Positives = 76/140 (54%), Gaps = 6/140 (4%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDELSPNCVSSLLGIQIEGVAAGLWH 363
           +ACGG H+  +T++G +   G   +GQ G GS+    L P  VS      +E V+AG  H
Sbjct: 78  LACGGAHTLFLTESGRVFAAGLNDFGQLGIGSSVTHSLEPIEVSGFDEKVVE-VSAGNHH 136

Query: 364 TICISSDGDVYAFGGNQFGQLGTGGDQAETL--PRLLDAPSLENVHSKSVSCGARHTAVI 421
           +  +++DG ++A+G N  GQLG G    + +  PR +D   L +   K V+ G+ H+   
Sbjct: 137 SCAVTADGKLFAWGRNSSGQLGLGKRAGKVVSTPRKVDC--LADARVKMVALGSEHSIAT 194

Query: 422 ADDGKVFCWGWNKYGQLGLG 441
            ++G+V  WG    G+LG G
Sbjct: 195 TEEGEVLSWGAAGAGRLGHG 214



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 103/391 (26%), Positives = 159/391 (40%), Gaps = 66/391 (16%)

Query: 50  CGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLP-TEASIVKAAAGWA 108
           CGG     + +++S ++   G  +D GQ  + S     + EP  +   +  +V+ +AG  
Sbjct: 80  CGGA--HTLFLTESGRVFAAG-LNDFGQLGIGSSVTHSL-EPIEVSGFDEKVVEVSAGNH 135

Query: 109 HCVAVTEGGEVYTWGWKEC--VPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVS 166
           H  AVT  G+++ WG      +  G+  G + + T    D        +    S  S  +
Sbjct: 136 HSCAVTADGKLFAWGRNSSGQLGLGKRAGKVVS-TPRKVDCLADARVKMVALGSEHSIAT 194

Query: 167 RSSGGTSS-GTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIAT 225
              G   S G  G G    G K   +  +  T+E +          P L+    GV+I  
Sbjct: 195 TEEGEVLSWGAAGAGRLGHGHKTSILGFSITTSEYT----------PRLIKNLDGVKIKR 244

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
           +AAG  H+  + + G ++ +G   E   G                        RS    R
Sbjct: 245 IAAGMLHSACIDEKGTLFIFGQKTEKGFG------------------------RSGDELR 280

Query: 286 GSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNC 345
            +V  E P       + + +ACGG H+ V+TD+G L ++G    G  G G TD   SP  
Sbjct: 281 PTVVEEVP-------FSEEVACGGYHTCVVTDSGDLYSWGSNENGCLGLGGTDMVRSPEV 333

Query: 346 V-SSLLGIQIEGVAAGLWHTICISSDGDVYAFG-----GNQF-------GQLGTGGDQAE 392
           + SSL    +  V+ G  HT  IS  GD+Y +G     G  F       GQLG G D   
Sbjct: 334 LKSSLFKFPVSKVSCGWKHTAVISG-GDIYTWGWGGANGTFFEEGHSSGGQLGHGNDVDY 392

Query: 393 TLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
             P +++    +N  +  VSCG  HT  I +
Sbjct: 393 FEPMMVEFG--KNARAVHVSCGFNHTGAIFE 421


>gi|355687448|gb|EHH26032.1| E3 ISG15--protein ligase HERC5 [Macaca mulatta]
          Length = 883

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/262 (31%), Positives = 122/262 (46%), Gaps = 37/262 (14%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P +V    GV +A ++AG  H++ALS  G ++ WG    GQLGLG       SP  I  +
Sbjct: 115 PQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLG-HTESKDSPSLIEAL 173

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
           ++                            V+ +ACGG HSA++T  G L TFG G +GQ
Sbjct: 174 DNQK--------------------------VEFLACGGSHSALLTQDGLLFTFGAGKHGQ 207

Query: 332 CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD-GDVYAFGGNQFGQLGTGGDQ 390
            G  ST +EL P  V+ L+G ++  +A G WHT+   SD G V++FG  + GQLG GG  
Sbjct: 208 LGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYVSDFGKVFSFGSGKDGQLGNGGTL 267

Query: 391 AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
            + +P  +   S E +  +S +       +   +  +  W   +   + L     R IP+
Sbjct: 268 DQLIPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWIKKENSYVNL----KRTIPT 323

Query: 451 QVTIEGCVPR---NVACGWWHT 469
               EG V R   +V    WH+
Sbjct: 324 --LNEGTVKRWIADVETKRWHS 343



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 89/157 (56%), Gaps = 4/157 (2%)

Query: 316 TDAGALLTFGWGLYGQCGQGST-DDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVY 374
           T +G L  +G  L+GQ G G       +P  V  L G+ +  ++AG  H++ +S  G++Y
Sbjct: 87  TPSGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIY 146

Query: 375 AFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNK 434
           ++G N+FGQLG G  +++  P L++A  L+N   + ++CG  H+A++  DG +F +G  K
Sbjct: 147 SWGKNEFGQLGLGHTESKDSPSLIEA--LDNQKVEFLACGGSHSALLTQDGLLFTFGAGK 204

Query: 435 YGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
           +GQLG     +   P  V  + G     +ACG WHTL
Sbjct: 205 HGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTL 241



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 83/183 (45%), Gaps = 37/183 (20%)

Query: 100 IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQV 159
           + + +AG AH +A++  G +Y+WG  E       FG L  G    KD     S  L E +
Sbjct: 126 LAQISAGEAHSMALSMSGNIYSWGKNE-------FGQLGLGHTESKD-----SPSLIEAL 173

Query: 160 SPRSQVSRSSGGTSSG---TDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFP 212
             +     + GG+ S     DG     G+G+ G          Q   +S+  +      P
Sbjct: 174 DNQKVEFLACGGSHSALLTQDGLLFTFGAGKHG----------QLGHNSTQNELR----P 219

Query: 213 CLVTLNPGVRIATVAAGGRHTLA-LSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           CLV    G R+  +A G  HTLA +SD G+V+ +G G +GQLG G  +  +    P+P  
Sbjct: 220 CLVAELVGNRVTQIACGRWHTLAYVSDFGKVFSFGSGKDGQLGNGGTLDQLI---PLPVK 276

Query: 272 ESS 274
            SS
Sbjct: 277 VSS 279


>gi|357133876|ref|XP_003568548.1| PREDICTED: uncharacterized protein LOC100838586 [Brachypodium
           distachyon]
          Length = 1090

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 64/171 (37%), Positives = 98/171 (57%), Gaps = 4/171 (2%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ I+CGGRH+ ++T  G + ++G    G+ G G   D   P  V +L  + IE VA G 
Sbjct: 313 VQNISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCDVPQPKLVEALAHMNIELVACGE 372

Query: 362 WHTICISSDGDVYAFGGN--QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
           +HT  ++  GD+Y +G     FG LG G + +  +P+ L+ P LE +H  S+SCG  HTA
Sbjct: 373 YHTCAVTLSGDLYTWGNGTFNFGLLGHGNEVSHWMPKRLNGP-LEGIHVSSISCGPWHTA 431

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
           V+   G++F +G   +G LG GD    ++P +V +++G      ACG WHT
Sbjct: 432 VVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHT 482



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/268 (28%), Positives = 123/268 (45%), Gaps = 42/268 (15%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G+ +++++ G  HT  ++  GQ++ +G G  G LG G R + +S P  +  ++       
Sbjct: 417 GIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDR-QSLSVPREVESLK------- 468

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITD------------AGALLTFGWG 327
                         G R     V+  ACG  H+A + +            +G + T+G G
Sbjct: 469 --------------GLRT----VRA-ACGVWHTAAVVEVMVGNSSTSNCSSGKIFTWGDG 509

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG 387
             G+ G G  D  L P CV+SL+      VA G   T+ +++ G VY  G + +GQLG  
Sbjct: 510 DKGRLGHGDKDTRLVPTCVASLVEPNFCQVACGHCFTVALTTSGHVYTMGSSVYGQLGN- 568

Query: 388 GDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
             QA+ +        L     + +SCGA H AV+    +V+ WG    G+LG GD  DRN
Sbjct: 569 -PQADGMVPARVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRN 627

Query: 448 IPSQV-TIEGCVPRNVACGWWHTLLLAV 474
            P+ V  ++    R+V CG   T  + +
Sbjct: 628 SPTLVEALKDKQVRSVVCGINFTAAICI 655



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 77/143 (53%), Gaps = 8/143 (5%)

Query: 335 GSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL 394
           G+  D L P  +     + ++ ++ G  H   ++  G+VY++G    G+LG G D     
Sbjct: 294 GAKMDCLLPKPLEFAGRLDVQNISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCDVPQ 353

Query: 395 PRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWG---WNKYGQLGLGDVIDRNIPSQ 451
           P+L++A  L +++ + V+CG  HT  +   G ++ WG   +N +G LG G+ +   +P +
Sbjct: 354 PKLVEA--LAHMNIELVACGEYHTCAVTLSGDLYTWGNGTFN-FGLLGHGNEVSHWMPKR 410

Query: 452 VT--IEGCVPRNVACGWWHTLLL 472
           +   +EG    +++CG WHT ++
Sbjct: 411 LNGPLEGIHVSSISCGPWHTAVV 433


>gi|397472457|ref|XP_003807760.1| PREDICTED: LOW QUALITY PROTEIN: RCC1 domain-containing protein 1
           [Pan paniscus]
          Length = 377

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 115/249 (46%), Gaps = 45/249 (18%)

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFR--VPGNYVKGIACGGRHSAVITDAGALLTFGW 326
           P  E+  G+      +R  V+   P +R   P    + +  G  H+ ++  AG + ++G 
Sbjct: 126 PAGEAQAGRLPLLPCARAYVSPRAPFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGG 185

Query: 327 GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLG- 385
           G +GQ G G+ + EL P  + +L G+ +  VAAG WH++C+S  GD+Y +G N+ GQL  
Sbjct: 186 GRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLAL 245

Query: 386 ----------------------------TGGDQ---------AETLPRLLDAPSLENVHS 408
                                       TGG +          +  P L D P   +  +
Sbjct: 246 PTRNLAEDGETVAREATELNEDGSQVKRTGGAEDGAPAPFIAVQPFPALPDLPMGSD--A 303

Query: 409 KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI---EGCVPRNVACG 465
              SCG+RHTAV+   G+++ WGW KYGQLG  D    + P +V     +    + V CG
Sbjct: 304 VKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYFVDKQLQVKAVTCG 363

Query: 466 WWHTLLLAV 474
            W+T + AV
Sbjct: 364 PWNTYVYAV 372



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 15/173 (8%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P L+    G+ +A VAAGG H++ +S+ G ++ WG+   GQL L +R  +      +   
Sbjct: 202 PRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTR-NLAEDGETVARE 260

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVP------------GNYVKGIACGGRHSAVITDAG 319
            +   +D S     G      P   +             G+     +CG RH+AV+T  G
Sbjct: 261 ATELNEDGSQVKRTGGAEDGAPAPFIAVQPFPALPDLPMGSDAVKASCGSRHTAVVTRTG 320

Query: 320 ALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG--IQIEGVAAGLWHTICISSD 370
            L T+GWG YGQ G   T     P  V   +   +Q++ V  G W+T   + +
Sbjct: 321 ELYTWGWGKYGQLGHEDTTSLDRPRRVEYFVDKQLQVKAVTCGPWNTYVYAVE 373



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 66/155 (42%), Gaps = 40/155 (25%)

Query: 103 AAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGT---GLDKDVFERQSSFLTEQV 159
           AA GW H V V+E G++Y WGW E        G L+  T     D +   R+++ L E  
Sbjct: 217 AAGGW-HSVCVSETGDIYIWGWNES-------GQLALPTRNLAEDGETVAREATELNED- 267

Query: 160 SPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
              SQV R+ G            E+G+    I++                 FP L  L  
Sbjct: 268 --GSQVKRTGGA-----------EDGAPAPFIAV---------------QPFPALPDLPM 299

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG 254
           G      + G RHT  ++  G+++ WG+G  GQLG
Sbjct: 300 GSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLG 334



 Score = 39.3 bits (90), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 11/75 (14%)

Query: 90  EPFP----LPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDK 145
           +PFP    LP  +  VKA+ G  H   VT  GE+YTWGW +       +G L        
Sbjct: 289 QPFPALPDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGK-------YGQLGHEDTTSL 341

Query: 146 DVFERQSSFLTEQVS 160
           D   R   F+ +Q+ 
Sbjct: 342 DRPRRVEYFVDKQLQ 356


>gi|357493985|ref|XP_003617281.1| Lateral signaling target protein-like protein [Medicago truncatula]
 gi|355518616|gb|AET00240.1| Lateral signaling target protein-like protein [Medicago truncatula]
          Length = 1124

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 62/171 (36%), Positives = 97/171 (56%), Gaps = 4/171 (2%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ IACGGRH+A++T  G + ++G    G+ G G   D L P  + +L    IE VA G 
Sbjct: 334 VQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPKLIDALSNTNIELVACGE 393

Query: 362 WHTICISSDGDVYAF--GGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
           +HT  ++  GD+Y +  G   +G LG G   +  +P+ ++ P LE +H   +SCG  HTA
Sbjct: 394 YHTCAVTLSGDLYTWGNGAYNYGLLGHGNQVSHWVPKRVNGP-LEGIHVSYISCGPWHTA 452

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
           V+   G++F +G   +G LG GD    ++P +V +++G      +CG WHT
Sbjct: 453 VVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESLKGLRTMRASCGVWHT 503



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 83/281 (29%), Positives = 131/281 (46%), Gaps = 46/281 (16%)

Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
           S FP  +     + +  +A GGRH   ++  G+++ WG    G+LG G    ++   HP 
Sbjct: 320 SLFPKALESAVVLDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDVL---HP- 375

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL 328
             I+         ALS  +              ++ +ACG  H+  +T +G L T+G G 
Sbjct: 376 KLID---------ALSNTN--------------IELVACGEYHTCAVTLSGDLYTWGNGA 412

Query: 329 --YGQCGQGSTDDELSPNCVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLG 385
             YG  G G+      P  V+  L GI +  ++ G WHT  ++S G ++ FG   FG LG
Sbjct: 413 YNYGLLGHGNQVSHWVPKRVNGPLEGIHVSYISCGPWHTAVVTSAGQLFTFGDGTFGALG 472

Query: 386 TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD------------DGKVFCWGWN 433
            G  ++ +LPR  +  SL+ + +   SCG  HTA + +             GK+F WG  
Sbjct: 473 HGDRKSVSLPR--EVESLKGLRTMRASCGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDG 530

Query: 434 KYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAV 474
             G+LG GD   + +P+ V +       VACG  H+L +A+
Sbjct: 531 DKGRLGHGDKEAKLVPTCVALVEHNFCQVACG--HSLTVAL 569



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 122/279 (43%), Gaps = 46/279 (16%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGE--GQLGLGSRIRMVSSPHPIP 269
           P L+       I  VA G  HT A++  G ++ WG G    G LG G+++      H +P
Sbjct: 375 PKLIDALSNTNIELVACGEYHTCAVTLSGDLYTWGNGAYNYGLLGHGNQV-----SHWVP 429

Query: 270 CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
                             VN  GP   + G +V  I+CG  H+AV+T AG L TFG G +
Sbjct: 430 ----------------KRVN--GP---LEGIHVSYISCGPWHTAVVTSAGQLFTFGDGTF 468

Query: 330 GQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI------------SSDGDVYAFG 377
           G  G G       P  V SL G++    + G+WHT  +             S G ++ +G
Sbjct: 469 GALGHGDRKSVSLPREVESLKGLRTMRASCGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 528

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQ 437
               G+LG G  +A+ +P  +   +L   +   V+CG   T  +   G V+  G   YGQ
Sbjct: 529 DGDKGRLGHGDKEAKLVPTCV---ALVEHNFCQVACGHSLTVALTTSGHVYAMGSPVYGQ 585

Query: 438 LGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           LG     D  +P++V   +       +ACG +H  +L +
Sbjct: 586 LG-NPQADGKLPTRVEGKLLKSFVEEIACGAYHVAVLTL 623



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 122/260 (46%), Gaps = 45/260 (17%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G+ ++ ++ G  HT  ++  GQ++ +G G  G LG G R + VS P  +  ++       
Sbjct: 438 GIHVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDR-KSVSLPREVESLK------- 489

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDA------------GALLTFGWG 327
                         G R         +CG  H+A + +             G L T+G G
Sbjct: 490 --------------GLRT-----MRASCGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDG 530

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG 387
             G+ G G  + +L P CV+ L+      VA G   T+ +++ G VYA G   +GQLG  
Sbjct: 531 DKGRLGHGDKEAKLVPTCVA-LVEHNFCQVACGHSLTVALTTSGHVYAMGSPVYGQLGN- 588

Query: 388 GDQAE-TLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR 446
             QA+  LP  ++   L++   + ++CGA H AV+    +V+ WG    G+LG GD  DR
Sbjct: 589 -PQADGKLPTRVEGKLLKSF-VEEIACGAYHVAVLTLRNEVYTWGKGANGRLGHGDTDDR 646

Query: 447 NIPSQV-TIEGCVPRNVACG 465
           N P+ V  ++    +++ACG
Sbjct: 647 NNPTLVDALKDKHVKSIACG 666


>gi|304318007|ref|YP_003853152.1| S-layer domain-containing protein [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302779509|gb|ADL70068.1| S-layer domain protein [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
          Length = 479

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 129/253 (50%), Gaps = 29/253 (11%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS--------RIRMVSSP--------H 266
           +  +AAG  HT+AL + G VW WG+   GQLG G+        +++ +S          H
Sbjct: 228 VKAIAAGAYHTVALKNDGTVWAWGWNDCGQLGDGTTTNRTIPVQVKGISDVVAIAAGMYH 287

Query: 267 PIPCIES----SYGKDRSAALSRGSVNSE--GPGFRVPG-NYVKGIACGGRHSAVITDAG 319
            +         ++G +    L   +   E      +V G + VK IA G  ++ V+ + G
Sbjct: 288 TVALKNDGTVWAWGDNEHDQLGNETTKEEYHSTPVQVKGISDVKAIAAGASYTVVLKNDG 347

Query: 320 ALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN 379
            +  +G   YG+ G G+T++  +P  V+ +  ++   +AAG +HT+ + +DG V+ +G N
Sbjct: 348 TVWAWGVNEYGKLGDGTTNNSFTPVQVNGISNVK--AIAAGAYHTVVLKNDGTVWTWGYN 405

Query: 380 QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG 439
            +G+LG G     + P  +    + +V  K+++ GA HT  + +DG V+ WG N YG+LG
Sbjct: 406 HYGELGNGTTVDSSTP--VQVKGISDV--KAIAAGACHTVALKNDGTVWAWGCNYYGELG 461

Query: 440 LGDVIDRNIPSQV 452
            G  +D + P QV
Sbjct: 462 NGTAVDSSTPVQV 474



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/171 (33%), Positives = 94/171 (54%), Gaps = 5/171 (2%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           VK IA G  H+  + + G +  +GW   GQ G G+T +   P  V  +    +  +AAG+
Sbjct: 228 VKAIAAGAYHTVALKNDGTVWAWGWNDCGQLGDGTTTNRTIPVQVKGIS--DVVAIAAGM 285

Query: 362 WHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
           +HT+ + +DG V+A+G N+  QLG    + E     +    + +V  K+++ GA +T V+
Sbjct: 286 YHTVALKNDGTVWAWGDNEHDQLGNETTKEEYHSTPVQVKGISDV--KAIAAGASYTVVL 343

Query: 422 ADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
            +DG V+ WG N+YG+LG G   +   P QV     V + +A G +HT++L
Sbjct: 344 KNDGTVWAWGVNEYGKLGDGTTNNSFTPVQVNGISNV-KAIAAGAYHTVVL 393



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 70/283 (24%), Positives = 105/283 (37%), Gaps = 79/283 (27%)

Query: 101 VKA-AAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQV 159
           VKA AAG  H VA+   G V+ WGW +C       G L  GT  ++ +   Q   +++ V
Sbjct: 228 VKAIAAGAYHTVALKNDGTVWAWGWNDC-------GQLGDGTTTNRTI-PVQVKGISDVV 279

Query: 160 SPRSQVSRSSGGTSSGT-------DGRGSGEEGSKRRR---------ISLAKQTAESSS- 202
           +  + +  +    + GT       +    G E +K            IS  K  A  +S 
Sbjct: 280 AIAAGMYHTVALKNDGTVWAWGDNEHDQLGNETTKEEYHSTPVQVKGISDVKAIAAGASY 339

Query: 203 ----------------------SGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIG 240
                                  G  N S  P  V +N    +  +AAG  HT+ L + G
Sbjct: 340 TVVLKNDGTVWAWGVNEYGKLGDGTTNNSFTP--VQVNGISNVKAIAAGAYHTVVLKNDG 397

Query: 241 QVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGN 300
            VW WGY   G+LG G+ +   S+P  +  I                             
Sbjct: 398 TVWTWGYNHYGELGNGTTVDS-STPVQVKGISD--------------------------- 429

Query: 301 YVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
            VK IA G  H+  + + G +  +G   YG+ G G+  D  +P
Sbjct: 430 -VKAIAAGACHTVALKNDGTVWAWGCNYYGELGNGTAVDSSTP 471


>gi|115767093|ref|XP_787316.2| PREDICTED: RCC1 domain-containing protein 1-like
           [Strongylocentrotus purpuratus]
          Length = 371

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 68/195 (34%), Positives = 100/195 (51%), Gaps = 23/195 (11%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ IACG  H+ ++T  G + ++G G  GQ G G    E  P  + ++  + +  ++AG 
Sbjct: 172 VQEIACGKEHALLLTAQGLVYSYGMGSRGQLGHGDIGKEDVPKLLDAIACVPMVTISAGG 231

Query: 362 WHTICISSDGDVYAFGGNQFGQLGTGGD------------------QAETLPRLLDAPSL 403
           WH+ CIS+ GD+Y +G N+ GQLG   D                    + +P +LD P  
Sbjct: 232 WHSACISAIGDMYIWGWNESGQLGLPPDLESSRTEEGSSHVMADRISFQMVPAVLDLPGG 291

Query: 404 ENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI---EGCVPR 460
            NV    VSCG+RHTA ++ D +++ WGW KYGQLG GDV  R+ P  V           
Sbjct: 292 VNV--SKVSCGSRHTAAVSYDKRLYTWGWGKYGQLGHGDVQSRDSPKLVDFFLQNRLDVL 349

Query: 461 NVACGWWHTLLLAVP 475
           +V CG W + +   P
Sbjct: 350 DVTCGDWSSAVYTCP 364



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 75/164 (45%), Gaps = 17/164 (10%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
           GD      P L+     V + T++AGG H+  +S IG ++ WG+   GQLGL        
Sbjct: 205 GDIGKEDVPKLLDAIACVPMVTISAGGWHSACISAIGDMYIWGWNESGQLGLP------- 257

Query: 264 SPHPIPCIESSYGKDRSAAL--SRGSVNSEGPGFRVPGNY-VKGIACGGRHSAVITDAGA 320
                P +ESS  ++ S+ +   R S         +PG   V  ++CG RH+A ++    
Sbjct: 258 -----PDLESSRTEEGSSHVMADRISFQMVPAVLDLPGGVNVSKVSCGSRHTAAVSYDKR 312

Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLG--IQIEGVAAGLW 362
           L T+GWG YGQ G G      SP  V   L   + +  V  G W
Sbjct: 313 LYTWGWGKYGQLGHGDVQSRDSPKLVDFFLQNRLDVLDVTCGDW 356



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 54/89 (60%), Gaps = 2/89 (2%)

Query: 352 IQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSV 411
           I ++ +A G  H + +++ G VY++G    GQLG G    E +P+LLDA  +  V   ++
Sbjct: 170 IGVQEIACGKEHALLLTAQGLVYSYGMGSRGQLGHGDIGKEDVPKLLDA--IACVPMVTI 227

Query: 412 SCGARHTAVIADDGKVFCWGWNKYGQLGL 440
           S G  H+A I+  G ++ WGWN+ GQLGL
Sbjct: 228 SAGGWHSACISAIGDMYIWGWNESGQLGL 256



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 1/75 (1%)

Query: 400 APSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVP 459
           +P  + +  + ++CG  H  ++   G V+ +G    GQLG GD+   ++P  +    CVP
Sbjct: 164 SPFSQPIGVQEIACGKEHALLLTAQGLVYSYGMGSRGQLGHGDIGKEDVPKLLDAIACVP 223

Query: 460 R-NVACGWWHTLLLA 473
              ++ G WH+  ++
Sbjct: 224 MVTISAGGWHSACIS 238


>gi|345323514|ref|XP_003430715.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Ornithorhynchus anatinus]
          Length = 806

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 146/298 (48%), Gaps = 45/298 (15%)

Query: 213 CLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIE 272
           C+  L P  ++   A G  HTL  ++ G V+  G   +GQLGLG      ++ H I    
Sbjct: 166 CVKALKPE-KVKFAACGRNHTLVCTEGGNVYAAGGNSDGQLGLGD-TEERTTFHQISFFT 223

Query: 273 SSY-------GKDRSAALSRGSV------NSEG------------PGFRVPGNYVKGIAC 307
           S Y       G + SAAL+          NSEG            P   V G  V  ++C
Sbjct: 224 SRYKIKQLSAGSNTSAALTEDGELYMWGDNSEGQIGLASESNVCVPCRVVIGKPVSWVSC 283

Query: 308 GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLL-GI--QIEGVAAGLWHT 364
           G  HSA++T  G L TFG    G+ G  S  ++L  + +  L+ GI  ++  VA G  HT
Sbjct: 284 GYYHSALVTTDGELYTFGEPENGKLGLSS--EQLKNHRIPQLVPGISGKVNQVACGGGHT 341

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAET-LPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
           + ++ + DVY FG  +FGQLG G    ET +P++++    + +H   V+CG  HTA+I+D
Sbjct: 342 VALTEE-DVYTFGLGEFGQLGLGTCIFETSVPKVVEHLRKQKIHY--VACGENHTALISD 398

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVP------RNVACGWWHTLLLAVP 475
            G ++ +G  ++G+LGLG   + N  +Q     C          VACG  H L+ A+P
Sbjct: 399 TGLMYTFGDGRHGKLGLG---EENFTNQFIPTLCSNFLRFSVHLVACGGCHMLVFAIP 453



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 87/170 (51%), Gaps = 2/170 (1%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           ++CG  H+A +T    L   G   +GQ G GS      P CV +L   +++  A G  HT
Sbjct: 126 LSCGDEHTAFVTGNSKLYMLGSNNWGQLGLGSKTTVNKPTCVKALKPEKVKFAACGRNHT 185

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           +  +  G+VYA GGN  GQLG G  +  T    +   +      K +S G+  +A + +D
Sbjct: 186 LVCTEGGNVYAAGGNSDGQLGLGDTEERTTFHQISFFT-SRYKIKQLSAGSNTSAALTED 244

Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAV 474
           G+++ WG N  GQ+GL    +  +P +V I   V   V+CG++H+ L+  
Sbjct: 245 GELYMWGDNSEGQIGLASESNVCVPCRVVIGKPVSW-VSCGYYHSALVTT 293



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 137/328 (41%), Gaps = 62/328 (18%)

Query: 103 AAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPR 162
           AA G  H +  TEGG VY  G       G   G L  G   ++  F  Q SF T +   +
Sbjct: 178 AACGRNHTLVCTEGGNVYAAG-------GNSDGQLGLGDTEERTTF-HQISFFTSRYKIK 229

Query: 163 SQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLN 218
              + S+   +   DG     G   EG    +I LA           E+    PC V + 
Sbjct: 230 QLSAGSNTSAALTEDGELYMWGDNSEG----QIGLA----------SESNVCVPCRVVI- 274

Query: 219 PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS-RIRMVSSPHPIPCIESSYGK 277
            G  ++ V+ G  H+  ++  G+++ +G    G+LGL S +++    P  +P I      
Sbjct: 275 -GKPVSWVSCGYYHSALVTTDGELYTFGEPENGKLGLSSEQLKNHRIPQLVPGIS----- 328

Query: 278 DRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST 337
                   G VN               +ACGG H+  +T+   + TFG G +GQ G G+ 
Sbjct: 329 --------GKVNQ--------------VACGGGHTVALTEED-VYTFGLGEFGQLGLGTC 365

Query: 338 DDELS-PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ--AETL 394
             E S P  V  L   +I  VA G  HT  IS  G +Y FG  + G+LG G +    + +
Sbjct: 366 IFETSVPKVVEHLRKQKIHYVACGENHTALISDTGLMYTFGDGRHGKLGLGEENFTNQFI 425

Query: 395 PRLLDAPSLENVHSKSVSCGARHTAVIA 422
           P L       +VH   V+CG  H  V A
Sbjct: 426 PTLCSNFLRFSVH--LVACGGCHMLVFA 451



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 72/281 (25%), Positives = 131/281 (46%), Gaps = 36/281 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM-----VSSPHPIPCIESSYGK 277
           +A ++ G  HT  ++   +++  G    GQLGLGS+  +     V +  P     ++ G+
Sbjct: 123 LAQLSCGDEHTAFVTGNSKLYMLGSNNWGQLGLGSKTTVNKPTCVKALKPEKVKFAACGR 182

Query: 278 DRSAALSRGSV------NSEGP---------------GFRVPGNYVKGIACGGRHSAVIT 316
           + +   + G        NS+G                 F      +K ++ G   SA +T
Sbjct: 183 NHTLVCTEGGNVYAAGGNSDGQLGLGDTEERTTFHQISFFTSRYKIKQLSAGSNTSAALT 242

Query: 317 DAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAF 376
           + G L  +G    GQ G  S  +   P  V  ++G  +  V+ G +H+  +++DG++Y F
Sbjct: 243 EDGELYMWGDNSEGQIGLASESNVCVPCRV--VIGKPVSWVSCGYYHSALVTTDGELYTF 300

Query: 377 GGNQFGQLGTGGDQAET--LPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNK 434
           G  + G+LG   +Q +   +P+L+   S +      V+CG  HT  + ++  V+ +G  +
Sbjct: 301 GEPENGKLGLSSEQLKNHRIPQLVPGISGK---VNQVACGGGHTVALTEED-VYTFGLGE 356

Query: 435 YGQLGLGD-VIDRNIPSQVT-IEGCVPRNVACGWWHTLLLA 473
           +GQLGLG  + + ++P  V  +       VACG  HT L++
Sbjct: 357 FGQLGLGTCIFETSVPKVVEHLRKQKIHYVACGENHTALIS 397



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 52/118 (44%), Gaps = 17/118 (14%)

Query: 357 VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR 416
           + A  +        G V+ FG ++F         AE +P       L N     +SCG  
Sbjct: 84  LRANTYRKFRTRHSGAVFTFGKSKF---------AENIPSKF---WLRNDTLAQLSCGDE 131

Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNV---ACGWWHTLL 471
           HTA +  + K++  G N +GQLGLG     N P+   ++   P  V   ACG  HTL+
Sbjct: 132 HTAFVTGNSKLYMLGSNNWGQLGLGSKTTVNKPT--CVKALKPEKVKFAACGRNHTLV 187


>gi|302784100|ref|XP_002973822.1| hypothetical protein SELMODRAFT_100519 [Selaginella moellendorffii]
 gi|300158154|gb|EFJ24777.1| hypothetical protein SELMODRAFT_100519 [Selaginella moellendorffii]
          Length = 413

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 84/285 (29%), Positives = 125/285 (43%), Gaps = 40/285 (14%)

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSP-----HPIPCIESSYGKDR 279
           +V+ GG HTL L+D G+V+  G    GQLG+  +      P      P PC+  + G+  
Sbjct: 65  SVSCGGAHTLILTDKGRVFATGLNSSGQLGVPLKRESSFDPVEVHGFPDPCVHIAAGRYH 124

Query: 280 SAALS---------RGSVNSEGPGFRVPGNYV-------------KGIACGGRHSAVITD 317
           SAA++         R S    G G R    Y+             K +A G  HS  + +
Sbjct: 125 SAAITSSGETYVWGRNSEGQLGLGKRAKSVYITPQKMESLAGMRLKALALGTDHSLGLAE 184

Query: 318 AGALLTFGWGLYGQCGQGSTD---------DELSPNCVSSLLGIQIEGVAAGLWHTICIS 368
            G +L++G   +G  G G            +E +P  +  L  +QI  V+AGL H+ C  
Sbjct: 185 TGQVLSWGTNRFGCLGHGEMTGFFDFFKDTNEYTPRIIHCLEKLQIRSVSAGLVHSACAD 244

Query: 369 SDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVF 428
             G +Y+FG     QLG G +   + P     P L  V   S+SCG  HT  I  DG ++
Sbjct: 245 DSGTIYSFGQGSMCQLGLGNNNDASQP--CPIPDLPRV--SSISCGGYHTGAITQDGDIY 300

Query: 429 CWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
            WG N++G LG G           ++       ++CGW HT  ++
Sbjct: 301 TWGSNEHGCLGSGFRASSKPLRLESLAEAFMSEISCGWKHTAAIS 345



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/293 (29%), Positives = 135/293 (46%), Gaps = 55/293 (18%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS--------------------SP 265
           +AAG  H+ A++  G+ + WG   EGQLGLG R + V                     + 
Sbjct: 118 IAAGRYHSAAITSSGETYVWGRNSEGQLGLGKRAKSVYITPQKMESLAGMRLKALALGTD 177

Query: 266 HPIPCIES----SYGKDRSAALSRGSVNSEGPGFRVPGNY------------VKGIACGG 309
           H +   E+    S+G +R   L  G +      F+    Y            ++ ++ G 
Sbjct: 178 HSLGLAETGQVLSWGTNRFGCLGHGEMTGFFDFFKDTNEYTPRIIHCLEKLQIRSVSAGL 237

Query: 310 RHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISS 369
            HSA   D+G + +FG G   Q G G+ +D   P  +  L   ++  ++ G +HT  I+ 
Sbjct: 238 VHSACADDSGTIYSFGQGSMCQLGLGNNNDASQPCPIPDL--PRVSSISCGGYHTGAITQ 295

Query: 370 DGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFC 429
           DGD+Y +G N+ G LG+G  +A + P  L+  SL       +SCG +HTA I+ DG +F 
Sbjct: 296 DGDIYTWGSNEHGCLGSG-FRASSKPLRLE--SLAEAFMSEISCGWKHTAAIS-DGYIFS 351

Query: 430 WGW------------NKYGQLGLGDVIDRNIPSQVTIEGCVPR-NVACGWWHT 469
           WGW            +  GQLG+G   D   P  + ++  +   +V+CG+ HT
Sbjct: 352 WGWGGSYGTYATQAESSGGQLGVGTDFDFFEPVPIEMDDRLSALHVSCGFNHT 404



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 90/356 (25%), Positives = 137/356 (38%), Gaps = 73/356 (20%)

Query: 92  FPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRV-FGDLSTGTGLDKDVFER 150
           FP P     V  AAG  H  A+T  GE Y WG       G++  G  +    +     E 
Sbjct: 111 FPDP----CVHIAAGRYHSAAITSSGETYVWGRNS---EGQLGLGKRAKSVYITPQKMES 163

Query: 151 QSSFLTEQVSPRSQVSRSSGGT----SSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDE 206
            +    + ++  +  S     T    S GT+  G    G         K T E +     
Sbjct: 164 LAGMRLKALALGTDHSLGLAETGQVLSWGTNRFGCLGHGEMTGFFDFFKDTNEYT----- 218

Query: 207 NLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPH 266
                P ++     ++I +V+AG  H+    D G ++ +G G   QLGLG+     S P 
Sbjct: 219 -----PRIIHCLEKLQIRSVSAGLVHSACADDSGTIYSFGQGSMCQLGLGNN-NDASQPC 272

Query: 267 PIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGW 326
           PIP +                              V  I+CGG H+  IT  G + T+G 
Sbjct: 273 PIPDLPR----------------------------VSSISCGGYHTGAITQDGDIYTWGS 304

Query: 327 GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG--------- 377
             +G  G G       P  + SL    +  ++ G  HT  IS DG ++++G         
Sbjct: 305 NEHGCLGSGFRASS-KPLRLESLAEAFMSEISCGWKHTAAIS-DGYIFSWGWGGSYGTYA 362

Query: 378 ------GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKV 427
                 G Q G +GT  D  E +P  +D    + + +  VSCG  HTA I ++ ++
Sbjct: 363 TQAESSGGQLG-VGTDFDFFEPVPIEMD----DRLSALHVSCGFNHTAAILEEIEI 413



 Score = 46.6 bits (109), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 67/153 (43%), Gaps = 7/153 (4%)

Query: 325 GWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQL 384
           G G  G+ G   +  +  P    +L   +   V+ G  HT+ ++  G V+A G N  GQL
Sbjct: 34  GNGDQGRLGLSESGSQFEPVLCRALESHEPCSVSCGGAHTLILTDKGRVFATGLNSSGQL 93

Query: 385 GTGGDQAETL-PRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDV 443
           G    +  +  P  +       VH   ++ G  H+A I   G+ + WG N  GQLGLG  
Sbjct: 94  GVPLKRESSFDPVEVHGFPDPCVH---IAAGRYHSAAITSSGETYVWGRNSEGQLGLGKR 150

Query: 444 IDRNIPSQVTIE---GCVPRNVACGWWHTLLLA 473
                 +   +E   G   + +A G  H+L LA
Sbjct: 151 AKSVYITPQKMESLAGMRLKALALGTDHSLGLA 183



 Score = 42.0 bits (97), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 36/68 (52%), Gaps = 2/68 (2%)

Query: 373 VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGW 432
           V  +G    G+LG     ++  P L  A  LE+    SVSCG  HT ++ D G+VF  G 
Sbjct: 30  VALWGNGDQGRLGLSESGSQFEPVLCRA--LESHEPCSVSCGGAHTLILTDKGRVFATGL 87

Query: 433 NKYGQLGL 440
           N  GQLG+
Sbjct: 88  NSSGQLGV 95


>gi|91202557|emb|CAJ72196.1| hypothetical protein kustd1451 [Candidatus Kuenenia
           stuttgartiensis]
          Length = 1413

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/268 (35%), Positives = 130/268 (48%), Gaps = 28/268 (10%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI---PCIESSYGKDRSAA 282
           +A G  HT+AL   G VW WG+   GQLG G+ I   +    I     I  + G   + A
Sbjct: 646 IAGGVYHTIALKSDGTVWTWGWNNSGQLGDGTTINRSTPVQVIGLTDVIAIAGGDYHTIA 705

Query: 283 L-SRGSVNSEGPGF-----------RVPGNYVKG------IACGGRHSAVITDAGALLTF 324
           L S G+V + G  +           R     VKG      IA G  HS  +   G +  +
Sbjct: 706 LKSDGTVWTWGFNYYGQLGGGATTNRSTPVQVKGLADIIAIAGGYVHSIALKSDGTVWAW 765

Query: 325 GWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQL 384
           G+  YGQ G GST D L+P  VS L    I  +A G  HTI + SDG V+A+G N+ GQL
Sbjct: 766 GYNGYGQLGDGSTTDHLTPVQVSGL--TDIIAIAGGYIHTIALKSDGTVWAWGHNEGGQL 823

Query: 385 GTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVI 444
           G G     + P  +    L +V   +V+    HT  +  DG V+ WG N YGQLG G   
Sbjct: 824 GDGTTTNSSTP--VQVSGLTDV--IAVTARLYHTIALKSDGTVWTWGRNIYGQLGDGSTT 879

Query: 445 DRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           +R++P QV I       +A G++HT+ L
Sbjct: 880 ERSLPVQV-IGLTDVIAIAGGYYHTIAL 906



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/275 (31%), Positives = 119/275 (43%), Gaps = 27/275 (9%)

Query: 222  RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR-----MVSSPHPIPCIESSY- 275
             I  +A G  HT+AL   G VW WGY G GQLG GS         VS    +  I   Y 
Sbjct: 1140 NIIAIAGGYVHTIALKSDGTVWAWGYNGYGQLGDGSTTNRSTPVQVSGLTDVIAIAGEYV 1199

Query: 276  --------------GKDRSAALSRGSVNSEGPGFRVPG-NYVKGIACGGRHSAVITDAGA 320
                          G +    L  GS  +     +V G   V  IA G  H+  +   G 
Sbjct: 1200 HTVALKSDGTVWAWGYNGYGQLGDGSTTNRSTPVQVSGLTDVIAIAGGYVHTIALKSDGT 1259

Query: 321  LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
            + T+GW   GQ G G+T + L+P  VS L       +A G +HTI + SD  V+A+G N 
Sbjct: 1260 VWTWGWNNSGQLGDGTTINRLTPVQVSGL--TDAIAIAGGDYHTIALKSDNTVWAWGSNS 1317

Query: 381  FGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL 440
            +GQLG G     T+ RL          + +++ G  HT  +  D  V+ WG N YGQLG 
Sbjct: 1318 YGQLGDG----TTINRLTPVQVSGLTDAIAIAGGDYHTIALKSDNTVWAWGSNSYGQLGD 1373

Query: 441  GDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAVP 475
                +   P+Q  +   V    A     T++ + P
Sbjct: 1374 VSTANSLTPAQCLLSPIVSTGTAINIGTTMVRSTP 1408



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 122/256 (47%), Gaps = 27/256 (10%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMV----------------SSPH 266
           +  +A G  HT+AL   G VW WG    G+LG GS                      + H
Sbjct: 245 VIAIAGGYAHTIALKSDGTVWAWGDNEGGRLGDGSTTNRSIPVKVGGLSDVIAIAGGNAH 304

Query: 267 PIPCIES----SYGKDRSAALSRGSVNSEGPGFRVPG-NYVKGIACGGRHSAVITDAGAL 321
            I         ++G +    L  GS  +     +V G   V  IA G  H+ V+   G +
Sbjct: 305 TIALKSDGTVWAWGDNEGGQLGDGSTTNRSTPVKVSGLADVIAIAGGYSHTIVLRSDGTV 364

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
            T+G    GQ G GST +  +P  VS L    +  +A G++HTI + SDG ++A+G N +
Sbjct: 365 WTWGHNEGGQLGDGSTTNRSTPVQVSGLA--DVIAIAGGVYHTIAVKSDGTMWAWGYNWY 422

Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
           GQLG G     + P  ++   L +V   +++ G  HT  +  DG V+ WG+N YGQLG G
Sbjct: 423 GQLGDGTTINSSTPVQVNG--LTDV--IAIAGGYYHTIAMKSDGAVWTWGFNYYGQLGDG 478

Query: 442 DVIDRNIPSQVTIEGC 457
            + +R+ P+Q ++ G 
Sbjct: 479 SITNRSTPAQRSLSGM 494



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 90/290 (31%), Positives = 131/290 (45%), Gaps = 28/290 (9%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR--- 260
           GDE+ +     V ++    +  +A G  HT+AL   G VW WG    GQLG GS      
Sbjct: 176 GDESTTNRSTPVQVSGLTDVIAIAGGAYHTIALKSDGTVWAWGNNEGGQLGDGSTTDRST 235

Query: 261 --MVSSPHPIPCIESSY---------------GKDRSAALSRGSVNSEGPGFRVPG-NYV 302
              VS    +  I   Y               G +    L  GS  +     +V G + V
Sbjct: 236 PVQVSGLTDVIAIAGGYAHTIALKSDGTVWAWGDNEGGRLGDGSTTNRSIPVKVGGLSDV 295

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
             IA G  H+  +   G +  +G    GQ G GST +  +P  VS L    +  +A G  
Sbjct: 296 IAIAGGNAHTIALKSDGTVWAWGDNEGGQLGDGSTTNRSTPVKVSGLA--DVIAIAGGYS 353

Query: 363 HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIA 422
           HTI + SDG V+ +G N+ GQLG G     + P  +    L +V   +++ G  HT  + 
Sbjct: 354 HTIVLRSDGTVWTWGHNEGGQLGDGSTTNRSTP--VQVSGLADV--IAIAGGVYHTIAVK 409

Query: 423 DDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
            DG ++ WG+N YGQLG G  I+ + P QV     V   +A G++HT+ +
Sbjct: 410 SDGTMWAWGYNWYGQLGDGTTINSSTPVQVNGLTDVIA-IAGGYYHTIAM 458



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 79/251 (31%), Positives = 116/251 (46%), Gaps = 38/251 (15%)

Query: 223  IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
            +  +A G  HT+AL     VW WG    GQLG G+ I   S P P+  + +         
Sbjct: 1091 VIAIAGGDYHTIALKSDNTVWAWGSNSYGQLGDGT-ITNRSIPTPVTYLTN--------- 1140

Query: 283  LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                               +  IA G  H+  +   G +  +G+  YGQ G GST +  +
Sbjct: 1141 -------------------IIAIAGGYVHTIALKSDGTVWAWGYNGYGQLGDGSTTNRST 1181

Query: 343  PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPS 402
            P  VS L    +  +A    HT+ + SDG V+A+G N +GQLG G     + P  +    
Sbjct: 1182 PVQVSGL--TDVIAIAGEYVHTVALKSDGTVWAWGYNGYGQLGDGSTTNRSTP--VQVSG 1237

Query: 403  LENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRN 461
            L +V   +++ G  HT  +  DG V+ WGWN  GQLG G  I+R  P QV+ +   +   
Sbjct: 1238 LTDV--IAIAGGYVHTIALKSDGTVWTWGWNNSGQLGDGTTINRLTPVQVSGLTDAIA-- 1293

Query: 462  VACGWWHTLLL 472
            +A G +HT+ L
Sbjct: 1294 IAGGDYHTIAL 1304



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 113/247 (45%), Gaps = 36/247 (14%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
           ++AG  HTL L   G VW WG    GQLG  S     S+P  +  +              
Sbjct: 148 ISAGAYHTLTLKPDGAVWTWGANWNGQLGDESTTNR-STPVQVSGLTD------------ 194

Query: 286 GSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNC 345
                           V  IA G  H+  +   G +  +G    GQ G GST D  +P  
Sbjct: 195 ----------------VIAIAGGAYHTIALKSDGTVWAWGNNEGGQLGDGSTTDRSTPVQ 238

Query: 346 VSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLEN 405
           VS L    +  +A G  HTI + SDG V+A+G N+ G+LG G     ++P  +    L +
Sbjct: 239 VSGL--TDVIAIAGGYAHTIALKSDGTVWAWGDNEGGRLGDGSTTNRSIP--VKVGGLSD 294

Query: 406 VHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACG 465
           V   +++ G  HT  +  DG V+ WG N+ GQLG G   +R+ P +V+    V   +A G
Sbjct: 295 V--IAIAGGNAHTIALKSDGTVWAWGDNEGGQLGDGSTTNRSTPVKVSGLADVIA-IAGG 351

Query: 466 WWHTLLL 472
           + HT++L
Sbjct: 352 YSHTIVL 358



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 97/363 (26%), Positives = 143/363 (39%), Gaps = 70/363 (19%)

Query: 83  GKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTG 142
           G   +   P  +      +  A G  H +A+   G V+TWGW          G L  GT 
Sbjct: 626 GSTTDSSTPVQVSGLTDAIAIAGGVYHTIALKSDGTVWTWGWNNS-------GQLGDGTT 678

Query: 143 LDKDVFERQSSFLTEQVS----PRSQVSRSSGGT--SSGTDGRGSGEEGSKRRRISLAKQ 196
           +++     Q   LT+ ++        ++  S GT  + G +  G    G+   R      
Sbjct: 679 INRST-PVQVIGLTDVIAIAGGDYHTIALKSDGTVWTWGFNYYGQLGGGATTNR------ 731

Query: 197 TAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLG 256
                             V +     I  +A G  H++AL   G VW WGY G GQLG G
Sbjct: 732 ---------------STPVQVKGLADIIAIAGGYVHSIALKSDGTVWAWGYNGYGQLGDG 776

Query: 257 SRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVIT 316
           S     ++ H  P   S                            +  IA G  H+  + 
Sbjct: 777 S-----TTDHLTPVQVSGLTD------------------------IIAIAGGYIHTIALK 807

Query: 317 DAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAF 376
             G +  +G    GQ G G+T +  +P  VS L    +  V A L+HTI + SDG V+ +
Sbjct: 808 SDGTVWAWGHNEGGQLGDGTTTNSSTPVQVSGL--TDVIAVTARLYHTIALKSDGTVWTW 865

Query: 377 GGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYG 436
           G N +GQLG G     +LP  +    L +V   +++ G  HT  +  DG V+ WG+N   
Sbjct: 866 GRNIYGQLGDGSTTERSLP--VQVIGLTDV--IAIAGGYYHTIALKSDGAVWAWGYNGNN 921

Query: 437 QLG 439
           QLG
Sbjct: 922 QLG 924



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 123/464 (26%), Positives = 181/464 (39%), Gaps = 71/464 (15%)

Query: 38  LPLTVGSAWRDVCG--GGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLP 95
           +P+ VG    DV    GG    +A+     +  WG  ++ GQ  +  G       P  + 
Sbjct: 285 IPVKVGGL-SDVIAIAGGNAHTIALKSDGTVWAWGD-NEGGQ--LGDGSTTNRSTPVKVS 340

Query: 96  TEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFL 155
             A ++  A G++H + +   G V+TWG  E    G   GD ST          R +   
Sbjct: 341 GLADVIAIAGGYSHTIVLRSDGTVWTWGHNE----GGQLGDGST--------TNRSTPV- 387

Query: 156 TEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLV 215
             QVS  + V   +GG       +  G           A         GD         V
Sbjct: 388 --QVSGLADVIAIAGGVYHTIAVKSDGTM--------WAWGYNWYGQLGDGTTINSSTPV 437

Query: 216 TLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR-----------MVSS 264
            +N    +  +A G  HT+A+   G VW WG+   GQLG GS              M S 
Sbjct: 438 QVNGLTDVIAIAGGYYHTIAMKSDGAVWTWGFNYYGQLGDGSITNRSTPAQRSLSGMKSV 497

Query: 265 PHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTF 324
             P     S+     S+AL  G VN  G       +Y       G  + +  DA   ++ 
Sbjct: 498 ATPTVTTGSATCVSLSSALLNGWVNGNGVATTAWFDY-------GTSTGMYFDATKTISC 550

Query: 325 GWGLYGQCGQGSTDDELSP------NCVSSLLGIQIEG----------VAAGLWHTICIS 368
           G    G    G+T  +L+P         S  +G    G          ++AG +HT+ + 
Sbjct: 551 G---TGSTYVGATLGDLTPWTTYYCRIASQNIGGIYYGSETTFMPRTQISAGAYHTLTLK 607

Query: 369 SDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVF 428
            DG V+A+G N   QLG G     + P  +   +     + +++ G  HT  +  DG V+
Sbjct: 608 PDGTVWAYGANWNSQLGDGSTTDSSTPVQVSGLT----DAIAIAGGVYHTIALKSDGTVW 663

Query: 429 CWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
            WGWN  GQLG G  I+R+ P QV I       +A G +HT+ L
Sbjct: 664 TWGWNNSGQLGDGTTINRSTPVQV-IGLTDVIAIAGGDYHTIAL 706



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 53/148 (35%), Positives = 76/148 (51%), Gaps = 6/148 (4%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           I+ G  H+  +   G +  +G     Q G GST D  +P  VS L       +A G++HT
Sbjct: 596 ISAGAYHTLTLKPDGTVWAYGANWNSQLGDGSTTDSSTPVQVSGL--TDAIAIAGGVYHT 653

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           I + SDG V+ +G N  GQLG G     + P  +    L +V   +++ G  HT  +  D
Sbjct: 654 IALKSDGTVWTWGWNNSGQLGDGTTINRSTP--VQVIGLTDV--IAIAGGDYHTIALKSD 709

Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
           G V+ WG+N YGQLG G   +R+ P QV
Sbjct: 710 GTVWTWGFNYYGQLGGGATTNRSTPVQV 737



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 86/342 (25%), Positives = 135/342 (39%), Gaps = 73/342 (21%)

Query: 52   GGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAH 109
            GG    +A+     +  WGS     LG   +T   +  IP P    T   I+  A G+ H
Sbjct: 1096 GGDYHTIALKSDNTVWAWGSNSYGQLGDGTIT---NRSIPTPVTYLTN--IIAIAGGYVH 1150

Query: 110  CVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSS 169
             +A+   G V+ WG+         +G L  G+  ++     Q S LT+ ++   +   + 
Sbjct: 1151 TIALKSDGTVWAWGYNG-------YGQLGDGSTTNRST-PVQVSGLTDVIAIAGEYVHTV 1202

Query: 170  GGTSSGT------DGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRI 223
               S GT      +G G   +GS   R +  + +  +                      +
Sbjct: 1203 ALKSDGTVWAWGYNGYGQLGDGSTTNRSTPVQVSGLTD---------------------V 1241

Query: 224  ATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAAL 283
              +A G  HT+AL   G VW WG+   GQLG G+ I  + +P  +  +  +         
Sbjct: 1242 IAIAGGYVHTIALKSDGTVWTWGWNNSGQLGDGTTINRL-TPVQVSGLTDAI-------- 1292

Query: 284  SRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                                 IA G  H+  +     +  +G   YGQ G G+T + L+P
Sbjct: 1293 --------------------AIAGGDYHTIALKSDNTVWAWGSNSYGQLGDGTTINRLTP 1332

Query: 344  NCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLG 385
              VS L       +A G +HTI + SD  V+A+G N +GQLG
Sbjct: 1333 VQVSGL--TDAIAIAGGDYHTIALKSDNTVWAWGSNSYGQLG 1372



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 89/364 (24%), Positives = 145/364 (39%), Gaps = 57/364 (15%)

Query: 52  GGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCV 111
           GG    +A+     +  WG+ ++ GQ  +  G   +   P  +     ++  A G+AH +
Sbjct: 200 GGAYHTIALKSDGTVWAWGN-NEGGQ--LGDGSTTDRSTPVQVSGLTDVIAIAGGYAHTI 256

Query: 112 AVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG 171
           A+   G V+ WG  E    G   GD ST            +  +  +V   S V   +GG
Sbjct: 257 ALKSDGTVWAWGDNE----GGRLGDGST-----------TNRSIPVKVGGLSDVIAIAGG 301

Query: 172 TSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGR 231
            +     +  G           A    E    GD + +     V ++    +  +A G  
Sbjct: 302 NAHTIALKSDGTV--------WAWGDNEGGQLGDGSTTNRSTPVKVSGLADVIAIAGGYS 353

Query: 232 HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
           HT+ L   G VW WG+   GQLG GS     S+P  +  +                    
Sbjct: 354 HTIVLRSDGTVWTWGHNEGGQLGDGSTTNR-STPVQVSGLAD------------------ 394

Query: 292 GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                     V  IA G  H+  +   G +  +G+  YGQ G G+T +  +P  V+ L  
Sbjct: 395 ----------VIAIAGGVYHTIAVKSDGTMWAWGYNWYGQLGDGTTINSSTPVQVNGL-- 442

Query: 352 IQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSV 411
             +  +A G +HTI + SDG V+ +G N +GQLG G     + P       +++V + +V
Sbjct: 443 TDVIAIAGGYYHTIAMKSDGAVWTWGFNYYGQLGDGSITNRSTPAQRSLSGMKSVATPTV 502

Query: 412 SCGA 415
           + G+
Sbjct: 503 TTGS 506


>gi|299469793|emb|CBN76647.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 2478

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 89/291 (30%), Positives = 132/291 (45%), Gaps = 34/291 (11%)

Query: 213 CLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR---MVSSP---- 265
           CLV    G  +  VAAG  HT+ L   G+V+  GY   GQ G G+  R   +   P    
Sbjct: 256 CLVKPFEGREVVDVAAGNEHTVLLCSTGEVYTAGYNDNGQCGQGTTQRVGVLTRVPIDGG 315

Query: 266 -------------HPIPCIES----SYGKDRSAALSRGSVNSE---GPGFRVPGNYVKGI 305
                        H +  ++     S+G +    L +G+ +SE    P   + G  V   
Sbjct: 316 RKAVQVHAYNGCEHTLVVLDDGQMMSFGYNYRGQLGQGNTSSEPVPKPVRGLNGIRVTQA 375

Query: 306 ACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTI 365
           +C   HS +  D G + TFG   +GQ G G   D   P  V SL G +I  +A G +HT+
Sbjct: 376 SCSYYHSVIACDNGEVYTFGRNDFGQLGSGDVIDRKLPCLVESLRGQRITTLACGQYHTV 435

Query: 366 CISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP-SLENVHSKSVSCGARHTAVIADD 424
             + +  V + G N +GQLG   +  E+  + +     L+    + V CG  HT V+  +
Sbjct: 436 VSTLEIGVQSCGKNDYGQLGL--ESTESQRKFVAVKGKLDGAQVRHVRCGYYHTIVLTAE 493

Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNV---ACGWWHTLLL 472
             VF +G N YGQLGLG    R +     IEG   ++V   + G +HT+L+
Sbjct: 494 EHVFGFGRNDYGQLGLGHTTQR-VFGPTIIEGAQEKHVYRISAGCYHTVLI 543



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 120/256 (46%), Gaps = 32/256 (12%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G+R+   +    H++   D G+V+ +G    GQLG G  I        +PC+  S     
Sbjct: 369 GIRVTQASCSYYHSVIACDNGEVYTFGRNDFGQLGSGDVI-----DRKLPCLVES----- 418

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDD 339
                            + G  +  +ACG  H+ V T    + + G   YGQ G  ST+ 
Sbjct: 419 -----------------LRGQRITTLACGQYHTVVSTLEIGVQSCGKNDYGQLGLESTES 461

Query: 340 ELSPNCVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL-PRL 397
           +     V   L G Q+  V  G +HTI ++++  V+ FG N +GQLG G        P +
Sbjct: 462 QRKFVAVKGKLDGAQVRHVRCGYYHTIVLTAEEHVFGFGRNDYGQLGLGHTTQRVFGPTI 521

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEG 456
           ++    ++V+   +S G  HT +I  DG +F +G N +GQLG GD  +R+ P  V T  G
Sbjct: 522 IEGAQEKHVYR--ISAGCYHTVLIDADGMLFVFGRNHHGQLGTGDTNERHSPFPVSTFLG 579

Query: 457 CVPRNVACGWWHTLLL 472
                VA G++HT++L
Sbjct: 580 KRIAKVAAGFYHTIVL 595



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 88/343 (25%), Positives = 140/343 (40%), Gaps = 60/343 (17%)

Query: 34  LVVRLPLTVGSAWRDVCG-GGCGFAMAISDSRKLITWGST--DDLGQSYVTSGKHGEIPE 90
           ++ R+P+  G     V    GC   + + D  +++++G      LGQ   +S       E
Sbjct: 306 VLTRVPIDGGRKAVQVHAYNGCEHTLVVLDDGQMMSFGYNYRGQLGQGNTSS-------E 358

Query: 91  PFPLPTE----ASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKD 146
           P P P        + +A+  + H V   + GEVYT+G  +       FG L +G     D
Sbjct: 359 PVPKPVRGLNGIRVTQASCSYYHSVIACDNGEVYTFGRND-------FGQLGSG-----D 406

Query: 147 VFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRI-SLAKQTAESSSSGD 205
           V +R+   L E +  +   + + G   +       G +   +     L  ++ ES     
Sbjct: 407 VIDRKLPCLVESLRGQRITTLACGQYHTVVSTLEIGVQSCGKNDYGQLGLESTESQRK-- 464

Query: 206 ENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSP 265
                F  +     G ++  V  G  HT+ L+    V+G+G    GQLGLG   + V  P
Sbjct: 465 -----FVAVKGKLDGAQVRHVRCGYYHTIVLTAEEHVFGFGRNDYGQLGLGHTTQRVFGP 519

Query: 266 HPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFG 325
                IE +  K                       +V  I+ G  H+ +I   G L  FG
Sbjct: 520 ---TIIEGAQEK-----------------------HVYRISAGCYHTVLIDADGMLFVFG 553

Query: 326 WGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICIS 368
              +GQ G G T++  SP  VS+ LG +I  VAAG +HTI ++
Sbjct: 554 RNHHGQLGTGDTNERHSPFPVSTFLGKRIAKVAAGFYHTIVLT 596



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 81/202 (40%), Gaps = 53/202 (26%)

Query: 323 TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFG 382
           T G   YG+ G   T    +   V    G ++  VAAG  HT+ + S G+VY  G N  G
Sbjct: 235 TCGQNSYGELGHSDTGTRKTHCLVKPFEGREVVDVAAGNEHTVLLCSTGEVYTAGYNDNG 294

Query: 383 QLGTGGDQ-------------------------AETLPRLLDAPSLE------------N 405
           Q G G  Q                           TL  L D   +             N
Sbjct: 295 QCGQGTTQRVGVLTRVPIDGGRKAVQVHAYNGCEHTLVVLDDGQMMSFGYNYRGQLGQGN 354

Query: 406 VHSKSV---------------SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
             S+ V               SC   H+ +  D+G+V+ +G N +GQLG GDVIDR +P 
Sbjct: 355 TSSEPVPKPVRGLNGIRVTQASCSYYHSVIACDNGEVYTFGRNDFGQLGSGDVIDRKLPC 414

Query: 451 QV-TIEGCVPRNVACGWWHTLL 471
            V ++ G     +ACG +HT++
Sbjct: 415 LVESLRGQRITTLACGQYHTVV 436


>gi|294462324|gb|ADE76711.1| unknown [Picea sitchensis]
          Length = 390

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 112/432 (25%), Positives = 174/432 (40%), Gaps = 115/432 (26%)

Query: 57  AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEG 116
           ++AI +  +L TWG        +    K    P          IV+AA G  HC+AV + 
Sbjct: 52  SLAICEDGQLFTWGWNQRGTLGHPPESKTESTPTQVKALENVKIVQAAIGGWHCLAVDDQ 111

Query: 117 GEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGT 176
           G+ Y WG       G  +G          +  ER+                         
Sbjct: 112 GQAYAWG-------GNEYGQCG-------EEPERK------------------------- 132

Query: 177 DGRGSGEEGSK--RRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTL 234
                 E+GSK  RR I++ ++ A                    P +R+  VAAGG H++
Sbjct: 133 ------EDGSKVLRRDIAIPQRCA--------------------PQLRVRQVAAGGTHSV 166

Query: 235 ALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPG 294
            L+  G VW WG     Q      I+ +S+P  +  +E+                     
Sbjct: 167 VLTHNGHVWTWG-----QPWPPGDIKQISTPVRVQGLEN--------------------- 200

Query: 295 FRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQI 354
                  V+ IA G  H+  + + G +  +G   YGQ G G T     P  V  L G+ +
Sbjct: 201 -------VQLIAVGAFHNLALLEEGEVWAWGNNEYGQLGTGDTQPRSQPVPVQGLSGLIL 253

Query: 355 EGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ-AETLPRLLDAPSLENVHSKSVSC 413
             +AAG WH+  +++D +VYA+G  + G+LG G D+ ++ +P+ +   + E +    VSC
Sbjct: 254 ADIAAGGWHSTALTTDAEVYAWGRGEHGRLGFGDDKSSKMVPQKVHLLAGETI--AQVSC 311

Query: 414 GARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRN------------ 461
           G  H+     DG++F +G   +G+LG G  +    P +V I    P+N            
Sbjct: 312 GGTHSVARTADGRIFSYGRADHGRLGYGRKVTTGHPMEVPIGIRPPKNAAENSGCWFVKL 371

Query: 462 VACGWWHTLLLA 473
           VACG  HTL  A
Sbjct: 372 VACGGRHTLATA 383



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 115/287 (40%), Gaps = 83/287 (28%)

Query: 242 VWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNY 301
           V  WG G +GQLG+G+                   +D+    S  ++ S        G  
Sbjct: 7   VLAWGSGEDGQLGVGNM------------------EDKDWVCSIQALASH-------GKR 41

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ-GSTDDELSPNCVSSLLGIQIEGVAAG 360
           V  +  G R+S  I + G L T+GW   G  G    +  E +P  V +L  ++I   A G
Sbjct: 42  VVSVVAGSRNSLAICEDGQLFTWGWNQRGTLGHPPESKTESTPTQVKALENVKIVQAAIG 101

Query: 361 LWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLD---------APSL-------- 403
            WH + +   G  YA+GGN++GQ G   ++ E   ++L          AP L        
Sbjct: 102 GWHCLAVDDQGQAYAWGGNEYGQCGEEPERKEDGSKVLRRDIAIPQRCAPQLRVRQVAAG 161

Query: 404 -------------------------------------ENVHSKSVSCGARHTAVIADDGK 426
                                                ENV  + ++ GA H   + ++G+
Sbjct: 162 GTHSVVLTHNGHVWTWGQPWPPGDIKQISTPVRVQGLENV--QLIAVGAFHNLALLEEGE 219

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
           V+ WG N+YGQLG GD   R+ P  V  + G +  ++A G WH+  L
Sbjct: 220 VWAWGNNEYGQLGTGDTQPRSQPVPVQGLSGLILADIAAGGWHSTAL 266



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 2/108 (1%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           + SD  V A+G  + GQLG G  + +     + A +       SV  G+R++  I +DG+
Sbjct: 1   MESDHAVLAWGSGEDGQLGVGNMEDKDWVCSIQALASHGKRVVSVVAGSRNSLAICEDGQ 60

Query: 427 VFCWGWNKYGQLGL-GDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLL 472
           +F WGWN+ G LG   +    + P+QV  +E       A G WH L +
Sbjct: 61  LFTWGWNQRGTLGHPPESKTESTPTQVKALENVKIVQAAIGGWHCLAV 108



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 74/282 (26%), Positives = 111/282 (39%), Gaps = 74/282 (26%)

Query: 47  RDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAG 106
           R V  GG   ++ ++ +  + TWG            G   +I  P  +    ++   A G
Sbjct: 156 RQVAAGGT-HSVVLTHNGHVWTWGQP-------WPPGDIKQISTPVRVQGLENVQLIAVG 207

Query: 107 WAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVS 166
             H +A+ E GEV+ WG  E       +G L TG     D   R      + +S      
Sbjct: 208 AFHNLALLEEGEVWAWGNNE-------YGQLGTG-----DTQPRSQPVPVQGLSGLILAD 255

Query: 167 RSSGG---TSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
            ++GG   T+  TD      G GE G    R+             D++    P  V L  
Sbjct: 256 IAAGGWHSTALTTDAEVYAWGRGEHG----RLGFGD---------DKSSKMVPQKVHLLA 302

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G  IA V+ GG H++A +  G+++ +G    G+LG G   R V++ HP+           
Sbjct: 303 GETIAQVSCGGTHSVARTADGRIFSYGRADHGRLGYG---RKVTTGHPM----------- 348

Query: 280 SAALSRGSVNSEGP-GFRVPGN--------YVKGIACGGRHS 312
                      E P G R P N        +VK +ACGGRH+
Sbjct: 349 -----------EVPIGIRPPKNAAENSGCWFVKLVACGGRHT 379


>gi|281202576|gb|EFA76778.1| regulator of chromosome condensation domain-containing protein
           [Polysphondylium pallidum PN500]
          Length = 2305

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 115/419 (27%), Positives = 177/419 (42%), Gaps = 56/419 (13%)

Query: 57  AMAISDSRKLITWGSTDDLGQSYVTSGKHGE-IPEPFPLPTEASIVKAAAGWAHCVAVTE 115
           A  +  SR L+TWGS       + +  K  +  PE  P    + I   + G  +  A+TE
Sbjct: 535 ATQLDTSRGLMTWGSGSYCKLGFKSVEKDSQPTPERLPNFNISDICSISCGSYYSAALTE 594

Query: 116 GGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSG 175
            G+VY WG             L  GT  D  +  ++   L E V        S+   S+G
Sbjct: 595 NGDVYMWGRGSV--KNPPIATLGNGT-FDDQLLPQKVESLQEIVVISIGFYHSAAVKSNG 651

Query: 176 TDGR-GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTL 234
                G GE+G                  GD      P +V       +  V  G +HT+
Sbjct: 652 ELLTWGCGEDGQL--------------GHGDVFNQPIPKVVQSITSHWVTQVQCGEKHTI 697

Query: 235 ALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPG 294
            L+  G+V+ WG    GQLGLG   +  +     P + +S  K                 
Sbjct: 698 CLTKNGKVFTWGTSEYGQLGLGDTQKNCT-----PMLVTSLDK----------------- 735

Query: 295 FRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQI 354
                 ++  IACG  H+AV+T+   +L FG G       GS +    P  V SL  + I
Sbjct: 736 -----YHIIQIACGATHNAVLTNNREVLVFGNG----AAMGSANIISIPIMVPSLKIMNI 786

Query: 355 EGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
           E ++ G + T  ++  GDVY +G  Q  +LG G   +E  P+L++  +L N   + +SCG
Sbjct: 787 ERLSCGHYSTAALTECGDVYTWGSGQ--ELGHGHGTSEAHPKLVE--TLRNQSIRQISCG 842

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLL 472
            RH A + D GK++  G + +GQLG     D+N P ++ ++      +++CG  H   L
Sbjct: 843 GRHMAFLTDSGKIYTSGKDPFGQLGHA-AGDQNRPKKIDSLLKTTFMSISCGENHNAAL 900


>gi|291221016|ref|XP_002730519.1| PREDICTED: predicted protein-like, partial [Saccoglossus
           kowalevskii]
          Length = 353

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 66/178 (37%), Positives = 94/178 (52%), Gaps = 4/178 (2%)

Query: 295 FRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQI 354
           F +  +    I+CG  HSA+IT++G L TFG   +GQ G G       P CV SL    +
Sbjct: 31  FWIRNDKAMHISCGDEHSAIITESGRLYTFGSNDWGQLGLGHMKPTTKPGCVKSLKQEGV 90

Query: 355 EGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
             VA G  HTI  +  G +Y+FG    GQLGTG  Q  T P+L++ P  +    K +S G
Sbjct: 91  NLVACGRSHTIVCTKAGRLYSFGAGSDGQLGTGDAQCATSPQLINLPEQK---YKLLSAG 147

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
             H+A +  DG ++ WG    GQLGLG+      P ++     V   V+CG++HT ++
Sbjct: 148 TDHSAALTTDGTLYMWGSGSEGQLGLGNTDSVETPKELKFHSSVSW-VSCGYYHTAIV 204



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 124/256 (48%), Gaps = 38/256 (14%)

Query: 203 SGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMV 262
           +GD   +  P L+ L P  +   ++AG  H+ AL+  G ++ WG G EGQLGLG+    V
Sbjct: 122 TGDAQCATSPQLINL-PEQKYKLLSAGTDHSAALTTDGTLYMWGSGSEGQLGLGN-TDSV 179

Query: 263 SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL 322
            +P  +    S                            V  ++CG  H+A++TD G L 
Sbjct: 180 ETPKELKFHSS----------------------------VSWVSCGYYHTAIVTDDGKLY 211

Query: 323 TFGWGLYGQCG--QGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
           TFG   +G+ G  +   +D  +P  V S+   +I+ VA G  HT  IS  G++Y FG   
Sbjct: 212 TFGEKEFGKLGLTEDQLEDTTTPKHVESITE-KIKLVACGGAHTAVISDVGNLYTFGDGM 270

Query: 381 FGQLGTGGDQAE-TLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG 439
            GQLG G    + +LP+      L     K VSCG  HTAVI + G ++ +G  ++G+LG
Sbjct: 271 HGQLGNGPSLLQLSLPQ--KVARLSEHKCKYVSCGDNHTAVITEKGAMYTFGDGRHGKLG 328

Query: 440 LGDVIDRNI--PSQVT 453
           + +    NI  P +V+
Sbjct: 329 ISEEDFCNIFKPCKVS 344



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 78/254 (30%), Positives = 125/254 (49%), Gaps = 37/254 (14%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  VA G  HT+  +  G+++ +G G +GQLG G   +  +SP  I   E  Y       
Sbjct: 90  VNLVACGRSHTIVCTKAGRLYSFGAGSDGQLGTGD-AQCATSPQLINLPEQKY------- 141

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                               K ++ G  HSA +T  G L  +G G  GQ G G+TD   +
Sbjct: 142 --------------------KLLSAGTDHSAALTTDGTLYMWGSGSEGQLGLGNTDSVET 181

Query: 343 PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAE--TLPRLLDA 400
           P  +       +  V+ G +HT  ++ DG +Y FG  +FG+LG   DQ E  T P+ +++
Sbjct: 182 PKELK--FHSSVSWVSCGYYHTAIVTDDGKLYTFGEKEFGKLGLTEDQLEDTTTPKHVES 239

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG-DVIDRNIPSQVT-IEGCV 458
            + E +  K V+CG  HTAVI+D G ++ +G   +GQLG G  ++  ++P +V  +    
Sbjct: 240 IT-EKI--KLVACGGAHTAVISDVGNLYTFGDGMHGQLGNGPSLLQLSLPQKVARLSEHK 296

Query: 459 PRNVACGWWHTLLL 472
            + V+CG  HT ++
Sbjct: 297 CKYVSCGDNHTAVI 310



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 61/136 (44%), Gaps = 28/136 (20%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
           +I  VA GG HT  +SD+G ++ +G G  GQLG G  +  +S P  +             
Sbjct: 243 KIKLVACGGAHTAVISDVGNLYTFGDGMHGQLGNGPSLLQLSLPQKVA------------ 290

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD--D 339
                         R+  +  K ++CG  H+AVIT+ GA+ TFG G +G+ G    D  +
Sbjct: 291 --------------RLSEHKCKYVSCGDNHTAVITEKGAMYTFGDGRHGKLGISEEDFCN 336

Query: 340 ELSPNCVSSLLGIQIE 355
              P  VS      ++
Sbjct: 337 IFKPCKVSRFTSFDVQ 352



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 12/165 (7%)

Query: 313 AVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGD 372
           A I + GA+ TFG   +        D+  S   + +   + I   + G  H+  I+  G 
Sbjct: 7   ADIPETGAIFTFGKSRFA-------DNLPSKFWIRNDKAMHI---SCGDEHSAIITESGR 56

Query: 373 VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGW 432
           +Y FG N +GQLG G  +  T P  + +   E V+   V+CG  HT V    G+++ +G 
Sbjct: 57  LYTFGSNDWGQLGLGHMKPTTKPGCVKSLKQEGVNL--VACGRSHTIVCTKAGRLYSFGA 114

Query: 433 NKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAVPPT 477
              GQLG GD      P  + +     + ++ G  H+  L    T
Sbjct: 115 GSDGQLGTGDAQCATSPQLINLPEQKYKLLSAGTDHSAALTTDGT 159



 Score = 42.7 bits (99), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 57/236 (24%), Positives = 94/236 (39%), Gaps = 48/236 (20%)

Query: 32  SPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEP 91
           SP ++ LP         +   G   + A++    L  WGS  + GQ  +  G    +  P
Sbjct: 130 SPQLINLP----EQKYKLLSAGTDHSAALTTDGTLYMWGSGSE-GQ--LGLGNTDSVETP 182

Query: 92  FPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFE-- 149
             L   +S+   + G+ H   VT+ G++YT+G KE       FG L    GL +D  E  
Sbjct: 183 KELKFHSSVSWVSCGYYHTAIVTDDGKLYTFGEKE-------FGKL----GLTEDQLEDT 231

Query: 150 ---RQSSFLTEQVS------PRSQVSRSSGGTSSGTDG-RGSGEEGSKRRRISLAKQTAE 199
              +    +TE++         + V    G   +  DG  G    G    ++SL ++ A 
Sbjct: 232 TTPKHVESITEKIKLVACGGAHTAVISDVGNLYTFGDGMHGQLGNGPSLLQLSLPQKVAR 291

Query: 200 SSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGL 255
                   LS   C            V+ G  HT  +++ G ++ +G G  G+LG+
Sbjct: 292 --------LSEHKC----------KYVSCGDNHTAVITEKGAMYTFGDGRHGKLGI 329


>gi|413951295|gb|AFW83944.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 1131

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 64/171 (37%), Positives = 100/171 (58%), Gaps = 4/171 (2%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ I+CGGRH+A++T  G + ++G    G+ G G   D   P  + +L  + IE VA G 
Sbjct: 351 VQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVSQPKLIDALSHMNIELVACGE 410

Query: 362 WHTICISSDGDVYAFGGN--QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
           +HT  ++  GD+Y +G    +FG LG G D +  +P+ ++ P LE +H  S+SCG  HTA
Sbjct: 411 YHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKHVNGP-LEGIHVSSISCGPWHTA 469

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
           V+   G++F +G   +G LG GD    ++P +V +++G      ACG WHT
Sbjct: 470 VVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESLKGLRTVRAACGVWHT 520



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 85/279 (30%), Positives = 123/279 (44%), Gaps = 49/279 (17%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYG--GEGQLGLGSRIRMVSSPHPIP 269
           P L+     + I  VA G  HT A++  G ++ WG G    G LG G+ I      H +P
Sbjct: 392 PKLIDALSHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDI-----SHWVP 446

Query: 270 CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
                             VN  GP   + G +V  I+CG  H+AV+T AG L TFG G +
Sbjct: 447 ----------------KHVN--GP---LEGIHVSSISCGPWHTAVVTSAGQLFTFGDGSF 485

Query: 330 GQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI------------SSDGDVYAFG 377
           G  G G  +    P  V SL G++    A G+WHT  +             S G ++ +G
Sbjct: 486 GVLGHGDRESISVPREVESLKGLRTVRAACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWG 545

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQ 437
               G+LG G    + +P  + A  L   +   V+CG   T  +   G V+  G   YGQ
Sbjct: 546 DGDKGRLGHGDKGPKLVPTCVAA--LVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQ 603

Query: 438 LGLGDVIDRNIPSQVTIEGCVPRN----VACGWWHTLLL 472
           LG     D  +P  V +EG + +N    ++CG +H  +L
Sbjct: 604 LGNAQA-DGMLP--VRVEGKLHKNFVEEISCGAYHVAVL 639



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 74/138 (53%), Gaps = 6/138 (4%)

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D L P  +   + + ++ ++ G  H   ++  G++Y++G    G+LG G D   + P+L+
Sbjct: 336 DCLVPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVSQPKLI 395

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCW--GWNKYGQLGLGDVIDRNIPSQVT--I 454
           DA S  N+  + V+CG  HT  +   G ++ W  G  K+G LG G+ I   +P  V   +
Sbjct: 396 DALSHMNI--ELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKHVNGPL 453

Query: 455 EGCVPRNVACGWWHTLLL 472
           EG    +++CG WHT ++
Sbjct: 454 EGIHVSSISCGPWHTAVV 471



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 98/231 (42%), Gaps = 43/231 (18%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDI------------GQVWGWGYGGEG 251
           GD    + P  V    G+R    A G  HT A+ ++            G+++ WG G +G
Sbjct: 491 GDRESISVPREVESLKGLRTVRAACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKG 550

Query: 252 QLGLGSRIRMVSSPHPIP-CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGR 310
           +LG G +      P  +P C+         AAL             V  N+ + +ACG  
Sbjct: 551 RLGHGDK-----GPKLVPTCV---------AAL-------------VEPNFCQ-VACGHC 582

Query: 311 HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
            +  +T +G + T G  +YGQ G    D  L       L    +E ++ G +H   ++S 
Sbjct: 583 LTVALTTSGHVYTMGSAVYGQLGNAQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSK 642

Query: 371 GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
            +VY +G    G+LG G    +  P L++A  L++   + V CG   TA I
Sbjct: 643 TEVYTWGKGANGRLGHGDTDDKNTPTLVEA--LKDKQVRIVVCGINFTAAI 691


>gi|386720863|ref|YP_006187188.1| hypothetical protein B2K_01550 [Paenibacillus mucilaginosus K02]
 gi|384087987|gb|AFH59423.1| hypothetical protein B2K_01550 [Paenibacillus mucilaginosus K02]
          Length = 1164

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 84/248 (33%), Positives = 125/248 (50%), Gaps = 28/248 (11%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLG---SRIRMVSSPHPIPCIESSYGKDRSAA 282
           V+AG  H+LAL   G VW +GY G GQLG G   S+   V        +  + GKD S A
Sbjct: 734 VSAGENHSLALKSDGTVWAFGYNGYGQLGDGTTSSQRTPVQVKDLTGVVAIAAGKDFSLA 793

Query: 283 L-SRGSV------------NSEGPGFRVPGNY-----VKGIACGGRHSAVITDAGALLTF 324
           L S G+V            N       VP        VK IA G  H   +   G++  +
Sbjct: 794 LKSDGTVWSWGQNTYGELGNGTTTRSSVPVQVALLTDVKAIAAGDYHGVALKKDGSVFAW 853

Query: 325 GWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQL 384
           G+   G+ G  ST  + +P   S + GI+  G+AAG +HT+ + SDG V+++G N +GQL
Sbjct: 854 GYNGNGELGNSSTISQSTP-VQSGVTGIK--GIAAGPYHTLALKSDGTVWSWGYNGYGQL 910

Query: 385 GTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVI 444
           G G + + ++P  +  P L ++   S++ G   +    +DG ++ WG N  GQLG G  +
Sbjct: 911 GNGNNTSRSVPAAI--PGLASI--ASIAAGENQSIAYGNDGILYSWGRNANGQLGNGTTV 966

Query: 445 DRNIPSQV 452
           D N+P +V
Sbjct: 967 DTNVPHKV 974



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/243 (32%), Positives = 114/243 (46%), Gaps = 36/243 (14%)

Query: 230 GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVN 289
           G HT+ +   G VWGWGY G GQLG G+                             S +
Sbjct: 638 GNHTMFIKSDGTVWGWGYNGHGQLGTGT-----------------------------SNS 668

Query: 290 SEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSL 349
           +  PG  +    +K IA G  H+  +   G L T+G+  YGQ G  ST    SP  VS+L
Sbjct: 669 TSVPGKVINLTGMKMIAGGENHTVALRSDGTLHTWGYNGYGQLGDDSTTTRYSPVQVSTL 728

Query: 350 LGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSK 409
                  V+AG  H++ + SDG V+AFG N +GQLG G   ++  P  +    L  V   
Sbjct: 729 --TNWTAVSAGENHSLALKSDGTVWAFGYNGYGQLGDGTTSSQRTP--VQVKDLTGV--V 782

Query: 410 SVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHT 469
           +++ G   +  +  DG V+ WG N YG+LG G     ++P QV +   V + +A G +H 
Sbjct: 783 AIAAGKDFSLALKSDGTVWSWGQNTYGELGNGTTTRSSVPVQVALLTDV-KAIAAGDYHG 841

Query: 470 LLL 472
           + L
Sbjct: 842 VAL 844



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 125/270 (46%), Gaps = 39/270 (14%)

Query: 203 SGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMV 262
           +G  N ++ P  V    G+++  +A G  HT+AL   G +  WGY G GQLG  S     
Sbjct: 663 TGTSNSTSVPGKVINLTGMKM--IAGGENHTVALRSDGTLHTWGYNGYGQLGDDSTTTRY 720

Query: 263 SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL 322
            SP  +  +                            N+   ++ G  HS  +   G + 
Sbjct: 721 -SPVQVSTLT---------------------------NWT-AVSAGENHSLALKSDGTVW 751

Query: 323 TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFG 382
            FG+  YGQ G G+T  + +P  V  L G+    +AAG   ++ + SDG V+++G N +G
Sbjct: 752 AFGYNGYGQLGDGTTSSQRTPVQVKDLTGVV--AIAAGKDFSLALKSDGTVWSWGQNTYG 809

Query: 383 QLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGD 442
           +LG G     ++P  +    L +V  K+++ G  H   +  DG VF WG+N  G+LG   
Sbjct: 810 ELGNGTTTRSSVP--VQVALLTDV--KAIAAGDYHGVALKKDGSVFAWGYNGNGELGNSS 865

Query: 443 VIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
            I ++ P Q  + G   + +A G +HTL L
Sbjct: 866 TISQSTPVQSGVTGI--KGIAAGPYHTLAL 893



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 87/202 (43%), Gaps = 34/202 (16%)

Query: 203 SGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMV 262
           +G    S+ P  V L   V+   +AAG  H +AL   G V+ WGY G G+LG  S I   
Sbjct: 813 NGTTTRSSVPVQVALLTDVKA--IAAGDYHGVALKKDGSVFAWGYNGNGELGNSSTISQ- 869

Query: 263 SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL 322
           S+P                      V S   G       +KGIA G  H+  +   G + 
Sbjct: 870 STP----------------------VQSGVTG-------IKGIAAGPYHTLALKSDGTVW 900

Query: 323 TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFG 382
           ++G+  YGQ G G+      P  +  L    I  +AAG   +I   +DG +Y++G N  G
Sbjct: 901 SWGYNGYGQLGNGNNTSRSVPAAIPGL--ASIASIAAGENQSIAYGNDGILYSWGRNANG 958

Query: 383 QLGTGGDQAETLPRLLDAPSLE 404
           QLG G      +P  +  P++ 
Sbjct: 959 QLGNGTTVDTNVPHKVIGPNIN 980



 Score = 40.8 bits (94), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 1/63 (1%)

Query: 410 SVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHT 469
           +VS    HT  I  DG V+ WG+N +GQLG G     ++P +V I     + +A G  HT
Sbjct: 633 AVSLLGNHTMFIKSDGTVWGWGYNGHGQLGTGTSNSTSVPGKV-INLTGMKMIAGGENHT 691

Query: 470 LLL 472
           + L
Sbjct: 692 VAL 694


>gi|159037224|ref|YP_001536477.1| chromosome condensation regulator RCC1 [Salinispora arenicola
           CNS-205]
 gi|157916059|gb|ABV97486.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
           CNS-205]
          Length = 558

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 116/421 (27%), Positives = 166/421 (39%), Gaps = 60/421 (14%)

Query: 63  SRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTW 122
           S  ++ WG+ +++GQ    S      P    LP + ++   A G +H +A+T  G V  W
Sbjct: 56  SDTILAWGA-NNVGQLGDGSTIARNAPVAVSLPPDTTVTAVAGGDSHSLALTSAGAVLAW 114

Query: 123 GWKECVPSGRVFGDLSTGTGLDKDV-----FERQSSFLTEQVSPRSQVSRSSGGTSSGTD 177
           G          FG L TG  L+  V         ++ +    S    ++ +S G      
Sbjct: 115 GENN-------FGQLGTGNNLNSSVPITVALPPDTTVVAIAASHGHSLALTSAGAVLAWG 167

Query: 178 GRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS 237
               G+ G+                 G+   S  P  V L PG  +AT+AAG  H+LA++
Sbjct: 168 ANNVGQLGN-----------------GNTFNSNTPVTVNLPPGTTVATIAAGTNHSLAIT 210

Query: 238 DIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRV 297
             G    WG  G GQLG  S     +S  PI                             
Sbjct: 211 STGAALAWGGNGNGQLGNNST---ATSLEPIAVTLP------------------------ 243

Query: 298 PGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGV 357
           P   +  IA G  +S  IT  G  L +G    GQ G G+  D L P  V+   G  I  +
Sbjct: 244 PSTTITAIAAGSSYSLAITSTGTALAWGGNSNGQLGTGNNADSLIPIAVALPPGTTITSI 303

Query: 358 AAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARH 417
           AAG  H++ ++S G   A+GGN  GQLG G       P +++ P    + +     G  H
Sbjct: 304 AAGFTHSLAVTSTGTALAWGGNSRGQLGIGTTTNSDTPVIVNLPPDTTITTN--DGGFFH 361

Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACGWWHTLLLAVPP 476
           +      G    WG N  GQLG G+  +   P  V +  G     +A G  H+L L  PP
Sbjct: 362 SLGSMSTGAALAWGNNFSGQLGTGNNTNSLDPIAVALPSGTKITTIAAGGGHSLALVAPP 421

Query: 477 T 477
           T
Sbjct: 422 T 422


>gi|443704116|gb|ELU01328.1| hypothetical protein CAPTEDRAFT_228560 [Capitella teleta]
          Length = 1874

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/243 (33%), Positives = 118/243 (48%), Gaps = 31/243 (12%)

Query: 232  HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
            H+LAL++ G+V+ WG G  G+LG G+  R    P  I  ++                   
Sbjct: 1087 HSLALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQ------------------- 1126

Query: 292  GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                   G  V  IACG +HSAV+T  G LLTFG G YG+ G G+  +  +P  V +L  
Sbjct: 1127 -------GEEVIQIACGFKHSAVVTVDGKLLTFGNGDYGRLGLGTVCNRKTPERVKALEN 1179

Query: 352  IQIEGVAAGLWHTICISSDGD-VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
              I  VA GL HT+C+S+DG   +AFG   +G+LG G   A++ P  ++A  L  +  K 
Sbjct: 1180 YHIGHVACGLNHTVCVSADGSTTWAFGDGDYGKLGLGNTSAKSTPVKIEA--LSGLKVKK 1237

Query: 411  VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            V+CG + +  +  DG V  WG ++        +     P +V T+ G     V  G  HT
Sbjct: 1238 VACGTQFSVALTRDGFVLTWGQDRLIGQTEAQMRGHCTPQKVTTLAGHFIEEVVVGSEHT 1297

Query: 470  LLL 472
            L L
Sbjct: 1298 LAL 1300



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 60/172 (34%), Positives = 96/172 (55%), Gaps = 6/172 (3%)

Query: 303  KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL- 361
            + I CG   + VI   G +L  G G YG+ GQG++DD  S   VS+L G  +  +   + 
Sbjct: 1024 QQIICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHSLTIVSALQGFVVTQLVTSVG 1083

Query: 362  --WHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
               H++ ++  G+V+++G   +G+LG G    +  PR ++A   E V    ++CG +H+A
Sbjct: 1084 SDGHSLALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEV--IQIACGFKHSA 1141

Query: 420  VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTL 470
            V+  DGK+  +G   YG+LGLG V +R  P +V  +E     +VACG  HT+
Sbjct: 1142 VVTVDGKLLTFGNGDYGRLGLGTVCNRKTPERVKALENYHIGHVACGLNHTV 1193



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 110/408 (26%), Positives = 167/408 (40%), Gaps = 85/408 (20%)

Query: 30   ILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISD--------SRKLITWGSTDDLGQSYVT 81
            +L+PL      +  SA + +CG  C F +  +         S   +  G++DDL    + 
Sbjct: 1011 VLTPLHTS---SFSSAQQIICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHSLTIV 1067

Query: 82   SGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGT 141
            S   G +           +V +     H +A+TE GEV++WG  +       +G L  G 
Sbjct: 1068 SALQGFVV--------TQLVTSVGSDGHSLALTESGEVFSWGDGD-------YGKLGHGN 1112

Query: 142  GLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGT---DGR----GSGEEGSKRRRISLA 194
              D+    RQ     E +     +  + G   S     DG+    G+G+ G    R+ L 
Sbjct: 1113 S-DRQRRPRQ----IEALQGEEVIQIACGFKHSAVVTVDGKLLTFGNGDYG----RLGLG 1163

Query: 195  KQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS-DIGQVWGWGYGGEGQL 253
                  +    + L  +           I  VA G  HT+ +S D    W +G G  G+L
Sbjct: 1164 TVCNRKTPERVKALENY----------HIGHVACGLNHTVCVSADGSTTWAFGDGDYGKL 1213

Query: 254  GLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSA 313
            GLG+     +S    P         +  ALS              G  VK +ACG + S 
Sbjct: 1214 GLGN-----TSAKSTPV--------KIEALS--------------GLKVKKVACGTQFSV 1246

Query: 314  VITDAGALLTFGWG-LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGD 372
             +T  G +LT+G   L GQ  +       +P  V++L G  IE V  G  HT+ ++SDG+
Sbjct: 1247 ALTRDGFVLTWGQDRLIGQ-TEAQMRGHCTPQKVTTLAGHFIEEVVVGSEHTLALTSDGN 1305

Query: 373  VYAFGGNQFGQLGTGGDQAETLPRLLDAP-SLENVHSKSVSCGARHTA 419
            V+ +G N  GQLG G       P+LL    S E +  K +S G  H+A
Sbjct: 1306 VWGWGLNADGQLGLGHTGTVREPQLLGGLGSSEPI--KQISAGRTHSA 1351


>gi|350396381|ref|XP_003484535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
           impatiens]
          Length = 1088

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 111/376 (29%), Positives = 160/376 (42%), Gaps = 63/376 (16%)

Query: 88  IPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGD--LSTGTGLDK 145
           +P        + I + A G  + V +T  G++Y+ G  +    G   G   L    GLD 
Sbjct: 56  VPCQVDFKKASEIQQIACGENYTVVITHDGKIYSCGNNDYGQLGHERGRKRLQLILGLDA 115

Query: 146 DVFERQS--SFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSS 203
            VF++ +  ++ T  V+   Q+  S G  S G  G  S             K   E S  
Sbjct: 116 FVFKKVACGAYHTIAVNEWGQLF-SWGSNSEGQLGLNS-------------KNFMECS-- 159

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
                   P +V       I  VA G +H LAL++ G+++ WG   EGQLGLG  IR   
Sbjct: 160 --------PRMVKTLGTSIIVQVACGMKHALALTNNGELYSWGSNSEGQLGLGVDIRSEV 211

Query: 264 SPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLT 323
            P  I  +                         VP   +  IACGG HS  I+ +GA+  
Sbjct: 212 KPKLINTLAG-----------------------VP---IAFIACGGYHSIAISKSGAI-- 243

Query: 324 FGWG--LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
           FGWG   +GQ G   T +   P+ + +L   +I   A G   ++ ++ DG V+  G   +
Sbjct: 244 FGWGKNTFGQLGLNDTQNRNLPHQLQTLRNAKICYAACGEEFSVFLTVDGGVFTCGAGMY 303

Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLGL 440
           GQLG G +  E LPR      L       +SCG RHT A++   G+V+ WG    GQLG 
Sbjct: 304 GQLGHGSNNNEILPR--QVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGAGQLGN 361

Query: 441 GDVIDRNIPSQVTIEG 456
                R+IP+   + G
Sbjct: 362 NST--RSIPTPQVVHG 375



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 85/314 (27%), Positives = 127/314 (40%), Gaps = 71/314 (22%)

Query: 102 KAAAGWAHCVAVTEGGEVYTWG-------------WKECVPSGRVFGDLSTGTGLDKDVF 148
           K A G  H +AV E G++++WG             + EC P  R+   L T   +     
Sbjct: 120 KVACGAYHTIAVNEWGQLFSWGSNSEGQLGLNSKNFMECSP--RMVKTLGTSIIVQVACG 177

Query: 149 ERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENL 208
            + +  LT      S  S S G    G D R   +                         
Sbjct: 178 MKHALALTNNGELYSWGSNSEGQLGLGVDIRSEVK------------------------- 212

Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
              P L+    GV IA +A GG H++A+S  G ++GWG    GQLGL    +  + PH +
Sbjct: 213 ---PKLINTLAGVPIAFIACGGYHSIAISKSGAIFGWGKNTFGQLGLND-TQNRNLPHQL 268

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL 328
             +       R+A +                      ACG   S  +T  G + T G G+
Sbjct: 269 QTL-------RNAKICYA-------------------ACGEEFSVFLTVDGGVFTCGAGM 302

Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTI-CISSDGDVYAFGGNQFGQLGTG 387
           YGQ G GS ++E+ P  V  L+G  +  ++ G  HT+  + S G VYA+G    GQLG  
Sbjct: 303 YGQLGHGSNNNEILPRQVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGAGQLGNN 362

Query: 388 GDQAETLPRLLDAP 401
             ++   P+++  P
Sbjct: 363 STRSIPTPQVVHGP 376



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 101/226 (44%), Gaps = 55/226 (24%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ--------------------------- 334
           ++ IACG  ++ VIT  G + + G   YGQ G                            
Sbjct: 68  IQQIACGENYTVVITHDGKIYSCGNNDYGQLGHERGRKRLQLILGLDAFVFKKVACGAYH 127

Query: 335 -------------GSTDD-----------ELSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
                        GS  +           E SP  V +L    I  VA G+ H + ++++
Sbjct: 128 TIAVNEWGQLFSWGSNSEGQLGLNSKNFMECSPRMVKTLGTSIIVQVACGMKHALALTNN 187

Query: 371 GDVYAFGGNQFGQLGTGGD-QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFC 429
           G++Y++G N  GQLG G D ++E  P+L++  +L  V    ++CG  H+  I+  G +F 
Sbjct: 188 GELYSWGSNSEGQLGLGVDIRSEVKPKLIN--TLAGVPIAFIACGGYHSIAISKSGAIFG 245

Query: 430 WGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLAV 474
           WG N +GQLGL D  +RN+P Q+ T+        ACG   ++ L V
Sbjct: 246 WGKNTFGQLGLNDTQNRNLPHQLQTLRNAKICYAACGEEFSVFLTV 291



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 56/159 (35%), Positives = 77/159 (48%), Gaps = 16/159 (10%)

Query: 324 FGWG--LYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN 379
           F WG   +G+ G G  +DE  L P  V      +I+ +A G  +T+ I+ DG +Y+ G N
Sbjct: 34  FCWGNTRHGELGLGGIEDEIILVPCQVDFKKASEIQQIACGENYTVVITHDGKIYSCGNN 93

Query: 380 QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG 439
            +GQLG          RL     L+    K V+CGA HT  + + G++F WG N  GQLG
Sbjct: 94  DYGQLG----HERGRKRLQLILGLDAFVFKKVACGAYHTIAVNEWGQLFSWGSNSEGQLG 149

Query: 440 LGDVIDRNI----PSQV-TIEGCVPRNVACGWWHTLLLA 473
           L     +N     P  V T+   +   VACG  H L L 
Sbjct: 150 LN---SKNFMECSPRMVKTLGTSIIVQVACGMKHALALT 185



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 57/102 (55%), Gaps = 5/102 (4%)

Query: 371 GDVYAFGGNQFGQLGTGG--DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVF 428
           GD++ +G  + G+LG GG  D+   +P  +D      +  + ++CG  +T VI  DGK++
Sbjct: 31  GDMFCWGNTRHGELGLGGIEDEIILVPCQVDFKKASEI--QQIACGENYTVVITHDGKIY 88

Query: 429 CWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTL 470
             G N YGQLG  +   + +   + ++  V + VACG +HT+
Sbjct: 89  SCGNNDYGQLG-HERGRKRLQLILGLDAFVFKKVACGAYHTI 129


>gi|380793883|gb|AFE68817.1| RCC1 domain-containing protein 1, partial [Macaca mulatta]
          Length = 339

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 116/246 (47%), Gaps = 45/246 (18%)

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRV--PGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
           E+  G+      +R  V+   P +R   P    + +  G  H+ ++  AG + ++G G +
Sbjct: 91  EAQIGRLPLLPCARAYVSPRPPFYRPLDPALRARQLELGAEHALLLDAAGQVFSWGGGRH 150

Query: 330 GQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLG---- 385
           GQ G G+ + EL P  + +L G+ +  VAAG WH++C+S  GD+Y +G N+ GQL     
Sbjct: 151 GQLGHGTLEAELEPRLLEALQGLTMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTR 210

Query: 386 -------------TGGDQ---------------------AETLPRLLDAPSLENVHSKSV 411
                        TG ++                      +  P LLD P   +  +  V
Sbjct: 211 NLAEDGETVAREATGLNEDGSQVKRTGRVEDGAPAPFIAVQPFPALLDLPLGSD--AVKV 268

Query: 412 SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI---EGCVPRNVACGWWH 468
           SCG+RHTAV+   G+++ WGW KYGQLG  D    + P +V     +    + V CG W+
Sbjct: 269 SCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDWPRRVEYFVDKQLQVKAVTCGPWN 328

Query: 469 TLLLAV 474
           T + AV
Sbjct: 329 TYVYAV 334



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 80/173 (46%), Gaps = 15/173 (8%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P L+    G+ +A VAAGG H++ +S+ G ++ WG+   GQL L +R  +      +   
Sbjct: 164 PRLLEALQGLTMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTR-NLAEDGETVARE 222

Query: 272 ESSYGKDRSAALSRGSVNSEGPG-----------FRVP-GNYVKGIACGGRHSAVITDAG 319
            +   +D S     G V    P              +P G+    ++CG RH+AV+T  G
Sbjct: 223 ATGLNEDGSQVKRTGRVEDGAPAPFIAVQPFPALLDLPLGSDAVKVSCGSRHTAVVTRTG 282

Query: 320 ALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG--IQIEGVAAGLWHTICISSD 370
            L T+GWG YGQ G   T     P  V   +   +Q++ V  G W+T   + +
Sbjct: 283 ELYTWGWGKYGQLGHEDTTSLDWPRRVEYFVDKQLQVKAVTCGPWNTYVYAVE 335



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 87/207 (42%), Gaps = 44/207 (21%)

Query: 53  GCGFAMAISDSRKLITWG--STDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
           G   A+ +  + ++ +WG      LG   + +     + E     T A +  AA GW H 
Sbjct: 129 GAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLTMAEV--AAGGW-HS 185

Query: 111 VAVTEGGEVYTWGWKECVPSGRVFGDLSTGT---GLDKDVFERQSSFLTEQVSPRSQVSR 167
           V V+E G++Y WGW E        G L+  T     D +   R+++ L E     SQV R
Sbjct: 186 VCVSETGDIYIWGWNES-------GQLALPTRNLAEDGETVAREATGLNED---GSQVKR 235

Query: 168 SSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVA 227
           +           G  E+G+    I++                 FP L+ L  G     V+
Sbjct: 236 T-----------GRVEDGAPAPFIAV---------------QPFPALLDLPLGSDAVKVS 269

Query: 228 AGGRHTLALSDIGQVWGWGYGGEGQLG 254
            G RHT  ++  G+++ WG+G  GQLG
Sbjct: 270 CGSRHTAVVTRTGELYTWGWGKYGQLG 296


>gi|379718300|ref|YP_005310431.1| hypothetical protein PM3016_306 [Paenibacillus mucilaginosus 3016]
 gi|378566972|gb|AFC27282.1| hypothetical protein PM3016_306 [Paenibacillus mucilaginosus 3016]
          Length = 1239

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 84/248 (33%), Positives = 125/248 (50%), Gaps = 28/248 (11%)

Query: 226  VAAGGRHTLALSDIGQVWGWGYGGEGQLGLG---SRIRMVSSPHPIPCIESSYGKDRSAA 282
            V+AG  H+LAL   G VW +GY G GQLG G   S+   V        +  + GKD S A
Sbjct: 809  VSAGENHSLALKSDGTVWAFGYNGYGQLGDGTTSSQRTPVQVKDLTGVVAIAAGKDFSLA 868

Query: 283  L-SRGSV------------NSEGPGFRVPGNY-----VKGIACGGRHSAVITDAGALLTF 324
            L S G+V            N       VP        VK IA G  H   +   G++  +
Sbjct: 869  LKSDGTVWSWGQNTYGELGNGTTTRSSVPVQVALLTDVKAIAAGDYHGVALKKDGSVFAW 928

Query: 325  GWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQL 384
            G+   G+ G  ST  + +P   S + GI+  G+AAG +HT+ + SDG V+++G N +GQL
Sbjct: 929  GYNGNGELGNSSTISQSTP-VQSGVTGIK--GIAAGPYHTLALKSDGTVWSWGYNGYGQL 985

Query: 385  GTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVI 444
            G G + + ++P  +  P L ++   S++ G   +    +DG ++ WG N  GQLG G  +
Sbjct: 986  GNGNNTSRSVPAAI--PGLASI--ASIAAGENQSIAYGNDGILYSWGRNANGQLGNGTTV 1041

Query: 445  DRNIPSQV 452
            D N+P +V
Sbjct: 1042 DTNVPHKV 1049



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/273 (30%), Positives = 127/273 (46%), Gaps = 38/273 (13%)

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVAAG--GRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
           ++G+E+ ++ P     +  +    +A    G HT+ +   G VWGWGY G GQLG G+  
Sbjct: 683 TAGNESAASAPVTAVTSAALGAVPLAVSLLGNHTMFIKSDGTVWGWGYNGHGQLGTGT-- 740

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAG 319
                                      S ++  PG  +    +K IA G  H+  +   G
Sbjct: 741 ---------------------------SNSTSVPGKVINLTGMKMIAGGENHTVALRSDG 773

Query: 320 ALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN 379
            L T+G+  YGQ G  ST    SP  VS+L       V+AG  H++ + SDG V+AFG N
Sbjct: 774 TLHTWGYNGYGQLGDDSTTTRYSPVQVSTL--TNWTAVSAGENHSLALKSDGTVWAFGYN 831

Query: 380 QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG 439
            +GQLG G   ++  P  +    L  V   +++ G   +  +  DG V+ WG N YG+LG
Sbjct: 832 GYGQLGDGTTSSQRTP--VQVKDLTGV--VAIAAGKDFSLALKSDGTVWSWGQNTYGELG 887

Query: 440 LGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
            G     ++P QV +   V + +A G +H + L
Sbjct: 888 NGTTTRSSVPVQVALLTDV-KAIAAGDYHGVAL 919



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 125/270 (46%), Gaps = 39/270 (14%)

Query: 203 SGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMV 262
           +G  N ++ P  V    G+++  +A G  HT+AL   G +  WGY G GQLG  S     
Sbjct: 738 TGTSNSTSVPGKVINLTGMKM--IAGGENHTVALRSDGTLHTWGYNGYGQLGDDSTTTRY 795

Query: 263 SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL 322
            SP  +  +                            N+   ++ G  HS  +   G + 
Sbjct: 796 -SPVQVSTLT---------------------------NWT-AVSAGENHSLALKSDGTVW 826

Query: 323 TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFG 382
            FG+  YGQ G G+T  + +P  V  L G+    +AAG   ++ + SDG V+++G N +G
Sbjct: 827 AFGYNGYGQLGDGTTSSQRTPVQVKDLTGVV--AIAAGKDFSLALKSDGTVWSWGQNTYG 884

Query: 383 QLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGD 442
           +LG G     ++P  +    L +V  K+++ G  H   +  DG VF WG+N  G+LG   
Sbjct: 885 ELGNGTTTRSSVP--VQVALLTDV--KAIAAGDYHGVALKKDGSVFAWGYNGNGELGNSS 940

Query: 443 VIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
            I ++ P Q  + G   + +A G +HTL L
Sbjct: 941 TISQSTPVQSGVTGI--KGIAAGPYHTLAL 968



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 87/202 (43%), Gaps = 34/202 (16%)

Query: 203  SGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMV 262
            +G    S+ P  V L   V+   +AAG  H +AL   G V+ WGY G G+LG  S I   
Sbjct: 888  NGTTTRSSVPVQVALLTDVKA--IAAGDYHGVALKKDGSVFAWGYNGNGELGNSSTISQ- 944

Query: 263  SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL 322
            S+P                      V S   G       +KGIA G  H+  +   G + 
Sbjct: 945  STP----------------------VQSGVTG-------IKGIAAGPYHTLALKSDGTVW 975

Query: 323  TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFG 382
            ++G+  YGQ G G+      P  +  L    I  +AAG   +I   +DG +Y++G N  G
Sbjct: 976  SWGYNGYGQLGNGNNTSRSVPAAIPGL--ASIASIAAGENQSIAYGNDGILYSWGRNANG 1033

Query: 383  QLGTGGDQAETLPRLLDAPSLE 404
            QLG G      +P  +  P++ 
Sbjct: 1034 QLGNGTTVDTNVPHKVIGPNIN 1055


>gi|114321834|ref|YP_743517.1| regulator of chromosome condensation, RCC1 [Alkalilimnicola
           ehrlichii MLHE-1]
 gi|114228228|gb|ABI58027.1| regulator of chromosome condensation, RCC1 [Alkalilimnicola
           ehrlichii MLHE-1]
          Length = 821

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 84/268 (31%), Positives = 130/268 (48%), Gaps = 28/268 (10%)

Query: 224 ATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR---------------IRMVSSPHPI 268
           A V+AGG +TLA+ D G +W WG    GQLGLG                 + + +  H  
Sbjct: 176 AAVSAGGAYTLAVKDDGTLWAWGENYFGQLGLGDTDDRHAPEQVGSDSDWVAVSAGRHHT 235

Query: 269 PCIES-----SYGKDRSAALSRG-SVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL 322
             +++     ++G++    L  G + N   P      +   G+  G RHS  + + G L 
Sbjct: 236 LALKADGTLWAWGRNYFGQLGLGGTTNRNAPEQVGSHSDWAGVIGGDRHSLAVREDGTLW 295

Query: 323 TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFG 382
           ++G    GQ G G T +   P  V +        V+AGL HT+ + +DG ++A+GGN FG
Sbjct: 296 SWGQNNVGQLGLGDTVERRRPEQVGN--DSDWATVSAGLLHTLAVKNDGTLWAWGGNGFG 353

Query: 383 QLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGD 442
           QLG G       P  + + +       +++ G R++  + +DG ++ WGWN +G+LGLGD
Sbjct: 354 QLGLGDTDNRDAPVQVGSDN----DWAALNAGQRYSLAVKNDGSLWSWGWNDFGELGLGD 409

Query: 443 VIDRNIPSQVTIEGCVPRNVACGWWHTL 470
             DR+ P QV   G     V  G +HTL
Sbjct: 410 TDDRHAPEQVG-GGMEWAAVTAGMYHTL 436



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 86/250 (34%), Positives = 115/250 (46%), Gaps = 51/250 (20%)

Query: 205 DENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSS 264
           D   +AFP L            AAGG HTLA+   G +W WG    GQLGLG   +   +
Sbjct: 119 DVECTAFPVL------------AAGGVHTLAMKADGTLWAWGQNNVGQLGLGDTEKR-DT 165

Query: 265 PHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTF 324
           P  +       G D   A                      ++ GG ++  + D G L  +
Sbjct: 166 PAQV-------GSDTDWA---------------------AVSAGGAYTLAVKDDGTLWAW 197

Query: 325 GWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQL 384
           G   +GQ G G TDD  +P  V S        V+AG  HT+ + +DG ++A+G N FGQL
Sbjct: 198 GENYFGQLGLGDTDDRHAPEQVGS--DSDWVAVSAGRHHTLALKADGTLWAWGRNYFGQL 255

Query: 385 GTGGDQAETLPRLLDAPSLENVHSK--SVSCGARHTAVIADDGKVFCWGWNKYGQLGLGD 442
           G GG    T  R  +AP     HS    V  G RH+  + +DG ++ WG N  GQLGLGD
Sbjct: 256 GLGG----TTNR--NAPEQVGSHSDWAGVIGGDRHSLAVREDGTLWSWGQNNVGQLGLGD 309

Query: 443 VIDRNIPSQV 452
            ++R  P QV
Sbjct: 310 TVERRRPEQV 319



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 81/249 (32%), Positives = 112/249 (44%), Gaps = 36/249 (14%)

Query: 224 ATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAAL 283
           ATV+AG  +TLA+ D G +W WG    GQLGLG                           
Sbjct: 576 ATVSAGTGYTLAVKDDGTLWAWGRNSHGQLGLGD-------------------------- 609

Query: 284 SRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
              + N + P      N    ++ G RH+  + + G L  +G    GQ G G TD+   P
Sbjct: 610 ---TNNRDAPVQVASDNDWAAVSAGSRHTLAVKNDGTLWAWGRNSDGQLGLGDTDNRDVP 666

Query: 344 NCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSL 403
             V S        V+ G  HT+ + +DG ++A+G N  GQLG G       P  +   S 
Sbjct: 667 EQVGS--DTDWAAVSTGSGHTLAVKTDGTLWAWGRNSDGQLGLGDTDERHAPEQVGGDS- 723

Query: 404 ENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVA 463
                 +V+ G +HT  I +DG ++ WG N YGQLGLGD   R+ P QV  +      VA
Sbjct: 724 ---DWAAVTAGWQHTLAIKNDGTLWGWGLNLYGQLGLGDTDGRHAPMQVGSDSDWA-TVA 779

Query: 464 CGWWHTLLL 472
            G +HTL +
Sbjct: 780 AGRYHTLAV 788



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 122/451 (27%), Positives = 184/451 (40%), Gaps = 84/451 (18%)

Query: 39  PLTVGSA--WRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPT 96
           P  VGS   W  V GG    ++A+ +   L +WG  +++GQ  +  G   E   P  +  
Sbjct: 266 PEQVGSHSDWAGVIGGDR-HSLAVREDGTLWSWGQ-NNVGQ--LGLGDTVERRRPEQVGN 321

Query: 97  EASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLT 156
           ++     +AG  H +AV   G ++ WG       G  FG L  G     D   R +    
Sbjct: 322 DSDWATVSAGLLHTLAVKNDGTLWAWG-------GNGFGQLGLG-----DTDNRDAPV-- 367

Query: 157 EQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSS-----------GD 205
            QV   +  +  + G                 +R SLA +   S  S           GD
Sbjct: 368 -QVGSDNDWAALNAG-----------------QRYSLAVKNDGSLWSWGWNDFGELGLGD 409

Query: 206 ENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSP 265
            +    P  V    G+  A V AG  HTL +   G +  WG    G+LGLG  + + S  
Sbjct: 410 TDDRHAPEQV--GGGMEWAAVTAGMYHTLGVKADGTLRAWGRNDFGELGLGVMVYITS-- 465

Query: 266 HPIPCIESS-----------------------YGKDRSAALSRGSVNSEGPGFRVPGNY- 301
            P+  +  +                       +G++ S  L  G  +      +V G+  
Sbjct: 466 -PLQTVTEADWAAASAGQYQTQAVKADGSLWGWGRNHSGQLGLGDTDDRHAPVQVGGDSD 524

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
              ++ G  H+  +   G L  +G    GQ G G TDD  +P  V S        V+AG 
Sbjct: 525 WTSLSVGREHTLAVKADGTLWGWGQNYNGQLGLGDTDDRKTPERVGS--DSDWATVSAGT 582

Query: 362 WHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
            +T+ +  DG ++A+G N  GQLG G    +T  R        +    +VS G+RHT  +
Sbjct: 583 GYTLAVKDDGTLWAWGRNSHGQLGLG----DTNNRDAPVQVASDNDWAAVSAGSRHTLAV 638

Query: 422 ADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
            +DG ++ WG N  GQLGLGD  +R++P QV
Sbjct: 639 KNDGTLWAWGRNSDGQLGLGDTDNRDVPEQV 669



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 72/236 (30%), Positives = 101/236 (42%), Gaps = 37/236 (15%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
           GD N    P  V  +     A V+AG RHTLA+ + G +W WG   +GQLGLG      +
Sbjct: 608 GDTNNRDAPVQVASDN--DWAAVSAGSRHTLAVKNDGTLWAWGRNSDGQLGLGD-----T 660

Query: 264 SPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLT 323
               +P      G D   A                      ++ G  H+  +   G L  
Sbjct: 661 DNRDVP---EQVGSDTDWA---------------------AVSTGSGHTLAVKTDGTLWA 696

Query: 324 FGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQ 383
           +G    GQ G G TD+  +P  V          V AG  HT+ I +DG ++ +G N +GQ
Sbjct: 697 WGRNSDGQLGLGDTDERHAPEQVGG--DSDWAAVTAGWQHTLAIKNDGTLWGWGLNLYGQ 754

Query: 384 LGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG 439
           LG G       P  + + S       +V+ G  HT  + DDG +  WG N++GQLG
Sbjct: 755 LGLGDTDGRHAPMQVGSDS----DWATVAAGRYHTLAVKDDGTLRAWGRNRFGQLG 806



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 47/121 (38%), Positives = 65/121 (53%), Gaps = 5/121 (4%)

Query: 357 VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR 416
           +AAG  HT+ + +DG ++A+G N  GQLG G    +T  R   A    +    +VS G  
Sbjct: 128 LAAGGVHTLAMKADGTLWAWGQNNVGQLGLG----DTEKRDTPAQVGSDTDWAAVSAGGA 183

Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAVPP 476
           +T  + DDG ++ WG N +GQLGLGD  DR+ P QV  +      V+ G  HTL L    
Sbjct: 184 YTLAVKDDGTLWAWGENYFGQLGLGDTDDRHAPEQVGSDSDWVA-VSAGRHHTLALKADG 242

Query: 477 T 477
           T
Sbjct: 243 T 243



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 76/301 (25%), Positives = 110/301 (36%), Gaps = 60/301 (19%)

Query: 37  RLPLTVGSA--WRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPL 94
           + P  VGS   W  V  G  G+ +A+ D   L  WG         +  G       P  +
Sbjct: 564 KTPERVGSDSDWATVSAG-TGYTLAVKDDGTLWAWGRN---SHGQLGLGDTNNRDAPVQV 619

Query: 95  PTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSF 154
            ++      +AG  H +AV   G ++ WG           G L  G   ++DV E+  S 
Sbjct: 620 ASDNDWAAVSAGSRHTLAVKNDGTLWAWGRNSD-------GQLGLGDTDNRDVPEQVGSD 672

Query: 155 LTEQVSPRSQVSRSSGGT-SSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPC 213
                +  + VS  SG T +  TDG             +  + +      GD +    P 
Sbjct: 673 -----TDWAAVSTGSGHTLAVKTDGT----------LWAWGRNSDGQLGLGDTDERHAPE 717

Query: 214 LVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES 273
            V  +     A V AG +HTLA+ + G +WGWG    GQLGLG                 
Sbjct: 718 QVGGDS--DWAAVTAGWQHTLAIKNDGTLWGWGLNLYGQLGLGDT--------------- 760

Query: 274 SYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCG 333
                R A +  GS +               +A G  H+  + D G L  +G   +GQ G
Sbjct: 761 ---DGRHAPMQVGSDSDWAT-----------VAAGRYHTLAVKDDGTLRAWGRNRFGQLG 806

Query: 334 Q 334
           Q
Sbjct: 807 Q 807


>gi|449522972|ref|XP_004168499.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Cucumis
           sativus]
          Length = 806

 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 64/171 (37%), Positives = 96/171 (56%), Gaps = 4/171 (2%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V GIACGGRH+ ++T  G + ++G    G+ G G   D   P  + +L G  +E VA G 
Sbjct: 292 VHGIACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEADVSHPKIIDTLSGTNVELVACGE 351

Query: 362 WHTICISSDGDVYAFGG--NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
           +HT  ++  GD+Y +G   + +G LG G + +  +P+ +    +E +    +SCGA HTA
Sbjct: 352 YHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVSG-QMEGIRVSYISCGAWHTA 410

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
           V+   G++F +G   +G LG GD I  N P +V T+ G     VACG WHT
Sbjct: 411 VVTSAGQLFTFGDGSFGALGHGDHITSNFPREVETLRGLRTTKVACGVWHT 461



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/271 (29%), Positives = 128/271 (47%), Gaps = 45/271 (16%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G+R++ ++ G  HT  ++  GQ++ +G G  G LG G  I   +S  P           R
Sbjct: 396 GIRVSYISCGAWHTAVVTSAGQLFTFGDGSFGALGHGDHI---TSNFP-----------R 441

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAV-------ITDAGA--------LLTF 324
                RG   ++             +ACG  H+A        ++D+G         L T+
Sbjct: 442 EVETLRGLRTTK-------------VACGVWHTAAAVEAINELSDSGTSASPSSRKLYTW 488

Query: 325 GWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQL 384
           G G  G+ G G  +  L P CV++L+  +I  VA G   T+ +++ G VY  G   +GQL
Sbjct: 489 GDGDKGRLGHGDNEPRLVPECVAALMEERICQVACGNDLTVALTTAGRVYTMGSTAYGQL 548

Query: 385 GTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVI 444
           G+     + LP  ++   + N   + V+CG+ H AV+    +V+ WG    GQLG GD  
Sbjct: 549 GSATANGK-LPTCVEG-EIANSFVEEVACGSYHVAVLTSKNEVYTWGKGLNGQLGHGDNN 606

Query: 445 DRNIPSQV-TIEGCVPRNVACGWWHTLLLAV 474
            RN P+ V  ++    +NVACG   T+++ +
Sbjct: 607 HRNTPTIVDVLKDKQVKNVACGSKFTVVICI 637



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 103/397 (25%), Positives = 165/397 (41%), Gaps = 75/397 (18%)

Query: 48  DVCGGGCGFAMAISDSRK--LITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKA 103
           DV G  CG   A+  +R+  + +WG      LG        H +I +     +  ++   
Sbjct: 291 DVHGIACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEADVSHPKIIDTL---SGTNVELV 347

Query: 104 AAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRS 163
           A G  H  AVT  G++YTWG          +G L  G+ +        S ++ ++VS + 
Sbjct: 348 ACGEYHTCAVTLSGDLYTWG-----DGTHNYGLLGHGSEV--------SHWIPQKVSGQM 394

Query: 164 Q---VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPG 220
           +   VS  S G         +G+        +    +  +   GD   S FP  V    G
Sbjct: 395 EGIRVSYISCGAWHTAVVTSAGQ------LFTFGDGSFGALGHGDHITSNFPREVETLRG 448

Query: 221 VRIATVAAGGRHTLA-------LSDIG--------QVWGWGYGGEGQLGLGSRIRMVSSP 265
           +R   VA G  HT A       LSD G        +++ WG G +G+LG G      + P
Sbjct: 449 LRTTKVACGVWHTAAAVEAINELSDSGTSASPSSRKLYTWGDGDKGRLGHGD-----NEP 503

Query: 266 HPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFG 325
             +P   ++  ++R                      +  +ACG   +  +T AG + T G
Sbjct: 504 RLVPECVAALMEER----------------------ICQVACGNDLTVALTTAGRVYTMG 541

Query: 326 WGLYGQCGQGSTDDELSPNCVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQL 384
              YGQ G  + + +L P CV   +    +E VA G +H   ++S  +VY +G    GQL
Sbjct: 542 STAYGQLGSATANGKL-PTCVEGEIANSFVEEVACGSYHVAVLTSKNEVYTWGKGLNGQL 600

Query: 385 GTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
           G G +     P ++D   L++   K+V+CG++ T VI
Sbjct: 601 GHGDNNHRNTPTIVDV--LKDKQVKNVACGSKFTVVI 635


>gi|402914058|ref|XP_003919452.1| PREDICTED: RCC1 domain-containing protein 1 isoform 1 [Papio
           anubis]
 gi|402914060|ref|XP_003919453.1| PREDICTED: RCC1 domain-containing protein 1 isoform 2 [Papio
           anubis]
          Length = 376

 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 117/249 (46%), Gaps = 45/249 (18%)

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFR--VPGNYVKGIACGGRHSAVITDAGALLTFGW 326
           P  E+  G+      +R  V+   P +R   P    + +  G  H+ ++  AG + ++G 
Sbjct: 125 PDGEAQTGRLPLLPCARAYVSPRPPFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGG 184

Query: 327 GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLG- 385
           G +GQ G G+ + EL P  + +L G+ +  VAAG WH++C+S  GD+Y +G N+ GQL  
Sbjct: 185 GRHGQLGHGTLEAELEPRLLEALQGLTMAEVAAGGWHSVCVSETGDIYIWGWNESGQLAL 244

Query: 386 ----------------TGGDQ---------------------AETLPRLLDAPSLENVHS 408
                           TG ++                      +  P LLD P   +  +
Sbjct: 245 PTRNLAEDGETVAREATGLNEDGSQVKRTGRVEDGAPAPFIAVQPFPALLDLPLGSD--A 302

Query: 409 KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI---EGCVPRNVACG 465
             VSCG+RHTAV+   G+++ WGW KYGQLG  D    + P +V     +    + V CG
Sbjct: 303 VKVSCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDWPRRVEYFVDKQLQVKAVTCG 362

Query: 466 WWHTLLLAV 474
            W+T + AV
Sbjct: 363 PWNTYVYAV 371



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 80/173 (46%), Gaps = 15/173 (8%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P L+    G+ +A VAAGG H++ +S+ G ++ WG+   GQL L +R  +      +   
Sbjct: 201 PRLLEALQGLTMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTR-NLAEDGETVARE 259

Query: 272 ESSYGKDRSAALSRGSVNSEGPG-----------FRVP-GNYVKGIACGGRHSAVITDAG 319
            +   +D S     G V    P              +P G+    ++CG RH+AV+T  G
Sbjct: 260 ATGLNEDGSQVKRTGRVEDGAPAPFIAVQPFPALLDLPLGSDAVKVSCGSRHTAVVTRTG 319

Query: 320 ALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG--IQIEGVAAGLWHTICISSD 370
            L T+GWG YGQ G   T     P  V   +   +Q++ V  G W+T   + +
Sbjct: 320 ELYTWGWGKYGQLGHEDTTSLDWPRRVEYFVDKQLQVKAVTCGPWNTYVYAVE 372



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 87/207 (42%), Gaps = 44/207 (21%)

Query: 53  GCGFAMAISDSRKLITWG--STDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
           G   A+ +  + ++ +WG      LG   + +     + E     T A +  AA GW H 
Sbjct: 166 GAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLTMAEV--AAGGW-HS 222

Query: 111 VAVTEGGEVYTWGWKECVPSGRVFGDLSTGT---GLDKDVFERQSSFLTEQVSPRSQVSR 167
           V V+E G++Y WGW E        G L+  T     D +   R+++ L E     SQV R
Sbjct: 223 VCVSETGDIYIWGWNES-------GQLALPTRNLAEDGETVAREATGLNED---GSQVKR 272

Query: 168 SSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVA 227
           +           G  E+G+    I++                 FP L+ L  G     V+
Sbjct: 273 T-----------GRVEDGAPAPFIAV---------------QPFPALLDLPLGSDAVKVS 306

Query: 228 AGGRHTLALSDIGQVWGWGYGGEGQLG 254
            G RHT  ++  G+++ WG+G  GQLG
Sbjct: 307 CGSRHTAVVTRTGELYTWGWGKYGQLG 333


>gi|337744685|ref|YP_004638847.1| hypothetical protein KNP414_00352 [Paenibacillus mucilaginosus
            KNP414]
 gi|336295874|gb|AEI38977.1| hypothetical protein KNP414_00352 [Paenibacillus mucilaginosus
            KNP414]
          Length = 1224

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 84/248 (33%), Positives = 126/248 (50%), Gaps = 28/248 (11%)

Query: 226  VAAGGRHTLALSDIGQVWGWGYGGEGQLGLG---SRIRMVSSPHPIPCIESSYGKDRSAA 282
            V+AG  H+LAL   G VW +GY G GQLG G   S+   V        +  + GKD S A
Sbjct: 794  VSAGENHSLALKSDGTVWAFGYNGYGQLGDGTTSSQRTPVQVKDLTGVVAIAAGKDFSLA 853

Query: 283  L-SRGSV------------NSEGPGFRVPGNY-----VKGIACGGRHSAVITDAGALLTF 324
            L S G+V            N       VP        VK IA G  H   +   G++  +
Sbjct: 854  LKSDGTVWSWGQNTYGELGNGTTTRSSVPVQVALLTDVKAIAAGDYHGVALKKDGSVFAW 913

Query: 325  GWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQL 384
            G+   G+ G  ST  + +P   S + GI+  G+AAG +HT+ + SDG V+++G N +GQL
Sbjct: 914  GYNGNGELGNSSTISQSTP-VQSGVTGIK--GIAAGPYHTLALKSDGTVWSWGYNGYGQL 970

Query: 385  GTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVI 444
            G+G + + ++P  +  P L ++   S++ G   +    +DG ++ WG N  GQLG G  +
Sbjct: 971  GSGNNTSRSVPAAI--PGLASM--ASIAAGENQSIAYGNDGILYSWGRNANGQLGNGTTV 1026

Query: 445  DRNIPSQV 452
            D N+P +V
Sbjct: 1027 DTNVPHKV 1034



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/273 (30%), Positives = 127/273 (46%), Gaps = 38/273 (13%)

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVAAG--GRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
           ++G+E+ ++ P     +  +    +A    G HT+ +   G VWGWGY G GQLG G+  
Sbjct: 668 TAGNESAASAPVTAVTSAALGAVPLAVSLLGNHTMFIKSDGTVWGWGYNGHGQLGTGT-- 725

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAG 319
                                      S ++  PG  +    +K IA G  H+  +   G
Sbjct: 726 ---------------------------SNSTSVPGKVINLTGMKMIAGGENHTVALRSDG 758

Query: 320 ALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN 379
            L T+G+  YGQ G  ST    SP  VS+L       V+AG  H++ + SDG V+AFG N
Sbjct: 759 TLHTWGYNGYGQLGDDSTTTRYSPVQVSTL--TNWTAVSAGENHSLALKSDGTVWAFGYN 816

Query: 380 QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG 439
            +GQLG G   ++  P  +    L  V   +++ G   +  +  DG V+ WG N YG+LG
Sbjct: 817 GYGQLGDGTTSSQRTP--VQVKDLTGV--VAIAAGKDFSLALKSDGTVWSWGQNTYGELG 872

Query: 440 LGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
            G     ++P QV +   V + +A G +H + L
Sbjct: 873 NGTTTRSSVPVQVALLTDV-KAIAAGDYHGVAL 904



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 125/270 (46%), Gaps = 39/270 (14%)

Query: 203 SGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMV 262
           +G  N ++ P  V    G+++  +A G  HT+AL   G +  WGY G GQLG  S     
Sbjct: 723 TGTSNSTSVPGKVINLTGMKM--IAGGENHTVALRSDGTLHTWGYNGYGQLGDDSTTTRY 780

Query: 263 SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL 322
            SP  +  +                            N+   ++ G  HS  +   G + 
Sbjct: 781 -SPVQVSTLT---------------------------NWT-AVSAGENHSLALKSDGTVW 811

Query: 323 TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFG 382
            FG+  YGQ G G+T  + +P  V  L G+    +AAG   ++ + SDG V+++G N +G
Sbjct: 812 AFGYNGYGQLGDGTTSSQRTPVQVKDLTGVV--AIAAGKDFSLALKSDGTVWSWGQNTYG 869

Query: 383 QLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGD 442
           +LG G     ++P  +    L +V  K+++ G  H   +  DG VF WG+N  G+LG   
Sbjct: 870 ELGNGTTTRSSVP--VQVALLTDV--KAIAAGDYHGVALKKDGSVFAWGYNGNGELGNSS 925

Query: 443 VIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
            I ++ P Q  + G   + +A G +HTL L
Sbjct: 926 TISQSTPVQSGVTGI--KGIAAGPYHTLAL 953



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 87/202 (43%), Gaps = 34/202 (16%)

Query: 203  SGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMV 262
            +G    S+ P  V L   V+   +AAG  H +AL   G V+ WGY G G+LG  S I   
Sbjct: 873  NGTTTRSSVPVQVALLTDVKA--IAAGDYHGVALKKDGSVFAWGYNGNGELGNSSTISQ- 929

Query: 263  SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL 322
            S+P                      V S   G       +KGIA G  H+  +   G + 
Sbjct: 930  STP----------------------VQSGVTG-------IKGIAAGPYHTLALKSDGTVW 960

Query: 323  TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFG 382
            ++G+  YGQ G G+      P  +  L    +  +AAG   +I   +DG +Y++G N  G
Sbjct: 961  SWGYNGYGQLGSGNNTSRSVPAAIPGL--ASMASIAAGENQSIAYGNDGILYSWGRNANG 1018

Query: 383  QLGTGGDQAETLPRLLDAPSLE 404
            QLG G      +P  +  P++ 
Sbjct: 1019 QLGNGTTVDTNVPHKVIGPNIN 1040


>gi|395527072|ref|XP_003765675.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Sarcophilus
            harrisii]
          Length = 4483

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 123/251 (49%), Gaps = 32/251 (12%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            ++   V +GG+H LALS  G+V+ WG   +G+LG G+R          PC       DR 
Sbjct: 3793 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR---------SPC-------DRP 3836

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
              +             + G  V  IA GG HSA IT AG L T+G G YG+ G G ++D+
Sbjct: 3837 RVIE-----------SLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGRLGHGDSEDQ 3885

Query: 341  LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V +L G ++  +A  +G   T+C++ D  V+++G   +G+LG GG     +P  +
Sbjct: 3886 LKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKI 3945

Query: 399  DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGC 457
            D  SL  +    V CG++ +  +   G V+ WG   Y +LG G       P QV  ++G 
Sbjct: 3946 D--SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGK 4003

Query: 458  VPRNVACGWWH 468
                +A G  H
Sbjct: 4004 KVIAIATGSLH 4014



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 130/306 (42%), Gaps = 80/306 (26%)

Query: 218  NPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
            N  V+   V +GGRH +AL+  G+++ WG G +G+LG  SR+     P  I  +++   +
Sbjct: 2796 NYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIR 2854

Query: 278  DRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST 337
            D                          IACG  HSA IT +G L T+G G YG+ G G  
Sbjct: 2855 D--------------------------IACGSSHSAAITSSGELYTWGLGEYGRLGHGDN 2888

Query: 338  DDELSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLP 395
              +L P  V  LLG ++  VA G     T+ ++ +G V+++G   FG+LG GG +   +P
Sbjct: 2889 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIP 2948

Query: 396  RLLDAPSLE------------------------------------NVHSKS--------- 410
            + ++  + +                                    +VH +          
Sbjct: 2949 QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRG 3008

Query: 411  -----VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVAC 464
                 V+ GA H   + D G+V+ WG N +GQ G G       P+ V  +EG     VAC
Sbjct: 3009 KKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVAC 3068

Query: 465  GWWHTL 470
            G  H++
Sbjct: 3069 GSSHSV 3074



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 114/263 (43%), Gaps = 45/263 (17%)

Query: 220  GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS-----RIRMVSSPHPIPCIESS 274
            G+ +  +AAGG H+  ++  G ++ WG G  G+LG G      + ++V +      I+ +
Sbjct: 3844 GIEVVDIAAGGAHSACITAAGDLYTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIA 3903

Query: 275  YGKDRSAALSRGSVNSE---------------GPGFRVPGNY-------VKGIACGGRHS 312
             G   +  L     ++                  G +VP          V  + CG + S
Sbjct: 3904 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFS 3963

Query: 313  AVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGD 372
              +T +GA+ T+G G Y + G GS D    P  V  L G ++  +A G  H +C + DG+
Sbjct: 3964 VALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4023

Query: 373  VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGW 432
            VY +G N  GQLG G   A   PRL+ A  L+      V+CG+ HT           W  
Sbjct: 4024 VYTWGDNDEGQLGDGTTNAIQRPRLVAA--LQGKKINRVACGSAHT---------LAWST 4072

Query: 433  NKYGQLGLGDVIDRNIPSQVTIE 455
            +K    G        +P+QV +E
Sbjct: 4073 SKPANAG-------KLPTQVPME 4088



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 72/278 (25%), Positives = 128/278 (46%), Gaps = 54/278 (19%)

Query: 225  TVAAGGRHTLALSDIGQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAA 282
            T++AGG         G ++GWG+   GQLG   G+++++     P PC   +    R   
Sbjct: 3699 TLSAGGS--------GTIYGWGHNHRGQLGGIEGAKVKV-----PTPC--EALAALRPIQ 3743

Query: 283  LSRG-----SVNSEGPGF-------------------------RVPGNYVKGIAC--GGR 310
            L  G     +V ++G  +                          +   ++K +A   GG+
Sbjct: 3744 LIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGK 3803

Query: 311  HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
            H   ++  G + ++G    G+ G G+      P  + SL GI++  +AAG  H+ CI++ 
Sbjct: 3804 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAA 3863

Query: 371  GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGA--RHTAVIADDGKVF 428
            GD+Y +G  ++G+LG G  + +  P+L++A  L+      ++CG+    T  + DD  V+
Sbjct: 3864 GDLYTWGKGRYGRLGHGDSEDQLKPKLVEA--LQGYRVIDIACGSGDAQTLCLTDDDTVW 3921

Query: 429  CWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
             WG   YG+LG G      +P ++ ++ G     V CG
Sbjct: 3922 SWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECG 3959



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 108/399 (27%), Positives = 164/399 (41%), Gaps = 60/399 (15%)

Query: 55   GFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVT 114
            G   A +   K+  WG  +D  Q     G   ++P      +  ++V+ A G     AVT
Sbjct: 2702 GLESAATIRTKVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT 2760

Query: 115  EGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSS 174
              G+VY  G      +GR+   +S+GT        RQ + L+  V  +  V+  SGG  +
Sbjct: 2761 VEGKVYACGE---ATNGRLGLGISSGTV----PIPRQITALSNYVVKK--VAVHSGGRHA 2811

Query: 175  ---GTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVA 227
                 DG+    G G++G         K    S  + D+     P L+      RI  +A
Sbjct: 2812 MALTVDGKIFSWGEGDDG---------KLGHFSRMNCDK-----PRLIEALKTKRIRDIA 2857

Query: 228  AGGRHTLALSDIGQVWGWGYGGEGQLGLGS-----RIRMVSSPHPIPCIESSYGKDRSAA 282
             G  H+ A++  G+++ WG G  G+LG G      + +MV        I+ + G   +  
Sbjct: 2858 CGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 2917

Query: 283  LS---RGSVNSEGPG-------------------FRVPGNYVKGIACGGRHSAVITDAGA 320
            L+    G V S G G                    R+ G  V  I CG + S  +T +G 
Sbjct: 2918 LALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGV 2977

Query: 321  LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
            + T+G G Y + G G+      P  V  L G +I  VA G  H + ++  G VYA+G N 
Sbjct: 2978 VWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDND 3037

Query: 381  FGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
             GQ G G       P L+    LE      V+CG+ H+ 
Sbjct: 3038 HGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 3074



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 121/276 (43%), Gaps = 48/276 (17%)

Query: 205  DENLSAFPCLVT---------LNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG- 254
            DE+L+A P L +          N G  I   A+G      +    +V+ WG   + QLG 
Sbjct: 2669 DEDLAAVPFLASDNEEEDDEKANTGSLIRKKASGLESAATIR--TKVFVWGLNDKDQLGG 2726

Query: 255  -LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSA 313
              GS+I++            S+ +  SA                  N V+ +A G +   
Sbjct: 2727 LKGSKIKV-----------PSFSETLSAL-----------------NVVQ-VAGGSKSLF 2757

Query: 314  VITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVA--AGLWHTICISSD 370
             +T  G +   G    G+ G G +   +  P  +++L    ++ VA  +G  H + ++ D
Sbjct: 2758 AVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVD 2817

Query: 371  GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
            G ++++G    G+LG         PRL++A  L+    + ++CG+ H+A I   G+++ W
Sbjct: 2818 GKIFSWGEGDDGKLGHFSRMNCDKPRLIEA--LKTKRIRDIACGSSHSAAITSSGELYTW 2875

Query: 431  GWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACG 465
            G  +YG+LG GD   +  P  V +  G     VACG
Sbjct: 2876 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 2911



 Score = 43.9 bits (102), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 2/71 (2%)

Query: 371 GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
           G V+++G   +G+LG GG      P+L++   L+++    V CG++ +  +  DG+V+ W
Sbjct: 409 GQVWSWGDGDYGKLGRGGSDGCKTPKLIE--KLQDLDVVKVRCGSQFSVALTKDGQVYSW 466

Query: 431 GWNKYGQLGLG 441
           G     +LG G
Sbjct: 467 GKGDNQRLGHG 477



 Score = 43.1 bits (100), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 23/81 (28%), Positives = 44/81 (54%)

Query: 319 GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           G + ++G G YG+ G+G +D   +P  +  L  + +  V  G   ++ ++ DG VY++G 
Sbjct: 409 GQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGK 468

Query: 379 NQFGQLGTGGDQAETLPRLLD 399
               +LG G ++    P+LL+
Sbjct: 469 GDNQRLGHGTEEHVRYPKLLE 489



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 5/73 (6%)

Query: 53   GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
            G  F++A++ S  + TWG  D   LG     S  H   P          ++  A G  HC
Sbjct: 3959 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRRPRQVQGLQGKKVIAIATGSLHC 4015

Query: 111  VAVTEGGEVYTWG 123
            V  TE GEVYTWG
Sbjct: 4016 VCCTEDGEVYTWG 4028


>gi|328715082|ref|XP_001946768.2| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Acyrthosiphon
            pisum]
          Length = 4404

 Score =  112 bits (281), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 93/317 (29%), Positives = 138/317 (43%), Gaps = 84/317 (26%)

Query: 212  PCLVT-LNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPC 270
            P LV  LN  +++A V +GGRH LALS  G+V+ WG G +G+LGLG+R+      H  P 
Sbjct: 3624 PQLVQGLNNIIKVA-VNSGGRHCLALSTTGEVYAWGDGDDGKLGLGNRV-----THSKPQ 3677

Query: 271  IESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
            +  S                      +    +  IACGG HSA I+  G L T+G G YG
Sbjct: 3678 LVQS----------------------LSDKCIIDIACGGFHSAAISRYGHLYTWGKGRYG 3715

Query: 331  QCGQGSTDDELSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGG 388
            + G G  +D L P  V  L+   +  VA  +G   T+C++SD +V+++G   +G+LG   
Sbjct: 3716 RLGHGDYEDYLYPKLVQGLINYHVVKVACGSGDAQTMCVTSDDNVWSWGDGDYGKLGHNI 3775

Query: 389  DQAETLPRLLDAPSLENV-------------------------------HSKS------- 410
             ++  LP  +++ S + +                               H  S       
Sbjct: 3776 SESCKLPCKIESLSGKGIIQIDCGSQFSVALSANGTLYTWGKGDYFRLGHGSSEHVRKPK 3835

Query: 411  ------------VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDV--IDRNIPSQVTIEG 456
                         S G+ H   + DDG+V+ WG N  GQLG G    I R  P    ++G
Sbjct: 3836 PVSGLQGKKIVQFSTGSLHVLALTDDGEVYAWGDNDEGQLGDGTAHPIARPRPI-AALKG 3894

Query: 457  CVPRNVACGWWHTLLLA 473
               + V+CG  H+   A
Sbjct: 3895 KRIQQVSCGSAHSFAWA 3911



 Score =  107 bits (267), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 72/223 (32%), Positives = 106/223 (47%), Gaps = 31/223 (13%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            ++   V +GG+H +ALS  G+V  WG G +G+LG G  I  + +P     I+S   K   
Sbjct: 2680 IKTVAVHSGGKHAMALSLDGKVLSWGDGEDGKLGHGD-ILTLDTPK---LIDSLLAKR-- 2733

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                 V  IACG  HSA IT  G L T+G G YG+ G      +
Sbjct: 2734 ---------------------VFYIACGSAHSAAITSDGELYTWGQGQYGRLGHSDEVSQ 2772

Query: 341  LSPNCVSSLLGIQIEGVAAGL--WHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
             +P  V   +G  I  VA G     T+ + S+G+VY++G   FG+LG GG      P+ +
Sbjct: 2773 HTPKLVKEFVGKNITQVACGSRDAQTLALDSEGNVYSWGDGDFGKLGRGGSDGCCTPQKV 2832

Query: 399  DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
            +   L       + CGA+ +  +   G+V+ WG  +Y +LGLG
Sbjct: 2833 E--RLVGHRVVQIECGAQFSVALTATGQVWTWGKGEYYRLGLG 2873



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 95/332 (28%), Positives = 140/332 (42%), Gaps = 56/332 (16%)

Query: 99   SIVKAA--AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLT 156
            +I+K A  +G  HC+A++  GEVY WG  +    G++        GL   V   +   L 
Sbjct: 3632 NIIKVAVNSGGRHCLALSTTGEVYAWGDGD---DGKL--------GLGNRVTHSKPQ-LV 3679

Query: 157  EQVSPRSQVSRSSGGTSSGTDGR-GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLV 215
            + +S +  +  + GG  S    R G      K R   L          GD     +P LV
Sbjct: 3680 QSLSDKCIIDIACGGFHSAAISRYGHLYTWGKGRYGRLGH--------GDYEDYLYPKLV 3731

Query: 216  T--LNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPC-IE 272
               +N  V      +G   T+ ++    VW WG G  G+LG       +S    +PC IE
Sbjct: 3732 QGLINYHVVKVACGSGDAQTMCVTSDDNVWSWGDGDYGKLG-----HNISESCKLPCKIE 3786

Query: 273  SSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQC 332
            S  GK                        +  I CG + S  ++  G L T+G G Y + 
Sbjct: 3787 SLSGKG-----------------------IIQIDCGSQFSVALSANGTLYTWGKGDYFRL 3823

Query: 333  GQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAE 392
            G GS++    P  VS L G +I   + G  H + ++ DG+VYA+G N  GQLG G     
Sbjct: 3824 GHGSSEHVRKPKPVSGLQGKKIVQFSTGSLHVLALTDDGEVYAWGDNDEGQLGDGTAHPI 3883

Query: 393  TLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
              PR + A  L+    + VSCG+ H+   A +
Sbjct: 3884 ARPRPIAA--LKGKRIQQVSCGSAHSFAWASE 3913



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 96/343 (27%), Positives = 142/343 (41%), Gaps = 62/343 (18%)

Query: 86   GEIPEPFPLPTEAS-IVKAAA---GWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGT 141
            G++  P  +P  +  ++K  A   G  H +A++  G+V +WG  E        G L  G 
Sbjct: 2664 GKVSSPRQIPGLSQFVIKTVAVHSGGKHAMALSLDGKVLSWGDGED-------GKLGHGD 2716

Query: 142  GLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQT 197
             L  D  +   S L ++V   +  S  S   +S  DG     G G+ G    R+  + + 
Sbjct: 2717 ILTLDTPKLIDSLLAKRVFYIACGSAHSAAITS--DGELYTWGQGQYG----RLGHSDEV 2770

Query: 198  AESSSSGDENLSAFPCLVTLNPGVRIATVAAGGR--HTLALSDIGQVWGWGYGGEGQLGL 255
            ++ +          P LV    G  I  VA G R   TLAL   G V+ WG G  G+LG 
Sbjct: 2771 SQHT----------PKLVKEFVGKNITQVACGSRDAQTLALDSEGNVYSWGDGDFGKLGR 2820

Query: 256  GSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVI 315
            G                   G D      +          R+ G+ V  I CG + S  +
Sbjct: 2821 G-------------------GSDGCCTPQKVE--------RLVGHRVVQIECGAQFSVAL 2853

Query: 316  TDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYA 375
            T  G + T+G G Y + G G  +    P  V+ L  + I+ +A G  H I +S+ GDVY 
Sbjct: 2854 TATGQVWTWGKGEYYRLGLGRGEHVRRPTLVNQLKLVTIDHIAVGTLHCIAVSTQGDVYC 2913

Query: 376  FGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
            +G N  GQ G G   A   PRL+   +  N+    V CG+  +
Sbjct: 2914 WGDNDHGQQGNGTTNANQEPRLVT--NFNNIKINRVGCGSSQS 2954



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 62/221 (28%), Positives = 99/221 (44%), Gaps = 34/221 (15%)

Query: 225  TVAAGGRHTL-ALSDIGQVWGWGYGGEGQLGLGS---RIRMVSSPHPIPCIESSYGKDRS 280
            T   GG  T+ A++  G+V+  GY   G+LG+G    +   V +P  +  + +       
Sbjct: 3580 TQVIGGEQTMFAVTSYGKVYASGYTESGRLGIGPYNPKNPYVVTPQLVQGLNN------- 3632

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
              + + +VNS                 GGRH   ++  G +  +G G  G+ G G+    
Sbjct: 3633 --IIKVAVNS-----------------GGRHCLALSTTGEVYAWGDGDDGKLGLGNRVTH 3673

Query: 341  LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
              P  V SL    I  +A G +H+  IS  G +Y +G  ++G+LG G  +    P+L+  
Sbjct: 3674 SKPQLVQSLSDKCIIDIACGGFHSAAISRYGHLYTWGKGRYGRLGHGDYEDYLYPKLVQG 3733

Query: 401  PSLENVHSKSVSCGA--RHTAVIADDGKVFCWGWNKYGQLG 439
              L N H   V+CG+    T  +  D  V+ WG   YG+LG
Sbjct: 3734 --LINYHVVKVACGSGDAQTMCVTSDDNVWSWGDGDYGKLG 3772



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 85/352 (24%), Positives = 140/352 (39%), Gaps = 76/352 (21%)

Query: 25   PQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGK 84
            P++ P LS  V++   TV      V  GG   AMA+S   K+++WG  +D        GK
Sbjct: 2669 PRQIPGLSQFVIK---TVA-----VHSGG-KHAMALSLDGKVLSWGDGED--------GK 2711

Query: 85   --HGEI-----PEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDL 137
              HG+I     P+         +   A G AH  A+T  GE+YTWG  +       +G L
Sbjct: 2712 LGHGDILTLDTPKLIDSLLAKRVFYIACGSAHSAAITSDGELYTWGQGQ-------YGRL 2764

Query: 138  STGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISL 193
                 + +   +    F+ + ++  +  SR +   +  ++G     G G+ G   R    
Sbjct: 2765 GHSDEVSQHTPKLVKEFVGKNITQVACGSRDAQTLALDSEGNVYSWGDGDFGKLGR---- 2820

Query: 194  AKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQL 253
                      G  +    P  V    G R+  +  G + ++AL+  GQVW WG G   +L
Sbjct: 2821 ----------GGSDGCCTPQKVERLVGHRVVQIECGAQFSVALTATGQVWTWGKGEYYRL 2870

Query: 254  GLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSA 313
            GLG                      R   + R ++ ++     +    +  IA G  H  
Sbjct: 2871 GLG----------------------RGEHVRRPTLVNQ-----LKLVTIDHIAVGTLHCI 2903

Query: 314  VITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTI 365
             ++  G +  +G   +GQ G G+T+    P  V++   I+I  V  G   +I
Sbjct: 2904 AVSTQGDVYCWGDNDHGQQGNGTTNANQEPRLVTNFNNIKINRVGCGSSQSI 2955



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 59/216 (27%), Positives = 97/216 (44%), Gaps = 19/216 (8%)

Query: 267  PIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVK--------------GIACGGRHS 312
            P P +ES    D   A+    +N +G    + G+ VK               I  G +  
Sbjct: 2579 PQPEVESKIRVDSEYAVYVWGLNDKGQLGGLNGSKVKRPTFNEALTALKPIEIVGGSKSL 2638

Query: 313  AVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA--AGLWHTICISSD 370
             ++++ G +   G    G+ G        SP  +  L    I+ VA  +G  H + +S D
Sbjct: 2639 FIVSNEGKVFVCGDSSGGRLGIPFCGKVSSPRQIPGLSQFVIKTVAVHSGGKHAMALSLD 2698

Query: 371  GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
            G V ++G  + G+LG G       P+L+D+   + V    ++CG+ H+A I  DG+++ W
Sbjct: 2699 GKVLSWGDGEDGKLGHGDILTLDTPKLIDSLLAKRVFY--IACGSAHSAAITSDGELYTW 2756

Query: 431  GWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACG 465
            G  +YG+LG  D + ++ P  V    G     VACG
Sbjct: 2757 GQGQYGRLGHSDEVSQHTPKLVKEFVGKNITQVACG 2792



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 51/166 (30%), Positives = 82/166 (49%), Gaps = 12/166 (7%)

Query: 308  GGRHSA-VITDAGALLTFGWGLYGQCGQGSTDDE----LSPNCVSSLLGIQIEGVAAGLW 362
            GG  +   +T  G +   G+   G+ G G  + +    ++P  V  L  I    V +G  
Sbjct: 3584 GGEQTMFAVTSYGKVYASGYTESGRLGIGPYNPKNPYVVTPQLVQGLNNIIKVAVNSGGR 3643

Query: 363  HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIA 422
            H + +S+ G+VYA+G    G+LG G     + P+L+   SL +     ++CG  H+A I+
Sbjct: 3644 HCLALSTTGEVYAWGDGDDGKLGLGNRVTHSKPQLVQ--SLSDKCIIDIACGGFHSAAIS 3701

Query: 423  DDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRN---VACG 465
              G ++ WG  +YG+LG GD  D   P  V  +G +  +   VACG
Sbjct: 3702 RYGHLYTWGKGRYGRLGHGDYEDYLYPKLV--QGLINYHVVKVACG 3745



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 39/133 (29%), Positives = 65/133 (48%), Gaps = 9/133 (6%)

Query: 343  PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAE----TLPRLL 398
            P    SL  ++   V  G      ++S G VYA G  + G+LG G    +      P+L+
Sbjct: 3568 PLACDSLSVLKPTQVIGGEQTMFAVTSYGKVYASGYTESGRLGIGPYNPKNPYVVTPQLV 3627

Query: 399  DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS--QVTIEG 456
                L N+   +V+ G RH   ++  G+V+ WG    G+LGLG+ +  + P   Q   + 
Sbjct: 3628 QG--LNNIIKVAVNSGGRHCLALSTTGEVYAWGDGDDGKLGLGNRVTHSKPQLVQSLSDK 3685

Query: 457  CVPRNVACGWWHT 469
            C+  ++ACG +H+
Sbjct: 3686 CII-DIACGGFHS 3697



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 7/149 (4%)

Query: 326  WGL--YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQ 383
            WGL   GQ G  +      P    +L  ++   +  G      +S++G V+  G +  G+
Sbjct: 2598 WGLNDKGQLGGLNGSKVKRPTFNEALTALKPIEIVGGSKSLFIVSNEGKVFVCGDSSGGR 2657

Query: 384  LGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDV 443
            LG       + PR +   S   + + +V  G +H   ++ DGKV  WG  + G+LG GD+
Sbjct: 2658 LGIPFCGKVSSPRQIPGLSQFVIKTVAVHSGGKHAMALSLDGKVLSWGDGEDGKLGHGDI 2717

Query: 444  IDRNIPSQVTIEGCVPRNV---ACGWWHT 469
            +  + P    I+  + + V   ACG  H+
Sbjct: 2718 LTLDTPK--LIDSLLAKRVFYIACGSAHS 2744



 Score = 46.2 bits (108), Expect = 0.037,   Method: Composition-based stats.
 Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 5/73 (6%)

Query: 53   GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
            G  F++A+S +  L TWG  D   LG     S +H   P+P        IV+ + G  H 
Sbjct: 3799 GSQFSVALSANGTLYTWGKGDYFRLGHG---SSEHVRKPKPVSGLQGKKIVQFSTGSLHV 3855

Query: 111  VAVTEGGEVYTWG 123
            +A+T+ GEVY WG
Sbjct: 3856 LALTDDGEVYAWG 3868



 Score = 43.5 bits (101), Expect = 0.22,   Method: Composition-based stats.
 Identities = 52/223 (23%), Positives = 88/223 (39%), Gaps = 43/223 (19%)

Query: 234 LALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGP 293
           LA++  G+V+ WG    G LG G +     +P PI             A S+        
Sbjct: 505 LAVTQKGEVYSWGVNEFGALGHGQKYSSFPTPEPI------------VAFSK-------- 544

Query: 294 GFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ 353
                   V  ++CG    A +T+ G L  +G  L+      S++   +P  V S+    
Sbjct: 545 ------LIVVMVSCGKDFCAAVTEDGKLYMWGKILH------SSNCCYTPELVKSISEWH 592

Query: 354 IEGVAAG--LWHTICISSDGDVYAFGGNQFGQLGTGGDQAE--TLPRLLDAPSLENVHSK 409
           +  V+ G  + +T+ +S +G V++F   ++     G D      +P ++    + +    
Sbjct: 593 VSKVSCGSSINNTLALSREGYVFSF---EYRNSDRGCDDKSLNVIPSMI----VFDYEIV 645

Query: 410 SVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
           S+ C     AVI     VF WG      LG  +    N P +V
Sbjct: 646 SIYCHNDVNAVIDCANNVFTWGRGNNNMLGHNNSFRVNRPKEV 688


>gi|302803630|ref|XP_002983568.1| hypothetical protein SELMODRAFT_118244 [Selaginella moellendorffii]
 gi|300148811|gb|EFJ15469.1| hypothetical protein SELMODRAFT_118244 [Selaginella moellendorffii]
          Length = 413

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 125/285 (43%), Gaps = 40/285 (14%)

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSP-----HPIPCIESSYGKDR 279
           +V+ GG HTL L+D G+V+  G    GQLG+  +      P      P PC+  + G+  
Sbjct: 65  SVSCGGAHTLILTDKGRVFATGLNSSGQLGVPLKSESSFDPVEVHGFPDPCVHIAAGRYH 124

Query: 280 SAALS---------RGSVNSEGPGFRVPGNYV-------------KGIACGGRHSAVITD 317
           SAA++         R S    G G R    Y+             K +A G  HS  + +
Sbjct: 125 SAAITSSGETYVWGRNSEGQLGLGKRAKSVYITPQKMESLAGMRLKALALGTDHSLGLAE 184

Query: 318 AGALLTFGWGLYGQCGQGSTD---------DELSPNCVSSLLGIQIEGVAAGLWHTICIS 368
            G +L++G   +G  G G            +E +P  +  L  +Q+  V+AGL H+ C  
Sbjct: 185 TGQVLSWGTNRFGCLGHGEMTGFFDFFKDTNEYTPRIIHCLEKLQVRSVSAGLVHSACAD 244

Query: 369 SDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVF 428
             G +Y+FG     QLG G +   + P     P L  V   S+SCG  HT  I  DG ++
Sbjct: 245 DSGTIYSFGQGSMCQLGLGNNNDASQP--CPIPDLPRV--SSISCGGYHTGAITQDGDIY 300

Query: 429 CWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
            WG N++G LG G           ++       ++CGW HT  ++
Sbjct: 301 TWGSNEHGCLGSGFRASSKPLRLESLAEAFMSEISCGWKHTAAIS 345



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 86/293 (29%), Positives = 135/293 (46%), Gaps = 55/293 (18%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS--------------------SP 265
           +AAG  H+ A++  G+ + WG   EGQLGLG R + V                     + 
Sbjct: 118 IAAGRYHSAAITSSGETYVWGRNSEGQLGLGKRAKSVYITPQKMESLAGMRLKALALGTD 177

Query: 266 HPIPCIES----SYGKDRSAALSRGSVNSEGPGFRVPGNY------------VKGIACGG 309
           H +   E+    S+G +R   L  G +      F+    Y            V+ ++ G 
Sbjct: 178 HSLGLAETGQVLSWGTNRFGCLGHGEMTGFFDFFKDTNEYTPRIIHCLEKLQVRSVSAGL 237

Query: 310 RHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISS 369
            HSA   D+G + +FG G   Q G G+ +D   P  +  L   ++  ++ G +HT  I+ 
Sbjct: 238 VHSACADDSGTIYSFGQGSMCQLGLGNNNDASQPCPIPDL--PRVSSISCGGYHTGAITQ 295

Query: 370 DGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFC 429
           DGD+Y +G N+ G LG+G  +A + P  L+  SL       +SCG +HTA I+ DG +F 
Sbjct: 296 DGDIYTWGSNEHGCLGSG-FRASSKPLRLE--SLAEAFMSEISCGWKHTAAIS-DGYIFS 351

Query: 430 WGW------------NKYGQLGLGDVIDRNIPSQVTIEGCVPR-NVACGWWHT 469
           WGW            +  GQLG+G   D   P  + ++  +   +V+CG+ HT
Sbjct: 352 WGWGGSYGTYATQAESSGGQLGVGTDFDFFEPVPIEMDDRLSALHVSCGFNHT 404



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 89/356 (25%), Positives = 137/356 (38%), Gaps = 73/356 (20%)

Query: 92  FPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRV-FGDLSTGTGLDKDVFER 150
           FP P     V  AAG  H  A+T  GE Y WG       G++  G  +    +     E 
Sbjct: 111 FPDP----CVHIAAGRYHSAAITSSGETYVWGRNS---EGQLGLGKRAKSVYITPQKMES 163

Query: 151 QSSFLTEQVSPRSQVSRSSGGT----SSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDE 206
            +    + ++  +  S     T    S GT+  G    G         K T E +     
Sbjct: 164 LAGMRLKALALGTDHSLGLAETGQVLSWGTNRFGCLGHGEMTGFFDFFKDTNEYT----- 218

Query: 207 NLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPH 266
                P ++     +++ +V+AG  H+    D G ++ +G G   QLGLG+     S P 
Sbjct: 219 -----PRIIHCLEKLQVRSVSAGLVHSACADDSGTIYSFGQGSMCQLGLGNN-NDASQPC 272

Query: 267 PIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGW 326
           PIP +                              V  I+CGG H+  IT  G + T+G 
Sbjct: 273 PIPDLPR----------------------------VSSISCGGYHTGAITQDGDIYTWGS 304

Query: 327 GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG--------- 377
             +G  G G       P  + SL    +  ++ G  HT  IS DG ++++G         
Sbjct: 305 NEHGCLGSGFRASS-KPLRLESLAEAFMSEISCGWKHTAAIS-DGYIFSWGWGGSYGTYA 362

Query: 378 ------GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKV 427
                 G Q G +GT  D  E +P  +D    + + +  VSCG  HTA I ++ ++
Sbjct: 363 TQAESSGGQLG-VGTDFDFFEPVPIEMD----DRLSALHVSCGFNHTAAILEEIEI 413



 Score = 46.2 bits (108), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 66/153 (43%), Gaps = 7/153 (4%)

Query: 325 GWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQL 384
           G G  G+ G   +  +  P    +L   +   V+ G  HT+ ++  G V+A G N  GQL
Sbjct: 34  GNGDQGRLGLSESGSQFEPVLCRALESHEPCSVSCGGAHTLILTDKGRVFATGLNSSGQL 93

Query: 385 GTGGDQAETL-PRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDV 443
           G       +  P  +       VH   ++ G  H+A I   G+ + WG N  GQLGLG  
Sbjct: 94  GVPLKSESSFDPVEVHGFPDPCVH---IAAGRYHSAAITSSGETYVWGRNSEGQLGLGKR 150

Query: 444 IDRNIPSQVTIE---GCVPRNVACGWWHTLLLA 473
                 +   +E   G   + +A G  H+L LA
Sbjct: 151 AKSVYITPQKMESLAGMRLKALALGTDHSLGLA 183



 Score = 42.0 bits (97), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 36/68 (52%), Gaps = 2/68 (2%)

Query: 373 VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGW 432
           V  +G    G+LG     ++  P L  A  LE+    SVSCG  HT ++ D G+VF  G 
Sbjct: 30  VALWGNGDQGRLGLSESGSQFEPVLCRA--LESHEPCSVSCGGAHTLILTDKGRVFATGL 87

Query: 433 NKYGQLGL 440
           N  GQLG+
Sbjct: 88  NSSGQLGV 95


>gi|47214126|emb|CAG01384.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 4628

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 83/251 (33%), Positives = 122/251 (48%), Gaps = 32/251 (12%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            +R   V +GG+H LALS  G+V+ WG   +G+LG G+R          PC       DR 
Sbjct: 3844 IRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS---------PC-------DRP 3887

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
              +             + G  V  IA GG HSA IT +G L T+G G YG+ G G ++D+
Sbjct: 3888 RVIES-----------LRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQ 3936

Query: 341  LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V +L G ++  VA  +G   T+C++ D  V+++G   +G+LG GG      P  +
Sbjct: 3937 LKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKTPMKI 3996

Query: 399  DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGC 457
            D  SL  +    V CG++ +  +   G V+ WG   Y +LG G       P QV  ++G 
Sbjct: 3997 D--SLTGLGVIKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGK 4054

Query: 458  VPRNVACGWWH 468
                +A G  H
Sbjct: 4055 KVIAIATGSLH 4065



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 135/266 (50%), Gaps = 30/266 (11%)

Query: 212 PCLVTLNPGVRIATVAA--GGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP 269
           P L+      ++  +AA   G+H LALS  G+V+ WG G  G+LG G    +       P
Sbjct: 447 PMLIHSLSSRKMVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDTTYLEE-----P 501

Query: 270 CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
            + +++   ++                  G +V  IACG  +SA IT  G L T+G G Y
Sbjct: 502 TMIAAFNGKQA------------------GKHVVHIACGSTYSAAITVDGELYTWGRGNY 543

Query: 330 GQCGQGSTDDELSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTG 387
           G+ G GS++D+ +P  V++L G+++  VA  +G   T+ ++ +G V+++G   +G+LG G
Sbjct: 544 GRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 603

Query: 388 GDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
           G      P+L++   L+++    V CG++ +  +  DG+V+ WG     +LG G      
Sbjct: 604 GSDGCKTPKLVE--KLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVR 661

Query: 448 IPSQV-TIEGCVPRNVACGWWHTLLL 472
            P  + T++G    +VA G  H L L
Sbjct: 662 FPKLLDTLQGKKVVDVAVGSTHCLAL 687



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 130/306 (42%), Gaps = 80/306 (26%)

Query: 218  NPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
            N  V+   V +GGRH +AL+  G+V+ WG G +G+LG  SR+     P  I  +++   +
Sbjct: 2815 NYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKAKRIR 2873

Query: 278  DRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST 337
            D                          IACG  HSA IT +G L ++G G YG+ G G  
Sbjct: 2874 D--------------------------IACGSSHSAAITSSGELYSWGLGEYGRLGHGDN 2907

Query: 338  DDELSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLP 395
              +L P  V  LLG ++  VA G     T+ ++ +G V+++G   FG+LG GG +   +P
Sbjct: 2908 TTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIP 2967

Query: 396  RLLDAPSLE------------------------------------NVHSKS--------- 410
            + ++  + +                                    +VH +          
Sbjct: 2968 QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRG 3027

Query: 411  -----VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVAC 464
                 V+ GA H   + D G+V+ WG N +GQ G G       P+ V  +EG     VAC
Sbjct: 3028 KKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVAC 3087

Query: 465  GWWHTL 470
            G  H++
Sbjct: 3088 GSSHSV 3093



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 97/337 (28%), Positives = 136/337 (40%), Gaps = 67/337 (19%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V   +G  HC+A++  GEVY+WG  E         D   G G ++   +R    + E + 
Sbjct: 3847 VAVNSGGKHCLALSSEGEVYSWGEAE---------DGKLGHG-NRSPCDRPR--VIESLR 3894

Query: 161  PRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPG 220
                V  ++GG  S      SGE        +  K        GD      P LV    G
Sbjct: 3895 GVEVVDIAAGGAHSACIT-ASGE------LFTWGKGRYGRLGHGDSEDQLKPKLVDALQG 3947

Query: 221  VRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
             R+  VA  +G   TL L+D   VW WG G  G+LG G                   G D
Sbjct: 3948 HRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRG-------------------GSD 3988

Query: 279  RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
                 +   ++S      + G  V  + CG + S  +T +GA+ T+G G Y + G GS D
Sbjct: 3989 --GCKTPMKIDS------LTGLGVIKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4040

Query: 339  DELSPNCVSSLLGIQIEGVAAGLWHTICISSD-----------------GDVYAFGGNQF 381
                P  V  L G ++  +A G  H +C + D                 G+VY +G N  
Sbjct: 4041 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGRIKVFQWGLPRWSLGLGEVYTWGDNDE 4100

Query: 382  GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
            GQLG G   A   PRL+ A  L+      V+CG+ HT
Sbjct: 4101 GQLGDGTTNAIQRPRLVAA--LQGKKINRVACGSAHT 4135



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 106/389 (27%), Positives = 161/389 (41%), Gaps = 60/389 (15%)

Query: 65   KLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGW 124
            K+  WG  +D  Q     G   ++P      +  ++V+ A G     AVT  G++Y  G 
Sbjct: 2731 KVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYACGE 2789

Query: 125  KECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSS---GTDGR-- 179
                 +GR+   LS+GT        RQ + L+  V  +  V+  SGG  +     DG+  
Sbjct: 2790 ---ATNGRLGLGLSSGTI----PIPRQITALSNYVVKK--VAVHSGGRHAMALTVDGKVF 2840

Query: 180  --GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS 237
              G G++G         K    S  + D+     P L+      RI  +A G  H+ A++
Sbjct: 2841 SWGEGDDG---------KLGHFSRMNCDK-----PRLIEALKAKRIRDIACGSSHSAAIT 2886

Query: 238  DIGQVWGWGYGGEGQLGLGS-----RIRMVSSPHPIPCIESSYGKDRSAALS---RGSVN 289
              G+++ WG G  G+LG G      R ++V        I+ + G   +  L+    G V 
Sbjct: 2887 SSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 2946

Query: 290  SEGPG-------------------FRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
            S G G                    R+ G  V  I CG + S  +T +G + T+G G Y 
Sbjct: 2947 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 3006

Query: 331  QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            + G G+      P  V  L G +I  VA G  H + ++  G VYA+G N  GQ G G   
Sbjct: 3007 RLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTT 3066

Query: 391  AETLPRLLDAPSLENVHSKSVSCGARHTA 419
                P L+    LE      V+CG+ H+ 
Sbjct: 3067 VNRKPTLVQG--LEGQKITRVACGSSHSV 3093



 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 119/246 (48%), Gaps = 39/246 (15%)

Query: 225  TVAAGGRHTLALSDIGQVWGWGYGGEGQLG--LGSRIRM------VSSPHPIPCI---ES 273
            T++AGG         G ++GWG+   GQLG   G+++++      +++  P+  I   ++
Sbjct: 3750 TLSAGGS--------GTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQT 3801

Query: 274  SYGKDRSAAL--------------SRGSVNSEGPGFRVPGNYVKGIAC--GGRHSAVITD 317
             +       L                 SV++      +   +++ +A   GG+H   ++ 
Sbjct: 3802 LFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSS 3861

Query: 318  AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
             G + ++G    G+ G G+      P  + SL G+++  +AAG  H+ CI++ G+++ +G
Sbjct: 3862 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWG 3921

Query: 378  GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGA--RHTAVIADDGKVFCWGWNKY 435
              ++G+LG G  + +  P+L+DA  L+      V+CG+    T  + DD  V+ WG   Y
Sbjct: 3922 KGRYGRLGHGDSEDQLKPKLVDA--LQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDY 3979

Query: 436  GQLGLG 441
            G+LG G
Sbjct: 3980 GKLGRG 3985



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 96/227 (42%), Gaps = 52/227 (22%)

Query: 212 PCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP 269
           P LVT   G+++  VA  +G   TLA+++ GQVW WG G  G+LG G             
Sbjct: 557 PMLVTALKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG------------- 603

Query: 270 CIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITDAGALLTFGWG 327
                           GS   + P    ++    +  + CG + S  +T  G + T+G G
Sbjct: 604 ----------------GSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKG 647

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN----QFGQ 383
              + G G+ +    P  + +L G ++  VA G  H + ++ DG+V+++G N     F  
Sbjct: 648 DNQRLGHGTDEHVRFPKLLDTLQGKKVVDVAVGSTHCLALTDDGEVHSWGSNDKLQHFDT 707

Query: 384 LGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
           L +   Q + L      P L + H   +SCG          G+ F W
Sbjct: 708 LFSNKKQPKAL------PGLNSKHIVGISCGP---------GQSFAW 739



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 122/274 (44%), Gaps = 44/274 (16%)

Query: 205  DENLSAFPCLVTLNP---GVRIATVAAGGRHTLALSDIG----QVWGWGYGGEGQLG--L 255
            DE+L+  P L + N      + AT +   + +  L   G    +V+ WG   + QLG   
Sbjct: 2688 DEDLATVPFLASDNEEEDDDKAATGSLARKKSSGLESAGTIRTKVFVWGLNDKDQLGGLK 2747

Query: 256  GSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVI 315
            GS+I++            S+ +  SA                  N V+ +A G +    +
Sbjct: 2748 GSKIKV-----------PSFSETLSAL-----------------NVVQ-VAGGSKSLFAV 2778

Query: 316  TDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVA--AGLWHTICISSDGD 372
            T  G +   G    G+ G G +   +  P  +++L    ++ VA  +G  H + ++ DG 
Sbjct: 2779 TVEGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGK 2838

Query: 373  VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGW 432
            V+++G    G+LG         PRL++A   + +  + ++CG+ H+A I   G+++ WG 
Sbjct: 2839 VFSWGEGDDGKLGHFSRMNCDKPRLIEALKAKRI--RDIACGSSHSAAITSSGELYSWGL 2896

Query: 433  NKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACG 465
             +YG+LG GD   +  P  V +  G     VACG
Sbjct: 2897 GEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACG 2930



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 81/310 (26%), Positives = 122/310 (39%), Gaps = 47/310 (15%)

Query: 57   AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEG 116
            AMA++   K+ +WG  DD G+    S  + + P          I   A G +H  A+T  
Sbjct: 2830 AMALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRLIEALKAKRIRDIACGSSHSAAITSS 2888

Query: 117  GEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGT 176
            GE+Y+WG  E    GR+ G     T L   + +        QV+  S+ +++   T  G 
Sbjct: 2889 GELYSWGLGE---YGRL-GHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGL 2944

Query: 177  DGR-GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLA 235
                G G+ G   R              G E  +    +  LN G  +  +  G + +LA
Sbjct: 2945 VFSWGDGDFGKLGR-------------GGSEGCNIPQNIERLN-GQGVCQIECGAQFSLA 2990

Query: 236  LSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF 295
            L+  G VW WG G   +LG G+ +  V  P  +                         G 
Sbjct: 2991 LTKSGVVWTWGKGDYFRLGHGTDVH-VRKPQMV------------------------EGL 3025

Query: 296  RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
            R  G  +  +A G  H   +TD G +  +G   +GQ G G+T     P  V  L G +I 
Sbjct: 3026 R--GKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKIT 3083

Query: 356  GVAAGLWHTI 365
             VA G  H++
Sbjct: 3084 RVACGSSHSV 3093



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 3/78 (3%)

Query: 48  DVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAA 105
           D+    CG  F++A++   ++ TWG  D+    + T  +H   P+         +V  A 
Sbjct: 621 DIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTD-EHVRFPKLLDTLQGKKVVDVAV 679

Query: 106 GWAHCVAVTEGGEVYTWG 123
           G  HC+A+T+ GEV++WG
Sbjct: 680 GSTHCLALTDDGEVHSWG 697


>gi|242014091|ref|XP_002427731.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
 gi|212512172|gb|EEB14993.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
          Length = 4834

 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 86/274 (31%), Positives = 132/274 (48%), Gaps = 38/274 (13%)

Query: 204  GDENLSAFPC-LVTLNPGV-RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
            G  N  A PC L +LN  V +   V +GG+H +AL+  G+V+ WG G +G+LG  +R+ +
Sbjct: 3053 GHSNNVATPCQLTSLNQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHDNRLSL 3112

Query: 262  VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
               P  I  ++S   +D                          IACG  HSA I+  G L
Sbjct: 3113 -DRPKMIEALKSKRIRD--------------------------IACGSSHSAAISSTGEL 3145

Query: 322  LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGN 379
             T+G G YG+ G G    +L P  V +LLG  I  VA G     T+ +S++G V+++G  
Sbjct: 3146 FTWGLGEYGRLGHGDNLTQLRPKLVKALLGHHIVQVACGSRDAQTLALSAEGLVFSWGDG 3205

Query: 380  QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG 439
             FG+LG GG +   +P   +   L  +    + CGA+ +  +   G+V+ WG   Y +LG
Sbjct: 3206 DFGKLGRGGSEGCDIPH--NIERLNGLGVCMIECGAQFSLALTKFGQVYTWGKGDYFRLG 3263

Query: 440  LGDVIDRNIPSQVTIEGCVPR---NVACGWWHTL 470
             G   D+++     +E    +   +VA G  H L
Sbjct: 3264 HGS--DQHVRKPTLVESLSEKKIVHVAVGALHCL 3295



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 84/303 (27%), Positives = 135/303 (44%), Gaps = 80/303 (26%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            ++   V +GG+H LALS  G+V+ WG G +G+LG G++       HP   I++  GK+  
Sbjct: 4055 IKKVAVNSGGKHCLALSTDGKVYSWGEGDDGKLGHGNK---NGCDHP-QLIDALQGKE-- 4108

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                 +  IACGG HSA +T  G + T+G G YG+ G G ++D+
Sbjct: 4109 ---------------------IVDIACGGAHSAAVTAGGEIYTWGKGRYGRLGHGDSEDQ 4147

Query: 341  LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            + P  V +L+G ++  +A  +G   T+CI+ D +V+++G   +G+LG GG     +P  +
Sbjct: 4148 MKPKLVETLIGFKVIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKIPMKI 4207

Query: 399  DA-----------------------------------------------PSLENVHSKSV 411
            ++                                                 +  +  K +
Sbjct: 4208 ESLAGLGVVKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGSDEHVRHPKKIAALQGKKI 4267

Query: 412  SC---GARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ-VTIEGCVPRNVACGWW 467
             C   G+ H    +D G+VF WG N  GQLG G +   + P   VT++G     VACG  
Sbjct: 4268 ICIATGSLHCVACSDLGEVFTWGDNDEGQLGDGTMNAIHRPRLVVTLQGKNINRVACGSA 4327

Query: 468  HTL 470
            H+L
Sbjct: 4328 HSL 4330



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 73/234 (31%), Positives = 103/234 (44%), Gaps = 29/234 (12%)

Query: 212  PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS-----RIRMVSSP- 265
            P ++      RI  +A G  H+ A+S  G+++ WG G  G+LG G      R ++V +  
Sbjct: 3115 PKMIEALKSKRIRDIACGSSHSAAISSTGELFTWGLGEYGRLGHGDNLTQLRPKLVKALL 3174

Query: 266  -HPIPCIESSYGKDRSAALS-RGSVNSEG------------PGFRVPGNY-------VKG 304
             H I  +       ++ ALS  G V S G             G  +P N        V  
Sbjct: 3175 GHHIVQVACGSRDAQTLALSAEGLVFSWGDGDFGKLGRGGSEGCDIPHNIERLNGLGVCM 3234

Query: 305  IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
            I CG + S  +T  G + T+G G Y + G GS      P  V SL   +I  VA G  H 
Sbjct: 3235 IECGAQFSLALTKFGQVYTWGKGDYFRLGHGSDQHVRKPTLVESLSEKKIVHVAVGALHC 3294

Query: 365  ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
            +C +  G VYA+G N  GQ G G       P L+   +LE V    V+CG+ H+
Sbjct: 3295 LCATDQGQVYAWGDNDHGQQGNGTILVNRKPSLV--LNLEGVRVNRVACGSSHS 3346



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 112/242 (46%), Gaps = 29/242 (11%)

Query: 204  GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS-----R 258
            G++N    P L+    G  I  +A GG H+ A++  G+++ WG G  G+LG G      +
Sbjct: 4090 GNKNGCDHPQLIDALQGKEIVDIACGGAHSAAVTAGGEIYTWGKGRYGRLGHGDSEDQMK 4149

Query: 259  IRMVSSPHPIPCIESSYGKDRSAAL--------------SRGSVNSEGP-GFRVPGNY-- 301
             ++V +      I+ + G   +  L                G +   G  G ++P     
Sbjct: 4150 PKLVETLIGFKVIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIES 4209

Query: 302  -----VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG 356
                 V  + CG + S  +T +G++ T+G G Y + G GS +    P  +++L G +I  
Sbjct: 4210 LAGLGVVKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGSDEHVRHPKKIAALQGKKIIC 4269

Query: 357  VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR 416
            +A G  H +  S  G+V+ +G N  GQLG G   A   PRL+   +L+  +   V+CG+ 
Sbjct: 4270 IATGSLHCVACSDLGEVFTWGDNDEGQLGDGTMNAIHRPRLV--VTLQGKNINRVACGSA 4327

Query: 417  HT 418
            H+
Sbjct: 4328 HS 4329



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/265 (25%), Positives = 116/265 (43%), Gaps = 32/265 (12%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
           GD N    P  +T   G  +  ++ G  ++ A++  G+V+ WG G  G+LG G+     S
Sbjct: 556 GDNNSRDQPTKITELVGKNVIHISCGATYSAAVTSSGEVYTWGRGNYGRLGHGT-----S 610

Query: 264 SPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLT 323
             H +P +                         +   ++  IACG   +  +      L 
Sbjct: 611 EDHTVPTLVVG----------------------LKDYFIVDIACGSGDAQTLAVTNTGLV 648

Query: 324 FGWG--LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
           F WG   YG+ G G +D   +P  +  L  I++  V  G   ++ ++  G VY +G    
Sbjct: 649 FSWGDGGYGKLGTGGSDGSKTPKLIEKLQDIEVARVYCGSQFSLALTKSGSVYTWGKGDN 708

Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
            +LG G +     P+L++   L     K V+ G+ H   + DDG+V+ WG N  GQ+G  
Sbjct: 709 HRLGHGSENHVRFPKLVEG--LNGKCIKKVAVGSGHVLALTDDGEVYGWGRNDNGQVGET 766

Query: 442 DVIDRNIPSQVT-IEGCVPRNVACG 465
              + + P+ +T ++G    ++ CG
Sbjct: 767 SETNVSEPTLLTLLQGKNIVDIDCG 791



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 109/229 (47%), Gaps = 29/229 (12%)

Query: 226  VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
            +A G +    +S  G+++  G G  G+LGLG      S+    PC  +S  +     + +
Sbjct: 3023 IAGGSKSLFIVSYDGKLYACGEGTNGRLGLGH-----SNNVATPCQLTSLNQ---YVIKK 3074

Query: 286  GSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNC 345
             +V+S                 GG+H+  +T  G + ++G G  G+ G  +      P  
Sbjct: 3075 VAVHS-----------------GGKHAMALTLDGKVFSWGEGEDGKLGHDNRLSLDRPKM 3117

Query: 346  VSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLEN 405
            + +L   +I  +A G  H+  ISS G+++ +G  ++G+LG G +  +  P+L+ A  L  
Sbjct: 3118 IEALKSKRIRDIACGSSHSAAISSTGELFTWGLGEYGRLGHGDNLTQLRPKLVKA--LLG 3175

Query: 406  VHSKSVSCGAR--HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
             H   V+CG+R   T  ++ +G VF WG   +G+LG G     +IP  +
Sbjct: 3176 HHIVQVACGSRDAQTLALSAEGLVFSWGDGDFGKLGRGGSEGCDIPHNI 3224



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 83/179 (46%), Gaps = 15/179 (8%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           VK I C  R   ++T  G +    +    QC          P  +    G +I  +AA  
Sbjct: 479 VKQIVCAERWLLILTLTGKVYIMYYSSETQC----------PEQIEGFDGKEISKLAAHA 528

Query: 362 --WHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
              H++ +S DGDVY++G    G+LG G + +   P  +     +NV    +SCGA ++A
Sbjct: 529 DGKHSLALSCDGDVYSWGNGDGGRLGHGDNNSRDQPTKITELVGKNV--IHISCGATYSA 586

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLAVPPT 477
            +   G+V+ WG   YG+LG G   D  +P+ V  ++     ++ACG      LAV  T
Sbjct: 587 AVTSSGEVYTWGRGNYGRLGHGTSEDHTVPTLVVGLKDYFIVDIACGSGDAQTLAVTNT 645



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 89/170 (52%), Gaps = 7/170 (4%)

Query: 301  YVKGIAC--GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
            ++K +A   GG+H   ++  G + ++G G  G+ G G+ +    P  + +L G +I  +A
Sbjct: 4054 FIKKVAVNSGGKHCLALSTDGKVYSWGEGDDGKLGHGNKNGCDHPQLIDALQGKEIVDIA 4113

Query: 359  AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGA--R 416
             G  H+  +++ G++Y +G  ++G+LG G  + +  P+L++  +L       ++CG+   
Sbjct: 4114 CGGAHSAAVTAGGEIYTWGKGRYGRLGHGDSEDQMKPKLVE--TLIGFKVIDIACGSGDA 4171

Query: 417  HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
             T  I DD  V+ WG   YG+LG G      IP ++ ++ G     V CG
Sbjct: 4172 QTLCITDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVVKVECG 4221



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 78/315 (24%), Positives = 123/315 (39%), Gaps = 57/315 (18%)

Query: 57   AMAISDSRKLITWGSTDD--LGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVT 114
            AMA++   K+ +WG  +D  LG     S    ++ E         I   A G +H  A++
Sbjct: 3084 AMALTLDGKVFSWGEGEDGKLGHDNRLSLDRPKMIEAL---KSKRIRDIACGSSHSAAIS 3140

Query: 115  EGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSS 174
              GE++TWG  E       +G L  G  L +   +   + L   +   +  SR +   + 
Sbjct: 3141 STGELFTWGLGE-------YGRLGHGDNLTQLRPKLVKALLGHHIVQVACGSRDAQTLAL 3193

Query: 175  GTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGG 230
              +G     G G+ G   R              G E       +  LN G+ +  +  G 
Sbjct: 3194 SAEGLVFSWGDGDFGKLGR-------------GGSEGCDIPHNIERLN-GLGVCMIECGA 3239

Query: 231  RHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNS 290
            + +LAL+  GQV+ WG G   +LG GS  + V  P     +ES   K             
Sbjct: 3240 QFSLALTKFGQVYTWGKGDYFRLGHGSD-QHVRKP---TLVESLSEKK------------ 3283

Query: 291  EGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLL 350
                       +  +A G  H    TD G +  +G   +GQ G G+      P+ V +L 
Sbjct: 3284 -----------IVHVAVGALHCLCATDQGQVYAWGDNDHGQQGNGTILVNRKPSLVLNLE 3332

Query: 351  GIQIEGVAAGLWHTI 365
            G+++  VA G  H+I
Sbjct: 3333 GVRVNRVACGSSHSI 3347



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 92/229 (40%), Gaps = 33/229 (14%)

Query: 204  GDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLG----S 257
            GD      P LV    G ++  +A  +G   TL ++D   VW WG G  G+LG G     
Sbjct: 4142 GDSEDQMKPKLVETLIGFKVIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGC 4201

Query: 258  RIRM-VSSPHPIPCIESSYGKDRSAALSR-GSVNSEGPG------------FRVP----- 298
            +I M + S   +  ++   G   S AL+R GSV + G G             R P     
Sbjct: 4202 KIPMKIESLAGLGVVKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGSDEHVRHPKKIAA 4261

Query: 299  --GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG 356
              G  +  IA G  H    +D G + T+G    GQ G G+ +    P  V +L G  I  
Sbjct: 4262 LQGKKIICIATGSLHCVACSDLGEVFTWGDNDEGQLGDGTMNAIHRPRLVVTLQGKNINR 4321

Query: 357  VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLEN 405
            VA G  H++  S++    A        L         L R +  P+L N
Sbjct: 4322 VACGSAHSLAWSTNKSTSA------THLPVDAPMEYDLVRDISLPTLRN 4364



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 76/171 (44%), Gaps = 4/171 (2%)

Query: 302  VKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTDDELSPNCVSSLLGIQIEGVAA 359
            VK ++    HS + +D+   + F WGL    Q G         P    SL  ++   +A 
Sbjct: 2967 VKTLSETSSHSKLWSDSPTKV-FVWGLNDKDQLGGLKGSKVKVPVYSESLTALKPIHIAG 3025

Query: 360  GLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            G      +S DG +YA G    G+LG G       P  L + +   +   +V  G +H  
Sbjct: 3026 GSKSLFIVSYDGKLYACGEGTNGRLGLGHSNNVATPCQLTSLNQYVIKKVAVHSGGKHAM 3085

Query: 420  VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
             +  DGKVF WG  + G+LG  + +  + P  +  ++    R++ACG  H+
Sbjct: 3086 ALTLDGKVFSWGEGEDGKLGHDNRLSLDRPKMIEALKSKRIRDIACGSSHS 3136



 Score = 44.7 bits (104), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 3/77 (3%)

Query: 49   VCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAG 106
            VC   CG  F++A++   ++ TWG  D     +  S +H   P      +E  IV  A G
Sbjct: 3232 VCMIECGAQFSLALTKFGQVYTWGKGDYFRLGH-GSDQHVRKPTLVESLSEKKIVHVAVG 3290

Query: 107  WAHCVAVTEGGEVYTWG 123
              HC+  T+ G+VY WG
Sbjct: 3291 ALHCLCATDQGQVYAWG 3307



 Score = 42.0 bits (97), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 3/149 (2%)

Query: 324  FGWGL--YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
            +GWG    GQ G         P    +L  ++   +  G    + ++SDG VYA G    
Sbjct: 3971 YGWGHNHRGQLGGVEGPKVKIPTSCEALSALRPVQLVGGEQTLLAVTSDGKVYATGYGAG 4030

Query: 382  GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
            G+LG GG      P LL++     +   +V+ G +H   ++ DGKV+ WG    G+LG G
Sbjct: 4031 GRLGLGGTDTILTPTLLESIQHIFIKKVAVNSGGKHCLALSTDGKVYSWGEGDDGKLGHG 4090

Query: 442  DVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            +    + P  +  ++G    ++ACG  H+
Sbjct: 4091 NKNGCDHPQLIDALQGKEIVDIACGGAHS 4119


>gi|242059927|ref|XP_002459109.1| hypothetical protein SORBIDRAFT_03g046020 [Sorghum bicolor]
 gi|241931084|gb|EES04229.1| hypothetical protein SORBIDRAFT_03g046020 [Sorghum bicolor]
          Length = 892

 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 63/171 (36%), Positives = 100/171 (58%), Gaps = 4/171 (2%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ I+CGGRH+A++T  G + ++G    G+ G G   D   P  + +L  + IE VA G 
Sbjct: 112 VQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVSQPKLIDALSHMNIELVACGE 171

Query: 362 WHTICISSDGDVYAFGGN--QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
           +HT  ++  GD+Y +G    +FG LG G D +  +P+ ++ P LE +H  S+SCG  HTA
Sbjct: 172 YHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKHVNGP-LEGIHVSSISCGPWHTA 230

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
           ++   G++F +G   +G LG GD    ++P +V +++G      ACG WHT
Sbjct: 231 LVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESLKGLRTVRAACGVWHT 281



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 125/279 (44%), Gaps = 49/279 (17%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYG--GEGQLGLGSRIRMVSSPHPIP 269
           P L+     + I  VA G  HT A++  G ++ WG G    G LG G+ +      H +P
Sbjct: 153 PKLIDALSHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVS-----HWVP 207

Query: 270 CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
                             VN  GP   + G +V  I+CG  H+A++T AG L TFG G +
Sbjct: 208 ----------------KHVN--GP---LEGIHVSSISCGPWHTALVTSAGQLFTFGDGSF 246

Query: 330 GQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI------------SSDGDVYAFG 377
           G  G G  +    P  V SL G++    A G+WHT  +             S G ++ +G
Sbjct: 247 GVLGHGDRESISVPREVESLKGLRTVRAACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWG 306

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQ 437
               G+LG G  +A+ +P  + A  L   +   V+CG   T  +   G V+  G   YGQ
Sbjct: 307 DGDKGRLGHGDKEAKLVPTCVAA--LVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQ 364

Query: 438 LGLGDVIDRNIPSQVTIEGCVPRN----VACGWWHTLLL 472
           LG     D  +P  V +EG + +N    ++CG +H  +L
Sbjct: 365 LG-NTQADGMLP--VRVEGKLHKNFVEEISCGAYHVAVL 400



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 74/138 (53%), Gaps = 6/138 (4%)

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D L P  +   + + ++ ++ G  H   ++  G++Y++G    G+LG G D   + P+L+
Sbjct: 97  DCLVPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVSQPKLI 156

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCW--GWNKYGQLGLGDVIDRNIPSQVT--I 454
           DA S  N+  + V+CG  HT  +   G ++ W  G  K+G LG G+ +   +P  V   +
Sbjct: 157 DALSHMNI--ELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKHVNGPL 214

Query: 455 EGCVPRNVACGWWHTLLL 472
           EG    +++CG WHT L+
Sbjct: 215 EGIHVSSISCGPWHTALV 232



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 100/231 (43%), Gaps = 43/231 (18%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDI------------GQVWGWGYGGEG 251
           GD    + P  V    G+R    A G  HT A+ ++            G+++ WG G +G
Sbjct: 252 GDRESISVPREVESLKGLRTVRAACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKG 311

Query: 252 QLGLGSR-IRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGR 310
           +LG G +  ++V +     C+         AAL             V  N+ + +ACG  
Sbjct: 312 RLGHGDKEAKLVPT-----CV---------AAL-------------VEPNFCQ-VACGHC 343

Query: 311 HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
            +  +T +G + T G  +YGQ G    D  L       L    +E ++ G +H   ++S 
Sbjct: 344 LTVALTTSGHVYTMGSAVYGQLGNTQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSR 403

Query: 371 GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
            +VY +G    G+LG G    +  P L++A  L++   +SV CG   TA I
Sbjct: 404 TEVYTWGKGANGRLGHGDTDDKNTPTLVEA--LKDKQVRSVVCGINFTAAI 452


>gi|444516740|gb|ELV11273.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
          Length = 3151

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 123/251 (49%), Gaps = 32/251 (12%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            ++   V +GG+H LALS  G+V+ WG   +G+LG GSR          PC       DR 
Sbjct: 2347 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSR---------SPC-------DRP 2390

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
              +             + G  V  +A GG HSA +T AG L T+G G YG+ G   ++D+
Sbjct: 2391 RVIE-----------SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQ 2439

Query: 341  LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V +L G ++ G+A  +G   T+C++ D  V+++G   +G+LG GG     +P  +
Sbjct: 2440 LKPKLVEALQGHRVVGIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKI 2499

Query: 399  DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGC 457
            D  SL  +    V CG++ +  +   G V+ WG   Y +LG G       P QV  ++G 
Sbjct: 2500 D--SLTGLGVVRVECGSQFSVALTKAGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGK 2557

Query: 458  VPRNVACGWWH 468
                +A G  H
Sbjct: 2558 KAIAIATGSLH 2568



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 84/303 (27%), Positives = 129/303 (42%), Gaps = 80/303 (26%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GGRH  AL+  G+V+ WG G +G+LG  SR+     P  I  +++   +D  
Sbjct: 1352 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRD-- 1408

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                    IACG  HSA +T +G L T+G G YG+ G G T  +
Sbjct: 1409 ------------------------IACGSSHSAALTSSGELYTWGLGEYGRLGHGDTTTQ 1444

Query: 341  LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V  LLG ++  VA G     T+ ++ +G V+++G   FG+LG GG +   +P+ +
Sbjct: 1445 LKPKMVKVLLGHRVVQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNI 1504

Query: 399  DAPSLE------------------------------------NVHSKS------------ 410
            +  + +                                    +VH +             
Sbjct: 1505 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI 1564

Query: 411  --VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWW 467
              V+ GA H   + D G+V+ WG N +GQ G G       P+ V  +EG     VACG  
Sbjct: 1565 VHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 1624

Query: 468  HTL 470
            H++
Sbjct: 1625 HSV 1627



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 135/302 (44%), Gaps = 41/302 (13%)

Query: 205  DENLSAF--PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMV 262
            +E+L+A   P        + +  VA G +   A++  G+V+  G    G+LGLG     V
Sbjct: 1279 EEDLAAIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTV 1338

Query: 263  SSPHPIPCIES---------SYGKDRSAALSRGSVNSEGPG------------------- 294
              P  +  + S         S G+  +A    G V S G G                   
Sbjct: 1339 PLPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 1398

Query: 295  FRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQI 354
              +    ++ IACG  HSA +T +G L T+G G YG+ G G T  +L P  V  LLG ++
Sbjct: 1399 EALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDTTTQLKPKMVKVLLGHRV 1458

Query: 355  EGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSK--- 409
              VA G     T+ ++ +G V+++G   FG+LG GG +   +P+     ++E ++ +   
Sbjct: 1459 VQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ-----NIERLNGQGVC 1513

Query: 410  SVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWH 468
             + CGA+ +  +   G V+ WG   Y +LG G  +    P  V  + G    +VA G  H
Sbjct: 1514 QIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALH 1573

Query: 469  TL 470
             L
Sbjct: 1574 CL 1575



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 113/263 (42%), Gaps = 45/263 (17%)

Query: 220  GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG-------LGSRIRMVSSPHPIPCIE 272
            G+ +  VAAGG H+  ++  G ++ WG G  G+LG       L  ++      H +  I 
Sbjct: 2398 GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVGIA 2457

Query: 273  SSYGKDRSAALS------------RGSVNSEGP-GFRVPGNY-------VKGIACGGRHS 312
               G  ++  L+             G +   G  G +VP          V  + CG + S
Sbjct: 2458 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVRVECGSQFS 2517

Query: 313  AVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGD 372
              +T AGA+ T+G G Y + G GS D    P  V  L G +   +A G  H +C + DG+
Sbjct: 2518 VALTKAGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKAIAIATGSLHCVCCTEDGE 2577

Query: 373  VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGW 432
            VY +G N  GQLG G   A   PRL+ A  L+      V+CG+ HT           W  
Sbjct: 2578 VYTWGDNDEGQLGDGTTNAIQRPRLVAA--LQGKKVNRVACGSAHT---------LAWST 2626

Query: 433  NKYGQLGLGDVIDRNIPSQVTIE 455
            +K    G        +P+QV +E
Sbjct: 2627 SKPASAG-------KLPAQVPME 2642



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 150/356 (42%), Gaps = 63/356 (17%)

Query: 99   SIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQ 158
            ++V+ A G     AVT  G+VY  G      +GR+   LS+GT        RQ + L+  
Sbjct: 1298 NVVQVAGGSKSLFAVTVEGKVYACGE---ATNGRLGLGLSSGTV----PLPRQVTALSSY 1350

Query: 159  VSPRSQVSRSSGG---TSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAF 211
            V    +V+  SGG   T+   DG+    G G++G         K    S  + D+     
Sbjct: 1351 VV--KKVAVHSGGRHATALTVDGKVFSWGEGDDG---------KLGHFSRMNCDK----- 1394

Query: 212  PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG----------------L 255
            P L+      RI  +A G  H+ AL+  G+++ WG G  G+LG                L
Sbjct: 1395 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDTTTQLKPKMVKVLL 1454

Query: 256  GSRIRMVS----SPHPIPCIES----SYGKDRSAALSRGSVNSEGPGF-----RVPGNYV 302
            G R+  V+        +   +     S+G      L RG   SEG        R+ G  V
Sbjct: 1455 GHRVVQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG--GSEGCNIPQNIERLNGQGV 1512

Query: 303  KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
              I CG + S  +T +G + T+G G Y + G GS      P  V  L G +I  VA G  
Sbjct: 1513 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGAL 1572

Query: 363  HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
            H + ++  G VYA+G N  GQ G G       P L+    LE      V+CG+ H+
Sbjct: 1573 HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHS 1626



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 124/270 (45%), Gaps = 46/270 (17%)

Query: 233  TLALSDIGQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAALSRG---- 286
            TL+    G ++GWG+   GQLG   G+++++     P PC   +    R   L  G    
Sbjct: 2253 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKV-----PTPC--EALAALRPVQLIGGEQTL 2305

Query: 287  -SVNSEGPGF-------------------------RVPGNYVKGIAC--GGRHSAVITDA 318
             +V ++G  +                          +   ++K +A   GG+H   ++  
Sbjct: 2306 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 2365

Query: 319  GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            G + ++G    G+ G GS      P  + SL GI++  VAAG  H+ C+++ GD+Y +G 
Sbjct: 2366 GEVYSWGEAEDGKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGK 2425

Query: 379  NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGA--RHTAVIADDGKVFCWGWNKYG 436
             ++G+LG    + +  P+L++A  L+      ++CG+    T  + DD  V+ WG   YG
Sbjct: 2426 GRYGRLGHSDSEDQLKPKLVEA--LQGHRVVGIACGSGDAQTLCLTDDDTVWSWGDGDYG 2483

Query: 437  QLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
            +LG G      +P ++ ++ G     V CG
Sbjct: 2484 KLGRGGSDGCKVPMKIDSLTGLGVVRVECG 2513



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 90/343 (26%), Positives = 133/343 (38%), Gaps = 56/343 (16%)

Query: 24   LPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSG 83
            LP++   LS  VV+         +     G   A A++   K+ +WG  DD G+    S 
Sbjct: 1340 LPRQVTALSSYVVK---------KVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSR 1389

Query: 84   KHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGL 143
             + + P          I   A G +H  A+T  GE+YTWG  E    GR  G   T T L
Sbjct: 1390 MNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE---YGR-LGHGDTTTQL 1445

Query: 144  DKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGR-GSGEEGSKRRRISLAKQTAESSS 202
               + +        QV+  S+ +++   T  G     G G+ G   R             
Sbjct: 1446 KPKMVKVLLGHRVVQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR------------- 1492

Query: 203  SGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMV 262
             G E  +    +  LN G  +  +  G + +LAL+  G VW WG G   +LG GS +  V
Sbjct: 1493 GGSEGCNIPQNIERLN-GQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH-V 1550

Query: 263  SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL 322
              P  +                         G R  G  +  +A G  H   +TD+G + 
Sbjct: 1551 RKPQVVE------------------------GLR--GKKIVHVAVGALHCLAVTDSGQVY 1584

Query: 323  TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTI 365
             +G   +GQ G G+T     P  V  L G +I  VA G  H++
Sbjct: 1585 AWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 1627



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 84/349 (24%), Positives = 128/349 (36%), Gaps = 69/349 (19%)

Query: 58   MAISDSRKLITWGSTDD--LGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTE 115
            +A+S   ++ +WG  +D  LG    +      + E         +V  AAG AH   VT 
Sbjct: 2360 LALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIESL---RGIEVVDVAAGGAHSACVTA 2416

Query: 116  GGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG---- 171
             G++YTWG       GR +G L        D  ++    L E +     V  + G     
Sbjct: 2417 AGDLYTWG------KGR-YGRLG-----HSDSEDQLKPKLVEALQGHRVVGIACGSGDAQ 2464

Query: 172  TSSGTDGR-----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATV 226
            T   TD       G G+ G   R              G  +    P  +    G+ +  V
Sbjct: 2465 TLCLTDDDTVWSWGDGDYGKLGR--------------GGSDGCKVPMKIDSLTGLGVVRV 2510

Query: 227  AAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRG 286
              G + ++AL+  G V+ WG G   +LG GS    V  P  +  ++              
Sbjct: 2511 ECGSQFSVALTKAGAVYTWGKGDYHRLGHGSD-DHVRRPRQVQGLQ-------------- 2555

Query: 287  SVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCV 346
                        G     IA G  H    T+ G + T+G    GQ G G+T+    P  V
Sbjct: 2556 ------------GKKAIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 2603

Query: 347  SSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLP 395
            ++L G ++  VA G  HT+  S+     A  G    Q+    +  + LP
Sbjct: 2604 AALQGKKVNRVACGSAHTLAWSTSKP--ASAGKLPAQVPMEYNHLQELP 2650



 Score = 39.7 bits (91), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 71/149 (47%), Gaps = 3/149 (2%)

Query: 324  FGWGL--YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
            +GWG    GQ G         P    +L  ++   +  G      +++DG +YA G    
Sbjct: 2263 YGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGYGAG 2322

Query: 382  GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
            G+LG GG ++ + P LL++     +   +V+ G +H   ++ +G+V+ WG  + G+LG G
Sbjct: 2323 GRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG 2382

Query: 442  DVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
                 + P  + ++ G    +VA G  H+
Sbjct: 2383 SRSPCDRPRVIESLRGIEVVDVAAGGAHS 2411



 Score = 38.1 bits (87), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 33/73 (45%), Gaps = 5/73 (6%)

Query: 53   GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
            G  F++A++ +  + TWG  D   LG     S  H   P           +  A G  HC
Sbjct: 2513 GSQFSVALTKAGAVYTWGKGDYHRLGHG---SDDHVRRPRQVQGLQGKKAIAIATGSLHC 2569

Query: 111  VAVTEGGEVYTWG 123
            V  TE GEVYTWG
Sbjct: 2570 VCCTEDGEVYTWG 2582


>gi|449442447|ref|XP_004138993.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101222790 [Cucumis sativus]
          Length = 982

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 64/171 (37%), Positives = 96/171 (56%), Gaps = 4/171 (2%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V GIACGGRH+ ++T  G + ++G    G+ G G   D   P  + +L G  +E VA G 
Sbjct: 292 VHGIACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEADVSHPKIIDTLSGTNVELVACGE 351

Query: 362 WHTICISSDGDVYAFGG--NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
           +HT  ++  GD+Y +G   + +G LG G + +  +P+ +    +E +    +SCGA HTA
Sbjct: 352 YHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVGG-QMEGIRVSYISCGAWHTA 410

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
           V+   G++F +G   +G LG GD I  N P +V T+ G     VACG WHT
Sbjct: 411 VVTSAGQLFTFGDGSFGALGHGDHITSNFPREVETLRGLRTTKVACGVWHT 461



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 79/271 (29%), Positives = 128/271 (47%), Gaps = 45/271 (16%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G+R++ ++ G  HT  ++  GQ++ +G G  G LG G  I   +S  P           R
Sbjct: 396 GIRVSYISCGAWHTAVVTSAGQLFTFGDGSFGALGHGDHI---TSNFP-----------R 441

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAV-------ITDAGA--------LLTF 324
                RG   ++             +ACG  H+A        ++D+G         L T+
Sbjct: 442 EVETLRGLRTTK-------------VACGVWHTAAAVEAINELSDSGTSASPSSRKLYTW 488

Query: 325 GWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQL 384
           G G  G+ G G  +  L P CV++L+  +I  VA G   T+ +++ G VY  G   +GQL
Sbjct: 489 GDGDKGRLGHGDNEPRLVPECVAALIEERICQVACGNDLTVALTTAGRVYTMGSTAYGQL 548

Query: 385 GTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVI 444
           G+     + LP  ++   + N   + V+CG+ H AV+    +V+ WG    GQLG GD  
Sbjct: 549 GSATANGK-LPTCVEG-EIANSFVEEVACGSYHVAVLTSKNEVYTWGKGLNGQLGHGDNN 606

Query: 445 DRNIPSQV-TIEGCVPRNVACGWWHTLLLAV 474
            RN P+ V  ++    +NVACG   T+++ +
Sbjct: 607 HRNTPTIVDVLKDKQVKNVACGSKFTVVICI 637



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/234 (29%), Positives = 104/234 (44%), Gaps = 46/234 (19%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLA-------LSDIG--------QVWGWGYG 248
           GD   S FP  V    G+R   VA G  HT A       LSD G        +++ WG G
Sbjct: 432 GDHITSNFPREVETLRGLRTTKVACGVWHTAAAVEAINELSDSGTSASPSSRKLYTWGDG 491

Query: 249 GEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACG 308
            +G+LG G      + P  +P   ++  ++R                      +  +ACG
Sbjct: 492 DKGRLGHGD-----NEPRLVPECVAALIEER----------------------ICQVACG 524

Query: 309 GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVS-SLLGIQIEGVAAGLWHTICI 367
              +  +T AG + T G   YGQ G  + + +L P CV   +    +E VA G +H   +
Sbjct: 525 NDLTVALTTAGRVYTMGSTAYGQLGSATANGKL-PTCVEGEIANSFVEEVACGSYHVAVL 583

Query: 368 SSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
           +S  +VY +G    GQLG G +     P ++D   L++   K+V+CG++ T VI
Sbjct: 584 TSKNEVYTWGKGLNGQLGHGDNNHRNTPTIVDV--LKDKQVKNVACGSKFTVVI 635


>gi|356567509|ref|XP_003551961.1| PREDICTED: uncharacterized protein LOC100791947 [Glycine max]
          Length = 1106

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 62/171 (36%), Positives = 97/171 (56%), Gaps = 4/171 (2%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ IACGG+H+A++T  G + ++G    G+ G G   D   P  + SL    IE VA G 
Sbjct: 314 VQNIACGGKHAALVTKQGEVFSWGEESGGRLGHGVDSDVPHPKLIESLSNTNIELVACGE 373

Query: 362 WHTICISSDGDVYAFGG--NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
           +HT  ++  GD+Y +G     +G LG G   +  +P+ ++ P LE +H  S+SCG  HTA
Sbjct: 374 YHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNGP-LEGIHVSSISCGPWHTA 432

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
           V+   G++F +G   +G LG GD    ++P ++ +++G      ACG WHT
Sbjct: 433 VVTSSGQLFTFGDGTFGALGHGDRKSVSLPREIESLKGLRTVQAACGVWHT 483



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/267 (29%), Positives = 124/267 (46%), Gaps = 46/267 (17%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  +A GG+H   ++  G+V+ WG    G+LG G    +   PHP   IES         
Sbjct: 314 VQNIACGGKHAALVTKQGEVFSWGEESGGRLGHGVDSDV---PHP-KLIES--------- 360

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTDDE 340
                         +    ++ +ACG  H+  +T +G L T+G G   YG  G G+    
Sbjct: 361 --------------LSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSH 406

Query: 341 LSPNCVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLD 399
             P  V+  L GI +  ++ G WHT  ++S G ++ FG   FG LG G  ++ +LPR ++
Sbjct: 407 WVPKRVNGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGALGHGDRKSVSLPREIE 466

Query: 400 APSLENVHSKSVSCGARHTAVIAD------------DGKVFCWGWNKYGQLGLGDVIDRN 447
             SL+ + +   +CG  HTA + +             GK+F WG    G+LG GD   + 
Sbjct: 467 --SLKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKL 524

Query: 448 IPSQVTIEGCVPRNVACGWWHTLLLAV 474
           +P+ V         VACG  H++ +A+
Sbjct: 525 VPTCVVTLVEPNCQVACG--HSMTVAL 549



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/260 (30%), Positives = 120/260 (46%), Gaps = 45/260 (17%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G+ +++++ G  HT  ++  GQ++ +G G  G LG G R + VS P  I  ++       
Sbjct: 418 GIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGALGHGDR-KSVSLPREIESLK------- 469

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDA------------GALLTFGWG 327
                         G R         ACG  H+A + +             G L T+G G
Sbjct: 470 --------------GLRTVQ-----AACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDG 510

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG 387
             G+ G G  + +L P CV +L+    + VA G   T+ +S  G VY  G   +GQLG  
Sbjct: 511 DKGRLGHGDKESKLVPTCVVTLVEPNCQ-VACGHSMTVALSRSGHVYTMGSCVYGQLGN- 568

Query: 388 GDQAE-TLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR 446
             QA+  LP  ++   L     + ++CGA H AV+    +VF WG    G+LG GD  DR
Sbjct: 569 -TQADGKLPIRVEG-KLSKSFVEEIACGAYHVAVLTSRTEVFTWGKGANGRLGHGDTNDR 626

Query: 447 NIPSQV-TIEGCVPRNVACG 465
           N P+ V  ++    +++ACG
Sbjct: 627 NTPTLVEALKDKQVKSIACG 646



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 123/279 (44%), Gaps = 50/279 (17%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYG--GEGQLGLGSRIRMVSSPHPIP 269
           P L+       I  VA G  HT A++  G ++ WG G    G LG G+++      H +P
Sbjct: 355 PKLIESLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQV-----SHWVP 409

Query: 270 CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
                             VN  GP   + G +V  I+CG  H+AV+T +G L TFG G +
Sbjct: 410 ----------------KRVN--GP---LEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTF 448

Query: 330 GQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI------------SSDGDVYAFG 377
           G  G G       P  + SL G++    A G+WHT  +             S G ++ +G
Sbjct: 449 GALGHGDRKSVSLPREIESLKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 508

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQ 437
               G+LG G  +++ +P  +      N     V+CG   T  ++  G V+  G   YGQ
Sbjct: 509 DGDKGRLGHGDKESKLVPTCVVTLVEPNCQ---VACGHSMTVALSRSGHVYTMGSCVYGQ 565

Query: 438 LGLGDVIDRNIPSQVTIEGCVPRN----VACGWWHTLLL 472
           LG     D  +P  + +EG + ++    +ACG +H  +L
Sbjct: 566 LG-NTQADGKLP--IRVEGKLSKSFVEEIACGAYHVAVL 601


>gi|168050967|ref|XP_001777928.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162670688|gb|EDQ57252.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 364

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 93/274 (33%), Positives = 128/274 (46%), Gaps = 36/274 (13%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
           GD +    P  ++   G  I  +AA   HT  L+D G+V+  G    GQLG+      V 
Sbjct: 18  GDYSDHPTPTSLSTLVGKDIVHIAASDYHTAFLTDEGEVYTTGSNDAGQLGVRGMEEQVV 77

Query: 264 SPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLT 323
              PI          R AAL                + V  IACG +H+  +T+ GAL +
Sbjct: 78  ---PI----------RVAALDT--------------HMVTHIACGFKHTVAVTETGALAS 110

Query: 324 FGWGLYGQCG--QGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
           +G   YGQ G   G+  D + P  V     +    VAAG +HT+ ++  GDVY+FG    
Sbjct: 111 WGGDEYGQLGFDSGNIVDGVQPRIVKGSRDLHFSRVAAGGYHTLALTGSGDVYSFGDGSS 170

Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
           G LG G     + P L+   SL  +    ++CG  H+A +  DGKVF WG  KYGQLG G
Sbjct: 171 GALGHGNLDGCSTPSLV--KSLWGLGVTQIACGENHSAALTVDGKVFTWGRGKYGQLGHG 228

Query: 442 DVIDRNIPSQVTIEGCVPRNV---ACGWWHTLLL 472
               +NI   V ++  V  +V   ACG  HTL +
Sbjct: 229 ST--QNIKLPVAVKALVDHDVIQIACGGDHTLAI 260



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 120/403 (29%), Positives = 175/403 (43%), Gaps = 66/403 (16%)

Query: 74  DLGQSYVTSGKHGEIPEPFPLPTEA--SIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSG 131
           DLGQ  +  G + + P P  L T     IV  AA   H   +T+ GEVYT G  +     
Sbjct: 11  DLGQLGI--GDYSDHPTPTSLSTLVGKDIVHIAASDYHTAFLTDEGEVYTTGSNDA---- 64

Query: 132 RVFGDLSTGTGLDKDVFE-RQSSFLTEQVSP-----RSQVSRSSGGTSSGTDGRGSGEEG 185
              G L    G+++ V   R ++  T  V+      +  V+ +  G  +   G   G+ G
Sbjct: 65  ---GQLGV-RGMEEQVVPIRVAALDTHMVTHIACGFKHTVAVTETGALASWGGDEYGQLG 120

Query: 186 SKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGW 245
                I    Q               P +V  +  +  + VAAGG HTLAL+  G V+ +
Sbjct: 121 FDSGNIVDGVQ---------------PRIVKGSRDLHFSRVAAGGYHTLALTGSGDVYSF 165

Query: 246 GYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGI 305
           G G  G LG G+ +   S+P     ++S +G                         V  I
Sbjct: 166 GDGSSGALGHGN-LDGCSTP---SLVKSLWGLG-----------------------VTQI 198

Query: 306 ACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTI 365
           ACG  HSA +T  G + T+G G YGQ G GST +   P  V +L+   +  +A G  HT+
Sbjct: 199 ACGENHSAALTVDGKVFTWGRGKYGQLGHGSTQNIKLPVAVKALVDHDVIQIACGGDHTL 258

Query: 366 CISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDG 425
            I+SDG ++++G   +GQ G G  +    P+      LE      VS GARHT V+ D G
Sbjct: 259 AITSDGRLFSWGHGLWGQTGHGTKEDVLSPK--QVHQLEGRVLVQVSAGARHTVVLLDRG 316

Query: 426 KVFCWGWNKYGQLGLGDVIDRNIPSQVTIE----GCVPRNVAC 464
           +V+ WG  +  QLG  D  D +    + +      CV  N +C
Sbjct: 317 EVYGWGDCEQRQLGTCDRCDFSTYGHICVSLCRCECVLMNTSC 359



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 96/334 (28%), Positives = 145/334 (43%), Gaps = 59/334 (17%)

Query: 60  ISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEV 119
           ++D  ++ T GS +D GQ  V   +   +P          +   A G+ H VAVTE G +
Sbjct: 50  LTDEGEVYTTGS-NDAGQLGVRGMEEQVVPIRVAALDTHMVTHIACGFKHTVAVTETGAL 108

Query: 120 YTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRS-------QVSRSSGGT 172
            +WG  E       +G L    G D       S  + + V PR          SR + G 
Sbjct: 109 ASWGGDE-------YGQL----GFD-------SGNIVDGVQPRIVKGSRDLHFSRVAAGG 150

Query: 173 SSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRH 232
                  GSG+        S    ++ +   G+ +  + P LV    G+ +  +A G  H
Sbjct: 151 YHTLALTGSGD------VYSFGDGSSGALGHGNLDGCSTPSLVKSLWGLGVTQIACGENH 204

Query: 233 TLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEG 292
           + AL+  G+V+ WG G  GQLG GS  + +  P  +  +                     
Sbjct: 205 SAALTVDGKVFTWGRGKYGQLGHGS-TQNIKLPVAVKAL--------------------- 242

Query: 293 PGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGI 352
               V  + ++ IACGG H+  IT  G L ++G GL+GQ G G+ +D LSP  V  L G 
Sbjct: 243 ----VDHDVIQ-IACGGDHTLAITSDGRLFSWGHGLWGQTGHGTKEDVLSPKQVHQLEGR 297

Query: 353 QIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
            +  V+AG  HT+ +   G+VY +G  +  QLGT
Sbjct: 298 VLVQVSAGARHTVVLLDRGEVYGWGDCEQRQLGT 331



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 52/156 (33%), Positives = 81/156 (51%), Gaps = 5/156 (3%)

Query: 320 ALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN 379
           A+   G G  GQ G G   D  +P  +S+L+G  I  +AA  +HT  ++ +G+VY  G N
Sbjct: 3   AVYALGRGDLGQLGIGDYSDHPTPTSLSTLVGKDIVHIAASDYHTAFLTDEGEVYTTGSN 62

Query: 380 QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG 439
             GQLG  G + + +P  +   +L+      ++CG +HT  + + G +  WG ++YGQLG
Sbjct: 63  DAGQLGVRGMEEQVVP--IRVAALDTHMVTHIACGFKHTVAVTETGALASWGGDEYGQLG 120

Query: 440 L--GDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
              G+++D   P  V          VA G +HTL L
Sbjct: 121 FDSGNIVDGVQPRIVKGSRDLHFSRVAAGGYHTLAL 156



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 107/237 (45%), Gaps = 34/237 (14%)

Query: 242 VWGWGYGGEGQLGLGSRIRMVSSPHPIPC-IESSYGKDRSAALSRGSVNSEGPGFRVPGN 300
           V+  G G  GQLG+G       S HP P  + +  GKD                      
Sbjct: 4   VYALGRGDLGQLGIGDY-----SDHPTPTSLSTLVGKD---------------------- 36

Query: 301 YVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAG 360
            +  IA    H+A +TD G + T G    GQ G    ++++ P  V++L    +  +A G
Sbjct: 37  -IVHIAASDYHTAFLTDEGEVYTTGSNDAGQLGVRGMEEQVVPIRVAALDTHMVTHIACG 95

Query: 361 LWHTICISSDGDVYAFGGNQFGQLG--TGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
             HT+ ++  G + ++GG+++GQLG  +G       PR++      ++H   V+ G  HT
Sbjct: 96  FKHTVAVTETGALASWGGDEYGQLGFDSGNIVDGVQPRIVKGS--RDLHFSRVAAGGYHT 153

Query: 419 AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLAV 474
             +   G V+ +G    G LG G++   + PS V ++ G     +ACG  H+  L V
Sbjct: 154 LALTGSGDVYSFGDGSSGALGHGNLDGCSTPSLVKSLWGLGVTQIACGENHSAALTV 210


>gi|449435362|ref|XP_004135464.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
           sativus]
          Length = 608

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 115/407 (28%), Positives = 172/407 (42%), Gaps = 70/407 (17%)

Query: 64  RKLITWGSTDD--LGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYT 121
           ++L +WG+  D  LG   +      ++     L +  +I   + G AH +A+T GG V T
Sbjct: 228 QELWSWGAGTDAQLGTGRLEDNNLPQLVRTPSLSSAPAISFLSCGGAHVIALTAGGGVLT 287

Query: 122 WGWKECVPSGRV-FGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRG 180
           WG      SG++  GD+ +     K V    S F+T   +  S     S      T G G
Sbjct: 288 WGRGN---SGQLGLGDMISSLH-PKPVMRLGSYFITHVSAGWSHSGFVSDEGKLYTCGDG 343

Query: 181 S-GEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLAL--- 236
           S G+ G                  GD  L  FP  V       +  +A G RH+LAL   
Sbjct: 344 SFGQLGH-----------------GDYQLRCFPEEVLFFSDKHVDKIACGMRHSLALVKG 386

Query: 237 SDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFR 296
           S   QV+G+G G  GQLG+  +I+ V+    +P + S+                      
Sbjct: 387 SSGEQVYGFGAGKRGQLGISKKIQTVN----LPILSSN---------------------- 420

Query: 297 VPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG 356
           +    + GIA GG HSA ++  G L T+G G        ST D  SP  + S        
Sbjct: 421 LEAAEIVGIAAGGDHSAALSAEGHLYTWGRGF------KSTSDVYSPQHLPS--PSSFSK 472

Query: 357 VAAGLWHTICISSDGDVYAFGGNQFGQLGTGG--DQAETLP------RLLDAPSLENVHS 408
           VA G  H + ++ +G++Y  GG   G L      +  ++LP           P+L  +  
Sbjct: 473 VALGWNHALVLTDEGELYMLGGKHHGALSDSEMLNSMKSLPGDSREDNFQAVPALSGIKV 532

Query: 409 KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
             ++ GA H+ ++ +DG V  WGW ++GQLGLGD  D   P  V + 
Sbjct: 533 LDIAAGAEHSVIVTEDGGVKTWGWGEHGQLGLGDTCDHTNPQTVNLN 579



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 111/255 (43%), Gaps = 37/255 (14%)

Query: 206 ENLSAF---PCLVTLNPGVRIA---TVAAGGRHTLALSDIGQ-VWGWGYGGEGQLGLGSR 258
           +++S F   P L  L    R +   T++  G   + + D+ Q +W WG G + QLG G R
Sbjct: 187 DDISCFDLCPLLYELLQEYRASSKETMSMVGLREVVVDDVEQELWSWGAGTDAQLGTG-R 245

Query: 259 IRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDA 318
           +   + P  +          R+ +LS                 +  ++CGG H   +T  
Sbjct: 246 LEDNNLPQLV----------RTPSLSSAPA-------------ISFLSCGGAHVIALTAG 282

Query: 319 GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           G +LT+G G  GQ G G     L P  V  L    I  V+AG  H+  +S +G +Y  G 
Sbjct: 283 GGVLTWGRGNSGQLGLGDMISSLHPKPVMRLGSYFITHVSAGWSHSGFVSDEGKLYTCGD 342

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDG---KVFCWGWNKY 435
             FGQLG G  Q    P   +     + H   ++CG RH+  +       +V+ +G  K 
Sbjct: 343 GSFGQLGHGDYQLRCFPE--EVLFFSDKHVDKIACGMRHSLALVKGSSGEQVYGFGAGKR 400

Query: 436 GQLGLGDVIDR-NIP 449
           GQLG+   I   N+P
Sbjct: 401 GQLGISKKIQTVNLP 415



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 92/368 (25%), Positives = 142/368 (38%), Gaps = 75/368 (20%)

Query: 33  PLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWG--STDDLGQSYVTSGKHGEIPE 90
           P +VR P    +        G    +A++    ++TWG  ++  LG   + S  H   P+
Sbjct: 252 PQLVRTPSLSSAPAISFLSCGGAHVIALTAGGGVLTWGRGNSGQLGLGDMISSLH---PK 308

Query: 91  PFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFER 150
           P        I   +AGW+H   V++ G++YT G          FG L  G    +   E 
Sbjct: 309 PVMRLGSYFITHVSAGWSHSGFVSDEGKLYTCG-------DGSFGQLGHGDYQLRCFPEE 361

Query: 151 QSSFLTEQVSP-----RSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGD 205
              F  + V       R  ++   G +     G G+G    KR ++ ++K+    +    
Sbjct: 362 VLFFSDKHVDKIACGMRHSLALVKGSSGEQVYGFGAG----KRGQLGISKKIQTVN---- 413

Query: 206 ENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSP 265
                 P L +      I  +AAGG H+ ALS  G ++ WG G +           V SP
Sbjct: 414 -----LPILSSNLEAAEIVGIAAGGDHSAALSAEGHLYTWGRGFKS-------TSDVYSP 461

Query: 266 HPIPCIESSY-----------------------GKDRSAALSRGSVNSEG--PGFRVPGN 300
             +P   SS+                       GK   A      +NS    PG     N
Sbjct: 462 QHLPS-PSSFSKVALGWNHALVLTDEGELYMLGGKHHGALSDSEMLNSMKSLPGDSREDN 520

Query: 301 Y----------VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLL 350
           +          V  IA G  HS ++T+ G + T+GWG +GQ G G T D  +P  V+  L
Sbjct: 521 FQAVPALSGIKVLDIAAGAEHSVIVTEDGGVKTWGWGEHGQLGLGDTCDHTNPQTVN--L 578

Query: 351 GIQIEGVA 358
            +++E  A
Sbjct: 579 NLKLESTA 586


>gi|260802292|ref|XP_002596026.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
 gi|229281280|gb|EEN52038.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
          Length = 1015

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 103/373 (27%), Positives = 158/373 (42%), Gaps = 58/373 (15%)

Query: 89  PEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDL--STGTGLDKD 146
           P+  P     ++ + + G  H V V   G VYT G  +    G+  G    +  T LD  
Sbjct: 25  PKEQPFGATKAMREVSCGRQHTVFVLAEGTVYTCGSNDYGQLGQDKGHKRPTVITALDTQ 84

Query: 147 VFERQS--SFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSG 204
             ++ S   +    V+ + QV  S G    G  G      G+  RR  + K+ +      
Sbjct: 85  SIQQVSCGDYHNLVVNDKYQVF-SWGYDDCGQLGHTLEAGGNNSRRPRMVKELS------ 137

Query: 205 DENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSS 264
                           ++I  VA GG+H+LALS+ G+++ WG    GQLG+GS     + 
Sbjct: 138 ---------------SLQIVQVACGGKHSLALSNDGRIFSWGNNSHGQLGIGS-----TK 177

Query: 265 PHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTF 324
             P P   +S                      + G     I  GG HS V++ +GA+  F
Sbjct: 178 NQPKPQELTS----------------------LTGIPFCQIVAGGSHSFVLSKSGAVFGF 215

Query: 325 GWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQL 384
           G   +GQ G G T D   P  V SL  +++  ++ G  HT  ++ DG V  FG   +GQL
Sbjct: 216 GRNTFGQLGLGDTGDRKYPTHVKSLRSLKVTHISCGEEHTAVLTLDGGVLTFGAGSYGQL 275

Query: 385 GTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLGLGDV 443
           G   +  E LPR      L  +    ++CG  HT A +   G+++ +G    GQLG    
Sbjct: 276 GHNSNNHEALPR--KVFELMGLEVTQLACGRMHTMAYVESSGRIYSFGLGGNGQLGSKGT 333

Query: 444 IDRNIPSQVTIEG 456
            + N P  +T++G
Sbjct: 334 TNCNTP--ITVDG 344



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 95/177 (53%), Gaps = 10/177 (5%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           ++ ++CG +H+  +   G + T G   YGQ GQ        P  +++L    I+ V+ G 
Sbjct: 36  MREVSCGRQHTVFVLAEGTVYTCGSNDYGQLGQDKGHKR--PTVITALDTQSIQQVSCGD 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLG----TGGDQAETLPRLLDAPSLENVHSKSVSCGARH 417
           +H + ++    V+++G +  GQLG     GG+ +   PR++    L ++    V+CG +H
Sbjct: 94  YHNLVVNDKYQVFSWGYDDCGQLGHTLEAGGNNSRR-PRMVK--ELSSLQIVQVACGGKH 150

Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPR-NVACGWWHTLLLA 473
           +  +++DG++F WG N +GQLG+G   ++  P ++T    +P   +  G  H+ +L+
Sbjct: 151 SLALSNDGRIFSWGNNSHGQLGIGSTKNQPKPQELTSLTGIPFCQIVAGGSHSFVLS 207



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 65/292 (22%), Positives = 110/292 (37%), Gaps = 49/292 (16%)

Query: 58  MAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTE 115
           + ++D  ++ +WG  D   LG +    G +   P      +   IV+ A G  H +A++ 
Sbjct: 97  LVVNDKYQVFSWGYDDCGQLGHTLEAGGNNSRRPRMVKELSSLQIVQVACGGKHSLALSN 156

Query: 116 GGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSG 175
            G +++WG           G L  G+  ++   +  +S       P  Q+   +GG+ S 
Sbjct: 157 DGRIFSWG-------NNSHGQLGIGSTKNQPKPQELTSLTG---IPFCQIV--AGGSHSF 204

Query: 176 TDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLA 235
              +     G         + T      GD     +P  V     +++  ++ G  HT  
Sbjct: 205 VLSKSGAVFG-------FGRNTFGQLGLGDTGDRKYPTHVKSLRSLKVTHISCGEEHTAV 257

Query: 236 LSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF 295
           L+  G V  +G G  GQLG                    +  +   AL R         F
Sbjct: 258 LTLDGGVLTFGAGSYGQLG--------------------HNSNNHEALPRKV-------F 290

Query: 296 RVPGNYVKGIACGGRHS-AVITDAGALLTFGWGLYGQCGQGSTDDELSPNCV 346
            + G  V  +ACG  H+ A +  +G + +FG G  GQ G   T +  +P  V
Sbjct: 291 ELMGLEVTQLACGRMHTMAYVESSGRIYSFGLGGNGQLGSKGTTNCNTPITV 342



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 3/101 (2%)

Query: 373 VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGW 432
           ++ +G  + G+LG GG + + +    + P       + VSCG +HT  +  +G V+  G 
Sbjct: 1   MFCWGAARNGELGLGGIEEDVILAPKEQPFGATKAMREVSCGRQHTVFVLAEGTVYTCGS 60

Query: 433 NKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
           N YGQLG      R  P+ +T ++    + V+CG +H L++
Sbjct: 61  NDYGQLGQDKGHKR--PTVITALDTQSIQQVSCGDYHNLVV 99


>gi|366163660|ref|ZP_09463415.1| YD repeat protein [Acetivibrio cellulolyticus CD2]
          Length = 2438

 Score =  112 bits (280), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 84/257 (32%), Positives = 120/257 (46%), Gaps = 39/257 (15%)

Query: 216 TLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSY 275
           T NP    A + AGG+ TLAL++ G V  WG    GQLGLG+ +               Y
Sbjct: 609 TTNP----AQIEAGGKFTLALANDGSVKVWGNNDYGQLGLGNTLE--------------Y 650

Query: 276 GKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG 335
            K  +            P  R    Y+K +  G  H+  + + G +  +G   YGQ G G
Sbjct: 651 KKIATI-----------PDLR----YIKQLDAGTDHAVALLNDGTVKVWGKNDYGQLGLG 695

Query: 336 STDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLP 395
             D   SP  V  L G++   +AAG   T+ +  DG V  +G N +GQL    D  + + 
Sbjct: 696 DLDKRTSPTKVEGLSGVK--QIAAGQDFTLVLMEDGTVKGWGSNDYGQLCKPSD-VKIVK 752

Query: 396 RLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
             +D P L +V  K ++ G      I ++G V  WG N YGQLGLGD ++R+ P+QVT  
Sbjct: 753 TPIDLPQLSDV--KEIAVGGNCAFAILNNGTVKAWGDNDYGQLGLGDKLERSTPTQVTGL 810

Query: 456 GCVPRNVACGWWHTLLL 472
             V +   C W + + L
Sbjct: 811 SSVKKISVC-WSNAIAL 826



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 100/416 (24%), Positives = 157/416 (37%), Gaps = 93/416 (22%)

Query: 52  GGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCV 111
            G  F +A+++   +  WG+ +D GQ  +  G   E  +   +P    I +  AG  H V
Sbjct: 617 AGGKFTLALANDGSVKVWGN-NDYGQ--LGLGNTLEYKKIATIPDLRYIKQLDAGTDHAV 673

Query: 112 AVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG 171
           A+   G V  WG  +       +G L  G     D+ +R S    E +S   Q++     
Sbjct: 674 ALLNDGTVKVWGKND-------YGQLGLG-----DLDKRTSPTKVEGLSGVKQIAAGQDF 721

Query: 172 T----SSGT-DGRGSGEEGS--KRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           T      GT  G GS + G   K   + + K   +     D                 + 
Sbjct: 722 TLVLMEDGTVKGWGSNDYGQLCKPSDVKIVKTPIDLPQLSD-----------------VK 764

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +A GG    A+ + G V  WG    GQLGLG ++   S+P                   
Sbjct: 765 EIAVGGNCAFAILNNGTVKAWGDNDYGQLGLGDKLER-STP------------------- 804

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFG----WGLYGQCGQGSTDDE 340
                            V G++   + S   ++A ALL  G    W        G  ++ 
Sbjct: 805 ---------------TQVTGLSSVKKISVCWSNAIALLNDGTVKVW--------GHINNY 841

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
             P  V  L  ++  GV  G+++   +  DG V  +G N  G LG G  +  TLP  +D 
Sbjct: 842 TLPTSVGELKNVKQVGV--GVYNYFVLLQDGSVKGWGSNTLGSLGVGDTEQRTLPTKIDG 899

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEG 456
             +E   +K +  G  H+ V+  DG +  WG N+  +L         + + VT+EG
Sbjct: 900 --IEG--AKQLINGNAHSFVLMPDGSLKGWGNNRSYELASSSA-QYELKNPVTVEG 950



 Score = 42.7 bits (99), Expect = 0.40,   Method: Composition-based stats.
 Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 4/51 (7%)

Query: 395 PRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVID 445
           P++ DA +    +   +  G + T  +A+DG V  WG N YGQLGLG+ ++
Sbjct: 603 PQVFDATT----NPAQIEAGGKFTLALANDGSVKVWGNNDYGQLGLGNTLE 649


>gi|348542108|ref|XP_003458528.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Oreochromis
            niloticus]
          Length = 4936

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 128/290 (44%), Gaps = 79/290 (27%)

Query: 232  HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
            H++AL++ G+V+ WG G  G+LG G+  R    P  I  ++                   
Sbjct: 4168 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQ------------------- 4207

Query: 292  GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                   G  V  ++CG +HSAV+T  G L TFG G YG+ G G+T ++  P  V++L G
Sbjct: 4208 -------GEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPEKVTALEG 4260

Query: 352  IQIEGVAAGLWHTICISSDGD-VYAFGGNQFGQLGTGGDQAETLPRLLDA---------- 400
              +  VA GL HT+ +S+DG  V+AFG   +G+LG G   A++ P+ +D           
Sbjct: 4261 YHVGQVACGLNHTLVVSADGMMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVA 4320

Query: 401  ----------------------------------------PSLENVHSKSVSCGARHTAV 420
                                                    P L  +H + V+ GA HT V
Sbjct: 4321 CGTQFSVALTKDGKVFTFGQDRLIGLPEGRARNHNRPQQVPGLSGIHIQDVAVGAEHTLV 4380

Query: 421  IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            ++  G V+ WG N  GQLGLG       P+ V T++G     ++ G  H+
Sbjct: 4381 LSSTGDVYTWGSNSEGQLGLGHTNHVREPTLVTTLQGKNIHQISAGRCHS 4430



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 72/236 (30%), Positives = 116/236 (49%), Gaps = 36/236 (15%)

Query: 242  VWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNY 301
            V+ WG G  GQL    R  +V      P I  S+ +                        
Sbjct: 4074 VFLWGAGRHGQLAEAGRNILV------PTIAPSFSQ------------------------ 4103

Query: 302  VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
             + + CG   + VI   G +L  G G YG+ GQG++DD      +S+L G  +  +    
Sbjct: 4104 AQQVVCGQNCTFVIQPNGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSC 4163

Query: 362  W---HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
                H++ ++  G+V+++G   +G+LG G    +  PR ++A   E V    +SCG +H+
Sbjct: 4164 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEV--VQMSCGFKHS 4221

Query: 419  AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLA 473
            AV+  DGK+F +G   YG+LGLG+  ++ +P +VT +EG     VACG  HTL+++
Sbjct: 4222 AVVTADGKLFTFGNGDYGRLGLGNTSNKKLPEKVTALEGYHVGQVACGLNHTLVVS 4277



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 120/424 (28%), Positives = 170/424 (40%), Gaps = 84/424 (19%)

Query: 14   VFMWGY-LPGALPQR-SPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISD--------S 63
            VF+WG    G L +    IL P +     +   A + VCG  C F +  +         S
Sbjct: 4074 VFLWGAGRHGQLAEAGRNILVPTIAP---SFSQAQQVVCGQNCTFVIQPNGTVLACGEGS 4130

Query: 64   RKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
               +  G++DDL    V S   G +           +V +     H +A+TE GEV++WG
Sbjct: 4131 YGRLGQGNSDDLHVLTVISALQGFVV--------TQLVTSCGSDGHSMALTESGEVFSWG 4182

Query: 124  WKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGT---DGR- 179
              +       +G L  G   D+    RQ     E +     V  S G   S     DG+ 
Sbjct: 4183 DGD-------YGKLGHGNS-DRQRRPRQ----IEALQGEEVVQMSCGFKHSAVVTADGKL 4230

Query: 180  ---GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLAL 236
               G+G+ G    R+ L          G+ +    P  VT   G  +  VA G  HTL +
Sbjct: 4231 FTFGNGDYG----RLGL----------GNTSNKKLPEKVTALEGYHVGQVACGLNHTLVV 4276

Query: 237  SDIGQ-VWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF 295
            S  G  VW +G G  G+LGLG+     SSP  +  +                        
Sbjct: 4277 SADGMMVWAFGDGDYGKLGLGNSTAK-SSPQKVDVL------------------------ 4311

Query: 296  RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
               G  +K +ACG + S  +T  G + TFG        +G   +   P  V  L GI I+
Sbjct: 4312 --CGIGIKKVACGTQFSVALTKDGKVFTFGQDRLIGLPEGRARNHNRPQQVPGLSGIHIQ 4369

Query: 356  GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGA 415
             VA G  HT+ +SS GDVY +G N  GQLG G       P L+     +N+H   +S G 
Sbjct: 4370 DVAVGAEHTLVLSSTGDVYTWGSNSEGQLGLGHTNHVREPTLVTTLQGKNIH--QISAGR 4427

Query: 416  RHTA 419
             H+A
Sbjct: 4428 CHSA 4431



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 64/244 (26%), Positives = 119/244 (48%), Gaps = 34/244 (13%)

Query: 233 TLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEG 292
           T  +S+  +V+ WG     QL  G++ +++      P + SS+   ++            
Sbjct: 372 TPVVSETCEVYVWGSNSSHQLVEGTQEKILQ-----PKLASSFADAQT------------ 414

Query: 293 PGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGI 352
                       I  G   + VI+  G++   G G YG+ G G ++++ +   ++     
Sbjct: 415 ------------IEAGQYCTFVISSDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHR 462

Query: 353 QIEGVAAGLW---HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSK 409
            I+ V++      HT+  +++G+V+++G   +G+LG G    +  P+L+  P L+     
Sbjct: 463 AIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVV 521

Query: 410 SVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHT 469
            VS G RH+A +++DG+++ WG   +G+LG GD   RNIP+ V     V   V+CG  HT
Sbjct: 522 CVSAGYRHSAAVSEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG-EVSCGSSHT 580

Query: 470 LLLA 473
           + L+
Sbjct: 581 IALS 584



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 118/255 (46%), Gaps = 37/255 (14%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G  +  V+AG RH+ A+S+ G+++ WG G  G+LG G      S+   IP +     KD 
Sbjct: 517 GKVVVCVSAGYRHSAAVSEDGELYTWGEGDFGRLGHGD-----SNSRNIPTL----VKDI 567

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL-TFGWGLYGQCGQGSTD 338
           S                     V  ++CG  H+  ++  G  + +FG G  G+ G G T+
Sbjct: 568 SN--------------------VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTN 607

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL-PRL 397
               P  V +L G+ I  V AG   ++ ++S G VYA+G      LG G  +A  L P+L
Sbjct: 608 RVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKL 665

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVI-DRNIPSQVT-IE 455
           ++   L       +S G  H   ++ D +V+ WG N  GQ G G+       P +V  ++
Sbjct: 666 IE--ELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVIGLD 723

Query: 456 GCVPRNVACGWWHTL 470
           G   + ++ G  H+L
Sbjct: 724 GVAIQQISAGTSHSL 738



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 112/258 (43%), Gaps = 45/258 (17%)

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLG------SRIRMVSSPH-PIPCIESSYGK 277
           T+ AG   T  +S  G V   G G  G+LGLG      +  ++   PH  I  + SS G 
Sbjct: 414 TIEAGQYCTFVISSDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGS 473

Query: 278 DRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST 337
           D                                H+   T  G + ++G G YG+ G G++
Sbjct: 474 D-------------------------------GHTLAFTTEGEVFSWGDGDYGKLGHGNS 502

Query: 338 DDELSPNCVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPR 396
             +  P  +   L G  +  V+AG  H+  +S DG++Y +G   FG+LG G   +  +P 
Sbjct: 503 STQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEGDFGRLGHGDSNSRNIPT 562

Query: 397 LLDAPSLENVHSKSVSCGARHTAVIADDGK-VFCWGWNKYGQLGLGDVIDRNIPSQV-TI 454
           L+    + NV    VSCG+ HT  ++ DG+ V+ +G    G+LG GD      P  V  +
Sbjct: 563 LVK--DISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEAL 618

Query: 455 EGCVPRNVACGWWHTLLL 472
           +G   R V  G   +L L
Sbjct: 619 QGMFIRKVCAGSQSSLAL 636



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 86/324 (26%), Positives = 131/324 (40%), Gaps = 67/324 (20%)

Query: 52  GGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVK-AAAGWA 108
           G  G  +A +   ++ +WG  D   LG    ++ K+   P+    P +  +V   +AG+ 
Sbjct: 472 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY---PKLIQGPLQGKVVVCVSAGYR 528

Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRS 168
           H  AV+E GE+YTWG  +       FG L  G     D   R    L + +S   +VS  
Sbjct: 529 HSAAVSEDGELYTWGEGD-------FGRLGHG-----DSNSRNIPTLVKDISNVGEVSCG 576

Query: 169 SGGTSS-GTDGR-----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVR 222
           S  T +   DGR     G G+ G                  GD N    P +V    G+ 
Sbjct: 577 SSHTIALSKDGRTVWSFGGGDNGKL--------------GHGDTNRVYKPKVVEALQGMF 622

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V AG + +LAL+  GQV+ WG G    LG GS       P  I  + ++   D    
Sbjct: 623 IRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELATTRVVD---- 676

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                                 I+ G  H   ++    +  +G    GQCGQG++   ++
Sbjct: 677 ----------------------ISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPIT 714

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTI 365
            P  V  L G+ I+ ++AG  H++
Sbjct: 715 KPKKVIGLDGVAIQQISAGTSHSL 738



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 41/85 (48%), Gaps = 7/85 (8%)

Query: 220  GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES------ 273
            G+ I  VA G  HTL LS  G V+ WG   EGQLGLG     V  P  +  ++       
Sbjct: 4365 GIHIQDVAVGAEHTLVLSSTGDVYTWGSNSEGQLGLG-HTNHVREPTLVTTLQGKNIHQI 4423

Query: 274  SYGKDRSAALSRGSVNSEGPGFRVP 298
            S G+  SAA +  SV    PG  VP
Sbjct: 4424 SAGRCHSAAWTAPSVPPRAPGSSVP 4448


>gi|194767960|ref|XP_001966082.1| GF19414 [Drosophila ananassae]
 gi|190622967|gb|EDV38491.1| GF19414 [Drosophila ananassae]
          Length = 5087

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 135/306 (44%), Gaps = 80/306 (26%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GG+H LAL+  G+V+ WG G +G+LG G+R+              SY + + 
Sbjct: 4311 VKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRV--------------SYDRPKL 4356

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                            + G  V  IACG  HSA IT +G +LT+G G YG+ G G ++D+
Sbjct: 4357 VE-------------HLHGMSVADIACGSAHSAAITASGQVLTWGKGRYGRLGHGDSEDQ 4403

Query: 341  LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V +LLG +   +A  +G   T+CI+ D +V+++G   +G+LG GG     LP  +
Sbjct: 4404 LRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKI 4463

Query: 399  DA--------------------------------------------------PSLENVHS 408
            ++                                                   +L+    
Sbjct: 4464 ESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKI 4523

Query: 409  KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWW 467
             S++ G+ H    +D G+V+ WG N  GQLG G V     P  V+ ++G     V CG  
Sbjct: 4524 ISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVSALQGKHIVKVTCGSA 4583

Query: 468  HTLLLA 473
            HTL L+
Sbjct: 4584 HTLALS 4589



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 122/255 (47%), Gaps = 36/255 (14%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GG+H LAL+  G+V+ WG G +G+LG G+R              ++  K R 
Sbjct: 3161 VKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNR--------------TTLDKPRQ 3206

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                R                ++ +ACG  HSA I+  G L T+G G YG+ G G    +
Sbjct: 3207 VEALR-------------AKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQ 3253

Query: 341  LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V++L G ++  VA G     T+ ++ DG V+++G   FG+LG GG +    P  +
Sbjct: 3254 LKPKLVAALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEI 3313

Query: 399  DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCV 458
            +   L  +    + CGA+ +  +   G+V+ WG   Y +LG G   D+++     I G  
Sbjct: 3314 E--RLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGG--DQHVRKPQPIGGLR 3369

Query: 459  PR---NVACGWWHTL 470
             R   +VA G  H L
Sbjct: 3370 GRRVIHVAVGALHCL 3384



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 96/324 (29%), Positives = 136/324 (41%), Gaps = 50/324 (15%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V   +G  HC+A+T  GEVY WG  E        G L  G  +  D        L E + 
Sbjct: 4314 VAVNSGGKHCLALTTEGEVYAWGEGE-------DGKLGHGNRVSYD-----RPKLVEHLH 4361

Query: 161  PRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPG 220
              S V+  + G++       SG+       ++  K        GD      P LV    G
Sbjct: 4362 GMS-VADIACGSAHSAAITASGQV------LTWGKGRYGRLGHGDSEDQLRPKLVEALLG 4414

Query: 221  VRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
             R   +A  +G   TL ++D   VW WG G  G+LG G      S    +P     Y  +
Sbjct: 4415 YRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGG-----SDGCKLP-----YKIE 4464

Query: 279  RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
              A L                  V  + CG + S  +T +GA+ T+G G + + G GS D
Sbjct: 4465 SLAGLG-----------------VIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVD 4507

Query: 339  DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
                P  V++L G +I  +A G  H +  S  G+VY +G N  GQLG G   A   PRL+
Sbjct: 4508 HVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLV 4567

Query: 399  DAPSLENVHSKSVSCGARHTAVIA 422
             A  L+  H   V+CG+ HT  ++
Sbjct: 4568 SA--LQGKHIVKVTCGSAHTLALS 4589



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 118/255 (46%), Gaps = 30/255 (11%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            +R   +A G +    +S  G+V+  G G  G+LGLG     V  PH +P +     K   
Sbjct: 3107 LRPIHIAGGSKSLFIVSQEGRVFACGEGTNGRLGLGVTYN-VPLPHQLPVLHQYVVK--- 3162

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                + +V+S                 GG+H+  +T  G + ++G G  G+ G G+    
Sbjct: 3163 ----KVAVHS-----------------GGKHALALTLDGKVFSWGEGEDGKLGHGNRTTL 3201

Query: 341  LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
              P  V +L   +I  VA G  H+  ISS G++Y +G  ++G+LG G +  +  P+L+ A
Sbjct: 3202 DKPRQVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVAA 3261

Query: 401  PSLENVHSKSVSCGAR--HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGC 457
              L       V+CG+R   T  + +DG VF WG   +G+LG G     + P ++  + G 
Sbjct: 3262 --LAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGI 3319

Query: 458  VPRNVACGWWHTLLL 472
                + CG   +L L
Sbjct: 3320 GVIQIECGAQFSLAL 3334



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 97/339 (28%), Positives = 136/339 (40%), Gaps = 58/339 (17%)

Query: 88   IPEPFPLPT-EASIVKAAA---GWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGL 143
            +P P  LP     +VK  A   G  H +A+T  G+V++WG  E        G L  G   
Sbjct: 3147 VPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGE-------DGKLGHGNRT 3199

Query: 144  DKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGR--GSGEEGSKRRRISLAKQTAESS 201
              D   +  +   +++   +  S  S   SS  +    G GE G                
Sbjct: 3200 TLDKPRQVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRL-------------- 3245

Query: 202  SSGDENLSAFPCLVTLNPGVRIATVAAGGR--HTLALSDIGQVWGWGYGGEGQLGLGSRI 259
              GD      P LV    G R+  VA G R   TLAL++ G V+ WG G  G+LG G   
Sbjct: 3246 GHGDNATQLKPKLVAALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG-- 3303

Query: 260  RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAG 319
                          S G D    + R S           G  V  I CG + S  +T AG
Sbjct: 3304 --------------SEGSDTPHEIERLS-----------GIGVIQIECGAQFSLALTRAG 3338

Query: 320  ALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN 379
             + T+G G Y + G G       P  +  L G ++  VA G  H + ++  G VYA+G N
Sbjct: 3339 EVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDSGQVYAWGDN 3398

Query: 380  QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
              GQ G+G       P L+    L++V    V+CG+ H+
Sbjct: 3399 DHGQQGSGNTFVNKKPALVIG--LDDVFVNRVACGSSHS 3435



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 119/238 (50%), Gaps = 45/238 (18%)

Query: 230 GRHTLALSDIGQVWGWGYGGEGQLGLG-SRIRMVSSPHPIPCIESSYGKDRSAALSRGSV 288
           GRH +A+      + WG G + +LG G +  R V +              + AAL +  V
Sbjct: 640 GRHFMAIDSNHNAYSWGAGEDHRLGHGDTHARAVPT--------------KIAALEQHCV 685

Query: 289 NSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS 348
            S              + CG  +SAVIT  G LLT+G G Y + G G++DD   P  V++
Sbjct: 686 QS--------------VFCGCTYSAVITCGGNLLTWGRGTYARLGHGNSDDRCLPTLVAA 731

Query: 349 LLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENV 406
           L    +  VA  +G  H++ ++S+G V+A+G   +G+LG G       P L++  SL  V
Sbjct: 732 LAEHTVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVE--SLPRV 789

Query: 407 HSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC-VPRNVA 463
             + +  G++++  ++ +G+V+ WG  K   LG   +++R      +++GC VPR V+
Sbjct: 790 --QRIFAGSQYSVALSSEGQVYTWG--KATCLG-HQLVER------SVQGCSVPRLVS 836



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 108/230 (46%), Gaps = 38/230 (16%)

Query: 242  VWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPG 299
            ++GWG+   GQLG   GSRI+      P PC   S  +    A                 
Sbjct: 4226 IYGWGHNHRGQLGGLEGSRIKT-----PTPCEALSLLRPVQLA----------------- 4263

Query: 300  NYVKGIACGGRHSAV-ITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
                    GG  S   +T  G L   G+G  G+ G G +D    P  + SL  + ++ VA
Sbjct: 4264 --------GGEQSLFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVA 4315

Query: 359  --AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR 416
              +G  H + ++++G+VYA+G  + G+LG G   +   P+L++   L  +    ++CG+ 
Sbjct: 4316 VNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRVSYDRPKLVE--HLHGMSVADIACGSA 4373

Query: 417  HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
            H+A I   G+V  WG  +YG+LG GD  D+  P  V  + G    ++ACG
Sbjct: 4374 HSAAITASGQVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACG 4423



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 135/345 (39%), Gaps = 60/345 (17%)

Query: 24   LPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDD--LGQSYVT 81
            LP + P+L   VV+         +     G   A+A++   K+ +WG  +D  LG    T
Sbjct: 3149 LPHQLPVLHQYVVK---------KVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRT 3199

Query: 82   SGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGT 141
            +    + P          I   A G +H  A++  GE+YTWG  E    GR  G     T
Sbjct: 3200 TL---DKPRQVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGE---YGR-LGHGDNAT 3252

Query: 142  GLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGR-GSGEEGSKRRRISLAKQTAES 200
             L   +    +     QV+  S+ +++   T  G     G G+ G       L +  +E 
Sbjct: 3253 QLKPKLVAALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGK------LGRGGSEG 3306

Query: 201  SSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR 260
            S +  E        +    G+ +  +  G + +LAL+  G+VW WG G   +LG G   +
Sbjct: 3307 SDTPHE--------IERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGD-Q 3357

Query: 261  MVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA 320
             V  P PI                         G R  G  V  +A G  H   +TD+G 
Sbjct: 3358 HVRKPQPI------------------------GGLR--GRRVIHVAVGALHCLAVTDSGQ 3391

Query: 321  LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTI 365
            +  +G   +GQ G G+T     P  V  L  + +  VA G  H+I
Sbjct: 3392 VYAWGDNDHGQQGSGNTFVNKKPALVIGLDDVFVNRVACGSSHSI 3436



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 62/136 (45%)

Query: 307 CGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC 366
           C GRH   I       ++G G   + G G T     P  +++L    ++ V  G  ++  
Sbjct: 638 CEGRHFMAIDSNHNAYSWGAGEDHRLGHGDTHARAVPTKIAALEQHCVQSVFCGCTYSAV 697

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           I+  G++  +G   + +LG G      LP L+ A +   V   ++  G  H+  +  +G 
Sbjct: 698 ITCGGNLLTWGRGTYARLGHGNSDDRCLPTLVAALAEHTVVDVALGSGDAHSLALTSEGL 757

Query: 427 VFCWGWNKYGQLGLGD 442
           VF WG   YG+LG G+
Sbjct: 758 VFAWGDGDYGKLGNGN 773



 Score = 47.4 bits (111), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 1/77 (1%)

Query: 52  GGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHG-EIPEPFPLPTEASIVKAAAGWAHC 110
            G  +++A+S   ++ TWG    LG   V     G  +P          IV  A G AHC
Sbjct: 794 AGSQYSVALSSEGQVYTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDMAVGVAHC 853

Query: 111 VAVTEGGEVYTWGWKEC 127
           +A++  GEV+ WG  +C
Sbjct: 854 LALSSSGEVFGWGRNDC 870



 Score = 47.4 bits (111), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 13/159 (8%)

Query: 319  GALLTFGWGL--YGQCG--QGSTDDELSP-NCVSSLLGIQIEGVAAGLWHTICISSDGDV 373
            GA   +GWG    GQ G  +GS     +P   +S L  +Q+ G    L+    ++ DG +
Sbjct: 4222 GASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLF---AVTPDGKL 4278

Query: 374  YAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSK--SVSCGARHTAVIADDGKVFCWG 431
            +A G    G+LG GG  +  +P LL   SL++V  K  +V+ G +H   +  +G+V+ WG
Sbjct: 4279 FATGYGSGGRLGVGGSDSWAIPTLLG--SLQHVFVKKVAVNSGGKHCLALTTEGEVYAWG 4336

Query: 432  WNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHT 469
              + G+LG G+ +  + P  V  + G    ++ACG  H+
Sbjct: 4337 EGEDGKLGHGNRVSYDRPKLVEHLHGMSVADIACGSAHS 4375



 Score = 47.0 bits (110), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 90/210 (42%), Gaps = 36/210 (17%)

Query: 213 CLVTLNPGVRIATVA-----AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHP 267
           CL TL   +   TV      +G  H+LAL+  G V+ WG G  G+LG G+      S  P
Sbjct: 724 CLPTLVAALAEHTVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGN---CNGSLQP 780

Query: 268 IPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWG 327
           I  +ES         L R                V+ I  G ++S  ++  G + T+G  
Sbjct: 781 I-LVES---------LPR----------------VQRIFAGSQYSVALSSEGQVYTWGKA 814

Query: 328 --LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLG 385
             L  Q  + S      P  VSSL   +I  +A G+ H + +SS G+V+ +G N   Q+ 
Sbjct: 815 TCLGHQLVERSVQGCSVPRLVSSLQHKRIVDMAVGVAHCLALSSSGEVFGWGRNDCQQVC 874

Query: 386 TGGDQAETLPRLLDAPSLENVHSKSVSCGA 415
                +E L R     +L  + +  ++C A
Sbjct: 875 PSSVSSEPLLRSPILVALPTLPASGIACTA 904



 Score = 43.1 bits (100), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 79/201 (39%), Gaps = 32/201 (15%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGE-----IPEPFPLPTEASIVKAA--A 105
           GC ++  I+    L+TWG       +Y   G HG      +P       E ++V  A  +
Sbjct: 691 GCTYSAVITCGGNLLTWGRG-----TYARLG-HGNSDDRCLPTLVAALAEHTVVDVALGS 744

Query: 106 GWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQV 165
           G AH +A+T  G V+ WG  +       +G L  G            S     V    +V
Sbjct: 745 GDAHSLALTSEGLVFAWGDGD-------YGKLGNGNC--------NGSLQPILVESLPRV 789

Query: 166 SRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIAT 225
            R   G+         G+  +  +   L  Q  E S  G     + P LV+     RI  
Sbjct: 790 QRIFAGSQYSVALSSEGQVYTWGKATCLGHQLVERSVQG----CSVPRLVSSLQHKRIVD 845

Query: 226 VAAGGRHTLALSDIGQVWGWG 246
           +A G  H LALS  G+V+GWG
Sbjct: 846 MAVGVAHCLALSSSGEVFGWG 866


>gi|159037173|ref|YP_001536426.1| chromosome condensation regulator RCC1 [Salinispora arenicola
           CNS-205]
 gi|157916008|gb|ABV97435.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
           CNS-205]
          Length = 569

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 116/410 (28%), Positives = 166/410 (40%), Gaps = 77/410 (18%)

Query: 81  TSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTG 140
           T+  +  +P P  LP    +  AA G AH +AVT  G V  WG           G L  G
Sbjct: 79  TTNNYRTVPIPVGLPKGTEVTAAAGGDAHSLAVTSAGTVLAWGRNAV-------GQLGDG 131

Query: 141 TGLDKDVFERQSSFLTEQVSPRSQVSRSSGG-------TSSGT------DGRGSGEEGSK 187
           T +++      S+ +  ++ P + V+  + G       TS+GT      +  G   +G++
Sbjct: 132 TTINR------STPVDVRLPPGTTVTAVAAGFNHSLALTSAGTVFAWGDNSTGQLGDGTR 185

Query: 188 RRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGY 247
             R                   + P  V+   G  I  VAAGG H+LAL+  G V+ WG 
Sbjct: 186 TNR-------------------STPVAVSFPSGTVITAVAAGGMHSLALTSAGTVFAWGD 226

Query: 248 GGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVP-GNYVKGIA 306
              GQLG G+R                   +RS  +  G          +P G  V  IA
Sbjct: 227 NSTGQLGDGTR------------------TNRSTPVVVG----------LPVGTIVTAIA 258

Query: 307 CGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC 366
            GG HS  +T AG    +G    GQ G GS  +  +   V    G  +  VA GL H++ 
Sbjct: 259 GGGSHSLAVTSAGNARAWGNNFVGQLGDGSNINRDASVHVRLPPGTTVTAVAGGLTHSLA 318

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           ++S G V ++G N +GQLG G  +    P  +  P    V   +V+ G      +   G 
Sbjct: 319 LTSVGTVLSWGSNNWGQLGDGTARDRNTPGSVSLP--PGVTITAVAAGDLFGLALTSAGT 376

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIE-GCVPRNVACGWWHTLLLAVP 475
           V  WG N  GQLG G    R  P   ++        +A G  H+L L  P
Sbjct: 377 VLAWGGNIVGQLGDGTTTVRRTPVAASLPTATTITAIATGSGHSLALVAP 426



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/165 (33%), Positives = 80/165 (48%), Gaps = 4/165 (2%)

Query: 310 RHSAVITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVAAGLWHTICIS 368
           R S     + A+L +G   YGQ G G+T++  + P  V    G ++   A G  H++ ++
Sbjct: 53  RPSPTTVASDAVLAWGDNYYGQLGDGTTNNYRTVPIPVGLPKGTEVTAAAGGDAHSLAVT 112

Query: 369 SDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVF 428
           S G V A+G N  GQLG G     + P  +  P    V   +V+ G  H+  +   G VF
Sbjct: 113 SAGTVLAWGRNAVGQLGDGTTINRSTPVDVRLPPGTTV--TAVAAGFNHSLALTSAGTVF 170

Query: 429 CWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACGWWHTLLL 472
            WG N  GQLG G   +R+ P  V+   G V   VA G  H+L L
Sbjct: 171 AWGDNSTGQLGDGTRTNRSTPVAVSFPSGTVITAVAAGGMHSLAL 215


>gi|332030031|gb|EGI69856.1| X-linked retinitis pigmentosa GTPase regulator-like protein
            [Acromyrmex echinatior]
          Length = 2956

 Score =  112 bits (280), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 68/211 (32%), Positives = 108/211 (51%), Gaps = 32/211 (15%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            + + +V+ G  HTLA+++ G ++ WG    GQLGLG ++   SSP  +  +      D  
Sbjct: 1945 IEVFSVSCGHCHTLAVTNNG-IYAWGASQFGQLGLG-KVLQCSSPELVTSLAQEIIVDA- 2001

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                            V G Y         HS  +T  G + T+GWG++GQ G G+TD++
Sbjct: 2002 ----------------VAGQY---------HSVALTADGRIFTWGWGVHGQLGHGNTDEK 2036

Query: 341  LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
              P+ V +LLGI +  ++AG  HT+ +S DG +YAFG N  GQLGTG +   ++P  +  
Sbjct: 2037 AIPSLVKALLGIVVCCISAGYAHTLALSIDGVLYAFGCNILGQLGTGDNIKSSVPIKVSL 2096

Query: 401  PSLENVHSKSVSCGARHTAVIADDGKVFCWG 431
            P    +    +S G  H   +++  K++ WG
Sbjct: 2097 PDRITL----ISTGYFHNLAVSNTNKLYIWG 2123



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 71/261 (27%), Positives = 124/261 (47%), Gaps = 33/261 (12%)

Query: 215  VTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESS 274
            +T++   +  +++ G  H +AL   G ++ WG   +G LG GS +    +PH I C    
Sbjct: 1885 MTMHVDFKRRSLSTGFSH-VALVRNGNIYTWGSSVQGCLGTGSSVLRYGTPHAI-CF--- 1939

Query: 275  YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQC 332
                                F+     V  ++CG  H+  +T+ G    + WG   +GQ 
Sbjct: 1940 --------------------FKSMKIEVFSVSCGHCHTLAVTNNG---IYAWGASQFGQL 1976

Query: 333  GQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAE 392
            G G      SP  V+SL    I    AG +H++ +++DG ++ +G    GQLG G    +
Sbjct: 1977 GLGKVLQCSSPELVTSLAQEIIVDAVAGQYHSVALTADGRIFTWGWGVHGQLGHGNTDEK 2036

Query: 393  TLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
             +P L+ A  L  +    +S G  HT  ++ DG ++ +G N  GQLG GD I  ++P +V
Sbjct: 2037 AIPSLVKA--LLGIVVCCISAGYAHTLALSIDGVLYAFGCNILGQLGTGDNIKSSVPIKV 2094

Query: 453  TIEGCVPRNVACGWWHTLLLA 473
            ++   +   ++ G++H L ++
Sbjct: 2095 SLPDRITL-ISTGYFHNLAVS 2114



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 55/176 (31%), Positives = 98/176 (55%), Gaps = 8/176 (4%)

Query: 303  KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL-SPN--CVSSLLGIQIEGVAA 359
            + ++ G  H A++ + G + T+G  + G  G GS+     +P+  C    + I++  V+ 
Sbjct: 1894 RSLSTGFSHVALVRN-GNIYTWGSSVQGCLGTGSSVLRYGTPHAICFFKSMKIEVFSVSC 1952

Query: 360  GLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            G  HT+ ++++G +YA+G +QFGQLG G     + P L+ + + E +       G  H+ 
Sbjct: 1953 GHCHTLAVTNNG-IYAWGASQFGQLGLGKVLQCSSPELVTSLAQEII--VDAVAGQYHSV 2009

Query: 420  VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLAV 474
             +  DG++F WGW  +GQLG G+  ++ IPS V  + G V   ++ G+ HTL L++
Sbjct: 2010 ALTADGRIFTWGWGVHGQLGHGNTDEKAIPSLVKALLGIVVCCISAGYAHTLALSI 2065



 Score = 50.1 bits (118), Expect = 0.002,   Method: Composition-based stats.
 Identities = 64/235 (27%), Positives = 92/235 (39%), Gaps = 40/235 (17%)

Query: 55   GFA-MAISDSRKLITWGSTDD----LGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAH 109
            GF+ +A+  +  + TWGS+       G S +  G    I   F    +  +   + G  H
Sbjct: 1899 GFSHVALVRNGNIYTWGSSVQGCLGTGSSVLRYGTPHAIC--FFKSMKIEVFSVSCGHCH 1956

Query: 110  CVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSS 169
             +AVT  G +Y WG  +       FG L  G  L     E  +S   E +     V+   
Sbjct: 1957 TLAVTNNG-IYAWGASQ-------FGQLGLGKVLQCSSPELVTSLAQEIIV--DAVAGQY 2006

Query: 170  GGTSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIAT 225
               +   DGR    G G  G                  G+ +  A P LV    G+ +  
Sbjct: 2007 HSVALTADGRIFTWGWGVHGQL--------------GHGNTDEKAIPSLVKALLGIVVCC 2052

Query: 226  VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR-----MVSSPHPIPCIESSY 275
            ++AG  HTLALS  G ++ +G    GQLG G  I+      VS P  I  I + Y
Sbjct: 2053 ISAGYAHTLALSIDGVLYAFGCNILGQLGTGDNIKSSVPIKVSLPDRITLISTGY 2107



 Score = 42.4 bits (98), Expect = 0.55,   Method: Composition-based stats.
 Identities = 73/352 (20%), Positives = 128/352 (36%), Gaps = 68/352 (19%)

Query: 49   VCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAG 106
            VC    G+A  +A+S    L  +G  + LGQ          +P    LP   +++  + G
Sbjct: 2050 VCCISAGYAHTLALSIDGVLYAFG-CNILGQLGTGDNIKSSVPIKVSLPDRITLI--STG 2106

Query: 107  WAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVS 166
            + H +AV+   ++Y WG    V   +            +D  E+++  L E     S  +
Sbjct: 2107 YFHNLAVSNTNKLYIWGASPQVLRLQAQAQKKIRISEQQDANEKRNKALGELEKIPSDAT 2166

Query: 167  RSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAF-------------PC 213
              +G      + +   +  S     S   +T +   + + +L  F             PC
Sbjct: 2167 NLNGKIKEFLNKKDGVQTKSSHTETS-DIETQKKFETKNAHLKDFNFDLIEESQTHLKPC 2225

Query: 214  LV--TLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI--- 268
            +V  +L  G +I  ++ G  H   ++  G ++ WG   +GQ+G G+R R V  P P+   
Sbjct: 2226 IVDTSLVKG-QINQISVGCHHNALITKDGSLYTWGRNLDGQIGNGTR-REVLIPTPLYYN 2283

Query: 269  -PCI------------------------ESSYG--------------KDRSAALSRGSVN 289
              CI                        +S+Y                D S  +    +N
Sbjct: 2284 SACIFAQIPPRHNDFKRIQNQRDLDTDAKSNYSLANNGNVPENNGNISDSSIYVENADIN 2343

Query: 290  SEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL 341
            +E      P      +ACG  ++  I   G +L +G     Q     +DD+L
Sbjct: 2344 TERTN---PVINAVSVACGYDYTVTIQPGGTVLAWGNNSRAQLDARDSDDKL 2392


>gi|449442577|ref|XP_004139058.1| PREDICTED: uncharacterized protein LOC101219074 [Cucumis sativus]
          Length = 1103

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 63/171 (36%), Positives = 97/171 (56%), Gaps = 4/171 (2%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ IACG RH+A++T  G + ++G    G+ G G   D   P  + +L  + IE VA G 
Sbjct: 310 VQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAHHPKLIDALSNLNIELVACGE 369

Query: 362 WHTICISSDGDVYAFGGNQF--GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
           +HT  ++  GD+Y +G   +  G LG G D +  +P+ +  P L+ +H  S+SCG  HTA
Sbjct: 370 YHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRVTGP-LQGLHISSISCGPWHTA 428

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
           ++   GK+F +G   +G LG GD    +IP +V +++G      ACG WHT
Sbjct: 429 LVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVESLKGLRTVRAACGVWHT 479



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 79/275 (28%), Positives = 121/275 (44%), Gaps = 41/275 (14%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P L+     + I  VA G  HT A++  G ++ WG G      LG               
Sbjct: 351 PKLIDALSNLNIELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLG--------------- 395

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
              +GKD S  + +      GP   + G ++  I+CG  H+A++T AG L TFG G +G 
Sbjct: 396 ---HGKDVSHWVPKRVT---GP---LQGLHISSISCGPWHTALVTSAGKLFTFGDGTFGV 446

Query: 332 CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI------------SSDGDVYAFGGN 379
            G G  D    P  V SL G++    A G+WHT  +            +S G ++ +G  
Sbjct: 447 LGHGDRDSISIPREVESLKGLRTVRAACGVWHTAAVVEVIIGNPNSNNNSSGKLFTWGDG 506

Query: 380 QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG 439
             G+LG G  +A  +P  + A  L   +   V+CG   T  + + G ++  G   YGQLG
Sbjct: 507 DKGRLGHGDKEARLVPTCVAA--LVEPNFCQVACGHSLTVALTNSGHIYTMGSPVYGQLG 564

Query: 440 LGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLL 472
                D  +P++V   +       +ACG +H  +L
Sbjct: 565 -NPQADGKLPARVEGKLSKSFVEELACGAYHVAVL 598



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 77/138 (55%), Gaps = 6/138 (4%)

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D L P  + S++ + ++ +A G  H   ++  G+V+++G    G+LG GGD     P+L+
Sbjct: 295 DSLLPKALESVVVLDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAHHPKLI 354

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKY--GQLGLGDVIDRNIPSQVT--I 454
           DA  L N++ + V+CG  HT  +   G ++ WG   Y  G LG G  +   +P +VT  +
Sbjct: 355 DA--LSNLNIELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRVTGPL 412

Query: 455 EGCVPRNVACGWWHTLLL 472
           +G    +++CG WHT L+
Sbjct: 413 QGLHISSISCGPWHTALV 430



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 103/231 (44%), Gaps = 43/231 (18%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDI------------GQVWGWGYGGEG 251
           GD +  + P  V    G+R    A G  HT A+ ++            G+++ WG G +G
Sbjct: 450 GDRDSISIPREVESLKGLRTVRAACGVWHTAAVVEVIIGNPNSNNNSSGKLFTWGDGDKG 509

Query: 252 QLGLGSR-IRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGR 310
           +LG G +  R+V +     C+         AAL             V  N+ + +ACG  
Sbjct: 510 RLGHGDKEARLVPT-----CV---------AAL-------------VEPNFCQ-VACGHS 541

Query: 311 HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
            +  +T++G + T G  +YGQ G    D +L       L    +E +A G +H   ++S 
Sbjct: 542 LTVALTNSGHIYTMGSPVYGQLGNPQADGKLPARVEGKLSKSFVEELACGAYHVAVLTSR 601

Query: 371 GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
            +VY +G    G+LG G       P L++A  L++   KS++CG   TA I
Sbjct: 602 TEVYTWGKGANGRLGHGSTDDRNTPTLVEA--LKDKQVKSIACGTNFTAAI 650


>gi|449680679|ref|XP_002161042.2| PREDICTED: uncharacterized protein LOC100209924 [Hydra
           magnipapillata]
          Length = 809

 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 87/274 (31%), Positives = 132/274 (48%), Gaps = 35/274 (12%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
           G+E    FP +V    G  I TVA G  HTLA+S  G+++ WG G  G+LGL + +    
Sbjct: 389 GEETEELFPRVVEALLGRDIRTVACGTEHTLAVSVNGEMFSWGCGRGGKLGLKNIL---- 444

Query: 264 SPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLT 323
                         DR   L  G+  +    F         ++C   HSA +T++G L T
Sbjct: 445 --------------DRYMPLKIGAFENVNITF---------VSCNELHSASVTESGELYT 481

Query: 324 FGWGLYGQCGQGSTDD--ELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
           FG    G     +T+D  +  P  V      +I+ V+ GL  TI ++S+G++Y+FG N  
Sbjct: 482 FGRS--GPHLGYTTEDRKQAVPRKVDFSTANKIKAVSCGLEFTIALNSEGELYSFGKNDC 539

Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
           GQLG G       P L+    L  V    VSCG++H   +  +G V+ WG N++GQLG  
Sbjct: 540 GQLGAGHFNDIEEPYLI--KHLNGVRISKVSCGSKHVGAVTVNGDVWLWGSNEFGQLGTD 597

Query: 442 DVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLA 473
            +   +IP +   T      +++ CG  HT++L+
Sbjct: 598 KLEAHDIPFEAPSTFWNEEIQDIKCGGSHTVVLS 631



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 106/395 (26%), Positives = 169/395 (42%), Gaps = 58/395 (14%)

Query: 85  HGE-IPEPFPLPTEA----SIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLST 139
           HGE   E FP   EA     I   A G  H +AV+  GE+++WG       GR  G L  
Sbjct: 388 HGEETEELFPRVVEALLGRDIRTVACGTEHTLAVSVNGEMFSWG------CGRG-GKLGL 440

Query: 140 GTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAE 199
              LD+ +  +  +F    ++    VS +   ++S T+   SGE        +  +    
Sbjct: 441 KNILDRYMPLKIGAFENVNITF---VSCNELHSASVTE---SGE------LYTFGRSGPH 488

Query: 200 SSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
              + ++   A P  V  +   +I  V+ G   T+AL+  G+++ +G    GQLG G   
Sbjct: 489 LGYTTEDRKQAVPRKVDFSTANKIKAVSCGLEFTIALNSEGELYSFGKNDCGQLGAG-HF 547

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAG 319
             +  P+ I                            + G  +  ++CG +H   +T  G
Sbjct: 548 NDIEEPYLIK--------------------------HLNGVRISKVSCGSKHVGAVTVNG 581

Query: 320 ALLTFGWGLYGQCGQGSTDDELSP-NCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            +  +G   +GQ G    +    P    S+    +I+ +  G  HT+ +S  G VY FG 
Sbjct: 582 DVWLWGSNEFGQLGTDKLEAHDIPFEAPSTFWNEEIQDIKCGGSHTVVLSCTGVVYVFGN 641

Query: 379 NQFGQLGTGGDQAE---TLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKY 435
            Q GQLG   +Q     T P +L  P+  N     V CG  HTA + + G ++ WG    
Sbjct: 642 GQSGQLGVAVNQTSPYITNPCILSMPN--NTKIAKVDCGIEHTAAVTESGCLYTWGNGSR 699

Query: 436 GQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
           G+LG GD  DR +P+ V ++     +++ACG +HT
Sbjct: 700 GRLGHGDHQDRYVPTLVESLAYKQVQSIACGAYHT 734



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 107/420 (25%), Positives = 164/420 (39%), Gaps = 73/420 (17%)

Query: 14  VFMWGYLPGALP---QRSPILSPLVVRLPLTVGSAWRDVCGGGCG--FAMAISDSRKLIT 68
           ++ WG  P  +    + +  L P VV   L      RD+    CG    +A+S + ++ +
Sbjct: 375 IYTWGASPKGVLGHGEETEELFPRVVEALLG-----RDIRTVACGTEHTLAVSVNGEMFS 429

Query: 69  WGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKE 126
           WG      LG   +       +P         +I   +    H  +VTE GE+YT+G   
Sbjct: 430 WGCGRGGKLGLKNILDRY---MPLKIGAFENVNITFVSCNELHSASVTESGELYTFG--- 483

Query: 127 CVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGS 186
                R    L   T   K    R+  F     S  +++   S G          GE   
Sbjct: 484 -----RSGPHLGYTTEDRKQAVPRKVDF-----STANKIKAVSCGLEFTIALNSEGE--- 530

Query: 187 KRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWG 246
                S  K       +G  N    P L+    GVRI+ V+ G +H  A++  G VW WG
Sbjct: 531 ---LYSFGKNDCGQLGAGHFNDIEEPYLIKHLNGVRISKVSCGSKHVGAVTVNGDVWLWG 587

Query: 247 YGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNY----V 302
               GQLG           H IP                         F  P  +    +
Sbjct: 588 SNEFGQLGTDKL-----EAHDIP-------------------------FEAPSTFWNEEI 617

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCG--QGSTDDELSPNCVSSL-LGIQIEGVAA 359
           + I CGG H+ V++  G +  FG G  GQ G     T   ++  C+ S+    +I  V  
Sbjct: 618 QDIKCGGSHTVVLSCTGVVYVFGNGQSGQLGVAVNQTSPYITNPCILSMPNNTKIAKVDC 677

Query: 360 GLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
           G+ HT  ++  G +Y +G    G+LG G  Q   +P L+++ + + V  +S++CGA HTA
Sbjct: 678 GIEHTAAVTESGCLYTWGNGSRGRLGHGDHQDRYVPTLVESLAYKQV--QSIACGAYHTA 735



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 71/142 (50%), Gaps = 2/142 (1%)

Query: 290 SEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSL 349
           SE    +  G  +  +   G   +V  DA  + T+G    G  G G   +EL P  V +L
Sbjct: 344 SEADLSKADGKLMLELGLFGDRVSVKEDACDIYTWGASPKGVLGHGEETEELFPRVVEAL 403

Query: 350 LGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSK 409
           LG  I  VA G  HT+ +S +G+++++G  + G+LG        +P  L   + ENV+  
Sbjct: 404 LGRDIRTVACGTEHTLAVSVNGEMFSWGCGRGGKLGLKNILDRYMP--LKIGAFENVNIT 461

Query: 410 SVSCGARHTAVIADDGKVFCWG 431
            VSC   H+A + + G+++ +G
Sbjct: 462 FVSCNELHSASVTESGELYTFG 483



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 58/99 (58%), Gaps = 3/99 (3%)

Query: 372 DVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWG 431
           D+Y +G +  G LG G +  E  PR+++A    ++  ++V+CG  HT  ++ +G++F WG
Sbjct: 374 DIYTWGASPKGVLGHGEETEELFPRVVEALLGRDI--RTVACGTEHTLAVSVNGEMFSWG 431

Query: 432 WNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
             + G+LGL +++DR +P ++   E      V+C   H+
Sbjct: 432 CGRGGKLGLKNILDRYMPLKIGAFENVNITFVSCNELHS 470


>gi|449476139|ref|XP_004154652.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101226798 [Cucumis sativus]
          Length = 1103

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 63/171 (36%), Positives = 97/171 (56%), Gaps = 4/171 (2%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ IACG RH+A++T  G + ++G    G+ G G   D   P  + +L  + IE VA G 
Sbjct: 310 VQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAHHPKLIDALSNLNIELVACGE 369

Query: 362 WHTICISSDGDVYAFGGNQF--GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
           +HT  ++  GD+Y +G   +  G LG G D +  +P+ +  P L+ +H  S+SCG  HTA
Sbjct: 370 YHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRVTGP-LQGLHISSISCGPWHTA 428

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
           ++   GK+F +G   +G LG GD    +IP +V +++G      ACG WHT
Sbjct: 429 LVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVESLKGLRTVRAACGVWHT 479



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 79/275 (28%), Positives = 121/275 (44%), Gaps = 41/275 (14%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P L+     + I  VA G  HT A++  G ++ WG G      LG               
Sbjct: 351 PKLIDALSNLNIELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLG--------------- 395

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
              +GKD S  + +      GP   + G ++  I+CG  H+A++T AG L TFG G +G 
Sbjct: 396 ---HGKDVSHWVPKRVT---GP---LQGLHISSISCGPWHTALVTSAGKLFTFGDGTFGV 446

Query: 332 CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI------------SSDGDVYAFGGN 379
            G G  D    P  V SL G++    A G+WHT  +            +S G ++ +G  
Sbjct: 447 LGHGDRDSISIPREVESLKGLRTVRAACGVWHTAAVVEVIIGNPNSNNNSSGKLFTWGDG 506

Query: 380 QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG 439
             G+LG G  +A  +P  + A  L   +   V+CG   T  + + G ++  G   YGQLG
Sbjct: 507 DKGRLGHGDKEARLVPTCVAA--LVEPNFCQVACGHSLTVALTNSGHIYTMGSPVYGQLG 564

Query: 440 LGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLL 472
                D  +P++V   +       +ACG +H  +L
Sbjct: 565 -NPQADGKLPARVEGKLSKSFVEELACGAYHVAVL 598



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 77/138 (55%), Gaps = 6/138 (4%)

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D L P  + S++ + ++ +A G  H   ++  G+V+++G    G+LG GGD     P+L+
Sbjct: 295 DSLLPKALESVVVLDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAHHPKLI 354

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKY--GQLGLGDVIDRNIPSQVT--I 454
           DA  L N++ + V+CG  HT  +   G ++ WG   Y  G LG G  +   +P +VT  +
Sbjct: 355 DA--LSNLNIELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRVTGPL 412

Query: 455 EGCVPRNVACGWWHTLLL 472
           +G    +++CG WHT L+
Sbjct: 413 QGLHISSISCGPWHTALV 430



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 103/231 (44%), Gaps = 43/231 (18%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDI------------GQVWGWGYGGEG 251
           GD +  + P  V    G+R    A G  HT A+ ++            G+++ WG G +G
Sbjct: 450 GDRDSISIPREVESLKGLRTVRAACGVWHTAAVVEVIIGNPNSNNNSSGKLFTWGDGDKG 509

Query: 252 QLGLGSR-IRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGR 310
           +LG G +  R+V +     C+         AAL             V  N+ + +ACG  
Sbjct: 510 RLGHGDKEARLVPT-----CV---------AAL-------------VEPNFCQ-VACGHS 541

Query: 311 HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
            +  +T++G + T G  +YGQ G    D +L       L    +E +A G +H   ++S 
Sbjct: 542 LTVALTNSGHIYTMGSPVYGQLGNPQADGKLPARVEGKLSKSFVEELACGAYHVAVLTSR 601

Query: 371 GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
            +VY +G    G+LG G       P L++A  L++   KS++CG   TA I
Sbjct: 602 TEVYTWGKGANGRLGHGSTDDRNTPTLVEA--LKDKQVKSIACGTNFTAAI 650


>gi|332233498|ref|XP_003265939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
           [Nomascus leucogenys]
          Length = 984

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 84/262 (32%), Positives = 122/262 (46%), Gaps = 38/262 (14%)

Query: 214 LVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES 273
           L TLN    +  V+ G  H+LA+   G+V+ WG G EGQLG+G    +  +P  I  +  
Sbjct: 72  LETLN----VDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGELKEISFTPKKITTLN- 126

Query: 274 SYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCG 333
                                    G  +  ++CG  HS  ++    + ++G   +GQ G
Sbjct: 127 -------------------------GIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLG 161

Query: 334 QGST-DDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAE 392
            G     + SP  V SL GI +  VAAG  H+  +S  G  + +G N  GQL   G    
Sbjct: 162 LGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSG---R 218

Query: 393 TLPRLLDAP----SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNI 448
            +P   + P    +L+N+    +SCGA HTAV+  DGKVF +G N+ GQLG     ++  
Sbjct: 219 NVPVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRG 278

Query: 449 PSQVTIEGCVPRNVACGWWHTL 470
           P  V I   +   V CG +HTL
Sbjct: 279 PQLVEIIDGLVSQVDCGSYHTL 300



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/232 (28%), Positives = 103/232 (44%), Gaps = 37/232 (15%)

Query: 206 ENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSP 265
           + +S  P  +T   G++I  V+ G  H+LALS   QV+ WG    GQLGLG      +SP
Sbjct: 113 KEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASP 172

Query: 266 HPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFG 325
             +  +E                          G  +  +A GG HS  ++  G   +FG
Sbjct: 173 QRVRSLE--------------------------GIPLAQVAAGGAHSFALSLCGT--SFG 204

Query: 326 W-----GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
           W     G     G+        P  V +L  + +  ++ G  HT  ++ DG V+ FG N+
Sbjct: 205 WGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGKVFTFGDNR 264

Query: 381 FGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
            GQLG      +  P+L++   ++ + S+ V CG+ HT A +   G+V  +G
Sbjct: 265 SGQLGYSPTPEKRGPQLVEI--IDGLVSQ-VDCGSYHTLAYVHTTGQVVSFG 313



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 58/185 (31%), Positives = 92/185 (49%), Gaps = 15/185 (8%)

Query: 298 PGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ-GSTDDELSPNCVSSLLGIQIEG 356
           PG  +   A G RHS ++     +L+ G    GQ G+ G+   EL P  + +L  + ++ 
Sbjct: 21  PGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGEL-PEPIQALETLNVDL 79

Query: 357 VAAGLWHTICISSDGDVYAFGGNQFGQLGTGG-DQAETLPRLLDAPSLENVHSKSVSCGA 415
           V+ G  H++ +   G V+A+G    GQLG G   +    P+ +   +L  +    VSCG 
Sbjct: 80  VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGELKEISFTPKKIT--TLNGIKIIQVSCGH 137

Query: 416 RHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV------TIEGCVPRNVACGWWHT 469
            H+  ++ D +VF WG N +GQLGLG    +  PSQ       ++EG     VA G  H+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLG----KEFPSQASPQRVRSLEGIPLAQVAAGGAHS 193

Query: 470 LLLAV 474
             L++
Sbjct: 194 FALSL 198


>gi|356554129|ref|XP_003545401.1| PREDICTED: uncharacterized protein LOC100802464 [Glycine max]
          Length = 1106

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 62/171 (36%), Positives = 97/171 (56%), Gaps = 4/171 (2%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ IACGGRH+A++T  G + ++G    G+ G G   D L P  + +L    IE VA G 
Sbjct: 311 VQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDVLHPKLIEALSNTNIELVACGE 370

Query: 362 WHTICISSDGDVYAFGG--NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
           +H+  ++  GD+Y +G     +G LG G   +  +P+ ++ P LE +H   +SCG  HTA
Sbjct: 371 YHSCAVTLSGDLYTWGNGTYNYGLLGHGNQVSHWVPKRVNGP-LEGIHVSYISCGPWHTA 429

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
           V+   G++F +G   +G LG GD    ++P +V +++G      ACG WHT
Sbjct: 430 VVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESLKGLRTVRAACGVWHT 480



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 82/281 (29%), Positives = 128/281 (45%), Gaps = 46/281 (16%)

Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
           S FP  +     + +  +A GGRH   ++  G+V+ WG    G+LG G    ++   HP 
Sbjct: 297 SLFPKALESAVVLDVQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDVL---HP- 352

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL 328
             IE         ALS  +              ++ +ACG  HS  +T +G L T+G G 
Sbjct: 353 KLIE---------ALSNTN--------------IELVACGEYHSCAVTLSGDLYTWGNGT 389

Query: 329 --YGQCGQGSTDDELSPNCVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLG 385
             YG  G G+      P  V+  L GI +  ++ G WHT  ++S G ++ FG   FG LG
Sbjct: 390 YNYGLLGHGNQVSHWVPKRVNGPLEGIHVSYISCGPWHTAVVTSAGQLFTFGDGTFGALG 449

Query: 386 TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD------------DGKVFCWGWN 433
            G  ++ +LPR  +  SL+ + +   +CG  HTA + +               +F WG  
Sbjct: 450 HGDRKSVSLPR--EVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSVDLFTWGDG 507

Query: 434 KYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAV 474
             G+LG  D   + +P+ V +       VACG  H+L +A+
Sbjct: 508 DKGRLGHVDKEAKLVPTCVALAEHNVCQVACG--HSLTVAL 546



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 123/279 (44%), Gaps = 50/279 (17%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYG--GEGQLGLGSRIRMVSSPHPIP 269
           P L+       I  VA G  H+ A++  G ++ WG G    G LG G+++      H +P
Sbjct: 352 PKLIEALSNTNIELVACGEYHSCAVTLSGDLYTWGNGTYNYGLLGHGNQV-----SHWVP 406

Query: 270 CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
                             VN  GP   + G +V  I+CG  H+AV+T AG L TFG G +
Sbjct: 407 ----------------KRVN--GP---LEGIHVSYISCGPWHTAVVTSAGQLFTFGDGTF 445

Query: 330 GQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI------------SSDGDVYAFG 377
           G  G G       P  V SL G++    A G+WHT  +             S  D++ +G
Sbjct: 446 GALGHGDRKSVSLPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSVDLFTWG 505

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQ 437
               G+LG    +A+ +P  +   +L   +   V+CG   T  +   G+V+  G   YGQ
Sbjct: 506 DGDKGRLGHVDKEAKLVPTCV---ALAEHNVCQVACGHSLTVALTTSGRVYTMGSPVYGQ 562

Query: 438 LGLGDVIDRNIPSQVTIEGCVPRN----VACGWWHTLLL 472
           LG     D  +P  + +EG +  +    +ACG +H  +L
Sbjct: 563 LG-NPQADGKLP--ILVEGKLSESFVEEIACGAYHVAVL 598



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 120/260 (46%), Gaps = 45/260 (17%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G+ ++ ++ G  HT  ++  GQ++ +G G  G LG G R + VS P  +  ++       
Sbjct: 415 GIHVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDR-KSVSLPREVESLK------- 466

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA------------LLTFGWG 327
                         G R     V+  ACG  H+A + +               L T+G G
Sbjct: 467 --------------GLRT----VRA-ACGVWHTAAVVEVMVGNSSSSNCSSVDLFTWGDG 507

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG 387
             G+ G    + +L P CV+ L    +  VA G   T+ +++ G VY  G   +GQLG  
Sbjct: 508 DKGRLGHVDKEAKLVPTCVA-LAEHNVCQVACGHSLTVALTTSGRVYTMGSPVYGQLGN- 565

Query: 388 GDQAE-TLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR 446
             QA+  LP L++   L     + ++CGA H AV+    +V+ WG    G+LG GD  DR
Sbjct: 566 -PQADGKLPILVEG-KLSESFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDR 623

Query: 447 NIPSQV-TIEGCVPRNVACG 465
           N P+ V  ++    +++ACG
Sbjct: 624 NTPTLVEALKDKDVKSIACG 643



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 69/163 (42%), Gaps = 28/163 (17%)

Query: 205 DENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSS 264
           D+     P  V L     +  VA G   T+AL+  G+V+  G    GQLG         +
Sbjct: 516 DKEAKLVPTCVALAEH-NVCQVACGHSLTVALTTSGRVYTMGSPVYGQLG---------N 565

Query: 265 PHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTF 324
           P                A  +  +  EG   ++  ++V+ IACG  H AV+T    + T+
Sbjct: 566 PQ---------------ADGKLPILVEG---KLSESFVEEIACGAYHVAVLTSRTEVYTW 607

Query: 325 GWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI 367
           G G  G+ G G TDD  +P  V +L    ++ +A G   T  I
Sbjct: 608 GKGANGRLGHGDTDDRNTPTLVEALKDKDVKSIACGTTFTAAI 650


>gi|260826736|ref|XP_002608321.1| hypothetical protein BRAFLDRAFT_125491 [Branchiostoma floridae]
 gi|229293672|gb|EEN64331.1| hypothetical protein BRAFLDRAFT_125491 [Branchiostoma floridae]
          Length = 364

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 69/200 (34%), Positives = 103/200 (51%), Gaps = 29/200 (14%)

Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
           G  VK + CG  HS  +T +G + ++G G  GQ G G+T+   +P  + +L G+ +  +A
Sbjct: 163 GEKVKAVCCGKEHSLALTLSGRVFSWGNGSRGQLGHGTTEASNTPQVIEALEGVTMVTIA 222

Query: 359 AGLWHTICISSDGDVYAFGGNQFGQLG----------------------TGGDQAETL-- 394
           AG WH++ +S+ GD+Y +G N+ GQLG                       G + AE L  
Sbjct: 223 AGGWHSVSVSAFGDLYVWGWNEAGQLGLPTSKHKTGPSDHKPSISEMGHQGDNVAEVLVQ 282

Query: 395 --PRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
             P ++D P+ + V    VSCG+RHTA +  DG++  WGW  YGQLG G      +P  V
Sbjct: 283 ATPTIVDMPAGQEV--SKVSCGSRHTAALTRDGQLLTWGWGAYGQLGNGQTERCEVPRAV 340

Query: 453 T-IEGCVPRNVACGWWHTLL 471
              +     NV CG W+ L+
Sbjct: 341 EFFKQRKVTNVWCGPWNVLV 360



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 54/164 (32%), Positives = 81/164 (49%), Gaps = 5/164 (3%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGL-GSRIRMV 262
           G    S  P ++    GV + T+AAGG H++++S  G ++ WG+   GQLGL  S+ +  
Sbjct: 199 GTTEASNTPQVIEALEGVTMVTIAAGGWHSVSVSAFGDLYVWGWNEAGQLGLPTSKHKTG 258

Query: 263 SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVP-GNYVKGIACGGRHSAVITDAGAL 321
            S H     E  +  D  A +    V +      +P G  V  ++CG RH+A +T  G L
Sbjct: 259 PSDHKPSISEMGHQGDNVAEV---LVQATPTIVDMPAGQEVSKVSCGSRHTAALTRDGQL 315

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTI 365
           LT+GWG YGQ G G T+    P  V      ++  V  G W+ +
Sbjct: 316 LTWGWGAYGQLGNGQTERCEVPRAVEFFKQRKVTNVWCGPWNVL 359



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 13/146 (8%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           + CG      +TD G +   G                +P  +   LG +++ V  G  H+
Sbjct: 128 VVCGESTILALTDTGDITMLG-----------DVQSTNPTPLPVYLGEKVKAVCCGKEHS 176

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           + ++  G V+++G    GQLG G  +A   P++++A  LE V   +++ G  H+  ++  
Sbjct: 177 LALTLSGRVFSWGNGSRGQLGHGTTEASNTPQVIEA--LEGVTMVTIAAGGWHSVSVSAF 234

Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPS 450
           G ++ WGWN+ GQLGL     +  PS
Sbjct: 235 GDLYVWGWNEAGQLGLPTSKHKTGPS 260



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 102/254 (40%), Gaps = 59/254 (23%)

Query: 178 GRGSGEEGSKRRRISLAKQTAES-SSSGDENL-----SAFPCLVTLNPGVRIATVAAGGR 231
           GR +G +G K   +   + T  + + +GD  +     S  P  + +  G ++  V  G  
Sbjct: 115 GRWNGPDGVKFTDVVCGESTILALTDTGDITMLGDVQSTNPTPLPVYLGEKVKAVCCGKE 174

Query: 232 HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
           H+LAL+  G+V+ WG G  GQLG G+     ++P  I  +E                   
Sbjct: 175 HSLALTLSGRVFSWGNGSRGQLGHGT-TEASNTPQVIEALE------------------- 214

Query: 292 GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCG------------------ 333
                  G  +  IA GG HS  ++  G L  +GW   GQ G                  
Sbjct: 215 -------GVTMVTIAAGGWHSVSVSAFGDLYVWGWNEAGQLGLPTSKHKTGPSDHKPSIS 267

Query: 334 ----QGSTDDEL----SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLG 385
               QG    E+    +P  V    G ++  V+ G  HT  ++ DG +  +G   +GQLG
Sbjct: 268 EMGHQGDNVAEVLVQATPTIVDMPAGQEVSKVSCGSRHTAALTRDGQLLTWGWGAYGQLG 327

Query: 386 TGGDQAETLPRLLD 399
            G  +   +PR ++
Sbjct: 328 NGQTERCEVPRAVE 341



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 91/225 (40%), Gaps = 51/225 (22%)

Query: 38  LPLTVGSAWRDVCGGGCGFAMAISDSRKLITWG--STDDLGQSYVTSGKHGEIPEPFPLP 95
           LP+ +G   + VC G    ++A++ S ++ +WG  S   LG     +    ++ E     
Sbjct: 158 LPVYLGEKVKAVCCGK-EHSLALTLSGRVFSWGNGSRGQLGHGTTEASNTPQVIEALEGV 216

Query: 96  TEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFL 155
           T  +I  AA GW H V+V+  G++Y WGW E        G L   T   K          
Sbjct: 217 TMVTI--AAGGW-HSVSVSAFGDLYVWGWNEA-------GQLGLPTSKHK---------- 256

Query: 156 TEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLV 215
                                        G    + S+++   +  +  +  + A P +V
Sbjct: 257 ----------------------------TGPSDHKPSISEMGHQGDNVAEVLVQATPTIV 288

Query: 216 TLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR 260
            +  G  ++ V+ G RHT AL+  GQ+  WG+G  GQLG G   R
Sbjct: 289 DMPAGQEVSKVSCGSRHTAALTRDGQLLTWGWGAYGQLGNGQTER 333


>gi|332233496|ref|XP_003265938.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
           [Nomascus leucogenys]
          Length = 1020

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 83/259 (32%), Positives = 120/259 (46%), Gaps = 32/259 (12%)

Query: 214 LVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES 273
           L TLN    +  V+ G  H+LA+   G+V+ WG G EGQLG+G    +  +P  I  +  
Sbjct: 72  LETLN----VDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGELKEISFTPKKITTLN- 126

Query: 274 SYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCG 333
                                    G  +  ++CG  HS  ++    + ++G   +GQ G
Sbjct: 127 -------------------------GIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLG 161

Query: 334 QGST-DDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAE 392
            G     + SP  V SL GI +  VAAG  H+  +S  G  + +G N  GQL   G    
Sbjct: 162 LGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVP 221

Query: 393 TLP-RLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
               + L   +L+N+    +SCGA HTAV+  DGKVF +G N+ GQLG     ++  P  
Sbjct: 222 VQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQL 281

Query: 452 VTIEGCVPRNVACGWWHTL 470
           V I   +   V CG +HTL
Sbjct: 282 VEIIDGLVSQVDCGSYHTL 300



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/232 (28%), Positives = 103/232 (44%), Gaps = 37/232 (15%)

Query: 206 ENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSP 265
           + +S  P  +T   G++I  V+ G  H+LALS   QV+ WG    GQLGLG      +SP
Sbjct: 113 KEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASP 172

Query: 266 HPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFG 325
             +  +E                          G  +  +A GG HS  ++  G   +FG
Sbjct: 173 QRVRSLE--------------------------GIPLAQVAAGGAHSFALSLCGT--SFG 204

Query: 326 W-----GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
           W     G     G+        P  V +L  + +  ++ G  HT  ++ DG V+ FG N+
Sbjct: 205 WGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGKVFTFGDNR 264

Query: 381 FGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
            GQLG      +  P+L++   ++ + S+ V CG+ HT A +   G+V  +G
Sbjct: 265 SGQLGYSPTPEKRGPQLVEI--IDGLVSQ-VDCGSYHTLAYVHTTGQVVSFG 313



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 58/185 (31%), Positives = 92/185 (49%), Gaps = 15/185 (8%)

Query: 298 PGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ-GSTDDELSPNCVSSLLGIQIEG 356
           PG  +   A G RHS ++     +L+ G    GQ G+ G+   EL P  + +L  + ++ 
Sbjct: 21  PGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGEL-PEPIQALETLNVDL 79

Query: 357 VAAGLWHTICISSDGDVYAFGGNQFGQLGTGG-DQAETLPRLLDAPSLENVHSKSVSCGA 415
           V+ G  H++ +   G V+A+G    GQLG G   +    P+ +   +L  +    VSCG 
Sbjct: 80  VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGELKEISFTPKKIT--TLNGIKIIQVSCGH 137

Query: 416 RHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV------TIEGCVPRNVACGWWHT 469
            H+  ++ D +VF WG N +GQLGLG    +  PSQ       ++EG     VA G  H+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLG----KEFPSQASPQRVRSLEGIPLAQVAAGGAHS 193

Query: 470 LLLAV 474
             L++
Sbjct: 194 FALSL 198


>gi|88855032|ref|ZP_01129697.1| hypothetical protein A20C1_04101 [marine actinobacterium PHSC20C1]
 gi|88815560|gb|EAR25417.1| hypothetical protein A20C1_04101 [marine actinobacterium PHSC20C1]
          Length = 524

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 109/378 (28%), Positives = 159/378 (42%), Gaps = 49/378 (12%)

Query: 100 IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQV 159
             + +AG  H +A+   G +Y WG+          G L   + L+  V    S   T   
Sbjct: 51  FTQVSAGINHSLAMGSDGNIYAWGYNSS-------GQLGNNSILNSSVPVLVS---TPDG 100

Query: 160 SPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVT--- 216
              +QVS       +G D   S   GS     +  + T     +G    S+ P LV+   
Sbjct: 101 VTFTQVS-------AGADH--SLAVGSDGNAYAWGRNTDGRLGNGTSTGSSVPLLVSAGA 151

Query: 217 LNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYG 276
           +  GV I+ V AGG H+LA+   G ++ WGY   GQLG G+ +   +S  P+        
Sbjct: 152 VPSGVTISQVMAGGFHSLAVGSNGDIYSWGYNRSGQLGDGTTL---ASSVPL-------- 200

Query: 277 KDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGS 336
           K  + A+  G   S+             ++ G RHS  I   G    +G    GQ G GS
Sbjct: 201 KVSAGAVPAGVTFSQ-------------VSAGDRHSLAIGSNGKTYAWGEARGGQLGIGS 247

Query: 337 TDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPR 396
                +P  VS+  G+    V+AG  H++ + SDG  YA+G N  GQLG     +   P 
Sbjct: 248 ISRTPAPALVSAPAGVSFTQVSAGDLHSLAVGSDGKAYAWGNNDSGQLGNATTTSSLAPV 307

Query: 397 LLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-E 455
           L+    +  +    VS GA H+  I  DG  + WG N  GQLG   +    +P  VT  +
Sbjct: 308 LVSP--MGGLAVTQVSAGADHSLAIGADGNAYAWGLNVNGQLGNNTITTSTVPVMVTAPD 365

Query: 456 GCVPRNVACGWWHTLLLA 473
           G     +  G  H+L  A
Sbjct: 366 GVTFTRIEAGGLHSLTAA 383



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 90/286 (31%), Positives = 130/286 (45%), Gaps = 34/286 (11%)

Query: 219 PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR-----MVSSPHPIPCIES 273
           PGV    V+AG  H+LA+   G ++ WGY   GQLG  S +      +VS+P  +   + 
Sbjct: 47  PGVVFTQVSAGINHSLAMGSDGNIYAWGYNSSGQLGNNSILNSSVPVLVSTPDGVTFTQV 106

Query: 274 SYGKDRSAAL-SRGSV-----NSEG-------PGFRVP----------GNYVKGIACGGR 310
           S G D S A+ S G+      N++G        G  VP          G  +  +  GG 
Sbjct: 107 SAGADHSLAVGSDGNAYAWGRNTDGRLGNGTSTGSSVPLLVSAGAVPSGVTISQVMAGGF 166

Query: 311 HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS---LLGIQIEGVAAGLWHTICI 367
           HS  +   G + ++G+   GQ G G+T     P  VS+     G+    V+AG  H++ I
Sbjct: 167 HSLAVGSNGDIYSWGYNRSGQLGDGTTLASSVPLKVSAGAVPAGVTFSQVSAGDRHSLAI 226

Query: 368 SSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKV 427
            S+G  YA+G  + GQLG G       P L+ AP+   V    VS G  H+  +  DGK 
Sbjct: 227 GSNGKTYAWGEARGGQLGIGSISRTPAPALVSAPA--GVSFTQVSAGDLHSLAVGSDGKA 284

Query: 428 FCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
           + WG N  GQLG         P  V+ + G     V+ G  H+L +
Sbjct: 285 YAWGNNDSGQLGNATTTSSLAPVLVSPMGGLAVTQVSAGADHSLAI 330



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 93/182 (51%), Gaps = 7/182 (3%)

Query: 297 VPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG 356
           +PG     ++ G  HS  +   G +  +G+   GQ G  S  +   P  VS+  G+    
Sbjct: 46  LPGVVFTQVSAGINHSLAMGSDGNIYAWGYNSSGQLGNNSILNSSVPVLVSTPDGVTFTQ 105

Query: 357 VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLEN-VHSKSVSCGA 415
           V+AG  H++ + SDG+ YA+G N  G+LG G     ++P L+ A ++ + V    V  G 
Sbjct: 106 VSAGADHSLAVGSDGNAYAWGRNTDGRLGNGTSTGSSVPLLVSAGAVPSGVTISQVMAGG 165

Query: 416 RHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVP-----RNVACGWWHTL 470
            H+  +  +G ++ WG+N+ GQLG G  +  ++P +V+  G VP       V+ G  H+L
Sbjct: 166 FHSLAVGSNGDIYSWGYNRSGQLGDGTTLASSVPLKVS-AGAVPAGVTFSQVSAGDRHSL 224

Query: 471 LL 472
            +
Sbjct: 225 AI 226



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 95/385 (24%), Positives = 145/385 (37%), Gaps = 47/385 (12%)

Query: 14  VFMWGY-LPGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGST 72
           ++ WGY   G L   S + S + V +    G  +  V  G    ++A+        WG  
Sbjct: 70  IYAWGYNSSGQLGNNSILNSSVPVLVSTPDGVTFTQVSAG-ADHSLAVGSDGNAYAWGRN 128

Query: 73  DD--LGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPS 130
            D  LG    T      +     +P+  +I +  AG  H +AV   G++Y+WG+      
Sbjct: 129 TDGRLGNGTSTGSSVPLLVSAGAVPSGVTISQVMAGGFHSLAVGSNGDIYSWGYNRS--- 185

Query: 131 GRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRR 190
               G L  GT L   V  + S+         SQVS            R S   GS  + 
Sbjct: 186 ----GQLGDGTTLASSVPLKVSAGAVPAGVTFSQVSAGD---------RHSLAIGSNGKT 232

Query: 191 ISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGE 250
            +  +        G  + +  P LV+   GV    V+AG  H+LA+   G+ + WG    
Sbjct: 233 YAWGEARGGQLGIGSISRTPAPALVSAPAGVSFTQVSAGDLHSLAVGSDGKAYAWGNNDS 292

Query: 251 GQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGR 310
           GQLG        ++    P + S  G                      G  V  ++ G  
Sbjct: 293 GQLG-----NATTTSSLAPVLVSPMG----------------------GLAVTQVSAGAD 325

Query: 311 HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
           HS  I   G    +G  + GQ G  +      P  V++  G+    + AG  H++  +SD
Sbjct: 326 HSLAIGADGNAYAWGLNVNGQLGNNTITTSTVPVMVTAPDGVTFTRIEAGGLHSLTAASD 385

Query: 371 GDVYAFGGNQFGQLGTGGDQAETLP 395
            + Y +G N FGQLG G      +P
Sbjct: 386 ENTYTWGANSFGQLGNGTSDGSLVP 410


>gi|91202109|emb|CAJ75169.1| hypothetical protein kuste4407 [Candidatus Kuenenia
           stuttgartiensis]
          Length = 1590

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 145/330 (43%), Gaps = 46/330 (13%)

Query: 148 FERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDEN 207
           FE  ++  +   +  +Q    S  T+   D     E  +   RI    Q +  +  G EN
Sbjct: 499 FEYGTTSGSYSNTTSTQTVSGSADTTVSIDISSLSENTTYYYRI--VAQNSNGTVYGTEN 556

Query: 208 LSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHP 267
              F  L+T+ P +     AAG RH+LAL   G VW WG  G+GQLG             
Sbjct: 557 --NF-MLITVTPKI-----AAGARHSLALKSNGTVWAWGNNGDGQLG------------- 595

Query: 268 IPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWG 327
                    K+R+      +VN+           +  I  G  HS  +   G +  +G  
Sbjct: 596 -----DETTKNRTIPAQVSNVNA-----------ITTIDGGASHSLALKSDGTVWVWGAN 639

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG 387
             GQ G G+   + +P  +S L    I  +A G++H+I + SDG V+AFG N +GQLG G
Sbjct: 640 WDGQLGDGTNTRKTTPVQISGLS--DIISIACGMYHSIALKSDGTVWAFGRNDYGQLGDG 697

Query: 388 GDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
            +     P  +    L +V   +++ G  H   +  DG V+ WG N+ GQLG G   +RN
Sbjct: 698 TNVYRNKP--VQVSGLSDV--IAIAGGDYHCLALKSDGIVWAWGNNESGQLGDGTTTNRN 753

Query: 448 IPSQVTIEGCVPRNVACGWWHTLLLAVPPT 477
            P QV+    V   +A GW H+L L    T
Sbjct: 754 TPVQVSSISNVAA-IARGWVHSLALKSDET 782



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 111/259 (42%), Gaps = 32/259 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR-----MVSSPHPIPCIES---- 273
           I ++A G  H++AL   G VW +G    GQLG G+ +       VS    +  I      
Sbjct: 664 IISIACGMYHSIALKSDGTVWAFGRNDYGQLGDGTNVYRNKPVQVSGLSDVIAIAGGDYH 723

Query: 274 -----------SYGKDRSAALSRGSVNSEGPGFRVPG-NYVKGIACGGRHSAVITDAGAL 321
                      ++G + S  L  G+  +     +V   + V  IA G  HS  +     +
Sbjct: 724 CLALKSDGIVWAWGNNESGQLGDGTTTNRNTPVQVSSISNVAAIARGWVHSLALKSDETV 783

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYA---FGG 378
             +G    GQ G G+T +  +P  V+      I  +A G  +TI + SDG  +    +G 
Sbjct: 784 WAWGSNGSGQLGDGTTTNRTTP--VNITNINNIIAIAGGGGYTIALKSDGTGWTCGEYGW 841

Query: 379 NQFGQLGTG--GDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYG 436
           +     G+   G    T P  +    + +V   +V+ G +H  V+  DG V+ WG N YG
Sbjct: 842 DYSENNGSSYWGYSYRTTPDQV--AGINDV--VAVAGGWQHIVVLKQDGTVWTWGVNWYG 897

Query: 437 QLGLGDVIDRNIPSQVTIE 455
           QLG G   DR+ P QV I 
Sbjct: 898 QLGDGTTTDRDTPVQVDIN 916



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 88/331 (26%), Positives = 127/331 (38%), Gaps = 62/331 (18%)

Query: 52  GGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCV 111
           GG   ++A+     +  WG+  D GQ  +  G +     P  +   + I+  A G  H +
Sbjct: 619 GGASHSLALKSDGTVWVWGANWD-GQ--LGDGTNTRKTTPVQISGLSDIISIACGMYHSI 675

Query: 112 AVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG 171
           A+   G V+ +G  +       +G L  GT    +V+  +      QVS  S V   +GG
Sbjct: 676 ALKSDGTVWAFGRND-------YGQLGDGT----NVYRNKPV----QVSGLSDVIAIAGG 720

Query: 172 TSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGR 231
                  +  G        I  A    ES   GD   +     V ++    +A +A G  
Sbjct: 721 DYHCLALKSDG--------IVWAWGNNESGQLGDGTTTNRNTPVQVSSISNVAAIARGWV 772

Query: 232 HTLALSDIGQVWGWGYGGEGQLGLGS-------------------------RIRMVSSPH 266
           H+LAL     VW WG  G GQLG G+                          I + S   
Sbjct: 773 HSLALKSDETVWAWGSNGSGQLGDGTTTNRTTPVNITNINNIIAIAGGGGYTIALKSDGT 832

Query: 267 PIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGI------ACGGRHSAVITDAGA 320
              C E  YG D S   + GS +  G  +R   + V GI      A G +H  V+   G 
Sbjct: 833 GWTCGE--YGWDYSE--NNGS-SYWGYSYRTTPDQVAGINDVVAVAGGWQHIVVLKQDGT 887

Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
           + T+G   YGQ G G+T D  +P  V   LG
Sbjct: 888 VWTWGVNWYGQLGDGTTTDRDTPVQVDINLG 918


>gi|380029875|ref|XP_003698590.1| PREDICTED: uncharacterized protein LOC100869963 [Apis florea]
          Length = 1858

 Score =  112 bits (279), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 70/211 (33%), Positives = 108/211 (51%), Gaps = 32/211 (15%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            + + +V+ G  HTLA+++ G V+ WG    GQLGLG +I   S+P  I  +      D  
Sbjct: 871  IEVLSVSCGHCHTLAVTNNG-VYAWGSSQFGQLGLG-KILQCSTPELITSLAQEVIIDA- 927

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                            V G Y         HS  +T  G + T+GWG++GQ G G+TD +
Sbjct: 928  ----------------VAGQY---------HSVALTSDGRVFTWGWGVHGQLGHGNTDKK 962

Query: 341  LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
            ++P  V+SLLGI I  + AG  HT+ +S++G +YAFG N FGQLG G +   ++P  +  
Sbjct: 963  MTPTLVTSLLGIVIRFITAGHAHTLALSTEGIIYAFGCNIFGQLGVGNNIKSSVP--IKV 1020

Query: 401  PSLENVHSKSVSCGARHTAVIADDGKVFCWG 431
               E +    ++ G  H   ++   K++ WG
Sbjct: 1021 SLSERI--ILIATGYFHNLAVSCTNKLYIWG 1049



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 68/250 (27%), Positives = 117/250 (46%), Gaps = 33/250 (13%)

Query: 226  VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
            + AG  H +AL   G V+ WG   +G LG G  +    SP  I                 
Sbjct: 822  LCAGFSH-VALIRNGNVYTWGSSVQGCLGTGPSVLRYGSPQVISF--------------- 865

Query: 286  GSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWG--LYGQCGQGSTDDELSP 343
                     F +    V  ++CG  H+  +T+ G    + WG   +GQ G G      +P
Sbjct: 866  ---------FWIMEIEVLSVSCGHCHTLAVTNNG---VYAWGSSQFGQLGLGKILQCSTP 913

Query: 344  NCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSL 403
              ++SL    I    AG +H++ ++SDG V+ +G    GQLG G    +  P L+   SL
Sbjct: 914  ELITSLAQEVIIDAVAGQYHSVALTSDGRVFTWGWGVHGQLGHGNTDKKMTPTLVT--SL 971

Query: 404  ENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVA 463
              +  + ++ G  HT  ++ +G ++ +G N +GQLG+G+ I  ++P +V++   +   +A
Sbjct: 972  LGIVIRFITAGHAHTLALSTEGIIYAFGCNIFGQLGVGNNIKSSVPIKVSLSERIIL-IA 1030

Query: 464  CGWWHTLLLA 473
             G++H L ++
Sbjct: 1031 TGYFHNLAVS 1040



 Score = 51.2 bits (121), Expect = 0.001,   Method: Composition-based stats.
 Identities = 63/223 (28%), Positives = 91/223 (40%), Gaps = 38/223 (17%)

Query: 47   RDVCGGGCGFA-MAISDSRKLITWGSTDD----LGQSYVTSGKHGEIPEPFPLPTEASIV 101
            R +C G   F+ +A+  +  + TWGS+       G S +  G    I   F    E  ++
Sbjct: 820  RPLCAG---FSHVALIRNGNVYTWGSSVQGCLGTGPSVLRYGSPQVIS--FFWIMEIEVL 874

Query: 102  KAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSP 161
              + G  H +AVT  G VY WG  +       FG L  G  L     E  +S   E +  
Sbjct: 875  SVSCGHCHTLAVTNNG-VYAWGSSQ-------FGQLGLGKILQCSTPELITSLAQEVII- 925

Query: 162  RSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTL 217
               V+      +  +DGR    G G  G                  G+ +    P LVT 
Sbjct: 926  -DAVAGQYHSVALTSDGRVFTWGWGVHGQL--------------GHGNTDKKMTPTLVTS 970

Query: 218  NPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR 260
              G+ I  + AG  HTLALS  G ++ +G    GQLG+G+ I+
Sbjct: 971  LLGIVIRFITAGHAHTLALSTEGIIYAFGCNIFGQLGVGNNIK 1013


>gi|296486689|tpg|DAA28802.1| TPA: hect domain and RLD 5 [Bos taurus]
          Length = 963

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 72/213 (33%), Positives = 108/213 (50%), Gaps = 30/213 (14%)

Query: 211 FPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI-- 268
           F C++       I  +  G  H+LALS  G+++ WG   +GQLG+G      S+P  +  
Sbjct: 145 FQCILQEK---NIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVEN 201

Query: 269 ----PCIESSYGKDRSAALSRG------------------SVNSEGPGF--RVPGNYVKG 304
               P ++ S G+  S ALS                    + N E P     +    V+ 
Sbjct: 202 LSGVPLVQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEF 261

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           +ACGG H+A++T +G + TFG G YGQ G  ST +EL P  V+ L+G ++  +A G  HT
Sbjct: 262 LACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHT 321

Query: 365 ICISSD-GDVYAFGGNQFGQLGTGGDQAETLPR 396
           +   SD G V++FG  + GQLG GG + + +PR
Sbjct: 322 LAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIPR 354



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 105/234 (44%), Gaps = 45/234 (19%)

Query: 47  RDVCGGGCG--FAMAISDSRKLITWGSTDD----LGQSYVTSGKHGEIPEPFPLPTEASI 100
           +++    CG   ++A+S   +L  WG   D    +G+ + ++      PE     +   +
Sbjct: 152 KNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTS----TPEIVENLSGVPL 207

Query: 101 VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
           V+ +AG AH +A++  G VY+WG  +C       G L  G       + ++S    E + 
Sbjct: 208 VQISAGEAHSMALSMSGNVYSWGRNDC-------GQLGLG-----HTYNKESPSCIEALD 255

Query: 161 PRSQVSRSSGGTSSGTDGR-------GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPC 213
            +     + GG  +    +       G G+ G          Q   +S+  +      P 
Sbjct: 256 DQKVEFLACGGCHTALLTKSGLVFTFGDGKYG----------QLGHNSTQNELR----PR 301

Query: 214 LVTLNPGVRIATVAAGGRHTLA-LSDIGQVWGWGYGGEGQLGL-GSRIRMVSSP 265
           LVT   G R+  +A G +HTLA +SD G+V+ +G G EGQLG  G+R +++  P
Sbjct: 302 LVTGLVGNRVTQIACGRQHTLAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIPRP 355



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 83/215 (38%), Gaps = 54/215 (25%)

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
           + + C  R  AV+   GA      G+        +D    P C+     ++I  +  G  
Sbjct: 69  RQMCCTRRRLAVLERGGA------GVEVHQLPAGSDGARKPKCIKLGKKMKIHSMDQGEE 122

Query: 363 HTICISSD----------------------------------------GDVYAFGGNQFG 382
           H + +SSD                                        G+++A+G N  G
Sbjct: 123 HMLVLSSDGKPFEYKYSIEHARFQCILQEKNIIQITCGDYHSLALSKGGELFAWGQNLDG 182

Query: 383 QLGTGGDQAET-LPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
           QLG G   A T  P +++  +L  V    +S G  H+  ++  G V+ WG N  GQLGLG
Sbjct: 183 QLGVGRIFASTSTPEIVE--NLSGVPLVQISAGEAHSMALSMSGNVYSWGRNDCGQLGLG 240

Query: 442 DVIDRNIPSQVTIEGCVPRNV---ACGWWHTLLLA 473
              ++  PS   IE    + V   ACG  HT LL 
Sbjct: 241 HTYNKESPS--CIEALDDQKVEFLACGGCHTALLT 273


>gi|195133162|ref|XP_002011008.1| GI16306 [Drosophila mojavensis]
 gi|193906983|gb|EDW05850.1| GI16306 [Drosophila mojavensis]
          Length = 5077

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 91/306 (29%), Positives = 136/306 (44%), Gaps = 80/306 (26%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GG+H LAL+  G+V+ WG G +G+LG G+R+              SY + + 
Sbjct: 4301 VKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRM--------------SYDRPKL 4346

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                            + G  V  IACG  HSA IT +G +LT+G G YG+ G G ++D+
Sbjct: 4347 VE-------------HLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQ 4393

Query: 341  LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V +LLG +   +A  +G   T+CI+ D +V+++G   +G+LG GG     LP  +
Sbjct: 4394 LRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKI 4453

Query: 399  DAP--------------------------------------SLENVHSK----------- 409
            ++                                       S+E+V              
Sbjct: 4454 ESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVEHVRRPKKVAALQGKKI 4513

Query: 410  -SVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWW 467
             S++ G+ H    +D G+VF WG N  GQLG G V     P  V  ++G     V CG  
Sbjct: 4514 ISIATGSLHCVACSDAGEVFTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSA 4573

Query: 468  HTLLLA 473
            HTL L+
Sbjct: 4574 HTLALS 4579



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 139/283 (49%), Gaps = 30/283 (10%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI-----RMVSSPHPIPCIESSY 275
            V+   V +GG+H LAL+  G+V+ WG G +G+LG G+R      R+V +       + + 
Sbjct: 3148 VKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRSTLDKPRLVEALRAKKIRDIAC 3207

Query: 276  GKDRSAALS-RGSVNSEGPG-------------------FRVPGNYVKGIACGGR--HSA 313
            G   SAA+S +G + + G G                     + G  V  +ACG R   + 
Sbjct: 3208 GSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVAALSGRRVIQVACGSRDAQTL 3267

Query: 314  VITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDV 373
             +T+ GA+ ++G G +G+ G+G ++   +P+ +  L GI +  +  G   ++ ++  G+V
Sbjct: 3268 ALTEDGAVFSWGDGDFGKLGRGGSEGSSTPHEIERLSGIGVIQIECGAQFSLALTRAGEV 3327

Query: 374  YAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWN 433
            + +G   + +LG GGDQ    P+ +    L       V+ GA H   + D G+V+ WG N
Sbjct: 3328 WTWGKGDYYRLGHGGDQHVRKPQPI--AGLRGHRVIHVAVGALHCLAVTDAGQVYAWGDN 3385

Query: 434  KYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLAVP 475
             +GQ G G+      P+ V  ++  +   VACG  H++   +P
Sbjct: 3386 DHGQQGSGNTFVNKKPALVIGLDAVIVNRVACGSSHSMAWGLP 3428



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 119/255 (46%), Gaps = 30/255 (11%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            +R   +A G +    +S  G+V+  G G  G+LGLG     V  PH +P +     K   
Sbjct: 3094 LRPIHIAGGSKSLFVVSQDGKVYACGEGTNGRLGLGV-THNVPLPHQLPVLHQYVVK--- 3149

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                + +V+S                 GG+H+  +T  G + ++G G  G+ G G+    
Sbjct: 3150 ----KVAVHS-----------------GGKHALALTLDGKVFSWGEGEDGKLGHGNRSTL 3188

Query: 341  LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
              P  V +L   +I  +A G  H+  ISS G++Y +G  ++G+LG G +  +  P+L+ A
Sbjct: 3189 DKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVAA 3248

Query: 401  PSLENVHSKSVSCGAR--HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGC 457
             S   V    V+CG+R   T  + +DG VF WG   +G+LG G     + P ++  + G 
Sbjct: 3249 LSGRRV--IQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSSTPHEIERLSGI 3306

Query: 458  VPRNVACGWWHTLLL 472
                + CG   +L L
Sbjct: 3307 GVIQIECGAQFSLAL 3321



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 82/260 (31%), Positives = 125/260 (48%), Gaps = 59/260 (22%)

Query: 230 GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPC-IESSYGKDRSAALSRGSV 288
           GRH LA+      + WG G   +LG G           +P  IES         L R   
Sbjct: 655 GRHFLAVDSNFNAYSWGVGDSRRLGHGD-----CHARELPTKIES---------LVR--- 697

Query: 289 NSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS 348
                        VK + CG  +SA IT  G L T+G G YG+ G G++DD+  P  V +
Sbjct: 698 ------------LVKSVYCGCSYSAAITLGGNLYTWGRGTYGRLGHGTSDDQCLPAMVMA 745

Query: 349 LLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA-PSLEN 405
           L   Q+  VA  +G  HT+C++S+G V+A+G   +G+LG G   +  LP+L+D  P ++ 
Sbjct: 746 LKDHQVVDVALGSGDAHTLCLTSEGLVFAWGDGDYGKLGNGSCNSSLLPQLIDCLPRVQR 805

Query: 406 VHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC-VPR---- 460
           V +     GA+ +  ++ +G+++ WG  K   LG   +++RN      ++GC VPR    
Sbjct: 806 VFA-----GAQFSLALSCEGQLYSWG--KASCLG-HQLVERN------VQGCSVPRLITG 851

Query: 461 -------NVACGWWHTLLLA 473
                  +VA G  H L L+
Sbjct: 852 LQHKRIVDVAVGVAHCLALS 871



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 94/324 (29%), Positives = 136/324 (41%), Gaps = 50/324 (15%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V   +G  HC+A+T  GEVY WG  E        G L  G  +  D        L E ++
Sbjct: 4304 VAVNSGGKHCLALTTDGEVYAWGEGE-------DGKLGHGNRMSYD-----RPKLVEHLN 4351

Query: 161  PRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPG 220
              S V+  + G++       SG        ++  K        GD      P LV    G
Sbjct: 4352 GMS-VADIACGSAHSAAITASGHV------LTWGKGRYGRLGHGDSEDQLRPKLVEALLG 4404

Query: 221  VRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
             R   +A  +G   TL ++D   VW WG G  G+LG G      S    +P     Y  +
Sbjct: 4405 YRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGG-----SDGCKLP-----YKIE 4454

Query: 279  RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
              A L                  V  + CG + S  +T +GA+ T+G G + + G GS +
Sbjct: 4455 SLAGLG-----------------VIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVE 4497

Query: 339  DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
                P  V++L G +I  +A G  H +  S  G+V+ +G N  GQLG G   A   PRL+
Sbjct: 4498 HVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVFTWGDNDEGQLGDGTVTAIQRPRLV 4557

Query: 399  DAPSLENVHSKSVSCGARHTAVIA 422
             A  L+  H   V+CG+ HT  ++
Sbjct: 4558 AA--LQGKHIVKVTCGSAHTLALS 4579



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 114/407 (28%), Positives = 164/407 (40%), Gaps = 82/407 (20%)

Query: 27   RSPILSPLVVRL-PLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKH 85
            + P  SP + RL P+ +         GG      +S   K+   G          T+G+ 
Sbjct: 3083 KVPTFSPTISRLRPIHIA--------GGSKSLFVVSQDGKVYACGEG--------TNGRL 3126

Query: 86   G-----EIPEPFPLPT-EASIVKAAA---GWAHCVAVTEGGEVYTWGWKECVPSGRV-FG 135
            G      +P P  LP     +VK  A   G  H +A+T  G+V++WG  E    G++  G
Sbjct: 3127 GLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGE---DGKLGHG 3183

Query: 136  DLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGR--GSGEEGSKRRRISL 193
            + ST   LDK       +   +++   +  S  S   SS  +    G GE G        
Sbjct: 3184 NRST---LDKPRL--VEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGRL------ 3232

Query: 194  AKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGR--HTLALSDIGQVWGWGYGGEG 251
                      GD      P LV    G R+  VA G R   TLAL++ G V+ WG G  G
Sbjct: 3233 --------GHGDNATQLKPKLVAALSGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFG 3284

Query: 252  QLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRH 311
            +LG G      S+PH I                           R+ G  V  I CG + 
Sbjct: 3285 KLGRGGS-EGSSTPHEIE--------------------------RLSGIGVIQIECGAQF 3317

Query: 312  SAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDG 371
            S  +T AG + T+G G Y + G G       P  ++ L G ++  VA G  H + ++  G
Sbjct: 3318 SLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGHRVIHVAVGALHCLAVTDAG 3377

Query: 372  DVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
             VYA+G N  GQ G+G       P L+    L+ V    V+CG+ H+
Sbjct: 3378 QVYAWGDNDHGQQGSGNTFVNKKPALVIG--LDAVIVNRVACGSSHS 3422



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 107/229 (46%), Gaps = 36/229 (15%)

Query: 242  VWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPG 299
            ++GWG+   GQLG   GSRI+      P PC                    E      P 
Sbjct: 4216 IYGWGHNHRGQLGGLEGSRIKT-----PTPC--------------------EALSLLRPV 4250

Query: 300  NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA- 358
                 +A G +    +T  G L   G+G  G+ G G +D    P  + SL  + ++ VA 
Sbjct: 4251 Q----LAGGEQSLFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAV 4306

Query: 359  -AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARH 417
             +G  H + +++DG+VYA+G  + G+LG G   +   P+L++   L  +    ++CG+ H
Sbjct: 4307 NSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRMSYDRPKLVE--HLNGMSVADIACGSAH 4364

Query: 418  TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
            +A I   G V  WG  +YG+LG GD  D+  P  V  + G    ++ACG
Sbjct: 4365 SAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACG 4413



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 89/345 (25%), Positives = 137/345 (39%), Gaps = 60/345 (17%)

Query: 24   LPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDD--LGQSYVT 81
            LP + P+L   VV+         +     G   A+A++   K+ +WG  +D  LG    +
Sbjct: 3136 LPHQLPVLHQYVVK---------KVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRS 3186

Query: 82   SGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGT 141
            +     + E         I   A G +H  A++  GE+YTWG  E    GR  G     T
Sbjct: 3187 TLDKPRLVEAL---RAKKIRDIACGSSHSAAISSQGELYTWGLGE---YGR-LGHGDNAT 3239

Query: 142  GLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGR-GSGEEGSKRRRISLAKQTAES 200
             L   +    S     QV+  S+ +++   T  G     G G+ G       L +  +E 
Sbjct: 3240 QLKPKLVAALSGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGK------LGRGGSEG 3293

Query: 201  SSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR 260
            SS+  E        +    G+ +  +  G + +LAL+  G+VW WG G   +LG G   +
Sbjct: 3294 SSTPHE--------IERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGD-Q 3344

Query: 261  MVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA 320
             V  P PI                         G R  G+ V  +A G  H   +TDAG 
Sbjct: 3345 HVRKPQPIA------------------------GLR--GHRVIHVAVGALHCLAVTDAGQ 3378

Query: 321  LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTI 365
            +  +G   +GQ G G+T     P  V  L  + +  VA G  H++
Sbjct: 3379 VYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVIVNRVACGSSHSM 3423



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 4/154 (2%)

Query: 307 CGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC 366
           C GRH   +       ++G G   + G G       P  + SL+ + ++ V  G  ++  
Sbjct: 653 CEGRHFLAVDSNFNAYSWGVGDSRRLGHGDCHARELPTKIESLVRL-VKSVYCGCSYSAA 711

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           I+  G++Y +G   +G+LG G    + LP ++ A     V   ++  G  HT  +  +G 
Sbjct: 712 ITLGGNLYTWGRGTYGRLGHGTSDDQCLPAMVMALKDHQVVDVALGSGDAHTLCLTSEGL 771

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPR 460
           VF WG   YG+LG G      +P  +    C+PR
Sbjct: 772 VFAWGDGDYGKLGNGSCNSSLLPQLI---DCLPR 802



 Score = 47.4 bits (111), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 82/159 (51%), Gaps = 13/159 (8%)

Query: 319  GALLTFGWGL--YGQCG--QGSTDDELSP-NCVSSLLGIQIEGVAAGLWHTICISSDGDV 373
            GA   +GWG    GQ G  +GS     +P   +S L  +Q+ G    L+    ++ DG +
Sbjct: 4212 GASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLF---AVTPDGKL 4268

Query: 374  YAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSK--SVSCGARHTAVIADDGKVFCWG 431
            +A G    G+LG GG  +  +P LL   SL++V  K  +V+ G +H   +  DG+V+ WG
Sbjct: 4269 FATGYGSGGRLGVGGSDSWAIPTLLG--SLQHVFVKKVAVNSGGKHCLALTTDGEVYAWG 4326

Query: 432  WNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHT 469
              + G+LG G+ +  + P  V  + G    ++ACG  H+
Sbjct: 4327 EGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHS 4365



 Score = 45.8 bits (107), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 59/229 (25%), Positives = 87/229 (37%), Gaps = 42/229 (18%)

Query: 38  LPLTVGSAWRDV--CGGGCGFAMAISDSRKLITWG-----------STDDLGQSYVTSGK 84
           LP  + S  R V     GC ++ AI+    L TWG           S D    + V + K
Sbjct: 688 LPTKIESLVRLVKSVYCGCSYSAAITLGGNLYTWGRGTYGRLGHGTSDDQCLPAMVMALK 747

Query: 85  HGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLD 144
             ++ +          V   +G AH + +T  G V+ WG  +       +G L  G+   
Sbjct: 748 DHQVVD----------VALGSGDAHTLCLTSEGLVFAWGDGD-------YGKLGNGSC-- 788

Query: 145 KDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSG 204
                  SS L + +    +V R   G          G+  S  +   L  Q  E +  G
Sbjct: 789 ------NSSLLPQLIDCLPRVQRVFAGAQFSLALSCEGQLYSWGKASCLGHQLVERNVQG 842

Query: 205 DENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQL 253
                + P L+T     RI  VA G  H LALS  G+++GWG     Q+
Sbjct: 843 ----CSVPRLITGLQHKRIVDVAVGVAHCLALSSSGEIFGWGRNDNQQI 887


>gi|156120637|ref|NP_001095465.1| E3 ISG15--protein ligase HERC5 [Bos taurus]
 gi|151555709|gb|AAI49082.1| HERC5 protein [Bos taurus]
          Length = 958

 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 72/213 (33%), Positives = 108/213 (50%), Gaps = 30/213 (14%)

Query: 211 FPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI-- 268
           F C++       I  +  G  H+LALS  G+++ WG   +GQLG+G      S+P  +  
Sbjct: 140 FQCILQEK---NIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVEN 196

Query: 269 ----PCIESSYGKDRSAALSRG------------------SVNSEGPGF--RVPGNYVKG 304
               P ++ S G+  S ALS                    + N E P     +    V+ 
Sbjct: 197 LSGVPLVQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEF 256

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           +ACGG H+A++T +G + TFG G YGQ G  ST +EL P  V+ L+G ++  +A G  HT
Sbjct: 257 LACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHT 316

Query: 365 ICISSD-GDVYAFGGNQFGQLGTGGDQAETLPR 396
           +   SD G V++FG  + GQLG GG + + +PR
Sbjct: 317 LAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIPR 349



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 105/234 (44%), Gaps = 45/234 (19%)

Query: 47  RDVCGGGCG--FAMAISDSRKLITWGSTDD----LGQSYVTSGKHGEIPEPFPLPTEASI 100
           +++    CG   ++A+S   +L  WG   D    +G+ + ++      PE     +   +
Sbjct: 147 KNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTS----TPEIVENLSGVPL 202

Query: 101 VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
           V+ +AG AH +A++  G VY+WG  +C       G L  G       + ++S    E + 
Sbjct: 203 VQISAGEAHSMALSMSGNVYSWGRNDC-------GQLGLG-----HTYNKESPSCIEALD 250

Query: 161 PRSQVSRSSGGTSSGTDGR-------GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPC 213
            +     + GG  +    +       G G+ G          Q   +S+  +      P 
Sbjct: 251 DQKVEFLACGGCHTALLTKSGLVFTFGDGKYG----------QLGHNSTQNELR----PR 296

Query: 214 LVTLNPGVRIATVAAGGRHTLA-LSDIGQVWGWGYGGEGQLGL-GSRIRMVSSP 265
           LVT   G R+  +A G +HTLA +SD G+V+ +G G EGQLG  G+R +++  P
Sbjct: 297 LVTGLVGNRVTQIACGRQHTLAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIPRP 350



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 83/215 (38%), Gaps = 54/215 (25%)

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
           + + C  R  AV+   GA      G+        +D    P C+     ++I  +  G  
Sbjct: 64  RQMCCTRRRLAVLERGGA------GVEVHQLPAGSDGARKPKCIKLGKKMKIHSMDQGEE 117

Query: 363 HTICISSD----------------------------------------GDVYAFGGNQFG 382
           H + +SSD                                        G+++A+G N  G
Sbjct: 118 HMLVLSSDGKPFEYKYSIEHARFQCILQEKNIIQITCGDYHSLALSKGGELFAWGQNLDG 177

Query: 383 QLGTGGDQAET-LPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
           QLG G   A T  P +++  +L  V    +S G  H+  ++  G V+ WG N  GQLGLG
Sbjct: 178 QLGVGRIFASTSTPEIVE--NLSGVPLVQISAGEAHSMALSMSGNVYSWGRNDCGQLGLG 235

Query: 442 DVIDRNIPSQVTIEGCVPRNV---ACGWWHTLLLA 473
              ++  PS   IE    + V   ACG  HT LL 
Sbjct: 236 HTYNKESPS--CIEALDDQKVEFLACGGCHTALLT 268


>gi|410918052|ref|XP_003972500.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC3-like [Takifugu rubripes]
          Length = 1031

 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 120/255 (47%), Gaps = 32/255 (12%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
           +I  V+ G  H+LA+++ GQV+ WG G EGQLGLG+    V  P  I             
Sbjct: 84  KITLVSCGQAHSLAVNEQGQVFAWGAGEEGQLGLGTTETAVRIPRLIK------------ 131

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD-DE 340
                         R+  + +  + CG +H   ++  G L T+G    GQ G G  +  +
Sbjct: 132 --------------RLCDHRIAQVMCGNQHCIALSKDGQLFTWGQNTSGQLGLGKGEPSK 177

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLP-RLLD 399
           L P  + SL GI +  + AG  H+  +S  G V+ +G N+ GQLG    Q   +P  +  
Sbjct: 178 LFPQPLKSLAGIPLAKITAGGDHSFALSLSGAVFGWGKNKAGQLGLNDIQDRAVPCHIKF 237

Query: 400 APSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCV 458
             S + VH   +SCG  HTA +  DG +F +G   +GQLG G   +  +P +V  + G  
Sbjct: 238 LRSQKVVH---ISCGEEHTAALTKDGGLFTFGDGSWGQLGHGSTANELLPRRVLELMGTE 294

Query: 459 PRNVACGWWHTLLLA 473
              + CG  HTL  A
Sbjct: 295 VSQITCGRHHTLAFA 309



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 117/415 (28%), Positives = 173/415 (41%), Gaps = 74/415 (17%)

Query: 26  QRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKH 85
           +R+P+  P      +  G   +++  GG      + D   + T GS +  GQ  +   K 
Sbjct: 17  ERNPMFEPR--NCNVFTGRGLKEIVCGGQHSVFLLHDG-SVYTCGS-NSCGQ--LGHNKP 70

Query: 86  GEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRV-FGDLSTGTGLD 144
           G  PE         I   + G AH +AV E G+V+ WG  E    G++  G   T   + 
Sbjct: 71  GITPEFVGALDTQKITLVSCGQAHSLAVNEQGQVFAWGAGE---EGQLGLGTTETAVRIP 127

Query: 145 KDVFERQSSFLTEQVSPRSQ--VSRSSGG-------TSSGTDGRGSGEEGSKRRRISLAK 195
           + + +R       QV   +Q  ++ S  G        +SG  G G GE            
Sbjct: 128 R-LIKRLCDHRIAQVMCGNQHCIALSKDGQLFTWGQNTSGQLGLGKGEPSK--------- 177

Query: 196 QTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGL 255
                          FP  +    G+ +A + AGG H+ ALS  G V+GWG    GQLGL
Sbjct: 178 --------------LFPQPLKSLAGIPLAKITAGGDHSFALSLSGAVFGWGKNKAGQLGL 223

Query: 256 GSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVI 315
                                +DR+       + S+          V  I+CG  H+A +
Sbjct: 224 NDI------------------QDRAVPCHIKFLRSQK---------VVHISCGEEHTAAL 256

Query: 316 TDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICIS-SDGDVY 374
           T  G L TFG G +GQ G GST +EL P  V  L+G ++  +  G  HT+  + S G VY
Sbjct: 257 TKDGGLFTFGDGSWGQLGHGSTANELLPRRVLELMGTEVSQITCGRHHTLAFAPSSGGVY 316

Query: 375 AFGGNQFGQLGTGGDQAETLPRLLDAPSLE-NVH--SKSVSCGARHTAVIADDGK 426
           AFG N  GQLGTG   A+  P  L    L  ++H     ++CG  H+ ++  + +
Sbjct: 317 AFGCNSHGQLGTGVLSADKSPYPLKTSFLSGSIHGTVTKITCGGDHSFLLYSNDQ 371



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 50/141 (35%), Positives = 76/141 (53%), Gaps = 5/141 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           +K I CGG+HS  +   G++ T G    GQ G       ++P  V +L   +I  V+ G 
Sbjct: 35  LKEIVCGGQHSVFLLHDGSVYTCGSNSCGQLGHNKPG--ITPEFVGALDTQKITLVSCGQ 92

Query: 362 WHTICISSDGDVYAFGGNQFGQLGTG-GDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            H++ ++  G V+A+G  + GQLG G  + A  +PRL+    L +     V CG +H   
Sbjct: 93  AHSLAVNEQGQVFAWGAGEEGQLGLGTTETAVRIPRLIK--RLCDHRIAQVMCGNQHCIA 150

Query: 421 IADDGKVFCWGWNKYGQLGLG 441
           ++ DG++F WG N  GQLGLG
Sbjct: 151 LSKDGQLFTWGQNTSGQLGLG 171



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 70/156 (44%), Gaps = 7/156 (4%)

Query: 321 LLTFGWGLYGQCGQGSTDDEL-SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN 379
           +L +G    GQ G G   + +  P   +   G  ++ +  G  H++ +  DG VY  G N
Sbjct: 1   MLCWGKAKDGQLGIGVERNPMFEPRNCNVFTGRGLKEIVCGGQHSVFLLHDGSVYTCGSN 60

Query: 380 QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG 439
             GQL  G ++    P  + A   + +    VSCG  H+  + + G+VF WG  + GQLG
Sbjct: 61  SCGQL--GHNKPGITPEFVGALDTQKI--TLVSCGQAHSLAVNEQGQVFAWGAGEEGQLG 116

Query: 440 LGDVIDRNIPSQVTIEGCVPR--NVACGWWHTLLLA 473
           LG         ++    C  R   V CG  H + L+
Sbjct: 117 LGTTETAVRIPRLIKRLCDHRIAQVMCGNQHCIALS 152


>gi|145495055|ref|XP_001433521.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124400639|emb|CAK66124.1| unnamed protein product [Paramecium tetraurelia]
          Length = 447

 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 116/235 (49%), Gaps = 34/235 (14%)

Query: 206 ENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSP 265
           E   A P  +  +   RI  + A   +T+A+ + G+++ WG    G+LG  +  + +  P
Sbjct: 168 EQFVAIPHQLDSDNLPRIVDIYAQHNYTMAIDEEGRLFSWGSNEFGRLGQNAFAKCMKLP 227

Query: 266 HPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFG 325
            PI    +S G  + A L+ G+                       H   I   G L ++G
Sbjct: 228 SPI----TSLGNLKIAKLALGTF----------------------HVLAIDTQGNLYSWG 261

Query: 326 WGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLG 385
            GL GQ G G+++D   PN +SSL  I+   VA G  H++ + ++G VY FG  QFGQLG
Sbjct: 262 RGLQGQLGHGTSNDCSKPNQISSLSSIR--DVACGEAHSMALQNNGSVYVFGSGQFGQLG 319

Query: 386 TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL 440
            G  + +      DAP +  +H + ++CG  H+AV+  +G +F +G N+  QLGL
Sbjct: 320 LGDYKQQ------DAPQMLQIHGEMIACGRHHSAVLTKNGALFMFGNNESSQLGL 368



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 124/257 (48%), Gaps = 37/257 (14%)

Query: 220 GVRIATVAAGGRHTLALSDI---GQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYG 276
           G ++  +A G  H++AL ++    +++ WG     QLG  +  + V+ PH +        
Sbjct: 126 GWQLQKIAVGLDHSVALIEVEEENKIFVWGSNAYQQLGFDASEQFVAIPHQLD------- 178

Query: 277 KDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGS 336
              S  L R                +  I     ++  I + G L ++G   +G+ GQ +
Sbjct: 179 ---SDNLPR----------------IVDIYAQHNYTMAIDEEGRLFSWGSNEFGRLGQNA 219

Query: 337 TDDELS-PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLP 395
               +  P+ ++SL  ++I  +A G +H + I + G++Y++G    GQLG G     + P
Sbjct: 220 FAKCMKLPSPITSLGNLKIAKLALGTFHVLAIDTQGNLYSWGRGLQGQLGHGTSNDCSKP 279

Query: 396 RLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
             +   SL ++  + V+CG  H+  + ++G V+ +G  ++GQLGLGD   ++ P  + I 
Sbjct: 280 NQI--SSLSSI--RDVACGEAHSMALQNNGSVYVFGSGQFGQLGLGDYKQQDAPQMLQIH 335

Query: 456 GCVPRNVACGWWHTLLL 472
           G +   +ACG  H+ +L
Sbjct: 336 GEM---IACGRHHSAVL 349



 Score = 41.6 bits (96), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 53/123 (43%), Gaps = 11/123 (8%)

Query: 7   EEKMERVVFMWGYLPGALPQRSPILSPLVVRLPLTVGS----AWRDVCGGGCGFAMAISD 62
           E + E  +F+WG    A  Q     S   V +P  + S       D+      + MAI +
Sbjct: 144 EVEEENKIFVWG--SNAYQQLGFDASEQFVAIPHQLDSDNLPRIVDIYAQH-NYTMAIDE 200

Query: 63  SRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVY 120
             +L +WGS +   LGQ+     K  ++P P        I K A G  H +A+   G +Y
Sbjct: 201 EGRLFSWGSNEFGRLGQN--AFAKCMKLPSPITSLGNLKIAKLALGTFHVLAIDTQGNLY 258

Query: 121 TWG 123
           +WG
Sbjct: 259 SWG 261



 Score = 40.4 bits (93), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 60/129 (46%), Gaps = 13/129 (10%)

Query: 354 IEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHS---KS 410
           IE +AA   H    S D  V+  G N+ G+LG   + +   P L D  S  + +    + 
Sbjct: 75  IEQIAASKEHWFAWS-DTQVFGCGSNKQGKLGM--NNSVNTPTLFDIFSEASQYGWQLQK 131

Query: 411 VSCGARHTAV---IADDGKVFCWGWNKYGQLGLGDVIDR--NIPSQVTIEGCVPRNVACG 465
           ++ G  H+     + ++ K+F WG N Y QLG  D  ++   IP Q+  +  +PR V   
Sbjct: 132 IAVGLDHSVALIEVEEENKIFVWGSNAYQQLGF-DASEQFVAIPHQLDSDN-LPRIVDIY 189

Query: 466 WWHTLLLAV 474
             H   +A+
Sbjct: 190 AQHNYTMAI 198


>gi|198415420|ref|XP_002129368.1| PREDICTED: similar to regulator of chromosome condensation (RCC1)
           and BTB (POZ) domain containing protein 1 [Ciona
           intestinalis]
          Length = 554

 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 89/267 (33%), Positives = 128/267 (47%), Gaps = 31/267 (11%)

Query: 188 RRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAG-GRHTLALSDIGQVWGWG 246
            +  SL   T+     GD + S  P L+    G +I +++AG G H L L+  G V+ WG
Sbjct: 65  EKVYSLGTNTSGCLGVGDNSSSLEPRLLESFSGQKIISLSAGSGPHVLVLTQDGGVYSWG 124

Query: 247 YGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIA 306
           +    QLG G      +SP   P + S                      R   N V  IA
Sbjct: 125 HNSYMQLGNGG-----TSPGTSPSLLS----------------------RNISNKVVQIA 157

Query: 307 CGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ-IEGVAAGLWHTI 365
           CG  HS  +T  G + T+G+   GQ G GST ++ SP  V++ +G + I  +  G   ++
Sbjct: 158 CGSHHSMALTTEGEVYTWGYNNCGQIGSGSTANQGSPRKVTACIGNKRIIDITCGQTTSL 217

Query: 366 CISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDG 425
           C++  G+VY++G N  GQLG G +  +T P  + A  L+ V    V CG  H   + D+G
Sbjct: 218 CVTDSGEVYSWGYNGNGQLGVGNNVNQTNPCRVAA--LQGVVIAQVVCGYAHALALTDNG 275

Query: 426 KVFCWGWNKYGQLGLGDVIDRNIPSQV 452
            VF WG N YGQLG G+  +   P QV
Sbjct: 276 VVFGWGANSYGQLGSGNKANTCTPLQV 302



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 92/165 (55%), Gaps = 2/165 (1%)

Query: 309 GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICIS 368
           G H  V+T  G + ++G   Y Q G G T    SP+ +S  +  ++  +A G  H++ ++
Sbjct: 108 GPHVLVLTQDGGVYSWGHNSYMQLGNGGTSPGTSPSLLSRNISNKVVQIACGSHHSMALT 167

Query: 369 SDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVF 428
           ++G+VY +G N  GQ+G+G    +  PR + A  + N     ++CG   +  + D G+V+
Sbjct: 168 TEGEVYTWGYNNCGQIGSGSTANQGSPRKVTA-CIGNKRIIDITCGQTTSLCVTDSGEVY 226

Query: 429 CWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
            WG+N  GQLG+G+ +++  P +V  ++G V   V CG+ H L L
Sbjct: 227 SWGYNGNGQLGVGNNVNQTNPCRVAALQGVVIAQVVCGYAHALAL 271



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 71/136 (52%), Gaps = 7/136 (5%)

Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW-HTICISSDGDVYAFGGN 379
           + + G    G  G G     L P  + S  G +I  ++AG   H + ++ DG VY++G N
Sbjct: 67  VYSLGTNTSGCLGVGDNSSSLEPRLLESFSGQKIISLSAGSGPHVLVLTQDGGVYSWGHN 126

Query: 380 QFGQLGTGGDQAETLPRLLDAPSLENVHSK--SVSCGARHTAVIADDGKVFCWGWNKYGQ 437
            + QLG GG    T P LL      N+ +K   ++CG+ H+  +  +G+V+ WG+N  GQ
Sbjct: 127 SYMQLGNGGTSPGTSPSLLS----RNISNKVVQIACGSHHSMALTTEGEVYTWGYNNCGQ 182

Query: 438 LGLGDVIDRNIPSQVT 453
           +G G   ++  P +VT
Sbjct: 183 IGSGSTANQGSPRKVT 198



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 110/276 (39%), Gaps = 58/276 (21%)

Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQV---SPRSQV 165
           H + +T+ G VY+WG      S    G+  T  G    +  R  S    Q+   S  S  
Sbjct: 110 HVLVLTQDGGVYSWGHN----SYMQLGNGGTSPGTSPSLLSRNISNKVVQIACGSHHSMA 165

Query: 166 SRSSGGTSS-GTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
             + G   + G +  G    GS   + S  K TA              C+       RI 
Sbjct: 166 LTTEGEVYTWGYNNCGQIGSGSTANQGSPRKVTA--------------CI----GNKRII 207

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +  G   +L ++D G+V+ WGY G GQLG+G+ +   +     PC        R AAL 
Sbjct: 208 DITCGQTTSLCVTDSGEVYSWGYNGNGQLGVGNNVNQTN-----PC--------RVAALQ 254

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTDDELS 342
                         G  +  + CG  H+  +TD G +  FGWG   YGQ G G+  +  +
Sbjct: 255 --------------GVVIAQVVCGYAHALALTDNGVV--FGWGANSYGQLGSGNKANTCT 298

Query: 343 PNCVSSLLGIQIEGVAAGLWHTICI-SSDGDVYAFG 377
           P  V++ +G  +   A    H+    +  G +Y +G
Sbjct: 299 PLQVATRIGRVVCLAATHYSHSSAARNQSGHIYMWG 334



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 57/116 (49%), Gaps = 16/116 (13%)

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           I  + D  VY+ G N  G LG G + +   PRLL++ S + + S S   G  H  V+  D
Sbjct: 59  IFTTLDEKVYSLGTNTSGCLGVGDNSSSLEPRLLESFSGQKIISLSAGSGP-HVLVLTQD 117

Query: 425 GKVFCWGWNKYGQLGLG--------DVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           G V+ WG N Y QLG G         ++ RNI ++V         +ACG  H++ L
Sbjct: 118 GGVYSWGHNSYMQLGNGGTSPGTSPSLLSRNISNKVV-------QIACGSHHSMAL 166



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/218 (24%), Positives = 90/218 (41%), Gaps = 48/218 (22%)

Query: 86  GEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDK 145
           G  P          +V+ A G  H +A+T  GEVYTWG+  C       G + +G+  ++
Sbjct: 139 GTSPSLLSRNISNKVVQIACGSHHSMALTTEGEVYTWGYNNC-------GQIGSGSTANQ 191

Query: 146 DVFERQSSFLTEQVSPRSQVSRSSGGTSS------------GTDGRGSGEEGSKRRRISL 193
               +    +T  +  +  +  + G T+S            G +G G    G+   + + 
Sbjct: 192 GSPRK----VTACIGNKRIIDITCGQTTSLCVTDSGEVYSWGYNGNGQLGVGNNVNQTN- 246

Query: 194 AKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQL 253
                             PC V    GV IA V  G  H LAL+D G V+GWG    GQL
Sbjct: 247 ------------------PCRVAALQGVVIAQVVCGYAHALALTDNGVVFGWGANSYGQL 288

Query: 254 GLGSR------IRMVSSPHPIPCIESSYGKDRSAALSR 285
           G G++      +++ +    + C+ +++    SAA ++
Sbjct: 289 GSGNKANTCTPLQVATRIGRVVCLAATHYSHSSAARNQ 326


>gi|255544003|ref|XP_002513064.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223548075|gb|EEF49567.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1096

 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 64/171 (37%), Positives = 97/171 (56%), Gaps = 4/171 (2%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ IACG RH+A++T  G + ++G  L G+ G G   D L P  V  L    +E VA G 
Sbjct: 307 VQTIACGRRHAALVTKQGEVFSWGEELGGRLGHGVDSDVLHPKLVDGLKNTNVELVACGE 366

Query: 362 WHTICISSDGDVYAFGGNQF--GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
           +H+  ++  GD+Y +GG+    G LG   + +  +P+ L+ P LE +H  +VSCG  HTA
Sbjct: 367 YHSCAVTLSGDLYTWGGSSHNCGLLGYRNEASNWVPKKLNGP-LEGIHVAAVSCGPWHTA 425

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
           V+   G++F +G   +G LG GD    + P +V +++G      ACG WHT
Sbjct: 426 VVTSSGQLFTFGDGTFGVLGHGDRRSVSTPREVESLKGLRTVRAACGVWHT 476



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 78/260 (30%), Positives = 121/260 (46%), Gaps = 44/260 (16%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G+ +A V+ G  HT  ++  GQ++ +G G  G LG G R R VS+P  +  ++       
Sbjct: 411 GIHVAAVSCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDR-RSVSTPREVESLK------- 462

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDA------------GALLTFGWG 327
                         G R     V+  ACG  H+A + +             G L T+G G
Sbjct: 463 --------------GLRT----VRA-ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDG 503

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG 387
             G+ G G  +  L P CV++L+      VA G   T+ +++ G VY  G   +GQLG  
Sbjct: 504 DKGRLGHGDKESRLVPTCVAALVEPNFCQVACGHSMTVALTTTGHVYTMGSPVYGQLG-- 561

Query: 388 GDQAE-TLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR 446
             QA+  LP  ++    +N   + + CGA H AV+    +V+ WG    G+LG GD  DR
Sbjct: 562 NPQADGKLPVRVEGKLSKNF-VEELDCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDR 620

Query: 447 NIPSQV-TIEGCVPRNVACG 465
           + P+ V  ++    ++V CG
Sbjct: 621 SSPTIVEALKDKQVKSVVCG 640



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 82/295 (27%), Positives = 131/295 (44%), Gaps = 51/295 (17%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSY------G 276
           + T+A G RH   ++  G+V+ WG    G+LG G    ++  P  +  ++++       G
Sbjct: 307 VQTIACGRRHAALVTKQGEVFSWGEELGGRLGHGVDSDVLH-PKLVDGLKNTNVELVACG 365

Query: 277 KDRSAALSRG---------SVNSEGPGFR------VP--------GNYVKGIACGGRHSA 313
           +  S A++           S N    G+R      VP        G +V  ++CG  H+A
Sbjct: 366 EYHSCAVTLSGDLYTWGGSSHNCGLLGYRNEASNWVPKKLNGPLEGIHVAAVSCGPWHTA 425

Query: 314 VITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI------ 367
           V+T +G L TFG G +G  G G      +P  V SL G++    A G+WHT  +      
Sbjct: 426 VVTSSGQLFTFGDGTFGVLGHGDRRSVSTPREVESLKGLRTVRAACGVWHTAAVVEVMVG 485

Query: 368 ------SSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
                  S G ++ +G    G+LG G  ++  +P  + A  L   +   V+CG   T  +
Sbjct: 486 SSSSSNCSSGKLFTWGDGDKGRLGHGDKESRLVPTCVAA--LVEPNFCQVACGHSMTVAL 543

Query: 422 ADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRN----VACGWWHTLLL 472
              G V+  G   YGQLG     D  +P  V +EG + +N    + CG +H  +L
Sbjct: 544 TTTGHVYTMGSPVYGQLG-NPQADGKLP--VRVEGKLSKNFVEELDCGAYHVAVL 595



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 71/138 (51%), Gaps = 6/138 (4%)

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D   P  + S + + ++ +A G  H   ++  G+V+++G    G+LG G D     P+L+
Sbjct: 292 DSFVPKALESAVLLDVQTIACGRRHAALVTKQGEVFSWGEELGGRLGHGVDSDVLHPKLV 351

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKY--GQLGLGDVIDRNIPSQVT--I 454
           D   L+N + + V+CG  H+  +   G ++ WG + +  G LG  +     +P ++   +
Sbjct: 352 DG--LKNTNVELVACGEYHSCAVTLSGDLYTWGGSSHNCGLLGYRNEASNWVPKKLNGPL 409

Query: 455 EGCVPRNVACGWWHTLLL 472
           EG     V+CG WHT ++
Sbjct: 410 EGIHVAAVSCGPWHTAVV 427



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 85/201 (42%), Gaps = 37/201 (18%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDI------------GQVWGWGYGGEG 251
           GD    + P  V    G+R    A G  HT A+ ++            G+++ WG G +G
Sbjct: 447 GDRRSVSTPREVESLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKG 506

Query: 252 QLGLGSRIRMVSSPHPIPCIESSY-----GKDRSAALSR-GSVNSEG-PGF--------- 295
           +LG G +   +        +E ++     G   + AL+  G V + G P +         
Sbjct: 507 RLGHGDKESRLVPTCVAALVEPNFCQVACGHSMTVALTTTGHVYTMGSPVYGQLGNPQAD 566

Query: 296 -----RVPG----NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCV 346
                RV G    N+V+ + CG  H AV+T    + T+G G  G+ G G TDD  SP  V
Sbjct: 567 GKLPVRVEGKLSKNFVEELDCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTIV 626

Query: 347 SSLLGIQIEGVAAGLWHTICI 367
            +L   Q++ V  G   T  I
Sbjct: 627 EALKDKQVKSVVCGTSFTAAI 647


>gi|357126800|ref|XP_003565075.1| PREDICTED: uncharacterized protein LOC100834588 [Brachypodium
           distachyon]
          Length = 1092

 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 61/171 (35%), Positives = 98/171 (57%), Gaps = 4/171 (2%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ I+CGG+H+A+++  G + ++G    G+ G G   D   P  + +L  + IE VA G 
Sbjct: 315 VQNISCGGKHAALVSKQGEIYSWGEESGGRLGHGVDCDVAHPKLIDALTHMNIELVACGE 374

Query: 362 WHTICISSDGDVYAFGGN--QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
           +HT  ++  GD+Y +G    +FG LG G D +  +P+ L  P LE +H  S+SCG  HT 
Sbjct: 375 YHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKKLHGP-LEGIHVSSISCGPFHTV 433

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
           ++   G++F +G   +G LG GD    ++P +V +++G      ACG WHT
Sbjct: 434 IVTSAGQLFTFGDGSFGVLGHGDRESLSVPKEVESLKGLRTVRAACGVWHT 484



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 76/269 (28%), Positives = 125/269 (46%), Gaps = 44/269 (16%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G+ +++++ G  HT+ ++  GQ++ +G G  G LG G R   +S P  +  ++       
Sbjct: 419 GIHVSSISCGPFHTVIVTSAGQLFTFGDGSFGVLGHGDR-ESLSVPKEVESLK------- 470

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDA------------GALLTFGWG 327
                         G R     V+  ACG  H+A + +             G + T+G G
Sbjct: 471 --------------GLRT----VRA-ACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDG 511

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG 387
             G+ G G  +  L P CV++L+      VA G   T+ +++ G VY  G   +GQLG  
Sbjct: 512 DKGRLGHGDKESRLVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGN- 570

Query: 388 GDQAE-TLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR 446
             QA+  LP  ++    +N   + +SCGA H AV+    +V+ WG    G+LG G+  D+
Sbjct: 571 -PQADGMLPARVEGKLHKNF-VEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGNTDDK 628

Query: 447 NIPSQV-TIEGCVPRNVACGWWHTLLLAV 474
           N P+ V  ++    RNV CG   T  + +
Sbjct: 629 NTPTLVEALKDKQVRNVVCGTNFTAAICI 657



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 82/281 (29%), Positives = 123/281 (43%), Gaps = 49/281 (17%)

Query: 210 AFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYG--GEGQLGLGSRIRMVSSPHP 267
           A P L+     + I  VA G  HT A++  G ++ WG G    G LG G+ I      H 
Sbjct: 354 AHPKLIDALTHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDI-----SHW 408

Query: 268 IPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWG 327
           +P                      GP   + G +V  I+CG  H+ ++T AG L TFG G
Sbjct: 409 VP------------------KKLHGP---LEGIHVSSISCGPFHTVIVTSAGQLFTFGDG 447

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI------------SSDGDVYA 375
            +G  G G  +    P  V SL G++    A G+WHT  +             S G ++ 
Sbjct: 448 SFGVLGHGDRESLSVPKEVESLKGLRTVRAACGVWHTAAVVEVMAGNSSSSNCSSGKIFT 507

Query: 376 FGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKY 435
           +G    G+LG G  ++  +P  + A  L   +   V+CG   T  +   G V+  G   Y
Sbjct: 508 WGDGDKGRLGHGDKESRLVPTCVAA--LVEPNFCQVACGHCLTVALTTSGHVYTMGSAVY 565

Query: 436 GQLGLGDVIDRNIPSQVTIEGCVPRN----VACGWWHTLLL 472
           GQLG     D  +P++V  EG + +N    ++CG +H  +L
Sbjct: 566 GQLG-NPQADGMLPARV--EGKLHKNFVEEISCGAYHVAVL 603



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 76/138 (55%), Gaps = 6/138 (4%)

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D L P  +   + + ++ ++ G  H   +S  G++Y++G    G+LG G D     P+L+
Sbjct: 300 DCLVPKPLEFAVRLDVQNISCGGKHAALVSKQGEIYSWGEESGGRLGHGVDCDVAHPKLI 359

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCW--GWNKYGQLGLGDVIDRNIPSQVT--I 454
           DA  L +++ + V+CG  HT  +   G ++ W  G  K+G LG G+ I   +P ++   +
Sbjct: 360 DA--LTHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKKLHGPL 417

Query: 455 EGCVPRNVACGWWHTLLL 472
           EG    +++CG +HT+++
Sbjct: 418 EGIHVSSISCGPFHTVIV 435


>gi|332819950|ref|XP_003310459.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Pan troglodytes]
          Length = 957

 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 81/253 (32%), Positives = 121/253 (47%), Gaps = 34/253 (13%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P +V    GV +A ++AG  H++ALS  G ++ WG    GQLGLG      S  +P    
Sbjct: 115 PQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLG---HTESKDYP---- 167

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
                     +L  G  N +          V+ +ACGG HSA++T  G L TFG G +GQ
Sbjct: 168 ----------SLIEGLDNQK----------VEFVACGGSHSALLTQDGLLFTFGAGKHGQ 207

Query: 332 CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD-GDVYAFGGNQFGQLGTGGDQ 390
            G  ST +EL P  V+ L+  ++  +A G WHT+   SD G V++FG  + GQLG GG +
Sbjct: 208 LGHNSTQNELRPCLVAELVEYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTR 267

Query: 391 AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
            + +P  +   S E +  +S +       +   +  +  W   +   + L     R IP+
Sbjct: 268 DQLMPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWIKKENSYVNL----KRTIPT 323

Query: 451 QVTIEGCVPRNVA 463
               EG V R +A
Sbjct: 324 --LNEGTVKRWIA 334



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 56/158 (35%), Positives = 90/158 (56%), Gaps = 6/158 (3%)

Query: 316 TDAGALLTFGWGLYGQCGQGST-DDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVY 374
           T +G L  +G  L+GQ G G       +P  V  L G+ +  ++AG  H++ +S  G++Y
Sbjct: 87  TPSGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIY 146

Query: 375 AFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNK 434
           ++G N+FGQLG G  +++  P L++   L+N   + V+CG  H+A++  DG +F +G  K
Sbjct: 147 SWGKNEFGQLGLGHTESKDYPSLIEG--LDNQKVEFVACGGSHSALLTQDGLLFTFGAGK 204

Query: 435 YGQLGLGDVIDRNIPSQVT--IEGCVPRNVACGWWHTL 470
           +GQLG     +   P  V   +E  V + +ACG WHTL
Sbjct: 205 HGQLGHNSTQNELRPCLVAELVEYRVTQ-IACGRWHTL 241



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 81/175 (46%), Gaps = 35/175 (20%)

Query: 100 IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQV 159
           + + +AG AH +A++  G +Y+WG  E       FG L  G    KD        L E +
Sbjct: 126 LAQISAGEAHSMALSMSGNIYSWGKNE-------FGQLGLGHTESKDY-----PSLIEGL 173

Query: 160 SPRSQVSRSSGGTSSG---TDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFP 212
             +     + GG+ S     DG     G+G+ G          Q   +S+  +      P
Sbjct: 174 DNQKVEFVACGGSHSALLTQDGLLFTFGAGKHG----------QLGHNSTQNELR----P 219

Query: 213 CLVTLNPGVRIATVAAGGRHTLA-LSDIGQVWGWGYGGEGQLGL-GSRIRMVSSP 265
           CLV      R+  +A G  HTLA +SD+G+V+ +G G +GQLG  G+R +++  P
Sbjct: 220 CLVAELVEYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLP 274


>gi|260832820|ref|XP_002611355.1| hypothetical protein BRAFLDRAFT_120334 [Branchiostoma floridae]
 gi|229296726|gb|EEN67365.1| hypothetical protein BRAFLDRAFT_120334 [Branchiostoma floridae]
          Length = 1187

 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 86/262 (32%), Positives = 130/262 (49%), Gaps = 34/262 (12%)

Query: 212 PCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP 269
           P L+     V I  VA  +GG+H LALS  G+V+ WG   +G+LG G+R    +S     
Sbjct: 378 PTLLESIQHVHIKKVAVNSGGKHCLALSSEGEVFSWGEAEDGKLGHGNR----NSCDRPR 433

Query: 270 CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
            IES  GK+                       V  IA GG HSA IT  G L T+G G Y
Sbjct: 434 VIESLRGKE-----------------------VVDIAAGGAHSACITSTGELFTWGKGRY 470

Query: 330 GQCGQGSTDDELSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTG 387
           G+ G G ++D++ P  V +L G+++  VA  +G   T+CI+ D  V+++G   +G+LG G
Sbjct: 471 GRLGHGDSEDQMKPKLVEALKGVRVIDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRG 530

Query: 388 GDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
           G     +P+ ++A   + V    V CG++ +  +   G V+ WG   Y +LG G      
Sbjct: 531 GSDGCKIPQKVEALIGQGV--VKVECGSQFSVALTKSGCVYTWGKGDYHRLGHGSDDHVR 588

Query: 448 IPSQV-TIEGCVPRNVACGWWH 468
            P +V  ++G    ++A G  H
Sbjct: 589 RPRKVAALQGKNVISIATGSLH 610



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 119/250 (47%), Gaps = 39/250 (15%)

Query: 233 TLALSDIGQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAALSRG---- 286
           TL+    GQ+WGWG+   GQLG   G+++++     P PC   +    R   L  G    
Sbjct: 301 TLSWGGSGQIWGWGHNHRGQLGGVEGAKVKL-----PTPC--DALAALRPVQLIGGEQTL 353

Query: 287 --------------------SVNSEGPGFRVPGNYVKGIAC--GGRHSAVITDAGALLTF 324
                               SV+S      +   ++K +A   GG+H   ++  G + ++
Sbjct: 354 FAVYATGYGAGGRLGIGGTESVSSPTLLESIQHVHIKKVAVNSGGKHCLALSSEGEVFSW 413

Query: 325 GWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQL 384
           G    G+ G G+ +    P  + SL G ++  +AAG  H+ CI+S G+++ +G  ++G+L
Sbjct: 414 GEAEDGKLGHGNRNSCDRPRVIESLRGKEVVDIAAGGAHSACITSTGELFTWGKGRYGRL 473

Query: 385 GTGGDQAETLPRLLDAPSLENVHSKSVSCGA--RHTAVIADDGKVFCWGWNKYGQLGLGD 442
           G G  + +  P+L++A  L+ V    V+CG+    T  I DD  V+ WG   YG+LG G 
Sbjct: 474 GHGDSEDQMKPKLVEA--LKGVRVIDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGG 531

Query: 443 VIDRNIPSQV 452
                IP +V
Sbjct: 532 SDGCKIPQKV 541



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 92/320 (28%), Positives = 137/320 (42%), Gaps = 50/320 (15%)

Query: 101 VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
           V   +G  HC+A++  GEV++WG  E         D   G G +++  +R    + E + 
Sbjct: 392 VAVNSGGKHCLALSSEGEVFSWGEAE---------DGKLGHG-NRNSCDRPR--VIESLR 439

Query: 161 PRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPG 220
            +  V  ++GG  S      +GE        +  K        GD      P LV    G
Sbjct: 440 GKEVVDIAAGGAHSACIT-STGE------LFTWGKGRYGRLGHGDSEDQMKPKLVEALKG 492

Query: 221 VRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
           VR+  VA  +G   TL ++D   VW WG G  G+LG G      S    IP       + 
Sbjct: 493 VRVIDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGG-----SDGCKIP-------QK 540

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
             A + +G V  E               CG + S  +T +G + T+G G Y + G GS D
Sbjct: 541 VEALIGQGVVKVE---------------CGSQFSVALTKSGCVYTWGKGDYHRLGHGSDD 585

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
               P  V++L G  +  +A G  H +  +  G+V+ +G N  GQLG G   A   PRL+
Sbjct: 586 HVRRPRKVAALQGKNVISIATGSLHCVACTDQGEVFTWGDNDEGQLGDGSTSAIPRPRLV 645

Query: 399 DAPSLENVHSKSVSCGARHT 418
            A  L+      V+CG+ H+
Sbjct: 646 AA--LQGKKINRVACGSAHS 663



 Score = 40.8 bits (94), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 5/73 (6%)

Query: 53  GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
           G  F++A++ S  + TWG  D   LG     S  H   P         +++  A G  HC
Sbjct: 555 GSQFSVALTKSGCVYTWGKGDYHRLGHG---SDDHVRRPRKVAALQGKNVISIATGSLHC 611

Query: 111 VAVTEGGEVYTWG 123
           VA T+ GEV+TWG
Sbjct: 612 VACTDQGEVFTWG 624


>gi|357520081|ref|XP_003630329.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355524351|gb|AET04805.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 230

 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 67/177 (37%), Positives = 98/177 (55%), Gaps = 6/177 (3%)

Query: 301 YVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAG 360
           +V  I+ G  H+  +     + ++G G  GQ G G TDD L P  +S+  G  I  V  G
Sbjct: 13  HVLLISAGASHTVALLTGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCG 72

Query: 361 LWHTICISSDG-DVYAFG---GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR 416
             +T+  S  G DVY++G    NQ G+LG G  +   +P+ + A   E +  K V+ GA 
Sbjct: 73  ADYTVARSKSGKDVYSWGCWGRNQNGELGLGTTKDSHVPQKILA--FEGIRIKMVAAGAE 130

Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           H+  I +DG ++ WGW +YG LGLGD  DR IP +V I+G     V+CGW HT+ ++
Sbjct: 131 HSVAITEDGDLYGWGWGRYGNLGLGDTNDRLIPEKVNIDGDKIVMVSCGWRHTISIS 187



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 112/236 (47%), Gaps = 36/236 (15%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
            +  ++AG  HT+AL     V  WG G +GQLG G      +    +P   S++      
Sbjct: 13  HVLLISAGASHTVALLTGNVVCSWGRGEDGQLGHGD-----TDDRLLPTKLSAF------ 61

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG-----QCGQGS 336
                            G  +  + CG  ++   + +G  + + WG +G     + G G+
Sbjct: 62  ----------------DGQDIVSVTCGADYTVARSKSGKDV-YSWGCWGRNQNGELGLGT 104

Query: 337 TDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPR 396
           T D   P  + +  GI+I+ VAAG  H++ I+ DGD+Y +G  ++G LG G      +P 
Sbjct: 105 TKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLGDTNDRLIPE 164

Query: 397 LLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
            ++    + V    VSCG RHT  I+  G ++  GW+KYGQLG GD  D  +P +V
Sbjct: 165 KVNIDGDKIV---MVSCGWRHTISISSSGGLYTHGWSKYGQLGHGDFEDCLVPRKV 217



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/203 (33%), Positives = 94/203 (46%), Gaps = 32/203 (15%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQ---VWG-WGYGGEGQLGLGSRI 259
           GD +    P  ++   G  I +V  G  +T+A S  G+    WG WG    G+LGLG+  
Sbjct: 47  GDTDDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGCWGRNQNGELGLGT-T 105

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAG 319
           +    P  I   E                     G R+     K +A G  HS  IT+ G
Sbjct: 106 KDSHVPQKILAFE---------------------GIRI-----KMVAAGAEHSVAITEDG 139

Query: 320 ALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN 379
            L  +GWG YG  G G T+D L P  V+ + G +I  V+ G  HTI ISS G +Y  G +
Sbjct: 140 DLYGWGWGRYGNLGLGDTNDRLIPEKVN-IDGDKIVMVSCGWRHTISISSSGGLYTHGWS 198

Query: 380 QFGQLGTGGDQAETLPRLLDAPS 402
           ++GQLG G  +   +PR + A S
Sbjct: 199 KYGQLGHGDFEDCLVPRKVQALS 221



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 108/251 (43%), Gaps = 45/251 (17%)

Query: 100 IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQ- 158
           ++  +AG +H VA+  G  V +WG  E        G L  G   D+ +  + S+F  +  
Sbjct: 14  VLLISAGASHTVALLTGNVVCSWGRGE-------DGQLGHGDTDDRLLPTKLSAFDGQDI 66

Query: 159 VSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLN 218
           VS       +   + SG D    G  G + +   L   T + S          P  +   
Sbjct: 67  VSVTCGADYTVARSKSGKDVYSWGCWG-RNQNGELGLGTTKDSH--------VPQKILAF 117

Query: 219 PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
            G+RI  VAAG  H++A+++ G ++GWG+G  G LGLG                     D
Sbjct: 118 EGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLG---------------------D 156

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
            +  L    VN       + G+ +  ++CG RH+  I+ +G L T GW  YGQ G G  +
Sbjct: 157 TNDRLIPEKVN-------IDGDKIVMVSCGWRHTISISSSGGLYTHGWSKYGQLGHGDFE 209

Query: 339 DELSPNCVSSL 349
           D L P  V +L
Sbjct: 210 DCLVPRKVQAL 220



 Score = 38.5 bits (88), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 12/109 (11%)

Query: 47  RDVCGGGCGFAMAISDSR---KLITWG--STDDLGQSYVTSGKHGEIPEPFPLPTEASIV 101
           +D+    CG    ++ S+    + +WG    +  G+  + + K   +P+         I 
Sbjct: 64  QDIVSVTCGADYTVARSKSGKDVYSWGCWGRNQNGELGLGTTKDSHVPQKILAFEGIRIK 123

Query: 102 KAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFER 150
             AAG  H VA+TE G++Y WGW      GR +G+L  G   D+ + E+
Sbjct: 124 MVAAGAEHSVAITEDGDLYGWGW------GR-YGNLGLGDTNDRLIPEK 165


>gi|410920940|ref|XP_003973941.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Takifugu
           rubripes]
          Length = 4822

 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 82/266 (30%), Positives = 136/266 (51%), Gaps = 30/266 (11%)

Query: 212 PCLVTLNPGVRIATVAA--GGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP 269
           P L+      +I  +AA   G+H LALS  G+V+ WG G  G+LG G    +       P
Sbjct: 470 PMLIHSLSSRKIVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDATYLEE-----P 524

Query: 270 CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
            + +++   ++                  G +V  IACG  +SAVIT  G L T+G G Y
Sbjct: 525 TMIAAFNGKQA------------------GKHVVHIACGSTYSAVITIDGELYTWGRGNY 566

Query: 330 GQCGQGSTDDELSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTG 387
           G+ G GS++D+ +P  V++L G+++  VA  +G   T+ ++ +G V+++G   +G+LG G
Sbjct: 567 GRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 626

Query: 388 GDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
           G      P+L++   L+++    V CG++ +  +  DG+V+ WG     +LG G      
Sbjct: 627 GSDGCKTPKLVE--KLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVR 684

Query: 448 IPSQV-TIEGCVPRNVACGWWHTLLL 472
            P  + T++G    +VA G  H L L
Sbjct: 685 FPKLLDTLQGKKVVDVAVGSTHCLAL 710



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 130/306 (42%), Gaps = 80/306 (26%)

Query: 218  NPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
            N  V+   V +GGRH +AL+  G+V+ WG G +G+LG  SR+     P  I  +++   +
Sbjct: 3030 NYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIR 3088

Query: 278  DRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST 337
            D                          IACG  HSA IT +G L ++G G YG+ G G  
Sbjct: 3089 D--------------------------IACGSSHSAAITSSGELYSWGLGEYGRLGHGDN 3122

Query: 338  DDELSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLP 395
              +L P  V  LLG ++  VA G     T+ ++ +G V+++G   FG+LG GG +   +P
Sbjct: 3123 ATQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIP 3182

Query: 396  RLLDAPSLE------------------------------------NVHSKS--------- 410
            + ++  + +                                    +VH +          
Sbjct: 3183 QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRG 3242

Query: 411  -----VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVAC 464
                 V+ GA H   + D G+V+ WG N +GQ G G       P+ V  +EG     VAC
Sbjct: 3243 KKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVAC 3302

Query: 465  GWWHTL 470
            G  H++
Sbjct: 3303 GSSHSV 3308



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 105/357 (29%), Positives = 145/357 (40%), Gaps = 66/357 (18%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V   +G  HC+A++  GEVY+WG  E         D   G G ++   +R    + E + 
Sbjct: 4030 VAVNSGGKHCLALSSEGEVYSWGEAE---------DGKLGHG-NRSPCDRPR--VIESLR 4077

Query: 161  PRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPG 220
                V  ++GG  S      SGE        +  K        GD      P LV    G
Sbjct: 4078 GVEVVDIAAGGAHSACIT-ASGE------LFTWGKGRYGRLGHGDSEDQLKPKLVDALQG 4130

Query: 221  VRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
             R+  VA  +G   TL L+D   VW WG G  G+LG G      S    IP    S    
Sbjct: 4131 HRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGG-----SDGCKIPMKIDS---- 4181

Query: 279  RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
                              + G  V  + CG + S  +T +GA+ T+G G Y + G GS D
Sbjct: 4182 ------------------LTGLGVTKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4223

Query: 339  DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
                P  V  L G ++  +A G  H +C + DG+VY +G N  GQLG G   A   PRL+
Sbjct: 4224 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4283

Query: 399  DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
             A  L+      V+CG+ HT           W  +K    G        +P+QV +E
Sbjct: 4284 AA--LQGKKINRVACGSAHT---------LAWSTSKPTNAG-------KLPAQVPME 4322



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 72/218 (33%), Positives = 94/218 (43%), Gaps = 31/218 (14%)

Query: 204  GDENLSAFPCLVTLNPGVRIATVAAGGR--HTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
            GD      P LV +  G R+  VA G R   TLAL+D G V+ WG G  G+LG G     
Sbjct: 3120 GDNATQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3175

Query: 262  VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
             S    IP                   N E    R+ G  V  I CG + S  +T +G +
Sbjct: 3176 -SEGCNIP------------------QNIE----RLNGQGVCQIECGAQFSLALTKSGVV 3212

Query: 322  LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             T+G G Y + G G+      P  V  L G +I  VA G  H + ++  G VYA+G N  
Sbjct: 3213 WTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDH 3272

Query: 382  GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            GQ G G       P L+    LE      V+CG+ H+ 
Sbjct: 3273 GQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 3308



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/271 (25%), Positives = 129/271 (47%), Gaps = 40/271 (14%)

Query: 225  TVAAGGRHTLALSDIGQVWGWGYGGEGQLG--LGSRIRM------VSSPHPIPCI---ES 273
            T++AGG         G ++GWG+   GQLG   G+++++      +++  P+  I   ++
Sbjct: 3933 TLSAGGS--------GTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQT 3984

Query: 274  SYGKDRSAAL--------------SRGSVNSEGPGFRVPGNYVKGIAC--GGRHSAVITD 317
             +       L                 SV++      +   +++ +A   GG+H   ++ 
Sbjct: 3985 LFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSS 4044

Query: 318  AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
             G + ++G    G+ G G+      P  + SL G+++  +AAG  H+ CI++ G+++ +G
Sbjct: 4045 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWG 4104

Query: 378  GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGA--RHTAVIADDGKVFCWGWNKY 435
              ++G+LG G  + +  P+L+DA  L+      V+CG+    T  + DD  V+ WG   Y
Sbjct: 4105 KGRYGRLGHGDSEDQLKPKLVDA--LQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDY 4162

Query: 436  GQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
            G+LG G      IP ++ ++ G     V CG
Sbjct: 4163 GKLGRGGSDGCKIPMKIDSLTGLGVTKVECG 4193



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 98/224 (43%), Gaps = 49/224 (21%)

Query: 212 PCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP 269
           P LVT   G+++  VA  +G   TLA+++ GQVW WG G  G+LG G             
Sbjct: 580 PMLVTALKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG------------- 626

Query: 270 CIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITDAGALLTFGWG 327
                           GS   + P    ++    +  + CG + S  +T  G + T+G G
Sbjct: 627 ----------------GSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKG 670

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN-QFGQLGT 386
              + G G+ +    P  + +L G ++  VA G  H + ++ DG+V+++G N +     T
Sbjct: 671 DNQRLGHGTDEHVRFPKLLDTLQGKKVVDVAVGSTHCLALTDDGEVHSWGSNDKLQHFDT 730

Query: 387 GGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
             ++ +  P+ L  P L+  H   +SCG          G+ F W
Sbjct: 731 LSNKKQ--PKAL--PGLK--HIVGISCGP---------GQSFAW 759



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 122/274 (44%), Gaps = 44/274 (16%)

Query: 205  DENLSAFPCLVTLNP---GVRIATVAAGGRHTLALSDIG----QVWGWGYGGEGQLG--L 255
            DE+++  P L + N      + AT +   + +  L   G    +V+ WG   + QLG   
Sbjct: 2903 DEDVATVPFLASDNEEEDDDKTATGSLARKKSSGLESAGTIRTKVFVWGLNDKDQLGGLK 2962

Query: 256  GSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVI 315
            GS+I++            S+ +  SA                  N V+ +A G +    +
Sbjct: 2963 GSKIKV-----------PSFSETLSAL-----------------NVVQ-VAGGSKSLFAV 2993

Query: 316  TDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVA--AGLWHTICISSDGD 372
            T  G +   G    G+ G G +   +  P  +++L    ++ VA  +G  H + ++ DG 
Sbjct: 2994 TVEGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGK 3053

Query: 373  VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGW 432
            V+++G    G+LG         PRL++A  L+    + ++CG+ H+A I   G+++ WG 
Sbjct: 3054 VFSWGEGDDGKLGHFSRMNCDKPRLIEA--LKTKRIRDIACGSSHSAAITSSGELYSWGL 3111

Query: 433  NKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACG 465
             +YG+LG GD   +  P  V +  G     VACG
Sbjct: 3112 GEYGRLGHGDNATQLRPKLVKVLLGHRVIQVACG 3145



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 81/310 (26%), Positives = 121/310 (39%), Gaps = 47/310 (15%)

Query: 57   AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEG 116
            AMA++   K+ +WG  DD G+    S  + + P          I   A G +H  A+T  
Sbjct: 3045 AMALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSS 3103

Query: 117  GEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGT 176
            GE+Y+WG  E    GR  G     T L   + +        QV+  S+ +++   T  G 
Sbjct: 3104 GELYSWGLGE---YGR-LGHGDNATQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGL 3159

Query: 177  DGR-GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLA 235
                G G+ G   R              G E  +    +  LN G  +  +  G + +LA
Sbjct: 3160 VFSWGDGDFGKLGR-------------GGSEGCNIPQNIERLN-GQGVCQIECGAQFSLA 3205

Query: 236  LSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF 295
            L+  G VW WG G   +LG G+ +  V  P  +                         G 
Sbjct: 3206 LTKSGVVWTWGKGDYFRLGHGTDVH-VRKPQMV------------------------EGL 3240

Query: 296  RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
            R  G  +  +A G  H   +TD G +  +G   +GQ G G+T     P  V  L G +I 
Sbjct: 3241 R--GKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKIT 3298

Query: 356  GVAAGLWHTI 365
             VA G  H++
Sbjct: 3299 RVACGSSHSV 3308



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 3/78 (3%)

Query: 48  DVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAA 105
           D+    CG  F++A++   ++ TWG  D+    + T  +H   P+         +V  A 
Sbjct: 644 DIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTD-EHVRFPKLLDTLQGKKVVDVAV 702

Query: 106 GWAHCVAVTEGGEVYTWG 123
           G  HC+A+T+ GEV++WG
Sbjct: 703 GSTHCLALTDDGEVHSWG 720



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 5/73 (6%)

Query: 53   GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
            G  F++A++ S  + TWG  D   LG     S  H   P          ++  A G  HC
Sbjct: 4193 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRRPRQVQGLQGKKVIAIATGSLHC 4249

Query: 111  VAVTEGGEVYTWG 123
            V  TE GEVYTWG
Sbjct: 4250 VCCTEDGEVYTWG 4262


>gi|219847608|ref|YP_002462041.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
           9485]
 gi|219541867|gb|ACL23605.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
           DSM 9485]
          Length = 778

 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 93/272 (34%), Positives = 129/272 (47%), Gaps = 39/272 (14%)

Query: 204 GDENLSAFPCLVT-LNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMV 262
           G +  S+ P  V+ L  GV   T+AAGG HT AL+  G VW WG    GQLG GS I  +
Sbjct: 446 GSDTDSSTPVAVSGLASGVE--TIAAGGWHTCALTSSGGVWCWGRNNSGQLGDGSTIYHI 503

Query: 263 SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL 322
            +P  +  + S                            V  IA G  H+  +T +G + 
Sbjct: 504 -TPVAVSGLPSG---------------------------VTAIAAGDYHTCALTGSGGVW 535

Query: 323 TFGWGLYGQCGQGSTDDELSPNCVSSLL-GIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
            +G+ L GQ G G+T D  +P  VS L  G+ +  +AAG +HT  ++S G V+ +G N  
Sbjct: 536 CWGYNLSGQLGDGTTTDRSTPVAVSGLTSGVTV--IAAGRFHTCALTSSGGVWCWGANFD 593

Query: 382 GQLGTGGDQAETLPRLLDA-PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL 440
           GQLG G     T P  +   PS       +++ G  HT  +   G+V+CWG N YGQLG 
Sbjct: 594 GQLGDGTTTNRTTPVAVSGLPS----GVTAIAAGGWHTCALTSSGEVWCWGDNYYGQLGD 649

Query: 441 GDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           G   +R+ P  V+        +A GW HT  L
Sbjct: 650 GTTTNRSTPGAVSGLPSGVTAIAAGWEHTCAL 681



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 115/398 (28%), Positives = 167/398 (41%), Gaps = 51/398 (12%)

Query: 100 IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQV 159
           +   AAG  H  A+T  GEV+ WG+         +G L  GT      + R +      +
Sbjct: 208 VTAIAAGGLHTCALTGSGEVWCWGYN-------YYGQLGDGT----TTYSRSTPAAVGGL 256

Query: 160 SPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
            P    + ++GG  +       G     R         +++ SS    +S  P  VT   
Sbjct: 257 -PSGMTAIAAGGLHTCALMSSGGVWCWGRNDSGQLGDGSDTDSSTPVAVSGLPSGVT--- 312

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESS----- 274
                 +AAG  HT AL+  G+VW WG  G GQLG G+     S+P  +  + S      
Sbjct: 313 -----AIAAGDYHTCALTGSGEVWCWGGNGFGQLGDGTTTAR-STPAAVSGLPSGVETIA 366

Query: 275 -----------------YGKDRSAALSRGSVNSEGPGFRVPG--NYVKGIACGGRHSAVI 315
                            +G++ S  L  G+  +      V G  + V  IA GG H+  +
Sbjct: 367 AGDYHTCALMSSGGVWCWGRNNSGQLGDGTTTARSTPAAVSGLPSGVTAIAAGGLHTCAL 426

Query: 316 TDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYA 375
             +G +  +G    GQ G GS  D  +P  VS L    +E +AAG WHT  ++S G V+ 
Sbjct: 427 MSSGGVWCWGLNNSGQLGDGSDTDSSTPVAVSGLAS-GVETIAAGGWHTCALTSSGGVWC 485

Query: 376 FGGNQFGQLGTGGDQAETLPRLLDA-PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNK 434
           +G N  GQLG G       P  +   PS       +++ G  HT  +   G V+CWG+N 
Sbjct: 486 WGRNNSGQLGDGSTIYHITPVAVSGLPS----GVTAIAAGDYHTCALTGSGGVWCWGYNL 541

Query: 435 YGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
            GQLG G   DR+ P  V+        +A G +HT  L
Sbjct: 542 SGQLGDGTTTDRSTPVAVSGLTSGVTVIAAGRFHTCAL 579



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 131/446 (29%), Positives = 185/446 (41%), Gaps = 67/446 (15%)

Query: 59  AISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKA-AAGWAHCVAVTEGG 117
           A++ S  ++ WG  +D GQ  +  G       P  +    S V A AAG  H  A+T  G
Sbjct: 67  ALTGSGGVMCWGG-NDFGQ--LGDGTPTTRSTPGAVSGLPSGVTAIAAGNYHTCALTGSG 123

Query: 118 EVYTWG--WKECVPSGRVFGDLSTG--TGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTS 173
            V  WG  +   + +G  FG  + G  +GL   V    +          +    SSGG  
Sbjct: 124 GVRCWGANYSGQLGNGLTFGRSTPGAVSGLPSGVTAIAAG------GDHTCALMSSGGVM 177

Query: 174 SGTDGRGS--GEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGR 231
              D      G+  +  RR  +A             +S  P  VT         +AAGG 
Sbjct: 178 CWGDNYYGQLGDGTTTNRRTPVA-------------VSGLPSGVT--------AIAAGGL 216

Query: 232 HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESS----------------- 274
           HT AL+  G+VW WGY   GQLG G+     S+P  +  + S                  
Sbjct: 217 HTCALTGSGEVWCWGYNYYGQLGDGTTTYSRSTPAAVGGLPSGMTAIAAGGLHTCALMSS 276

Query: 275 -----YGKDRSAALSRGSVNSEGPGFRVPG--NYVKGIACGGRHSAVITDAGALLTFGWG 327
                +G++ S  L  GS         V G  + V  IA G  H+  +T +G +  +G  
Sbjct: 277 GGVWCWGRNDSGQLGDGSDTDSSTPVAVSGLPSGVTAIAAGDYHTCALTGSGEVWCWGGN 336

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG 387
            +GQ G G+T    +P  VS L    +E +AAG +HT  + S G V+ +G N  GQLG G
Sbjct: 337 GFGQLGDGTTTARSTPAAVSGLPS-GVETIAAGDYHTCALMSSGGVWCWGRNNSGQLGDG 395

Query: 388 GDQAETLPRLLDA-PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR 446
              A + P  +   PS       +++ G  HT  +   G V+CWG N  GQLG G   D 
Sbjct: 396 TTTARSTPAAVSGLPS----GVTAIAAGGLHTCALMSSGGVWCWGLNNSGQLGDGSDTDS 451

Query: 447 NIPSQVTIEGCVPRNVACGWWHTLLL 472
           + P  V+        +A G WHT  L
Sbjct: 452 STPVAVSGLASGVETIAAGGWHTCAL 477



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 80/254 (31%), Positives = 117/254 (46%), Gaps = 29/254 (11%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLG---------------LGSRIRMVSSPHP 267
           +  +AAG  HT AL+  G VW WGY   GQLG               L S + ++++   
Sbjct: 515 VTAIAAGDYHTCALTGSGGVWCWGYNLSGQLGDGTTTDRSTPVAVSGLTSGVTVIAAGRF 574

Query: 268 IPCIESS------YGKDRSAALSRGSVNSEGPGFRVPG--NYVKGIACGGRHSAVITDAG 319
             C  +S      +G +    L  G+  +      V G  + V  IA GG H+  +T +G
Sbjct: 575 HTCALTSSGGVWCWGANFDGQLGDGTTTNRTTPVAVSGLPSGVTAIAAGGWHTCALTSSG 634

Query: 320 ALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN 379
            +  +G   YGQ G G+T +  +P  VS L    +  +AAG  HT  ++S G+V+ +G N
Sbjct: 635 EVWCWGDNYYGQLGDGTTTNRSTPGAVSGLPS-GVTAIAAGWEHTCALTSSGEVWCWGDN 693

Query: 380 QFGQLGTGGDQAETLPRLLDA-PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
            +GQLG G     + P  +   PS       +++ G  HT  +   G V CWG N  GQL
Sbjct: 694 YYGQLGDGTTTNRSTPGAVSGLPS----GVTAIAAGVYHTCALTGSGGVMCWGNNGDGQL 749

Query: 439 GLGDVIDRNIPSQV 452
           G G  + R  P  V
Sbjct: 750 GDGRPLYRTTPVDV 763



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 107/377 (28%), Positives = 150/377 (39%), Gaps = 60/377 (15%)

Query: 100 IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQS---SFLT 156
           +   AAG AH  A+T  G V  WG       G  FG L  GT   +      S   S +T
Sbjct: 55  VTAIAAGGAHTCALTGSGGVMCWG-------GNDFGQLGDGTPTTRSTPGAVSGLPSGVT 107

Query: 157 EQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVT 216
              +        +G  S G    G+   G     ++  + T  +       +S  P  VT
Sbjct: 108 AIAAGNYHTCALTG--SGGVRCWGANYSGQLGNGLTFGRSTPGA-------VSGLPSGVT 158

Query: 217 LNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYG 276
                    +AAGG HT AL   G V  WG    GQLG G+      +P  +  + S   
Sbjct: 159 --------AIAAGGDHTCALMSSGGVMCWGDNYYGQLGDGTTTNR-RTPVAVSGLPSG-- 207

Query: 277 KDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGS 336
                                    V  IA GG H+  +T +G +  +G+  YGQ G G+
Sbjct: 208 -------------------------VTAIAAGGLHTCALTGSGEVWCWGYNYYGQLGDGT 242

Query: 337 TDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPR 396
           T    S       L   +  +AAG  HT  + S G V+ +G N  GQLG G D   + P 
Sbjct: 243 TTYSRSTPAAVGGLPSGMTAIAAGGLHTCALMSSGGVWCWGRNDSGQLGDGSDTDSSTPV 302

Query: 397 LLDA-PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
            +   PS       +++ G  HT  +   G+V+CWG N +GQLG G    R+ P+ V+  
Sbjct: 303 AVSGLPS----GVTAIAAGDYHTCALTGSGEVWCWGGNGFGQLGDGTTTARSTPAAVSGL 358

Query: 456 GCVPRNVACGWWHTLLL 472
                 +A G +HT  L
Sbjct: 359 PSGVETIAAGDYHTCAL 375



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 87/283 (30%), Positives = 129/283 (45%), Gaps = 32/283 (11%)

Query: 216 TLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES-- 273
           + +P   +  +AAGG HT AL+  G V  WG    GQLG G+     S+P  +  + S  
Sbjct: 48  SFSPLQGVTAIAAGGAHTCALTGSGGVMCWGGNDFGQLGDGTPTTR-STPGAVSGLPSGV 106

Query: 274 ---SYGKDRSAALS-RGSVNSEGPGF------------RVPGNY------VKGIACGGRH 311
              + G   + AL+  G V   G  +              PG        V  IA GG H
Sbjct: 107 TAIAAGNYHTCALTGSGGVRCWGANYSGQLGNGLTFGRSTPGAVSGLPSGVTAIAAGGDH 166

Query: 312 SAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDG 371
           +  +  +G ++ +G   YGQ G G+T +  +P  VS L    +  +AAG  HT  ++  G
Sbjct: 167 TCALMSSGGVMCWGDNYYGQLGDGTTTNRRTPVAVSGLPS-GVTAIAAGGLHTCALTGSG 225

Query: 372 DVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHS--KSVSCGARHTAVIADDGKVFC 429
           +V+ +G N +GQL   GD   T  R   A ++  + S   +++ G  HT  +   G V+C
Sbjct: 226 EVWCWGYNYYGQL---GDGTTTYSRSTPA-AVGGLPSGMTAIAAGGLHTCALMSSGGVWC 281

Query: 430 WGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           WG N  GQLG G   D + P  V+        +A G +HT  L
Sbjct: 282 WGRNDSGQLGDGSDTDSSTPVAVSGLPSGVTAIAAGDYHTCAL 324


>gi|356501930|ref|XP_003519776.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 388

 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 109/402 (27%), Positives = 167/402 (41%), Gaps = 66/402 (16%)

Query: 87  EIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKD 146
             P+     + +SI   A G AH +A+T  G+  +WG       G   G++ + T   K 
Sbjct: 40  HFPQLLHQFSLSSISSLACGGAHVIALTSAGKALSWGRGNSGQLGH--GEVVSNTLYPKA 97

Query: 147 VFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGS-GEEGSKRRRISLAKQTAESSSSGD 205
           V      F+T   +  S     S      T G GS G+ G                  GD
Sbjct: 98  VTSLDGYFITHVSAGWSHSGFVSDTGFVFTCGDGSFGQLGH-----------------GD 140

Query: 206 ENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS-RIRMVSS 264
                 P  V+    + +A VA G RH+L L    QV+G+G G  GQLG+ + R++ V+ 
Sbjct: 141 NASHCSPVKVSCFVDLHVAQVACGMRHSLVLLKGNQVYGFGSGKRGQLGVSNDRVKSVNV 200

Query: 265 PHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTF 324
           P  +   E                          G  + G A  G HSA ++  G + T+
Sbjct: 201 PKVVSGFE--------------------------GVEIVGTAANGDHSAAVSVDGHVYTW 234

Query: 325 GWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQL 384
           G G  G       +D   P C++S L      VA G  H + +S +G+VY  GGN  G L
Sbjct: 235 GRGFKG------FEDAHVPQCLNSSL--NFTKVALGWNHALAMSGEGEVYMLGGNHLGVL 286

Query: 385 GTGGD--QAETLPRLLD-----APSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQ 437
               +   A+  P L +      P L+      ++ GA H+ ++ + G++  WGW ++GQ
Sbjct: 287 SDLQNIGPAKHFPDLREFNLEKVPGLDGTKITDIAAGAEHSVIVTEHGEIKTWGWGEHGQ 346

Query: 438 LGLGDVIDRNIPSQVTIEGCVPR----NVACGWWHTLLLAVP 475
           LGLGD  D+  P  V+++  +       V CG   T  + +P
Sbjct: 347 LGLGDTRDQTSPVTVSLDYDLNEAASIRVFCGSGFTFAVTMP 388



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 4/103 (3%)

Query: 369 SDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVF 428
           S+  V+++G    GQLGT   Q E  P+LL   SL ++   S++CG  H   +   GK  
Sbjct: 16  SEQRVWSWGAGTEGQLGTKILQDEHFPQLLHQFSLSSI--SSLACGGAHVIALTSAGKAL 73

Query: 429 CWGWNKYGQLGLGDVIDRNI-PSQVT-IEGCVPRNVACGWWHT 469
            WG    GQLG G+V+   + P  VT ++G    +V+ GW H+
Sbjct: 74  SWGRGNSGQLGHGEVVSNTLYPKAVTSLDGYFITHVSAGWSHS 116


>gi|350402535|ref|XP_003486520.1| PREDICTED: hypothetical protein LOC100745121 [Bombus impatiens]
          Length = 1865

 Score =  111 bits (278), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 69/211 (32%), Positives = 106/211 (50%), Gaps = 32/211 (15%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V + +V+ G  HTLA+++ G V+ WG    GQLGLG ++   S+P  I  +      D  
Sbjct: 871  VEVLSVSCGHCHTLAVTNNG-VYAWGSSQFGQLGLG-KVLQCSTPELITSLAQEVIIDA- 927

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                            V G Y         HS  +T  G + T+GWG++GQ G G+TD +
Sbjct: 928  ----------------VAGQY---------HSVALTADGRVFTWGWGVHGQLGHGNTDKK 962

Query: 341  LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
            ++P  V+SLLG  I  + AG  HT+ +S++G VYAFG N FGQLG G +   ++P  +  
Sbjct: 963  MTPTLVTSLLGTVIRYITAGHAHTLALSTEGIVYAFGCNIFGQLGVGSNVKSSVPMKVSL 1022

Query: 401  PSLENVHSKSVSCGARHTAVIADDGKVFCWG 431
                 +    ++ G  H   ++   K++ WG
Sbjct: 1023 SERITL----ITTGYFHNLAVSYTNKLYIWG 1049



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 66/250 (26%), Positives = 114/250 (45%), Gaps = 33/250 (13%)

Query: 226  VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
            + AG  H +AL   G V+ WG    G LG+G  +    SP  I                 
Sbjct: 822  LCAGFSH-VALIRNGNVYTWGSSVHGCLGIGPSVLRYGSPQAITF--------------- 865

Query: 286  GSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWG--LYGQCGQGSTDDELSP 343
                     F +    V  ++CG  H+  +T+ G    + WG   +GQ G G      +P
Sbjct: 866  ---------FWLMEVEVLSVSCGHCHTLAVTNNG---VYAWGSSQFGQLGLGKVLQCSTP 913

Query: 344  NCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSL 403
              ++SL    I    AG +H++ +++DG V+ +G    GQLG G    +  P L+   SL
Sbjct: 914  ELITSLAQEVIIDAVAGQYHSVALTADGRVFTWGWGVHGQLGHGNTDKKMTPTLVT--SL 971

Query: 404  ENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVA 463
                 + ++ G  HT  ++ +G V+ +G N +GQLG+G  +  ++P +V++   +   + 
Sbjct: 972  LGTVIRYITAGHAHTLALSTEGIVYAFGCNIFGQLGVGSNVKSSVPMKVSLSERITL-IT 1030

Query: 464  CGWWHTLLLA 473
             G++H L ++
Sbjct: 1031 TGYFHNLAVS 1040



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 64/223 (28%), Positives = 90/223 (40%), Gaps = 38/223 (17%)

Query: 47   RDVCGGGCGFA-MAISDSRKLITWGSTDD----LGQSYVTSGKHGEIPEPFPLPTEASIV 101
            R +C G   F+ +A+  +  + TWGS+      +G S +  G    I   F    E  ++
Sbjct: 820  RPLCAG---FSHVALIRNGNVYTWGSSVHGCLGIGPSVLRYGSPQAIT--FFWLMEVEVL 874

Query: 102  KAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSP 161
              + G  H +AVT  G VY WG  +       FG L  G  L     E  +S   E +  
Sbjct: 875  SVSCGHCHTLAVTNNG-VYAWGSSQ-------FGQLGLGKVLQCSTPELITSLAQEVII- 925

Query: 162  RSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTL 217
               V+      +   DGR    G G  G                  G+ +    P LVT 
Sbjct: 926  -DAVAGQYHSVALTADGRVFTWGWGVHGQL--------------GHGNTDKKMTPTLVTS 970

Query: 218  NPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR 260
              G  I  + AG  HTLALS  G V+ +G    GQLG+GS ++
Sbjct: 971  LLGTVIRYITAGHAHTLALSTEGIVYAFGCNIFGQLGVGSNVK 1013


>gi|54261597|gb|AAH84600.1| LOC495281 protein, partial [Xenopus laevis]
          Length = 1031

 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 80/270 (29%), Positives = 129/270 (47%), Gaps = 38/270 (14%)

Query: 205 DENLSAFP--CLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMV 262
           DE +   P  C   +N  VR   V  G RHT+ + D G V+  G    GQLG        
Sbjct: 2   DEEVVLEPRRCDFFINKNVR--DVGCGSRHTVFVLDDGTVYTCGCNDLGQLG-------- 51

Query: 263 SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL 322
                       + K R      G+++++          +  ++CG  H+  + D G + 
Sbjct: 52  ------------HDKSRKKPDQVGALDAQT---------IVAVSCGEAHTLALNDKGQVF 90

Query: 323 TFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
           ++G   +GQ G    +D +  P  + SL  IQI  VA G  H++ +S + D+Y++G NQ+
Sbjct: 91  SWGHAAHGQIGLSVAEDYIRVPRNIKSLYDIQIVQVACGHHHSLALSKESDIYSWGQNQY 150

Query: 382 GQLGTGGD-QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL 440
           GQLG G + + E+ PR +   SL  +    ++ G  H+  +   G +F WG NK+GQLGL
Sbjct: 151 GQLGLGSEIKKESAPRHIK--SLAGIPFAHIAAGGGHSFALTMSGAIFGWGRNKFGQLGL 208

Query: 441 GDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            D  DR+ P+ + ++      ++ CG  HT
Sbjct: 209 NDETDRSAPALLKSLRSQKIIHICCGEDHT 238



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 83/261 (31%), Positives = 120/261 (45%), Gaps = 36/261 (13%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS-----RI-RMVSSPHPIPCIESSYG 276
           I  V+ G  HTLAL+D GQV+ WG+   GQ+GL       R+ R + S + I  ++ + G
Sbjct: 70  IVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGLSVAEDYIRVPRNIKSLYDIQIVQVACG 129

Query: 277 KDRSAALSRGS--------------VNSEGPGFRVPGNYVKG--------IACGGRHSAV 314
              S ALS+ S              + SE      P  ++K         IA GG HS  
Sbjct: 130 HHHSLALSKESDIYSWGQNQYGQLGLGSEIKKESAP-RHIKSLAGIPFAHIAAGGGHSFA 188

Query: 315 ITDAGALLTFGWGL--YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGD 372
           +T +GA+  FGWG   +GQ G     D  +P  + SL   +I  +  G  HT  ++ +G 
Sbjct: 189 LTMSGAI--FGWGRNKFGQLGLNDETDRSAPALLKSLRSQKIIHICCGEDHTAALTKEGG 246

Query: 373 VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           V+ FG   +GQLG      E  PR      L       ++CG +HT A +   G+++ +G
Sbjct: 247 VFTFGAGGYGQLGHNSTNHEVNPR--KVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFG 304

Query: 432 WNKYGQLGLGDVIDRNIPSQV 452
               GQLG G   +R  P  V
Sbjct: 305 LGGNGQLGTGSTSNRKSPFTV 325



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 153/361 (42%), Gaps = 51/361 (14%)

Query: 37  RLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPT 96
           R    +    RDV G G    + + D   + T G  +DLGQ  +   K  + P+      
Sbjct: 11  RCDFFINKNVRDV-GCGSRHTVFVLDDGTVYTCGC-NDLGQ--LGHDKSRKKPDQVGALD 66

Query: 97  EASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSG-RVFGDLSTGTGLDKDVFERQSSFL 155
             +IV  + G AH +A+ + G+V++WG       G  V  D        K +++ Q   +
Sbjct: 67  AQTIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGLSVAEDYIRVPRNIKSLYDIQIVQV 126

Query: 156 TEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLV 215
                    +S+ S   S G +  G    GS+ ++        ES+    ++L+  P   
Sbjct: 127 ACGHHHSLALSKESDIYSWGQNQYGQLGLGSEIKK--------ESAPRHIKSLAGIP--- 175

Query: 216 TLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSY 275
                   A +AAGG H+ AL+  G ++GWG    GQLGL                    
Sbjct: 176 -------FAHIAAGGGHSFALTMSGAIFGWGRNKFGQLGLNDE----------------- 211

Query: 276 GKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG 335
             DRSA     S+ S+          +  I CG  H+A +T  G + TFG G YGQ G  
Sbjct: 212 -TDRSAPALLKSLRSQK---------IIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 261

Query: 336 STDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFGGNQFGQLGTGGDQAETL 394
           ST+ E++P  V  L+G  +  +A G  HT+  + S G +Y+FG    GQLGTG       
Sbjct: 262 STNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTGSTSNRKS 321

Query: 395 P 395
           P
Sbjct: 322 P 322



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 50/143 (34%), Positives = 68/143 (47%), Gaps = 14/143 (9%)

Query: 338 DDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLP 395
           D+E  L P      +   +  V  G  HT+ +  DG VY  G N  GQL  G D++   P
Sbjct: 2   DEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQL--GHDKSRKKP 59

Query: 396 RLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVID-----RNIPS 450
             + A   + +   +VSCG  HT  + D G+VF WG   +GQ+GL    D     RNI S
Sbjct: 60  DQVGALDAQTI--VAVSCGEAHTLALNDKGQVFSWGHAAHGQIGLSVAEDYIRVPRNIKS 117

Query: 451 QVTIEGCVPRNVACGWWHTLLLA 473
              I+      VACG  H+L L+
Sbjct: 118 LYDIQIV---QVACGHHHSLALS 137



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 74/303 (24%), Positives = 125/303 (41%), Gaps = 50/303 (16%)

Query: 49  VCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAG 106
           +    CG A  +A++D  ++ +WG           +  +  +P       +  IV+ A G
Sbjct: 70  IVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGLSVAEDYIRVPRNIKSLYDIQIVQVACG 129

Query: 107 WAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVS 166
             H +A+++  ++Y+WG  +       +G L  G+ + K+   R    L     P + ++
Sbjct: 130 HHHSLALSKESDIYSWGQNQ-------YGQLGLGSEIKKESAPRHIKSLAG--IPFAHIA 180

Query: 167 RSSGGTSSGT-DGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIAT 225
              G + + T  G   G   +K  ++ L  +T  S+          P L+      +I  
Sbjct: 181 AGGGHSFALTMSGAIFGWGRNKFGQLGLNDETDRSA----------PALLKSLRSQKIIH 230

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
           +  G  HT AL+  G V+ +G GG GQLG  S    V +P  +                 
Sbjct: 231 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEV-NPRKV----------------- 272

Query: 286 GSVNSEGPGFRVPGNYVKGIACGGRHS-AVITDAGALLTFGWGLYGQCGQGSTDDELSPN 344
                    F + G+ V  IACG +H+ A +  +G + +FG G  GQ G GST +  SP 
Sbjct: 273 ---------FELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 323

Query: 345 CVS 347
            V 
Sbjct: 324 TVK 326


>gi|297697477|ref|XP_002825883.1| PREDICTED: RCC1 domain-containing protein 1 isoform 1 [Pongo
           abelii]
          Length = 376

 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 71/230 (30%), Positives = 108/230 (46%), Gaps = 45/230 (19%)

Query: 288 VNSEGPGFR--VPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNC 345
           V+   P +R   P    + +  G  H+ ++  AG + ++G G +GQ G G+ + EL P  
Sbjct: 144 VSPRAPFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRL 203

Query: 346 VSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLG-------------------- 385
           + +L G+ +  VAAG WH++C+S  GD+Y +G N+ GQL                     
Sbjct: 204 LEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLVEDGETVAKDATEL 263

Query: 386 ---------TGGDQ---------AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKV 427
                    TGG +          +  P LLD P      +   SCG+RHTAV+   G++
Sbjct: 264 NEDGSQVKRTGGAEDGAPAPFIAVQPFPALLDLPL--GSDAVKASCGSRHTAVVTRTGEL 321

Query: 428 FCWGWNKYGQLGLGDVIDRNIPSQVTI---EGCVPRNVACGWWHTLLLAV 474
           + WGW KYGQLG  D    + P +V     +    + V CG W+T + AV
Sbjct: 322 YTWGWGKYGQLGHEDTTSLDRPRRVEYFVDKKLQVKAVTCGPWNTYVYAV 371



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 79/173 (45%), Gaps = 15/173 (8%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P L+    G+ +A VAAGG H++ +S+ G ++ WG+   GQL L +R  +V     +   
Sbjct: 201 PRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTR-NLVEDGETVAKD 259

Query: 272 ESSYGKDRSAALSRGSVNSEGPG-----------FRVP-GNYVKGIACGGRHSAVITDAG 319
            +   +D S     G      P              +P G+     +CG RH+AV+T  G
Sbjct: 260 ATELNEDGSQVKRTGGAEDGAPAPFIAVQPFPALLDLPLGSDAVKASCGSRHTAVVTRTG 319

Query: 320 ALLTFGWGLYGQCGQGSTDDELSPNCVSSLL--GIQIEGVAAGLWHTICISSD 370
            L T+GWG YGQ G   T     P  V   +   +Q++ V  G W+T   + +
Sbjct: 320 ELYTWGWGKYGQLGHEDTTSLDRPRRVEYFVDKKLQVKAVTCGPWNTYVYAVE 372



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 87/216 (40%), Gaps = 62/216 (28%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEI--------PEPFPLPTEASIVKA- 103
           G   A+ +  + ++ +WG            G+HG++         EP  L     +V A 
Sbjct: 166 GAEHALLLDAAGQVFSWGG-----------GRHGQLGHGTLEAELEPRLLEALQGLVMAE 214

Query: 104 -AAGWAHCVAVTEGGEVYTWGWKE----CVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQ 158
            AAG  H V V+E G++Y WGW E     +P+  +  D   G  + KD         TE 
Sbjct: 215 VAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLVED---GETVAKDA--------TEL 263

Query: 159 VSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLN 218
               SQV R+           G  E+G+    I+               +  FP L+ L 
Sbjct: 264 NEDGSQVKRT-----------GGAEDGAPAPFIA---------------VQPFPALLDLP 297

Query: 219 PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG 254
            G      + G RHT  ++  G+++ WG+G  GQLG
Sbjct: 298 LGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLG 333


>gi|444911351|ref|ZP_21231526.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444718109|gb|ELW58925.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 1085

 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 121/408 (29%), Positives = 177/408 (43%), Gaps = 77/408 (18%)

Query: 69  WGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECV 128
           WG T+D G S + +        P PL  E    + AAG AH + +   G V+ WG     
Sbjct: 18  WG-TEDAGPSRIEAAL-----TPPPLGHE----QVAAGAAHSLMLRSDGTVWAWG----- 62

Query: 129 PSGRVFGDLSTGTGLDKDVFERQSSF---LTEQVSPRSQVSRSSGGTSSGTDGRGSGEEG 185
                +G L  GTG+ + +  R  S    +   V  +  ++  S GT         G+ G
Sbjct: 63  --DNTYGQLGDGTGITQRLPVRVQSLDSVVALAVGYQHSLALRSDGTVWAWGDNFFGQLG 120

Query: 186 SKRRRISLAKQTAESSSSGDENLSAFPCLV-TLNPGVRIATVAAGGRHTLALSDIGQVWG 244
                             G +  S  P  V +LN    +  +AAG  H+LAL   G VW 
Sbjct: 121 D-----------------GSDAQSQVPIQVWSLN---GVVAIAAGDHHSLALLSDGSVWA 160

Query: 245 WGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKG 304
           WGY   GQLG       V+SP P+       G     ALS GS                 
Sbjct: 161 WGYNAHGQLG---DDTTVASPLPVQV----QGLSGVVALSAGST---------------- 197

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
                 HS  +   G +  +G   YGQ G GS+ +  +P  VSSL G  ++ V AG +H+
Sbjct: 198 ------HSLAVLSDGKVKAWGDNYYGQLGDGSSTERWTPVLVSSLTG--VKSVVAGTFHS 249

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           + + SDG V A+G N  GQLG        +P ++  P L NV  ++++ G+ H+  +  D
Sbjct: 250 LALCSDGTVRAWGENGSGQLGISSTTRRPVPVVV--PGLTNV--QALAAGSAHSLALRSD 305

Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           G V  WG N +GQ+G G +  +  P QV   G + +++A G  H+L +
Sbjct: 306 GTVRAWGNNDHGQVGNGTISQQLTPVQVPGVGRM-KSIAAGGAHSLAM 352



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 112/396 (28%), Positives = 165/396 (41%), Gaps = 71/396 (17%)

Query: 89   PEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDK--- 145
            P P  +P  +++   AAG +H +AV   G V+ WG           G+L  GTGL +   
Sbjct: 728  PVPVQVPGPSAMKGVAAGGSHSLAVRSDGTVWAWGNNGS-------GELGDGTGLQRPRP 780

Query: 146  -DVFERQSSFLTEQVSPRSQVSRSS------GGTSSGTDGRGSGEEGSKRRRISLAKQTA 198
              V    S+      +  S   +S       GG S G  G G+G       R+S      
Sbjct: 781  VQVQGLGSAVAVSAGTNHSLAVQSDGTVWAWGGNSQGQLGDGTGITRYVPVRVS------ 834

Query: 199  ESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQL----- 253
                              LN    +  V+AG  H+LAL   G VW WGY   GQL     
Sbjct: 835  -----------------GLN---GVMAVSAGSAHSLALRSDGTVWAWGYNFYGQLGDATS 874

Query: 254  ----------GLGSRIRMVSSPHPIPCIES-----SYGKDRSAALSRGSVNSEGPGFRVP 298
                      GL   + + +  H    + S     ++G +    L  G+     P  +VP
Sbjct: 875  TQRLVPIQVPGLTGVVSIAAGTHHSLAVRSDGTVWAWGYNFYGQLGDGTKIQRSPPVQVP 934

Query: 299  GNY-VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGV 357
            G   +  +A G  HS  +   G +  +G+  +GQ G G+T   L P  +SS  G+     
Sbjct: 935  GLAGMVSVAAGTYHSLAVHSNGTVWAWGYNNHGQLGDGTTTQRLLPVPISSSSGVI---A 991

Query: 358  AAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARH 417
            AA  WH++ + +DG V+ +G N   QLG G     T  R +  PS      +S+S GA H
Sbjct: 992  AAANWHSLVVRTDGTVWGWGSNNASQLGDG----STSDRKMPTPSSVPNGVRSISSGANH 1047

Query: 418  TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT 453
            +  +  DG V+ WG+   GQLG G +  R +P+ V+
Sbjct: 1048 SLALRSDGTVWAWGFGNSGQLGDGVMSMRLVPAGVS 1083



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 118/423 (27%), Positives = 173/423 (40%), Gaps = 72/423 (17%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
           G G+++A+     +  WG     G   +  G       P   P  + +V  AAG +H +A
Sbjct: 595 GNGYSLAVDAQGSVWAWGYN---GMGQLGDGTTTPRVTPTQAPALSGVVALAAGDSHSLA 651

Query: 113 VTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDV---FERQSSFLTEQVSPRSQVSRSS 169
           +   G  + WG       G   G L   T L++         +  +         +   +
Sbjct: 652 LRADGVAWAWG-------GNDQGQLGDATTLERSTPAAVPGLAHVVALAAGNAHSLVLHA 704

Query: 170 GGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPG-VRIATVAA 228
            GTSS       G+ G                  G   L   P  V   PG   +  VAA
Sbjct: 705 DGTSSSWGNNAYGQLGD-----------------GTSTLHPVPVQV---PGPSAMKGVAA 744

Query: 229 GGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSV 288
           GG H+LA+   G VW WG  G G+LG G+ ++    P P+                    
Sbjct: 745 GGSHSLAVRSDGTVWAWGNNGSGELGDGTGLQR---PRPVQV------------------ 783

Query: 289 NSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS 348
             +G G  V       ++ G  HS  +   G +  +G    GQ G G+      P  VS 
Sbjct: 784 --QGLGSAV------AVSAGTNHSLAVQSDGTVWAWGGNSQGQLGDGTGITRYVPVRVSG 835

Query: 349 LLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHS 408
           L G+    V+AG  H++ + SDG V+A+G N +GQLG        +P  +  P L  V  
Sbjct: 836 LNGVM--AVSAGSAHSLALRSDGTVWAWGYNFYGQLGDATSTQRLVP--IQVPGLTGV-- 889

Query: 409 KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWW 467
            S++ G  H+  +  DG V+ WG+N YGQLG G  I R+ P QV  + G V  +VA G +
Sbjct: 890 VSIAAGTHHSLAVRSDGTVWAWGYNFYGQLGDGTKIQRSPPVQVPGLAGMV--SVAAGTY 947

Query: 468 HTL 470
           H+L
Sbjct: 948 HSL 950



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 121/407 (29%), Positives = 182/407 (44%), Gaps = 59/407 (14%)

Query: 91  PFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFER 150
           P  +P  A +   ++   H +AV+  G V+ WG+     SGR  GD +T + L       
Sbjct: 480 PVQVPGLAGVDTVSSMHQHSLAVSRDGTVWAWGFNG---SGR-LGDGTTLSRLTPVQVPG 535

Query: 151 QSSFLTEQVSPRSQVSRSSGGT--SSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENL 208
            SS +         ++  + GT  + G +  G+  +G+  RR+S                
Sbjct: 536 LSSMVAVAAGSTHSLALRADGTVWAWGDNSNGALGDGTTLRRLS---------------- 579

Query: 209 SAFPCLVTLNPGVR-IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS---RIRMVSS 264
              P  V   PG+  +  +AAG  ++LA+   G VW WGY G GQLG G+   R+    +
Sbjct: 580 ---PVQV---PGLSGVVALAAGNGYSLAVDAQGSVWAWGYNGMGQLGDGTTTPRVTPTQA 633

Query: 265 PHPIPCIESSYGKDRSAALSRGSV------NSEG-----------PGFRVPG-NYVKGIA 306
           P     +  + G   S AL    V      N +G               VPG  +V  +A
Sbjct: 634 PALSGVVALAAGDSHSLALRADGVAWAWGGNDQGQLGDATTLERSTPAAVPGLAHVVALA 693

Query: 307 CGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC 366
            G  HS V+   G   ++G   YGQ G G++   L P  V       ++GVAAG  H++ 
Sbjct: 694 AGNAHSLVLHADGTSSSWGNNAYGQLGDGTS--TLHPVPVQVPGPSAMKGVAAGGSHSLA 751

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           + SDG V+A+G N  G+LG G       PR +    L +  + +VS G  H+  +  DG 
Sbjct: 752 VRSDGTVWAWGNNGSGELGDG--TGLQRPRPVQVQGLGS--AVAVSAGTNHSLAVQSDGT 807

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
           V+ WG N  GQLG G  I R +P +V+ + G +   V+ G  H+L L
Sbjct: 808 VWAWGGNSQGQLGDGTGITRYVPVRVSGLNGVMA--VSAGSAHSLAL 852



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 83/258 (32%), Positives = 123/258 (47%), Gaps = 32/258 (12%)

Query: 219 PGV-RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG-------------LGSRIRM--- 261
           PGV R+ ++AAGG H+LA+   G  W WG   +GQLG             LG RIRM   
Sbjct: 334 PGVGRMKSIAAGGAHSLAMRADGITWAWGDDSQGQLGDGQSSQQLRPARVLGQRIRMPLG 393

Query: 262 VSSPHPIPCIES----SYGKDRSAALSRGSVNSEGPGFRVPGNY-VKGIACGGRHSAVIT 316
             + H +         ++G + +  L  G+        +VPG   V  ++    HS    
Sbjct: 394 TGNRHSLALHADGTVWAWGVNTAGQLGDGTDLPRTLPVQVPGLAGVHTLSATTSHSLAAR 453

Query: 317 DAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAF 376
             G +  +G   +GQ G G+T   L P  V  L G  ++ V++   H++ +S DG V+A+
Sbjct: 454 ADGTVWAWGDNAFGQLGDGTTTQRLLPVQVPGLAG--VDTVSSMHQHSLAVSRDGTVWAW 511

Query: 377 GGNQFGQLGTGGDQAETLPRL--LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNK 434
           G N  G+LG G     TL RL  +  P L ++   +V+ G+ H+  +  DG V+ WG N 
Sbjct: 512 GFNGSGRLGDG----TTLSRLTPVQVPGLSSM--VAVAAGSTHSLALRADGTVWAWGDNS 565

Query: 435 YGQLGLGDVIDRNIPSQV 452
            G LG G  + R  P QV
Sbjct: 566 NGALGDGTTLRRLSPVQV 583



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 118/424 (27%), Positives = 178/424 (41%), Gaps = 59/424 (13%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
           G   ++A+     +  WG+ D      V +G   +   P  +P    +   AAG AH +A
Sbjct: 295 GSAHSLALRSDGTVRAWGNND---HGQVGNGTISQQLTPVQVPGVGRMKSIAAGGAHSLA 351

Query: 113 VTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGT 172
           +   G   TW W          GD S G      + + QSS   +Q+ P ++V       
Sbjct: 352 MRADG--ITWAW----------GDDSQG-----QLGDGQSS---QQLRP-ARVLGQRIRM 390

Query: 173 SSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVR-IATVAAGGR 231
             GT  R S    +     +    TA     G +     P  V   PG+  + T++A   
Sbjct: 391 PLGTGNRHSLALHADGTVWAWGVNTAGQLGDGTDLPRTLPVQV---PGLAGVHTLSATTS 447

Query: 232 HTLALSDIGQVWGWGYGGEGQLGLGSR--------------IRMVSSPHPIPCIES---- 273
           H+LA    G VW WG    GQLG G+               +  VSS H      S    
Sbjct: 448 HSLAARADGTVWAWGDNAFGQLGDGTTTQRLLPVQVPGLAGVDTVSSMHQHSLAVSRDGT 507

Query: 274 --SYGKDRSAALSRGSVNSEGPGFRVPG-NYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
             ++G + S  L  G+  S     +VPG + +  +A G  HS  +   G +  +G    G
Sbjct: 508 VWAWGFNGSGRLGDGTTLSRLTPVQVPGLSSMVAVAAGSTHSLALRADGTVWAWGDNSNG 567

Query: 331 QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
             G G+T   LSP  V  L G  +  +AAG  +++ + + G V+A+G N  GQLG G   
Sbjct: 568 ALGDGTTLRRLSPVQVPGLSG--VVALAAGNGYSLAVDAQGSVWAWGYNGMGQLGDG--- 622

Query: 391 AETLPRL--LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNI 448
             T PR+    AP+L  V   +++ G  H+  +  DG  + WG N  GQLG    ++R+ 
Sbjct: 623 -TTTPRVTPTQAPALSGV--VALAAGDSHSLALRADGVAWAWGGNDQGQLGDATTLERST 679

Query: 449 PSQV 452
           P+ V
Sbjct: 680 PAAV 683



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 104/256 (40%), Gaps = 32/256 (12%)

Query: 9    KMERVVFMWGY-LPGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLI 67
            + +  V+ WGY   G L   +     + +++P   G         G   ++A+     + 
Sbjct: 853  RSDGTVWAWGYNFYGQLGDATSTQRLVPIQVPGLTGVV---SIAAGTHHSLAVRSDGTVW 909

Query: 68   TWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKEC 127
             WG  +  GQ  +  G   +   P  +P  A +V  AAG  H +AV   G V+ WG+   
Sbjct: 910  AWG-YNFYGQ--LGDGTKIQRSPPVQVPGLAGMVSVAAGTYHSLAVHSNGTVWAWGYNNH 966

Query: 128  VPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSK 187
                   GD +T   L        S  +    +  S V R+ G       G GS      
Sbjct: 967  ----GQLGDGTTTQRLLPVPISSSSGVIAAAANWHSLVVRTDGTVW----GWGSNN---- 1014

Query: 188  RRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGY 247
                  A Q  + S+S  +     P   ++  GVR  ++++G  H+LAL   G VW WG+
Sbjct: 1015 ------ASQLGDGSTSDRK----MPTPSSVPNGVR--SISSGANHSLALRSDGTVWAWGF 1062

Query: 248  GGEGQLGLG-SRIRMV 262
            G  GQLG G   +R+V
Sbjct: 1063 GNSGQLGDGVMSMRLV 1078


>gi|326673186|ref|XP_685685.5| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Danio rerio]
          Length = 1053

 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 79/250 (31%), Positives = 114/250 (45%), Gaps = 30/250 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  HTLAL+D GQV+ WG G +GQLGL      +  P  +  +           
Sbjct: 86  IVAVSCGEAHTLALNDKGQVFAWGLGSDGQLGLSIVEDCLRVPRTVKSLSEV-------- 137

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL- 341
                             ++  +ACG  HS  +   G + ++G   YGQ G G     + 
Sbjct: 138 ------------------HITQVACGYWHSLALARGGEIFSWGQNKYGQLGLGQQGACVC 179

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  + SL GI    ++AG  H+  ++  G ++ +G N+FGQLG G +     P LL   
Sbjct: 180 SPQVIQSLQGIPFGQISAGGAHSFGLTLSGAIFGWGRNKFGQLGLGDNDDRRFPVLLK-- 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           +L +     + CG  HTA +  +G VF +G   YGQLG         P +V  + G V  
Sbjct: 238 TLRSQQVVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGSVVS 297

Query: 461 NVACGWWHTL 470
            +ACG  HTL
Sbjct: 298 QIACGRQHTL 307



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 79/268 (29%), Positives = 122/268 (45%), Gaps = 34/268 (12%)

Query: 205 DENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSS 264
           DE +   P       G R+  V  G RHT+ L + G V+  G    GQLG          
Sbjct: 18  DEEVLLEPRRCEFFEGKRVRDVGCGRRHTVFLLEDGTVYTCGCNDLGQLG---------- 67

Query: 265 PHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTF 324
                     + K R       S++++          +  ++CG  H+  + D G +  +
Sbjct: 68  ----------HEKARKKPEQVVSLDAQN---------IVAVSCGEAHTLALNDKGQVFAW 108

Query: 325 GWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQ 383
           G G  GQ G    +D L  P  V SL  + I  VA G WH++ ++  G+++++G N++GQ
Sbjct: 109 GLGSDGQLGLSIVEDCLRVPRTVKSLSEVHITQVACGYWHSLALARGGEIFSWGQNKYGQ 168

Query: 384 LGTGGDQAETL-PRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGD 442
           LG G   A    P+++   SL+ +    +S G  H+  +   G +F WG NK+GQLGLGD
Sbjct: 169 LGLGQQGACVCSPQVIQ--SLQGIPFGQISAGGAHSFGLTLSGAIFGWGRNKFGQLGLGD 226

Query: 443 VIDRNIPSQV-TIEGCVPRNVACGWWHT 469
             DR  P  + T+       + CG  HT
Sbjct: 227 NDDRRFPVLLKTLRSQQVVYICCGEDHT 254



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/157 (36%), Positives = 80/157 (50%), Gaps = 8/157 (5%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P       G ++  V  G  HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEVLLEPRRCEFFEGKRVRDVGCGRRHTVFLLEDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G ++A   P  + +   +N+   +VSCG  HT  + D G+VF WG    GQL
Sbjct: 61  NDLGQL--GHEKARKKPEQVVSLDAQNI--VAVSCGEAHTLALNDKGQVFAWGLGSDGQL 116

Query: 439 GLGDVID-RNIPSQV-TIEGCVPRNVACGWWHTLLLA 473
           GL  V D   +P  V ++       VACG+WH+L LA
Sbjct: 117 GLSIVEDCLRVPRTVKSLSEVHITQVACGYWHSLALA 153



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 83/308 (26%), Positives = 128/308 (41%), Gaps = 56/308 (18%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDD--LGQSYVTSGKHGEIPEPFPLPTEASIVK 102
           +++    CG A  +A++D  ++  WG   D  LG S V       +P      +E  I +
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVFAWGLGSDGQLGLSIVEDCL--RVPRTVKSLSEVHITQ 141

Query: 103 AAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPR 162
            A G+ H +A+  GGE+++WG  +       +G L  G G             + Q  P 
Sbjct: 142 VACGYWHSLALARGGEIFSWGQNK-------YGQL--GLGQQGACVCSPQVIQSLQGIPF 192

Query: 163 SQVSRSSGGTSSGTDGRGS--GEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPG 220
            Q+S + G  S G    G+  G   +K  ++ L          GD +   FP L+     
Sbjct: 193 GQIS-AGGAHSFGLTLSGAIFGWGRNKFGQLGL----------GDNDDRRFPVLLKTLRS 241

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            ++  +  G  HT AL+  G V+ +G GG GQLG  S    V +P  +            
Sbjct: 242 QQVVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEV-NPRKV------------ 288

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHS-AVITDAGALLTFGWGLYGQCGQGSTDD 339
                         F + G+ V  IACG +H+ A I  +G + +FG G  GQ G  ST +
Sbjct: 289 --------------FELMGSVVSQIACGRQHTLAFIPSSGKIDSFGLGGNGQLGTRSTCN 334

Query: 340 ELSPNCVS 347
            +SP  V 
Sbjct: 335 RISPTPVK 342


>gi|348686412|gb|EGZ26227.1| hypothetical protein PHYSODRAFT_486876 [Phytophthora sojae]
          Length = 289

 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 93/275 (33%), Positives = 128/275 (46%), Gaps = 51/275 (18%)

Query: 113 VTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPR-SQVSRSSGG 171
           V + GEV  WG          +G+L   + + K V       +T QVS R S V+  S  
Sbjct: 44  VADSGEVVGWG-------RAFYGELPADSAVGKGV-------VTLQVSERCSAVACGSNH 89

Query: 172 TSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGR 231
             + TD        S R        +A+++ S  E++   P +V     V+I  VAAGG 
Sbjct: 90  VLALTD--------SGRVVAWGWNASAQAAVSAGEDVVRVPTVVEFPTPVQIVQVAAGGM 141

Query: 232 HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
           H+LAL   G VW WG    GQLG+ S +    SP             R  ALS       
Sbjct: 142 HSLALDSSGGVWAWGCNEFGQLGINSEVETQHSP-------------RRVALS------- 181

Query: 292 GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                     V+ IA G  HSA+++ +G + TFGWGLY Q G GST +E+ P  V +L G
Sbjct: 182 ------AEIRVRDIAAGWAHSALVSTSGEVFTFGWGLYNQLGHGSTQNEVEPVVVDALQG 235

Query: 352 IQIEG--VAAGLWHTICISSDGDVYAFGGNQFGQL 384
           +  E   VA G WHT  +++ GD+Y +G  + GQL
Sbjct: 236 VDSEAVQVACGNWHTAALTASGDLYTWGWGKDGQL 270



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 105/226 (46%), Gaps = 27/226 (11%)

Query: 214 LVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES 273
           +VTL    R + VA G  H LAL+D G+V  WG+    Q  + +   +V  P  +     
Sbjct: 71  VVTLQVSERCSAVACGSNHVLALTDSGRVVAWGWNASAQAAVSAGEDVVRVPTVVE---- 126

Query: 274 SYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCG 333
                                F  P   V+ +A GG HS  +  +G +  +G   +GQ G
Sbjct: 127 ---------------------FPTPVQIVQ-VAAGGMHSLALDSSGGVWAWGCNEFGQLG 164

Query: 334 QGS-TDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAE 392
             S  + + SP  V+    I++  +AAG  H+  +S+ G+V+ FG   + QLG G  Q E
Sbjct: 165 INSEVETQHSPRRVALSAEIRVRDIAAGWAHSALVSTSGEVFTFGWGLYNQLGHGSTQNE 224

Query: 393 TLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
             P ++DA    +  +  V+CG  HTA +   G ++ WGW K GQL
Sbjct: 225 VEPVVVDALQGVDSEAVQVACGNWHTAALTASGDLYTWGWGKDGQL 270



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 60/173 (34%), Positives = 93/173 (53%), Gaps = 7/173 (4%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVAAGLWH 363
           +ACG  H   +TD+G ++ +GW    Q    + +D +  P  V     +QI  VAAG  H
Sbjct: 83  VACGSNHVLALTDSGRVVAWGWNASAQAAVSAGEDVVRVPTVVEFPTPVQIVQVAAGGMH 142

Query: 364 TICISSDGDVYAFGGNQFGQLGTGGD-QAETLPRLLDAPSLENVHSKSVSCGARHTAVIA 422
           ++ + S G V+A+G N+FGQLG   + + +  PR + A S E +  + ++ G  H+A+++
Sbjct: 143 SLALDSSGGVWAWGCNEFGQLGINSEVETQHSPRRV-ALSAE-IRVRDIAAGWAHSALVS 200

Query: 423 DDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR--NVACGWWHTLLL 472
             G+VF +GW  Y QLG G   +   P  V  ++G       VACG WHT  L
Sbjct: 201 TSGEVFTFGWGLYNQLGHGSTQNEVEPVVVDALQGVDSEAVQVACGNWHTAAL 253



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 95/220 (43%), Gaps = 22/220 (10%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHG-EIPEPFPLPTEASIVKAAAGWAHCV 111
           G    +A++DS +++ WG      Q+ V++G+    +P     PT   IV+ AAG  H +
Sbjct: 86  GSNHVLALTDSGRVVAWGWNAS-AQAAVSAGEDVVRVPTVVEFPTPVQIVQVAAGGMHSL 144

Query: 112 AVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG 171
           A+   G V+ WG  E       FG L    G++ +V E Q S     +S   +V   + G
Sbjct: 145 ALDSSGGVWAWGCNE-------FGQL----GINSEV-ETQHSPRRVALSAEIRVRDIAAG 192

Query: 172 TSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGV--RIATVAAG 229
            +       SGE  +      L  Q    S+  +      P +V    GV      VA G
Sbjct: 193 WAHSALVSTSGEVFTFGW--GLYNQLGHGSTQNEVE----PVVVDALQGVDSEAVQVACG 246

Query: 230 GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP 269
             HT AL+  G ++ WG+G +GQL    R R +     IP
Sbjct: 247 NWHTAALTASGDLYTWGWGKDGQLVRPWRPRHLHVRALIP 286



 Score = 40.0 bits (92), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 49/117 (41%), Gaps = 11/117 (9%)

Query: 14  VFMWGYLPGALPQRSP----ILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITW 69
           V  WG+   A    S     +  P VV  P  V      V  GG   ++A+  S  +  W
Sbjct: 99  VVAWGWNASAQAAVSAGEDVVRVPTVVEFPTPVQIV--QVAAGGM-HSLALDSSGGVWAW 155

Query: 70  GSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGW 124
           G  +   LG +     +H   P    L  E  +   AAGWAH   V+  GEV+T+GW
Sbjct: 156 GCNEFGQLGINSEVETQHS--PRRVALSAEIRVRDIAAGWAHSALVSTSGEVFTFGW 210


>gi|308799553|ref|XP_003074557.1| protein kinase, putative (ISS) [Ostreococcus tauri]
 gi|116000728|emb|CAL50408.1| protein kinase, putative (ISS) [Ostreococcus tauri]
          Length = 1813

 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 91/251 (36%), Positives = 119/251 (47%), Gaps = 37/251 (14%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYG--- 276
           GV    +A+G  HTLAL+  G +W WG   EGQLGL             PC  S YG   
Sbjct: 371 GVVTVDIASGEFHTLALTSSGDIWAWGSNIEGQLGLK------------PCEISKYGNGL 418

Query: 277 -KDRSAALSRGSVNSEGPGFRVPGNYVK--GIACGGRHSAVITDA-----GALLTFGWGL 328
            + R +A      +S  P     G  VK   IA G R+S  +T A     G    F WG 
Sbjct: 419 GECRESAPEMPYTDS--PQIVAVGANVKFAAIAAGARYSMALTAADETGAGGGRVFAWG- 475

Query: 329 YGQCGQ-------GSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
           YG+ GQ        + +  L P  +++L    I  +AAG  H   I+S G++Y +G N F
Sbjct: 476 YGENGQLGLVLDGRNVERALVPQPLTTLGDEVIVFIAAGESHVAAIASTGELYTWGSNTF 535

Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL- 440
           GQLG G       P  +   S  N+   SVSCG  HT  ++D G+VF WG N+YGQLG  
Sbjct: 536 GQLGHGDRVDRGKPTKVQILSDANIKIHSVSCGRSHTVAVSDYGEVFTWGSNEYGQLGTE 595

Query: 441 ---GDVIDRNI 448
               D  +RN+
Sbjct: 596 PRPADDTERNM 606



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 105/354 (29%), Positives = 151/354 (42%), Gaps = 59/354 (16%)

Query: 75  LGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGR-- 132
           LG   VT        +P  + + A I K AAG  H VA+TE G+VYTWG  +    GR  
Sbjct: 282 LGLETVTPSASTIAAQPVRIGSLALITKLAAGAFHVVAMTESGKVYTWGADDLGQLGRGW 341

Query: 133 VFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ----VSRSSGG------TSSGT----DG 178
           + G L +   +  + F++  S     V+   +    V  +SG       TSSG       
Sbjct: 342 MPGMLQS---IKSEAFKKSKSLPARVVNNGFRGVVTVDIASGEFHTLALTSSGDIWAWGS 398

Query: 179 RGSGEEGSKRRRIS-LAKQTAESSSSGDEN-LSAFPCLVTLNPGVRIATVAAGGRHTLAL 236
              G+ G K   IS       E   S  E   +  P +V +   V+ A +AAG R+++AL
Sbjct: 399 NIEGQLGLKPCEISKYGNGLGECRESAPEMPYTDSPQIVAVGANVKFAAIAAGARYSMAL 458

Query: 237 SDI-------GQVWGWGYGGEGQLGL---GSRIRMVSSPHPIPCIESSYGKDRSAALSRG 286
           +         G+V+ WGYG  GQLGL   G  +     P P+    ++ G +        
Sbjct: 459 TAADETGAGGGRVFAWGYGENGQLGLVLDGRNVERALVPQPL----TTLGDE-------- 506

Query: 287 SVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCV 346
                          +  IA G  H A I   G L T+G   +GQ G G   D   P  V
Sbjct: 507 --------------VIVFIAAGESHVAAIASTGELYTWGSNTFGQLGHGDRVDRGKPTKV 552

Query: 347 SSL--LGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
             L    I+I  V+ G  HT+ +S  G+V+ +G N++GQLGT    A+   R +
Sbjct: 553 QILSDANIKIHSVSCGRSHTVAVSDYGEVFTWGSNEYGQLGTEPRPADDTERNM 606



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 132/282 (46%), Gaps = 43/282 (15%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  +AAG  H +A+++ G+V+ WG    GQLG G    M+ S      I+S   K +S +
Sbjct: 307 ITKLAAGAFHVVAMTESGKVYTWGADDLGQLGRGWMPGMLQS------IKSEAFK-KSKS 359

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD---- 338
           L    VN+   GFR  G     IA G  H+  +T +G +  +G  + GQ G    +    
Sbjct: 360 LPARVVNN---GFR--GVVTVDIASGEFHTLALTSSGDIWAWGSNIEGQLGLKPCEISKY 414

Query: 339 -----------DEL----SPNCVSSLLGIQIEGVAAGLWHTICISSD-------GDVYAF 376
                       E+    SP  V+    ++   +AAG  +++ +++        G V+A+
Sbjct: 415 GNGLGECRESAPEMPYTDSPQIVAVGANVKFAAIAAGARYSMALTAADETGAGGGRVFAW 474

Query: 377 GGNQFGQLGTGGDQAETLPRLLDAP--SLENVHSKSVSCGARHTAVIADDGKVFCWGWNK 434
           G  + GQLG   D       L+  P  +L +     ++ G  H A IA  G+++ WG N 
Sbjct: 475 GYGENGQLGLVLDGRNVERALVPQPLTTLGDEVIVFIAAGESHVAAIASTGELYTWGSNT 534

Query: 435 YGQLGLGDVIDRNIPSQVTI---EGCVPRNVACGWWHTLLLA 473
           +GQLG GD +DR  P++V I         +V+CG  HT+ ++
Sbjct: 535 FGQLGHGDRVDRGKPTKVQILSDANIKIHSVSCGRSHTVAVS 576



 Score = 38.9 bits (89), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 57/128 (44%), Gaps = 25/128 (19%)

Query: 14  VFMWGY---------LPGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSR 64
           VF WGY         L G   +R+ +  PL      T+G         G     AI+ + 
Sbjct: 471 VFAWGYGENGQLGLVLDGRNVERALVPQPLT-----TLGDEVIVFIAAGESHVAAIASTG 525

Query: 65  KLITWGSTDDLGQ----SYVTSGKHGEIPEPFPLPTEASIV--KAAAGWAHCVAVTEGGE 118
           +L TWGS +  GQ      V  GK    P    + ++A+I     + G +H VAV++ GE
Sbjct: 526 ELYTWGS-NTFGQLGHGDRVDRGK----PTKVQILSDANIKIHSVSCGRSHTVAVSDYGE 580

Query: 119 VYTWGWKE 126
           V+TWG  E
Sbjct: 581 VFTWGSNE 588



 Score = 38.1 bits (87), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 10/84 (11%)

Query: 65  KLITWGSTDDLGQSYVTSGKHGE---IPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYT 121
           ++  WG  ++     V  G++ E   +P+P     +  IV  AAG +H  A+   GE+YT
Sbjct: 470 RVFAWGYGENGQLGLVLDGRNVERALVPQPLTTLGDEVIVFIAAGESHVAAIASTGELYT 529

Query: 122 WGWKECVPSGRVFGDLSTGTGLDK 145
           WG          FG L  G  +D+
Sbjct: 530 WG-------SNTFGQLGHGDRVDR 546


>gi|431911480|gb|ELK13686.1| Putative E3 ubiquitin-protein ligase HERC5 [Pteropus alecto]
          Length = 923

 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 83/268 (30%), Positives = 123/268 (45%), Gaps = 33/268 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI------PCIESSYG 276
           I  +  G  H+LALS  G+++ WG    GQLG+G      ++P  +      P  + S G
Sbjct: 38  IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGKIFDSTTAPQIVEHLSGVPLAQISAG 97

Query: 277 KDRSAALS---------RGSVNSEGPGFRVPGNY-----------VKGIACGGRHSAVIT 316
           K  S ALS         R      G G     ++           V+ +ACGG H+A++T
Sbjct: 98  KSHSMALSVSGNIYSWGRNDFGQLGLGHTDDKDFPSLIEALENQKVEFLACGGSHTALLT 157

Query: 317 DAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD-GDVYA 375
             G + TFG G YGQ G  ST +EL P  V+ L G ++  VA G  HT+   SD G V++
Sbjct: 158 KDGLVFTFGAGKYGQLGHNSTQNELRPCLVTKLAGNRVTQVACGRQHTLAYVSDLGKVFS 217

Query: 376 FGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKY 435
           FG  + GQLG GG   + +P  +  PS E +  ++ +       +   +  +  W   + 
Sbjct: 218 FGSGEEGQLGNGGTHNQLIPLPMKLPSNEELKFENRTSEKELIIIAGGNQSILLWIKKEN 277

Query: 436 GQLGLGDVIDRNIPSQVTIEGCVPRNVA 463
             + L     R IP+    EG V R +A
Sbjct: 278 PYVNLR----RKIPT--LNEGTVKRWIA 299



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 65/168 (38%), Positives = 92/168 (54%), Gaps = 4/168 (2%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDELSPNCVSSLLGIQIEGVAAGLWH 363
           I CG  HS  ++  G L  +G  L+GQ G G   D   +P  V  L G+ +  ++AG  H
Sbjct: 41  ITCGDYHSLALSKGGELFAWGQNLHGQLGVGKIFDSTTAPQIVEHLSGVPLAQISAGKSH 100

Query: 364 TICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
           ++ +S  G++Y++G N FGQLG G    +  P L++A  LEN   + ++CG  HTA++  
Sbjct: 101 SMALSVSGNIYSWGRNDFGQLGLGHTDDKDFPSLIEA--LENQKVEFLACGGSHTALLTK 158

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
           DG VF +G  KYGQLG     +   P  VT + G     VACG  HTL
Sbjct: 159 DGLVFTFGAGKYGQLGHNSTQNELRPCLVTKLAGNRVTQVACGRQHTL 206



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 67/122 (54%), Gaps = 4/122 (3%)

Query: 354 IEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGG-DQAETLPRLLDAPSLENVHSKSVS 412
           I  +  G +H++ +S  G+++A+G N  GQLG G    + T P++++   L  V    +S
Sbjct: 38  IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGKIFDSTTAPQIVE--HLSGVPLAQIS 95

Query: 413 CGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLL 471
            G  H+  ++  G ++ WG N +GQLGLG   D++ PS +  +E      +ACG  HT L
Sbjct: 96  AGKSHSMALSVSGNIYSWGRNDFGQLGLGHTDDKDFPSLIEALENQKVEFLACGGSHTAL 155

Query: 472 LA 473
           L 
Sbjct: 156 LT 157



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 103/250 (41%), Gaps = 50/250 (20%)

Query: 97  EASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLT 156
           E +I++   G  H +A+++GGE++ WG         + G L  G   D     +    + 
Sbjct: 35  EKNIIQITCGDYHSLALSKGGELFAWG-------QNLHGQLGVGKIFDSTTAPQ----IV 83

Query: 157 EQVS--PRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCL 214
           E +S  P +Q+S    G S       SG         S  +        G  +   FP L
Sbjct: 84  EHLSGVPLAQIS---AGKSHSMALSVSG------NIYSWGRNDFGQLGLGHTDDKDFPSL 134

Query: 215 VTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESS 274
           +      ++  +A GG HT  L+  G V+ +G G  GQLG  S    +      PC+ + 
Sbjct: 135 IEALENQKVEFLACGGSHTALLTKDGLVFTFGAGKYGQLGHNSTQNELR-----PCLVT- 188

Query: 275 YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHS-AVITDAGALLTFGWGLYGQCG 333
                                ++ GN V  +ACG +H+ A ++D G + +FG G  GQ G
Sbjct: 189 ---------------------KLAGNRVTQVACGRQHTLAYVSDLGKVFSFGSGEEGQLG 227

Query: 334 QGSTDDELSP 343
            G T ++L P
Sbjct: 228 NGGTHNQLIP 237


>gi|126330876|ref|XP_001375975.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Monodelphis
           domestica]
          Length = 1016

 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 117/251 (46%), Gaps = 30/251 (11%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I +V+ G  H+LA+   G+V+ WG G +GQLG+    ++ S P  I              
Sbjct: 91  IVSVSCGKEHSLAICKEGRVFSWGSGSDGQLGIREFKKLSSIPKKI-------------- 136

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDEL 341
                   E   F++       ++CG  HS  +   G + ++G   +GQ G G +   + 
Sbjct: 137 -------DELSSFKIIQ-----VSCGHYHSIALAQDGRVFSWGKNNHGQLGLGENVPSQA 184

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ--AETLPRLLD 399
           SP  V SL GI +  VAAG  H+  +S  G  Y +G N  GQL   G +  AE + +   
Sbjct: 185 SPQWVKSLDGIPLAQVAAGGAHSFALSFSGTSYGWGRNNAGQLALSGKKESAEQISKPFS 244

Query: 400 APSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVP 459
              L+ +    +SCG  HTAV+  DGKVF +G N  GQLG   +     P QV       
Sbjct: 245 IGELKRLQVTYISCGDEHTAVLTQDGKVFTFGSNDSGQLGRQLISGMKGP-QVVDSAVSF 303

Query: 460 RNVACGWWHTL 470
             +ACG +HTL
Sbjct: 304 SQIACGSYHTL 314



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 88/176 (50%), Gaps = 13/176 (7%)

Query: 306 ACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTI 365
           ACG RHS ++   G + + G    GQ G+        P  + +L    I  V+ G  H++
Sbjct: 43  ACGERHSLLLLSDGTVWSCGNNSCGQLGRKRCQKHGRPAQIQALETQDIVSVSCGKEHSL 102

Query: 366 CISSDGDVYAFGGNQFGQLGTGG-DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
            I  +G V+++G    GQLG     +  ++P+ +D   L +     VSCG  H+  +A D
Sbjct: 103 AICKEGRVFSWGSGSDGQLGIREFKKLSSIPKKID--ELSSFKIIQVSCGHYHSIALAQD 160

Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQV------TIEGCVPRNVACGWWHTLLLAV 474
           G+VF WG N +GQLGLG+    N+PSQ       +++G     VA G  H+  L+ 
Sbjct: 161 GRVFSWGKNNHGQLGLGE----NVPSQASPQWVKSLDGIPLAQVAAGGAHSFALSF 212



 Score = 44.7 bits (104), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 52/216 (24%), Positives = 92/216 (42%), Gaps = 28/216 (12%)

Query: 47  RDVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +D+    CG   ++AI    ++ +WGS  D         K   IP+     +   I++ +
Sbjct: 89  QDIVSVSCGKEHSLAICKEGRVFSWGSGSDGQLGIREFKKLSSIPKKIDELSSFKIIQVS 148

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS--PR 162
            G  H +A+ + G V++WG           G L    GL ++V  + S    + +   P 
Sbjct: 149 CGHYHSIALAQDGRVFSWGKNN-------HGQL----GLGENVPSQASPQWVKSLDGIPL 197

Query: 163 SQV----SRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLN 218
           +QV    + S   + SGT   G G   + +  +S  K++AE  S         P  +   
Sbjct: 198 AQVAAGGAHSFALSFSGT-SYGWGRNNAGQLALSGKKESAEQISK--------PFSIGEL 248

Query: 219 PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG 254
             +++  ++ G  HT  L+  G+V+ +G    GQLG
Sbjct: 249 KRLQVTYISCGDEHTAVLTQDGKVFTFGSNDSGQLG 284


>gi|348685253|gb|EGZ25068.1| hypothetical protein PHYSODRAFT_326137 [Phytophthora sojae]
          Length = 5016

 Score =  111 bits (277), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 84/282 (29%), Positives = 128/282 (45%), Gaps = 23/282 (8%)

Query: 200 SSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
           +SS   + +  FP      P + IA V+ G  H   ++   +++ WG    GQLGLG   
Sbjct: 212 TSSPTPQMVVTFPLHFQREP-LSIAHVSCGKHHVAVITGQARLFTWGSNKYGQLGLGD-F 269

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAG 319
              + P  +    ++    R A     +V          GN V  +ACG  H+  +T   
Sbjct: 270 SSRTQPEEVHFALATLSSHRRALRVMHTVQHG-------GNNVTHVACGAAHTLFVTHQQ 322

Query: 320 ALLTFGWGLYGQCGQGSTDDEL------SPNCVSSLLGIQIEGVAAGLWHTICISSDGDV 373
            +L  G+   GQ G G    +       +P  V SL    I  + AG  H+ C+ S+GDV
Sbjct: 323 QILGMGYNQAGQLGLGHRLQQYKGWRSCTPITVESLRDQSILDLGAGQNHSACVLSNGDV 382

Query: 374 YAFGGNQFGQLGTGG-DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGW 432
           Y +G    G+LG G   +   +P L+      ++ +++V CGARH AVI+D   ++ WG 
Sbjct: 383 YTWGCGDDGRLGDGKLGEGVAVPTLIPLLREASIRARTVRCGARHMAVISDSDLLYIWGA 442

Query: 433 NKYGQLGLGDVIDRNIPSQVTI-----EGCVPRNVACGWWHT 469
           N +GQLG  D   R+ P  +       EG    +VA G +HT
Sbjct: 443 NDFGQLGCKDRKPRSQPFLLATPPLFAEGV--EDVALGEFHT 482



 Score =  101 bits (251), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 108/429 (25%), Positives = 161/429 (37%), Gaps = 87/429 (20%)

Query: 53  GCGFAMA-ISDSR--KLITWG--STDDLGQSYVTSGKHGEIPEPFPLPTEA---SIVKAA 104
           GC F++A ++  R   L+ WG  S  +LG   +TS    ++   FPL  +    SI   +
Sbjct: 179 GCHFSVAAVAQPRGTTLLAWGLNSNGELGNGTMTSSPTPQMVVTFPLHFQREPLSIAHVS 238

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G  H   +T    ++TWG  +       +G L  G                   S R+Q
Sbjct: 239 CGKHHVAVITGQARLFTWGSNK-------YGQLGLG-----------------DFSSRTQ 274

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
                   ++ +         S RR    A +   +   G  N               + 
Sbjct: 275 PEEVHFALATLS---------SHRR----ALRVMHTVQHGGNN---------------VT 306

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            VA G  HTL ++   Q+ G GY   GQLGLG R++          I     +D+S    
Sbjct: 307 HVACGAAHTLFVTHQQQILGMGYNQAGQLGLGHRLQQYKGWRSCTPITVESLRDQS---- 362

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN 344
                            +  +  G  HSA +   G + T+G G  G+ G G   + ++  
Sbjct: 363 -----------------ILDLGAGQNHSACVLSNGDVYTWGCGDDGRLGDGKLGEGVAVP 405

Query: 345 CVSSLL---GIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
            +  LL    I+   V  G  H   IS    +Y +G N FGQLG    +  + P LL  P
Sbjct: 406 TLIPLLREASIRARTVRCGARHMAVISDSDLLYIWGANDFGQLGCKDRKPRSQPFLLATP 465

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPR 460
            L     + V+ G  HT  +   GK + WG N      L  V   + P  + + E    R
Sbjct: 466 PLFAEGVEDVALGEFHTTCVTSAGKAYTWGLNLRDNSAL--VASHHTPQAIDLPEKERVR 523

Query: 461 NVACGWWHT 469
            V+CGW HT
Sbjct: 524 KVSCGWTHT 532



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 86/332 (25%), Positives = 130/332 (39%), Gaps = 58/332 (17%)

Query: 170 GGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVA-A 228
           GG ++       G   S+R  IS+A      S + +++ S   C+  L  G   +  A A
Sbjct: 131 GGLTTKRKAAAMGSTHSRRLDISVALPEETGSDAAEQDASW--CVSHLASGCHFSVAAVA 188

Query: 229 GGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSV 288
             R T  L+       WG    G+LG G+   M SSP P   +       R   LS    
Sbjct: 189 QPRGTTLLA-------WGLNSNGELGNGT---MTSSPTPQMVVTFPLHFQREP-LS---- 233

Query: 289 NSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS 348
                        +  ++CG  H AVIT    L T+G   YGQ G G       P  V  
Sbjct: 234 -------------IAHVSCGKHHVAVITGQARLFTWGSNKYGQLGLGDFSSRTQPEEVHF 280

Query: 349 LL-------------------GIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD 389
            L                   G  +  VA G  HT+ ++    +   G NQ GQLG G  
Sbjct: 281 ALATLSSHRRALRVMHTVQHGGNNVTHVACGAAHTLFVTHQQQILGMGYNQAGQLGLGHR 340

Query: 390 -QAETLPRLLDAPSLENVHSKSV---SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVID 445
            Q     R     ++E++  +S+     G  H+A +  +G V+ WG    G+LG G + +
Sbjct: 341 LQQYKGWRSCTPITVESLRDQSILDLGAGQNHSACVLSNGDVYTWGCGDDGRLGDGKLGE 400

Query: 446 R-NIPSQVTI--EGCV-PRNVACGWWHTLLLA 473
              +P+ + +  E  +  R V CG  H  +++
Sbjct: 401 GVAVPTLIPLLREASIRARTVRCGARHMAVIS 432


>gi|403364753|gb|EJY82151.1| RCC1 domain containing protein [Oxytricha trifallax]
          Length = 1344

 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 75/220 (34%), Positives = 109/220 (49%), Gaps = 28/220 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  VA G  H LA+++  +++ WG G  G LG G+R  +    H I  IE    KD +  
Sbjct: 291 ITQVACGSAHILAITEDSELFSWGSGQYGALGFGTRDDIFEPRHLI--IEK---KDYTY- 344

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                             +++GIACG  HS  +T    +LT+G G  G+ G G  DD L 
Sbjct: 345 ------------------FIEGIACGKYHSMCLTRKKKILTWGQGQGGRLGHGDEDDVLV 386

Query: 343 PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL-DAP 401
           P  +  L   +   ++AG  H+  IS   ++Y +G   +G+LG G D +E  P+L+ D  
Sbjct: 387 PKEIYDLSKKKPIFISAGESHSAAISEKLNLYTWGTGTYGRLGHGMDTSEKKPKLIEDLD 446

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
             E +H   VSCGA HT  I   G V+ +G  KYG+LG+ 
Sbjct: 447 QYEIIH---VSCGAFHTLAITGQGTVYAFGQGKYGKLGIN 483



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 99/425 (23%), Positives = 170/425 (40%), Gaps = 84/425 (19%)

Query: 89  PEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGW------------KECVPS--GRVF 134
           P+   +  +   + AAAG+ H + + + G++Y+WG+            +E +P   G++ 
Sbjct: 506 PQEMLVQDKNEAILAAAGYNHSLCLAKSGKIYSWGYNGKGLLGRQKGFEEHLPIEIGQIP 565

Query: 135 GDL-----STGTGLDKDVFERQSSFLTEQVSPR----SQVSRSSGGTSSGTDGRGSGEEG 185
           G+L     +    + +   +++ +F  E +       + VS ++GG          G+  
Sbjct: 566 GELIGKIPNIDELIQRGDLKQEETFSYEVIQVACGVLNTVSLTNGGEVYVFGSNAYGQLA 625

Query: 186 SKRRRISLAKQTAES-----------SSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTL 234
             + + +  K   +             SS   +L  FP   T    VRI  +A GG H  
Sbjct: 626 KDKDQTTFRKYKKQDQNNNNDNSQALDSSEQMSLIKFPGETT----VRINYIACGGEHIF 681

Query: 235 ALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPG 294
           A+S + +++GWG   EGQLGLG      + P  I                          
Sbjct: 682 AISRMNELFGWGRNDEGQLGLGFVSDFTAEPTLIR------------------------- 716

Query: 295 FRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ- 353
            ++    ++ IACG  +SA ++  G L   G    G+ G G     L    + S   IQ 
Sbjct: 717 -QIAHKNIQMIACGDNYSAAVSAFGELFVTGNLENGKLGLGQA---LKKGFLLSFTLIQN 772

Query: 354 ---IEGVAAGLWHTICIS--------SDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPS 402
              I+ VA G  H + I+         DG  Y++G N  GQLG G  +   +P+ +    
Sbjct: 773 LAPIKSVACGPNHMLAIADYNPDHPIKDGMCYSWGRNWKGQLGIGSKEDSNVPKKIHNAK 832

Query: 403 LENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRN 461
                 K V+CG   +  +    +V+ WG NKY         D +IP  +  +E    ++
Sbjct: 833 ---ERFKKVACGQDFSIGLTYGNQVYLWGNNKYF-CDSKITKDVDIPQLLQALEQAQIKD 888

Query: 462 VACGW 466
           +AC +
Sbjct: 889 IACSY 893



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 121/459 (26%), Positives = 180/459 (39%), Gaps = 65/459 (14%)

Query: 52  GGCGFAMAISDSRKLITWGS--TDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAH 109
            G   + AIS+   L TWG+     LG    TS K  ++ E      +  I+  + G  H
Sbjct: 403 AGESHSAAISEKLNLYTWGTGTYGRLGHGMDTSEKKPKLIEDLD---QYEIIHVSCGAFH 459

Query: 110 CVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFER--QSSFLTEQVSPRSQVSR 167
            +A+T  G VY +G       G+ +G L       + VF R  + SF    V P+  + +
Sbjct: 460 TLAITGQGTVYAFG------QGK-YGKLGINRKQREGVFSRPEKISFYKVGVEPQEMLVQ 512

Query: 168 SS-------------------------GGTSSGTDGRGSGEEGSKRRRI-SLAKQTAESS 201
                                      G    G  GR  G E      I  +  +     
Sbjct: 513 DKNEAILAAAGYNHSLCLAKSGKIYSWGYNGKGLLGRQKGFEEHLPIEIGQIPGELIGKI 572

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLG---SR 258
            + DE +              +  VA G  +T++L++ G+V+ +G    GQL      + 
Sbjct: 573 PNIDELIQRGDLKQEETFSYEVIQVACGVLNTVSLTNGGEVYVFGSNAYGQLAKDKDQTT 632

Query: 259 IRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDA 318
            R           ++S   D S  +S      E     V  NY   IACGG H   I+  
Sbjct: 633 FRKYKKQDQNNNNDNSQALDSSEQMSLIKFPGETT---VRINY---IACGGEHIFAISRM 686

Query: 319 GALLTFGWGLY--GQCGQGSTDD-ELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYA 375
             L  FGWG    GQ G G   D    P  +  +    I+ +A G  ++  +S+ G+++ 
Sbjct: 687 NEL--FGWGRNDEGQLGLGFVSDFTAEPTLIRQIAHKNIQMIACGDNYSAAVSAFGELFV 744

Query: 376 FGGNQFGQLGTGGDQAETLPRLLDAPSLENVHS-KSVSCGARHTAVIAD--------DGK 426
            G  + G+LG G  QA     LL    ++N+   KSV+CG  H   IAD        DG 
Sbjct: 745 TGNLENGKLGLG--QALKKGFLLSFTLIQNLAPIKSVACGPNHMLAIADYNPDHPIKDGM 802

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACG 465
            + WG N  GQLG+G   D N+P ++       + VACG
Sbjct: 803 CYSWGRNWKGQLGIGSKEDSNVPKKIHNAKERFKKVACG 841



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 114/494 (23%), Positives = 185/494 (37%), Gaps = 116/494 (23%)

Query: 33  PLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQS-YVTSGKHGEIPEP 91
           P  ++ P       +  CG      +AI++  +L +WGS    GQ   +  G   +I EP
Sbjct: 279 PTAIKFPKHTKPITQVACGSA--HILAITEDSELFSWGS----GQYGALGFGTRDDIFEP 332

Query: 92  FPLPTEAS-----IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKD 146
             L  E       I   A G  H + +T   ++ TWG  +    GR+      G G + D
Sbjct: 333 RHLIIEKKDYTYFIEGIACGKYHSMCLTRKKKILTWGQGQ---GGRL------GHGDEDD 383

Query: 147 VFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGR-------GSGEEGSKRRRISLAKQTAE 199
           V   +  +    +S +  +  S+G + S            G+G  G    R+     T+E
Sbjct: 384 VLVPKEIY---DLSKKKPIFISAGESHSAAISEKLNLYTWGTGTYG----RLGHGMDTSE 436

Query: 200 SSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
                 E+L  +           I  V+ G  HTLA++  G V+ +G G  G+LG+  + 
Sbjct: 437 KKPKLIEDLDQY----------EIIHVSCGAFHTLAITGQGTVYAFGQGKYGKLGINRKQ 486

Query: 260 R--MVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITD 317
           R  + S P  I   +   G +    L +              N     A G  HS  +  
Sbjct: 487 REGVFSRPEKISFYK--VGVEPQEMLVQDK------------NEAILAAAGYNHSLCLAK 532

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSL-------------------------LGI 352
           +G + ++G+   G  G+    +E  P  +  +                            
Sbjct: 533 SGKIYSWGYNGKGLLGRQKGFEEHLPIEIGQIPGELIGKIPNIDELIQRGDLKQEETFSY 592

Query: 353 QIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ---------------------- 390
           ++  VA G+ +T+ +++ G+VY FG N +GQL    DQ                      
Sbjct: 593 EVIQVACGVLNTVSLTNGGEVYVFGSNAYGQLAKDKDQTTFRKYKKQDQNNNNDNSQALD 652

Query: 391 -AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIP 449
            +E +  L+  P    V    ++CG  H   I+   ++F WG N  GQLGLG V D    
Sbjct: 653 SSEQMS-LIKFPGETTVRINYIACGGEHIFAISRMNELFGWGRNDEGQLGLGFVSD---- 707

Query: 450 SQVTIEGCVPRNVA 463
              T E  + R +A
Sbjct: 708 --FTAEPTLIRQIA 719



 Score = 46.6 bits (109), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 7/74 (9%)

Query: 407 HSK---SVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEG----CVP 459
           H+K    V+CG+ H   I +D ++F WG  +YG LG G   D   P  + IE        
Sbjct: 287 HTKPITQVACGSAHILAITEDSELFSWGSGQYGALGFGTRDDIFEPRHLIIEKKDYTYFI 346

Query: 460 RNVACGWWHTLLLA 473
             +ACG +H++ L 
Sbjct: 347 EGIACGKYHSMCLT 360


>gi|444915451|ref|ZP_21235583.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444713382|gb|ELW54282.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 746

 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 123/456 (26%), Positives = 188/456 (41%), Gaps = 83/456 (18%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHG-----EIPEPFPLPTEASIVKAAAGW 107
           G   ++A+     +  WG        Y  SG+ G     +   P  +P    + + +AG 
Sbjct: 253 GANHSLAVLADGTVRAWG--------YNASGRLGDGTTTQRATPVAVPGLTGVTEISAGG 304

Query: 108 AHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSR 167
            H +A+   G    WG         V G L  GT     V  R S  L   ++  + +S 
Sbjct: 305 GHSLALLADGTARAWG-------SNVSGQLGDGT-----VSNRTSPVLVSSLTGVTALS- 351

Query: 168 SSGGTSSGTDGRGSGEEGSKRRRISLAKQTAE------SSSSGDENLSAFPCLVTLNPGV 221
                            G       LA  TA       S   GD   +     V L PG+
Sbjct: 352 ----------------AGGNHSLALLADGTARAWGANVSGQLGDGTTTQRTLPVGL-PGL 394

Query: 222 R-IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIE-------- 272
             +A +AAGG H+LA+   G V  WG+   GQLG GS  +  ++P  +P +         
Sbjct: 395 TGVAALAAGGYHSLAVLANGTVRAWGHNTYGQLGDGSTAQR-TAPVVVPALTGVVSLTAG 453

Query: 273 -------------SSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGR--HSAVITD 317
                         ++G + S  L  G+ N  G   +V G        GG+  H+  +  
Sbjct: 454 YDHSLALLSDGTVRAWGNNASGQLGDGTTNQRGTPVQVSGLTNVVALSGGKLYHALALLS 513

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
            G +  +G+ + GQ G GST +  +P  VS L    +  +AAG  +++ + S+G V ++G
Sbjct: 514 DGTVRAWGYNMNGQLGDGSTSNRWTPVAVSGL--TNVVAIAAGGDYSLALQSNGTVQSWG 571

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQ 437
              +G LG   D     P+ +  P + NV   +++ GA H   +  DG V+ WG N +GQ
Sbjct: 572 YGVYGPLGRDYDTYSPTPKAV--PGVTNV--VAIAAGANHVLALRADGTVYAWGRNDFGQ 627

Query: 438 LGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
           LG G  + RN P QV  +   V   +A GW H+L L
Sbjct: 628 LGDGTTVQRNTPVQVPGLTNVVA--IATGWDHSLAL 661



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 120/254 (47%), Gaps = 31/254 (12%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIE-----SSYG 276
           R   +A+G  H+L  +  G V  WG    GQLG G+  +  SSP  +P +      S+ G
Sbjct: 46  RAVRLASGKAHSLLATPDGTVRAWGDNASGQLGDGTTTQR-SSPTAVPGLAGAVAVSAGG 104

Query: 277 KDRSAALSRGSVNSEG-----------------PGFRVPG-NYVKGIACGGRHSAVITDA 318
           +   A L  G+V + G                 PG  VPG + V  IA G  H+  +   
Sbjct: 105 EYSLALLGDGTVRAWGNNTYGQLGDGTTPHRASPGA-VPGLSGVVAIAAGNNHALALLSD 163

Query: 319 GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           G +  +G+  YGQ G G+T    +P  V  L G  +  +AAG  H++ + +DG V A+G 
Sbjct: 164 GTVRAWGYNAYGQLGDGTTTQRRTPVAVLGLTG--VVAIAAGENHSLAVLADGTVRAWGN 221

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N +G+LG G     T P L+   SL  V   +++ GA H+  +  DG V  WG+N  G+L
Sbjct: 222 NTYGRLGDGTTTQRTSPVLVS--SLTGV--TAIAAGANHSLAVLADGTVRAWGYNASGRL 277

Query: 439 GLGDVIDRNIPSQV 452
           G G    R  P  V
Sbjct: 278 GDGTTTQRATPVAV 291



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 75/236 (31%), Positives = 103/236 (43%), Gaps = 36/236 (15%)

Query: 219 PGVR-IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
           PG+  +  +AAG  H LAL   G V  WGY   GQLG G+  +  +   P+  +  +   
Sbjct: 142 PGLSGVVAIAAGNNHALALLSDGTVRAWGYNAYGQLGDGTTTQRRT---PVAVLGLTG-- 196

Query: 278 DRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST 337
                                   V  IA G  HS  +   G +  +G   YG+ G G+T
Sbjct: 197 ------------------------VVAIAAGENHSLAVLADGTVRAWGNNTYGRLGDGTT 232

Query: 338 DDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
               SP  VSSL G  +  +AAG  H++ + +DG V A+G N  G+LG G       P  
Sbjct: 233 TQRTSPVLVSSLTG--VTAIAAGANHSLAVLADGTVRAWGYNASGRLGDGTTTQRATP-- 288

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT 453
           +  P L  V    +S G  H+  +  DG    WG N  GQLG G V +R  P  V+
Sbjct: 289 VAVPGLTGV--TEISAGGGHSLALLADGTARAWGSNVSGQLGDGTVSNRTSPVLVS 342



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 106/384 (27%), Positives = 150/384 (39%), Gaps = 67/384 (17%)

Query: 100 IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQV 159
           +V  AAG  H +AV   G V  WG          +G L  GT       +R S  L   +
Sbjct: 197 VVAIAAGENHSLAVLADGTVRAWG-------NNTYGRLGDGT-----TTQRTSPVLVSSL 244

Query: 160 SPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAES--------SSSGDENLSAF 211
           +  + ++                  G+      LA  T  +           G     A 
Sbjct: 245 TGVTAIA-----------------AGANHSLAVLADGTVRAWGYNASGRLGDGTTTQRAT 287

Query: 212 PCLVTLNPGVR-IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR-----MVSSP 265
           P  V   PG+  +  ++AGG H+LAL   G    WG    GQLG G+        +VSS 
Sbjct: 288 PVAV---PGLTGVTEISAGGGHSLALLADGTARAWGSNVSGQLGDGTVSNRTSPVLVSSL 344

Query: 266 HPIPCIES---------------SYGKDRSAALSRGSVNSEGPGFRVPG-NYVKGIACGG 309
             +  + +               ++G + S  L  G+         +PG   V  +A GG
Sbjct: 345 TGVTALSAGGNHSLALLADGTARAWGANVSGQLGDGTTTQRTLPVGLPGLTGVAALAAGG 404

Query: 310 RHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISS 369
            HS  +   G +  +G   YGQ G GST    +P  V +L G  +  + AG  H++ + S
Sbjct: 405 YHSLAVLANGTVRAWGHNTYGQLGDGSTAQRTAPVVVPALTG--VVSLTAGYDHSLALLS 462

Query: 370 DGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFC 429
           DG V A+G N  GQLG G       P  +    L NV + S      H   +  DG V  
Sbjct: 463 DGTVRAWGNNASGQLGDGTTNQRGTP--VQVSGLTNVVALS-GGKLYHALALLSDGTVRA 519

Query: 430 WGWNKYGQLGLGDVIDRNIPSQVT 453
           WG+N  GQLG G   +R  P  V+
Sbjct: 520 WGYNMNGQLGDGSTSNRWTPVAVS 543



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 110/386 (28%), Positives = 146/386 (37%), Gaps = 52/386 (13%)

Query: 91  PFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFER 150
           P  LP    +   AAG  H +AV   G V  WG           GD ST       V   
Sbjct: 388 PVGLPGLTGVAALAAGGYHSLAVLANGTVRAWGHNTY----GQLGDGSTAQRTAPVVVPA 443

Query: 151 QSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSA 210
            +  ++        ++  S GT        SG+ G                  G  N   
Sbjct: 444 LTGVVSLTAGYDHSLALLSDGTVRAWGNNASGQLGD-----------------GTTNQRG 486

Query: 211 FPCLVTLNPGVRIATVAAGGR--HTLALSDIGQVWGWGYGGEGQLGLGS---RIRMVSSP 265
            P  V+   G+      +GG+  H LAL   G V  WGY   GQLG GS   R   V+  
Sbjct: 487 TPVQVS---GLTNVVALSGGKLYHALALLSDGTVRAWGYNMNGQLGDGSTSNRWTPVAVS 543

Query: 266 HPIPCIESSYGKDRSAAL-SRGSVNSEGPGFR----------------VPG-NYVKGIAC 307
                +  + G D S AL S G+V S G G                  VPG   V  IA 
Sbjct: 544 GLTNVVAIAAGGDYSLALQSNGTVQSWGYGVYGPLGRDYDTYSPTPKAVPGVTNVVAIAA 603

Query: 308 GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI 367
           G  H   +   G +  +G   +GQ G G+T    +P  V  L    +  +A G  H++ +
Sbjct: 604 GANHVLALRADGTVYAWGRNDFGQLGDGTTVQRNTPVQVPGL--TNVVAIATGWDHSLAL 661

Query: 368 SSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKV 427
            +DG VYA+G N   QLG G   A         P L NV   +V+ G   +  +   G V
Sbjct: 662 RADGTVYAWGYNYARQLGDG-STANYRQTPAPVPGLTNV--VAVTAGGNQSLALLSSGAV 718

Query: 428 FCWGWNKYGQLGLGDVIDRNIPSQVT 453
             WG N +G+LG G  +    P  VT
Sbjct: 719 HAWGDNSHGELGNGSTLTPPAPVAVT 744



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 58/167 (34%), Positives = 79/167 (47%), Gaps = 9/167 (5%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           +A G  HS + T  G +  +G    GQ G G+T    SP  V  L G     V+AG  ++
Sbjct: 50  LASGKAHSLLATPDGTVRAWGDNASGQLGDGTTTQRSSPTAVPGLAGA--VAVSAGGEYS 107

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           + +  DG V A+G N +GQLG G       P  +  P L  V   +++ G  H   +  D
Sbjct: 108 LALLGDGTVRAWGNNTYGQLGDGTTPHRASPGAV--PGLSGV--VAIAAGNNHALALLSD 163

Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
           G V  WG+N YGQLG G    R  P  V  + G V   +A G  H+L
Sbjct: 164 GTVRAWGYNAYGQLGDGTTTQRRTPVAVLGLTGVVA--IAAGENHSL 208



 Score = 47.0 bits (110), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 92/221 (41%), Gaps = 34/221 (15%)

Query: 53  GCGFAMAISDSRKLITWGS--TDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
           G  +++A+  +  + +WG      LG+ Y T       P P  +P   ++V  AAG  H 
Sbjct: 554 GGDYSLALQSNGTVQSWGYGVYGPLGRDYDT-----YSPTPKAVPGVTNVVAIAAGANHV 608

Query: 111 VAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSG 170
           +A+   G VY WG  +       FG L  GT + ++    Q   LT  V+  +    S  
Sbjct: 609 LALRADGTVYAWGRND-------FGQLGDGTTVQRNT-PVQVPGLTNVVAIATGWDHSLA 660

Query: 171 GTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGV-RIATVAAG 229
             + GT               + A+Q  + S++   N    P  V   PG+  +  V AG
Sbjct: 661 LRADGT---------VYAWGYNYARQLGDGSTA---NYRQTPAPV---PGLTNVVAVTAG 705

Query: 230 GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPC 270
           G  +LAL   G V  WG    G+LG GS +   + P P+  
Sbjct: 706 GNQSLALLSSGAVHAWGDNSHGELGNGSTL---TPPAPVAV 743



 Score = 46.6 bits (109), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 71/155 (45%), Gaps = 25/155 (16%)

Query: 219 PGV-RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP----CIES 273
           PGV  +  +AAG  H LAL   G V+ WG    GQLG G+ ++  ++P  +P     +  
Sbjct: 593 PGVTNVVAIAAGANHVLALRADGTVYAWGRNDFGQLGDGTTVQR-NTPVQVPGLTNVVAI 651

Query: 274 SYGKDRSAAL-SRGSVNSEGPGFR-----------------VPG-NYVKGIACGGRHSAV 314
           + G D S AL + G+V + G  +                  VPG   V  +  GG  S  
Sbjct: 652 ATGWDHSLALRADGTVYAWGYNYARQLGDGSTANYRQTPAPVPGLTNVVAVTAGGNQSLA 711

Query: 315 ITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSL 349
           +  +GA+  +G   +G+ G GST    +P  V+ L
Sbjct: 712 LLSSGAVHAWGDNSHGELGNGSTLTPPAPVAVTGL 746


>gi|162450118|ref|YP_001612485.1| BNR repeat-containing protein [Sorangium cellulosum So ce56]
 gi|161160700|emb|CAN92005.1| BNR repeat domain protein [Sorangium cellulosum So ce56]
          Length = 1462

 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 106/343 (30%), Positives = 144/343 (41%), Gaps = 57/343 (16%)

Query: 100  IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFE-RQSSFLTEQ 158
            IV  AAG  H +A+   G V  WG             LS G     + F+ R+++     
Sbjct: 810  IVAIAAGKRHSLALRGDGRVLAWGDDSAA-------QLSNGAARTPNGFKPRKNTVFEWP 862

Query: 159  VSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLN 218
             +P    +R S GT   T  R SG+         L+ Q    S+S     +  P LV + 
Sbjct: 863  TAPPWPPARRSTGTLPCTPARKSGDL--------LSLQPVRCSNS-----TLSPALVPML 909

Query: 219  PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
               RI  +  G  H+LAL   G VW WG  G GQLG+G+  +    P  IP +       
Sbjct: 910  D--RITAIVTGEEHSLALRQDGTVWAWGNNGNGQLGVGT-AKASQVPVKIPTL------- 959

Query: 279  RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
                                 N V  IA G  HS  +   G +  +G   +GQ G G+T 
Sbjct: 960  ---------------------NGVTAIAAGANHSLAVRGDGTVWAWGNNAHGQLGDGTTS 998

Query: 339  DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
                P  VS L   Q+  VA G  H++ + +DG V+AFG N  GQLG       T  R +
Sbjct: 999  QRSEPVQVSELG--QVLRVAGGTGHSLALKADGTVWAFGSNSHGQLGV---STSTSQRSI 1053

Query: 399  DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
             AP     H+ +V+CG   +AV+   G +  WG N  GQLG G
Sbjct: 1054 AAPVSGISHASAVACGGNSSAVLLPTGDIRTWGENSKGQLGDG 1096



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 114/250 (45%), Gaps = 34/250 (13%)

Query: 223  IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
            I  +AAG RH+LAL   G+V  WG     QL  G+      +P+     +++  +  +A 
Sbjct: 810  IVAIAAGKRHSLALRGDGRVLAWGDDSAAQLSNGA----ARTPNGFKPRKNTVFEWPTAP 865

Query: 283  LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                +  S G     P                   +G LL+       +C    ++  LS
Sbjct: 866  PWPPARRSTGTLPCTPAR----------------KSGDLLSL---QPVRC----SNSTLS 902

Query: 343  PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPS 402
            P  V  L   +I  +  G  H++ +  DG V+A+G N  GQLG G  +A  +P  +  P+
Sbjct: 903  PALVPML--DRITAIVTGEEHSLALRQDGTVWAWGNNGNGQLGVGTAKASQVP--VKIPT 958

Query: 403  LENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNV 462
            L  V   +++ GA H+  +  DG V+ WG N +GQLG G    R+ P QV+  G V R V
Sbjct: 959  LNGV--TAIAAGANHSLAVRGDGTVWAWGNNAHGQLGDGTTSQRSEPVQVSELGQVLR-V 1015

Query: 463  ACGWWHTLLL 472
            A G  H+L L
Sbjct: 1016 AGGTGHSLAL 1025



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 109/250 (43%), Gaps = 31/250 (12%)

Query: 223  IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS---RIRMVSSPHPIPCIESSYGKDR 279
            +  +AAG  H+LA+   G VW WG    GQLG G+   R   V        +  + G   
Sbjct: 962  VTAIAAGANHSLAVRGDGTVWAWGNNAHGQLGDGTTSQRSEPVQVSELGQVLRVAGGTGH 1021

Query: 280  SAAL-SRGSV-----NSEGP------------GFRVPG-NYVKGIACGGRHSAVITDAGA 320
            S AL + G+V     NS G                V G ++   +ACGG  SAV+   G 
Sbjct: 1022 SLALKADGTVWAFGSNSHGQLGVSTSTSQRSIAAPVSGISHASAVACGGNSSAVLLPTGD 1081

Query: 321  LLTFGWGLYGQCGQGST-DDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN 379
            + T+G    GQ G G        P  V      Q   VA  L HT+    DG + A+G +
Sbjct: 1082 IRTWGENSKGQLGDGVLGQARFLPTGVRGAFDSQT--VAMSL-HTLVARKDGTIDAWGRD 1138

Query: 380  QFGQLGTG-GDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
             +G+ G   G  A T P+ +  P +  V  +SV+ G R +  +  DG V+ WG + +G L
Sbjct: 1139 HYGEAGDFLGSGARTEPKRI--PGISRV--RSVAVGDRWSMALRKDGSVWTWGISSWGVL 1194

Query: 439  GLGDVIDRNI 448
            G G   D + 
Sbjct: 1195 GDGKGCDSDF 1204



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/249 (26%), Positives = 97/249 (38%), Gaps = 28/249 (11%)

Query: 223  IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP----CIESSYGKD 278
            I  ++A   +  AL   G VWGWG+    Q  LG R      P PIP     +    G  
Sbjct: 1219 IIQISASLYNGYALKKDGTVWGWGFNSYYQ-ELGDRPGC--EPAPIPGLSDIVAIDAGDR 1275

Query: 279  RSAALSRGSVNSEGPG----------FRVPGNY-----VKGIACGGRHSAVITDAGALLT 323
               AL +                   FR P  +     V     G   SA +T  G + T
Sbjct: 1276 FGLALKKDGTLWGWGLGGRGYVDPLYFRSPAQFENLKNVVRFGAGTDSSAAVTADGKIWT 1335

Query: 324  FGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQ 383
            +G   YGQ G         P  +    G     V+ G WH + I +DG V+ +G N  GQ
Sbjct: 1336 WGANYYGQLGIAGASYYTEPVDIHDQSGFI--DVSVGDWHVLGIKADGTVWGWGHNGGGQ 1393

Query: 384  LGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDV 443
            LG G  Q  + P LL    L ++ +  V     ++ ++  +  +   G N  GQLG    
Sbjct: 1394 LGDGTTQTRSTPVLL----LSSIAAAKVYAMGVNSLIMQTNRSLLGSGDNHAGQLGRRMN 1449

Query: 444  IDRNIPSQV 452
            +D + P ++
Sbjct: 1450 MDGSTPQRL 1458


>gi|426248720|ref|XP_004018107.1| PREDICTED: RCC1 domain-containing protein 1 [Ovis aries]
          Length = 307

 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 70/220 (31%), Positives = 107/220 (48%), Gaps = 45/220 (20%)

Query: 297 VPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG 356
            P    + +  G  H+ ++  AG + ++G G +GQ G G+ + E  P  + +L G+++  
Sbjct: 86  APTLRARRLELGAEHALLLDAAGQVFSWGAGRHGQLGHGTLEPEPEPRLLEALQGLRMAE 145

Query: 357 VAAGLWHTICISSDGDVYAFGGNQFGQLG------------TGGDQA------------- 391
           VAAG WH++C+S  GD+Y +G N+ GQL             T G+ +             
Sbjct: 146 VAAGGWHSVCLSETGDIYIWGWNESGQLALPTKSLAEDGKTTAGEASGLDEDGSEVKRVS 205

Query: 392 -------------ETLPRLLD-APSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQ 437
                        +  P LLD +P  E V    VSCG+RHTAV+   G+++ WGW KYGQ
Sbjct: 206 AGEDGAPAPFIAVQPFPALLDLSPGSEAV---KVSCGSRHTAVLTRTGELYTWGWGKYGQ 262

Query: 438 LGLGDVIDRNIPSQVTI---EGCVPRNVACGWWHTLLLAV 474
           LG  D    + P +V     +    R V+CG W+T + AV
Sbjct: 263 LGHKDTTTLDRPCRVEYFVDKQLQVRTVSCGPWNTYVYAV 302



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/212 (28%), Positives = 97/212 (45%), Gaps = 54/212 (25%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEI------PEPFPLPTEA----SIVK 102
           G   A+ +  + ++ +WG+           G+HG++      PEP P   EA     + +
Sbjct: 97  GAEHALLLDAAGQVFSWGA-----------GRHGQLGHGTLEPEPEPRLLEALQGLRMAE 145

Query: 103 AAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPR 162
            AAG  H V ++E G++Y WGW E        G L+  T   K + E             
Sbjct: 146 VAAGGWHSVCLSETGDIYIWGWNES-------GQLALPT---KSLAED------------ 183

Query: 163 SQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVR 222
               +++ G +SG D     E+GS+ +R+S  +  A +       +  FP L+ L+PG  
Sbjct: 184 ---GKTTAGEASGLD-----EDGSEVKRVSAGEDGAPAPFIA---VQPFPALLDLSPGSE 232

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLG 254
              V+ G RHT  L+  G+++ WG+G  GQLG
Sbjct: 233 AVKVSCGSRHTAVLTRTGELYTWGWGKYGQLG 264


>gi|159040146|ref|YP_001539399.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
 gi|157918981|gb|ABW00409.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
          Length = 555

 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 116/421 (27%), Positives = 166/421 (39%), Gaps = 59/421 (14%)

Query: 63  SRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTW 122
           S  ++TWG  +D GQ    +      P    LP   +I   A   A+  A+T  G V  W
Sbjct: 53  SDTVLTWGE-NDFGQLGDGTTIDSSTPVDVDLPAGTTITAIAGSDANSFALTSTGAVLAW 111

Query: 123 GWKECVPSGRVFGDLSTGTGLDKDV-----FERQSSFLTEQVSPRSQVSRSSGGTSSGTD 177
           G           G+L  GT  D+           ++     V     ++ +S G      
Sbjct: 112 G-------NNTGGELGDGTNTDRTTPVAVKLPTGTTVTAIAVGTFHTLALTSTGALLAWG 164

Query: 178 GRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS 237
           G G GE G                  G       P  V +  G  I  +A G  H+LAL+
Sbjct: 165 GNGFGELG-----------------DGTTTARNEPVPVNVPAGTTITAIAGGRGHSLALT 207

Query: 238 DIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRV 297
             G V  WG   EGQLG G+                        A S   V+ + P    
Sbjct: 208 STGTVLAWGKNNEGQLGDGTN-----------------------ANSTTPVDVDLP---- 240

Query: 298 PGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGV 357
           PG  V  IA GG +S  +T AG +L +G    GQ G G+T D  +P  V    G  +  +
Sbjct: 241 PGTTVTAIAGGGSNSFALTSAGTVLAWGLNSSGQVGDGTTTDRSTPVDVDLPPGTTVTAI 300

Query: 358 AAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARH 417
           A G  H++ ++S G V A+G N  GQLG G     T P  ++ P    + + +   G+ H
Sbjct: 301 AGGEGHSVALTSAGTVLAWGLNSSGQLGDGTTTDSTTPVDVNLPPDTTITAITAHDGS-H 359

Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACGWWHTLLLAVPP 476
           +  +   G +  WG N  G+LG G   +R+ P  V +  G     +  G  H++ L  PP
Sbjct: 360 SLALTSTGTILAWGLNSSGELGDGTTTNRSTPVDVNLPPGTTVTAIDNGDDHSMALTAPP 419

Query: 477 T 477
           T
Sbjct: 420 T 420



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 78/341 (22%), Positives = 129/341 (37%), Gaps = 55/341 (16%)

Query: 32  SPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIP 89
           +P+ V+LP   G+    +  G     +A++ +  L+ WG     +LG    T+      P
Sbjct: 129 TPVAVKLP--TGTTVTAIAVGTF-HTLALTSTGALLAWGGNGFGELGDGTTTARNE---P 182

Query: 90  EPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFE 149
            P  +P   +I   A G  H +A+T  G V  WG           G L  GT        
Sbjct: 183 VPVNVPAGTTITAIAGGRGHSLALTSTGTVLAWGKNN-------EGQLGDGTN------A 229

Query: 150 RQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLS 209
             ++ +   + P + V+  +GG      G  S    S    ++    ++     G     
Sbjct: 230 NSTTPVDVDLPPGTTVTAIAGG------GSNSFALTSAGTVLAWGLNSSGQVGDGTTTDR 283

Query: 210 AFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP 269
           + P  V L PG  +  +A G  H++AL+  G V  WG    GQL                
Sbjct: 284 STPVDVDLPPGTTVTAIAGGEGHSVALTSAGTVLAWGLNSSGQL---------------- 327

Query: 270 CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGI-ACGGRHSAVITDAGALLTFGWGL 328
                   D +   S   V+   P    P   +  I A  G HS  +T  G +L +G   
Sbjct: 328 -------GDGTTTDSTTPVDVNLP----PDTTITAITAHDGSHSLALTSTGTILAWGLNS 376

Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISS 369
            G+ G G+T +  +P  V+   G  +  +  G  H++ +++
Sbjct: 377 SGELGDGTTTNRSTPVDVNLPPGTTVTAIDNGDDHSMALTA 417


>gi|357613967|gb|EHJ68816.1| putative X-linked retinitis pigmentosa GTPase regulator [Danaus
           plexippus]
          Length = 733

 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 68/189 (35%), Positives = 102/189 (53%), Gaps = 12/189 (6%)

Query: 289 NSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS 348
           ++E   F +  + +  I+CG  HSAVI + G +  FG   +GQ G G  D+   P+CV  
Sbjct: 44  DNEPSHFFIKNDPIVAISCGDEHSAVICEKGRVFVFGANAWGQLGLGHKDEVTRPSCVKF 103

Query: 349 LLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHS 408
           L   +   VA G  HT+ ++    +Y+ G N  GQLG+G  +  ++P+ +D   LE V  
Sbjct: 104 LKPHRATFVACGRAHTVFVTDTNAIYSVGCNDEGQLGSGDLEHHSVPQYVD---LE-VTV 159

Query: 409 KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT----IEGCVPRNVAC 464
           K VS G+ HTA++ +DG+VF  G N  GQLGLG+  DR      T    +E      V C
Sbjct: 160 KQVSAGSNHTALLTEDGRVFVCGSNSEGQLGLGE--DRRSALSFTELKFMESIAF--VEC 215

Query: 465 GWWHTLLLA 473
           G++HT+ + 
Sbjct: 216 GYYHTVFIT 224



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 90/286 (31%), Positives = 128/286 (44%), Gaps = 48/286 (16%)

Query: 203 SGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMV 262
           SGD    + P  V L   V +  V+AG  HT  L++ G+V+  G   EGQLGL       
Sbjct: 141 SGDLEHHSVPQYVDLE--VTVKQVSAGSNHTALLTEDGRVFVCGSNSEGQLGL------- 191

Query: 263 SSPHPIPCIESSYGKDRSAALSRGSVN-SEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
                        G+DR +ALS   +   E   F         + CG  H+  IT  GA+
Sbjct: 192 -------------GEDRRSALSFTELKFMESIAF---------VECGYYHTVFITAKGAV 229

Query: 322 LTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVAAGLWHTICISSD-GDVYAFGGN 379
              G     + G  +T   L  P  +   L + I+    G  HT  +S D   + AFG N
Sbjct: 230 FVTGDNENQKLGIQNTSSILYVPQVLP--LDVHIKSACCGANHTFLLSMDESKILAFGSN 287

Query: 380 QFGQLGTGGDQAE-TLPRLLDAPSL-ENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQ 437
           + GQLG   +    TLP  +D   + +    K V+CGA HTA + D+G ++  G  ++ +
Sbjct: 288 EKGQLGMPKEVVNVTLPTEIDMEKMFDGYQLKLVACGAMHTAFVTDNGLLYTCGEARHNK 347

Query: 438 LGLGDVID----RNIPSQVT------IEGCVPRNVACGWWHTLLLA 473
           L L +  D     ++P+Q T      + G V  NVACG  HTLL A
Sbjct: 348 LCLEETDDNTNSNDLPNQYTPMRVTAMNGFVIDNVACGGCHTLLTA 393



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 87/345 (25%), Positives = 132/345 (38%), Gaps = 74/345 (21%)

Query: 83  GKHGEIPEP----FPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRV-FGDL 137
           G   E+  P    F  P  A+ V  A G AH V VT+   +Y+ G   C   G++  GDL
Sbjct: 90  GHKDEVTRPSCVKFLKPHRATFV--ACGRAHTVFVTDTNAIYSVG---CNDEGQLGSGDL 144

Query: 138 ---STGTGLDKDVFERQ-------SSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSK 187
              S    +D +V  +Q       ++ LTE        S S G    G D R +      
Sbjct: 145 EHHSVPQYVDLEVTVKQVSAGSNHTALLTEDGRVFVCGSNSEGQLGLGEDRRSALSFTEL 204

Query: 188 RRRISLA--------------------KQTAESSSSGDENLSAFPCLVTLNP-GVRIATV 226
           +   S+A                        E+   G +N S+   +  + P  V I + 
Sbjct: 205 KFMESIAFVECGYYHTVFITAKGAVFVTGDNENQKLGIQNTSSILYVPQVLPLDVHIKSA 264

Query: 227 AAGGRHTLALS-DIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
             G  HT  LS D  ++  +G   +GQLG+   +  V+ P  I  +E  +          
Sbjct: 265 CCGANHTFLLSMDESKILAFGSNEKGQLGMPKEVVNVTLPTEID-MEKMFD--------- 314

Query: 286 GSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDD------ 339
                        G  +K +ACG  H+A +TD G L T G   + +     TDD      
Sbjct: 315 -------------GYQLKLVACGAMHTAFVTDNGLLYTCGEARHNKLCLEETDDNTNSND 361

Query: 340 ---ELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
              + +P  V+++ G  I+ VA G  HT+  ++ G    F  N F
Sbjct: 362 LPNQYTPMRVTAMNGFVIDNVACGGCHTLLTATKGSNVDFTNNDF 406


>gi|270002031|gb|EEZ98478.1| hypothetical protein TcasGA2_TC000971 [Tribolium castaneum]
          Length = 4191

 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 70/204 (34%), Positives = 110/204 (53%), Gaps = 6/204 (2%)

Query: 270  CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
            C    +G DR   L+    ++  P      +  + I CG   + VI   G +L  G G Y
Sbjct: 3327 CKAYMWGSDRHGQLAELGYSASVPVQVESFSIARKIICGQNCTFVIQSDGTVLACGEGSY 3386

Query: 330  GQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW---HTICISSDGDVYAFGGNQFGQLGT 386
            G+ GQG++DD  S + +SSL G  I  +A  +    H++ ++  G+V+++G   FG+LG 
Sbjct: 3387 GRLGQGNSDDLHSLSVISSLQGFVITDLATSVGSDGHSLALAESGEVFSWGDGDFGKLGH 3446

Query: 387  GGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR 446
            G    +  PR ++A   E V    V+CG +H+AV+  DGK+F +G   +G+LGLG V ++
Sbjct: 3447 GNPDRQRRPRQIEALQTEQV--VQVACGFKHSAVVTSDGKLFTFGNGDFGKLGLGSVANK 3504

Query: 447  NIPSQVT-IEGCVPRNVACGWWHT 469
             +P +V  +EG     VACG  HT
Sbjct: 3505 KLPERVMALEGYRIGQVACGLNHT 3528



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 73/213 (34%), Positives = 108/213 (50%), Gaps = 30/213 (14%)

Query: 223  IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
            +AT      H+LAL++ G+V+ WG G  G+LG G+  R    P  I  +++         
Sbjct: 3414 LATSVGSDGHSLALAESGEVFSWGDGDFGKLGHGNPDRQ-RRPRQIEALQTEQ------- 3465

Query: 283  LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                               V  +ACG +HSAV+T  G L TFG G +G+ G GS  ++  
Sbjct: 3466 -------------------VVQVACGFKHSAVVTSDGKLFTFGNGDFGKLGLGSVANKKL 3506

Query: 343  PNCVSSLLGIQIEGVAAGLWHTICISSDG-DVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
            P  V +L G +I  VA GL HT C+S+DG  V+ FG   +G+LG G    + LP+ ++  
Sbjct: 3507 PERVMALEGYRIGQVACGLNHTACVSTDGMTVWTFGEGDYGKLGLGYATMKLLPQKVE-- 3564

Query: 402  SLENVHSKSVSCGARHTAVIADDGKVFCWGWNK 434
            ++ N+  K V CG   T  +  DGKVF  G ++
Sbjct: 3565 TVCNLGIKKVGCGTHLTLFLTKDGKVFVCGIDR 3597



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 74/257 (28%), Positives = 115/257 (44%), Gaps = 41/257 (15%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G  I  + AG RH+ A++D G+++ WG G  G+LG G                + Y   +
Sbjct: 484 GKTIKYIHAGYRHSAAVTDDGKLYTWGEGDHGRLGHGDS-------------NARYVPTQ 530

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL-TFGWGLYGQCGQGSTD 338
            A L+                 V  +ACG  H+ V++  G  + +FG G +G+ G G   
Sbjct: 531 VAGLAE----------------VGSVACGSSHTLVVSKDGKTVWSFGSGEHGKLGTGELG 574

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG-GDQAETLPRL 397
               P  V +L G+ I+ V AG W ++ +++ G+VY +G      LG G  D    LP  
Sbjct: 575 KVYRPQVVEALQGLTIQKVCAGTWFSMALTTAGEVYTWGSGAI--LGKGSADAIVNLPMY 632

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDV---IDRNIPSQVT- 453
           ++   L       +S G  H   + D+ +VF WG N  GQ G G     I R  P +V  
Sbjct: 633 VE--DLAQYRIVDISAGDNHCLALTDEHEVFAWGTNSMGQCGQGHTCSPITR--PLKVIG 688

Query: 454 IEGCVPRNVACGWWHTL 470
           +EG   R ++ G  H++
Sbjct: 689 LEGVSIRQISAGTSHSM 705



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 116/257 (45%), Gaps = 31/257 (12%)

Query: 222  RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
            ++  VA G +H+  ++  G+++ +G G  G+LGLGS             + +    +R  
Sbjct: 3465 QVVQVACGFKHSAVVTSDGKLFTFGNGDFGKLGLGS-------------VANKKLPERVM 3511

Query: 282  ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVI-TDAGALLTFGWGLYGQCGQGSTDDE 340
            AL          G+R     +  +ACG  H+A + TD   + TFG G YG+ G G    +
Sbjct: 3512 ALE---------GYR-----IGQVACGLNHTACVSTDGMTVWTFGEGDYGKLGLGYATMK 3557

Query: 341  LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
            L P  V ++  + I+ V  G   T+ ++ DG V+  G ++        ++A   P+++  
Sbjct: 3558 LLPQKVETVCNLGIKKVGCGTHLTLFLTKDGKVFVCGIDRMPWHSLFRERAVFKPQIM-- 3615

Query: 401  PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVP 459
             SL +   + ++ G  H   +   GKV  WG    GQLGL  V     P  +T +     
Sbjct: 3616 TSLSDYSIEDLAVGTEHVLFLTTCGKVLGWGMTGEGQLGLPHVSLVRHPEIITELSDKGI 3675

Query: 460  RNVACGWWHTLLLAVPP 476
            R ++ G  H+   + PP
Sbjct: 3676 RQISTGRTHSAAWSAPP 3692



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 81/152 (53%), Gaps = 7/152 (4%)

Query: 325 GWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW---HTICISSDGDVYAFGGNQF 381
           G G YG+ G G + ++  P  +  LL   ++ +++      HT+ ++  G VY++G   +
Sbjct: 404 GKGSYGRLGLGESSNQSLPKRI--LLDCVVKKLSSSKGSDGHTLALAETGVVYSWGDGDY 461

Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
           G+LG G       P  +  P L     K +  G RH+A + DDGK++ WG   +G+LG G
Sbjct: 462 GKLGHGNCATHKQPERITGPFLGKT-IKYIHAGYRHSAAVTDDGKLYTWGEGDHGRLGHG 520

Query: 442 DVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           D   R +P+QV     V  +VACG  HTL+++
Sbjct: 521 DSNARYVPTQVAGLAEVG-SVACGSSHTLVVS 551



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 110/238 (46%), Gaps = 32/238 (13%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR--------------IRMVSSP-- 265
           ++  V AG   T A+   G V   G G  G+LGLG                ++ +SS   
Sbjct: 380 QVQQVEAGQYCTFAIHWDGSVSACGKGSYGRLGLGESSNQSLPKRILLDCVVKKLSSSKG 439

Query: 266 ---HPIPCIES----SYGKDRSAALSRGSVNSEGPGFRVPGNY----VKGIACGGRHSAV 314
              H +   E+    S+G      L  G+  +     R+ G +    +K I  G RHSA 
Sbjct: 440 SDGHTLALAETGVVYSWGDGDYGKLGHGNCATHKQPERITGPFLGKTIKYIHAGYRHSAA 499

Query: 315 ITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGD-V 373
           +TD G L T+G G +G+ G G ++    P  V+ L   ++  VA G  HT+ +S DG  V
Sbjct: 500 VTDDGKLYTWGEGDHGRLGHGDSNARYVPTQVAGL--AEVGSVACGSSHTLVVSKDGKTV 557

Query: 374 YAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWG 431
           ++FG  + G+LGTG       P++++A  L+ +  + V  G   +  +   G+V+ WG
Sbjct: 558 WSFGSGEHGKLGTGELGKVYRPQVVEA--LQGLTIQKVCAGTWFSMALTTAGEVYTWG 613



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 86/327 (26%), Positives = 137/327 (41%), Gaps = 73/327 (22%)

Query: 52  GGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGE-IPEPFPLPTEASIVKAAAGWA 108
           G  G  +A++++  + +WG  D   LG     + K  E I  PF      +I    AG+ 
Sbjct: 439 GSDGHTLALAETGVVYSWGDGDYGKLGHGNCATHKQPERITGPF---LGKTIKYIHAGYR 495

Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRS 168
           H  AVT+ G++YTWG  +    GR+      G G      +  + ++  QV+  ++V   
Sbjct: 496 HSAAVTDDGKLYTWGEGD---HGRL------GHG------DSNARYVPTQVAGLAEVGSV 540

Query: 169 SGGTSS----GTDGR-----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
           + G+S       DG+     GSGE G                 +G+      P +V    
Sbjct: 541 ACGSSHTLVVSKDGKTVWSFGSGEHGKL--------------GTGELGKVYRPQVVEALQ 586

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G+ I  V AG   ++AL+  G+V+ WG G    LG GS   +V+ P         Y +D 
Sbjct: 587 GLTIQKVCAGTWFSMALTTAGEVYTWGSG--AILGKGSADAIVNLP--------MYVEDL 636

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDD 339
           +              +R+       I+ G  H   +TD   +  +G    GQCGQG T  
Sbjct: 637 AQ-------------YRIV-----DISAGDNHCLALTDEHEVFAWGTNSMGQCGQGHTCS 678

Query: 340 ELS-PNCVSSLLGIQIEGVAAGLWHTI 365
            ++ P  V  L G+ I  ++AG  H++
Sbjct: 679 PITRPLKVIGLEGVSIRQISAGTSHSM 705



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 47/144 (32%), Positives = 71/144 (49%), Gaps = 11/144 (7%)

Query: 331 QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
           Q  +G+ +  L P  V S +  Q++ V AG + T  I  DG V A G   +G+LG G   
Sbjct: 360 QLAEGNQEKILMP--VKSKMFTQVQQVEAGQYCTFAIHWDGSVSACGKGSYGRLGLGESS 417

Query: 391 AETLPR--LLDAPSLENVHSKSVSCGAR-HTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
            ++LP+  LLD      V   S S G+  HT  +A+ G V+ WG   YG+LG G+     
Sbjct: 418 NQSLPKRILLDCV----VKKLSSSKGSDGHTLALAETGVVYSWGDGDYGKLGHGNCATHK 473

Query: 448 IPSQVT--IEGCVPRNVACGWWHT 469
            P ++T    G   + +  G+ H+
Sbjct: 474 QPERITGPFLGKTIKYIHAGYRHS 497



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 99/400 (24%), Positives = 152/400 (38%), Gaps = 80/400 (20%)

Query: 38   LPLTVGS---AWRDVCGGGCGFAMAISDSRKL---------ITWGSTDDLGQSYVTSGKH 85
            +P+ V S   A + +CG  C F +  SD   L         +  G++DDL    V S   
Sbjct: 3349 VPVQVESFSIARKIICGQNCTFVIQ-SDGTVLACGEGSYGRLGQGNSDDLHSLSVISSLQ 3407

Query: 86   GEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDK 145
            G +           +  +     H +A+ E GEV++WG  +       FG L  G   D+
Sbjct: 3408 GFVI--------TDLATSVGSDGHSLALAESGEVFSWGDGD-------FGKLGHGNP-DR 3451

Query: 146  DVFERQSSFL-TEQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAES 200
                RQ   L TEQV   +   + S   +S  DG+    G+G+ G    ++ L       
Sbjct: 3452 QRRPRQIEALQTEQVVQVACGFKHSAVVTS--DGKLFTFGNGDFG----KLGLG------ 3499

Query: 201  SSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQ-VWGWGYGGEGQLGLGSRI 259
             S  ++ L   P  V    G RI  VA G  HT  +S  G  VW +G G  G+LGLG   
Sbjct: 3500 -SVANKKL---PERVMALEGYRIGQVACGLNHTACVSTDGMTVWTFGEGDYGKLGLG--- 3552

Query: 260  RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAG 319
                           Y   +       +V + G         +K + CG   +  +T  G
Sbjct: 3553 ---------------YATMKLLPQKVETVCNLG---------IKKVGCGTHLTLFLTKDG 3588

Query: 320  ALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN 379
             +   G                 P  ++SL    IE +A G  H + +++ G V  +G  
Sbjct: 3589 KVFVCGIDRMPWHSLFRERAVFKPQIMTSLSDYSIEDLAVGTEHVLFLTTCGKVLGWGMT 3648

Query: 380  QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
              GQLG         P ++   S + +  + +S G  H+A
Sbjct: 3649 GEGQLGLPHVSLVRHPEIITELSDKGI--RQISTGRTHSA 3686



 Score = 46.6 bits (109), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 73/302 (24%), Positives = 114/302 (37%), Gaps = 62/302 (20%)

Query: 52   GGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCV 111
            G  G ++A+++S ++ +WG   D G+    +      P          +V+ A G+ H  
Sbjct: 3419 GSDGHSLALAESGEVFSWGD-GDFGKLGHGNPDRQRRPRQIEALQTEQVVQVACGFKHSA 3477

Query: 112  AVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSS---FLTEQVS--PRSQVS 166
             VT  G+++T+G  +       FG L  G+  +K + ER  +   +   QV+        
Sbjct: 3478 VVTSDGKLFTFGNGD-------FGKLGLGSVANKKLPERVMALEGYRIGQVACGLNHTAC 3530

Query: 167  RSSGGTSSGTDGRGS-GEEGSKRRRISLAKQTAES------------------------- 200
             S+ G +  T G G  G+ G     + L  Q  E+                         
Sbjct: 3531 VSTDGMTVWTFGEGDYGKLGLGYATMKLLPQKVETVCNLGIKKVGCGTHLTLFLTKDGKV 3590

Query: 201  ----------SSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGE 250
                       S   E     P ++T      I  +A G  H L L+  G+V GWG  GE
Sbjct: 3591 FVCGIDRMPWHSLFRERAVFKPQIMTSLSDYSIEDLAVGTEHVLFLTTCGKVLGWGMTGE 3650

Query: 251  GQLGLGSRIRMVSSPHPIPCI------ESSYGKDRSAALSRGSVNSEGPG------FRVP 298
            GQLGL   + +V  P  I  +      + S G+  SAA S   +    PG      F +P
Sbjct: 3651 GQLGL-PHVSLVRHPEIITELSDKGIRQISTGRTHSAAWSAPPLPQRVPGVTRSLTFGLP 3709

Query: 299  GN 300
             N
Sbjct: 3710 AN 3711



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 68/153 (44%), Gaps = 14/153 (9%)

Query: 330 GQCGQGSTDDELSPNCVSSLLGIQIE--GVAAGLWHT----ICISSDGDVYAFGGNQFGQ 383
           GQ     +  E + N +  L G+ I+  GV + +  T    + +    DVY +G N   Q
Sbjct: 301 GQTSSEVSVYEAAINLMEILAGMAIDFGGVCSAVETTSESEVGVYEKSDVYVWGSNSSHQ 360

Query: 384 LGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDV 443
           L  G  +   +P      S      + V  G   T  I  DG V   G   YG+LGLG+ 
Sbjct: 361 LAEGNQEKILMP----VKSKMFTQVQQVEAGQYCTFAIHWDGSVSACGKGSYGRLGLGES 416

Query: 444 IDRNIPSQVTIEGCVPRNVACGW---WHTLLLA 473
            ++++P ++ ++ CV + ++       HTL LA
Sbjct: 417 SNQSLPKRILLD-CVVKKLSSSKGSDGHTLALA 448



 Score = 40.4 bits (93), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 3/81 (3%)

Query: 43  GSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVK 102
           G   + VC G   F+MA++ + ++ TWGS   LG+   ++     +P       +  IV 
Sbjct: 587 GLTIQKVCAG-TWFSMALTTAGEVYTWGSGAILGKG--SADAIVNLPMYVEDLAQYRIVD 643

Query: 103 AAAGWAHCVAVTEGGEVYTWG 123
            +AG  HC+A+T+  EV+ WG
Sbjct: 644 ISAGDNHCLALTDEHEVFAWG 664


>gi|195482069|ref|XP_002101897.1| GE17877 [Drosophila yakuba]
 gi|194189421|gb|EDX03005.1| GE17877 [Drosophila yakuba]
          Length = 2660

 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 134/306 (43%), Gaps = 80/306 (26%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GG+H LAL+  G+V+ WG G +G+LG G+R+              SY + + 
Sbjct: 1884 VKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRM--------------SYDRPKL 1929

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                            + G  V  IACG  HSA IT +G +LT+G G YG+ G G ++D+
Sbjct: 1930 VE-------------HLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQ 1976

Query: 341  LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V +LLG +   +A  +G   T+CI+ D +V+++G   +G+LG GG     LP  +
Sbjct: 1977 LRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKI 2036

Query: 399  DA--------------------------------------------------PSLENVHS 408
            ++                                                   +L+    
Sbjct: 2037 ESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKI 2096

Query: 409  KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWW 467
             S++ G+ H    +D G+V+ WG N  GQLG G V     P  V  ++G     V CG  
Sbjct: 2097 ISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSA 2156

Query: 468  HTLLLA 473
            HTL L+
Sbjct: 2157 HTLALS 2162



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 122/255 (47%), Gaps = 36/255 (14%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GG+H LAL+  G+V+ WG G +G+LG G+R              ++  K R 
Sbjct: 819  VKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNR--------------TTLDKPRL 864

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                R                ++ +ACG  HSA I+  G L T+G G YG+ G G    +
Sbjct: 865  VEALR-------------AKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQ 911

Query: 341  LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V++L G ++  VA G     T+ ++ DG V+++G   FG+LG GG +    P  +
Sbjct: 912  LKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEI 971

Query: 399  DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCV 458
            +   L  +    + CGA+ +  +   G+V+ WG   Y +LG G   D+++     I G  
Sbjct: 972  E--RLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGG--DQHVRKPQPIGGLR 1027

Query: 459  PR---NVACGWWHTL 470
             R   +VA G  H L
Sbjct: 1028 GRRVIHVAVGALHCL 1042



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 96/324 (29%), Positives = 136/324 (41%), Gaps = 50/324 (15%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V   +G  HC+A+T  GEVY WG  E        G L  G  +  D        L E ++
Sbjct: 1887 VAVNSGGKHCLALTTEGEVYAWGEGE-------DGKLGHGNRMSYD-----RPKLVEHLN 1934

Query: 161  PRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPG 220
              S V+  + G++       SG        ++  K        GD      P LV    G
Sbjct: 1935 GMS-VADIACGSAHSAAITASGHV------LTWGKGRYGRLGHGDSEDQLRPKLVEALLG 1987

Query: 221  VRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
             R   +A  +G   TL ++D   VW WG G  G+LG G      S    +P     Y  +
Sbjct: 1988 YRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGG-----SDGCKLP-----YKIE 2037

Query: 279  RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
              A L                  V  + CG + S  +T +GA+ T+G G + + G GS D
Sbjct: 2038 SLAGLG-----------------VVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVD 2080

Query: 339  DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
                P  V++L G +I  +A G  H +  S  G+VY +G N  GQLG G   A   PRL+
Sbjct: 2081 HVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLV 2140

Query: 399  DAPSLENVHSKSVSCGARHTAVIA 422
             A  L+  H   V+CG+ HT  ++
Sbjct: 2141 AA--LQGKHIVKVTCGSAHTLALS 2162



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 115/255 (45%), Gaps = 30/255 (11%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           +R   +A G +    +S  G+V+  G G  G+LGLG     V  PH +P +     K  +
Sbjct: 765 LRPIHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLGV-THNVPLPHQLPVLHQYVVKKVA 823

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                   +  GG+H+  +T  G + ++G G  G+ G G+    
Sbjct: 824 ------------------------VHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTL 859

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
             P  V +L   +I  VA G  H+  ISS G++Y +G  ++G+LG G +  +  P+L+ A
Sbjct: 860 DKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVTA 919

Query: 401 PSLENVHSKSVSCGAR--HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGC 457
             L       V+CG+R   T  + +DG VF WG   +G+LG G     + P ++  + G 
Sbjct: 920 --LAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGI 977

Query: 458 VPRNVACGWWHTLLL 472
               + CG   +L L
Sbjct: 978 GVVQIECGAQFSLAL 992



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 108/386 (27%), Positives = 152/386 (39%), Gaps = 73/386 (18%)

Query: 56   FAMAISDSRKLITWGSTDDL------GQSYV----TSGKHG-----EIPEPFPLPT-EAS 99
            F+  IS  R +   G +  L      G+ Y     T+G+ G      +P P  LP     
Sbjct: 758  FSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQY 817

Query: 100  IVKAAA---GWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLT 156
            +VK  A   G  H +A+T  G+V++WG  E        G L  G     D      +   
Sbjct: 818  VVKKVAVHSGGKHALALTLDGKVFSWGEGE-------DGKLGHGNRTTLDKPRLVEALRA 870

Query: 157  EQVSPRSQVSRSSGGTSSGTDGR--GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCL 214
            +++   +  S  S   SS  +    G GE G                  GD      P L
Sbjct: 871  KKIRDVACGSSHSAAISSQGELYTWGLGEYGRL--------------GHGDNATQLKPKL 916

Query: 215  VTLNPGVRIATVAAGGR--HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIE 272
            VT   G R+  VA G R   TLAL++ G V+ WG G  G+LG G       +PH I    
Sbjct: 917  VTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGS-EGSDTPHEIE--- 972

Query: 273  SSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQC 332
                                   R+ G  V  I CG + S  +T AG + T+G G Y + 
Sbjct: 973  -----------------------RLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRL 1009

Query: 333  GQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAE 392
            G G       P  +  L G ++  VA G  H + ++  G VYA+G N  GQ G+G     
Sbjct: 1010 GHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVN 1069

Query: 393  TLPRLLDAPSLENVHSKSVSCGARHT 418
              P L+    L+ V    V+CG+ H+
Sbjct: 1070 KKPALVIG--LDAVFVNRVACGSSHS 1093



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 107/229 (46%), Gaps = 36/229 (15%)

Query: 242  VWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPG 299
            ++GWG+   GQLG   GSRI+      P PC                    E      P 
Sbjct: 1799 IYGWGHNHRGQLGGLEGSRIKT-----PTPC--------------------EALSLLRPV 1833

Query: 300  NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA- 358
                 +A G +    +T  G L   G+G  G+ G G +D    P  + SL  + ++ VA 
Sbjct: 1834 Q----LAGGEQSLFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAV 1889

Query: 359  -AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARH 417
             +G  H + ++++G+VYA+G  + G+LG G   +   P+L++   L  +    ++CG+ H
Sbjct: 1890 NSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVE--HLNGMSVADIACGSAH 1947

Query: 418  TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
            +A I   G V  WG  +YG+LG GD  D+  P  V  + G    ++ACG
Sbjct: 1948 SAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACG 1996



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 89/345 (25%), Positives = 135/345 (39%), Gaps = 60/345 (17%)

Query: 24   LPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDD--LGQSYVT 81
            LP + P+L   VV+         +     G   A+A++   K+ +WG  +D  LG    T
Sbjct: 807  LPHQLPVLHQYVVK---------KVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRT 857

Query: 82   SGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGT 141
            +     + E         I   A G +H  A++  GE+YTWG  E    GR  G     T
Sbjct: 858  TLDKPRLVEAL---RAKKIRDVACGSSHSAAISSQGELYTWGLGE---YGR-LGHGDNAT 910

Query: 142  GLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGR-GSGEEGSKRRRISLAKQTAES 200
             L   +    +     QV+  S+ +++   T  G     G G+ G       L +  +E 
Sbjct: 911  QLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFG------KLGRGGSEG 964

Query: 201  SSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR 260
            S +  E        +    G+ +  +  G + +LAL+  G+VW WG G   +LG G   +
Sbjct: 965  SDTPHE--------IERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGD-Q 1015

Query: 261  MVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA 320
             V  P PI                         G R  G  V  +A G  H   +TDAG 
Sbjct: 1016 HVRKPQPI------------------------GGLR--GRRVIHVAVGALHCLAVTDAGQ 1049

Query: 321  LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTI 365
            +  +G   +GQ G G+T     P  V  L  + +  VA G  H+I
Sbjct: 1050 VYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSI 1094



 Score = 47.0 bits (110), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 78/157 (49%), Gaps = 9/157 (5%)

Query: 319  GALLTFGWGL--YGQCG--QGSTDDELSP-NCVSSLLGIQIEGVAAGLWHTICISSDGDV 373
            GA   +GWG    GQ G  +GS     +P   +S L  +Q+ G    L+    ++ DG +
Sbjct: 1795 GASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLF---AVTPDGKL 1851

Query: 374  YAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWN 433
            +A G    G+LG GG  +  +P LL +     V   +V+ G +H   +  +G+V+ WG  
Sbjct: 1852 FATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEG 1911

Query: 434  KYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHT 469
            + G+LG G+ +  + P  V  + G    ++ACG  H+
Sbjct: 1912 EDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHS 1948


>gi|125821491|ref|XP_698091.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
            rerio]
          Length = 4846

 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 85/298 (28%), Positives = 131/298 (43%), Gaps = 79/298 (26%)

Query: 232  HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
            H++AL++ G+V+ WG G  G+LG G+  R    P  I  ++                   
Sbjct: 4078 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQ------------------- 4117

Query: 292  GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                   G  V  ++CG +HSAV+T  G L +FG G YG+ G G+T ++  P  VS+L G
Sbjct: 4118 -------GEEVVQMSCGFKHSAVVTSDGKLFSFGNGDYGRLGLGNTSNKKLPERVSALEG 4170

Query: 352  IQIEGVAAGLWHTICISSDG-DVYAFGGNQFGQLGTGGDQAETLPRLLDA---------- 400
             Q+  VA GL HT+ +S+DG  V+AFG   +G+LG G   A++ P+ +D           
Sbjct: 4171 HQVGQVACGLNHTLAVSADGMTVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVA 4230

Query: 401  ----------------------------------------PSLENVHSKSVSCGARHTAV 420
                                                    P+L  V  + V+ GA HT  
Sbjct: 4231 CGTQFSVALTKDGNVYTFGQDRLIGLPEGRARNHNRPQQVPALTGVFIEDVAVGAEHTLT 4290

Query: 421  IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLAVPPT 477
            ++  G V+ WG N  GQLGLG       P+ ++ ++G   + ++ G  H+     PP 
Sbjct: 4291 LSSTGDVYAWGSNSEGQLGLGHTNHVREPTLISALQGKNIQQISAGRCHSAAWTAPPV 4348



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/200 (31%), Positives = 104/200 (52%), Gaps = 6/200 (3%)

Query: 275  YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
            +G  R   L+    N   P      +  + + CG   + VI   G +   G G YG+ GQ
Sbjct: 3987 WGAGRHGQLAEAGRNILVPTLAPSFSQAQQVVCGQNCTFVIQANGTVSACGEGSYGRLGQ 4046

Query: 335  GSTDDELSPNCVSSLLGIQIEGVAAGLW---HTICISSDGDVYAFGGNQFGQLGTGGDQA 391
            G++DD      +S+L G  +  +        H++ ++  G+V+++G   +G+LG G    
Sbjct: 4047 GNSDDLHVLTVISALQGFVVTQMVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDR 4106

Query: 392  ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
            +  PR ++A   E V    +SCG +H+AV+  DGK+F +G   YG+LGLG+  ++ +P +
Sbjct: 4107 QRRPRQIEALQGEEV--VQMSCGFKHSAVVTSDGKLFSFGNGDYGRLGLGNTSNKKLPER 4164

Query: 452  VT-IEGCVPRNVACGWWHTL 470
            V+ +EG     VACG  HTL
Sbjct: 4165 VSALEGHQVGQVACGLNHTL 4184



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 122/421 (28%), Positives = 178/421 (42%), Gaps = 78/421 (18%)

Query: 14   VFMWGY-LPGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISD--------SR 64
            VF+WG    G L +    +  LV  L  +   A + VCG  C F +  +         S 
Sbjct: 3984 VFLWGAGRHGQLAEAGRNI--LVPTLAPSFSQAQQVVCGQNCTFVIQANGTVSACGEGSY 4041

Query: 65   KLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGW 124
              +  G++DDL    V S   G +           +V +     H +A+TE GEV++WG 
Sbjct: 4042 GRLGQGNSDDLHVLTVISALQGFVV--------TQMVTSCGSDGHSMALTESGEVFSWGD 4093

Query: 125  KECVPSGRVFGDLSTGTGLDKDVFERQSSFLT-EQVSPRSQVSRSSGGTSSGTDGR---- 179
             +       +G L  G   D+    RQ   L  E+V   S   + S   +S  DG+    
Sbjct: 4094 GD-------YGKLGHGNS-DRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS--DGKLFSF 4143

Query: 180  GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDI 239
            G+G+ G    R+ L          G+ +    P  V+   G ++  VA G  HTLA+S  
Sbjct: 4144 GNGDYG----RLGL----------GNTSNKKLPERVSALEGHQVGQVACGLNHTLAVSAD 4189

Query: 240  GQ-VWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVP 298
            G  VW +G G  G+LGLG+     SSP  +  +                           
Sbjct: 4190 GMTVWAFGDGDYGKLGLGNSTAK-SSPQKVDVL--------------------------C 4222

Query: 299  GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
            G  +K +ACG + S  +T  G + TFG        +G   +   P  V +L G+ IE VA
Sbjct: 4223 GIGIKKVACGTQFSVALTKDGNVYTFGQDRLIGLPEGRARNHNRPQQVPALTGVFIEDVA 4282

Query: 359  AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
             G  HT+ +SS GDVYA+G N  GQLG G       P L+ A   +N+  + +S G  H+
Sbjct: 4283 VGAEHTLTLSSTGDVYAWGSNSEGQLGLGHTNHVREPTLISALQGKNI--QQISAGRCHS 4340

Query: 419  A 419
            A
Sbjct: 4341 A 4341



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 109/423 (25%), Positives = 177/423 (41%), Gaps = 61/423 (14%)

Query: 55  GFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVT 114
           G A  +S++ ++  WGS        +  G   +I +P   P+ +      AG      ++
Sbjct: 358 GEAAMVSETCEVYVWGSN---SSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVIS 414

Query: 115 EGGEVYTWGWKECVPSGRV-FGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTS 173
             G V   G       GR+  GD +  + L K  FE           P   + + S  +S
Sbjct: 415 SDGSVRACGKGS---YGRLGLGDSNNQSTLKKLTFE-----------PHRAIKKVS--SS 458

Query: 174 SGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP--GVRIATVAAGGR 231
            G+DG       S+    S           G+ +   +P L+   P  G  +  V+AG R
Sbjct: 459 KGSDGHTLAFT-SEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQ-GPLQGKVVVCVSAGYR 516

Query: 232 HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
           H+ A+S+ G+++ WG G  G+LG G      S+   IP +     KD S           
Sbjct: 517 HSAAVSEDGELYTWGEGDFGRLGHGD-----SNSRNIPTL----VKDISN---------- 557

Query: 292 GPGFRVPGNYVKGIACGGRHSAVITDAGALL-TFGWGLYGQCGQGSTDDELSPNCVSSLL 350
                     V  ++CG  H+  ++  G  + +FG G  G+ G G T+    P  V +L 
Sbjct: 558 ----------VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQ 607

Query: 351 GIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL-PRLLDAPSLENVHSK 409
           G+ I  V AG   ++ ++S G VYA+G      LG G  +A  L P+L++   L      
Sbjct: 608 GMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE--ELATTRVV 663

Query: 410 SVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVI-DRNIPSQVT-IEGCVPRNVACGWW 467
            +S G  H   ++ D +V+ WG N  GQ G G+       P +V  ++G   + ++ G  
Sbjct: 664 DISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVIGLDGVAIQQISAGTS 723

Query: 468 HTL 470
           H+L
Sbjct: 724 HSL 726



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 54/174 (31%), Positives = 96/174 (55%), Gaps = 5/174 (2%)

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
           + I  G   + VI+  G++   G G YG+ G G ++++ +   ++      I+ V++   
Sbjct: 401 QTIEAGQYCTFVISSDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKG 460

Query: 363 ---HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
              HT+  +S+G+V+++G   +G+LG G    +  P+L+  P L+      VS G RH+A
Sbjct: 461 SDGHTLAFTSEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCVSAGYRHSA 519

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
            +++DG+++ WG   +G+LG GD   RNIP+ V     V   V+CG  HT+ L+
Sbjct: 520 AVSEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG-EVSCGSSHTIALS 572



 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 112/258 (43%), Gaps = 45/258 (17%)

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLG------SRIRMVSSPH-PIPCIESSYGK 277
           T+ AG   T  +S  G V   G G  G+LGLG      +  ++   PH  I  + SS G 
Sbjct: 402 TIEAGQYCTFVISSDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGS 461

Query: 278 DRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST 337
           D                                H+   T  G + ++G G YG+ G G++
Sbjct: 462 D-------------------------------GHTLAFTSEGEVFSWGDGDYGKLGHGNS 490

Query: 338 DDELSPNCVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPR 396
             +  P  +   L G  +  V+AG  H+  +S DG++Y +G   FG+LG G   +  +P 
Sbjct: 491 STQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEGDFGRLGHGDSNSRNIPT 550

Query: 397 LLDAPSLENVHSKSVSCGARHTAVIADDGK-VFCWGWNKYGQLGLGDVIDRNIPSQV-TI 454
           L+    + NV    VSCG+ HT  ++ DG+ V+ +G    G+LG GD      P  V  +
Sbjct: 551 LVK--DISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEAL 606

Query: 455 EGCVPRNVACGWWHTLLL 472
           +G   R V  G   +L L
Sbjct: 607 QGMFIRKVCAGSQSSLAL 624



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 86/324 (26%), Positives = 131/324 (40%), Gaps = 67/324 (20%)

Query: 52  GGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVK-AAAGWA 108
           G  G  +A +   ++ +WG  D   LG    ++ K+   P+    P +  +V   +AG+ 
Sbjct: 460 GSDGHTLAFTSEGEVFSWGDGDYGKLGHGNSSTQKY---PKLIQGPLQGKVVVCVSAGYR 516

Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRS 168
           H  AV+E GE+YTWG  +       FG L  G     D   R    L + +S   +VS  
Sbjct: 517 HSAAVSEDGELYTWGEGD-------FGRLGHG-----DSNSRNIPTLVKDISNVGEVSCG 564

Query: 169 SGGTSS-GTDGR-----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVR 222
           S  T +   DGR     G G+ G                  GD N    P +V    G+ 
Sbjct: 565 SSHTIALSKDGRTVWSFGGGDNGKL--------------GHGDTNRVYKPKVVEALQGMF 610

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V AG + +LAL+  GQV+ WG G    LG GS       P  I  + ++   D    
Sbjct: 611 IRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELATTRVVD---- 664

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                                 I+ G  H   ++    +  +G    GQCGQG++   ++
Sbjct: 665 ----------------------ISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPIT 702

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTI 365
            P  V  L G+ I+ ++AG  H++
Sbjct: 703 KPKKVIGLDGVAIQQISAGTSHSL 726


>gi|299471207|emb|CBN79063.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 513

 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 89/298 (29%), Positives = 144/298 (48%), Gaps = 43/298 (14%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR----- 258
           GD N    P LV       +  VA G  HT+ LS+ G V+ WG G +G+LG G       
Sbjct: 23  GDTNDQDRPVLVDALKSKGVVQVACGSGHTVVLSEDGAVYTWGRGDDGRLGHGDNGWKYV 82

Query: 259 IRMVSSPHPIPCIESSYGKDRSAALS-RGSVNSEGPG---------------------FR 296
            R+V +      ++++ G   +AA++ +G + + G G                      R
Sbjct: 83  PRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKLGHGNESGHPTPCMVKHLR 142

Query: 297 VPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD-DELSPNCVSSLLGIQIE 355
             G  V  IACG RH+ V+TD G + T+G    G  G  + D  +  P  + SL    + 
Sbjct: 143 DEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVT 202

Query: 356 GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGA 415
            VAA  +HT  +++ G+++ +G  +FG+LG G ++ + +PR+++A   + V    V+CG 
Sbjct: 203 QVAACGFHTAALTAAGEIFTWGEGKFGRLGHGMERNQMVPRMVEALMGKRV--GHVACGG 260

Query: 416 RHTAVIADDGKVFCWGWNKYGQ-----------LGLGDVIDRNIPSQVTIEGCVPRNV 462
            H+A I D G+++ WG  ++GQ           LG GDV   ++P+ V   G V  +V
Sbjct: 261 FHSAAILDSGELYTWGGGEHGQVYTFGNGDHGKLGHGDVRKVSVPTLVA--GLVKMHV 316



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 128/259 (49%), Gaps = 31/259 (11%)

Query: 240 GQVWGWGYGGEGQLGLG-----SRIRMVSSPHPIPCIESSYGKDRSAALSR-GSVNSEGP 293
           G V+ WG G +GQLGLG      R  +V +      ++ + G   +  LS  G+V + G 
Sbjct: 7   GLVYSWGRGEDGQLGLGDTNDQDRPVLVDALKSKGVVQVACGSGHTVVLSEDGAVYTWGR 66

Query: 294 G------------FRVP-------GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
           G              VP       G  +    CG  H+A +TD G L T+G G+YG+ G 
Sbjct: 67  GDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKLGH 126

Query: 335 GSTDDELSPNCVSSLL--GIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLG-TGGDQA 391
           G+     +P  V  L   G ++  +A G  HT+ ++  G VY +G  + G +G T  D  
Sbjct: 127 GNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGH 186

Query: 392 ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
           + LPR+L++   + V ++  +CG  HTA +   G++F WG  K+G+LG G   ++ +P  
Sbjct: 187 QYLPRMLESLQAKTV-TQVAACGF-HTAALTAAGEIFTWGEGKFGRLGHGMERNQMVPRM 244

Query: 452 V-TIEGCVPRNVACGWWHT 469
           V  + G    +VACG +H+
Sbjct: 245 VEALMGKRVGHVACGGFHS 263



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 57/158 (36%), Positives = 85/158 (53%), Gaps = 5/158 (3%)

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
           AG + ++G G  GQ G G T+D+  P  V +L    +  VA G  HT+ +S DG VY +G
Sbjct: 6   AGLVYSWGRGEDGQLGLGDTNDQDRPVLVDALKSKGVVQVACGSGHTVVLSEDGAVYTWG 65

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQ 437
               G+LG G +  + +PR+++A  LE       +CG+ HTA + D G+++ WG   YG+
Sbjct: 66  RGDDGRLGHGDNGWKYVPRIVEA--LEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGK 123

Query: 438 LGLGDVIDRNIPSQVTI---EGCVPRNVACGWWHTLLL 472
           LG G+      P  V     EG     +ACG  HT++L
Sbjct: 124 LGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVL 161



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 116/264 (43%), Gaps = 53/264 (20%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
           GD      P +V    G RI     G  HT A++D G+++ WG G  G+LG G+      
Sbjct: 75  GDNGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKLGHGNE----- 129

Query: 264 SPHPIPCIESSYGKDRSAALSR----------------------------GSVNSEGPGF 295
           S HP PC+   + +D  A +++                            G  N++G  +
Sbjct: 130 SGHPTPCM-VKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQY 188

Query: 296 ------RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSL 349
                  +    V  +A  G H+A +T AG + T+G G +G+ G G   +++ P  V +L
Sbjct: 189 LPRMLESLQAKTVTQVAACGFHTAALTAAGEIFTWGEGKFGRLGHGMERNQMVPRMVEAL 248

Query: 350 LGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQ-----------LGTGGDQAETLPRLL 398
           +G ++  VA G +H+  I   G++Y +GG + GQ           LG G  +  ++P L+
Sbjct: 249 MGKRVGHVACGGFHSAAILDSGELYTWGGGEHGQVYTFGNGDHGKLGHGDVRKVSVPTLV 308

Query: 399 DAPSLENVHSKSVSCGARHTAVIA 422
               L  +H   V+    HTA +A
Sbjct: 309 --AGLVKMHVVKVASYNEHTAALA 330



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 90/334 (26%), Positives = 136/334 (40%), Gaps = 69/334 (20%)

Query: 53  GCGFAMAISDSRKLITWGSTDD--LGQSYVTSGKHG--EIPEPFPLPTEASIVKAAAGWA 108
           G G  + +S+   + TWG  DD  LG      G +G   +P          IV+A  G  
Sbjct: 48  GSGHTVVLSEDGAVYTWGRGDDGRLGH-----GDNGWKYVPRIVEALEGQRIVQATCGSY 102

Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTG--TGLDKDVFERQSSFLTEQVSPRSQVS 166
           H  AVT+ GE+YTWG       G ++G L  G  +G       +    L ++ +  +Q++
Sbjct: 103 HTAAVTDKGELYTWG-------GGMYGKLGHGNESGHPTPCMVKH---LRDEGARVTQIA 152

Query: 167 RSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATV 226
             S  T   TD       G K   +        +++ G + L   P ++       +  V
Sbjct: 153 CGSRHTVVLTDLGKVYTWGDKENGV-----VGHTNADGHQYL---PRMLESLQAKTVTQV 204

Query: 227 AAGGRHTLALSDIGQVWGWGYGGEGQLGLG-SRIRMVSSPHPIPCIESSYGKDRSAALSR 285
           AA G HT AL+  G+++ WG G  G+LG G  R +MV  P  +  +              
Sbjct: 205 AACGFHTAALTAAGEIFTWGEGKFGRLGHGMERNQMV--PRMVEAL-------------- 248

Query: 286 GSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL-----------LTFGWGLYGQCGQ 334
                        G  V  +ACGG HSA I D+G L            TFG G +G+ G 
Sbjct: 249 ------------MGKRVGHVACGGFHSAAILDSGELYTWGGGEHGQVYTFGNGDHGKLGH 296

Query: 335 GSTDDELSPNCVSSLLGIQIEGVAAGLWHTICIS 368
           G       P  V+ L+ + +  VA+   HT  ++
Sbjct: 297 GDVRKVSVPTLVAGLVKMHVVKVASYNEHTAALA 330


>gi|159038541|ref|YP_001537794.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
 gi|157917376|gb|ABV98803.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
          Length = 561

 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 106/398 (26%), Positives = 160/398 (40%), Gaps = 73/398 (18%)

Query: 87  EIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKD 146
             P    LP + +I   AAG  H +AVT  G V  WG           G L  GT   + 
Sbjct: 82  STPVTVDLPADTTITAVAAGQGHSLAVTSAGTVLAWGANSS-------GQLGDGTTTPRS 134

Query: 147 V-----FERQSSFLTEQVSPRSQVSRSSGGT--SSGTDGRGSGEEGSKRRRISLAKQTAE 199
                     ++        R  ++ +S GT  + G +  G   +G+             
Sbjct: 135 TPVAVDLPAGTTVTAVAAGDRHSLAVTSTGTVLAWGLNVTGQLYDGTTTTN--------- 185

Query: 200 SSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
                    S+ P +V L  G  +  VAAG  H+LAL+  G V  WG    GQLG G+  
Sbjct: 186 ---------SSTPIVVDLPAGTTVTAVAAGNAHSLALTSAGTVLAWGANSSGQLGDGT-- 234

Query: 260 RMVSSPHPIP-CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDA 318
              ++P   P  ++   G   S   +  S                       HS  +T  
Sbjct: 235 ---TTPRSTPVAVDLPAGTTISTIAASSS----------------------SHSLAVTST 269

Query: 319 GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           G +L +G    GQ G G+  +  +P  V    G  +  VA G  H++ ++S G + A+GG
Sbjct: 270 GTMLAWGANFTGQLGDGTITNRSTPVAVDLPAGTTVTAVATGSGHSLAVTSTGTMLAWGG 329

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQLG G   + + P  +D P+   V   +V+ GA H+  +   G +  WG+N  GQL
Sbjct: 330 NGSGQLGDGSTTSSSTPVAVDLPAGTTV--TAVAGGAGHSLALTSTGTMLAWGFNTSGQL 387

Query: 439 GLGDVIDR------NIPSQVTIEGCVPRNVACGWWHTL 470
           G G   +R      ++P+  TI       +A G +H+L
Sbjct: 388 GDGTTSNRSTPIATDLPADTTITA-----IAGGSFHSL 420



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 70/153 (45%), Gaps = 6/153 (3%)

Query: 324 FGWG--LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             WG     Q G G+T +  +P  V       I  VAAG  H++ ++S G V A+G N  
Sbjct: 63  LAWGDNAESQLGDGTTTNRSTPVTVDLPADTTITAVAAGQGHSLAVTSAGTVLAWGANSS 122

Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
           GQLG G     + P  +D P+   V   +V+ G RH+  +   G V  WG N  GQL  G
Sbjct: 123 GQLGDGTTTPRSTPVAVDLPAGTTV--TAVAAGDRHSLAVTSTGTVLAWGLNVTGQLYDG 180

Query: 442 -DVIDRNIPSQVTI-EGCVPRNVACGWWHTLLL 472
               + + P  V +  G     VA G  H+L L
Sbjct: 181 TTTTNSSTPIVVDLPAGTTVTAVAAGNAHSLAL 213



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 89/346 (25%), Positives = 138/346 (39%), Gaps = 60/346 (17%)

Query: 28  SPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYV-TSGKHG 86
           +P  +P+ V LP   G+    V  G    ++A++ +  ++ WG  +  GQ Y  T+  + 
Sbjct: 131 TPRSTPVAVDLP--AGTTVTAVAAGDR-HSLAVTSTGTVLAWG-LNVTGQLYDGTTTTNS 186

Query: 87  EIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLST---GTGL 143
             P    LP   ++   AAG AH +A+T  G V  WG      SG+  GD +T    T +
Sbjct: 187 STPIVVDLPAGTTVTAVAAGNAHSLALTSAGTVLAWGANS---SGQ-LGDGTTTPRSTPV 242

Query: 144 DKDVFERQSSFLTEQVSPRSQVSRSSGGTSS--GTDGRGSGEEGSKRRRISLAKQTAESS 201
             D+    +       S    ++ +S GT    G +  G   +G+   R           
Sbjct: 243 AVDLPAGTTISTIAASSSSHSLAVTSTGTMLAWGANFTGQLGDGTITNR----------- 291

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
                   + P  V L  G  +  VA G  H+LA++  G +  WG  G GQLG GS    
Sbjct: 292 --------STPVAVDLPAGTTVTAVATGSGHSLAVTSTGTMLAWGGNGSGQLGDGS---T 340

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
            SS  P+         D  A                 G  V  +A G  HS  +T  G +
Sbjct: 341 TSSSTPVAV-------DLPA-----------------GTTVTAVAGGAGHSLALTSTGTM 376

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI 367
           L +G+   GQ G G+T +  +P          I  +A G +H++ +
Sbjct: 377 LAWGFNTSGQLGDGTTSNRSTPIATDLPADTTITAIAGGSFHSLAV 422


>gi|328872806|gb|EGG21173.1| regulator of chromosome condensation domain-containing protein
           [Dictyostelium fasciculatum]
          Length = 900

 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 105/424 (24%), Positives = 185/424 (43%), Gaps = 87/424 (20%)

Query: 100 IVKAAAGWAHCVAVTEGGEVYTWGWKECV---------PSGRVFGDLSTGTGLDKDVFER 150
           I + A G  H +A+T+ G++Y WG    +         PSG +      G G    + E+
Sbjct: 88  ITRVACGNFHSLALTDTGKIYEWGQLHEIDKSAKGLEAPSGLI---EMKGIGFASRIAEQ 144

Query: 151 Q-SSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDEN-- 207
             S +L+   +     S++    +S +      E+ + +      +  A + S GD++  
Sbjct: 145 SLSQYLSGDKAAYDPTSKNISNVNSQSAQNEDAEDLTNKDE----EFDAAAGSGGDDSQN 200

Query: 208 -------------LSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG 254
                        +   P LV      ++  ++AG  ++ A++  G+V+ WG+  +GQLG
Sbjct: 201 EQKGKHIGKIVDRVQLTPLLVGSIKNQQVVDMSAGWAYSAAVTKSGKVFTWGFNEKGQLG 260

Query: 255 LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAV 314
           LG R       H +P                     +   F     ++  ++CG +H  V
Sbjct: 261 LGDRWF-----HGLP---------------------QQVKF-FTNVHIVSVSCGRQHIGV 293

Query: 315 ITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSL-----LGIQIEGVAAGLWHTICISS 369
           I+D G L T+G G++GQ G G     L P  V +      L  ++  VA G   T+ ++ 
Sbjct: 294 ISDQGDLFTWGLGVFGQLGHGKLKSCLHPKKVLAFSEADQLNQKVRQVACGANFTMALTV 353

Query: 370 DGDVYAFGGNQFGQLG-TGGDQAE-------------------TLPRLLDAPSLENVHSK 409
           DG +++FG  ++GQLG T  +Q                      +P+ ++A  L +V  K
Sbjct: 354 DGRLWSFGHGEYGQLGATEENQYRDWNRGGNGNGNEREAHLQYAVPQQVEA--LASVKVK 411

Query: 410 SVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWH 468
            V+CG  HT V+ +D  V+ WGW   G LG GD   + +P +V  + G +  +++ G  H
Sbjct: 412 QVTCGHLHTIVVTEDNDVYSWGWGASGCLGFGDRKFQLVPQRVPALSGEIVSSISAGEKH 471

Query: 469 TLLL 472
           +L++
Sbjct: 472 SLVV 475



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 80/292 (27%), Positives = 120/292 (41%), Gaps = 38/292 (13%)

Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQ---------------- 252
           +A P ++T     RI  VA G  H+LAL+D G+++ WG   E                  
Sbjct: 74  TAHPNVITALAHERITRVACGNFHSLALTDTGKIYEWGQLHEIDKSAKGLEAPSGLIEMK 133

Query: 253 -LGLGSRIRMVSSPHPIPCIESSY---GKDRSAALSRGSVNSEGPGFRVPGNYVKGIACG 308
            +G  SRI   S    +   +++Y    K+ S   S+ + N +              A  
Sbjct: 134 GIGFASRIAEQSLSQYLSGDKAAYDPTSKNISNVNSQSAQNEDAEDLTNKDEEFDAAAGS 193

Query: 309 GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICIS 368
           G   +     G             G+     +L+P  V S+   Q+  ++AG  ++  ++
Sbjct: 194 GGDDSQNEQKGK----------HIGKIVDRVQLTPLLVGSIKNQQVVDMSAGWAYSAAVT 243

Query: 369 SDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVF 428
             G V+ +G N+ GQLG G      LP+        NVH  SVSCG +H  VI+D G +F
Sbjct: 244 KSGKVFTWGFNEKGQLGLGDRWFHGLPQ--QVKFFTNVHIVSVSCGRQHIGVISDQGDLF 301

Query: 429 CWGWNKYGQLGLGDVIDRNIPSQVTIEGCVP------RNVACGWWHTLLLAV 474
            WG   +GQLG G +     P +V             R VACG   T+ L V
Sbjct: 302 TWGLGVFGQLGHGKLKSCLHPKKVLAFSEADQLNQKVRQVACGANFTMALTV 353



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 98/398 (24%), Positives = 157/398 (39%), Gaps = 73/398 (18%)

Query: 100 IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGT----GLDKDVFERQSSFL 155
           +V  +AGWA+  AVT+ G+V+TWG+ E        G L  G     GL + V    +  +
Sbjct: 229 VVDMSAGWAYSAAVTKSGKVFTWGFNEK-------GQLGLGDRWFHGLPQQVKFFTNVHI 281

Query: 156 TEQVSPRSQVSRSSGGTSSGTDGRGS-GEEGSKRRRISLAKQTAESSSSGDENLSAFPCL 214
                 R  +   S      T G G  G+ G  + +  L  +   + S  D+        
Sbjct: 282 VSVSCGRQHIGVISDQGDLFTWGLGVFGQLGHGKLKSCLHPKKVLAFSEADQ-------- 333

Query: 215 VTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESS 274
             LN  VR   VA G   T+AL+  G++W +G+G  GQLG                 E+ 
Sbjct: 334 --LNQKVR--QVACGANFTMALTVDGRLWSFGHGEYGQLGATE--------------ENQ 375

Query: 275 YGKDRSAALSRGSVNSEGPGFRVPGNY-------VKGIACGGRHSAVITDAGALLTFGWG 327
           Y          G+       + VP          VK + CG  H+ V+T+   + ++GWG
Sbjct: 376 YRDWNRGGNGNGNEREAHLQYAVPQQVEALASVKVKQVTCGHLHTIVVTEDNDVYSWGWG 435

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI-SSDGDVYAFGGNQFGQLGT 386
             G  G G    +L P  V +L G  +  ++AG  H++ + S+D   +AF    +  L  
Sbjct: 436 ASGCLGFGDRKFQLVPQRVPALSGEIVSSISAGEKHSLVVRSTDTTTFAFD---YRNLLN 492

Query: 387 GGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR 446
               ++ +  + D     N       C   ++ ++ D          +YG   L D+  +
Sbjct: 493 DKKHSDIVFLVQDKKVYANKFIIKSRCPRLYSTILLD---------KRYGM--LQDLSGQ 541

Query: 447 NIP-SQVTIEGCVPRNVACGWWHTLL-------LAVPP 476
           + P  Q+TI      NV    W + L       L +PP
Sbjct: 542 DKPMRQITIA-----NVKYQVWTSFLTYLYTDHLVIPP 574



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 119/296 (40%), Gaps = 69/296 (23%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P ++    G+RI   A G  H+LA+++ G V+ +G G EGQLG   +    ++ H  P +
Sbjct: 25  PSVIQNLSGMRIVMSACGEAHSLAVTEFGDVYSFGRGREGQLGHPEK---YNTAH--PNV 79

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
            ++   +R                      +  +ACG  HS  +TD G +  + WG   +
Sbjct: 80  ITALAHER----------------------ITRVACGNFHSLALTDTGKI--YEWGQLHE 115

Query: 332 CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQL------- 384
             + +   E +P+ +  + GI      A    +  +S D   Y         +       
Sbjct: 116 IDKSAKGLE-APSGLIEMKGIGFASRIAEQSLSQYLSGDKAAYDPTSKNISNVNSQSAQN 174

Query: 385 -----------------GTGGDQAET----------LPRLLDAP----SLENVHSKSVSC 413
                            G+GGD ++           + R+   P    S++N     +S 
Sbjct: 175 EDAEDLTNKDEEFDAAAGSGGDDSQNEQKGKHIGKIVDRVQLTPLLVGSIKNQQVVDMSA 234

Query: 414 GARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVP-RNVACGWWH 468
           G  ++A +   GKVF WG+N+ GQLGLGD     +P QV     V   +V+CG  H
Sbjct: 235 GWAYSAAVTKSGKVFTWGFNEKGQLGLGDRWFHGLPQQVKFFTNVHIVSVSCGRQH 290



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 59/112 (52%), Gaps = 2/112 (1%)

Query: 320 ALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN 379
           ++++FG     Q G     D L P+ + +L G++I   A G  H++ ++  GDVY+FG  
Sbjct: 2   SVISFGVNKQSQLGHALEKDHLDPSVIQNLSGMRIVMSACGEAHSLAVTEFGDVYSFGRG 61

Query: 380 QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWG 431
           + GQLG         P ++ A + E +    V+CG  H+  + D GK++ WG
Sbjct: 62  REGQLGHPEKYNTAHPNVITALAHERI--TRVACGNFHSLALTDTGKIYEWG 111



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 97/255 (38%), Gaps = 37/255 (14%)

Query: 39  PLTVGSAWRDVC---GGGCGFAMAISDSRKLITWGSTDD----LGQSYVTSGKHGEIPEP 91
           PL VGS           G  ++ A++ S K+ TWG  +     LG  +     HG +P+ 
Sbjct: 218 PLLVGSIKNQQVVDMSAGWAYSAAVTKSGKVFTWGFNEKGQLGLGDRWF----HG-LPQQ 272

Query: 92  FPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQ 151
               T   IV  + G  H   +++ G+++TWG         VFG L  G G  K     +
Sbjct: 273 VKFFTNVHIVSVSCGRQHIGVISDQGDLFTWGLG-------VFGQL--GHGKLKSCLHPK 323

Query: 152 SSFLTEQVSPRSQVSRSSGGTSSGT-----DGR----GSGEEGS------KRRRISLAKQ 196
                 +    +Q  R     ++ T     DGR    G GE G        + R      
Sbjct: 324 KVLAFSEADQLNQKVRQVACGANFTMALTVDGRLWSFGHGEYGQLGATEENQYRDWNRGG 383

Query: 197 TAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLG 256
               +        A P  V     V++  V  G  HT+ +++   V+ WG+G  G LG G
Sbjct: 384 NGNGNEREAHLQYAVPQQVEALASVKVKQVTCGHLHTIVVTEDNDVYSWGWGASGCLGFG 443

Query: 257 SRIRMVSSPHPIPCI 271
            R +    P  +P +
Sbjct: 444 DR-KFQLVPQRVPAL 457



 Score = 39.7 bits (91), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 3/101 (2%)

Query: 373 VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGW 432
           V +FG N+  QLG   ++    P ++   +L  +     +CG  H+  + + G V+ +G 
Sbjct: 3   VISFGVNKQSQLGHALEKDHLDPSVIQ--NLSGMRIVMSACGEAHSLAVTEFGDVYSFGR 60

Query: 433 NKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
            + GQLG  +  +   P+ +T +       VACG +H+L L
Sbjct: 61  GREGQLGHPEKYNTAHPNVITALAHERITRVACGNFHSLAL 101


>gi|168024283|ref|XP_001764666.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162684244|gb|EDQ70648.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 401

 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 127/271 (46%), Gaps = 47/271 (17%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR-MVSSPHPIPCIESSYGKDR 279
            +   +AAG  H+ A+S+ G+V+ WG   +GQLGLG R +  V +   +  ++       
Sbjct: 96  AKFTHIAAGDFHSAAISEDGRVYMWGRNTQGQLGLGKRGKGKVCAAQWVESLKD------ 149

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGS--- 336
                          FR+     + +A G  HS  +++ G +L++G  L G+ G G    
Sbjct: 150 ---------------FRI-----QALALGAEHSLALSEEGEVLSWGTSLNGRLGHGEGHR 189

Query: 337 ---------TDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG 387
                       E +P  V     +++  VAAGL H+ C+   G ++ FG  +  QLG G
Sbjct: 190 SSSMFSIFRKSSEYTPRLVKGFRDVKVSKVAAGLTHSACLDEQGSLFTFGKGRECQLGLG 249

Query: 388 GDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
           GD+  + P+ +  P +  V  + ++CG  HT  I+ +G+++ WG N+YG LG G      
Sbjct: 250 GDRDISEPKRV--PVIPPV--EEIACGGYHTGAISRNGQLYMWGSNEYGCLGFGYKHQNA 305

Query: 448 IPSQVTIEGCVPR----NVACGWWHTLLLAV 474
               + +EG +       V CGW HT+ L V
Sbjct: 306 TSLPMLVEGALESLRVTQVQCGWKHTMALTV 336



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 89/263 (33%), Positives = 127/263 (48%), Gaps = 32/263 (12%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            RI  +A G  H+LALS+ G+V  WG    G+LG G   R  SS   I    S Y    +
Sbjct: 150 FRIQALALGAEHSLALSEEGEVLSWGTSLNGRLGHGEGHR-SSSMFSIFRKSSEY----T 204

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
             L +G  + +          V  +A G  HSA + + G+L TFG G   Q G G   D 
Sbjct: 205 PRLVKGFRDVK----------VSKVAAGLTHSACLDEQGSLFTFGKGRECQLGLGGDRDI 254

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG--GDQAETLPRLL 398
             P  V  +    +E +A G +HT  IS +G +Y +G N++G LG G     A +LP L+
Sbjct: 255 SEPKRVPVI--PPVEEIACGGYHTGAISRNGQLYMWGSNEYGCLGFGYKHQNATSLPMLV 312

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGW------------NKYGQLGLGDVIDR 446
           +  +LE++    V CG +HT  +  DG VF WGW            +  GQLGLG+  D 
Sbjct: 313 EG-ALESLRVTQVQCGWKHTMALTVDGDVFAWGWGGSQGTHGVDGLSSGGQLGLGNENDF 371

Query: 447 NIPSQVTIEGCVPRNVACGWWHT 469
             P+QV  +      ++CG+ H+
Sbjct: 372 LEPTQVKSKNMKAIQISCGFNHS 394



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/118 (34%), Positives = 62/118 (52%)

Query: 324 FGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQ 383
           +G G YG+ GQ S +    P    S+  +Q   +A G  HT+ ++ +G VYA G N +GQ
Sbjct: 14  WGNGDYGRLGQASGESFWEPTVCKSMQHLQPIALACGGAHTLVLTEEGRVYASGLNDWGQ 73

Query: 384 LGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
           LG       ++  L      +      ++ G  H+A I++DG+V+ WG N  GQLGLG
Sbjct: 74  LGLPLSTGHSMEFLEVEGLPDEAKFTHIAAGDFHSAAISEDGRVYMWGRNTQGQLGLG 131


>gi|108761023|ref|YP_629150.1| RCC1 repeat-containing protein [Myxococcus xanthus DK 1622]
 gi|108464903|gb|ABF90088.1| RCC1 repeat domain protein [Myxococcus xanthus DK 1622]
          Length = 1466

 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 89/286 (31%), Positives = 130/286 (45%), Gaps = 42/286 (14%)

Query: 204  GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
            G  +  + P  VT   G+R   ++AG  H +ALS  G VW WG    GQLG GS      
Sbjct: 994  GTNHARSVPNQVTSLKGIR--AMSAGAHHVVALSADGTVWTWGDNTLGQLGDGSSSPTGM 1051

Query: 264  SPHPIPCIE---------------------SSYGKDRSAALSRG---------SVNSEGP 293
             P  +P +                       ++G +    L  G         +V  EGP
Sbjct: 1052 WPRQVPELRGVEAVAAGEQFTVAVLLDGTARAWGSNEYGQLGDGKTGPQLTPMAVKIEGP 1111

Query: 294  GFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ 353
              R P   V+ +   G+H+ V    G + T+G   +GQ G G+T     P  V  L    
Sbjct: 1112 KIRPP---VRTVRAWGQHAVVQMSDGTVQTWGDNTFGQLGDGTTTRRAVPLTVYGL--AS 1166

Query: 354  IEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSC 413
            +  V++G WH++ + SDG V+A+G N FGQLG G     T P  +    L +V   ++  
Sbjct: 1167 VVAVSSGAWHSLALLSDGTVWAWGANGFGQLGDGTSTPRTRP--VQVAGLGDV--VAIGS 1222

Query: 414  GARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCV 458
            G  H   +  DG V+ WG+N +GQLG G    R++P++V  +EG V
Sbjct: 1223 GGYHALAVCSDGSVWTWGYNAFGQLGDGTAESRSLPTRVEGLEGVV 1268



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 127/458 (27%), Positives = 184/458 (40%), Gaps = 87/458 (18%)

Query: 21  PGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYV 80
           PG  P++ P L+ +V                 G  F +A+ +   +  WGS    G   +
Sbjct: 198 PGLTPEQVPGLNGVVA-------------LAAGFDFTLAVLEDGTVRAWGSN---GSGQL 241

Query: 81  TSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTG 140
             G   +   P  +   + I +  AG  H +A+ + G V+TWG           G L  G
Sbjct: 242 GDGTSTQRLSPVKVSELSGITEVRAGTYHALALGKDGGVWTWG-------SNASGQLGDG 294

Query: 141 TGLDKDVFERQSSFLTEQVSPRSQVSRSS-----GGTSSGTDGRGSGEEGSKRRRISLAK 195
           T  D+ V  +      E+V   + +   S      G        GSG+ G          
Sbjct: 295 TWNDRAVPMQVPGL--ERVKAVASMDSDSLALLDTGAVFAWGANGSGQLGD--------- 343

Query: 196 QTAESSSSGDENLSAFPCLVTLNPGVR-IATVAAGGRHTLALSDIGQVWGWGYGGEGQLG 254
                   GD    A P  V   PG+  +A+V  G +H L L   G +W WG G  GQLG
Sbjct: 344 --------GDTTDRATPGPV---PGLNAVASVVGGAQHALVLRKDGTLWAWGGGLSGQLG 392

Query: 255 LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAV 314
            G   R     H +P                       P  R+ G  V  +A G  HS  
Sbjct: 393 HGGSER-----HVVPA----------------------PVMRLAG--VTSMATGSFHSLA 423

Query: 315 ITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVY 374
               G++  +G   YGQ G GST +  +   V  L G++   VA+   H++ +  DG V+
Sbjct: 424 ALGDGSVWAWGRNTYGQLGDGSTAERHAAVRVEGLGGVR--SVASAAHHSLAVGMDGTVW 481

Query: 375 AFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNK 434
           A+G N  GQLG G       P  +  P L +V   +V+ G  H   +  DG V+ WG+N 
Sbjct: 482 AWGRNAAGQLGDGTTLDRARP--VAVPGLTSV--TAVAAGGSHVLALRSDGSVWAWGYNA 537

Query: 435 YGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
            GQLG G  +DR  P +V+  G V   VA G + ++ L
Sbjct: 538 LGQLGDGTTVDRLTPVRVSGLGAVV-AVAAGSYFSMAL 574



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 132/449 (29%), Positives = 187/449 (41%), Gaps = 70/449 (15%)

Query: 53  GCGFAMAISDSRKLITWG--STDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
           G   ++A+     + TWG  S+  LG    T     +   P  +    S+V  AAG  H 
Sbjct: 117 GDAHSLALGADGSVWTWGGNSSGQLGDGTTT-----DRATPMRVAGLDSVVAVAAGDFHS 171

Query: 111 VAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSG 170
           +A+ E G V+ WG       GR      T  GL  +     +  +         ++    
Sbjct: 172 LALREDGTVWAWGTNFHGQLGRGH----TQPGLTPEQVPGLNGVVALAAGFDFTLAVLED 227

Query: 171 GT--SSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAA 228
           GT  + G++G G   +G+  +R+S  K +  S                      I  V A
Sbjct: 228 GTVRAWGSNGSGQLGDGTSTQRLSPVKVSELSG---------------------ITEVRA 266

Query: 229 GGRHTLALSDIGQVWGWGYGGEGQLGLGS-RIRMVSSPHPIPCIE-----SSYGKDRSAA 282
           G  H LAL   G VW WG    GQLG G+   R V  P  +P +E     +S   D  A 
Sbjct: 267 GTYHALALGKDGGVWTWGSNASGQLGDGTWNDRAV--PMQVPGLERVKAVASMDSDSLAL 324

Query: 283 LSRGSVNSEG-----------------PGFRVPG-NYVKGIACGGRHSAVITDAGALLTF 324
           L  G+V + G                 PG  VPG N V  +  G +H+ V+   G L  +
Sbjct: 325 LDTGAVFAWGANGSGQLGDGDTTDRATPG-PVPGLNAVASVVGGAQHALVLRKDGTLWAW 383

Query: 325 GWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQL 384
           G GL GQ G G ++  + P  V  L G  +  +A G +H++    DG V+A+G N +GQL
Sbjct: 384 GGGLSGQLGHGGSERHVVPAPVMRLAG--VTSMATGSFHSLAALGDGSVWAWGRNTYGQL 441

Query: 385 GTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVI 444
           G G          ++   L  V  +SV+  A H+  +  DG V+ WG N  GQLG G  +
Sbjct: 442 GDGSTAERHAAVRVEG--LGGV--RSVASAAHHSLAVGMDGTVWAWGRNAAGQLGDGTTL 497

Query: 445 DRNIPSQVTIEGCVPRN-VACGWWHTLLL 472
           DR  P  V + G      VA G  H L L
Sbjct: 498 DRARP--VAVPGLTSVTAVAAGGSHVLAL 524



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 122/405 (30%), Positives = 168/405 (41%), Gaps = 55/405 (13%)

Query: 91  PFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFER 150
           P P+   A +   A G  H +A    G V+ WG          +G L      D    ER
Sbjct: 402 PAPVMRLAGVTSMATGSFHSLAALGDGSVWAWGRN-------TYGQLG-----DGSTAER 449

Query: 151 QSSFLTEQVS-PRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLS 209
            ++   E +   RS  S +    + G DG             +  +  A     G     
Sbjct: 450 HAAVRVEGLGGVRSVASAAHHSLAVGMDGT----------VWAWGRNAAGQLGDGTTLDR 499

Query: 210 AFPCLVTLNPGV-RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS---RIRMVSSP 265
           A P  V   PG+  +  VAAGG H LAL   G VW WGY   GQLG G+   R+  V   
Sbjct: 500 ARPVAV---PGLTSVTAVAAGGSHVLALRSDGSVWAWGYNALGQLGDGTTVDRLTPVRVS 556

Query: 266 HPIPCIESSYGKDRSAAL-SRGSVNSEGPGF----------------RVPG-NYVKGIAC 307
                +  + G   S AL S G+V + G GF                RV G   +  +A 
Sbjct: 557 GLGAVVAVAAGSYFSMALQSDGTVWTWGEGFEGQLGDGGGVQRLSPVRVEGLANITRVAA 616

Query: 308 GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI 367
           G  H+  +   G +  +G    GQ G GS  D   P  V  L G  I  V+ G  H++ +
Sbjct: 617 GSAHALAVRGDGTVWAWGDNGEGQLGDGSWADRFRPVQVPGLQG--ITAVSGGRSHSMAL 674

Query: 368 SSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKV 427
             DG V A+G N +GQLG G   +   P L+  P L  + +   S    H   +  DG +
Sbjct: 675 QGDGTVRAWGYNGYGQLGDGTLTSRVRPALI--PGLTGIQALHPSH--LHVLALHADGTL 730

Query: 428 FCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
             WG+N++GQLGLG      +P QV   G V R ++ G  HTL++
Sbjct: 731 RGWGYNRFGQLGLGAAGWSAVPVQVRGIGRVDR-LSVGRAHTLMV 774



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 137/488 (28%), Positives = 199/488 (40%), Gaps = 84/488 (17%)

Query: 28   SPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGE 87
            +P L+P+ V+    V S        G  F++A+ D      WG T+  GQ  +  G +  
Sbjct: 947  APSLTPVRVKGLERVAS-----VAAGRAFSVAVRDDGTAWAWG-TNPSGQ--LGDGTNHA 998

Query: 88   IPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDV 147
               P  + +   I   +AG  H VA++  G V+TWG           G L  G+     +
Sbjct: 999  RSVPNQVTSLKGIRAMSAGAHHVVALSADGTVWTWG-------DNTLGQLGDGSSSPTGM 1051

Query: 148  FERQSSFL--TEQVSPRSQ---------VSRSSGGTSSGTDGRGSGE----------EGS 186
            + RQ   L   E V+   Q          +R+ G    G  G G             EG 
Sbjct: 1052 WPRQVPELRGVEAVAAGEQFTVAVLLDGTARAWGSNEYGQLGDGKTGPQLTPMAVKIEGP 1111

Query: 187  KRR-------------RISLAKQTAES------SSSGDENLSAFPCLVTLNPGVRIATVA 227
            K R              + ++  T ++         GD   +     +T+     +  V+
Sbjct: 1112 KIRPPVRTVRAWGQHAVVQMSDGTVQTWGDNTFGQLGDGTTTRRAVPLTVYGLASVVAVS 1171

Query: 228  AGGRHTLALSDIGQVWGWGYGGEGQLGLGS---RIRMVSSP-------------HPIP-C 270
            +G  H+LAL   G VW WG  G GQLG G+   R R V                H +  C
Sbjct: 1172 SGAWHSLALLSDGTVWAWGANGFGQLGDGTSTPRTRPVQVAGLGDVVAIGSGGYHALAVC 1231

Query: 271  IESS---YGKDRSAALSRGSVNSEGPGFRVPG-NYVKGIACGGRHSAVITDAGALLTFGW 326
             + S   +G +    L  G+  S     RV G   V  +A G  +S  +   G L  +G 
Sbjct: 1232 SDGSVWTWGYNAFGQLGDGTAESRSLPTRVEGLEGVVAVAGGDHYSLALHSDGTLSAWGN 1291

Query: 327  GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
               GQ G G+     S   V+      +  V AG  HT+ +  DG V+ +G N FGQLG 
Sbjct: 1292 NASGQLGDGTGTTRYS--RVAVKGVDGVVDVRAGATHTVALRGDGTVWTWGDNAFGQLGD 1349

Query: 387  G--GDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVI 444
            G  G +   +PR +  P+L +V   +V  GARHT  +A  G V+ WG N +GQLGLGD  
Sbjct: 1350 GASGTRMRLVPRPV--PNLSSV--SAVGAGARHTFAVALKGTVWTWGRNSHGQLGLGDNT 1405

Query: 445  DRNIPSQV 452
            +R  P +V
Sbjct: 1406 NRTEPLRV 1413



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 122/454 (26%), Positives = 184/454 (40%), Gaps = 69/454 (15%)

Query: 82  SGKHGEIPEPFPLPTEASIVKA-----AAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGD 136
           SG   +   P    T+  +V A     AAG  H + ++ GG+V+ WG       G     
Sbjct: 37  SGALAKPETPHATRTQRVVVTAPPMRIAAGTQHSLYLSPGGDVWAWGGNGSGQLGGAETS 96

Query: 137 LSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSS----GGTSSGTDGRGSGEEGSKRRRIS 192
           L     +     E   S ++      +  +  S    GG SSG  G G+  + +   R++
Sbjct: 97  LQGLAPVRLAALENIVSVVSGDAHSLALGADGSVWTWGGNSSGQLGDGTTTDRATPMRVA 156

Query: 193 LAKQTAESSSSGDENLSAF-----------------------PCLVTLN-PGVR-IATVA 227
               +  + ++GD +  A                        P L     PG+  +  +A
Sbjct: 157 -GLDSVVAVAAGDFHSLALREDGTVWAWGTNFHGQLGRGHTQPGLTPEQVPGLNGVVALA 215

Query: 228 AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESS------------- 274
           AG   TLA+ + G V  WG  G GQLG G+  + +S   P+   E S             
Sbjct: 216 AGFDFTLAVLEDGTVRAWGSNGSGQLGDGTSTQRLS---PVKVSELSGITEVRAGTYHAL 272

Query: 275 ----------YGKDRSAALSRGSVNSEGPGFRVPG-NYVKGIACGGRHSAVITDAGALLT 323
                     +G + S  L  G+ N      +VPG   VK +A     S  + D GA+  
Sbjct: 273 ALGKDGGVWTWGSNASGQLGDGTWNDRAVPMQVPGLERVKAVASMDSDSLALLDTGAVFA 332

Query: 324 FGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQ 383
           +G    GQ G G T D  +P  V  L    +  V  G  H + +  DG ++A+GG   GQ
Sbjct: 333 WGANGSGQLGDGDTTDRATPGPVPGL--NAVASVVGGAQHALVLRKDGTLWAWGGGLSGQ 390

Query: 384 LGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDV 443
           LG GG +   +P    AP +      S++ G+ H+     DG V+ WG N YGQLG G  
Sbjct: 391 LGHGGSERHVVP----APVMRLAGVTSMATGSFHSLAALGDGSVWAWGRNTYGQLGDGST 446

Query: 444 IDRNIPSQVTIEGCVPRNVACGWWHTLLLAVPPT 477
            +R+   +V   G V R+VA    H+L + +  T
Sbjct: 447 AERHAAVRVEGLGGV-RSVASAAHHSLAVGMDGT 479



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 106/370 (28%), Positives = 151/370 (40%), Gaps = 65/370 (17%)

Query: 91   PFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFER 150
            P  +P    +   A+G  H +A+   G V+ WG           G L  GT        R
Sbjct: 802  PVSVPGVPCVRSVASGIQHSLALACDGTVWAWG-------ANARGQLGDGT-----TTPR 849

Query: 151  QSSFLTEQVSPRSQVSRSSGGTSS---GTDGRGSGEEGSKRRRISLAKQTAESSSSGDEN 207
             +  L E +  R  V+ ++GG +S     DG      G+   ++     T  +  +  E+
Sbjct: 850  VTPGLVEGL--RGVVALAAGGDASVALRADGSVWSWGGNASGQLGDGTLTDRALPAHVEH 907

Query: 208  LSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHP 267
            LS                VA G  H LA+ + G +W WG  G GQLG G      ++P  
Sbjct: 908  LS------------NAVAVAVGETHALAVGEDGALWAWGANGSGQLGDGG-----TAPSL 950

Query: 268  IPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWG 327
             P         R   L R                V  +A G   S  + D G    +G  
Sbjct: 951  TPV--------RVKGLER----------------VASVAAGRAFSVAVRDDGTAWAWGTN 986

Query: 328  LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG 387
              GQ G G+      PN V+SL GI+   ++AG  H + +S+DG V+ +G N  GQLG G
Sbjct: 987  PSGQLGDGTNHARSVPNQVTSLKGIRA--MSAGAHHVVALSADGTVWTWGDNTLGQLGDG 1044

Query: 388  GDQAETL-PRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR 446
                  + PR +  P L  V  ++V+ G + T  +  DG    WG N+YGQLG G    +
Sbjct: 1045 SSSPTGMWPRQV--PELRGV--EAVAAGEQFTVAVLLDGTARAWGSNEYGQLGDGKTGPQ 1100

Query: 447  NIPSQVTIEG 456
              P  V IEG
Sbjct: 1101 LTPMAVKIEG 1110



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 90/279 (32%), Positives = 127/279 (45%), Gaps = 32/279 (11%)

Query: 222  RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS---RIRMVSSPHPIPCIES-SYGK 277
            R+  ++ G  HTL +   G V  WG  G GQLG G+   R   VS P  +PC+ S + G 
Sbjct: 760  RVDRLSVGRAHTLMVRADGTVMAWGENGSGQLGDGTSTHRTGPVSVP-GVPCVRSVASGI 818

Query: 278  DRSAALS------------RGSVNSEGPGFRVPGNYVKGI------ACGGRHSAVITDAG 319
              S AL+            RG +       RV    V+G+      A GG  S  +   G
Sbjct: 819  QHSLALACDGTVWAWGANARGQLGDGTTTPRVTPGLVEGLRGVVALAAGGDASVALRADG 878

Query: 320  ALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN 379
            ++ ++G    GQ G G+  D   P  V  L       VA G  H + +  DG ++A+G N
Sbjct: 879  SVWSWGGNASGQLGDGTLTDRALPAHVEHL--SNAVAVAVGETHALAVGEDGALWAWGAN 936

Query: 380  QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG 439
              GQLG GG      P  +    LE V   SV+ G   +  + DDG  + WG N  GQLG
Sbjct: 937  GSGQLGDGGTAPSLTP--VRVKGLERV--ASVAAGRAFSVAVRDDGTAWAWGTNPSGQLG 992

Query: 440  LGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLAVPPT 477
             G    R++P+QVT ++G   R ++ G  H + L+   T
Sbjct: 993  DGTNHARSVPNQVTSLKGI--RAMSAGAHHVVALSADGT 1029



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 80/258 (31%), Positives = 112/258 (43%), Gaps = 35/258 (13%)

Query: 223  IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIE---------- 272
            +  + +GG H LA+   G VW WGY   GQLG G+     S P  +  +E          
Sbjct: 1217 VVAIGSGGYHALAVCSDGSVWTWGYNAFGQLGDGT-AESRSLPTRVEGLEGVVAVAGGDH 1275

Query: 273  -----------SSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIA---CGGRHSAVITDA 318
                       S++G + S  L  G+  +     RV    V G+     G  H+  +   
Sbjct: 1276 YSLALHSDGTLSAWGNNASGQLGDGTGTTRYS--RVAVKGVDGVVDVRAGATHTVALRGD 1333

Query: 319  GALLTFGWGLYGQCGQGS--TDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAF 376
            G + T+G   +GQ G G+  T   L P  V +L    +  V AG  HT  ++  G V+ +
Sbjct: 1334 GTVWTWGDNAFGQLGDGASGTRMRLVPRPVPNL--SSVSAVGAGARHTFAVALKGTVWTW 1391

Query: 377  GGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYG 436
            G N  GQLG G +   T P  L    L +V    VS GA  +  +  DG V  WG + YG
Sbjct: 1392 GRNSHGQLGLGDNTNRTEP--LRVRELSDV--TVVSGGADFSLAMKRDGTVLSWGSSLYG 1447

Query: 437  QLGLGDVIDRNIPSQVTI 454
             LGLG    R+ P QV +
Sbjct: 1448 SLGLGATGHRSSPGQVAL 1465



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 89/371 (23%), Positives = 137/371 (36%), Gaps = 68/371 (18%)

Query: 38   LPLTV-GSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPT 96
            +PLTV G A       G   ++A+     +  WG+ +  GQ  +  G       P  +  
Sbjct: 1157 VPLTVYGLASVVAVSSGAWHSLALLSDGTVWAWGA-NGFGQ--LGDGTSTPRTRPVQVAG 1213

Query: 97   EASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSF-- 154
               +V   +G  H +AV   G V+TWG+         FG L  GT   + +  R      
Sbjct: 1214 LGDVVAIGSGGYHALAVCSDGSVWTWGYN-------AFGQLGDGTAESRSLPTRVEGLEG 1266

Query: 155  -LTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPC 213
             +         ++  S GT S      SG+ G                   D   +    
Sbjct: 1267 VVAVAGGDHYSLALHSDGTLSAWGNNASGQLG-------------------DGTGTTRYS 1307

Query: 214  LVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG---LGSRIRMVSSPHPIPC 270
             V +     +  V AG  HT+AL   G VW WG    GQLG    G+R+R+V  P P+P 
Sbjct: 1308 RVAVKGVDGVVDVRAGATHTVALRGDGTVWTWGDNAFGQLGDGASGTRMRLV--PRPVPN 1365

Query: 271  IESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
            + S                            V  +  G RH+  +   G + T+G   +G
Sbjct: 1366 LSS----------------------------VSAVGAGARHTFAVALKGTVWTWGRNSHG 1397

Query: 331  QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            Q G G   +   P  V  L  + +  V+ G   ++ +  DG V ++G + +G LG G   
Sbjct: 1398 QLGLGDNTNRTEPLRVRELSDVTV--VSGGADFSLAMKRDGTVLSWGSSLYGSLGLGATG 1455

Query: 391  AETLPRLLDAP 401
              + P  +  P
Sbjct: 1456 HRSSPGQVALP 1466


>gi|91201899|emb|CAJ74959.1| similar to chromosomal condensation regulatory protein [Candidatus
           Kuenenia stuttgartiensis]
          Length = 620

 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 126/275 (45%), Gaps = 42/275 (15%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
           G  +    P  V +N    I  V  GG H++AL  +G+VW WGY G+G+LG G+      
Sbjct: 190 GTNDSQTTPVAVQINALTTITAVDCGGDHSMALDSLGRVWAWGYNGDGELGGGT------ 243

Query: 264 SPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLT 323
                    +         L+                 +  I+ GG +S  ++  G++LT
Sbjct: 244 ----TENNSNVPVPVPVPNLTD----------------IIAISAGGEYSIALSSDGSVLT 283

Query: 324 FGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQ 383
           +G    GQ G G+TD    P  +SSL    ++G++AG  H++ ++ DG VYA+G N  GQ
Sbjct: 284 WGANSDGQLGNGNTDQNSVPTKISSL--PLMKGISAGEAHSLAVTEDGFVYAWGLNDEGQ 341

Query: 384 LGTGGDQAETLPRLLDAPSLENVHSK------SVSCGARHTAVIADDGKVFCWGWNKYGQ 437
           +G G   A       D P L  V  +      +V  GA  +  +  DG+V+ WG N  GQ
Sbjct: 342 IGNGEKSA-------DNPVLNPVQVQGLTDIDAVCAGATFSLALGIDGRVWAWGLNDEGQ 394

Query: 438 LGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           LG G   +   P +VT    +   VACG  H+L +
Sbjct: 395 LGDGTNTNSTTPVEVTNLAKI-SAVACGSDHSLAI 428



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 56/177 (31%), Positives = 81/177 (45%), Gaps = 32/177 (18%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V AG   +LAL   G+VW WG   EGQLG G+     +     P   ++  K     
Sbjct: 365 IDAVCAGATFSLALGIDGRVWAWGLNDEGQLGDGTNTNSTT-----PVEVTNLAK----- 414

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                              +  +ACG  HS  I + G + ++G    GQ G GST    +
Sbjct: 415 -------------------ISAVACGSDHSLAIRN-GKVKSWGLNDEGQLGDGSTRSSSA 454

Query: 343 PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLD 399
           P  V+ L  I    VAAG  H++ I+S G++Y +G N  GQLG G +++   P+ +D
Sbjct: 455 PLDVTGLSDIVY--VAAGESHSLAITSKGNIYVWGLNGDGQLGDGTNRSSRTPKTID 509



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 81/176 (46%), Gaps = 2/176 (1%)

Query: 297 VPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG 356
            PG     I+ G  HS  +   G L  +G    GQ G G+ D + +P  V       I  
Sbjct: 152 TPGVVTPQISGGWSHSLALDSEGKLWAWGLNEDGQLGDGTNDSQTTPVAVQINALTTITA 211

Query: 357 VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR 416
           V  G  H++ + S G V+A+G N  G+LG GG         +  P        ++S G  
Sbjct: 212 VDCGGDHSMALDSLGRVWAWGYNGDGELG-GGTTENNSNVPVPVPVPNLTDIIAISAGGE 270

Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           ++  ++ DG V  WG N  GQLG G+    ++P++++    + + ++ G  H+L +
Sbjct: 271 YSIALSSDGSVLTWGANSDGQLGNGNTDQNSVPTKISSLPLM-KGISAGEAHSLAV 325


>gi|301094633|ref|XP_002896421.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262109510|gb|EEY67562.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 1289

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 139/287 (48%), Gaps = 37/287 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI------PCIESSYG 276
           IA VA G +H+LA++D G+++ WG G +G+LG G  +R  + P  +        + +S G
Sbjct: 555 IAMVACGAQHSLAITDAGELYTWGSGEDGRLGHGD-MRDRAVPRKVMSLLRESVVSASCG 613

Query: 277 KDRSAALS-RGSVNSEGPGFR------------VP--------GNYVKGIACGGRHSAVI 315
              +A L+ +GSV + G G               P        G  +  + CG   +A +
Sbjct: 614 GAHTAVLTAKGSVFTFGRGRNGRLGLGDNKWRDTPHPIVGFPQGTSISLVVCGWNFTAAL 673

Query: 316 TDAGALLTFGWGLYGQCGQGSTD-DELSPNCVSSLLGI---QIEGVAAGLWHTICISSDG 371
              G++ T+G    GQCG G  D D++ P CV  L  +    +  VA G  HT+ +++ G
Sbjct: 674 DRQGSVFTWGKTGEGQCGLGYVDRDQVVPRCVDKLRDVAGSSVVDVACGYTHTVVLTASG 733

Query: 372 DVYAFGGNQFGQLGTGGDQAETLPRLLDAPS---LENVHSKSVSCGARHTAVIADDGKVF 428
           ++Y++G  ++GQLGTG D  + LP  +  P+           V CGA H+    +   +F
Sbjct: 734 ELYSWGLGEYGQLGTG-DVYQPLPARVQLPADALCAPDQLARVYCGAFHSIATTEQRVMF 792

Query: 429 CWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLAV 474
            WG N YG  GLG   +++ P ++          VACG  +T+ L V
Sbjct: 793 AWGLNSYGACGLGHTANKDKPERIDCFSSQTELVVACGHKYTIALEV 839



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 82/267 (30%), Positives = 125/267 (46%), Gaps = 11/267 (4%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P  V+L  G  I  VA GG H L L+  G V+ +G   + ++   + + + +    +P  
Sbjct: 468 PKHVSLANGQPIVQVACGGEHLLYLTSTGDVYSYGDNEDKKV---AAVTVATHTSTLPDN 524

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
           ES+     S+ L+   V        +    +  +ACG +HS  ITDAG L T+G G  G+
Sbjct: 525 ESTRVVSTSSFLAPHLVEELALEKALHRTTIAMVACGAQHSLAITDAGELYTWGSGEDGR 584

Query: 332 CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
            G G   D   P  V SLL   +   + G  HT  +++ G V+ FG  + G+LG G ++ 
Sbjct: 585 LGHGDMRDRAVPRKVMSLLRESVVSASCGGAHTAVLTAKGSVFTFGRGRNGRLGLGDNKW 644

Query: 392 ETLPR-LLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG-----DVID 445
              P  ++  P   ++    V CG   TA +   G VF WG    GQ GLG      V+ 
Sbjct: 645 RDTPHPIVGFPQGTSI--SLVVCGWNFTAALDRQGSVFTWGKTGEGQCGLGYVDRDQVVP 702

Query: 446 RNIPSQVTIEGCVPRNVACGWWHTLLL 472
           R +     + G    +VACG+ HT++L
Sbjct: 703 RCVDKLRDVAGSSVVDVACGYTHTVVL 729



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 96/338 (28%), Positives = 138/338 (40%), Gaps = 55/338 (16%)

Query: 99  SIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQ 158
           +I   A G  H +A+T+ GE+YTWG  E        G L  G   D+ V  +  S L E 
Sbjct: 554 TIAMVACGAQHSLAITDAGELYTWGSGED-------GRLGHGDMRDRAVPRKVMSLLRES 606

Query: 159 VSPRSQVSRSSGGTSSGT-DGRGSGEEGSKRR--RISLAKQTAESSSSGDENLSAFPC-L 214
           V     VS S GG  +     +GS     + R  R+ L          GD      P  +
Sbjct: 607 V-----VSASCGGAHTAVLTAKGSVFTFGRGRNGRLGL----------GDNKWRDTPHPI 651

Query: 215 VTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESS 274
           V    G  I+ V  G   T AL   G V+ WG  GEGQ GLG   R    P    C++  
Sbjct: 652 VGFPQGTSISLVVCGWNFTAALDRQGSVFTWGKTGEGQCGLGYVDRDQVVPR---CVD-- 706

Query: 275 YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
             K R  A                G+ V  +ACG  H+ V+T +G L ++G G YGQ G 
Sbjct: 707 --KLRDVA----------------GSSVVDVACGYTHTVVLTASGELYSWGLGEYGQLGT 748

Query: 335 GSTDDELSPNCVSSLLGI----QIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
           G     L          +    Q+  V  G +H+I  +    ++A+G N +G  G G   
Sbjct: 749 GDVYQPLPARVQLPADALCAPDQLARVYCGAFHSIATTEQRVMFAWGLNSYGACGLGHTA 808

Query: 391 AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVF 428
            +  P  +D  S +      V+CG ++T  +  +  ++
Sbjct: 809 NKDKPERIDCFSSQT--ELVVACGHKYTIALEVNASLY 844



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 66/165 (40%), Gaps = 31/165 (18%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G  +  VA G  HT+ L+  G+++ WG G  GQLG G   +      P+P          
Sbjct: 713 GSSVVDVACGYTHTVVLTASGELYSWGLGEYGQLGTGDVYQ------PLP---------- 756

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDD 339
                   V         P    + + CG  HS   T+   +  +G   YG CG G T +
Sbjct: 757 ------ARVQLPADALCAPDQLAR-VYCGAFHSIATTEQRVMFAWGLNSYGACGLGHTAN 809

Query: 340 ELSP---NCVSSLLGIQIEGVAA-GLWHTICISSDGDVYAFGGNQ 380
           +  P   +C SS    Q E V A G  +TI +  +  +Y    +Q
Sbjct: 810 KDKPERIDCFSS----QTELVVACGHKYTIALEVNASLYTHSPSQ 850


>gi|432104195|gb|ELK31017.1| RCC1 and BTB domain-containing protein 2 [Myotis davidii]
          Length = 526

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 63/175 (36%), Positives = 105/175 (60%), Gaps = 6/175 (3%)

Query: 303 KGIAC----GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS-LLGIQIEGV 357
           K IAC     G H  + T  G + T+G   Y Q G G+T+  L P  +S+ L    +  V
Sbjct: 74  KKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKHVIEV 133

Query: 358 AAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARH 417
           A G +H++ ++SDG+V+A+G N  GQ+G+G    + +PR + + SL+N    +++CG   
Sbjct: 134 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTS-SLQNKVVVNIACGQMC 192

Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           +  + D+G+V+ WG+N  GQLGLG   +++ P ++ ++G   + VACG+ HTL+L
Sbjct: 193 SMAVVDNGEVYVWGYNGNGQLGLGSSGNQSTPCRLALQGVRVQRVACGYAHTLVL 247



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/238 (31%), Positives = 121/238 (50%), Gaps = 31/238 (13%)

Query: 220 GVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
           G +IA ++ G G H +  +  G+V+ WG+    QLG G+     ++   +PC  S+    
Sbjct: 73  GKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT-----TNHGLVPCHIST---- 123

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
                             +   +V  +ACG  HS V+T  G +  +G+   GQ G GST 
Sbjct: 124 -----------------NLSNKHVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTA 166

Query: 339 DELSPNCV-SSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
           ++  P  V SSL    +  +A G   ++ +  +G+VY +G N  GQLG G    ++ P  
Sbjct: 167 NQPIPRRVTSSLQNKVVVNIACGQMCSMAVVDNGEVYVWGYNGNGQLGLGSSGNQSTPCR 226

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
           L   +L+ V  + V+CG  HT V+ D+G+V+ WG N YGQLG G+  +++ P+ V +E
Sbjct: 227 L---ALQGVRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVVE 281



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 59/150 (39%), Gaps = 54/150 (36%)

Query: 370 DGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPS--------------------------- 402
           + +V+  G N  G LG G  Q+   PR LD+ S                           
Sbjct: 40  NDEVFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTW 99

Query: 403 -------------------------LENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQ 437
                                    L N H   V+CG+ H+ V+  DG+VF WG+N  GQ
Sbjct: 100 GHNAYSQLGNGTTNHGLVPCHISTNLSNKHVIEVACGSYHSLVLTSDGEVFAWGYNNSGQ 159

Query: 438 LGLGDVIDRNIPSQVT--IEGCVPRNVACG 465
           +G G   ++ IP +VT  ++  V  N+ACG
Sbjct: 160 VGSGSTANQPIPRRVTSSLQNKVVVNIACG 189



 Score = 38.9 bits (89), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 58/136 (42%), Gaps = 24/136 (17%)

Query: 14  VFMWGYL-PGALPQRSPILSPLVVRLPLTVGSAWRD------VCGGGCGFAMAISDSRKL 66
           VF WGY   G +   S    P+    P  V S+ ++       CG  C  +MA+ D+ ++
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPI----PRRVTSSLQNKVVVNIACGQMC--SMAVVDNGEV 202

Query: 67  ITWGSTDDLGQSYVTSGKHGEIPEPFPLPTE-ASIVKAAAGWAHCVAVTEGGEVYTWGWK 125
             WG     G   +  G  G    P  L  +   + + A G+AH + +T+ G+VY WG  
Sbjct: 203 YVWGYN---GNGQLGLGSSGNQSTPCRLALQGVRVQRVACGYAHTLVLTDEGQVYAWG-- 257

Query: 126 ECVPSGRVFGDLSTGT 141
                   +G L TG 
Sbjct: 258 -----ANSYGQLGTGN 268


>gi|195168456|ref|XP_002025047.1| GL26839 [Drosophila persimilis]
 gi|194108492|gb|EDW30535.1| GL26839 [Drosophila persimilis]
          Length = 3840

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 134/306 (43%), Gaps = 80/306 (26%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GG+H LAL+  G+V+ WG G +G+LG G+R+              SY + + 
Sbjct: 3064 VKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRM--------------SYDRPKL 3109

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                            + G  V  IACG  HSA IT +G +LT+G G YG+ G G ++D+
Sbjct: 3110 VE-------------HLNGMNVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQ 3156

Query: 341  LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V +LLG +   +A  +G   T+CI+ D +V+++G   +G+LG GG     LP  +
Sbjct: 3157 LRPQLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKI 3216

Query: 399  DA--------------------------------------------------PSLENVHS 408
            ++                                                   +L+    
Sbjct: 3217 ESLAGLGVIKVECGSQFSVALTKSGAVYTWSKGDFHRLGHGSVDHVRRPKKVAALQGKKI 3276

Query: 409  KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWW 467
             S++ G+ H    +D G+V+ WG N  GQLG G V     P  V  ++G     V CG  
Sbjct: 3277 ISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSA 3336

Query: 468  HTLLLA 473
            HTL L+
Sbjct: 3337 HTLALS 3342



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 122/255 (47%), Gaps = 36/255 (14%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GG+H LAL+  G+V+ WG G +G+LG G+R  +   P  +  + S   +D  
Sbjct: 1919 VKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTL-DKPRLVETLRSKKIRD-- 1975

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                    +ACG  HSA I+  G L T+G G YG+ G G    +
Sbjct: 1976 ------------------------VACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQ 2011

Query: 341  LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V++L G ++  VA G     T+ ++ DG V+++G   FG+LG GG +    P  +
Sbjct: 2012 LKPKLVAALAGRRVIQVACGSRDAQTLALTEDGSVFSWGDGDFGKLGRGGSEGSDTPHEI 2071

Query: 399  DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCV 458
            +   L  +    + CGA+ +  +   G+V+ WG   Y +LG G   D+++     I G  
Sbjct: 2072 E--RLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGG--DQHVRKPQPIGGLR 2127

Query: 459  PR---NVACGWWHTL 470
             R   +VA G  H L
Sbjct: 2128 GRRVIHVAVGALHCL 2142



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 94/324 (29%), Positives = 135/324 (41%), Gaps = 50/324 (15%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V   +G  HC+A+T  GEVY WG  E        G L  G  +  D        L E ++
Sbjct: 3067 VAVNSGGKHCLALTTEGEVYAWGEGE-------DGKLGHGNRMSYD-----RPKLVEHLN 3114

Query: 161  PRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPG 220
              + V+  + G++       SG        ++  K        GD      P LV    G
Sbjct: 3115 GMN-VADIACGSAHSAAITASGHV------LTWGKGRYGRLGHGDSEDQLRPQLVEALLG 3167

Query: 221  VRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
             R   +A  +G   TL ++D   VW WG G  G+LG G      S    +P     Y  +
Sbjct: 3168 YRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGG-----SDGCKLP-----YKIE 3217

Query: 279  RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
              A L                  V  + CG + S  +T +GA+ T+  G + + G GS D
Sbjct: 3218 SLAGLG-----------------VIKVECGSQFSVALTKSGAVYTWSKGDFHRLGHGSVD 3260

Query: 339  DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
                P  V++L G +I  +A G  H +  S  G+VY +G N  GQLG G   A   PRL+
Sbjct: 3261 HVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLV 3320

Query: 399  DAPSLENVHSKSVSCGARHTAVIA 422
             A  L+  H   V+CG+ HT  ++
Sbjct: 3321 AA--LQGKHIVKVTCGSAHTLALS 3342



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 72/255 (28%), Positives = 117/255 (45%), Gaps = 30/255 (11%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            +R   +A G +    +   G+V+  G G  G+LGLG     V  PH +P +     K   
Sbjct: 1865 LRPIHIAGGSKSLFIVGQNGKVYACGEGTNGRLGLGV-THNVPLPHQLPVLHQYVVK--- 1920

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                + +V+S                 GG+H+  +T  G + ++G G  G+ G G+    
Sbjct: 1921 ----KVAVHS-----------------GGKHALALTLDGKVFSWGEGEDGKLGHGNRTTL 1959

Query: 341  LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
              P  V +L   +I  VA G  H+  ISS G++Y +G  ++G+LG G +  +  P+L+ A
Sbjct: 1960 DKPRLVETLRSKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVAA 2019

Query: 401  PSLENVHSKSVSCGAR--HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGC 457
              L       V+CG+R   T  + +DG VF WG   +G+LG G     + P ++  + G 
Sbjct: 2020 --LAGRRVIQVACGSRDAQTLALTEDGSVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGI 2077

Query: 458  VPRNVACGWWHTLLL 472
                + CG   +L L
Sbjct: 2078 GVIQIECGAQFSLAL 2092



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 108/386 (27%), Positives = 152/386 (39%), Gaps = 73/386 (18%)

Query: 56   FAMAISDSRKLITWGSTDDL------GQSYV----TSGKHG-----EIPEPFPLPT-EAS 99
            F+  IS  R +   G +  L      G+ Y     T+G+ G      +P P  LP     
Sbjct: 1858 FSQTISRLRPIHIAGGSKSLFIVGQNGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQY 1917

Query: 100  IVKAAA---GWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLT 156
            +VK  A   G  H +A+T  G+V++WG  E        G L  G     D      +  +
Sbjct: 1918 VVKKVAVHSGGKHALALTLDGKVFSWGEGE-------DGKLGHGNRTTLDKPRLVETLRS 1970

Query: 157  EQVSPRSQVSRSSGGTSSGTDGR--GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCL 214
            +++   +  S  S   SS  +    G GE G                  GD      P L
Sbjct: 1971 KKIRDVACGSSHSAAISSQGELYTWGLGEYGRL--------------GHGDNATQLKPKL 2016

Query: 215  VTLNPGVRIATVAAGGR--HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIE 272
            V    G R+  VA G R   TLAL++ G V+ WG G  G+LG G                
Sbjct: 2017 VAALAGRRVIQVACGSRDAQTLALTEDGSVFSWGDGDFGKLGRGG--------------- 2061

Query: 273  SSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQC 332
             S G D    + R S           G  V  I CG + S  +T AG + T+G G Y + 
Sbjct: 2062 -SEGSDTPHEIERLS-----------GIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRL 2109

Query: 333  GQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAE 392
            G G       P  +  L G ++  VA G  H + ++  G VYA+G N  GQ G+G     
Sbjct: 2110 GHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVN 2169

Query: 393  TLPRLLDAPSLENVHSKSVSCGARHT 418
              P L+    L+ V    V+CG+ H+
Sbjct: 2170 KKPALVIG--LDAVFVNRVACGSSHS 2193



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 107/230 (46%), Gaps = 38/230 (16%)

Query: 242  VWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPG 299
            ++GWG+   GQLG   GSRI+      P PC   S  +    A                 
Sbjct: 2979 IYGWGHNHRGQLGGLEGSRIKT-----PTPCEALSLLRPVQLA----------------- 3016

Query: 300  NYVKGIACGGRHSAV-ITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
                    GG  S   +T  G L   G+G  G+ G G  D    P  + SL  + ++ VA
Sbjct: 3017 --------GGEQSLFAVTPDGKLFATGYGSGGRLGVGGADSWAIPTLLGSLQHVFVKKVA 3068

Query: 359  --AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR 416
              +G  H + ++++G+VYA+G  + G+LG G   +   P+L++   L  ++   ++CG+ 
Sbjct: 3069 VNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVE--HLNGMNVADIACGSA 3126

Query: 417  HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
            H+A I   G V  WG  +YG+LG GD  D+  P  V  + G    ++ACG
Sbjct: 3127 HSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPQLVEALLGYRAIDIACG 3176



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 89/345 (25%), Positives = 136/345 (39%), Gaps = 60/345 (17%)

Query: 24   LPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDD--LGQSYVT 81
            LP + P+L   VV+         +     G   A+A++   K+ +WG  +D  LG    T
Sbjct: 1907 LPHQLPVLHQYVVK---------KVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRT 1957

Query: 82   SGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGT 141
            +     + E         I   A G +H  A++  GE+YTWG  E    GR  G     T
Sbjct: 1958 TLDKPRLVETL---RSKKIRDVACGSSHSAAISSQGELYTWGLGE---YGR-LGHGDNAT 2010

Query: 142  GLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGR-GSGEEGSKRRRISLAKQTAES 200
             L   +    +     QV+  S+ +++   T  G+    G G+ G       L +  +E 
Sbjct: 2011 QLKPKLVAALAGRRVIQVACGSRDAQTLALTEDGSVFSWGDGDFG------KLGRGGSEG 2064

Query: 201  SSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR 260
            S +  E        +    G+ +  +  G + +LAL+  G+VW WG G   +LG G   +
Sbjct: 2065 SDTPHE--------IERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGD-Q 2115

Query: 261  MVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA 320
             V  P PI                         G R  G  V  +A G  H   +TDAG 
Sbjct: 2116 HVRKPQPI------------------------GGLR--GRRVIHVAVGALHCLAVTDAGQ 2149

Query: 321  LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTI 365
            +  +G   +GQ G G+T     P  V  L  + +  VA G  H+I
Sbjct: 2150 VYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSI 2194



 Score = 40.8 bits (94), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 5/73 (6%)

Query: 53   GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
            G  F++A++ S  + TW   D   LG   V    H   P+         I+  A G  HC
Sbjct: 3230 GSQFSVALTKSGAVYTWSKGDFHRLGHGSV---DHVRRPKKVAALQGKKIISIATGSLHC 3286

Query: 111  VAVTEGGEVYTWG 123
            VA ++ GEVYTWG
Sbjct: 3287 VACSDSGEVYTWG 3299


>gi|307204521|gb|EFN83201.1| Probable E3 ubiquitin-protein ligase HERC2 [Harpegnathos saltator]
          Length = 4791

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 88/303 (29%), Positives = 130/303 (42%), Gaps = 80/303 (26%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            ++   V +GG+H LALS  G V+ WG G +G+LG G+R+              SY + + 
Sbjct: 4019 IKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRL--------------SYDRPKL 4064

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                            + G  +  IACGG HSA IT AG L T+G G YG+ G G +DD+
Sbjct: 4065 VE-------------DLLGIEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQ 4111

Query: 341  LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V +L   ++  VA  +G   T+C++ D +V+++G   +G+LG GG     +P  +
Sbjct: 4112 LRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKI 4171

Query: 399  DA--------------------------------------------------PSLENVHS 408
            D+                                                   +L+    
Sbjct: 4172 DSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKI 4231

Query: 409  KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWW 467
             S++ G+ H    +D G+VF WG N  GQLG G       P  V  ++G     VACG  
Sbjct: 4232 ISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHALQGKKITRVACGSA 4291

Query: 468  HTL 470
            HTL
Sbjct: 4292 HTL 4294



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 89/273 (32%), Positives = 131/273 (47%), Gaps = 35/273 (12%)

Query: 228  AGGRHTL-ALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSY---------GK 277
            AGG  TL A++  G+V+  GYG  G+LG+G     V  P  +  I+  +         GK
Sbjct: 3971 AGGEQTLFAVTADGKVYSTGYGAAGRLGIGG-TDSVMVPTLLESIQHVFIKKVAVNSGGK 4029

Query: 278  DRSAALSRGSVNSEGPG------------FRVP-------GNYVKGIACGGRHSAVITDA 318
               A  S G V S G G            +  P       G  +  IACGG HSA IT A
Sbjct: 4030 HCLALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLVEDLLGIEIVDIACGGHHSAAITSA 4089

Query: 319  GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAF 376
            G L T+G G YG+ G G +DD+L P  V +L   ++  VA  +G   T+C++ D +V+++
Sbjct: 4090 GWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSW 4149

Query: 377  GGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYG 436
            G   +G+LG GG     +P  +D  SL  +    V CG++ +  +   G V+ WG   Y 
Sbjct: 4150 GDGDYGKLGRGGSDGCKVPLKID--SLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYH 4207

Query: 437  QLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWH 468
            +LG G       P +V  ++G    ++A G  H
Sbjct: 4208 RLGHGTDDHVRRPRKVAALQGKKIISIATGSLH 4240



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 89/312 (28%), Positives = 130/312 (41%), Gaps = 82/312 (26%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            ++   V +GG+H LAL+  G+V+ WG G +G+LG G+    +  P  I  ++S   +D  
Sbjct: 3038 IKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGN-CTTLDKPRLIESLKSKRIRD-- 3094

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                    IACG  HSA I   G L T+G G YG+ G G T  +
Sbjct: 3095 ------------------------IACGSGHSAAIASNGELYTWGLGEYGRLGHGDTATQ 3130

Query: 341  LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            + P  V +L G ++  VA G     T+ +++DG VY +G   FG+LG GG      P L+
Sbjct: 3131 MKPKLVQALSGQRVVQVACGSRDAQTMSLTADGCVYTWGDGDFGKLGRGGSDGCYTPLLV 3190

Query: 399  D----------------------------------------------APSL-ENVHSKS- 410
            D                                               P+L E +  K  
Sbjct: 3191 DRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKI 3250

Query: 411  --VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWW 467
              V+ GA H   + D G+V+ WG N +GQ G G  I    PS V  ++      V+CG  
Sbjct: 3251 VHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTIVNRKPSLVHELDDTRMNRVSCGSS 3310

Query: 468  HTL--LLAVPPT 477
            H++  +L   PT
Sbjct: 3311 HSIAWILVDQPT 3322



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 122/256 (47%), Gaps = 32/256 (12%)

Query: 218 NPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI-----RMVSSPHPIPCIE 272
            P   IA+  + G+H LAL+  G V+ WG G  G+LG G  I     +++ +      I 
Sbjct: 507 KPVTMIAS-HSDGKHYLALTQDGCVYSWGNGDGGRLGHGDNISHDEPKLIETLLEKNIIF 565

Query: 273 SSYGKDRSAALS---------RGSVNSEGPG----FRVP-------GNYVKGIACGG--R 310
            + G   SAALS         RG+    G G      VP       G+ V  +ACG    
Sbjct: 566 IACGSTYSAALSASGELYTWGRGNYGRLGHGSNDDVTVPTLVTTLKGHMVVHVACGSGDS 625

Query: 311 HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
            +  +T +G + ++G G YG+ G+G +D   +P  V  LL I +  V  G   +  +++ 
Sbjct: 626 QTLCVTASGIVFSWGDGDYGKLGRGGSDGSKTPKIVDKLLDINVVRVFCGGQFSAALTAR 685

Query: 371 GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
           G+VY +G     +LG G ++    P+L++  SL +   K +S G  H   + +D  V+ W
Sbjct: 686 GEVYTWGKGDAYRLGHGNEEHVRYPKLIE--SLRDKKIKDLSVGGTHILALTEDQFVYGW 743

Query: 431 GWNKYGQLG--LGDVI 444
           G N YGQ+   LG V+
Sbjct: 744 GRNDYGQIDPTLGPVV 759



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 108/234 (46%), Gaps = 29/234 (12%)

Query: 212  PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS-----RIRMVSSPH 266
            P LV    G+ I  +A GG H+ A++  G ++ WG G  G+LG G      R ++V +  
Sbjct: 4062 PKLVEDLLGIEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQ 4121

Query: 267  PIPCIESSYGKDRSAAL--------------SRGSVNSEGP-GFRVP-------GNYVKG 304
                I+ + G   +  L                G +   G  G +VP       G  V  
Sbjct: 4122 DYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVIK 4181

Query: 305  IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
            + CG + S  +T +GA+ T+G G Y + G G+ D    P  V++L G +I  +A G  H 
Sbjct: 4182 VECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHC 4241

Query: 365  ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
            +  S  G+V+ +G N  GQLG G   A   PRL+ A  L+      V+CG+ HT
Sbjct: 4242 VACSDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHA--LQGKKITRVACGSAHT 4293



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 106/218 (48%), Gaps = 29/218 (13%)

Query: 226  VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
            +A G +    +S  G+++  G G  G+LGLG    M   P  IP + S Y       + +
Sbjct: 2989 IAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDDYNMCE-PKLIPFL-SQY------VIKK 3040

Query: 286  GSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNC 345
             +V+S                 GG+H+  +T  G + ++G G  G+ G G+      P  
Sbjct: 3041 VAVHS-----------------GGKHALALTQDGKVFSWGEGEDGKLGHGNCTTLDKPRL 3083

Query: 346  VSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLEN 405
            + SL   +I  +A G  H+  I+S+G++Y +G  ++G+LG G    +  P+L+ A S + 
Sbjct: 3084 IESLKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDTATQMKPKLVQALSGQR 3143

Query: 406  VHSKSVSCGAR--HTAVIADDGKVFCWGWNKYGQLGLG 441
            V    V+CG+R   T  +  DG V+ WG   +G+LG G
Sbjct: 3144 V--VQVACGSRDAQTMSLTADGCVYTWGDGDFGKLGRG 3179



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 115/238 (48%), Gaps = 36/238 (15%)

Query: 233  TLALSDIGQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNS 290
            TL+    G ++GWG+   GQLG   G++I++     P PC                S+++
Sbjct: 3925 TLSWDGSGAIYGWGHNHRGQLGGLEGAKIKL-----PAPC---------------ESLSA 3964

Query: 291  EGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLL 350
              P           +A G +    +T  G + + G+G  G+ G G TD  + P  + S+ 
Sbjct: 3965 LRP---------IQLAGGEQTLFAVTADGKVYSTGYGAAGRLGIGGTDSVMVPTLLESIQ 4015

Query: 351  GIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHS 408
             + I+ VA  +G  H + +SS+G VY++G    G+LG G   +   P+L++   L  +  
Sbjct: 4016 HVFIKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLVE--DLLGIEI 4073

Query: 409  KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
              ++CG  H+A I   G ++ WG  +YG+LG GD  D+  P  V  ++     +VACG
Sbjct: 4074 VDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACG 4131



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 122/471 (25%), Positives = 180/471 (38%), Gaps = 102/471 (21%)

Query: 11   ERVVFMWGY--------LPGA---LPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMA 59
            +  V++WG         L G+   +P RS +LS L    P+ +         GG      
Sbjct: 2950 QSAVYVWGLNDKDQLGGLKGSKIKIPVRSEVLSKLK---PIHIA--------GGSKTLFI 2998

Query: 60   ISDSRKLITWGSTDD----LGQSYVTSGKHGEIPEPFPLPTEASIVKAA--AGWAHCVAV 113
            +S   KL   G   +    LG  Y         P+  P  ++  I K A  +G  H +A+
Sbjct: 2999 VSQEGKLYACGEGTNGRLGLGDDYNMCE-----PKLIPFLSQYVIKKVAVHSGGKHALAL 3053

Query: 114  TEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTS 173
            T+ G+V++WG  E        G L  G     D      S  ++++   +  S  S   +
Sbjct: 3054 TQDGKVFSWGEGE-------DGKLGHGNCTTLDKPRLIESLKSKRIRDIACGSGHSAAIA 3106

Query: 174  SGTDGR--GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGR 231
            S  +    G GE G                  GD      P LV    G R+  VA G R
Sbjct: 3107 SNGELYTWGLGEYGRL--------------GHGDTATQMKPKLVQALSGQRVVQVACGSR 3152

Query: 232  --HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVN 289
               T++L+  G V+ WG G  G+LG G                             GS  
Sbjct: 3153 DAQTMSLTADGCVYTWGDGDFGKLGRG-----------------------------GSDG 3183

Query: 290  SEGPGF--RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVS 347
               P    R+ G  V  + CG + S  +T  G + T+G G Y + G G+      P  V 
Sbjct: 3184 CYTPLLVDRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVE 3243

Query: 348  SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVH 407
             L G +I  VA G  H + ++  G VYA+G N  GQ G G       P L+    L++  
Sbjct: 3244 GLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTIVNRKPSLVH--ELDDTR 3301

Query: 408  SKSVSCGARHTA--VIAD-------DGKVFCWGWNKYGQ--LGLGDVIDRN 447
               VSCG+ H+   ++ D       +   F    +  GQ  LGLG+  ++N
Sbjct: 3302 MNRVSCGSSHSIAWILVDQPTNGNQEPVTFQTARDPLGQMCLGLGNAAEQN 3352



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 86/164 (52%), Gaps = 5/164 (3%)

Query: 305  IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA--AGLW 362
            IA G +   +++  G L   G G  G+ G G   +   P  +  L    I+ VA  +G  
Sbjct: 2989 IAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDDYNMCEPKLIPFLSQYVIKKVAVHSGGK 3048

Query: 363  HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIA 422
            H + ++ DG V+++G  + G+LG G       PRL++  SL++   + ++CG+ H+A IA
Sbjct: 3049 HALALTQDGKVFSWGEGEDGKLGHGNCTTLDKPRLIE--SLKSKRIRDIACGSGHSAAIA 3106

Query: 423  DDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
             +G+++ WG  +YG+LG GD   +  P  V  + G     VACG
Sbjct: 3107 SNGELYTWGLGEYGRLGHGDTATQMKPKLVQALSGQRVVQVACG 3150



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 63/104 (60%), Gaps = 3/104 (2%)

Query: 363 HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIA 422
           H + ++ DG VY++G    G+LG G + +   P+L++    +N+    ++CG+ ++A ++
Sbjct: 520 HYLALTQDGCVYSWGNGDGGRLGHGDNISHDEPKLIETLLEKNI--IFIACGSTYSAALS 577

Query: 423 DDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
             G+++ WG   YG+LG G   D  +P+ V T++G +  +VACG
Sbjct: 578 ASGELYTWGRGNYGRLGHGSNDDVTVPTLVTTLKGHMVVHVACG 621



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 77/177 (43%), Gaps = 33/177 (18%)

Query: 212 PCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP 269
           P LVT   G  +  VA  +G   TL ++  G V+ WG G  G+LG G             
Sbjct: 604 PTLVTTLKGHMVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRG------------- 650

Query: 270 CIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITDAGALLTFGWG 327
                           GS  S+ P    ++    V  + CGG+ SA +T  G + T+G G
Sbjct: 651 ----------------GSDGSKTPKIVDKLLDINVVRVFCGGQFSAALTARGEVYTWGKG 694

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQL 384
              + G G+ +    P  + SL   +I+ ++ G  H + ++ D  VY +G N +GQ+
Sbjct: 695 DAYRLGHGNEEHVRYPKLIESLRDKKIKDLSVGGTHILALTEDQFVYGWGRNDYGQI 751



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 80/156 (51%), Gaps = 7/156 (4%)

Query: 318  AGALLTFGWGLYGQCG--QGSTDDELSP-NCVSSLLGIQIEGVAAGLWHTICISSDGDVY 374
            +GA+  +G    GQ G  +G+     +P   +S+L  IQ+ G    L+    +++DG VY
Sbjct: 3931 SGAIYGWGHNHRGQLGGLEGAKIKLPAPCESLSALRPIQLAGGEQTLF---AVTADGKVY 3987

Query: 375  AFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNK 434
            + G    G+LG GG  +  +P LL++     +   +V+ G +H   ++ +G V+ WG   
Sbjct: 3988 STGYGAAGRLGIGGTDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEGD 4047

Query: 435  YGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHT 469
             G+LG G+ +  + P  V  + G    ++ACG  H+
Sbjct: 4048 DGKLGHGNRLSYDRPKLVEDLLGIEIVDIACGGHHS 4083



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 84/301 (27%), Positives = 120/301 (39%), Gaps = 56/301 (18%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFL-TEQV 159
            V   +G  HC+A++  G VY+WG  +        G L  G  L  D  +     L  E V
Sbjct: 4022 VAVNSGGKHCLALSSEGHVYSWGEGD-------DGKLGHGNRLSYDRPKLVEDLLGIEIV 4074

Query: 160  SPRSQVSRSSGGTSSG---TDGRGS-GEEGSKRRRISLAKQTAESSSSGDENLSAFPCLV 215
                    S+  TS+G   T G+G  G  G                  GD +    P +V
Sbjct: 4075 DIACGGHHSAAITSAGWLYTWGKGRYGRLGH-----------------GDSDDQLRPKVV 4117

Query: 216  TLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLG----SRIRM-VSSPHPI 268
                  ++  VA  +G   TL ++D   VW WG G  G+LG G     ++ + + S   +
Sbjct: 4118 EALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGL 4177

Query: 269  PCIESSYGKDRSAALSR-GSVNSEGPG------------FRVP-------GNYVKGIACG 308
              I+   G   S AL+R G+V + G G             R P       G  +  IA G
Sbjct: 4178 GVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATG 4237

Query: 309  GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICIS 368
              H    +D G + T+G    GQ G G+T     P  V +L G +I  VA G  HT+  S
Sbjct: 4238 SLHCVACSDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHALQGKKITRVACGSAHTLAWS 4297

Query: 369  S 369
            +
Sbjct: 4298 T 4298



 Score = 40.8 bits (94), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 8/92 (8%)

Query: 37   RLPLTVGS-AWRDVCGGGCG--FAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEP 91
            ++PL + S A   V    CG  F++A++ S  + TWG  D   LG     +  H   P  
Sbjct: 4166 KVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHG---TDDHVRRPRK 4222

Query: 92   FPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
                    I+  A G  HCVA ++ GEV+TWG
Sbjct: 4223 VAALQGKKIISIATGSLHCVACSDKGEVFTWG 4254


>gi|195060098|ref|XP_001995753.1| GH17927 [Drosophila grimshawi]
 gi|193896539|gb|EDV95405.1| GH17927 [Drosophila grimshawi]
          Length = 4933

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 91/306 (29%), Positives = 135/306 (44%), Gaps = 80/306 (26%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GG+H LAL+  G+V+ WG G +G+LG G+R+              SY  DR 
Sbjct: 4157 VKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRL--------------SY--DRP 4200

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
              L             + G  V  IACG  HSA IT +G +LT+G G YG+ G G ++D+
Sbjct: 4201 KLLEH-----------LNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQ 4249

Query: 341  LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V +LLG +   +A  +G   T+CI+ D +V+++G   +G+LG GG     LP  +
Sbjct: 4250 LRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKI 4309

Query: 399  DA--------------------------------------------------PSLENVHS 408
            ++                                                   +L+    
Sbjct: 4310 ESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKI 4369

Query: 409  KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWW 467
             S++ G+ H    +D G+V+ WG N  GQLG G V     P  V  ++G     V CG  
Sbjct: 4370 ISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSA 4429

Query: 468  HTLLLA 473
            HTL L+
Sbjct: 4430 HTLALS 4435



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 122/255 (47%), Gaps = 36/255 (14%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GG+H LAL+  G+V+ WG G +G+LG G+R              ++  K R 
Sbjct: 2999 VKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNR--------------TTLDKPRL 3044

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                R                ++ IACG  HSA I+  G L T+G G YG+ G G    +
Sbjct: 3045 VEALR-------------AKKIRDIACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQ 3091

Query: 341  LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V++L G ++  VA G     T+ ++ DG V+++G   FG+LG GG +    P  +
Sbjct: 3092 LKPKLVTALCGSRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSATPHEI 3151

Query: 399  DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCV 458
            +   L  +    + CGA+ +  +   G+V+ WG   Y +LG G   D+++     I G  
Sbjct: 3152 E--RLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGG--DQHVRKPQPIAGLR 3207

Query: 459  PR---NVACGWWHTL 470
             R   +VA G  H L
Sbjct: 3208 GRRVIHVAVGALHCL 3222



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 97/324 (29%), Positives = 136/324 (41%), Gaps = 50/324 (15%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V   +G  HC+A+T  GEVY WG  E        G L  G  L  D        L E ++
Sbjct: 4160 VAVNSGGKHCLALTTDGEVYAWGEGE-------DGKLGHGNRLSYD-----RPKLLEHLN 4207

Query: 161  PRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPG 220
              S V+  + G++       SG        ++  K        GD      P LV    G
Sbjct: 4208 GMS-VADIACGSAHSAAITASGHV------LTWGKGRYGRLGHGDSEDQLRPKLVEALLG 4260

Query: 221  VRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
             R   +A  +G   TL ++D   VW WG G  G+LG G      S    +P     Y  +
Sbjct: 4261 YRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGG-----SDGCKLP-----YKIE 4310

Query: 279  RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
              A L                  V  + CG + S  +T +GA+ T+G G + + G GS D
Sbjct: 4311 SLAGLG-----------------VIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVD 4353

Query: 339  DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
                P  V++L G +I  +A G  H +  S  G+VY +G N  GQLG G   A   PRL+
Sbjct: 4354 HVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQRPRLV 4413

Query: 399  DAPSLENVHSKSVSCGARHTAVIA 422
             A  L+  H   V+CG+ HT  ++
Sbjct: 4414 AA--LQGKHIVKVTCGSAHTLALS 4435



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/255 (28%), Positives = 117/255 (45%), Gaps = 30/255 (11%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            +R   +A G +    +S  G+V+  G G  G+LGLG     V  PH +P +     K   
Sbjct: 2945 LRPIHIAGGSKSLFVVSQDGKVFACGEGTNGRLGLGV-THNVPLPHQLPVLHQYVVK--- 3000

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                + +V+S                 GG+H+  +T  G + ++G G  G+ G G+    
Sbjct: 3001 ----KVAVHS-----------------GGKHALALTLDGKVFSWGEGEDGKLGHGNRTTL 3039

Query: 341  LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
              P  V +L   +I  +A G  H+  ISS G++Y +G  ++G+LG G +  +  P+L+ A
Sbjct: 3040 DKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVTA 3099

Query: 401  PSLENVHSKSVSCGAR--HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGC 457
              L       V+CG+R   T  + +DG VF WG   +G+LG G       P ++  + G 
Sbjct: 3100 --LCGSRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSATPHEIERLSGI 3157

Query: 458  VPRNVACGWWHTLLL 472
                + CG   +L L
Sbjct: 3158 GVVQIECGAQFSLAL 3172



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 97/339 (28%), Positives = 137/339 (40%), Gaps = 58/339 (17%)

Query: 88   IPEPFPLPT-EASIVKAAA---GWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGL 143
            +P P  LP     +VK  A   G  H +A+T  G+V++WG  E        G L  G   
Sbjct: 2985 VPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGE-------DGKLGHGNRT 3037

Query: 144  DKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGR--GSGEEGSKRRRISLAKQTAESS 201
              D      +   +++   +  S  S   SS  +    G GE G                
Sbjct: 3038 TLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGRL-------------- 3083

Query: 202  SSGDENLSAFPCLVTLNPGVRIATVAAGGR--HTLALSDIGQVWGWGYGGEGQLGLGSRI 259
              GD      P LVT   G R+  VA G R   TLAL++ G V+ WG G  G+LG G   
Sbjct: 3084 GHGDNATQLKPKLVTALCGSRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGS- 3142

Query: 260  RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAG 319
               ++PH I                           R+ G  V  I CG + S  +T AG
Sbjct: 3143 EGSATPHEIE--------------------------RLSGIGVVQIECGAQFSLALTRAG 3176

Query: 320  ALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN 379
             + T+G G Y + G G       P  ++ L G ++  VA G  H + ++  G VYA+G N
Sbjct: 3177 EVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDN 3236

Query: 380  QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
              GQ G+G       P L+    L+ V    V+CG+ H+
Sbjct: 3237 DHGQQGSGNTFVNKKPALVIG--LDAVFVNRVACGSSHS 3273



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 118/259 (45%), Gaps = 57/259 (22%)

Query: 230 GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVN 289
           GRH LA+ +    + WG G   +LG G             C          + + R    
Sbjct: 650 GRHFLAVDNNFNAYSWGTGDNRRLGHGD------------CHSRELPTKIESLVRR---- 693

Query: 290 SEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSL 349
                       VK + CG  +SA IT  G L T+G G YG+ G G +DD+  P  V +L
Sbjct: 694 ------------VKSVYCGCSYSAAITLRGNLYTWGRGNYGRLGHGISDDQCLPTMVMAL 741

Query: 350 LGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA-PSLENV 406
              Q+  VA  +G  HT+C++++G VYA+G   +G+LG     +   P L++  P ++ V
Sbjct: 742 KDHQVVDVALGSGDAHTLCLTNEGLVYAWGDGDYGKLGNASCNSSLQPLLIECLPRVQRV 801

Query: 407 HSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC-VPR----- 460
            +     G++ +  +  +G+++ WG  K   LG   +++RN      ++GC VPR     
Sbjct: 802 FA-----GSQFSLALTGEGQLYSWG--KASCLG-HQLVERN------VQGCSVPRLITSL 847

Query: 461 ------NVACGWWHTLLLA 473
                 +VA G  H L L+
Sbjct: 848 QHKRIVDVAVGVTHCLALS 866



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 107/229 (46%), Gaps = 36/229 (15%)

Query: 242  VWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPG 299
            ++GWG+   GQLG   GSRI+      P PC                    E      P 
Sbjct: 4072 IYGWGHNHRGQLGGLEGSRIKT-----PTPC--------------------EALSLLRPV 4106

Query: 300  NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA- 358
                 +A G +    +T  G L   G+G  G+ G G +D    P  + SL  + ++ VA 
Sbjct: 4107 Q----LAGGEQSLFAVTPDGKLFATGYGSGGRLGVGGSDSWSIPTLLGSLQHVFVKKVAV 4162

Query: 359  -AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARH 417
             +G  H + +++DG+VYA+G  + G+LG G   +   P+LL+   L  +    ++CG+ H
Sbjct: 4163 NSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRLSYDRPKLLE--HLNGMSVADIACGSAH 4220

Query: 418  TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
            +A I   G V  WG  +YG+LG GD  D+  P  V  + G    ++ACG
Sbjct: 4221 SAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACG 4269



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 89/345 (25%), Positives = 132/345 (38%), Gaps = 60/345 (17%)

Query: 24   LPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDD--LGQSYVT 81
            LP + P+L   VV+         +     G   A+A++   K+ +WG  +D  LG    T
Sbjct: 2987 LPHQLPVLHQYVVK---------KVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRT 3037

Query: 82   SGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGT 141
            +     + E         I   A G +H  A++  GE+YTWG  E    GR  G     T
Sbjct: 3038 TLDKPRLVEAL---RAKKIRDIACGSSHSAAISSQGELYTWGLGE---YGR-LGHGDNAT 3090

Query: 142  GLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGR-GSGEEGSKRRRISLAKQTAES 200
             L   +          QV+  S+ +++   T  G     G G+ G   R           
Sbjct: 3091 QLKPKLVTALCGSRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGR----------- 3139

Query: 201  SSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR 260
               G    SA P  +    G+ +  +  G + +LAL+  G+VW WG G   +LG G   +
Sbjct: 3140 ---GGSEGSATPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGD-Q 3195

Query: 261  MVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA 320
             V  P PI                         G R  G  V  +A G  H   +TDAG 
Sbjct: 3196 HVRKPQPI------------------------AGLR--GRRVIHVAVGALHCLAVTDAGQ 3229

Query: 321  LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTI 365
            +  +G   +GQ G G+T     P  V  L  + +  VA G  H++
Sbjct: 3230 VYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSM 3274



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/255 (23%), Positives = 109/255 (42%), Gaps = 34/255 (13%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
           R+ +V  G  ++ A++  G ++ WG G  G+LG G     +S    +P +  +    +  
Sbjct: 693 RVKSVYCGCSYSAAITLRGNLYTWGRGNYGRLGHG-----ISDDQCLPTMVMALKDHQVV 747

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL 341
            ++ GS                    G  H+  +T+ G +  +G G YG+ G  S +  L
Sbjct: 748 DVALGS--------------------GDAHTLCLTNEGLVYAWGDGDYGKLGNASCNSSL 787

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF--GQLGTGGDQAETLPRLLD 399
            P  +  L  +Q   V AG   ++ ++ +G +Y++G       QL     Q  ++PRL+ 
Sbjct: 788 QPLLIECLPRVQ--RVFAGSQFSLALTGEGQLYSWGKASCLGHQLVERNVQGCSVPRLIT 845

Query: 400 APSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNI---PSQVTIEG 456
             SL++     V+ G  H   ++  G++F WG N   Q+    V    +   P  VT+  
Sbjct: 846 --SLQHKRIVDVAVGVTHCLALSSAGEIFGWGRNDNQQICPASVCSEPLLRQPILVTLPT 903

Query: 457 CVPRNVACGWWHTLL 471
                +AC    +L+
Sbjct: 904 LPASGMACTAVQSLI 918



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 4/154 (2%)

Query: 307 CGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC 366
           C GRH   + +     ++G G   + G G       P  + SL+  +++ V  G  ++  
Sbjct: 648 CEGRHFLAVDNNFNAYSWGTGDNRRLGHGDCHSRELPTKIESLVR-RVKSVYCGCSYSAA 706

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           I+  G++Y +G   +G+LG G    + LP ++ A     V   ++  G  HT  + ++G 
Sbjct: 707 ITLRGNLYTWGRGNYGRLGHGISDDQCLPTMVMALKDHQVVDVALGSGDAHTLCLTNEGL 766

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPR 460
           V+ WG   YG+LG       N   Q  +  C+PR
Sbjct: 767 VYAWGDGDYGKLGNASC---NSSLQPLLIECLPR 797



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 67/226 (29%), Positives = 93/226 (41%), Gaps = 36/226 (15%)

Query: 38  LPLTVGSAWRDV--CGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLP 95
           LP  + S  R V     GC ++ AI+    L TWG  +     Y   G HG I +   LP
Sbjct: 683 LPTKIESLVRRVKSVYCGCSYSAAITLRGNLYTWGRGN-----YGRLG-HG-ISDDQCLP 735

Query: 96  T------EASIVKAA--AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDV 147
           T      +  +V  A  +G AH + +T  G VY WG  +    G+  G+ S  + L   +
Sbjct: 736 TMVMALKDHQVVDVALGSGDAHTLCLTNEGLVYAWGDGD---YGK-LGNASCNSSLQPLL 791

Query: 148 FERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDEN 207
            E           PR  V R   G+       G G+  S  +   L  Q  E +  G   
Sbjct: 792 IE---------CLPR--VQRVFAGSQFSLALTGEGQLYSWGKASCLGHQLVERNVQG--- 837

Query: 208 LSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQL 253
             + P L+T     RI  VA G  H LALS  G+++GWG     Q+
Sbjct: 838 -CSVPRLITSLQHKRIVDVAVGVTHCLALSSAGEIFGWGRNDNQQI 882



 Score = 47.0 bits (110), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 79/157 (50%), Gaps = 9/157 (5%)

Query: 319  GALLTFGWGL--YGQCG--QGSTDDELSP-NCVSSLLGIQIEGVAAGLWHTICISSDGDV 373
            GA   +GWG    GQ G  +GS     +P   +S L  +Q+ G    L+    ++ DG +
Sbjct: 4068 GASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLF---AVTPDGKL 4124

Query: 374  YAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWN 433
            +A G    G+LG GG  + ++P LL +     V   +V+ G +H   +  DG+V+ WG  
Sbjct: 4125 FATGYGSGGRLGVGGSDSWSIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEG 4184

Query: 434  KYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHT 469
            + G+LG G+ +  + P  +  + G    ++ACG  H+
Sbjct: 4185 EDGKLGHGNRLSYDRPKLLEHLNGMSVADIACGSAHS 4221


>gi|281361147|ref|NP_608388.2| HERC2 [Drosophila melanogaster]
 gi|91206848|sp|Q9VR91.3|HERC2_DROME RecName: Full=Probable E3 ubiquitin-protein ligase HERC2; AltName:
            Full=HECT domain and RCC1-like domain-containing protein
            2
 gi|272506184|gb|AAF50913.3| HERC2 [Drosophila melanogaster]
          Length = 4912

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 134/306 (43%), Gaps = 80/306 (26%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GG+H LAL+  G+V+ WG G +G+LG G+R+              SY + + 
Sbjct: 4136 VKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRM--------------SYDRPKL 4181

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                            + G  V  IACG  HSA IT +G +LT+G G YG+ G G ++D+
Sbjct: 4182 VE-------------HLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQ 4228

Query: 341  LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V +LLG +   +A  +G   T+CI+ D +V+++G   +G+LG GG     LP  +
Sbjct: 4229 LRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKI 4288

Query: 399  DA--------------------------------------------------PSLENVHS 408
            ++                                                   +L+    
Sbjct: 4289 ESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKI 4348

Query: 409  KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWW 467
             S++ G+ H    +D G+V+ WG N  GQLG G V     P  V  ++G     V CG  
Sbjct: 4349 ISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSA 4408

Query: 468  HTLLLA 473
            HTL L+
Sbjct: 4409 HTLALS 4414



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 122/255 (47%), Gaps = 36/255 (14%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GG+H LAL+  G+V+ WG G +G+LG G+R              ++  K R 
Sbjct: 3073 VKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNR--------------TTLDKPRL 3118

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                R                ++ +ACG  HSA I+  G L T+G G YG+ G G    +
Sbjct: 3119 VEALR-------------AKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQ 3165

Query: 341  LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V++L G ++  VA G     T+ ++ DG V+++G   FG+LG GG +    P  +
Sbjct: 3166 LKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEI 3225

Query: 399  DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCV 458
            +   L  +    + CGA+ +  +   G+V+ WG   Y +LG G   D+++     I G  
Sbjct: 3226 E--RLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGG--DQHVRKPQPIGGLR 3281

Query: 459  PR---NVACGWWHTL 470
             R   +VA G  H L
Sbjct: 3282 GRRVIHVAVGALHCL 3296



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 119/255 (46%), Gaps = 30/255 (11%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            +R   +A G +    +S  G+V+  G G  G+LGLG     V  PH +P +       R 
Sbjct: 3019 LRPIHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLGV-THNVPLPHQLPVL-------RQ 3070

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
              + + +V+S                 GG+H+  +T  G + ++G G  G+ G G+    
Sbjct: 3071 YVVKKVAVHS-----------------GGKHALALTLDGKVFSWGEGEDGKLGHGNRTTL 3113

Query: 341  LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
              P  V +L   +I  VA G  H+  ISS G++Y +G  ++G+LG G +  +  P+L+ A
Sbjct: 3114 DKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTA 3173

Query: 401  PSLENVHSKSVSCGAR--HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGC 457
              L       V+CG+R   T  + +DG VF WG   +G+LG G     + P ++  + G 
Sbjct: 3174 --LAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGI 3231

Query: 458  VPRNVACGWWHTLLL 472
                + CG   +L L
Sbjct: 3232 GVVQIECGAQFSLAL 3246



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 96/324 (29%), Positives = 136/324 (41%), Gaps = 50/324 (15%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V   +G  HC+A+T  GEVY WG  E        G L  G  +  D        L E ++
Sbjct: 4139 VAVNSGGKHCLALTTEGEVYAWGEGE-------DGKLGHGNRMSYD-----RPKLVEHLN 4186

Query: 161  PRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPG 220
              S V+  + G++       SG        ++  K        GD      P LV    G
Sbjct: 4187 GMS-VADIACGSAHSAAITASGHV------LTWGKGRYGRLGHGDSEDQLRPKLVEALLG 4239

Query: 221  VRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
             R   +A  +G   TL ++D   VW WG G  G+LG G      S    +P     Y  +
Sbjct: 4240 YRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGG-----SDGCKLP-----YKIE 4289

Query: 279  RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
              A L                  V  + CG + S  +T +GA+ T+G G + + G GS D
Sbjct: 4290 SLAGLG-----------------VVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVD 4332

Query: 339  DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
                P  V++L G +I  +A G  H +  S  G+VY +G N  GQLG G   A   PRL+
Sbjct: 4333 HVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLV 4392

Query: 399  DAPSLENVHSKSVSCGARHTAVIA 422
             A  L+  H   V+CG+ HT  ++
Sbjct: 4393 AA--LQGKHIVKVTCGSAHTLALS 4414



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 109/386 (28%), Positives = 152/386 (39%), Gaps = 73/386 (18%)

Query: 56   FAMAISDSRKLITWGSTDDL------GQSYV----TSGKHG-----EIPEPFPLPT-EAS 99
            F+  IS  R +   G +  L      G+ Y     T+G+ G      +P P  LP     
Sbjct: 3012 FSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLRQY 3071

Query: 100  IVKAAA---GWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLT 156
            +VK  A   G  H +A+T  G+V++WG  E        G L  G     D      +   
Sbjct: 3072 VVKKVAVHSGGKHALALTLDGKVFSWGEGE-------DGKLGHGNRTTLDKPRLVEALRA 3124

Query: 157  EQVSPRSQVSRSSGGTSSGTDGR--GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCL 214
            +++   +  S  S   SS  +    G GE G                  GD      P L
Sbjct: 3125 KKIRDVACGSSHSAAISSQGELYTWGLGEYGRL--------------GHGDNTTQLKPKL 3170

Query: 215  VTLNPGVRIATVAAGGR--HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIE 272
            VT   G R+  VA G R   TLAL++ G V+ WG G  G+LG G                
Sbjct: 3171 VTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG--------------- 3215

Query: 273  SSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQC 332
             S G D    + R S           G  V  I CG + S  +T AG + T+G G Y + 
Sbjct: 3216 -SEGSDTPHEIERLS-----------GIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRL 3263

Query: 333  GQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAE 392
            G G       P  +  L G ++  VA G  H + ++  G VYA+G N  GQ G+G     
Sbjct: 3264 GHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVN 3323

Query: 393  TLPRLLDAPSLENVHSKSVSCGARHT 418
              P L+    L+ V    V+CG+ H+
Sbjct: 3324 KKPALVIG--LDAVFVNRVACGSSHS 3347



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 116/238 (48%), Gaps = 45/238 (18%)

Query: 230 GRHTLALSDIGQVWGWGYGGEGQLGLG-SRIRMVSSPHPIPCIESSYGKDRSAALSRGSV 288
           GRH LA+      + WG G + +LG G +  R V +              + AAL +  V
Sbjct: 625 GRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPT--------------KIAALEQHCV 670

Query: 289 NSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS 348
            S              + CG  +SA IT  G LLT+G G Y + G G++DD   P  V +
Sbjct: 671 QS--------------VYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVA 716

Query: 349 LLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENV 406
           L    +  VA  +G  H++ ++S+G V+A+G   +G+LG G       P L++  SL  V
Sbjct: 717 LSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVE--SLPRV 774

Query: 407 HSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC-VPRNVA 463
             + V  G++ +  ++ +G+++ WG  K   LG   +++R      +++GC VPR V+
Sbjct: 775 --QRVFAGSQFSVALSSEGQLYTWG--KATCLG-HQLVER------SVQGCSVPRLVS 821



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 107/229 (46%), Gaps = 36/229 (15%)

Query: 242  VWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPG 299
            ++GWG+   GQLG   GSRI+      P PC                    E      P 
Sbjct: 4051 IYGWGHNHRGQLGGLEGSRIKT-----PTPC--------------------EALSLLRPV 4085

Query: 300  NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA- 358
                 +A G +    +T  G L   G+G  G+ G G +D    P  + SL  + ++ VA 
Sbjct: 4086 Q----LAGGEQSLFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAV 4141

Query: 359  -AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARH 417
             +G  H + ++++G+VYA+G  + G+LG G   +   P+L++   L  +    ++CG+ H
Sbjct: 4142 NSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVE--HLNGMSVADIACGSAH 4199

Query: 418  TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
            +A I   G V  WG  +YG+LG GD  D+  P  V  + G    ++ACG
Sbjct: 4200 SAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACG 4248



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 87/348 (25%), Positives = 135/348 (38%), Gaps = 66/348 (18%)

Query: 24   LPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDD--LGQSYVT 81
            LP + P+L   VV+         +     G   A+A++   K+ +WG  +D  LG    T
Sbjct: 3061 LPHQLPVLRQYVVK---------KVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRT 3111

Query: 82   SGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGT 141
            +     + E         I   A G +H  A++  GE+YTWG  E       +G L  G 
Sbjct: 3112 TLDKPRLVEAL---RAKKIRDVACGSSHSAAISSQGELYTWGLGE-------YGRLGHGD 3161

Query: 142  GLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQT 197
               +   +  ++    +V   +  SR +   +   DG     G G+ G       L +  
Sbjct: 3162 NTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFG------KLGRGG 3215

Query: 198  AESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS 257
            +E S +  E        +    G+ +  +  G + +LAL+  G+VW WG G   +LG G 
Sbjct: 3216 SEGSDTPHE--------IERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGG 3267

Query: 258  RIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITD 317
              + V  P PI                         G R  G  V  +A G  H   +TD
Sbjct: 3268 D-QHVRKPQPI------------------------GGLR--GRRVIHVAVGALHCLAVTD 3300

Query: 318  AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTI 365
            AG +  +G   +GQ G G+T     P  V  L  + +  VA G  H+I
Sbjct: 3301 AGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSI 3348



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 63/136 (46%)

Query: 307 CGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC 366
           C GRH   I       ++G G   + G G T     P  +++L    ++ V  G  ++  
Sbjct: 623 CEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAA 682

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           I+  G++  +G   + +LG G     +LP L+ A S   V   ++  G  H+  +  +G 
Sbjct: 683 ITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGL 742

Query: 427 VFCWGWNKYGQLGLGD 442
           VF WG   YG+LG G+
Sbjct: 743 VFAWGDGDYGKLGNGN 758



 Score = 47.8 bits (112), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 92/221 (41%), Gaps = 33/221 (14%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           G+ +  + P LV       +  VA  +G  H+LAL+  G V+ WG G  G+LG G+    
Sbjct: 703 GNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGN---C 759

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
             S  PI  +ES         L R                V+ +  G + S  ++  G L
Sbjct: 760 NGSLQPI-LVES---------LPR----------------VQRVFAGSQFSVALSSEGQL 793

Query: 322 LTFGWG--LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN 379
            T+G    L  Q  + S      P  VSSL   +I  VA  + H + +SS G+V+ +G N
Sbjct: 794 YTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRN 853

Query: 380 QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
              Q+      +E L R     SL    +  ++C +  + V
Sbjct: 854 DSQQICPASVSSEPLLRTPILVSLPTFPASGIACTSAQSLV 894



 Score = 46.6 bits (109), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 81/159 (50%), Gaps = 13/159 (8%)

Query: 319  GALLTFGWGL--YGQCG--QGSTDDELSP-NCVSSLLGIQIEGVAAGLWHTICISSDGDV 373
            GA   +GWG    GQ G  +GS     +P   +S L  +Q+ G    L+    ++ DG +
Sbjct: 4047 GASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLF---AVTPDGKL 4103

Query: 374  YAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSC--GARHTAVIADDGKVFCWG 431
            +A G    G+LG GG  +  +P LL   SL++V  K V+   G +H   +  +G+V+ WG
Sbjct: 4104 FATGYGSGGRLGVGGSDSWAIPTLLG--SLQHVFVKKVAVNSGGKHCLALTTEGEVYAWG 4161

Query: 432  WNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHT 469
              + G+LG G+ +  + P  V  + G    ++ACG  H+
Sbjct: 4162 EGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHS 4200



 Score = 45.1 bits (105), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 1/73 (1%)

Query: 52  GGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHG-EIPEPFPLPTEASIVKAAAGWAHC 110
            G  F++A+S   +L TWG    LG   V     G  +P          IV  A   AHC
Sbjct: 779 AGSQFSVALSSEGQLYTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHC 838

Query: 111 VAVTEGGEVYTWG 123
           +A++  GEV+ WG
Sbjct: 839 LALSSSGEVFGWG 851



 Score = 43.1 bits (100), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 81/208 (38%), Gaps = 32/208 (15%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGE-----IPEPFPLPTEASIVKAA--A 105
           GC ++ AI+    L+TWG       +Y   G HG      +P      ++  +V  A  +
Sbjct: 676 GCSYSAAITCGGNLLTWGRG-----TYARLG-HGNSDDRSLPTLVVALSDHMVVDVALGS 729

Query: 106 GWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQV 165
           G AH +A+T  G V+ WG  +       +G L  G            S     V    +V
Sbjct: 730 GDAHSLALTSEGLVFAWGDGD-------YGKLGNGNC--------NGSLQPILVESLPRV 774

Query: 166 SRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIAT 225
            R   G+         G+  +  +   L  Q  E S  G     + P LV+     RI  
Sbjct: 775 QRVFAGSQFSVALSSEGQLYTWGKATCLGHQLVERSVQG----CSVPRLVSSLQHKRIVD 830

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQL 253
           VA    H LALS  G+V+GWG     Q+
Sbjct: 831 VAVSVAHCLALSSSGEVFGWGRNDSQQI 858


>gi|383865452|ref|XP_003708187.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Megachile
            rotundata]
          Length = 4755

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 88/303 (29%), Positives = 132/303 (43%), Gaps = 80/303 (26%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GG+H LALS  G V+ WG G +G+LG G+R+              SY  DR 
Sbjct: 3983 VKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRL--------------SY--DRP 4026

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
              +             + G  +  +ACGG HSA IT AG L T+G G YG+ G G ++D+
Sbjct: 4027 KLIEE-----------LLGTEIVDVACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQ 4075

Query: 341  LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L+P  V +L   ++  VA  +G   T+C++ D +V+++G   +G+LG GG     +P  +
Sbjct: 4076 LTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPMKI 4135

Query: 399  DA--------------------------------------------------PSLENVHS 408
            ++                                                   +L+    
Sbjct: 4136 ESLAGLGVIKVECGSQFSVALTRSGSIYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKI 4195

Query: 409  KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWW 467
             S++ G+ H    +D G+VF WG N  GQLG G       P  V  ++G     VACG  
Sbjct: 4196 ISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTCALQRPRLVHALQGKKITRVACGSA 4255

Query: 468  HTL 470
            HTL
Sbjct: 4256 HTL 4258



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 88/303 (29%), Positives = 131/303 (43%), Gaps = 80/303 (26%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            ++   V +GG+H LAL+  G+V+ WG G +G+LG G+    +  P  I  ++S   +D  
Sbjct: 2996 IKKVAVHSGGKHALALTQDGRVFSWGEGEDGKLGHGN-CSSLDKPRLIESLKSKRIRD-- 3052

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                    +ACG  HSA IT +G L T+G G YG+ G G T+ +
Sbjct: 3053 ------------------------VACGSGHSAAITSSGELYTWGLGEYGRLGHGDTNTQ 3088

Query: 341  LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V SL+G ++  VA G     T+ +++DG VY++G   FG+LG GG      P L+
Sbjct: 3089 LKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGGSDGCYTPLLV 3148

Query: 399  D----------------------------------------------APSL-ENVHSKSV 411
            D                                               P+L E +  K V
Sbjct: 3149 DRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKV 3208

Query: 412  ---SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWW 467
               + GA H   + D G+V+ WG N +GQ G G  I    PS V  ++      V+CG  
Sbjct: 3209 IHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGSTIVNKKPSLVHELDDARVNRVSCGSS 3268

Query: 468  HTL 470
            H++
Sbjct: 3269 HSI 3271



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 134/289 (46%), Gaps = 34/289 (11%)

Query: 211  FPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPC 270
             P L      +R   +  G +   A++  G+V+  GYG  G+LG+G     V  P  +  
Sbjct: 3919 LPVLCESLSALRPVQLTGGEQTLFAVTADGKVYATGYGAVGRLGIGG-TDSVMMPTLLES 3977

Query: 271  IESSY---------GKDRSAALSRGSVNSEGPG------------FRVP-------GNYV 302
            I+  +         GK   A  S G V S G G            +  P       G  +
Sbjct: 3978 IQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEI 4037

Query: 303  KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA--AG 360
              +ACGG HSA IT AG L T+G G YG+ G G ++D+L+P  V +L   ++  VA  +G
Sbjct: 4038 VDVACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSG 4097

Query: 361  LWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
               T+C++ D +V+++G   +G+LG GG     +P  ++  SL  +    V CG++ +  
Sbjct: 4098 DAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIE--SLAGLGVIKVECGSQFSVA 4155

Query: 421  IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWH 468
            +   G ++ WG   Y +LG G       P +V  ++G    ++A G  H
Sbjct: 4156 LTRSGSIYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLH 4204



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 124/255 (48%), Gaps = 34/255 (13%)

Query: 223 IATVAA--GGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           +A +A+   G+H LAL++   V+ WG G  G+LG G R      P     IES   K+  
Sbjct: 506 VAMIASHPDGKHYLALTEDSSVYSWGNGDGGRLGHGDRT-WYEEPK---LIESLVDKN-- 559

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                +  IACG  +SA ++  G L T+G G YG+ G G++DD 
Sbjct: 560 ---------------------ITFIACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDDV 598

Query: 341 LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           + P  VS+L G  I  VA  +G   T+C+++ G V+++G   +G+LG GG      P+++
Sbjct: 599 MVPTLVSALNGHMIVYVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGCNGSKTPKIV 658

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGC 457
           D   L +++   V CG + +A +   G+V+ WG  +  +LG G+      P  +  ++  
Sbjct: 659 D--KLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEAYRLGHGNEEHVRYPKAIEALKTK 716

Query: 458 VPRNVACGWWHTLLL 472
             + +  G  H L L
Sbjct: 717 KVKELCVGSLHVLAL 731



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 141/339 (41%), Gaps = 62/339 (18%)

Query: 89   PEPFPLPTEASIVKAA--AGWAHCVAVTEGGEVYTWGWKECVPSGRV-FGDLSTGTGLDK 145
            P+P P  ++  I K A  +G  H +A+T+ G V++WG  E    G++  G+ S+   LDK
Sbjct: 2985 PKPIPFLSQYVIKKVAVHSGGKHALALTQDGRVFSWGEGE---DGKLGHGNCSS---LDK 3038

Query: 146  -DVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGR-GSGEEGSKRRRISLAKQTAESSSS 203
              + E   S     V+  S    S+  TSSG     G GE G                  
Sbjct: 3039 PRLIESLKSKRIRDVACGS--GHSAAITSSGELYTWGLGEYGRL--------------GH 3082

Query: 204  GDENLSAFPCLVTLNPGVRIATVAAGGR--HTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
            GD N    P LV    G R+  VA G R   T+AL+  G V+ WG G  G+LG G     
Sbjct: 3083 GDTNTQLKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRG----- 3137

Query: 262  VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITDAG 319
                                    GS     P    R+ G  V  I CG + S  +T  G
Sbjct: 3138 ------------------------GSDGCYTPLLVDRLNGLGVVQIECGAQFSLALTKYG 3173

Query: 320  ALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN 379
             + T+G G Y + G G+      P  V  L G ++  VA G  H + ++  G VYA+G N
Sbjct: 3174 EVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVIHVAVGALHCLAVTDTGQVYAWGDN 3233

Query: 380  QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
              GQ G G       P L+    L++     VSCG+ H+
Sbjct: 3234 DHGQQGNGSTIVNKKPSLVH--ELDDARVNRVSCGSSHS 3270



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 96/326 (29%), Positives = 135/326 (41%), Gaps = 62/326 (19%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFL-TEQV 159
            V   +G  HC+A++  G VY+WG  +        G L  G  L  D  +     L TE V
Sbjct: 3986 VAVNSGGKHCLALSSEGHVYSWGEGD-------DGKLGHGNRLSYDRPKLIEELLGTEIV 4038

Query: 160  SPRSQVSRSSGGTSSG---TDGRGS-GEEGSKRRRISLAKQTAESSSSGDENLSAFPCLV 215
                    S+  TS+G   T G+G  G  G                  GD      P LV
Sbjct: 4039 DVACGGHHSAAITSAGWLYTWGKGRYGRLGH-----------------GDSEDQLTPKLV 4081

Query: 216  TLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPC-IE 272
                  ++  VA  +G   TL ++D   VW WG G  G+LG G      S    +P  IE
Sbjct: 4082 EALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGG-----SDGCKVPMKIE 4136

Query: 273  SSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQC 332
            S                       + G  V  + CG + S  +T +G++ T+G G Y + 
Sbjct: 4137 S-----------------------LAGLGVIKVECGSQFSVALTRSGSIYTWGKGDYHRL 4173

Query: 333  GQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAE 392
            G G+ D    P  V++L G +I  +A G  H +  S  G+V+ +G N  GQLG G   A 
Sbjct: 4174 GHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTCAL 4233

Query: 393  TLPRLLDAPSLENVHSKSVSCGARHT 418
              PRL+ A  L+      V+CG+ HT
Sbjct: 4234 QRPRLVHA--LQGKKITRVACGSAHT 4257



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 103/218 (47%), Gaps = 29/218 (13%)

Query: 226  VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
            +A G +    +S  G+++  G G  G+LGLG        P PIP + S Y       + +
Sbjct: 2947 IAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDGN-ACEPKPIPFL-SQY------VIKK 2998

Query: 286  GSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNC 345
             +V+S                 GG+H+  +T  G + ++G G  G+ G G+      P  
Sbjct: 2999 VAVHS-----------------GGKHALALTQDGRVFSWGEGEDGKLGHGNCSSLDKPRL 3041

Query: 346  VSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLEN 405
            + SL   +I  VA G  H+  I+S G++Y +G  ++G+LG G    +  P+L+   SL  
Sbjct: 3042 IESLKSKRIRDVACGSGHSAAITSSGELYTWGLGEYGRLGHGDTNTQLKPKLVQ--SLVG 3099

Query: 406  VHSKSVSCGAR--HTAVIADDGKVFCWGWNKYGQLGLG 441
                 V+CG+R   T  +  DG V+ WG   +G+LG G
Sbjct: 3100 QRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRG 3137



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 111/239 (46%), Gaps = 38/239 (15%)

Query: 233  TLALSDIGQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNS 290
            TL+    G ++GWG+   GQLG   G+++++     P+ C   S    R   L+      
Sbjct: 3889 TLSWDGSGAIYGWGHNHRGQLGGLEGAKVKL-----PVLC--ESLSALRPVQLT------ 3935

Query: 291  EGPGFRVPGNYVKGIACGGRHSAV-ITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSL 349
                             GG  +   +T  G +   G+G  G+ G G TD  + P  + S+
Sbjct: 3936 -----------------GGEQTLFAVTADGKVYATGYGAVGRLGIGGTDSVMMPTLLESI 3978

Query: 350  LGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVH 407
              + ++ VA  +G  H + +SS+G VY++G    G+LG G   +   P+L++   L    
Sbjct: 3979 QHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLIE--ELLGTE 4036

Query: 408  SKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
               V+CG  H+A I   G ++ WG  +YG+LG GD  D+  P  V  ++     +VACG
Sbjct: 4037 IVDVACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACG 4095



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 86/164 (52%), Gaps = 5/164 (3%)

Query: 305  IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA--AGLW 362
            IA G +   V++  G L   G G  G+ G G   +   P  +  L    I+ VA  +G  
Sbjct: 2947 IAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDGNACEPKPIPFLSQYVIKKVAVHSGGK 3006

Query: 363  HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIA 422
            H + ++ DG V+++G  + G+LG G   +   PRL++  SL++   + V+CG+ H+A I 
Sbjct: 3007 HALALTQDGRVFSWGEGEDGKLGHGNCSSLDKPRLIE--SLKSKRIRDVACGSGHSAAIT 3064

Query: 423  DDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
              G+++ WG  +YG+LG GD   +  P  V ++ G     VACG
Sbjct: 3065 SSGELYTWGLGEYGRLGHGDTNTQLKPKLVQSLVGQRVIQVACG 3108



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 87/344 (25%), Positives = 134/344 (38%), Gaps = 60/344 (17%)

Query: 25   PQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDD--LGQSYVTS 82
            P+  P LS  V++         +     G   A+A++   ++ +WG  +D  LG    +S
Sbjct: 2985 PKPIPFLSQYVIK---------KVAVHSGGKHALALTQDGRVFSWGEGEDGKLGHGNCSS 3035

Query: 83   GKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTG 142
                 + E         I   A G  H  A+T  GE+YTWG  E    GR  G   T T 
Sbjct: 3036 LDKPRLIESL---KSKRIRDVACGSGHSAAITSSGELYTWGLGE---YGR-LGHGDTNTQ 3088

Query: 143  LDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGR-GSGEEGSKRRRISLAKQTAESS 201
            L   + +        QV+  S+ +++   T+ G+    G G+ G   R            
Sbjct: 3089 LKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGR------------ 3136

Query: 202  SSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
              G  +    P LV    G+ +  +  G + +LAL+  G+VW WG G   +LG G+    
Sbjct: 3137 --GGSDGCYTPLLVDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGN---- 3190

Query: 262  VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
                H +          R   L  G          + G  V  +A G  H   +TD G +
Sbjct: 3191 ---DHHV----------RKPTLVEG----------LRGKKVIHVAVGALHCLAVTDTGQV 3227

Query: 322  LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTI 365
              +G   +GQ G GST     P+ V  L   ++  V+ G  H+I
Sbjct: 3228 YAWGDNDHGQQGNGSTIVNKKPSLVHELDDARVNRVSCGSSHSI 3271



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 89/208 (42%), Gaps = 27/208 (12%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMV- 262
           GD      P L+       I  +A G  ++ ALS  G+++ WG G  G+LG G+   ++ 
Sbjct: 541 GDRTWYEEPKLIESLVDKNITFIACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDDVMV 600

Query: 263 ------------------SSPHPIPCIESS-----YGKDRSAALSRGSVN-SEGPGF--R 296
                             S      C+ +S     +G      L RG  N S+ P    +
Sbjct: 601 PTLVSALNGHMIVYVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGCNGSKTPKIVDK 660

Query: 297 VPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG 356
           +    V  + CGG+ SA +T  G + T+G G   + G G+ +    P  + +L   +++ 
Sbjct: 661 LLDINVAKVYCGGQFSAALTAYGEVYTWGKGEAYRLGHGNEEHVRYPKAIEALKTKKVKE 720

Query: 357 VAAGLWHTICISSDGDVYAFGGNQFGQL 384
           +  G  H + ++ D  VY +G N +GQ+
Sbjct: 721 LCVGSLHVLALTEDQLVYGWGRNDYGQI 748



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 66/125 (52%), Gaps = 4/125 (3%)

Query: 346  VSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLEN 405
            +S+L  +Q+ G    L+    +++DG VYA G    G+LG GG  +  +P LL++     
Sbjct: 3926 LSALRPVQLTGGEQTLF---AVTADGKVYATGYGAVGRLGIGGTDSVMMPTLLESIQHVF 3982

Query: 406  VHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVAC 464
            V   +V+ G +H   ++ +G V+ WG    G+LG G+ +  + P  +  + G    +VAC
Sbjct: 3983 VKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDVAC 4042

Query: 465  GWWHT 469
            G  H+
Sbjct: 4043 GGHHS 4047



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 61/128 (47%), Gaps = 1/128 (0%)

Query: 343  PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPS 402
            P    SL  ++   +A G      +S +G +YA G    G+LG G D     P+ +   S
Sbjct: 2933 PVYSESLSKLKPVHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDGNACEPKPIPFLS 2992

Query: 403  LENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRN 461
               +   +V  G +H   +  DG+VF WG  + G+LG G+    + P  + +++    R+
Sbjct: 2993 QYVIKKVAVHSGGKHALALTQDGRVFSWGEGEDGKLGHGNCSSLDKPRLIESLKSKRIRD 3052

Query: 462  VACGWWHT 469
            VACG  H+
Sbjct: 3053 VACGSGHS 3060



 Score = 40.4 bits (93), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 5/73 (6%)

Query: 53   GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
            G  F++A++ S  + TWG  D   LG     +  H   P          I+  A G  HC
Sbjct: 4149 GSQFSVALTRSGSIYTWGKGDYHRLGHG---TDDHVRRPRKVAALQGKKIISIATGSLHC 4205

Query: 111  VAVTEGGEVYTWG 123
            VA ++ GEV+TWG
Sbjct: 4206 VACSDKGEVFTWG 4218


>gi|428172054|gb|EKX40966.1| hypothetical protein GUITHDRAFT_46944, partial [Guillardia theta
           CCMP2712]
          Length = 355

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 119/256 (46%), Gaps = 35/256 (13%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
            + ++ AG  H+  +++ G V+ WG G EGQLG      +   PH +P +E+        
Sbjct: 37  NVRSIGAGKSHSAVIAEDGDVYTWGRGWEGQLGHDVVTEIELEPHIVPKMEN-------- 88

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL 341
              RGS                 +ACG  H+ V+TD G + T+G    GQ G G      
Sbjct: 89  ---RGS---------------SAVACGRNHTVVVTDNGLIYTWGENKAGQLGTGDLKSSN 130

Query: 342 SPNCVSSLLGI-QIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
           SP  + S L +  +  +A G +HT+ I  +G ++++G NQ GQLG G  +    P     
Sbjct: 131 SPVLIDSALNLPSVLSIACGEFHTVAICIEGTIWSWGRNQCGQLGHGNTKTCYFPT--QV 188

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGD----VIDRNIPSQVTIEG 456
             +        +CG +HT V+ D  K++ WG N YGQLGL      V+  +I   +   G
Sbjct: 189 VGMAKKICIRAACGGQHTLVLTDANKIYAWGSNAYGQLGLNRSDKAVLQPDIVDHLRRSG 248

Query: 457 CVPRNVACGWWHTLLL 472
               +V CG+ H++ L
Sbjct: 249 AC--HVLCGYSHSMAL 262



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 80/233 (34%), Positives = 114/233 (48%), Gaps = 26/233 (11%)

Query: 242 VWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNY 301
           V+ WG    GQLGLG    +     P+P    S     S  L+R +V S           
Sbjct: 1   VYSWGKNKYGQLGLGHTNNV-----PLPTGILSL----SDPLNRKNVRS----------- 40

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDELSPNCVSSLLGIQIEGVAAG 360
              I  G  HSAVI + G + T+G G  GQ G    T+ EL P+ V  +       VA G
Sbjct: 41  ---IGAGKSHSAVIAEDGDVYTWGRGWEGQLGHDVVTEIELEPHIVPKMENRGSSAVACG 97

Query: 361 LWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
             HT+ ++ +G +Y +G N+ GQLGTG  ++   P L+D+ +L      S++CG  HT  
Sbjct: 98  RNHTVVVTDNGLIYTWGENKAGQLGTGDLKSSNSPVLIDS-ALNLPSVLSIACGEFHTVA 156

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
           I  +G ++ WG N+ GQLG G+      P+QV  +   +    ACG  HTL+L
Sbjct: 157 ICIEGTIWSWGRNQCGQLGHGNTKTCYFPTQVVGMAKKICIRAACGGQHTLVL 209



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 96/385 (24%), Positives = 157/385 (40%), Gaps = 74/385 (19%)

Query: 92  FPLPT----------EASIVKAAAGWAHCVAVTEGGEVYTWG--WKECVPSGRVFGDLST 139
            PLPT            ++    AG +H   + E G+VYTWG  W+     G++  D+ T
Sbjct: 20  VPLPTGILSLSDPLNRKNVRSIGAGKSHSAVIAEDGDVYTWGRGWE-----GQLGHDVVT 74

Query: 140 GTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRI-SLAKQTA 198
              L+  +  +  +                 G+S+   GR      +    I +  +  A
Sbjct: 75  EIELEPHIVPKMENR----------------GSSAVACGRNHTVVVTDNGLIYTWGENKA 118

Query: 199 ESSSSGDENLSAFPCLVTLNPGV-RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS 257
               +GD   S  P L+     +  + ++A G  HT+A+   G +W WG    GQLG G+
Sbjct: 119 GQLGTGDLKSSNSPVLIDSALNLPSVLSIACGEFHTVAICIEGTIWSWGRNQCGQLGHGN 178

Query: 258 RIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITD 317
                         ++ Y   +   +++                    ACGG+H+ V+TD
Sbjct: 179 -------------TKTCYFPTQVVGMAK--------------KICIRAACGGQHTLVLTD 211

Query: 318 AGALLTFGWGLYGQCGQGSTDDE-LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAF 376
           A  +  +G   YGQ G   +D   L P+ V  L       V  G  H++ +  +  +Y +
Sbjct: 212 ANKIYAWGSNAYGQLGLNRSDKAVLQPDIVDHLRRSGACHVLCGYSHSMALMKNEQIYTW 271

Query: 377 GGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARH-TAVIADDGK--------V 427
           G N  GQLG G      +P L+ A  L +V  + ++CG  H  A +AD+ +        V
Sbjct: 272 GRNDCGQLGLGHYTHSPVPELVTA--LRSVRVQQIACGYDHCVAFVADEVEPGMPPLEHV 329

Query: 428 FCWGWNKYGQLGLGDVIDRNIPSQV 452
           + WG  + GQLG  +++ R  P  V
Sbjct: 330 YSWGRGEEGQLGHNELLSRCTPRIV 354



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/164 (35%), Positives = 86/164 (52%), Gaps = 11/164 (6%)

Query: 323 TFGWGL--YGQCGQGSTDDELSPNCVSSLLG----IQIEGVAAGLWHTICISSDGDVYAF 376
            + WG   YGQ G G T++   P  + SL        +  + AG  H+  I+ DGDVY +
Sbjct: 1   VYSWGKNKYGQLGLGHTNNVPLPTGILSLSDPLNRKNVRSIGAGKSHSAVIAEDGDVYTW 60

Query: 377 GGNQFGQLGTGG-DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKY 435
           G    GQLG     + E  P ++  P +EN  S +V+CG  HT V+ D+G ++ WG NK 
Sbjct: 61  GRGWEGQLGHDVVTEIELEPHIV--PKMENRGSSAVACGRNHTVVVTDNGLIYTWGENKA 118

Query: 436 GQLGLGDVIDRNIPSQVTIEGCVPR--NVACGWWHTLLLAVPPT 477
           GQLG GD+   N P  +     +P   ++ACG +HT+ + +  T
Sbjct: 119 GQLGTGDLKSSNSPVLIDSALNLPSVLSIACGEFHTVAICIEGT 162



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 88/364 (24%), Positives = 130/364 (35%), Gaps = 65/364 (17%)

Query: 51  GGGCGFAMAISDSRKLITWGS--TDDLGQSYVTSGKHGEI---PEPFPLPTEASIVKAAA 105
           G G   +  I++   + TWG      LG   VT     EI   P   P          A 
Sbjct: 42  GAGKSHSAVIAEDGDVYTWGRGWEGQLGHDVVT-----EIELEPHIVPKMENRGSSAVAC 96

Query: 106 GWAHCVAVTEGGEVYTWGWKECVPSGRVFGDL-STGTGLDKDVFERQSSFLTEQVSPRSQ 164
           G  H V VT+ G +YTWG  +    G   GDL S+ + +  D      S L+        
Sbjct: 97  GRNHTVVVTDNGLIYTWGENKAGQLGT--GDLKSSNSPVLIDSALNLPSVLSIACGEFHT 154

Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           V+    GT         G+ G                  G+     FP  V         
Sbjct: 155 VAICIEGTIWSWGRNQCGQLGH-----------------GNTKTCYFPTQVVGMAKKICI 197

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
             A GG+HTL L+D  +++ WG    GQLGL    + V  P  +  +       RS A  
Sbjct: 198 RAACGGQHTLVLTDANKIYAWGSNAYGQLGLNRSDKAVLQPDIVDHLR------RSGACH 251

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN 344
                               + CG  HS  +     + T+G    GQ G G       P 
Sbjct: 252 --------------------VLCGYSHSMALMKNEQIYTWGRNDCGQLGLGHYTHSPVPE 291

Query: 345 CVSSLLGIQIEGVAAGLWHTICISSD---------GDVYAFGGNQFGQLGTGGDQAETLP 395
            V++L  ++++ +A G  H +   +D           VY++G  + GQLG     +   P
Sbjct: 292 LVTALRSVRVQQIACGYDHCVAFVADEVEPGMPPLEHVYSWGRGEEGQLGHNELLSRCTP 351

Query: 396 RLLD 399
           R+++
Sbjct: 352 RIVE 355


>gi|390352695|ref|XP_003727958.1| PREDICTED: uncharacterized protein LOC100887866 [Strongylocentrotus
            purpuratus]
          Length = 1139

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 68/213 (31%), Positives = 107/213 (50%), Gaps = 30/213 (14%)

Query: 220  GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
            G+ +  VA G  HT+A++  G+++ WG    GQLG+G R  + S P  +  +        
Sbjct: 827  GIHVRAVACGKEHTMAVTQEGKLYSWGSSSYGQLGVGDR-NVHSRPVAVEALS------- 878

Query: 280  SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDD 339
                               G     +ACG  H+ V+T    L +FGWG++GQ G G  +D
Sbjct: 879  -------------------GQRCLSVACGQLHTLVLTQDQRLWSFGWGVHGQLGHGDVED 919

Query: 340  ELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLD 399
            ++ P  V+ L    I G++AG  H+  +++DG V+ FG + FGQLGTG     T+P  L 
Sbjct: 920  QILPKLVNQLSKCAIVGISAGYAHSGALTNDGQVWMFGSSSFGQLGTGSIGKSTVPVRLK 979

Query: 400  APSLENVHSKSVSCG-ARHTAVIADDGKVFCWG 431
            A  L + H   ++CG   + A+ ++  KV+ WG
Sbjct: 980  A--LSSHHVSILTCGYYSNIAITSNPQKVYTWG 1010



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 98/182 (53%), Gaps = 11/182 (6%)

Query: 294 GFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG---STDDELSPNCVSSLL 350
           G  +P   V  +ACG  H+A++ + G + T+G    G+ GQG   S D    P  V +L 
Sbjct: 768 GLLLPTQNV--LACGQDHAAIVAN-GDVYTWGRAHEGRLGQGDIMSLDGRAPPLRVETLH 824

Query: 351 --GIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHS 408
             GI +  VA G  HT+ ++ +G +Y++G + +GQLG G     + P  ++A  L     
Sbjct: 825 MHGIHVRAVACGKEHTMAVTQEGKLYSWGSSSYGQLGVGDRNVHSRPVAVEA--LSGQRC 882

Query: 409 KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWW 467
            SV+CG  HT V+  D +++ +GW  +GQLG GDV D+ +P  V  +  C    ++ G+ 
Sbjct: 883 LSVACGQLHTLVLTQDQRLWSFGWGVHGQLGHGDVEDQILPKLVNQLSKCAIVGISAGYA 942

Query: 468 HT 469
           H+
Sbjct: 943 HS 944



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/275 (26%), Positives = 114/275 (41%), Gaps = 57/275 (20%)

Query: 204  GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
            GD N+ + P  V    G R  +VA G  HTL L+   ++W +G+G  GQLG G       
Sbjct: 863  GDRNVHSRPVAVEALSGQRCLSVACGQLHTLVLTQDQRLWSFGWGVHGQLGHGD------ 916

Query: 264  SPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLT 323
                   +E          LS+ +              + GI+ G  HS  +T+ G +  
Sbjct: 917  -------VEDQILPKLVNQLSKCA--------------IVGISAGYAHSGALTNDGQVWM 955

Query: 324  FGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD-GDVYAFGGN--- 379
            FG   +GQ G GS      P  + +L    +  +  G +  I I+S+   VY +G +   
Sbjct: 956  FGSSSFGQLGTGSIGKSTVPVRLKALSSHHVSILTCGYYSNIAITSNPQKVYTWGKSPLE 1015

Query: 380  --QFGQLGTGGDQA----------ETLPRLLDAPSLENVH-------------SKSVSCG 414
              Q  QL     Q+          +T+ RL   P LEN H              K ++  
Sbjct: 1016 LRQALQLARKRHQSSRYSNPDPHHQTVTRLPSLP-LENQHLLPSLVPTNIQAPIKKMTMS 1074

Query: 415  ARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIP 449
              H  ++   G ++ WG N+ GQLG+G+ + +++P
Sbjct: 1075 GNHYLMLTTVGDLYSWGSNEAGQLGMGNRVSQSVP 1109



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/115 (36%), Positives = 66/115 (57%), Gaps = 14/115 (12%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQA---ETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
           I ++GDVY +G    G+LG G   +      P  ++   +  +H ++V+CG  HT  +  
Sbjct: 786 IVANGDVYTWGRAHEGRLGQGDIMSLDGRAPPLRVETLHMHGIHVRAVACGKEHTMAVTQ 845

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQ-VTIEG-----CVPRNVACGWWHTLLL 472
           +GK++ WG + YGQLG+G   DRN+ S+ V +E      C+  +VACG  HTL+L
Sbjct: 846 EGKLYSWGSSSYGQLGVG---DRNVHSRPVAVEALSGQRCL--SVACGQLHTLVL 895



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 36/221 (16%)

Query: 88   IPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDV 147
            +P+     ++ +IV  +AG+AH  A+T  G+V+ +G          FG L TG+     V
Sbjct: 922  LPKLVNQLSKCAIVGISAGYAHSGALTNDGQVWMFGSSS-------FGQLGTGSIGKSTV 974

Query: 148  FERQSSFLTEQVSP-----RSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSS 202
              R  +  +  VS       S ++ +S      T G+   E    R+ + LA++  +SS 
Sbjct: 975  PVRLKALSSHHVSILTCGYYSNIAITSNPQKVYTWGKSPLE---LRQALQLARKRHQSSR 1031

Query: 203  SGD----------------ENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWG 246
              +                EN    P LV  N    I  +   G H L L+ +G ++ WG
Sbjct: 1032 YSNPDPHHQTVTRLPSLPLENQHLLPSLVPTNIQAPIKKMTMSGNHYLMLTTVGDLYSWG 1091

Query: 247  YGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGS 287
                GQLG+G+R+        +P + +    D+  A++ GS
Sbjct: 1092 SNEAGQLGMGNRV-----SQSVPVLINRSRDDQFVAVAAGS 1127


>gi|351698259|gb|EHB01178.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Heterocephalus
            glaber]
          Length = 3493

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 90/305 (29%), Positives = 130/305 (42%), Gaps = 86/305 (28%)

Query: 232  HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
            H++AL++ G+V+ WG G  G+LG G+  R    P  I  ++                   
Sbjct: 2718 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQ------------------- 2757

Query: 292  GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                   G  V  ++CG +HSAV+T  G L TFG G YG+ G G+T ++  P  V++L G
Sbjct: 2758 -------GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 2810

Query: 352  IQI-------EGVAAGLWHTICISSDGD-VYAFGGNQFGQLGTGGDQAETLPRLLDA--- 400
             QI         VA GL HT+ +S+DG  V+AFG   +G+LG G   A++ P+ +D    
Sbjct: 2811 YQIGQAWNKSYSVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCG 2870

Query: 401  -----------------------------------------------PSLENVHSKSVSC 413
                                                           P L  V  + V+ 
Sbjct: 2871 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAV 2930

Query: 414  GARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACGWWHTLLL 472
            GA HT  +A  G V+ WG N  GQLGLG       P+ VT+ +G   R ++ G  H+   
Sbjct: 2931 GAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAW 2990

Query: 473  AVPPT 477
              PP 
Sbjct: 2991 TAPPV 2995



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 106/207 (51%), Gaps = 13/207 (6%)

Query: 275  YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
            +G  R   L+    N   P      +  + + CG   + VI   G +L  G G YG+ GQ
Sbjct: 2627 WGAGRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQ 2686

Query: 335  GSTDDELSPNCVSSLLGIQIEGVAAGLW---HTICISSDGDVYAFGGNQFGQLGTGGDQA 391
            G++DD      +S+L G  +  +        H++ ++  G+V+++G   +G+LG G    
Sbjct: 2687 GNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDR 2746

Query: 392  ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
            +  PR ++A   E V    +SCG +H+AV+  DGK+F +G   YG+LGLG+  ++ +P +
Sbjct: 2747 QRRPRQIEALQGEEV--VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPER 2804

Query: 452  VT-IEGC-------VPRNVACGWWHTL 470
            VT +EG           +VACG  HTL
Sbjct: 2805 VTALEGYQIGQAWNKSYSVACGLNHTL 2831



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 112/400 (28%), Positives = 165/400 (41%), Gaps = 82/400 (20%)

Query: 41   TVGSAWRDVCGGGCGFAMAISD--------SRKLITWGSTDDLGQSYVTSGKHGEIPEPF 92
            +   A + +CG  C F +  +         S   +  G++DDL    V S   G +    
Sbjct: 2650 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVV--- 2706

Query: 93   PLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQS 152
                   +V +     H +A+TE GEV++WG  +       +G L  G   D+    RQ 
Sbjct: 2707 -----TQLVTSCGSDGHSMALTESGEVFSWGDGD-------YGKLGHGNS-DRQRRPRQI 2753

Query: 153  SFLT-EQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDEN 207
              L  E+V   S   + S   +S  DG+    G+G+ G    R+ L          G+ +
Sbjct: 2754 EALQGEEVVQMSCGFKHSAVVTS--DGKLFTFGNGDYG----RLGL----------GNTS 2797

Query: 208  LSAFPCLVTLNPGVRIA-------TVAAGGRHTLALS-DIGQVWGWGYGGEGQLGLGSRI 259
                P  VT   G +I        +VA G  HTLA+S D   VW +G G  G+LGLG+  
Sbjct: 2798 NKKLPERVTALEGYQIGQAWNKSYSVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNST 2857

Query: 260  RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAG 319
               SSP  +  +                           G  +K +ACG + S  +T  G
Sbjct: 2858 AK-SSPQKVDVL--------------------------CGIGIKKVACGTQFSVALTKDG 2890

Query: 320  ALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN 379
             + TFG        +G   +   P  V  L G+ IE VA G  HT+ ++S GDVYA+G N
Sbjct: 2891 HVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSN 2950

Query: 380  QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
              GQLG G       P L+     +N+  + +S G  H+A
Sbjct: 2951 SEGQLGLGHTNHVREPTLVTVLQGKNI--RQISAGRCHSA 2988


>gi|327268361|ref|XP_003218966.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
           [Anolis carolinensis]
          Length = 788

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 89/280 (31%), Positives = 130/280 (46%), Gaps = 47/280 (16%)

Query: 206 ENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSP 265
           E  S F  +       +I  +AAG   +  L++ GQ+  WG   EGQ+GLG +   VS P
Sbjct: 125 EERSTFHLISFFTKQHKIKQLAAGSYTSAVLTEDGQLVMWGDNSEGQIGLGDKA-YVSVP 183

Query: 266 HPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFG 325
           H +                              G  V  I+CG  HSA+IT  G L TFG
Sbjct: 184 HQVDI----------------------------GKPVSCISCGYYHSALITQDGELYTFG 215

Query: 326 WGLYGQCGQG--STDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQ 383
               G+ G       +   P  VS + G ++  VA G  HT+ ++ +GDVY FG  Q+GQ
Sbjct: 216 EPENGKLGLSPKQLKNHKLPQLVSGISG-KVSKVACGGGHTVVLA-EGDVYTFGLGQYGQ 273

Query: 384 LGTGGDQAET-LPRLLDAPSLENV-HSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
           LG G    ET  P+ +D      + H   ++CG  HTA+I ++G ++ +G  ++G+LGLG
Sbjct: 274 LGHGTFVFETSEPKTVDHLGKHKICH---IACGENHTALITENGLMYTFGDGRHGKLGLG 330

Query: 442 DVIDRNIPSQVTIEGC------VPRNVACGWWHTLLLAVP 475
              + N  +Q     C      +  +VACG  H L+ A P
Sbjct: 331 ---EENYTNQFVPTLCSNFLRFIVHSVACGGCHMLVFASP 367



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 60/169 (35%), Positives = 97/169 (57%), Gaps = 2/169 (1%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           I+CG  H++V+T+ G L  FG   +GQ G GS +    P CV +L   +++  A G  HT
Sbjct: 40  ISCGDEHTSVVTENGKLYMFGSNNWGQLGFGSKNAVNKPTCVKALKPEKVKLAACGRNHT 99

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           +  +  G+VYA GGN  GQLG G  +  +   L+   + ++   K ++ G+  +AV+ +D
Sbjct: 100 LICTEQGNVYAAGGNSEGQLGLGDTEERSTFHLISFFTKQH-KIKQLAAGSYTSAVLTED 158

Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           G++  WG N  GQ+GLGD    ++P QV I G     ++CG++H+ L+ 
Sbjct: 159 GQLVMWGDNSEGQIGLGDKAYVSVPHQVDI-GKPVSCISCGYYHSALIT 206



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 123/254 (48%), Gaps = 40/254 (15%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
           ++ G  HT  +++ G+++ +G    GQLG GS+   V+ P    C+++            
Sbjct: 40  ISCGDEHTSVVTENGKLYMFGSNNWGQLGFGSK-NAVNKP---TCVKA------------ 83

Query: 286 GSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNC 345
                      +    VK  ACG  H+ + T+ G +   G    GQ G G T++  + + 
Sbjct: 84  -----------LKPEKVKLAACGRNHTLICTEQGNVYAAGGNSEGQLGLGDTEERSTFHL 132

Query: 346 VSSLLGI-QIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLD--APS 402
           +S      +I+ +AAG + +  ++ DG +  +G N  GQ+G G     ++P  +D   P 
Sbjct: 133 ISFFTKQHKIKQLAAGSYTSAVLTEDGQLVMWGDNSEGQIGLGDKAYVSVPHQVDIGKP- 191

Query: 403 LENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG--DVIDRNIPSQVT-IEGCVP 459
                   +SCG  H+A+I  DG+++ +G  + G+LGL    + +  +P  V+ I G V 
Sbjct: 192 -----VSCISCGYYHSALITQDGELYTFGEPENGKLGLSPKQLKNHKLPQLVSGISGKVS 246

Query: 460 RNVACGWWHTLLLA 473
           + VACG  HT++LA
Sbjct: 247 K-VACGGGHTVVLA 259


>gi|426220634|ref|XP_004004519.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ovis aries]
          Length = 4836

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 122/251 (48%), Gaps = 32/251 (12%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            ++   V +GG+H LALS  G+V+ WG   +G+LG G+R          PC       DR 
Sbjct: 4041 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR---------SPC-------DRP 4084

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
              +             + G  V  +A GG HSA +T AG L T+G G YG+ G   ++D+
Sbjct: 4085 RVIE-----------SLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQ 4133

Query: 341  LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V +L G ++  VA  +G   T+C++ D  V+++G   +G+LG GG     +P  +
Sbjct: 4134 LKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKI 4193

Query: 399  DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGC 457
            D  SL  +    V CG++ +  +   G V+ WG   Y +LG G       P QV  ++G 
Sbjct: 4194 D--SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGK 4251

Query: 458  VPRNVACGWWH 468
                +A G  H
Sbjct: 4252 KVIAIATGSLH 4262



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 129/255 (50%), Gaps = 29/255 (11%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           V+IA   + G H LAL+  G+V+ WG G  G+LG G  +     P   P + S++   ++
Sbjct: 497 VKIAA-HSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 550

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                             G +V  IACG  +SA IT  G L T+G G YG+ G GS++DE
Sbjct: 551 ------------------GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 592

Query: 341 LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
             P  V+ L G+++  VA  +G   T+ ++ +G V+++G   +G+LG GG      P+L+
Sbjct: 593 AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLI 652

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGC 457
           +   L+++    V CG++ +  +  DG+V+ WG     +LG G       P  +  ++G 
Sbjct: 653 E--KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGK 710

Query: 458 VPRNVACGWWHTLLL 472
              +VA G  H L L
Sbjct: 711 KVIDVAAGSTHCLAL 725



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 128/303 (42%), Gaps = 80/303 (26%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GGRH  AL+  G+V+ WG G +G+LG  SR+     P  I  +++   +D  
Sbjct: 3048 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRD-- 3104

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                    IACG  HSA +T +G L T+G G YG+ G G    +
Sbjct: 3105 ------------------------IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ 3140

Query: 341  LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V  LLG ++  VA G     T+ ++ +G V+++G   FG+LG GG +   +P+ +
Sbjct: 3141 LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNI 3200

Query: 399  DAPSLE------------------------------------NVHSKS------------ 410
            +  + +                                    +VH +             
Sbjct: 3201 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI 3260

Query: 411  --VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWW 467
              V+ GA H   + D G+V+ WG N +GQ G G       P+ V  +EG     VACG  
Sbjct: 3261 VHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3320

Query: 468  HTL 470
            H++
Sbjct: 3321 HSV 3323



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 133/328 (40%), Gaps = 66/328 (20%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V   +G  HC+A++  GEVY+WG  E         D   G G ++   +R    + E + 
Sbjct: 4044 VAVNSGGKHCLALSSEGEVYSWGEAE---------DGKLGHG-NRSPCDRPR--VIESLR 4091

Query: 161  PRSQVSRSSGGTSSG-TDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
                V  ++GG  S      G      K R   L    +E            P LV    
Sbjct: 4092 GTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLK--------PKLVEALQ 4143

Query: 220  GVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
            G R+  VA  +G   TL L+D   VW WG G  G+LG G                   G 
Sbjct: 4144 GHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-------------------GS 4184

Query: 278  DRSAALSRGSVNSEGPGFRVPGNY-------VKGIACGGRHSAVITDAGALLTFGWGLYG 330
            D               G +VP          V  + CG + S  +T +GA+ T+G G Y 
Sbjct: 4185 D---------------GCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4229

Query: 331  QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            + G GS D    P  V  L G ++  +A G  H +C S DG+VY +G N  GQLG G   
Sbjct: 4230 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTN 4289

Query: 391  AETLPRLLDAPSLENVHSKSVSCGARHT 418
            A   PRL+ A  L+      V+CG+ HT
Sbjct: 4290 AIQRPRLVAA--LQGKKVNRVACGSAHT 4315



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 111/398 (27%), Positives = 165/398 (41%), Gaps = 60/398 (15%)

Query: 55   GFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVT 114
            G   A +   K+  WG  +D  Q     G   ++P      +  ++V+ A G     AVT
Sbjct: 2951 GLESAATIRTKVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT 3009

Query: 115  EGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG--- 171
              G+VY  G      +GR+   +S+GT        RQ + L+  V  +  V+  SGG   
Sbjct: 3010 VEGKVYACGE---ATNGRLGLGISSGTV----PIPRQITALSSYVVKK--VAVHSGGRHA 3060

Query: 172  TSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVA 227
            T+   DG+    G G++G         K    S  + D+     P L+      RI  +A
Sbjct: 3061 TALTVDGKVFSWGEGDDG---------KLGHFSRMNCDK-----PRLIEALKTKRIRDIA 3106

Query: 228  AGGRHTLALSDIGQVWGWGYGGEGQLGLGS-----RIRMVSSPHPIPCIESSYGKDRSAA 282
             G  H+ AL+  G+++ WG G  G+LG G      + +MV        I+ + G   +  
Sbjct: 3107 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 3166

Query: 283  LS---RGSVNSEGPG-------------------FRVPGNYVKGIACGGRHSAVITDAGA 320
            L+    G V S G G                    R+ G  V  I CG + S  +T +G 
Sbjct: 3167 LALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGV 3226

Query: 321  LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
            + T+G G Y + G GS      P  V  L G +I  VA G  H + ++  G VYA+G N 
Sbjct: 3227 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDND 3286

Query: 381  FGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
             GQ G G       P L+    LE      V+CG+ H+
Sbjct: 3287 HGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHS 3322



 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 69/270 (25%), Positives = 123/270 (45%), Gaps = 46/270 (17%)

Query: 233  TLALSDIGQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAALSRG---- 286
            TL+    G ++GWG+   GQLG   G+++++     P PC   +    R   L  G    
Sbjct: 3947 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKV-----PTPC--EALAALRPVQLIGGEQTL 3999

Query: 287  -SVNSEGPGF-------------------------RVPGNYVKGIAC--GGRHSAVITDA 318
             +V ++G  +                          +   ++K +A   GG+H   ++  
Sbjct: 4000 FAVTADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4059

Query: 319  GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            G + ++G    G+ G G+      P  + SL G ++  VAAG  H+ C+++ GD+Y +G 
Sbjct: 4060 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGK 4119

Query: 379  NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGA--RHTAVIADDGKVFCWGWNKYG 436
             ++G+LG    + +  P+L++A  L+      V+CG+    T  + DD  V+ WG   YG
Sbjct: 4120 GRYGRLGHSDSEDQLKPKLVEA--LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYG 4177

Query: 437  QLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
            +LG G      +P ++ ++ G     V CG
Sbjct: 4178 KLGRGGSDGCKVPMKIDSLTGLGVVKVECG 4207



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 93/217 (42%), Gaps = 38/217 (17%)

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
           SS DE   A P LV    G+++  VA  +G   TLA+++ GQVW WG G  G+LG G   
Sbjct: 588 SSEDE---AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG--- 641

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITD 317
                                     GS   + P    ++    V  + CG + S  +T 
Sbjct: 642 --------------------------GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTK 675

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
            G + ++G G   + G G+ +    P  +  L G ++  VAAG  H + ++ D +V+++G
Sbjct: 676 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
            N   Q        +  P  L  P L+  H   ++CG
Sbjct: 736 SNDQCQHFDTLRVTKPEPSAL--PGLDTKHIVGIACG 770



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 83/310 (26%), Positives = 121/310 (39%), Gaps = 47/310 (15%)

Query: 57   AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEG 116
            A A++   K+ +WG  DD G+    S  + + P          I   A G +H  A+T  
Sbjct: 3060 ATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 3118

Query: 117  GEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGT 176
            GE+YTWG  E    GR  G     T L   + +        QV+  S+ +++   T  G 
Sbjct: 3119 GELYTWGLGE---YGR-LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174

Query: 177  DGR-GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLA 235
                G G+ G   R              G E  +    +  LN G  +  +  G + +LA
Sbjct: 3175 VFSWGDGDFGKLGR-------------GGSEGCNIPQNIERLN-GQGVCQIECGAQFSLA 3220

Query: 236  LSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF 295
            L+  G VW WG G   +LG GS +  V  P  +                         G 
Sbjct: 3221 LTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQVVE------------------------GL 3255

Query: 296  RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
            R  G  +  +A G  H   +TDAG +  +G   +GQ G G+T     P  V  L G +I 
Sbjct: 3256 R--GKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKIT 3313

Query: 356  GVAAGLWHTI 365
             VA G  H++
Sbjct: 3314 RVACGSSHSV 3323



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 120/276 (43%), Gaps = 48/276 (17%)

Query: 205  DENLSAFPCLVTLNP---------GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG- 254
            +E+L+A P L + N          G  I   AAG      +    +V+ WG   + QLG 
Sbjct: 2918 EEDLAAVPFLASDNEEEEDEKGNSGSLIRRKAAGLESAATIR--TKVFVWGLNDKDQLGG 2975

Query: 255  -LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSA 313
              GS+I++            S+ +  SA                  N V+ +A G +   
Sbjct: 2976 LKGSKIKV-----------PSFSETLSAL-----------------NVVQ-VAGGSKSLF 3006

Query: 314  VITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVA--AGLWHTICISSD 370
             +T  G +   G    G+ G G +   +  P  +++L    ++ VA  +G  H   ++ D
Sbjct: 3007 AVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVD 3066

Query: 371  GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
            G V+++G    G+LG         PRL++A  L+    + ++CG+ H+A +   G+++ W
Sbjct: 3067 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEA--LKTKRIRDIACGSSHSAALTSSGELYTW 3124

Query: 431  GWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACG 465
            G  +YG+LG GD   +  P  V +  G     VACG
Sbjct: 3125 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3160



 Score = 39.7 bits (91), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 34/73 (46%), Gaps = 5/73 (6%)

Query: 53   GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
            G  F++A++ S  + TWG  D   LG     S  H   P          ++  A G  HC
Sbjct: 4207 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRRPRQVQGLQGKKVIAIATGSLHC 4263

Query: 111  VAVTEGGEVYTWG 123
            V  +E GEVYTWG
Sbjct: 4264 VCCSEDGEVYTWG 4276



 Score = 39.7 bits (91), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 72/149 (48%), Gaps = 3/149 (2%)

Query: 324  FGWGL--YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
            +GWG    GQ G         P    +L  ++   +  G      +++DG +YA G    
Sbjct: 3957 YGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGYGAG 4016

Query: 382  GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
            G+LG GG ++ + P LL++     +   +V+ G +H   ++ +G+V+ WG  + G+LG G
Sbjct: 4017 GRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG 4076

Query: 442  DVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            +    + P  + ++ G    +VA G  H+
Sbjct: 4077 NRSPCDRPRVIESLRGTEVVDVAAGGAHS 4105


>gi|403347403|gb|EJY73122.1| RCC1 and BTB domaincontaining protein putative [Oxytricha
           trifallax]
          Length = 685

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 123/279 (44%), Gaps = 40/279 (14%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
           GD    + P  V     + +  +AAG  H   L+  G V   G+ G GQLG G+  + +S
Sbjct: 55  GDVQERSIPSQVRFFDEMNVTQIAAGNEHIAVLTRNGDVLTVGFNGSGQLGHGNN-KSIS 113

Query: 264 SPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLT 323
           +P  I  +++     R   +S                     A G  + A+I+  G L T
Sbjct: 114 TPKKIESLKNI----RITHISS--------------------ANGCENLAIISQDGKLYT 149

Query: 324 FGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD--------GDVYA 375
            G+  YGQ G G+  +  +P  V +L   Q+  V+   +H++ ++ D          VY+
Sbjct: 150 CGYNNYGQLGHGTQSNLSTPTLVQALKDTQVTNVSCSYYHSLIVTQDMRQASNQQTTVYS 209

Query: 376 FGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKY 435
            G N  GQLG      E  P+++   SL        +CG  H+  +   G+VF  G+N  
Sbjct: 210 VGRNDNGQLGQEHTCHEITPKII--RSLNTRQVIQTACGLHHSVFVTVHGEVFSCGFNDN 267

Query: 436 GQLGLGDVIDRNIPSQVTIEGCVPRNV---ACGWWHTLL 471
           GQLG  D   RN P  V IE    + +   ACG++HTL+
Sbjct: 268 GQLGHNDTKSRNQP--VLIESLKNKFIVQAACGYYHTLV 304



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 87/161 (54%), Gaps = 5/161 (3%)

Query: 316 TDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYA 375
           T A  +  FG   YG+ G G   +   P+ V     + +  +AAG  H   ++ +GDV  
Sbjct: 36  TGAPLVFVFGQNSYGELGLGDVQERSIPSQVRFFDEMNVTQIAAGNEHIAVLTRNGDVLT 95

Query: 376 FGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSC--GARHTAVIADDGKVFCWGWN 433
            G N  GQLG G +++ + P+ ++  SL+N+    +S   G  + A+I+ DGK++  G+N
Sbjct: 96  VGFNGSGQLGHGNNKSISTPKKIE--SLKNIRITHISSANGCENLAIISQDGKLYTCGYN 153

Query: 434 KYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLA 473
            YGQLG G   + + P+ V  ++     NV+C ++H+L++ 
Sbjct: 154 NYGQLGHGTQSNLSTPTLVQALKDTQVTNVSCSYYHSLIVT 194



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 80/348 (22%), Positives = 136/348 (39%), Gaps = 94/348 (27%)

Query: 219 PGVRIATVA-AGGRHTLAL-SDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYG 276
             +RI  ++ A G   LA+ S  G+++  GY   GQLG G++  + S+P  +  ++ +  
Sbjct: 122 KNIRITHISSANGCENLAIISQDGKLYTCGYNNYGQLGHGTQSNL-STPTLVQALKDTQV 180

Query: 277 KDRSAAL---------SRGSVNSEGPGFRVPGN-------------------------YV 302
            + S +           R + N +   + V  N                          V
Sbjct: 181 TNVSCSYYHSLIVTQDMRQASNQQTTVYSVGRNDNGQLGQEHTCHEITPKIIRSLNTRQV 240

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
              ACG  HS  +T  G + + G+   GQ G   T     P  + SL    I   A G +
Sbjct: 241 IQTACGLHHSVFVTVHGEVFSCGFNDNGQLGHNDTKSRNQPVLIESLKNKFIVQAACGYY 300

Query: 363 HTICISSDGDVYAFGGNQFGQLG-------------------------TGGDQAE----- 392
           HT+     G++YAFG N  GQLG                         +GG+Q +     
Sbjct: 301 HTLVRRDTGEIYAFGRNDKGQLGIETNGQALIQPKQIQEFLTVSNIQHSGGNQNQLHSGQ 360

Query: 393 ---------------TLPRLLDAPSLEN-----------VHSKSVSCGARHTAVIADDGK 426
                           +  L ++ +L N           V+   ++CG  H+  + + G+
Sbjct: 361 EHNQPSSQSLGESGAIMQGLAESNNLNNQQPQVQYLSKKVNISKIACGCYHSIALCESGQ 420

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLA 473
           +F +G   +GQLG G+  D+ +P QV ++       +A G++HT++L 
Sbjct: 421 LFTFGRGNHGQLGQGNTEDQKLPKQVASLHDKKVIGIAGGFYHTIVLV 468



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 99/226 (43%), Gaps = 42/226 (18%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP-- 269
           P L+       I   A G  HTL   D G+++ +G   +GQLG+ +  + +  P  I   
Sbjct: 281 PVLIESLKNKFIVQAACGYYHTLVRRDTGEIYAFGRNDKGQLGIETNGQALIQPKQIQEF 340

Query: 270 ----CIESSYGKD------------------RSAALSRG-----SVNSEGPGFRVPGNYV 302
                I+ S G                     S A+ +G     ++N++ P  +     V
Sbjct: 341 LTVSNIQHSGGNQNQLHSGQEHNQPSSQSLGESGAIMQGLAESNNLNNQQPQVQYLSKKV 400

Query: 303 K--GIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAG 360
               IACG  HS  + ++G L TFG G +GQ GQG+T+D+  P  V+SL   ++ G+A G
Sbjct: 401 NISKIACGCYHSIALCESGQLFTFGRGNHGQLGQGNTEDQKLPKQVASLHDKKVIGIAGG 460

Query: 361 LWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENV 406
            +HTI +     V         QL T       + ++++ PS  +V
Sbjct: 461 FYHTIVLVKQKKVKG-----ISQLSTD------MKKIINEPSRADV 495



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 76/162 (46%), Gaps = 21/162 (12%)

Query: 100 IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQ-SSFLTE- 157
           IV+AA G+ H +   + GE+Y +G  +        G L   T     +  +Q   FLT  
Sbjct: 292 IVQAACGYYHTLVRRDTGEIYAFGRNDK-------GQLGIETNGQALIQPKQIQEFLTVS 344

Query: 158 --QVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLV 215
             Q S  +Q    SG   +    +  GE G+      + +  AES++  ++     P + 
Sbjct: 345 NIQHSGGNQNQLHSGQEHNQPSSQSLGESGA------IMQGLAESNNLNNQQ----PQVQ 394

Query: 216 TLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS 257
            L+  V I+ +A G  H++AL + GQ++ +G G  GQLG G+
Sbjct: 395 YLSKKVNISKIACGCYHSIALCESGQLFTFGRGNHGQLGQGN 436


>gi|307176782|gb|EFN66182.1| Probable E3 ubiquitin-protein ligase HERC2 [Camponotus floridanus]
          Length = 4802

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 89/303 (29%), Positives = 133/303 (43%), Gaps = 80/303 (26%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            ++   V++GG+H LALS  G V+ WG G +G+LG G+++              SY  DR 
Sbjct: 4030 IKKVAVSSGGKHCLALSSEGHVYSWGEGDDGKLGHGNKM--------------SY--DRP 4073

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
              +             + G  +  IACGG HSA IT AG L T+G G YG+ G G +DD+
Sbjct: 4074 KLIED-----------LLGVEIIDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQ 4122

Query: 341  LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V +L   ++  VA  +G   T+C++ D +V+++G   +G+LG GG     +P  +
Sbjct: 4123 LRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKI 4182

Query: 399  DA--------------------------------------------------PSLENVHS 408
            D+                                                   +L+    
Sbjct: 4183 DSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKI 4242

Query: 409  KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWW 467
             S++ G+ H    +D G+VF WG N  GQLG G     + P  V  ++G     VACG  
Sbjct: 4243 ISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHALQGKKITRVACGSA 4302

Query: 468  HTL 470
            HTL
Sbjct: 4303 HTL 4305



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 91/273 (33%), Positives = 132/273 (48%), Gaps = 35/273 (12%)

Query: 228  AGGRHTL-ALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIE---------SSYGK 277
            AGG  TL A++  G+V+  GYG  G+LG+G     V  P  +  I+         SS GK
Sbjct: 3982 AGGEQTLFAVTADGKVYSTGYGAAGRLGIGG-TDSVMIPTLLESIQHVFIKKVAVSSGGK 4040

Query: 278  DRSAALSRGSVNSEGPG------------FRVP-------GNYVKGIACGGRHSAVITDA 318
               A  S G V S G G            +  P       G  +  IACGG HSA IT A
Sbjct: 4041 HCLALSSEGHVYSWGEGDDGKLGHGNKMSYDRPKLIEDLLGVEIIDIACGGHHSAAITSA 4100

Query: 319  GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAF 376
            G L T+G G YG+ G G +DD+L P  V +L   ++  VA  +G   T+C++ D +V+++
Sbjct: 4101 GWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSW 4160

Query: 377  GGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYG 436
            G   +G+LG GG     +P  +D  SL  +    V CG++ +  +   G V+ WG   Y 
Sbjct: 4161 GDGDYGKLGRGGSDGCKVPLKID--SLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYH 4218

Query: 437  QLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWH 468
            +LG G       P +V  ++G    ++A G  H
Sbjct: 4219 RLGHGTDDHVRRPRKVAALQGKKIISIATGSLH 4251



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 84/303 (27%), Positives = 127/303 (41%), Gaps = 80/303 (26%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            ++   V +GG+H LAL+  G+V+ WG G +G+LG G+ + +   P  I  ++S   +D  
Sbjct: 3048 IKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNNMSL-DKPKLIETLKSKRIRD-- 3104

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                    IACG  HSA I   G L T+G G YG+ G G T  +
Sbjct: 3105 ------------------------IACGSGHSAAIASNGELYTWGLGEYGRLGHGDTVTQ 3140

Query: 341  LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
              P  V +L+G ++  VA G     T+ +++DG VY++G   FG+LG GG      P ++
Sbjct: 3141 ARPKLVQTLVGHRVVQVACGSRDAQTMALTTDGCVYSWGDGDFGKLGRGGSDGCYTPLVV 3200

Query: 399  D----------------------------------------------APSL-ENVHSKS- 410
            +                                               P+L E +  K  
Sbjct: 3201 ERLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKI 3260

Query: 411  --VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWW 467
              V+ GA H   + D G+V+ WG N +GQ G G       PS V  +E      V+CG  
Sbjct: 3261 VHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTSVNRKPSLVHELEDARVNRVSCGSS 3320

Query: 468  HTL 470
            H++
Sbjct: 3321 HSI 3323



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 120/246 (48%), Gaps = 31/246 (12%)

Query: 228 AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI-----RMVSSPHPIPCIESSYGKDRSAA 282
           + G+H LAL+  G V+ WG G  G+LG G  +     +++ +      +  + G   SAA
Sbjct: 516 SDGKHHLALTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIEALLEKNIVFIACGSTYSAA 575

Query: 283 LS---------RGSVNSEGPG----FRVP-------GNYVKGIACGG--RHSAVITDAGA 320
           LS         RG+    G G      +P       G+ V  +ACG     +  +T +G 
Sbjct: 576 LSVSGELYTWGRGNYGRLGHGNFDDVMIPTLVTTLKGHTVVHVACGSGDSQTLCVTASGI 635

Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
           + ++G G YG+ G+G TD   +P  V  LL I +  V  G   +  +++ G+VY +G   
Sbjct: 636 VFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAHGEVYTWGKGD 695

Query: 381 FGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG- 439
             +LG G ++    P++++  SL +   K +S GA H  V+ +D  V+ WG N YGQ+  
Sbjct: 696 TYRLGHGSEEHVRYPKIIE--SLRDKKIKDLSVGATHILVLTEDQFVYGWGRNDYGQIDP 753

Query: 440 -LGDVI 444
            LG VI
Sbjct: 754 TLGSVI 759



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 95/338 (28%), Positives = 137/338 (40%), Gaps = 60/338 (17%)

Query: 89   PEPFPLPTEASIVKAA--AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKD 146
            P+P P  ++  I K A  +G  H +A+T+ G+V++WG  E        G L  G  +  D
Sbjct: 3037 PKPIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGE-------DGKLGHGNNMSLD 3089

Query: 147  VFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGR--GSGEEGSKRRRISLAKQTAESSSSG 204
              +   +  ++++   +  S  S   +S  +    G GE G                  G
Sbjct: 3090 KPKLIETLKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRL--------------GHG 3135

Query: 205  DENLSAFPCLVTLNPGVRIATVAAGGR--HTLALSDIGQVWGWGYGGEGQLGLGSRIRMV 262
            D    A P LV    G R+  VA G R   T+AL+  G V+ WG G  G+LG G      
Sbjct: 3136 DTVTQARPKLVQTLVGHRVVQVACGSRDAQTMALTTDGCVYSWGDGDFGKLGRG------ 3189

Query: 263  SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITDAGA 320
                                   GS     P    R+ G  V  + CG + S  +T  G 
Sbjct: 3190 -----------------------GSDGCYTPLVVERLNGLGVVQVECGAQFSLALTKYGE 3226

Query: 321  LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
            + T+G G Y + G G+      P  V  L G +I  VA G  H + ++  G VYA+G N 
Sbjct: 3227 VWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDND 3286

Query: 381  FGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
             GQ G G       P L+    LE+     VSCG+ H+
Sbjct: 3287 HGQQGNGTTSVNRKPSLVH--ELEDARVNRVSCGSSHS 3322



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 108/234 (46%), Gaps = 29/234 (12%)

Query: 212  PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS-----RIRMVSSPH 266
            P L+    GV I  +A GG H+ A++  G ++ WG G  G+LG G      R ++V +  
Sbjct: 4073 PKLIEDLLGVEIIDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQ 4132

Query: 267  PIPCIESSYGKDRSAAL--------------SRGSVNSEGP-GFRVP-------GNYVKG 304
                I+ + G   +  L                G +   G  G +VP       G  V  
Sbjct: 4133 DYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVIK 4192

Query: 305  IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
            + CG + S  +T +GA+ T+G G Y + G G+ D    P  V++L G +I  +A G  H 
Sbjct: 4193 VECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHC 4252

Query: 365  ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
            +  S  G+V+ +G N  GQLG G   A   PRL+ A  L+      V+CG+ HT
Sbjct: 4253 VACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHA--LQGKKITRVACGSAHT 4304



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 114/238 (47%), Gaps = 36/238 (15%)

Query: 233  TLALSDIGQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNS 290
            TL+    G ++GWG+   GQLG   G ++++     P PC                S+++
Sbjct: 3936 TLSWDGSGAIYGWGHNHRGQLGGLEGPKVKL-----PAPC---------------ESLSA 3975

Query: 291  EGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLL 350
              P           +A G +    +T  G + + G+G  G+ G G TD  + P  + S+ 
Sbjct: 3976 LRP---------IQLAGGEQTLFAVTADGKVYSTGYGAAGRLGIGGTDSVMIPTLLESIQ 4026

Query: 351  GIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHS 408
             + I+ VA  +G  H + +SS+G VY++G    G+LG G   +   P+L++   L  V  
Sbjct: 4027 HVFIKKVAVSSGGKHCLALSSEGHVYSWGEGDDGKLGHGNKMSYDRPKLIE--DLLGVEI 4084

Query: 409  KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
              ++CG  H+A I   G ++ WG  +YG+LG GD  D+  P  V  ++     +VACG
Sbjct: 4085 IDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACG 4142



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 51/164 (31%), Positives = 91/164 (55%), Gaps = 5/164 (3%)

Query: 305  IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA--AGLW 362
            IA G +   +++  G L   G G  G+ G G  ++   P  +  L    I+ VA  +G  
Sbjct: 2999 IAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDDNNVCEPKPIPFLSQFVIKKVAVHSGGK 3058

Query: 363  HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIA 422
            H + ++ DG V+++G  + G+LG G + +   P+L++  +L++   + ++CG+ H+A IA
Sbjct: 3059 HALALTQDGKVFSWGEGEDGKLGHGNNMSLDKPKLIE--TLKSKRIRDIACGSGHSAAIA 3116

Query: 423  DDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
             +G+++ WG  +YG+LG GD + +  P  V T+ G     VACG
Sbjct: 3117 SNGELYTWGLGEYGRLGHGDTVTQARPKLVQTLVGHRVVQVACG 3160



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 85/349 (24%), Positives = 136/349 (38%), Gaps = 70/349 (20%)

Query: 25   PQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDD--LGQSYVTS 82
            P+  P LS  V++         +     G   A+A++   K+ +WG  +D  LG      
Sbjct: 3037 PKPIPFLSQFVIK---------KVAVHSGGKHALALTQDGKVFSWGEGEDGKLGH----- 3082

Query: 83   GKHGEIPEPFPLPTEAS--IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTG 140
            G +  + +P  + T  S  I   A G  H  A+   GE+YTWG  E       +G L  G
Sbjct: 3083 GNNMSLDKPKLIETLKSKRIRDIACGSGHSAAIASNGELYTWGLGE-------YGRLGHG 3135

Query: 141  TGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQ 196
              + +   +   + +  +V   +  SR +   +  TDG     G G+ G   R       
Sbjct: 3136 DTVTQARPKLVQTLVGHRVVQVACGSRDAQTMALTTDGCVYSWGDGDFGKLGR------- 3188

Query: 197  TAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLG 256
                   G  +    P +V    G+ +  V  G + +LAL+  G+VW WG G   +LG G
Sbjct: 3189 -------GGSDGCYTPLVVERLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHG 3241

Query: 257  SRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVIT 316
            +        H +          R   L  G          + G  +  +A G  H   +T
Sbjct: 3242 N-------DHHV----------RKPTLVEG----------LRGKKIVHVAVGALHCLAVT 3274

Query: 317  DAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTI 365
            D G +  +G   +GQ G G+T     P+ V  L   ++  V+ G  H+I
Sbjct: 3275 DTGQVYAWGDNDHGQQGNGTTSVNRKPSLVHELEDARVNRVSCGSSHSI 3323



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 63/104 (60%), Gaps = 3/104 (2%)

Query: 363 HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIA 422
           H + ++ DG VY++G    G+LG G   +   P+L++A   +N+    ++CG+ ++A ++
Sbjct: 520 HHLALTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIEALLEKNI--VFIACGSTYSAALS 577

Query: 423 DDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
             G+++ WG   YG+LG G+  D  IP+ V T++G    +VACG
Sbjct: 578 VSGELYTWGRGNYGRLGHGNFDDVMIPTLVTTLKGHTVVHVACG 621



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 65/129 (50%), Gaps = 4/129 (3%)

Query: 346  VSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLEN 405
            +S L  I I G +  L+    +S +G +YA G    G+LG G D     P+ +   S   
Sbjct: 2991 LSKLKPIHIAGGSKTLF---IVSQEGKLYACGEGTNGRLGLGDDNNVCEPKPIPFLSQFV 3047

Query: 406  VHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVAC 464
            +   +V  G +H   +  DGKVF WG  + G+LG G+ +  + P  + T++    R++AC
Sbjct: 3048 IKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNNMSLDKPKLIETLKSKRIRDIAC 3107

Query: 465  GWWHTLLLA 473
            G  H+  +A
Sbjct: 3108 GSGHSAAIA 3116



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 77/176 (43%), Gaps = 29/176 (16%)

Query: 211 FPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
            P LVT   G  +  VA  +G   TL ++  G V+ WG G  G+LG G            
Sbjct: 603 IPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRG------------ 650

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL 328
                  G D       GS   +     +  N VK + CG + SA +T  G + T+G G 
Sbjct: 651 -------GTD-------GSKTPKIVDKLLDINVVK-VFCGSQFSAALTAHGEVYTWGKGD 695

Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQL 384
             + G GS +    P  + SL   +I+ ++ G  H + ++ D  VY +G N +GQ+
Sbjct: 696 TYRLGHGSEEHVRYPKIIESLRDKKIKDLSVGATHILVLTEDQFVYGWGRNDYGQI 751



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 66/125 (52%), Gaps = 4/125 (3%)

Query: 346  VSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLEN 405
            +S+L  IQ+ G    L+    +++DG VY+ G    G+LG GG  +  +P LL++     
Sbjct: 3973 LSALRPIQLAGGEQTLF---AVTADGKVYSTGYGAAGRLGIGGTDSVMIPTLLESIQHVF 4029

Query: 406  VHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVAC 464
            +   +VS G +H   ++ +G V+ WG    G+LG G+ +  + P  +  + G    ++AC
Sbjct: 4030 IKKVAVSSGGKHCLALSSEGHVYSWGEGDDGKLGHGNKMSYDRPKLIEDLLGVEIIDIAC 4089

Query: 465  GWWHT 469
            G  H+
Sbjct: 4090 GGHHS 4094



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 121/301 (40%), Gaps = 56/301 (18%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFL-TEQV 159
            V  ++G  HC+A++  G VY+WG  +        G L  G  +  D  +     L  E +
Sbjct: 4033 VAVSSGGKHCLALSSEGHVYSWGEGD-------DGKLGHGNKMSYDRPKLIEDLLGVEII 4085

Query: 160  SPRSQVSRSSGGTSSG---TDGRGS-GEEGSKRRRISLAKQTAESSSSGDENLSAFPCLV 215
                    S+  TS+G   T G+G  G  G                  GD +    P +V
Sbjct: 4086 DIACGGHHSAAITSAGWLYTWGKGRYGRLGH-----------------GDSDDQLRPKVV 4128

Query: 216  TLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLG----SRIRM-VSSPHPI 268
                  ++  VA  +G   TL ++D   VW WG G  G+LG G     ++ + + S   +
Sbjct: 4129 EALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGL 4188

Query: 269  PCIESSYGKDRSAALSR-GSVNSEGPG------------FRVP-------GNYVKGIACG 308
              I+   G   S AL+R G+V + G G             R P       G  +  IA G
Sbjct: 4189 GVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATG 4248

Query: 309  GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICIS 368
              H    +D G + T+G    GQ G G+T     P  V +L G +I  VA G  HT+  S
Sbjct: 4249 SLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHALQGKKITRVACGSAHTLAWS 4308

Query: 369  S 369
            +
Sbjct: 4309 T 4309



 Score = 40.8 bits (94), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 8/92 (8%)

Query: 37   RLPLTVGS-AWRDVCGGGCG--FAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEP 91
            ++PL + S A   V    CG  F++A++ S  + TWG  D   LG     +  H   P  
Sbjct: 4177 KVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHG---TDDHVRRPRK 4233

Query: 92   FPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
                    I+  A G  HCVA ++ GEV+TWG
Sbjct: 4234 VAALQGKKIISIATGSLHCVACSDKGEVFTWG 4265


>gi|3414809|gb|AAC31431.1| rjs [Mus musculus]
          Length = 4836

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 87/292 (29%), Positives = 146/292 (50%), Gaps = 31/292 (10%)

Query: 186 SKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAA--GGRHTLALSDIGQVW 243
           +++R + L++     + + + ++ A P LV       I  +AA   G H LAL+  G+V+
Sbjct: 460 AEKRFLILSRNGRVYTQAYNSDMLA-PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY 518

Query: 244 GWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVK 303
            WG G  G+LG G  +     P   P + S++   ++                  G +V 
Sbjct: 519 SWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA------------------GKHVV 555

Query: 304 GIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA--AGL 361
            IACG  +SA IT  G L T+G G YG+ G GS++DE  P  V+ L G+++  VA  +G 
Sbjct: 556 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGD 615

Query: 362 WHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
             T+ ++ +G V+++G   +G+LG GG      P+L++   L+++    V CG++ +  +
Sbjct: 616 AQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE--KLQDLDVIKVRCGSQFSIAL 673

Query: 422 ADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
             DG+V+ WG     +LGLG       P  +  ++G    +VA G  H L L
Sbjct: 674 TKDGQVYSWGKGDNQRLGLGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 725



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 128/303 (42%), Gaps = 80/303 (26%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GGRH  AL+  G+V+ WG G +G+LG  SR+     P  I  +++   +D  
Sbjct: 3048 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRD-- 3104

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                    IACG  HSA +T +G L T+G G YG+ G G    +
Sbjct: 3105 ------------------------IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ 3140

Query: 341  LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V  LLG ++  VA G     T+ ++ +G V+++G   FG+LG GG +   +P+ +
Sbjct: 3141 LKPKMVKVLLGHRVIQVACGTRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNI 3200

Query: 399  DAPSLE------------------------------------NVHSKS------------ 410
            +  + +                                    +VH +             
Sbjct: 3201 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI 3260

Query: 411  --VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWW 467
              V+ GA H   + D G+V+ WG N +GQ G G       P+ V  +EG     VACG  
Sbjct: 3261 VHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3320

Query: 468  HTL 470
            H++
Sbjct: 3321 HSV 3323



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 103/358 (28%), Positives = 147/358 (41%), Gaps = 68/358 (18%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V   +G  HC+A++  GEVY+WG  E         D   G G ++   +R    + E + 
Sbjct: 4044 VAVNSGGKHCLALSSEGEVYSWGEAE---------DGKLGHG-NRSPCDRPR--VIESLR 4091

Query: 161  PRSQVSRSSGGTSSG-TDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
                V  ++GG  S      G      K R   L    +E            P LV    
Sbjct: 4092 GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLK--------PKLVEALQ 4143

Query: 220  GVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
            G R+  +A  +G   TL L+D   VW WG G  G+LG G                   G 
Sbjct: 4144 GHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-------------------GS 4184

Query: 278  DRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST 337
            D S    +  ++S      + G  V  + CG + S  +T +GA+ T+G G Y + G GS 
Sbjct: 4185 DGSKVPMK--IDS------LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD 4236

Query: 338  DDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
            D    P  V  L G ++  +A G  H +C + DG+VY +G N  GQLG G   A   PRL
Sbjct: 4237 DHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRL 4296

Query: 398  LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
            + A  L+      V+CG+ HT           W  +K    G        +P+QV +E
Sbjct: 4297 VAA--LQGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPAQVPME 4336



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 163/389 (41%), Gaps = 60/389 (15%)

Query: 65   KLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGW 124
            K+  WG  +D  Q     G   ++P      +  ++V+ A G     AVT  G+VY+ G 
Sbjct: 2961 KVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGE 3019

Query: 125  KECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG---TSSGTDGR-- 179
                 +GR+   +S+GT        RQ + L+  V  +  V+  SGG   T+   DG+  
Sbjct: 3020 ---ATNGRLGLGMSSGTV----PIPRQITALSSYVVKK--VAVHSGGRHATALTVDGKVF 3070

Query: 180  --GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS 237
              G G++G         K    S  + D+     P L+      RI  +A G  H+ AL+
Sbjct: 3071 SWGEGDDG---------KLGHFSRMNCDK-----PRLIEALKTKRIRDIACGSSHSAALT 3116

Query: 238  DIGQVWGWGYGGEGQLGLGS-----RIRMVSSPHPIPCIESSYGKDRSAALS---RGSVN 289
              G+++ WG G  G+LG G      + +MV        I+ + G   +  L+    G V 
Sbjct: 3117 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGTRDAQTLALTDEGLVF 3176

Query: 290  SEGPG-------------------FRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
            S G G                    R+ G  V  I CG + S  +T +G + T+G G Y 
Sbjct: 3177 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 3236

Query: 331  QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            + G GS      P  V  L G +I  VA G  H + ++  G VYA+G N  GQ G G   
Sbjct: 3237 RLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTT 3296

Query: 391  AETLPRLLDAPSLENVHSKSVSCGARHTA 419
                P L+    LE      V+CG+ H+ 
Sbjct: 3297 VNRKPTLVQG--LEGQKITRVACGSSHSV 3323



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/276 (25%), Positives = 123/276 (44%), Gaps = 50/276 (18%)

Query: 225  TVAAGGRHTLALSDIGQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAA 282
            T++AGG         G ++GWG+   GQLG   G+++++     P PC   +    R   
Sbjct: 3947 TLSAGGS--------GTIYGWGHNHRGQLGGIEGAKVKV-----PTPC--EALATLRPVQ 3991

Query: 283  LSRG-----SVNSEGPGF-------------------------RVPGNYVKGIAC--GGR 310
            L  G     +V ++G  +                          +   ++K +A   GG+
Sbjct: 3992 LIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGK 4051

Query: 311  HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
            H   ++  G + ++G    G+ G G+      P  + SL GI++  VAAG  H+ C+++ 
Sbjct: 4052 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAA 4111

Query: 371  GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
            GD+Y +G  ++G+LG    + +  P+L++A     V   +   G   T  + DD  V+ W
Sbjct: 4112 GDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSW 4171

Query: 431  GWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
            G   YG+LG G      +P ++ ++ G     V CG
Sbjct: 4172 GDGDYGKLGRGGSDGSKVPMKIDSLTGLGVVKVECG 4207



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 93/217 (42%), Gaps = 38/217 (17%)

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
           SS DE   A P LV    G+++  VA  +G   TLA+++ GQVW WG G  G+LG G   
Sbjct: 588 SSEDE---AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG--- 641

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITD 317
                                     GS   + P    ++    V  + CG + S  +T 
Sbjct: 642 --------------------------GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTK 675

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
            G + ++G G   + G G+ +    P  +  L G ++  VAAG  H + ++ D +V+++G
Sbjct: 676 DGQVYSWGKGDNQRLGLGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
            N   Q         T P     P L++ H   ++CG
Sbjct: 736 SND--QCQHFDTLRVTKPEPTALPGLDSKHIVGIACG 770



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 86/177 (48%), Gaps = 6/177 (3%)

Query: 302  VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVA-- 358
            V  +A G +    +T  G + + G    G+ G G +   +  P  +++L    ++ VA  
Sbjct: 2995 VVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVH 3054

Query: 359  AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
            +G  H   ++ DG V+++G    G+LG         PRL++A  L+    + ++CG+ H+
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA--LKTKRIRDIACGSSHS 3112

Query: 419  AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACGWWHTLLLAV 474
            A +   G+++ WG  +YG+LG GD   +  P  V +  G     VACG      LA+
Sbjct: 3113 AALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGTRDAQTLAL 3169



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 5/73 (6%)

Query: 53   GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
            G  F++A++ S  + TWG  D   LG     S  H   P          ++  A G  HC
Sbjct: 4207 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRRPRQVQGLQGKKVIAIATGSLHC 4263

Query: 111  VAVTEGGEVYTWG 123
            V  TE GEVYTWG
Sbjct: 4264 VCCTEDGEVYTWG 4276


>gi|440911989|gb|ELR61602.1| E3 ubiquitin-protein ligase HERC2 [Bos grunniens mutus]
          Length = 4835

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 122/251 (48%), Gaps = 32/251 (12%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            ++   V +GG+H LALS  G+V+ WG   +G+LG G+R          PC       DR 
Sbjct: 4040 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR---------SPC-------DRP 4083

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
              +             + G  V  +A GG HSA +T AG L T+G G YG+ G   ++D+
Sbjct: 4084 RVIE-----------SLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQ 4132

Query: 341  LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V +L G ++  VA  +G   T+C++ D  V+++G   +G+LG GG     +P  +
Sbjct: 4133 LKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKI 4192

Query: 399  DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGC 457
            D  SL  +    V CG++ +  +   G V+ WG   Y +LG G       P QV  ++G 
Sbjct: 4193 D--SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGK 4250

Query: 458  VPRNVACGWWH 468
                +A G  H
Sbjct: 4251 KVIAIATGSLH 4261



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 129/255 (50%), Gaps = 29/255 (11%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           V+IA   + G H LAL+  G+V+ WG G  G+LG G  +     P   P + S++   ++
Sbjct: 497 VKIAA-HSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 550

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                             G +V  IACG  +SA IT  G L T+G G YG+ G GS++DE
Sbjct: 551 ------------------GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 592

Query: 341 LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
             P  V+ L G+++  VA  +G   T+ ++ +G V+++G   +G+LG GG      P+L+
Sbjct: 593 AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLI 652

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGC 457
           +   L+++    V CG++ +  +  DG+V+ WG     +LG G       P  +  ++G 
Sbjct: 653 E--KLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGK 710

Query: 458 VPRNVACGWWHTLLL 472
              +VA G  H L L
Sbjct: 711 KVIDVAAGSTHCLAL 725



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 128/303 (42%), Gaps = 80/303 (26%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GGRH  AL+  G+V+ WG G +G+LG  SR+     P  I  +++   +D  
Sbjct: 3046 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRD-- 3102

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                    IACG  HSA +T +G L T+G G YG+ G G    +
Sbjct: 3103 ------------------------IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ 3138

Query: 341  LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V  LLG ++  VA G     T+ ++ +G V+++G   FG+LG GG +   +P+ +
Sbjct: 3139 LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNI 3198

Query: 399  DAPSLE------------------------------------NVHSKS------------ 410
            +  + +                                    +VH +             
Sbjct: 3199 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI 3258

Query: 411  --VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWW 467
              V+ GA H   + D G+V+ WG N +GQ G G       P+ V  +EG     VACG  
Sbjct: 3259 VHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3318

Query: 468  HTL 470
            H++
Sbjct: 3319 HSV 3321



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 133/328 (40%), Gaps = 66/328 (20%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V   +G  HC+A++  GEVY+WG  E         D   G G ++   +R    + E + 
Sbjct: 4043 VAVNSGGKHCLALSSEGEVYSWGEAE---------DGKLGHG-NRSPCDRPR--VIESLR 4090

Query: 161  PRSQVSRSSGGTSSG-TDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
                V  ++GG  S      G      K R   L    +E            P LV    
Sbjct: 4091 GTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLK--------PKLVEALQ 4142

Query: 220  GVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
            G R+  VA  +G   TL L+D   VW WG G  G+LG G                   G 
Sbjct: 4143 GHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-------------------GS 4183

Query: 278  DRSAALSRGSVNSEGPGFRVPGNY-------VKGIACGGRHSAVITDAGALLTFGWGLYG 330
            D               G +VP          V  + CG + S  +T +GA+ T+G G Y 
Sbjct: 4184 D---------------GCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4228

Query: 331  QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            + G GS D    P  V  L G ++  +A G  H +C S DG+VY +G N  GQLG G   
Sbjct: 4229 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTN 4288

Query: 391  AETLPRLLDAPSLENVHSKSVSCGARHT 418
            A   PRL+ A  L+      V+CG+ HT
Sbjct: 4289 AIQRPRLVAA--LQGKKVNRVACGSAHT 4314



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 111/399 (27%), Positives = 165/399 (41%), Gaps = 60/399 (15%)

Query: 55   GFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVT 114
            G   A +   K+  WG  +D  Q     G   ++P      +  ++V+ A G     AVT
Sbjct: 2949 GLESAATIRTKVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT 3007

Query: 115  EGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG--- 171
              G+VY  G      +GR+   +S+GT        RQ + L+  V  +  V+  SGG   
Sbjct: 3008 VEGKVYACGE---ATNGRLGLGISSGTV----PIPRQITALSSYVVKK--VAVHSGGRHA 3058

Query: 172  TSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVA 227
            T+   DG+    G G++G         K    S  + D+     P L+      RI  +A
Sbjct: 3059 TALTVDGKVFSWGEGDDG---------KLGHFSRMNCDK-----PRLIEALKTKRIRDIA 3104

Query: 228  AGGRHTLALSDIGQVWGWGYGGEGQLGLGS-----RIRMVSSPHPIPCIESSYGKDRSAA 282
             G  H+ AL+  G+++ WG G  G+LG G      + +MV        I+ + G   +  
Sbjct: 3105 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 3164

Query: 283  LS---RGSVNSEGPG-------------------FRVPGNYVKGIACGGRHSAVITDAGA 320
            L+    G V S G G                    R+ G  V  I CG + S  +T +G 
Sbjct: 3165 LALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGV 3224

Query: 321  LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
            + T+G G Y + G GS      P  V  L G +I  VA G  H + ++  G VYA+G N 
Sbjct: 3225 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDND 3284

Query: 381  FGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
             GQ G G       P L+    LE      V+CG+ H+ 
Sbjct: 3285 HGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 3321



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 69/270 (25%), Positives = 123/270 (45%), Gaps = 46/270 (17%)

Query: 233  TLALSDIGQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAALSRG---- 286
            TL+    G ++GWG+   GQLG   G+++++     P PC   +    R   L  G    
Sbjct: 3946 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKV-----PTPC--EALAALRPVQLIGGEQTL 3998

Query: 287  -SVNSEGPGF-------------------------RVPGNYVKGIAC--GGRHSAVITDA 318
             +V ++G  +                          +   ++K +A   GG+H   ++  
Sbjct: 3999 FAVTADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4058

Query: 319  GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            G + ++G    G+ G G+      P  + SL G ++  VAAG  H+ C+++ GD+Y +G 
Sbjct: 4059 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGK 4118

Query: 379  NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGA--RHTAVIADDGKVFCWGWNKYG 436
             ++G+LG    + +  P+L++A  L+      V+CG+    T  + DD  V+ WG   YG
Sbjct: 4119 GRYGRLGHSDSEDQLKPKLVEA--LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYG 4176

Query: 437  QLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
            +LG G      +P ++ ++ G     V CG
Sbjct: 4177 KLGRGGSDGCKVPMKIDSLTGLGVVKVECG 4206



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 93/217 (42%), Gaps = 38/217 (17%)

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
           SS DE   A P LV    G+++  VA  +G   TLA+++ GQVW WG G  G+LG G   
Sbjct: 588 SSEDE---AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG--- 641

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITD 317
                                     GS   + P    ++    V  + CG + S  +T 
Sbjct: 642 --------------------------GSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTK 675

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
            G + ++G G   + G G+ +    P  +  L G ++  VAAG  H + ++ D +V+++G
Sbjct: 676 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
            N   Q        +  P  L  P L+  H   ++CG
Sbjct: 736 SNDQCQHFDTLRVTKPEPSAL--PGLDTKHIVGIACG 770



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 70/276 (25%), Positives = 120/276 (43%), Gaps = 48/276 (17%)

Query: 205  DENLSAFPCLVTLNP---------GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG- 254
            +E+++A P L + N          G  I   AAG      +    +V+ WG   + QLG 
Sbjct: 2916 EEDMAAVPFLASDNEEEEDEKGNSGSLIRKKAAGLESAATIR--TKVFVWGLNDKDQLGG 2973

Query: 255  -LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSA 313
              GS+I++            S+ +  SA                  N V+ +A G +   
Sbjct: 2974 LKGSKIKV-----------PSFSETLSAL-----------------NVVQ-VAGGSKSLF 3004

Query: 314  VITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVA--AGLWHTICISSD 370
             +T  G +   G    G+ G G +   +  P  +++L    ++ VA  +G  H   ++ D
Sbjct: 3005 AVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVD 3064

Query: 371  GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
            G V+++G    G+LG         PRL++A  L+    + ++CG+ H+A +   G+++ W
Sbjct: 3065 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEA--LKTKRIRDIACGSSHSAALTSSGELYTW 3122

Query: 431  GWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACG 465
            G  +YG+LG GD   +  P  V +  G     VACG
Sbjct: 3123 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3158



 Score = 39.7 bits (91), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 34/73 (46%), Gaps = 5/73 (6%)

Query: 53   GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
            G  F++A++ S  + TWG  D   LG     S  H   P          ++  A G  HC
Sbjct: 4206 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRRPRQVQGLQGKKVIAIATGSLHC 4262

Query: 111  VAVTEGGEVYTWG 123
            V  +E GEVYTWG
Sbjct: 4263 VCCSEDGEVYTWG 4275



 Score = 39.7 bits (91), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 72/149 (48%), Gaps = 3/149 (2%)

Query: 324  FGWGL--YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
            +GWG    GQ G         P    +L  ++   +  G      +++DG +YA G    
Sbjct: 3956 YGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGYGAG 4015

Query: 382  GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
            G+LG GG ++ + P LL++     +   +V+ G +H   ++ +G+V+ WG  + G+LG G
Sbjct: 4016 GRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG 4075

Query: 442  DVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            +    + P  + ++ G    +VA G  H+
Sbjct: 4076 NRSPCDRPRVIESLRGTEVVDVAAGGAHS 4104


>gi|270001314|gb|EEZ97761.1| hect domain and RLD 2-like protein [Tribolium castaneum]
          Length = 3894

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 85/303 (28%), Positives = 132/303 (43%), Gaps = 80/303 (26%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            ++   V +GG+H LALS    V+ WG G +G+LG G+R+    +P  I  ++        
Sbjct: 3118 IKKIAVNSGGKHCLALSADNDVYSWGEGDDGKLGHGNRL-ACETPKLIEALQ-------- 3168

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                              G  +  IACGG HSA IT  G L T+G G YG+ G G ++D+
Sbjct: 3169 ------------------GYEIIDIACGGAHSAAITSTGQLYTWGKGRYGRLGHGDSEDQ 3210

Query: 341  LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  +  L+G ++  VA  +G   T+CI+ D +V+++G   +G+LG GG     +P+ +
Sbjct: 3211 LKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPKKI 3270

Query: 399  DA--------------------------------------------------PSLENVHS 408
            ++                                                   +L+    
Sbjct: 3271 ESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGTGEHVRRPKKVAALQGKKI 3330

Query: 409  KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWW 467
             S++ G+ H    +D+G+VF WG N  GQLG         P  V+ ++G    NVACG  
Sbjct: 3331 ISIATGSLHCVACSDEGEVFTWGDNDEGQLGDDTTNAIQRPRLVSALQGKKITNVACGSA 3390

Query: 468  HTL 470
            HTL
Sbjct: 3391 HTL 3393



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 128/303 (42%), Gaps = 80/303 (26%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            ++   V +GG+H +AL+  G+V+ WG G +G+LG G+R+ +   P  I  + S   +D  
Sbjct: 2142 IKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLNL-DKPKMIEALRSKKIRD-- 2198

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                    IACG  HSA IT +G L T+G G YG+ G G    +
Sbjct: 2199 ------------------------IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNITQ 2234

Query: 341  LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  + SL+G +I  VA G     T+ ++ +G V+++G   FG+LG GG +   +P  +
Sbjct: 2235 LKPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGRGGSEGCNIPHNI 2294

Query: 399  D--------------------------------------------------APSLENVHS 408
            +                                                    SL++   
Sbjct: 2295 ERLNALEVVQIECGAQFSLALTKTGEVWTWGKGDYFRLGHGSDQHVRKPTVIESLKDKKV 2354

Query: 409  KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWW 467
              V+ GA H   + D G+V+ WG N +GQ G G  I    P+ V  +E      VACG  
Sbjct: 2355 IHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTIVNRKPALVHGLEDVHINRVACGSS 2414

Query: 468  HTL 470
            H++
Sbjct: 2415 HSI 2417



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 102/336 (30%), Positives = 142/336 (42%), Gaps = 56/336 (16%)

Query: 89   PEPFPLPTEASIVKAA--AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKD 146
            P P P  ++  I K A  +G  H +A+T  G+V++WG  E        G L  G  L+ D
Sbjct: 2131 PRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGE-------DGKLGHGNRLNLD 2183

Query: 147  VFERQSSFLTEQVSPRSQ-VSRSSGGTSSGTDGR-GSGEEGSKRRRISLAKQTAESSSSG 204
              +   +  ++++   +   S S+  TSSG     G GE G                  G
Sbjct: 2184 KPKMIEALRSKKIRDIACGSSHSAAITSSGELYTWGLGEYGRL--------------GHG 2229

Query: 205  DENLSAFPCLVTLNPGVRIATVAAGGR--HTLALSDIGQVWGWGYGGEGQLGLGSRIRMV 262
            D      P L+    G RI  VA G R   TLAL+D G V+ WG G  G+LG G      
Sbjct: 2230 DNITQLKPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGRGGS-EGC 2288

Query: 263  SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL 322
            + PH I         +R  AL                  V  I CG + S  +T  G + 
Sbjct: 2289 NIPHNI---------ERLNALE-----------------VVQIECGAQFSLALTKTGEVW 2322

Query: 323  TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFG 382
            T+G G Y + G GS      P  + SL   ++  VA G  H + ++  G VYA+G N  G
Sbjct: 2323 TWGKGDYFRLGHGSDQHVRKPTVIESLKDKKVIHVAVGALHCLAVTDTGQVYAWGDNDHG 2382

Query: 383  QLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
            Q G G       P L+    LE+VH   V+CG+ H+
Sbjct: 2383 QQGNGTTIVNRKPALVHG--LEDVHINRVACGSSHS 2416



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 106/239 (44%), Gaps = 39/239 (16%)

Query: 212  PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP-- 269
            P L+    G  I  +A GG H+ A++  GQ++ WG G  G+LG G     +  P  I   
Sbjct: 3161 PKLIEALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRYGRLGHGDSEDQLK-PKLIEEL 3219

Query: 270  ------------------CIES-----SYGKDRSAALSRGSVNSEGPGFRVPGNY----- 301
                              CI       S+G      L RG  +    G +VP        
Sbjct: 3220 VGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSD----GCKVPKKIESLAG 3275

Query: 302  --VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAA 359
              V  + CG + S  +T +G++ T+G G Y + G G+ +    P  V++L G +I  +A 
Sbjct: 3276 LGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGTGEHVRRPKKVAALQGKKIISIAT 3335

Query: 360  GLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
            G  H +  S +G+V+ +G N  GQLG     A   PRL+ A  L+     +V+CG+ HT
Sbjct: 3336 GSLHCVACSDEGEVFTWGDNDEGQLGDDTTNAIQRPRLVSA--LQGKKITNVACGSAHT 3392



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 69/232 (29%), Positives = 110/232 (47%), Gaps = 38/232 (16%)

Query: 240  GQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRV 297
            G ++GWG+   GQLG   G+++++     P PC                    E      
Sbjct: 3031 GTIYGWGHNHRGQLGGIEGAKVKI-----PTPC--------------------EALSTLR 3065

Query: 298  PGNYVKGIACGGRHSAV-ITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG 356
            P   V     GG  +   +T  G +   G+G  G+ G G TD  L P  + S+  + I+ 
Sbjct: 3066 PVQLV-----GGEQTLFAVTADGKVYATGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKK 3120

Query: 357  VA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
            +A  +G  H + +S+D DVY++G    G+LG G   A   P+L++A  L+      ++CG
Sbjct: 3121 IAVNSGGKHCLALSADNDVYSWGEGDDGKLGHGNRLACETPKLIEA--LQGYEIIDIACG 3178

Query: 415  ARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
              H+A I   G+++ WG  +YG+LG GD  D+  P  +  + G    +VACG
Sbjct: 3179 GAHSAAITSTGQLYTWGKGRYGRLGHGDSEDQLKPKLIEELVGYKVIDVACG 3230



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 87/164 (53%), Gaps = 5/164 (3%)

Query: 305  IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA--AGLW 362
            IA G +   +++  G L   G G  G+ G G +++   P  +  L    I+ VA  +G  
Sbjct: 2093 IAGGSKSLFIVSHEGKLYACGEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGK 2152

Query: 363  HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIA 422
            H + ++ DG V+++G  + G+LG G       P++++A  L +   + ++CG+ H+A I 
Sbjct: 2153 HAMALTLDGKVFSWGEGEDGKLGHGNRLNLDKPKMIEA--LRSKKIRDIACGSSHSAAIT 2210

Query: 423  DDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
              G+++ WG  +YG+LG GD I +  P  + ++ G     VACG
Sbjct: 2211 SSGELYTWGLGEYGRLGHGDNITQLKPKLIKSLVGHRIVQVACG 2254



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 83/195 (42%), Gaps = 27/195 (13%)

Query: 204  GDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLG----- 256
            GD      P L+    G ++  VA  +G   TL ++D   VW WG G  G+LG G     
Sbjct: 3205 GDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGC 3264

Query: 257  SRIRMVSSPHPIPCIESSYGKDRSAALSR-GSVNSEGPG------------FRVP----- 298
               + + S   +  I+   G   S AL+R GSV + G G             R P     
Sbjct: 3265 KVPKKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGTGEHVRRPKKVAA 3324

Query: 299  --GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG 356
              G  +  IA G  H    +D G + T+G    GQ G  +T+    P  VS+L G +I  
Sbjct: 3325 LQGKKIISIATGSLHCVACSDEGEVFTWGDNDEGQLGDDTTNAIQRPRLVSALQGKKITN 3384

Query: 357  VAAGLWHTICISSDG 371
            VA G  HT+  S++ 
Sbjct: 3385 VACGSAHTLAWSTNN 3399



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 69/153 (45%), Gaps = 9/153 (5%)

Query: 323  TFGWGLYGQCGQG-----STDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
             F WGL  +   G          +  + +S L  I I G +  L+    +S +G +YA G
Sbjct: 2057 VFVWGLNDKDQLGGMKGSKVKLPVQSDFLSQLWPIHIAGGSKSLF---IVSHEGKLYACG 2113

Query: 378  GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQ 437
                G+LG G       PR +   S   +   +V  G +H   +  DGKVF WG  + G+
Sbjct: 2114 EGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGEDGK 2173

Query: 438  LGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            LG G+ ++ + P  +  +     R++ACG  H+
Sbjct: 2174 LGHGNRLNLDKPKMIEALRSKKIRDIACGSSHS 2206



 Score = 43.5 bits (101), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 77/152 (50%), Gaps = 9/152 (5%)

Query: 324  FGWGL--YGQCG--QGSTDDELSP-NCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            +GWG    GQ G  +G+     +P   +S+L  +Q+ G    L+    +++DG VYA G 
Sbjct: 3034 YGWGHNHRGQLGGIEGAKVKIPTPCEALSTLRPVQLVGGEQTLF---AVTADGKVYATGY 3090

Query: 379  NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
               G+LG GG  +  +P LL++     +   +V+ G +H   ++ D  V+ WG    G+L
Sbjct: 3091 GAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGDDGKL 3150

Query: 439  GLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            G G+ +    P  +  ++G    ++ACG  H+
Sbjct: 3151 GHGNRLACETPKLIEALQGYEIIDIACGGAHS 3182


>gi|329663335|ref|NP_001193010.1| E3 ubiquitin-protein ligase HERC2 [Bos taurus]
 gi|296490789|tpg|DAA32902.1| TPA: hect domain and RLD 3-like [Bos taurus]
          Length = 4837

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 122/251 (48%), Gaps = 32/251 (12%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            ++   V +GG+H LALS  G+V+ WG   +G+LG G+R          PC       DR 
Sbjct: 4042 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR---------SPC-------DRP 4085

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
              +             + G  V  +A GG HSA +T AG L T+G G YG+ G   ++D+
Sbjct: 4086 RVIE-----------SLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQ 4134

Query: 341  LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V +L G ++  VA  +G   T+C++ D  V+++G   +G+LG GG     +P  +
Sbjct: 4135 LKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKI 4194

Query: 399  DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGC 457
            D  SL  +    V CG++ +  +   G V+ WG   Y +LG G       P QV  ++G 
Sbjct: 4195 D--SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGK 4252

Query: 458  VPRNVACGWWH 468
                +A G  H
Sbjct: 4253 KVIAIATGSLH 4263



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 129/255 (50%), Gaps = 29/255 (11%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           V+IA   + G H LAL+  G+V+ WG G  G+LG G  +     P   P + S++   ++
Sbjct: 497 VKIAA-HSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 550

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                             G +V  IACG  +SA IT  G L T+G G YG+ G GS++DE
Sbjct: 551 ------------------GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 592

Query: 341 LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
             P  V+ L G+++  VA  +G   T+ ++ +G V+++G   +G+LG GG      P+L+
Sbjct: 593 AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLI 652

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGC 457
           +   L+++    V CG++ +  +  DG+V+ WG     +LG G       P  +  ++G 
Sbjct: 653 E--KLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGK 710

Query: 458 VPRNVACGWWHTLLL 472
              +VA G  H L L
Sbjct: 711 KVIDVAAGSTHCLAL 725



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 128/303 (42%), Gaps = 80/303 (26%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GGRH  AL+  G+V+ WG G +G+LG  SR+     P  I  +++   +D  
Sbjct: 3048 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRD-- 3104

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                    IACG  HSA +T +G L T+G G YG+ G G    +
Sbjct: 3105 ------------------------IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ 3140

Query: 341  LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V  LLG ++  VA G     T+ ++ +G V+++G   FG+LG GG +   +P+ +
Sbjct: 3141 LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNI 3200

Query: 399  DAPSLE------------------------------------NVHSKS------------ 410
            +  + +                                    +VH +             
Sbjct: 3201 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI 3260

Query: 411  --VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWW 467
              V+ GA H   + D G+V+ WG N +GQ G G       P+ V  +EG     VACG  
Sbjct: 3261 VHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3320

Query: 468  HTL 470
            H++
Sbjct: 3321 HSV 3323



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 133/328 (40%), Gaps = 66/328 (20%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V   +G  HC+A++  GEVY+WG  E         D   G G ++   +R    + E + 
Sbjct: 4045 VAVNSGGKHCLALSSEGEVYSWGEAE---------DGKLGHG-NRSPCDRPR--VIESLR 4092

Query: 161  PRSQVSRSSGGTSSG-TDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
                V  ++GG  S      G      K R   L    +E            P LV    
Sbjct: 4093 GTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLK--------PKLVEALQ 4144

Query: 220  GVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
            G R+  VA  +G   TL L+D   VW WG G  G+LG G                   G 
Sbjct: 4145 GHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-------------------GS 4185

Query: 278  DRSAALSRGSVNSEGPGFRVPGNY-------VKGIACGGRHSAVITDAGALLTFGWGLYG 330
            D               G +VP          V  + CG + S  +T +GA+ T+G G Y 
Sbjct: 4186 D---------------GCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4230

Query: 331  QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            + G GS D    P  V  L G ++  +A G  H +C S DG+VY +G N  GQLG G   
Sbjct: 4231 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTN 4290

Query: 391  AETLPRLLDAPSLENVHSKSVSCGARHT 418
            A   PRL+ A  L+      V+CG+ HT
Sbjct: 4291 AIQRPRLVAA--LQGKKVNRVACGSAHT 4316



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 111/399 (27%), Positives = 165/399 (41%), Gaps = 60/399 (15%)

Query: 55   GFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVT 114
            G   A +   K+  WG  +D  Q     G   ++P      +  ++V+ A G     AVT
Sbjct: 2951 GLESAATIRTKVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT 3009

Query: 115  EGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG--- 171
              G+VY  G      +GR+   +S+GT        RQ + L+  V  +  V+  SGG   
Sbjct: 3010 VEGKVYACGE---ATNGRLGLGISSGTV----PIPRQITALSSYVVKK--VAVHSGGRHA 3060

Query: 172  TSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVA 227
            T+   DG+    G G++G         K    S  + D+     P L+      RI  +A
Sbjct: 3061 TALTVDGKVFSWGEGDDG---------KLGHFSRMNCDK-----PRLIEALKTKRIRDIA 3106

Query: 228  AGGRHTLALSDIGQVWGWGYGGEGQLGLGS-----RIRMVSSPHPIPCIESSYGKDRSAA 282
             G  H+ AL+  G+++ WG G  G+LG G      + +MV        I+ + G   +  
Sbjct: 3107 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 3166

Query: 283  LS---RGSVNSEGPG-------------------FRVPGNYVKGIACGGRHSAVITDAGA 320
            L+    G V S G G                    R+ G  V  I CG + S  +T +G 
Sbjct: 3167 LALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGV 3226

Query: 321  LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
            + T+G G Y + G GS      P  V  L G +I  VA G  H + ++  G VYA+G N 
Sbjct: 3227 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDND 3286

Query: 381  FGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
             GQ G G       P L+    LE      V+CG+ H+ 
Sbjct: 3287 HGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 3323



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 69/270 (25%), Positives = 123/270 (45%), Gaps = 46/270 (17%)

Query: 233  TLALSDIGQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAALSRG---- 286
            TL+    G ++GWG+   GQLG   G+++++     P PC   +    R   L  G    
Sbjct: 3948 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKV-----PTPC--EALAALRPVQLIGGEQTL 4000

Query: 287  -SVNSEGPGF-------------------------RVPGNYVKGIAC--GGRHSAVITDA 318
             +V ++G  +                          +   ++K +A   GG+H   ++  
Sbjct: 4001 FAVTADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4060

Query: 319  GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            G + ++G    G+ G G+      P  + SL G ++  VAAG  H+ C+++ GD+Y +G 
Sbjct: 4061 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGK 4120

Query: 379  NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGA--RHTAVIADDGKVFCWGWNKYG 436
             ++G+LG    + +  P+L++A  L+      V+CG+    T  + DD  V+ WG   YG
Sbjct: 4121 GRYGRLGHSDSEDQLKPKLVEA--LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYG 4178

Query: 437  QLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
            +LG G      +P ++ ++ G     V CG
Sbjct: 4179 KLGRGGSDGCKVPMKIDSLTGLGVVKVECG 4208



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 93/217 (42%), Gaps = 38/217 (17%)

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
           SS DE   A P LV    G+++  VA  +G   TLA+++ GQVW WG G  G+LG G   
Sbjct: 588 SSEDE---AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG--- 641

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITD 317
                                     GS   + P    ++    V  + CG + S  +T 
Sbjct: 642 --------------------------GSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTK 675

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
            G + ++G G   + G G+ +    P  +  L G ++  VAAG  H + ++ D +V+++G
Sbjct: 676 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
            N   Q        +  P  L  P L+  H   ++CG
Sbjct: 736 SNDQCQHFDTLRVTKPEPSAL--PGLDTKHIVGIACG 770



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 70/276 (25%), Positives = 120/276 (43%), Gaps = 48/276 (17%)

Query: 205  DENLSAFPCLVTLNP---------GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG- 254
            +E+++A P L + N          G  I   AAG      +    +V+ WG   + QLG 
Sbjct: 2918 EEDMAAVPFLASDNEEEEDEKGNSGSLIRKKAAGLESAATIR--TKVFVWGLNDKDQLGG 2975

Query: 255  -LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSA 313
              GS+I++            S+ +  SA                  N V+ +A G +   
Sbjct: 2976 LKGSKIKV-----------PSFSETLSAL-----------------NVVQ-VAGGSKSLF 3006

Query: 314  VITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVA--AGLWHTICISSD 370
             +T  G +   G    G+ G G +   +  P  +++L    ++ VA  +G  H   ++ D
Sbjct: 3007 AVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVD 3066

Query: 371  GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
            G V+++G    G+LG         PRL++A  L+    + ++CG+ H+A +   G+++ W
Sbjct: 3067 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEA--LKTKRIRDIACGSSHSAALTSSGELYTW 3124

Query: 431  GWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACG 465
            G  +YG+LG GD   +  P  V +  G     VACG
Sbjct: 3125 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3160



 Score = 39.7 bits (91), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 34/73 (46%), Gaps = 5/73 (6%)

Query: 53   GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
            G  F++A++ S  + TWG  D   LG     S  H   P          ++  A G  HC
Sbjct: 4208 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRRPRQVQGLQGKKVIAIATGSLHC 4264

Query: 111  VAVTEGGEVYTWG 123
            V  +E GEVYTWG
Sbjct: 4265 VCCSEDGEVYTWG 4277



 Score = 39.7 bits (91), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 72/149 (48%), Gaps = 3/149 (2%)

Query: 324  FGWGL--YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
            +GWG    GQ G         P    +L  ++   +  G      +++DG +YA G    
Sbjct: 3958 YGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGYGAG 4017

Query: 382  GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
            G+LG GG ++ + P LL++     +   +V+ G +H   ++ +G+V+ WG  + G+LG G
Sbjct: 4018 GRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG 4077

Query: 442  DVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            +    + P  + ++ G    +VA G  H+
Sbjct: 4078 NRSPCDRPRVIESLRGTEVVDVAAGGAHS 4106


>gi|383861352|ref|XP_003706150.1| PREDICTED: uncharacterized protein LOC100881287 [Megachile rotundata]
          Length = 1884

 Score =  110 bits (276), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 71/211 (33%), Positives = 108/211 (51%), Gaps = 32/211 (15%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V + +V+ G  HTLA+++ G V+ WG    GQLGLG +I   S+P  I  +      D  
Sbjct: 873  VEVLSVSCGHCHTLAVTNNG-VYAWGSSRFGQLGLG-KILQCSTPELITYLAQEVIIDA- 929

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                            V G Y         HS  +T  G + T+GWG++GQ G G+TD +
Sbjct: 930  ----------------VAGQY---------HSVALTADGRVFTWGWGVHGQLGHGNTDKK 964

Query: 341  LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
            + P  ++SLLG  I  ++AG  HT+ +S++G VYAFG N FGQLG G +   ++P  +  
Sbjct: 965  IVPTLITSLLGTVIRYISAGHAHTLALSTEGIVYAFGCNIFGQLGVGSNVKSSVPIKVLL 1024

Query: 401  PSLENVHSKSVSCGARHTAVIADDGKVFCWG 431
            P  E +    ++ G  H   ++   K++ WG
Sbjct: 1025 P--EKIF--LITTGYFHNLAVSYTNKLYVWG 1051



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 66/253 (26%), Positives = 113/253 (44%), Gaps = 39/253 (15%)

Query: 226  VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
            + AG  H + + + G V+ WG   +G LG G  +     P  I                 
Sbjct: 824  LCAGFSHVVLIRN-GNVYTWGSSVQGCLGTGPSVLRYGPPQAISF--------------- 867

Query: 286  GSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWG--LYGQCGQGSTDDELSP 343
                     F++    V  ++CG  H+  +T+ G    + WG   +GQ G G      +P
Sbjct: 868  ---------FKIMEVEVLSVSCGHCHTLAVTNNG---VYAWGSSRFGQLGLGKILQCSTP 915

Query: 344  NCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSL 403
              ++ L    I    AG +H++ +++DG V+ +G    GQLG G    + +P L+   SL
Sbjct: 916  ELITYLAQEVIIDAVAGQYHSVALTADGRVFTWGWGVHGQLGHGNTDKKIVPTLIT--SL 973

Query: 404  ENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRN-- 461
                 + +S G  HT  ++ +G V+ +G N +GQLG+G     N+ S V I+  +P    
Sbjct: 974  LGTVIRYISAGHAHTLALSTEGIVYAFGCNIFGQLGVGS----NVKSSVPIKVLLPEKIF 1029

Query: 462  -VACGWWHTLLLA 473
             +  G++H L ++
Sbjct: 1030 LITTGYFHNLAVS 1042



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 69/279 (24%), Positives = 114/279 (40%), Gaps = 55/279 (19%)

Query: 105  AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFL----TEQVS 160
            AG++H V +   G VYTWG         V G L TG  + +    +  SF      E +S
Sbjct: 826  AGFSHVVLI-RNGNVYTWG-------SSVQGCLGTGPSVLRYGPPQAISFFKIMEVEVLS 877

Query: 161  PRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPG 220
                   +   T++G    GS   G    ++ L K    S+          P L+T    
Sbjct: 878  VSCGHCHTLAVTNNGVYAWGSSRFG----QLGLGKILQCST----------PELITYLAQ 923

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
              I    AG  H++AL+  G+V+ WG+G  GQLG G+  + +     +P + +S      
Sbjct: 924  EVIIDAVAGQYHSVALTADGRVFTWGWGVHGQLGHGNTDKKI-----VPTLITS------ 972

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                            + G  ++ I+ G  H+  ++  G +  FG  ++GQ G GS    
Sbjct: 973  ----------------LLGTVIRYISAGHAHTLALSTEGIVYAFGCNIFGQLGVGSNVKS 1016

Query: 341  LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN 379
              P  +  LL  +I  +  G +H + +S    +Y +G +
Sbjct: 1017 SVP--IKVLLPEKIFLITTGYFHNLAVSYTNKLYVWGAS 1053



 Score = 48.9 bits (115), Expect = 0.006,   Method: Composition-based stats.
 Identities = 60/201 (29%), Positives = 83/201 (41%), Gaps = 34/201 (16%)

Query: 68   TWGSTDD----LGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
            TWGS+       G S +  G    I   F    E  ++  + G  H +AVT  G VY WG
Sbjct: 841  TWGSSVQGCLGTGPSVLRYGPPQAIS--FFKIMEVEVLSVSCGHCHTLAVTNNG-VYAWG 897

Query: 124  WKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGR---- 179
                  S R FG L  G  L     E   ++L ++V   + V+      +   DGR    
Sbjct: 898  ------SSR-FGQLGLGKILQCSTPEL-ITYLAQEVIIDA-VAGQYHSVALTADGRVFTW 948

Query: 180  GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDI 239
            G G  G                  G+ +    P L+T   G  I  ++AG  HTLALS  
Sbjct: 949  GWGVHGQL--------------GHGNTDKKIVPTLITSLLGTVIRYISAGHAHTLALSTE 994

Query: 240  GQVWGWGYGGEGQLGLGSRIR 260
            G V+ +G    GQLG+GS ++
Sbjct: 995  GIVYAFGCNIFGQLGVGSNVK 1015



 Score = 46.2 bits (108), Expect = 0.035,   Method: Composition-based stats.
 Identities = 88/392 (22%), Positives = 144/392 (36%), Gaps = 82/392 (20%)

Query: 14   VFMWGY-LPGALPQRS---PILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITW 69
            VF WG+ + G L   +    I+  L+  L   +G+  R +  G     +A+S    +  +
Sbjct: 945  VFTWGWGVHGQLGHGNTDKKIVPTLITSL---LGTVIRYISAGH-AHTLALSTEGIVYAF 1000

Query: 70   GSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVP 129
            G  +  GQ  V S     +P    LP +  ++    G+ H +AV+   ++Y WG      
Sbjct: 1001 G-CNIFGQLGVGSNVKSSVPIKVLLPEKIFLI--TTGYFHNLAVSYTNKLYVWG-----A 1052

Query: 130  SGRVFGDLSTGTGLDKDVFERQSSFLT--EQVSPRSQVSRSSGGTSSGTDGRGSGEEGSK 187
            S +V   L   T     + E++ + +   E +    +V   +       D      E + 
Sbjct: 1053 SPQVL-RLQAQTQKRARILEQRDNIIKQFENIDEFEKVPDQA----CTNDTSEEVSESNA 1107

Query: 188  RRRISLAKQTAESSSSGDENLSAFPCLVTLNPG------------------VR--IATVA 227
            + + +  KQT  S S   +      CL  +N G                  VR  I  ++
Sbjct: 1108 QNKNAQVKQTESSYSDSRKKQLDNVCLKNVNVGSIEEAQTHLKPTVVDTSLVRGDIIQIS 1167

Query: 228  AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHP-----------IPCIESSYG 276
            AG  H   ++  G ++ WG   +GQ+G GSR R V  P P           +P   +S+ 
Sbjct: 1168 AGCHHNALVTKDGSLYTWGRNLDGQIGNGSR-REVPIPTPLCYNPASIFAQVPPRHNSHR 1226

Query: 277  KDRSAALSRGSVNSEGPGFRVPGN---------------------YVKGIACGGRHSAVI 315
            +D    L  G  NS        GN                        GI CG  ++  +
Sbjct: 1227 RDEEQELDGGMKNSGNSEKNGNGNDEAKSSPAESSESREKINPIIKTVGIYCGYDYTVAV 1286

Query: 316  TDAGALLTFGWGLYGQCGQ------GSTDDEL 341
               G +L +G     Q G+        TDD+L
Sbjct: 1287 QPGGTVLAWGNNSRAQLGRLPAKDTRDTDDKL 1318


>gi|195399111|ref|XP_002058164.1| GJ15642 [Drosophila virilis]
 gi|194150588|gb|EDW66272.1| GJ15642 [Drosophila virilis]
          Length = 5062

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 91/306 (29%), Positives = 135/306 (44%), Gaps = 80/306 (26%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GG+H LAL+  G+V+ WG G +G+LG G+R+              SY  DR 
Sbjct: 4286 VKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRM--------------SY--DRP 4329

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
              L             + G  V  IACG  HSA IT +G +LT+G G YG+ G G ++D+
Sbjct: 4330 KLLEH-----------LNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQ 4378

Query: 341  LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V +LLG +   +A  +G   T+CI+ D +V+++G   +G+LG GG     LP  +
Sbjct: 4379 LRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKI 4438

Query: 399  DA--------------------------------------------------PSLENVHS 408
            ++                                                   +L+    
Sbjct: 4439 ESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKI 4498

Query: 409  KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWW 467
             S++ G+ H    +D G+V+ WG N  GQLG G V     P  V  ++G     V CG  
Sbjct: 4499 ISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSA 4558

Query: 468  HTLLLA 473
            HTL L+
Sbjct: 4559 HTLALS 4564



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 138/283 (48%), Gaps = 30/283 (10%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI-----RMVSSPHPIPCIESSY 275
            V+   V +GG+H LAL+  G+V+ WG G +G+LG G+R      R+V +       + + 
Sbjct: 3132 VKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRSTLDKPRLVEALRAKKIRDIAC 3191

Query: 276  GKDRSAALS-RGSVNSEGPG-------------------FRVPGNYVKGIACGGR--HSA 313
            G   SAA+S +G + + G G                     + G  V  +ACG R   + 
Sbjct: 3192 GSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVTALHGRRVIQVACGSRDAQTL 3251

Query: 314  VITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDV 373
             +T+ GA+ ++G G +G+ G+G ++   +P+ +  L GI +  +  G   ++ ++  G+V
Sbjct: 3252 ALTEDGAVFSWGDGDFGKLGRGGSEGSATPHEIERLSGIGVIQIECGAQFSLALTRAGEV 3311

Query: 374  YAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWN 433
            + +G   + +LG GGDQ    P+ +    L       V+ GA H   + D G+V+ WG N
Sbjct: 3312 WTWGKGDYYRLGHGGDQHVRKPQPI--AGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDN 3369

Query: 434  KYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLAVP 475
             +GQ G G+      P+ V  ++      VACG  H++   +P
Sbjct: 3370 DHGQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSMAWGLP 3412



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 96/324 (29%), Positives = 136/324 (41%), Gaps = 50/324 (15%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V   +G  HC+A+T  GEVY WG  E        G L  G  +  D        L E ++
Sbjct: 4289 VAVNSGGKHCLALTTDGEVYAWGEGE-------DGKLGHGNRMSYD-----RPKLLEHLN 4336

Query: 161  PRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPG 220
              S V+  + G++       SG        ++  K        GD      P LV    G
Sbjct: 4337 GMS-VADIACGSAHSAAITASGHV------LTWGKGRYGRLGHGDSEDQLRPKLVEALLG 4389

Query: 221  VRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
             R   +A  +G   TL ++D   VW WG G  G+LG G      S    +P     Y  +
Sbjct: 4390 YRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGG-----SDGCKLP-----YKIE 4439

Query: 279  RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
              A L                  V  + CG + S  +T +GA+ T+G G + + G GS D
Sbjct: 4440 SLAGLG-----------------VIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVD 4482

Query: 339  DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
                P  V++L G +I  +A G  H +  S  G+VY +G N  GQLG G   A   PRL+
Sbjct: 4483 HVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQRPRLV 4542

Query: 399  DAPSLENVHSKSVSCGARHTAVIA 422
             A  L+  H   V+CG+ HT  ++
Sbjct: 4543 AA--LQGKHIVKVTCGSAHTLALS 4564



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 106/223 (47%), Gaps = 29/223 (13%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            +R   +A G +    +S  G+V+  G G  G+LGLG     V  PH +P +     K   
Sbjct: 3078 LRPIHIAGGSKSLFVVSQDGKVYACGEGTNGRLGLGV-THNVPLPHQLPVLHQYVVK--- 3133

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                + +V+S                 GG+H+  +T  G + ++G G  G+ G G+    
Sbjct: 3134 ----KVAVHS-----------------GGKHALALTLDGKVFSWGEGEDGKLGHGNRSTL 3172

Query: 341  LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
              P  V +L   +I  +A G  H+  ISS G++Y +G  ++G+LG G +  +  P+L+ A
Sbjct: 3173 DKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVTA 3232

Query: 401  PSLENVHSKSVSCGAR--HTAVIADDGKVFCWGWNKYGQLGLG 441
              L       V+CG+R   T  + +DG VF WG   +G+LG G
Sbjct: 3233 --LHGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRG 3273



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 111/387 (28%), Positives = 160/387 (41%), Gaps = 75/387 (19%)

Query: 56   FAMAISDSRKLITWGSTDDL------GQSYV----TSGKHG-----EIPEPFPLPT-EAS 99
            F+  IS  R +   G +  L      G+ Y     T+G+ G      +P P  LP     
Sbjct: 3071 FSQTISRLRPIHIAGGSKSLFVVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQY 3130

Query: 100  IVKAAA---GWAHCVAVTEGGEVYTWGWKECVPSGRV-FGDLSTGTGLDKDVFERQSSFL 155
            +VK  A   G  H +A+T  G+V++WG  E    G++  G+ ST   LDK       +  
Sbjct: 3131 VVKKVAVHSGGKHALALTLDGKVFSWGEGE---DGKLGHGNRST---LDKPRLV--EALR 3182

Query: 156  TEQVSPRSQVSRSSGGTSSGTDGR--GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPC 213
             +++   +  S  S   SS  +    G GE G                  GD      P 
Sbjct: 3183 AKKIRDIACGSSHSAAISSQGELYTWGLGEYGRL--------------GHGDNATQLKPK 3228

Query: 214  LVTLNPGVRIATVAAGGR--HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
            LVT   G R+  VA G R   TLAL++ G V+ WG G  G+LG G      ++PH I   
Sbjct: 3229 LVTALHGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGS-EGSATPHEIE-- 3285

Query: 272  ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
                                    R+ G  V  I CG + S  +T AG + T+G G Y +
Sbjct: 3286 ------------------------RLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYR 3321

Query: 332  CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
             G G       P  ++ L G ++  VA G  H + ++  G VYA+G N  GQ G+G    
Sbjct: 3322 LGHGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFV 3381

Query: 392  ETLPRLLDAPSLENVHSKSVSCGARHT 418
               P L+    L+ V    V+CG+ H+
Sbjct: 3382 NKKPALVIG--LDAVFVNRVACGSSHS 3406



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 117/259 (45%), Gaps = 57/259 (22%)

Query: 230 GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVN 289
           GRH LA+      + WG G   +LG G             C          + + R    
Sbjct: 626 GRHFLAVDSNHNAYSWGVGDSRRLGHGD------------CHARELPTKIESLVRR---- 669

Query: 290 SEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSL 349
                       V+ + CG  +SA IT  G L T+G G YG+ G G++DD+  P  V +L
Sbjct: 670 ------------VQSVYCGCSYSAAITLRGNLYTWGRGTYGRLGHGNSDDQCMPAMVMAL 717

Query: 350 LGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA-PSLENV 406
              Q+  VA  +G  HT+C++  G VYA+G   +G+LG G   +   P L++  P ++ V
Sbjct: 718 KDHQVLDVALGSGDAHTLCLTRGGLVYAWGDGDYGKLGNGSCNSSLQPLLIECLPRVQRV 777

Query: 407 HSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC-VPR----- 460
            +     G++ +  +  +G+++ WG  K   LG   +++RN      ++GC VPR     
Sbjct: 778 FA-----GSQFSLALTCEGQLYSWG--KASCLG-HQLVERN------VQGCSVPRLITSL 823

Query: 461 ------NVACGWWHTLLLA 473
                 +VA G  H L L+
Sbjct: 824 QHKRIVHVAVGVAHCLALS 842



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 132/345 (38%), Gaps = 60/345 (17%)

Query: 24   LPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDD--LGQSYVT 81
            LP + P+L   VV+         +     G   A+A++   K+ +WG  +D  LG    +
Sbjct: 3120 LPHQLPVLHQYVVK---------KVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRS 3170

Query: 82   SGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGT 141
            +     + E         I   A G +H  A++  GE+YTWG  E    GR  G     T
Sbjct: 3171 TLDKPRLVEAL---RAKKIRDIACGSSHSAAISSQGELYTWGLGE---YGR-LGHGDNAT 3223

Query: 142  GLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGR-GSGEEGSKRRRISLAKQTAES 200
             L   +          QV+  S+ +++   T  G     G G+ G   R           
Sbjct: 3224 QLKPKLVTALHGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGR----------- 3272

Query: 201  SSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR 260
               G    SA P  +    G+ +  +  G + +LAL+  G+VW WG G   +LG G   +
Sbjct: 3273 ---GGSEGSATPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGD-Q 3328

Query: 261  MVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA 320
             V  P PI                         G R  G  V  +A G  H   +TDAG 
Sbjct: 3329 HVRKPQPIA------------------------GLR--GRRVIHVAVGALHCLAVTDAGQ 3362

Query: 321  LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTI 365
            +  +G   +GQ G G+T     P  V  L  + +  VA G  H++
Sbjct: 3363 VYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSM 3407



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 111/255 (43%), Gaps = 34/255 (13%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
           R+ +V  G  ++ A++  G ++ WG G  G+LG G+     S    +P +  +    +  
Sbjct: 669 RVQSVYCGCSYSAAITLRGNLYTWGRGTYGRLGHGN-----SDDQCMPAMVMALKDHQVL 723

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL 341
            ++ GS                    G  H+  +T  G +  +G G YG+ G GS +  L
Sbjct: 724 DVALGS--------------------GDAHTLCLTRGGLVYAWGDGDYGKLGNGSCNSSL 763

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF--GQLGTGGDQAETLPRLLD 399
            P  +  L  +Q   V AG   ++ ++ +G +Y++G       QL     Q  ++PRL+ 
Sbjct: 764 QPLLIECLPRVQ--RVFAGSQFSLALTCEGQLYSWGKASCLGHQLVERNVQGCSVPRLIT 821

Query: 400 APSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNI---PSQVTIEG 456
             SL++     V+ G  H   ++ +G++F WG N   Q+    V    +   P QVT+  
Sbjct: 822 --SLQHKRIVHVAVGVAHCLALSSNGEIFGWGRNDNQQICPASVCSEPLLRQPIQVTLPT 879

Query: 457 CVPRNVACGWWHTLL 471
                +AC    +L+
Sbjct: 880 MPASGMACTAVQSLI 894



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 69/154 (44%), Gaps = 4/154 (2%)

Query: 307 CGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC 366
           C GRH   +       ++G G   + G G       P  + SL+  +++ V  G  ++  
Sbjct: 624 CEGRHFLAVDSNHNAYSWGVGDSRRLGHGDCHARELPTKIESLVR-RVQSVYCGCSYSAA 682

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           I+  G++Y +G   +G+LG G    + +P ++ A     V   ++  G  HT  +   G 
Sbjct: 683 ITLRGNLYTWGRGTYGRLGHGNSDDQCMPAMVMALKDHQVLDVALGSGDAHTLCLTRGGL 742

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPR 460
           V+ WG   YG+LG G     N   Q  +  C+PR
Sbjct: 743 VYAWGDGDYGKLGNGSC---NSSLQPLLIECLPR 773



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 87/229 (37%), Gaps = 42/229 (18%)

Query: 38  LPLTVGSAWRDV--CGGGCGFAMAISDSRKLITWG-----------STDDLGQSYVTSGK 84
           LP  + S  R V     GC ++ AI+    L TWG           S D    + V + K
Sbjct: 659 LPTKIESLVRRVQSVYCGCSYSAAITLRGNLYTWGRGTYGRLGHGNSDDQCMPAMVMALK 718

Query: 85  HGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLD 144
             ++ +          V   +G AH + +T GG VY WG  +       +G L  G+   
Sbjct: 719 DHQVLD----------VALGSGDAHTLCLTRGGLVYAWGDGD-------YGKLGNGSC-- 759

Query: 145 KDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSG 204
                  SS     +    +V R   G+         G+  S  +   L  Q  E +  G
Sbjct: 760 ------NSSLQPLLIECLPRVQRVFAGSQFSLALTCEGQLYSWGKASCLGHQLVERNVQG 813

Query: 205 DENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQL 253
                + P L+T     RI  VA G  H LALS  G+++GWG     Q+
Sbjct: 814 ----CSVPRLITSLQHKRIVHVAVGVAHCLALSSNGEIFGWGRNDNQQI 858



 Score = 47.0 bits (110), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 81/159 (50%), Gaps = 13/159 (8%)

Query: 319  GALLTFGWGL--YGQCG--QGSTDDELSP-NCVSSLLGIQIEGVAAGLWHTICISSDGDV 373
            GA   +GWG    GQ G  +GS     +P   +S L  IQ+ G    L+    ++ DG +
Sbjct: 4197 GASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPIQLAGGEQSLF---AVTPDGKL 4253

Query: 374  YAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSC--GARHTAVIADDGKVFCWG 431
            +A G    G+LG GG  +  +P LL   SL++V  K V+   G +H   +  DG+V+ WG
Sbjct: 4254 FATGYGSGGRLGVGGSDSWAIPTLLG--SLQHVFVKKVAVNSGGKHCLALTTDGEVYAWG 4311

Query: 432  WNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHT 469
              + G+LG G+ +  + P  +  + G    ++ACG  H+
Sbjct: 4312 EGEDGKLGHGNRMSYDRPKLLEHLNGMSVADIACGSAHS 4350


>gi|194893471|ref|XP_001977881.1| GG19286 [Drosophila erecta]
 gi|190649530|gb|EDV46808.1| GG19286 [Drosophila erecta]
          Length = 4908

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 134/306 (43%), Gaps = 80/306 (26%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GG+H LAL+  G+V+ WG G +G+LG G+R+              SY + + 
Sbjct: 4132 VKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRM--------------SYDRPKL 4177

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                            + G  V  IACG  HSA IT +G +LT+G G YG+ G G ++D+
Sbjct: 4178 VE-------------HLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQ 4224

Query: 341  LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V +LLG +   +A  +G   T+CI+ D +V+++G   +G+LG GG     LP  +
Sbjct: 4225 LRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKI 4284

Query: 399  DA--------------------------------------------------PSLENVHS 408
            ++                                                   +L+    
Sbjct: 4285 ESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKI 4344

Query: 409  KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWW 467
             S++ G+ H    +D G+V+ WG N  GQLG G V     P  V  ++G     V CG  
Sbjct: 4345 ISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSA 4404

Query: 468  HTLLLA 473
            HTL L+
Sbjct: 4405 HTLALS 4410



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 121/255 (47%), Gaps = 36/255 (14%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GG+H LAL+  G+V+ WG G +G+LG G+R              ++  K R 
Sbjct: 3070 VKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNR--------------TTLDKPRL 3115

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                R                ++ +ACG  HSA I+  G L T+G G YG+ G G    +
Sbjct: 3116 VEALR-------------AKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNVTQ 3162

Query: 341  LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V +L G ++  VA G     T+ ++ DG V+++G   FG+LG GG +    P  +
Sbjct: 3163 LKPKLVVALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEI 3222

Query: 399  DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCV 458
            +   L  +    + CGA+ +  +   G+V+ WG   Y +LG G   D+++     I G  
Sbjct: 3223 E--RLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGG--DQHVRKPQPIGGLR 3278

Query: 459  PR---NVACGWWHTL 470
             R   +VA G  H L
Sbjct: 3279 GRRVIHVAVGALHCL 3293



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 96/324 (29%), Positives = 136/324 (41%), Gaps = 50/324 (15%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V   +G  HC+A+T  GEVY WG  E        G L  G  +  D        L E ++
Sbjct: 4135 VAVNSGGKHCLALTTEGEVYAWGEGE-------DGKLGHGNRMSYD-----RPKLVEHLN 4182

Query: 161  PRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPG 220
              S V+  + G++       SG        ++  K        GD      P LV    G
Sbjct: 4183 GMS-VADIACGSAHSAAITASGHV------LTWGKGRYGRLGHGDSEDQLRPKLVEALLG 4235

Query: 221  VRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
             R   +A  +G   TL ++D   VW WG G  G+LG G      S    +P     Y  +
Sbjct: 4236 YRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGG-----SDGCKLP-----YKIE 4285

Query: 279  RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
              A L                  V  + CG + S  +T +GA+ T+G G + + G GS D
Sbjct: 4286 SLAGLG-----------------VVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVD 4328

Query: 339  DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
                P  V++L G +I  +A G  H +  S  G+VY +G N  GQLG G   A   PRL+
Sbjct: 4329 HVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLV 4388

Query: 399  DAPSLENVHSKSVSCGARHTAVIA 422
             A  L+  H   V+CG+ HT  ++
Sbjct: 4389 AA--LQGKHIVKVTCGSAHTLALS 4410



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 118/255 (46%), Gaps = 30/255 (11%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            +R   +A G +    +S  G+V+  G G  G+LGLG     V  PH +P +     K   
Sbjct: 3016 LRPIHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLGV-THNVPLPHQLPVLHQYVVK--- 3071

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                + +V+S                 GG+H+  +T  G + ++G G  G+ G G+    
Sbjct: 3072 ----KVAVHS-----------------GGKHALALTLDGKVFSWGEGEDGKLGHGNRTTL 3110

Query: 341  LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
              P  V +L   +I  VA G  H+  ISS G++Y +G  ++G+LG G +  +  P+L+ A
Sbjct: 3111 DKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNVTQLKPKLVVA 3170

Query: 401  PSLENVHSKSVSCGAR--HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGC 457
              L       V+CG+R   T  + +DG VF WG   +G+LG G     + P ++  + G 
Sbjct: 3171 --LAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGI 3228

Query: 458  VPRNVACGWWHTLLL 472
                + CG   +L L
Sbjct: 3229 GVVQIECGAQFSLAL 3243



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 108/386 (27%), Positives = 151/386 (39%), Gaps = 73/386 (18%)

Query: 56   FAMAISDSRKLITWGSTDDL------GQSYV----TSGKHG-----EIPEPFPLPT-EAS 99
            F+  IS  R +   G +  L      G+ Y     T+G+ G      +P P  LP     
Sbjct: 3009 FSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQY 3068

Query: 100  IVKAAA---GWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLT 156
            +VK  A   G  H +A+T  G+V++WG  E        G L  G     D      +   
Sbjct: 3069 VVKKVAVHSGGKHALALTLDGKVFSWGEGE-------DGKLGHGNRTTLDKPRLVEALRA 3121

Query: 157  EQVSPRSQVSRSSGGTSSGTDGR--GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCL 214
            +++   +  S  S   SS  +    G GE G                  GD      P L
Sbjct: 3122 KKIRDVACGSSHSAAISSQGELYTWGLGEYGRL--------------GHGDNVTQLKPKL 3167

Query: 215  VTLNPGVRIATVAAGGR--HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIE 272
            V    G R+  VA G R   TLAL++ G V+ WG G  G+LG G                
Sbjct: 3168 VVALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG--------------- 3212

Query: 273  SSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQC 332
             S G D    + R S           G  V  I CG + S  +T AG + T+G G Y + 
Sbjct: 3213 -SEGSDTPHEIERLS-----------GIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRL 3260

Query: 333  GQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAE 392
            G G       P  +  L G ++  VA G  H + ++  G VYA+G N  GQ G+G     
Sbjct: 3261 GHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVN 3320

Query: 393  TLPRLLDAPSLENVHSKSVSCGARHT 418
              P L+    L+ V    V+CG+ H+
Sbjct: 3321 KKPALVIG--LDAVFVNRVACGSSHS 3344



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 116/238 (48%), Gaps = 45/238 (18%)

Query: 230 GRHTLALSDIGQVWGWGYGGEGQLGLG-SRIRMVSSPHPIPCIESSYGKDRSAALSRGSV 288
           GRH LA+      + WG G + +LG G +  R V +              + AAL +  V
Sbjct: 622 GRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPT--------------KIAALEQHCV 667

Query: 289 NSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS 348
            S              + CG  +SA IT  G LLT+G G Y + G G++DD   P  V +
Sbjct: 668 QS--------------VYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVA 713

Query: 349 LLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENV 406
           L    +  VA  +G  H++ ++S+G V+A+G   +G+LG G       P L++  SL  V
Sbjct: 714 LSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVE--SLPRV 771

Query: 407 HSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC-VPRNVA 463
             + V  G++ +  ++ +G+++ WG  K   LG   +++R      +++GC VPR V+
Sbjct: 772 --QRVFAGSQFSLALSSEGQLYSWG--KATCLG-HQLVER------SVQGCSVPRLVS 818



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 107/229 (46%), Gaps = 36/229 (15%)

Query: 242  VWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPG 299
            ++GWG+   GQLG   GSRI+      P PC                    E      P 
Sbjct: 4047 IYGWGHNHRGQLGGLEGSRIKT-----PTPC--------------------EALSLLRPV 4081

Query: 300  NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA- 358
                 +A G +    +T  G L   G+G  G+ G G +D    P  + SL  + ++ VA 
Sbjct: 4082 Q----LAGGEQSLFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAV 4137

Query: 359  -AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARH 417
             +G  H + ++++G+VYA+G  + G+LG G   +   P+L++   L  +    ++CG+ H
Sbjct: 4138 NSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVE--HLNGMSVADIACGSAH 4195

Query: 418  TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
            +A I   G V  WG  +YG+LG GD  D+  P  V  + G    ++ACG
Sbjct: 4196 SAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACG 4244



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 87/348 (25%), Positives = 135/348 (38%), Gaps = 66/348 (18%)

Query: 24   LPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDD--LGQSYVT 81
            LP + P+L   VV+         +     G   A+A++   K+ +WG  +D  LG    T
Sbjct: 3058 LPHQLPVLHQYVVK---------KVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRT 3108

Query: 82   SGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGT 141
            +     + E         I   A G +H  A++  GE+YTWG  E       +G L  G 
Sbjct: 3109 TLDKPRLVEAL---RAKKIRDVACGSSHSAAISSQGELYTWGLGE-------YGRLGHGD 3158

Query: 142  GLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQT 197
             + +   +   +    +V   +  SR +   +   DG     G G+ G       L +  
Sbjct: 3159 NVTQLKPKLVVALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFG------KLGRGG 3212

Query: 198  AESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS 257
            +E S +  E        +    G+ +  +  G + +LAL+  G+VW WG G   +LG G 
Sbjct: 3213 SEGSDTPHE--------IERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGG 3264

Query: 258  RIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITD 317
              + V  P PI                         G R  G  V  +A G  H   +TD
Sbjct: 3265 D-QHVRKPQPI------------------------GGLR--GRRVIHVAVGALHCLAVTD 3297

Query: 318  AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTI 365
            AG +  +G   +GQ G G+T     P  V  L  + +  VA G  H+I
Sbjct: 3298 AGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSI 3345



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 63/136 (46%)

Query: 307 CGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC 366
           C GRH   I       ++G G   + G G T     P  +++L    ++ V  G  ++  
Sbjct: 620 CEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAA 679

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           I+  G++  +G   + +LG G     +LP L+ A S   V   ++  G  H+  +  +G 
Sbjct: 680 ITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGL 739

Query: 427 VFCWGWNKYGQLGLGD 442
           VF WG   YG+LG G+
Sbjct: 740 VFAWGDGDYGKLGNGN 755



 Score = 46.6 bits (109), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 13/159 (8%)

Query: 319  GALLTFGWGL--YGQCG--QGSTDDELSP-NCVSSLLGIQIEGVAAGLWHTICISSDGDV 373
            GA   +GWG    GQ G  +GS     +P   +S L  +Q+ G    L+    ++ DG +
Sbjct: 4043 GASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLF---AVTPDGKL 4099

Query: 374  YAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSK--SVSCGARHTAVIADDGKVFCWG 431
            +A G    G+LG GG  +  +P LL   SL++V  K  +V+ G +H   +  +G+V+ WG
Sbjct: 4100 FATGYGSGGRLGVGGSDSWAIPTLLG--SLQHVFVKKVAVNSGGKHCLALTTEGEVYAWG 4157

Query: 432  WNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHT 469
              + G+LG G+ +  + P  V  + G    ++ACG  H+
Sbjct: 4158 EGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHS 4196



 Score = 46.2 bits (108), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 58/223 (26%), Positives = 91/223 (40%), Gaps = 37/223 (16%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           G+ +  + P LV       +  VA  +G  H+LAL+  G V+ WG G  G+LG G+    
Sbjct: 700 GNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGN---C 756

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
             S  PI  +ES         L R                V+ +  G + S  ++  G L
Sbjct: 757 NGSLQPI-LVES---------LPR----------------VQRVFAGSQFSLALSSEGQL 790

Query: 322 LTFGWGLYGQCGQGSTDDELS----PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
             + WG     G    +  +     P  VSSL   +I  VA  + H + +SS G+V+ +G
Sbjct: 791 --YSWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWG 848

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            N   Q+      +E L R     SL    +  ++C +  + V
Sbjct: 849 RNDSQQICPASVSSEPLLRTPILVSLPTFPASGIACTSAQSLV 891



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 1/73 (1%)

Query: 52  GGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHG-EIPEPFPLPTEASIVKAAAGWAHC 110
            G  F++A+S   +L +WG    LG   V     G  +P          IV  A   AHC
Sbjct: 776 AGSQFSLALSSEGQLYSWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHC 835

Query: 111 VAVTEGGEVYTWG 123
           +A++  GEV+ WG
Sbjct: 836 LALSSSGEVFGWG 848



 Score = 43.5 bits (101), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 81/208 (38%), Gaps = 32/208 (15%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGE-----IPEPFPLPTEASIVKAA--A 105
           GC ++ AI+    L+TWG       +Y   G HG      +P      ++  +V  A  +
Sbjct: 673 GCSYSAAITCGGNLLTWGRG-----TYARLG-HGNSDDRSLPTLVVALSDHMVVDVALGS 726

Query: 106 GWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQV 165
           G AH +A+T  G V+ WG  +       +G L  G            S     V    +V
Sbjct: 727 GDAHSLALTSEGLVFAWGDGD-------YGKLGNGNC--------NGSLQPILVESLPRV 771

Query: 166 SRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIAT 225
            R   G+         G+  S  +   L  Q  E S  G     + P LV+     RI  
Sbjct: 772 QRVFAGSQFSLALSSEGQLYSWGKATCLGHQLVERSVQG----CSVPRLVSSLQHKRIVD 827

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQL 253
           VA    H LALS  G+V+GWG     Q+
Sbjct: 828 VAVSVAHCLALSSSGEVFGWGRNDSQQI 855


>gi|330796931|ref|XP_003286517.1| hypothetical protein DICPUDRAFT_97415 [Dictyostelium purpureum]
 gi|325083498|gb|EGC36949.1| hypothetical protein DICPUDRAFT_97415 [Dictyostelium purpureum]
          Length = 815

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 112/457 (24%), Positives = 192/457 (42%), Gaps = 87/457 (19%)

Query: 50  CGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGE--IPEPFPLPTEAS-------- 99
           C  G    + +S    + +WG            GK G+  +PE     T+ +        
Sbjct: 39  CSSGEAHNICVSRFGDVYSWGR-----------GKEGQLGVPEKMLFSTKPNLIKTLLHE 87

Query: 100 -IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGT----GLDKDVFERQSSF 154
            +VK A G  H +A+T+ G VY WG    +   +   + + G     G+ K  ++   S 
Sbjct: 88  RVVKVACGNFHSLALTDQGRVYEWGQLHKIDDSKTGLEATNGLLEMPGMSKPKYQ---SI 144

Query: 155 LTEQVSPRSQVSRSSGGTSSGT---DGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAF 211
           +   VS      +    ++SG    D   S  E SK + I       +++    + L A 
Sbjct: 145 IENSVSQYLNGEKEIYDSTSGNNDDDDEASTSEQSKGKHIGKIIDYNQTTPIQVQGLLA- 203

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
                      +  ++AG   + A++  G+++ WG+  +GQLGL  R    SSP  +  +
Sbjct: 204 --------NEEVIDISAGWAFSAAVTKSGKIFTWGFNEKGQLGLKHR-WFNSSPQLVKTL 254

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
                                         +  ++CG +H   +T+ G L T+G G++GQ
Sbjct: 255 LDV--------------------------KIVSVSCGRQHIGAVTEDGDLYTWGLGVFGQ 288

Query: 332 CGQGSTDDELSPNCVS--SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD 389
            G  +    L P  V+  SL GIQ+  V+ G   T+ +  +  +YAFG  ++ QLG   +
Sbjct: 289 LGHSNVKSYLHPKKVAAFSLNGIQVSQVSCGSNFTMVLGRNQILYAFGHGEYAQLG-ATE 347

Query: 390 QAETL-------------PRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYG 436
           + + L             P++++A  LE+   K V+CG  HT  + +D +V+ WGW   G
Sbjct: 348 ETQHLDMGSRDNHFKYSSPKVVEA--LEDKKIKYVTCGHLHTLALTEDNEVYVWGWGSSG 405

Query: 437 QLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
            LGL     + +P  VT I G     ++ G  H+L++
Sbjct: 406 CLGLNSKRFQLVPQLVTSISGEEISCISAGEKHSLIV 442



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 75/314 (23%), Positives = 136/314 (43%), Gaps = 47/314 (14%)

Query: 204 GDENLSAF--PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           G EN+     P ++    G  I + ++G  H + +S  G V+ WG G EGQLG+  ++  
Sbjct: 15  GIENIKEHLEPKVLESLKGKVIVSCSSGEAHNICVSRFGDVYSWGRGKEGQLGVPEKMLF 74

Query: 262 VSSPHPIP------CIESSYGKDRSAALS-RGSVNSEGPGFRVPGNYVKGIACGG----- 309
            + P+ I        ++ + G   S AL+ +G V   G   ++  +     A  G     
Sbjct: 75  STKPNLIKTLLHERVVKVACGNFHSLALTDQGRVYEWGQLHKIDDSKTGLEATNGLLEMP 134

Query: 310 -----RHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG------------- 351
                ++ ++I ++ +    G         G+ DD+   +      G             
Sbjct: 135 GMSKPKYQSIIENSVSQYLNGEKEIYDSTSGNNDDDDEASTSEQSKGKHIGKIIDYNQTT 194

Query: 352 -IQIEG---------VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
            IQ++G         ++AG   +  ++  G ++ +G N+ GQLG       + P+L+   
Sbjct: 195 PIQVQGLLANEEVIDISAGWAFSAAVTKSGKIFTWGFNEKGQLGLKHRWFNSSPQLV--K 252

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV---TIEGCV 458
           +L +V   SVSCG +H   + +DG ++ WG   +GQLG  +V     P +V   ++ G  
Sbjct: 253 TLLDVKIVSVSCGRQHIGAVTEDGDLYTWGLGVFGQLGHSNVKSYLHPKKVAAFSLNGIQ 312

Query: 459 PRNVACGWWHTLLL 472
              V+CG   T++L
Sbjct: 313 VSQVSCGSNFTMVL 326



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 57/113 (50%), Gaps = 3/113 (2%)

Query: 320 ALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN 379
           ++++ G    GQ G  +  + L P  + SL G  I   ++G  H IC+S  GDVY++G  
Sbjct: 2   SVISVGNNKNGQLGIENIKEHLEPKVLESLKGKVIVSCSSGEAHNICVSRFGDVYSWGRG 61

Query: 380 QFGQLGTGGDQA-ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWG 431
           + GQLG        T P L+     E V    V+CG  H+  + D G+V+ WG
Sbjct: 62  KEGQLGVPEKMLFSTKPNLIKTLLHERV--VKVACGNFHSLALTDQGRVYEWG 112



 Score = 42.7 bits (99), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 8/105 (7%)

Query: 373 VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGW 432
           V + G N+ GQLG    +    P++L+  SL+     S S G  H   ++  G V+ WG 
Sbjct: 3   VISVGNNKNGQLGIENIKEHLEPKVLE--SLKGKVIVSCSSGEAHNICVSRFGDVYSWGR 60

Query: 433 NKYGQLGLGDVI----DRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
            K GQLG+ + +      N+   +  E  V   VACG +H+L L 
Sbjct: 61  GKEGQLGVPEKMLFSTKPNLIKTLLHERVVK--VACGNFHSLALT 103


>gi|330798916|ref|XP_003287495.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
 gi|325082514|gb|EGC35994.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
          Length = 1935

 Score =  110 bits (276), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 104/431 (24%), Positives = 169/431 (39%), Gaps = 97/431 (22%)

Query: 93   PLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDK------- 145
            PL  E   +K + GW H   +T+ GE+YTWG  +        G L  G  ++K       
Sbjct: 1117 PLKNEKKAIKVSCGWDHIAVITDDGELYTWGSNQS-------GQLGHGLEVNKTLSLPKR 1169

Query: 146  -DVFERQSSFLTEQVSPRSQVSRSSGG--TSSGTDGRGSGEEGSKRRRISLAKQTAESSS 202
             D F  +S     +      ++  S     S G+D  G    G+K    S  K   E + 
Sbjct: 1170 VDFFRGKSPIFMVECGGEHTIAVDSNYFVYSWGSDKFGQLGHGTKAVNQSRPKVIEELT- 1228

Query: 203  SGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS----- 257
                             G +I  +AAG  H + L   G+++ +GYG  GQLG GS     
Sbjct: 1229 -----------------GQKIQAIAAGFAHNIVLKKSGELFSFGYGDFGQLGTGSFHSKN 1271

Query: 258  --------------------RIRMVSSP--HPIPCIES----SYGKDRSAALSRGSV-NS 290
                                +I  ++    H + C E+    S+G  +   L      N 
Sbjct: 1272 IPTRIEINAIMGGLQHHDGGKITQIACGFGHSVICSENGEVYSWGLGKQGQLGHKVFENI 1331

Query: 291  EGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLL 350
              P        V  I+CG  H+   TD   + ++G G + + G  S  DE  P  V   +
Sbjct: 1332 SKPRLIETLRGVTKISCGHFHTVATTDLKNVYSWGSGEHMKLGHSSDKDESVPKVVDFFI 1391

Query: 351  GIQIEGVAAGLWHTICIS---------------------SDGDVYAFGGNQFGQLGTGGD 389
               +  V  G  HT+ I+                     S   +YA+G  + G+LG GGD
Sbjct: 1392 QKNVSKVVCGQNHTMTITFPDDLNNSNQDDEDEENMNGKSSSPIYAWGSAEHGKLGLGGD 1451

Query: 390  QAETLPRLLDAP---SLENVHSKS---VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDV 443
                     D P   +++ V+S +   +SCG+  +A+I  +  ++ WG  ++GQ+G G  
Sbjct: 1452 LKSPF---FDKPIPTAIKGVNSLNLIDISCGSDFSAMITSNNAIYVWGCGRFGQIGNGKN 1508

Query: 444  IDRNIPSQVTI 454
             D  +P+++++
Sbjct: 1509 DDVWVPTRISL 1519



 Score =  105 bits (262), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 72/276 (26%), Positives = 128/276 (46%), Gaps = 38/276 (13%)

Query: 205  DENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI-RMVS 263
            D  L  FP +  L    +   V+ G  H   ++D G+++ WG    GQLG G  + + +S
Sbjct: 1107 DPELKRFP-MAPLKNEKKAIKVSCGWDHIAVITDDGELYTWGSNQSGQLGHGLEVNKTLS 1165

Query: 264  SPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLT 323
             P             +     RG    + P F V         CGG H+  +     + +
Sbjct: 1166 LP-------------KRVDFFRG----KSPIFMV--------ECGGEHTIAVDSNYFVYS 1200

Query: 324  FGWGLYGQCGQGSTD-DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFG 382
            +G   +GQ G G+   ++  P  +  L G +I+ +AAG  H I +   G++++FG   FG
Sbjct: 1201 WGSDKFGQLGHGTKAVNQSRPKVIEELTGQKIQAIAAGFAHNIVLKKSGELFSFGYGDFG 1260

Query: 383  QLGTGGDQAETLPRLLDAPSL-------ENVHSKSVSCGARHTAVIADDGKVFCWGWNKY 435
            QLGTG   ++ +P  ++  ++       +      ++CG  H+ + +++G+V+ WG  K 
Sbjct: 1261 QLGTGSFHSKNIPTRIEINAIMGGLQHHDGGKITQIACGFGHSVICSENGEVYSWGLGKQ 1320

Query: 436  GQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTL 470
            GQLG     + + P  + T+ G     ++CG +HT+
Sbjct: 1321 GQLGHKVFENISKPRLIETLRGVT--KISCGHFHTV 1354


>gi|213626735|gb|AAI69997.1| RPGR [Xenopus laevis]
          Length = 727

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 90/278 (32%), Positives = 134/278 (48%), Gaps = 49/278 (17%)

Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
           ++F  +   N   +I  ++AG   + AL+  G+++ WG   EGQLGL  +  + S+P  I
Sbjct: 130 TSFQEISFFNTQYKIKQLSAGSNTSAALTVDGKLFMWGDNSEGQLGL-EKEAIYSTPQKI 188

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL 328
                                         G  +  I+CG  HSA +T  G L TFG   
Sbjct: 189 DI----------------------------GKPISWISCGYYHSAFVTQDGELYTFGEPE 220

Query: 329 YGQCGQGSTDDELS----PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQL 384
            G+ G  S  D+L     P  VS L G +++ V+ G  HTI ++ + +VY FG  QFGQL
Sbjct: 221 NGKLGLPS--DKLKKHKKPQRVSGLSG-KVKIVSCGGEHTIAVT-EKEVYTFGLGQFGQL 276

Query: 385 GTGGDQAET-LPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDV 443
           G G    ET LP+ +D  + + +    V+CG  HTAVI D G ++ +G  ++G+LGLG  
Sbjct: 277 GHGTFIFETQLPKAVDVLTKKTI--LYVTCGENHTAVITDKGLLYTFGDGRHGKLGLG-- 332

Query: 444 IDRNIPSQVTIEGC------VPRNVACGWWHTLLLAVP 475
            + N  +Q     C        ++VACG  H L+ A P
Sbjct: 333 -EENFTNQFVPILCSNFLKFTVQSVACGGCHMLVFATP 369



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/171 (31%), Positives = 84/171 (49%), Gaps = 6/171 (3%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           I+CG  H+ ++T  G L  FG   +GQ G  +      P CV +L   ++   + G  HT
Sbjct: 42  ISCGDEHTVLVTGNGKLYVFGSNNWGQLGLEAGSAISKPTCVKALKSEKVVFASCGRNHT 101

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHS--KSVSCGARHTAVIA 422
           +  +  G +Y+ GGN  GQLG G     T  + +   S  N     K +S G+  +A + 
Sbjct: 102 LLYTEQGKLYSSGGNSEGQLGLGDTSGRTSFQEI---SFFNTQYKIKQLSAGSNTSAALT 158

Query: 423 DDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
            DGK+F WG N  GQLGL      + P ++ I G     ++CG++H+  + 
Sbjct: 159 VDGKLFMWGDNSEGQLGLEKEAIYSTPQKIDI-GKPISWISCGYYHSAFVT 208



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 73/281 (25%), Positives = 124/281 (44%), Gaps = 38/281 (13%)

Query: 224 ATVAAGGRHTLALSDIGQVWGWGYGGEGQLGL--GSRIRMVSSPHPIPCIES------SY 275
           A ++ G  HT+ ++  G+++ +G    GQLGL  GS I   S P  +  ++S      S 
Sbjct: 40  AHISCGDEHTVLVTGNGKLYVFGSNNWGQLGLEAGSAI---SKPTCVKALKSEKVVFASC 96

Query: 276 GKDRSAALS-RGSV-----NSEGP---------------GFRVPGNYVKGIACGGRHSAV 314
           G++ +   + +G +     NSEG                 F      +K ++ G   SA 
Sbjct: 97  GRNHTLLYTEQGKLYSSGGNSEGQLGLGDTSGRTSFQEISFFNTQYKIKQLSAGSNTSAA 156

Query: 315 ITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVY 374
           +T  G L  +G    GQ G        +P  +   +G  I  ++ G +H+  ++ DG++Y
Sbjct: 157 LTVDGKLFMWGDNSEGQLGLEKEAIYSTPQKID--IGKPISWISCGYYHSAFVTQDGELY 214

Query: 375 AFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNK 434
            FG  + G+LG   D+ +   +      L     K VSCG  HT  + +  +V+ +G  +
Sbjct: 215 TFGEPENGKLGLPSDKLKKHKKPQRVSGLSG-KVKIVSCGGEHTIAVTEK-EVYTFGLGQ 272

Query: 435 YGQLGLGDVI-DRNIPSQVTI-EGCVPRNVACGWWHTLLLA 473
           +GQLG G  I +  +P  V +        V CG  HT ++ 
Sbjct: 273 FGQLGHGTFIFETQLPKAVDVLTKKTILYVTCGENHTAVIT 313



 Score = 43.9 bits (102), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 17/104 (16%)

Query: 371 GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
           G ++ FG ++F         AE +P       L+N     +SCG  HT ++  +GK++ +
Sbjct: 14  GALFTFGKSKF---------AENIPSKF---WLKNDKPAHISCGDEHTVLVTGNGKLYVF 61

Query: 431 GWNKYGQLGL--GDVIDRNIPSQVT-IEGCVPRNVACGWWHTLL 471
           G N +GQLGL  G  I +  P+ V  ++       +CG  HTLL
Sbjct: 62  GSNNWGQLGLEAGSAISK--PTCVKALKSEKVVFASCGRNHTLL 103


>gi|148228601|ref|NP_001089142.1| retinitis pigmentosa GTPase regulator [Xenopus laevis]
 gi|77808101|gb|ABB03732.1| RPGR [Xenopus laevis]
          Length = 727

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 90/278 (32%), Positives = 134/278 (48%), Gaps = 49/278 (17%)

Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
           ++F  +   N   +I  ++AG   + AL+  G+++ WG   EGQLGL  +  + S+P  I
Sbjct: 130 TSFQEISFFNTQYKIKQLSAGSNTSAALTVDGKLFMWGDNSEGQLGL-EKEAIYSTPQKI 188

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL 328
                                         G  +  I+CG  HSA +T  G L TFG   
Sbjct: 189 DI----------------------------GKPISWISCGYYHSAFVTQDGELYTFGEPE 220

Query: 329 YGQCGQGSTDDELS----PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQL 384
            G+ G  S  D+L     P  VS L G +++ V+ G  HTI ++ + +VY FG  QFGQL
Sbjct: 221 NGKLGLPS--DKLKKHKKPQRVSGLSG-KVKIVSCGGEHTIAVT-EKEVYTFGLGQFGQL 276

Query: 385 GTGGDQAET-LPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDV 443
           G G    ET LP+ +D  + + +    V+CG  HTAVI D G ++ +G  ++G+LGLG  
Sbjct: 277 GHGTFIFETQLPKAVDVLTKKTI--LYVTCGENHTAVITDKGLLYTFGDGRHGKLGLG-- 332

Query: 444 IDRNIPSQVTIEGC------VPRNVACGWWHTLLLAVP 475
            + N  +Q     C        ++VACG  H L+ A P
Sbjct: 333 -EENFTNQFVPILCSNFLKFTVQSVACGGCHMLVFATP 369



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/171 (31%), Positives = 84/171 (49%), Gaps = 6/171 (3%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           I+CG  H+ ++T  G L  FG   +GQ G  +      P CV +L   ++   + G  HT
Sbjct: 42  ISCGDEHTVLVTGNGKLYVFGSNNWGQLGLEAGSAISKPTCVKALKSEKVVFASCGRNHT 101

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHS--KSVSCGARHTAVIA 422
           +  +  G +Y+ GGN  GQLG G     T  + +   S  N     K +S G+  +A + 
Sbjct: 102 LLYTEQGKLYSSGGNSEGQLGLGDTSGRTSFQEI---SFFNTQYKIKQLSAGSNTSAALT 158

Query: 423 DDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
            DGK+F WG N  GQLGL      + P ++ I G     ++CG++H+  + 
Sbjct: 159 VDGKLFMWGDNSEGQLGLEKEAIYSTPQKIDI-GKPISWISCGYYHSAFVT 208



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 74/283 (26%), Positives = 125/283 (44%), Gaps = 38/283 (13%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGL--GSRIRMVSSPHPIPCIES------ 273
           R A ++ G  HT+ ++  G+++ +G    GQLGL  GS I   S P  +  ++S      
Sbjct: 38  RPAHISCGDEHTVLVTGNGKLYVFGSNNWGQLGLEAGSAI---SKPTCVKALKSEKVVFA 94

Query: 274 SYGKDRSAALS-RGSV-----NSEGP---------------GFRVPGNYVKGIACGGRHS 312
           S G++ +   + +G +     NSEG                 F      +K ++ G   S
Sbjct: 95  SCGRNHTLLYTEQGKLYSSGGNSEGQLGLGDTSGRTSFQEISFFNTQYKIKQLSAGSNTS 154

Query: 313 AVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGD 372
           A +T  G L  +G    GQ G        +P  +   +G  I  ++ G +H+  ++ DG+
Sbjct: 155 AALTVDGKLFMWGDNSEGQLGLEKEAIYSTPQKID--IGKPISWISCGYYHSAFVTQDGE 212

Query: 373 VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGW 432
           +Y FG  + G+LG   D+ +   +      L     K VSCG  HT  + +  +V+ +G 
Sbjct: 213 LYTFGEPENGKLGLPSDKLKKHKKPQRVSGLSG-KVKIVSCGGEHTIAVTEK-EVYTFGL 270

Query: 433 NKYGQLGLGDVI-DRNIPSQVTI-EGCVPRNVACGWWHTLLLA 473
            ++GQLG G  I +  +P  V +        V CG  HT ++ 
Sbjct: 271 GQFGQLGHGTFIFETQLPKAVDVLTKKTILYVTCGENHTAVIT 313



 Score = 43.9 bits (102), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 17/104 (16%)

Query: 371 GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
           G ++ FG ++F         AE +P       L+N     +SCG  HT ++  +GK++ +
Sbjct: 14  GALFTFGKSKF---------AENIPSKF---WLKNDRPAHISCGDEHTVLVTGNGKLYVF 61

Query: 431 GWNKYGQLGL--GDVIDRNIPSQVT-IEGCVPRNVACGWWHTLL 471
           G N +GQLGL  G  I +  P+ V  ++       +CG  HTLL
Sbjct: 62  GSNNWGQLGLEAGSAISK--PTCVKALKSEKVVFASCGRNHTLL 103


>gi|356526924|ref|XP_003532065.1| PREDICTED: uncharacterized protein LOC100797527 [Glycine max]
          Length = 1099

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/171 (36%), Positives = 96/171 (56%), Gaps = 4/171 (2%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ IACGG H+A++T  G + ++G    G+ G G   D   P  + SL    IE VA G 
Sbjct: 307 VQNIACGGEHAAMVTKQGEVFSWGGESGGRLGHGVDSDVPHPKLIESLSNTNIELVACGE 366

Query: 362 WHTICISSDGDVYAFGG--NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
           +HT  ++  GD+Y +G     +G LG G   +  +P+ ++ P LE +H  S+SCG  HTA
Sbjct: 367 YHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNGP-LEGIHVSSISCGPWHTA 425

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
           V+   G++F +G   +G LG GD    ++P ++ +++G      ACG WHT
Sbjct: 426 VVTSSGQLFTFGDGTFGVLGHGDRKSVSLPREIESLKGLRTVQAACGVWHT 476



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/268 (29%), Positives = 127/268 (47%), Gaps = 47/268 (17%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  +A GG H   ++  G+V+ WG    G+LG G    +   PHP   IES         
Sbjct: 307 VQNIACGGEHAAMVTKQGEVFSWGGESGGRLGHGVDSDV---PHP-KLIES--------- 353

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTDDE 340
                         +    ++ +ACG  H+  +T +G L T+G G   YG  G G+    
Sbjct: 354 --------------LSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSH 399

Query: 341 LSPNCVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLD 399
             P  V+  L GI +  ++ G WHT  ++S G ++ FG   FG LG G  ++ +LPR ++
Sbjct: 400 WVPKRVNGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDRKSVSLPREIE 459

Query: 400 APSLENVHSKSVSCGARHTAVIAD------------DGKVFCWGWNKYGQLGLGDVIDRN 447
             SL+ + +   +CG  HTA + +             GK+F WG    G+LG GD   + 
Sbjct: 460 --SLKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKL 517

Query: 448 IPSQ-VTIEGCVPRNVACGWWHTLLLAV 474
           +P++ VT++      VACG  H++ +A+
Sbjct: 518 VPTRVVTLDEPNFCQVACG--HSMTVAL 543



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 128/319 (40%), Gaps = 91/319 (28%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYG--GEGQLGLGSRIRMVSSPHPIP 269
           P L+       I  VA G  HT A++  G ++ WG G    G LG G+++      H +P
Sbjct: 348 PKLIESLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQV-----SHWVP 402

Query: 270 CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
                             VN  GP   + G +V  I+CG  H+AV+T +G L TFG G +
Sbjct: 403 ----------------KRVN--GP---LEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTF 441

Query: 330 GQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI------------SSDGDVYAFG 377
           G  G G       P  + SL G++    A G+WHT  +             S G ++ +G
Sbjct: 442 GVLGHGDRKSVSLPREIESLKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 501

Query: 378 GNQFGQLGTGGDQAETLPR---LLDAPSLENV---HSKSV-------------------- 411
               G+LG G  +++ +P     LD P+   V   HS +V                    
Sbjct: 502 DGDKGRLGHGDKESKLVPTRVVTLDEPNFCQVACGHSMTVALSRLGHVYTMGSCVYGHLG 561

Query: 412 ------------------------SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
                                   +CGA H AV+    +VF WG    G LG GD  DRN
Sbjct: 562 NTQADGKLPTPVEGKLSKSFVEEIACGAYHVAVLTSRTEVFTWGKGANGCLGHGDTNDRN 621

Query: 448 IPSQV-TIEGCVPRNVACG 465
            P+ V  ++    +++ACG
Sbjct: 622 TPTLVEALKDKQVKSIACG 640



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 100/382 (26%), Positives = 157/382 (41%), Gaps = 81/382 (21%)

Query: 38  LPLTVGSAW-RDVCGGGCG--FAMAISDSRKLITWGSTDDLGQS--YVTSGKHGEIPEPF 92
           LP  + SA   DV    CG   A  ++   ++ +WG     G+S   +  G   ++P P 
Sbjct: 295 LPKALESAVVLDVQNIACGGEHAAMVTKQGEVFSWG-----GESGGRLGHGVDSDVPHPK 349

Query: 93  PLPT--EASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFER 150
            + +    +I   A G  H  AVT  G++YTWG          +G L  G  +   V +R
Sbjct: 350 LIESLSNTNIELVACGEYHTCAVTLSGDLYTWG-----DGTYNYGLLGHGNQVSHWVPKR 404

Query: 151 QSSFLT-EQVSP------RSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSS 203
            +  L    VS        + V  SSG   +  DG         R+ +SL ++       
Sbjct: 405 VNGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDRKSVSLPREI------ 458

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDI------------GQVWGWGYGGEG 251
             E+L           G+R    A G  HT A+ ++            G+++ WG G +G
Sbjct: 459 --ESLK----------GLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKG 506

Query: 252 QLGLGSR------IRMVSSPHPIPCIESSYGKDRSAALSR-GSV------------NSEG 292
           +LG G +       R+V+   P  C + + G   + ALSR G V            N++ 
Sbjct: 507 RLGHGDKESKLVPTRVVTLDEPNFC-QVACGHSMTVALSRLGHVYTMGSCVYGHLGNTQA 565

Query: 293 PGF-------RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNC 345
            G        ++  ++V+ IACG  H AV+T    + T+G G  G  G G T+D  +P  
Sbjct: 566 DGKLPTPVEGKLSKSFVEEIACGAYHVAVLTSRTEVFTWGKGANGCLGHGDTNDRNTPTL 625

Query: 346 VSSLLGIQIEGVAAGLWHTICI 367
           V +L   Q++ +A G   T  I
Sbjct: 626 VEALKDKQVKSIACGTNFTAAI 647


>gi|330837741|ref|YP_004412382.1| hypothetical protein [Sphaerochaeta coccoides DSM 17374]
 gi|329749644|gb|AEC03000.1| hypothetical protein Spico_1802 [Sphaerochaeta coccoides DSM 17374]
          Length = 733

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 84/286 (29%), Positives = 135/286 (47%), Gaps = 38/286 (13%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES------- 273
             +A V+AG  +T+ L   G +WG G+   GQLG+G     +S+P  +    +       
Sbjct: 418 TNVAAVSAGWDYTMILKKDGTLWGTGHNYYGQLGIGGTTD-ISTPEQVKASTADNDFMTN 476

Query: 274 ----SYGKDRSAALSR---------------GSVNSEGPGFRVP----GNYVKGIACGGR 310
               S G++ +  L +               G  N E     VP    GN V  +  G  
Sbjct: 477 VKAVSAGQEHTMILKKDGTLWATGDNQHGQLGIGNYEAKDTPVPVSSMGNQVAAVFAGEL 536

Query: 311 HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG----IQIEGVAAGLWHTIC 366
           H+ ++   G L   G+   GQ G G T D  +P  V  L G      +  V+AG  HT+ 
Sbjct: 537 HTMILKKNGTLWATGYNASGQLGIGGTTDISTPEQVKGLGGAGVMTDVAAVSAGWKHTMI 596

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           + +DG ++A G NQ GQLG G  +A+  P  +   S+ N    +V  G  +T ++  DG 
Sbjct: 597 LKTDGTLWATGDNQHGQLGIGNYEAKDTP--VPVSSMGN-QVAAVFAGEEYTMILKKDGT 653

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           ++  G N++G+LG+GD  D++ P  V+  G   ++V+ G+ HT++L
Sbjct: 654 LWATGSNQFGRLGVGDYADKDTPVPVSSMGSDVKDVSAGYGHTMIL 699



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 85/271 (31%), Positives = 129/271 (47%), Gaps = 34/271 (12%)

Query: 219 PGVR--IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYG 276
           P V+  + +V+AGG HT+ L   G +WG GY   G+LG+G+   M +   P+   +S+ G
Sbjct: 354 PAVKLGVRSVSAGGYHTMILKTDGTLWGVGYNDNGELGIGTSGDMGNERTPVQVWDSTNG 413

Query: 277 KDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGS 336
                  SR   N            V  ++ G  ++ ++   G L   G   YGQ G G 
Sbjct: 414 -------SRFMTN------------VAAVSAGWDYTMILKKDGTLWGTGHNYYGQLGIGG 454

Query: 337 TDDELSPNCVSSLLG-----IQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
           T D  +P  V +          ++ V+AG  HT+ +  DG ++A G NQ GQLG G  +A
Sbjct: 455 TTDISTPEQVKASTADNDFMTNVKAVSAGQEHTMILKKDGTLWATGDNQHGQLGIGNYEA 514

Query: 392 ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
           +  P  +   S+ N    +V  G  HT ++  +G ++  G+N  GQLG+G   D + P Q
Sbjct: 515 KDTP--VPVSSMGN-QVAAVFAGELHTMILKKNGTLWATGYNASGQLGIGGTTDISTPEQ 571

Query: 452 VTIEG--CVPRNVA---CGWWHTLLLAVPPT 477
           V   G   V  +VA    GW HT++L    T
Sbjct: 572 VKGLGGAGVMTDVAAVSAGWKHTMILKTDGT 602



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/234 (31%), Positives = 111/234 (47%), Gaps = 28/234 (11%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G ++A V AG  HT+ L   G +W  GY   GQLG+G     +S+P  +  +        
Sbjct: 525 GNQVAAVFAGELHTMILKKNGTLWATGYNASGQLGIGGTTD-ISTPEQVKGL-------- 575

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDD 339
                       G G       V  ++ G +H+ ++   G L   G   +GQ G G+ + 
Sbjct: 576 -----------GGAGVMTD---VAAVSAGWKHTMILKTDGTLWATGDNQHGQLGIGNYEA 621

Query: 340 ELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLD 399
           + +P  VSS +G Q+  V AG  +T+ +  DG ++A G NQFG+LG G    +  P  + 
Sbjct: 622 KDTPVPVSS-MGNQVAAVFAGEEYTMILKKDGTLWATGSNQFGRLGVGDYADKDTPVPVS 680

Query: 400 APSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDV-IDRNIPSQV 452
           +   +    K VS G  HT ++  DG ++  G N+YGQLG G   I+ N P  V
Sbjct: 681 SMGSD---VKDVSAGYGHTMILKKDGTLWATGDNEYGQLGDGSTNINSNTPVPV 731


>gi|198471444|ref|XP_001355626.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
 gi|198145920|gb|EAL32685.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
          Length = 5072

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 134/306 (43%), Gaps = 80/306 (26%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GG+H LAL+  G+V+ WG G +G+LG G+R+              SY + + 
Sbjct: 4323 VKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRM--------------SYDRPKL 4368

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                            + G  V  IACG  HSA IT +G +LT+G G YG+ G G ++D+
Sbjct: 4369 VE-------------HLNGMNVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQ 4415

Query: 341  LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V +LLG +   +A  +G   T+CI+ D +V+++G   +G+LG GG     LP  +
Sbjct: 4416 LRPQLVEALLGYRAIDIACGSGDAQTLCINDDDNVWSWGDGDYGKLGRGGSDGCKLPYKI 4475

Query: 399  DA--------------------------------------------------PSLENVHS 408
            ++                                                   +L+    
Sbjct: 4476 ESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKI 4535

Query: 409  KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWW 467
             S++ G+ H    +D G+V+ WG N  GQLG G V     P  V  ++G     V CG  
Sbjct: 4536 ISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSA 4595

Query: 468  HTLLLA 473
            HTL L+
Sbjct: 4596 HTLALS 4601



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 122/255 (47%), Gaps = 36/255 (14%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GG+H LAL+  G+V+ WG G +G+LG G+R  +   P  +  + S   +D  
Sbjct: 3182 VKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTL-DKPRLVETLRSKKIRD-- 3238

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                    +ACG  HSA I+  G L T+G G YG+ G G    +
Sbjct: 3239 ------------------------VACGSSHSAAISSQGELYTWGLGEYGRLGHGDNSTQ 3274

Query: 341  LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V++L G ++  VA G     T+ ++ DG V+++G   FG+LG GG +    P  +
Sbjct: 3275 LKPKLVAALAGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEI 3334

Query: 399  DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCV 458
            +   L  +    + CGA+ +  +   G+V+ WG   Y +LG G   D+++     I G  
Sbjct: 3335 E--RLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGG--DQHVRKPQPIAGLR 3390

Query: 459  PR---NVACGWWHTL 470
             R   +VA G  H L
Sbjct: 3391 GRRVIHVAVGALHCL 3405



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 95/324 (29%), Positives = 136/324 (41%), Gaps = 50/324 (15%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V   +G  HC+A+T  GEVY WG  E        G L  G  +  D        L E ++
Sbjct: 4326 VAVNSGGKHCLALTTEGEVYAWGEGE-------DGKLGHGNRMSYD-----RPKLVEHLN 4373

Query: 161  PRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPG 220
              + V+  + G++       SG        ++  K        GD      P LV    G
Sbjct: 4374 GMN-VADIACGSAHSAAITASGHV------LTWGKGRYGRLGHGDSEDQLRPQLVEALLG 4426

Query: 221  VRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
             R   +A  +G   TL ++D   VW WG G  G+LG G      S    +P     Y  +
Sbjct: 4427 YRAIDIACGSGDAQTLCINDDDNVWSWGDGDYGKLGRGG-----SDGCKLP-----YKIE 4476

Query: 279  RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
              A L                  V  + CG + S  +T +GA+ T+G G + + G GS D
Sbjct: 4477 SLAGLG-----------------VIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVD 4519

Query: 339  DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
                P  V++L G +I  +A G  H +  S  G+VY +G N  GQLG G   A   PRL+
Sbjct: 4520 HVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLV 4579

Query: 399  DAPSLENVHSKSVSCGARHTAVIA 422
             A  L+  H   V+CG+ HT  ++
Sbjct: 4580 AA--LQGKHIVKVTCGSAHTLALS 4601



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 72/255 (28%), Positives = 117/255 (45%), Gaps = 30/255 (11%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            +R   +A G +    +   G+V+  G G  G+LGLG     V  PH +P +     K   
Sbjct: 3128 LRPIHIAGGSKSLFIVGQNGKVYACGEGTNGRLGLGV-THNVPLPHQLPVLHQYVVK--- 3183

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                + +V+S                 GG+H+  +T  G + ++G G  G+ G G+    
Sbjct: 3184 ----KVAVHS-----------------GGKHALALTLDGKVFSWGEGEDGKLGHGNRTTL 3222

Query: 341  LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
              P  V +L   +I  VA G  H+  ISS G++Y +G  ++G+LG G +  +  P+L+ A
Sbjct: 3223 DKPRLVETLRSKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNSTQLKPKLVAA 3282

Query: 401  PSLENVHSKSVSCGAR--HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGC 457
              L       V+CG+R   T  + +DG VF WG   +G+LG G     + P ++  + G 
Sbjct: 3283 --LAGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGI 3340

Query: 458  VPRNVACGWWHTLLL 472
                + CG   +L L
Sbjct: 3341 GVIQIECGAQFSLAL 3355



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 108/386 (27%), Positives = 154/386 (39%), Gaps = 73/386 (18%)

Query: 56   FAMAISDSRKLITWGSTDDL------GQSYV----TSGKHG-----EIPEPFPLPT-EAS 99
            F+  IS  R +   G +  L      G+ Y     T+G+ G      +P P  LP     
Sbjct: 3121 FSQTISRLRPIHIAGGSKSLFIVGQNGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQY 3180

Query: 100  IVKAAA---GWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLT 156
            +VK  A   G  H +A+T  G+V++WG  E        G L  G     D      +  +
Sbjct: 3181 VVKKVAVHSGGKHALALTLDGKVFSWGEGE-------DGKLGHGNRTTLDKPRLVETLRS 3233

Query: 157  EQVSPRSQVSRSSGGTSSGTDGR--GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCL 214
            +++   +  S  S   SS  +    G GE G                  GD +    P L
Sbjct: 3234 KKIRDVACGSSHSAAISSQGELYTWGLGEYGRL--------------GHGDNSTQLKPKL 3279

Query: 215  VTLNPGVRIATVAAGGR--HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIE 272
            V    G R+  VA G R   TLAL++ G V+ WG G  G+LG G                
Sbjct: 3280 VAALAGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG--------------- 3324

Query: 273  SSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQC 332
             S G D    + R S           G  V  I CG + S  +T AG + T+G G Y + 
Sbjct: 3325 -SEGSDTPHEIERLS-----------GIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRL 3372

Query: 333  GQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAE 392
            G G       P  ++ L G ++  VA G  H + ++  G VYA+G N  GQ G+G     
Sbjct: 3373 GHGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVN 3432

Query: 393  TLPRLLDAPSLENVHSKSVSCGARHT 418
              P L+    L+ V    V+CG+ H+
Sbjct: 3433 KKPALVIG--LDAVFVNRVACGSSHS 3456



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 100/205 (48%), Gaps = 36/205 (17%)

Query: 230 GRHTLALSDIGQVWGWGYGGEGQLGLG-SRIRMVSSPHPIPCIESSYGKDRSAALSRGSV 288
           GRH +A+      + WG G + +LG G +  R V  P  I  +      DR         
Sbjct: 629 GRHFMAIDINRNAYSWGNGEDHRLGHGDTHARAV--PTKITLL------DRC-------- 672

Query: 289 NSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS 348
                        VK + CG  +SA IT +G L T+G G Y + G G++DD+  P  V +
Sbjct: 673 -------------VKAVFCGCSYSAAITCSGNLYTWGRGTYARLGHGNSDDQPLPTVVMA 719

Query: 349 LLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENV 406
           L   +I  VA  +G  H++C++S+G VYA+G   +G+LG G       P L++  SL  V
Sbjct: 720 LTEHEIIDVALGSGDAHSLCLTSEGHVYAWGDADYGKLGNGNLNGSMSPVLVE--SLPKV 777

Query: 407 HSKSVSCGARHTAVIADDGKVFCWG 431
             + V  GA+ +  +  DG+++ WG
Sbjct: 778 --QRVFAGAQFSMALTTDGQLYSWG 800



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 107/230 (46%), Gaps = 38/230 (16%)

Query: 242  VWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPG 299
            ++GWG+   GQLG   GSRI+      P PC   S  +    A                 
Sbjct: 4238 IYGWGHNHRGQLGGLEGSRIKT-----PTPCEALSLLRPVQLA----------------- 4275

Query: 300  NYVKGIACGGRHSAV-ITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
                    GG  S   +T  G L   G+G  G+ G G  D    P  + SL  + ++ VA
Sbjct: 4276 --------GGEQSLFAVTPDGKLFATGYGSGGRLGVGGADSWAIPTLLGSLQHVFVKKVA 4327

Query: 359  --AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR 416
              +G  H + ++++G+VYA+G  + G+LG G   +   P+L++   L  ++   ++CG+ 
Sbjct: 4328 VNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVE--HLNGMNVADIACGSA 4385

Query: 417  HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
            H+A I   G V  WG  +YG+LG GD  D+  P  V  + G    ++ACG
Sbjct: 4386 HSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPQLVEALLGYRAIDIACG 4435



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 89/345 (25%), Positives = 135/345 (39%), Gaps = 60/345 (17%)

Query: 24   LPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDD--LGQSYVT 81
            LP + P+L   VV+         +     G   A+A++   K+ +WG  +D  LG    T
Sbjct: 3170 LPHQLPVLHQYVVK---------KVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRT 3220

Query: 82   SGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGT 141
            +     + E         I   A G +H  A++  GE+YTWG  E    GR  G     T
Sbjct: 3221 TLDKPRLVETL---RSKKIRDVACGSSHSAAISSQGELYTWGLGE---YGR-LGHGDNST 3273

Query: 142  GLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGR-GSGEEGSKRRRISLAKQTAES 200
             L   +    +     QV+  S+ +++   T  G     G G+ G       L +  +E 
Sbjct: 3274 QLKPKLVAALAGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFG------KLGRGGSEG 3327

Query: 201  SSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR 260
            S +  E        +    G+ +  +  G + +LAL+  G+VW WG G   +LG G   +
Sbjct: 3328 SDTPHE--------IERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGD-Q 3378

Query: 261  MVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA 320
             V  P PI                         G R  G  V  +A G  H   +TDAG 
Sbjct: 3379 HVRKPQPI------------------------AGLR--GRRVIHVAVGALHCLAVTDAGQ 3412

Query: 321  LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTI 365
            +  +G   +GQ G G+T     P  V  L  + +  VA G  H+I
Sbjct: 3413 VYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSI 3457



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 68/273 (24%), Positives = 115/273 (42%), Gaps = 35/273 (12%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
           GD +  A P  +TL     +  V  G  ++ A++  G ++ WG G   +LG G+     S
Sbjct: 655 GDTHARAVPTKITLLDRC-VKAVFCGCSYSAAITCSGNLYTWGRGTYARLGHGN-----S 708

Query: 264 SPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLT 323
              P+P +  +  +     ++ GS                    G  HS  +T  G +  
Sbjct: 709 DDQPLPTVVMALTEHEIIDVALGS--------------------GDAHSLCLTSEGHVYA 748

Query: 324 FGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF-- 381
           +G   YG+ G G+ +  +SP  V SL  +Q   V AG   ++ +++DG +Y++G      
Sbjct: 749 WGDADYGKLGNGNLNGSMSPVLVESLPKVQ--RVFAGAQFSMALTTDGQLYSWGKASCLG 806

Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
            QL     Q  ++PRL+    L++     V+ G  H   ++  G+VF WG N   Q+   
Sbjct: 807 HQLVERSAQWCSVPRLISG--LQHKRIVDVAVGVAHCLALSSCGEVFGWGRNDSQQICPS 864

Query: 442 DVIDR---NIPSQVTIEGCVPRNVACGWWHTLL 471
            V       +P  V +       VAC    +L+
Sbjct: 865 SVSSEPLLRVPILVALPTLPASGVACTASQSLI 897



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 1/137 (0%)

Query: 307 CGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC 366
           C GRH   I       ++G G   + G G T     P  ++ LL   ++ V  G  ++  
Sbjct: 627 CEGRHFMAIDINRNAYSWGNGEDHRLGHGDTHARAVPTKIT-LLDRCVKAVFCGCSYSAA 685

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           I+  G++Y +G   + +LG G    + LP ++ A +   +   ++  G  H+  +  +G 
Sbjct: 686 ITCSGNLYTWGRGTYARLGHGNSDDQPLPTVVMALTEHEIIDVALGSGDAHSLCLTSEGH 745

Query: 427 VFCWGWNKYGQLGLGDV 443
           V+ WG   YG+LG G++
Sbjct: 746 VYAWGDADYGKLGNGNL 762



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 83/207 (40%), Gaps = 30/207 (14%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLP----TEASIVKAA--AG 106
           GC ++ AI+ S  L TWG       +Y   G      +P P      TE  I+  A  +G
Sbjct: 679 GCSYSAAITCSGNLYTWGRG-----TYARLGHGNSDDQPLPTVVMALTEHEIIDVALGSG 733

Query: 107 WAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVS 166
            AH + +T  G VY WG  +       +G L  G     ++    S  L E +    +V 
Sbjct: 734 DAHSLCLTSEGHVYAWGDAD-------YGKLGNG-----NLNGSMSPVLVESLP---KVQ 778

Query: 167 RSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATV 226
           R   G          G+  S  +   L  Q  E S+       + P L++     RI  V
Sbjct: 779 RVFAGAQFSMALTTDGQLYSWGKASCLGHQLVERSA----QWCSVPRLISGLQHKRIVDV 834

Query: 227 AAGGRHTLALSDIGQVWGWGYGGEGQL 253
           A G  H LALS  G+V+GWG     Q+
Sbjct: 835 AVGVAHCLALSSCGEVFGWGRNDSQQI 861



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/151 (23%), Positives = 71/151 (47%), Gaps = 11/151 (7%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ I C      ++++ G L  + W ++    +    +E++   + S+     EG     
Sbjct: 578 VQQIVCSESIVLILSEDGKL--YNWRMFKPETEPQLLEEIAHETIVSI-ASHCEG----- 629

Query: 362 WHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
            H + I  + + Y++G  +  +LG G   A  +P  +   +L +   K+V CG  ++A I
Sbjct: 630 RHFMAIDINRNAYSWGNGEDHRLGHGDTHARAVPTKI---TLLDRCVKAVFCGCSYSAAI 686

Query: 422 ADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
              G ++ WG   Y +LG G+  D+ +P+ V
Sbjct: 687 TCSGNLYTWGRGTYARLGHGNSDDQPLPTVV 717



 Score = 45.1 bits (105), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 10/114 (8%)

Query: 352 IQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSV 411
            Q++ +       + +S DG +Y +    F        + ET P+LL+  + E + S + 
Sbjct: 576 FQVQQIVCSESIVLILSEDGKLYNW--RMF--------KPETEPQLLEEIAHETIVSIAS 625

Query: 412 SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACG 465
            C  RH   I  +   + WG  +  +LG GD   R +P+++T+     + V CG
Sbjct: 626 HCEGRHFMAIDINRNAYSWGNGEDHRLGHGDTHARAVPTKITLLDRCVKAVFCG 679



 Score = 43.1 bits (100), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 36/73 (49%), Gaps = 5/73 (6%)

Query: 53   GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
            G  F++A++ S  + TWG  D   LG   V    H   P+         I+  A G  HC
Sbjct: 4489 GSQFSVALTKSGAVYTWGKGDFHRLGHGSV---DHVRRPKKVAALQGKKIISIATGSLHC 4545

Query: 111  VAVTEGGEVYTWG 123
            VA ++ GEVYTWG
Sbjct: 4546 VACSDSGEVYTWG 4558


>gi|426231471|ref|XP_004009762.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Ovis aries]
          Length = 963

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 72/218 (33%), Positives = 109/218 (50%), Gaps = 30/218 (13%)

Query: 211 FPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI-- 268
           F C++       I  +  G  H+LALS  G+++ WG   +GQLG+G      S+P  +  
Sbjct: 145 FQCILQEK---NIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVEN 201

Query: 269 ----PCIESSYGKDRSAALSRG------------------SVNSEGPGF--RVPGNYVKG 304
               P ++ S G+  S ALS                    + N + P     +    V+ 
Sbjct: 202 LSGVPLVQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKDSPSCIEALDDQKVEF 261

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           +ACGG H+A++T +G + TFG G YGQ G  ST +EL P  V+ L+G ++  +A G  HT
Sbjct: 262 LACGGSHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPCLVAGLVGNRVTQIACGRQHT 321

Query: 365 ICISSD-GDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           +   SD G V++FG  + GQLG GG   + +PR +  P
Sbjct: 322 LAYVSDMGKVFSFGSGKEGQLGNGGTCNQLMPRPMKLP 359



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/238 (26%), Positives = 107/238 (44%), Gaps = 45/238 (18%)

Query: 47  RDVCGGGCG--FAMAISDSRKLITWGSTDD----LGQSYVTSGKHGEIPEPFPLPTEASI 100
           +++    CG   ++A+S   +L  WG   D    +G+ + ++      PE     +   +
Sbjct: 152 KNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTS----TPEIVENLSGVPL 207

Query: 101 VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
           V+ +AG AH +A++  G VY+WG  +C       G L  G   +KD     S    E + 
Sbjct: 208 VQISAGEAHSMALSMSGNVYSWGRNDC-------GQLGLGHTYNKD-----SPSCIEALD 255

Query: 161 PRSQVSRSSGGTSSGTDGR-------GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPC 213
            +     + GG+ +    +       G G+ G          Q   +S+  +      PC
Sbjct: 256 DQKVEFLACGGSHTALLTKSGLVFTFGDGKYG----------QLGHNSTQNELR----PC 301

Query: 214 LVTLNPGVRIATVAAGGRHTLA-LSDIGQVWGWGYGGEGQLGLGSRI-RMVSSPHPIP 269
           LV    G R+  +A G +HTLA +SD+G+V+ +G G EGQLG G    +++  P  +P
Sbjct: 302 LVAGLVGNRVTQIACGRQHTLAYVSDMGKVFSFGSGKEGQLGNGGTCNQLMPRPMKLP 359



 Score = 51.6 bits (122), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 84/215 (39%), Gaps = 54/215 (25%)

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
           + + C  R  AV+   GA      G+        +D    P C+     ++I  +  G  
Sbjct: 69  RQMCCTRRRLAVLERGGA------GVEVHQLPAGSDGARKPKCIKLGKKMKIHSMDQGEE 122

Query: 363 HTICISSD----------------------------------------GDVYAFGGNQFG 382
           H + +SSD                                        G+++A+G N  G
Sbjct: 123 HMLVLSSDGKPFEYKYSIEHARFQCILQEKNIIQITCGDYHSLALSKGGELFAWGQNLDG 182

Query: 383 QLGTGGDQAET-LPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
           QLG G   A T  P +++  +L  V    +S G  H+  ++  G V+ WG N  GQLGLG
Sbjct: 183 QLGVGRIFASTSTPEIVE--NLSGVPLVQISAGEAHSMALSMSGNVYSWGRNDCGQLGLG 240

Query: 442 DVIDRNIPSQVTIEGCVPRNV---ACGWWHTLLLA 473
              +++ PS   IE    + V   ACG  HT LL 
Sbjct: 241 HTYNKDSPS--CIEALDDQKVEFLACGGSHTALLT 273


>gi|118084855|ref|XP_417055.2| PREDICTED: RCC1 and BTB domain-containing protein 2 [Gallus gallus]
          Length = 566

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/253 (31%), Positives = 130/253 (51%), Gaps = 31/253 (12%)

Query: 220 GVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
           G +IA ++ G G H +  ++ G+V+ WG+    QLG G+     ++   +PC        
Sbjct: 113 GKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGT-----TNHGLVPC-------- 159

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
               +S   VN +          V  +ACG  HS V+T  G + T+G+   GQ G GST 
Sbjct: 160 ---QVSTNLVNKK----------VIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTA 206

Query: 339 DELSPNCVSSLLGIQIE-GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
           ++  P  V+S L  ++   +A G   ++ +  +G+VY +G N  GQLG G    +  P  
Sbjct: 207 NQPIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGSSGNQPTPCR 266

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE-G 456
           + A  L+ +  + V+CG  HT V+ D+G+++ WG N YGQLG G+  +++ P+ VT++  
Sbjct: 267 IAA--LQGIRVQRVACGCAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTTVTVDKD 324

Query: 457 CVPRNVACGWWHT 469
            V    AC   HT
Sbjct: 325 RVVEIAACHSAHT 337



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 68/203 (33%), Positives = 112/203 (55%), Gaps = 7/203 (3%)

Query: 276 GKDRSAALSRGSVNSEGPGFRVPGNYVKGIAC----GGRHSAVITDAGALLTFGWGLYGQ 331
           G + S  L  G + S     R+     K IAC     G H  + T+ G + T+G   Y Q
Sbjct: 87  GMNCSGCLGTGDIQSTIEPKRLDSLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQ 146

Query: 332 CGQGSTDDELSPNCVSS-LLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            G G+T+  L P  VS+ L+  ++  VA G  H++ ++SDG+VY +G N  GQ+G+G   
Sbjct: 147 LGNGTTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTA 206

Query: 391 AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
            + +PR + +  L+N    +++CG   +  + ++G+V+ WG+N  GQLGLG   ++  P 
Sbjct: 207 NQPIPRRVTS-CLQNKVVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGSSGNQPTPC 265

Query: 451 QVT-IEGCVPRNVACGWWHTLLL 472
           ++  ++G   + VACG  HTL+L
Sbjct: 266 RIAALQGIRVQRVACGCAHTLVL 288



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 113/231 (48%), Gaps = 30/231 (12%)

Query: 203 SGDENLSAFPCLVTLN-PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +G  N    PC V+ N    ++  VA G  H++ L+  G+V+ WGY   GQ+G GS    
Sbjct: 149 NGTTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGS---- 204

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
            ++  PIP         R  +  +  V             V  IACG   S  + + G +
Sbjct: 205 -TANQPIP--------RRVTSCLQNKV-------------VVNIACGQMCSMAVVENGEV 242

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             +G+   GQ G GS+ ++ +P  +++L GI+++ VA G  HT+ ++ +G +YA+G N +
Sbjct: 243 YVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAWGANSY 302

Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           GQLGTG    ++ P  +       V  +  +C + HT A     G+V+ WG
Sbjct: 303 GQLGTGNKSNQSYPTTVTVDKDRVV--EIAACHSAHTSAAKTQSGQVYMWG 351



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 3/108 (2%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           ++ + +V+  G N  G LGTG  Q+   P+ LD+   + +   S   G  H  +  ++G+
Sbjct: 77  VTENDEVFVLGMNCSGCLGTGDIQSTIEPKRLDSLCGKKIACLSYGSGP-HVVLATEEGE 135

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPR--NVACGWWHTLLL 472
           V+ WG N Y QLG G      +P QV+      +   VACG  H+++L
Sbjct: 136 VYTWGHNAYSQLGNGTTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVL 183


>gi|218201187|gb|EEC83614.1| hypothetical protein OsI_29322 [Oryza sativa Indica Group]
          Length = 395

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 133/294 (45%), Gaps = 50/294 (17%)

Query: 196 QTAESSSSGDENLSA-FPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG 254
           + AE    G   L    P      P +++  VAAGG H++ L+  G VW WG     Q  
Sbjct: 131 EEAERKEDGTRALRRDIPIPQRCAPKLKVRQVAAGGTHSVVLTQDGHVWTWG-----QPW 185

Query: 255 LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAV 314
               I+ +S+P  +  +E+                            VK IA G  H+  
Sbjct: 186 PPGDIKQISTPVRVQGLEN----------------------------VKVIAVGAFHNLA 217

Query: 315 ITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVY 374
           +T+ G L  +G   YGQ G G T     P  V  L  + +  +AAG WH+  ++ +G+VY
Sbjct: 218 LTEDGILWAWGNNEYGQLGTGDTQPRSQPIRVEGLSDLSLVDIAAGGWHSTALTKEGEVY 277

Query: 375 AFGGNQFGQLGTGGDQ-AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWN 433
           A+G  + G+LG G D+ +  +P+ ++  + E++    VSCG  H+  +  DG++F +G  
Sbjct: 278 AWGRGEHGRLGFGDDKSSHMVPQKVELLAGEDI--IQVSCGGTHSVALTRDGRMFSYGRG 335

Query: 434 KYGQLGLGDVIDRNIPSQVTIEGCVP-------------RNVACGWWHTLLLAV 474
            +G+LG G  +    P +V I+   P             R VACG  HTL +A 
Sbjct: 336 DHGRLGYGRKVTTGHPMEVPIDLPPPGTSGGDSGGQWQARYVACGGRHTLAIAT 389



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 102/384 (26%), Positives = 152/384 (39%), Gaps = 69/384 (17%)

Query: 57  AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEG 116
           ++AI    +L TWG        +    K    P P       SIV+AA G  HC+AV + 
Sbjct: 56  SLAICADGRLFTWGWNQRGTLGHPPETKTESSPAPVDALAGVSIVQAAIGGWHCLAVDDK 115

Query: 117 GEVYTWGWKECVPSGRVFGDLSTGT-GLDKDVFERQSSFLTEQVSPRSQVSR-SSGGTSS 174
           G  Y WG  E    G        GT  L +D+       + ++ +P+ +V + ++GGT S
Sbjct: 116 GRAYAWGGNEYGQCGEEAERKEDGTRALRRDI------PIPQRCAPKLKVRQVAAGGTHS 169

Query: 175 GTDGRGSGEEGSKRRRISLAKQT-----AESSSSGDENLSAFPCLVTLNPGVRIATVAAG 229
                           + L +        +    GD    + P  V     V++  +A G
Sbjct: 170 ----------------VVLTQDGHVWTWGQPWPPGDIKQISTPVRVQGLENVKV--IAVG 211

Query: 230 GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVN 289
             H LAL++ G +W WG    GQLG G      + P   P         R   LS  S+ 
Sbjct: 212 AFHNLALTEDGILWAWGNNEYGQLGTGD-----TQPRSQPI--------RVEGLSDLSLV 258

Query: 290 SEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDELSPNCVSS 348
                          IA GG HS  +T  G +  +G G +G+ G G      + P  V  
Sbjct: 259 D--------------IAAGGWHSTALTKEGEVYAWGRGEHGRLGFGDDKSSHMVPQKVEL 304

Query: 349 LLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL--LDAP----- 401
           L G  I  V+ G  H++ ++ DG ++++G    G+LG G       P    +D P     
Sbjct: 305 LAGEDIIQVSCGGTHSVALTRDGRMFSYGRGDHGRLGYGRKVTTGHPMEVPIDLPPPGTS 364

Query: 402 ---SLENVHSKSVSCGARHTAVIA 422
              S     ++ V+CG RHT  IA
Sbjct: 365 GGDSGGQWQARYVACGGRHTLAIA 388



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 91/225 (40%), Gaps = 54/225 (24%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDELSPNCVSSLLGIQIEGVAAG 360
           V  +  G R+S  I   G L T+GW   G  G    T  E SP  V +L G+ I   A G
Sbjct: 46  VSAVVAGSRNSLAICADGRLFTWGWNQRGTLGHPPETKTESSPAPVDALAGVSIVQAAIG 105

Query: 361 LWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLD---------APSLE------- 404
            WH + +   G  YA+GGN++GQ G   ++ E   R L          AP L+       
Sbjct: 106 GWHCLAVDDKGRAYAWGGNEYGQCGEEAERKEDGTRALRRDIPIPQRCAPKLKVRQVAAG 165

Query: 405 NVHS------------------------------------KSVSCGARHTAVIADDGKVF 428
             HS                                    K ++ GA H   + +DG ++
Sbjct: 166 GTHSVVLTQDGHVWTWGQPWPPGDIKQISTPVRVQGLENVKVIAVGAFHNLALTEDGILW 225

Query: 429 CWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
            WG N+YGQLG GD   R+ P +V  +      ++A G WH+  L
Sbjct: 226 AWGNNEYGQLGTGDTQPRSQPIRVEGLSDLSLVDIAAGGWHSTAL 270



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 81/166 (48%), Gaps = 18/166 (10%)

Query: 320 ALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN 379
           A+L +G G  GQ G G  ++E     V++L  + +  V AG  +++ I +DG ++ +G N
Sbjct: 12  AVLAWGSGEDGQLGMGGYEEEDWARGVAALDALAVSAVVAGSRNSLAICADGRLFTWGWN 71

Query: 380 QFGQLGTGGD-QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           Q G LG   + + E+ P  +DA  L  V     + G  H   + D G+ + WG N+YGQ 
Sbjct: 72  QRGTLGHPPETKTESSPAPVDA--LAGVSIVQAAIGGWHCLAVDDKGRAYAWGGNEYGQC 129

Query: 439 GL--------GDVIDRNIPSQVTIEGCVP----RNVACGWWHTLLL 472
           G            + R+IP     + C P    R VA G  H+++L
Sbjct: 130 GEEAERKEDGTRALRRDIP---IPQRCAPKLKVRQVAAGGTHSVVL 172



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 110/276 (39%), Gaps = 55/276 (19%)

Query: 47  RDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAG 106
           R V  GG   ++ ++    + TWG            G   +I  P  +    ++   A G
Sbjct: 160 RQVAAGGT-HSVVLTQDGHVWTWGQP-------WPPGDIKQISTPVRVQGLENVKVIAVG 211

Query: 107 WAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVS 166
             H +A+TE G ++ WG  E       +G L TG     D   R      E +S  S V 
Sbjct: 212 AFHNLALTEDGILWAWGNNE-------YGQLGTG-----DTQPRSQPIRVEGLSDLSLVD 259

Query: 167 RSSGG---TSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
            ++GG   T+   +G     G GE G    R+             D++    P  V L  
Sbjct: 260 IAAGGWHSTALTKEGEVYAWGRGEHG----RLGFGD---------DKSSHMVPQKVELLA 306

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G  I  V+ GG H++AL+  G+++ +G G  G+LG G   R V++ HP+           
Sbjct: 307 GEDIIQVSCGGTHSVALTRDGRMFSYGRGDHGRLGYG---RKVTTGHPMEVPIDLPPPGT 363

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVI 315
           S   S G   +            + +ACGGRH+  I
Sbjct: 364 SGGDSGGQWQA------------RYVACGGRHTLAI 387


>gi|326914164|ref|XP_003203397.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Meleagris
           gallopavo]
          Length = 567

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/253 (31%), Positives = 130/253 (51%), Gaps = 31/253 (12%)

Query: 220 GVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
           G +IA ++ G G H +  ++ G+V+ WG+    QLG G+     ++   +PC        
Sbjct: 114 GKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGT-----TNHGLVPC-------- 160

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
               +S   VN +          V  +ACG  HS V+T  G + T+G+   GQ G GST 
Sbjct: 161 ---QVSTNLVNKK----------VIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTA 207

Query: 339 DELSPNCVSSLLGIQIE-GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
           ++  P  V+S L  ++   +A G   ++ +  +G+VY +G N  GQLG G    +  P  
Sbjct: 208 NQPIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGSSGNQPTPCR 267

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE-G 456
           + A  L+ +  + V+CG  HT V+ D+G+++ WG N YGQLG G+  +++ P+ VT++  
Sbjct: 268 IAA--LQGIRVQRVACGCAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTTVTVDKD 325

Query: 457 CVPRNVACGWWHT 469
            V    AC   HT
Sbjct: 326 RVIEIAACHSAHT 338



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/203 (33%), Positives = 112/203 (55%), Gaps = 7/203 (3%)

Query: 276 GKDRSAALSRGSVNSEGPGFRVPGNYVKGIAC----GGRHSAVITDAGALLTFGWGLYGQ 331
           G + S  L  G V S     R+     K IAC     G H  + T+ G + T+G   Y Q
Sbjct: 88  GMNCSGCLGTGDVQSTIEPKRLDSLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQ 147

Query: 332 CGQGSTDDELSPNCVSS-LLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            G G+T+  L P  VS+ L+  ++  VA G  H++ ++SDG+VY +G N  GQ+G+G   
Sbjct: 148 LGNGTTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTA 207

Query: 391 AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
            + +PR + +  L+N    +++CG   +  + ++G+V+ WG+N  GQLGLG   ++  P 
Sbjct: 208 NQPIPRRVTS-CLQNKVVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGSSGNQPTPC 266

Query: 451 QVT-IEGCVPRNVACGWWHTLLL 472
           ++  ++G   + VACG  HTL+L
Sbjct: 267 RIAALQGIRVQRVACGCAHTLVL 289



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 113/231 (48%), Gaps = 30/231 (12%)

Query: 203 SGDENLSAFPCLVTLN-PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +G  N    PC V+ N    ++  VA G  H++ L+  G+V+ WGY   GQ+G GS    
Sbjct: 150 NGTTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGS---- 205

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
            ++  PIP         R  +  +  V             V  IACG   S  + + G +
Sbjct: 206 -TANQPIP--------RRVTSCLQNKV-------------VVNIACGQMCSMAVVENGEV 243

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             +G+   GQ G GS+ ++ +P  +++L GI+++ VA G  HT+ ++ +G +YA+G N +
Sbjct: 244 YVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAWGANSY 303

Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           GQLGTG    ++ P  +       +  +  +C + HT A     G+V+ WG
Sbjct: 304 GQLGTGNKSNQSYPTTVTVDKDRVI--EIAACHSAHTSAAKTQSGQVYMWG 352



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 3/108 (2%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           ++ + +V+  G N  G LGTG  Q+   P+ LD+   + +   S   G  H  +  ++G+
Sbjct: 78  VTENDEVFVLGMNCSGCLGTGDVQSTIEPKRLDSLCGKKIACLSYGSGP-HVVLATEEGE 136

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPR--NVACGWWHTLLL 472
           V+ WG N Y QLG G      +P QV+      +   VACG  H+++L
Sbjct: 137 VYTWGHNAYSQLGNGTTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVL 184


>gi|344284964|ref|XP_003414234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Loxodonta
           africana]
          Length = 1018

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 126/265 (47%), Gaps = 34/265 (12%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P L+     + +  ++ G  H+LA+   G+V+ WG G EGQLG+G    +  +P  +  +
Sbjct: 64  PGLIQALETLNVDLLSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKELNFTPMKVKAL 123

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
                                      G  +  ++CG  HS  ++  G + ++G   +GQ
Sbjct: 124 --------------------------AGIKIIQVSCGHYHSLALSQDGQVFSWGNNSHGQ 157

Query: 332 CGQGSTD-DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            G G     + SP  V SL GI +  VAAG  H+  +S  G  + +G N  GQL   G+ 
Sbjct: 158 LGLGKEFLSQESPQRVKSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQLALSGNN 217

Query: 391 AETL---PRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
                  PR + A  L+ +    +SCG+ HTAV+  DGKVF +G N  GQLG G   ++ 
Sbjct: 218 VPVQSYKPRSIGA--LKELGVVYISCGSEHTAVLTQDGKVFTFGDNSSGQLGHGPTAEKR 275

Query: 448 IPSQVT-IEGCVPRNVACGWWHTLL 471
            P  V  I+G V + + CG +HTL+
Sbjct: 276 GPQLVEGIDGLVSQ-IDCGSYHTLV 299



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 96/220 (43%), Gaps = 36/220 (16%)

Query: 206 ENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSP 265
           + L+  P  V    G++I  V+ G  H+LALS  GQV+ WG    GQLGLG       SP
Sbjct: 111 KELNFTPMKVKALAGIKIIQVSCGHYHSLALSQDGQVFSWGNNSHGQLGLGKEFLSQESP 170

Query: 266 HPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFG 325
             +  +E                          G  +  +A GG HS  ++ +G   +FG
Sbjct: 171 QRVKSLE--------------------------GIPLAQVAAGGAHSFALSLSGT--SFG 202

Query: 326 W-----GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
           W     G     G         P  + +L  + +  ++ G  HT  ++ DG V+ FG N 
Sbjct: 203 WGSNNAGQLALSGNNVPVQSYKPRSIGALKELGVVYISCGSEHTAVLTQDGKVFTFGDNS 262

Query: 381 FGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            GQLG G    +  P+L++   ++ + S+ + CG+ HT V
Sbjct: 263 SGQLGHGPTAEKRGPQLVEG--IDGLVSQ-IDCGSYHTLV 299


>gi|340729980|ref|XP_003403270.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
           terrestris]
          Length = 1104

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 118/413 (28%), Positives = 170/413 (41%), Gaps = 86/413 (20%)

Query: 47  RDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEI------PEPFPLPTEASI 100
           R  C        ++     +  WG+T           +HGE+       E   +P E   
Sbjct: 30  RLACEPVIEVQKSLLKKEDMFCWGNT-----------RHGELGLGGIEDEIILVPCEVDF 78

Query: 101 VKA------AAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGD--LSTGTGLDKDVFERQS 152
            KA      A G  + V +T  G++Y+ G  +    G   G   L    GLD  VF++ +
Sbjct: 79  KKASEIQQIACGENYTVVITHDGKIYSCGNNDYGQLGHEQGRKRLQLILGLDAFVFKKAA 138

Query: 153 --SFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSA 210
             ++ T  V+   Q+  S G  S G  G  S             K   E S         
Sbjct: 139 CGAYHTIAVNEWGQLF-SWGSNSEGQLGLNS-------------KNFMECS--------- 175

Query: 211 FPCLV-TLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP 269
            P +V TL   + I  +A G +H LAL++ G+++ WG   EGQLGLG  IR    P  I 
Sbjct: 176 -PRMVKTLGTSI-IVQIACGMKHALALTNNGELYSWGSNSEGQLGLGVDIRCEMKPKLIN 233

Query: 270 CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWG-- 327
            +                         VP   +  IACGG HS  I+ +GA+  FGWG  
Sbjct: 234 TLAG-----------------------VP---IAFIACGGYHSIAISKSGAI--FGWGKN 265

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG 387
            +GQ G   T +   P  + +L   ++   A G   ++ ++ DG V+  G   +GQLG G
Sbjct: 266 TFGQLGLNDTQNRNLPYQLQTLRNAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHG 325

Query: 388 GDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLG 439
            +  E LPR      L       +SCG RHT A++   G+V+ WG    GQLG
Sbjct: 326 SNNNEILPR--QVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGAGQLG 376



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 86/314 (27%), Positives = 129/314 (41%), Gaps = 71/314 (22%)

Query: 102 KAAAGWAHCVAVTEGGEVYTWG-------------WKECVPSGRVFGDLSTGTGLDKDVF 148
           KAA G  H +AV E G++++WG             + EC P  R+   L T   +     
Sbjct: 136 KAACGAYHTIAVNEWGQLFSWGSNSEGQLGLNSKNFMECSP--RMVKTLGTSIIVQIACG 193

Query: 149 ERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENL 208
            + +  LT      S  S S G    G D R   +                         
Sbjct: 194 MKHALALTNNGELYSWGSNSEGQLGLGVDIRCEMK------------------------- 228

Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
              P L+    GV IA +A GG H++A+S  G ++GWG    GQLGL    +  + P+ +
Sbjct: 229 ---PKLINTLAGVPIAFIACGGYHSIAISKSGAIFGWGKNTFGQLGLND-TQNRNLPYQL 284

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL 328
             +       R+A +                      ACG   S  +T  G + T G G+
Sbjct: 285 QTL-------RNAKVCYA-------------------ACGEEFSVFLTVDGGVFTCGAGM 318

Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFGGNQFGQLGTG 387
           YGQ G GS ++E+ P  V  L+G  +  ++ G  HT+  + S G VYA+G    GQLG  
Sbjct: 319 YGQLGHGSNNNEILPRQVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGAGQLGNN 378

Query: 388 GDQAETLPRLLDAP 401
             ++ T P+++  P
Sbjct: 379 STRSTTTPQVVRGP 392



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 100/226 (44%), Gaps = 55/226 (24%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ--------------------------- 334
           ++ IACG  ++ VIT  G + + G   YGQ G                            
Sbjct: 84  IQQIACGENYTVVITHDGKIYSCGNNDYGQLGHEQGRKRLQLILGLDAFVFKKAACGAYH 143

Query: 335 -------------GSTDD-----------ELSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
                        GS  +           E SP  V +L    I  +A G+ H + ++++
Sbjct: 144 TIAVNEWGQLFSWGSNSEGQLGLNSKNFMECSPRMVKTLGTSIIVQIACGMKHALALTNN 203

Query: 371 GDVYAFGGNQFGQLGTGGD-QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFC 429
           G++Y++G N  GQLG G D + E  P+L++  +L  V    ++CG  H+  I+  G +F 
Sbjct: 204 GELYSWGSNSEGQLGLGVDIRCEMKPKLIN--TLAGVPIAFIACGGYHSIAISKSGAIFG 261

Query: 430 WGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLAV 474
           WG N +GQLGL D  +RN+P Q+ T+        ACG   ++ L V
Sbjct: 262 WGKNTFGQLGLNDTQNRNLPYQLQTLRNAKVCYAACGEEFSVFLTV 307



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 90/194 (46%), Gaps = 26/194 (13%)

Query: 295 FRVPGNYVKG--IACGGRHSAVITDAGALL----TFGWG--LYGQCGQGSTDDE--LSPN 344
           FR   N+ K   +AC      VI    +LL     F WG   +G+ G G  +DE  L P 
Sbjct: 19  FRRNANWNKKRRLAC----EPVIEVQKSLLKKEDMFCWGNTRHGELGLGGIEDEIILVPC 74

Query: 345 CVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLE 404
            V      +I+ +A G  +T+ I+ DG +Y+ G N +GQLG      +   RL     L+
Sbjct: 75  EVDFKKASEIQQIACGENYTVVITHDGKIYSCGNNDYGQLG----HEQGRKRLQLILGLD 130

Query: 405 NVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNI----PSQV-TIEGCVP 459
               K  +CGA HT  + + G++F WG N  GQLGL     +N     P  V T+   + 
Sbjct: 131 AFVFKKAACGAYHTIAVNEWGQLFSWGSNSEGQLGLN---SKNFMECSPRMVKTLGTSII 187

Query: 460 RNVACGWWHTLLLA 473
             +ACG  H L L 
Sbjct: 188 VQIACGMKHALALT 201


>gi|323451188|gb|EGB07066.1| hypothetical protein AURANDRAFT_71888 [Aureococcus anophagefferens]
          Length = 1060

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 104/311 (33%), Positives = 144/311 (46%), Gaps = 59/311 (18%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHP-----IPCIESS 274
           GVR+  VAA G HTLAL D G+V+ WG G EGQLG G+     + PHP     +P    +
Sbjct: 117 GVRVVAVAARGAHTLALDDRGRVYSWGRGDEGQLGHGA---FEAVPHPRRIARLPTSVVA 173

Query: 275 YGKDRSAALS---RGSVNSEGPG---------------------FRVPGNYVKGIACGGR 310
            G  R+ +L+    G+V S G G                     F+        ++CG R
Sbjct: 174 VGAGRTHSLALDADGAVYSWGCGDDGALGHGDRRRQLAPRAVEFFKT--RPAAAVSCGSR 231

Query: 311 HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCV--SSLLGIQIEGVAAGLWHTICIS 368
           H+AV+T  GAL+T+GW  YGQCG  +  D L P  V      G +    A G  HT+C +
Sbjct: 232 HNAVVTADGALVTWGWAAYGQCGASAGGDGLRPAEVPLPGDGGAECVLAACGYRHTLCAT 291

Query: 369 --SDGD-VYAFGGNQFGQLGTGGDQAETLPRLLDAPSL------ENVHSKSVSCGARHTA 419
             + GD ++AFG N +GQ G G   +   PR +    L      +    +++S G RH+ 
Sbjct: 292 RHASGDAIWAFGWNAYGQCG-GSTCSAAAPRRVGGKFLGSQEGGDGAVVEALSAGGRHSV 350

Query: 420 VIAD----DGKVFCWGWNKYGQLGLGDVIDRN-------IPSQVTIEGCVP-RNVACGWW 467
                       + WG    GQLG GD  DR          ++V   G  P R +ACGW 
Sbjct: 351 CCVRLPGGGTATYAWGRGDDGQLGSGDRRDRRANPRVAATAARVNSVGQRPLRGLACGWA 410

Query: 468 HTLLLA-VPPT 477
           HT+ +   PP+
Sbjct: 411 HTVFVVDAPPS 421



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 120/283 (42%), Gaps = 82/283 (28%)

Query: 242 VWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNY 301
           V+  GY   GQLG G R   V     +P       + R++ L +G V+            
Sbjct: 34  VYACGYNATGQLGCGDRESRV-----VPW------RVRTSRLGKGRVD------------ 70

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
             G+ACG  +S V+  AG + + G  ++GQ G G  D+E +P  V  L G+++  VAA  
Sbjct: 71  --GVACGSSYSVVVV-AGQVASCGKNVHGQLGHGGRDEETAPRVVEGLRGVRVVAVAARG 127

Query: 362 WHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPR--------------------LLDAP 401
            HT+ +   G VY++G    GQLG G  +A   PR                     LDA 
Sbjct: 128 AHTLALDDRGRVYSWGRGDEGQLGHGAFEAVPHPRRIARLPTSVVAVGAGRTHSLALDAD 187

Query: 402 --------------------------SLENVHSK---SVSCGARHTAVIADDGKVFCWGW 432
                                     ++E   ++   +VSCG+RH AV+  DG +  WGW
Sbjct: 188 GAVYSWGCGDDGALGHGDRRRQLAPRAVEFFKTRPAAAVSCGSRHNAVVTADGALVTWGW 247

Query: 433 NKYGQLGLGDVIDRNIPSQVTIEG-----CVPRNVACGWWHTL 470
             YGQ G     D   P++V + G     CV    ACG+ HTL
Sbjct: 248 AAYGQCGASAGGDGLRPAEVPLPGDGGAECV--LAACGYRHTL 288


>gi|195432783|ref|XP_002064396.1| GK20144 [Drosophila willistoni]
 gi|194160481|gb|EDW75382.1| GK20144 [Drosophila willistoni]
          Length = 4996

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 134/306 (43%), Gaps = 80/306 (26%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GG+H LAL+  G+V+ WG G +G+LG G+R+              SY + + 
Sbjct: 4233 VKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRM--------------SYDRPKL 4278

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                            + G  V  IACG  HSA IT +G +LT+G G YG+ G G ++D+
Sbjct: 4279 VE-------------HLNGMSVADIACGSAHSAAITSSGHVLTWGKGRYGRLGHGDSEDQ 4325

Query: 341  LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V +LLG +   +A  +G   T+CI+ D +V+++G   +G+LG GG     LP  +
Sbjct: 4326 LRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKI 4385

Query: 399  DA--------------------------------------------------PSLENVHS 408
            ++                                                   +L+    
Sbjct: 4386 ESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKI 4445

Query: 409  KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWW 467
             S++ G+ H    +D G+V+ WG N  GQLG G V     P  V  ++G     V CG  
Sbjct: 4446 ISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSA 4505

Query: 468  HTLLLA 473
            HTL L+
Sbjct: 4506 HTLALS 4511



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 122/255 (47%), Gaps = 36/255 (14%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GG+H LAL+  G+V+ WG G +G+LG G+R              ++  K R 
Sbjct: 3114 VKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNR--------------TTLDKPRL 3159

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                R                ++ +ACG  HSA I+  G L T+G G YG+ G G    +
Sbjct: 3160 VEALR-------------AKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQ 3206

Query: 341  LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V++L G ++  VA G     T+ ++ DG V+++G   FG+LG GG +    P  +
Sbjct: 3207 LKPKQVTALAGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSATPHEI 3266

Query: 399  DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCV 458
            +   L  +    + CGA+ +  +   G+V+ WG   Y +LG G   D+++     I G  
Sbjct: 3267 E--RLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGG--DQHVRKPQPIGGLR 3322

Query: 459  PR---NVACGWWHTL 470
             R   +VA G  H L
Sbjct: 3323 GRRVIHVAVGALHCL 3337



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 95/327 (29%), Positives = 131/327 (40%), Gaps = 56/327 (17%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V   +G  HC+A+T  GEVY WG  E        G L  G  +  D              
Sbjct: 4236 VAVNSGGKHCLALTTEGEVYAWGEGE-------DGKLGHGNRMSYD-------------- 4274

Query: 161  PRSQVSRSSGGTSSGTDGRGSGEEG---SKRRRISLAKQTAESSSSGDENLSAFPCLVTL 217
             R ++     G S      GS       S    ++  K        GD      P LV  
Sbjct: 4275 -RPKLVEHLNGMSVADIACGSAHSAAITSSGHVLTWGKGRYGRLGHGDSEDQLRPKLVEA 4333

Query: 218  NPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSY 275
              G R   +A  +G   TL ++D   VW WG G  G+LG G      S    +P     Y
Sbjct: 4334 LLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGG-----SDGCKLP-----Y 4383

Query: 276  GKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG 335
              +  A L                  V  + CG + S  +T +GA+ T+G G + + G G
Sbjct: 4384 KIESLAGLG-----------------VIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHG 4426

Query: 336  STDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLP 395
            S D    P  V++L G +I  +A G  H +  S  G+VY +G N  GQLG G   A   P
Sbjct: 4427 SVDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQRP 4486

Query: 396  RLLDAPSLENVHSKSVSCGARHTAVIA 422
            RL+ A  L+  H   V+CG+ HT  ++
Sbjct: 4487 RLVAA--LQGKHIVKVTCGSAHTLALS 4511



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 105/223 (47%), Gaps = 29/223 (13%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            +R   ++ G +    +S  G+V+  G G  G+LGLG     V  PH +P +     K   
Sbjct: 3060 LRPIHISGGSKSLFIVSQDGKVFACGEGTNGRLGLGV-THNVPLPHQLPVLHQYVVK--- 3115

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                + +V+S                 GG+H+  +T  G + ++G G  G+ G G+    
Sbjct: 3116 ----KVAVHS-----------------GGKHALALTLDGKVFSWGEGEDGKLGHGNRTTL 3154

Query: 341  LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
              P  V +L   +I  VA G  H+  ISS G++Y +G  ++G+LG G +  +  P+ + A
Sbjct: 3155 DKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKQVTA 3214

Query: 401  PSLENVHSKSVSCGAR--HTAVIADDGKVFCWGWNKYGQLGLG 441
              L       V+CG+R   T  + +DG VF WG   +G+LG G
Sbjct: 3215 --LAGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRG 3255



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 117/239 (48%), Gaps = 48/239 (20%)

Query: 230 GRHTLALSDIGQVWGWGYGGEGQLGLG-SRIRMVSSPHPIPCIESSYGKDRSAALSRGSV 288
           GRH LA+      + WG G + +LG G +  R V +              + +AL R   
Sbjct: 624 GRHFLAIDSNRNAYSWGAGEDHRLGHGDTHARAVPT--------------KISALDR--- 666

Query: 289 NSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS 348
                        VK + CG  +SA IT +G L T+G G YG+ G G++DD+  P  V +
Sbjct: 667 ------------CVKAVFCGCSYSAAITWSGNLYTWGRGTYGRLGHGNSDDQCVPAIVMA 714

Query: 349 LLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA-PSLEN 405
           L   +I  VA  +G  H++C++S+G VYA+G   +G+LG G   +   P L++  P ++ 
Sbjct: 715 LAEYEIIDVALGSGDAHSLCLTSEGLVYAWGDGDYGKLGNGNCNSSLQPILVETLPRVQR 774

Query: 406 VHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC-VPRNVA 463
           + +     GA+ +  +  +G ++ WG  K   LG   V       + +++GC VPR V+
Sbjct: 775 IFA-----GAQSSMALTTEGHLYSWG--KASCLGHQQV-------ERSVQGCSVPRLVS 819



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 96/339 (28%), Positives = 135/339 (39%), Gaps = 58/339 (17%)

Query: 88   IPEPFPLPT-EASIVKAAA---GWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGL 143
            +P P  LP     +VK  A   G  H +A+T  G+V++WG  E        G L  G   
Sbjct: 3100 VPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGE-------DGKLGHGNRT 3152

Query: 144  DKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGR--GSGEEGSKRRRISLAKQTAESS 201
              D      +   +++   +  S  S   SS  +    G GE G                
Sbjct: 3153 TLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRL-------------- 3198

Query: 202  SSGDENLSAFPCLVTLNPGVRIATVAAGGR--HTLALSDIGQVWGWGYGGEGQLGLGSRI 259
              GD      P  VT   G R+  VA G R   TLAL++ G V+ WG G  G+LG G   
Sbjct: 3199 GHGDNATQLKPKQVTALAGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGS- 3257

Query: 260  RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAG 319
               ++PH I                           R+ G  V  I CG + S  +T AG
Sbjct: 3258 EGSATPHEIE--------------------------RLSGIGVIQIECGAQFSLALTRAG 3291

Query: 320  ALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN 379
             + T+G G Y + G G       P  +  L G ++  VA G  H + ++  G VYA+G N
Sbjct: 3292 EVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDN 3351

Query: 380  QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
              GQ G+G       P L+    L+ V    V+CG+ H+
Sbjct: 3352 DHGQQGSGNTFVNKKPALVIG--LDAVFVNRVACGSSHS 3388



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 107/230 (46%), Gaps = 38/230 (16%)

Query: 242  VWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPG 299
            ++GWG+   GQLG   GSRI+      P PC   S  +    A                 
Sbjct: 4148 IYGWGHNHRGQLGGLEGSRIKT-----PTPCEALSLLRPVQLA----------------- 4185

Query: 300  NYVKGIACGGRHSAV-ITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
                    GG  S   +T  G L   G+G  G+ G G +D    P  + SL  + ++ VA
Sbjct: 4186 --------GGEQSLFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVA 4237

Query: 359  --AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR 416
              +G  H + ++++G+VYA+G  + G+LG G   +   P+L++   L  +    ++CG+ 
Sbjct: 4238 VNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVE--HLNGMSVADIACGSA 4295

Query: 417  HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
            H+A I   G V  WG  +YG+LG GD  D+  P  V  + G    ++ACG
Sbjct: 4296 HSAAITSSGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACG 4345



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 134/348 (38%), Gaps = 66/348 (18%)

Query: 24   LPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDD--LGQSYVT 81
            LP + P+L   VV+         +     G   A+A++   K+ +WG  +D  LG    T
Sbjct: 3102 LPHQLPVLHQYVVK---------KVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRT 3152

Query: 82   SGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGT 141
            +     + E         I   A G +H  A++  GE+YTWG  E       +G L  G 
Sbjct: 3153 TLDKPRLVEAL---RAKKIRDVACGSSHSAAISSQGELYTWGLGE-------YGRLGHGD 3202

Query: 142  GLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQT 197
               +   ++ ++    +V   +  SR +   +   DG     G G+ G   R        
Sbjct: 3203 NATQLKPKQVTALAGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGR-------- 3254

Query: 198  AESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS 257
                  G    SA P  +    G+ +  +  G + +LAL+  G+VW WG G   +LG G 
Sbjct: 3255 ------GGSEGSATPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGG 3308

Query: 258  RIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITD 317
              + V  P PI                         G R  G  V  +A G  H   +TD
Sbjct: 3309 D-QHVRKPQPI------------------------GGLR--GRRVIHVAVGALHCLAVTD 3341

Query: 318  AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTI 365
            AG +  +G   +GQ G G+T     P  V  L  + +  VA G  H+I
Sbjct: 3342 AGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSI 3389



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 65/136 (47%), Gaps = 1/136 (0%)

Query: 307 CGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC 366
           C GRH   I       ++G G   + G G T     P  +S+L    ++ V  G  ++  
Sbjct: 622 CEGRHFLAIDSNRNAYSWGAGEDHRLGHGDTHARAVPTKISALDRC-VKAVFCGCSYSAA 680

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           I+  G++Y +G   +G+LG G    + +P ++ A +   +   ++  G  H+  +  +G 
Sbjct: 681 ITWSGNLYTWGRGTYGRLGHGNSDDQCVPAIVMALAEYEIIDVALGSGDAHSLCLTSEGL 740

Query: 427 VFCWGWNKYGQLGLGD 442
           V+ WG   YG+LG G+
Sbjct: 741 VYAWGDGDYGKLGNGN 756



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 58/223 (26%), Positives = 91/223 (40%), Gaps = 37/223 (16%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           G+ +    P +V       I  VA  +G  H+L L+  G V+ WG G  G+LG G+    
Sbjct: 701 GNSDDQCVPAIVMALAEYEIIDVALGSGDAHSLCLTSEGLVYAWGDGDYGKLGNGN---C 757

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
            SS  PI  +E+         L R                V+ I  G + S  +T  G L
Sbjct: 758 NSSLQPI-LVET---------LPR----------------VQRIFAGAQSSMALTTEGHL 791

Query: 322 LTFGWGLYGQCGQGSTDDELS----PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
             + WG     G    +  +     P  VSSL   ++  VA G+ H + ++S G+V+ +G
Sbjct: 792 --YSWGKASCLGHQQVERSVQGCSVPRLVSSLQHKRLVDVAVGVAHCLALTSCGEVFGWG 849

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            N   Q+       E L RL     L  + +  ++C A  + +
Sbjct: 850 RNDSQQICPSSVSCEPLLRLPILVGLPTLPASGIACTASQSLI 892



 Score = 47.0 bits (110), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 79/210 (37%), Gaps = 36/210 (17%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGE-------IPEPFPLPTEASIVKAA- 104
           GC ++ AI+ S  L TWG          T G+ G        +P       E  I+  A 
Sbjct: 674 GCSYSAAITWSGNLYTWGRG--------TYGRLGHGNSDDQCVPAIVMALAEYEIIDVAL 725

Query: 105 -AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRS 163
            +G AH + +T  G VY WG  +       +G L  G           SS     V    
Sbjct: 726 GSGDAHSLCLTSEGLVYAWGDGD-------YGKLGNGNC--------NSSLQPILVETLP 770

Query: 164 QVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRI 223
           +V R   G  S       G   S  +   L  Q  E S  G     + P LV+     R+
Sbjct: 771 RVQRIFAGAQSSMALTTEGHLYSWGKASCLGHQQVERSVQG----CSVPRLVSSLQHKRL 826

Query: 224 ATVAAGGRHTLALSDIGQVWGWGYGGEGQL 253
             VA G  H LAL+  G+V+GWG     Q+
Sbjct: 827 VDVAVGVAHCLALTSCGEVFGWGRNDSQQI 856



 Score = 45.8 bits (107), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 81/159 (50%), Gaps = 13/159 (8%)

Query: 319  GALLTFGWGL--YGQCG--QGSTDDELSP-NCVSSLLGIQIEGVAAGLWHTICISSDGDV 373
            GA   +GWG    GQ G  +GS     +P   +S L  +Q+ G    L+    ++ DG +
Sbjct: 4144 GASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLF---AVTPDGKL 4200

Query: 374  YAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSC--GARHTAVIADDGKVFCWG 431
            +A G    G+LG GG  +  +P LL   SL++V  K V+   G +H   +  +G+V+ WG
Sbjct: 4201 FATGYGSGGRLGVGGSDSWAIPTLLG--SLQHVFVKKVAVNSGGKHCLALTTEGEVYAWG 4258

Query: 432  WNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHT 469
              + G+LG G+ +  + P  V  + G    ++ACG  H+
Sbjct: 4259 EGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHS 4297


>gi|333978308|ref|YP_004516253.1| Ig domain-containing protein [Desulfotomaculum kuznetsovii DSM
           6115]
 gi|333821789|gb|AEG14452.1| Ig domain protein group 2 domain protein [Desulfotomaculum
           kuznetsovii DSM 6115]
          Length = 1401

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 117/251 (46%), Gaps = 38/251 (15%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  +AAGG H+LAL   G VW WGY G GQLG G+ I   ++P  +  +           
Sbjct: 119 VVAIAAGGGHSLALKSDGTVWAWGYNGYGQLGDGT-ITNRTTPVQVKNLTGVVAVAAGGG 177

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                                       HS  +   G +  +G+  YGQ G G+T +  +
Sbjct: 178 ----------------------------HSLALKSDGTVWAWGYNGYGQLGDGTTMNRYT 209

Query: 343 PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPS 402
           P  V +L G+    +AAG  H++ + SDG V+A+G N +GQLG G     T P  +    
Sbjct: 210 PVQVQNLTGV--VAIAAGSSHSLALKSDGTVWAWGNNGYGQLGDGTTTNRTTPVRVQG-- 265

Query: 403 LENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRN 461
           L +V   +++ G  H+  +  DG V+ WGWN  GQLG G   +R  P QV  + G V   
Sbjct: 266 LTDV--VAIAAGNEHSLALKSDGTVWTWGWNYSGQLGDGTTTNRYTPVQVQNLTGVVA-- 321

Query: 462 VACGWWHTLLL 472
           +A G  H+L L
Sbjct: 322 IAAGGGHSLAL 332



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 70/222 (31%), Positives = 103/222 (46%), Gaps = 35/222 (15%)

Query: 232 HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
           H+LAL   G VW WGY G GQLG G+ +   +   P+  +++  G               
Sbjct: 178 HSLALKSDGTVWAWGYNGYGQLGDGTTMNRYT---PV-QVQNLTG--------------- 218

Query: 292 GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                     V  IA G  HS  +   G +  +G   YGQ G G+T +  +P  V  L  
Sbjct: 219 ----------VVAIAAGSSHSLALKSDGTVWAWGNNGYGQLGDGTTTNRTTPVRVQGL-- 266

Query: 352 IQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSV 411
             +  +AAG  H++ + SDG V+ +G N  GQLG G       P  +   +L  V   ++
Sbjct: 267 TDVVAIAAGNEHSLALKSDGTVWTWGWNYSGQLGDGTTTNRYTP--VQVQNLTGV--VAI 322

Query: 412 SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT 453
           + G  H+  +  DG V+ WG N +G+LG G   DR+ P QV+
Sbjct: 323 AAGGGHSLALKSDGTVWAWGNNDWGELGDGTRTDRHTPVQVS 364



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 110/249 (44%), Gaps = 55/249 (22%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
           +AAGG  +LA+   G VW WG                 +P P+  +              
Sbjct: 37  IAAGGARSLAIKSDGTVWAWG----------------GTPVPVQNLTG------------ 68

Query: 286 GSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNC 345
                           V  +  G  +S  +   G +  +G   YGQ G G+T +  +P  
Sbjct: 69  ----------------VVAVEAGSFYSLALKSDGTVWAWGDNYYGQLGDGTTTNRYTPVQ 112

Query: 346 VSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLEN 405
           V +L G  +  +AAG  H++ + SDG V+A+G N +GQLG G     T P       ++N
Sbjct: 113 VQNLTG--VVAIAAGGGHSLALKSDGTVWAWGYNGYGQLGDGTITNRTTPV-----QVKN 165

Query: 406 V-HSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVA 463
           +    +V+ G  H+  +  DG V+ WG+N YGQLG G  ++R  P QV  + G V   +A
Sbjct: 166 LTGVVAVAAGGGHSLALKSDGTVWAWGYNGYGQLGDGTTMNRYTPVQVQNLTGVVA--IA 223

Query: 464 CGWWHTLLL 472
            G  H+L L
Sbjct: 224 AGSSHSLAL 232



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 52/154 (33%), Positives = 77/154 (50%), Gaps = 22/154 (14%)

Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
           G+ VK IA GG  S  I   G +  + WG              +P  V +L G+    V 
Sbjct: 32  GSQVK-IAAGGARSLAIKSDGTV--WAWGG-------------TPVPVQNLTGV--VAVE 73

Query: 359 AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
           AG ++++ + SDG V+A+G N +GQLG G       P  +   +L  V   +++ G  H+
Sbjct: 74  AGSFYSLALKSDGTVWAWGDNYYGQLGDGTTTNRYTP--VQVQNLTGV--VAIAAGGGHS 129

Query: 419 AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
             +  DG V+ WG+N YGQLG G + +R  P QV
Sbjct: 130 LALKSDGTVWAWGYNGYGQLGDGTITNRTTPVQV 163



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 110/291 (37%), Gaps = 57/291 (19%)

Query: 91  PFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFER 150
           P  +     +V  AAG  H +A+   G V+ WG+         +G L  GT +       
Sbjct: 110 PVQVQNLTGVVAIAAGGGHSLALKSDGTVWAWGYNG-------YGQLGDGT-ITNRTTPV 161

Query: 151 QSSFLTEQVSPRSQVSRSSGGTSSGT------DGRGSGEEGSKRRRISLAKQTAESSSSG 204
           Q   LT  V+  +    S    S GT      +G G   +G+   R +  +         
Sbjct: 162 QVKNLTGVVAVAAGGGHSLALKSDGTVWAWGYNGYGQLGDGTTMNRYTPVQV-------- 213

Query: 205 DENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS---RIRM 261
            +NL+             +  +AAG  H+LAL   G VW WG  G GQLG G+   R   
Sbjct: 214 -QNLTG------------VVAIAAGSSHSLALKSDGTVWAWGNNGYGQLGDGTTTNRTTP 260

Query: 262 VSSPHPIPCIESSYGKDRSAAL-SRGSV-----------------NSEGPGFRVPGNYVK 303
           V        +  + G + S AL S G+V                 N   P        V 
Sbjct: 261 VRVQGLTDVVAIAAGNEHSLALKSDGTVWTWGWNYSGQLGDGTTTNRYTPVQVQNLTGVV 320

Query: 304 GIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSL-LGIQ 353
            IA GG HS  +   G +  +G   +G+ G G+  D  +P  VS L LG Q
Sbjct: 321 AIAAGGGHSLALKSDGTVWAWGNNDWGELGDGTRTDRHTPVQVSGLNLGQQ 371


>gi|405965978|gb|EKC31310.1| Putative E3 ubiquitin-protein ligase HERC2 [Crassostrea gigas]
          Length = 5345

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/251 (31%), Positives = 124/251 (49%), Gaps = 32/251 (12%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            ++   V +GG+H LALS  G+V+ WG G +G+LG G+R          PC       DR 
Sbjct: 4548 IKKLAVNSGGKHCLALSAEGEVYSWGEGEDGKLGHGNR---------SPC-------DRP 4591

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
              +             + G  V  IA GG HSA IT  G L T+G G YG+ G G ++D+
Sbjct: 4592 RVID-----------SLRGKEVVDIAAGGAHSACITANGELYTWGKGRYGRLGHGDSEDQ 4640

Query: 341  LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
              P  V +L   ++  +A  +G   T+CI+ D +V+++G   +G+LG GG     +P  +
Sbjct: 4641 PRPKLVEALKSYRVVDMACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPMKI 4700

Query: 399  DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGC 457
            +  +L+      V CG++ +  +   G V+ WG   Y +LG G       P +V+ ++  
Sbjct: 4701 E--TLQGQGVMKVECGSQFSVALTKSGSVYTWGKGDYHRLGHGSDDHVRRPRKVSALQNK 4758

Query: 458  VPRNVACGWWH 468
               +VACG  H
Sbjct: 4759 KVIDVACGSLH 4769



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 91/314 (28%), Positives = 129/314 (41%), Gaps = 84/314 (26%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            ++   V +GGRH+LAL+  G+V+ WG G +G+LG  SR      P  I  ++S       
Sbjct: 3552 IKKVAVHSGGRHSLALTTDGKVFSWGEGDDGKLGHFSRWN-CDKPRLIEALKS------- 3603

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                 V+ IACG  HSA IT  G L T+G G YG+ G G    +
Sbjct: 3604 -------------------KRVRDIACGSSHSAAITSNGDLYTWGLGEYGRLGHGDNTTQ 3644

Query: 341  LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLP--- 395
            L P  V +L   ++  VA G     T+ ++ +G VY++G   FG+LG GG +   +P   
Sbjct: 3645 LKPKQVKALAHERVVQVACGSRDAQTLALTDEGKVYSWGDGDFGKLGRGGSEGCNVPHEV 3704

Query: 396  -RLLDAPSLE--------------------------------NVHSKS------------ 410
             RL D    +                                + H +             
Sbjct: 3705 DRLRDQKVCQIECGAQFSLALTKSGQVWTWGKGDYFRLGHGTDAHVRKPQIVEGLKGKKI 3764

Query: 411  --VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACG--- 465
              V+ GA H   + D G+VF WG N +GQ G G       P+ V +EG     VACG   
Sbjct: 3765 VHVAVGALHCLAVTDSGQVFAWGDNDHGQQGNGTTTVNRKPALVVLEGYKISKVACGSSH 3824

Query: 466  --WWHTLLLAVPPT 477
               W T  ++VP T
Sbjct: 3825 SIAWATTDMSVPTT 3838



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 74/270 (27%), Positives = 126/270 (46%), Gaps = 32/270 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
           GD      P L+T   G ++A +  G  +++AL+  G+V+ WG G  G+LG GS     S
Sbjct: 654 GDYQNHEEPALITGLSGKQVAKICCGSSYSVALTSNGEVYSWGKGNFGRLGHGS-----S 708

Query: 264 SPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGG--RHSAVITDAGAL 321
                P +   +                       G+ +  +ACG     +  +TD+GA+
Sbjct: 709 EDQTTPMLLKFF----------------------KGHRIVDVACGSGDAQTLAVTDSGAV 746

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
            ++G G YG+ G+G  D   +P  +  L+G  +  V  G   ++ ++  G VY +G    
Sbjct: 747 YSWGDGDYGKLGRGGNDGCKTPKVIEKLMGQDVVRVYCGNQFSMALTKSGAVYTWGKGDN 806

Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
            +LG G +     P+ ++A S + V  K ++ G+ H   I +DG+++ WG N+ GQLG  
Sbjct: 807 YRLGHGTEDHARHPKQIEALSSKKV--KDIAIGSLHCMAITEDGELYGWGRNEQGQLGNP 864

Query: 442 DVIDRNIPSQV-TIEGCVPRNVACGWWHTL 470
            + +   P+ +  +EG     VACG   T 
Sbjct: 865 SISNFTEPTLIGGMEGKNIIGVACGPTQTF 894



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 119/250 (47%), Gaps = 38/250 (15%)

Query: 205  DENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSS 264
            ++NLSA  C+           +  G +    ++  G+V+  G    G+LGLG     VS 
Sbjct: 3491 NDNLSALRCV----------QIVGGSKSLFCVTQEGKVYACGEATNGRLGLGITTGTVSV 3540

Query: 265  PHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTF 324
            P  I  + S Y       + + +V+S                 GGRHS  +T  G + ++
Sbjct: 3541 PRQITSL-SQY------VIKKVAVHS-----------------GGRHSLALTTDGKVFSW 3576

Query: 325  GWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQL 384
            G G  G+ G  S  +   P  + +L   ++  +A G  H+  I+S+GD+Y +G  ++G+L
Sbjct: 3577 GEGDDGKLGHFSRWNCDKPRLIEALKSKRVRDIACGSSHSAAITSNGDLYTWGLGEYGRL 3636

Query: 385  GTGGDQAETLPRLLDAPSLENVHSKSVSCGAR--HTAVIADDGKVFCWGWNKYGQLGLGD 442
            G G +  +  P+ + A + E V    V+CG+R   T  + D+GKV+ WG   +G+LG G 
Sbjct: 3637 GHGDNTTQLKPKQVKALAHERV--VQVACGSRDAQTLALTDEGKVYSWGDGDFGKLGRGG 3694

Query: 443  VIDRNIPSQV 452
                N+P +V
Sbjct: 3695 SEGCNVPHEV 3704



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 120/261 (45%), Gaps = 42/261 (16%)

Query: 240  GQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAALSRG-----SVNSEG 292
            GQ+WGWG+   GQLG   G++++      P+ C   +    R   L  G     +V +EG
Sbjct: 4461 GQIWGWGHNHRGQLGGVDGAKVK-----QPVSC--EALAVTRPIQLVGGEQTLFAVTAEG 4513

Query: 293  PGF-------------------------RVPGNYVKGIAC--GGRHSAVITDAGALLTFG 325
              F                          +   ++K +A   GG+H   ++  G + ++G
Sbjct: 4514 KVFATGYGAGGRLGVGGTESVSHPTQLESIQHVFIKKLAVNSGGKHCLALSAEGEVYSWG 4573

Query: 326  WGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLG 385
             G  G+ G G+      P  + SL G ++  +AAG  H+ CI+++G++Y +G  ++G+LG
Sbjct: 4574 EGEDGKLGHGNRSPCDRPRVIDSLRGKEVVDIAAGGAHSACITANGELYTWGKGRYGRLG 4633

Query: 386  TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVID 445
             G  + +  P+L++A     V   +   G   T  I DD  V+ WG   YG+LG G    
Sbjct: 4634 HGDSEDQPRPKLVEALKSYRVVDMACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDG 4693

Query: 446  RNIPSQV-TIEGCVPRNVACG 465
              +P ++ T++G     V CG
Sbjct: 4694 CKVPMKIETLQGQGVMKVECG 4714



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 73/275 (26%), Positives = 116/275 (42%), Gaps = 55/275 (20%)

Query: 220  GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
            G  +  +AAGG H+  ++  G+++ WG G  G+LG G      S   P P +  +    R
Sbjct: 4599 GKEVVDIAAGGAHSACITANGELYTWGKGRYGRLGHGD-----SEDQPRPKLVEALKSYR 4653

Query: 280  SAALSRGSVNSE-------------------------GPGFRVP-------GNYVKGIAC 307
               ++ GS +++                           G +VP       G  V  + C
Sbjct: 4654 VVDMACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIETLQGQGVMKVEC 4713

Query: 308  GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI 367
            G + S  +T +G++ T+G G Y + G GS D    P  VS+L   ++  VA G  H +  
Sbjct: 4714 GSQFSVALTKSGSVYTWGKGDYHRLGHGSDDHVRRPRKVSALQNKKVIDVACGSLHCVAC 4773

Query: 368  SSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKV 427
            +  G+V+++G N  GQLG G   A   PRL+   SL       V+CG+ H+         
Sbjct: 4774 TDTGEVFSWGDNDEGQLGDGTTNAIQRPRLV--ASLLGKKINRVACGSAHS--------- 4822

Query: 428  FCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNV 462
              W  NK    G        +PS + +E    +N+
Sbjct: 4823 LAWSTNKAVSAG-------KLPSDIPMEYNHLQNI 4850



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 65/217 (29%), Positives = 90/217 (41%), Gaps = 32/217 (14%)

Query: 204  GDENLSAFPCLVTLNPGVRIATVAAGGR--HTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
            GD      P  V      R+  VA G R   TLAL+D G+V+ WG G  G+LG G     
Sbjct: 3639 GDNTTQLKPKQVKALAHERVVQVACGSRDAQTLALTDEGKVYSWGDGDFGKLGRGGS-EG 3697

Query: 262  VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
             + PH +                           R+    V  I CG + S  +T +G +
Sbjct: 3698 CNVPHEVD--------------------------RLRDQKVCQIECGAQFSLALTKSGQV 3731

Query: 322  LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             T+G G Y + G G+      P  V  L G +I  VA G  H + ++  G V+A+G N  
Sbjct: 3732 WTWGKGDYFRLGHGTDAHVRKPQIVEGLKGKKIVHVAVGALHCLAVTDSGQVFAWGDNDH 3791

Query: 382  GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
            GQ G G       P L+    LE      V+CG+ H+
Sbjct: 3792 GQQGNGTTTVNRKPALV---VLEGYKISKVACGSSHS 3825



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 68/133 (51%)

Query: 309 GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICIS 368
           G+H   +T  G + ++G G  G+ G G   +   P  ++ L G Q+  +  G  +++ ++
Sbjct: 628 GKHYMGLTSDGEVFSWGNGDGGKLGHGDYQNHEEPALITGLSGKQVAKICCGSSYSVALT 687

Query: 369 SDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVF 428
           S+G+VY++G   FG+LG G  + +T P LL       +   +   G   T  + D G V+
Sbjct: 688 SNGEVYSWGKGNFGRLGHGSSEDQTTPMLLKFFKGHRIVDVACGSGDAQTLAVTDSGAVY 747

Query: 429 CWGWNKYGQLGLG 441
            WG   YG+LG G
Sbjct: 748 SWGDGDYGKLGRG 760



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 85/314 (27%), Positives = 133/314 (42%), Gaps = 54/314 (17%)

Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRS 168
           H + +T  GEV++WG  +        G L  G     D    +   L   +S + QV++ 
Sbjct: 630 HYMGLTSDGEVFSWGNGDG-------GKLGHG-----DYQNHEEPALITGLSGK-QVAKI 676

Query: 169 SGGTSSGTDGRGSGEEGS--KRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATV 226
             G+S       +GE  S  K     L   ++E  ++        P L+    G RI  V
Sbjct: 677 CCGSSYSVALTSNGEVYSWGKGNFGRLGHGSSEDQTT--------PMLLKFFKGHRIVDV 728

Query: 227 A--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
           A  +G   TLA++D G V+ WG G  G+LG G       +P     IE   G+D      
Sbjct: 729 ACGSGDAQTLAVTDSGAVYSWGDGDYGKLGRGGN-DGCKTPK---VIEKLMGQD------ 778

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN 344
                            V  + CG + S  +T +GA+ T+G G   + G G+ D    P 
Sbjct: 779 -----------------VVRVYCGNQFSMALTKSGAVYTWGKGDNYRLGHGTEDHARHPK 821

Query: 345 CVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLE 404
            + +L   +++ +A G  H + I+ DG++Y +G N+ GQLG       T P L+     +
Sbjct: 822 QIEALSSKKVKDIAIGSLHCMAITEDGELYGWGRNEQGQLGNPSISNFTEPTLIGGMEGK 881

Query: 405 NVHSKSVSCGARHT 418
           N+    V+CG   T
Sbjct: 882 NI--IGVACGPTQT 893



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 81/177 (45%), Gaps = 17/177 (9%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYG---QCGQGSTDDELSPNCVSSLLGIQIEGVA 358
           V+ IAC  R   +++ AG +    +       Q   G  D E+          I+I    
Sbjct: 577 VQQIACSERCCLILSKAGKVYMLYYTSLSPTLQQLNGFGDREV----------IRIASHP 626

Query: 359 AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
            G  H + ++SDG+V+++G    G+LG G  Q    P L+   S + V    + CG+ ++
Sbjct: 627 DGK-HYMGLTSDGEVFSWGNGDGGKLGHGDYQNHEEPALITGLSGKQV--AKICCGSSYS 683

Query: 419 AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLAV 474
             +  +G+V+ WG   +G+LG G   D+  P  +   +G    +VACG      LAV
Sbjct: 684 VALTSNGEVYSWGKGNFGRLGHGSSEDQTTPMLLKFFKGHRIVDVACGSGDAQTLAV 740



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 5/126 (3%)

Query: 346  VSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAE-TLPRLLDAPSLE 404
            +S+L  +QI G +  L+   C++ +G VYA G    G+LG G      ++PR + + S  
Sbjct: 3494 LSALRCVQIVGGSKSLF---CVTQEGKVYACGEATNGRLGLGITTGTVSVPRQITSLSQY 3550

Query: 405  NVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVA 463
             +   +V  G RH+  +  DGKVF WG    G+LG     + + P  +  ++    R++A
Sbjct: 3551 VIKKVAVHSGGRHSLALTTDGKVFSWGEGDDGKLGHFSRWNCDKPRLIEALKSKRVRDIA 3610

Query: 464  CGWWHT 469
            CG  H+
Sbjct: 3611 CGSSHS 3616



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 3/82 (3%)

Query: 47  RDVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +DV    CG  F+MA++ S  + TWG  D+    + T   H   P+     +   +   A
Sbjct: 777 QDVVRVYCGNQFSMALTKSGAVYTWGKGDNYRLGHGTED-HARHPKQIEALSSKKVKDIA 835

Query: 105 AGWAHCVAVTEGGEVYTWGWKE 126
            G  HC+A+TE GE+Y WG  E
Sbjct: 836 IGSLHCMAITEDGELYGWGRNE 857



 Score = 45.4 bits (106), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 71/286 (24%), Positives = 101/286 (35%), Gaps = 72/286 (25%)

Query: 100 IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQV 159
           + K   G ++ VA+T  GEVY+WG          FG L  G+  D+        F   ++
Sbjct: 673 VAKICCGSSYSVALTSNGEVYSWGKGN-------FGRLGHGSSEDQTTPMLLKFFKGHRI 725

Query: 160 --------SPRSQVSRSSGGTSS------GTDGRGSGEEGSKRRRISLAKQTAESSSSGD 205
                     ++     SG   S      G  GRG G +G K                  
Sbjct: 726 VDVACGSGDAQTLAVTDSGAVYSWGDGDYGKLGRG-GNDGCKT----------------- 767

Query: 206 ENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSP 265
                 P ++    G  +  V  G + ++AL+  G V+ WG G   +LG G+      + 
Sbjct: 768 ------PKVIEKLMGQDVVRVYCGNQFSMALTKSGAVYTWGKGDNYRLGHGTEDH---AR 818

Query: 266 HPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFG 325
           HP           +  ALS                 VK IA G  H   IT+ G L  +G
Sbjct: 819 HP----------KQIEALS--------------SKKVKDIAIGSLHCMAITEDGELYGWG 854

Query: 326 WGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDG 371
               GQ G  S  +   P  +  + G  I GVA G   T   +S G
Sbjct: 855 RNEQGQLGNPSISNFTEPTLIGGMEGKNIIGVACGPTQTFAWTSGG 900



 Score = 44.3 bits (103), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 3/79 (3%)

Query: 47   RDVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
            + VC   CG  F++A++ S ++ TWG  D     + T   H   P+         IV  A
Sbjct: 3710 QKVCQIECGAQFSLALTKSGQVWTWGKGDYFRLGHGTDA-HVRKPQIVEGLKGKKIVHVA 3768

Query: 105  AGWAHCVAVTEGGEVYTWG 123
             G  HC+AVT+ G+V+ WG
Sbjct: 3769 VGALHCLAVTDSGQVFAWG 3787



 Score = 42.0 bits (97), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 5/73 (6%)

Query: 53   GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
            G  F++A++ S  + TWG  D   LG     S  H   P          ++  A G  HC
Sbjct: 4714 GSQFSVALTKSGSVYTWGKGDYHRLGHG---SDDHVRRPRKVSALQNKKVIDVACGSLHC 4770

Query: 111  VAVTEGGEVYTWG 123
            VA T+ GEV++WG
Sbjct: 4771 VACTDTGEVFSWG 4783


>gi|301610125|ref|XP_002934599.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Xenopus
            (Silurana) tropicalis]
          Length = 4842

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/290 (28%), Positives = 128/290 (44%), Gaps = 79/290 (27%)

Query: 232  HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
            H++AL++ G+V+ WG G  G+LG G+  R    P  I  ++                   
Sbjct: 4074 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQ------------------- 4113

Query: 292  GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                   G  V  ++CG +HSAV+T  G L TFG G YG+ G G+T ++  P  V++L G
Sbjct: 4114 -------GEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4166

Query: 352  IQIEGVAAGLWHTICISSDGD-VYAFGGNQFGQLGTGGDQAETLPRLLDA---------- 400
            + I  VA GL HT+ +S+DG  V+AFG   +G+LG G   A++ P+ +D           
Sbjct: 4167 LHIGQVACGLNHTLAVSADGSLVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVA 4226

Query: 401  ----------------------------------------PSLENVHSKSVSCGARHTAV 420
                                                    P L  +    ++ GA HT  
Sbjct: 4227 CGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQLVPVLLGIFIDDIAVGAEHTLA 4286

Query: 421  IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHT 469
            ++  G+V+ WG N  GQLGLG       P+ VT ++G   R ++ G  H+
Sbjct: 4287 LSASGEVYAWGSNSEGQLGLGHTNHVREPTLVTALQGKNIRQISAGRCHS 4336



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 60/172 (34%), Positives = 97/172 (56%), Gaps = 6/172 (3%)

Query: 303  KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
            + + CG   + VI   G +L  G G YG+ GQG++DD      +S+L G  +  +     
Sbjct: 4011 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4070

Query: 363  ---HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
               H++ ++  G+V+++G   +G+LG G    +  PR ++A   E V    +SCG +H+A
Sbjct: 4071 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEV--VQMSCGFKHSA 4128

Query: 420  VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
            V+  DGK+F +G   YG+LGLG+  ++ +P +VT +EG     VACG  HTL
Sbjct: 4129 VVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGLHIGQVACGLNHTL 4180



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 111/395 (28%), Positives = 163/395 (41%), Gaps = 79/395 (20%)

Query: 41   TVGSAWRDVCGGGCGFAMAISD--------SRKLITWGSTDDLGQSYVTSGKHGEIPEPF 92
            +   A + +CG  C F +  +         S   +  G++DDL    V S   G +    
Sbjct: 4006 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVV--- 4062

Query: 93   PLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQS 152
                   +V +     H +A+TE GEV++WG  +       +G L  G   D+    RQ 
Sbjct: 4063 -----TQLVTSCGSDGHSMALTESGEVFSWGDGD-------YGKLGHGNS-DRQRRPRQ- 4108

Query: 153  SFLTEQVSPRSQVSRSSGGTSSGT---DGR----GSGEEGSKRRRISLAKQTAESSSSGD 205
                E +     V  S G   S     DG+    G+G+ G    R+ L          G+
Sbjct: 4109 ---IEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYG----RLGL----------GN 4151

Query: 206  ENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQ-VWGWGYGGEGQLGLGSRIRMVSS 264
             +    P  VT   G+ I  VA G  HTLA+S  G  VW +G G  G+LGLG+     SS
Sbjct: 4152 TSNKKLPERVTALEGLHIGQVACGLNHTLAVSADGSLVWAFGDGDYGKLGLGNSTAK-SS 4210

Query: 265  PHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTF 324
            P  +  +                           G  +K +ACG + S  +T  G + TF
Sbjct: 4211 PQKVDVL--------------------------CGIGIKKVACGTQFSVALTKDGHVYTF 4244

Query: 325  GWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQL 384
            G        +G   +   P  V  LLGI I+ +A G  HT+ +S+ G+VYA+G N  GQL
Sbjct: 4245 GQDRLIGLPEGRARNHNRPQLVPVLLGIFIDDIAVGAEHTLALSASGEVYAWGSNSEGQL 4304

Query: 385  GTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            G G       P L+ A   +N+  + +S G  H+A
Sbjct: 4305 GLGHTNHVREPTLVTALQGKNI--RQISAGRCHSA 4337



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/273 (28%), Positives = 127/273 (46%), Gaps = 40/273 (14%)

Query: 204 GDENLSAFPCLV--TLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           G+ +   +P L+  TL  G  +  V+AG RH+ A+++ G+++ WG G  G+LG G     
Sbjct: 493 GNSSTQKYPKLIQGTLQ-GKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGD---- 547

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
            S+   IP +     KD S                     V  ++CG  H+  ++  G  
Sbjct: 548 -SNSRNIPTL----VKDISN--------------------VGEVSCGSSHTIALSKDGRT 582

Query: 322 L-TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
           + +FG G  G+ G G T+    P  V +L G+    V AG   ++ ++S G VYA+G   
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFTRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 381 FGQLGTGGDQAETL-PRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG 439
              LG G  +A  L P+L++   L       +S G  H   ++ D +V+ WG N  GQ G
Sbjct: 642 -ACLGCGSSEATALRPKLIE--ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 440 LGDVI-DRNIPSQVT-IEGCVPRNVACGWWHTL 470
            G+       P +V+ ++G   + ++ G  H+L
Sbjct: 699 QGNSTGPITKPKKVSGLDGVAIQQISAGTSHSL 731



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 115/241 (47%), Gaps = 34/241 (14%)

Query: 236 LSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF 295
           +S+  +V+ WG     QL  G++ +++  P   PC   +                     
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQ-PKLAPCFSDA--------------------- 405

Query: 296 RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
                  + I  G   + VI+  G++   G G YG+ G G ++++ +   ++      I+
Sbjct: 406 -------QTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIK 458

Query: 356 GVAAGLW---HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVS 412
            V++      HT+  +++G+V+++G   +G+LG G    +  P+L+   +L+      VS
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQG-TLQGKVVVCVS 517

Query: 413 CGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
            G RH+A + +DG+++ WG   +G+LG GD   RNIP+ V     V   V+CG  HT+ L
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG-EVSCGSSHTIAL 576

Query: 473 A 473
           +
Sbjct: 577 S 577



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 113/251 (45%), Gaps = 31/251 (12%)

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
           T+ AG   T  +S  G V   G G  G+LGLG       S +     + ++   RS    
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLG------DSNNQSTLKKLTFEPHRSIKKV 460

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN 344
             S  S+G                  H+   T  G + ++G G YG+ G G++  +  P 
Sbjct: 461 SSSKGSDG------------------HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPK 502

Query: 345 CVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSL 403
            +  +L G  +  V+AG  H+  ++ DG++Y +G   FG+LG G   +  +P L+    +
Sbjct: 503 LIQGTLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK--DI 560

Query: 404 ENVHSKSVSCGARHTAVIADDGK-VFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRN 461
            NV    VSCG+ HT  ++ DG+ V+ +G    G+LG GD      P  V  ++G   R 
Sbjct: 561 SNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFTRK 618

Query: 462 VACGWWHTLLL 472
           V  G   +L L
Sbjct: 619 VCAGSQSSLAL 629



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 84/326 (25%), Positives = 126/326 (38%), Gaps = 71/326 (21%)

Query: 52  GGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEAS-----IVKAAAG 106
           G  G  +A +   ++ +WG  D     Y   G      + +P   + +     +V  +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGTLQGKVVVCVSAG 519

Query: 107 WAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVS 166
           + H  AVTE GE+YTWG  +       FG L  G     D   R    L + +S   +VS
Sbjct: 520 YRHSAAVTEDGELYTWGEGD-------FGRLGHG-----DSNSRNIPTLVKDISNVGEVS 567

Query: 167 RSSGGTSS-GTDGR-----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPG 220
             S  T +   DGR     G G+ G                  GD N    P +V    G
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKL--------------GHGDTNRVYKPKVVEALQG 613

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           +    V AG + +LAL+  GQV+ WG G    LG GS       P  I            
Sbjct: 614 MFTRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE----------- 660

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                           +    +  I+ G  H   ++    +  +G    GQCGQG++   
Sbjct: 661 ---------------ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGP 705

Query: 341 LS-PNCVSSLLGIQIEGVAAGLWHTI 365
           ++ P  VS L G+ I+ ++AG  H++
Sbjct: 706 ITKPKKVSGLDGVAIQQISAGTSHSL 731


>gi|440904418|gb|ELR54938.1| E3 ISG15--protein ligase HERC5, partial [Bos grunniens mutus]
          Length = 1009

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/201 (34%), Positives = 104/201 (51%), Gaps = 27/201 (13%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI------PCIESSYG 276
           I  +  G  H+LALS  G+++ WG   +GQLG+G      S+P  +      P ++ S G
Sbjct: 124 IIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISAG 183

Query: 277 KDRSAALSRG------------------SVNSEGPGF--RVPGNYVKGIACGGRHSAVIT 316
           +  S ALS                    + N + P     +    V+ +ACGG H+A++T
Sbjct: 184 EAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKDSPSCIETLDDQKVEFLACGGCHTALLT 243

Query: 317 DAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD-GDVYA 375
            +G + TFG G YGQ G  ST +EL P  V+ L+G ++  +A G  HT+   SD G V++
Sbjct: 244 KSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHTLAYVSDTGKVFS 303

Query: 376 FGGNQFGQLGTGGDQAETLPR 396
           FG  + GQLG GG + + +PR
Sbjct: 304 FGSGKEGQLGNGGTRNQLIPR 324



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 106/254 (41%), Gaps = 58/254 (22%)

Query: 97  EASIVKAAAGWAHCVAVTEGGEVYTWGWKE--CVPSGRVFGDLSTGTGLDKDVFERQSSF 154
           E +I++   G  H +A+++GGE++ WG      +  GR+F   ST      ++ E  S  
Sbjct: 121 EKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTST-----PEIVENLSGV 175

Query: 155 LTEQVS---PRSQVSRSSGGTSS-GTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSA 210
              Q+S     S     SG   S G +  G         ++ L     + S S       
Sbjct: 176 PLVQISAGEAHSMALSMSGNVYSWGRNDCG---------QLGLGHTYNKDSPS------- 219

Query: 211 FPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPC 270
             C+ TL+   ++  +A GG HT  L+  G V+ +G G  GQLG                
Sbjct: 220 --CIETLDDQ-KVEFLACGGCHTALLTKSGLVFTFGDGKYGQLG---------------- 260

Query: 271 IESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHS-AVITDAGALLTFGWGLY 329
             +S   +    L  G V          GN V  IACG +H+ A ++D G + +FG G  
Sbjct: 261 -HNSTQNELRPRLVTGLV----------GNRVTQIACGRQHTLAYVSDTGKVFSFGSGKE 309

Query: 330 GQCGQGSTDDELSP 343
           GQ G G T ++L P
Sbjct: 310 GQLGNGGTRNQLIP 323



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 105/234 (44%), Gaps = 45/234 (19%)

Query: 47  RDVCGGGCG--FAMAISDSRKLITWGSTDD----LGQSYVTSGKHGEIPEPFPLPTEASI 100
           +++    CG   ++A+S   +L  WG   D    +G+ + ++      PE     +   +
Sbjct: 122 KNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTS----TPEIVENLSGVPL 177

Query: 101 VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
           V+ +AG AH +A++  G VY+WG  +C       G L  G   +KD     S    E + 
Sbjct: 178 VQISAGEAHSMALSMSGNVYSWGRNDC-------GQLGLGHTYNKD-----SPSCIETLD 225

Query: 161 PRSQVSRSSGGTSSGTDGR-------GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPC 213
            +     + GG  +    +       G G+ G          Q   +S+  +      P 
Sbjct: 226 DQKVEFLACGGCHTALLTKSGLVFTFGDGKYG----------QLGHNSTQNELR----PR 271

Query: 214 LVTLNPGVRIATVAAGGRHTLA-LSDIGQVWGWGYGGEGQLGL-GSRIRMVSSP 265
           LVT   G R+  +A G +HTLA +SD G+V+ +G G EGQLG  G+R +++  P
Sbjct: 272 LVTGLVGNRVTQIACGRQHTLAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIPRP 325



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 86/213 (40%), Gaps = 52/213 (24%)

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
           + + C  R  A +   GA      G + Q   GS D    P C+     ++I  +  G  
Sbjct: 41  RQMCCTRRRLAALERGGA------GFH-QLPAGS-DGARKPKCIKLGKKMKIHSMDQGEE 92

Query: 363 HTICISSD----------------------------------------GDVYAFGGNQFG 382
           H + +SSD                                        G+++A+G N  G
Sbjct: 93  HMLVLSSDGKPFEYKYSIEHARFQCILQEKNIIQITCGDYHSLALSKGGELFAWGQNLDG 152

Query: 383 QLGTGGDQAET-LPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
           QLG G   A T  P +++  +L  V    +S G  H+  ++  G V+ WG N  GQLGLG
Sbjct: 153 QLGVGRIFASTSTPEIVE--NLSGVPLVQISAGEAHSMALSMSGNVYSWGRNDCGQLGLG 210

Query: 442 DVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLA 473
              +++ PS + T++      +ACG  HT LL 
Sbjct: 211 HTYNKDSPSCIETLDDQKVEFLACGGCHTALLT 243


>gi|405345706|ref|ZP_11022499.1| RCC1 repeat domain protein [Chondromyces apiculatus DSM 436]
 gi|397093755|gb|EJJ24452.1| RCC1 repeat domain protein [Myxococcus sp. (contaminant ex DSM
           436)]
          Length = 747

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 112/373 (30%), Positives = 162/373 (43%), Gaps = 61/373 (16%)

Query: 101 VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
           V   AG+ H VA+   G  ++WG         VFG L   T                +++
Sbjct: 351 VTLVAGFRHSVALGADGTAWSWG-------DNVFGQLGDTT-------------FQPRMA 390

Query: 161 PRSQVSRSSGGTSSGTDGR-GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
           P  QV+  + G +  T G+  +   G+  R  +          +G +  S+ P  V L  
Sbjct: 391 P-VQVTGLALGRADATSGQLHTVMLGANGRLWAWGDNNQGQLGNGTQQNSSLPLPVNLTG 449

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
              I +V++G RHT AL   G VW WG    GQLG G+R    S+P  +P +        
Sbjct: 450 ---ITSVSSGHRHTAALRLDGTVWSWGTNQYGQLGDGTRTDR-STPVQVPGLTG------ 499

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDD 339
                                 V  IA G  HS  +   G +  +G+  YGQ G G+T D
Sbjct: 500 ----------------------VTSIATGDYHSLALRSNGTVWGWGFNRYGQLGDGTTVD 537

Query: 340 ELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLD 399
              P  VS L    I  +AAG  H++ + SDG V+AFG N  GQLG G      LP  + 
Sbjct: 538 RTQPVQVSGL--TNIVSIAAGGGHSLALRSDGTVWAFGYNFDGQLGNGTRTWTILP--VQ 593

Query: 400 APSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVP 459
           A  L NV   S++ G  ++  +  DG V+ WG+N  GQLG+G      +P QV+    + 
Sbjct: 594 AVGLGNV--VSLAAGKMYSLALRADGTVWAWGYNASGQLGVGTTQGSAVPLQVSGLSAIT 651

Query: 460 RNVACGWWHTLLL 472
            ++  G +H+L L
Sbjct: 652 -SITAGTYHSLAL 663



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 132/473 (27%), Positives = 199/473 (42%), Gaps = 78/473 (16%)

Query: 57  AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEG 116
           ++A+     +  WG  + LGQ  +  G   +   P  +   AS V  AAG  + +A+ E 
Sbjct: 62  SLAVHSEGTVFAWG-FNRLGQ--LGDGTTQDKAAPVQVAGVASAVSVAAGDQYSLALDEN 118

Query: 117 GEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGT 176
           G+V+ WG           G L  GT L      R+ S LT+ VS  S  + +    + GT
Sbjct: 119 GDVWAWG-------DNASGQLGDGT-LTPRAQPRRVSGLTQGVSLASGFAHAVALRADGT 170

Query: 177 -----DGRGSGEEGSKRRRIS-----------LAKQTAESSSS------------GDENL 208
                D R S + GS     S           +    A  SSS            GD   
Sbjct: 171 VWAWGDNR-SNQLGSATLTRSPVPIPVPGLSDIVAVVAGGSSSLALRADGTVWAWGDNRY 229

Query: 209 SAFPCLVTLNPG--VRIAT------VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR 260
                  T+     VR+A       ++AG  H LAL   G  W WGY   GQLG G+ ++
Sbjct: 230 GQLGDGTTVRRAAPVRVANLDAVTHISAGAYHALALRADGTAWAWGYNAFGQLGDGTTVQ 289

Query: 261 MVSSPHPIPCIES--------------------SYGKDRSAALSRGSVNSEGPGFRVPGN 300
             + P  I   E+                    ++G +R   L  G++ S          
Sbjct: 290 R-TLPVLIGLTETRTVVAGNYHSLAVRTDGAVWAWGDNRYRQLGTGNLTSSAVPLHAGMT 348

Query: 301 YVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAG 360
               +  G RHS  +   G   ++G  ++GQ G  +    ++P  V+ L   + +  +  
Sbjct: 349 GGVTLVAGFRHSVALGADGTAWSWGDNVFGQLGDTTFQPRMAPVQVTGLALGRADATSGQ 408

Query: 361 LWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
           L HT+ + ++G ++A+G N  GQLG G  Q  +LP  ++   +      SVS G RHTA 
Sbjct: 409 L-HTVMLGANGRLWAWGDNNQGQLGNGTQQNSSLPLPVNLTGI-----TSVSSGHRHTAA 462

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
           +  DG V+ WG N+YGQLG G   DR+ P QV  + G    ++A G +H+L L
Sbjct: 463 LRLDGTVWSWGTNQYGQLGDGTRTDRSTPVQVPGLTGVT--SIATGDYHSLAL 513



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 83/257 (32%), Positives = 123/257 (47%), Gaps = 30/257 (11%)

Query: 219 PGVR-IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS---RIRMVSSPHPIPCIESS 274
           PG+  + ++A G  H+LAL   G VWGWG+   GQLG G+   R + V        +  +
Sbjct: 495 PGLTGVTSIATGDYHSLALRSNGTVWGWGFNRYGQLGDGTTVDRTQPVQVSGLTNIVSIA 554

Query: 275 YGKDRSAAL-SRGSVNSEGPGFR------------VP------GNYVKGIACGGRHSAVI 315
            G   S AL S G+V + G  F             +P      GN V  +A G  +S  +
Sbjct: 555 AGGGHSLALRSDGTVWAFGYNFDGQLGNGTRTWTILPVQAVGLGNVVS-LAAGKMYSLAL 613

Query: 316 TDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYA 375
              G +  +G+   GQ G G+T     P  VS L    I  + AG +H++ + SDG V+A
Sbjct: 614 RADGTVWAWGYNASGQLGVGTTQGSAVPLQVSGL--SAITSITAGTYHSLALRSDGWVWA 671

Query: 376 FGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKY 435
           +G N  GQLG G       P L+ + S    ++ ++  G  H+  +  DG ++ WG N +
Sbjct: 672 WGFNFEGQLGNGTSDNRLTPGLVVSMS----NATAIFAGDLHSLAVRADGTLWAWGLNSH 727

Query: 436 GQLGLGDVIDRNIPSQV 452
           GQLG GD ++   P QV
Sbjct: 728 GQLGTGDTVEAWFPVQV 744



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 160/383 (41%), Gaps = 63/383 (16%)

Query: 91  PFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFER 150
           P  +    ++   +AG  H +A+   G  + WG+         FG L  GT       +R
Sbjct: 243 PVRVANLDAVTHISAGAYHALALRADGTAWAWGYN-------AFGQLGDGT-----TVQR 290

Query: 151 QSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSA 210
               L      R+ V+ +    +  TDG       ++ R++           +G+   SA
Sbjct: 291 TLPVLIGLTETRTVVAGNYHSLAVRTDGAVWAWGDNRYRQL----------GTGNLTSSA 340

Query: 211 FPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPC 270
            P    +  GV   T+ AG RH++AL   G  W WG    GQLG          P   P 
Sbjct: 341 VPLHAGMTGGV---TLVAGFRHSVALGADGTAWSWGDNVFGQLG-----DTTFQPRMAPV 392

Query: 271 IESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
             +     R+ A S                       G  H+ ++   G L  +G    G
Sbjct: 393 QVTGLALGRADATS-----------------------GQLHTVMLGANGRLWAWGDNNQG 429

Query: 331 QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
           Q G G+  +   P  V +L G  I  V++G  HT  +  DG V+++G NQ+GQLG G   
Sbjct: 430 QLGNGTQQNSSLPLPV-NLTG--ITSVSSGHRHTAALRLDGTVWSWGTNQYGQLGDGTRT 486

Query: 391 AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
             + P  +  P L  V   S++ G  H+  +  +G V+ WG+N+YGQLG G  +DR  P 
Sbjct: 487 DRSTP--VQVPGLTGV--TSIATGDYHSLALRSNGTVWGWGFNRYGQLGDGTTVDRTQPV 542

Query: 451 QVT-IEGCVPRNVACGWWHTLLL 472
           QV+ +   V  ++A G  H+L L
Sbjct: 543 QVSGLTNIV--SIAAGGGHSLAL 563



 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 78/275 (28%), Positives = 121/275 (44%), Gaps = 36/275 (13%)

Query: 219 PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES----- 273
           P VR+A    G  H+LA+   G V+ WG+   GQLG G+  +  ++P  +  + S     
Sbjct: 51  PPVRLAV---GQYHSLAVHSEGTVFAWGFNRLGQLGDGT-TQDKAAPVQVAGVASAVSVA 106

Query: 274 ----------------SYGKDRSAALSRGSVNSEGPGFRVPGNYVKGI--ACGGRHSAVI 315
                           ++G + S  L  G++       RV G   +G+  A G  H+  +
Sbjct: 107 AGDQYSLALDENGDVWAWGDNASGQLGDGTLTPRAQPRRVSG-LTQGVSLASGFAHAVAL 165

Query: 316 TDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYA 375
              G +  +G     Q G  +      P  V  L    I  V AG   ++ + +DG V+A
Sbjct: 166 RADGTVWAWGDNRSNQLGSATLTRSPVPIPVPGL--SDIVAVVAGGSSSLALRADGTVWA 223

Query: 376 FGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKY 435
           +G N++GQLG G       P  +   +L+ V    +S GA H   +  DG  + WG+N +
Sbjct: 224 WGDNRYGQLGDGTTVRRAAP--VRVANLDAV--THISAGAYHALALRADGTAWAWGYNAF 279

Query: 436 GQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTL 470
           GQLG G  + R +P  V I     R V  G +H+L
Sbjct: 280 GQLGDGTTVQRTLP--VLIGLTETRTVVAGNYHSL 312



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 78/307 (25%), Positives = 115/307 (37%), Gaps = 55/307 (17%)

Query: 68  TWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKEC 127
           +WG T+  GQ  +  G   +   P  +P    +   A G  H +A+   G V+ WG+   
Sbjct: 471 SWG-TNQYGQ--LGDGTRTDRSTPVQVPGLTGVTSIATGDYHSLALRSNGTVWGWGFNR- 526

Query: 128 VPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRS----QVSRSSGGTSSGTDGRGSGE 183
                 +G L  GT +D+     Q S LT  VS  +     ++  S GT         G+
Sbjct: 527 ------YGQLGDGTTVDR-TQPVQVSGLTNIVSIAAGGGHSLALRSDGTVWAFGYNFDGQ 579

Query: 184 EGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVW 243
            G+  R  ++    A    +                   + ++AAG  ++LAL   G VW
Sbjct: 580 LGNGTRTWTILPVQAVGLGN-------------------VVSLAAGKMYSLALRADGTVW 620

Query: 244 GWGYGGEGQLGLGSRI-----RMVSSPHPIPCIES---------------SYGKDRSAAL 283
            WGY   GQLG+G+         VS    I  I +               ++G +    L
Sbjct: 621 AWGYNASGQLGVGTTQGSAVPLQVSGLSAITSITAGTYHSLALRSDGWVWAWGFNFEGQL 680

Query: 284 SRG-SVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
             G S N   PG  V  +    I  G  HS  +   G L  +G   +GQ G G T +   
Sbjct: 681 GNGTSDNRLTPGLVVSMSNATAIFAGDLHSLAVRADGTLWAWGLNSHGQLGTGDTVEAWF 740

Query: 343 PNCVSSL 349
           P  V  L
Sbjct: 741 PVQVQGL 747


>gi|298713261|emb|CBJ26957.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 530

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 109/390 (27%), Positives = 162/390 (41%), Gaps = 61/390 (15%)

Query: 100 IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTG-LDKDVFERQSSFLTEQ 158
           IV   AG      +T  GEVY+ G+           +   G G +D+ V E   S    +
Sbjct: 46  IVGVTAGNELTAVLTNTGEVYSCGYNS---------EGQCGIGEIDETVPEMVPSL--TK 94

Query: 159 VSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLS--------- 209
           V+ R    R +G  S    G GS         + +  +  E  + G  N           
Sbjct: 95  VTLREPSFRPAGRVSLVHSGNGS-------EHLVVVTEEGELQTCGRNNSGQLGHGEVGK 147

Query: 210 --AFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHP 267
             + P  V    G R+  VA    HT+ ++D  + W +G  G GQLG G      S+P  
Sbjct: 148 GYSLPRPVAGFAGYRVTKVACSYSHTVVVTDDDRTWTFGGNGYGQLGHGDHSSR-SAPAA 206

Query: 268 IPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWG 327
           + C +                          G  V  +ACG  H+ V   +G L +FG  
Sbjct: 207 LACFQ--------------------------GLGVLSVACGVYHTVVSVASGGLYSFGKN 240

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG 387
            +GQ G    +   +P    +   + +E +A G +HT+ +S  G+V AFG N +GQLG G
Sbjct: 241 DHGQLGLEGGESRFTPVQHRACTSV-VEQLACGYYHTVALSRAGEVVAFGRNDYGQLGLG 299

Query: 388 GDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
               E+  +    P L  +    V+CG+ HT  + D+G+V+ +G N +GQLG G   D  
Sbjct: 300 --HRESTWQGGQVPDLAGLRIIQVACGSYHTISLDDEGRVYPFGRNNHGQLGTGTREDAC 357

Query: 448 IPSQVT-IEGCVPRNVACGWWHTLLLAVPP 476
            P  V  +       VA G++HTL L  PP
Sbjct: 358 RPCFVEGLSQSFVCQVAAGFYHTLCLTGPP 387



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 87/273 (31%), Positives = 119/273 (43%), Gaps = 22/273 (8%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
           GD      P L   + G  I  V AG   T  L++ G+V+  GY  EGQ G+G     V 
Sbjct: 27  GDTLERHTPTLSQTSRGKDIVGVTAGNELTAVLTNTGEVYSCGYNSEGQCGIGEIDETV- 85

Query: 264 SPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGG--RHSAVITDAGAL 321
            P  +P              S   V    P FR P   V  +  G    H  V+T+ G L
Sbjct: 86  -PEMVP--------------SLTKVTLREPSFR-PAGRVSLVHSGNGSEHLVVVTEEGEL 129

Query: 322 LTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
            T G    GQ G G      S P  V+   G ++  VA    HT+ ++ D   + FGGN 
Sbjct: 130 QTCGRNNSGQLGHGEVGKGYSLPRPVAGFAGYRVTKVACSYSHTVVVTDDDRTWTFGGNG 189

Query: 381 FGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL 440
           +GQLG G   + + P  L     + +   SV+CG  HT V    G ++ +G N +GQLGL
Sbjct: 190 YGQLGHGDHSSRSAPAAL--ACFQGLGVLSVACGVYHTVVSVASGGLYSFGKNDHGQLGL 247

Query: 441 GDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
                R  P Q      V   +ACG++HT+ L+
Sbjct: 248 EGGESRFTPVQHRACTSVVEQLACGYYHTVALS 280



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 96/399 (24%), Positives = 151/399 (37%), Gaps = 65/399 (16%)

Query: 18  GYLPGALPQRSPILSPLVVRLP--LTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDL 75
           G +   +P+  P L+ + +R P     G       G G    + +++  +L T G  +  
Sbjct: 79  GEIDETVPEMVPSLTKVTLREPSFRPAGRVSLVHSGNGSEHLVVVTEEGELQTCGRNNSG 138

Query: 76  GQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFG 135
              +   GK   +P P        + K A  ++H V VT+    +T+G       G  +G
Sbjct: 139 QLGHGEVGKGYSLPRPVAGFAGYRVTKVACSYSHTVVVTDDDRTWTFG-------GNGYG 191

Query: 136 DLSTGTGLDKDVFERQSSFLTEQVSP------RSQVSRSSGGTSS-GTDGRGS-GEEGSK 187
            L  G    +      + F    V         + VS +SGG  S G +  G  G EG +
Sbjct: 192 QLGHGDHSSRSAPAALACFQGLGVLSVACGVYHTVVSVASGGLYSFGKNDHGQLGLEGGE 251

Query: 188 RRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGY 247
            R   +  +   S                      +  +A G  HT+ALS  G+V  +G 
Sbjct: 252 SRFTPVQHRACTSV---------------------VEQLACGYYHTVALSRAGEVVAFGR 290

Query: 248 GGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIAC 307
              GQLGLG R             ES++   +   L+         G R+       +AC
Sbjct: 291 NDYGQLGLGHR-------------ESTWQGGQVPDLA---------GLRI-----IQVAC 323

Query: 308 GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI 367
           G  H+  + D G +  FG   +GQ G G+ +D   P  V  L    +  VAAG +HT+C+
Sbjct: 324 GSYHTISLDDEGRVYPFGRNNHGQLGTGTREDACRPCFVEGLSQSFVCQVAAGFYHTLCL 383

Query: 368 SSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENV 406
           +        G      +      +  L RLL+ PS  +V
Sbjct: 384 TGPPLERKAGHGSAFVVRDSKSLSSDLYRLLNNPSQSDV 422



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 79/167 (47%), Gaps = 18/167 (10%)

Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
           L  FG    G+ G G T +  +P    +  G  I GV AG   T  +++ G+VY+ G N 
Sbjct: 13  LYGFGQNACGELGLGDTLERHTPTLSQTSRGKDIVGVTAGNELTAVLTNTGEVYSCGYNS 72

Query: 381 FGQLGTGGDQAETLPRLLDAPSLENVHSKSVSC-------------GARHTAVIADDGKV 427
            GQ G  G+  ET+P ++  PSL  V  +  S              G+ H  V+ ++G++
Sbjct: 73  EGQCGI-GEIDETVPEMV--PSLTKVTLREPSFRPAGRVSLVHSGNGSEHLVVVTEEGEL 129

Query: 428 FCWGWNKYGQLGLGDV-IDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
              G N  GQLG G+V    ++P  V    G     VAC + HT+++
Sbjct: 130 QTCGRNNSGQLGHGEVGKGYSLPRPVAGFAGYRVTKVACSYSHTVVV 176



 Score = 45.1 bits (105), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 3/81 (3%)

Query: 372 DVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWG 431
           ++Y FG N  G+LG G       P L      +++    V+ G   TAV+ + G+V+  G
Sbjct: 12  ELYGFGQNACGELGLGDTLERHTPTLSQTSRGKDI--VGVTAGNELTAVLTNTGEVYSCG 69

Query: 432 WNKYGQLGLGDVIDRNIPSQV 452
           +N  GQ G+G+ ID  +P  V
Sbjct: 70  YNSEGQCGIGE-IDETVPEMV 89


>gi|326522674|dbj|BAJ88383.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1092

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 62/171 (36%), Positives = 97/171 (56%), Gaps = 4/171 (2%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ I+CGGRH+ ++T  G + ++G    G+ G G   D   P  + +L  + IE VA G 
Sbjct: 313 VQNISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCDVPQPKLIDALAHMNIELVACGE 372

Query: 362 WHTICISSDGDVYAFGGN--QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
           +HT  ++  GD+Y +G     FG  G G + +  +P+ L+ P LE +H  S+SCG  HTA
Sbjct: 373 YHTCAVTLSGDLYTWGNGTFNFGLSGHGNEVSHWMPKRLNGP-LEGIHVSSISCGPWHTA 431

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
           V+   G++F +G   +G LG GD    ++P +V +++G      ACG WHT
Sbjct: 432 VVTSAGQLFTFGDGSFGVLGHGDRQSISVPREVESLKGLRTVRAACGVWHT 482



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/268 (28%), Positives = 122/268 (45%), Gaps = 42/268 (15%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G+ +++++ G  HT  ++  GQ++ +G G  G LG G R + +S P  +  ++       
Sbjct: 417 GIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDR-QSISVPREVESLK------- 468

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDA------------GALLTFGWG 327
                         G R     V+  ACG  H+A + +             G + T+G G
Sbjct: 469 --------------GLRT----VRA-ACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDG 509

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG 387
             G+ G G  +  L P CV+SL+      VA G   T+ +++ G VY  G + +GQLG  
Sbjct: 510 DKGRLGHGDKETRLVPTCVASLVEPNFCQVACGHCFTVALTTSGHVYTMGSSVYGQLGN- 568

Query: 388 GDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
             QA+ +        L     + +SCGA H AV+    +V+ WG    G+LG GD  DRN
Sbjct: 569 -PQADGMVPARVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRN 627

Query: 448 IPSQV-TIEGCVPRNVACGWWHTLLLAV 474
            P+ V  ++    R+V CG   T  + +
Sbjct: 628 SPTLVEALKDKQVRSVVCGINFTAAICI 655



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 81/277 (29%), Positives = 122/277 (44%), Gaps = 45/277 (16%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P L+     + I  VA G  HT A++  G ++ WG  G    GL                
Sbjct: 354 PKLIDALAHMNIELVACGEYHTCAVTLSGDLYTWG-NGTFNFGL---------------- 396

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
            S +G + S  + +      GP   + G +V  I+CG  H+AV+T AG L TFG G +G 
Sbjct: 397 -SGHGNEVSHWMPK---RLNGP---LEGIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGV 449

Query: 332 CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI------------SSDGDVYAFGGN 379
            G G       P  V SL G++    A G+WHT  +             S G ++ +G  
Sbjct: 450 LGHGDRQSISVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDG 509

Query: 380 QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG 439
             G+LG G  +   +P  +   SL   +   V+CG   T  +   G V+  G + YGQLG
Sbjct: 510 DKGRLGHGDKETRLVPTCV--ASLVEPNFCQVACGHCFTVALTTSGHVYTMGSSVYGQLG 567

Query: 440 LGDVIDRNIPSQVTIEGCVPRN----VACGWWHTLLL 472
                D  +P++V  EG + +N    ++CG +H  +L
Sbjct: 568 -NPQADGMVPARV--EGKLHKNFVEEISCGAYHVAVL 601



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 76/143 (53%), Gaps = 8/143 (5%)

Query: 335 GSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL 394
           G+  D L P  +     + ++ ++ G  H   ++  G+VY++G    G+LG G D     
Sbjct: 294 GAKMDCLVPKPLEFAGRLDVQNISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCDVPQ 353

Query: 395 PRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWG---WNKYGQLGLGDVIDRNIPSQ 451
           P+L+DA  L +++ + V+CG  HT  +   G ++ WG   +N +G  G G+ +   +P +
Sbjct: 354 PKLIDA--LAHMNIELVACGEYHTCAVTLSGDLYTWGNGTFN-FGLSGHGNEVSHWMPKR 410

Query: 452 VT--IEGCVPRNVACGWWHTLLL 472
           +   +EG    +++CG WHT ++
Sbjct: 411 LNGPLEGIHVSSISCGPWHTAVV 433


>gi|322795832|gb|EFZ18511.1| hypothetical protein SINV_14428 [Solenopsis invicta]
          Length = 786

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 88/303 (29%), Positives = 133/303 (43%), Gaps = 80/303 (26%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++   V++GG+H +ALS  G V+ WG G +G+LG G+++              SY  DR 
Sbjct: 14  IKKVAVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKV--------------SY--DRP 57

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
             +             + G  +  IACGG HSA IT AG L T+G G YG+ G G +DD+
Sbjct: 58  KLIED-----------LLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQ 106

Query: 341 LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           L P  V +L   ++  VA  +G   T+C++ D +V+++G   +G+LG GG     +P  +
Sbjct: 107 LRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKI 166

Query: 399 DA--------------------------------------------------PSLENVHS 408
           D+                                                   +L+    
Sbjct: 167 DSLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKI 226

Query: 409 KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWW 467
            S++ G+ H    +D G+VF WG N  GQLG G     + P  V  ++G     VACG  
Sbjct: 227 ISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHALQGKKITRVACGSA 286

Query: 468 HTL 470
           HTL
Sbjct: 287 HTL 289



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 108/234 (46%), Gaps = 29/234 (12%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS-----RIRMVSSPH 266
           P L+    GV I  +A GG H+ A++  G ++ WG G  G+LG G      R ++V +  
Sbjct: 57  PKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQ 116

Query: 267 PIPCIESSYGKDRSAAL--------------SRGSVNSEGP-GFRVP-------GNYVKG 304
               I+ + G   +  L                G +   G  G +VP       G  V  
Sbjct: 117 DYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVVK 176

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           + CG + S  +T +GA+ T+G G Y + G G+ D    P  V++L G +I  +A G  H 
Sbjct: 177 VECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHC 236

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
           +  S  G+V+ +G N  GQLG G   A   PRL+ A  L+      V+CG+ HT
Sbjct: 237 VACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHA--LQGKKITRVACGSAHT 288



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 121/301 (40%), Gaps = 56/301 (18%)

Query: 101 VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFL-TEQV 159
           V  ++G  HC+A++  G VY+WG  +        G L  G  +  D  +     L  E V
Sbjct: 17  VAVSSGGKHCIALSSEGHVYSWGEGDD-------GKLGHGNKVSYDRPKLIEDLLGVEIV 69

Query: 160 SPRSQVSRSSGGTSSG---TDGRGS-GEEGSKRRRISLAKQTAESSSSGDENLSAFPCLV 215
                   S+  TS+G   T G+G  G  G                  GD +    P +V
Sbjct: 70  DIACGGHHSAAITSAGWLYTWGKGRYGRLGH-----------------GDSDDQLRPKVV 112

Query: 216 TLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLG----SRIRM-VSSPHPI 268
                 ++  VA  +G   TL ++D   VW WG G  G+LG G     ++ + + S   +
Sbjct: 113 EALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGL 172

Query: 269 PCIESSYGKDRSAALSR-GSVNSEGPG------------FRVP-------GNYVKGIACG 308
             ++   G   S AL+R G+V + G G             R P       G  +  IA G
Sbjct: 173 GVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATG 232

Query: 309 GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICIS 368
             H    +D G + T+G    GQ G G+T     P  V +L G +I  VA G  HT+  S
Sbjct: 233 SLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHALQGKKITRVACGSAHTLAWS 292

Query: 369 S 369
           +
Sbjct: 293 T 293



 Score = 40.4 bits (93), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 8/92 (8%)

Query: 37  RLPLTVGS-AWRDVCGGGCG--FAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEP 91
           ++PL + S A   V    CG  F++A++ S  + TWG  D   LG     +  H   P  
Sbjct: 161 KVPLKIDSLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHG---TDDHVRRPRK 217

Query: 92  FPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
                   I+  A G  HCVA ++ GEV+TWG
Sbjct: 218 VAALQGKKIISIATGSLHCVACSDKGEVFTWG 249



 Score = 38.5 bits (88), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 1/77 (1%)

Query: 394 LPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT 453
           +P LL++     +   +VS G +H   ++ +G V+ WG    G+LG G+ +  + P  + 
Sbjct: 2   IPTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVSYDRPKLIE 61

Query: 454 -IEGCVPRNVACGWWHT 469
            + G    ++ACG  H+
Sbjct: 62  DLLGVEIVDIACGGHHS 78


>gi|198421625|ref|XP_002120080.1| PREDICTED: similar to mCG130390, partial [Ciona intestinalis]
          Length = 1609

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/214 (35%), Positives = 109/214 (50%), Gaps = 30/214 (14%)

Query: 222  RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
            ++AT      H +AL++ G+V+ WG G  G+LG G+  R    P  I  +          
Sbjct: 836  QLATSTGSDGHAIALTENGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALR--------- 885

Query: 282  ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL 341
                             G  V  +ACG +HSAV+T  G L TFG+G YG+ G GST ++ 
Sbjct: 886  -----------------GQEVVQVACGFKHSAVVTIDGKLFTFGYGDYGRLGHGSTTNKK 928

Query: 342  SPNCVSSLLGIQIEGVAAGLWHTICISSDG-DVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
             P  V +L    I  VA GL HT+ +S D   V+A G   +G+LG GG  A+T P  ++ 
Sbjct: 929  IPERVMALENYIIGQVACGLNHTVIVSQDNLTVWACGDGDYGKLGIGGTSAKTSPTKIEV 988

Query: 401  PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNK 434
              L  V  K +SCGA+ TA +  DGK+F +G ++
Sbjct: 989  --LSRVGIKKISCGAQFTAALTWDGKLFMFGQDR 1020



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 108/198 (54%), Gaps = 11/198 (5%)

Query: 285 RGSVNSEGPGFRVPG-----NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDD 339
            G +   G G  VP      +  + + CG   + +I + G +L+ G G YG+ GQG++DD
Sbjct: 760 HGQLAEVGSGVLVPQLTKSFHEARKVVCGQNCTFIINNNGVVLSCGEGSYGRLGQGNSDD 819

Query: 340 ELSPNCVSSLLGIQIEGVAAGLW---HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPR 396
                 +S+L G  ++ +A       H I ++ +G+V+++G   +G+LG G    +  PR
Sbjct: 820 SNRLTHISALQGFIVKQLATSTGSDGHAIALTENGEVFSWGDGDYGKLGHGNSDRQRRPR 879

Query: 397 LLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IE 455
            ++A  L       V+CG +H+AV+  DGK+F +G+  YG+LG G   ++ IP +V  +E
Sbjct: 880 QIEA--LRGQEVVQVACGFKHSAVVTIDGKLFTFGYGDYGRLGHGSTTNKKIPERVMALE 937

Query: 456 GCVPRNVACGWWHTLLLA 473
             +   VACG  HT++++
Sbjct: 938 NYIIGQVACGLNHTVIVS 955



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 105/405 (25%), Positives = 164/405 (40%), Gaps = 85/405 (20%)

Query: 34   LVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLIT----------WGSTDDLGQSYVTSG 83
            LV +L  +   A + VCG  C F   I+++  +++           G++DD  +    S 
Sbjct: 771  LVPQLTKSFHEARKVVCGQNCTFI--INNNGVVLSCGEGSYGRLGQGNSDDSNRLTHISA 828

Query: 84   KHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGL 143
              G I +     T +          H +A+TE GEV++WG  +       +G L  G   
Sbjct: 829  LQGFIVKQLATSTGSD--------GHAIALTENGEVFSWGDGD-------YGKLGHGNS- 872

Query: 144  DKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGT---DGR----GSGEEGSKRRRISLAKQ 196
            D+    RQ     E +  +  V  + G   S     DG+    G G+ G      +  K+
Sbjct: 873  DRQRRPRQ----IEALRGQEVVQVACGFKHSAVVTIDGKLFTFGYGDYGRLGHGSTTNKK 928

Query: 197  TAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS-DIGQVWGWGYGGEGQLGL 255
              E   + +  +              I  VA G  HT+ +S D   VW  G G  G+LG+
Sbjct: 929  IPERVMALENYI--------------IGQVACGLNHTVIVSQDNLTVWACGDGDYGKLGI 974

Query: 256  GSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVI 315
            G      +SP  I              LSR  +              K I+CG + +A +
Sbjct: 975  GG-TSAKTSPTKIE------------VLSRVGI--------------KKISCGAQFTAAL 1007

Query: 316  TDAGALLTFGWG-LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVY 374
            T  G L  FG   + G C +  T    +P  V++L    I  ++ G  HTI ++S G VY
Sbjct: 1008 TWDGKLFMFGQDRMCGNC-ETRTSPSFNPQVVTALSSHHIIDISVGAEHTIALTSKGIVY 1066

Query: 375  AFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
             +G N  GQLG G       P L+++ S +N+  + +S G  H+A
Sbjct: 1067 TWGSNTDGQLGLGHTNHVQEPTLVESLSGKNI--RQISAGRTHSA 1109



 Score = 39.7 bits (91), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 6/93 (6%)

Query: 372 DVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWG 431
           DVY FG  + GQL   G     +P+L  +       ++ V CG   T +I ++G V   G
Sbjct: 751 DVYLFGAGRHGQLAEVG-SGVLVPQLTKSFH----EARKVVCGQNCTFIINNNGVVLSCG 805

Query: 432 WNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVA 463
              YG+LG G+  D N  + ++ ++G + + +A
Sbjct: 806 EGSYGRLGQGNSDDSNRLTHISALQGFIVKQLA 838


>gi|348575702|ref|XP_003473627.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Cavia
           porcellus]
          Length = 1080

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 85/252 (33%), Positives = 119/252 (47%), Gaps = 13/252 (5%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGL-GSR--IRMVSSPHPIPCIESSYGKDR 279
           I  V+ G  HTLAL+D GQV+ WG   +GQLGL GS   IR+      +P  ++   K+ 
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRKSIFMPVDKNIRIKEC 145

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STD 338
               SR S  S       P +++           V   A  +  +G   YGQ G G    
Sbjct: 146 KKTASRKSWVSTLCSELAPDSHL------AESGQVAVSASEVFCWGQNKYGQLGLGIDCK 199

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            + SP  + SLLGI    VAAG  H+  ++  G ++ +G N+FGQLG   +    +P LL
Sbjct: 200 KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPYLL 259

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGC 457
              SL +     + CG  HTA +  +G VF +G   YGQLG         P +V  + G 
Sbjct: 260 K--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 317

Query: 458 VPRNVACGWWHT 469
           +   +ACG  HT
Sbjct: 318 IVTQIACGRQHT 329



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 107/368 (29%), Positives = 154/368 (41%), Gaps = 68/368 (18%)

Query: 42  VGSAWRDVCGGGCGF--AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEAS 99
           +    RDV   GCG    + + D   + T G  +DLGQ  +   K  + PE        +
Sbjct: 32  INKKVRDV---GCGLRHTVFVLDDGTVYTCGC-NDLGQ--LGHEKSRKKPEQVVALDAQN 85

Query: 100 IVKAAAGWAHCVAVTEGGEVYTWGW-----------KEC--VPSGRVFGDLSTGTGLD-- 144
           IV  + G AH +A+ + G+VY WG            +EC  VP   +F  +     +   
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRKSIFMPVDKNIRIKEC 145

Query: 145 KDVFERQS--SFLTEQVSPRSQVSRSSGGTSSGTDGR--GSGEEGSKRRRISLAKQTAES 200
           K    R+S  S L  +++P S ++ S     S ++    G  + G     I   KQT+  
Sbjct: 146 KKTASRKSWVSTLCSELAPDSHLAESGQVAVSASEVFCWGQNKYGQLGLGIDCKKQTS-- 203

Query: 201 SSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR 260
                      P L+    G+    VAAGG H+  L+  G ++GWG    GQLGL     
Sbjct: 204 -----------PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE-- 250

Query: 261 MVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA 320
                            DR       S+ S+          +  I CG  H+A +T  G 
Sbjct: 251 ----------------NDRYVPYLLKSLRSQK---------IVYICCGEDHTAALTKEGG 285

Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT-ICISSDGDVYAFGGN 379
           + TFG G YGQ G  ST  E++P  V  L+G  +  +A G  HT   + S G +Y+FG  
Sbjct: 286 VFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 345

Query: 380 QFGQLGTG 387
             GQLGTG
Sbjct: 346 GNGQLGTG 353



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 44/122 (36%), Positives = 64/122 (52%), Gaps = 6/122 (4%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      +  ++  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 439 GL 440
           GL
Sbjct: 117 GL 118



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 88/197 (44%), Gaps = 26/197 (13%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLG-TGGDQAETLPRL-LDAPSLENVHSKSVSCGA---- 415
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  P  +N+  K     A    
Sbjct: 94  AHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRKSIFMPVDKNIRIKECKKTASRKS 153

Query: 416 ------------RHTA----VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGC 457
                        H A    V     +VFCWG NKYGQLGLG    +    Q+  ++ G 
Sbjct: 154 WVSTLCSELAPDSHLAESGQVAVSASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGI 213

Query: 458 VPRNVACGWWHTLLLAV 474
               VA G  H+ +L +
Sbjct: 214 PFMQVAAGGAHSFVLTL 230



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 37/97 (38%), Positives = 45/97 (46%), Gaps = 3/97 (3%)

Query: 377 GGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYG 436
           G   FGQLG GG   E +     +    N   + V CG RHT  + DDG V+  G N  G
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 437 QLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
           QLG      R  P QV  ++      V+CG  HTL L
Sbjct: 65  QLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLAL 99


>gi|325185931|emb|CCA20435.1| hypothetical protein VOLCADRAFT_70529 [Albugo laibachii Nc14]
          Length = 388

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/247 (31%), Positives = 115/247 (46%), Gaps = 42/247 (17%)

Query: 202 SSGDENLSAFPCLVT---LNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR 258
           S+ + N     C+++   +   + +  V+AG  H+L L    ++W WG    G+LGLG  
Sbjct: 139 SNSNSNSQLPNCIISPMRIAFSINVINVSAGFGHSLLLDQHHRLWTWGRNSNGELGLGQS 198

Query: 259 IRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDA 318
            R + S      ++++                E P        +  IA G  HSA I+  
Sbjct: 199 FRDIKSVQSPQLVKAT---------------EEEP--------LHLIATGYAHSAAISLT 235

Query: 319 GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG--------IQIEGVAAGLWHTICISSD 370
           G L TFGWGLY Q G G++ D      + +  G        I+I  VA G WHT   +S 
Sbjct: 236 GQLYTFGWGLYHQLGHGNSQDLHELTRIQAFDGIRDDQAVPIRITSVACGTWHTAVCTSS 295

Query: 371 GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPS------LENVHSKSVSCGARHTAVIADD 424
           GD+Y +G N+ GQLG  G  ++  P ++ +        LENV  K V CG RHT  + + 
Sbjct: 296 GDLYTWGWNENGQLGHLGKASKISPCVVSSQDAAIQTLLENV--KDVVCGNRHTTALCEG 353

Query: 425 GKVFCWG 431
           GKVF WG
Sbjct: 354 GKVFHWG 360



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 113/267 (42%), Gaps = 45/267 (16%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP-CIESSYGKDRSAALS 284
           +A G  H +A+S  G ++ WG     Q+G   R+   +S   +P CI S        A S
Sbjct: 109 IACGWHHAIAISK-GCMYAWGSNAFDQIG---RVSNSNSNSQLPNCIISPM----RIAFS 160

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL--- 341
              +N               ++ G  HS ++     L T+G    G+ G G +  ++   
Sbjct: 161 INVIN---------------VSAGFGHSLLLDQHHRLWTWGRNSNGELGLGQSFRDIKSV 205

Query: 342 -SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ-AETLPRLLD 399
            SP  V +     +  +A G  H+  IS  G +Y FG   + QLG G  Q    L R+  
Sbjct: 206 QSPQLVKATEEEPLHLIATGYAHSAAISLTGQLYTFGWGLYHQLGHGNSQDLHELTRIQA 265

Query: 400 APSLEN-----VHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG-LGD--------VID 445
              + +     +   SV+CG  HTAV    G ++ WGWN+ GQLG LG         V  
Sbjct: 266 FDGIRDDQAVPIRITSVACGTWHTAVCTSSGDLYTWGWNENGQLGHLGKASKISPCVVSS 325

Query: 446 RNIPSQVTIEGCVPRNVACGWWHTLLL 472
           ++   Q  +E    ++V CG  HT  L
Sbjct: 326 QDAAIQTLLENV--KDVVCGNRHTTAL 350



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 91/347 (26%), Positives = 141/347 (40%), Gaps = 55/347 (15%)

Query: 49  VCGGGCGFAMAISDSRKLITWGST--DDLGQSYVTSGK-HGEIPEPFPLPTEASIV--KA 103
           +CGG   F +A++D+ +LI WGS    +LG    T+ + H     P  L    S+   + 
Sbjct: 51  ICGGET-FCLALNDANQLIGWGSAFYGELGPEKATTEECHVICVRPHVLFPSFSLEWERI 109

Query: 104 AAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRS 163
           A GW H +A+++G  +Y WG       GRV    S     +  +   + +F    ++  +
Sbjct: 110 ACGWHHAIAISKGC-MYAWGSNAFDQIGRVSNSNSNSQLPNCIISPMRIAFSINVINVSA 168

Query: 164 QVSRS---SGGTSSGTDGRGSGEE---GSKRRRISLAKQTAESSSSGDENLSAFPCLVTL 217
               S          T GR S  E   G   R I   +                P LV  
Sbjct: 169 GFGHSLLLDQHHRLWTWGRNSNGELGLGQSFRDIKSVQS---------------PQLVKA 213

Query: 218 NPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYG- 276
                +  +A G  H+ A+S  GQ++ +G+G   QLG G+   +    H +  I++  G 
Sbjct: 214 TEEEPLHLIATGYAHSAAISLTGQLYTFGWGLYHQLGHGNSQDL----HELTRIQAFDGI 269

Query: 277 KDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGS 336
           +D  A   R                +  +ACG  H+AV T +G L T+GW   GQ G   
Sbjct: 270 RDDQAVPIR----------------ITSVACGTWHTAVCTSSGDLYTWGWNENGQLGHLG 313

Query: 337 TDDELSPNCVSS------LLGIQIEGVAAGLWHTICISSDGDVYAFG 377
              ++SP  VSS       L   ++ V  G  HT  +   G V+ +G
Sbjct: 314 KASKISPCVVSSQDAAIQTLLENVKDVVCGNRHTTALCEGGKVFHWG 360



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 67/323 (20%), Positives = 114/323 (35%), Gaps = 102/323 (31%)

Query: 30  ILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDD----LGQSYVTSGKH 85
           I+SP+ +   + V +        G G ++ +    +L TWG   +    LGQS+    K 
Sbjct: 151 IISPMRIAFSINVINV-----SAGFGHSLLLDQHHRLWTWGRNSNGELGLGQSF-RDIKS 204

Query: 86  GEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDK 145
            + P+      E  +   A G+AH  A++  G++YT+GW        ++  L  G   D 
Sbjct: 205 VQSPQLVKATEEEPLHLIATGYAHSAAISLTGQLYTFGWG-------LYHQLGHGNSQDL 257

Query: 146 DVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGD 205
               R  +F                                                 G 
Sbjct: 258 HELTRIQAF------------------------------------------------DGI 269

Query: 206 ENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSP 265
            +  A P  +T        +VA G  HT   +  G ++ WG+   GQLG   +   +S  
Sbjct: 270 RDDQAVPIRIT--------SVACGTWHTAVCTSSGDLYTWGWNENGQLGHLGKASKIS-- 319

Query: 266 HPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFG 325
              PC+                V+S+    +     VK + CG RH+  + + G +  F 
Sbjct: 320 ---PCV----------------VSSQDAAIQTLLENVKDVVCGNRHTTALCEGGKV--FH 358

Query: 326 WGLYGQCGQGSTDDELSPNCVSS 348
           WGL       ++ DE+  + ++S
Sbjct: 359 WGLQ------ASSDEIDAHVIAS 375


>gi|432863735|ref|XP_004070156.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
           latipes]
          Length = 1080

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/209 (35%), Positives = 102/209 (48%), Gaps = 27/209 (12%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR-IRMVSSPH------PIPCIE 272
           G+ +  VA G +HT+ LS  GQV+ WG    GQLGLG      +SSP        +P ++
Sbjct: 121 GITVTQVACGSQHTVVLSKDGQVYTWGQNSRGQLGLGKEGCSSISSPQCVRSLSSMPVVQ 180

Query: 273 SSYGKDRSAALS-RGSV-----------------NSEGPGFRVPGNYVKGI--ACGGRHS 312
            S G D S ALS  GSV                 + E P      N  K +  ACG  H+
Sbjct: 181 VSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDTTDRETPTLVHYLNMKKTVFAACGKDHT 240

Query: 313 AVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGD 372
           AV+T  G + TFG G YGQ G  S  + L P  V+ L G ++  +A G +HT+ ++    
Sbjct: 241 AVLTMDGTVFTFGSGHYGQLGHNSFRNALCPRLVAELWGAKVTKIACGRYHTLVLTDHMK 300

Query: 373 VYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           VY+FG N+ GQLG   +    +P  +  P
Sbjct: 301 VYSFGCNEHGQLGPREETHPCVPLPVQLP 329



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 66/195 (33%), Positives = 95/195 (48%), Gaps = 11/195 (5%)

Query: 288 VNSEGPGFR------VPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST--DD 339
           V+S  P F       + G  V  +ACG +H+ V++  G + T+G    GQ G G      
Sbjct: 104 VDSPHPPFTPRSLEALSGITVTQVACGSQHTVVLSKDGQVYTWGQNSRGQLGLGKEGCSS 163

Query: 340 ELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLD 399
             SP CV SL  + +  V+AG  H+  +S  G V+ +G N  GQLG G       P L+ 
Sbjct: 164 ISSPQCVRSLSSMPVVQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDTTDRETPTLVH 223

Query: 400 APSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCV 458
             +++   +   +CG  HTAV+  DG VF +G   YGQLG     +   P  V  + G  
Sbjct: 224 YLNMKK--TVFAACGKDHTAVLTMDGTVFTFGSGHYGQLGHNSFRNALCPRLVAELWGAK 281

Query: 459 PRNVACGWWHTLLLA 473
              +ACG +HTL+L 
Sbjct: 282 VTKIACGRYHTLVLT 296



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/175 (35%), Positives = 85/175 (48%), Gaps = 6/175 (3%)

Query: 303 KGIACGGRHSAV-ITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           K + C  R +AV  TD G  L    G+       S     +P  + +L GI +  VA G 
Sbjct: 74  KFVECEERLAAVGCTDDGVTLLSDTGVVFCVD--SPHPPFTPRSLEALSGITVTQVACGS 131

Query: 362 WHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
            HT+ +S DG VY +G N  GQLG G +   ++       SL ++    VS G  H+  +
Sbjct: 132 QHTVVLSKDGQVYTWGQNSRGQLGLGKEGCSSISSPQCVRSLSSMPVVQVSAGGDHSFAL 191

Query: 422 ADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNV--ACGWWHTLLLAV 474
           +  G VF WG N  GQLGLGD  DR  P+ V     + + V  ACG  HT +L +
Sbjct: 192 SVSGSVFGWGRNDCGQLGLGDTTDRETPTLVHYLN-MKKTVFAACGKDHTAVLTM 245



 Score = 40.8 bits (94), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 67/162 (41%), Gaps = 33/162 (20%)

Query: 100 IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQV 159
           +V+ +AG  H  A++  G V+ WG  +C       G L  G     D  +R++  L   +
Sbjct: 178 VVQVSAGGDHSFALSVSGSVFGWGRNDC-------GQLGLG-----DTTDRETPTLVHYL 225

Query: 160 SPRSQVSRSSGGTSSGT---DGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFP 212
           + +  V  + G   +     DG     GSG  G          Q   +S       +  P
Sbjct: 226 NMKKTVFAACGKDHTAVLTMDGTVFTFGSGHYG----------QLGHNSFRN----ALCP 271

Query: 213 CLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG 254
            LV    G ++  +A G  HTL L+D  +V+ +G    GQLG
Sbjct: 272 RLVAELWGAKVTKIACGRYHTLVLTDHMKVYSFGCNEHGQLG 313


>gi|386813626|ref|ZP_10100850.1| conserved hypothetical protein [planctomycete KSU-1]
 gi|386403123|dbj|GAB63731.1| conserved hypothetical protein [planctomycete KSU-1]
          Length = 407

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 111/392 (28%), Positives = 168/392 (42%), Gaps = 67/392 (17%)

Query: 94  LPTEAS-IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQS 152
           +P  AS I++ + G  H +A+   G V TWG         + G L  GT  D+ +     
Sbjct: 53  IPIFASTILQVSGGSFHSIALKSDGTVLTWG-------QNMHGQLGDGTNTDRKI----- 100

Query: 153 SFLTEQVSPRSQVSRSSGG-------TSSGTDGR-GSGEEGSKRRRISLAKQTAESSSSG 204
                QV   + V+  +GG       TS GT    GS   G                  G
Sbjct: 101 ---PVQVKDLNNVTAIAGGAWHSVALTSDGTVWTWGSNWAGQL----------------G 141

Query: 205 DENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR---- 260
           D    +    V +N    I  +A+ G H LAL   G VW WG    GQLG G+       
Sbjct: 142 DGTTKSRNKPVQVNNLKNITAIASKGLHNLALKSDGTVWTWGRNIYGQLGDGTTTDRNTP 201

Query: 261 -MVSSPHPIPCIES---------------SYGKDRSAALSRGSVNSEGPGFRVPG-NYVK 303
               S + I  I                 ++G ++   L  G++ +      V G   V 
Sbjct: 202 VQTRSLNTIISIAGGGYHSLAQKADGTIWTWGLNQYGQLGDGTITNRTIPVLVNGIKDVS 261

Query: 304 GIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWH 363
            I CGG HS V+ + G +  +G+  +GQ G  STD+  +P  +  L  I    +  G  H
Sbjct: 262 MIRCGGDHSIVLKNNGTIWIWGFNQHGQLGDRSTDNRSTPVPMGDLKNIMT--IDGGGDH 319

Query: 364 TICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
           ++ + SDG V+ +G N+ GQLG G   +   P  + A +L NV   +++ G +H+  +  
Sbjct: 320 SLILKSDGTVWTWGNNENGQLGDGTTMSRATP--IQASTLSNV--TAIASGEQHSIALKS 375

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
           DG ++ WG N+ GQLG G + +R+ P  V I+
Sbjct: 376 DGTIWAWGSNRNGQLGDGSISNRSTPVLVKIK 407



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 92/177 (51%), Gaps = 9/177 (5%)

Query: 296 RVP--GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ 353
           R+P   + +  ++ G  HS  +   G +LT+G  ++GQ G G+  D   P  V  L    
Sbjct: 52  RIPIFASTILQVSGGSFHSIALKSDGTVLTWGQNMHGQLGDGTNTDRKIPVQVKDLN--N 109

Query: 354 IEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSC 413
           +  +A G WH++ ++SDG V+ +G N  GQLG G  ++   P  +   +L+N+   +++ 
Sbjct: 110 VTAIAGGAWHSVALTSDGTVWTWGSNWAGQLGDGTTKSRNKP--VQVNNLKNI--TAIAS 165

Query: 414 GARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTL 470
              H   +  DG V+ WG N YGQLG G   DRN P Q      +  ++A G +H+L
Sbjct: 166 KGLHNLALKSDGTVWTWGRNIYGQLGDGTTTDRNTPVQTRSLNTII-SIAGGGYHSL 221



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 112/251 (44%), Gaps = 38/251 (15%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  H++AL   G V  WG    GQLG G+                    DR   
Sbjct: 60  ILQVSGGSFHSIALKSDGTVLTWGQNMHGQLGDGTN------------------TDRKIP 101

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
           +    +N+           V  IA G  HS  +T  G + T+G    GQ G G+T     
Sbjct: 102 VQVKDLNN-----------VTAIAGGAWHSVALTSDGTVWTWGSNWAGQLGDGTTKSRNK 150

Query: 343 PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPS 402
           P  V++L    I  +A+   H + + SDG V+ +G N +GQLG G       P  +   S
Sbjct: 151 PVQVNNLK--NITAIASKGLHNLALKSDGTVWTWGRNIYGQLGDGTTTDRNTP--VQTRS 206

Query: 403 LENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRN- 461
           L  +   S++ G  H+     DG ++ WG N+YGQLG G + +R IP  V + G    + 
Sbjct: 207 LNTI--ISIAGGGYHSLAQKADGTIWTWGLNQYGQLGDGTITNRTIP--VLVNGIKDVSM 262

Query: 462 VACGWWHTLLL 472
           + CG  H+++L
Sbjct: 263 IRCGGDHSIVL 273



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 91/361 (25%), Positives = 146/361 (40%), Gaps = 81/361 (22%)

Query: 50  CGGGCGFAMAISDSRKLITWGST--DDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGW 107
             GG   ++A++    + TWGS     LG     S       +P  +    +I   A+  
Sbjct: 113 IAGGAWHSVALTSDGTVWTWGSNWAGQLGDGTTKSRN-----KPVQVNNLKNITAIASKG 167

Query: 108 AHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSP----RS 163
            H +A+   G V+TWG         ++G L  GT  D++    Q+  L   +S       
Sbjct: 168 LHNLALKSDGTVWTWG-------RNIYGQLGDGTTTDRNT-PVQTRSLNTIISIAGGGYH 219

Query: 164 QVSRSSGGT--SSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGV 221
            +++ + GT  + G +  G   +G+   R                     P LV    G+
Sbjct: 220 SLAQKADGTIWTWGLNQYGQLGDGTITNR-------------------TIPVLVN---GI 257

Query: 222 R-IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           + ++ +  GG H++ L + G +W WG+   GQLG                       DRS
Sbjct: 258 KDVSMIRCGGDHSIVLKNNGTIWIWGFNQHGQLG-----------------------DRS 294

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIAC---GGRHSAVITDAGALLTFGWGLYGQCGQGST 337
                   N   P   VP   +K I     GG HS ++   G + T+G    GQ G G+T
Sbjct: 295 TD------NRSTP---VPMGDLKNIMTIDGGGDHSLILKSDGTVWTWGNNENGQLGDGTT 345

Query: 338 DDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
               +P   S+L    +  +A+G  H+I + SDG ++A+G N+ GQLG G     + P L
Sbjct: 346 MSRATPIQASTLS--NVTAIASGEQHSIALKSDGTIWAWGSNRNGQLGDGSISNRSTPVL 403

Query: 398 L 398
           +
Sbjct: 404 V 404


>gi|115476524|ref|NP_001061858.1| Os08g0430700 [Oryza sativa Japonica Group]
 gi|38175475|dbj|BAD01172.1| putative UVB-resistance protein UVR8 [Oryza sativa Japonica Group]
 gi|113623827|dbj|BAF23772.1| Os08g0430700 [Oryza sativa Japonica Group]
 gi|215734996|dbj|BAG95718.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222640598|gb|EEE68730.1| hypothetical protein OsJ_27407 [Oryza sativa Japonica Group]
          Length = 395

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 133/294 (45%), Gaps = 50/294 (17%)

Query: 196 QTAESSSSGDENLSA-FPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG 254
           + AE    G   L    P      P +++  VAAGG H++ L+  G VW WG     Q  
Sbjct: 131 EEAERKEDGTRALRRDIPIPQGCAPKLKVRQVAAGGTHSVVLTQDGHVWTWG-----QPW 185

Query: 255 LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAV 314
               I+ +S+P  +  +E+                            VK IA G  H+  
Sbjct: 186 PPGDIKQISTPVRVQGLEN----------------------------VKVIAVGAFHNLA 217

Query: 315 ITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVY 374
           +T+ G L  +G   YGQ G G T     P  V  L  + +  +AAG WH+  ++ +G+VY
Sbjct: 218 LTEDGILWAWGNNEYGQLGTGDTQPRSQPIRVEGLSDLSLVDIAAGGWHSTALTKEGEVY 277

Query: 375 AFGGNQFGQLGTGGDQ-AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWN 433
           A+G  + G+LG G D+ +  +P+ ++  + E++    VSCG  H+  +  DG++F +G  
Sbjct: 278 AWGRGEHGRLGFGDDKSSHMVPQKVELLAGEDI--IQVSCGGTHSVALTRDGRMFSYGRG 335

Query: 434 KYGQLGLGDVIDRNIPSQVTIEGCVP-------------RNVACGWWHTLLLAV 474
            +G+LG G  +    P +V I+   P             R VACG  HTL +A 
Sbjct: 336 DHGRLGYGRKVTTGHPMEVPIDLPPPGTSGGDSGGQWQARYVACGGRHTLAIAT 389



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 102/384 (26%), Positives = 151/384 (39%), Gaps = 69/384 (17%)

Query: 57  AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEG 116
           ++AI    +L TWG        +    K    P P       SIV+AA G  HC+AV + 
Sbjct: 56  SLAICADGRLFTWGWNQRGTLGHPPETKTESSPAPVDALAGVSIVQAAIGGWHCLAVDDK 115

Query: 117 GEVYTWGWKECVPSGRVFGDLSTGT-GLDKDVFERQSSFLTEQVSPRSQVSR-SSGGTSS 174
           G  Y WG  E    G        GT  L +D+       + +  +P+ +V + ++GGT S
Sbjct: 116 GRAYAWGGNEYGQCGEEAERKEDGTRALRRDI------PIPQGCAPKLKVRQVAAGGTHS 169

Query: 175 GTDGRGSGEEGSKRRRISLAKQT-----AESSSSGDENLSAFPCLVTLNPGVRIATVAAG 229
                           + L +        +    GD    + P  V     V++  +A G
Sbjct: 170 ----------------VVLTQDGHVWTWGQPWPPGDIKQISTPVRVQGLENVKV--IAVG 211

Query: 230 GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVN 289
             H LAL++ G +W WG    GQLG G      + P   P         R   LS  S+ 
Sbjct: 212 AFHNLALTEDGILWAWGNNEYGQLGTGD-----TQPRSQPI--------RVEGLSDLSLV 258

Query: 290 SEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDELSPNCVSS 348
                          IA GG HS  +T  G +  +G G +G+ G G      + P  V  
Sbjct: 259 D--------------IAAGGWHSTALTKEGEVYAWGRGEHGRLGFGDDKSSHMVPQKVEL 304

Query: 349 LLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL--LDAP----- 401
           L G  I  V+ G  H++ ++ DG ++++G    G+LG G       P    +D P     
Sbjct: 305 LAGEDIIQVSCGGTHSVALTRDGRMFSYGRGDHGRLGYGRKVTTGHPMEVPIDLPPPGTS 364

Query: 402 ---SLENVHSKSVSCGARHTAVIA 422
              S     ++ V+CG RHT  IA
Sbjct: 365 GGDSGGQWQARYVACGGRHTLAIA 388



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 91/225 (40%), Gaps = 54/225 (24%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDELSPNCVSSLLGIQIEGVAAG 360
           V  +  G R+S  I   G L T+GW   G  G    T  E SP  V +L G+ I   A G
Sbjct: 46  VSAVVAGSRNSLAICADGRLFTWGWNQRGTLGHPPETKTESSPAPVDALAGVSIVQAAIG 105

Query: 361 LWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLD---------APSLE------- 404
            WH + +   G  YA+GGN++GQ G   ++ E   R L          AP L+       
Sbjct: 106 GWHCLAVDDKGRAYAWGGNEYGQCGEEAERKEDGTRALRRDIPIPQGCAPKLKVRQVAAG 165

Query: 405 NVHS------------------------------------KSVSCGARHTAVIADDGKVF 428
             HS                                    K ++ GA H   + +DG ++
Sbjct: 166 GTHSVVLTQDGHVWTWGQPWPPGDIKQISTPVRVQGLENVKVIAVGAFHNLALTEDGILW 225

Query: 429 CWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
            WG N+YGQLG GD   R+ P +V  +      ++A G WH+  L
Sbjct: 226 AWGNNEYGQLGTGDTQPRSQPIRVEGLSDLSLVDIAAGGWHSTAL 270



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 52/166 (31%), Positives = 82/166 (49%), Gaps = 18/166 (10%)

Query: 320 ALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN 379
           A+L +G G  GQ G G  ++E     V++L  + +  V AG  +++ I +DG ++ +G N
Sbjct: 12  AVLAWGSGEDGQLGMGGYEEEDWARGVAALDALAVSAVVAGSRNSLAICADGRLFTWGWN 71

Query: 380 QFGQLGTGGD-QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           Q G LG   + + E+ P  +DA  L  V     + G  H   + D G+ + WG N+YGQ 
Sbjct: 72  QRGTLGHPPETKTESSPAPVDA--LAGVSIVQAAIGGWHCLAVDDKGRAYAWGGNEYGQC 129

Query: 439 GL--------GDVIDRNIPSQVTIEGCVP----RNVACGWWHTLLL 472
           G            + R+IP     +GC P    R VA G  H+++L
Sbjct: 130 GEEAERKEDGTRALRRDIP---IPQGCAPKLKVRQVAAGGTHSVVL 172



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 110/276 (39%), Gaps = 55/276 (19%)

Query: 47  RDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAG 106
           R V  GG   ++ ++    + TWG            G   +I  P  +    ++   A G
Sbjct: 160 RQVAAGGT-HSVVLTQDGHVWTWGQP-------WPPGDIKQISTPVRVQGLENVKVIAVG 211

Query: 107 WAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVS 166
             H +A+TE G ++ WG  E       +G L TG     D   R      E +S  S V 
Sbjct: 212 AFHNLALTEDGILWAWGNNE-------YGQLGTG-----DTQPRSQPIRVEGLSDLSLVD 259

Query: 167 RSSGG---TSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
            ++GG   T+   +G     G GE G    R+             D++    P  V L  
Sbjct: 260 IAAGGWHSTALTKEGEVYAWGRGEHG----RLGFGD---------DKSSHMVPQKVELLA 306

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G  I  V+ GG H++AL+  G+++ +G G  G+LG G   R V++ HP+           
Sbjct: 307 GEDIIQVSCGGTHSVALTRDGRMFSYGRGDHGRLGYG---RKVTTGHPMEVPIDLPPPGT 363

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVI 315
           S   S G   +            + +ACGGRH+  I
Sbjct: 364 SGGDSGGQWQA------------RYVACGGRHTLAI 387


>gi|351711668|gb|EHB14587.1| Putative E3 ubiquitin-protein ligase HERC5 [Heterocephalus glaber]
          Length = 800

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/204 (34%), Positives = 109/204 (53%), Gaps = 12/204 (5%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++I ++  G  H L LS  G+ + + Y  E      +R + +     I  I+ + G   S
Sbjct: 1   MKIHSMDQGAEHLLVLSSDGKAFEYSYSMEP-----ARFQSILQEKGI--IQIACGDYHS 53

Query: 281 AALSRGSVNSEGPGFRVPGNY-VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDD 339
            ALS+  V        VP N  V+ +ACGG H+A++T  G + TFG G YGQ G  ST +
Sbjct: 54  LALSK--VTDSPSLVEVPDNQKVECVACGGAHTALLTQDGLMFTFGAGKYGQLGHNSTKN 111

Query: 340 ELSPNCVSSLLGIQIEGVAAGLWHTICISSDGD-VYAFGGNQFGQLGTGGDQAETLPRLL 398
           EL P  V+ L G ++  +A G WHT+  +SD D V++FG  + GQLG GG   + +P  +
Sbjct: 112 ELRPRLVTELSGNRVTQIACGRWHTLAYASDLDKVFSFGFGEEGQLGNGGKHNQLIPLPV 171

Query: 399 DAPSLENVHSKSVSCGARHTAVIA 422
            +PS E++  +S  C  +   +IA
Sbjct: 172 KSPSNEDLQFES-HCSGKELIMIA 194



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 66/140 (47%), Gaps = 18/140 (12%)

Query: 352 IQIEGVAAGLWHTICISSDGDVYAFGGNQ-------------FGQLGTGGDQAETLPRLL 398
           ++I  +  G  H + +SSDG  + +  +                Q+  G   +  L ++ 
Sbjct: 1   MKIHSMDQGAEHLLVLSSDGKAFEYSYSMEPARFQSILQEKGIIQIACGDYHSLALSKVT 60

Query: 399 DAPSL----ENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT- 453
           D+PSL    +N   + V+CG  HTA++  DG +F +G  KYGQLG     +   P  VT 
Sbjct: 61  DSPSLVEVPDNQKVECVACGGAHTALLTQDGLMFTFGAGKYGQLGHNSTKNELRPRLVTE 120

Query: 454 IEGCVPRNVACGWWHTLLLA 473
           + G     +ACG WHTL  A
Sbjct: 121 LSGNRVTQIACGRWHTLAYA 140



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 69/142 (48%), Gaps = 6/142 (4%)

Query: 309 GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICIS 368
            R  +++ + G ++    G Y         D  SP+ V      ++E VA G  HT  ++
Sbjct: 32  ARFQSILQEKG-IIQIACGDYHSLALSKVTD--SPSLVEVPDNQKVECVACGGAHTALLT 88

Query: 369 SDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD-GKV 427
            DG ++ FG  ++GQLG    + E  PRL+   S   V    ++CG  HT   A D  KV
Sbjct: 89  QDGLMFTFGAGKYGQLGHNSTKNELRPRLVTELSGNRV--TQIACGRWHTLAYASDLDKV 146

Query: 428 FCWGWNKYGQLGLGDVIDRNIP 449
           F +G+ + GQLG G   ++ IP
Sbjct: 147 FSFGFGEEGQLGNGGKHNQLIP 168



 Score = 42.0 bits (97), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 1/48 (2%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLAL-SDIGQVWGWGYGGEGQLGLGSR 258
           P LVT   G R+  +A G  HTLA  SD+ +V+ +G+G EGQLG G +
Sbjct: 115 PRLVTELSGNRVTQIACGRWHTLAYASDLDKVFSFGFGEEGQLGNGGK 162


>gi|330837709|ref|YP_004412350.1| chromosome condensation regulator RCC1 [Sphaerochaeta coccoides DSM
           17374]
 gi|329749612|gb|AEC02968.1| regulator of chromosome condensation RCC1 [Sphaerochaeta coccoides
           DSM 17374]
          Length = 783

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/257 (32%), Positives = 125/257 (48%), Gaps = 41/257 (15%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           V+I +V+AG  HT+ L + G +W  G    GQLG+G  I                  DRS
Sbjct: 416 VKIKSVSAGDTHTMILKEDGTLWATGQNNYGQLGVGDTI------------------DRS 457

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                       P   + G  VK IA G  H+ ++ + G L   G   YGQ G G+T   
Sbjct: 458 T-----------PVQIMTG--VKEIAAGSTHTMILKEDGTLWATGRNTYGQLGVGAT--- 501

Query: 341 LSPNCVSSLLGIQ--IEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLP-RL 397
             P   S+ + I   ++ ++AG  HT+ +  +G ++A G N +GQLG G     + P ++
Sbjct: 502 --PTQTSAPVQIMTGVKEISAGSTHTMILKENGTLWATGRNNYGQLGVGDTTNRSTPVQV 559

Query: 398 LDAP--SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
            D+   S+     K+VS GA HT ++ ++G ++  G N Y QL  G  ID+NIP QV   
Sbjct: 560 WDSANGSVFMTGVKAVSAGASHTMILKENGTLWATGRNFYYQLADGTKIDKNIPVQVISM 619

Query: 456 GCVPRNVACGWWHTLLL 472
           G     V+ G +HT++L
Sbjct: 620 GSDVEAVSAGTYHTMIL 636



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 111/235 (47%), Gaps = 31/235 (13%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  ++AG  HT+ L + G +W  G    GQLG+G      +   P+   +S+        
Sbjct: 515 VKEISAGSTHTMILKENGTLWATGRNNYGQLGVGDT---TNRSTPVQVWDSA-------- 563

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
              GSV   G         VK ++ G  H+ ++ + G L   G   Y Q   G+  D+  
Sbjct: 564 --NGSVFMTG---------VKAVSAGASHTMILKENGTLWATGRNFYYQLADGTKIDKNI 612

Query: 343 PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPS 402
           P  V S+ G  +E V+AG +HT+ +  + +++A G NQ GQLG       + P  + A +
Sbjct: 613 PVQVISM-GSDVEAVSAGTYHTMILKKNRELWAVGNNQSGQLGDNTQTTRSSPVQVKAST 671

Query: 403 LEN---VHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI 454
           + N   +  ++VS    HT ++  +G ++  G N  GQLG+G       P+Q++I
Sbjct: 672 ILNDFMIDVEAVSIWDYHTIILKKNGTLWATGNNSSGQLGIGAT-----PAQISI 721



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 40/104 (38%), Positives = 56/104 (53%), Gaps = 8/104 (7%)

Query: 374 YAFGGNQFGQLGTG-----GDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVF 428
           Y FGG      G G     GD  E L + +   +   V  KSVS G  HT ++ +DG ++
Sbjct: 379 YYFGGWDTTSNGNGVQYAIGDTLEILDQDVTLYARWLVKIKSVSAGDTHTMILKEDGTLW 438

Query: 429 CWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
             G N YGQLG+GD IDR+ P Q+ + G   + +A G  HT++L
Sbjct: 439 ATGQNNYGQLGVGDTIDRSTPVQI-MTGV--KEIAAGSTHTMIL 479


>gi|356497843|ref|XP_003517766.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 388

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 104/379 (27%), Positives = 156/379 (41%), Gaps = 66/379 (17%)

Query: 87  EIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKD 146
             P+    P+ +SI   A G AH +A+T  G+V +WG      SG++   L     L   
Sbjct: 40  HFPQLLHQPSLSSISSLACGGAHVIALTSAGKVLSWGRGN---SGQLGHGLVVSNSLYPK 96

Query: 147 VFERQSSFLTEQVSP---RSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSS 203
                  +    VS     S     +G   +  DG   G+ G                  
Sbjct: 97  AVTSLDGYFITHVSAGWGHSGFVSDNGCVFTCGDGS-FGQLGH----------------- 138

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS-RIRMV 262
           GD      P  V+      +  VA G RH+L L    QV+G+G G  GQLG+ + R++ V
Sbjct: 139 GDHASHCSPVKVSCFVDQHVEQVACGMRHSLVLLKGNQVYGFGSGKRGQLGVSNDRVKSV 198

Query: 263 SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL 322
           + P  +   E                          G  + GIA  G HSA ++  G + 
Sbjct: 199 NVPKVVSGFE--------------------------GVEIAGIAANGDHSAAVSVDGHVY 232

Query: 323 TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFG 382
           T+G G  G       +D   P C++S L      VA G  H + +S +G+V   GGN  G
Sbjct: 233 TWGRGFKG------FEDARVPQCLNSSL--NFTKVALGWNHALAMSGEGEVCMLGGNHLG 284

Query: 383 QLGTGGD--QAETLPRLLDA-----PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKY 435
            L    +   A+ LP L +      P L+      ++ GA H+ ++ + G++  WGW ++
Sbjct: 285 VLSDLQNISPAKHLPHLREVNLEKVPGLDGTKITDIATGAEHSVIVTEHGEIKTWGWGEH 344

Query: 436 GQLGLGDVIDRNIPSQVTI 454
           GQLGLGD  DR  P  V++
Sbjct: 345 GQLGLGDTRDRISPVTVSL 363



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 110/263 (41%), Gaps = 33/263 (12%)

Query: 211 FPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPC 270
           FP L+       I+++A GG H +AL+  G+V  WG G  GQLG G  +     P  +  
Sbjct: 41  FPQLLHQPSLSSISSLACGGAHVIALTSAGKVLSWGRGNSGQLGHGLVVSNSLYPKAVTS 100

Query: 271 IESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
           ++                          G ++  ++ G  HS  ++D G + T G G +G
Sbjct: 101 LD--------------------------GYFITHVSAGWGHSGFVSDNGCVFTCGDGSFG 134

Query: 331 QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
           Q G G      SP  VS  +   +E VA G+ H++ +     VY FG  + GQLG   D+
Sbjct: 135 QLGHGDHASHCSPVKVSCFVDQHVEQVACGMRHSLVLLKGNQVYGFGSGKRGQLGVSNDR 194

Query: 391 AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
            +++         E V    ++    H+A ++ DG V+ WG       G     D  +P 
Sbjct: 195 VKSVNVPKVVSGFEGVEIAGIAANGDHSAAVSVDGHVYTWG------RGFKGFEDARVP- 247

Query: 451 QVTIEGCVPRNVACGWWHTLLLA 473
           Q          VA GW H L ++
Sbjct: 248 QCLNSSLNFTKVALGWNHALAMS 270



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 98/377 (25%), Positives = 152/377 (40%), Gaps = 55/377 (14%)

Query: 4   EGQEEKMERVVFMWGYLPGALPQR-SPILS----PLVVRLPLTVGSAWRDVCGGGCGFAM 58
           E +++K E    +W +  G   Q  + IL     P ++  P ++ S     CGG     +
Sbjct: 8   ENEDDKDESEQRVWSWGAGTEGQLGTKILQDEHFPQLLHQP-SLSSISSLACGGA--HVI 64

Query: 59  AISDSRKLITWG--STDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEG 116
           A++ + K+++WG  ++  LG   V S      P+         I   +AGW H   V++ 
Sbjct: 65  ALTSAGKVLSWGRGNSGQLGHGLVVSNS--LYPKAVTSLDGYFITHVSAGWGHSGFVSDN 122

Query: 117 GEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGT 176
           G V+T G          FG L  G         + S F+ + V   +   R S     G 
Sbjct: 123 GCVFTCG-------DGSFGQLGHGDHASHCSPVKVSCFVDQHVEQVACGMRHSLVLLKGN 175

Query: 177 DGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLAL 236
              G G    KR ++ ++    +S +         P +V+   GV IA +AA G H+ A+
Sbjct: 176 QVYGFGS--GKRGQLGVSNDRVKSVN--------VPKVVSGFEGVEIAGIAANGDHSAAV 225

Query: 237 SDIGQVWGWGYGGEG-----------------QLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           S  G V+ WG G +G                 ++ LG    +  S     C+        
Sbjct: 226 SVDGHVYTWGRGFKGFEDARVPQCLNSSLNFTKVALGWNHALAMSGEGEVCMLGGNHLGV 285

Query: 280 SAALSRGSVNSEGPGFR------VP---GNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
            + L   S     P  R      VP   G  +  IA G  HS ++T+ G + T+GWG +G
Sbjct: 286 LSDLQNISPAKHLPHLREVNLEKVPGLDGTKITDIATGAEHSVIVTEHGEIKTWGWGEHG 345

Query: 331 QCGQGSTDDELSPNCVS 347
           Q G G T D +SP  VS
Sbjct: 346 QLGLGDTRDRISPVTVS 362



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 4/103 (3%)

Query: 369 SDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVF 428
           S+  V+++G    GQLGT   Q E  P+LL  PSL ++   S++CG  H   +   GKV 
Sbjct: 16  SEQRVWSWGAGTEGQLGTKILQDEHFPQLLHQPSLSSI--SSLACGGAHVIALTSAGKVL 73

Query: 429 CWGWNKYGQLGLGDVIDRNI-PSQVT-IEGCVPRNVACGWWHT 469
            WG    GQLG G V+  ++ P  VT ++G    +V+ GW H+
Sbjct: 74  SWGRGNSGQLGHGLVVSNSLYPKAVTSLDGYFITHVSAGWGHS 116



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 76/153 (49%), Gaps = 6/153 (3%)

Query: 323 TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFG 382
           ++G G  GQ G     DE  P  +       I  +A G  H I ++S G V ++G    G
Sbjct: 22  SWGAGTEGQLGTKILQDEHFPQLLHQPSLSSISSLACGGAHVIALTSAGKVLSWGRGNSG 81

Query: 383 QLGTGGDQAETL-PRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
           QLG G   + +L P+ +   SL+      VS G  H+  ++D+G VF  G   +GQLG G
Sbjct: 82  QLGHGLVVSNSLYPKAV--TSLDGYFITHVSAGWGHSGFVSDNGCVFTCGDGSFGQLGHG 139

Query: 442 DVIDRNIPSQVT--IEGCVPRNVACGWWHTLLL 472
           D      P +V+  ++  V + VACG  H+L+L
Sbjct: 140 DHASHCSPVKVSCFVDQHVEQ-VACGMRHSLVL 171


>gi|350593460|ref|XP_003133446.3| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
            scrofa]
          Length = 4060

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 122/251 (48%), Gaps = 32/251 (12%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            ++   V +GG+H LALS  G+V+ WG   +G+LG G+R          PC       DR 
Sbjct: 3266 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR---------SPC-------DRP 3309

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
              +             + G  V  +A GG HSA +T AG L T+G G YG+ G   ++D+
Sbjct: 3310 RVIE-----------SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQ 3358

Query: 341  LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V +L G ++  VA  +G   T+C++ D  V+++G   +G+LG GG     +P  +
Sbjct: 3359 LKPKLVDALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKI 3418

Query: 399  DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGC 457
            D  SL  +    V CG++ +  +   G V+ WG   Y +LG G       P QV  ++G 
Sbjct: 3419 D--SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGK 3476

Query: 458  VPRNVACGWWH 468
                +A G  H
Sbjct: 3477 KVIAIATGSLH 3487



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 128/303 (42%), Gaps = 80/303 (26%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GGRH  AL+  G+V+ WG G +G+LG  SR+     P  I  +++   +D  
Sbjct: 2272 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRD-- 2328

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                    IACG  HSA +T +G L T+G G YG+ G G    +
Sbjct: 2329 ------------------------IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ 2364

Query: 341  LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V  LLG ++  VA G     T+ ++ +G V+++G   FG+LG GG +   +P+ +
Sbjct: 2365 LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNI 2424

Query: 399  DAPSLE------------------------------------NVHSKS------------ 410
            +  + +                                    +VH +             
Sbjct: 2425 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI 2484

Query: 411  --VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWW 467
              V+ GA H   + D G+V+ WG N +GQ G G       P+ V  +EG     VACG  
Sbjct: 2485 VHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 2544

Query: 468  HTL 470
            H++
Sbjct: 2545 HSV 2547



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 142/365 (38%), Gaps = 83/365 (22%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V   +G  HC+A++  GEVY+WG  E         D   G G ++   +R    + E + 
Sbjct: 3269 VAVNSGGKHCLALSSEGEVYSWGEAE---------DGKLGHG-NRSPCDRPR--VIESLR 3316

Query: 161  PRSQVSRSSGGTSSG-TDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
                V  ++GG  S      G      K R   L    +E            P LV    
Sbjct: 3317 GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLK--------PKLVDALQ 3368

Query: 220  GVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
            G R+  VA  +G   TL L+D   VW WG G  G+LG G                   G 
Sbjct: 3369 GHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-------------------GS 3409

Query: 278  DRSAALSRGSVNSEGPGFRVPGNY-------VKGIACGGRHSAVITDAGALLTFGWGLYG 330
            D               G +VP          V  + CG + S  +T +GA+ T+G G Y 
Sbjct: 3410 D---------------GCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 3454

Query: 331  QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            + G GS D    P  V  L G ++  +A G  H +C + DG  Y +G N  GQLG G   
Sbjct: 3455 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGS-YTWGDNDEGQLGDGTTN 3513

Query: 391  AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
            A   PRL+ A  L+      V+CG+ HT           W  +K    G        +P+
Sbjct: 3514 AIQRPRLVAA--LQGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPA 3555

Query: 451  QVTIE 455
            QV +E
Sbjct: 3556 QVPME 3560



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 109/388 (28%), Positives = 162/388 (41%), Gaps = 60/388 (15%)

Query: 65   KLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGW 124
            K+  WG  +D  Q     G   ++P      +  ++V+ A G     AVT  G+VY  G 
Sbjct: 2185 KVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 2243

Query: 125  KECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG---TSSGTDGR-- 179
                 +GR+   +S+GT        RQ + L+  V  +  V+  SGG   T+   DG+  
Sbjct: 2244 ---ATNGRLGLGISSGTV----PIPRQITALSSYVVKK--VAVHSGGRHATALTVDGKVF 2294

Query: 180  --GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS 237
              G G++G         K    S  + D+     P L+      RI  +A G  H+ AL+
Sbjct: 2295 SWGEGDDG---------KLGHFSRMNCDK-----PRLIEALKTKRIRDIACGSSHSAALT 2340

Query: 238  DIGQVWGWGYGGEGQLGLGS-----RIRMVSSPHPIPCIESSYGKDRSAALS---RGSVN 289
              G+++ WG G  G+LG G      + +MV        I+ + G   +  L+    G V 
Sbjct: 2341 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 2400

Query: 290  SEGPG-------------------FRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
            S G G                    R+ G  V  I CG + S  +T +G + T+G G Y 
Sbjct: 2401 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 2460

Query: 331  QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            + G GS      P  V  L G +I  VA G  H + ++  G VYA+G N  GQ G G   
Sbjct: 2461 RLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTT 2520

Query: 391  AETLPRLLDAPSLENVHSKSVSCGARHT 418
                P L+    LE      V+CG+ H+
Sbjct: 2521 VNRKPTLVQG--LEGQKITRVACGSSHS 2546



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 127/278 (45%), Gaps = 54/278 (19%)

Query: 225  TVAAGGRHTLALSDIGQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAA 282
            T++AGG         G ++GWG+   GQLG   G+++++     P PC   +    R   
Sbjct: 3172 TLSAGGS--------GTIYGWGHNHRGQLGGIEGAKVKV-----PTPC--EALAALRPVQ 3216

Query: 283  LSRG-----SVNSEGPGF-------------------------RVPGNYVKGIAC--GGR 310
            L  G     +V ++G  +                          +   ++K +A   GG+
Sbjct: 3217 LIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGK 3276

Query: 311  HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
            H   ++  G + ++G    G+ G G+      P  + SL GI++  VAAG  H+ C+++ 
Sbjct: 3277 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAA 3336

Query: 371  GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGA--RHTAVIADDGKVF 428
            GD+Y +G  ++G+LG    + +  P+L+DA  L+      V+CG+    T  + DD  V+
Sbjct: 3337 GDLYTWGKGRYGRLGHSDSEDQLKPKLVDA--LQGHRVVDVACGSGDAQTLCLTDDDTVW 3394

Query: 429  CWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
             WG   YG+LG G      +P ++ ++ G     V CG
Sbjct: 3395 SWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECG 3432



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 83/310 (26%), Positives = 121/310 (39%), Gaps = 47/310 (15%)

Query: 57   AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEG 116
            A A++   K+ +WG  DD G+    S  + + P          I   A G +H  A+T  
Sbjct: 2284 ATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 2342

Query: 117  GEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGT 176
            GE+YTWG  E    GR  G     T L   + +        QV+  S+ +++   T  G 
Sbjct: 2343 GELYTWGLGE---YGR-LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 2398

Query: 177  DGR-GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLA 235
                G G+ G   R              G E  +    +  LN G  +  +  G + +LA
Sbjct: 2399 VFSWGDGDFGKLGR-------------GGSEGCNIPQNIERLN-GQGVCQIECGAQFSLA 2444

Query: 236  LSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF 295
            L+  G VW WG G   +LG GS +  V  P  +                         G 
Sbjct: 2445 LTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQVVE------------------------GL 2479

Query: 296  RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
            R  G  +  +A G  H   +TDAG +  +G   +GQ G G+T     P  V  L G +I 
Sbjct: 2480 R--GKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKIT 2537

Query: 356  GVAAGLWHTI 365
             VA G  H++
Sbjct: 2538 RVACGSSHSV 2547



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 6/168 (3%)

Query: 302  VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVA-- 358
            V  +A G +    +T  G +   G    G+ G G +   +  P  +++L    ++ VA  
Sbjct: 2219 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 2278

Query: 359  AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
            +G  H   ++ DG V+++G    G+LG         PRL++A  L+    + ++CG+ H+
Sbjct: 2279 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA--LKTKRIRDIACGSSHS 2336

Query: 419  AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACG 465
            A +   G+++ WG  +YG+LG GD   +  P  V +  G     VACG
Sbjct: 2337 AALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 2384



 Score = 39.7 bits (91), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 72/149 (48%), Gaps = 3/149 (2%)

Query: 324  FGWGL--YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
            +GWG    GQ G         P    +L  ++   +  G      +++DG +YA G    
Sbjct: 3182 YGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGYGAG 3241

Query: 382  GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
            G+LG GG ++ + P LL++     +   +V+ G +H   ++ +G+V+ WG  + G+LG G
Sbjct: 3242 GRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG 3301

Query: 442  DVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            +    + P  + ++ G    +VA G  H+
Sbjct: 3302 NRSPCDRPRVIESLRGIEVVDVAAGGAHS 3330


>gi|428164909|gb|EKX33919.1| hypothetical protein GUITHDRAFT_166344 [Guillardia theta CCMP2712]
          Length = 784

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 89/281 (31%), Positives = 128/281 (45%), Gaps = 33/281 (11%)

Query: 193 LAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQ 252
           L KQ   +   G +   + P L+     +    +AAG  H +AL+D+G+VW WG   EGQ
Sbjct: 190 LTKQEMLARPDG-KYFRSVPMLINSIQDLHFLELAAGDFHVIALNDLGEVWSWGNNVEGQ 248

Query: 253 LGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHS 312
           LG+G  +   S P  +                   V  +G       N VK +A G  HS
Sbjct: 249 LGVGD-LSQRSQPAKV-------------------VYMDGL------NTVK-VAAGSYHS 281

Query: 313 AVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGD 372
            V+TD G + + G    GQ G G      +P  +  L    I  +A G + +  IS  G+
Sbjct: 282 LVLTDFGQVYSMGLNANGQLGLGDYSSRKAPTLIKYLATKNISSIACGDYASYAISDAGE 341

Query: 373 VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLEN--VHSKSVSCGARHTAVIADDGKVFCW 430
           V+A+G N FGQLG         P L+  PSL+N   +   V  G R    I + G V+ +
Sbjct: 342 VFAWGDNSFGQLGQSAAVTYNEPSLI--PSLKNDGANVYKVFGGQRTIFAIDESGIVYAF 399

Query: 431 GWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTL 470
           G N YG LGLGD   R  P+++ +  G     +A G +HT+
Sbjct: 400 GNNDYGMLGLGDKTTRKFPTKISSFVGANVYVIASGAYHTI 440



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/269 (23%), Positives = 104/269 (38%), Gaps = 44/269 (16%)

Query: 97  EASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLT 156
           +   ++ AAG  H +A+ + GEV++WG    V      GDLS  +   K V+    + + 
Sbjct: 216 DLHFLELAAGDFHVIALNDLGEVWSWGNN--VEGQLGVGDLSQRSQPAKVVYMDGLNTVK 273

Query: 157 EQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVT 216
                   +  +  G         +G+ G                  GD +    P L+ 
Sbjct: 274 VAAGSYHSLVLTDFGQVYSMGLNANGQLG-----------------LGDYSSRKAPTLIK 316

Query: 217 LNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYG 276
                 I+++A G   + A+SD G+V+ WG    GQLG  + +   + P  IP ++    
Sbjct: 317 YLATKNISSIACGDYASYAISDAGEVFAWGDNSFGQLGQSAAV-TYNEPSLIPSLK---- 371

Query: 277 KDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGS 336
                       N     ++V G        G R    I ++G +  FG   YG  G G 
Sbjct: 372 ------------NDGANVYKVFG--------GQRTIFAIDESGIVYAFGNNDYGMLGLGD 411

Query: 337 TDDELSPNCVSSLLGIQIEGVAAGLWHTI 365
                 P  +SS +G  +  +A+G +HTI
Sbjct: 412 KTTRKFPTKISSFVGANVYVIASGAYHTI 440



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 52/86 (60%), Gaps = 3/86 (3%)

Query: 388 GDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
           G    ++P L++  S++++H   ++ G  H   + D G+V+ WG N  GQLG+GD+  R+
Sbjct: 201 GKYFRSVPMLIN--SIQDLHFLELAAGDFHVIALNDLGEVWSWGNNVEGQLGVGDLSQRS 258

Query: 448 IPSQVT-IEGCVPRNVACGWWHTLLL 472
            P++V  ++G     VA G +H+L+L
Sbjct: 259 QPAKVVYMDGLNTVKVAAGSYHSLVL 284



 Score = 44.7 bits (104), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 5/99 (5%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD--- 423
           + +  DVY  G N +GQLG G     T   L+D+  L    +  ++ G  H+  + D   
Sbjct: 23  VVAANDVYVVGYNDWGQLGLGDYLERTTETLIDS-KLPLDRTYGLAAGLYHSVALGDTSS 81

Query: 424 -DGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRN 461
             G V+ WG N  GQLGLG +     P  V  + C   N
Sbjct: 82  TQGLVYTWGRNSKGQLGLGPIWTSLSPQAVQWKACPEPN 120


>gi|330837692|ref|YP_004412333.1| chromosome condensation regulator RCC1 [Sphaerochaeta coccoides DSM
           17374]
 gi|329749595|gb|AEC02951.1| regulator of chromosome condensation RCC1 [Sphaerochaeta coccoides
           DSM 17374]
          Length = 707

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 83/251 (33%), Positives = 121/251 (48%), Gaps = 32/251 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +A V AG  HTL L   G +W  GY G GQLG G+ I        IP             
Sbjct: 395 VAAVFAGETHTLILKKDGTLWATGYNGVGQLGDGTII-----DKTIPV------------ 437

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                V  +  GF      VK ++ G  H+ ++   G L   G+   GQ G G+ D++ +
Sbjct: 438 ----QVKDDAGGFMTG---VKAVSAGAAHTMILKKDGTLWATGFNSNGQLGIGNNDNKDT 490

Query: 343 PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPS 402
           P  V+S+    +  V+ G  HT+ +  +G ++A G N  GQLG G +     P  +    
Sbjct: 491 PVQVASM-DSDVAAVSTGELHTMILKKNGTLWATGYNASGQLGDGYNTERNTPEQV---- 545

Query: 403 LENVHSKSVSCGARHTAVIAD-DGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRN 461
           +ENV   +V  G  HT ++ + DG ++  G N YGQLG+GD   R+ P+QVT  G     
Sbjct: 546 MENV--AAVFAGVGHTMILKEEDGTLWATGSNGYGQLGVGDNDGRSTPAQVTSMGSDVAV 603

Query: 462 VACGWWHTLLL 472
           V+ GW HT++L
Sbjct: 604 VSGGWGHTIIL 614



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 59/177 (33%), Positives = 90/177 (50%), Gaps = 6/177 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCV-----SSLLGIQIEG 356
           VK ++ GG H+ ++   G L   G   YGQ G G T +  +P  V      S+    +  
Sbjct: 338 VKSVSAGGYHTMILKTDGTLWATGNNEYGQLGVGDTTNRSTPEQVWDSPDGSVKMTDVAA 397

Query: 357 VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLP-RLLDAPSLENVHSKSVSCGA 415
           V AG  HT+ +  DG ++A G N  GQLG G    +T+P ++ D         K+VS GA
Sbjct: 398 VFAGETHTLILKKDGTLWATGYNGVGQLGDGTIIDKTIPVQVKDDAGGFMTGVKAVSAGA 457

Query: 416 RHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
            HT ++  DG ++  G+N  GQLG+G+  +++ P QV         V+ G  HT++L
Sbjct: 458 AHTMILKKDGTLWATGFNSNGQLGIGNNDNKDTPVQVASMDSDVAAVSTGELHTMIL 514



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 112/250 (44%), Gaps = 37/250 (14%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  V+AG  HT+ L   G +W  G+   GQLG+G+      +P  +  ++S       AA
Sbjct: 450 VKAVSAGAAHTMILKKDGTLWATGFNSNGQLGIGNNDNK-DTPVQVASMDSDV-----AA 503

Query: 283 LSRGSVNSE-------------------GPGFRVPGNY-------VKGIACGGRHSAVIT 316
           +S G +++                    G G+    N        V  +  G  H+ ++ 
Sbjct: 504 VSTGELHTMILKKNGTLWATGYNASGQLGDGYNTERNTPEQVMENVAAVFAGVGHTMILK 563

Query: 317 DA-GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYA 375
           +  G L   G   YGQ G G  D   +P  V+S+ G  +  V+ G  HTI +  DG ++A
Sbjct: 564 EEDGTLWATGSNGYGQLGVGDNDGRSTPAQVTSM-GSDVAVVSGGWGHTIILKEDGLLWA 622

Query: 376 FGGNQFGQLGTGGDQAETLPRLLDA-PSLENVHSK--SVSCGARHTAVIADDGKVFCWGW 432
            G N  G+LG G       P  + A  +L +  +   +VS G  HT ++  DG ++  G 
Sbjct: 623 TGYNGSGELGDGTMINSKTPVQVKASTTLGDFMTDVVAVSAGMNHTIILKKDGTLWATGH 682

Query: 433 NKYGQLGLGD 442
           N +GQLGLGD
Sbjct: 683 NGFGQLGLGD 692



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 75/128 (58%), Gaps = 7/128 (5%)

Query: 352 IQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLP-RLLDAP--SLENVHS 408
           ++++ V+AG +HT+ + +DG ++A G N++GQLG G     + P ++ D+P  S++    
Sbjct: 336 VRVKSVSAGGYHTMILKTDGTLWATGNNEYGQLGVGDTTNRSTPEQVWDSPDGSVKMTDV 395

Query: 409 KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEG----CVPRNVAC 464
            +V  G  HT ++  DG ++  G+N  GQLG G +ID+ IP QV  +        + V+ 
Sbjct: 396 AAVFAGETHTLILKKDGTLWATGYNGVGQLGDGTIIDKTIPVQVKDDAGGFMTGVKAVSA 455

Query: 465 GWWHTLLL 472
           G  HT++L
Sbjct: 456 GAAHTMIL 463



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 49/81 (60%), Gaps = 7/81 (8%)

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIE 455
           ++AP+++ V  KSVS G  HT ++  DG ++  G N+YGQLG+GD  +R+ P QV  + +
Sbjct: 329 INAPAVK-VRVKSVSAGGYHTMILKTDGTLWATGNNEYGQLGVGDTTNRSTPEQVWDSPD 387

Query: 456 GCVPRN----VACGWWHTLLL 472
           G V       V  G  HTL+L
Sbjct: 388 GSVKMTDVAAVFAGETHTLIL 408



 Score = 43.5 bits (101), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 62/142 (43%), Gaps = 25/142 (17%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
           GD +  + P  VT + G  +A V+ G  HT+ L + G +W  GY G G+LG G+   M++
Sbjct: 583 GDNDGRSTPAQVT-SMGSDVAVVSGGWGHTIILKEDGLLWATGYNGSGELGDGT---MIN 638

Query: 264 SPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLT 323
           S  P+            A+ + G   ++          V  ++ G  H+ ++   G L  
Sbjct: 639 SKTPVQV---------KASTTLGDFMTD----------VVAVSAGMNHTIILKKDGTLWA 679

Query: 324 FGWGLYGQCGQGSTDDELSPNC 345
            G   +GQ G G  D  L  N 
Sbjct: 680 TGHNGFGQLGLG--DSSLGTNI 699


>gi|159037172|ref|YP_001536425.1| chromosome condensation regulator RCC1 [Salinispora arenicola
           CNS-205]
 gi|157916007|gb|ABV97434.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
           CNS-205]
          Length = 560

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 114/399 (28%), Positives = 159/399 (39%), Gaps = 62/399 (15%)

Query: 87  EIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKD 146
            +P    LP   ++   AAG AH +AVT  G +  WG           G L  GT  ++ 
Sbjct: 78  SMPVAVSLPAGVTVTTVAAGAAHNLAVTSAGTILAWGDNSS-------GQLGDGTTSNRH 130

Query: 147 V-----FERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESS 201
                      +           ++ +S GT         G+ G                
Sbjct: 131 TPVAVGLPTGVTVTAVAAGAAHSLALTSAGTVLAWGANTIGQLGD--------------- 175

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
             G    S  P  V L PGV    VAAG  H+LA++  G V  WG    GQLG G+ I  
Sbjct: 176 --GTTIDSPAPVDVNLPPGVTATAVAAGAAHSLAVTSAGTVLAWGDNASGQLGEGTTI-- 231

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVP-GNYVKGIACGGRHSAVITDAGA 320
              P   P + S                       +P G     +A G  HS  +T AGA
Sbjct: 232 ---PSRTPVVVS-----------------------LPSGVTATAVAGGDLHSLAVTSAGA 265

Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
           +L +G    GQ G G+T D  +P  VS   G  +  VAAG+  ++ +SS G V A+G N 
Sbjct: 266 VLAWGSNSSGQLGDGTTADRSTPVAVSLSGGTTVTAVAAGIAFSLALSSAGAVLAWGSNS 325

Query: 381 FGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL 440
            GQLG G     + P  + +P+   V   +++ G  H   +   G    WG N +GQLG 
Sbjct: 326 SGQLGDGTTADRSTPVTVSSPAGTTV--TAIAGGDAHGLAVTSVGAAIAWGNNSFGQLGD 383

Query: 441 GDVIDRNIPSQVTIE--GCVPRNVACGWWHTLLLAVPPT 477
           G   DR  P  V++         +A G  H++ +A PPT
Sbjct: 384 GTNTDRVTPVAVSLPVGTTTLTAIAAGAAHSVAVAAPPT 422



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 88/267 (32%), Positives = 124/267 (46%), Gaps = 32/267 (11%)

Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
           S+ P  V+L  GV + TVAAG  H LA++  G +  WG    GQLG G+           
Sbjct: 77  SSMPVAVSLPAGVTVTTVAAGAAHNLAVTSAGTILAWGDNSSGQLGDGTT---------- 126

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFRVP-GNYVKGIACGGRHSAVITDAGALLTFGWG 327
                    +R   ++ G          +P G  V  +A G  HS  +T AG +L +G  
Sbjct: 127 --------SNRHTPVAVG----------LPTGVTVTAVAAGAAHSLALTSAGTVLAWGAN 168

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG 387
             GQ G G+T D  +P  V+   G+    VAAG  H++ ++S G V A+G N  GQLG G
Sbjct: 169 TIGQLGDGTTIDSPAPVDVNLPPGVTATAVAAGAAHSLAVTSAGTVLAWGDNASGQLGEG 228

Query: 388 GDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
                  P ++  PS   V + +V+ G  H+  +   G V  WG N  GQLG G   DR+
Sbjct: 229 TTIPSRTPVVVSLPS--GVTATAVAGGDLHSLAVTSAGAVLAWGSNSSGQLGDGTTADRS 286

Query: 448 IPSQVTIE-GCVPRNVACGWWHTLLLA 473
            P  V++  G     VA G   +L L+
Sbjct: 287 TPVAVSLSGGTTVTAVAAGIAFSLALS 313



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 111/397 (27%), Positives = 160/397 (40%), Gaps = 65/397 (16%)

Query: 33  PLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWG--STDDLGQSYVTSGKHGEIPE 90
           P+ V LP  V          G    +A++ +  ++ WG  S+  LG    TS +H   P 
Sbjct: 80  PVAVSLPAGV---TVTTVAAGAAHNLAVTSAGTILAWGDNSSGQLGDGT-TSNRH--TPV 133

Query: 91  PFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDK----D 146
              LPT  ++   AAG AH +A+T  G V  WG           G L  GT +D     D
Sbjct: 134 AVGLPTGVTVTAVAAGAAHSLALTSAGTVLAWG-------ANTIGQLGDGTTIDSPAPVD 186

Query: 147 V-FERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGD 205
           V      +           ++ +S GT        SG+ G                  G 
Sbjct: 187 VNLPPGVTATAVAAGAAHSLAVTSAGTVLAWGDNASGQLG-----------------EGT 229

Query: 206 ENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSP 265
              S  P +V+L  GV    VA G  H+LA++  G V  WG    GQLG G+        
Sbjct: 230 TIPSRTPVVVSLPSGVTATAVAGGDLHSLAVTSAGAVLAWGSNSSGQLGDGTT------- 282

Query: 266 HPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFG 325
                       DRS  +   +V+  G      G  V  +A G   S  ++ AGA+L +G
Sbjct: 283 -----------ADRSTPV---AVSLSG------GTTVTAVAAGIAFSLALSSAGAVLAWG 322

Query: 326 WGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLG 385
               GQ G G+T D  +P  VSS  G  +  +A G  H + ++S G   A+G N FGQLG
Sbjct: 323 SNSSGQLGDGTTADRSTPVTVSSPAGTTVTAIAGGDAHGLAVTSVGAAIAWGNNSFGQLG 382

Query: 386 TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIA 422
            G +     P  +  P +      +++ GA H+  +A
Sbjct: 383 DGTNTDRVTPVAVSLP-VGTTTLTAIAAGAAHSVAVA 418



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/143 (36%), Positives = 67/143 (46%), Gaps = 4/143 (2%)

Query: 312 SAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDG 371
           SAV  D    L +G    GQ G GST D   P  VS   G+ +  VAAG  H + ++S G
Sbjct: 51  SAVAADTA--LAWGDNASGQLGDGSTADSSMPVAVSLPAGVTVTTVAAGAAHNLAVTSAG 108

Query: 372 DVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWG 431
            + A+G N  GQLG G       P  +  P+       +V+ GA H+  +   G V  WG
Sbjct: 109 TILAWGDNSSGQLGDGTTSNRHTPVAVGLPTGVT--VTAVAAGAAHSLALTSAGTVLAWG 166

Query: 432 WNKYGQLGLGDVIDRNIPSQVTI 454
            N  GQLG G  ID   P  V +
Sbjct: 167 ANTIGQLGDGTTIDSPAPVDVNL 189


>gi|427780149|gb|JAA55526.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
           ubiquitin ligase [Rhipicephalus pulchellus]
          Length = 1175

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 121/251 (48%), Gaps = 35/251 (13%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  VA G +HTL L   G V+  G    GQLG    +R +               ++ AA
Sbjct: 87  VREVACGHKHTLVLLANGSVYSCGANDFGQLGQDRSMRKL---------------EQVAA 131

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDD-EL 341
           LS               + ++ +ACG  HS  ++DAG + ++G    GQ G G+ ++  L
Sbjct: 132 LS--------------AHEIRAVACGEAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRL 177

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQA--ETLPRLLD 399
            P  +  L  + I  +A G  H + ++++G+++++GGN  GQLG G D    E LPR + 
Sbjct: 178 RPKVIKKLATLHIVQIACGAVHCLALANNGELFSWGGNASGQLGLGRDSTGNERLPRRVS 237

Query: 400 APSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCV 458
              L  V    V+CGA H+  +   G VF WG N  GQLGL D  DR  P+ +  +    
Sbjct: 238 --HLVGVPLALVACGAMHSVGLTPSGTVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQR 295

Query: 459 PRNVACGWWHT 469
            ++V CG  HT
Sbjct: 296 IKHVCCGENHT 306



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 83/264 (31%), Positives = 117/264 (44%), Gaps = 33/264 (12%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLG----SRIR--MVSSPHPIPCIESSY 275
            I  VA G  H+LALSD GQV+ WG    GQLG G    SR+R  ++     +  ++ + 
Sbjct: 136 EIRAVACGEAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIAC 195

Query: 276 GKDRSAALS-------------------RGSVNSEGPGFRVP---GNYVKGIACGGRHSA 313
           G     AL+                   R S  +E    RV    G  +  +ACG  HS 
Sbjct: 196 GAVHCLALANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSV 255

Query: 314 VITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDV 373
            +T +G +  +G    GQ G     D L P  +  L   +I+ V  G  HT  +++DG V
Sbjct: 256 GLTPSGTVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGV 315

Query: 374 YAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIA-DDGKVFCWGW 432
           + FG   +GQLG G    E +PR      L       +SCG  HT   A   G+++ +G 
Sbjct: 316 FTFGAGTYGQLGHGVKVNEAVPR--RVVELMGTAISQLSCGRCHTVAYAPQSGRLYIFGL 373

Query: 433 NKYGQLGLGDVIDRNIPSQVTIEG 456
              GQLG G +    +P  VT+ G
Sbjct: 374 GMSGQLGNGTLESSALP--VTVPG 395



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/239 (30%), Positives = 119/239 (49%), Gaps = 40/239 (16%)

Query: 242 VWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPG------F 295
           ++ WG G  G+LGL                  + GKD         V++E P        
Sbjct: 47  LYSWGLGPNGELGL------------------TQGKD--------GVDTETPVSQPERVR 80

Query: 296 RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
           R     V+ +ACG +H+ V+   G++ + G   +GQ GQ  +  +L    V++L   +I 
Sbjct: 81  RFGTRAVREVACGHKHTLVLLANGSVYSCGANDFGQLGQDRSMRKLEQ--VAALSAHEIR 138

Query: 356 GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL-PRLLDAPSLENVHSKSVSCG 414
            VA G  H++ +S  G V+++G N+ GQLG G ++   L P+++    L  +H   ++CG
Sbjct: 139 AVACGEAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRPKVIK--KLATLHIVQIACG 196

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLG--DVIDRNIPSQVTIEGCVPRN-VACGWWHTL 470
           A H   +A++G++F WG N  GQLGLG     +  +P +V+    VP   VACG  H++
Sbjct: 197 AVHCLALANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSV 255



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 131/299 (43%), Gaps = 48/299 (16%)

Query: 100 IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQV 159
           I   A G AH +A+++ G+V++WG   C  +G++       + L   V ++ ++    Q+
Sbjct: 137 IRAVACGEAHSLALSDAGQVFSWG---CNRNGQLGCGTEEESRLRPKVIKKLATLHIVQI 193

Query: 160 S--PRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTL 217
           +      ++ ++ G      G  SG+ G  R             S+G+E L   P  V+ 
Sbjct: 194 ACGAVHCLALANNGELFSWGGNASGQLGLGR------------DSTGNERL---PRRVSH 238

Query: 218 NPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
             GV +A VA G  H++ L+  G V+ WG    GQLGL  +                  +
Sbjct: 239 LVGVPLALVACGAMHSVGLTPSGTVFVWGRNSCGQLGLSDQ------------------R 280

Query: 278 DRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST 337
           DR        + S+          +K + CG  H+A +T  G + TFG G YGQ G G  
Sbjct: 281 DRLHPTVLKPLRSQR---------IKHVCCGENHTAALTADGGVFTFGAGTYGQLGHGVK 331

Query: 338 DDELSPNCVSSLLGIQIEGVAAGLWHTICIS-SDGDVYAFGGNQFGQLGTGGDQAETLP 395
            +E  P  V  L+G  I  ++ G  HT+  +   G +Y FG    GQLG G  ++  LP
Sbjct: 332 VNEAVPRRVVELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLGMSGQLGNGTLESSALP 390



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 6/122 (4%)

Query: 354 IEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSC 413
           +  VA G  HT+ + ++G VY+ G N FGQLG    Q  ++ +L    +L     ++V+C
Sbjct: 87  VREVACGHKHTLVLLANGSVYSCGANDFGQLG----QDRSMRKLEQVAALSAHEIRAVAC 142

Query: 414 GARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPR--NVACGWWHTLL 471
           G  H+  ++D G+VF WG N+ GQLG G   +  +  +V  +        +ACG  H L 
Sbjct: 143 GEAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLA 202

Query: 472 LA 473
           LA
Sbjct: 203 LA 204


>gi|444730943|gb|ELW71312.1| putative E3 ubiquitin-protein ligase HERC1 [Tupaia chinensis]
          Length = 4409

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 81/262 (30%), Positives = 126/262 (48%), Gaps = 18/262 (6%)

Query: 232  HTLALSDIGQVWGWGYGGEGQLGLGS-----RIRMVSSPHPIPCIESSYGKDRSAALS-- 284
            H++AL++ G+V+ WG G  G+LG G+     R R + +      ++ S G   SA ++  
Sbjct: 3631 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD 3690

Query: 285  -------RGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL-TFGWGLYGQCGQGS 336
                    G     G G        + +ACG  H+  ++  G+++  FG G YG+ G G+
Sbjct: 3691 GKLFTFGNGDYGRLGLGNTSNKKLPERVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN 3750

Query: 337  TDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPR 396
            +  + SP  V  L GI I+ VA G   ++ ++ DG VY FG ++   L  G  +    P+
Sbjct: 3751 STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQ 3810

Query: 397  LLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-E 455
                P L  V  + V+ GA HT  +A  G V+ WG N  GQLGLG       P+ VT+ +
Sbjct: 3811 --QVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQ 3868

Query: 456  GCVPRNVACGWWHTLLLAVPPT 477
            G   R ++ G  H+     PP 
Sbjct: 3869 GKNVRQISAGRCHSAAWTAPPV 3890



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 120/261 (45%), Gaps = 46/261 (17%)

Query: 242  VWGWGYGGEGQLGLGSRIRMVSSPHP------------------------IPCIESSYGK 277
            V+ WG G  GQL    R  MV +  P                        + C E SYG+
Sbjct: 3537 VYLWGAGRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGR 3596

Query: 278  ---DRSAALSRGSVNSEGPGFRVPGNYVKGIACGGR-HSAVITDAGALLTFGWGLYGQCG 333
                 S  L   +V S   GF V        +CG   HS  +T++G + ++G G YG+ G
Sbjct: 3597 LGQGNSDDLHVLTVISALQGFVVTQLVT---SCGSDGHSMALTESGEVFSWGDGDYGKLG 3653

Query: 334  QGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAET 393
             G++D +  P  + +L G ++  ++ G  H+  ++SDG ++ FG   +G+LG G    + 
Sbjct: 3654 HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKK 3713

Query: 394  LPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
            LP             + V+CG  HT AV AD   V+ +G   YG+LGLG+   ++ P +V
Sbjct: 3714 LP-------------ERVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKV 3760

Query: 453  TIE-GCVPRNVACGWWHTLLL 472
             +  G   + VACG   ++ L
Sbjct: 3761 DVLCGIGIKKVACGTQFSVAL 3781



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 109/393 (27%), Positives = 159/393 (40%), Gaps = 86/393 (21%)

Query: 41   TVGSAWRDVCGGGCGFAMAISD--------SRKLITWGSTDDLGQSYVTSGKHGEIPEPF 92
            +   A + +CG  C F +  +         S   +  G++DDL    V S   G +    
Sbjct: 3563 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVV--- 3619

Query: 93   PLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQS 152
                   +V +     H +A+TE GEV++WG  +       +G L  G   D+    RQ 
Sbjct: 3620 -----TQLVTSCGSDGHSMALTESGEVFSWGDGD-------YGKLGHGNS-DRQRRPRQI 3666

Query: 153  SFLT-EQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDEN 207
              L  E+V   S   + S   +S  DG+    G+G+ G    R+ L          G+ +
Sbjct: 3667 EALQGEEVVQMSCGFKHSAVVTS--DGKLFTFGNGDYG----RLGL----------GNTS 3710

Query: 208  LSAFPCLVTLNPGVRIATVAAGGRHTLALS-DIGQVWGWGYGGEGQLGLGSRIRMVSSPH 266
                P             VA G  HTLA+S D   VW +G G  G+LGLG+     SSP 
Sbjct: 3711 NKKLP-----------ERVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK-SSPQ 3758

Query: 267  PIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGW 326
             +  +                           G  +K +ACG + S  +T  G + TFG 
Sbjct: 3759 KVDVL--------------------------CGIGIKKVACGTQFSVALTKDGHVYTFGQ 3792

Query: 327  GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
                   +G   +   P  V  L G+ IE VA G  HT+ ++S GDVYA+G N  GQLG 
Sbjct: 3793 DRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL 3852

Query: 387  GGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            G       P L+     +NV  + +S G  H+A
Sbjct: 3853 GHTNHVREPTLVTVLQGKNV--RQISAGRCHSA 3883



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 95/174 (54%), Gaps = 5/174 (2%)

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
           + I  G   + VI+  G++   G G YG+ G G ++++ +   ++      I+ V++   
Sbjct: 404 QTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKG 463

Query: 363 ---HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
              HT+  +++G+V+++G   +G+LG G    +  P+L+  P L+      VS G RH+A
Sbjct: 464 SDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCVSAGYRHSA 522

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
            + +DG+++ WG   +G+LG GD   RNIP+ V     V   V+CG  HT+ L+
Sbjct: 523 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG-EVSCGSSHTIALS 575



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 132/298 (44%), Gaps = 35/298 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAG---GRHTLALSDIGQVWGWGYGGEGQLGLGSRI- 259
           GD N  +    +T  P   I  V++      HTLA +  G+V+ WG G  G+LG G+   
Sbjct: 436 GDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSST 495

Query: 260 ----RMVSSP---HPIPCIESSY---------------GKDRSAALSRGSVNSEG-PGFR 296
               +++  P     + C+ + Y               G+     L  G  NS   P   
Sbjct: 496 QKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 555

Query: 297 VPGNYVKGIACGGRHSAVITDAGALL-TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
              + V  ++CG  H+  ++  G  + +FG G  G+ G G T+    P  + +L G+ I 
Sbjct: 556 KDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIR 615

Query: 356 GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL-PRLLDAPSLENVHSKSVSCG 414
            V AG   ++ ++S G VYA+G      LG G  +A  L P+L++   L       +S G
Sbjct: 616 KVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE--ELAATRIVDISIG 671

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVI-DRNIPSQVT-IEGCVPRNVACGWWHTL 470
             H   ++ D +V+ WG N  GQ G G+       P +V+ ++G   + ++ G  H+L
Sbjct: 672 DSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSL 729



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 112/251 (44%), Gaps = 31/251 (12%)

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
           T+ AG   T  +S  G V   G G  G+LGLG       S +     + ++   RS    
Sbjct: 405 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLG------DSNNQSTLKKLTFEPHRSIKKV 458

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN 344
             S  S+G                  H+   T  G + ++G G YG+ G G++  +  P 
Sbjct: 459 SSSKGSDG------------------HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPK 500

Query: 345 CVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSL 403
            +   L G  +  V+AG  H+  ++ DG++Y +G   FG+LG G   +  +P L+    +
Sbjct: 501 LIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK--DI 558

Query: 404 ENVHSKSVSCGARHTAVIADDGK-VFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRN 461
            NV    VSCG+ HT  ++ DG+ V+ +G    G+LG GD      P  +  ++G   R 
Sbjct: 559 SNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK 616

Query: 462 VACGWWHTLLL 472
           V  G   +L L
Sbjct: 617 VCAGSQSSLAL 627



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 130/324 (40%), Gaps = 67/324 (20%)

Query: 52  GGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVK-AAAGWA 108
           G  G  +A +   ++ +WG  D   LG    ++ K+   P+    P +  +V   +AG+ 
Sbjct: 463 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY---PKLIQGPLQGKVVVCVSAGYR 519

Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRS 168
           H  AVTE GE+YTWG  +       FG L  G     D   R    L + +S   +VS  
Sbjct: 520 HSAAVTEDGELYTWGEGD-------FGRLGHG-----DSNSRNIPTLVKDISNVGEVSCG 567

Query: 169 SGGTSS-GTDGR-----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVR 222
           S  T +   DGR     G G+ G                  GD N    P ++    G+ 
Sbjct: 568 SSHTIALSKDGRTVWSFGGGDNGKL--------------GHGDTNRVYKPKVIEALQGMF 613

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V AG + +LAL+  GQV+ WG G    LG GS       P  I              
Sbjct: 614 IRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE------------- 658

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                         +    +  I+ G  H   ++    +  +G    GQCGQG++   ++
Sbjct: 659 -------------ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPIT 705

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTI 365
            P  VS L GI I+ ++AG  H++
Sbjct: 706 KPKKVSGLDGIAIQQISAGTSHSL 729



 Score = 45.4 bits (106), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 4/89 (4%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           +S   +VY +G N   QL  G  +    P+L  APS  +  ++++  G   T VI+ DG 
Sbjct: 366 VSETCEVYVWGSNSSHQLVEGTQEKILQPKL--APSFSD--AQTIEAGQYCTFVISTDGS 421

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
           V   G   YG+LGLGD  +++   ++T E
Sbjct: 422 VRACGKGSYGRLGLGDSNNQSTLKKLTFE 450


>gi|427794767|gb|JAA62835.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
           ubiquitin ligase, partial [Rhipicephalus pulchellus]
          Length = 1181

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 121/251 (48%), Gaps = 35/251 (13%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  VA G +HTL L   G V+  G    GQLG    +R +               ++ AA
Sbjct: 93  VREVACGHKHTLVLLANGSVYSCGANDFGQLGQDRSMRKL---------------EQVAA 137

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDD-EL 341
           LS               + ++ +ACG  HS  ++DAG + ++G    GQ G G+ ++  L
Sbjct: 138 LS--------------AHEIRAVACGEAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRL 183

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQA--ETLPRLLD 399
            P  +  L  + I  +A G  H + ++++G+++++GGN  GQLG G D    E LPR + 
Sbjct: 184 RPKVIKKLATLHIVQIACGAVHCLALANNGELFSWGGNASGQLGLGRDSTGNERLPRRVS 243

Query: 400 APSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCV 458
              L  V    V+CGA H+  +   G VF WG N  GQLGL D  DR  P+ +  +    
Sbjct: 244 --HLVGVPLALVACGAMHSVGLTPSGTVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQR 301

Query: 459 PRNVACGWWHT 469
            ++V CG  HT
Sbjct: 302 IKHVCCGENHT 312



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 83/264 (31%), Positives = 117/264 (44%), Gaps = 33/264 (12%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLG----SRIR--MVSSPHPIPCIESSY 275
            I  VA G  H+LALSD GQV+ WG    GQLG G    SR+R  ++     +  ++ + 
Sbjct: 142 EIRAVACGEAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIAC 201

Query: 276 GKDRSAALS-------------------RGSVNSEGPGFRVP---GNYVKGIACGGRHSA 313
           G     AL+                   R S  +E    RV    G  +  +ACG  HS 
Sbjct: 202 GAVHCLALANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSV 261

Query: 314 VITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDV 373
            +T +G +  +G    GQ G     D L P  +  L   +I+ V  G  HT  +++DG V
Sbjct: 262 GLTPSGTVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGV 321

Query: 374 YAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIA-DDGKVFCWGW 432
           + FG   +GQLG G    E +PR      L       +SCG  HT   A   G+++ +G 
Sbjct: 322 FTFGAGTYGQLGHGVKVNEAVPR--RVVELMGTAISQLSCGRCHTVAYAPQSGRLYIFGL 379

Query: 433 NKYGQLGLGDVIDRNIPSQVTIEG 456
              GQLG G +    +P  VT+ G
Sbjct: 380 GMSGQLGNGTLESSALP--VTVPG 401



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 131/299 (43%), Gaps = 48/299 (16%)

Query: 100 IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQV 159
           I   A G AH +A+++ G+V++WG   C  +G++       + L   V ++ ++    Q+
Sbjct: 143 IRAVACGEAHSLALSDAGQVFSWG---CNRNGQLGCGTEEESRLRPKVIKKLATLHIVQI 199

Query: 160 S--PRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTL 217
           +      ++ ++ G      G  SG+ G  R             S+G+E L   P  V+ 
Sbjct: 200 ACGAVHCLALANNGELFSWGGNASGQLGLGR------------DSTGNERL---PRRVSH 244

Query: 218 NPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
             GV +A VA G  H++ L+  G V+ WG    GQLGL  +                  +
Sbjct: 245 LVGVPLALVACGAMHSVGLTPSGTVFVWGRNSCGQLGLSDQ------------------R 286

Query: 278 DRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST 337
           DR        + S+          +K + CG  H+A +T  G + TFG G YGQ G G  
Sbjct: 287 DRLHPTVLKPLRSQR---------IKHVCCGENHTAALTADGGVFTFGAGTYGQLGHGVK 337

Query: 338 DDELSPNCVSSLLGIQIEGVAAGLWHTICIS-SDGDVYAFGGNQFGQLGTGGDQAETLP 395
            +E  P  V  L+G  I  ++ G  HT+  +   G +Y FG    GQLG G  ++  LP
Sbjct: 338 VNEAVPRRVVELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLGMSGQLGNGTLESSALP 396



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 6/122 (4%)

Query: 354 IEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSC 413
           +  VA G  HT+ + ++G VY+ G N FGQLG    Q  ++ +L    +L     ++V+C
Sbjct: 93  VREVACGHKHTLVLLANGSVYSCGANDFGQLG----QDRSMRKLEQVAALSAHEIRAVAC 148

Query: 414 GARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPR--NVACGWWHTLL 471
           G  H+  ++D G+VF WG N+ GQLG G   +  +  +V  +        +ACG  H L 
Sbjct: 149 GEAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLA 208

Query: 472 LA 473
           LA
Sbjct: 209 LA 210


>gi|301755558|ref|XP_002913646.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC6-like [Ailuropoda melanoleuca]
          Length = 1189

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 121/256 (47%), Gaps = 34/256 (13%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
            +R+  V+ G  H+LA+   G+V+ WG G EGQLG+G    +   P  I  +        
Sbjct: 74  NLRVDLVSCGKEHSLAVCYKGRVFAWGAGSEGQLGVGEFKEINLIPTKIKTLT------- 126

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-D 338
                              G  +  ++CG  HS  +++ G + ++G   +GQ G G    
Sbjct: 127 -------------------GIKIIQVSCGHYHSLALSEGGQVFSWGSNSHGQLGLGKECP 167

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL---P 395
            + SP  V SL GI +  VAAG  H+  +S  G  + +G N  GQL    +        P
Sbjct: 168 SQASPQRVRSLDGIPLTQVAAGGAHSFALSLSGASFGWGSNNAGQLALRQNNVPVQSHKP 227

Query: 396 RLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-I 454
           R + A  L+N+    +SCG  HTAV+   GKVF +G N YGQLG     ++  P  V  I
Sbjct: 228 RSIGA--LKNLGVIYISCGYEHTAVLTQTGKVFTFGGNSYGQLGHSPTAEKEGPQLVEGI 285

Query: 455 EGCVPRNVACGWWHTL 470
           +G V + + CG +HTL
Sbjct: 286 DGLVSQ-IDCGSYHTL 300



 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 63/202 (31%), Positives = 92/202 (45%), Gaps = 31/202 (15%)

Query: 206 ENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSP 265
           + ++  P  +    G++I  V+ G  H+LALS+ GQV+ WG    GQLGLG      +SP
Sbjct: 113 KEINLIPTKIKTLTGIKIIQVSCGHYHSLALSEGGQVFSWGSNSHGQLGLGKECPSQASP 172

Query: 266 HP------IPCIESSYGKDRSAALSR-------GSVNSEGPGFR---VPGNYVK------ 303
                   IP  + + G   S ALS        GS N+     R   VP    K      
Sbjct: 173 QRVRSLDGIPLTQVAAGGAHSFALSLSGASFGWGSNNAGQLALRQNNVPVQSHKPRSIGA 232

Query: 304 -------GIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG 356
                   I+CG  H+AV+T  G + TFG   YGQ G   T ++  P  V  + G+ +  
Sbjct: 233 LKNLGVIYISCGYEHTAVLTQTGKVFTFGGNSYGQLGHSPTAEKEGPQLVEGIDGL-VSQ 291

Query: 357 VAAGLWHTIC-ISSDGDVYAFG 377
           +  G +HT+  + + G V +FG
Sbjct: 292 IDCGSYHTLAYVYTTGKVVSFG 313



 Score = 40.0 bits (92), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 82/341 (24%), Positives = 131/341 (38%), Gaps = 78/341 (22%)

Query: 41  TVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKH-GEIPEPFPLPTEAS 99
           T+ +   D+   G   ++A+    ++  WG+  + GQ  V   K    IP      T   
Sbjct: 71  TLDNLRVDLVSCGKEHSLAVCYKGRVFAWGAGSE-GQLGVGEFKEINLIPTKIKTLTGIK 129

Query: 100 IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQV 159
           I++ + G  H +A++EGG+V++WG           G L    GL K+   + S      +
Sbjct: 130 IIQVSCGHYHSLALSEGGQVFSWG-------SNSHGQL----GLGKECPSQASPQRVRSL 178

Query: 160 S--PRSQVSRSSGGTSS-------GTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSA 210
              P +QV  ++GG  S        + G GS   G    +++L +      S    ++ A
Sbjct: 179 DGIPLTQV--AAGGAHSFALSLSGASFGWGSNNAG----QLALRQNNVPVQSHKPRSIGA 232

Query: 211 FPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPC 270
                  N GV    ++ G  HT  L+  G+V+ +G    GQLG         SP     
Sbjct: 233 LK-----NLGV--IYISCGYEHTAVLTQTGKVFTFGGNSYGQLG--------HSP----- 272

Query: 271 IESSYGKDRSAALSRGSVNSEGPGFRVPG--NYVKGIACGGRHS-AVITDAGALLTFGWG 327
                           +   EGP   V G    V  I CG  H+ A +   G +++FG G
Sbjct: 273 ----------------TAEKEGPQL-VEGIDGLVSQIDCGSYHTLAYVYTTGKVVSFGRG 315

Query: 328 LYGQCGQGSTD--------DELSPNCVSSLLGIQIEGVAAG 360
               C    T         D  SP   + L+  Q++ + AG
Sbjct: 316 --PSCKSSPTHPKALTENVDFTSPISANDLVDFQVKHIFAG 354


>gi|432863737|ref|XP_004070157.1| PREDICTED: E3 ISG15--protein ligase HERC5-like [Oryzias latipes]
          Length = 892

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/234 (31%), Positives = 113/234 (48%), Gaps = 32/234 (13%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           ++ VA G RHT+AL+  GQV+ WG    GQLGLG +   +SSP    C+ S         
Sbjct: 119 VSQVACGSRHTVALTKEGQVYTWGQNSRGQLGLGKKGCSISSPQ---CVRS--------- 166

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY--GQCGQGSTDDE 340
                         + G  +  ++ GG HS  ++ +G++  FGWG    GQ G G + D 
Sbjct: 167 --------------LSGMPLVQVSAGGDHSFALSVSGSV--FGWGRNDCGQLGLGDSQDR 210

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
            +P  V SL   +   ++ G  HT  ++  G V+ FG  QFGQLG    + E  PRL+  
Sbjct: 211 CTPTSVDSLNLKKTTSISCGKDHTAILTKHGTVFTFGSGQFGQLGHNSSRNELRPRLV-- 268

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI 454
             L       ++CG  HT V+ ++ K++ +G N   QLG  +    ++P  V +
Sbjct: 269 AELWGAKVTRIACGRYHTLVLQENNKIYSFGCNDQNQLGRSNDSHPSVPLPVLL 322



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/189 (32%), Positives = 96/189 (50%), Gaps = 28/189 (14%)

Query: 207 NLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPH 266
           ++S+  C+ +L+ G+ +  V+AGG H+ ALS  G V+GWG    GQLGLG          
Sbjct: 157 SISSPQCVRSLS-GMPLVQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGD--------- 206

Query: 267 PIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGW 326
                     +DR    S  S+N +             I+CG  H+A++T  G + TFG 
Sbjct: 207 ---------SQDRCTPTSVDSLNLKK---------TTSISCGKDHTAILTKHGTVFTFGS 248

Query: 327 GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
           G +GQ G  S+ +EL P  V+ L G ++  +A G +HT+ +  +  +Y+FG N   QLG 
Sbjct: 249 GQFGQLGHNSSRNELRPRLVAELWGAKVTRIACGRYHTLVLQENNKIYSFGCNDQNQLGR 308

Query: 387 GGDQAETLP 395
             D   ++P
Sbjct: 309 SNDSHPSVP 317



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 66/179 (36%), Positives = 96/179 (53%), Gaps = 7/179 (3%)

Query: 296 RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQI 354
           R+P   V  +ACG RH+  +T  G + T+G    GQ G G     +S P CV SL G+ +
Sbjct: 116 RIP---VSQVACGSRHTVALTKEGQVYTWGQNSRGQLGLGKKGCSISSPQCVRSLSGMPL 172

Query: 355 EGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
             V+AG  H+  +S  G V+ +G N  GQLG G  Q    P  +D+ +L+   + S+SCG
Sbjct: 173 VQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDSQDRCTPTSVDSLNLKK--TTSISCG 230

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
             HTA++   G VF +G  ++GQLG     +   P  V  + G     +ACG +HTL+L
Sbjct: 231 KDHTAILTKHGTVFTFGSGQFGQLGHNSSRNELRPRLVAELWGAKVTRIACGRYHTLVL 289



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/136 (33%), Positives = 67/136 (49%), Gaps = 10/136 (7%)

Query: 343 PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP- 401
           P  + +   I +  VA G  HT+ ++ +G VY +G N  GQLG G          + +P 
Sbjct: 108 PRMLEAFCRIPVSQVACGSRHTVALTKEGQVYTWGQNSRGQLGLGKKGCS-----ISSPQ 162

Query: 402 ---SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGC 457
              SL  +    VS G  H+  ++  G VF WG N  GQLGLGD  DR  P+ V ++   
Sbjct: 163 CVRSLSGMPLVQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDSQDRCTPTSVDSLNLK 222

Query: 458 VPRNVACGWWHTLLLA 473
              +++CG  HT +L 
Sbjct: 223 KTTSISCGKDHTAILT 238


>gi|432906474|ref|XP_004077549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Oryzias
           latipes]
          Length = 1059

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 95/295 (32%), Positives = 131/295 (44%), Gaps = 34/295 (11%)

Query: 205 DENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSS 264
           DE +   P       G R+  V  G RHT  L + G V+  G    GQLG     +    
Sbjct: 18  DEEIVVEPRKCEFFHGKRVRDVGCGRRHTAFLLEDGTVYTCGCNDLGQLG---HEKSRKK 74

Query: 265 PHPIPCIES------SYGKDRSAALS-RGSVNSEGPG-------------FRVPGNY--- 301
           P  +  +++      S G+  + AL+ +G V S G G              RVP N    
Sbjct: 75  PEQVVALDAQIIVALSCGESHTLALNDKGQVFSWGLGSDGQLGLNNFEECIRVPRNIKSL 134

Query: 302 ----VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEG 356
               V  +ACG  HS  ++  G + ++G   YGQ G G T   +S P  + SL GI    
Sbjct: 135 SDVQVAQVACGYWHSLALSKGGHIFSWGQNRYGQLGLGMTGQSISVPQHLQSLQGIPFAQ 194

Query: 357 VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR 416
           +AAG  H+  ++  G V+ +G N+FGQLG         P LL A  L +     +SCG  
Sbjct: 195 IAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDTNDRCFPALLKA--LRSQRVIYISCGED 252

Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTL 470
           HTA +  +G VF +G   YGQLG         P +V  + G V   +ACG  HTL
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGNVVTQIACGRQHTL 307



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 81/260 (31%), Positives = 121/260 (46%), Gaps = 34/260 (13%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI------ESSYG 276
           I  ++ G  HTLAL+D GQV+ WG G +GQLGL +    +  P  I  +      + + G
Sbjct: 86  IVALSCGESHTLALNDKGQVFSWGLGSDGQLGLNNFEECIRVPRNIKSLSDVQVAQVACG 145

Query: 277 KDRSAALSRGS--------------VNSEGPGFRVPGNY-------VKGIACGGRHSAVI 315
              S ALS+G               +   G    VP +           IA GG HS  +
Sbjct: 146 YWHSLALSKGGHIFSWGQNRYGQLGLGMTGQSISVPQHLQSLQGIPFAQIAAGGAHSFAL 205

Query: 316 TDAGALLTFGWGL--YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDV 373
           T +GA+  FGWG   +GQ G   T+D   P  + +L   ++  ++ G  HT  ++ +G V
Sbjct: 206 TLSGAV--FGWGRNKFGQLGLNDTNDRCFPALLKALRSQRVIYISCGEDHTAALTKEGGV 263

Query: 374 YAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGW 432
           + FG   +GQLG      E  PR +    + NV ++ ++CG +HT A     GK+  +G 
Sbjct: 264 FTFGAGGYGQLGHNSTNHEVNPRKV-FELMGNVVTQ-IACGRQHTLAFTPSSGKMDSFGL 321

Query: 433 NKYGQLGLGDVIDRNIPSQV 452
              GQLG     +R  P+ V
Sbjct: 322 GGNGQLGTRSTCNRKSPAPV 341



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 91/330 (27%), Positives = 133/330 (40%), Gaps = 77/330 (23%)

Query: 73  DDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG--------- 123
           +DLGQ  +   K  + PE         IV  + G +H +A+ + G+V++WG         
Sbjct: 61  NDLGQ--LGHEKSRKKPEQVVALDAQIIVALSCGESHTLALNDKGQVFSWGLGSDGQLGL 118

Query: 124 --WKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGS 181
             ++EC+   R    LS       DV                QV++ + G          
Sbjct: 119 NNFEECIRVPRNIKSLS-------DV----------------QVAQVACGYWHSLALSKG 155

Query: 182 GEEGS--KRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDI 239
           G   S  + R   L       S S  ++L +         G+  A +AAGG H+ AL+  
Sbjct: 156 GHIFSWGQNRYGQLGLGMTGQSISVPQHLQSLQ-------GIPFAQIAAGGAHSFALTLS 208

Query: 240 GQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPG 299
           G V+GWG    GQLGL       ++    P +  +    R                    
Sbjct: 209 GAVFGWGRNKFGQLGLND-----TNDRCFPALLKALRSQR-------------------- 243

Query: 300 NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAA 359
             V  I+CG  H+A +T  G + TFG G YGQ G  ST+ E++P  V  L+G  +  +A 
Sbjct: 244 --VIYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGNVVTQIAC 301

Query: 360 GLWHTICI---SSDGDVYAFGGNQFGQLGT 386
           G  HT+     S   D +  GGN  GQLGT
Sbjct: 302 GRQHTLAFTPSSGKMDSFGLGGN--GQLGT 329



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/160 (34%), Positives = 79/160 (49%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDEL--SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   YGQ G G  D+E+   P       G ++  V  G  HT  +  DG VY  G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVRDVGCGRRHTAFLLEDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   + +   ++SCG  HT  + D G+VF WG    GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQII--VALSCGESHTLALNDKGQVFSWGLGSDGQL 116

Query: 439 GLGDV-----IDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL +      + RNI S   ++      VACG+WH+L L+
Sbjct: 117 GLNNFEECIRVPRNIKSLSDVQVA---QVACGYWHSLALS 153



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 76/294 (25%), Positives = 121/294 (41%), Gaps = 50/294 (17%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHG-EIPEPFPLPTEASIVKAAAGWAHCV 111
           G    +A++D  ++ +WG   D GQ  + + +    +P      ++  + + A G+ H +
Sbjct: 92  GESHTLALNDKGQVFSWGLGSD-GQLGLNNFEECIRVPRNIKSLSDVQVAQVACGYWHSL 150

Query: 112 AVTEGGEVYTWGWKECVPSGRVFGDLSTG-TGLDKDVFERQSSFLTEQVSPRSQVSRSSG 170
           A+++GG +++WG          +G L  G TG    V +   S    Q  P +Q++  +G
Sbjct: 151 ALSKGGHIFSWGQNR-------YGQLGLGMTGQSISVPQHLQSL---QGIPFAQIA--AG 198

Query: 171 GTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGG 230
           G  S          G  R +              D N   FP L+      R+  ++ G 
Sbjct: 199 GAHSFALTLSGAVFGWGRNKFG-------QLGLNDTNDRCFPALLKALRSQRVIYISCGE 251

Query: 231 RHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNS 290
            HT AL+  G V+ +G GG GQLG  S    V +P  +                      
Sbjct: 252 DHTAALTKEGGVFTFGAGGYGQLGHNSTNHEV-NPRKV---------------------- 288

Query: 291 EGPGFRVPGNYVKGIACGGRHSAVIT-DAGALLTFGWGLYGQCGQGSTDDELSP 343
               F + GN V  IACG +H+   T  +G + +FG G  GQ G  ST +  SP
Sbjct: 289 ----FELMGNVVTQIACGRQHTLAFTPSSGKMDSFGLGGNGQLGTRSTCNRKSP 338


>gi|410048912|ref|XP_003952667.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Pan troglodytes]
          Length = 4776

 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 79/251 (31%), Positives = 122/251 (48%), Gaps = 32/251 (12%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            ++   V +GG+H LALS  G+V+ WG   +G+LG G+R          PC       DR 
Sbjct: 3981 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR---------SPC-------DRP 4024

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
              +             + G  V  +A GG HSA +T AG L T+G G YG+ G   ++D+
Sbjct: 4025 RVIE-----------SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQ 4073

Query: 341  LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V +L G ++  +A  +G   T+C++ D  V+++G   +G+LG GG     +P  +
Sbjct: 4074 LKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKI 4133

Query: 399  DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGC 457
            D  SL  +    V CG++ +  +   G V+ WG   Y +LG G       P QV  ++G 
Sbjct: 4134 D--SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGK 4191

Query: 458  VPRNVACGWWH 468
                +A G  H
Sbjct: 4192 KVIAIATGSLH 4202



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 129/255 (50%), Gaps = 29/255 (11%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           V+IA   + G H LAL+  G+V+ WG G  G+LG G  +     P   P + S++   ++
Sbjct: 496 VKIAA-HSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 549

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                             G +V  IACG  +SA IT  G L T+G G YG+ G GS++DE
Sbjct: 550 ------------------GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 591

Query: 341 LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
             P  V+ L G+++  VA  +G   T+ ++ +G V+++G   +G+LG GG      P+L+
Sbjct: 592 AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLI 651

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGC 457
           +   L+++    V CG++ +  +  DG+V+ WG     +LG G       P  +  ++G 
Sbjct: 652 E--KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGK 709

Query: 458 VPRNVACGWWHTLLL 472
              +VA G  H L L
Sbjct: 710 KVIDVAAGSTHCLAL 724



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 128/303 (42%), Gaps = 80/303 (26%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GGRH  AL+  G+V+ WG G +G+LG  SR+     P  I  +++   +D  
Sbjct: 3040 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRD-- 3096

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                    IACG  HSA +T +G L T+G G YG+ G G    +
Sbjct: 3097 ------------------------IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ 3132

Query: 341  LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V  LLG ++  VA G     T+ ++ +G V+++G   FG+LG GG +   +P+ +
Sbjct: 3133 LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNI 3192

Query: 399  DAPSLE------------------------------------NVHSKS------------ 410
            +  + +                                    +VH +             
Sbjct: 3193 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI 3252

Query: 411  --VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWW 467
              V+ GA H   + D G+V+ WG N +GQ G G       P+ V  +EG     VACG  
Sbjct: 3253 VHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3312

Query: 468  HTL 470
            H++
Sbjct: 3313 HSV 3315



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 76/263 (28%), Positives = 114/263 (43%), Gaps = 45/263 (17%)

Query: 220  GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG-------LGSRIRMVSSPHPIPCIE 272
            G+ +  VAAGG H+  ++  G ++ WG G  G+LG       L  ++      H +  I 
Sbjct: 4032 GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIA 4091

Query: 273  SSYGKDRSAALS------------RGSVNSEGP-GFRVPGNY-------VKGIACGGRHS 312
               G  ++  L+             G +   G  G +VP          V  + CG + S
Sbjct: 4092 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFS 4151

Query: 313  AVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGD 372
              +T +GA+ T+G G Y + G GS D    P  V  L G ++  +A G  H +C + DG+
Sbjct: 4152 VALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4211

Query: 373  VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGW 432
            VY +G N  GQLG G   A   PRL+ A  L+      V+CG+ HT           W  
Sbjct: 4212 VYTWGDNDEGQLGDGTTNAIQRPRLVAA--LQGKKVNRVACGSAHT---------LAWST 4260

Query: 433  NKYGQLGLGDVIDRNIPSQVTIE 455
            +K    G        +P+QV +E
Sbjct: 4261 SKPASAG-------KLPAQVPME 4276



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 165/400 (41%), Gaps = 60/400 (15%)

Query: 53   GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
              G   A +   K+  WG  +D  Q     G   ++P      +  ++V+ A G     A
Sbjct: 2941 AAGLESAATIRTKVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 2999

Query: 113  VTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG- 171
            VT  G+VY  G      +GR+   +S+GT        RQ + L+  V  +  V+  SGG 
Sbjct: 3000 VTVEGKVYACGE---ATNGRLGLGISSGTV----PIPRQITALSSYVVKK--VAVHSGGR 3050

Query: 172  --TSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIAT 225
              T+   DG+    G G++G         K    S  + D+     P L+      RI  
Sbjct: 3051 HATALTVDGKVFSWGEGDDG---------KLGHFSRMNCDK-----PRLIEALKTKRIRD 3096

Query: 226  VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS-----RIRMVSSPHPIPCIESSYGKDRS 280
            +A G  H+ AL+  G+++ WG G  G+LG G      + +MV        I+ + G   +
Sbjct: 3097 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3156

Query: 281  AALS---RGSVNSEGPG-------------------FRVPGNYVKGIACGGRHSAVITDA 318
              L+    G V S G G                    R+ G  V  I CG + S  +T +
Sbjct: 3157 QTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3216

Query: 319  GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            G + T+G G Y + G GS      P  V  L G +I  VA G  H + ++  G VYA+G 
Sbjct: 3217 GVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGD 3276

Query: 379  NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
            N  GQ G G       P L+    LE      V+CG+ H+
Sbjct: 3277 NDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHS 3314



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 86/168 (51%), Gaps = 3/168 (1%)

Query: 301  YVKGIAC--GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
            ++K +A   GG+H   ++  G + ++G    G+ G G+      P  + SL GI++  VA
Sbjct: 3980 FIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVA 4039

Query: 359  AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
            AG  H+ C+++ GD+Y +G  ++G+LG    + +  P+L++A     V   +   G   T
Sbjct: 4040 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQT 4099

Query: 419  AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
              + DD  V+ WG   YG+LG G      +P ++ ++ G     V CG
Sbjct: 4100 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECG 4147



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 92/217 (42%), Gaps = 38/217 (17%)

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
           SS DE   A P LV    G+++  VA  +G   TLA+++ GQVW WG G  G+LG G   
Sbjct: 587 SSEDE---AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG--- 640

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITD 317
                                     GS   + P    ++    V  + CG + S  +T 
Sbjct: 641 --------------------------GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTK 674

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
            G + ++G G   + G G+ +    P  +  L G ++  VAAG  H + ++ D +V+++G
Sbjct: 675 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
            N   Q         T P     P L+  H   ++CG
Sbjct: 735 SND--QCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 120/276 (43%), Gaps = 48/276 (17%)

Query: 205  DENLSAFPCLVTLNP---------GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG- 254
            +E+L+A P L + N          G  I   AAG      +    +V+ WG   + QLG 
Sbjct: 2910 EEDLAAVPFLASDNEEEEDEKGNSGSLIRKKAAGLESAATIR--TKVFVWGLNDKDQLGG 2967

Query: 255  -LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSA 313
              GS+I++            S+ +  SA                  N V+ +A G +   
Sbjct: 2968 LKGSKIKV-----------PSFSETLSAL-----------------NVVQ-VAGGSKSLF 2998

Query: 314  VITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVA--AGLWHTICISSD 370
             +T  G +   G    G+ G G +   +  P  +++L    ++ VA  +G  H   ++ D
Sbjct: 2999 AVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVD 3058

Query: 371  GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
            G V+++G    G+LG         PRL++A  L+    + ++CG+ H+A +   G+++ W
Sbjct: 3059 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEA--LKTKRIRDIACGSSHSAALTSSGELYTW 3116

Query: 431  GWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACG 465
            G  +YG+LG GD   +  P  V +  G     VACG
Sbjct: 3117 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3152



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 82/310 (26%), Positives = 121/310 (39%), Gaps = 47/310 (15%)

Query: 57   AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEG 116
            A A++   K+ +WG  DD G+    S  + + P          I   A G +H  A+T  
Sbjct: 3052 ATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 3110

Query: 117  GEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGT 176
            GE+YTWG  E    GR  G     T L   + +        QV+  S+ +++   T  G 
Sbjct: 3111 GELYTWGLGE---YGR-LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3166

Query: 177  DGR-GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLA 235
                G G+ G   R              G E  +    +  LN G  +  +  G + +LA
Sbjct: 3167 VFSWGDGDFGKLGR-------------GGSEGCNIPQNIERLN-GQGVCQIECGAQFSLA 3212

Query: 236  LSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF 295
            L+  G VW WG G   +LG GS +  V  P  +                         G 
Sbjct: 3213 LTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQVVE------------------------GL 3247

Query: 296  RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
            R  G  +  +A G  H   +TD+G +  +G   +GQ G G+T     P  V  L G +I 
Sbjct: 3248 R--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKIT 3305

Query: 356  GVAAGLWHTI 365
             VA G  H++
Sbjct: 3306 RVACGSSHSV 3315



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 5/73 (6%)

Query: 53   GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
            G  F++A++ S  + TWG  D   LG     S  H   P          ++  A G  HC
Sbjct: 4147 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRRPRQVQGLQGKKVIAIATGSLHC 4203

Query: 111  VAVTEGGEVYTWG 123
            V  TE GEVYTWG
Sbjct: 4204 VCCTEDGEVYTWG 4216


>gi|320163091|gb|EFW39990.1| chromosome condensation regulator RCC1 [Capsaspora owczarzaki ATCC
           30864]
          Length = 1230

 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 82/258 (31%), Positives = 120/258 (46%), Gaps = 10/258 (3%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGL----GSRIRMVSSPHPIPCIESSYGKD 278
           I  +A G  H+LAL+  GQV+ WG     QLGL     SR     S  P     S    D
Sbjct: 175 ITQIACGETHSLALTSNGQVFAWGDNKASQLGLTPSESSRQPSTRSSAPKTAAASIDDVD 234

Query: 279 R--SAALSRGSVNSEGPGFR-VPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG 335
              +A L+     +     R + G+ +  I CG   S V+++ G +  +G    GQ    
Sbjct: 235 ELDAATLAYMDFMTRPRLVRALTGHKIVQIVCGANFSLVLSERGDVFAWGDNTSGQLCLR 294

Query: 336 STDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLP 395
                  P  V  L GI I  +AAG  HT+ ++ +G VY++G NQFGQLG G     T+P
Sbjct: 295 ELKTVPVPTLVKELYGIPIRQLAAGGRHTLALTFNGQVYSWGNNQFGQLGVGDTAPHTIP 354

Query: 396 RLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TI 454
             L   +LE+     ++CG  H+ V+ + G V+ +G    GQLG G + +   P  +  +
Sbjct: 355 SRLK--TLEHQFCAHIACGEDHSVVLTETGGVYSFGAGGQGQLGHGTLQNEINPRMIFEL 412

Query: 455 EGCVPRNVACGWWHTLLL 472
            G     V CG  HT++ 
Sbjct: 413 MGKSASQVLCGRRHTIVF 430



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 96/372 (25%), Positives = 149/372 (40%), Gaps = 71/372 (19%)

Query: 72  TDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSG 131
           ++D GQ  +   KH   PE        +I + A G  H +A+T  G+V+ WG  +    G
Sbjct: 149 SNDQGQ--LGHKKHRSKPERVDALEPYTITQIACGETHSLALTSNGQVFAWGDNKASQLG 206

Query: 132 RVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRI 191
                                  LT   S R   +RSS   ++        E        
Sbjct: 207 -----------------------LTPSESSRQPSTRSSAPKTAAASIDDVDE-------- 235

Query: 192 SLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEG 251
                  ++++    +    P LV    G +I  +  G   +L LS+ G V+ WG    G
Sbjct: 236 ------LDAATLAYMDFMTRPRLVRALTGHKIVQIVCGANFSLVLSERGDVFAWGDNTSG 289

Query: 252 QLGLGSRIRMVSSPHPIP-CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGR 310
           QL L   ++ V    P+P  ++  YG                    +P   ++ +A GGR
Sbjct: 290 QLCL-RELKTV----PVPTLVKELYG--------------------IP---IRQLAAGGR 321

Query: 311 HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
           H+  +T  G + ++G   +GQ G G T     P+ + +L       +A G  H++ ++  
Sbjct: 322 HTLALTFNGQVYSWGNNQFGQLGVGDTAPHTIPSRLKTLEHQFCAHIACGEDHSVVLTET 381

Query: 371 GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV-IADDGKVFC 429
           G VY+FG    GQLG G  Q E  PR++    L    +  V CG RHT V      K++ 
Sbjct: 382 GGVYSFGAGGQGQLGHGTLQNEINPRMIF--ELMGKSASQVLCGRRHTIVFFPKTNKIYA 439

Query: 430 WGWNKYGQLGLG 441
           +G    GQLG G
Sbjct: 440 FGLGGNGQLGTG 451



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 121/298 (40%), Gaps = 67/298 (22%)

Query: 240 GQVWGWGYGGEGQLGL---GSRIRMVSSPHPIPCIES----------SYGKDRSAALSRG 286
           G VW WG   +GQLGL         V  P  +    S          + G+  +  L  G
Sbjct: 83  GSVWAWGNPTDGQLGLRLTNDHTLAVPEPTELEAFSSVSMSTLASAIACGRAHTLFLVDG 142

Query: 287 SVNSEGPGFR-----------------VPGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
            V S G   +                 +    +  IACG  HS  +T  G +  +G    
Sbjct: 143 QVYSCGSNDQGQLGHKKHRSKPERVDALEPYTITQIACGETHSLALTSNGQVFAWGDNKA 202

Query: 330 GQCG--------QGSTD--------------DELS------------PNCVSSLLGIQIE 355
            Q G        Q ST               DEL             P  V +L G +I 
Sbjct: 203 SQLGLTPSESSRQPSTRSSAPKTAAASIDDVDELDAATLAYMDFMTRPRLVRALTGHKIV 262

Query: 356 GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGA 415
            +  G   ++ +S  GDV+A+G N  GQL     +   +P L+    L  +  + ++ G 
Sbjct: 263 QIVCGANFSLVLSERGDVFAWGDNTSGQLCLRELKTVPVPTLVK--ELYGIPIRQLAAGG 320

Query: 416 RHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLL 472
           RHT  +  +G+V+ WG N++GQLG+GD     IPS++ T+E     ++ACG  H+++L
Sbjct: 321 RHTLALTFNGQVYSWGNNQFGQLGVGDTAPHTIPSRLKTLEHQFCAHIACGEDHSVVL 378


>gi|449481449|ref|XP_004156186.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC1-like [Cucumis sativus]
          Length = 390

 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 105/421 (24%), Positives = 171/421 (40%), Gaps = 61/421 (14%)

Query: 66  LITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWK 125
           +I WGS +D GQ  + + +  E           ++    AG  + +A+TE G+++TWGW 
Sbjct: 7   IIAWGSGED-GQLGLGNNEEREWVCAIKALESQNVCSVVAGSRNSLAITEDGKLFTWGWN 65

Query: 126 ECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEG 185
           +        G L    G   +    Q   L+     ++ +    G      D +G     
Sbjct: 66  Q-------RGTLGHPAGTKSENVPSQVKALSNVKIVQAAIG---GWHCLAVDDQGRAYAW 115

Query: 186 SKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGW 245
                    ++  +  ++G              P + +  VAAGG H++ L+  G VW W
Sbjct: 116 GGNEYGQCGEEPEKKDNTGRPPRRDIAIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTW 175

Query: 246 GYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPG-NYVKG 304
           G                    P P                G +       RV G + V+ 
Sbjct: 176 G-------------------QPWPP---------------GDITQISVPVRVQGLDMVRL 201

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           IA G  H+  + + G L  +G   YGQ G G T     P  V  L G+ +  +AAG WH+
Sbjct: 202 IAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHS 261

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQ--AETLPRLLDAPSLENVHSKSVSCGARHTAVIA 422
             ++ +G+VY +G  + G+LG G +   ++ +P+ +   S E +    +SCG  H+  + 
Sbjct: 262 TALTDNGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLLSGEEI--VQISCGGTHSVAVT 319

Query: 423 DDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRN-----------VACGWWHTLL 471
            DG++F +G   +G+LG G  +    P +V I+   PR            VACG  HTL 
Sbjct: 320 SDGRMFSFGRGDHGRLGYGRKVTTGQPEEVPIDIPPPRGRTENGHWIAKLVACGGRHTLA 379

Query: 472 L 472
           L
Sbjct: 380 L 380



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 109/388 (28%), Positives = 164/388 (42%), Gaps = 58/388 (14%)

Query: 47  RDVCG--GGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           ++VC    G   ++AI++  KL TWG        +    K   +P      +   IV+AA
Sbjct: 38  QNVCSVVAGSRNSLAITEDGKLFTWGWNQRGTLGHPAGTKSENVPSQVKALSNVKIVQAA 97

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G  HC+AV + G  Y WG  E    G    +    TG       R+   + ++ +P+  
Sbjct: 98  IGGWHCLAVDDQGRAYAWGGNEYGQCGEEP-EKKDNTGRPP----RRDIAIPQRCAPKLI 152

Query: 165 VSR-SSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRI 223
           V + ++GGT S    R    EG             +    GD    + P  V     VR+
Sbjct: 153 VRQVAAGGTHSVVLTR----EGH-------VWTWGQPWPPGDITQISVPVRVQGLDMVRL 201

Query: 224 ATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAAL 283
             +A G  H LAL + G +W WG    GQLG G   +  S P P+  +            
Sbjct: 202 --IAVGAFHNLALQEDGTLWAWGNNEYGQLGTGD-TQPRSQPIPVQGLS----------- 247

Query: 284 SRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDD--EL 341
                          G  +  IA GG HS  +TD G +  +G G +G+ G G  D   ++
Sbjct: 248 ---------------GLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGRLGFGDNDKSSKM 292

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD----QAETLPRL 397
            P  V  L G +I  ++ G  H++ ++SDG +++FG    G+LG G      Q E +P  
Sbjct: 293 VPQKVQLLSGEEIVQISCGGTHSVAVTSDGRMFSFGRGDHGRLGYGRKVTTGQPEEVPID 352

Query: 398 LDAP--SLENVH--SKSVSCGARHTAVI 421
           +  P    EN H  +K V+CG RHT  +
Sbjct: 353 IPPPRGRTENGHWIAKLVACGGRHTLAL 380


>gi|452822986|gb|EME30000.1| E3 ubiquitin-protein ligase HERC1 [Galdieria sulphuraria]
          Length = 456

 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 101/298 (33%), Positives = 142/298 (47%), Gaps = 32/298 (10%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI---- 259
           G  + S  P L+ +     I  VA GG HTL L + G +  +GY   GQLG G+++    
Sbjct: 27  GTRDDSCQPELIKVFENCAIQQVACGGGHTLVLLEDGCLHSFGYNQYGQLGNGTKVDSPL 86

Query: 260 ---RMVSSPHPIPCIESSYGKDRSAALS-RGSVNSEGPGF--RVPGN------------- 300
              R +SS      I  + G+  SAAL   G+V + G G   R+  N             
Sbjct: 87  DASRDISSLSN-KLIAVACGRYHSAALDVNGTVFTWGGGKNGRLGHNDEQTRTIPCRITH 145

Query: 301 --YVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN-CVSSLLGIQIEGV 357
                 I CG   +A ITD G L T+GWG +GQ GQGS +D   P   +     + I  +
Sbjct: 146 LPRAHKIFCGYHITAAITDDG-LYTWGWGEHGQLGQGSLEDSYGPKKVIFDDANLAISQL 204

Query: 358 AAGLWHTICISSDGDVYAFGGNQFGQLGTGG-DQAETLPRLLDAPSLENVHSKSVSCGAR 416
           A G  H +  +  GDVY +G N+FGQLG G  ++  + P LL   SL  +    V+ G R
Sbjct: 205 ACGDRHCLVRTESGDVYTWGSNEFGQLGIGRYNEIYSSPVLL--TSLAGMMVTFVAAGDR 262

Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLA 473
           H+A + + G +F WG    GQ G GD  D ++P  V ++ G     V CG   T+ L+
Sbjct: 263 HSAAVTNTGSLFTWGCGAEGQCGHGDYNDCDMPFLVESLVGVFILKVFCGHNFTVALS 320



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 109/415 (26%), Positives = 174/415 (41%), Gaps = 60/415 (14%)

Query: 63  SRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTW 122
           S  L TWG   +       +      PE   +    +I + A G  H + + E G ++++
Sbjct: 9   SSALYTWGRAKNYRLGRRGTRDDSCQPELIKVFENCAIQQVACGGGHTLVLLEDGCLHSF 68

Query: 123 GWKECVPSGRVFGDLSTGTGLDK--DVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGR- 179
           G+ +       +G L  GT +D   D     SS   + ++       S+    +GT    
Sbjct: 69  GYNQ-------YGQLGNGTKVDSPLDASRDISSLSNKLIAVACGRYHSAALDVNGTVFTW 121

Query: 180 GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDI 239
           G G+ G                   DE     PC +T  P  R   +  G   T A++D 
Sbjct: 122 GGGKNGRL--------------GHNDEQTRTIPCRITHLP--RAHKIFCGYHITAAITDD 165

Query: 240 GQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPG 299
           G ++ WG+G  GQLG GS             +E SYG  +               F    
Sbjct: 166 G-LYTWGWGEHGQLGQGS-------------LEDSYGPKKVI-------------FDDAN 198

Query: 300 NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVA 358
             +  +ACG RH  V T++G + T+G   +GQ G G  ++  S P  ++SL G+ +  VA
Sbjct: 199 LAISQLACGDRHCLVRTESGDVYTWGSNEFGQLGIGRYNEIYSSPVLLTSLAGMMVTFVA 258

Query: 359 AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
           AG  H+  +++ G ++ +G    GQ G G      +P L++  SL  V    V CG   T
Sbjct: 259 AGDRHSAAVTNTGSLFTWGCGAEGQCGHGDYNDCDMPFLVE--SLVGVFILKVFCGHNFT 316

Query: 419 AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLL 471
             ++ D  ++ +G N YGQLG G       P ++  +I G +  ++ CG +H  L
Sbjct: 317 VALSKDNDIYVFGNNSYGQLGDGSKSSCCTPRKLFFSIPGTI--DITCGHFHCTL 369



 Score = 45.8 bits (107), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 65/214 (30%), Positives = 88/214 (41%), Gaps = 35/214 (16%)

Query: 54  CGFAM--AISDSRKLITWG--STDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAH 109
           CG+ +  AI+D   L TWG      LGQ  +    +G     F      +I + A G  H
Sbjct: 154 CGYHITAAITDD-GLYTWGWGEHGQLGQGSLED-SYGPKKVIFD-DANLAISQLACGDRH 210

Query: 110 CVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFER---QSSFLTEQVSPRSQVS 166
           C+  TE G+VYTWG  E       FG L  G G   +++      +S     V+  +   
Sbjct: 211 CLVRTESGDVYTWGSNE-------FGQL--GIGRYNEIYSSPVLLTSLAGMMVTFVAAGD 261

Query: 167 RSSGG-TSSGTDGR-GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
           R S   T++G+    G G EG                  GD N    P LV    GV I 
Sbjct: 262 RHSAAVTNTGSLFTWGCGAEGQ--------------CGHGDYNDCDMPFLVESLVGVFIL 307

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR 258
            V  G   T+ALS    ++ +G    GQLG GS+
Sbjct: 308 KVFCGHNFTVALSKDNDIYVFGNNSYGQLGDGSK 341


>gi|255081710|ref|XP_002508077.1| E3 ubiquitin-protein ligase [Micromonas sp. RCC299]
 gi|226523353|gb|ACO69335.1| E3 ubiquitin-protein ligase [Micromonas sp. RCC299]
          Length = 1348

 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 141/296 (47%), Gaps = 46/296 (15%)

Query: 200 SSSSGDENLSAFPCLVTLNP--GVRIATVAAGGRHTLALSDIGQVWGWGY-GGEGQLGLG 256
           +S    E   A+P   +++   G  +  VA G RH++A++  G+V+ +G   GEG+  L 
Sbjct: 185 TSRDSSEAAEAYPTPRSVSSLDGRDVTHVAGGARHSVAVTSAGEVYAFGDCSGEGK-ALS 243

Query: 257 SRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVIT 316
           +  R+  +    P + ++     + A+ R                V  +ACG RH A +T
Sbjct: 244 APTRLREAVIDPPEVTAT-----TNAMPR----------------VATVACGQRHCAAVT 282

Query: 317 DAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLL----------------GIQIEGVAAG 360
            +G LL++G   +GQ GQG   D  S     SL+                 ++   VA G
Sbjct: 283 TSGVLLSWGNEEFGQLGQGPPRDSSSKGDAKSLIRRRADASMMPRLVGSGHVKFTSVACG 342

Query: 361 LWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
             HT+ ++++G V++FG   FG LG G      +PRL+DA  L  V    ++ G  H+A 
Sbjct: 343 AGHTLALTANGRVFSFGRGAFGALGHGDRLNCDVPRLVDA--LWGVGVAQIAAGDNHSAS 400

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI---EGCVPRNVACGWWHTLLLA 473
           ++  G+V+ WG  KYG LG  DV +R+ P+ V      G     +ACG  HTL +A
Sbjct: 401 LSASGRVYTWGRGKYGALGHRDVDNRSRPTPVQALDDAGVRCEQIACGGDHTLAIA 456



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 112/383 (29%), Positives = 160/383 (41%), Gaps = 54/383 (14%)

Query: 81  TSGKHGEIPEPFPLPTEAS------IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVF 134
           TS    E  E +P P   S      +   A G  H VAVT  GEVY +G  +C   G+  
Sbjct: 185 TSRDSSEAAEAYPTPRSVSSLDGRDVTHVAGGARHSVAVTSAGEVYAFG--DCSGEGKA- 241

Query: 135 GDLSTGTGLDKDVFERQSSFLTEQVSPRSQV-----SRSSGGTSSGT----DGRGSGEEG 185
             LS  T L + V +      T    PR           +  T+SG          G+ G
Sbjct: 242 --LSAPTRLREAVIDPPEVTATTNAMPRVATVACGQRHCAAVTTSGVLLSWGNEEFGQLG 299

Query: 186 SKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGW 245
               R S +K  A+S      + S  P LV  +  V+  +VA G  HTLAL+  G+V+ +
Sbjct: 300 QGPPRDSSSKGDAKSLIRRRADASMMPRLVG-SGHVKFTSVACGAGHTLALTANGRVFSF 358

Query: 246 GYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGI 305
           G G  G LG G R+        +P +  +                        G  V  I
Sbjct: 359 GRGAFGALGHGDRLNC-----DVPRLVDALW----------------------GVGVAQI 391

Query: 306 ACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSL--LGIQIEGVAAGLWH 363
           A G  HSA ++ +G + T+G G YG  G    D+   P  V +L   G++ E +A G  H
Sbjct: 392 AAGDNHSASLSASGRVYTWGRGKYGALGHRDVDNRSRPTPVQALDDAGVRCEQIACGGDH 451

Query: 364 TICISSDGD--VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
           T+ I+  G   + A+G    G  GTG       P ++D   L +     +S G++H+  +
Sbjct: 452 TLAIAGGGSGVLLAWGRGSSGPAGTGATADVLTPTIIDRALLGDEKVFQISAGSKHSVAV 511

Query: 422 ADDGKVFCWGWNKYGQLG--LGD 442
            + G V+ WG    GQLG  LGD
Sbjct: 512 TEGGCVYTWGARTQGQLGHELGD 534



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/241 (30%), Positives = 108/241 (44%), Gaps = 17/241 (7%)

Query: 216 TLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSY 275
           T N   R+ATVA G RH  A++  G +  WG    GQLG G            P  +SS 
Sbjct: 261 TTNAMPRVATVACGQRHCAAVTTSGVLLSWGNEEFGQLGQG------------PPRDSSS 308

Query: 276 GKDRSAALSRGSVNSEGPGFRVPGNYVK--GIACGGRHSAVITDAGALLTFGWGLYGQCG 333
             D  + + R +  S  P   V   +VK   +ACG  H+  +T  G + +FG G +G  G
Sbjct: 309 KGDAKSLIRRRADASMMPRL-VGSGHVKFTSVACGAGHTLALTANGRVFSFGRGAFGALG 367

Query: 334 QGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAET 393
            G   +   P  V +L G+ +  +AAG  H+  +S+ G VY +G  ++G LG       +
Sbjct: 368 HGDRLNCDVPRLVDALWGVGVAQIAAGDNHSASLSASGRVYTWGRGKYGALGHRDVDNRS 427

Query: 394 LPRLLDAPSLENVHSKSVSCGARHTAVIA--DDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
            P  + A     V  + ++CG  HT  IA    G +  WG    G  G G   D   P+ 
Sbjct: 428 RPTPVQALDDAGVRCEQIACGGDHTLAIAGGGSGVLLAWGRGSSGPAGTGATADVLTPTI 487

Query: 452 V 452
           +
Sbjct: 488 I 488



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 82/327 (25%), Positives = 127/327 (38%), Gaps = 43/327 (13%)

Query: 47  RDV--CGGGCGFAMAISDSRKLITWGSTDDLGQ--SYVTSGKHGEIPEPFPLPTEASIVK 102
           RDV    GG   ++A++ + ++  +G     G+  S  T  +   I  P    T  ++ +
Sbjct: 208 RDVTHVAGGARHSVAVTSAGEVYAFGDCSGEGKALSAPTRLREAVIDPPEVTATTNAMPR 267

Query: 103 AAA---GWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQV 159
            A    G  HC AVT  G + +WG +E    G+     S+  G  K +  R++      +
Sbjct: 268 VATVACGQRHCAAVTTSGVLLSWGNEEFGQLGQGPPRDSSSKGDAKSLIRRRAD---ASM 324

Query: 160 SPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
            PR   S     TS       +    +  R  S  +    +   GD      P LV    
Sbjct: 325 MPRLVGSGHVKFTSVACGAGHTLALTANGRVFSFGRGAFGALGHGDRLNCDVPRLVDALW 384

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP--------CI 271
           GV +A +AAG  H+ +LS  G+V+ WG G  G LG    +   S P P+         C 
Sbjct: 385 GVGVAQIAAGDNHSASLSASGRVYTWGRGKYGALG-HRDVDNRSRPTPVQALDDAGVRCE 443

Query: 272 ESSYGKDRSAALS-----------RGSVNSEGPGFRVP-------------GNYVKGIAC 307
           + + G D + A++           RGS    G G                    V  I+ 
Sbjct: 444 QIACGGDHTLAIAGGGSGVLLAWGRGSSGPAGTGATADVLTPTIIDRALLGDEKVFQISA 503

Query: 308 GGRHSAVITDAGALLTFGWGLYGQCGQ 334
           G +HS  +T+ G + T+G    GQ G 
Sbjct: 504 GSKHSVAVTEGGCVYTWGARTQGQLGH 530


>gi|4079811|gb|AAD08658.1| Herc2 [Mus musculus]
          Length = 4836

 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 86/292 (29%), Positives = 146/292 (50%), Gaps = 31/292 (10%)

Query: 186 SKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAA--GGRHTLALSDIGQVW 243
           +++R + L++     + + + ++ A P LV       I  +AA   G H LAL+  G+V+
Sbjct: 460 AEKRFLILSRNGRVYTQAYNSDMLA-PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY 518

Query: 244 GWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVK 303
            WG G  G+LG G  +     P   P + S++   ++                  G +V 
Sbjct: 519 SWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA------------------GKHVV 555

Query: 304 GIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA--AGL 361
            IACG  +SA IT  G L T+G G YG+ G GS++DE  P  V+ L G+++  VA  +G 
Sbjct: 556 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGD 615

Query: 362 WHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
             T+ ++ +G V+++G   +G+LG GG      P+L++   L+++    V CG++ +  +
Sbjct: 616 AQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE--KLQDLDVIKVRCGSQFSIAL 673

Query: 422 ADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
             DG+V+ WG     +LG G       P  +  ++G    +VA G  H L+L
Sbjct: 674 TKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVL 725



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 82/303 (27%), Positives = 127/303 (41%), Gaps = 80/303 (26%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GGRH  AL+  G+V+ WG G +G+LG  SR+     P  I  +++   +D  
Sbjct: 3048 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIQALKTKRIRD-- 3104

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                    IA G  HSA +T +G L T+G G YG+ G G    +
Sbjct: 3105 ------------------------IAYGSSHSAPLTSSGELYTWGLGEYGRLGHGDNTTQ 3140

Query: 341  LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V  LLG ++  VA G     T+ ++ +G V+++G   FG+LG GG +   +P+ +
Sbjct: 3141 LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNI 3200

Query: 399  DAPSLE------------------------------------NVHSKS------------ 410
            +  + +                                    +VH +             
Sbjct: 3201 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI 3260

Query: 411  --VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWW 467
              V+ GA H   + D G+V+ WG N +GQ G G       P+ V  +EG     VACG  
Sbjct: 3261 VHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3320

Query: 468  HTL 470
            H++
Sbjct: 3321 HSV 3323



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 144/365 (39%), Gaps = 82/365 (22%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V   +G  HC+A++  GEVY+WG  E         D   G G ++   +R    + E + 
Sbjct: 4044 VAVNSGGKHCLALSSEGEVYSWGEAE---------DGKLGHG-NRSPCDRPR--VIESLR 4091

Query: 161  PRSQVSRSSGGTSSG-TDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
                V  ++GG  S      G      K R   L    +E            P LV    
Sbjct: 4092 GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLK--------PKLVEALQ 4143

Query: 220  GVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
            G R+  +A  +G   TL L+D   VW WG G  G+LG G                   G 
Sbjct: 4144 GHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-------------------GS 4184

Query: 278  DRSAALSRGSVNSEGPGFRVPGNY-------VKGIACGGRHSAVITDAGALLTFGWGLYG 330
            D               G +VP          V  + CG + S  +T +GA+ T+G G Y 
Sbjct: 4185 D---------------GCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4229

Query: 331  QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            + G GS D    P  V  L G ++  +A G  H +C + DG+VY +G N  GQLG G   
Sbjct: 4230 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTN 4289

Query: 391  AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
            A   PRL+ A  L+      V+CG+ HT           W  +K    G        +P+
Sbjct: 4290 AIQRPRLVAA--LQGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPA 4331

Query: 451  QVTIE 455
            QV +E
Sbjct: 4332 QVPME 4336



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 115/402 (28%), Positives = 161/402 (40%), Gaps = 86/402 (21%)

Query: 65   KLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGW 124
            K+  WG  +D  Q     G   ++P      +  ++V+ A G     AVT  G+VY+ G 
Sbjct: 2961 KVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGE 3019

Query: 125  KECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG---TSSGTDGR-- 179
                 +GR+   +S+GT        RQ + L+  V  +  V+  SGG   T+   DG+  
Sbjct: 3020 ---ATNGRLGLGMSSGTV----PIPRQITALSSYVVKK--VAVHSGGRHATALTVDGKVF 3070

Query: 180  --GSGEEGS----------KRRRISLAK------------QTAESSSSG----------- 204
              G G++G           K R I   K             +A  +SSG           
Sbjct: 3071 SWGEGDDGKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYTWGLGEYG 3130

Query: 205  -----DENLSAFPCLVTLNPGVRIATVAAGGR--HTLALSDIGQVWGWGYGGEGQLGLGS 257
                 D      P +V +  G R+  VA G R   TLAL+D G V+ WG G  G+LG G 
Sbjct: 3131 RLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG 3190

Query: 258  RIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITD 317
                 S    IP                   N E    R+ G  V  I CG + S  +T 
Sbjct: 3191 -----SEGCNIP------------------QNIE----RLNGQGVCQIECGAQFSLALTK 3223

Query: 318  AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
            +G + T+G G Y + G GS      P  V  L G +I  VA G  H + ++  G VYA+G
Sbjct: 3224 SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 3283

Query: 378  GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
             N  GQ G G       P L+    LE      V+CG+ H+ 
Sbjct: 3284 DNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 3323



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/276 (25%), Positives = 123/276 (44%), Gaps = 50/276 (18%)

Query: 225  TVAAGGRHTLALSDIGQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAA 282
            T++AGG         G ++GWG+   GQLG   G+++++     P PC   +    R   
Sbjct: 3947 TLSAGGS--------GTIYGWGHNHRGQLGGIEGAKVKV-----PTPC--EALATLRPVQ 3991

Query: 283  LSRG-----SVNSEGPGF-------------------------RVPGNYVKGIAC--GGR 310
            L  G     +V ++G  +                          +   ++K +A   GG+
Sbjct: 3992 LIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGK 4051

Query: 311  HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
            H   ++  G + ++G    G+ G G+      P  + SL GI++  VAAG  H+ C+++ 
Sbjct: 4052 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAA 4111

Query: 371  GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
            GD+Y +G  ++G+LG    + +  P+L++A     V   +   G   T  + DD  V+ W
Sbjct: 4112 GDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSW 4171

Query: 431  GWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
            G   YG+LG G      +P ++ ++ G     V CG
Sbjct: 4172 GDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECG 4207



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 95/221 (42%), Gaps = 46/221 (20%)

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
           SS DE   A P LV    G+++  VA  +G   TLA+++ GQVW WG G  G+LG G   
Sbjct: 588 SSEDE---AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG--- 641

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITD 317
                                     GS   + P    ++    V  + CG + S  +T 
Sbjct: 642 --------------------------GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTK 675

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
            G + ++G G   + G G+ +    P  +  L G ++  VAAG  H + ++ D +V+++G
Sbjct: 676 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWG 735

Query: 378 GN----QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
            N     F  LG       T P     P L++ H   ++CG
Sbjct: 736 SNDQCQHFDTLGV------TKPEPTAFPGLDSKHIVGIACG 770



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 81/168 (48%), Gaps = 6/168 (3%)

Query: 302  VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVA-- 358
            V  +A G +    +T  G + + G    G+ G G +   +  P  +++L    ++ VA  
Sbjct: 2995 VVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVH 3054

Query: 359  AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
            +G  H   ++ DG V+++G    G+LG         PRL+ A  L+    + ++ G+ H+
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIQA--LKTKRIRDIAYGSSHS 3112

Query: 419  AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACG 465
            A +   G+++ WG  +YG+LG GD   +  P  V +  G     VACG
Sbjct: 3113 APLTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3160



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 5/73 (6%)

Query: 53   GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
            G  F++A++ S  + TWG  D   LG     S  H   P          ++  A G  HC
Sbjct: 4207 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRRPRQVQGLQGKKVIAIATGSLHC 4263

Query: 111  VAVTEGGEVYTWG 123
            V  TE GEVYTWG
Sbjct: 4264 VCCTEDGEVYTWG 4276


>gi|113205520|ref|NP_001037872.1| retinitis pigmentosa GTPase regulator [Xenopus (Silurana)
           tropicalis]
 gi|77808103|gb|ABB03733.1| RPGR 1-19 isoform [Xenopus (Silurana) tropicalis]
          Length = 729

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 145/305 (47%), Gaps = 56/305 (18%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLG--------SRIRMVS 263
           P  V      ++   A G  HTL  ++ G+++  G   EGQLGLG          I   +
Sbjct: 80  PTCVKALKSEKVVLAACGRHHTLVYTEQGKLYSSGGNSEGQLGLGDTAGRTSFQEISFFT 139

Query: 264 SPHPIPCIESSYGKDRSAALS-RGSV-----NSEG------------PGFRVPGNYVKGI 305
           + + I  +  S G + SAAL+  G +     NSEG            P     G  +  I
Sbjct: 140 AQYKIKQL--SAGSNMSAALTVDGKLFMWGDNSEGQLGLEKGTIYCTPQKVDTGKPIAWI 197

Query: 306 ACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS------LLGI--QIEGV 357
           +CG  HSA +T  G L TFG    G+ G       L P+ +        +LG+  ++  V
Sbjct: 198 SCGYYHSAFVTQDGELYTFGEPENGKLG-------LPPDKIKKHKKPQRVLGLSGKVTMV 250

Query: 358 AAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAET-LPRLLDAPSLENVHSKSVSCGAR 416
           + G  HTI ++ + +VY FG  QFGQLG G    ET +P+ +DA + + +  + V+CG  
Sbjct: 251 SCGGEHTIAVT-EKEVYTFGLGQFGQLGHGTFIFETHIPKAVDALTKKKI--RYVTCGEN 307

Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC------VPRNVACGWWHTL 470
           HTA+I + G ++ +G  ++G+LGLG   + N  +Q     C        ++VACG  H L
Sbjct: 308 HTAIITEKGLLYTFGDGRHGKLGLG---EENFTNQFVPILCSNFLKFTVQSVACGGCHML 364

Query: 471 LLAVP 475
           + A P
Sbjct: 365 VFATP 369



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 82/169 (48%), Gaps = 2/169 (1%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           I+CG  H+ ++T  G L  FG   +GQ G  +      P CV +L   ++   A G  HT
Sbjct: 42  ISCGDEHTVLVTGNGKLYVFGSNNWGQLGVEAGSAISKPTCVKALKSEKVVLAACGRHHT 101

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           +  +  G +Y+ GGN  GQLG G     T  + +   + +    K +S G+  +A +  D
Sbjct: 102 LVYTEQGKLYSSGGNSEGQLGLGDTAGRTSFQEISFFTAQ-YKIKQLSAGSNMSAALTVD 160

Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GK+F WG N  GQLGL        P +V     +   ++CG++H+  + 
Sbjct: 161 GKLFMWGDNSEGQLGLEKGTIYCTPQKVDTGKPIAW-ISCGYYHSAFVT 208



 Score = 43.1 bits (100), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 21/110 (19%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           +   G ++ FG ++F         AE +P       L+N     +SCG  HT ++  +GK
Sbjct: 10  VPDSGALFTFGKSKF---------AENIPSKF---WLKNDKPARISCGDEHTVLVTGNGK 57

Query: 427 VFCWGWNKYGQLGL--GDVIDRNIPSQVTI---EGCVPRNVACGWWHTLL 471
           ++ +G N +GQLG+  G  I +  P+ V     E  V    ACG  HTL+
Sbjct: 58  LYVFGSNNWGQLGVEAGSAISK--PTCVKALKSEKVVL--AACGRHHTLV 103


>gi|351715554|gb|EHB18473.1| RCC1 domain-containing protein 1 [Heterocephalus glaber]
          Length = 370

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 110/230 (47%), Gaps = 41/230 (17%)

Query: 284 SRGSVNSEGPGFRV--PGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL 341
           SR  V+ + P  R   P    + +  G  H+ ++  AG + ++G G +GQ G G+ + E 
Sbjct: 138 SRAYVSLQPPLRRALAPELRARRLELGIEHALLLDAAGQVFSWGGGRHGQLGHGTLEAEP 197

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLG-------------TGG 388
            P  + +L G+ +  +AAG WH++C+S  GD+Y +G N+ GQL              TG 
Sbjct: 198 EPRPLEALQGLPMSQLAAGGWHSVCVSETGDIYIWGWNESGQLALPTRSLAEGKRTDTGE 257

Query: 389 DQA---------------------ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKV 427
           D+                      +  P LLD P      +  VSCG+RHTAV+   G++
Sbjct: 258 DEGLNEDGSKVERAAEAPAPFIAIQPFPALLDLPL--GSEAVGVSCGSRHTAVVTRTGEL 315

Query: 428 FCWGWNKYGQLGLGDVIDRNIPSQVTI---EGCVPRNVACGWWHTLLLAV 474
           + WGW KYGQLG  D    + P +V     +    + V CG W+T + AV
Sbjct: 316 YTWGWGKYGQLGHKDSASLDRPCRVEYFVDKQLQVKTVTCGPWNTYVYAV 365



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 87/375 (23%), Positives = 136/375 (36%), Gaps = 67/375 (17%)

Query: 82  SGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGT 141
           SG+  ++  P PL     I   +A W++   VT GG V   G       G    D     
Sbjct: 23  SGREHQVLSPEPLRAGGDICHVSASWSYTALVTRGGRVELSGSASGAADG--CRDAWASE 80

Query: 142 GLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESS 201
           GL   + +R  S    Q  P     R     +   +     E G++ R   L       +
Sbjct: 81  GLLVLLRDRSGSRAELQAWPPGSGLRGEPLWAQDPEAEEGDEPGAEGRTGLLPLLPGSRA 140

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
               +     P    L P +R   +  G  H L L   GQV+ WG G  GQLG G+   +
Sbjct: 141 YVSLQP----PLRRALAPELRARRLELGIEHALLLDAAGQVFSWGGGRHGQLGHGT---L 193

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
            + P P P +E+  G   S                        +A GG HS  +++ G +
Sbjct: 194 EAEPEPRP-LEALQGLPMSQ-----------------------LAAGGWHSVCVSETGDI 229

Query: 322 LTFGWGLYGQCG-----------------QGSTDD-----------------ELSPNCVS 347
             +GW   GQ                   +G  +D                 +  P  + 
Sbjct: 230 YIWGWNESGQLALPTRSLAEGKRTDTGEDEGLNEDGSKVERAAEAPAPFIAIQPFPALLD 289

Query: 348 SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVH 407
             LG +  GV+ G  HT  ++  G++Y +G  ++GQLG     +   P  ++    + + 
Sbjct: 290 LPLGSEAVGVSCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSASLDRPCRVEYFVDKQLQ 349

Query: 408 SKSVSCGARHTAVIA 422
            K+V+CG  +T V A
Sbjct: 350 VKTVTCGPWNTYVYA 364


>gi|146298949|ref|YP_001193540.1| regulator of chromosome condensation, RCC1 [Flavobacterium
           johnsoniae UW101]
 gi|146153367|gb|ABQ04221.1| regulator of chromosome condensation, RCC1 [Flavobacterium
           johnsoniae UW101]
          Length = 1679

 Score =  108 bits (271), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 108/430 (25%), Positives = 175/430 (40%), Gaps = 61/430 (14%)

Query: 27  RSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHG 86
           R  +L  L+          W+     G    +A+ +   L TWG+ D+ GQ  + +    
Sbjct: 2   RKTLLLILIFSFIQIKAQCWK-TAAAGYSHTVAVRNDGTLWTWGNNDE-GQ--LGNSTPA 57

Query: 87  EIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKD 146
            I  P  + T  +   AAAGW H VA+   G ++ WG+      G   G+ +T   L + 
Sbjct: 58  AINIPTKMGTANNWKTAAAGWGHTVALKTDGTLWAWGYGRLGQLGN--GNYNTNFNLPQQ 115

Query: 147 VFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDE 206
           +   ++ + T        V+  + GT        SG+ G+     S  + T     S D 
Sbjct: 116 I-GTENDWQTIAAGHGHTVALKNDGTLWAWGNNFSGQLGNG---TSFDRNTPTKIGS-DS 170

Query: 207 NLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPH 266
           N  A               ++AGG +T+AL   G +W WG    G LG G+     ++ +
Sbjct: 171 NWLA---------------ISAGGLYTIALKKDGTLWAWGKNTYGTLGDGT-----TTNN 210

Query: 267 PIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGW 326
            +P      G D                        K IA G  H+  I + G+L  +G 
Sbjct: 211 RVP---KQIGTDTDW---------------------KTIAAGSDHTIAIKNDGSLWIWGK 246

Query: 327 GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
             YG  G  +T D++ P  + +      +    G+ +T+ I +DG ++A+G N  G  G 
Sbjct: 247 NTYGALGDNTTIDKIVPTKIGT--DTDWKSAEGGVDYTVAIKTDGTLWAWGYNADGVFGN 304

Query: 387 GGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR 446
           G      +P  +        + + VS G+ HT  +  D  ++ WG N YGQLG G  I++
Sbjct: 305 GSKINSLIPVQIGTEK----NWQMVSGGSVHTVAVKTDESLWSWGNNSYGQLGDGTSIEK 360

Query: 447 NIPSQVTIEG 456
           NIP+ +   G
Sbjct: 361 NIPTLLNCAG 370



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 72/249 (28%), Positives = 111/249 (44%), Gaps = 37/249 (14%)

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
           T AAG  HT+A+ + G +W WG   EGQLG        S+P  I  I +  G        
Sbjct: 23  TAAAGYSHTVAVRNDGTLWTWGNNDEGQLG-------NSTPAAIN-IPTKMGT------- 67

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS-P 343
                          N  K  A G  H+  +   G L  +G+G  GQ G G+ +   + P
Sbjct: 68  --------------ANNWKTAAAGWGHTVALKTDGTLWAWGYGRLGQLGNGNYNTNFNLP 113

Query: 344 NCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSL 403
             + +    Q   +AAG  HT+ + +DG ++A+G N  GQLG G       P  + + S 
Sbjct: 114 QQIGTENDWQT--IAAGHGHTVALKNDGTLWAWGNNFSGQLGNGTSFDRNTPTKIGSDS- 170

Query: 404 ENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVA 463
              +  ++S G  +T  +  DG ++ WG N YG LG G   +  +P Q+  +    + +A
Sbjct: 171 ---NWLAISAGGLYTIALKKDGTLWAWGKNTYGTLGDGTTTNNRVPKQIGTD-TDWKTIA 226

Query: 464 CGWWHTLLL 472
            G  HT+ +
Sbjct: 227 AGSDHTIAI 235



 Score = 42.4 bits (98), Expect = 0.58,   Method: Composition-based stats.
 Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 1/69 (1%)

Query: 409 KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWH 468
           K+ + G  HT  + +DG ++ WG N  GQLG       NIP+++       +  A GW H
Sbjct: 22  KTAAAGYSHTVAVRNDGTLWTWGNNDEGQLGNSTPAAINIPTKMGTANNW-KTAAAGWGH 80

Query: 469 TLLLAVPPT 477
           T+ L    T
Sbjct: 81  TVALKTDGT 89


>gi|344298015|ref|XP_003420690.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Loxodonta africana]
          Length = 4838

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 79/251 (31%), Positives = 122/251 (48%), Gaps = 32/251 (12%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            ++   V +GG+H LALS  G+V+ WG   +G+LG G+R          PC       DR 
Sbjct: 4043 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR---------SPC-------DRP 4086

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
              +             + G  V  +A GG HSA +T AG L T+G G YG+ G   ++D+
Sbjct: 4087 RVVE-----------SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQ 4135

Query: 341  LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V +L G ++  +A  +G   T+C++ D  V+++G   +G+LG GG     +P  +
Sbjct: 4136 LKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKI 4195

Query: 399  DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGC 457
            D  SL  +    V CG++ +  +   G V+ WG   Y +LG G       P QV  ++G 
Sbjct: 4196 D--SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGK 4253

Query: 458  VPRNVACGWWH 468
                +A G  H
Sbjct: 4254 KVIAIATGSLH 4264



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 130/255 (50%), Gaps = 29/255 (11%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++IA   + G H LAL+  G+V+ WG G  G+LG G  +     P   P + S++   ++
Sbjct: 497 IKIAA-HSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 550

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                             G +V  IACG  +SA IT  G L T+G G YG+ G GS++DE
Sbjct: 551 ------------------GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 592

Query: 341 LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           + P  V+ L G+++  VA  +G   T+ ++ +G V+++G   +G+LG GG      P+L+
Sbjct: 593 VIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLI 652

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGC 457
           +   L+++    V CG++ +  +  DG+V+ WG     +LG G       P  +  ++G 
Sbjct: 653 E--KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGK 710

Query: 458 VPRNVACGWWHTLLL 472
              +VA G  H L L
Sbjct: 711 KVIDVAAGSTHCLAL 725



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/303 (27%), Positives = 128/303 (42%), Gaps = 80/303 (26%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GGRH  AL+  G+V+ WG G +G+LG  SR+     P  I  +++   +D  
Sbjct: 3049 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRD-- 3105

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                    IACG  HSA IT +G L T+G G YG+ G G    +
Sbjct: 3106 ------------------------IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQ 3141

Query: 341  LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V  LLG ++  VA G     T+ ++ +G V+++G   FG+LG GG +   +P+ +
Sbjct: 3142 LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNI 3201

Query: 399  DAPSLE------------------------------------NVHSKS------------ 410
            +  + +                                    +VH +             
Sbjct: 3202 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI 3261

Query: 411  --VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWW 467
              V+ GA H   + D G+V+ WG N +GQ G G       P+ V  +EG     VACG  
Sbjct: 3262 VHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3321

Query: 468  HTL 470
            H++
Sbjct: 3322 HSV 3324



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 78/271 (28%), Positives = 117/271 (43%), Gaps = 45/271 (16%)

Query: 212  PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG-------LGSRIRMVSS 264
            P +V    G+ +  VAAGG H+  ++  G ++ WG G  G+LG       L  ++     
Sbjct: 4086 PRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQ 4145

Query: 265  PHPIPCIESSYGKDRSAALS------------RGSVNSEGP-GFRVPGNY-------VKG 304
             H +  I    G  ++  L+             G +   G  G +VP          V  
Sbjct: 4146 GHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK 4205

Query: 305  IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
            + CG + S  +T +GA+ T+G G Y + G GS D    P  V  L G ++  +A G  H 
Sbjct: 4206 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHC 4265

Query: 365  ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
            +C + DG+VY +G N  GQLG G   A   PRL+ A  L+      V+CG+ HT      
Sbjct: 4266 VCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA--LQGKKVNRVACGSAHT------ 4317

Query: 425  GKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
                 W  +K    G        +P+QV +E
Sbjct: 4318 ---LAWSTSKPTSTG-------KLPAQVPME 4338



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 111/401 (27%), Positives = 165/401 (41%), Gaps = 60/401 (14%)

Query: 53   GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
              G   A +   K+  WG  +D  Q     G   ++P      +  ++V+ A G     A
Sbjct: 2950 AAGLESAATIRTKVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 3008

Query: 113  VTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG- 171
            VT  G+VY  G      +GR+   LS+GT        RQ + L+  V  +  V+  SGG 
Sbjct: 3009 VTVEGKVYACGE---ATNGRLGLGLSSGTV----PIPRQITALSSYVVKK--VAVHSGGR 3059

Query: 172  --TSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIAT 225
              T+   DG+    G G++G         K    S  + D+     P L+      RI  
Sbjct: 3060 HATALTVDGKVFSWGEGDDG---------KLGHFSRMNCDK-----PRLIEALKTKRIRD 3105

Query: 226  VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS-----RIRMVSSPHPIPCIESSYGKDRS 280
            +A G  H+ A++  G+++ WG G  G+LG G      + +MV        I+ + G   +
Sbjct: 3106 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3165

Query: 281  AALS---RGSVNSEGPG-------------------FRVPGNYVKGIACGGRHSAVITDA 318
              L+    G V S G G                    R+ G  V  I CG + S  +T +
Sbjct: 3166 QTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3225

Query: 319  GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            G + T+G G Y + G GS      P  V  L G +I  VA G  H + ++  G VYA+G 
Sbjct: 3226 GVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGD 3285

Query: 379  NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            N  GQ G G       P L+    LE      V+CG+ H+ 
Sbjct: 3286 NDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 3324



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 120/268 (44%), Gaps = 42/268 (15%)

Query: 233  TLALSDIGQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAALSRG---- 286
            TL+    G ++GWG+   GQLG   G+++++     P PC   +    R   L  G    
Sbjct: 3949 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKV-----PTPC--EALAALRPVQLIGGEQTL 4001

Query: 287  -SVNSEGPGF-------------------------RVPGNYVKGIAC--GGRHSAVITDA 318
             +V ++G  +                          V   ++K +A   GG+H   ++  
Sbjct: 4002 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESVQHVFIKKVAVNSGGKHCLALSSE 4061

Query: 319  GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            G + ++G    G+ G G+      P  V SL GI++  VAAG  H+ C+++ GD+Y +G 
Sbjct: 4062 GEVYSWGEAEDGKLGHGNRSPCDRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGK 4121

Query: 379  NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
             ++G+LG    + +  P+L++A     V   +   G   T  + DD  V+ WG   YG+L
Sbjct: 4122 GRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKL 4181

Query: 439  GLGDVIDRNIPSQV-TIEGCVPRNVACG 465
            G G      +P ++ ++ G     V CG
Sbjct: 4182 GRGGSDGCKVPMKIDSLTGLGVVKVECG 4209



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 82/168 (48%), Gaps = 6/168 (3%)

Query: 302  VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVA-- 358
            V  +A G +    +T  G +   G    G+ G G +   +  P  +++L    ++ VA  
Sbjct: 2996 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVH 3055

Query: 359  AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
            +G  H   ++ DG V+++G    G+LG         PRL++A  L+    + ++CG+ H+
Sbjct: 3056 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA--LKTKRIRDIACGSSHS 3113

Query: 419  AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACG 465
            A I   G+++ WG  +YG+LG GD   +  P  V +  G     VACG
Sbjct: 3114 AAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3161



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 92/217 (42%), Gaps = 38/217 (17%)

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
           SS DE     P LV    G+++  VA  +G   TLA+++ GQVW WG G  G+LG G   
Sbjct: 588 SSEDE---VIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG--- 641

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITD 317
                                     GS   + P    ++    V  + CG + S  +T 
Sbjct: 642 --------------------------GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTK 675

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
            G + ++G G   + G G+ +    P  +  L G ++  VAAG  H + ++ D +V+++G
Sbjct: 676 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
            N   Q        +  P  L  P L+  H   ++CG
Sbjct: 736 SNDQCQHFDTLRVTKPEPSAL--PGLDTKHIVGIACG 770



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 5/73 (6%)

Query: 53   GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
            G  F++A++ S  + TWG  D   LG     S  H   P          ++  A G  HC
Sbjct: 4209 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRRPRQVQGLQGKKVIAIATGSLHC 4265

Query: 111  VAVTEGGEVYTWG 123
            V  TE GEVYTWG
Sbjct: 4266 VCCTEDGEVYTWG 4278



 Score = 40.4 bits (93), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 72/149 (48%), Gaps = 3/149 (2%)

Query: 324  FGWGL--YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
            +GWG    GQ G         P    +L  ++   +  G      +++DG +YA G    
Sbjct: 3959 YGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGYGAG 4018

Query: 382  GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
            G+LG GG ++ + P LL++     +   +V+ G +H   ++ +G+V+ WG  + G+LG G
Sbjct: 4019 GRLGIGGTESVSTPTLLESVQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG 4078

Query: 442  DVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            +    + P  V ++ G    +VA G  H+
Sbjct: 4079 NRSPCDRPRVVESLRGIEVVDVAAGGAHS 4107


>gi|188038845|gb|ACD47036.1| ASL1/Herc2 fusion protein [Mus musculus]
          Length = 4746

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 86/292 (29%), Positives = 146/292 (50%), Gaps = 31/292 (10%)

Query: 186 SKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAA--GGRHTLALSDIGQVW 243
           +++R + L++     + + + ++ A P LV       I  +AA   G H LAL+  G+V+
Sbjct: 370 AEKRFLILSRNGRVYTQAYNSDMLA-PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY 428

Query: 244 GWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVK 303
            WG G  G+LG G  +     P   P + S++   ++                  G +V 
Sbjct: 429 SWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA------------------GKHVV 465

Query: 304 GIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA--AGL 361
            IACG  +SA IT  G L T+G G YG+ G GS++DE  P  V+ L G+++  VA  +G 
Sbjct: 466 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGD 525

Query: 362 WHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
             T+ ++ +G V+++G   +G+LG GG      P+L++   L+++    V CG++ +  +
Sbjct: 526 AQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE--KLQDLDVIKVRCGSQFSIAL 583

Query: 422 ADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
             DG+V+ WG     +LG G       P  +  ++G    +VA G  H L+L
Sbjct: 584 TKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVL 635



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 82/303 (27%), Positives = 127/303 (41%), Gaps = 80/303 (26%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GGRH  AL+  G+V+ WG G +G+LG  SR+     P  I  +++   +D  
Sbjct: 2958 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIQALKTKRIRD-- 3014

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                    IA G  HSA +T +G L T+G G YG+ G G    +
Sbjct: 3015 ------------------------IAYGSSHSAPLTSSGELYTWGLGEYGRLGHGDNTTQ 3050

Query: 341  LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V  LLG ++  VA G     T+ ++ +G V+++G   FG+LG GG +   +P+ +
Sbjct: 3051 LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNI 3110

Query: 399  DAPSLE------------------------------------NVHSKS------------ 410
            +  + +                                    +VH +             
Sbjct: 3111 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI 3170

Query: 411  --VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWW 467
              V+ GA H   + D G+V+ WG N +GQ G G       P+ V  +EG     VACG  
Sbjct: 3171 VHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3230

Query: 468  HTL 470
            H++
Sbjct: 3231 HSV 3233



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 144/365 (39%), Gaps = 82/365 (22%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V   +G  HC+A++  GEVY+WG  E         D   G G ++   +R    + E + 
Sbjct: 3954 VAVNSGGKHCLALSSEGEVYSWGEAE---------DGKLGHG-NRSPCDRPR--VIESLR 4001

Query: 161  PRSQVSRSSGGTSSG-TDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
                V  ++GG  S      G      K R   L    +E            P LV    
Sbjct: 4002 GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLK--------PKLVEALQ 4053

Query: 220  GVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
            G R+  +A  +G   TL L+D   VW WG G  G+LG G                   G 
Sbjct: 4054 GHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-------------------GS 4094

Query: 278  DRSAALSRGSVNSEGPGFRVPGNY-------VKGIACGGRHSAVITDAGALLTFGWGLYG 330
            D               G +VP          V  + CG + S  +T +GA+ T+G G Y 
Sbjct: 4095 D---------------GCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4139

Query: 331  QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            + G GS D    P  V  L G ++  +A G  H +C + DG+VY +G N  GQLG G   
Sbjct: 4140 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTN 4199

Query: 391  AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
            A   PRL+ A  L+      V+CG+ HT           W  +K    G        +P+
Sbjct: 4200 AIQRPRLVAA--LQGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPA 4241

Query: 451  QVTIE 455
            QV +E
Sbjct: 4242 QVPME 4246



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 115/402 (28%), Positives = 161/402 (40%), Gaps = 86/402 (21%)

Query: 65   KLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGW 124
            K+  WG  +D  Q     G   ++P      +  ++V+ A G     AVT  G+VY+ G 
Sbjct: 2871 KVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGE 2929

Query: 125  KECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG---TSSGTDGR-- 179
                 +GR+   +S+GT        RQ + L+  V  +  V+  SGG   T+   DG+  
Sbjct: 2930 ---ATNGRLGLGMSSGTV----PIPRQITALSSYVVKK--VAVHSGGRHATALTVDGKVF 2980

Query: 180  --GSGEEGS----------KRRRISLAK------------QTAESSSSG----------- 204
              G G++G           K R I   K             +A  +SSG           
Sbjct: 2981 SWGEGDDGKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYTWGLGEYG 3040

Query: 205  -----DENLSAFPCLVTLNPGVRIATVAAGGR--HTLALSDIGQVWGWGYGGEGQLGLGS 257
                 D      P +V +  G R+  VA G R   TLAL+D G V+ WG G  G+LG G 
Sbjct: 3041 RLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG 3100

Query: 258  RIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITD 317
                 S    IP                   N E    R+ G  V  I CG + S  +T 
Sbjct: 3101 -----SEGCNIP------------------QNIE----RLNGQGVCQIECGAQFSLALTK 3133

Query: 318  AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
            +G + T+G G Y + G GS      P  V  L G +I  VA G  H + ++  G VYA+G
Sbjct: 3134 SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWG 3193

Query: 378  GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
             N  GQ G G       P L+    LE      V+CG+ H+ 
Sbjct: 3194 DNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 3233



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 70/276 (25%), Positives = 123/276 (44%), Gaps = 50/276 (18%)

Query: 225  TVAAGGRHTLALSDIGQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAA 282
            T++AGG         G ++GWG+   GQLG   G+++++     P PC   +    R   
Sbjct: 3857 TLSAGGS--------GTIYGWGHNHRGQLGGIEGAKVKV-----PTPC--EALATLRPVQ 3901

Query: 283  LSRG-----SVNSEGPGF-------------------------RVPGNYVKGIAC--GGR 310
            L  G     +V ++G  +                          +   ++K +A   GG+
Sbjct: 3902 LIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGK 3961

Query: 311  HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
            H   ++  G + ++G    G+ G G+      P  + SL GI++  VAAG  H+ C+++ 
Sbjct: 3962 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAA 4021

Query: 371  GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
            GD+Y +G  ++G+LG    + +  P+L++A     V   +   G   T  + DD  V+ W
Sbjct: 4022 GDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSW 4081

Query: 431  GWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
            G   YG+LG G      +P ++ ++ G     V CG
Sbjct: 4082 GDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECG 4117



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 95/221 (42%), Gaps = 46/221 (20%)

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
           SS DE   A P LV    G+++  VA  +G   TLA+++ GQVW WG G  G+LG G   
Sbjct: 498 SSEDE---AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG--- 551

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITD 317
                                     GS   + P    ++    V  + CG + S  +T 
Sbjct: 552 --------------------------GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTK 585

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
            G + ++G G   + G G+ +    P  +  L G ++  VAAG  H + ++ D +V+++G
Sbjct: 586 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWG 645

Query: 378 GN----QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
            N     F  LG       T P     P L++ H   ++CG
Sbjct: 646 SNDQCQHFDTLGV------TKPEPTAFPGLDSKHIVGIACG 680



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 81/168 (48%), Gaps = 6/168 (3%)

Query: 302  VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVA-- 358
            V  +A G +    +T  G + + G    G+ G G +   +  P  +++L    ++ VA  
Sbjct: 2905 VVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVH 2964

Query: 359  AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
            +G  H   ++ DG V+++G    G+LG         PRL+ A  L+    + ++ G+ H+
Sbjct: 2965 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIQA--LKTKRIRDIAYGSSHS 3022

Query: 419  AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACG 465
            A +   G+++ WG  +YG+LG GD   +  P  V +  G     VACG
Sbjct: 3023 APLTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3070



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 5/73 (6%)

Query: 53   GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
            G  F++A++ S  + TWG  D   LG     S  H   P          ++  A G  HC
Sbjct: 4117 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRRPRQVQGLQGKKVIAIATGSLHC 4173

Query: 111  VAVTEGGEVYTWG 123
            V  TE GEVYTWG
Sbjct: 4174 VCCTEDGEVYTWG 4186


>gi|449447492|ref|XP_004141502.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC1-like [Cucumis sativus]
          Length = 390

 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 105/421 (24%), Positives = 171/421 (40%), Gaps = 61/421 (14%)

Query: 66  LITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWK 125
           +I WGS +D GQ  + + +  E           ++    AG  + +A+TE G+++TWGW 
Sbjct: 7   IIAWGSGED-GQLGLGNNEEREWVCAIKALESQNVCSVVAGSRNSLAITEDGKLFTWGWN 65

Query: 126 ECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEG 185
           +        G L    G   +    Q   L+     ++ +    G      D +G     
Sbjct: 66  Q-------RGTLGHPAGTKSENVPSQVKALSNVKIVQAAIG---GWHCLAVDDQGRAYAW 115

Query: 186 SKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGW 245
                    ++  +  ++G              P + +  VAAGG H++ L+  G VW W
Sbjct: 116 GGNEYGQCGEEPEKKDNTGRPPRRDIAIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTW 175

Query: 246 GYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPG-NYVKG 304
           G                    P P                G +       RV G + V+ 
Sbjct: 176 G-------------------QPWPP---------------GDITQISVPVRVQGLDMVRL 201

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           IA G  H+  + + G L  +G   YGQ G G T     P  V  L G+ +  +AAG WH+
Sbjct: 202 IAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHS 261

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQ--AETLPRLLDAPSLENVHSKSVSCGARHTAVIA 422
             ++ +G+VY +G  + G+LG G +   ++ +P+ +   S E +    +SCG  H+  + 
Sbjct: 262 TALTDNGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLLSGEEI--VQISCGGTHSVAVT 319

Query: 423 DDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRN-----------VACGWWHTLL 471
            DG++F +G   +G+LG G  +    P +V I+   PR            VACG  HTL 
Sbjct: 320 SDGRMFSFGRGDHGRLGYGRKVTTGQPEEVPIDIPPPRGRTENGHWIAKLVACGGRHTLA 379

Query: 472 L 472
           L
Sbjct: 380 L 380



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 109/388 (28%), Positives = 164/388 (42%), Gaps = 58/388 (14%)

Query: 47  RDVCG--GGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           ++VC    G   ++AI++  KL TWG        +    K   +P      +   IV+AA
Sbjct: 38  QNVCSVVAGSRNSLAITEDGKLFTWGWNQRGTLGHPAGTKSENVPSQVKALSNVKIVQAA 97

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
            G  HC+AV + G  Y WG  E    G    +    TG       R+   + ++ +P+  
Sbjct: 98  IGGWHCLAVDDQGRAYAWGGNEYGQCGEEP-EKKDNTGRPP----RRDIAIPQRCAPKLI 152

Query: 165 VSR-SSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRI 223
           V + ++GGT S    R    EG             +    GD    + P  V     VR+
Sbjct: 153 VRQVAAGGTHSVVLTR----EGH-------VWTWGQPWPPGDITQISVPVRVQGLDMVRL 201

Query: 224 ATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAAL 283
             +A G  H LAL + G +W WG    GQLG G   +  S P P+  +            
Sbjct: 202 --IAVGAFHNLALQEDGTLWAWGNNEYGQLGTGD-TQPRSQPIPVQGLS----------- 247

Query: 284 SRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDD--EL 341
                          G  +  IA GG HS  +TD G +  +G G +G+ G G  D   ++
Sbjct: 248 ---------------GLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGRLGFGDNDKSSKM 292

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD----QAETLPRL 397
            P  V  L G +I  ++ G  H++ ++SDG +++FG    G+LG G      Q E +P  
Sbjct: 293 VPQKVQLLSGEEIVQISCGGTHSVAVTSDGRMFSFGRGDHGRLGYGRKVTTGQPEEVPID 352

Query: 398 LDAP--SLENVH--SKSVSCGARHTAVI 421
           +  P    EN H  +K V+CG RHT  +
Sbjct: 353 IPPPRGRTENGHWIAKLVACGGRHTLAL 380


>gi|182416055|ref|YP_001821121.1| cell surface receptor IPT/TIG domain-containing protein [Opitutus
           terrae PB90-1]
 gi|177843269|gb|ACB77521.1| cell surface receptor IPT/TIG domain protein [Opitutus terrae
           PB90-1]
          Length = 1848

 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 118/264 (44%), Gaps = 33/264 (12%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR-IRMVSSPHPIPCIESSYGKD 278
           G  +  +A   RH+LAL+  G V+ WGY   GQLG GS  +    S  P+         D
Sbjct: 171 GKTLVALATSYRHSLALASDGTVYAWGYNANGQLGNGSGGLSTDISKVPVAV-------D 223

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
            +  L+              G  +  IA G  HS  +   G +  +G    GQ G GST 
Sbjct: 224 MTGVLA--------------GKTIIAIATGYEHSLALASDGIVYAWGDNSEGQLGDGSTT 269

Query: 339 DELSPNCVSS---LLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLP 395
           D   P  V     L G  +  +AAG  H++ ++SDG VYA+G N + QLG G     ++P
Sbjct: 270 DSKVPMAVDRTGVLTGKTVVAIAAGRNHSLAVASDGTVYAWGDNYYAQLGDGSLTDSSVP 329

Query: 396 RLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
             +D   L       V+ G RH+   A DG V+ WG N  GQ  +GD I    P+ V++ 
Sbjct: 330 VPVDLTELAGKSVADVAGGDRHSLAQASDGTVYAWGDNTNGQ--MGDTIAHLKPAPVSVT 387

Query: 456 ------GCVPRNVACGWWHTLLLA 473
                 G     VA G +H L LA
Sbjct: 388 GGSALAGKTIVAVAAGGYHNLALA 411



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 107/397 (26%), Positives = 172/397 (43%), Gaps = 62/397 (15%)

Query: 99  SIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTG-LDKDVFERQSSF-LT 156
           ++V  A  + H +A+   G VY WG+          G L  G+G L  D+ +   +  +T
Sbjct: 173 TLVALATSYRHSLALASDGTVYAWGYNAN-------GQLGNGSGGLSTDISKVPVAVDMT 225

Query: 157 EQVSPRSQVSRSSGGTSS---GTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLS 209
             ++ ++ ++ ++G   S    +DG     G   EG          Q  + S++ D  + 
Sbjct: 226 GVLAGKTIIAIATGYEHSLALASDGIVYAWGDNSEG----------QLGDGSTT-DSKVP 274

Query: 210 AFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP 269
                  +  G  +  +AAG  H+LA++  G V+ WG     QLG GS +   S P P+ 
Sbjct: 275 MAVDRTGVLTGKTVVAIAAGRNHSLAVASDGTVYAWGDNYYAQLGDGS-LTDSSVPVPVD 333

Query: 270 CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
             E                        + G  V  +A G RHS      G +  +G    
Sbjct: 334 LTE------------------------LAGKSVADVAGGDRHSLAQASDGTVYAWGDNTN 369

Query: 330 GQCGQGSTDDELSPNCV---SSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLG- 385
           GQ G      + +P  V   S+L G  I  VAAG +H + ++SDG V  +G N  GQLG 
Sbjct: 370 GQMGDTIAHLKPAPVSVTGGSALAGKTIVAVAAGGYHNLALASDGTVCTWGYNYNGQLGN 429

Query: 386 --TGGDQAETLPRLLDAP-SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGD 442
             +G  +  T+P  +++  +L      +V  G  H+  +A DG +  WG+N  GQLG   
Sbjct: 430 NSSGAGEKSTVPIAVNSYGALPGKTIVAVGAGVSHSLALASDGALCTWGFNSQGQLGDNS 489

Query: 443 VIDRNIPSQVTIEGCVPRNV--ACGWWHTLLLA-VPP 476
             +R +P  V+  G + + +   C   ++L LA VPP
Sbjct: 490 TTNRTVPVTVSAGGLMFQALGTTCDAVYSLALATVPP 526



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 94/351 (26%), Positives = 138/351 (39%), Gaps = 58/351 (16%)

Query: 14  VFMWGY-LPGALPQRSPILSPLVVRLPLTVGS----AWRDVCGGGCGF--AMAISDSRKL 66
           V+ WGY   G L   S  LS  + ++P+ V      A + +     G+  ++A++    +
Sbjct: 193 VYAWGYNANGQLGNGSGGLSTDISKVPVAVDMTGVLAGKTIIAIATGYEHSLALASDGIV 252

Query: 67  ITWGSTDD--LGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGW 124
             WG   +  LG    T  K     +   + T  ++V  AAG  H +AV   G VY WG 
Sbjct: 253 YAWGDNSEGQLGDGSTTDSKVPMAVDRTGVLTGKTVVAIAAGRNHSLAVASDGTVYAWG- 311

Query: 125 KECVPSGRVFGDLSTGTGLDK------DVFERQSSFLTEQVS-PRSQVSRSSGGTSSGTD 177
                    +  L  G+  D       D+ E     + +     R  ++++S GT     
Sbjct: 312 ------DNYYAQLGDGSLTDSSVPVPVDLTELAGKSVADVAGGDRHSLAQASDGTVYAWG 365

Query: 178 GRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS 237
              +G+ G     +    + A  S +G   L+          G  I  VAAGG H LAL+
Sbjct: 366 DNTNGQMGDTIAHL----KPAPVSVTGGSALA----------GKTIVAVAAGGYHNLALA 411

Query: 238 DIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRV 297
             G V  WGY   GQLG  S      S  PI                  +VNS G    +
Sbjct: 412 SDGTVCTWGYNYNGQLGNNSSGAGEKSTVPI------------------AVNSYG---AL 450

Query: 298 PGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS 348
           PG  +  +  G  HS  +   GAL T+G+   GQ G  ST +   P  VS+
Sbjct: 451 PGKTIVAVGAGVSHSLALASDGALCTWGFNSQGQLGDNSTTNRTVPVTVSA 501


>gi|330797026|ref|XP_003286564.1| hypothetical protein DICPUDRAFT_77429 [Dictyostelium purpureum]
 gi|325083469|gb|EGC36921.1| hypothetical protein DICPUDRAFT_77429 [Dictyostelium purpureum]
          Length = 1440

 Score =  108 bits (271), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 83/272 (30%), Positives = 128/272 (47%), Gaps = 52/272 (19%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
           R+ +V+ G  HTL L+   +++  G+   GQLG+ +   +V S  P+P            
Sbjct: 75  RVVSVSCGFNHTLLLTSEYKIFSMGFNQVGQLGIEN---VVDSAVPLPV----------D 121

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL 341
            L +              N +K I  G   SA ITD G L  +G   +GQ G G  + + 
Sbjct: 122 TLQKC-------------NVIK-IKAGNNISAAITDKGDLYIWGTSSFGQLGNGKMNPKS 167

Query: 342 SPNCVSSLL---------------GIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
           +    +++L                IQ   V  G  HTI +S+ G ++++G NQ+GQLG 
Sbjct: 168 NQFIPTTILEPFISEQEKDNPIYQNIQYSNVCFGAQHTIAVSTTGTIFSWGSNQYGQLGL 227

Query: 387 GGDQAETLPRLLDAPSLENVHSK----SVSCGARHTAVIADDGKVFCWGWNKYGQLGLGD 442
           G    + +P     P   N HS      ++ G  H++++  +G V+ WG N+YGQLG GD
Sbjct: 228 GHCNTKLVP----VPVRFNRHSTRIVVDIASGNFHSSLLTLEGDVYLWGSNQYGQLGQGD 283

Query: 443 VIDRNIPSQV--TIEGCVPRNVACGWWHTLLL 472
            ID N+P +V  +IE      +A G  HT+LL
Sbjct: 284 TIDLNVPKKVKGSIEFKKINRMALGNNHTILL 315



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 16/189 (8%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V  ++CG  H+ ++T    + + G+   GQ G  +  D   P  V +L    +  + AG 
Sbjct: 76  VVSVSCGFNHTLLLTSEYKIFSMGFNQVGQLGIENVVDSAVPLPVDTLQKCNVIKIKAGN 135

Query: 362 WHTICISSDGDVYAFGGNQFGQLGTGGDQAET---LPRLL----------DAPSLENVHS 408
             +  I+  GD+Y +G + FGQLG G    ++   +P  +          D P  +N+  
Sbjct: 136 NISAAITDKGDLYIWGTSSFGQLGNGKMNPKSNQFIPTTILEPFISEQEKDNPIYQNIQY 195

Query: 409 KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPR---NVACG 465
            +V  GA+HT  ++  G +F WG N+YGQLGLG    + +P  V       R   ++A G
Sbjct: 196 SNVCFGAQHTIAVSTTGTIFSWGSNQYGQLGLGHCNTKLVPVPVRFNRHSTRIVVDIASG 255

Query: 466 WWHTLLLAV 474
            +H+ LL +
Sbjct: 256 NFHSSLLTL 264



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 68/252 (26%), Positives = 116/252 (46%), Gaps = 25/252 (9%)

Query: 204 GDENL--SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           G EN+  SA P  V       +  + AG   + A++D G ++ WG    GQLG G     
Sbjct: 107 GIENVVDSAVPLPVDTLQKCNVIKIKAGNNISAAITDKGDLYIWGTSSFGQLGNGKMNPK 166

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIAC-GGRHSAVITDAGA 320
            +   P   +E    +             + P ++   N      C G +H+  ++  G 
Sbjct: 167 SNQFIPTTILEPFISEQE----------KDNPIYQ---NIQYSNVCFGAQHTIAVSTTGT 213

Query: 321 LLTFGWGLYGQCGQGSTDDELSP-----NCVSSLLGIQIEGVAAGLWHTICISSDGDVYA 375
           + ++G   YGQ G G  + +L P     N  S+ + + I   A+G +H+  ++ +GDVY 
Sbjct: 214 IFSWGSNQYGQLGLGHCNTKLVPVPVRFNRHSTRIVVDI---ASGNFHSSLLTLEGDVYL 270

Query: 376 FGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKY 435
           +G NQ+GQLG G      +P+ +   S+E      ++ G  HT ++  D  V+ +G N++
Sbjct: 271 WGSNQYGQLGQGDTIDLNVPKKVKG-SIEFKKINRMALGNNHTILLTKDQDVYTFGNNEF 329

Query: 436 GQLGLGDVIDRN 447
            QLG G +  +N
Sbjct: 330 YQLGHGSMGGKN 341



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 63/188 (33%), Positives = 87/188 (46%), Gaps = 31/188 (16%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLG-SRIRMVSSPHPIPCIESSYGKDR 279
           ++ + V  G +HT+A+S  G ++ WG    GQLGLG    ++V    P+P          
Sbjct: 193 IQYSNVCFGAQHTIAVSTTGTIFSWGSNQYGQLGLGHCNTKLV----PVP---------- 238

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDD 339
               +R S              V  IA G  HS+++T  G +  +G   YGQ GQG T D
Sbjct: 239 -VRFNRHSTR-----------IVVDIASGNFHSSLLTLEGDVYLWGSNQYGQLGQGDTID 286

Query: 340 ELSPNCVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLG---TGGDQAETLP 395
              P  V  S+   +I  +A G  HTI ++ D DVY FG N+F QLG    GG      P
Sbjct: 287 LNVPKKVKGSIEFKKINRMALGNNHTILLTKDQDVYTFGNNEFYQLGHGSMGGKNKIYFP 346

Query: 396 RLLDAPSL 403
            L+  P L
Sbjct: 347 TLIQKPRL 354


>gi|147899463|ref|NP_001085604.1| HECT and RLD domain containing E3 ubiquitin protein ligase 3
           [Xenopus laevis]
 gi|49256123|gb|AAH73004.1| MGC82587 protein [Xenopus laevis]
          Length = 1050

 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 92/294 (31%), Positives = 135/294 (45%), Gaps = 34/294 (11%)

Query: 206 ENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSP 265
           +N  + PC  T +    +  VA GG+HTL L + GQV+  G+ GEGQLG        + P
Sbjct: 19  KNAVSEPCACTFSLATCVKEVACGGKHTLFLMEDGQVYSCGWNGEGQLGHSHE---GTHP 75

Query: 266 HPIPCIESSY------GKDRSAALS-RGSVNSEGPGF-------------RVP------- 298
            P+  +   +      G+  S ALS +G++ S G G              R+P       
Sbjct: 76  APVATLAEEHIKHIACGQSHSLALSLQGNLYSWGAGNDGQLGHATVEHYSRIPRIIKKLS 135

Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGS-TDDELSPNCVSSLLGIQIEGV 357
              ++ ++CG  H   + D G L T+G   +GQ G G+    + SP  V SL GI +  V
Sbjct: 136 QQKIQQMSCGDDHCLALGDDGQLFTWGQNTHGQLGLGNGFISQSSPQKVKSLEGIPLAQV 195

Query: 358 AAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARH 417
            AG  H+  +S  G V+ +G N  GQLG   +Q +  P       L       +SCG  H
Sbjct: 196 TAGGSHSFALSLSGAVFGWGKNSAGQLGLNDEQVKETP--CHVKPLRTHKVVYISCGEEH 253

Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
           TA++   G +F +G    GQLG   + +   P +V  + G     +ACG  HTL
Sbjct: 254 TAILTKAGGLFTFGAGGSGQLGHDSLHNEINPRRVLELMGSEVSQIACGRKHTL 307



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 77/220 (35%), Positives = 107/220 (48%), Gaps = 27/220 (12%)

Query: 206 ENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSP 265
           E+ S  P ++      +I  ++ G  H LAL D GQ++ WG    GQLGLG+     SSP
Sbjct: 122 EHYSRIPRIIKKLSQQKIQQMSCGDDHCLALGDDGQLFTWGQNTHGQLGLGNGFISQSSP 181

Query: 266 HP------IPCIESSYGKDRSAALS-RGSV-----NS------------EGPGFRVP--G 299
                   IP  + + G   S ALS  G+V     NS            E P    P   
Sbjct: 182 QKVKSLEGIPLAQVTAGGSHSFALSLSGAVFGWGKNSAGQLGLNDEQVKETPCHVKPLRT 241

Query: 300 NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAA 359
           + V  I+CG  H+A++T AG L TFG G  GQ G  S  +E++P  V  L+G ++  +A 
Sbjct: 242 HKVVYISCGEEHTAILTKAGGLFTFGAGGSGQLGHDSLHNEINPRRVLELMGSEVSQIAC 301

Query: 360 GLWHTIC-ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           G  HT+  + S G +YAFG    GQLGTG +     P ++
Sbjct: 302 GRKHTLAFVPSSGTLYAFGCGDLGQLGTGHENNVKCPTVV 341



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 113/233 (48%), Gaps = 32/233 (13%)

Query: 245 WGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKG 304
           WG+   GQLG G  ++   S    PC         +   S  +              VK 
Sbjct: 4   WGHSAFGQLGNGHSLKNAVSE---PC---------ACTFSLATC-------------VKE 38

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           +ACGG+H+  + + G + + GW   GQ G        +P  V++L    I+ +A G  H+
Sbjct: 39  VACGGKHTLFLMEDGQVYSCGWNGEGQLGHSHEGTHPAP--VATLAEEHIKHIACGQSHS 96

Query: 365 ICISSDGDVYAFGGNQFGQLGTGG-DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
           + +S  G++Y++G    GQLG    +    +PR++   S + +  + +SCG  H   + D
Sbjct: 97  LALSLQGNLYSWGAGNDGQLGHATVEHYSRIPRIIKKLSQQKI--QQMSCGDDHCLALGD 154

Query: 424 DGKVFCWGWNKYGQLGLGD-VIDRNIPSQV-TIEGCVPRNVACGWWHTLLLAV 474
           DG++F WG N +GQLGLG+  I ++ P +V ++EG     V  G  H+  L++
Sbjct: 155 DGQLFTWGQNTHGQLGLGNGFISQSSPQKVKSLEGIPLAQVTAGGSHSFALSL 207



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/303 (24%), Positives = 118/303 (38%), Gaps = 60/303 (19%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
           G   ++A+S    L +WG+ +D    + T   +  IP      ++  I + + G  HC+A
Sbjct: 92  GQSHSLALSLQGNLYSWGAGNDGQLGHATVEHYSRIPRIIKKLSQQKIQQMSCGDDHCLA 151

Query: 113 VTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGT 172
           + + G+++TWG           G L  G G               Q SP+   S      
Sbjct: 152 LGDDGQLFTWG-------QNTHGQLGLGNG------------FISQSSPQKVKSLEGIPL 192

Query: 173 SSGTDGRGSGEEGSKRRRISLA-------KQTAESSSSGDENLSAFPCLVTLNPGVRIAT 225
           +  T G      GS    +SL+       K +A      DE +   PC V      ++  
Sbjct: 193 AQVTAG------GSHSFALSLSGAVFGWGKNSAGQLGLNDEQVKETPCHVKPLRTHKVVY 246

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
           ++ G  HT  L+  G ++ +G GG GQLG  S   + +  +P   +E             
Sbjct: 247 ISCGEEHTAILTKAGGLFTFGAGGSGQLGHDS---LHNEINPRRVLE------------- 290

Query: 286 GSVNSEGPGFRVPGNYVKGIACGGRHS-AVITDAGALLTFGWGLYGQCGQGSTDDELSPN 344
                      + G+ V  IACG +H+ A +  +G L  FG G  GQ G G  ++   P 
Sbjct: 291 -----------LMGSEVSQIACGRKHTLAFVPSSGTLYAFGCGDLGQLGTGHENNVKCPT 339

Query: 345 CVS 347
            V 
Sbjct: 340 VVK 342


>gi|345323388|ref|XP_001508293.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4
           [Ornithorhynchus anatinus]
          Length = 1006

 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 89/260 (34%), Positives = 119/260 (45%), Gaps = 34/260 (13%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS-----RI-RMVSSPHPIPCIESSYG 276
           I  V+ G  HTLAL+D GQV+ WG   +GQLGL       R+ R + S   I  ++ S G
Sbjct: 35  IVAVSCGDAHTLALNDKGQVYAWGLDTDGQLGLPGTEECIRVPRNIKSLSDIQIVQVSCG 94

Query: 277 KDRSAALSRGS---------VNSEGPGFRVP------------GNYVKGIACGGRHSAVI 315
              S ALS+GS             G GF               G     IA GG HS V+
Sbjct: 95  YYHSLALSKGSEVFSWGQNKYGQLGLGFEFKKQTSPQLIKSLLGIPFMQIAAGGAHSFVL 154

Query: 316 TDAGALLTFGWGL--YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDV 373
           T +GA+  FGWG   +GQ G    +D   PN + SL   +I  +  G  HT  ++ +G V
Sbjct: 155 TLSGAI--FGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 212

Query: 374 YAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGW 432
           + FG   +GQLG      E  PR      L       V+CG +HT A +   G+++ +G 
Sbjct: 213 FTFGAGGYGQLGHNSTSHEINPR--KVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGL 270

Query: 433 NKYGQLGLGDVIDRNIPSQV 452
              GQLG G   +R  P  V
Sbjct: 271 GGNGQLGTGSTSNRKSPFTV 290



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 76/305 (24%), Positives = 128/305 (41%), Gaps = 50/305 (16%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D       + +   +P      ++  IV+ +
Sbjct: 33  QNIVAVSCGDAHTLALNDKGQVYAWGLDTDGQLGLPGTEECIRVPRNIKSLSDIQIVQVS 92

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSS-FLTEQVSPRS 163
            G+ H +A+++G EV++WG  +       +G L  G G +   F++Q+S  L + +    
Sbjct: 93  CGYYHSLALSKGSEVFSWGQNK-------YGQL--GLGFE---FKKQTSPQLIKSLLGIP 140

Query: 164 QVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRI 223
            +  ++GG  S          G  R +              DEN    P L+      +I
Sbjct: 141 FMQIAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRSQKI 193

Query: 224 ATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAAL 283
             +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +               
Sbjct: 194 VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV--------------- 237

Query: 284 SRGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                      F + G+ V  +ACG +H SA +  +G + +FG G  GQ G GST +  S
Sbjct: 238 -----------FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKS 286

Query: 343 PNCVS 347
           P  V 
Sbjct: 287 PFTVK 291



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 8/69 (11%)

Query: 410 SVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDV-----IDRNIPSQVTIEGCVPRNVAC 464
           +VSCG  HT  + D G+V+ WG +  GQLGL        + RNI S   I+      V+C
Sbjct: 37  AVSCGDAHTLALNDKGQVYAWGLDTDGQLGLPGTEECIRVPRNIKSLSDIQIV---QVSC 93

Query: 465 GWWHTLLLA 473
           G++H+L L+
Sbjct: 94  GYYHSLALS 102


>gi|301113129|ref|XP_002998335.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262112629|gb|EEY70681.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 2353

 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 91/311 (29%), Positives = 144/311 (46%), Gaps = 53/311 (17%)

Query: 207 NLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR-------- 258
           +LS  P    ++ G   A    G  HT+ +S  G+V   GY   GQLG G+         
Sbjct: 637 HLSEIP---KMDSGSSQAHAYNGCEHTILVSTDGRVATCGYNYRGQLGHGNTTSESVPKI 693

Query: 259 --------IRMVSSP--HPIPCIES-------SYGKDRSAAL-SRGSVNSEGPGF--RVP 298
                   +R+VS    H +   E        ++G++    L    S++ + P F   + 
Sbjct: 694 IRSLENKIVRLVSCSYYHTVLACEDGNLQNLYTFGRNDYGQLGHNDSIDRKIPQFVEALS 753

Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ--IEG 356
              +  +ACG  H+ V+T +G    FG   YGQ G  + +++L+P  V   L  Q  +E 
Sbjct: 754 DQQIVSVACGQYHTMVVTASGKAFAFGKNDYGQLGIDTMENQLAPVQVRGGLERQECLE- 812

Query: 357 VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL------------PRLLDAPSLE 404
           +  G +HTI + S   ++AFG N +GQLG G   A +              RL+D   LE
Sbjct: 813 IRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRSNASSTSNLQLQQQRFSNARLID--ELE 870

Query: 405 NVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRN--- 461
                 ++CG  HT  ++D+G ++ +G N +GQLG GD  +R  P    I+  V +    
Sbjct: 871 GKDIVRIACGCYHTIAVSDNGVMYVFGRNNHGQLGTGDTTERVYP--FPIDDFVGKRVAL 928

Query: 462 VACGWWHTLLL 472
           VA G++HT++L
Sbjct: 929 VAAGFYHTVVL 939



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 83/291 (28%), Positives = 122/291 (41%), Gaps = 45/291 (15%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES--------- 273
           I  + AG  HT+ L+  G+V+  GY   GQ G G   R VS    IP ++S         
Sbjct: 597 IIQIGAGNEHTVVLTADGKVFTCGYNDNGQCGQGGTAR-VSHLSEIPKMDSGSSQAHAYN 655

Query: 274 ---------------SYGKDRSAALSRGSVNSEG-PGF--RVPGNYVKGIACGGRHSAVI 315
                          + G +    L  G+  SE  P     +    V+ ++C   H+ + 
Sbjct: 656 GCEHTILVSTDGRVATCGYNYRGQLGHGNTTSESVPKIIRSLENKIVRLVSCSYYHTVLA 715

Query: 316 TDAGAL---LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGD 372
            + G L    TFG   YGQ G   + D   P  V +L   QI  VA G +HT+ +++ G 
Sbjct: 716 CEDGNLQNLYTFGRNDYGQLGHNDSIDRKIPQFVEALSDQQIVSVACGQYHTMVVTASGK 775

Query: 373 VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGW 432
            +AFG N +GQLG    + +  P  +    LE      + CG  HT  +     +F +G 
Sbjct: 776 AFAFGKNDYGQLGIDTMENQLAPVQVRG-GLERQECLEIRCGYYHTIALCSGAHLFAFGR 834

Query: 433 NKYGQLGLG-----DVIDRNIPSQV--------TIEGCVPRNVACGWWHTL 470
           N YGQLGLG        +  +  Q          +EG     +ACG +HT+
Sbjct: 835 NDYGQLGLGRSNASSTSNLQLQQQRFSNARLIDELEGKDIVRIACGCYHTI 885



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 81/149 (54%), Gaps = 4/149 (2%)

Query: 325 GWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQL 384
           G   YG+ G G T    S   + +L   +I  + AG  HT+ +++DG V+  G N  GQ 
Sbjct: 568 GQNSYGELGHGDTASRKSFERIQALQQKEIIQIGAGNEHTVVLTADGKVFTCGYNDNGQC 627

Query: 385 GTGGDQAETLPRLLDAPSLENVHSKSVSC-GARHTAVIADDGKVFCWGWNKYGQLGLGDV 443
           G GG     +  L + P +++  S++ +  G  HT +++ DG+V   G+N  GQLG G+ 
Sbjct: 628 GQGG--TARVSHLSEIPKMDSGSSQAHAYNGCEHTILVSTDGRVATCGYNYRGQLGHGNT 685

Query: 444 IDRNIPSQV-TIEGCVPRNVACGWWHTLL 471
              ++P  + ++E  + R V+C ++HT+L
Sbjct: 686 TSESVPKIIRSLENKIVRLVSCSYYHTVL 714



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 65/150 (43%), Gaps = 29/150 (19%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
           +  G  HT+AL     ++ +G    GQLGLG                      RS A S 
Sbjct: 813 IRCGYYHTIALCSGAHLFAFGRNDYGQLGLG----------------------RSNASST 850

Query: 286 GSVNSEGPGF-------RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
            ++  +   F        + G  +  IACG  H+  ++D G +  FG   +GQ G G T 
Sbjct: 851 SNLQLQQQRFSNARLIDELEGKDIVRIACGCYHTIAVSDNGVMYVFGRNNHGQLGTGDTT 910

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICIS 368
           + + P  +   +G ++  VAAG +HT+ ++
Sbjct: 911 ERVYPFPIDDFVGKRVALVAAGFYHTVVLT 940


>gi|338723782|ref|XP_001915115.2| PREDICTED: LOW QUALITY PROTEIN: e3 ISG15--protein ligase HERC5
           [Equus caballus]
          Length = 966

 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 81/270 (30%), Positives = 125/270 (46%), Gaps = 37/270 (13%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHP--------IPCIESS 274
           I  +  G  H+LALS  G+++ WG    GQLG+G      S+P P        +P ++ S
Sbjct: 84  IIQITCGDYHSLALSKGGELFAWGQNTYGQLGVGRT--FASTPTPQIVEHLSGVPLVQIS 141

Query: 275 YGKDRSAALSRG------------------SVNSEGPGF--RVPGNYVKGIACGGRHSAV 314
            G+  S ALS                    + N + P     +    V+ +ACGG H+A+
Sbjct: 142 AGEAHSMALSMSRNVYSWGRNDCGQLGLGHTNNKDSPSLIEALDNQEVEFLACGGSHTAL 201

Query: 315 ITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD-GDV 373
           +T  G + TFG G  GQ G  ST +EL+P  V+ L+G ++  +A G  HT+   SD G V
Sbjct: 202 LTKDGLVFTFGAGKCGQLGHNSTQNELTPCLVTELVGKRVTQIACGRRHTLAYVSDLGKV 261

Query: 374 YAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWN 433
           ++FG  + GQLG G    + +P  +  PS E +  +S +       +   +  +  W   
Sbjct: 262 FSFGSGEGGQLGNGATHHQLIPLPMKLPSNEELKFESHTSEKELIMIAGGNQSILLWMEK 321

Query: 434 KYGQLGLGDVIDRNIPSQVTIEGCVPRNVA 463
           +   + L     R IP+    EG V R +A
Sbjct: 322 ENPYVNLR----RKIPT--LNEGTVKRWIA 345



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/168 (36%), Positives = 88/168 (52%), Gaps = 4/168 (2%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL-SPNCVSSLLGIQIEGVAAGLWH 363
           I CG  HS  ++  G L  +G   YGQ G G T     +P  V  L G+ +  ++AG  H
Sbjct: 87  ITCGDYHSLALSKGGELFAWGQNTYGQLGVGRTFASTPTPQIVEHLSGVPLVQISAGEAH 146

Query: 364 TICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
           ++ +S   +VY++G N  GQLG G    +  P L++A  L+N   + ++CG  HTA++  
Sbjct: 147 SMALSMSRNVYSWGRNDCGQLGLGHTNNKDSPSLIEA--LDNQEVEFLACGGSHTALLTK 204

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
           DG VF +G  K GQLG     +   P  VT + G     +ACG  HTL
Sbjct: 205 DGLVFTFGAGKCGQLGHNSTQNELTPCLVTELVGKRVTQIACGRRHTL 252



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 96/250 (38%), Gaps = 50/250 (20%)

Query: 97  EASIVKAAAGWAHCVAVTEGGEVYTWGWKEC--VPSGRVFGDLSTGTGLDKDVFERQSSF 154
           E +I++   G  H +A+++GGE++ WG      +  GR F    T               
Sbjct: 81  EKNIIQITCGDYHSLALSKGGELFAWGQNTYGQLGVGRTFASTPTPQ------------- 127

Query: 155 LTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCL 214
           + E +S    V  S+G   S             R   S  +        G  N    P L
Sbjct: 128 IVEHLSGVPLVQISAGEAHSMALSMS-------RNVYSWGRNDCGQLGLGHTNNKDSPSL 180

Query: 215 VTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESS 274
           +       +  +A GG HT  L+  G V+ +G G  GQLG  S    ++     PC+ + 
Sbjct: 181 IEALDNQEVEFLACGGSHTALLTKDGLVFTFGAGKCGQLGHNSTQNELT-----PCLVTE 235

Query: 275 YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHS-AVITDAGALLTFGWGLYGQCG 333
                                 + G  V  IACG RH+ A ++D G + +FG G  GQ G
Sbjct: 236 ----------------------LVGKRVTQIACGRRHTLAYVSDLGKVFSFGSGEGGQLG 273

Query: 334 QGSTDDELSP 343
            G+T  +L P
Sbjct: 274 NGATHHQLIP 283



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 73/179 (40%), Gaps = 44/179 (24%)

Query: 337 TDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD-------------------------- 370
           +D    P C+     ++I  +  G  H + +SSD                          
Sbjct: 27  SDGTRKPKCIKLGRKMKIHSMDQGAEHLLVLSSDGKPFEYNYSIEHARFQCVLQEKNIIQ 86

Query: 371 --------------GDVYAFGGNQFGQLGTGGDQAET-LPRLLDAPSLENVHSKSVSCGA 415
                         G+++A+G N +GQLG G   A T  P++++   L  V    +S G 
Sbjct: 87  ITCGDYHSLALSKGGELFAWGQNTYGQLGVGRTFASTPTPQIVE--HLSGVPLVQISAGE 144

Query: 416 RHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLA 473
            H+  ++    V+ WG N  GQLGLG   +++ PS +  ++      +ACG  HT LL 
Sbjct: 145 AHSMALSMSRNVYSWGRNDCGQLGLGHTNNKDSPSLIEALDNQEVEFLACGGSHTALLT 203


>gi|145597074|ref|YP_001161371.1| hypothetical protein Strop_4565 [Salinispora tropica CNB-440]
 gi|145306411|gb|ABP56993.1| hypothetical protein Strop_4565 [Salinispora tropica CNB-440]
          Length = 477

 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 110/425 (25%), Positives = 162/425 (38%), Gaps = 70/425 (16%)

Query: 63  SRKLITWGSTDD--LGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVY 120
           S  ++ WG   D  LG    T       P    LP   +I   AAG  H +AVT  G   
Sbjct: 71  SDTVLAWGDNKDGELGDGTTTDSS---TPIAVDLPAGTTITAIAAGHDHSLAVTSAGTAL 127

Query: 121 TWGWKECVPSGRVFGDLSTGTGLDKDV-----FERQSSFLTEQVSPRSQVSRSSGGTSS- 174
            WG         +FG L  G+  D            ++           ++ +S GT+  
Sbjct: 128 AWG-------NNLFGQLGDGSTTDSSTPIAVDLPAGTTVTAIAAGDDHSLAVTSAGTALA 180

Query: 175 -GTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHT 233
            G + RG   +G+  RR +                   P  V L  G  +  +AAG  H+
Sbjct: 181 WGDNDRGELGDGTTTRRDT-------------------PVDVDLPAGTTVTAIAAGIGHS 221

Query: 234 LALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGP 293
           LAL+  G V  WG   +GQLG G+      S  PI                         
Sbjct: 222 LALTSAGTVLTWGLNSDGQLGDGT---TTDSSTPI------------------------- 253

Query: 294 GFRVP-GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGI 352
              +P G  V  IA G  HS  +T AG +L +G    GQ G G+T +  +P  V+     
Sbjct: 254 AVDLPAGTTVTAIAAGSLHSLAVTTAGTILAWGNNSDGQLGDGTTTNSSTPIAVNLPAST 313

Query: 353 QIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVS 412
            I  +  G  H++ ++S G   A+G N  GQLG G     + P  ++ P+       + +
Sbjct: 314 TITAIDGGRDHSLAVTSAGSALAWGDNDDGQLGDGTTTNSSTPIAVNLPADTT--VTATT 371

Query: 413 CGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACGWWHTLL 471
            G+ H+  +   G +  WG N  G+LG G   + + P  V +           G  H++ 
Sbjct: 372 AGSLHSLAVTTAGTILAWGNNSDGRLGDGTTTNSSTPIAVNLPADTTVTATTAGSAHSMA 431

Query: 472 LAVPP 476
           L  PP
Sbjct: 432 LVAPP 436



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 78/328 (23%), Positives = 123/328 (37%), Gaps = 74/328 (22%)

Query: 32  SPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIP 89
           +P+ V LP   G+    +  G    ++A++ +   + WG  D  +LG    T     + P
Sbjct: 147 TPIAVDLP--AGTTVTAIAAGD-DHSLAVTSAGTALAWGDNDRGELGDGTTT---RRDTP 200

Query: 90  EPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFE 149
               LP   ++   AAG  H +A+T  G V TWG           G L  GT  D     
Sbjct: 201 VDVDLPAGTTVTAIAAGIGHSLALTSAGTVLTWGLNS-------DGQLGDGTTTDS---- 249

Query: 150 RQSSFLTEQVSPRSQVSRSSGG-------TSSGTD-GRGSGEEGSKRRRISLAKQTAESS 201
             S+ +   +   + V+  + G       T++GT    G+  +G       L   T  +S
Sbjct: 250 --STPIAVDLPAGTTVTAIAAGSLHSLAVTTAGTILAWGNNSDG------QLGDGTTTNS 301

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           S+        P  V L     I  +  G  H+LA++  G    WG   +GQLG G+    
Sbjct: 302 ST--------PIAVNLPASTTITAIDGGRDHSLAVTSAGSALAWGDNDDGQLGDGT---- 349

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGP-GFRVPGNYVKGIACGGR-HSAVITDAG 319
                                    + NS  P    +P +        G  HS  +T AG
Sbjct: 350 -------------------------TTNSSTPIAVNLPADTTVTATTAGSLHSLAVTTAG 384

Query: 320 ALLTFGWGLYGQCGQGSTDDELSPNCVS 347
            +L +G    G+ G G+T +  +P  V+
Sbjct: 385 TILAWGNNSDGRLGDGTTTNSSTPIAVN 412


>gi|440907021|gb|ELR57214.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Bos grunniens
            mutus]
          Length = 4874

 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 130/308 (42%), Gaps = 89/308 (28%)

Query: 232  HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
            H++AL++ G+V+ WG G  G+LG G+  R    P  I  ++                   
Sbjct: 4095 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQ------------------- 4134

Query: 292  GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                   G  V  ++CG +HSAV+T  G L TFG G YG+ G G+T ++  P  V++L G
Sbjct: 4135 -------GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4187

Query: 352  IQI----------EGVAAGLWHTICISSDGD-VYAFGGNQFGQLGTGGDQAETLPRLLDA 400
             QI            VA GL HT+ +S+DG  V+AFG   +G+LG G   A++ P+ +D 
Sbjct: 4188 YQIGQARNNTLFFLQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDV 4247

Query: 401  --------------------------------------------------PSLENVHSKS 410
                                                              P L  V  + 
Sbjct: 4248 LCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIED 4307

Query: 411  VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACGWWHT 469
            V+ GA HT  +A  G V+ WG N  GQLGLG       P+ VT+ +G   R ++ G  H+
Sbjct: 4308 VAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHS 4367

Query: 470  LLLAVPPT 477
                 PP 
Sbjct: 4368 AAWTAPPV 4375



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 114/243 (46%), Gaps = 46/243 (18%)

Query: 242  VWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNY 301
            V+ WG G  GQL    R  MV +                            P F    + 
Sbjct: 4001 VYLWGAGRHGQLAEAGRNVMVPAA--------------------------APSF----SQ 4030

Query: 302  VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
             + + CG   + VI   G +L  G G YG+ GQG++DD      +S+L G  +  +    
Sbjct: 4031 AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSC 4090

Query: 362  W---HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
                H++ ++  G+V+++G   +G+LG G    +  PR ++A   E V    +SCG +H+
Sbjct: 4091 GSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEV--VQMSCGFKHS 4148

Query: 419  AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGC---VPRN-------VACGWW 467
            AV+  DGK+F +G   YG+LGLG+  ++ +P +VT +EG      RN       VACG  
Sbjct: 4149 AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNNTLFFLQVACGLN 4208

Query: 468  HTL 470
            HTL
Sbjct: 4209 HTL 4211



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 108/393 (27%), Positives = 161/393 (40%), Gaps = 65/393 (16%)

Query: 41   TVGSAWRDVCGGGCGFAMAISD--------SRKLITWGSTDDLGQSYVTSGKHGEIPEPF 92
            +   A + +CG  C F +  +         S   +  G++DDL    V S   G +    
Sbjct: 4027 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVV--- 4083

Query: 93   PLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQS 152
                   +V +     H +A+TE GEV++WG  +       +G L  G   D+    RQ 
Sbjct: 4084 -----TQLVTSCGSDGHSMALTESGEVFSWGDGD-------YGKLGHGNS-DRQRRPRQI 4130

Query: 153  SFLT-EQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDEN 207
              L  E+V   S   + S   +S  DG+    G+G+ G    R+ L   + +        
Sbjct: 4131 EALQGEEVVQMSCGFKHSAVVTS--DGKLFTFGNGDYG----RLGLGNTSNKKLPERVTA 4184

Query: 208  LSAFPCLVTLNPGVRIATVAAGGRHTLALS-DIGQVWGWGYGGEGQLGLGSRIRMVSSPH 266
            L  +      N  +    VA G  HTLA+S D   VW +G G  G+LGLG+     SSP 
Sbjct: 4185 LEGYQIGQARNNTLFFLQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK-SSPQ 4243

Query: 267  PIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGW 326
             +  +                           G  +K +ACG + S  +T  G + TFG 
Sbjct: 4244 KVDVL--------------------------CGIGIKKVACGTQFSVALTKDGHVYTFGQ 4277

Query: 327  GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
                   +G   +   P  +  L G+ IE VA G  HT+ ++S GDVYA+G N  GQLG 
Sbjct: 4278 DRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL 4337

Query: 387  GGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            G       P L+     +NV  + +S G  H+A
Sbjct: 4338 GHTNHVREPTLVTVLQGKNV--RQISAGRCHSA 4368



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 95/174 (54%), Gaps = 5/174 (2%)

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
           + I  G   + VI+  G++   G G YG+ G G ++++ +   ++      I+ V++   
Sbjct: 404 QTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKG 463

Query: 363 ---HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
              HT+  +++G+V+++G   +G+LG G    +  P+L+  P L+      VS G RH+A
Sbjct: 464 SDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCVSAGYRHSA 522

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
            + +DG+++ WG   +G+LG GD   RNIP+ V     V   V+CG  HT+ L+
Sbjct: 523 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG-EVSCGSSHTIALS 575



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 132/298 (44%), Gaps = 35/298 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAG---GRHTLALSDIGQVWGWGYGGEGQLGLGSRI- 259
           GD N  +    +T  P   I  V++      HTLA +  G+V+ WG G  G+LG G+   
Sbjct: 436 GDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSST 495

Query: 260 ----RMVSSP---HPIPCIESSY---------------GKDRSAALSRGSVNSEG-PGFR 296
               +++  P     + C+ + Y               G+     L  G  NS   P   
Sbjct: 496 QKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 555

Query: 297 VPGNYVKGIACGGRHSAVITDAGALL-TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
              + V  ++CG  H+  ++  G  + +FG G  G+ G G T+    P  + +L G+ I 
Sbjct: 556 KDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIR 615

Query: 356 GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL-PRLLDAPSLENVHSKSVSCG 414
            V AG   ++ ++S G VYA+G      LG G  +A  L P+L++   L       +S G
Sbjct: 616 KVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE--ELAATRIVDISIG 671

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVI-DRNIPSQVT-IEGCVPRNVACGWWHTL 470
             H   ++ D +V+ WG N  GQ G G+       P +V+ ++G   + ++ G  H+L
Sbjct: 672 DSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSL 729



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 112/251 (44%), Gaps = 31/251 (12%)

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
           T+ AG   T  +S  G V   G G  G+LGLG       S +     + ++   RS    
Sbjct: 405 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLG------DSNNQSTLKKLTFEPHRSIKKV 458

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN 344
             S  S+G                  H+   T  G + ++G G YG+ G G++  +  P 
Sbjct: 459 SSSKGSDG------------------HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPK 500

Query: 345 CVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSL 403
            +   L G  +  V+AG  H+  ++ DG++Y +G   FG+LG G   +  +P L+    +
Sbjct: 501 LIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK--DI 558

Query: 404 ENVHSKSVSCGARHTAVIADDGK-VFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRN 461
            NV    VSCG+ HT  ++ DG+ V+ +G    G+LG GD      P  +  ++G   R 
Sbjct: 559 SNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK 616

Query: 462 VACGWWHTLLL 472
           V  G   +L L
Sbjct: 617 VCAGSQSSLAL 627



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 130/324 (40%), Gaps = 67/324 (20%)

Query: 52  GGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVK-AAAGWA 108
           G  G  +A +   ++ +WG  D   LG    ++ K+   P+    P +  +V   +AG+ 
Sbjct: 463 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY---PKLIQGPLQGKVVVCVSAGYR 519

Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRS 168
           H  AVTE GE+YTWG  +       FG L  G     D   R    L + +S   +VS  
Sbjct: 520 HSAAVTEDGELYTWGEGD-------FGRLGHG-----DSNSRNIPTLVKDISNVGEVSCG 567

Query: 169 SGGTSS-GTDGR-----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVR 222
           S  T +   DGR     G G+ G                  GD N    P ++    G+ 
Sbjct: 568 SSHTIALSKDGRTVWSFGGGDNGKL--------------GHGDTNRVYKPKVIEALQGMF 613

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V AG + +LAL+  GQV+ WG G    LG GS       P  I              
Sbjct: 614 IRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE------------- 658

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                         +    +  I+ G  H   ++    +  +G    GQCGQG++   ++
Sbjct: 659 -------------ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPIT 705

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTI 365
            P  VS L GI I+ ++AG  H++
Sbjct: 706 KPKKVSGLDGIAIQQISAGTSHSL 729



 Score = 45.8 bits (107), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 4/92 (4%)

Query: 364 TICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
           T  +S   +VY +G N   QL  G  +    P+L  APS  +  ++++  G   T VI+ 
Sbjct: 363 TPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKL--APSFSD--AQTIEAGQYCTFVIST 418

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
           DG V   G   YG+LGLGD  +++   ++T E
Sbjct: 419 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFE 450


>gi|18073943|emb|CAC86116.1| retinitis pigmentosa GTPase regulator [Homo sapiens]
          Length = 815

 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 99/303 (32%), Positives = 144/303 (47%), Gaps = 45/303 (14%)

Query: 208 LSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR--------I 259
           +S   C+  L P  ++   A G  HTL  ++ G V+  G   EGQLGLG          I
Sbjct: 75  ISKPTCVKALKPE-KVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVI 133

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSV------NSEG------------PGFRVPGNY 301
              +S H I  +  S G + SAAL+          NSEG            P     GN 
Sbjct: 134 SFFTSEHKIKQL--SAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGNP 191

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST--DDELSPNCVSSLLGIQIEGVAA 359
           V  I+CG  HSA +T  G L  FG    G+ G  +    +  +P  VS +    I+ VA 
Sbjct: 192 VSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVIQ-VAC 250

Query: 360 GLWHTICISSDGDVYAFGGNQFGQLGTGGDQAET-LPRLLDAPSLENVHSKS---VSCGA 415
           G  HT+ ++ +  VY FG  QFGQLG G    ET  P++     +EN+  ++   +SCG 
Sbjct: 251 GGEHTVVLTENA-VYTFGLGQFGQLGLGTFLFETSEPKV-----IENIRDQTISYISCGE 304

Query: 416 RHTAVIADDGKVFCWGWNKYGQLGLG--DVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
            HTA+I D G ++ +G  ++G+LGLG  +  +  IP+  +     + + VACG  H ++ 
Sbjct: 305 NHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVF 364

Query: 473 AVP 475
           A P
Sbjct: 365 AAP 367



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/170 (35%), Positives = 93/170 (54%), Gaps = 2/170 (1%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           ++CG  HSAV+T    L  FG   +GQ G GS      P CV +L   +++  A G  HT
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHT 99

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           +  +  G+VYA GGN  GQLG G  +      ++   + E+   K +S G+  +A + +D
Sbjct: 100 LVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEH-KIKQLSAGSNTSAALTED 158

Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAV 474
           G++F WG N  GQ+GL +V +  +P QVTI   V   ++CG++H+  +  
Sbjct: 159 GRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGNPVSW-ISCGYYHSAFVTT 207



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 65/279 (23%), Positives = 126/279 (45%), Gaps = 38/279 (13%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIE------SSYGKDR 279
           ++ G  H+  ++   +++ +G    GQLGLGS+   +S P  +  ++      ++ G++ 
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSK-SAISKPTCVKALKPEKVKLAACGRNH 98

Query: 280 SAALSRGSV------NSEGP---------------GFRVPGNYVKGIACGGRHSAVITDA 318
           +   + G        N+EG                 F    + +K ++ G   SA +T+ 
Sbjct: 99  TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTED 158

Query: 319 GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           G L  +G    GQ G  +  +   P  V+  +G  +  ++ G +H+  +++DG++Y FG 
Sbjct: 159 GRLFMWGDNSEGQIGLKNVSNVCVPQQVT--IGNPVSWISCGYYHSAFVTTDGELYVFGE 216

Query: 379 NQFGQLGTGGDQ--AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYG 436
            + G+LG           P+L+     + +    V+CG  HT V+ ++  V+ +G  ++G
Sbjct: 217 PENGKLGLPNQLLGNHRTPQLVSEIPEKVIQ---VACGGEHTVVLTENA-VYTFGLGQFG 272

Query: 437 QLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLA 473
           QLGLG  +      +V   I       ++CG  HT L+ 
Sbjct: 273 QLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALIT 311



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 141/331 (42%), Gaps = 68/331 (20%)

Query: 103 AAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPR 162
           AA G  H +  TEGG VY  G       G   G L  G   +++ F   S F +E     
Sbjct: 92  AACGRNHTLVSTEGGNVYATG-------GNNEGQLGLGDTEERNTFHVISFFTSEH--KI 142

Query: 163 SQVSRSSGGTSSGT-DGR----GSGEEGSKRRRISLAKQTAESSSSGDENLS--AFPCLV 215
            Q+S  S  +++ T DGR    G   EG                  G +N+S    P  V
Sbjct: 143 KQLSAGSNTSAALTEDGRLFMWGDNSEG----------------QIGLKNVSNVCVPQQV 186

Query: 216 TL-NPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESS 274
           T+ NP   ++ ++ G  H+  ++  G+++ +G    G+LGL +++               
Sbjct: 187 TIGNP---VSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQL--------------- 228

Query: 275 YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
            G  R+  L             +P   ++ +ACGG H+ V+T+  A+ TFG G +GQ G 
Sbjct: 229 LGNHRTPQLVS----------EIPEKVIQ-VACGGEHTVVLTE-NAVYTFGLGQFGQLGL 276

Query: 335 GSTDDELS-PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAET 393
           G+   E S P  + ++    I  ++ G  HT  I+  G +Y FG  + G+LG G +    
Sbjct: 277 GTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTN 336

Query: 394 --LPRLLDAPSLENVHSKSVSCGARHTAVIA 422
             +P L    +      K V+CG  H  V A
Sbjct: 337 HFIPTL--CSNFLRFIVKLVACGGCHMVVFA 365


>gi|350593458|ref|XP_003483691.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
           scrofa]
          Length = 969

 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 83/266 (31%), Positives = 131/266 (49%), Gaps = 30/266 (11%)

Query: 212 PCLVTLNPGVRIATVAA--GGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP 269
           P LV       I  +AA   G H LAL+  G+V+ WG G  G+LG G  +     P   P
Sbjct: 681 PQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEP 735

Query: 270 CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
            + S++   ++                  G +V  IACG  +SA IT  G L T+G G Y
Sbjct: 736 KVISAFSGKQA------------------GKHVVHIACGSTYSAAITAEGELYTWGRGNY 777

Query: 330 GQCGQGSTDDELSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTG 387
           G+ G GS++DE  P  V+ L G+++  VA  +G   T+ ++ +G V+++G   +G+LG G
Sbjct: 778 GRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 837

Query: 388 GDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
           G      P+L++   L+++    V CG++ +  +  DG+V+ WG     +LG G      
Sbjct: 838 GSDGCKTPKLIE--KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR 895

Query: 448 IPSQVT-IEGCVPRNVACGWWHTLLL 472
            P  +  ++G    +VA G  H L L
Sbjct: 896 YPKLLEGLQGKKVIDVAAGSTHCLAL 921



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 93/217 (42%), Gaps = 38/217 (17%)

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
           SS DE   A P LV    G+++  VA  +G   TLA+++ GQVW WG G  G+LG G   
Sbjct: 784 SSEDE---AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG--- 837

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITD 317
                                     GS   + P    ++    V  + CG + S  +T 
Sbjct: 838 --------------------------GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTK 871

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
            G + ++G G   + G G+ +    P  +  L G ++  VAAG  H + ++ D +V+++G
Sbjct: 872 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 931

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
            N   Q        +  P  L  P L+  H   ++CG
Sbjct: 932 SNDQCQHFDTLRVTKPEPSAL--PGLDTKHIVGIACG 966


>gi|449453906|ref|XP_004144697.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Cucumis
           sativus]
          Length = 481

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 112/383 (29%), Positives = 174/383 (45%), Gaps = 61/383 (15%)

Query: 104 AAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRS 163
           A G AH + +TE G VY  G          FG L    G+  +  +R S+   E   P+ 
Sbjct: 136 ACGGAHTLFLTESGRVYATGLNN-------FGQL----GISDE--KRFSTEPVEVRIPKE 182

Query: 164 QVSRSSGGTSS---GTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPG 220
            +  S+G   S     DG       +   ++ L K++A++           P  V    G
Sbjct: 183 AMHISAGYNHSCVVTADGELYMWGVNSNGQLGLGKKSAKAVH--------LPTKVDSLDG 234

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSY-GKDR 279
           + I   A G  H++A++D G+V+ WG G  G+LG G               ES++ G  +
Sbjct: 235 IVIKRAALGSDHSIAVADGGEVFSWGDGRSGRLGHGH--------------ESTFLGFLK 280

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDD 339
           S +     +  E  G +     VK +A G  HSA + + GA+  FG     +   G  + 
Sbjct: 281 STSEHTPRLIKELEGIK-----VKHVAAGMLHSACVDENGAVYIFGERATNRVSFGEANK 335

Query: 340 ELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLD 399
             +P+ +S+LL    E VA G +HT  ++  GD+Y++G N+ G LG G      LP  ++
Sbjct: 336 ATTPSLISTLL--DCEEVACGGYHTCVLTKGGDLYSWGSNENGCLGNGSTSVSHLPERVE 393

Query: 400 APSLENVHSKSVSCGARHTAVIADDGKVFCWGW------------NKYGQLGLGDVIDRN 447
            P  ++  SK VSCG +HTA I+  G +F WGW            +  GQLG G  +D  
Sbjct: 394 GPFSKSPVSK-VSCGWKHTAAIS-GGAIFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYV 451

Query: 448 IPSQVTI-EGCVPRNVACGWWHT 469
            P+++ + E      V+CG+ HT
Sbjct: 452 KPTKIDLGENVKVVQVSCGFNHT 474



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 82/287 (28%), Positives = 128/287 (44%), Gaps = 45/287 (15%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSP----HPIPCIESSYGKDRSA 281
           +A GG HTL L++ G+V+  G    GQLG+    R  + P     P   +  S G + S 
Sbjct: 135 IACGGAHTLFLTESGRVYATGLNNFGQLGISDEKRFSTEPVEVRIPKEAMHISAGYNHSC 194

Query: 282 ALSRGS------VNSEG---------PGFRVP-------GNYVKGIACGGRHSAVITDAG 319
            ++         VNS G             +P       G  +K  A G  HS  + D G
Sbjct: 195 VVTADGELYMWGVNSNGQLGLGKKSAKAVHLPTKVDSLDGIVIKRAALGSDHSIAVADGG 254

Query: 320 ALLTFGWGLYGQCGQG---------STDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
            + ++G G  G+ G G          +  E +P  +  L GI+++ VAAG+ H+ C+  +
Sbjct: 255 EVFSWGDGRSGRLGHGHESTFLGFLKSTSEHTPRLIKELEGIKVKHVAAGMLHSACVDEN 314

Query: 371 GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
           G VY FG     ++  G     T P L+       +  + V+CG  HT V+   G ++ W
Sbjct: 315 GAVYIFGERATNRVSFGEANKATTPSLISTL----LDCEEVACGGYHTCVLTKGGDLYSW 370

Query: 431 GWNKYGQLGLGDVIDRNIPSQVTIEGCVPRN----VACGWWHTLLLA 473
           G N+ G LG G     ++P +V  EG   ++    V+CGW HT  ++
Sbjct: 371 GSNENGCLGNGSTSVSHLPERV--EGPFSKSPVSKVSCGWKHTAAIS 415



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 117/245 (47%), Gaps = 40/245 (16%)

Query: 237 SDIGQVWG--WGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPG 294
           SD G+ +G  WG G  G+LGLG+   + S   P+PC  SS+ ++                
Sbjct: 92  SDSGKRFGAVWGNGDFGRLGLGN---LDSQWSPVPC--SSFDRE---------------- 130

Query: 295 FRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQI 354
                  +KGIACGG H+  +T++G +   G   +GQ G  S +   S   V   +  + 
Sbjct: 131 ------MLKGIACGGAHTLFLTESGRVYATGLNNFGQLGI-SDEKRFSTEPVEVRIPKEA 183

Query: 355 EGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
             ++AG  H+  +++DG++Y +G N  GQLG G   A+ +       SL+ +  K  + G
Sbjct: 184 MHISAGYNHSCVVTADGELYMWGVNSNGQLGLGKKSAKAVHLPTKVDSLDGIVIKRAALG 243

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLG---------DVIDRNIPSQVT-IEGCVPRNVAC 464
           + H+  +AD G+VF WG  + G+LG G              + P  +  +EG   ++VA 
Sbjct: 244 SDHSIAVADGGEVFSWGDGRSGRLGHGHESTFLGFLKSTSEHTPRLIKELEGIKVKHVAA 303

Query: 465 GWWHT 469
           G  H+
Sbjct: 304 GMLHS 308



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 91/359 (25%), Positives = 140/359 (38%), Gaps = 79/359 (22%)

Query: 33  PLVVRLP---LTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDD----LGQSYVTSGKH 85
           P+ VR+P   + + + +   C         ++   +L  WG   +    LG+    S K 
Sbjct: 174 PVEVRIPKEAMHISAGYNHSC--------VVTADGELYMWGVNSNGQLGLGKK---SAKA 222

Query: 86  GEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRV-FGDLSTGTGLD 144
             +P          I +AA G  H +AV +GGEV++WG      SGR+  G  ST  G  
Sbjct: 223 VHLPTKVDSLDGIVIKRAALGSDHSIAVADGGEVFSWGDGR---SGRLGHGHESTFLGFL 279

Query: 145 KDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGS----GEEGSKRRRISLAKQTAES 200
           K   E     + E    + +   +    S+  D  G+    GE  + R            
Sbjct: 280 KSTSEHTPRLIKELEGIKVKHVAAGMLHSACVDENGAVYIFGERATNR------------ 327

Query: 201 SSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR 260
            S G+ N +  P L++    +    VA GG HT  L+  G ++ WG    G LG G    
Sbjct: 328 VSFGEANKATTPSLIS--TLLDCEEVACGGYHTCVLTKGGDLYSWGSNENGCLGNG---- 381

Query: 261 MVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA 320
                              S ++S      EGP  + P   V  ++CG +H+A I+  GA
Sbjct: 382 -------------------STSVSHLPERVEGPFSKSP---VSKVSCGWKHTAAIS-GGA 418

Query: 321 LLTFGWGLY------------GQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI 367
           + T+GWG              GQ G GS  D + P  +     +++  V+ G  HT  I
Sbjct: 419 IFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYVKPTKIDLGENVKVVQVSCGFNHTGAI 477


>gi|432098306|gb|ELK28108.1| X-linked retinitis pigmentosa GTPase regulator, partial [Myotis
           davidii]
          Length = 1369

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 61/170 (35%), Positives = 94/170 (55%), Gaps = 2/170 (1%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           +ACG  H+AVIT    L  FG   +GQ G GS      P CV +L   +++ VA G  HT
Sbjct: 34  LACGDEHTAVITGNKKLYMFGRNDWGQLGLGSKSAVCKPTCVKALKPEKVKHVACGRNHT 93

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           +  +  G VYA GGN  GQLG G  +      L++  + ++   K +S G+  +A + +D
Sbjct: 94  LVSTEGGKVYAVGGNNEGQLGLGDTEDRNTFHLIEFFTSQH-QFKQLSAGSNTSAALTED 152

Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAV 474
           GK+F WG N  GQ+GL +V +   P +VT+ G     ++CG++H+  + +
Sbjct: 153 GKLFMWGENSEGQIGLNNVCNVYFPHEVTV-GKPIAWISCGYYHSAFVTM 201



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 138/298 (46%), Gaps = 45/298 (15%)

Query: 213 CLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR--------IRMVSS 264
           C+  L P  ++  VA G  HTL  ++ G+V+  G   EGQLGLG          I   +S
Sbjct: 74  CVKALKPE-KVKHVACGRNHTLVSTEGGKVYAVGGNNEGQLGLGDTEDRNTFHLIEFFTS 132

Query: 265 PHPIPCIESSYGKDRSAALSRGSV------NSEG------------PGFRVPGNYVKGIA 306
            H    +  S G + SAAL+          NSEG            P     G  +  I+
Sbjct: 133 QHQFKQL--SAGSNTSAALTEDGKLFMWGENSEGQIGLNNVCNVYFPHEVTVGKPIAWIS 190

Query: 307 CGGRHSAVITDAGALLTFGWGLYGQCG--QGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           CG  HSA +T  G L TFG   +G+ G  +    +   P  V  +    I+ VA G  HT
Sbjct: 191 CGYYHSAFVTMEGELYTFGEPEFGKLGLPKQLLMNHKVPQLVPGIPEKVIQ-VACGGGHT 249

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETL-PRLLDAPSLENVHSKSVSCGARHTAVIAD 423
           + ++    VY FG  QFGQLG G    ET  P++++  S+++     +SCG  HTA+I D
Sbjct: 250 VVLTEKA-VYNFGLGQFGQLGLGTFVFETTEPKIME--SVKDHKITYISCGENHTALITD 306

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC------VPRNVACGWWHTLLLAVP 475
            G+++ +G  +YG+LGLG     N  +Q     C          VACG  H ++ A P
Sbjct: 307 IGRMYTFGDGRYGKLGLG---MENFTNQFVPTLCPNFLRFKVHLVACGGCHMVVFATP 361



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 102/390 (26%), Positives = 161/390 (41%), Gaps = 85/390 (21%)

Query: 99  SIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQ 158
            +   A G  H +  TEGG+VY  G       G   G L  G   D++ F      L E 
Sbjct: 82  KVKHVACGRNHTLVSTEGGKVYAVG-------GNNEGQLGLGDTEDRNTFH-----LIEF 129

Query: 159 VSPRSQVSRSSGGTSSGT----DGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSA 210
            + + Q  + S G+++      DG+    G   EG    +I L                 
Sbjct: 130 FTSQHQFKQLSAGSNTSAALTEDGKLFMWGENSEG----QIGLNNVCN----------VY 175

Query: 211 FPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPC 270
           FP  VT+  G  IA ++ G  H+  ++  G+++ +G    G+LGL  ++ M    H +P 
Sbjct: 176 FPHEVTV--GKPIAWISCGYYHSAFVTMEGELYTFGEPEFGKLGLPKQLLM---NHKVPQ 230

Query: 271 IESSYGKDRSAALSRGSVNSEGPGFRVPG--NYVKGIACGGRHSAVITDAGALLTFGWGL 328
           +                         VPG    V  +ACGG H+ V+T+  A+  FG G 
Sbjct: 231 L-------------------------VPGIPEKVIQVACGGGHTVVLTEK-AVYNFGLGQ 264

Query: 329 YGQCGQGSTDDELS-PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG 387
           +GQ G G+   E + P  + S+   +I  ++ G  HT  I+  G +Y FG  ++G+LG G
Sbjct: 265 FGQLGLGTFVFETTEPKIMESVKDHKITYISCGENHTALITDIGRMYTFGDGRYGKLGLG 324

Query: 388 GDQ--AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVID 445
            +    + +P L   P+        V+CG  H  V A    V         ++ LG + D
Sbjct: 325 MENFTNQFVPTL--CPNFLRFKVHLVACGGCHMVVFATPRPVI-------EKIELGKIRD 375

Query: 446 RNIP--SQVTIEGCVPRNVACGWWHTLLLA 473
             IP  + ++I     RN+    +H  L A
Sbjct: 376 SRIPAAASLSITDLTSRNI----FHRTLSA 401



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 125/278 (44%), Gaps = 36/278 (12%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM-----VSSPHPIPCIESSYGKDRS 280
           +A G  HT  ++   +++ +G    GQLGLGS+  +     V +  P      + G++ +
Sbjct: 34  LACGDEHTAVITGNKKLYMFGRNDWGQLGLGSKSAVCKPTCVKALKPEKVKHVACGRNHT 93

Query: 281 AALSRGSV------NSEGP---------------GFRVPGNYVKGIACGGRHSAVITDAG 319
              + G        N+EG                 F    +  K ++ G   SA +T+ G
Sbjct: 94  LVSTEGGKVYAVGGNNEGQLGLGDTEDRNTFHLIEFFTSQHQFKQLSAGSNTSAALTEDG 153

Query: 320 ALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN 379
            L  +G    GQ G  +  +   P+ V+  +G  I  ++ G +H+  ++ +G++Y FG  
Sbjct: 154 KLFMWGENSEGQIGLNNVCNVYFPHEVT--VGKPIAWISCGYYHSAFVTMEGELYTFGEP 211

Query: 380 QFGQLGTGGD--QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQ 437
           +FG+LG          +P+L+     + +    V+CG  HT V+ +   V+ +G  ++GQ
Sbjct: 212 EFGKLGLPKQLLMNHKVPQLVPGIPEKVIQ---VACGGGHTVVLTEKA-VYNFGLGQFGQ 267

Query: 438 LGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLA 473
           LGLG  +      ++  +++      ++CG  HT L+ 
Sbjct: 268 LGLGTFVFETTEPKIMESVKDHKITYISCGENHTALIT 305


>gi|431902378|gb|ELK08879.1| RCC1 and BTB domain-containing protein 2 [Pteropus alecto]
          Length = 621

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 63/176 (35%), Positives = 104/176 (59%), Gaps = 7/176 (3%)

Query: 303 KGIAC----GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS-LLGIQIEGV 357
           K IAC     G H  + T  G + T+G   Y Q G G+T+  L P  +S+ L   Q+  V
Sbjct: 168 KKIACFSYGSGPHVILATTEGEIFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV 227

Query: 358 AAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARH 417
           A G +H++ ++SDG+V+A+G N  GQ+G+G    + +PR +    L+N    +++CG   
Sbjct: 228 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTG-CLQNKVVVNIACGQMC 286

Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
           +  + D+G+V+ WG+N  GQLGLG   +++ P ++  ++G   + VACG+ HTL+L
Sbjct: 287 SVAVVDNGEVYVWGYNGNGQLGLGSSGNQSTPCRIAALQGICVQRVACGYAHTLVL 342



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 119/238 (50%), Gaps = 30/238 (12%)

Query: 220 GVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
           G +IA  + G G H +  +  G+++ WG+    QLG G+     ++   +PC  S+    
Sbjct: 167 GKKIACFSYGSGPHVILATTEGEIFTWGHNAYSQLGNGT-----TNHGLVPCHIST---- 217

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
                             +    V  +ACG  HS V+T  G +  +G+   GQ G GST 
Sbjct: 218 -----------------NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTA 260

Query: 339 DELSPNCVSSLLGIQIE-GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
           ++  P  V+  L  ++   +A G   ++ +  +G+VY +G N  GQLG G    ++ P  
Sbjct: 261 NQPIPRRVTGCLQNKVVVNIACGQMCSVAVVDNGEVYVWGYNGNGQLGLGSSGNQSTPCR 320

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
           + A  L+ +  + V+CG  HT V+ D+G+V+ WG N YGQLG G+  +++ P+ V +E
Sbjct: 321 IAA--LQGICVQRVACGYAHTLVLTDEGQVYVWGANSYGQLGTGNKSNQSYPTPVAVE 376



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 109/231 (47%), Gaps = 30/231 (12%)

Query: 203 SGDENLSAFPCLVTLN-PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +G  N    PC ++ N    ++  VA G  H+L L+  G+V+ WGY   GQ+G GS    
Sbjct: 203 NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---- 258

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
            ++  PIP         R     +  V             V  IACG   S  + D G +
Sbjct: 259 -TANQPIP--------RRVTGCLQNKV-------------VVNIACGQMCSVAVVDNGEV 296

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             +G+   GQ G GS+ ++ +P  +++L GI ++ VA G  HT+ ++ +G VY +G N +
Sbjct: 297 YVWGYNGNGQLGLGSSGNQSTPCRIAALQGICVQRVACGYAHTLVLTDEGQVYVWGANSY 356

Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           GQLGTG    ++ P  +       +  +  +C + HT A     G V+ WG
Sbjct: 357 GQLGTGNKSNQSYPTPVAVEKDRII--EIAACHSTHTSAAKTQGGHVYMWG 405



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 75/175 (42%), Gaps = 26/175 (14%)

Query: 306 ACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTI 365
           AC     A ++    L    W ++  C +      +   CV    G ++      L+ T+
Sbjct: 81  ACAEPIQATVSSLKMLDVGKWPIFSLCSEEELQ-LIRQACVFGSAGNEV------LYSTV 133

Query: 366 CISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDG 425
               + +++  G N  G LG G  Q+   PR LD+ S + +   S   G  H  +   +G
Sbjct: 134 ----NDEIFVLGTNCCGCLGLGDIQSTIEPRRLDSLSGKKIACFSYGSGP-HVILATTEG 188

Query: 426 KVFCWGWNKYGQLGLGDV--------IDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           ++F WG N Y QLG G          I  N+ ++  IE      VACG +H+L+L
Sbjct: 189 EIFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIE------VACGSYHSLVL 237



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 89/213 (41%), Gaps = 37/213 (17%)

Query: 65  KLITWG--STDDLGQSYVTSGKHGEIPEPFPLP-TEASIVKAAAGWAHCVAVTEGGEVYT 121
           ++ TWG  +   LG     +  HG +P       +   +++ A G  H + +T  GEV+ 
Sbjct: 189 EIFTWGHNAYSQLGNG---TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFA 245

Query: 122 WGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS------PRSQVSRSSGGTSSG 175
           WG+          G + +G+  ++ +  R +  L  +V           V+    G    
Sbjct: 246 WGYNNS-------GQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSVAVVDNGEVYV 298

Query: 176 TDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLA 235
               G+G+ G                SSG+++    PC +    G+ +  VA G  HTL 
Sbjct: 299 WGYNGNGQLGL--------------GSSGNQST---PCRIAALQGICVQRVACGYAHTLV 341

Query: 236 LSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
           L+D GQV+ WG    GQLG G++    S P P+
Sbjct: 342 LTDEGQVYVWGANSYGQLGTGNKSNQ-SYPTPV 373


>gi|282722850|gb|ADA84471.1| retinitis pigmentosa GTPase regulator protein 1 [Danio rerio]
          Length = 1697

 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 96/302 (31%), Positives = 136/302 (45%), Gaps = 51/302 (16%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLG--------SRIRMVS 263
           P  V +  G R  +VA G  HTL  +  G++   G   +GQLGLG         R+R   
Sbjct: 77  PVCVKVLKGERAQSVACGTDHTLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRLRPFC 136

Query: 264 SPHPIPCIESSYGKDRSAALSRGSV------NSEG------------PGFRVPGNYVKGI 305
              PI  +  S G   SAAL+          NS G            P     G  +  +
Sbjct: 137 DYAPIKLL--SAGDHTSAALTEDGRLFLWGDNSAGQLGFGNDSHALLPQELNMGQSIHWV 194

Query: 306 ACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD--DELSPNCVSSLLGIQIEGVAAGLWH 363
           +CG RHSA++TD+G + TFG    G+ G  +    +   P  V SL  +    VA G  H
Sbjct: 195 SCGYRHSALVTDSGDVYTFGESADGRLGLSAHQLANHSYPQRVESLRSVL--QVACGGKH 252

Query: 364 TICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP----SLENVHSKSVSCGARHTA 419
           T+ ++ D ++Y FGG +FGQLG G      L  + D+P             V+CG +H+A
Sbjct: 253 TLALTED-ELYCFGGGEFGQLGLG-----MLVFVADSPVAVGHFRKDRVTHVTCGEQHSA 306

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVP------RNVACGWWHTLLLA 473
           +I D G ++ +G  ++G+LG G   D N  +Q T   C          VACG  H L+ A
Sbjct: 307 LITDSGLLYTFGDGRHGKLGHG---DENFTNQFTPTVCQRFFEYSVMTVACGSSHMLVFA 363

Query: 474 VP 475
            P
Sbjct: 364 RP 365



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/169 (35%), Positives = 88/169 (52%), Gaps = 4/169 (2%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           I+CG  HSA +T+ G L  FG    GQ G         P CV  L G + + VA G  HT
Sbjct: 39  ISCGQSHSAFVTEQGRLFVFGDNNRGQLGLQIKGPVTKPVCVKVLKGERAQSVACGTDHT 98

Query: 365 ICISSDGDVYAFGGNQFGQLGTGG-DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
           +  +S G++ A GGN  GQLG G  + + +  RL   P  +    K +S G   +A + +
Sbjct: 99  LVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRL--RPFCDYAPIKLLSAGDHTSAALTE 156

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           DG++F WG N  GQLG G+     +P ++ + G     V+CG+ H+ L+
Sbjct: 157 DGRLFLWGDNSAGQLGFGNDSHALLPQELNM-GQSIHWVSCGYRHSALV 204



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/255 (28%), Positives = 120/255 (47%), Gaps = 45/255 (17%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP-CIESSYGKDRSAALS 284
           ++ G  H+  +++ G+++ +G    GQLGL      +  P   P C++            
Sbjct: 39  ISCGQSHSAFVTEQGRLFVFGDNNRGQLGL-----QIKGPVTKPVCVKV----------- 82

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS-- 342
                       + G   + +ACG  H+ V T  G +L  G    GQ G G  +D +S  
Sbjct: 83  ------------LKGERAQSVACGTDHTLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQ 130

Query: 343 ---PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLD 399
              P C  + + +    ++AG   +  ++ DG ++ +G N  GQLG G D    LP+ L+
Sbjct: 131 RLRPFCDYAPIKL----LSAGDHTSAALTEDGRLFLWGDNSAGQLGFGNDSHALLPQELN 186

Query: 400 APSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG--DVIDRNIPSQVTIEGC 457
               +++H   VSCG RH+A++ D G V+ +G +  G+LGL    + + + P +V     
Sbjct: 187 MG--QSIH--WVSCGYRHSALVTDSGDVYTFGESADGRLGLSAHQLANHSYPQRVESLRS 242

Query: 458 VPRNVACGWWHTLLL 472
           V + VACG  HTL L
Sbjct: 243 VLQ-VACGGKHTLAL 256


>gi|327261081|ref|XP_003215360.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Anolis
           carolinensis]
          Length = 526

 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 132/269 (49%), Gaps = 31/269 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMV 262
           GD   S  P  +    G +I  ++ G G H +  +  G+V+ WG+    QLG G+     
Sbjct: 57  GDTQNSVEPRRLDTLCGKKITCLSYGSGPHVVVATAEGEVYTWGHNAYSQLGNGT----- 111

Query: 263 SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL 322
           ++   +PC            +S   VN +          V  +ACG  HS ++T  G + 
Sbjct: 112 TNNSLLPC-----------QISTNLVNKK----------VTEVACGSHHSMILTSDGEVY 150

Query: 323 TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE-GVAAGLWHTICISSDGDVYAFGGNQF 381
           T+G+   GQ G GST ++  P  V+S L  +I   +A G   ++ +  +G+VY +G N  
Sbjct: 151 TWGYNNSGQVGSGSTANQAIPRRVTSCLQNKIAVNIACGQMCSMAVVENGEVYVWGYNGN 210

Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
           GQLG G    +  P  + A  L+ +  + V+CG  HT V+ D+G+++ WG N YGQLG G
Sbjct: 211 GQLGLGNSGNQPTPCRIAA--LQGIRVQRVACGYAHTLVLTDEGQMYAWGANSYGQLGTG 268

Query: 442 DVIDRNIPSQVTIE-GCVPRNVACGWWHT 469
           +  +++ P  +T++   V    AC   HT
Sbjct: 269 NRSNQSYPVPITVDKDRVIEIAACHSAHT 297



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 61/176 (34%), Positives = 105/176 (59%), Gaps = 7/176 (3%)

Query: 303 KGIAC----GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS-LLGIQIEGV 357
           K I C     G H  V T  G + T+G   Y Q G G+T++ L P  +S+ L+  ++  V
Sbjct: 74  KKITCLSYGSGPHVVVATAEGEVYTWGHNAYSQLGNGTTNNSLLPCQISTNLVNKKVTEV 133

Query: 358 AAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARH 417
           A G  H++ ++SDG+VY +G N  GQ+G+G    + +PR + +  L+N  + +++CG   
Sbjct: 134 ACGSHHSMILTSDGEVYTWGYNNSGQVGSGSTANQAIPRRVTS-CLQNKIAVNIACGQMC 192

Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
           +  + ++G+V+ WG+N  GQLGLG+  ++  P ++  ++G   + VACG+ HTL+L
Sbjct: 193 SMAVVENGEVYVWGYNGNGQLGLGNSGNQPTPCRIAALQGIRVQRVACGYAHTLVL 248



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 115/233 (49%), Gaps = 34/233 (14%)

Query: 203 SGDENLSAFPCLVTLN-PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +G  N S  PC ++ N    ++  VA G  H++ L+  G+V+ WGY   GQ+G GS    
Sbjct: 109 NGTTNNSLLPCQISTNLVNKKVTEVACGSHHSMILTSDGEVYTWGYNNSGQVGSGSTANQ 168

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
                   C+++           + +VN               IACG   S  + + G +
Sbjct: 169 AIPRRVTSCLQN-----------KIAVN---------------IACGQMCSMAVVENGEV 202

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             +G+   GQ G G++ ++ +P  +++L GI+++ VA G  HT+ ++ +G +YA+G N +
Sbjct: 203 YVWGYNGNGQLGLGNSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQMYAWGANSY 262

Query: 382 GQLGTGG--DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDG-KVFCWG 431
           GQLGTG   +Q+  +P  +D   +  +     +C + HT+     G +V+ WG
Sbjct: 263 GQLGTGNRSNQSYPVPITVDKDRVIEI----AACHSAHTSAAKTQGSQVYMWG 311



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 79/274 (28%), Positives = 110/274 (40%), Gaps = 53/274 (19%)

Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSP---RSQV 165
           H V  T  GEVYTWG          +  L  GT          +S L  Q+S      +V
Sbjct: 86  HVVVATAEGEVYTWGHN-------AYSQLGNGT--------TNNSLLPCQISTNLVNKKV 130

Query: 166 SRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA- 224
           +  + G+         GE        +     +    SG     A P  VT     +IA 
Sbjct: 131 TEVACGSHHSMILTSDGE------VYTWGYNNSGQVGSGSTANQAIPRRVTSCLQNKIAV 184

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +A G   ++A+ + G+V+ WGY G GQLGLG+     S   P PC        R AAL 
Sbjct: 185 NIACGQMCSMAVVENGEVYVWGYNGNGQLGLGN-----SGNQPTPC--------RIAALQ 231

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN 344
                    G R     V+ +ACG  H+ V+TD G +  +G   YGQ G G+  ++  P 
Sbjct: 232 ---------GIR-----VQRVACGYAHTLVLTDEGQMYAWGANSYGQLGTGNRSNQSYPV 277

Query: 345 CVSSLLGIQIEGVAAGLWHTICISSDG-DVYAFG 377
            ++      IE  A    HT    + G  VY +G
Sbjct: 278 PITVDKDRVIEIAACHSAHTSAAKTQGSQVYMWG 311



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 3/108 (2%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           ++ + +V+A G N  G LG G  Q    PR LD    + +   S   G  H  V   +G+
Sbjct: 37  VTENNEVFALGTNCSGCLGVGDTQNSVEPRRLDTLCGKKITCLSYGSGP-HVVVATAEGE 95

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPR--NVACGWWHTLLL 472
           V+ WG N Y QLG G   +  +P Q++      +   VACG  H+++L
Sbjct: 96  VYTWGHNAYSQLGNGTTNNSLLPCQISTNLVNKKVTEVACGSHHSMIL 143


>gi|395855546|ref|XP_003800216.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Otolemur garnettii]
          Length = 5093

 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 129/255 (50%), Gaps = 29/255 (11%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           V+IA   + G H LAL+  G+V+ WG G  G+LG G  +     P   P + S++   ++
Sbjct: 757 VKIAA-HSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISTFSGKQA 810

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                             G +V  IACG  +SA IT  G L T+G G YG+ G GS++DE
Sbjct: 811 ------------------GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 852

Query: 341 LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
             P  V+ L G+++  VA  +G   T+ ++ +G V+++G   +G+LG GG      P+L+
Sbjct: 853 AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLI 912

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGC 457
           +   L+++    V CG++ +  +  DG+V+ WG     +LG G       P  +  ++G 
Sbjct: 913 E--KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGK 970

Query: 458 VPRNVACGWWHTLLL 472
              +VA G  H L L
Sbjct: 971 KVIDVAAGSTHCLAL 985



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 128/303 (42%), Gaps = 80/303 (26%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GGRH  AL+  G+V+ WG G +G+LG  SR+     P  I  +++   +D  
Sbjct: 3308 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRD-- 3364

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                    IACG  HSA +T +G L T+G G YG+ G G    +
Sbjct: 3365 ------------------------IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ 3400

Query: 341  LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V  LLG ++  VA G     T+ ++ +G V+++G   FG+LG GG +   +P+ +
Sbjct: 3401 LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNI 3460

Query: 399  DAPSLE------------------------------------NVHSKS------------ 410
            +  + +                                    +VH +             
Sbjct: 3461 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI 3520

Query: 411  --VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWW 467
              V+ GA H   + D G+V+ WG N +GQ G G       P+ V  +EG     VACG  
Sbjct: 3521 VHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVHGLEGQKITRVACGSS 3580

Query: 468  HTL 470
            H++
Sbjct: 3581 HSV 3583



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 102/364 (28%), Positives = 141/364 (38%), Gaps = 80/364 (21%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V   +G  HC+A++  GEVY+WG  E        G L  G     D      S    +V+
Sbjct: 4301 VAVNSGGKHCLALSSEGEVYSWGEAE-------DGKLGHGNRSPCDRPRVIESLRGIEVA 4353

Query: 161  PRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPG 220
              +    + G  S+     G      K R   L    +E            P LV    G
Sbjct: 4354 DVA----AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLK--------PKLVEALQG 4401

Query: 221  VRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
             R+  +A  +G   TL L+D   VW WG G  G+LG G                   G D
Sbjct: 4402 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-------------------GSD 4442

Query: 279  RSAALSRGSVNSEGPGFRVPGNY-------VKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
                           G +VP          V  + CG + S  +T +GA+ T+G G Y +
Sbjct: 4443 ---------------GCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR 4487

Query: 332  CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
             G GS D    P  V  L G ++  +A G  H +C + DG+VY +G N  GQLG G   A
Sbjct: 4488 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNA 4547

Query: 392  ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
               PRL+ A  L+      V+CG+ HT           W  +K    G        +P+Q
Sbjct: 4548 IQRPRLVAA--LQGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPAQ 4589

Query: 452  VTIE 455
            V +E
Sbjct: 4590 VPME 4593



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 112/398 (28%), Positives = 165/398 (41%), Gaps = 60/398 (15%)

Query: 55   GFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVT 114
            G   A +   K+  WG  +D  Q     G   ++P      +  ++V+ A G     AVT
Sbjct: 3211 GLESAATIRTKVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT 3269

Query: 115  EGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG--- 171
              G+VY  G      +GR+   LS+GT        RQ + L+  V    +V+  SGG   
Sbjct: 3270 VEGKVYACGE---ATNGRLGLGLSSGTV----PIPRQVTALSSYVV--KKVAVHSGGRHA 3320

Query: 172  TSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVA 227
            T+   DG+    G G++G         K    S  + D+     P L+      RI  +A
Sbjct: 3321 TALTVDGKVFSWGEGDDG---------KLGHFSRMNCDK-----PRLIEALKTKRIRDIA 3366

Query: 228  AGGRHTLALSDIGQVWGWGYGGEGQLGLGS-----RIRMVSSPHPIPCIESSYGKDRSAA 282
             G  H+ AL+  G+++ WG G  G+LG G      + +MV        I+ + G   +  
Sbjct: 3367 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 3426

Query: 283  LS---RGSVNSEGPG-------------------FRVPGNYVKGIACGGRHSAVITDAGA 320
            L+    G V S G G                    R+ G  V  I CG + S  +T +G 
Sbjct: 3427 LALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGV 3486

Query: 321  LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
            + T+G G Y + G GS      P  V  L G +I  VA G  H + ++  G VYA+G N 
Sbjct: 3487 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDND 3546

Query: 381  FGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
             GQ G G       P L+    LE      V+CG+ H+
Sbjct: 3547 HGQQGNGTTTVNRKPTLVHG--LEGQKITRVACGSSHS 3582



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 120/268 (44%), Gaps = 42/268 (15%)

Query: 233  TLALSDIGQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAALSRG---- 286
            TL+    G ++GWG+   GQLG   G+++++     P PC   +    R   L  G    
Sbjct: 4204 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKV-----PTPC--EALATLRPVQLIGGEQTL 4256

Query: 287  -SVNSEGPGF-------------------------RVPGNYVKGIAC--GGRHSAVITDA 318
             +V ++G  +                          +   ++K +A   GG+H   ++  
Sbjct: 4257 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4316

Query: 319  GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            G + ++G    G+ G G+      P  + SL GI++  VAAG  H+ C+++ GD+Y +G 
Sbjct: 4317 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVADVAAGGAHSACVTAAGDLYTWGK 4376

Query: 379  NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
             ++G+LG    + +  P+L++A     V   +   G   T  + DD  V+ WG   YG+L
Sbjct: 4377 GRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKL 4436

Query: 439  GLGDVIDRNIPSQV-TIEGCVPRNVACG 465
            G G      +P ++ ++ G     V CG
Sbjct: 4437 GRGGSDGCKVPMKIDSLTGLGVVKVECG 4464



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 92/217 (42%), Gaps = 38/217 (17%)

Query: 202  SSGDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
            SS DE   A P LV    G+++  VA  +G   TLA+++ GQVW WG G  G+LG G   
Sbjct: 848  SSEDE---AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG--- 901

Query: 260  RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITD 317
                                      GS   + P    ++    V  + CG + S  +T 
Sbjct: 902  --------------------------GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTK 935

Query: 318  AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
             G + ++G G   + G G+ +    P  +  L G ++  VAAG  H + ++ D +V+++G
Sbjct: 936  DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 995

Query: 378  GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
             N   Q         T P     P L+  H   ++CG
Sbjct: 996  SND--QCQHFDTLRVTKPEPTALPGLDTKHIVGIACG 1030



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 85/177 (48%), Gaps = 6/177 (3%)

Query: 302  VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVA-- 358
            V  +A G +    +T  G +   G    G+ G G +   +  P  V++L    ++ VA  
Sbjct: 3255 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQVTALSSYVVKKVAVH 3314

Query: 359  AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
            +G  H   ++ DG V+++G    G+LG         PRL++A  L+    + ++CG+ H+
Sbjct: 3315 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA--LKTKRIRDIACGSSHS 3372

Query: 419  AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACGWWHTLLLAV 474
            A +   G+++ WG  +YG+LG GD   +  P  V +  G     VACG      LA+
Sbjct: 3373 AALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3429



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 82/310 (26%), Positives = 121/310 (39%), Gaps = 47/310 (15%)

Query: 57   AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEG 116
            A A++   K+ +WG  DD G+    S  + + P          I   A G +H  A+T  
Sbjct: 3320 ATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 3378

Query: 117  GEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGT 176
            GE+YTWG  E    GR  G     T L   + +        QV+  S+ +++   T  G 
Sbjct: 3379 GELYTWGLGE---YGR-LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3434

Query: 177  DGR-GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLA 235
                G G+ G   R              G E  +    +  LN G  +  +  G + +LA
Sbjct: 3435 VFSWGDGDFGKLGR-------------GGSEGCNIPQNIERLN-GQGVCQIECGAQFSLA 3480

Query: 236  LSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF 295
            L+  G VW WG G   +LG GS +  V  P  +                         G 
Sbjct: 3481 LTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQVVE------------------------GL 3515

Query: 296  RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
            R  G  +  +A G  H   +TD+G +  +G   +GQ G G+T     P  V  L G +I 
Sbjct: 3516 R--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVHGLEGQKIT 3573

Query: 356  GVAAGLWHTI 365
             VA G  H++
Sbjct: 3574 RVACGSSHSV 3583



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 5/73 (6%)

Query: 53   GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
            G  F++A++ S  + TWG  D   LG     S  H   P          ++  A G  HC
Sbjct: 4464 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRRPRQVQGLQGKKVIAIATGSLHC 4520

Query: 111  VAVTEGGEVYTWG 123
            V  TE GEVYTWG
Sbjct: 4521 VCCTEDGEVYTWG 4533


>gi|307107146|gb|EFN55390.1| hypothetical protein CHLNCDRAFT_57991 [Chlorella variabilis]
          Length = 596

 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 84/244 (34%), Positives = 119/244 (48%), Gaps = 27/244 (11%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
           R+ +VAAG  H++AL+  G+++ WG   +GQLG      ++  P+P P +   + +    
Sbjct: 328 RVVSVAAGRAHSVALAADGKIFTWGDASKGQLGHAQLAAVMQGPNPQP-LSIPFPQ---- 382

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQC--GQGSTDD 339
                ++ S  P    P   V  IA GG HS  +T AGALL FG   +GQ   G G T D
Sbjct: 383 -----AIQSLEPARLKPPARVTAIAAGGDHSMAVTVAGALLAFGSNKHGQARLGTGDTLD 437

Query: 340 ELSPNCVSSLLGIQIEG--------VAAGLWHTIC---ISSDGDVYAFGGNQFGQLGTGG 388
            + P  V   L ++ EG        V  G  HT+    +     V + GGN +G+LG G 
Sbjct: 438 RMIPTEVP--LALESEGGQLVRAMQVHCGAQHTLALVQVQGHHQVRSVGGNSYGELGLG- 494

Query: 389 DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNI 448
           D+ E   R    P+L+      VS G  H A I  DG+++ WG    GQLGLGD  +R  
Sbjct: 495 DRLER-HRFHPIPALKGKSIVCVSVGDWHNAAICQDGRLYVWGRGDCGQLGLGDDRNRWA 553

Query: 449 PSQV 452
           P Q+
Sbjct: 554 PKQL 557



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 76/277 (27%), Positives = 125/277 (45%), Gaps = 51/277 (18%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM-VSSPHPIPCIESSYGKDR 279
           + +A V+AG  H+ ++S  G+++ WG    G+LG G    + VS P  I  ++ +     
Sbjct: 221 IHLAVVSAGSSHSASISRRGELYTWGLASSGELGHGGWTPIEVSCPRMITSLQRTR---- 276

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDD 339
                                 +  ++CG  H+  I++ G L + G G +GQ G G   D
Sbjct: 277 ----------------------IVSVSCGANHTLAISETGQLWSCGRGRHGQLGHGHFHD 314

Query: 340 ELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG---------GDQ 390
           E     V ++   ++  VAAG  H++ +++DG ++ +G    GQLG             Q
Sbjct: 315 EGLLMLVDTIRHERVVSVAAGRAHSVALAADGKIFTWGDASKGQLGHAQLAAVMQGPNPQ 374

Query: 391 AETLPRLLDAPSLENVHSK------SVSCGARHTAVIADDGKVFCWGWNKYGQ--LGLGD 442
             ++P      SLE    K      +++ G  H+  +   G +  +G NK+GQ  LG GD
Sbjct: 375 PLSIPFPQAIQSLEPARLKPPARVTAIAAGGDHSMAVTVAGALLAFGSNKHGQARLGTGD 434

Query: 443 VIDRNIPSQVTIE-----GCVPR--NVACGWWHTLLL 472
            +DR IP++V +      G + R   V CG  HTL L
Sbjct: 435 TLDRMIPTEVPLALESEGGQLVRAMQVHCGAQHTLAL 471



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 96/386 (24%), Positives = 158/386 (40%), Gaps = 60/386 (15%)

Query: 36  VRLPLTVGSA---WRDVCGGGCGFAMAISDSRKLITWG--STDDLGQSYVTSGKHGEIPE 90
           V++PL  G+       V   G   + +IS   +L TWG  S+ +LG    T  +    P 
Sbjct: 209 VKVPLYQGAPDDIHLAVVSAGSSHSASISRRGELYTWGLASSGELGHGGWTPIE-VSCPR 267

Query: 91  PFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFER 150
                    IV  + G  H +A++E G++++ G       GR  G L  G   D+ +   
Sbjct: 268 MITSLQRTRIVSVSCGANHTLAISETGQLWSCG------RGR-HGQLGHGHFHDEGLL-- 318

Query: 151 QSSFLTEQVSPRSQVSRSSGGTSS---GTDGRGSGEEGSKRRRISLAKQTAESSSSGDEN 207
               L + +     VS ++G   S     DG+      + + ++  A+  A       + 
Sbjct: 319 ---MLVDTIRHERVVSVAAGRAHSVALAADGKIFTWGDASKGQLGHAQLAAVMQGPNPQP 375

Query: 208 LS-AFPCLVT------LNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQ--LGLGSR 258
           LS  FP  +       L P  R+  +AAGG H++A++  G +  +G    GQ  LG G  
Sbjct: 376 LSIPFPQAIQSLEPARLKPPARVTAIAAGGDHSMAVTVAGALLAFGSNKHGQARLGTGDT 435

Query: 259 I-RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKG--IACGGRHSAVI 315
           + RM+ +  P+                  ++ SEG      G  V+   + CG +H+  +
Sbjct: 436 LDRMIPTEVPL------------------ALESEG------GQLVRAMQVHCGAQHTLAL 471

Query: 316 TDA---GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGD 372
                   + + G   YG+ G G   +    + + +L G  I  V+ G WH   I  DG 
Sbjct: 472 VQVQGHHQVRSVGGNSYGELGLGDRLERHRFHPIPALKGKSIVCVSVGDWHNAAICQDGR 531

Query: 373 VYAFGGNQFGQLGTGGDQAETLPRLL 398
           +Y +G    GQLG G D+    P+ L
Sbjct: 532 LYVWGRGDCGQLGLGDDRNRWAPKQL 557



 Score = 43.9 bits (102), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 65/138 (47%), Gaps = 21/138 (15%)

Query: 357 VAAGLWHTICI-------SSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLE----- 404
           +A G +HT+ +       + +  +YA G    GQLG      +  P+ + A   +     
Sbjct: 154 IALGTYHTVGLLCQPEQAAPEYAMYAMGRGFHGQLGLEQFDNQEQPQRVGAVERDVKVPL 213

Query: 405 ------NVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG--DVIDRNIPSQVT-IE 455
                 ++H   VS G+ H+A I+  G+++ WG    G+LG G    I+ + P  +T ++
Sbjct: 214 YQGAPDDIHLAVVSAGSSHSASISRRGELYTWGLASSGELGHGGWTPIEVSCPRMITSLQ 273

Query: 456 GCVPRNVACGWWHTLLLA 473
                +V+CG  HTL ++
Sbjct: 274 RTRIVSVSCGANHTLAIS 291


>gi|224134180|ref|XP_002321756.1| predicted protein [Populus trichocarpa]
 gi|222868752|gb|EEF05883.1| predicted protein [Populus trichocarpa]
          Length = 390

 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 80/268 (29%), Positives = 120/268 (44%), Gaps = 34/268 (12%)

Query: 205 DENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSS 264
           DE L     L  L+    I+T+A GG H +AL+  G+V+ WG G  GQLG G    M++S
Sbjct: 34  DEYLPQLLHLPFLSSAESISTLACGGAHVIALTSGGRVFTWGRGTTGQLGHG---EMLNS 90

Query: 265 PHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTF 324
            HP P                           +    +  ++ G  HS  ++D G L T 
Sbjct: 91  LHPKPVSS------------------------LQSCVITHVSAGWSHSGFVSDIGLLFTC 126

Query: 325 GWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQL 384
           G G +GQ GQG+   + +P  V       +  +A G+ H++ + +   VY FG  + GQL
Sbjct: 127 GDGSFGQLGQGNYRSQSTPVKVDYFANNFVNQIACGMRHSLVLLNGNQVYGFGSGKRGQL 186

Query: 385 GTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVI 444
           G   D+ +++        LE+V   S+S    H+A I+ DG ++ WG       G     
Sbjct: 187 GISRDKTKSINLPQVTCGLEDVQIVSISANGDHSAAISADGHLYTWG------RGFAGAS 240

Query: 445 DRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           D N P Q+++        A GW H LLL
Sbjct: 241 DANFP-QLSLSSLRCTKAALGWNHGLLL 267



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/104 (36%), Positives = 59/104 (56%), Gaps = 2/104 (1%)

Query: 368 SSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS-VSCGARHTAVIADDGK 426
           S    ++++G    GQLGTG  + E LP+LL  P L +  S S ++CG  H   +   G+
Sbjct: 11  SKQQQIWSWGAGTEGQLGTGKLEDEYLPQLLHLPFLSSAESISTLACGGAHVIALTSGGR 70

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
           VF WG    GQLG G++++   P  V +++ CV  +V+ GW H+
Sbjct: 71  VFTWGRGTTGQLGHGEMLNSLHPKPVSSLQSCVITHVSAGWSHS 114



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 85/351 (24%), Positives = 142/351 (40%), Gaps = 59/351 (16%)

Query: 33  PLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWG--STDDLGQSYVTSGKHGEIPE 90
           P ++ LP    +        G    +A++   ++ TWG  +T  LG   + +  H   P+
Sbjct: 38  PQLLHLPFLSSAESISTLACGGAHVIALTSGGRVFTWGRGTTGQLGHGEMLNSLH---PK 94

Query: 91  PFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFER 150
           P        I   +AGW+H   V++ G ++T G          FG L  G    +    +
Sbjct: 95  PVSSLQSCVITHVSAGWSHSGFVSDIGLLFTCG-------DGSFGQLGQGNYRSQSTPVK 147

Query: 151 QSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSA 210
              F    V+  +   R S    +G    G G    KR ++ +++   +S      NL  
Sbjct: 148 VDYFANNFVNQIACGMRHSLVLLNGNQVYGFGS--GKRGQLGISRDKTKSI-----NLPQ 200

Query: 211 FPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEG-------QLGLGSRIR--- 260
             C +     V+I +++A G H+ A+S  G ++ WG G  G       QL L S +R   
Sbjct: 201 VTCGL---EDVQIVSISANGDHSAAISADGHLYTWGRGFAGASDANFPQLSL-SSLRCTK 256

Query: 261 ---------MVSSPHPIPCIESSY-----GKDRSAALSRGSVNSEGPGFR----VPGNYV 302
                    +++    +  +  +Y       ++ +A+     +S G        + G  V
Sbjct: 257 AALGWNHGLLLTGDEEVLMLGGNYHGVLCDLEKMSAVKHRPEDSPGTALNEVIGLDGVKV 316

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ 353
             IA G  HSA        LT+GWG +GQ G G+T+D+  P  VS +  IQ
Sbjct: 317 VKIAAGAEHSA--------LTWGWGEHGQLGLGNTNDQTIPQTVSLIPDIQ 359


>gi|218196711|gb|EEC79138.1| hypothetical protein OsI_19792 [Oryza sativa Indica Group]
          Length = 1385

 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 98/171 (57%), Gaps = 4/171 (2%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ I+CGGRH+ ++T  G + ++G    G+ G G   D   P  + +L  + IE VA G 
Sbjct: 357 VQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALANMNIELVACGE 416

Query: 362 WHTICISSDGDVYAFGG--NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
           +HT  ++  GD+Y +G   +  G LG G + +  +P+ ++ P LE +H  ++SCG  HTA
Sbjct: 417 YHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGP-LEGIHVSAISCGPWHTA 475

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
           ++   G++F +G   +G LG GD    ++P +V +++G      ACG WHT
Sbjct: 476 IVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHT 526



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 74/268 (27%), Positives = 121/268 (45%), Gaps = 42/268 (15%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G+ ++ ++ G  HT  ++  GQ++ +G G  G LG G R + +S P  +  ++       
Sbjct: 461 GIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDR-QSLSVPREVESLK------- 512

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDA------------GALLTFGWG 327
                         G R     V+  ACG  H+A + +             G + T+G G
Sbjct: 513 --------------GLRT----VRA-ACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDG 553

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG 387
             G+ G G  D  L P CV++L+      +A G   T+ +++ G VY  G   +GQLG  
Sbjct: 554 DKGRLGHGDKDTRLVPTCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLG-- 611

Query: 388 GDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
             QA+ +  +     L     + +SCGA H AV+    +V+ WG    G+LG GD  DR+
Sbjct: 612 NPQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRS 671

Query: 448 IPSQV-TIEGCVPRNVACGWWHTLLLAV 474
            P+ V +++    R V CG   T  + +
Sbjct: 672 SPTLVESLKDKQVRTVVCGINFTAAICI 699



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 75/270 (27%), Positives = 122/270 (45%), Gaps = 49/270 (18%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  ++ GGRH   ++  G+++ WG    G+LG G     V    P P +  +        
Sbjct: 357 VQNISCGGRHATLVTKQGEIYSWGEESGGRLGHG-----VDCDVPQPKLIDAL------- 404

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTDDE 340
               ++N            ++ +ACG  H+  +T +G L T+G G    G  G G+    
Sbjct: 405 ---ANMN------------IELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSH 449

Query: 341 LSPNCVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLD 399
             P  V+  L GI +  ++ G WHT  ++S G ++ FG   FG LG G  Q+ ++PR ++
Sbjct: 450 WVPKRVNGPLEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVE 509

Query: 400 APSLENVHSKSVSCGARHTAVIAD------------DGKVFCWGWNKYGQLGLGDVIDRN 447
             SL+ + +   +CG  HTA + +             GK+F WG    G+LG GD   R 
Sbjct: 510 --SLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRL 567

Query: 448 IPSQVTIEGCVPRN---VACGWWHTLLLAV 474
           +P+   +   V  N   +ACG   T+ L  
Sbjct: 568 VPT--CVAALVEPNFCQIACGHCMTVALTT 595



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 73/138 (52%), Gaps = 6/138 (4%)

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D L P  +   + + ++ ++ G  H   ++  G++Y++G    G+LG G D     P+L+
Sbjct: 342 DCLIPKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLI 401

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCW--GWNKYGQLGLGDVIDRNIPSQVT--I 454
           DA  L N++ + V+CG  HT  +   G ++ W  G +  G LG G+ +   +P +V   +
Sbjct: 402 DA--LANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPL 459

Query: 455 EGCVPRNVACGWWHTLLL 472
           EG     ++CG WHT ++
Sbjct: 460 EGIHVSAISCGPWHTAIV 477


>gi|212721370|ref|NP_001132850.1| uncharacterized protein LOC100194342 [Zea mays]
 gi|194695574|gb|ACF81871.1| unknown [Zea mays]
 gi|413924971|gb|AFW64903.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 418

 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 117/402 (29%), Positives = 175/402 (43%), Gaps = 73/402 (18%)

Query: 91  PFPLPTEASI-VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFE 149
           PF L   A      A G AH + +T+ G V+  G  +       FG L  GT +   +  
Sbjct: 56  PFFLARAADPPASLACGGAHTLFLTQNGRVFATGLND-------FGQLGIGTSVTHMLEP 108

Query: 150 RQSSFLTEQVSPRSQVSRSSGGTSSGTD----GRGSGEEGSKRRRISLAKQTAESSSSGD 205
            + S   E+V   S  +  S   ++       GR SG +      + L K   +  S+  
Sbjct: 109 VEISGFHERVVEVSAGNHHSCAVTADGKLFVWGRNSGGQ------LGLGKGAGKVVST-- 160

Query: 206 ENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSP 265
                 P  V     +R+ TVA G  H++A+++ G+V  WG  G G+LG G         
Sbjct: 161 ------PTKVDCLTDLRVKTVALGSEHSIAVTEEGEVLSWGAAGSGRLGHG--------- 205

Query: 266 HPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNY----VKGIACGGRHSAVITDAGAL 321
                        R +++   S+ S     R+  N+    +K IA G  HSA I + G L
Sbjct: 206 -------------RQSSILGFSLTSTEYTPRLIKNFDGIKIKKIAAGMLHSACIDEKGTL 252

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             FG     + G G  ++E  PN V  +     E VA G +HT  ++  GD+Y++G N+ 
Sbjct: 253 FIFGQKT--EKGFGRPNEEFRPNIVEEI--PFSEEVACGGYHTCVVTDSGDLYSWGSNEN 308

Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGW--------- 432
           G LG GG      P +L + SL  +    VSCG +HTAV++ D  ++ WGW         
Sbjct: 309 GCLGLGGTDMVRSPEILKS-SLFKLPVSKVSCGWKHTAVVSGD-DIYTWGWGGANGTFFE 366

Query: 433 ---NKYGQLGLGDVIDRNIPSQVTIEGCVPR--NVACGWWHT 469
              +  GQLG G+ +D   P  V   G   R  +V+CG+ HT
Sbjct: 367 EGHSSGGQLGHGNDVDYFEPMMVPF-GTNARAVHVSCGFNHT 407



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 86/288 (29%), Positives = 134/288 (46%), Gaps = 44/288 (15%)

Query: 224 ATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP-----CIESSYGKD 278
           A++A GG HTL L+  G+V+  G    GQLG+G+ +  +  P  I       +E S G  
Sbjct: 67  ASLACGGAHTLFLTQNGRVFATGLNDFGQLGIGTSVTHMLEPVEISGFHERVVEVSAGNH 126

Query: 279 RSAALS---------RGSVNSEGPG------FRVPGNY-------VKGIACGGRHSAVIT 316
            S A++         R S    G G         P          VK +A G  HS  +T
Sbjct: 127 HSCAVTADGKLFVWGRNSGGQLGLGKGAGKVVSTPTKVDCLTDLRVKTVALGSEHSIAVT 186

Query: 317 DAGALLTFGWGLYGQCGQGS---------TDDELSPNCVSSLLGIQIEGVAAGLWHTICI 367
           + G +L++G    G+ G G          T  E +P  + +  GI+I+ +AAG+ H+ CI
Sbjct: 187 EEGEVLSWGAAGSGRLGHGRQSSILGFSLTSTEYTPRLIKNFDGIKIKKIAAGMLHSACI 246

Query: 368 SSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKV 427
              G ++ FG  Q  + G G    E  P +++    E   S+ V+CG  HT V+ D G +
Sbjct: 247 DEKGTLFIFG--QKTEKGFGRPNEEFRPNIVE----EIPFSEEVACGGYHTCVVTDSGDL 300

Query: 428 FCWGWNKYGQLGLG--DVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           + WG N+ G LGLG  D++      + ++       V+CGW HT +++
Sbjct: 301 YSWGSNENGCLGLGGTDMVRSPEILKSSLFKLPVSKVSCGWKHTAVVS 348



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 114/447 (25%), Positives = 174/447 (38%), Gaps = 85/447 (19%)

Query: 11  ERVVFMWGYLP------GALPQR-SPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDS 63
           +RV  +WG         G+L  R SP + P    L           CGG     + ++ +
Sbjct: 27  QRVAALWGNGDYGRLGLGSLESRWSPTVCPFF--LARAADPPASLACGGA--HTLFLTQN 82

Query: 64  RKLITWGSTDDLGQSYV-TSGKHGEIPEPFPLP-TEASIVKAAAGWAHCVAVTEGGEVYT 121
            ++   G  +D GQ  + TS  H  + EP  +      +V+ +AG  H  AVT  G+++ 
Sbjct: 83  GRVFATG-LNDFGQLGIGTSVTH--MLEPVEISGFHERVVEVSAGNHHSCAVTADGKLFV 139

Query: 122 WGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGR-- 179
           WG      SG   G L  G G  K V           +  ++    S    +   +G   
Sbjct: 140 WGRN----SG---GQLGLGKGAGKVVSTPTKVDCLTDLRVKTVALGSEHSIAVTEEGEVL 192

Query: 180 -----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTL 234
                GSG  G  R+   L      +  +        P L+    G++I  +AAG  H+ 
Sbjct: 193 SWGAAGSGRLGHGRQSSILGFSLTSTEYT--------PRLIKNFDGIKIKKIAAGMLHSA 244

Query: 235 ALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPG 294
            + + G ++ +G   E   G                        R     R ++  E P 
Sbjct: 245 CIDEKGTLFIFGQKTEKGFG------------------------RPNEEFRPNIVEEIP- 279

Query: 295 FRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCV-SSLLGIQ 353
                 + + +ACGG H+ V+TD+G L ++G    G  G G TD   SP  + SSL  + 
Sbjct: 280 ------FSEEVACGGYHTCVVTDSGDLYSWGSNENGCLGLGGTDMVRSPEILKSSLFKLP 333

Query: 354 IEGVAAGLWHTICISSDGDVYAFG-----GNQF-------GQLGTGGDQAETLPRLLDAP 401
           +  V+ G  HT  +S D D+Y +G     G  F       GQLG G D     P ++  P
Sbjct: 334 VSKVSCGWKHTAVVSGD-DIYTWGWGGANGTFFEEGHSSGGQLGHGNDVDYFEPMMV--P 390

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVF 428
              N  +  VSCG  HT  I +  + F
Sbjct: 391 FGTNARAVHVSCGFNHTGAIYECSEDF 417



 Score = 40.8 bits (94), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 16/94 (17%)

Query: 377 GGNQFGQLGTGGDQAE--------TLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVF 428
           G   +G+LG G  ++          L R  D P+       S++CG  HT  +  +G+VF
Sbjct: 34  GNGDYGRLGLGSLESRWSPTVCPFFLARAADPPA-------SLACGGAHTLFLTQNGRVF 86

Query: 429 CWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNV 462
             G N +GQLG+G  +   +   V I G   R V
Sbjct: 87  ATGLNDFGQLGIGTSVTHML-EPVEISGFHERVV 119


>gi|28874834|emb|CAC84086.1| ZR1 protein [Medicago sativa]
          Length = 1035

 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 89/304 (29%), Positives = 137/304 (45%), Gaps = 44/304 (14%)

Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM-VSSPHP 267
           S  P L+     + +  VA GG H   ++  G+V+ WG G  G+LG   RI M +SSP  
Sbjct: 292 SLVPKLLESTAMLDVQNVALGGNHAAIVTKQGEVYCWGQGKCGRLG--QRIDMDISSPKI 349

Query: 268 IPCIES-----------------------SYGKDRSAAL-SRGSVNSE--GPGFRVP--G 299
           +  +                         ++GKD  + L   G + S+     F +P  G
Sbjct: 350 VDSLSDIRVKKVACGEYHTCALTDSGDVYTWGKDSCSDLVDEGRIRSQWLTHKFSLPVEG 409

Query: 300 NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAA 359
             +  IACG  H+A+++  G L T+G G +G  G G+     SP  V SL G+ +  VA 
Sbjct: 410 ISISSIACGEWHTAIVSSCGRLFTYGDGTFGVLGHGNYHSFSSPKEVESLKGLCVRSVAC 469

Query: 360 GLWHTICI-----------SSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHS 408
           G WHT  I           +S G ++ +G    G+LG   +  + +P  +    L +   
Sbjct: 470 GTWHTAAIIEVSAERFKYNTSTGKLFTWGDADEGRLGHADNVNKLVPTCVS--QLVDYDF 527

Query: 409 KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWH 468
             VSCG   T  + + GKVF  G  KYGQLG   V DR +  +  ++    + ++CG +H
Sbjct: 528 VQVSCGRMMTLALTNMGKVFAMGSAKYGQLGNPHVKDRAVVVEGMLKQEYVKMISCGSYH 587

Query: 469 TLLL 472
             +L
Sbjct: 588 VAVL 591



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 85/285 (29%), Positives = 123/285 (43%), Gaps = 46/285 (16%)

Query: 205 DENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSS 264
           D ++S+ P +V     +R+  VA G  HT AL+D G V+ WG      L    RIR    
Sbjct: 341 DMDISS-PKIVDSLSDIRVKKVACGEYHTCALTDSGDVYTWGKDSCSDLVDEGRIRSQWL 399

Query: 265 PHP------------IPCIE------------SSYGKDRSAALSRGSVNSEGPGFRV--- 297
            H             I C E             +YG      L  G+ +S      V   
Sbjct: 400 THKFSLPVEGISISSIACGEWHTAIVSSCGRLFTYGDGTFGVLGHGNYHSFSSPKEVESL 459

Query: 298 PGNYVKGIACGGRHSAVI-----------TDAGALLTFGWGLYGQCGQGSTDDELSPNCV 346
            G  V+ +ACG  H+A I           T  G L T+G    G+ G     ++L P CV
Sbjct: 460 KGLCVRSVACGTWHTAAIIEVSAERFKYNTSTGKLFTWGDADEGRLGHADNVNKLVPTCV 519

Query: 347 SSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG--GDQAETLPRLLDAPSLE 404
           S L+      V+ G   T+ +++ G V+A G  ++GQLG     D+A  +  +L      
Sbjct: 520 SQLVDYDFVQVSCGRMMTLALTNMGKVFAMGSAKYGQLGNPHVKDRAVVVEGMLKQE--- 576

Query: 405 NVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIP 449
             + K +SCG+ H AV+   G V+ WG  + G+LGLGD  +R  P
Sbjct: 577 --YVKMISCGSYHVAVLTSSGSVYTWGKGENGELGLGDTENRYTP 619



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 72/141 (51%), Gaps = 15/141 (10%)

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
           L P  + S   + ++ VA G  H   ++  G+VY +G  + G+LG   D   + P+++D 
Sbjct: 293 LVPKLLESTAMLDVQNVALGGNHAAIVTKQGEVYCWGQGKCGRLGQRIDMDISSPKIVD- 351

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR-NIPSQ-------V 452
            SL ++  K V+CG  HT  + D G V+ WG +        D++D   I SQ       +
Sbjct: 352 -SLSDIRVKKVACGEYHTCALTDSGDVYTWGKD-----SCSDLVDEGRIRSQWLTHKFSL 405

Query: 453 TIEGCVPRNVACGWWHTLLLA 473
            +EG    ++ACG WHT +++
Sbjct: 406 PVEGISISSIACGEWHTAIVS 426



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 70/145 (48%), Gaps = 28/145 (19%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
              V+ G   TLAL+++G+V+  G    GQLG         +PH          KDR A 
Sbjct: 527 FVQVSCGRMMTLALTNMGKVFAMGSAKYGQLG---------NPHV---------KDR-AV 567

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
           +  G +  E         YVK I+CG  H AV+T +G++ T+G G  G+ G G T++  +
Sbjct: 568 VVEGMLKQE---------YVKMISCGSYHVAVLTSSGSVYTWGKGENGELGLGDTENRYT 618

Query: 343 PNCVSSLLGIQIEGVAAGLWHTICI 367
           P  V +L   Q++ +  G   T+ I
Sbjct: 619 PCFVEALRDRQVDTITCGPSFTVAI 643



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 80/349 (22%), Positives = 137/349 (39%), Gaps = 68/349 (19%)

Query: 89  PEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKEC---VPSGRVFGDLSTGTGLDK 145
           P+     ++  + K A G  H  A+T+ G+VYTWG   C   V  GR+            
Sbjct: 347 PKIVDSLSDIRVKKVACGEYHTCALTDSGDVYTWGKDSCSDLVDEGRI------------ 394

Query: 146 DVFERQSSFLTEQVS-PRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSG 204
                +S +LT + S P   +S SS           S    S  R  +    T      G
Sbjct: 395 -----RSQWLTHKFSLPVEGISISSIACGEWHTAIVS----SCGRLFTYGDGTFGVLGHG 445

Query: 205 DENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDI-----------GQVWGWGYGGEGQL 253
           + +  + P  V    G+ + +VA G  HT A+ ++           G+++ WG   EG+L
Sbjct: 446 NYHSFSSPKEVESLKGLCVRSVACGTWHTAAIIEVSAERFKYNTSTGKLFTWGDADEGRL 505

Query: 254 GLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSA 313
           G    +  +     +P   S                       V  ++V+ ++CG   + 
Sbjct: 506 GHADNVNKL-----VPTCVSQL---------------------VDYDFVQ-VSCGRMMTL 538

Query: 314 VITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ-IEGVAAGLWHTICISSDGD 372
            +T+ G +   G   YGQ G     D      V  +L  + ++ ++ G +H   ++S G 
Sbjct: 539 ALTNMGKVFAMGSAKYGQLGNPHVKDRAV--VVEGMLKQEYVKMISCGSYHVAVLTSSGS 596

Query: 373 VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
           VY +G  + G+LG G  +    P  ++A  L +    +++CG   T  I
Sbjct: 597 VYTWGKGENGELGLGDTENRYTPCFVEA--LRDRQVDTITCGPSFTVAI 643


>gi|444516741|gb|ELV11274.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
          Length = 894

 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 83/266 (31%), Positives = 131/266 (49%), Gaps = 30/266 (11%)

Query: 212 PCLVTLNPGVRIATVAA--GGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP 269
           P LV       I  +AA   G H LAL+  G+V+ WG G  G+LG G  +     P   P
Sbjct: 527 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEP 581

Query: 270 CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
            + S++   ++                  G +V  IACG  +SA IT  G L T+G G Y
Sbjct: 582 KVISAFSGKQA------------------GKHVVHIACGSTYSAAITAEGELYTWGRGNY 623

Query: 330 GQCGQGSTDDELSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTG 387
           G+ G GS++DE  P  V+ L G+++  VA  +G   T+ ++ +G V+++G   +G+LG G
Sbjct: 624 GRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTDNGQVWSWGDGDYGKLGRG 683

Query: 388 GDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
           G      P+L++   L+++    V CG++ +  +  DG+V+ WG     +LG G      
Sbjct: 684 GSDGCKTPKLIE--KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR 741

Query: 448 IPSQVT-IEGCVPRNVACGWWHTLLL 472
            P  +  ++G    +VA G  H L L
Sbjct: 742 YPKLLEGLQGKKVIDVAAGSTHCLAL 767



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 92/217 (42%), Gaps = 38/217 (17%)

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
           SS DE   A P LV    G+++  VA  +G   TLA++D GQVW WG G  G+LG G   
Sbjct: 630 SSEDE---AIPMLVAGLKGLKVIDVACGSGDAQTLAVTDNGQVWSWGDGDYGKLGRG--- 683

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITD 317
                                     GS   + P    ++    V  + CG + S  +T 
Sbjct: 684 --------------------------GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTK 717

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
            G + ++G G   + G G+ +    P  +  L G ++  VAAG  H + ++ D +V+++G
Sbjct: 718 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 777

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
            N   Q         T P     P L+  H   ++CG
Sbjct: 778 SND--QCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 812


>gi|332243760|ref|XP_003271040.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Nomascus
           leucogenys]
          Length = 814

 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 97/297 (32%), Positives = 139/297 (46%), Gaps = 43/297 (14%)

Query: 213 CLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR--------IRMVSS 264
           C+  L P  ++   A G  HTL  ++ G V+  G   EGQLGLG          I   +S
Sbjct: 80  CVKALKPE-KVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTS 138

Query: 265 PHPIPCIESSYGKDRSAALSRGSV------NSEG------------PGFRVPGNYVKGIA 306
            H I  +  S G + SAAL+          NSEG            P     G  V  I+
Sbjct: 139 EHKIKQL--SAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVTNVCVPQQVTIGKPVSWIS 196

Query: 307 CGGRHSAVITDAGALLTFGWGLYGQCGQGST--DDELSPNCVSSLLGIQIEGVAAGLWHT 364
           CG  HSA +T  G L  FG    G+ G  +    +  +P  VS +    I+ VA G  HT
Sbjct: 197 CGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVIQ-VACGGEHT 255

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVS---CGARHTAVI 421
           + ++ +  VY FG  QFGQLG G    ET     D   +EN+  +++S   CG  HTA+I
Sbjct: 256 VVLTENA-VYTFGLGQFGQLGLGTFLFETS----DPKVIENIRDQTISYISCGESHTALI 310

Query: 422 ADDGKVFCWGWNKYGQLGLG--DVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLAVP 475
            D G ++ +G  ++G+LGLG  +  +  IP+  +     + + VACG  H ++ A P
Sbjct: 311 TDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFSRFIVKLVACGGCHMVVFAAP 367



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 60/170 (35%), Positives = 93/170 (54%), Gaps = 2/170 (1%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           ++CG  HSAV+T    L  FG   +GQ G GS      P CV +L   +++  A G  HT
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHT 99

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           +  +  G+VYA GGN  GQLG G  +      ++   + E+   K +S G+  +A + +D
Sbjct: 100 LVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEH-KIKQLSAGSNTSAALTED 158

Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAV 474
           G++F WG N  GQ+GL +V +  +P QVTI   V   ++CG++H+  +  
Sbjct: 159 GRLFMWGDNSEGQIGLKNVTNVCVPQQVTIGKPVSW-ISCGYYHSAFVTT 207



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 89/328 (27%), Positives = 139/328 (42%), Gaps = 62/328 (18%)

Query: 103 AAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPR 162
           AA G  H +  TEGG VY  G       G   G L  G   +++ F   S F +E     
Sbjct: 92  AACGRNHTLVSTEGGNVYATG-------GNNEGQLGLGDTEERNTFHVISFFTSEH--KI 142

Query: 163 SQVSRSSGGTSSGT-DGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTL 217
            Q+S  S  +++ T DGR    G   EG    +I L   T              P  VT+
Sbjct: 143 KQLSAGSNTSAALTEDGRLFMWGDNSEG----QIGLKNVTN----------VCVPQQVTI 188

Query: 218 NPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
             G  ++ ++ G  H+  ++  G+++ +G    G+LGL +++                G 
Sbjct: 189 --GKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQL---------------LGN 231

Query: 278 DRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST 337
            R+  L             +P   ++ +ACGG H+ V+T+  A+ TFG G +GQ G G+ 
Sbjct: 232 HRTPQLVS----------EIPEKVIQ-VACGGEHTVVLTE-NAVYTFGLGQFGQLGLGTF 279

Query: 338 DDELS-PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAET--L 394
             E S P  + ++    I  ++ G  HT  I+  G +Y FG  + G+LG G +      +
Sbjct: 280 LFETSDPKVIENIRDQTISYISCGESHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFI 339

Query: 395 PRLLDAPSLENVHSKSVSCGARHTAVIA 422
           P L    +      K V+CG  H  V A
Sbjct: 340 PTL--CSNFSRFIVKLVACGGCHMVVFA 365



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/279 (23%), Positives = 126/279 (45%), Gaps = 38/279 (13%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIE------SSYGKDR 279
           ++ G  H+  ++   +++ +G    GQLGLGS+   VS P  +  ++      ++ G++ 
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSK-SAVSKPTCVKALKPEKVKLAACGRNH 98

Query: 280 SAALSRGSV------NSEGP---------------GFRVPGNYVKGIACGGRHSAVITDA 318
           +   + G        N+EG                 F    + +K ++ G   SA +T+ 
Sbjct: 99  TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTED 158

Query: 319 GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           G L  +G    GQ G  +  +   P  V+  +G  +  ++ G +H+  +++DG++Y FG 
Sbjct: 159 GRLFMWGDNSEGQIGLKNVTNVCVPQQVT--IGKPVSWISCGYYHSAFVTTDGELYVFGE 216

Query: 379 NQFGQLGTGGDQ--AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYG 436
            + G+LG           P+L+     + +    V+CG  HT V+ ++  V+ +G  ++G
Sbjct: 217 PENGKLGLPNQLLGNHRTPQLVSEIPEKVIQ---VACGGEHTVVLTENA-VYTFGLGQFG 272

Query: 437 QLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLA 473
           QLGLG  +      +V   I       ++CG  HT L+ 
Sbjct: 273 QLGLGTFLFETSDPKVIENIRDQTISYISCGESHTALIT 311


>gi|397599967|gb|EJK57568.1| hypothetical protein THAOC_22376, partial [Thalassiosira oceanica]
          Length = 657

 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 80/260 (30%), Positives = 133/260 (51%), Gaps = 29/260 (11%)

Query: 240 GQVWGWGYGGEGQLGLGSR-----IRMVSSPHPIPCIESSYGKDRSAAL-SRGSVNSEGP 293
           G V+ WG G +G+LG G        R+  S         + G   +AA+ S+G++ + G 
Sbjct: 26  GGVYTWGRGDDGRLGHGDNGWKYVPRLTHSLAGQVITHVTCGSYHTAAVSSKGNLFTWGG 85

Query: 294 GFR-------------------VPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
           G                     + G  V  IACG RH+A++T  G L T+G    G  G 
Sbjct: 86  GMYGKLGHGNESGHSTPKRVDSLVGLAVVDIACGSRHTAIVTSRGCLYTWGDKENGVAGH 145

Query: 335 GSTD-DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAET 393
           G T+  + +P  +  L G ++  ++A  +HT C++  G+VY +G  +FG+LG G ++   
Sbjct: 146 GDTEGHQYTPKLLERLSGKRVVQLSACGFHTGCLTDAGEVYTWGEGKFGRLGHGAERNCH 205

Query: 394 LPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT 453
            PRL++  +L       +SCG  H+AV+  DGK++ +G  ++GQLG GD +++  P+ V 
Sbjct: 206 SPRLVE--TLLGKRPVQISCGGFHSAVVTADGKMYTFGGGEHGQLGHGDKVNKVKPTLVK 263

Query: 454 -IEGCVPRNVACGWWHTLLL 472
            ++G     + CGW H++ L
Sbjct: 264 DLDGVFLTQITCGWSHSVAL 283



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 82/287 (28%), Positives = 135/287 (47%), Gaps = 30/287 (10%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLG-----SR 258
           GD      P L     G  I  V  G  HT A+S  G ++ WG G  G+LG G     S 
Sbjct: 42  GDNGWKYVPRLTHSLAGQVITHVTCGSYHTAAVSSKGNLFTWGGGMYGKLGHGNESGHST 101

Query: 259 IRMVSSPHPIPCIESSYGKDRSAAL-SRGSV--------------NSEGPGF------RV 297
            + V S   +  ++ + G   +A + SRG +              ++EG  +      R+
Sbjct: 102 PKRVDSLVGLAVVDIACGSRHTAIVTSRGCLYTWGDKENGVAGHGDTEGHQYTPKLLERL 161

Query: 298 PGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGV 357
            G  V  ++  G H+  +TDAG + T+G G +G+ G G+  +  SP  V +LLG +   +
Sbjct: 162 SGKRVVQLSACGFHTGCLTDAGEVYTWGEGKFGRLGHGAERNCHSPRLVETLLGKRPVQI 221

Query: 358 AAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARH 417
           + G +H+  +++DG +Y FGG + GQLG G    +  P L+    L+ V    ++CG  H
Sbjct: 222 SCGGFHSAVVTADGKMYTFGGGEHGQLGHGDKVNKVKPTLVK--DLDGVFLTQITCGWSH 279

Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVAC 464
           +  +    +V+ WG   +G+LG G    + + +   +E  V + V C
Sbjct: 280 SVALTSSHEVYTWGNGDHGKLGHG--CGKKVSTPQLVEKLVGQKVVC 324



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 89/331 (26%), Positives = 138/331 (41%), Gaps = 53/331 (16%)

Query: 100 IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQV 159
           I     G  H  AV+  G ++TWG       G ++G L  G        +R  S +   V
Sbjct: 61  ITHVTCGSYHTAAVSSKGNLFTWG-------GGMYGKLGHGNESGHSTPKRVDSLVGLAV 113

Query: 160 SPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
              +  SR +   +S       G+           K+   +     E     P L+    
Sbjct: 114 VDIACGSRHTAIVTSRGCLYTWGD-----------KENGVAGHGDTEGHQYTPKLLERLS 162

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G R+  ++A G HT  L+D G+V+ WG G  G+LG G+  R   SP     +E+  GK  
Sbjct: 163 GKRVVQLSACGFHTGCLTDAGEVYTWGEGKFGRLGHGAE-RNCHSPR---LVETLLGKRP 218

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDD 339
                                    I+CGG HSAV+T  G + TFG G +GQ G G   +
Sbjct: 219 VQ-----------------------ISCGGFHSAVVTADGKMYTFGGGEHGQLGHGDKVN 255

Query: 340 ELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLD 399
           ++ P  V  L G+ +  +  G  H++ ++S  +VY +G    G+LG G  +  + P+L  
Sbjct: 256 KVKPTLVKDLDGVFLTQITCGWSHSVALTSSHEVYTWGNGDHGKLGHGCGKKVSTPQL-- 313

Query: 400 APSLENVHSKSVSCGA---RHTAVIADDGKV 427
              +E +  + V C A    HTA + +   V
Sbjct: 314 ---VEKLVGQKVVCVASYNEHTACLVEPHSV 341



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 68/127 (53%), Gaps = 2/127 (1%)

Query: 316 TDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYA 375
           T  G + T+G G  G+ G G    +  P    SL G  I  V  G +HT  +SS G+++ 
Sbjct: 23  THGGGVYTWGRGDDGRLGHGDNGWKYVPRLTHSLAGQVITHVTCGSYHTAAVSSKGNLFT 82

Query: 376 FGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKY 435
           +GG  +G+LG G +   + P+ +D  SL  +    ++CG+RHTA++   G ++ WG  + 
Sbjct: 83  WGGGMYGKLGHGNESGHSTPKRVD--SLVGLAVVDIACGSRHTAIVTSRGCLYTWGDKEN 140

Query: 436 GQLGLGD 442
           G  G GD
Sbjct: 141 GVAGHGD 147



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 74/270 (27%), Positives = 112/270 (41%), Gaps = 46/270 (17%)

Query: 37  RLPLTVGSAWRDVCGGGCGFAMAISDSRK-LITWGSTDDLGQSYVTSGKHGEIPEPFPLP 95
           R+   VG A  D+  G      AI  SR  L TWG  ++    +  +  H   P+     
Sbjct: 104 RVDSLVGLAVVDIACGS--RHTAIVTSRGCLYTWGDKENGVAGHGDTEGHQYTPKLLERL 161

Query: 96  TEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFL 155
           +   +V+ +A   H   +T+ GEVYTWG  +       FG L  G G +++     S  L
Sbjct: 162 SGKRVVQLSACGFHTGCLTDAGEVYTWGEGK-------FGRL--GHGAERNC---HSPRL 209

Query: 156 TEQVSPRSQVSRSSGGTSSGT---DGR----GSGEEGSKRRRISLAKQTAESSSSGDENL 208
            E +  +  V  S GG  S     DG+    G GE G                  GD+  
Sbjct: 210 VETLLGKRPVQISCGGFHSAVVTADGKMYTFGGGEHGQL--------------GHGDKVN 255

Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSP--- 265
              P LV    GV +  +  G  H++AL+   +V+ WG G  G+LG G   + VS+P   
Sbjct: 256 KVKPTLVKDLDGVFLTQITCGWSHSVALTSSHEVYTWGNGDHGKLGHGCG-KKVSTPQLV 314

Query: 266 -----HPIPCIESSYGKDRSAALSRGSVNS 290
                  + C+ +SY +  +  +   SVN+
Sbjct: 315 EKLVGQKVVCV-ASYNEHTACLVEPHSVNA 343


>gi|449484061|ref|XP_002195626.2| PREDICTED: RCC1 and BTB domain-containing protein 2 [Taeniopygia
           guttata]
          Length = 526

 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 80/253 (31%), Positives = 129/253 (50%), Gaps = 31/253 (12%)

Query: 220 GVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
           G +IA ++ G G H +  ++ G+V+ WG+    QLG G+     ++   +PC        
Sbjct: 73  GKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGT-----TNHGFVPC-------- 119

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
               +S   VN +          V  +ACG  HS V+T  G + T+G+   GQ G GST 
Sbjct: 120 ---QVSTNLVNKK----------VIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTA 166

Query: 339 DELSPNCVSSLLGIQIE-GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
           ++  P  V+S L  +I   +A G   ++ +  +G+VY +G N  GQLG G    +  P  
Sbjct: 167 NQPIPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGSSGNQPTPCR 226

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE-G 456
           + A  L+ +  + V+CG  HT V+ D+G+++ WG N YGQLG G+  +++ P+ V ++  
Sbjct: 227 IAA--LQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTTVVVDKD 284

Query: 457 CVPRNVACGWWHT 469
            V    AC   HT
Sbjct: 285 RVIEIAACHSAHT 297



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 67/203 (33%), Positives = 112/203 (55%), Gaps = 7/203 (3%)

Query: 276 GKDRSAALSRGSVNSEGPGFRVPGNYVKGIAC----GGRHSAVITDAGALLTFGWGLYGQ 331
           G + S  L  G + S     R+     K IAC     G H  + T+ G + T+G   Y Q
Sbjct: 47  GMNCSGCLGTGDMQSTIEPRRLDSLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQ 106

Query: 332 CGQGSTDDELSPNCVSS-LLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            G G+T+    P  VS+ L+  ++  VA G  H++ ++SDG+VY +G N  GQ+G+G   
Sbjct: 107 LGNGTTNHGFVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTA 166

Query: 391 AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
            + +PR + +  L+N    +++CG   +  + ++G+V+ WG+N  GQLGLG   ++  P 
Sbjct: 167 NQPIPRRVTS-CLQNKIVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGSSGNQPTPC 225

Query: 451 QVT-IEGCVPRNVACGWWHTLLL 472
           ++  ++G   + VACG+ HTL+L
Sbjct: 226 RIAALQGIRVQRVACGYAHTLVL 248



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 116/233 (49%), Gaps = 34/233 (14%)

Query: 203 SGDENLSAFPCLVTLN-PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +G  N    PC V+ N    ++  VA G  H++ L+  G+V+ WGY   GQ+G GS    
Sbjct: 109 NGTTNHGFVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGS---- 164

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
            ++  PIP   +S  +++                      V  IACG   S  + + G +
Sbjct: 165 -TANQPIPRRVTSCLQNK---------------------IVVNIACGQMCSMAVVENGEV 202

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             +G+   GQ G GS+ ++ +P  +++L GI+++ VA G  HT+ ++ +G +YA+G N +
Sbjct: 203 YVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSY 262

Query: 382 GQLGTGGDQAETLPR--LLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           GQLGTG    ++ P   ++D   +  +     +C + HT A     G+V+ WG
Sbjct: 263 GQLGTGNKSNQSYPTTVVVDKDRVIEI----AACHSAHTSAAKTQSGQVYMWG 311



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 3/107 (2%)

Query: 368 SSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKV 427
           + + +V+  G N  G LGTG  Q+   PR LD+   + +   S   G  H  +  ++G+V
Sbjct: 38  TENDEVFVLGMNCSGCLGTGDMQSTIEPRRLDSLCGKKIACLSYGSGP-HVVLATEEGEV 96

Query: 428 FCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPR--NVACGWWHTLLL 472
           + WG N Y QLG G      +P QV+      +   VACG  H+++L
Sbjct: 97  YTWGHNAYSQLGNGTTNHGFVPCQVSTNLVNKKVIEVACGSHHSMVL 143


>gi|326670703|ref|XP_003199276.1| PREDICTED: hypothetical protein LOC571327 [Danio rerio]
          Length = 1698

 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 96/302 (31%), Positives = 137/302 (45%), Gaps = 51/302 (16%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLG--------SRIRMVS 263
           P  V +  G R  +VA G  HTL  +  G++   G   +GQLGLG         R+R   
Sbjct: 77  PVCVKVLKGERAQSVACGTDHTLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRLRPFC 136

Query: 264 SPHPIPCIESSYGKDRSAALSRGSV------NSEG------------PGFRVPGNYVKGI 305
              PI  +  S G   SAAL+          NS G            P     G  +  +
Sbjct: 137 DYAPIKLL--SAGDHTSAALTEDGRLFLWGDNSAGQLGFGNDSHALLPKELNMGQSIHWV 194

Query: 306 ACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD--DELSPNCVSSLLGIQIEGVAAGLWH 363
           +CG RHSA++TD+G + +FG    G+ G  +    +   P  V SL  +    VA G  H
Sbjct: 195 SCGYRHSALVTDSGDVYSFGESADGRLGLSAHQLANHSYPQRVESLHSVL--QVACGGKH 252

Query: 364 TICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP----SLENVHSKSVSCGARHTA 419
           T+ ++ D ++Y FGG +FGQLG G     TL  + D+P             V+CG +H+A
Sbjct: 253 TLALTED-ELYCFGGGEFGQLGLG-----TLVFVADSPVAVGHFRKGRVTHVTCGEQHSA 306

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVP------RNVACGWWHTLLLA 473
           +I D G ++ +G  ++G+LG G   D N  +Q T   C          VACG  H L+ A
Sbjct: 307 LITDSGLLYTFGDGRHGKLGHG---DENFTNQFTPTVCQRFFEYSVMTVACGSSHMLVFA 363

Query: 474 VP 475
            P
Sbjct: 364 RP 365



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/169 (35%), Positives = 88/169 (52%), Gaps = 4/169 (2%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           I+CG  HSA +T+ G L  FG    GQ G         P CV  L G + + VA G  HT
Sbjct: 39  ISCGQSHSAFVTEQGRLFVFGDNNRGQLGLQIKGPVTKPVCVKVLKGERAQSVACGTDHT 98

Query: 365 ICISSDGDVYAFGGNQFGQLGTGG-DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
           +  +S G++ A GGN  GQLG G  + + +  RL   P  +    K +S G   +A + +
Sbjct: 99  LVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRL--RPFCDYAPIKLLSAGDHTSAALTE 156

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           DG++F WG N  GQLG G+     +P ++ + G     V+CG+ H+ L+
Sbjct: 157 DGRLFLWGDNSAGQLGFGNDSHALLPKELNM-GQSIHWVSCGYRHSALV 204



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/255 (28%), Positives = 120/255 (47%), Gaps = 45/255 (17%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP-CIESSYGKDRSAALS 284
           ++ G  H+  +++ G+++ +G    GQLGL      +  P   P C++            
Sbjct: 39  ISCGQSHSAFVTEQGRLFVFGDNNRGQLGL-----QIKGPVTKPVCVKV----------- 82

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS-- 342
                       + G   + +ACG  H+ V T  G +L  G    GQ G G  +D +S  
Sbjct: 83  ------------LKGERAQSVACGTDHTLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQ 130

Query: 343 ---PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLD 399
              P C  + + +    ++AG   +  ++ DG ++ +G N  GQLG G D    LP+ L+
Sbjct: 131 RLRPFCDYAPIKL----LSAGDHTSAALTEDGRLFLWGDNSAGQLGFGNDSHALLPKELN 186

Query: 400 APSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG--DVIDRNIPSQVTIEGC 457
               +++H   VSCG RH+A++ D G V+ +G +  G+LGL    + + + P +V     
Sbjct: 187 MG--QSIH--WVSCGYRHSALVTDSGDVYSFGESADGRLGLSAHQLANHSYPQRVESLHS 242

Query: 458 VPRNVACGWWHTLLL 472
           V + VACG  HTL L
Sbjct: 243 VLQ-VACGGKHTLAL 256


>gi|355694504|gb|AER99691.1| hect domain and RLD 6 [Mustela putorius furo]
          Length = 1014

 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 88/271 (32%), Positives = 122/271 (45%), Gaps = 39/271 (14%)

Query: 206 ENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSP 265
           E     P L TL    R+  V+ G  H+LA+   G+V+ WG G EGQLG+G    +   P
Sbjct: 64  EQPKRIPALETL----RVDLVSCGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFNEINLIP 119

Query: 266 HPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFG 325
             I  +                              +  ++CG  HS  +++ G L T+G
Sbjct: 120 RKIKTLTDIK--------------------------IIQVSCGHHHSLALSEDGRLFTWG 153

Query: 326 WGLYGQCGQGST-DDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQL 384
              +GQ G G     + SP  V  L GI +  VAAG  H+  +S  G  + +G N  GQL
Sbjct: 154 SNSHGQLGLGKECPSQASPQRVQFLDGIPLTQVAAGGAHSFALSLSGASFGWGSNSEGQL 213

Query: 385 GTGGDQAETL----PRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL 440
                    +    P  +DA  LEN+    +SCG  HTAV+   GKVF +G N YGQLG 
Sbjct: 214 ALRKKNVPVVQSSKPCSVDA--LENLGVVYISCGYEHTAVLTQTGKVFTFGGNSYGQLGY 271

Query: 441 GDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
                +  P  V  I+G V + + CG +HTL
Sbjct: 272 SPTAGKEGPQLVEGIDGLVSQ-IDCGSYHTL 301



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 83/302 (27%), Positives = 123/302 (40%), Gaps = 56/302 (18%)

Query: 84  KHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGL 143
           +  E P+  P      +   + G  H +AV   G V+ WG      +G   G L  G   
Sbjct: 61  QRQEQPKRIPALETLRVDLVSCGKEHSLAVCYKGRVFAWG------AGSE-GQLGIGEFN 113

Query: 144 DKDVFERQSSFLTEQVSPRSQVSRSSGGTSS---GTDGR----GSGEEGSKRRRISLAKQ 196
           + ++  R+   LT+       +  S G   S     DGR    GS   G    ++ L K+
Sbjct: 114 EINLIPRKIKTLTDI----KIIQVSCGHHHSLALSEDGRLFTWGSNSHG----QLGLGKE 165

Query: 197 TAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLG 256
               +S         P  V    G+ +  VAAGG H+ ALS  G  +GWG   EGQL L 
Sbjct: 166 CPSQAS---------PQRVQFLDGIPLTQVAAGGAHSFALSLSGASFGWGSNSEGQLALR 216

Query: 257 SRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVIT 316
            +         +P ++SS      A  + G V                I+CG  H+AV+T
Sbjct: 217 KK--------NVPVVQSSKPCSVDALENLGVVY---------------ISCGYEHTAVLT 253

Query: 317 DAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYA 375
             G + TFG   YGQ G   T  +  P  V  + G+ +  +  G +HT+  + + G V +
Sbjct: 254 QTGKVFTFGGNSYGQLGYSPTAGKEGPQLVEGIDGL-VSQIDCGSYHTLAYVYTTGKVVS 312

Query: 376 FG 377
           FG
Sbjct: 313 FG 314


>gi|194206384|ref|XP_001917973.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase HERC2
           [Equus caballus]
          Length = 4840

 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 129/255 (50%), Gaps = 29/255 (11%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           V+IA   + G H LAL+  G+V+ WG G  G+LG G  +     P   P + S++   ++
Sbjct: 497 VKIAA-HSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 550

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                             G +V  IACG  +SA IT  G L T+G G YG+ G GS++DE
Sbjct: 551 ------------------GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 592

Query: 341 LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
             P  V+ L G+++  VA  +G   T+ ++ +G V+++G   +G+LG GG      P+L+
Sbjct: 593 AVPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLI 652

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGC 457
           +   L+++    V CG++ +  +  DG+V+ WG     +LG G       P  +  ++G 
Sbjct: 653 E--KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGK 710

Query: 458 VPRNVACGWWHTLLL 472
              +VA G  H L L
Sbjct: 711 KVIDVAAGSTHCLAL 725



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 86/313 (27%), Positives = 131/313 (41%), Gaps = 85/313 (27%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GGRH  AL+  G+V+ WG G +G+LG  SR+     P  I  +++   +D  
Sbjct: 3051 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRD-- 3107

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                    IACG  HSA +T +G L T+G G YG+ G G    +
Sbjct: 3108 ------------------------IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ 3143

Query: 341  LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V  LLG ++  VA G     T+ ++ +G V+++G   FG+LG GG +   +P+ +
Sbjct: 3144 LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNI 3203

Query: 399  DAPSLE------------------------------------NVHSKS------------ 410
            +  + +                                    +VH +             
Sbjct: 3204 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI 3263

Query: 411  --VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACG-- 465
              V+ GA H   + D G+V+ WG N +GQ G G       P+ V  +EG     VACG  
Sbjct: 3264 VHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3323

Query: 466  ---WWHTLLLAVP 475
                W T+ +A P
Sbjct: 3324 HSVAWTTVDMATP 3336



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 145/365 (39%), Gaps = 82/365 (22%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V   +G  HC+A++  GEVY+WG  E         D   G G ++   +R    + E + 
Sbjct: 4048 VAVNSGGKHCLALSSEGEVYSWGEAE---------DGKLGHG-NRSPCDRPR--VIESLR 4095

Query: 161  PRSQVSRSSGGTSSG-TDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
                V  ++GG  S      G      K R   L    +E            P LV    
Sbjct: 4096 GIELVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLK--------PKLVEALQ 4147

Query: 220  GVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
            G R+  VA  +G   TL L+D   VW WG G  G+LG G                   G 
Sbjct: 4148 GHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-------------------GS 4188

Query: 278  DRSAALSRGSVNSEGPGFRVPGNY-------VKGIACGGRHSAVITDAGALLTFGWGLYG 330
            D               G +VP          V  + CG + S  +T +GA+ T+G G Y 
Sbjct: 4189 D---------------GCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4233

Query: 331  QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            + G GS D    P  V  L G ++  +A G  H +C + DG+VY +G N  GQLG G   
Sbjct: 4234 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTN 4293

Query: 391  AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
            A   PRL+  P+L+      V+CG+ HT           W  +K    G        +P+
Sbjct: 4294 AIQRPRLV--PALQGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPT 4335

Query: 451  QVTIE 455
            QV +E
Sbjct: 4336 QVPME 4340



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 80/282 (28%), Positives = 126/282 (44%), Gaps = 33/282 (11%)

Query: 220  GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES------ 273
             + +  VA G +   A++  G+V+  G    G+LGLG     V  P  +  + S      
Sbjct: 2995 ALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQVTALSSYVVKKV 3054

Query: 274  ---SYGKDRSAALSRGSVNSEGPG-------------------FRVPGNYVKGIACGGRH 311
               S G+  +A    G V S G G                     +    ++ IACG  H
Sbjct: 3055 AVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSH 3114

Query: 312  SAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW--HTICISS 369
            SA +T +G L T+G G YG+ G G    +L P  V  LLG ++  VA G     T+ ++ 
Sbjct: 3115 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3174

Query: 370  DGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFC 429
            +G V+++G   FG+LG GG +   +P+ ++  + + V    + CGA+ +  +   G V+ 
Sbjct: 3175 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVC--QIECGAQFSLALTKSGVVWT 3232

Query: 430  WGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
            WG   Y +LG G  +    P  V  + G    +VA G  H L
Sbjct: 3233 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCL 3274



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 102/355 (28%), Positives = 150/355 (42%), Gaps = 59/355 (16%)

Query: 99   SIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQ 158
            ++V+ A G     AVT  G+VY  G      +GR+   +S+GT        RQ + L+  
Sbjct: 2997 NVVQVAGGSKSLFAVTVEGKVYACGE---ATNGRLGLGISSGTV----PIPRQVTALSSY 3049

Query: 159  VSPRSQVSRSSGG---TSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAF 211
            V  +  V+  SGG   T+   DG+    G G++G         K    S  + D+     
Sbjct: 3050 VVKK--VAVHSGGRHATALTVDGKVFSWGEGDDG---------KLGHFSRMNCDK----- 3093

Query: 212  PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS-----RIRMVSSPH 266
            P L+      RI  +A G  H+ AL+  G+++ WG G  G+LG G      + +MV    
Sbjct: 3094 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL 3153

Query: 267  PIPCIESSYGKDRSAALS---RGSVNSEGPG-------------------FRVPGNYVKG 304
                I+ + G   +  L+    G V S G G                    R+ G  V  
Sbjct: 3154 GHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQ 3213

Query: 305  IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
            I CG + S  +T +G + T+G G Y + G GS      P  V  L G +I  VA G  H 
Sbjct: 3214 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHC 3273

Query: 365  ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            + ++  G VYA+G N  GQ G G       P L+    LE      V+CG+ H+ 
Sbjct: 3274 LAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 3326



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 124/270 (45%), Gaps = 46/270 (17%)

Query: 233  TLALSDIGQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAALSRG---- 286
            TL+    G ++GWG+   GQLG   G+++++     P PC   +    R   L  G    
Sbjct: 3951 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKV-----PTPC--EALATLRPVQLIGGEQTL 4003

Query: 287  -SVNSEGPGF-------------------------RVPGNYVKGIAC--GGRHSAVITDA 318
             +V ++G  +                          +   ++K +A   GG+H   ++  
Sbjct: 4004 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4063

Query: 319  GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            G + ++G    G+ G G+      P  + SL GI++  VAAG  H+ C+++ GD+Y +G 
Sbjct: 4064 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIELVDVAAGGAHSACVTAAGDLYTWGK 4123

Query: 379  NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGA--RHTAVIADDGKVFCWGWNKYG 436
             ++G+LG    + +  P+L++A  L+      V+CG+    T  + DD  V+ WG   YG
Sbjct: 4124 GRYGRLGHSDSEDQLKPKLVEA--LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYG 4181

Query: 437  QLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
            +LG G      +P ++ ++ G     V CG
Sbjct: 4182 KLGRGGSDGCKVPMKIDSLTGLGVVKVECG 4211



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 93/217 (42%), Gaps = 38/217 (17%)

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
           SS DE   A P LV    G+++  VA  +G   TLA+++ GQVW WG G  G+LG G   
Sbjct: 588 SSEDE---AVPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG--- 641

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITD 317
                                     GS   + P    ++    V  + CG + S  +T 
Sbjct: 642 --------------------------GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTK 675

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
            G + ++G G   + G G+ +    P  +  L G ++  VAAG  H + ++ D +V+++G
Sbjct: 676 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
            N   Q        +  P  L  P L+  H   ++CG
Sbjct: 736 SNDQCQHFDTLRVTKPEPSAL--PGLDTKHIVGIACG 770



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 96/199 (48%), Gaps = 18/199 (9%)

Query: 282  ALSRGSVNSEGPGF---RVPG--------NYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
            A+S GS+  +G G    +VP         N V+ +A G +    +T  G +   G    G
Sbjct: 2968 AVSTGSLCCDGVGLSQIKVPSFSETLSALNVVQ-VAGGSKSLFAVTVEGKVYACGEATNG 3026

Query: 331  QCGQGSTDDELS-PNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTG 387
            + G G +   +  P  V++L    ++ VA  +G  H   ++ DG V+++G    G+LG  
Sbjct: 3027 RLGLGISSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHF 3086

Query: 388  GDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
                   PRL++A  L+    + ++CG+ H+A +   G+++ WG  +YG+LG GD   + 
Sbjct: 3087 SRMNCDKPRLIEA--LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQL 3144

Query: 448  IPSQVTI-EGCVPRNVACG 465
             P  V +  G     VACG
Sbjct: 3145 KPKMVKVLLGHRVIQVACG 3163



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 5/73 (6%)

Query: 53   GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
            G  F++A++ S  + TWG  D   LG     S  H   P          ++  A G  HC
Sbjct: 4211 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRRPRQVQGLQGKKVIAIATGSLHC 4267

Query: 111  VAVTEGGEVYTWG 123
            V  TE GEVYTWG
Sbjct: 4268 VCCTEDGEVYTWG 4280


>gi|198421655|ref|XP_002121487.1| PREDICTED: similar to hect domain and RLD 4 [Ciona intestinalis]
          Length = 1029

 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 122/256 (47%), Gaps = 38/256 (14%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           V I  +A G  H LA+ D G+V+GWG   + QLG         + +P P         + 
Sbjct: 77  VHIVDIALGDSHILAIDDKGKVYGWGGNDKDQLGWTD-----GNCYPSP--------KKI 123

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDD 339
            +LS               N +  +ACG  HS  +   GAL + G   YGQ G G  +  
Sbjct: 124 KSLS---------------NKIVQVACGHSHSLFLGSNGALWSAGSNNYGQLGFGDKSST 168

Query: 340 ELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLD 399
           EL P  + SL GI    ++AG WH+ C++  G V+ +G N  GQLG G      +P LL 
Sbjct: 169 ELRP--LISLKGIPFSQISAGFWHSFCVTHSGAVFCWGRNDNGQLGLGDCVDRNVPVLLK 226

Query: 400 APSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG----DVIDRNIPSQV-TI 454
           A  L ++  K +  G  HTA +  DG VF +G N++GQLG G    + +  + P ++  +
Sbjct: 227 A--LRSLSVKYICAGELHTAALTLDGGVFTFGSNQFGQLGHGSSGPEPLPVSTPRKIFEL 284

Query: 455 EGCVPRNVACGWWHTL 470
            G     +ACG  HT+
Sbjct: 285 MGNEVTQIACGAQHTV 300



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/177 (33%), Positives = 89/177 (50%), Gaps = 9/177 (5%)

Query: 301 YVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL--SPNCVSSLLGIQIEGVA 358
           ++  IA G  H   I D G +  +GWG   +   G TD     SP  + SL   +I  VA
Sbjct: 78  HIVDIALGDSHILAIDDKGKV--YGWGGNDKDQLGWTDGNCYPSPKKIKSLSN-KIVQVA 134

Query: 359 AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
            G  H++ + S+G +++ G N +GQLG G   +  L  L+   SL+ +    +S G  H+
Sbjct: 135 CGHSHSLFLGSNGALWSAGSNNYGQLGFGDKSSTELRPLI---SLKGIPFSQISAGFWHS 191

Query: 419 AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLAV 474
             +   G VFCWG N  GQLGLGD +DRN+P  +  +     + +  G  HT  L +
Sbjct: 192 FCVTHSGAVFCWGRNDNGQLGLGDCVDRNVPVLLKALRSLSVKYICAGELHTAALTL 248



 Score = 46.6 bits (109), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 70/275 (25%), Positives = 99/275 (36%), Gaps = 73/275 (26%)

Query: 100 IVKAAAGWAHCVAVTEGGEVYTWG--------WKE--CVPSGRVFGDLSTGTGLDKDVFE 149
           IV  A G +H +A+ + G+VY WG        W +  C PS +    LS    +      
Sbjct: 79  IVDIALGDSHILAIDDKGKVYGWGGNDKDQLGWTDGNCYPSPKKIKSLSNKI-VQVACGH 137

Query: 150 RQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSG----- 204
             S FL       +    S+G  + G  G G       R  ISL        S+G     
Sbjct: 138 SHSLFLGS-----NGALWSAGSNNYGQLGFGDKSSTELRPLISLKGIPFSQISAGFWHSF 192

Query: 205 -------------------------DENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDI 239
                                    D N+   P L+     + +  + AG  HT AL+  
Sbjct: 193 CVTHSGAVFCWGRNDNGQLGLGDCVDRNV---PVLLKALRSLSVKYICAGELHTAALTLD 249

Query: 240 GQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPG 299
           G V+ +G    GQLG GS     S P P+P                  V++    F + G
Sbjct: 250 GGVFTFGSNQFGQLGHGS-----SGPEPLP------------------VSTPRKIFELMG 286

Query: 300 NYVKGIACGGRHSA-VITDAGALLTFGWGLYGQCG 333
           N V  IACG +H+   +   G + TFG   + Q G
Sbjct: 287 NEVTQIACGAQHTVCYVGKTGNVYTFGNNNHSQLG 321



 Score = 43.1 bits (100), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 47/119 (39%), Gaps = 8/119 (6%)

Query: 354 IEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSC 413
           I+ V       + +  DG V+ FG      +G      +         +LE VH   ++ 
Sbjct: 33  IKSVRVSRTIAVFLLEDGTVHTFGAEN-DNIGHSAGSTK-------VSALETVHIVDIAL 84

Query: 414 GARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           G  H   I D GKV+ WG N   QLG  D      P ++         VACG  H+L L
Sbjct: 85  GDSHILAIDDKGKVYGWGGNDKDQLGWTDGNCYPSPKKIKSLSNKIVQVACGHSHSLFL 143


>gi|449280347|gb|EMC87674.1| RCC1 and BTB domain-containing protein 2, partial [Columba livia]
          Length = 531

 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 80/253 (31%), Positives = 129/253 (50%), Gaps = 31/253 (12%)

Query: 220 GVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
           G +IA ++ G G H +  ++ G+V+ WG+    QLG G+     ++   +PC        
Sbjct: 78  GKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGT-----TNHGFVPC-------- 124

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
               +S   VN +          V  +ACG  HS V+T  G + T+G+   GQ G GST 
Sbjct: 125 ---QVSTNLVNKK----------VIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTA 171

Query: 339 DELSPNCVSSLLGIQIE-GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
           ++  P  V+S L  +I   +A G   ++ +  +G+VY +G N  GQLG G    +  P  
Sbjct: 172 NQPIPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGSSGNQPTPCR 231

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE-G 456
           + A  L+ +  + V+CG  HT V+ D+G+++ WG N YGQLG G+  +++ P+ V ++  
Sbjct: 232 IAA--LQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTTVVVDKD 289

Query: 457 CVPRNVACGWWHT 469
            V    AC   HT
Sbjct: 290 RVIEIAACHSAHT 302



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 67/203 (33%), Positives = 112/203 (55%), Gaps = 7/203 (3%)

Query: 276 GKDRSAALSRGSVNSEGPGFRVPGNYVKGIAC----GGRHSAVITDAGALLTFGWGLYGQ 331
           G + S  L  G + S     R+     K IAC     G H  + T+ G + T+G   Y Q
Sbjct: 52  GMNCSGCLGTGDMQSTIEPRRLDSLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQ 111

Query: 332 CGQGSTDDELSPNCVSS-LLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            G G+T+    P  VS+ L+  ++  VA G  H++ ++SDG+VY +G N  GQ+G+G   
Sbjct: 112 LGNGTTNHGFVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTA 171

Query: 391 AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
            + +PR + +  L+N    +++CG   +  + ++G+V+ WG+N  GQLGLG   ++  P 
Sbjct: 172 NQPIPRRVTS-CLQNKIVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGSSGNQPTPC 230

Query: 451 QVT-IEGCVPRNVACGWWHTLLL 472
           ++  ++G   + VACG+ HTL+L
Sbjct: 231 RIAALQGIRVQRVACGYAHTLVL 253



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 116/233 (49%), Gaps = 34/233 (14%)

Query: 203 SGDENLSAFPCLVTLN-PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +G  N    PC V+ N    ++  VA G  H++ L+  G+V+ WGY   GQ+G GS    
Sbjct: 114 NGTTNHGFVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGS---- 169

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
            ++  PIP   +S  +++                      V  IACG   S  + + G +
Sbjct: 170 -TANQPIPRRVTSCLQNK---------------------IVVNIACGQMCSMAVVENGEV 207

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             +G+   GQ G GS+ ++ +P  +++L GI+++ VA G  HT+ ++ +G +YA+G N +
Sbjct: 208 YVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSY 267

Query: 382 GQLGTGGDQAETLPR--LLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           GQLGTG    ++ P   ++D   +  +     +C + HT A     G+V+ WG
Sbjct: 268 GQLGTGNKSNQSYPTTVVVDKDRVIEI----AACHSAHTSAAKTQSGQVYMWG 316



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 3/107 (2%)

Query: 368 SSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKV 427
           + + +V+  G N  G LGTG  Q+   PR LD+   + +   S   G  H  +  ++G+V
Sbjct: 43  TENDEVFVLGMNCSGCLGTGDMQSTIEPRRLDSLCGKKIACLSYGSGP-HVVLATEEGEV 101

Query: 428 FCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPR--NVACGWWHTLLL 472
           + WG N Y QLG G      +P QV+      +   VACG  H+++L
Sbjct: 102 YTWGHNAYSQLGNGTTNHGFVPCQVSTNLVNKKVIEVACGSHHSMVL 148


>gi|376260724|ref|YP_005147444.1| RCC1 domain-containing protein, alpha-tubulin suppressor
           [Clostridium sp. BNL1100]
 gi|373944718|gb|AEY65639.1| RCC1 domain-containing protein, alpha-tubulin suppressor
           [Clostridium sp. BNL1100]
          Length = 985

 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 111/426 (26%), Positives = 178/426 (41%), Gaps = 80/426 (18%)

Query: 56  FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTE 115
           ++MA+     + TWG  +D GQ  +  G       P  +   + I+  ++G +H +A+ +
Sbjct: 236 YSMALKSDGTVWTWGE-NDYGQ--LGDGTTATRLSPVQVQNLSGIIAISSGNSHSLALKD 292

Query: 116 GGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG---- 171
            G V+ WG  E        G L  GT          S ++  QV   S +   S G    
Sbjct: 293 DGTVWAWGDNES-------GQLGDGT--------TNSKYIPSQVQGLSGIVSISCGFYYS 337

Query: 172 TSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVA 227
            +   DG     G    G      +  + TA   S  D                 +  +A
Sbjct: 338 MALKNDGTVWVWGDNTSGQLGDGTTTDRNTAVPVSGLD----------------GVIAIA 381

Query: 228 AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGS 287
            G  H++AL + G VW WG+   GQLG G+++   ++  PI  ++               
Sbjct: 382 CGVNHSMALRNDGTVWTWGFNAFGQLGDGTKVSK-NTAVPISGLDG-------------- 426

Query: 288 VNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVS 347
                         +  I CG  HS  + D G +  +G   YGQ G G+     +P+ VS
Sbjct: 427 --------------IIAITCGTSHSMALKDDGTVWAWGDNQYGQLGNGTFISNTTPSQVS 472

Query: 348 SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVH 407
           +L GI+   +  G   +  +  DG V+A+G N++G+LG G       P      +L    
Sbjct: 473 NLSGIK--SIFCGYSTSFALKPDGTVWAWGNNEYGELGKGFTTRVIYP----TETLNIGD 526

Query: 408 SKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGW 466
            K++S G+ H   + +DG V+ WG N+YGQLG G    +++P QV+ I G     ++ G 
Sbjct: 527 IKAISIGSSHCLALKNDGTVWAWGDNRYGQLGDGTTTIKSLPVQVSGISGITA--ISAGG 584

Query: 467 WHTLLL 472
            H+L L
Sbjct: 585 SHSLAL 590



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/266 (29%), Positives = 135/266 (50%), Gaps = 28/266 (10%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS----------------SP 265
           ++++++AG  +++AL   G VW WG    GQLG G+    +S                + 
Sbjct: 226 KVSSISAGKYYSMALKSDGTVWTWGENDYGQLGDGTTATRLSPVQVQNLSGIIAISSGNS 285

Query: 266 HPIPCIES----SYGKDRSAALSRGSVNSEGPGFRVPG-NYVKGIACGGRHSAVITDAGA 320
           H +   +     ++G + S  L  G+ NS+    +V G + +  I+CG  +S  + + G 
Sbjct: 286 HSLALKDDGTVWAWGDNESGQLGDGTTNSKYIPSQVQGLSGIVSISCGFYYSMALKNDGT 345

Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
           +  +G    GQ G G+T D  +   VS L G+    +A G+ H++ + +DG V+ +G N 
Sbjct: 346 VWVWGDNTSGQLGDGTTTDRNTAVPVSGLDGVI--AIACGVNHSMALRNDGTVWTWGFNA 403

Query: 381 FGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL 440
           FGQLG G   ++     +    L+ +   +++CG  H+  + DDG V+ WG N+YGQLG 
Sbjct: 404 FGQLGDGTKVSKNTA--VPISGLDGI--IAITCGTSHSMALKDDGTVWAWGDNQYGQLGN 459

Query: 441 GDVIDRNIPSQVTIEGCVPRNVACGW 466
           G  I    PSQV+    + +++ CG+
Sbjct: 460 GTFISNTTPSQVSNLSGI-KSIFCGY 484



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 120/251 (47%), Gaps = 38/251 (15%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  HTLAL   G VW  G    GQLG  + I  ++SP P+  +           
Sbjct: 177 IIKVSGGESHTLALESDGTVWACGENDYGQLGNNNTID-INSPIPVEGL----------- 224

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                            N V  I+ G  +S  +   G + T+G   YGQ G G+T   LS
Sbjct: 225 -----------------NKVSSISAGKYYSMALKSDGTVWTWGENDYGQLGDGTTATRLS 267

Query: 343 PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPS 402
           P  V +L GI    +++G  H++ +  DG V+A+G N+ GQLG G   ++ +P  +   S
Sbjct: 268 PVQVQNLSGII--AISSGNSHSLALKDDGTVWAWGDNESGQLGDGTTNSKYIPSQVQGLS 325

Query: 403 LENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRN 461
                  S+SCG  ++  + +DG V+ WG N  GQLG G   DRN    V+ ++G +   
Sbjct: 326 ----GIVSISCGFYYSMALKNDGTVWVWGDNTSGQLGDGTTTDRNTAVPVSGLDGVIA-- 379

Query: 462 VACGWWHTLLL 472
           +ACG  H++ L
Sbjct: 380 IACGVNHSMAL 390



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/243 (29%), Positives = 102/243 (41%), Gaps = 32/243 (13%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR--------IRMVSSPHPIP-CIES 273
           I  ++AGG H+LAL   G VW WG    GQLG G++        +  +S    I  CI  
Sbjct: 577 ITAISAGGSHSLALKSDGTVWAWGQNNVGQLGDGTKEDRNTPVQVSELSGITVISNCIYR 636

Query: 274 SYGKDRSAAL---SRGSVNSEGPGFRVPGNY-----VKGIACGGRHSAVITDAGALLTFG 325
           S+       +      S N       +P        +  I CG  H+  + + G +  +G
Sbjct: 637 SFALKNDGTVWVWGSDSYNLPLEKMTMPIQISGLSGIIAIECGTYHNLALKNDGTVWAWG 696

Query: 326 WGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQL- 384
              +GQ G G+T     P  VS L G++   +A G   +I + SDG V+     Q+G++ 
Sbjct: 697 KNNFGQFGDGTTTTTNIPVQVSGLSGVK--AIAVGGNRSIALKSDGTVW-----QWGRIL 749

Query: 385 -GTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDV 443
                   ET         L  + S S      +   + +DGKVF WG N YGQLG G  
Sbjct: 750 VSVSPSTVETWTTARQVDGLSEIVSIS------NNVALKNDGKVFTWGANDYGQLGDGTT 803

Query: 444 IDR 446
             R
Sbjct: 804 TAR 806



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 86/316 (27%), Positives = 125/316 (39%), Gaps = 53/316 (16%)

Query: 94  LPTEAS----IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFE 149
           LP + S    I   +AG +H +A+   G V+ WG           G L  GT  D++   
Sbjct: 567 LPVQVSGISGITAISAGGSHSLALKSDGTVWAWGQNNV-------GQLGDGTKEDRNT-P 618

Query: 150 RQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLS 209
            Q S L+      + + RS    + GT        GS    + L K T     SG   + 
Sbjct: 619 VQVSELSGITVISNCIYRSFALKNDGT----VWVWGSDSYNLPLEKMTMPIQISGLSGII 674

Query: 210 AFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR-----MVSS 264
           A  C               G  H LAL + G VW WG    GQ G G+         VS 
Sbjct: 675 AIEC---------------GTYHNLALKNDGTVWAWGKNNFGQFGDGTTTTTNIPVQVSG 719

Query: 265 PHPIPCIESSYGKDRSAALSRG-----------SVNSEGPGFRVPGNYVKGIA--CGGRH 311
              +  I  + G +RS AL              SV+            V G++      +
Sbjct: 720 LSGVKAI--AVGGNRSIALKSDGTVWQWGRILVSVSPSTVETWTTARQVDGLSEIVSISN 777

Query: 312 SAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDG 371
           +  + + G + T+G   YGQ G G+T   ++   VS L G+   GVA+    ++ + +DG
Sbjct: 778 NVALKNDGKVFTWGANDYGQLGDGTTTARVTVAPVSGLEGV--AGVASSDTTSMVLMNDG 835

Query: 372 DVYAFGGNQFGQLGTG 387
            + A+G N FGQLG G
Sbjct: 836 TIRAWGKNNFGQLGNG 851



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 62/125 (49%), Gaps = 11/125 (8%)

Query: 353 QIEG----VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHS 408
           +IEG    V+ G  HT+ + SDG V+A G N +GQLG         P  +    L  V  
Sbjct: 172 KIEGPIIKVSGGESHTLALESDGTVWACGENDYGQLGNNNTIDINSP--IPVEGLNKV-- 227

Query: 409 KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWW 467
            S+S G  ++  +  DG V+ WG N YGQLG G    R  P QV  + G +   ++ G  
Sbjct: 228 SSISAGKYYSMALKSDGTVWTWGENDYGQLGDGTTATRLSPVQVQNLSGIIA--ISSGNS 285

Query: 468 HTLLL 472
           H+L L
Sbjct: 286 HSLAL 290


>gi|354489070|ref|XP_003506687.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
           HERC2-like [Cricetulus griseus]
          Length = 4836

 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 86/292 (29%), Positives = 145/292 (49%), Gaps = 31/292 (10%)

Query: 186 SKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAA--GGRHTLALSDIGQVW 243
           +++R + L++     + + + ++ A P LV       I  +AA   G H LAL+  G+V+
Sbjct: 460 AEKRFLILSRNGRVYTQAYNSDMLA-PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY 518

Query: 244 GWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVK 303
            WG G  G+LG G  +     P   P + S++   ++                  G +V 
Sbjct: 519 SWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA------------------GKHVV 555

Query: 304 GIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA--AGL 361
            IACG  +SA IT  G L T+G G YG+ G GS++DE  P  V+ L G+++  VA  +G 
Sbjct: 556 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGD 615

Query: 362 WHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
             T+ ++ +G V+++G   +G+LG GG      P+L++   L+++    V CG++ +  +
Sbjct: 616 AQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE--KLQDLDVIKVRCGSQFSIAL 673

Query: 422 ADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
             DG+V+ WG     +LG G       P  +  ++G    +VA G  H L L
Sbjct: 674 TKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 725



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 128/303 (42%), Gaps = 80/303 (26%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GGRH  AL+  G+V+ WG G +G+LG  SR+     P  I  +++   +D  
Sbjct: 3048 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRD-- 3104

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                    IACG  HSA +T +G L T+G G YG+ G G    +
Sbjct: 3105 ------------------------IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ 3140

Query: 341  LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V  LLG ++  VA G     T+ ++ +G V+++G   FG+LG GG +   +P+ +
Sbjct: 3141 LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNI 3200

Query: 399  DAPSLE------------------------------------NVHSKS------------ 410
            +  + +                                    +VH +             
Sbjct: 3201 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI 3260

Query: 411  --VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWW 467
              V+ GA H   + D G+V+ WG N +GQ G G       P+ V  +EG     VACG  
Sbjct: 3261 VHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3320

Query: 468  HTL 470
            H++
Sbjct: 3321 HSV 3323



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 144/365 (39%), Gaps = 82/365 (22%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V   +G  HC+A++  GEVY+WG  E         D   G G ++   +R    + E + 
Sbjct: 4044 VAVNSGGKHCLALSSEGEVYSWGEAE---------DGKLGHG-NRSPCDRPR--VIESLR 4091

Query: 161  PRSQVSRSSGGTSSG-TDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
                V  ++GG  S      G      K R   L    +E            P LV    
Sbjct: 4092 GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLK--------PKLVEALQ 4143

Query: 220  GVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
            G R+  +A  +G   TL L+D   VW WG G  G+LG G                   G 
Sbjct: 4144 GHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-------------------GS 4184

Query: 278  DRSAALSRGSVNSEGPGFRVPGNY-------VKGIACGGRHSAVITDAGALLTFGWGLYG 330
            D               G +VP          V  + CG + S  +T +GA+ T+G G Y 
Sbjct: 4185 D---------------GCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4229

Query: 331  QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            + G GS D    P  V  L G ++  +A G  H +C + DG+VY +G N  GQLG G   
Sbjct: 4230 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTN 4289

Query: 391  AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
            A   PRL+ A  L+      V+CG+ HT           W  +K    G        +P+
Sbjct: 4290 AIQRPRLVAA--LQGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPA 4331

Query: 451  QVTIE 455
            QV +E
Sbjct: 4332 QVPME 4336



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 163/389 (41%), Gaps = 60/389 (15%)

Query: 65   KLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGW 124
            K+  WG  +D  Q     G   ++P      +  ++V+ A G     AVT  G+VY+ G 
Sbjct: 2961 KVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGE 3019

Query: 125  KECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG---TSSGTDGR-- 179
                 +GR+   +S+GT        RQ + L+  V  +  V+  SGG   T+   DG+  
Sbjct: 3020 ---ATNGRLGLGMSSGTV----PIPRQITALSSYVVKK--VAVHSGGRHATALTVDGKVF 3070

Query: 180  --GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS 237
              G G++G         K    S  + D+     P L+      RI  +A G  H+ AL+
Sbjct: 3071 SWGEGDDG---------KLGHFSRMNCDK-----PRLIEALKTKRIRDIACGSSHSAALT 3116

Query: 238  DIGQVWGWGYGGEGQLGLGS-----RIRMVSSPHPIPCIESSYGKDRSAALS---RGSVN 289
              G+++ WG G  G+LG G      + +MV        I+ + G   +  L+    G V 
Sbjct: 3117 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 3176

Query: 290  SEGPG-------------------FRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
            S G G                    R+ G  V  I CG + S  +T +G + T+G G Y 
Sbjct: 3177 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 3236

Query: 331  QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            + G GS      P  V  L G +I  VA G  H + ++  G VYA+G N  GQ G G   
Sbjct: 3237 RLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTT 3296

Query: 391  AETLPRLLDAPSLENVHSKSVSCGARHTA 419
                P L+    LE      V+CG+ H+ 
Sbjct: 3297 VNRKPTLVQG--LEGQKITRVACGSSHSV 3323



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/276 (25%), Positives = 123/276 (44%), Gaps = 50/276 (18%)

Query: 225  TVAAGGRHTLALSDIGQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAA 282
            T++AGG         G ++GWG+   GQLG   G+++++     P PC   +    R   
Sbjct: 3947 TLSAGGS--------GTIYGWGHNHRGQLGGIEGAKVKV-----PTPC--EALATLRPVQ 3991

Query: 283  LSRG-----SVNSEGPGF-------------------------RVPGNYVKGIAC--GGR 310
            L  G     +V ++G  +                          +   ++K +A   GG+
Sbjct: 3992 LIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGK 4051

Query: 311  HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
            H   ++  G + ++G    G+ G G+      P  + SL GI++  VAAG  H+ C+++ 
Sbjct: 4052 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAA 4111

Query: 371  GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
            GD+Y +G  ++G+LG    + +  P+L++A     V   +   G   T  + DD  V+ W
Sbjct: 4112 GDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSW 4171

Query: 431  GWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
            G   YG+LG G      +P ++ ++ G     V CG
Sbjct: 4172 GDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECG 4207



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 92/217 (42%), Gaps = 38/217 (17%)

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
           SS DE   A P LV    G+++  VA  +G   TLA+++ GQVW WG G  G+LG G   
Sbjct: 588 SSEDE---AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG--- 641

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITD 317
                                     GS   + P    ++    V  + CG + S  +T 
Sbjct: 642 --------------------------GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTK 675

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
            G + ++G G   + G G+ +    P  +  L G ++  VAAG  H + ++ D +V+++G
Sbjct: 676 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
            N   Q         T P     P L+  H   ++CG
Sbjct: 736 SND--QCQHFDTLRVTKPEPTALPGLDTKHIVGIACG 770



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 121/276 (43%), Gaps = 48/276 (17%)

Query: 205  DENLSAFPCLVTLNP---------GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG- 254
            +E+L+A P L + N          G  I    AG   T  +    +V+ WG   + QLG 
Sbjct: 2918 EEDLAAVPFLASDNEEEEDDKGSTGSLIRKKTAGLESTATIR--TKVFVWGLNDKDQLGG 2975

Query: 255  -LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSA 313
              GS+I++            S+ +  SA                  N V+ +A G +   
Sbjct: 2976 LKGSKIKV-----------PSFSETLSAL-----------------NVVQ-VAGGSKSLF 3006

Query: 314  VITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVA--AGLWHTICISSD 370
             +T  G + + G    G+ G G +   +  P  +++L    ++ VA  +G  H   ++ D
Sbjct: 3007 AVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVD 3066

Query: 371  GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
            G V+++G    G+LG         PRL++A  L+    + ++CG+ H+A +   G+++ W
Sbjct: 3067 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEA--LKTKRIRDIACGSSHSAALTSSGELYTW 3124

Query: 431  GWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACG 465
            G  +YG+LG GD   +  P  V +  G     VACG
Sbjct: 3125 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3160



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 5/73 (6%)

Query: 53   GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
            G  F++A++ S  + TWG  D   LG     S  H   P          ++  A G  HC
Sbjct: 4207 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRRPRQVQGLQGKKVIAIATGSLHC 4263

Query: 111  VAVTEGGEVYTWG 123
            V  TE GEVYTWG
Sbjct: 4264 VCCTEDGEVYTWG 4276


>gi|410988349|ref|XP_004000448.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Felis
           catus]
          Length = 993

 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 99/302 (32%), Positives = 145/302 (48%), Gaps = 53/302 (17%)

Query: 213 CLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR--------IRMVSS 264
           C+  L P  ++   A G  HTL  ++ G+V+  G   EGQLGLG          I   +S
Sbjct: 80  CVKALKPE-KVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERNTFHLISFFTS 138

Query: 265 PHPIPCIESSYGKDRSAALSRGSV------NSEGP-GFR------VPGNYVKG-----IA 306
            H I  +  S G + SAAL+          NSEG  G +      VP     G     I+
Sbjct: 139 QHKIKQL--SAGSNTSAALTEDGELFMWGDNSEGQIGLKDVTNVCVPQQVTVGKPISWIS 196

Query: 307 CGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCV-------SSLLGI--QIEGV 357
           CG  HSA +T  G L TFG    G+ G         PN +         + GI  ++  V
Sbjct: 197 CGYYHSAFVTTEGELYTFGEPESGKLGL--------PNQLLCNHRMPQPVPGIPEKVVQV 248

Query: 358 AAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAET-LPRLLDAPSLENVHSKSVSCGAR 416
           A G  HT+ ++    VY FG  QFGQLG G    ET +P++++    + +   S+SCG  
Sbjct: 249 ACGGGHTVVLTEKA-VYTFGLGQFGQLGLGTFLFETSVPKVIEHVKDQKI--SSISCGEN 305

Query: 417 HTAVIADDGKVFCWGWNKYGQLGLG--DVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLA 473
           HTA+I D G ++ +G  +YG+LGLG  +  ++ +P+  +     + + V+CG  H L+ A
Sbjct: 306 HTALITDIGLMYTFGDGRYGKLGLGLENFTNQFLPTLCSHFLRFIAQLVSCGGCHMLVFA 365

Query: 474 VP 475
           VP
Sbjct: 366 VP 367



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 59/170 (34%), Positives = 92/170 (54%), Gaps = 2/170 (1%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           ++CG  H+AV+T    L  FG   +GQ G GS      P CV +L   +++  A G  HT
Sbjct: 40  LSCGDEHTAVVTGNKKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT 99

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           +  +  G VYA GGN  GQLG G  +      L+   + ++   K +S G+  +A + +D
Sbjct: 100 LVSTEGGKVYAAGGNNEGQLGLGDTEERNTFHLISFFTSQH-KIKQLSAGSNTSAALTED 158

Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAV 474
           G++F WG N  GQ+GL DV +  +P QVT+ G     ++CG++H+  +  
Sbjct: 159 GELFMWGDNSEGQIGLKDVTNVCVPQQVTV-GKPISWISCGYYHSAFVTT 207



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 92/331 (27%), Positives = 140/331 (42%), Gaps = 68/331 (20%)

Query: 103 AAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPR 162
           AA G  H +  TEGG+VY  G       G   G L  G   +++ F    SF T Q   +
Sbjct: 92  AACGRNHTLVSTEGGKVYAAG-------GNNEGQLGLGDTEERNTF-HLISFFTSQHKIK 143

Query: 163 SQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLN 218
              + S+   +   DG     G   EG    +I L   T              P  VT+ 
Sbjct: 144 QLSAGSNTSAALTEDGELFMWGDNSEG----QIGLKDVTN----------VCVPQQVTV- 188

Query: 219 PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI----RMVSSPHPIPCIESS 274
            G  I+ ++ G  H+  ++  G+++ +G    G+LGL +++    RM   P P+P I   
Sbjct: 189 -GKPISWISCGYYHSAFVTTEGELYTFGEPESGKLGLPNQLLCNHRM---PQPVPGI--- 241

Query: 275 YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
                                  P   V+ +ACGG H+ V+T+  A+ TFG G +GQ G 
Sbjct: 242 -----------------------PEKVVQ-VACGGGHTVVLTEK-AVYTFGLGQFGQLGL 276

Query: 335 GSTDDELS-PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ--A 391
           G+   E S P  +  +   +I  ++ G  HT  I+  G +Y FG  ++G+LG G +    
Sbjct: 277 GTFLFETSVPKVIEHVKDQKISSISCGENHTALITDIGLMYTFGDGRYGKLGLGLENFTN 336

Query: 392 ETLPRLLDAPSLENVHSKSVSCGARHTAVIA 422
           + LP L          ++ VSCG  H  V A
Sbjct: 337 QFLPTL--CSHFLRFIAQLVSCGGCHMLVFA 365


>gi|380817670|gb|AFE80709.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
          Length = 4829

 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 129/255 (50%), Gaps = 29/255 (11%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           V+IA   + G H LAL+  G+V+ WG G  G+LG G  +     P   P + S++   ++
Sbjct: 496 VKIAA-HSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 549

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                             G +V  IACG  +SA IT  G L T+G G YG+ G GS++DE
Sbjct: 550 ------------------GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 591

Query: 341 LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
             P  V+ L G+++  VA  +G   T+ ++ +G V+++G   +G+LG GG      P+L+
Sbjct: 592 AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLI 651

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGC 457
           +   L+++    V CG++ +  +  DG+V+ WG     +LG G       P  +  ++G 
Sbjct: 652 E--KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGK 709

Query: 458 VPRNVACGWWHTLLL 472
              +VA G  H L L
Sbjct: 710 KVIDVAAGSTHCLAL 724



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 128/303 (42%), Gaps = 80/303 (26%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GGRH  AL+  G+V+ WG G +G+LG  SR+     P  I  +++   +D  
Sbjct: 3042 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRD-- 3098

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                    IACG  HSA +T +G L T+G G YG+ G G    +
Sbjct: 3099 ------------------------IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ 3134

Query: 341  LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V  LLG ++  VA G     T+ ++ +G V+++G   FG+LG GG +   +P+ +
Sbjct: 3135 LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNI 3194

Query: 399  DAPSLE------------------------------------NVHSKS------------ 410
            +  + +                                    +VH +             
Sbjct: 3195 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI 3254

Query: 411  --VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWW 467
              V+ GA H   + D G+V+ WG N +GQ G G       P+ V  +EG     VACG  
Sbjct: 3255 VHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3314

Query: 468  HTL 470
            H++
Sbjct: 3315 HSV 3317



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 144/365 (39%), Gaps = 82/365 (22%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V   +G  HC+A++  GEVY+WG  E         D   G G ++   +R    + E + 
Sbjct: 4037 VAVNSGGKHCLALSSEGEVYSWGEAE---------DGKLGHG-NRSPCDRPR--VIESLR 4084

Query: 161  PRSQVSRSSGGTSSG-TDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
                V  ++GG  S      G      K R   L    +E            P LV    
Sbjct: 4085 GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLK--------PKLVEALQ 4136

Query: 220  GVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
            G R+  +A  +G   TL L+D   VW WG G  G+LG G                   G 
Sbjct: 4137 GHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-------------------GS 4177

Query: 278  DRSAALSRGSVNSEGPGFRVPGNY-------VKGIACGGRHSAVITDAGALLTFGWGLYG 330
            D               G +VP          V  + CG + S  +T +GA+ T+G G Y 
Sbjct: 4178 D---------------GCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4222

Query: 331  QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            + G GS D    P  V  L G ++  +A G  H +C + DG+VY +G N  GQLG G   
Sbjct: 4223 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTN 4282

Query: 391  AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
            A   PRL+ A  L+      V+CG+ HT           W  +K    G        +P+
Sbjct: 4283 AIQRPRLVAA--LQGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPA 4324

Query: 451  QVTIE 455
            QV +E
Sbjct: 4325 QVPME 4329



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 165/400 (41%), Gaps = 60/400 (15%)

Query: 53   GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
              G   A +   K+  WG  +D  Q     G   ++P      +  ++V+ A G     A
Sbjct: 2943 AAGLESAATIRTKVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 3001

Query: 113  VTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG- 171
            VT  G+VY  G      +GR+   +S+GT        RQ + L+  V  +  V+  SGG 
Sbjct: 3002 VTVEGKVYACGE---ATNGRLGLGISSGTV----PIPRQITALSSYVVKK--VAVHSGGR 3052

Query: 172  --TSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIAT 225
              T+   DG+    G G++G         K    S  + D+     P L+      RI  
Sbjct: 3053 HATALTVDGKVFSWGEGDDG---------KLGHFSRMNCDK-----PRLIEALKTKRIRD 3098

Query: 226  VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS-----RIRMVSSPHPIPCIESSYGKDRS 280
            +A G  H+ AL+  G+++ WG G  G+LG G      + +MV        I+ + G   +
Sbjct: 3099 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3158

Query: 281  AALS---RGSVNSEGPG-------------------FRVPGNYVKGIACGGRHSAVITDA 318
              L+    G V S G G                    R+ G  V  I CG + S  +T +
Sbjct: 3159 QTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3218

Query: 319  GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            G + T+G G Y + G GS      P  V  L G +I  VA G  H + ++  G VYA+G 
Sbjct: 3219 GVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGD 3278

Query: 379  NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
            N  GQ G G       P L+    LE      V+CG+ H+
Sbjct: 3279 NDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHS 3316



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 120/268 (44%), Gaps = 42/268 (15%)

Query: 233  TLALSDIGQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAALSRG---- 286
            TL+    G ++GWG+   GQLG   G+++++     P PC   +    R   L  G    
Sbjct: 3940 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKV-----PTPC--EALATLRPVQLIGGEQTL 3992

Query: 287  -SVNSEGPGF-------------------------RVPGNYVKGIAC--GGRHSAVITDA 318
             +V ++G  +                          +   ++K +A   GG+H   ++  
Sbjct: 3993 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4052

Query: 319  GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            G + ++G    G+ G G+      P  + SL GI++  VAAG  H+ C+++ GD+Y +G 
Sbjct: 4053 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGK 4112

Query: 379  NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
             ++G+LG    + +  P+L++A     V   +   G   T  + DD  V+ WG   YG+L
Sbjct: 4113 GRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKL 4172

Query: 439  GLGDVIDRNIPSQV-TIEGCVPRNVACG 465
            G G      +P ++ ++ G     V CG
Sbjct: 4173 GRGGSDGCKVPMKIDSLTGLGVVKVECG 4200



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 92/217 (42%), Gaps = 38/217 (17%)

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
           SS DE   A P LV    G+++  VA  +G   TLA+++ GQVW WG G  G+LG G   
Sbjct: 587 SSEDE---AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG--- 640

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITD 317
                                     GS   + P    ++    V  + CG + S  +T 
Sbjct: 641 --------------------------GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTK 674

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
            G + ++G G   + G G+ +    P  +  L G ++  VAAG  H + ++ D +V+++G
Sbjct: 675 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
            N   Q         T P     P L+  H   ++CG
Sbjct: 735 SND--QCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 120/276 (43%), Gaps = 48/276 (17%)

Query: 205  DENLSAFPCLVTLNP---------GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG- 254
            +E+L+A P L + N          G  I   AAG      +    +V+ WG   + QLG 
Sbjct: 2912 EEDLAAVPFLASDNEEEEDEKGNSGSLIRKKAAGLESAATIR--TKVFVWGLNDKDQLGG 2969

Query: 255  -LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSA 313
              GS+I++            S+ +  SA                  N V+ +A G +   
Sbjct: 2970 LKGSKIKV-----------PSFSETLSAL-----------------NVVQ-VAGGSKSLF 3000

Query: 314  VITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVA--AGLWHTICISSD 370
             +T  G +   G    G+ G G +   +  P  +++L    ++ VA  +G  H   ++ D
Sbjct: 3001 AVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVD 3060

Query: 371  GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
            G V+++G    G+LG         PRL++A  L+    + ++CG+ H+A +   G+++ W
Sbjct: 3061 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEA--LKTKRIRDIACGSSHSAALTSSGELYTW 3118

Query: 431  GWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACG 465
            G  +YG+LG GD   +  P  V +  G     VACG
Sbjct: 3119 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3154



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 82/310 (26%), Positives = 121/310 (39%), Gaps = 47/310 (15%)

Query: 57   AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEG 116
            A A++   K+ +WG  DD G+    S  + + P          I   A G +H  A+T  
Sbjct: 3054 ATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 3112

Query: 117  GEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGT 176
            GE+YTWG  E    GR  G     T L   + +        QV+  S+ +++   T  G 
Sbjct: 3113 GELYTWGLGE---YGR-LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3168

Query: 177  DGR-GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLA 235
                G G+ G   R              G E  +    +  LN G  +  +  G + +LA
Sbjct: 3169 VFSWGDGDFGKLGR-------------GGSEGCNIPQNIERLN-GQGVCQIECGAQFSLA 3214

Query: 236  LSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF 295
            L+  G VW WG G   +LG GS +  V  P  +                         G 
Sbjct: 3215 LTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQVVE------------------------GL 3249

Query: 296  RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
            R  G  +  +A G  H   +TD+G +  +G   +GQ G G+T     P  V  L G +I 
Sbjct: 3250 R--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKIT 3307

Query: 356  GVAAGLWHTI 365
             VA G  H++
Sbjct: 3308 RVACGSSHSV 3317



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 5/73 (6%)

Query: 53   GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
            G  F++A++ S  + TWG  D   LG     S  H   P          ++  A G  HC
Sbjct: 4200 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRRPRQVQGLQGKKVIAIATGSLHC 4256

Query: 111  VAVTEGGEVYTWG 123
            V  TE GEVYTWG
Sbjct: 4257 VCCTEDGEVYTWG 4269


>gi|312381821|gb|EFR27472.1| hypothetical protein AND_05798 [Anopheles darlingi]
          Length = 5197

 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 97/317 (30%), Positives = 138/317 (43%), Gaps = 82/317 (25%)

Query: 212  PCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP 269
            P LV     V I  VA  +GG+H LALS  G+V+ WG G +G+LG G+R           
Sbjct: 4453 PTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNR----------- 4501

Query: 270  CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
                SY  DR   +   S           G  V  IACG  HSA IT  G +LT+G G Y
Sbjct: 4502 ---DSY--DRPKLIEALS-----------GIGVIDIACGSAHSACITSQGHVLTWGKGRY 4545

Query: 330  GQCGQGSTDDELSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTG 387
            G+ G G ++D+L P  V +LLG +   +A  +G   T+CI+ D +V+++G   +G+LG G
Sbjct: 4546 GRLGHGDSEDQLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG 4605

Query: 388  GDQAETLPRLLDA----------------------------------------------- 400
            G     +P  +++                                               
Sbjct: 4606 GSDGCKVPMKIESLAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRP 4665

Query: 401  ---PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEG 456
                +L+     S++ G+ H    +D G+VF WG N  GQLG G V     P  V +++G
Sbjct: 4666 KKVAALQGKKIISIATGSLHCVACSDGGEVFTWGDNDEGQLGDGTVSAIQRPRLVQSLQG 4725

Query: 457  CVPRNVACGWWHTLLLA 473
                 V CG  HTL L+
Sbjct: 4726 KHIVKVICGSAHTLALS 4742



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 128/310 (41%), Gaps = 84/310 (27%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GG+H +AL+  G+V+ WG G +G+LG G+R+ +   P  I  + +   +D  
Sbjct: 3328 VKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLTL-EKPKLIETLRTKRIRD-- 3384

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                    IACG  HSA IT +G L T+G G YG+ G G    +
Sbjct: 3385 ------------------------IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQ 3420

Query: 341  LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQ--------------- 383
            L P  V++L   ++  VA G     T+C++ +G V+++G   FG+               
Sbjct: 3421 LKPKLVTALADHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGGSEGCSIPHQV 3480

Query: 384  -------------------------------------LGTGGDQAETLPRLLDAPSLENV 406
                                                 LG G DQ    P  +    L   
Sbjct: 3481 ERLNGVGVMQIECGAQFSLALTKSGEVWTWGKGDYYRLGHGTDQHVRKPTPIQG--LRGK 3538

Query: 407  HSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACG 465
                V+ GA H   + D G+V+ WG N +GQ G G+ I    PS V  ++G     VACG
Sbjct: 3539 KVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQGSGNTIVNKKPSLVLGLDGIFVNRVACG 3598

Query: 466  WWHTLLLAVP 475
              H++  ++P
Sbjct: 3599 SSHSVAWSLP 3608



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 71/214 (33%), Positives = 102/214 (47%), Gaps = 32/214 (14%)

Query: 221 VRIATVAAG--GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
           V I  +AA   GRH LAL+  G V+ WG G  G+LG G      +S   IP         
Sbjct: 628 VNIVQLAAHCEGRHVLALTATGDVFSWGNGEGGRLGHGD-----TSSKDIPT-------- 674

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
           R  AL+   V               G+ CG  +SA IT AG L T+G G YG+ G G+++
Sbjct: 675 RIVALAERQVT--------------GVFCGSSYSAAITAAGELYTWGRGTYGRLGHGNSE 720

Query: 339 DELSPNCVSSLLGIQIEGVAAGL--WHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPR 396
           D+  P  V  L   ++  VA G    H++C++  G VYA+G   FG+LG G     ++P 
Sbjct: 721 DKHLPTIVQVLKQQRVIHVALGCGDAHSLCVTDTGIVYAWGDGDFGKLGNGTCNGSSVPV 780

Query: 397 LLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
            ++ P   +   K  S G+  +  +  DG V+ W
Sbjct: 781 AIELPQCSDGAVKVFS-GSHFSVALGRDGTVYSW 813



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 94/325 (28%), Positives = 139/325 (42%), Gaps = 52/325 (16%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V   +G  HC+A++  GEV++WG  E         D   G G ++D ++R    L E +S
Sbjct: 4467 VAVNSGGKHCLALSSDGEVFSWGEGE---------DGKLGHG-NRDSYDRPK--LIEALS 4514

Query: 161  PRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPG 220
                +  + G   S           S+   ++  K        GD      P LV    G
Sbjct: 4515 GIGVIDIACGSAHSACIT-------SQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEALLG 4567

Query: 221  VRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPC-IESSYGK 277
             R   +A  +G   TL ++D   VW WG G  G+LG G      S    +P  IES    
Sbjct: 4568 YRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGG-----SDGCKVPMKIES---- 4618

Query: 278  DRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST 337
                               + G  V  + CG + S  +T +G++ T+G G Y + G G+T
Sbjct: 4619 -------------------LAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNT 4659

Query: 338  DDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
            D    P  V++L G +I  +A G  H +  S  G+V+ +G N  GQLG G   A   PRL
Sbjct: 4660 DHVRRPKKVAALQGKKIISIATGSLHCVACSDGGEVFTWGDNDEGQLGDGTVSAIQRPRL 4719

Query: 398  LDAPSLENVHSKSVSCGARHTAVIA 422
            +   SL+  H   V CG+ HT  ++
Sbjct: 4720 VQ--SLQGKHIVKVICGSAHTLALS 4742



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/229 (32%), Positives = 110/229 (48%), Gaps = 36/229 (15%)

Query: 242  VWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPG 299
            ++GWG+   GQLG   GSRI+M     P PC                    E      P 
Sbjct: 4379 IFGWGHNHRGQLGGLDGSRIKM-----PTPC--------------------EALSLLRPI 4413

Query: 300  NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA- 358
                 IA G +    +T  G L   G+G  G+ G G TD   +P  V SL  + I+ VA 
Sbjct: 4414 Q----IAGGEQTLYAVTPDGKLYATGYGAGGRLGIGGTDSVTTPTLVESLQHVMIKKVAV 4469

Query: 359  -AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARH 417
             +G  H + +SSDG+V+++G  + G+LG G   +   P+L++A  L  +    ++CG+ H
Sbjct: 4470 NSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRPKLIEA--LSGIGVIDIACGSAH 4527

Query: 418  TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
            +A I   G V  WG  +YG+LG GD  D+  P  V  + G    ++ACG
Sbjct: 4528 SACITSQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEALLGYRAIDIACG 4576



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 117/250 (46%), Gaps = 30/250 (12%)

Query: 226  VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
            +A G +    +S  G+++  G G  G+LGLG     V +P  +P I S Y   + A  S 
Sbjct: 3279 IAGGSKSLFIVSQDGKLYACGEGTNGRLGLGHN-NNVPTPKQVP-ILSQYVVKKVAVHS- 3335

Query: 286  GSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNC 345
                                  GG+H+  +T  G + ++G G  G+ G G+      P  
Sbjct: 3336 ----------------------GGKHAMALTLDGKVFSWGEGEDGKLGHGNRLTLEKPKL 3373

Query: 346  VSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLEN 405
            + +L   +I  +A G  H+  I+S G++Y +G  ++G+LG G +  +  P+L+ A  L +
Sbjct: 3374 IETLRTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTA--LAD 3431

Query: 406  VHSKSVSCGAR--HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNV 462
                 V+CG+R   T  + ++G VF WG   +G+LG G     +IP QV  + G     +
Sbjct: 3432 HRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGGSEGCSIPHQVERLNGVGVMQI 3491

Query: 463  ACGWWHTLLL 472
             CG   +L L
Sbjct: 3492 ECGAQFSLAL 3501



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 142/345 (41%), Gaps = 58/345 (16%)

Query: 83   GKHGEIPEPFPLPTEAS-IVKAAA---GWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLS 138
            G +  +P P  +P  +  +VK  A   G  H +A+T  G+V++WG  E        G L 
Sbjct: 3309 GHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGE-------DGKLG 3361

Query: 139  TGTGLDKDVFERQSSFLTEQVSPRS-QVSRSSGGTSSGTDGR-GSGEEGSKRRRISLAKQ 196
             G  L  +  +   +  T+++   +   S S+  TSSG     G GE G           
Sbjct: 3362 HGNRLTLEKPKLIETLRTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRL--------- 3412

Query: 197  TAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGR--HTLALSDIGQVWGWGYGGEGQLG 254
                   GD      P LVT     R+  VA G R   TL L++ G V+ WG G  G+LG
Sbjct: 3413 -----GHGDNCTQLKPKLVTALADHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLG 3467

Query: 255  LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAV 314
             G      S PH +                           R+ G  V  I CG + S  
Sbjct: 3468 RGGS-EGCSIPHQVE--------------------------RLNGVGVMQIECGAQFSLA 3500

Query: 315  ITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVY 374
            +T +G + T+G G Y + G G+      P  +  L G ++  VA G  H + ++  G VY
Sbjct: 3501 LTKSGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVY 3560

Query: 375  AFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            A+G N  GQ G+G       P L+    L+ +    V+CG+ H+ 
Sbjct: 3561 AWGDNDHGQQGSGNTIVNKKPSLV--LGLDGIFVNRVACGSSHSV 3603



 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 77/151 (50%)

Query: 307 CGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC 366
           C GRH   +T  G + ++G G  G+ G G T  +  P  + +L   Q+ GV  G  ++  
Sbjct: 637 CEGRHVLALTATGDVFSWGNGEGGRLGHGDTSSKDIPTRIVALAERQVTGVFCGSSYSAA 696

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           I++ G++Y +G   +G+LG G  + + LP ++     + V   ++ CG  H+  + D G 
Sbjct: 697 ITAAGELYTWGRGTYGRLGHGNSEDKHLPTIVQVLKQQRVIHVALGCGDAHSLCVTDTGI 756

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC 457
           V+ WG   +G+LG G     ++P  + +  C
Sbjct: 757 VYAWGDGDFGKLGNGTCNGSSVPVAIELPQC 787



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 96/349 (27%), Positives = 140/349 (40%), Gaps = 70/349 (20%)

Query: 25   PQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDD--LGQSYVTS 82
            P++ PILS  VV+         +     G   AMA++   K+ +WG  +D  LG      
Sbjct: 3317 PKQVPILSQYVVK---------KVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGH----- 3362

Query: 83   GKHGEIPEPFPLPT--EASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTG 140
            G    + +P  + T     I   A G +H  A+T  GE+YTWG  E       +G L  G
Sbjct: 3363 GNRLTLEKPKLIETLRTKRIRDIACGSSHSAAITSSGELYTWGLGE-------YGRLGHG 3415

Query: 141  ---TGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGR-GSGEEGSKRRRISLAKQ 196
               T L   +    +     QV+  S+ +++   T  G     G G+ G   R       
Sbjct: 3416 DNCTQLKPKLVTALADHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGR------- 3468

Query: 197  TAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLG 256
                   G E  S  P  V    GV +  +  G + +LAL+  G+VW WG G   +LG G
Sbjct: 3469 ------GGSEGCS-IPHQVERLNGVGVMQIECGAQFSLALTKSGEVWTWGKGDYYRLGHG 3521

Query: 257  SRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVIT 316
            +  + V  P PI                         G R  G  V  +A G  H   +T
Sbjct: 3522 TD-QHVRKPTPIQ------------------------GLR--GKKVIHVAVGALHCLAVT 3554

Query: 317  DAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTI 365
            D+G +  +G   +GQ G G+T     P+ V  L GI +  VA G  H++
Sbjct: 3555 DSGQVYAWGDNDHGQQGSGNTIVNKKPSLVLGLDGIFVNRVACGSSHSV 3603



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 58/244 (23%), Positives = 101/244 (41%), Gaps = 44/244 (18%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
           GD +    P  +      ++  V  G  ++ A++  G+++ WG G  G+LG G+     S
Sbjct: 665 GDTSSKDIPTRIVALAERQVTGVFCGSSYSAAITAAGELYTWGRGTYGRLGHGN-----S 719

Query: 264 SPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLT 323
               +P I     + R   ++ G                    CG  HS  +TD G +  
Sbjct: 720 EDKHLPTIVQVLKQQRVIHVALG--------------------CGDAHSLCVTDTGIVYA 759

Query: 324 FGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE---------GVAAGLWHTICISSDGDVY 374
           +G G +G+ G G+        C  S + + IE          V +G   ++ +  DG VY
Sbjct: 760 WGDGDFGKLGNGT--------CNGSSVPVAIELPQCSDGAVKVFSGSHFSVALGRDGTVY 811

Query: 375 AFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNK 434
           ++G    G+LG G  +    P+ + A  LE  +   ++ G  H   +   G+++ WG N 
Sbjct: 812 SWGKGHGGRLGHGHSEHTASPKAIQA--LEGKNIVDLAVGLAHCLALTASGELYGWGRND 869

Query: 435 YGQL 438
           + QL
Sbjct: 870 FQQL 873



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 140/328 (42%), Gaps = 64/328 (19%)

Query: 89  PEPFPLPTEASIVKAAAGWA--HCVAVTEGGEVYTWGWKECVPSGRV-FGDLSTGTGLDK 145
           P+P       +IV+ AA     H +A+T  G+V++WG  E    GR+  GD S+     K
Sbjct: 619 PKPIEGLESVNIVQLAAHCEGRHVLALTATGDVFSWGNGE---GGRLGHGDTSS-----K 670

Query: 146 DVFERQSSFLTEQVS-PRSQVSRSSGGTSSG---TDGRGS-GEEGSKRRRISLAKQTAES 200
           D+  R  +    QV+      S S+  T++G   T GRG+ G  G               
Sbjct: 671 DIPTRIVALAERQVTGVFCGSSYSAAITAAGELYTWGRGTYGRLGH-------------- 716

Query: 201 SSSGDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSR 258
            +S D++L   P +V +    R+  VA   G  H+L ++D G V+ WG G  G+LG G+ 
Sbjct: 717 GNSEDKHL---PTIVQVLKQQRVIHVALGCGDAHSLCVTDTGIVYAWGDGDFGKLGNGT- 772

Query: 259 IRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDA 318
               S P  I   + S G  +                         +  G   S  +   
Sbjct: 773 CNGSSVPVAIELPQCSDGAVK-------------------------VFSGSHFSVALGRD 807

Query: 319 GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           G + ++G G  G+ G G ++   SP  + +L G  I  +A GL H + +++ G++Y +G 
Sbjct: 808 GTVYSWGKGHGGRLGHGHSEHTASPKAIQALEGKNIVDLAVGLAHCLALTASGELYGWGR 867

Query: 379 NQFGQL---GTGGDQAETLPRLLDAPSL 403
           N F QL       D    LP L   P+L
Sbjct: 868 NDFQQLCPPCVTRDPIVLLPILTTPPTL 895



 Score = 40.0 bits (92), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 25/102 (24%), Positives = 45/102 (44%), Gaps = 6/102 (5%)

Query: 351 GIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
           G+Q+  VA        +++ G V +   +      T      T P+ ++     N+   +
Sbjct: 581 GVQVRQVACSETSIYILTTTGQVLSLQHSNCHTPDT------TAPKPIEGLESVNIVQLA 634

Query: 411 VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
             C  RH   +   G VF WG  + G+LG GD   ++IP+++
Sbjct: 635 AHCEGRHVLALTATGDVFSWGNGEGGRLGHGDTSSKDIPTRI 676


>gi|148689921|gb|EDL21868.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
           RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_a [Mus
           musculus]
          Length = 4902

 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 86/292 (29%), Positives = 145/292 (49%), Gaps = 31/292 (10%)

Query: 186 SKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAA--GGRHTLALSDIGQVW 243
           +++R + L++     + + + ++ A P LV       I  +AA   G H LAL+  G+V+
Sbjct: 528 AEKRFLILSRNGRVYTQAYNSDMLA-PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY 586

Query: 244 GWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVK 303
            WG G  G+LG G  +     P   P + S++   ++                  G +V 
Sbjct: 587 SWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA------------------GKHVV 623

Query: 304 GIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA--AGL 361
            IACG  +SA IT  G L T+G G YG+ G GS++DE  P  V+ L G+++  VA  +G 
Sbjct: 624 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGD 683

Query: 362 WHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
             T+ ++ +G V+++G   +G+LG GG      P+L++   L+++    V CG++ +  +
Sbjct: 684 AQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE--KLQDLDVIKVRCGSQFSIAL 741

Query: 422 ADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
             DG+V+ WG     +LG G       P  +  ++G    +VA G  H L L
Sbjct: 742 TKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 793



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 128/303 (42%), Gaps = 80/303 (26%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GGRH  AL+  G+V+ WG G +G+LG  SR+     P  I  +++   +D  
Sbjct: 3114 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRD-- 3170

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                    IACG  HSA +T +G L T+G G YG+ G G    +
Sbjct: 3171 ------------------------IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ 3206

Query: 341  LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V  LLG ++  VA G     T+ ++ +G V+++G   FG+LG GG +   +P+ +
Sbjct: 3207 LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNI 3266

Query: 399  DAPSLE------------------------------------NVHSKS------------ 410
            +  + +                                    +VH +             
Sbjct: 3267 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI 3326

Query: 411  --VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWW 467
              V+ GA H   + D G+V+ WG N +GQ G G       P+ V  +EG     VACG  
Sbjct: 3327 VHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3386

Query: 468  HTL 470
            H++
Sbjct: 3387 HSV 3389



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 144/365 (39%), Gaps = 82/365 (22%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V   +G  HC+A++  GEVY+WG  E         D   G G ++   +R    + E + 
Sbjct: 4110 VAVNSGGKHCLALSSEGEVYSWGEAE---------DGKLGHG-NRSPCDRPR--VIESLR 4157

Query: 161  PRSQVSRSSGGTSSG-TDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
                V  ++GG  S      G      K R   L    +E            P LV    
Sbjct: 4158 GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLK--------PKLVEALQ 4209

Query: 220  GVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
            G R+  +A  +G   TL L+D   VW WG G  G+LG G                   G 
Sbjct: 4210 GHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-------------------GS 4250

Query: 278  DRSAALSRGSVNSEGPGFRVPGNY-------VKGIACGGRHSAVITDAGALLTFGWGLYG 330
            D               G +VP          V  + CG + S  +T +GA+ T+G G Y 
Sbjct: 4251 D---------------GCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4295

Query: 331  QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            + G GS D    P  V  L G ++  +A G  H +C + DG+VY +G N  GQLG G   
Sbjct: 4296 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTN 4355

Query: 391  AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
            A   PRL+ A  L+      V+CG+ HT           W  +K    G        +P+
Sbjct: 4356 AIQRPRLVAA--LQGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPA 4397

Query: 451  QVTIE 455
            QV +E
Sbjct: 4398 QVPME 4402



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 163/389 (41%), Gaps = 60/389 (15%)

Query: 65   KLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGW 124
            K+  WG  +D  Q     G   ++P      +  ++V+ A G     AVT  G+VY+ G 
Sbjct: 3027 KVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGE 3085

Query: 125  KECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG---TSSGTDGR-- 179
                 +GR+   +S+GT        RQ + L+  V  +  V+  SGG   T+   DG+  
Sbjct: 3086 ---ATNGRLGLGMSSGTV----PIPRQITALSSYVVKK--VAVHSGGRHATALTVDGKVF 3136

Query: 180  --GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS 237
              G G++G         K    S  + D+     P L+      RI  +A G  H+ AL+
Sbjct: 3137 SWGEGDDG---------KLGHFSRMNCDK-----PRLIEALKTKRIRDIACGSSHSAALT 3182

Query: 238  DIGQVWGWGYGGEGQLGLGS-----RIRMVSSPHPIPCIESSYGKDRSAALS---RGSVN 289
              G+++ WG G  G+LG G      + +MV        I+ + G   +  L+    G V 
Sbjct: 3183 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 3242

Query: 290  SEGPG-------------------FRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
            S G G                    R+ G  V  I CG + S  +T +G + T+G G Y 
Sbjct: 3243 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 3302

Query: 331  QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            + G GS      P  V  L G +I  VA G  H + ++  G VYA+G N  GQ G G   
Sbjct: 3303 RLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTT 3362

Query: 391  AETLPRLLDAPSLENVHSKSVSCGARHTA 419
                P L+    LE      V+CG+ H+ 
Sbjct: 3363 VNRKPTLVQG--LEGQKITRVACGSSHSV 3389



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 120/268 (44%), Gaps = 42/268 (15%)

Query: 233  TLALSDIGQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAALSRG---- 286
            TL+    G ++GWG+   GQLG   G+++++     P PC   +    R   L  G    
Sbjct: 4013 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKV-----PTPC--EALATLRPVQLIGGEQTL 4065

Query: 287  -SVNSEGPGF-------------------------RVPGNYVKGIAC--GGRHSAVITDA 318
             +V ++G  +                          +   ++K +A   GG+H   ++  
Sbjct: 4066 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4125

Query: 319  GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            G + ++G    G+ G G+      P  + SL GI++  VAAG  H+ C+++ GD+Y +G 
Sbjct: 4126 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGK 4185

Query: 379  NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
             ++G+LG    + +  P+L++A     V   +   G   T  + DD  V+ WG   YG+L
Sbjct: 4186 GRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKL 4245

Query: 439  GLGDVIDRNIPSQV-TIEGCVPRNVACG 465
            G G      +P ++ ++ G     V CG
Sbjct: 4246 GRGGSDGCKVPMKIDSLTGLGVVKVECG 4273



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 93/217 (42%), Gaps = 38/217 (17%)

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
           SS DE   A P LV    G+++  VA  +G   TLA+++ GQVW WG G  G+LG G   
Sbjct: 656 SSEDE---AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG--- 709

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITD 317
                                     GS   + P    ++    V  + CG + S  +T 
Sbjct: 710 --------------------------GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTK 743

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
            G + ++G G   + G G+ +    P  +  L G ++  VAAG  H + ++ D +V+++G
Sbjct: 744 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 803

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
            N   Q         T P     P L++ H   ++CG
Sbjct: 804 SND--QCQHFDTLRVTKPEPTALPGLDSKHIVGIACG 838



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 83/168 (49%), Gaps = 6/168 (3%)

Query: 302  VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVA-- 358
            V  +A G +    +T  G + + G    G+ G G +   +  P  +++L    ++ VA  
Sbjct: 3061 VVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVH 3120

Query: 359  AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
            +G  H   ++ DG V+++G    G+LG         PRL++A  L+    + ++CG+ H+
Sbjct: 3121 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA--LKTKRIRDIACGSSHS 3178

Query: 419  AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACG 465
            A +   G+++ WG  +YG+LG GD   +  P  V +  G     VACG
Sbjct: 3179 AALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3226



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 5/73 (6%)

Query: 53   GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
            G  F++A++ S  + TWG  D   LG     S  H   P          ++  A G  HC
Sbjct: 4273 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRRPRQVQGLQGKKVIAIATGSLHC 4329

Query: 111  VAVTEGGEVYTWG 123
            V  TE GEVYTWG
Sbjct: 4330 VCCTEDGEVYTWG 4342


>gi|148689922|gb|EDL21869.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
           RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_b [Mus
           musculus]
          Length = 4841

 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 86/292 (29%), Positives = 145/292 (49%), Gaps = 31/292 (10%)

Query: 186 SKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAA--GGRHTLALSDIGQVW 243
           +++R + L++     + + + ++ A P LV       I  +AA   G H LAL+  G+V+
Sbjct: 465 AEKRFLILSRNGRVYTQAYNSDMLA-PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY 523

Query: 244 GWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVK 303
            WG G  G+LG G  +     P   P + S++   ++                  G +V 
Sbjct: 524 SWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA------------------GKHVV 560

Query: 304 GIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA--AGL 361
            IACG  +SA IT  G L T+G G YG+ G GS++DE  P  V+ L G+++  VA  +G 
Sbjct: 561 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGD 620

Query: 362 WHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
             T+ ++ +G V+++G   +G+LG GG      P+L++   L+++    V CG++ +  +
Sbjct: 621 AQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE--KLQDLDVIKVRCGSQFSIAL 678

Query: 422 ADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
             DG+V+ WG     +LG G       P  +  ++G    +VA G  H L L
Sbjct: 679 TKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 730



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 128/303 (42%), Gaps = 80/303 (26%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GGRH  AL+  G+V+ WG G +G+LG  SR+     P  I  +++   +D  
Sbjct: 3053 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRD-- 3109

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                    IACG  HSA +T +G L T+G G YG+ G G    +
Sbjct: 3110 ------------------------IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ 3145

Query: 341  LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V  LLG ++  VA G     T+ ++ +G V+++G   FG+LG GG +   +P+ +
Sbjct: 3146 LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNI 3205

Query: 399  DAPSLE------------------------------------NVHSKS------------ 410
            +  + +                                    +VH +             
Sbjct: 3206 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI 3265

Query: 411  --VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWW 467
              V+ GA H   + D G+V+ WG N +GQ G G       P+ V  +EG     VACG  
Sbjct: 3266 VHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3325

Query: 468  HTL 470
            H++
Sbjct: 3326 HSV 3328



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 144/365 (39%), Gaps = 82/365 (22%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V   +G  HC+A++  GEVY+WG  E         D   G G ++   +R    + E + 
Sbjct: 4049 VAVNSGGKHCLALSSEGEVYSWGEAE---------DGKLGHG-NRSPCDRPR--VIESLR 4096

Query: 161  PRSQVSRSSGGTSSG-TDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
                V  ++GG  S      G      K R   L    +E            P LV    
Sbjct: 4097 GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLK--------PKLVEALQ 4148

Query: 220  GVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
            G R+  +A  +G   TL L+D   VW WG G  G+LG G                   G 
Sbjct: 4149 GHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-------------------GS 4189

Query: 278  DRSAALSRGSVNSEGPGFRVPGNY-------VKGIACGGRHSAVITDAGALLTFGWGLYG 330
            D               G +VP          V  + CG + S  +T +GA+ T+G G Y 
Sbjct: 4190 D---------------GCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4234

Query: 331  QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            + G GS D    P  V  L G ++  +A G  H +C + DG+VY +G N  GQLG G   
Sbjct: 4235 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTN 4294

Query: 391  AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
            A   PRL+ A  L+      V+CG+ HT           W  +K    G        +P+
Sbjct: 4295 AIQRPRLVAA--LQGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPA 4336

Query: 451  QVTIE 455
            QV +E
Sbjct: 4337 QVPME 4341



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 163/389 (41%), Gaps = 60/389 (15%)

Query: 65   KLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGW 124
            K+  WG  +D  Q     G   ++P      +  ++V+ A G     AVT  G+VY+ G 
Sbjct: 2966 KVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGE 3024

Query: 125  KECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG---TSSGTDGR-- 179
                 +GR+   +S+GT        RQ + L+  V  +  V+  SGG   T+   DG+  
Sbjct: 3025 ---ATNGRLGLGMSSGTV----PIPRQITALSSYVVKK--VAVHSGGRHATALTVDGKVF 3075

Query: 180  --GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS 237
              G G++G         K    S  + D+     P L+      RI  +A G  H+ AL+
Sbjct: 3076 SWGEGDDG---------KLGHFSRMNCDK-----PRLIEALKTKRIRDIACGSSHSAALT 3121

Query: 238  DIGQVWGWGYGGEGQLGLGS-----RIRMVSSPHPIPCIESSYGKDRSAALS---RGSVN 289
              G+++ WG G  G+LG G      + +MV        I+ + G   +  L+    G V 
Sbjct: 3122 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 3181

Query: 290  SEGPG-------------------FRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
            S G G                    R+ G  V  I CG + S  +T +G + T+G G Y 
Sbjct: 3182 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 3241

Query: 331  QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            + G GS      P  V  L G +I  VA G  H + ++  G VYA+G N  GQ G G   
Sbjct: 3242 RLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTT 3301

Query: 391  AETLPRLLDAPSLENVHSKSVSCGARHTA 419
                P L+    LE      V+CG+ H+ 
Sbjct: 3302 VNRKPTLVQG--LEGQKITRVACGSSHSV 3328



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/276 (25%), Positives = 123/276 (44%), Gaps = 50/276 (18%)

Query: 225  TVAAGGRHTLALSDIGQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAA 282
            T++AGG         G ++GWG+   GQLG   G+++++     P PC   +    R   
Sbjct: 3952 TLSAGGS--------GTIYGWGHNHRGQLGGIEGAKVKV-----PTPC--EALATLRPVQ 3996

Query: 283  LSRG-----SVNSEGPGF-------------------------RVPGNYVKGIAC--GGR 310
            L  G     +V ++G  +                          +   ++K +A   GG+
Sbjct: 3997 LIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGK 4056

Query: 311  HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
            H   ++  G + ++G    G+ G G+      P  + SL GI++  VAAG  H+ C+++ 
Sbjct: 4057 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAA 4116

Query: 371  GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
            GD+Y +G  ++G+LG    + +  P+L++A     V   +   G   T  + DD  V+ W
Sbjct: 4117 GDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSW 4176

Query: 431  GWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
            G   YG+LG G      +P ++ ++ G     V CG
Sbjct: 4177 GDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECG 4212



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 93/217 (42%), Gaps = 38/217 (17%)

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
           SS DE   A P LV    G+++  VA  +G   TLA+++ GQVW WG G  G+LG G   
Sbjct: 593 SSEDE---AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG--- 646

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITD 317
                                     GS   + P    ++    V  + CG + S  +T 
Sbjct: 647 --------------------------GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTK 680

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
            G + ++G G   + G G+ +    P  +  L G ++  VAAG  H + ++ D +V+++G
Sbjct: 681 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 740

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
            N   Q         T P     P L++ H   ++CG
Sbjct: 741 SND--QCQHFDTLRVTKPEPTALPGLDSKHIVGIACG 775



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 83/168 (49%), Gaps = 6/168 (3%)

Query: 302  VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVA-- 358
            V  +A G +    +T  G + + G    G+ G G +   +  P  +++L    ++ VA  
Sbjct: 3000 VVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVH 3059

Query: 359  AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
            +G  H   ++ DG V+++G    G+LG         PRL++A  L+    + ++CG+ H+
Sbjct: 3060 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA--LKTKRIRDIACGSSHS 3117

Query: 419  AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACG 465
            A +   G+++ WG  +YG+LG GD   +  P  V +  G     VACG
Sbjct: 3118 AALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3165



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 5/73 (6%)

Query: 53   GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
            G  F++A++ S  + TWG  D   LG     S  H   P          ++  A G  HC
Sbjct: 4212 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRRPRQVQGLQGKKVIAIATGSLHC 4268

Query: 111  VAVTEGGEVYTWG 123
            V  TE GEVYTWG
Sbjct: 4269 VCCTEDGEVYTWG 4281


>gi|348527836|ref|XP_003451425.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Oreochromis
           niloticus]
          Length = 4833

 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 81/266 (30%), Positives = 134/266 (50%), Gaps = 30/266 (11%)

Query: 212 PCLVTLNPGVRIATVAA--GGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP 269
           P L+ +    +I  +AA   G+H LALS  G+V+ WG G  G+LG G    +   P  I 
Sbjct: 475 PMLIHVLSSRKIVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDTTYL-EEPKMI- 532

Query: 270 CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
                           G+ N      +  G +V  +ACG  +SA IT  G L T+G G Y
Sbjct: 533 ----------------GTFNG-----KQAGKHVVHVACGSTYSAAITADGELYTWGRGNY 571

Query: 330 GQCGQGSTDDELSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTG 387
           G+ G GS++D+ +P  V++  G+++  VA  +G   T+ ++ +G V+++G   +G+LG G
Sbjct: 572 GRLGHGSSEDQTTPMVVTAFKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 631

Query: 388 GDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
           G      P+L++   L+++    V CG++ +  +  DG+V+ WG     +LG G      
Sbjct: 632 GSDGCKTPKLVE--KLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVR 689

Query: 448 IPSQV-TIEGCVPRNVACGWWHTLLL 472
            P  + +++G    +VA G  H L L
Sbjct: 690 YPKLLDSLQGKKVVDVAVGSTHCLAL 715



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/306 (27%), Positives = 130/306 (42%), Gaps = 80/306 (26%)

Query: 218  NPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
            N  ++   V +GGRH +AL+  G+V+ WG G +G+LG  SR+     P  I  +++   +
Sbjct: 3041 NYVIKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIR 3099

Query: 278  DRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST 337
            D                          IACG  HSA IT +G L ++G G YG+ G G  
Sbjct: 3100 D--------------------------IACGSSHSAAITSSGELYSWGLGEYGRLGHGDN 3133

Query: 338  DDELSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLP 395
              +L P  V  LLG ++  VA G     T+ ++ +G V+++G   FG+LG GG +   +P
Sbjct: 3134 TTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGFVFSWGDGDFGKLGRGGSEGCNVP 3193

Query: 396  RLLDAPSLE------------------------------------NVHSKS--------- 410
            + ++  + +                                    +VH +          
Sbjct: 3194 QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRG 3253

Query: 411  -----VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVAC 464
                 V+ GA H   + D G+V+ WG N +GQ G G       P+ V  +EG     VAC
Sbjct: 3254 KKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVAC 3313

Query: 465  GWWHTL 470
            G  H++
Sbjct: 3314 GSSHSV 3319



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 105/357 (29%), Positives = 145/357 (40%), Gaps = 66/357 (18%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V   +G  HC+A++  GEVY+WG  E         D   G G ++   +R    + E + 
Sbjct: 4041 VAVNSGGKHCLALSSEGEVYSWGEAE---------DGKLGHG-NRSPCDRPR--VIESLR 4088

Query: 161  PRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPG 220
                V  ++GG  S      SGE        +  K        GD      P LV    G
Sbjct: 4089 GVEVVDIAAGGAHSACIT-ASGE------LFTWGKGRYGRLGHGDSEDQLKPKLVDALQG 4141

Query: 221  VRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
             R+  VA  +G   TL L+D   VW WG G  G+LG G      S    IP    S    
Sbjct: 4142 HRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGG-----SDGCKIPMKIDS---- 4192

Query: 279  RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
                              + G  V  + CG + S  +T +GA+ T+G G Y + G GS D
Sbjct: 4193 ------------------LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4234

Query: 339  DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
                P  V  L G ++  +A G  H +C + DG+VY +G N  GQLG G   A   PRL+
Sbjct: 4235 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4294

Query: 399  DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
             A  L+      V+CG+ HT           W  +K    G        +P+QV +E
Sbjct: 4295 AA--LQGKKINRVACGSAHT---------LAWSTSKPTNAG-------KLPAQVPME 4333



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 108/399 (27%), Positives = 164/399 (41%), Gaps = 60/399 (15%)

Query: 55   GFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVT 114
            G   A +   K+  WG  +D  Q     G   ++P      +  ++V+ A G     AVT
Sbjct: 2947 GLESAATIRTKVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT 3005

Query: 115  EGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSS 174
              G++Y  G      +GR+   LS+GT        RQ + L+  V  +  V+  SGG  +
Sbjct: 3006 VEGKIYACGE---ATNGRLGLGLSSGTI----PIPRQITALSNYVIKK--VAVHSGGRHA 3056

Query: 175  ---GTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVA 227
                 DG+    G G++G         K    S  + D+     P L+      RI  +A
Sbjct: 3057 MALTVDGKVFSWGEGDDG---------KLGHFSRMNCDK-----PRLIEALKTKRIRDIA 3102

Query: 228  AGGRHTLALSDIGQVWGWGYGGEGQLGLGS-----RIRMVSSPHPIPCIESSYGKDRSAA 282
             G  H+ A++  G+++ WG G  G+LG G      R ++V        I+ + G   +  
Sbjct: 3103 CGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQT 3162

Query: 283  LS---RGSVNSEGPG-------------------FRVPGNYVKGIACGGRHSAVITDAGA 320
            L+    G V S G G                    R+ G  V  I CG + S  +T +G 
Sbjct: 3163 LALTDEGFVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGV 3222

Query: 321  LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
            + T+G G Y + G G+      P  V  L G +I  VA G  H + ++  G VYA+G N 
Sbjct: 3223 VWTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDND 3282

Query: 381  FGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
             GQ G G       P L+    LE      V+CG+ H+ 
Sbjct: 3283 HGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 3319



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 69/271 (25%), Positives = 130/271 (47%), Gaps = 40/271 (14%)

Query: 225  TVAAGGRHTLALSDIGQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIE--SSYGKDRS 280
            T++AGG         G ++GWG+   GQLG   G+++++ +S   +  +      G +++
Sbjct: 3944 TLSAGGS--------GTIYGWGHNHRGQLGGIEGAKVKVPTSTEALATLRPVQLIGGEQT 3995

Query: 281  --AALSRGSVNSEG-----------------PGF--RVPGNYVKGIAC--GGRHSAVITD 317
              A  + G + + G                 P     +   +++ +A   GG+H   ++ 
Sbjct: 3996 LFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSS 4055

Query: 318  AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
             G + ++G    G+ G G+      P  + SL G+++  +AAG  H+ CI++ G+++ +G
Sbjct: 4056 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWG 4115

Query: 378  GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGA--RHTAVIADDGKVFCWGWNKY 435
              ++G+LG G  + +  P+L+DA  L+      V+CG+    T  + DD  V+ WG   Y
Sbjct: 4116 KGRYGRLGHGDSEDQLKPKLVDA--LQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDY 4173

Query: 436  GQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
            G+LG G      IP ++ ++ G     V CG
Sbjct: 4174 GKLGRGGSDGCKIPMKIDSLTGLGVVKVECG 4204



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 95/227 (41%), Gaps = 52/227 (22%)

Query: 212 PCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP 269
           P +VT   G+++  VA  +G   TLA+++ GQVW WG G  G+LG G             
Sbjct: 585 PMVVTAFKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG------------- 631

Query: 270 CIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITDAGALLTFGWG 327
                           GS   + P    ++    +  + CG + S  +T  G + T+G G
Sbjct: 632 ----------------GSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKG 675

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN----QFGQ 383
              + G G+ +    P  + SL G ++  VA G  H + ++ DG+V ++G N     F  
Sbjct: 676 DNQRLGHGTDEHVRYPKLLDSLQGKKVVDVAVGSTHCLALTDDGEVLSWGSNDKLQHFDT 735

Query: 384 LGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
           L +   Q + L      P L + H   +SCG          G+ F W
Sbjct: 736 LFSNKKQPKAL------PGLNSKHIVGISCGP---------GQSFAW 767



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 119/274 (43%), Gaps = 44/274 (16%)

Query: 205  DENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDI-------GQVWGWGYGGEGQLG--L 255
            DE+L+  P L + N        AAG       S +        +V+ WG   + QLG   
Sbjct: 2914 DEDLATVPFLASDNEEEDDEKTAAGSLARKKPSGLESAATIRTKVFVWGLNDKDQLGGLK 2973

Query: 256  GSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVI 315
            GS+I++            S+ +  SA                  N V+ +A G +    +
Sbjct: 2974 GSKIKV-----------PSFSETLSAL-----------------NVVQ-VAGGSKSLFAV 3004

Query: 316  TDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVA--AGLWHTICISSDGD 372
            T  G +   G    G+ G G +   +  P  +++L    I+ VA  +G  H + ++ DG 
Sbjct: 3005 TVEGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVIKKVAVHSGGRHAMALTVDGK 3064

Query: 373  VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGW 432
            V+++G    G+LG         PRL++A  L+    + ++CG+ H+A I   G+++ WG 
Sbjct: 3065 VFSWGEGDDGKLGHFSRMNCDKPRLIEA--LKTKRIRDIACGSSHSAAITSSGELYSWGL 3122

Query: 433  NKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACG 465
             +YG+LG GD   +  P  V +  G     VACG
Sbjct: 3123 GEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACG 3156



 Score = 42.0 bits (97), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 3/78 (3%)

Query: 48  DVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAA 105
           D+    CG  F++A++   ++ TWG  D+    + T  +H   P+         +V  A 
Sbjct: 649 DIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTD-EHVRYPKLLDSLQGKKVVDVAV 707

Query: 106 GWAHCVAVTEGGEVYTWG 123
           G  HC+A+T+ GEV +WG
Sbjct: 708 GSTHCLALTDDGEVLSWG 725



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 5/73 (6%)

Query: 53   GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
            G  F++A++ S  + TWG  D   LG     S  H   P          ++  A G  HC
Sbjct: 4204 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRRPRQVQGLQGKKVIAIATGSLHC 4260

Query: 111  VAVTEGGEVYTWG 123
            V  TE GEVYTWG
Sbjct: 4261 VCCTEDGEVYTWG 4273



 Score = 39.7 bits (91), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 72/149 (48%), Gaps = 3/149 (2%)

Query: 324  FGWGL--YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
            +GWG    GQ G         P    +L  ++   +  G      +++DG +YA G    
Sbjct: 3954 YGWGHNHRGQLGGIEGAKVKVPTSTEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4013

Query: 382  GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
            G+LG GG ++ + P LL++     +   +V+ G +H   ++ +G+V+ WG  + G+LG G
Sbjct: 4014 GRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG 4073

Query: 442  DVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            +    + P  + ++ G    ++A G  H+
Sbjct: 4074 NRSPCDRPRVIESLRGVEVVDIAAGGAHS 4102


>gi|225464728|ref|XP_002264236.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Vitis
           vinifera]
          Length = 489

 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 80/259 (30%), Positives = 130/259 (50%), Gaps = 34/259 (13%)

Query: 214 LVTLNPGV-RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG----------------LG 256
           L TLNP +  I + A GG H++ALS +GQV+ WGYGG G LG                  
Sbjct: 132 LPTLNPNLDSIRSTALGGVHSVALSSLGQVFTWGYGGFGALGHSVYHRELLPRMVEGSWN 191

Query: 257 SRIRMVSSP--HPIPCIES----SYGKDR---SAALSRGSVNSEGPGFRVPGNY------ 301
           ++IR +++   H     ES    ++G+D+      L      +EG G  +P         
Sbjct: 192 AKIRHIATAGTHTAAITESGELYTWGRDQGDGRLGLGPNCGPNEGGGLSIPSKVKALPVP 251

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V  ++CGG  + V+T  G L  +G     + G+G       P  + SL  ++I  +A+G 
Sbjct: 252 VAAVSCGGFFTMVLTQEGQLWNWGANSNYELGRGDKVGGWKPQPIPSLQDVRIIQIASGG 311

Query: 362 WHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
           +H++ ++ DG V ++G  Q GQLG    + + +P +++A  L + H   ++CG   +A I
Sbjct: 312 YHSLALTDDGKVLSWGYGQHGQLGHSSIENQKIPTVIEA--LADEHVIYIACGGSSSAAI 369

Query: 422 ADDGKVFCWGWNKYGQLGL 440
            D+GK++ WG  K  QLG+
Sbjct: 370 TDNGKLYMWGNAKDSQLGV 388



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 127/278 (45%), Gaps = 49/278 (17%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAAL-- 283
           ++ G  H+  + D G++W WG G  G+LG G        P  +P +  +    RS AL  
Sbjct: 96  ISCGLFHSSLVVD-GKLWIWGKGDGGRLGFGQEY-----PAFLPTLNPNLDSIRSTALGG 149

Query: 284 -------SRGSVNSEGPG----------------FRVPGNY---VKGIACGGRHSAVITD 317
                  S G V + G G                  V G++   ++ IA  G H+A IT+
Sbjct: 150 VHSVALSSLGQVFTWGYGGFGALGHSVYHRELLPRMVEGSWNAKIRHIATAGTHTAAITE 209

Query: 318 AGALLTFG-------WGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
           +G L T+G        GL   CG         P+ V + L + +  V+ G + T+ ++ +
Sbjct: 210 SGELYTWGRDQGDGRLGLGPNCGPNEGGGLSIPSKVKA-LPVPVAAVSCGGFFTMVLTQE 268

Query: 371 GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
           G ++ +G N   +LG G       P+ +  PSL++V    ++ G  H+  + DDGKV  W
Sbjct: 269 GQLWNWGANSNYELGRGDKVGGWKPQPI--PSLQDVRIIQIASGGYHSLALTDDGKVLSW 326

Query: 431 GWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNV---ACG 465
           G+ ++GQLG   + ++ IP+   IE     +V   ACG
Sbjct: 327 GYGQHGQLGHSSIENQKIPT--VIEALADEHVIYIACG 362



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 100/395 (25%), Positives = 156/395 (39%), Gaps = 77/395 (19%)

Query: 54  CG-FAMAISDSRKLITWGSTDD----LGQSYVTSGKHGEIPEPFPL--PTEASIVKAAAG 106
           CG F  ++    KL  WG  D      GQ Y         P   P   P   SI   A G
Sbjct: 98  CGLFHSSLVVDGKLWIWGKGDGGRLGFGQEY---------PAFLPTLNPNLDSIRSTALG 148

Query: 107 WAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVS 166
             H VA++  G+V+TWG+         FG       L   V+ R+   L  ++   S  +
Sbjct: 149 GVHSVALSSLGQVFTWGYGG-------FG------ALGHSVYHRE---LLPRMVEGSWNA 192

Query: 167 RSSGGTSSGTDGRGSGEEGSKRR--------RISLAKQTAESSSSGDENLSAFPCLVTLN 218
           +     ++GT      E G            R+ L      +   G     + P  V   
Sbjct: 193 KIRHIATAGTHTAAITESGELYTWGRDQGDGRLGLGPNCGPNEGGG----LSIPSKVKAL 248

Query: 219 PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
           P V +A V+ GG  T+ L+  GQ+W WG     +LG G ++     P PIP ++      
Sbjct: 249 P-VPVAAVSCGGFFTMVLTQEGQLWNWGANSNYELGRGDKVGGWK-PQPIPSLQDVR--- 303

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
                                  +  IA GG HS  +TD G +L++G+G +GQ G  S +
Sbjct: 304 -----------------------IIQIASGGYHSLALTDDGKVLSWGYGQHGQLGHSSIE 340

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGG-DQAETLP-- 395
           ++  P  + +L    +  +A G   +  I+ +G +Y +G  +  QLG  G  + + LP  
Sbjct: 341 NQKIPTVIEALADEHVIYIACGGSSSAAITDNGKLYMWGNAKDSQLGVPGLPETQPLPVE 400

Query: 396 --RLLDAPSLENVHSKSVSCGARHTAVIADDGKVF 428
              L++   L   +  SV+ GA H   +     +F
Sbjct: 401 VKFLMEDDRLGPHNVLSVAVGASHAMCLVSSLCLF 435



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 109/241 (45%), Gaps = 20/241 (8%)

Query: 241 QVWGWGYGGEGQLGLG-SRIRMVSSPHPIPCIESSYGK-DRSAALSRGSVNSEGPGFRVP 298
           Q+  WG G  GQLG G   +R+  SP     +  S+        L   SV +        
Sbjct: 36  QLLSWGRGASGQLGGGIEEMRLYPSPVATLHLPPSFNLCPIPGRLCLPSVENAS------ 89

Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
           G    GI+CG  HS+++ D G L  +G G  G+ G G       P    +L    I   A
Sbjct: 90  GLTEVGISCGLFHSSLVVD-GKLWIWGKGDGGRLGFGQEYPAFLPTLNPNL--DSIRSTA 146

Query: 359 AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
            G  H++ +SS G V+ +G   FG LG      E LPR+++     N   + ++    HT
Sbjct: 147 LGGVHSVALSSLGQVFTWGYGGFGALGHSVYHRELLPRMVEGS--WNAKIRHIATAGTHT 204

Query: 419 AVIADDGKVFCWGWNK-YGQLGLGDVIDRN------IPSQVTIEGCVPRNVACGWWHTLL 471
           A I + G+++ WG ++  G+LGLG     N      IPS+V         V+CG + T++
Sbjct: 205 AAITESGELYTWGRDQGDGRLGLGPNCGPNEGGGLSIPSKVKALPVPVAAVSCGGFFTMV 264

Query: 472 L 472
           L
Sbjct: 265 L 265



 Score = 40.0 bits (92), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 10/94 (10%)

Query: 35  VVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWG--STDDLGQSYVTSGKHGEIPEPF 92
           V  LP+ V +     CGG   F M ++   +L  WG  S  +LG+     G     P+P 
Sbjct: 245 VKALPVPVAAV---SCGGF--FTMVLTQEGQLWNWGANSNYELGRGDKVGGWK---PQPI 296

Query: 93  PLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKE 126
           P   +  I++ A+G  H +A+T+ G+V +WG+ +
Sbjct: 297 PSLQDVRIIQIASGGYHSLALTDDGKVLSWGYGQ 330


>gi|440800739|gb|ELR21774.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 292

 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 124/272 (45%), Gaps = 37/272 (13%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
           G+EN    P  + +    ++  V+ G  H+   ++   V  WG G  G+LG G  I   S
Sbjct: 51  GNENCCNIPKRINIKK--KVVGVSCGDEHSAVFTEANTVLTWGNGTGGRLGTGDEI---S 105

Query: 264 SPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLT 323
              P+                            +P + V  I+CG   +AV+T AG + T
Sbjct: 106 RTQPV----------------------------LPEHKVAQISCGSDWTAVLTLAGKVFT 137

Query: 324 FGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQ 383
           FG G YG+ G G+  ++L P  V  L   ++  ++ G  H   ++ +GDV+ +G    G+
Sbjct: 138 FGVGSYGKLGHGNDSNQLVPKLVEELDTERVVSLSCGADHMAALNIEGDVFTWGCGGNGR 197

Query: 384 LGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDV 443
           LG G ++    P L+    +  + + +V CG  H  V   DG+++ WGWN YGQ GLG  
Sbjct: 198 LGHGSERDSKKPVLVKG--MNGLVALTVECGGYHMGVTTLDGELYMWGWNVYGQCGLGLH 255

Query: 444 IDRNIPSQVT--IEGCVPRNVACGWWHTLLLA 473
           ++  +   +   + G     VACG  HT+ L 
Sbjct: 256 VENQLTPVLVEQLRGKRVLMVACGESHTMALV 287



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 79/235 (33%), Positives = 111/235 (47%), Gaps = 13/235 (5%)

Query: 241 QVWGWGYGGEGQLGL-----GSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF 295
            V+ WG G  GQLG      GS  R VS+    P +  + G   S  L  G+ N      
Sbjct: 1   MVFSWGLGNGGQLGHHDEENGSFPREVSALRKKPSVIIAVGNGESGRLGLGNENCCNIPK 60

Query: 296 RVP-GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQI 354
           R+     V G++CG  HSAV T+A  +LT+G G  G+ G G       P     L   ++
Sbjct: 61  RINIKKKVVGVSCGDEHSAVFTEANTVLTWGNGTGGRLGTGDEISRTQP----VLPEHKV 116

Query: 355 EGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
             ++ G   T  ++  G V+ FG   +G+LG G D  + +P+L++    E V   S+SCG
Sbjct: 117 AQISCGSDWTAVLTLAGKVFTFGVGSYGKLGHGNDSNQLVPKLVEELDTERV--VSLSCG 174

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWH 468
           A H A +  +G VF WG    G+LG G   D   P  V  + G V   V CG +H
Sbjct: 175 ADHMAALNIEGDVFTWGCGGNGRLGHGSERDSKKPVLVKGMNGLVALTVECGGYH 229



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 73/281 (25%), Positives = 113/281 (40%), Gaps = 51/281 (18%)

Query: 91  PFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFER 150
           P  +  +  +V  + G  H    TE   V TWG           G L TG  + +     
Sbjct: 59  PKRINIKKKVVGVSCGDEHSAVFTEANTVLTWG-------NGTGGRLGTGDEISR----- 106

Query: 151 QSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSA 210
                T+ V P  +V++ S G+        +G      +  +    +      G+++   
Sbjct: 107 -----TQPVLPEHKVAQISCGSDWTAVLTLAG------KVFTFGVGSYGKLGHGNDSNQL 155

Query: 211 FPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPC 270
            P LV      R+ +++ G  H  AL+  G V+ WG GG G+LG GS      S  P+  
Sbjct: 156 VPKLVEELDTERVVSLSCGADHMAALNIEGDVFTWGCGGNGRLGHGSE---RDSKKPVLV 212

Query: 271 IESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
                G +   AL+                    + CGG H  V T  G L  +GW +YG
Sbjct: 213 ----KGMNGLVALT--------------------VECGGYHMGVTTLDGELYMWGWNVYG 248

Query: 331 QCGQG-STDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
           QCG G   +++L+P  V  L G ++  VA G  HT+ + S+
Sbjct: 249 QCGLGLHVENQLTPVLVEQLRGKRVLMVACGESHTMALVSN 289


>gi|73952408|ref|XP_536160.2| PREDICTED: E3 ubiquitin-protein ligase HERC2 isoform 1 [Canis lupus
           familiaris]
          Length = 4837

 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 129/255 (50%), Gaps = 29/255 (11%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           V+IA   + G H LAL+  G+V+ WG G  G+LG G  +     P   P + S++   ++
Sbjct: 497 VKIAA-HSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 550

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                             G +V  IACG  +SA IT  G L T+G G YG+ G GS++DE
Sbjct: 551 ------------------GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 592

Query: 341 LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
             P  V+ L G+++  VA  +G   T+ ++ +G V+++G   +G+LG GG      P+L+
Sbjct: 593 AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLI 652

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGC 457
           +   L+++    V CG++ +  +  DG+V+ WG     +LG G       P  +  ++G 
Sbjct: 653 E--KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGK 710

Query: 458 VPRNVACGWWHTLLL 472
              +VA G  H L L
Sbjct: 711 KVIDVAAGSTHCLAL 725



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 128/303 (42%), Gaps = 80/303 (26%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GGRH  AL+  G+V+ WG G +G+LG  SR+     P  I  +++   +D  
Sbjct: 3048 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRD-- 3104

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                    IACG  HSA +T +G L T+G G YG+ G G    +
Sbjct: 3105 ------------------------IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ 3140

Query: 341  LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V  LLG ++  VA G     T+ ++ +G V+++G   FG+LG GG +   +P+ +
Sbjct: 3141 LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNI 3200

Query: 399  DAPSLE------------------------------------NVHSKS------------ 410
            +  + +                                    +VH +             
Sbjct: 3201 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI 3260

Query: 411  --VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWW 467
              V+ GA H   + D G+V+ WG N +GQ G G       P+ V  +EG     VACG  
Sbjct: 3261 VHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3320

Query: 468  HTL 470
            H++
Sbjct: 3321 HSV 3323



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 144/365 (39%), Gaps = 82/365 (22%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V   +G  HC+A++  GEVY+WG  E         D   G G ++   +R    + E + 
Sbjct: 4045 VAVNSGGKHCLALSSEGEVYSWGEAE---------DGKLGHG-NRSPCDRPR--VIESLR 4092

Query: 161  PRSQVSRSSGGTSSG-TDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
                V  ++GG  S      G      K R   L    +E            P LV    
Sbjct: 4093 GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLK--------PKLVEALQ 4144

Query: 220  GVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
            G R+  VA  +G   TL L+D   VW WG G  G+LG G                   G 
Sbjct: 4145 GHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-------------------GS 4185

Query: 278  DRSAALSRGSVNSEGPGFRVPGNY-------VKGIACGGRHSAVITDAGALLTFGWGLYG 330
            D               G +VP          V  + CG + S  +T +GA+ T+G G Y 
Sbjct: 4186 D---------------GCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4230

Query: 331  QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            + G GS D    P  V  L G ++  +A G  H +C + DG+VY +G N  GQLG G   
Sbjct: 4231 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTN 4290

Query: 391  AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
            A   PRL+ A  L+      V+CG+ HT           W  +K    G        +P+
Sbjct: 4291 AIQRPRLVAA--LQGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPA 4332

Query: 451  QVTIE 455
            QV +E
Sbjct: 4333 QVPME 4337



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 112/400 (28%), Positives = 165/400 (41%), Gaps = 60/400 (15%)

Query: 53   GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
              G   A +   K+  WG  +D  Q     G   ++P      +  ++V+ A G     A
Sbjct: 2949 AAGLESAATIRTKVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 3007

Query: 113  VTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG- 171
            VT  G+VY  G      +GR+   LS+GT        RQ + L+  V  +  V+  SGG 
Sbjct: 3008 VTVEGKVYACGE---ATNGRLGLGLSSGTV----PIPRQITALSSYVVKK--VAVHSGGR 3058

Query: 172  --TSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIAT 225
              T+   DG+    G G++G         K    S  + D+     P L+      RI  
Sbjct: 3059 HATALTVDGKVFSWGEGDDG---------KLGHFSRMNCDK-----PRLIEALKTKRIRD 3104

Query: 226  VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS-----RIRMVSSPHPIPCIESSYGKDRS 280
            +A G  H+ AL+  G+++ WG G  G+LG G      + +MV        I+ + G   +
Sbjct: 3105 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3164

Query: 281  AALS---RGSVNSEGPG-------------------FRVPGNYVKGIACGGRHSAVITDA 318
              L+    G V S G G                    R+ G  V  I CG + S  +T +
Sbjct: 3165 QTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3224

Query: 319  GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            G + T+G G Y + G GS      P  V  L G +I  VA G  H + ++  G VYA+G 
Sbjct: 3225 GVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGD 3284

Query: 379  NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
            N  GQ G G       P L+    LE      V+CG+ H+
Sbjct: 3285 NDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHS 3322



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 124/270 (45%), Gaps = 46/270 (17%)

Query: 233  TLALSDIGQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAALSRG---- 286
            TL+    G ++GWG+   GQLG   G+++++     P PC   +    R   L  G    
Sbjct: 3948 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKV-----PTPC--EALATLRPVQLIGGEQTL 4000

Query: 287  -SVNSEGPGF-------------------------RVPGNYVKGIAC--GGRHSAVITDA 318
             +V ++G  +                          +   ++K +A   GG+H   ++  
Sbjct: 4001 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4060

Query: 319  GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            G + ++G    G+ G G+      P  + SL GI++  VAAG  H+ C+++ GD+Y +G 
Sbjct: 4061 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGK 4120

Query: 379  NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGA--RHTAVIADDGKVFCWGWNKYG 436
             ++G+LG    + +  P+L++A  L+      V+CG+    T  + DD  V+ WG   YG
Sbjct: 4121 GRYGRLGHSDSEDQLKPKLVEA--LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYG 4178

Query: 437  QLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
            +LG G      +P ++ ++ G     V CG
Sbjct: 4179 KLGRGGSDGCKVPMKIDSLTGLGVVKVECG 4208



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 92/217 (42%), Gaps = 38/217 (17%)

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
           SS DE   A P LV    G+++  VA  +G   TLA+++ GQVW WG G  G+LG G   
Sbjct: 588 SSEDE---AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG--- 641

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITD 317
                                     GS   + P    ++    V  + CG + S  +T 
Sbjct: 642 --------------------------GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTK 675

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
            G + ++G G   + G G+ +    P  +  L G ++  VAAG  H + ++ D +V+++G
Sbjct: 676 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
            N   Q         T P     P L+  H   ++CG
Sbjct: 736 SND--QCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 770



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 83/310 (26%), Positives = 121/310 (39%), Gaps = 47/310 (15%)

Query: 57   AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEG 116
            A A++   K+ +WG  DD G+    S  + + P          I   A G +H  A+T  
Sbjct: 3060 ATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 3118

Query: 117  GEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGT 176
            GE+YTWG  E    GR  G     T L   + +        QV+  S+ +++   T  G 
Sbjct: 3119 GELYTWGLGE---YGR-LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174

Query: 177  DGR-GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLA 235
                G G+ G   R              G E  +    +  LN G  +  +  G + +LA
Sbjct: 3175 VFSWGDGDFGKLGR-------------GGSEGCNIPQNIERLN-GQGVCQIECGAQFSLA 3220

Query: 236  LSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF 295
            L+  G VW WG G   +LG GS +  V  P  +                         G 
Sbjct: 3221 LTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQVVE------------------------GL 3255

Query: 296  RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
            R  G  +  +A G  H   +TDAG +  +G   +GQ G G+T     P  V  L G +I 
Sbjct: 3256 R--GKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKIT 3313

Query: 356  GVAAGLWHTI 365
             VA G  H++
Sbjct: 3314 RVACGSSHSV 3323



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 120/276 (43%), Gaps = 48/276 (17%)

Query: 205  DENLSAFPCLVTLNP---------GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG- 254
            +E+L+A P L + N          G  I   AAG      +    +V+ WG   + QLG 
Sbjct: 2918 EEDLAAVPFLASDNEEEEDEKGNSGSLIRKKAAGLESAATIR--TKVFVWGLNDKDQLGG 2975

Query: 255  -LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSA 313
              GS+I++            S+ +  SA                  N V+ +A G +   
Sbjct: 2976 LKGSKIKV-----------PSFSETLSAL-----------------NVVQ-VAGGSKSLF 3006

Query: 314  VITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVA--AGLWHTICISSD 370
             +T  G +   G    G+ G G +   +  P  +++L    ++ VA  +G  H   ++ D
Sbjct: 3007 AVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVD 3066

Query: 371  GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
            G V+++G    G+LG         PRL++A  L+    + ++CG+ H+A +   G+++ W
Sbjct: 3067 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEA--LKTKRIRDIACGSSHSAALTSSGELYTW 3124

Query: 431  GWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACG 465
            G  +YG+LG GD   +  P  V +  G     VACG
Sbjct: 3125 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3160



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 5/73 (6%)

Query: 53   GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
            G  F++A++ S  + TWG  D   LG     S  H   P          ++  A G  HC
Sbjct: 4208 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRRPRQVQGLQGKKVIAIATGSLHC 4264

Query: 111  VAVTEGGEVYTWG 123
            V  TE GEVYTWG
Sbjct: 4265 VCCTEDGEVYTWG 4277


>gi|380787033|gb|AFE65392.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
          Length = 4834

 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 129/255 (50%), Gaps = 29/255 (11%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           V+IA   + G H LAL+  G+V+ WG G  G+LG G  +     P   P + S++   ++
Sbjct: 496 VKIAA-HSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 549

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                             G +V  IACG  +SA IT  G L T+G G YG+ G GS++DE
Sbjct: 550 ------------------GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 591

Query: 341 LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
             P  V+ L G+++  VA  +G   T+ ++ +G V+++G   +G+LG GG      P+L+
Sbjct: 592 AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLI 651

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGC 457
           +   L+++    V CG++ +  +  DG+V+ WG     +LG G       P  +  ++G 
Sbjct: 652 E--KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGK 709

Query: 458 VPRNVACGWWHTLLL 472
              +VA G  H L L
Sbjct: 710 KVIDVAAGSTHCLAL 724



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 128/303 (42%), Gaps = 80/303 (26%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GGRH  AL+  G+V+ WG G +G+LG  SR+     P  I  +++   +D  
Sbjct: 3047 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRD-- 3103

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                    IACG  HSA +T +G L T+G G YG+ G G    +
Sbjct: 3104 ------------------------IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ 3139

Query: 341  LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V  LLG ++  VA G     T+ ++ +G V+++G   FG+LG GG +   +P+ +
Sbjct: 3140 LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNI 3199

Query: 399  DAPSLE------------------------------------NVHSKS------------ 410
            +  + +                                    +VH +             
Sbjct: 3200 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI 3259

Query: 411  --VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWW 467
              V+ GA H   + D G+V+ WG N +GQ G G       P+ V  +EG     VACG  
Sbjct: 3260 VHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3319

Query: 468  HTL 470
            H++
Sbjct: 3320 HSV 3322



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 144/365 (39%), Gaps = 82/365 (22%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V   +G  HC+A++  GEVY+WG  E         D   G G ++   +R    + E + 
Sbjct: 4042 VAVNSGGKHCLALSSEGEVYSWGEAE---------DGKLGHG-NRSPCDRPR--VIESLR 4089

Query: 161  PRSQVSRSSGGTSSG-TDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
                V  ++GG  S      G      K R   L    +E            P LV    
Sbjct: 4090 GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLK--------PKLVEALQ 4141

Query: 220  GVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
            G R+  +A  +G   TL L+D   VW WG G  G+LG G                   G 
Sbjct: 4142 GHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-------------------GS 4182

Query: 278  DRSAALSRGSVNSEGPGFRVPGNY-------VKGIACGGRHSAVITDAGALLTFGWGLYG 330
            D               G +VP          V  + CG + S  +T +GA+ T+G G Y 
Sbjct: 4183 D---------------GCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4227

Query: 331  QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            + G GS D    P  V  L G ++  +A G  H +C + DG+VY +G N  GQLG G   
Sbjct: 4228 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTN 4287

Query: 391  AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
            A   PRL+ A  L+      V+CG+ HT           W  +K    G        +P+
Sbjct: 4288 AIQRPRLVAA--LQGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPA 4329

Query: 451  QVTIE 455
            QV +E
Sbjct: 4330 QVPME 4334



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 165/400 (41%), Gaps = 60/400 (15%)

Query: 53   GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
              G   A +   K+  WG  +D  Q     G   ++P      +  ++V+ A G     A
Sbjct: 2948 AAGLESAATIRTKVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 3006

Query: 113  VTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG- 171
            VT  G+VY  G      +GR+   +S+GT        RQ + L+  V  +  V+  SGG 
Sbjct: 3007 VTVEGKVYACGE---ATNGRLGLGISSGTV----PIPRQITALSSYVVKK--VAVHSGGR 3057

Query: 172  --TSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIAT 225
              T+   DG+    G G++G         K    S  + D+     P L+      RI  
Sbjct: 3058 HATALTVDGKVFSWGEGDDG---------KLGHFSRMNCDK-----PRLIEALKTKRIRD 3103

Query: 226  VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS-----RIRMVSSPHPIPCIESSYGKDRS 280
            +A G  H+ AL+  G+++ WG G  G+LG G      + +MV        I+ + G   +
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3163

Query: 281  AALS---RGSVNSEGPG-------------------FRVPGNYVKGIACGGRHSAVITDA 318
              L+    G V S G G                    R+ G  V  I CG + S  +T +
Sbjct: 3164 QTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3223

Query: 319  GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            G + T+G G Y + G GS      P  V  L G +I  VA G  H + ++  G VYA+G 
Sbjct: 3224 GVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGD 3283

Query: 379  NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
            N  GQ G G       P L+    LE      V+CG+ H+
Sbjct: 3284 NDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHS 3321



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 120/268 (44%), Gaps = 42/268 (15%)

Query: 233  TLALSDIGQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAALSRG---- 286
            TL+    G ++GWG+   GQLG   G+++++     P PC   +    R   L  G    
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKV-----PTPC--EALATLRPVQLIGGEQTL 3997

Query: 287  -SVNSEGPGF-------------------------RVPGNYVKGIAC--GGRHSAVITDA 318
             +V ++G  +                          +   ++K +A   GG+H   ++  
Sbjct: 3998 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4057

Query: 319  GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            G + ++G    G+ G G+      P  + SL GI++  VAAG  H+ C+++ GD+Y +G 
Sbjct: 4058 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGK 4117

Query: 379  NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
             ++G+LG    + +  P+L++A     V   +   G   T  + DD  V+ WG   YG+L
Sbjct: 4118 GRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKL 4177

Query: 439  GLGDVIDRNIPSQV-TIEGCVPRNVACG 465
            G G      +P ++ ++ G     V CG
Sbjct: 4178 GRGGSDGCKVPMKIDSLTGLGVVKVECG 4205



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 92/217 (42%), Gaps = 38/217 (17%)

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
           SS DE   A P LV    G+++  VA  +G   TLA+++ GQVW WG G  G+LG G   
Sbjct: 587 SSEDE---AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG--- 640

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITD 317
                                     GS   + P    ++    V  + CG + S  +T 
Sbjct: 641 --------------------------GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTK 674

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
            G + ++G G   + G G+ +    P  +  L G ++  VAAG  H + ++ D +V+++G
Sbjct: 675 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
            N   Q         T P     P L+  H   ++CG
Sbjct: 735 SND--QCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 120/276 (43%), Gaps = 48/276 (17%)

Query: 205  DENLSAFPCLVTLNP---------GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG- 254
            +E+L+A P L + N          G  I   AAG      +    +V+ WG   + QLG 
Sbjct: 2917 EEDLAAVPFLASDNEEEEDEKGNSGSLIRKKAAGLESAATIR--TKVFVWGLNDKDQLGG 2974

Query: 255  -LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSA 313
              GS+I++            S+ +  SA                  N V+ +A G +   
Sbjct: 2975 LKGSKIKV-----------PSFSETLSAL-----------------NVVQ-VAGGSKSLF 3005

Query: 314  VITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVA--AGLWHTICISSD 370
             +T  G +   G    G+ G G +   +  P  +++L    ++ VA  +G  H   ++ D
Sbjct: 3006 AVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVD 3065

Query: 371  GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
            G V+++G    G+LG         PRL++A  L+    + ++CG+ H+A +   G+++ W
Sbjct: 3066 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEA--LKTKRIRDIACGSSHSAALTSSGELYTW 3123

Query: 431  GWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACG 465
            G  +YG+LG GD   +  P  V +  G     VACG
Sbjct: 3124 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3159



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 82/310 (26%), Positives = 121/310 (39%), Gaps = 47/310 (15%)

Query: 57   AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEG 116
            A A++   K+ +WG  DD G+    S  + + P          I   A G +H  A+T  
Sbjct: 3059 ATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 3117

Query: 117  GEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGT 176
            GE+YTWG  E    GR  G     T L   + +        QV+  S+ +++   T  G 
Sbjct: 3118 GELYTWGLGE---YGR-LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173

Query: 177  DGR-GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLA 235
                G G+ G   R              G E  +    +  LN G  +  +  G + +LA
Sbjct: 3174 VFSWGDGDFGKLGR-------------GGSEGCNIPQNIERLN-GQGVCQIECGAQFSLA 3219

Query: 236  LSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF 295
            L+  G VW WG G   +LG GS +  V  P  +                         G 
Sbjct: 3220 LTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQVVE------------------------GL 3254

Query: 296  RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
            R  G  +  +A G  H   +TD+G +  +G   +GQ G G+T     P  V  L G +I 
Sbjct: 3255 R--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKIT 3312

Query: 356  GVAAGLWHTI 365
             VA G  H++
Sbjct: 3313 RVACGSSHSV 3322



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 5/73 (6%)

Query: 53   GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
            G  F++A++ S  + TWG  D   LG     S  H   P          ++  A G  HC
Sbjct: 4205 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRRPRQVQGLQGKKVIAIATGSLHC 4261

Query: 111  VAVTEGGEVYTWG 123
            V  TE GEVYTWG
Sbjct: 4262 VCCTEDGEVYTWG 4274


>gi|297296008|ref|XP_001109429.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Macaca
           mulatta]
          Length = 4840

 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 129/255 (50%), Gaps = 29/255 (11%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           V+IA   + G H LAL+  G+V+ WG G  G+LG G  +     P   P + S++   ++
Sbjct: 496 VKIAA-HSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 549

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                             G +V  IACG  +SA IT  G L T+G G YG+ G GS++DE
Sbjct: 550 ------------------GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 591

Query: 341 LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
             P  V+ L G+++  VA  +G   T+ ++ +G V+++G   +G+LG GG      P+L+
Sbjct: 592 AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLI 651

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGC 457
           +   L+++    V CG++ +  +  DG+V+ WG     +LG G       P  +  ++G 
Sbjct: 652 E--KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGK 709

Query: 458 VPRNVACGWWHTLLL 472
              +VA G  H L L
Sbjct: 710 KVIDVAAGSTHCLAL 724



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 128/303 (42%), Gaps = 80/303 (26%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GGRH  AL+  G+V+ WG G +G+LG  SR+     P  I  +++   +D  
Sbjct: 3047 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRD-- 3103

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                    IACG  HSA +T +G L T+G G YG+ G G    +
Sbjct: 3104 ------------------------IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ 3139

Query: 341  LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V  LLG ++  VA G     T+ ++ +G V+++G   FG+LG GG +   +P+ +
Sbjct: 3140 LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNI 3199

Query: 399  DAPSLE------------------------------------NVHSKS------------ 410
            +  + +                                    +VH +             
Sbjct: 3200 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI 3259

Query: 411  --VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWW 467
              V+ GA H   + D G+V+ WG N +GQ G G       P+ V  +EG     VACG  
Sbjct: 3260 VHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3319

Query: 468  HTL 470
            H++
Sbjct: 3320 HSV 3322



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 144/365 (39%), Gaps = 82/365 (22%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V   +G  HC+A++  GEVY+WG  E         D   G G ++   +R    + E + 
Sbjct: 4073 VAVNSGGKHCLALSSEGEVYSWGEAE---------DGKLGHG-NRSPCDRPR--VIESLR 4120

Query: 161  PRSQVSRSSGGTSSG-TDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
                V  ++GG  S      G      K R   L    +E            P LV    
Sbjct: 4121 GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLK--------PKLVEALQ 4172

Query: 220  GVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
            G R+  +A  +G   TL L+D   VW WG G  G+LG G                   G 
Sbjct: 4173 GHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-------------------GS 4213

Query: 278  DRSAALSRGSVNSEGPGFRVPGNY-------VKGIACGGRHSAVITDAGALLTFGWGLYG 330
            D               G +VP          V  + CG + S  +T +GA+ T+G G Y 
Sbjct: 4214 D---------------GCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4258

Query: 331  QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            + G GS D    P  V  L G ++  +A G  H +C + DG+VY +G N  GQLG G   
Sbjct: 4259 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTN 4318

Query: 391  AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
            A   PRL+ A  L+      V+CG+ HT           W  +K    G        +P+
Sbjct: 4319 AIQRPRLVAA--LQGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPA 4360

Query: 451  QVTIE 455
            QV +E
Sbjct: 4361 QVPME 4365



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 111/398 (27%), Positives = 165/398 (41%), Gaps = 60/398 (15%)

Query: 55   GFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVT 114
            G   A +   K+  WG  +D  Q     G   ++P      +  ++V+ A G     AVT
Sbjct: 2950 GLESAATIRTKVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT 3008

Query: 115  EGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG--- 171
              G+VY  G      +GR+   +S+GT        RQ + L+  V  +  V+  SGG   
Sbjct: 3009 VEGKVYACGE---ATNGRLGLGISSGTV----PIPRQITALSSYVVKK--VAVHSGGRHA 3059

Query: 172  TSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVA 227
            T+   DG+    G G++G         K    S  + D+     P L+      RI  +A
Sbjct: 3060 TALTVDGKVFSWGEGDDG---------KLGHFSRMNCDK-----PRLIEALKTKRIRDIA 3105

Query: 228  AGGRHTLALSDIGQVWGWGYGGEGQLGLGS-----RIRMVSSPHPIPCIESSYGKDRSAA 282
             G  H+ AL+  G+++ WG G  G+LG G      + +MV        I+ + G   +  
Sbjct: 3106 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 3165

Query: 283  LS---RGSVNSEGPG-------------------FRVPGNYVKGIACGGRHSAVITDAGA 320
            L+    G V S G G                    R+ G  V  I CG + S  +T +G 
Sbjct: 3166 LALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGV 3225

Query: 321  LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
            + T+G G Y + G GS      P  V  L G +I  VA G  H + ++  G VYA+G N 
Sbjct: 3226 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDND 3285

Query: 381  FGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
             GQ G G       P L+    LE      V+CG+ H+
Sbjct: 3286 HGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHS 3321



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 120/268 (44%), Gaps = 42/268 (15%)

Query: 233  TLALSDIGQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAALSRG---- 286
            TL+    G ++GWG+   GQLG   G+++++     P PC   +    R   L  G    
Sbjct: 3976 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKV-----PTPC--EALATLRPVQLIGGEQTL 4028

Query: 287  -SVNSEGPGF-------------------------RVPGNYVKGIAC--GGRHSAVITDA 318
             +V ++G  +                          +   ++K +A   GG+H   ++  
Sbjct: 4029 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4088

Query: 319  GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            G + ++G    G+ G G+      P  + SL GI++  VAAG  H+ C+++ GD+Y +G 
Sbjct: 4089 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGK 4148

Query: 379  NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
             ++G+LG    + +  P+L++A     V   +   G   T  + DD  V+ WG   YG+L
Sbjct: 4149 GRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKL 4208

Query: 439  GLGDVIDRNIPSQV-TIEGCVPRNVACG 465
            G G      +P ++ ++ G     V CG
Sbjct: 4209 GRGGSDGCKVPMKIDSLTGLGVVKVECG 4236



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 92/217 (42%), Gaps = 38/217 (17%)

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
           SS DE   A P LV    G+++  VA  +G   TLA+++ GQVW WG G  G+LG G   
Sbjct: 587 SSEDE---AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG--- 640

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITD 317
                                     GS   + P    ++    V  + CG + S  +T 
Sbjct: 641 --------------------------GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTK 674

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
            G + ++G G   + G G+ +    P  +  L G ++  VAAG  H + ++ D +V+++G
Sbjct: 675 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
            N   Q         T P     P L+  H   ++CG
Sbjct: 735 SND--QCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 120/276 (43%), Gaps = 48/276 (17%)

Query: 205  DENLSAFPCLVTLNP---------GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG- 254
            +E+L+A P L + N          G  I   AAG      +    +V+ WG   + QLG 
Sbjct: 2917 EEDLAAVPFLASDNEEEEDEKGNSGSLIRKKAAGLESAATIR--TKVFVWGLNDKDQLGG 2974

Query: 255  -LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSA 313
              GS+I++            S+ +  SA                  N V+ +A G +   
Sbjct: 2975 LKGSKIKV-----------PSFSETLSAL-----------------NVVQ-VAGGSKSLF 3005

Query: 314  VITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVA--AGLWHTICISSD 370
             +T  G +   G    G+ G G +   +  P  +++L    ++ VA  +G  H   ++ D
Sbjct: 3006 AVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVD 3065

Query: 371  GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
            G V+++G    G+LG         PRL++A  L+    + ++CG+ H+A +   G+++ W
Sbjct: 3066 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEA--LKTKRIRDIACGSSHSAALTSSGELYTW 3123

Query: 431  GWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACG 465
            G  +YG+LG GD   +  P  V +  G     VACG
Sbjct: 3124 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3159



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 82/310 (26%), Positives = 121/310 (39%), Gaps = 47/310 (15%)

Query: 57   AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEG 116
            A A++   K+ +WG  DD G+    S  + + P          I   A G +H  A+T  
Sbjct: 3059 ATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 3117

Query: 117  GEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGT 176
            GE+YTWG  E    GR  G     T L   + +        QV+  S+ +++   T  G 
Sbjct: 3118 GELYTWGLGE---YGR-LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173

Query: 177  DGR-GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLA 235
                G G+ G   R              G E  +    +  LN G  +  +  G + +LA
Sbjct: 3174 VFSWGDGDFGKLGR-------------GGSEGCNIPQNIERLN-GQGVCQIECGAQFSLA 3219

Query: 236  LSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF 295
            L+  G VW WG G   +LG GS +  V  P  +                         G 
Sbjct: 3220 LTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQVVE------------------------GL 3254

Query: 296  RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
            R  G  +  +A G  H   +TD+G +  +G   +GQ G G+T     P  V  L G +I 
Sbjct: 3255 R--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKIT 3312

Query: 356  GVAAGLWHTI 365
             VA G  H++
Sbjct: 3313 RVACGSSHSV 3322



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 5/73 (6%)

Query: 53   GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
            G  F++A++ S  + TWG  D   LG     S  H   P          ++  A G  HC
Sbjct: 4236 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRRPRQVQGLQGKKVIAIATGSLHC 4292

Query: 111  VAVTEGGEVYTWG 123
            V  TE GEVYTWG
Sbjct: 4293 VCCTEDGEVYTWG 4305


>gi|134288898|ref|NP_034548.2| E3 ubiquitin-protein ligase HERC2 [Mus musculus]
 gi|341941077|sp|Q4U2R1.3|HERC2_MOUSE RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
           domain and RCC1-like domain-containing protein 2
          Length = 4836

 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 86/292 (29%), Positives = 145/292 (49%), Gaps = 31/292 (10%)

Query: 186 SKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAA--GGRHTLALSDIGQVW 243
           +++R + L++     + + + ++ A P LV       I  +AA   G H LAL+  G+V+
Sbjct: 460 AEKRFLILSRNGRVYTQAYNSDMLA-PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY 518

Query: 244 GWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVK 303
            WG G  G+LG G  +     P   P + S++   ++                  G +V 
Sbjct: 519 SWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA------------------GKHVV 555

Query: 304 GIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA--AGL 361
            IACG  +SA IT  G L T+G G YG+ G GS++DE  P  V+ L G+++  VA  +G 
Sbjct: 556 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGD 615

Query: 362 WHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
             T+ ++ +G V+++G   +G+LG GG      P+L++   L+++    V CG++ +  +
Sbjct: 616 AQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE--KLQDLDVIKVRCGSQFSIAL 673

Query: 422 ADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
             DG+V+ WG     +LG G       P  +  ++G    +VA G  H L L
Sbjct: 674 TKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 725



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 128/303 (42%), Gaps = 80/303 (26%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GGRH  AL+  G+V+ WG G +G+LG  SR+     P  I  +++   +D  
Sbjct: 3048 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRD-- 3104

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                    IACG  HSA +T +G L T+G G YG+ G G    +
Sbjct: 3105 ------------------------IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ 3140

Query: 341  LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V  LLG ++  VA G     T+ ++ +G V+++G   FG+LG GG +   +P+ +
Sbjct: 3141 LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNI 3200

Query: 399  DAPSLE------------------------------------NVHSKS------------ 410
            +  + +                                    +VH +             
Sbjct: 3201 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI 3260

Query: 411  --VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWW 467
              V+ GA H   + D G+V+ WG N +GQ G G       P+ V  +EG     VACG  
Sbjct: 3261 VHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3320

Query: 468  HTL 470
            H++
Sbjct: 3321 HSV 3323



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 144/365 (39%), Gaps = 82/365 (22%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V   +G  HC+A++  GEVY+WG  E         D   G G ++   +R    + E + 
Sbjct: 4044 VAVNSGGKHCLALSSEGEVYSWGEAE---------DGKLGHG-NRSPCDRPR--VIESLR 4091

Query: 161  PRSQVSRSSGGTSSG-TDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
                V  ++GG  S      G      K R   L    +E            P LV    
Sbjct: 4092 GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLK--------PKLVEALQ 4143

Query: 220  GVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
            G R+  +A  +G   TL L+D   VW WG G  G+LG G                   G 
Sbjct: 4144 GHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-------------------GS 4184

Query: 278  DRSAALSRGSVNSEGPGFRVPGNY-------VKGIACGGRHSAVITDAGALLTFGWGLYG 330
            D               G +VP          V  + CG + S  +T +GA+ T+G G Y 
Sbjct: 4185 D---------------GCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4229

Query: 331  QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            + G GS D    P  V  L G ++  +A G  H +C + DG+VY +G N  GQLG G   
Sbjct: 4230 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTN 4289

Query: 391  AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
            A   PRL+ A  L+      V+CG+ HT           W  +K    G        +P+
Sbjct: 4290 AIQRPRLVAA--LQGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPA 4331

Query: 451  QVTIE 455
            QV +E
Sbjct: 4332 QVPME 4336



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 163/389 (41%), Gaps = 60/389 (15%)

Query: 65   KLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGW 124
            K+  WG  +D  Q     G   ++P      +  ++V+ A G     AVT  G+VY+ G 
Sbjct: 2961 KVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGE 3019

Query: 125  KECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG---TSSGTDGR-- 179
                 +GR+   +S+GT        RQ + L+  V  +  V+  SGG   T+   DG+  
Sbjct: 3020 ---ATNGRLGLGMSSGTV----PIPRQITALSSYVVKK--VAVHSGGRHATALTVDGKVF 3070

Query: 180  --GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS 237
              G G++G         K    S  + D+     P L+      RI  +A G  H+ AL+
Sbjct: 3071 SWGEGDDG---------KLGHFSRMNCDK-----PRLIEALKTKRIRDIACGSSHSAALT 3116

Query: 238  DIGQVWGWGYGGEGQLGLGS-----RIRMVSSPHPIPCIESSYGKDRSAALS---RGSVN 289
              G+++ WG G  G+LG G      + +MV        I+ + G   +  L+    G V 
Sbjct: 3117 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 3176

Query: 290  SEGPG-------------------FRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
            S G G                    R+ G  V  I CG + S  +T +G + T+G G Y 
Sbjct: 3177 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 3236

Query: 331  QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            + G GS      P  V  L G +I  VA G  H + ++  G VYA+G N  GQ G G   
Sbjct: 3237 RLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTT 3296

Query: 391  AETLPRLLDAPSLENVHSKSVSCGARHTA 419
                P L+    LE      V+CG+ H+ 
Sbjct: 3297 VNRKPTLVQG--LEGQKITRVACGSSHSV 3323



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/276 (25%), Positives = 123/276 (44%), Gaps = 50/276 (18%)

Query: 225  TVAAGGRHTLALSDIGQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAA 282
            T++AGG         G ++GWG+   GQLG   G+++++     P PC   +    R   
Sbjct: 3947 TLSAGGS--------GTIYGWGHNHRGQLGGIEGAKVKV-----PTPC--EALATLRPVQ 3991

Query: 283  LSRG-----SVNSEGPGF-------------------------RVPGNYVKGIAC--GGR 310
            L  G     +V ++G  +                          +   ++K +A   GG+
Sbjct: 3992 LIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGK 4051

Query: 311  HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
            H   ++  G + ++G    G+ G G+      P  + SL GI++  VAAG  H+ C+++ 
Sbjct: 4052 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAA 4111

Query: 371  GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
            GD+Y +G  ++G+LG    + +  P+L++A     V   +   G   T  + DD  V+ W
Sbjct: 4112 GDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSW 4171

Query: 431  GWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
            G   YG+LG G      +P ++ ++ G     V CG
Sbjct: 4172 GDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECG 4207



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 93/217 (42%), Gaps = 38/217 (17%)

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
           SS DE   A P LV    G+++  VA  +G   TLA+++ GQVW WG G  G+LG G   
Sbjct: 588 SSEDE---AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG--- 641

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITD 317
                                     GS   + P    ++    V  + CG + S  +T 
Sbjct: 642 --------------------------GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTK 675

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
            G + ++G G   + G G+ +    P  +  L G ++  VAAG  H + ++ D +V+++G
Sbjct: 676 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
            N   Q         T P     P L++ H   ++CG
Sbjct: 736 SND--QCQHFDTLRVTKPEPTALPGLDSKHIVGIACG 770



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 83/168 (49%), Gaps = 6/168 (3%)

Query: 302  VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVA-- 358
            V  +A G +    +T  G + + G    G+ G G +   +  P  +++L    ++ VA  
Sbjct: 2995 VVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVH 3054

Query: 359  AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
            +G  H   ++ DG V+++G    G+LG         PRL++A  L+    + ++CG+ H+
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA--LKTKRIRDIACGSSHS 3112

Query: 419  AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACG 465
            A +   G+++ WG  +YG+LG GD   +  P  V +  G     VACG
Sbjct: 3113 AALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3160



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 5/73 (6%)

Query: 53   GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
            G  F++A++ S  + TWG  D   LG     S  H   P          ++  A G  HC
Sbjct: 4207 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRRPRQVQGLQGKKVIAIATGSLHC 4263

Query: 111  VAVTEGGEVYTWG 123
            V  TE GEVYTWG
Sbjct: 4264 VCCTEDGEVYTWG 4276


>gi|145594132|ref|YP_001158429.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
           CNB-440]
 gi|145303469|gb|ABP54051.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
           CNB-440]
          Length = 570

 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 127/420 (30%), Positives = 179/420 (42%), Gaps = 57/420 (13%)

Query: 63  SRKLITWGSTDDLGQ--SYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVY 120
           S   + WG  +  GQ     T+G +  +P   P  T+A+ V   AG  H +A+T  G V 
Sbjct: 56  SDAFLAWGD-NAFGQLGDGTTTGSNTPLPVSLPAGTDATAV--VAGDFHSLALTSAGTVL 112

Query: 121 TWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTD-GR 179
            WG  +   SG+  GD +T +     V           V+  +    S   TS+G     
Sbjct: 113 AWGRND---SGQ-LGDGTTVSSSTPVVVRLPVGVTVTAVA--AGFGHSLALTSTGVVLAW 166

Query: 180 GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDI 239
           GS   G       L   T  SSS+        P  V L  GV +  VAAG  H+LAL+ +
Sbjct: 167 GSNSFGQ------LGDGTTVSSST--------PVAVRLPVGVTVTAVAAGSGHSLALTSV 212

Query: 240 GQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVP- 298
           G    WG    GQLG G+    VSS  P+                           R+P 
Sbjct: 213 GAALAWGNNFSGQLGDGT---TVSSSTPV-------------------------AVRLPV 244

Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
           G  V  +A G  HS  +T AGA L +G    GQ G G+T    +P  VS  +G  +  +A
Sbjct: 245 GTTVTAVAGGSHHSLALTSAGAALAWGGNFSGQLGDGTTVSSSTPVVVSLPVGTTVTALA 304

Query: 359 AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
            G  H++ ++S G   A+G N  GQLG G +   ++P  +  P+   + + +   GA H 
Sbjct: 305 GGDAHSVALTSAGAALAWGSNGDGQLGDGTNADSSVPIAVSLPAGATITAIAAHDGA-HN 363

Query: 419 AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACGWWHTLLLAVPPT 477
             I   G    WG N  GQLG G   D ++P  V++  G     +A    H+L LA PP+
Sbjct: 364 LAITSTGAALAWGGNGDGQLGDGTNADSSVPIAVSLPAGTTITAIAASVEHSLALAAPPS 423



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/162 (34%), Positives = 80/162 (49%), Gaps = 5/162 (3%)

Query: 312 SAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDG 371
           SAV +DA   L +G   +GQ G G+T    +P  VS   G     V AG +H++ ++S G
Sbjct: 52  SAVGSDA--FLAWGDNAFGQLGDGTTTGSNTPLPVSLPAGTDATAVVAGDFHSLALTSAG 109

Query: 372 DVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWG 431
            V A+G N  GQLG G   + + P ++  P    V   +V+ G  H+  +   G V  WG
Sbjct: 110 TVLAWGRNDSGQLGDGTTVSSSTPVVVRLP--VGVTVTAVAAGFGHSLALTSTGVVLAWG 167

Query: 432 WNKYGQLGLGDVIDRNIPSQVTIE-GCVPRNVACGWWHTLLL 472
            N +GQLG G  +  + P  V +  G     VA G  H+L L
Sbjct: 168 SNSFGQLGDGTTVSSSTPVAVRLPVGVTVTAVAAGSGHSLAL 209



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 104/398 (26%), Positives = 148/398 (37%), Gaps = 65/398 (16%)

Query: 32  SPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIP 89
           +PL V LP   G+    V  G    ++A++ +  ++ WG  D   LG     S      P
Sbjct: 80  TPLPVSLP--AGTDATAVVAGDF-HSLALTSAGTVLAWGRNDSGQLGDGTTVSSS---TP 133

Query: 90  EPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFE 149
               LP   ++   AAG+ H +A+T  G V  WG          FG L  GT +      
Sbjct: 134 VVVRLPVGVTVTAVAAGFGHSLALTSTGVVLAWGSNS-------FGQLGDGTTVSS---- 182

Query: 150 RQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRR-ISLAKQTAESSSSGDENL 208
                 +  V+ R  V     G +      GSG   +      +LA     S   GD   
Sbjct: 183 ------STPVAVRLPV-----GVTVTAVAAGSGHSLALTSVGAALAWGNNFSGQLGDGTT 231

Query: 209 --SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLG-SRIRMVSSP 265
             S+ P  V L  G  +  VA G  H+LAL+  G    WG    GQLG G +        
Sbjct: 232 VSSSTPVAVRLPVGTTVTAVAGGSHHSLALTSAGAALAWGGNFSGQLGDGTTVSSSTPVV 291

Query: 266 HPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFG 325
             +P                             G  V  +A G  HS  +T AGA L +G
Sbjct: 292 VSLPV----------------------------GTTVTALAGGDAHSVALTSAGAALAWG 323

Query: 326 WGLYGQCGQGSTDDELSPNCVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQL 384
               GQ G G+  D   P  VS           A    H + I+S G   A+GGN  GQL
Sbjct: 324 SNGDGQLGDGTNADSSVPIAVSLPAGATITAIAAHDGAHNLAITSTGAALAWGGNGDGQL 383

Query: 385 GTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIA 422
           G G +   ++P  +  P+   +   +++    H+  +A
Sbjct: 384 GDGTNADSSVPIAVSLPAGTTI--TAIAASVEHSLALA 419


>gi|395746465|ref|XP_002825266.2| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
           HERC2-like [Pongo abelii]
          Length = 4581

 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 129/255 (50%), Gaps = 29/255 (11%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           V+IA   + G H LAL+  G+V+ WG G  G+LG G  +     P   P + S++   ++
Sbjct: 496 VKIAA-HSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 549

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                             G +V  IACG  +SA IT  G L T+G G YG+ G GS++DE
Sbjct: 550 ------------------GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 591

Query: 341 LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
             P  V+ L G+++  VA  +G   T+ ++ +G V+++G   +G+LG GG      P+L+
Sbjct: 592 AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLI 651

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGC 457
           +   L+++    V CG++ +  +  DG+V+ WG     +LG G       P  +  ++G 
Sbjct: 652 E--KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGK 709

Query: 458 VPRNVACGWWHTLLL 472
              +VA G  H L L
Sbjct: 710 KVIDVAAGSTHCLAL 724



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 144/365 (39%), Gaps = 82/365 (22%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V   +G  HC+A++  GEVY+WG  E         D   G G ++   +R    + E + 
Sbjct: 3789 VAVNSGGKHCLALSSEGEVYSWGEAE---------DGKLGHG-NRSPCDRPR--VIESLR 3836

Query: 161  PRSQVSRSSGGTSSG-TDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
                V  ++GG  S      G      K R   L    +E            P LV    
Sbjct: 3837 GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLK--------PKLVEALQ 3888

Query: 220  GVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
            G R+  +A  +G   TL L+D   VW WG G  G+LG G                   G 
Sbjct: 3889 GHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-------------------GS 3929

Query: 278  DRSAALSRGSVNSEGPGFRVPGNY-------VKGIACGGRHSAVITDAGALLTFGWGLYG 330
            D               G +VP          V  + CG + S  +T +GA+ T+G G Y 
Sbjct: 3930 D---------------GCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 3974

Query: 331  QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            + G GS D    P  V  L G ++  +A G  H +C + DG+VY +G N  GQLG G   
Sbjct: 3975 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTN 4034

Query: 391  AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
            A   PRL+ A  L+      V+CG+ HT           W  +K    G        +P+
Sbjct: 4035 AIQRPRLVAA--LQGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPA 4076

Query: 451  QVTIE 455
            QV +E
Sbjct: 4077 QVPME 4081



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 120/268 (44%), Gaps = 42/268 (15%)

Query: 233  TLALSDIGQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAALSRG---- 286
            TL+    G ++GWG+   GQLG   G+++++     P PC   +    R   L  G    
Sbjct: 3692 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKV-----PTPC--EALATLRPVQLIGGEQTL 3744

Query: 287  -SVNSEGPGF-------------------------RVPGNYVKGIAC--GGRHSAVITDA 318
             +V ++G  +                          +   ++K +A   GG+H   ++  
Sbjct: 3745 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 3804

Query: 319  GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            G + ++G    G+ G G+      P  + SL GI++  VAAG  H+ C+++ GD+Y +G 
Sbjct: 3805 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGK 3864

Query: 379  NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
             ++G+LG    + +  P+L++A     V   +   G   T  + DD  V+ WG   YG+L
Sbjct: 3865 GRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKL 3924

Query: 439  GLGDVIDRNIPSQV-TIEGCVPRNVACG 465
            G G      +P ++ ++ G     V CG
Sbjct: 3925 GRGGSDGCKVPMKIDSLTGLGVVKVECG 3952



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 99/216 (45%), Gaps = 36/216 (16%)

Query: 240  GQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPG 299
            G+V+ WG G +G+LG  SR+     P  I  +++   +D                     
Sbjct: 2819 GKVFSWGEGDDGKLGHFSRM-----PRLIEALKTKRIRD--------------------- 2852

Query: 300  NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAA 359
                 IACG  HSA +T +G L T+G G YG+ G G    +L P  V  LLG ++  VA 
Sbjct: 2853 -----IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 2907

Query: 360  GLW--HTICISSDGDVYAFGGNQFGQLGTGGD-QAETLPRLLDAPSLENVHSKSVSCGAR 416
            G     T+ ++ +G V++ G     ++G G + +   +P+ ++  + + V    + CGA+
Sbjct: 2908 GSRDAQTLALTDEGLVFSLGDGDLWKIGPGPEVKGCNIPQNIERLNGQGVC--QIECGAQ 2965

Query: 417  HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
             +  +   G V+ WG   Y +LG G  +    P  V
Sbjct: 2966 FSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVV 3001



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 106/406 (26%), Positives = 163/406 (40%), Gaps = 72/406 (17%)

Query: 53   GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
              G   A +   K+ +WG  +D  Q      K  ++P      +  ++V+ A G     A
Sbjct: 2699 AAGLESAATIRTKVFSWG-LNDKDQLGGLKNKKIKVPSFSETLSALNVVQVAGGSKSLFA 2757

Query: 113  VTEGGEVYTWG-------WKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQV 165
            VT  G+VY  G       W   + SG V       T L        SS++ ++V+  S  
Sbjct: 2758 VTVEGKVYACGEATKWPAWGLGISSGTVPIPHGXITAL--------SSYVVKKVAVHSGT 2809

Query: 166  SRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGV 221
            S++        DG+    G G++G                     + S  P L+      
Sbjct: 2810 SQTG---FXPVDGKVFSWGEGDDGKL------------------GHFSRMPRLIEALKTK 2848

Query: 222  RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS-----RIRMVSSPHPIPCIESSYG 276
            RI  +A G  H+ AL+  G+++ WG G  G+LG G      + +MV        I+ + G
Sbjct: 2849 RIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 2908

Query: 277  KDRSAALS---RGSVNSEGPG--FRV-PGNYVKG-----------------IACGGRHSA 313
               +  L+    G V S G G  +++ PG  VKG                 I CG + S 
Sbjct: 2909 SRDAQTLALTDEGLVFSLGDGDLWKIGPGPEVKGCNIPQNIERLNGQGVCQIECGAQFSL 2968

Query: 314  VITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA-AGLWHTICISSDGD 372
             +T +G + T+G G Y + G GS      P  V  L G +I   + +G  H + ++  G 
Sbjct: 2969 ALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVACSCSGALHCLAVTDSGQ 3028

Query: 373  VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
            VYA+G N  GQ G G       P L+    LE      V+CG+ H+
Sbjct: 3029 VYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHS 3072



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 92/217 (42%), Gaps = 38/217 (17%)

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
           SS DE   A P LV    G+++  VA  +G   TLA+++ GQVW WG G  G+LG G   
Sbjct: 587 SSEDE---AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG--- 640

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITD 317
                                     GS   + P    ++    V  + CG + S  +T 
Sbjct: 641 --------------------------GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTK 674

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
            G + ++G G   + G G+ +    P  +  L G ++  VAAG  H + ++ D +V+++G
Sbjct: 675 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
            N   Q         T P     P L+  H   ++CG
Sbjct: 735 SND--QCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 83/191 (43%), Gaps = 29/191 (15%)

Query: 204  GDENLSAFPCLVTLNPGVRIATVAAGGR--HTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
            GD      P +V +  G R+  VA G R   TLAL+D G V+  G G   ++G G  ++ 
Sbjct: 2883 GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSLGDGDLWKIGPGPEVKG 2942

Query: 262  VSSPHPIPCI------ESSYGKDRSAALSRGSVN---SEGPGFRV-PGNYV--------- 302
             + P  I  +      +   G   S AL++  V     +G  FR+  G+ V         
Sbjct: 2943 CNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE 3002

Query: 303  -----KGIAC---GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQI 354
                 K +AC   G  H   +TD+G +  +G   +GQ G G+T     P  V  L G +I
Sbjct: 3003 GLRGKKIVACSCSGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKI 3062

Query: 355  EGVAAGLWHTI 365
              VA G  H++
Sbjct: 3063 TRVACGSSHSV 3073



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 5/73 (6%)

Query: 53   GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
            G  F++A++ S  + TWG  D   LG     S  H   P          ++  A G  HC
Sbjct: 3952 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRRPRQVQGLQGKKVIAIATGSLHC 4008

Query: 111  VAVTEGGEVYTWG 123
            V  TE GEVYTWG
Sbjct: 4009 VCCTEDGEVYTWG 4021


>gi|4079809|gb|AAD08657.1| HERC2 [Homo sapiens]
          Length = 4834

 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 129/255 (50%), Gaps = 29/255 (11%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           V+IA   + G H LAL+  G+V+ WG G  G+LG G  +     P   P + S++   ++
Sbjct: 496 VKIAA-HSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 549

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                             G +V  IACG  +SA IT  G L T+G G YG+ G GS++DE
Sbjct: 550 ------------------GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 591

Query: 341 LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
             P  V+ L G+++  VA  +G   T+ ++ +G V+++G   +G+LG GG      P+L+
Sbjct: 592 AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLI 651

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGC 457
           +   L+++    V CG++ +  +  DG+V+ WG     +LG G       P  +  ++G 
Sbjct: 652 E--KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGK 709

Query: 458 VPRNVACGWWHTLLL 472
              +VA G  H L L
Sbjct: 710 KVIDVAAGSTHCLAL 724



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 128/303 (42%), Gaps = 80/303 (26%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GGRH  AL+  G+V+ WG G +G+LG  SR+     P  I  +++   +D  
Sbjct: 3047 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRD-- 3103

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                    IACG  HSA +T +G L T+G G YG+ G G    +
Sbjct: 3104 ------------------------IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ 3139

Query: 341  LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V  LLG ++  VA G     T+ ++ +G V+++G   FG+LG GG +   +P+ +
Sbjct: 3140 LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNI 3199

Query: 399  DAPSLE------------------------------------NVHSKS------------ 410
            +  + +                                    +VH +             
Sbjct: 3200 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI 3259

Query: 411  --VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWW 467
              V+ GA H   + D G+V+ WG N +GQ G G       P+ V  +EG     VACG  
Sbjct: 3260 VHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3319

Query: 468  HTL 470
            H++
Sbjct: 3320 HSV 3322



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 144/365 (39%), Gaps = 82/365 (22%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V   +G  HC+A++  GEVY+WG  E         D   G G ++   +R    + E + 
Sbjct: 4042 VAVNSGGKHCLALSSEGEVYSWGEAE---------DGKLGHG-NRSPCDRPR--VIESLR 4089

Query: 161  PRSQVSRSSGGTSSG-TDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
                V  ++GG  S      G      K R   L    +E            P LV    
Sbjct: 4090 GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLK--------PKLVEALQ 4141

Query: 220  GVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
            G R+  +A  +G   TL L+D   VW WG G  G+LG G                   G 
Sbjct: 4142 GHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-------------------GS 4182

Query: 278  DRSAALSRGSVNSEGPGFRVPGNY-------VKGIACGGRHSAVITDAGALLTFGWGLYG 330
            D               G +VP          V  + CG + S  +T +GA+ T+G G Y 
Sbjct: 4183 D---------------GCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4227

Query: 331  QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            + G GS D    P  V  L G ++  +A G  H +C + DG+VY +G N  GQLG G   
Sbjct: 4228 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTN 4287

Query: 391  AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
            A   PRL+ A  L+      V+CG+ HT           W  +K    G        +P+
Sbjct: 4288 AIQRPRLVAA--LQGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPA 4329

Query: 451  QVTIE 455
            QV +E
Sbjct: 4330 QVPME 4334



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 165/400 (41%), Gaps = 60/400 (15%)

Query: 53   GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
              G   A +   K+  WG  +D  Q     G   ++P      +  ++V+ A G     A
Sbjct: 2948 AAGLESAATIRTKVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 3006

Query: 113  VTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG- 171
            VT  G+VY  G      +GR+   +S+GT        RQ + L+  V  +  V+  SGG 
Sbjct: 3007 VTVEGKVYACGE---ATNGRLGLGISSGTV----PIPRQITALSSYVVKK--VAVHSGGR 3057

Query: 172  --TSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIAT 225
              T+   DG+    G G++G         K    S  + D+     P L+      RI  
Sbjct: 3058 HATALTVDGKVFSWGEGDDG---------KLGHFSRMNCDK-----PRLIEALKTKRIRD 3103

Query: 226  VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS-----RIRMVSSPHPIPCIESSYGKDRS 280
            +A G  H+ AL+  G+++ WG G  G+LG G      + +MV        I+ + G   +
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3163

Query: 281  AALS---RGSVNSEGPG-------------------FRVPGNYVKGIACGGRHSAVITDA 318
              L+    G V S G G                    R+ G  V  I CG + S  +T +
Sbjct: 3164 QTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3223

Query: 319  GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            G + T+G G Y + G GS      P  V  L G +I  VA G  H + ++  G VYA+G 
Sbjct: 3224 GVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGD 3283

Query: 379  NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
            N  GQ G G       P L+    LE      V+CG+ H+
Sbjct: 3284 NDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHS 3321



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 120/268 (44%), Gaps = 42/268 (15%)

Query: 233  TLALSDIGQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAALSRG---- 286
            TL+    G ++GWG+   GQLG   G+++++     P PC   +    R   L  G    
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKV-----PTPC--EALATLRPVQLIGGEQTL 3997

Query: 287  -SVNSEGPGF-------------------------RVPGNYVKGIAC--GGRHSAVITDA 318
             +V ++G  +                          +   ++K +A   GG+H   ++  
Sbjct: 3998 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4057

Query: 319  GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            G + ++G    G+ G G+      P  + SL GI++  VAAG  H+ C+++ GD+Y +G 
Sbjct: 4058 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGK 4117

Query: 379  NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
             ++G+LG    + +  P+L++A     V   +   G   T  + DD  V+ WG   YG+L
Sbjct: 4118 GRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKL 4177

Query: 439  GLGDVIDRNIPSQV-TIEGCVPRNVACG 465
            G G      +P ++ ++ G     V CG
Sbjct: 4178 GRGGSDGCKVPMKIDSLTGLGVVKVECG 4205



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 92/217 (42%), Gaps = 38/217 (17%)

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
           SS DE   A P LV    G+++  VA  +G   TLA+++ GQVW WG G  G+LG G   
Sbjct: 587 SSEDE---AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG--- 640

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITD 317
                                     GS   + P    ++    V  + CG + S  +T 
Sbjct: 641 --------------------------GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTK 674

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
            G + ++G G   + G G+ +    P  +  L G ++  VAAG  H + ++ D +V+++G
Sbjct: 675 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
            N   Q         T P     P L+  H   ++CG
Sbjct: 735 SND--QCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 120/276 (43%), Gaps = 48/276 (17%)

Query: 205  DENLSAFPCLVTLNP---------GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG- 254
            +E+L+A P L + N          G  I   AAG      +    +V+ WG   + QLG 
Sbjct: 2917 EEDLAAVPFLASDNEEEEDEKGNSGSLIRKKAAGLESAATIR--TKVFVWGLNDKDQLGG 2974

Query: 255  -LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSA 313
              GS+I++            S+ +  SA                  N V+ +A G +   
Sbjct: 2975 LKGSKIKV-----------PSFSETLSAL-----------------NVVQ-VAGGSKSLF 3005

Query: 314  VITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVA--AGLWHTICISSD 370
             +T  G +   G    G+ G G +   +  P  +++L    ++ VA  +G  H   ++ D
Sbjct: 3006 AVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVD 3065

Query: 371  GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
            G V+++G    G+LG         PRL++A  L+    + ++CG+ H+A +   G+++ W
Sbjct: 3066 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEA--LKTKRIRDIACGSSHSAALTSSGELYTW 3123

Query: 431  GWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACG 465
            G  +YG+LG GD   +  P  V +  G     VACG
Sbjct: 3124 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3159



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 82/310 (26%), Positives = 121/310 (39%), Gaps = 47/310 (15%)

Query: 57   AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEG 116
            A A++   K+ +WG  DD G+    S  + + P          I   A G +H  A+T  
Sbjct: 3059 ATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 3117

Query: 117  GEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGT 176
            GE+YTWG  E    GR  G     T L   + +        QV+  S+ +++   T  G 
Sbjct: 3118 GELYTWGLGE---YGR-LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173

Query: 177  DGR-GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLA 235
                G G+ G   R              G E  +    +  LN G  +  +  G + +LA
Sbjct: 3174 VFSWGDGDFGKLGR-------------GGSEGCNIPQNIERLN-GQGVCQIECGAQFSLA 3219

Query: 236  LSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF 295
            L+  G VW WG G   +LG GS +  V  P  +                         G 
Sbjct: 3220 LTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQVVE------------------------GL 3254

Query: 296  RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
            R  G  +  +A G  H   +TD+G +  +G   +GQ G G+T     P  V  L G +I 
Sbjct: 3255 R--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKIT 3312

Query: 356  GVAAGLWHTI 365
             VA G  H++
Sbjct: 3313 RVACGSSHSV 3322



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 5/73 (6%)

Query: 53   GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
            G  F++A++ S  + TWG  D   LG     S  H   P          ++  A G  HC
Sbjct: 4205 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRRPRQVQGLQGKKVIAIATGSLHC 4261

Query: 111  VAVTEGGEVYTWG 123
            V  TE GEVYTWG
Sbjct: 4262 VCCTEDGEVYTWG 4274


>gi|363728661|ref|XP_416780.3| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC418578
           [Gallus gallus]
          Length = 1212

 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 60/170 (35%), Positives = 92/170 (54%), Gaps = 4/170 (2%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           I+CG  H+AV+T  G L  FG   +GQ G GS +    P CV +L   + +    G  HT
Sbjct: 44  ISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVRKPTCVKALKPEKTKLAVCGRNHT 103

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHS-KSVSCGARHTAVIAD 423
           +  +  G+VYA GGN  GQLG G  +  T   L+      N H  K ++ G+  +A + +
Sbjct: 104 LVYTEKGNVYAAGGNSEGQLGLGDTEERTTFHLISF--FTNQHKIKQLAAGSYTSAAVTE 161

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           DG++F WG N  GQ+GL D    ++P QV + G    +++CG++H+  + 
Sbjct: 162 DGQLFVWGDNSEGQIGLADKTCVSVPCQVDV-GKPVSSISCGYYHSAFIT 210



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 99/304 (32%), Positives = 138/304 (45%), Gaps = 57/304 (18%)

Query: 213 CLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR--------IRMVSS 264
           C+  L P  +      G  HTL  ++ G V+  G   EGQLGLG          I   ++
Sbjct: 84  CVKALKPE-KTKLAVCGRNHTLVYTEKGNVYAAGGNSEGQLGLGDTEERTTFHLISFFTN 142

Query: 265 PHPIPCIESSYGKDRSAALSRGSV------NSEGP-------GFRVP-----GNYVKGIA 306
            H I  +  + G   SAA++          NSEG           VP     G  V  I+
Sbjct: 143 QHKIKQL--AAGSYTSAAVTEDGQLFVWGDNSEGQIGLADKTCVSVPCQVDVGKPVSSIS 200

Query: 307 CGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS------LLGI--QIEGVA 358
           CG  HSA IT  G L TFG    G+ G       L P  + +      +LGI  ++  VA
Sbjct: 201 CGYYHSAFITGDGELYTFGEPENGKLG-------LLPEQLKNSRVPQPVLGIMEKVNKVA 253

Query: 359 AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAET-LPRLLDAPSLENVHSKSVSCGARH 417
            G  HT+ ++  G VY FG  Q+GQLG G    +T +P+ +       +H+  V+CG  H
Sbjct: 254 CGGEHTVVLTETG-VYTFGLGQYGQLGHGTLLFKTSVPKSVKHLRSHKIHN--VTCGESH 310

Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC------VPRNVACGWWHTLL 471
           TAVIA++G +F +G  ++G+LGLG   + N  +Q     C          VACG  H L+
Sbjct: 311 TAVIAENGLMFTFGDGRHGKLGLG---EENFANQFDPALCSNFLSFTVLLVACGGCHMLV 367

Query: 472 LAVP 475
            A P
Sbjct: 368 FATP 371



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 80/289 (27%), Positives = 128/289 (44%), Gaps = 58/289 (20%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK----DRSA 281
           ++ G  HT  ++  G+++ +G    GQLGLGS+   V  P  +  ++    K     R+ 
Sbjct: 44  ISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSK-NTVRKPTCVKALKPEKTKLAVCGRNH 102

Query: 282 AL---SRGSV-----NSEGP---------------GFRVPGNYVKGIACGGRHSAVITDA 318
            L    +G+V     NSEG                 F    + +K +A G   SA +T+ 
Sbjct: 103 TLVYTEKGNVYAAGGNSEGQLGLGDTEERTTFHLISFFTNQHKIKQLAAGSYTSAAVTED 162

Query: 319 GALLTFGWGLYGQCGQGSTDDELSPNCVS----SLLGIQIEGVAAGLWHTICISSDGDVY 374
           G L  +G    GQ G           CVS      +G  +  ++ G +H+  I+ DG++Y
Sbjct: 163 GQLFVWGDNSEGQIGLA------DKTCVSVPCQVDVGKPVSSISCGYYHSAFITGDGELY 216

Query: 375 AFGGNQFGQLGTGGDQAETLPRLLDAPS--------LENVHSKSVSCGARHTAVIADDGK 426
            FG  + G+LG        LP  L            +E V+   V+CG  HT V+ + G 
Sbjct: 217 TFGEPENGKLG-------LLPEQLKNSRVPQPVLGIMEKVN--KVACGGEHTVVLTETG- 266

Query: 427 VFCWGWNKYGQLGLGDVIDR-NIPSQVT-IEGCVPRNVACGWWHTLLLA 473
           V+ +G  +YGQLG G ++ + ++P  V  +      NV CG  HT ++A
Sbjct: 267 VYTFGLGQYGQLGHGTLLFKTSVPKSVKHLRSHKIHNVTCGESHTAVIA 315


>gi|294463585|gb|ADE77321.1| unknown [Picea sitchensis]
          Length = 243

 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 90/262 (34%), Positives = 121/262 (46%), Gaps = 45/262 (17%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMV-----SSPHPIPCIESSYGKDRS 280
           +A G  H+LAL++ G+V  WG G  G+LG G +  M      SS H    I+        
Sbjct: 2   IALGSEHSLALTEDGKVLSWGLGENGRLGHGYQSSMFKFLEDSSEHTPKLIK-------- 53

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                           + G  V  IA G  HS+ I + G + TFG G   Q G G   D 
Sbjct: 54  ---------------YLEGIKVCKIAAGLLHSSCIDENGTVFTFGQGRMYQLGLGHMKDS 98

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
             P+ V  L  +Q   VA G +HT  ISS GD+Y +G ++ G LG G       P  ++ 
Sbjct: 99  SVPSIVKDLPFVQ--QVACGGYHTCAISSSGDLYTWGSSENGCLGLGSKSLAPSPERVEG 156

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGW------------NKYGQLGLGDVIDRNI 448
            SL  +H   VSCG +HTAVI+  G VF WGW            +  GQLGLG+  D   
Sbjct: 157 -SLLPLHVSEVSCGWKHTAVISG-GNVFTWGWGGSNGTFSDDGFSSGGQLGLGNDFDYLE 214

Query: 449 PSQVTIE-GCVPRNVACGWWHT 469
           PS+V  +       ++CG+ HT
Sbjct: 215 PSRVQFDRNFQALQISCGFNHT 236



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 94/183 (51%), Gaps = 21/183 (11%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQG---------STDDELSPNCVSSLLGIQIE 355
           IA G  HS  +T+ G +L++G G  G+ G G             E +P  +  L GI++ 
Sbjct: 2   IALGSEHSLALTEDGKVLSWGLGENGRLGHGYQSSMFKFLEDSSEHTPKLIKYLEGIKVC 61

Query: 356 GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL-DAPSLENVHSKSVSCG 414
            +AAGL H+ CI  +G V+ FG  +  QLG G  +  ++P ++ D P ++      V+CG
Sbjct: 62  KIAAGLLHSSCIDENGTVFTFGQGRMYQLGLGHMKDSSVPSIVKDLPFVQQ-----VACG 116

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCV----PRNVACGWWHTL 470
             HT  I+  G ++ WG ++ G LGLG       PS   +EG +       V+CGW HT 
Sbjct: 117 GYHTCAISSSGDLYTWGSSENGCLGLGS--KSLAPSPERVEGSLLPLHVSEVSCGWKHTA 174

Query: 471 LLA 473
           +++
Sbjct: 175 VIS 177



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 79/283 (27%), Positives = 116/283 (40%), Gaps = 65/283 (22%)

Query: 104 AAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFE--RQSSFLTEQVSP 161
           A G  H +A+TE G+V +WG  E   +GR+      G G    +F+    SS  T ++  
Sbjct: 3   ALGSEHSLALTEDGKVLSWGLGE---NGRL------GHGYQSSMFKFLEDSSEHTPKLIK 53

Query: 162 RSQ---VSRSSGGT--SSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVT 216
             +   V + + G   SS  D  G+     + R   L          G    S+ P +V 
Sbjct: 54  YLEGIKVCKIAAGLLHSSCIDENGTVFTFGQGRMYQLGL--------GHMKDSSVPSIVK 105

Query: 217 LNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYG 276
             P V+   VA GG HT A+S  G ++ WG    G LGLGS+  +  SP  +        
Sbjct: 106 DLPFVQ--QVACGGYHTCAISSSGDLYTWGSSENGCLGLGSK-SLAPSPERV-------- 154

Query: 277 KDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY------- 329
                            G  +P  +V  ++CG +H+AVI+  G + T+GWG         
Sbjct: 155 ----------------EGSLLP-LHVSEVSCGWKHTAVIS-GGNVFTWGWGGSNGTFSDD 196

Query: 330 -----GQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI 367
                GQ G G+  D L P+ V      Q   ++ G  HT  I
Sbjct: 197 GFSSGGQLGLGNDFDYLEPSRVQFDRNFQALQISCGFNHTAAI 239



 Score = 40.0 bits (92), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 41/118 (34%), Positives = 51/118 (43%), Gaps = 15/118 (12%)

Query: 13  VVFMWG----YLPGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLIT 68
            VF +G    Y  G    +   +  +V  LP     A    CGG      AIS S  L T
Sbjct: 78  TVFTFGQGRMYQLGLGHMKDSSVPSIVKDLPFVQQVA----CGGY--HTCAISSSGDLYT 131

Query: 69  WGSTDD--LGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGW 124
           WGS+++  LG    +     E  E   LP   S V  + GW H  AV  GG V+TWGW
Sbjct: 132 WGSSENGCLGLGSKSLAPSPERVEGSLLPLHVSEV--SCGWKH-TAVISGGNVFTWGW 186


>gi|198417628|ref|XP_002119426.1| PREDICTED: hect domain and RLD 2 [Ciona intestinalis]
          Length = 2335

 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 87/306 (28%), Positives = 131/306 (42%), Gaps = 80/306 (26%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++   V +GGRH +AL+  G V+ WG G EG+LG GSR                     +
Sbjct: 516 IKKLAVHSGGRHAMALTYDGHVYSWGDGEEGKLGHGSR---------------------A 554

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
            AL+   + +       P   ++ I+CG  HSA I  +G L T+G G+YG+ G G+    
Sbjct: 555 DALTPRKIET------FPEKCIRDISCGSSHSAAIGSSGTLYTWGHGMYGRLGHGNNHTL 608

Query: 341 LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           L P  V +L G Q+  VA G     T+C++ DG VY++G   FG+LG GG     +P+ +
Sbjct: 609 LKPKPVQALSGQQVVQVACGSRDAQTLCLTQDGLVYSWGDGDFGKLGRGGSDGCCVPKPV 668

Query: 399 DAPSLENV------------------------------------HSK------------- 409
           +  S ++V                                    H +             
Sbjct: 669 ERLSGQDVVKIECGAQFSLALSRCGLVWTWGKGDYFRLGHGSDQHVRRPQVVEGLREHKV 728

Query: 410 -SVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWW 467
             V+ GA H   + + G+VF WG N +GQ G G       P +V  +EG     +ACG  
Sbjct: 729 VDVAVGALHCLAVTEGGQVFAWGDNDHGQQGNGGTTVNRKPMKVQGLEGVKITKLACGSS 788

Query: 468 HTLLLA 473
           H++  A
Sbjct: 789 HSIAFA 794



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 93/300 (31%), Positives = 145/300 (48%), Gaps = 36/300 (12%)

Query: 210  AFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI-----RMV 262
            A P L+     V I  V+  AGG+H LALS+ G+V+ WG G +G+LG G+R      R++
Sbjct: 1481 AIPTLIESIQHVHITQVSVNAGGKHILALSNEGEVYSWGEGVDGKLGHGNRSSLDHPRII 1540

Query: 263  SSPHPIPCIESSYGKDRSAALSR---------------GSVNSEG---PGF--RVPGNYV 302
             S      ++ + G   SAA++                G  +SE    P     +  N V
Sbjct: 1541 ESLRGDLIVKVATGGSHSAAINATGGLYTWGKGRYGRLGHEDSEDQLKPKLVNALKDNLV 1600

Query: 303  KGIACGG--RHSAVITDA--GALLTFGWGL--YGQCGQGSTDDELSPNCVSSLLGIQIEG 356
              +ACG     +  IT+   G+ + + WG   YG+ G+G +D    P  + +L+G  I  
Sbjct: 1601 VDVACGNGDAQTLCITEGTGGSSVVWSWGDGDYGKLGRGGSDGCKVPAIIDTLMGKHITH 1660

Query: 357  VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR 416
            VA G   ++ +S  G VY +G   + +LG G D+    P+L++  SL  +    VS G+ 
Sbjct: 1661 VACGSQFSLALSKAGGVYTWGKGDYYRLGHGSDEHVRRPKLIE--SLRGMKVVEVSVGSL 1718

Query: 417  HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLAVP 475
            H     D+G V+ WG N  GQ+G G      IP  V  ++G    +V+CG  HT+  ++P
Sbjct: 1719 HCIAAVDNGDVYTWGDNDEGQIGDGTTQATQIPRLVAALQGHHISHVSCGSAHTVAWSLP 1778



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 99/394 (25%), Positives = 147/394 (37%), Gaps = 64/394 (16%)

Query: 65  KLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGW 124
           K+  WG  D      +   KH + P          + +   G     AVT GG+VY  G 
Sbjct: 431 KVFVWGLNDKDQLGGLKGSKH-KTPVASKDLQRLKVTQVIGGSKSLFAVTMGGKVYACGE 489

Query: 125 KECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGT---DGR-- 179
                SGR+      G G       R +  L  Q  P  +++  SGG  +     DG   
Sbjct: 490 ST---SGRL------GLGPVTGSVSRLTQVLFPQ--PIKKLAVHSGGRHAMALTYDGHVY 538

Query: 180 --GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS 237
             G GEEG                  G    +  P  +   P   I  ++ G  H+ A+ 
Sbjct: 539 SWGDGEEGKL--------------GHGSRADALTPRKIETFPEKCIRDISCGSSHSAAIG 584

Query: 238 DIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIE------------------------- 272
             G ++ WG+G  G+LG G+   ++  P P+  +                          
Sbjct: 585 SSGTLYTWGHGMYGRLGHGNNHTLLK-PKPVQALSGQQVVQVACGSRDAQTLCLTQDGLV 643

Query: 273 SSYGKDRSAALSRGSVN---SEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
            S+G      L RG  +      P  R+ G  V  I CG + S  ++  G + T+G G Y
Sbjct: 644 YSWGDGDFGKLGRGGSDGCCVPKPVERLSGQDVVKIECGAQFSLALSRCGLVWTWGKGDY 703

Query: 330 GQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD 389
            + G GS      P  V  L   ++  VA G  H + ++  G V+A+G N  GQ G GG 
Sbjct: 704 FRLGHGSDQHVRRPQVVEGLREHKVVDVAVGALHCLAVTEGGQVFAWGDNDHGQQGNGGT 763

Query: 390 QAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
                P  +    LE V    ++CG+ H+   AD
Sbjct: 764 TVNRKP--MKVQGLEGVKITKLACGSSHSIAFAD 795



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 109/232 (46%), Gaps = 38/232 (16%)

Query: 240  GQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRV 297
            G ++GWG+   GQLG   G+++++     PIPC          AAL              
Sbjct: 1407 GSIFGWGHNHRGQLGGPEGAKVKI-----PIPC-------PSLAALK------------- 1441

Query: 298  PGNYVKGIACGGRHSA-VITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG 356
            P   V     GG  +   +T  G +   G+G  G+ G GS +    P  + S+  + I  
Sbjct: 1442 PIQLV-----GGEQTLFTVTGEGKVFATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQ 1496

Query: 357  VA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
            V+  AG  H + +S++G+VY++G    G+LG G   +   PR+++  SL       V+ G
Sbjct: 1497 VSVNAGGKHILALSNEGEVYSWGEGVDGKLGHGNRSSLDHPRIIE--SLRGDLIVKVATG 1554

Query: 415  ARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACG 465
              H+A I   G ++ WG  +YG+LG  D  D+  P  V  ++  +  +VACG
Sbjct: 1555 GSHSAAINATGGLYTWGKGRYGRLGHEDSEDQLKPKLVNALKDNLVVDVACG 1606



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 126/270 (46%), Gaps = 40/270 (14%)

Query: 212  PCLVTLNPGVRIATVAAGGRHTL-ALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPC 270
            P L  L P         GG  TL  ++  G+V+  GYG  G+LG+GS    V+ P  I  
Sbjct: 1435 PSLAALKP-----IQLVGGEQTLFTVTGEGKVFATGYGAGGRLGIGSN-ESVAIPTLIES 1488

Query: 271  IESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
            I+  +       +++ SVN+                 GG+H   +++ G + ++G G+ G
Sbjct: 1489 IQHVH-------ITQVSVNA-----------------GGKHILALSNEGEVYSWGEGVDG 1524

Query: 331  QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            + G G+      P  + SL G  I  VA G  H+  I++ G +Y +G  ++G+LG    +
Sbjct: 1525 KLGHGNRSSLDHPRIIESLRGDLIVKVATGGSHSAAINATGGLYTWGKGRYGRLGHEDSE 1584

Query: 391  AETLPRLLDAPSLENVHSKSVSCGA--RHTAVIAD----DGKVFCWGWNKYGQLGLGDVI 444
             +  P+L++A  L++     V+CG     T  I +       V+ WG   YG+LG G   
Sbjct: 1585 DQLKPKLVNA--LKDNLVVDVACGNGDAQTLCITEGTGGSSVVWSWGDGDYGKLGRGGSD 1642

Query: 445  DRNIPSQV-TIEGCVPRNVACGWWHTLLLA 473
               +P+ + T+ G    +VACG   +L L+
Sbjct: 1643 GCKVPAIIDTLMGKHITHVACGSQFSLALS 1672



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 89/360 (24%), Positives = 133/360 (36%), Gaps = 69/360 (19%)

Query: 58   MAISDSRKLITWGSTDD--LGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTE 115
            +A+S+  ++ +WG   D  LG    +S  H  I E         IVK A G +H  A+  
Sbjct: 1507 LALSNEGEVYSWGEGVDGKLGHGNRSSLDHPRIIESL---RGDLIVKVATGGSHSAAINA 1563

Query: 116  GGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSG 175
             G +YTWG       GR +G L      D+ +  +  + L + +            T   
Sbjct: 1564 TGGLYTWG------KGR-YGRLGHEDSEDQ-LKPKLVNALKDNLVVDVACGNGDAQTLCI 1615

Query: 176  TDGRG---------SGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATV 226
            T+G G          G+ G   R              G  +    P ++    G  I  V
Sbjct: 1616 TEGTGGSSVVWSWGDGDYGKLGR--------------GGSDGCKVPAIIDTLMGKHITHV 1661

Query: 227  AAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRG 286
            A G + +LALS  G V+ WG G   +LG GS    V  P  I  +               
Sbjct: 1662 ACGSQFSLALSKAGGVYTWGKGDYYRLGHGSD-EHVRRPKLIESLR-------------- 1706

Query: 287  SVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCV 346
                        G  V  ++ G  H     D G + T+G    GQ G G+T     P  V
Sbjct: 1707 ------------GMKVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIGDGTTQATQIPRLV 1754

Query: 347  SSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENV 406
            ++L G  I  V+ G  HT+  S   + +    N   +  TG    + +P  L+   L+N+
Sbjct: 1755 AALQGHHISHVSCGSAHTVAWSLPSESH----NMHKRRRTGAKLPDQIP--LEYNLLQNI 1808



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 67/154 (43%), Gaps = 6/154 (3%)

Query: 320 ALLTFGWGL--YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
           A   F WGL    Q G        +P     L  +++  V  G      ++  G VYA G
Sbjct: 429 AAKVFVWGLNDKDQLGGLKGSKHKTPVASKDLQRLKVTQVIGGSKSLFAVTMGGKVYACG 488

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQ 437
            +  G+LG G     ++ RL      + +   +V  G RH   +  DG V+ WG  + G+
Sbjct: 489 ESTSGRLGLGPVTG-SVSRLTQVLFPQPIKKLAVHSGGRHAMALTYDGHVYSWGDGEEGK 547

Query: 438 LGLGDVIDRNIPSQVTI--EGCVPRNVACGWWHT 469
           LG G   D   P ++    E C+ R+++CG  H+
Sbjct: 548 LGHGSRADALTPRKIETFPEKCI-RDISCGSSHS 580



 Score = 40.4 bits (93), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 5/73 (6%)

Query: 53   GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
            G  F++A+S +  + TWG  D   LG     S +H   P+         +V+ + G  HC
Sbjct: 1664 GSQFSLALSKAGGVYTWGKGDYYRLGHG---SDEHVRRPKLIESLRGMKVVEVSVGSLHC 1720

Query: 111  VAVTEGGEVYTWG 123
            +A  + G+VYTWG
Sbjct: 1721 IAAVDNGDVYTWG 1733


>gi|157821067|ref|NP_001100990.1| E3 ubiquitin-protein ligase HERC2 [Rattus norvegicus]
 gi|149031474|gb|EDL86454.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
           RCC1 (CHC1)-like domain (RLD) 2 (predicted) [Rattus
           norvegicus]
          Length = 4779

 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 86/292 (29%), Positives = 145/292 (49%), Gaps = 31/292 (10%)

Query: 186 SKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAA--GGRHTLALSDIGQVW 243
           +++R + L++     + + + ++ A P LV       I  +AA   G H LAL+  G+V+
Sbjct: 405 AEKRFLILSRNGRVYTQAYNSDMLA-PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY 463

Query: 244 GWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVK 303
            WG G  G+LG G  +     P   P + S++   ++                  G +V 
Sbjct: 464 SWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA------------------GKHVV 500

Query: 304 GIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA--AGL 361
            IACG  +SA IT  G L T+G G YG+ G GS++DE  P  V+ L G+++  VA  +G 
Sbjct: 501 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGD 560

Query: 362 WHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
             T+ ++ +G V+++G   +G+LG GG      P+L++   L+++    V CG++ +  +
Sbjct: 561 AQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE--KLQDLDVIKVRCGSQFSIAL 618

Query: 422 ADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
             DG+V+ WG     +LG G       P  +  ++G    +VA G  H L L
Sbjct: 619 TKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 670



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 128/303 (42%), Gaps = 80/303 (26%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GGRH  AL+  G+V+ WG G +G+LG  SR+     P  I  +++   +D  
Sbjct: 2991 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRD-- 3047

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                    IACG  HSA +T +G L T+G G YG+ G G    +
Sbjct: 3048 ------------------------IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ 3083

Query: 341  LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V  LLG ++  VA G     T+ ++ +G V+++G   FG+LG GG +   +P+ +
Sbjct: 3084 LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNI 3143

Query: 399  DAPSLE------------------------------------NVHSKS------------ 410
            +  + +                                    +VH +             
Sbjct: 3144 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI 3203

Query: 411  --VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWW 467
              V+ GA H   + D G+V+ WG N +GQ G G       P+ V  +EG     VACG  
Sbjct: 3204 VHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3263

Query: 468  HTL 470
            H++
Sbjct: 3264 HSV 3266



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 144/365 (39%), Gaps = 82/365 (22%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V   +G  HC+A++  GEVY+WG  E         D   G G ++   +R    + E + 
Sbjct: 3987 VAVNSGGKHCLALSSEGEVYSWGEAE---------DGKLGHG-NRSPCDRPR--VIESLR 4034

Query: 161  PRSQVSRSSGGTSSG-TDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
                V  ++GG  S      G      K R   L    +E            P LV    
Sbjct: 4035 GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLK--------PKLVEALQ 4086

Query: 220  GVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
            G R+  +A  +G   TL L+D   VW WG G  G+LG G                   G 
Sbjct: 4087 GHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-------------------GS 4127

Query: 278  DRSAALSRGSVNSEGPGFRVPGNY-------VKGIACGGRHSAVITDAGALLTFGWGLYG 330
            D               G +VP          V  + CG + S  +T +GA+ T+G G Y 
Sbjct: 4128 D---------------GCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4172

Query: 331  QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            + G GS D    P  V  L G ++  +A G  H +C + DG+VY +G N  GQLG G   
Sbjct: 4173 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTN 4232

Query: 391  AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
            A   PRL+ A  L+      V+CG+ HT           W  +K    G        +P+
Sbjct: 4233 AIQRPRLVAA--LQGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPA 4274

Query: 451  QVTIE 455
            QV +E
Sbjct: 4275 QVPME 4279



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 163/389 (41%), Gaps = 60/389 (15%)

Query: 65   KLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGW 124
            K+  WG  +D  Q     G   ++P      +  ++V+ A G     AVT  G+VY+ G 
Sbjct: 2904 KVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGE 2962

Query: 125  KECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG---TSSGTDGR-- 179
                 +GR+   +S+GT        RQ + L+  V  +  V+  SGG   T+   DG+  
Sbjct: 2963 ---ATNGRLGLGMSSGTV----PIPRQITALSSYVVKK--VAVHSGGRHATALTVDGKVF 3013

Query: 180  --GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS 237
              G G++G         K    S  + D+     P L+      RI  +A G  H+ AL+
Sbjct: 3014 SWGEGDDG---------KLGHFSRMNCDK-----PRLIEALKTKRIRDIACGSSHSAALT 3059

Query: 238  DIGQVWGWGYGGEGQLGLGS-----RIRMVSSPHPIPCIESSYGKDRSAALS---RGSVN 289
              G+++ WG G  G+LG G      + +MV        I+ + G   +  L+    G V 
Sbjct: 3060 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 3119

Query: 290  SEGPG-------------------FRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
            S G G                    R+ G  V  I CG + S  +T +G + T+G G Y 
Sbjct: 3120 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 3179

Query: 331  QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            + G GS      P  V  L G +I  VA G  H + ++  G VYA+G N  GQ G G   
Sbjct: 3180 RLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTT 3239

Query: 391  AETLPRLLDAPSLENVHSKSVSCGARHTA 419
                P L+    LE      V+CG+ H+ 
Sbjct: 3240 VNRKPTLVQG--LEGQKITRVACGSSHSV 3266



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 70/276 (25%), Positives = 123/276 (44%), Gaps = 50/276 (18%)

Query: 225  TVAAGGRHTLALSDIGQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAA 282
            T++AGG         G ++GWG+   GQLG   G+++++     P PC   +    R   
Sbjct: 3890 TLSAGGS--------GTIYGWGHNHRGQLGGIEGAKVKV-----PTPC--EALATLRPVQ 3934

Query: 283  LSRG-----SVNSEGPGF-------------------------RVPGNYVKGIAC--GGR 310
            L  G     +V ++G  +                          +   ++K +A   GG+
Sbjct: 3935 LIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGK 3994

Query: 311  HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
            H   ++  G + ++G    G+ G G+      P  + SL GI++  VAAG  H+ C+++ 
Sbjct: 3995 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAA 4054

Query: 371  GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
            GD+Y +G  ++G+LG    + +  P+L++A     V   +   G   T  + DD  V+ W
Sbjct: 4055 GDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSW 4114

Query: 431  GWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
            G   YG+LG G      +P ++ ++ G     V CG
Sbjct: 4115 GDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECG 4150



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 92/217 (42%), Gaps = 38/217 (17%)

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
           SS DE   A P LV    G+++  VA  +G   TLA+++ GQVW WG G  G+LG G   
Sbjct: 533 SSEDE---AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG--- 586

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITD 317
                                     GS   + P    ++    V  + CG + S  +T 
Sbjct: 587 --------------------------GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTK 620

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
            G + ++G G   + G G+ +    P  +  L G ++  VAAG  H + ++ D +V+++G
Sbjct: 621 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 680

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
            N   Q         T P     P L+  H   ++CG
Sbjct: 681 SND--QCQHFDTLRVTKPEPTALPGLDTKHIVGIACG 715



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 83/168 (49%), Gaps = 6/168 (3%)

Query: 302  VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVA-- 358
            V  +A G +    +T  G + + G    G+ G G +   +  P  +++L    ++ VA  
Sbjct: 2938 VVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVH 2997

Query: 359  AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
            +G  H   ++ DG V+++G    G+LG         PRL++A  L+    + ++CG+ H+
Sbjct: 2998 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA--LKTKRIRDIACGSSHS 3055

Query: 419  AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACG 465
            A +   G+++ WG  +YG+LG GD   +  P  V +  G     VACG
Sbjct: 3056 AALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3103



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 5/73 (6%)

Query: 53   GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
            G  F++A++ S  + TWG  D   LG     S  H   P          ++  A G  HC
Sbjct: 4150 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRRPRQVQGLQGKKVIAIATGSLHC 4206

Query: 111  VAVTEGGEVYTWG 123
            V  TE GEVYTWG
Sbjct: 4207 VCCTEDGEVYTWG 4219


>gi|410265952|gb|JAA20942.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 129/255 (50%), Gaps = 29/255 (11%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           V+IA   + G H LAL+  G+V+ WG G  G+LG G  +     P   P + S++   ++
Sbjct: 496 VKIAA-HSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 549

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                             G +V  IACG  +SA IT  G L T+G G YG+ G GS++DE
Sbjct: 550 ------------------GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 591

Query: 341 LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
             P  V+ L G+++  VA  +G   T+ ++ +G V+++G   +G+LG GG      P+L+
Sbjct: 592 AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLI 651

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGC 457
           +   L+++    V CG++ +  +  DG+V+ WG     +LG G       P  +  ++G 
Sbjct: 652 E--KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGK 709

Query: 458 VPRNVACGWWHTLLL 472
              +VA G  H L L
Sbjct: 710 KVIDVAAGSTHCLAL 724



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 128/303 (42%), Gaps = 80/303 (26%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GGRH  AL+  G+V+ WG G +G+LG  SR+     P  I  +++   +D  
Sbjct: 3047 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRD-- 3103

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                    IACG  HSA +T +G L T+G G YG+ G G    +
Sbjct: 3104 ------------------------IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ 3139

Query: 341  LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V  LLG ++  VA G     T+ ++ +G V+++G   FG+LG GG +   +P+ +
Sbjct: 3140 LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNI 3199

Query: 399  DAPSLE------------------------------------NVHSKS------------ 410
            +  + +                                    +VH +             
Sbjct: 3200 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI 3259

Query: 411  --VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWW 467
              V+ GA H   + D G+V+ WG N +GQ G G       P+ V  +EG     VACG  
Sbjct: 3260 VHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3319

Query: 468  HTL 470
            H++
Sbjct: 3320 HSV 3322



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 144/365 (39%), Gaps = 82/365 (22%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V   +G  HC+A++  GEVY+WG  E         D   G G ++   +R    + E + 
Sbjct: 4042 VAVNSGGKHCLALSSEGEVYSWGEAE---------DGKLGHG-NRSPCDRPR--VIESLR 4089

Query: 161  PRSQVSRSSGGTSSG-TDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
                V  ++GG  S      G      K R   L    +E            P LV    
Sbjct: 4090 GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLK--------PKLVEALQ 4141

Query: 220  GVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
            G R+  +A  +G   TL L+D   VW WG G  G+LG G                   G 
Sbjct: 4142 GHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-------------------GS 4182

Query: 278  DRSAALSRGSVNSEGPGFRVPGNY-------VKGIACGGRHSAVITDAGALLTFGWGLYG 330
            D               G +VP          V  + CG + S  +T +GA+ T+G G Y 
Sbjct: 4183 D---------------GCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4227

Query: 331  QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            + G GS D    P  V  L G ++  +A G  H +C + DG+VY +G N  GQLG G   
Sbjct: 4228 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTN 4287

Query: 391  AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
            A   PRL+ A  L+      V+CG+ HT           W  +K    G        +P+
Sbjct: 4288 AIQRPRLVAA--LQGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPA 4329

Query: 451  QVTIE 455
            QV +E
Sbjct: 4330 QVPME 4334



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 165/400 (41%), Gaps = 60/400 (15%)

Query: 53   GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
              G   A +   K+  WG  +D  Q     G   ++P      +  ++V+ A G     A
Sbjct: 2948 AAGLESAATIRTKVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 3006

Query: 113  VTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG- 171
            VT  G+VY  G      +GR+   +S+GT        RQ + L+  V  +  V+  SGG 
Sbjct: 3007 VTVEGKVYACGE---ATNGRLGLGISSGTV----PIPRQITALSSYVVKK--VAVHSGGR 3057

Query: 172  --TSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIAT 225
              T+   DG+    G G++G         K    S  + D+     P L+      RI  
Sbjct: 3058 HATALTVDGKVFSWGEGDDG---------KLGHFSRMNCDK-----PRLIEALKTKRIRD 3103

Query: 226  VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS-----RIRMVSSPHPIPCIESSYGKDRS 280
            +A G  H+ AL+  G+++ WG G  G+LG G      + +MV        I+ + G   +
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3163

Query: 281  AALS---RGSVNSEGPG-------------------FRVPGNYVKGIACGGRHSAVITDA 318
              L+    G V S G G                    R+ G  V  I CG + S  +T +
Sbjct: 3164 QTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3223

Query: 319  GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            G + T+G G Y + G GS      P  V  L G +I  VA G  H + ++  G VYA+G 
Sbjct: 3224 GVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGD 3283

Query: 379  NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
            N  GQ G G       P L+    LE      V+CG+ H+
Sbjct: 3284 NDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHS 3321



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 120/268 (44%), Gaps = 42/268 (15%)

Query: 233  TLALSDIGQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAALSRG---- 286
            TL+    G ++GWG+   GQLG   G+++++     P PC   +    R   L  G    
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKV-----PTPC--EALATLRPVQLIGGEQTL 3997

Query: 287  -SVNSEGPGF-------------------------RVPGNYVKGIAC--GGRHSAVITDA 318
             +V ++G  +                          +   ++K +A   GG+H   ++  
Sbjct: 3998 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4057

Query: 319  GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            G + ++G    G+ G G+      P  + SL GI++  VAAG  H+ C+++ GD+Y +G 
Sbjct: 4058 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGK 4117

Query: 379  NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
             ++G+LG    + +  P+L++A     V   +   G   T  + DD  V+ WG   YG+L
Sbjct: 4118 GRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKL 4177

Query: 439  GLGDVIDRNIPSQV-TIEGCVPRNVACG 465
            G G      +P ++ ++ G     V CG
Sbjct: 4178 GRGGSDGCKVPMKIDSLTGLGVVKVECG 4205



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 92/217 (42%), Gaps = 38/217 (17%)

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
           SS DE   A P LV    G+++  VA  +G   TLA+++ GQVW WG G  G+LG G   
Sbjct: 587 SSEDE---AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG--- 640

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITD 317
                                     GS   + P    ++    V  + CG + S  +T 
Sbjct: 641 --------------------------GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTK 674

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
            G + ++G G   + G G+ +    P  +  L G ++  VAAG  H + ++ D +V+++G
Sbjct: 675 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
            N   Q         T P     P L+  H   ++CG
Sbjct: 735 SND--QCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 120/276 (43%), Gaps = 48/276 (17%)

Query: 205  DENLSAFPCLVTLNP---------GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG- 254
            +E+L+A P L + N          G  I   AAG      +    +V+ WG   + QLG 
Sbjct: 2917 EEDLAAVPFLASDNEEEEDEKGNSGSLIRKKAAGLESAATIR--TKVFVWGLNDKDQLGG 2974

Query: 255  -LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSA 313
              GS+I++            S+ +  SA                  N V+ +A G +   
Sbjct: 2975 LKGSKIKV-----------PSFSETLSAL-----------------NVVQ-VAGGSKSLF 3005

Query: 314  VITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVA--AGLWHTICISSD 370
             +T  G +   G    G+ G G +   +  P  +++L    ++ VA  +G  H   ++ D
Sbjct: 3006 AVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVD 3065

Query: 371  GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
            G V+++G    G+LG         PRL++A  L+    + ++CG+ H+A +   G+++ W
Sbjct: 3066 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEA--LKTKRIRDIACGSSHSAALTSSGELYTW 3123

Query: 431  GWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACG 465
            G  +YG+LG GD   +  P  V +  G     VACG
Sbjct: 3124 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3159



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 82/310 (26%), Positives = 121/310 (39%), Gaps = 47/310 (15%)

Query: 57   AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEG 116
            A A++   K+ +WG  DD G+    S  + + P          I   A G +H  A+T  
Sbjct: 3059 ATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 3117

Query: 117  GEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGT 176
            GE+YTWG  E    GR  G     T L   + +        QV+  S+ +++   T  G 
Sbjct: 3118 GELYTWGLGE---YGR-LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173

Query: 177  DGR-GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLA 235
                G G+ G   R              G E  +    +  LN G  +  +  G + +LA
Sbjct: 3174 VFSWGDGDFGKLGR-------------GGSEGCNIPQNIERLN-GQGVCQIECGAQFSLA 3219

Query: 236  LSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF 295
            L+  G VW WG G   +LG GS +  V  P  +                         G 
Sbjct: 3220 LTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQVVE------------------------GL 3254

Query: 296  RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
            R  G  +  +A G  H   +TD+G +  +G   +GQ G G+T     P  V  L G +I 
Sbjct: 3255 R--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKIT 3312

Query: 356  GVAAGLWHTI 365
             VA G  H++
Sbjct: 3313 RVACGSSHSV 3322



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 5/73 (6%)

Query: 53   GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
            G  F++A++ S  + TWG  D   LG     S  H   P          ++  A G  HC
Sbjct: 4205 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRRPRQVQGLQGKKVIAIATGSLHC 4261

Query: 111  VAVTEGGEVYTWG 123
            V  TE GEVYTWG
Sbjct: 4262 VCCTEDGEVYTWG 4274


>gi|410265950|gb|JAA20941.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 129/255 (50%), Gaps = 29/255 (11%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           V+IA   + G H LAL+  G+V+ WG G  G+LG G  +     P   P + S++   ++
Sbjct: 496 VKIAA-HSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 549

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                             G +V  IACG  +SA IT  G L T+G G YG+ G GS++DE
Sbjct: 550 ------------------GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 591

Query: 341 LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
             P  V+ L G+++  VA  +G   T+ ++ +G V+++G   +G+LG GG      P+L+
Sbjct: 592 AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLI 651

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGC 457
           +   L+++    V CG++ +  +  DG+V+ WG     +LG G       P  +  ++G 
Sbjct: 652 E--KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGK 709

Query: 458 VPRNVACGWWHTLLL 472
              +VA G  H L L
Sbjct: 710 KVIDVAAGSTHCLAL 724



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 128/303 (42%), Gaps = 80/303 (26%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GGRH  AL+  G+V+ WG G +G+LG  SR+     P  I  +++   +D  
Sbjct: 3047 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRD-- 3103

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                    IACG  HSA +T +G L T+G G YG+ G G    +
Sbjct: 3104 ------------------------IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ 3139

Query: 341  LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V  LLG ++  VA G     T+ ++ +G V+++G   FG+LG GG +   +P+ +
Sbjct: 3140 LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNI 3199

Query: 399  DAPSLE------------------------------------NVHSKS------------ 410
            +  + +                                    +VH +             
Sbjct: 3200 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI 3259

Query: 411  --VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWW 467
              V+ GA H   + D G+V+ WG N +GQ G G       P+ V  +EG     VACG  
Sbjct: 3260 VHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3319

Query: 468  HTL 470
            H++
Sbjct: 3320 HSV 3322



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 144/365 (39%), Gaps = 82/365 (22%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V   +G  HC+A++  GEVY+WG  E         D   G G ++   +R    + E + 
Sbjct: 4042 VAVNSGGKHCLALSSEGEVYSWGEAE---------DGKLGHG-NRSPCDRPR--VIESLR 4089

Query: 161  PRSQVSRSSGGTSSG-TDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
                V  ++GG  S      G      K R   L    +E            P LV    
Sbjct: 4090 GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLK--------PKLVEALQ 4141

Query: 220  GVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
            G R+  +A  +G   TL L+D   VW WG G  G+LG G                   G 
Sbjct: 4142 GHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-------------------GS 4182

Query: 278  DRSAALSRGSVNSEGPGFRVPGNY-------VKGIACGGRHSAVITDAGALLTFGWGLYG 330
            D               G +VP          V  + CG + S  +T +GA+ T+G G Y 
Sbjct: 4183 D---------------GCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4227

Query: 331  QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            + G GS D    P  V  L G ++  +A G  H +C + DG+VY +G N  GQLG G   
Sbjct: 4228 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTN 4287

Query: 391  AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
            A   PRL+ A  L+      V+CG+ HT           W  +K    G        +P+
Sbjct: 4288 AIQRPRLVAA--LQGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPA 4329

Query: 451  QVTIE 455
            QV +E
Sbjct: 4330 QVPME 4334



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 165/400 (41%), Gaps = 60/400 (15%)

Query: 53   GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
              G   A +   K+  WG  +D  Q     G   ++P      +  ++V+ A G     A
Sbjct: 2948 AAGLESAATIRTKVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 3006

Query: 113  VTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG- 171
            VT  G+VY  G      +GR+   +S+GT        RQ + L+  V  +  V+  SGG 
Sbjct: 3007 VTVEGKVYACGE---ATNGRLGLGISSGTV----PIPRQITALSSYVVKK--VAVHSGGR 3057

Query: 172  --TSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIAT 225
              T+   DG+    G G++G         K    S  + D+     P L+      RI  
Sbjct: 3058 HATALTVDGKVFSWGEGDDG---------KLGHFSRMNCDK-----PRLIEALKTKRIRD 3103

Query: 226  VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS-----RIRMVSSPHPIPCIESSYGKDRS 280
            +A G  H+ AL+  G+++ WG G  G+LG G      + +MV        I+ + G   +
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3163

Query: 281  AALS---RGSVNSEGPG-------------------FRVPGNYVKGIACGGRHSAVITDA 318
              L+    G V S G G                    R+ G  V  I CG + S  +T +
Sbjct: 3164 QTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3223

Query: 319  GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            G + T+G G Y + G GS      P  V  L G +I  VA G  H + ++  G VYA+G 
Sbjct: 3224 GVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGD 3283

Query: 379  NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
            N  GQ G G       P L+    LE      V+CG+ H+
Sbjct: 3284 NDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHS 3321



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 120/268 (44%), Gaps = 42/268 (15%)

Query: 233  TLALSDIGQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAALSRG---- 286
            TL+    G ++GWG+   GQLG   G+++++     P PC   +    R   L  G    
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKV-----PTPC--EALATLRPVQLIGGEQTL 3997

Query: 287  -SVNSEGPGF-------------------------RVPGNYVKGIAC--GGRHSAVITDA 318
             +V ++G  +                          +   ++K +A   GG+H   ++  
Sbjct: 3998 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4057

Query: 319  GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            G + ++G    G+ G G+      P  + SL GI++  VAAG  H+ C+++ GD+Y +G 
Sbjct: 4058 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGK 4117

Query: 379  NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
             ++G+LG    + +  P+L++A     V   +   G   T  + DD  V+ WG   YG+L
Sbjct: 4118 GRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKL 4177

Query: 439  GLGDVIDRNIPSQV-TIEGCVPRNVACG 465
            G G      +P ++ ++ G     V CG
Sbjct: 4178 GRGGSDGCKVPMKIDSLTGLGVVKVECG 4205



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 92/217 (42%), Gaps = 38/217 (17%)

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
           SS DE   A P LV    G+++  VA  +G   TLA+++ GQVW WG G  G+LG G   
Sbjct: 587 SSEDE---AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG--- 640

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITD 317
                                     GS   + P    ++    V  + CG + S  +T 
Sbjct: 641 --------------------------GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTK 674

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
            G + ++G G   + G G+ +    P  +  L G ++  VAAG  H + ++ D +V+++G
Sbjct: 675 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
            N   Q         T P     P L+  H   ++CG
Sbjct: 735 SND--QCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 120/276 (43%), Gaps = 48/276 (17%)

Query: 205  DENLSAFPCLVTLNP---------GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG- 254
            +E+L+A P L + N          G  I   AAG      +    +V+ WG   + QLG 
Sbjct: 2917 EEDLAAVPFLASDNEEEEDEKGNSGSLIRKKAAGLESAATIR--TKVFVWGLNDKDQLGG 2974

Query: 255  -LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSA 313
              GS+I++            S+ +  SA                  N V+ +A G +   
Sbjct: 2975 LKGSKIKV-----------PSFSETLSAL-----------------NVVQ-VAGGSKSLF 3005

Query: 314  VITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVA--AGLWHTICISSD 370
             +T  G +   G    G+ G G +   +  P  +++L    ++ VA  +G  H   ++ D
Sbjct: 3006 AVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVD 3065

Query: 371  GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
            G V+++G    G+LG         PRL++A  L+    + ++CG+ H+A +   G+++ W
Sbjct: 3066 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEA--LKTKRIRDIACGSSHSAALTSSGELYTW 3123

Query: 431  GWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACG 465
            G  +YG+LG GD   +  P  V +  G     VACG
Sbjct: 3124 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3159



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 82/310 (26%), Positives = 121/310 (39%), Gaps = 47/310 (15%)

Query: 57   AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEG 116
            A A++   K+ +WG  DD G+    S  + + P          I   A G +H  A+T  
Sbjct: 3059 ATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 3117

Query: 117  GEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGT 176
            GE+YTWG  E    GR  G     T L   + +        QV+  S+ +++   T  G 
Sbjct: 3118 GELYTWGLGE---YGR-LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173

Query: 177  DGR-GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLA 235
                G G+ G   R              G E  +    +  LN G  +  +  G + +LA
Sbjct: 3174 VFSWGDGDFGKLGR-------------GGSEGCNIPQNIERLN-GQGVCQIECGAQFSLA 3219

Query: 236  LSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF 295
            L+  G VW WG G   +LG GS +  V  P  +                         G 
Sbjct: 3220 LTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQVVE------------------------GL 3254

Query: 296  RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
            R  G  +  +A G  H   +TD+G +  +G   +GQ G G+T     P  V  L G +I 
Sbjct: 3255 R--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKIT 3312

Query: 356  GVAAGLWHTI 365
             VA G  H++
Sbjct: 3313 RVACGSSHSV 3322



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 5/73 (6%)

Query: 53   GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
            G  F++A++ S  + TWG  D   LG     S  H   P          ++  A G  HC
Sbjct: 4205 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRRPRQVQGLQGKKVIAIATGSLHC 4261

Query: 111  VAVTEGGEVYTWG 123
            V  TE GEVYTWG
Sbjct: 4262 VCCTEDGEVYTWG 4274


>gi|126032348|ref|NP_004658.3| E3 ubiquitin-protein ligase HERC2 [Homo sapiens]
 gi|308153453|sp|O95714.2|HERC2_HUMAN RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
           domain and RCC1-like domain-containing protein 2
          Length = 4834

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 129/255 (50%), Gaps = 29/255 (11%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           V+IA   + G H LAL+  G+V+ WG G  G+LG G  +     P   P + S++   ++
Sbjct: 496 VKIAA-HSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 549

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                             G +V  IACG  +SA IT  G L T+G G YG+ G GS++DE
Sbjct: 550 ------------------GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 591

Query: 341 LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
             P  V+ L G+++  VA  +G   T+ ++ +G V+++G   +G+LG GG      P+L+
Sbjct: 592 AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLI 651

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGC 457
           +   L+++    V CG++ +  +  DG+V+ WG     +LG G       P  +  ++G 
Sbjct: 652 E--KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGK 709

Query: 458 VPRNVACGWWHTLLL 472
              +VA G  H L L
Sbjct: 710 KVIDVAAGSTHCLAL 724



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 128/303 (42%), Gaps = 80/303 (26%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GGRH  AL+  G+V+ WG G +G+LG  SR+     P  I  +++   +D  
Sbjct: 3047 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRD-- 3103

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                    IACG  HSA +T +G L T+G G YG+ G G    +
Sbjct: 3104 ------------------------IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ 3139

Query: 341  LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V  LLG ++  VA G     T+ ++ +G V+++G   FG+LG GG +   +P+ +
Sbjct: 3140 LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNI 3199

Query: 399  DAPSLE------------------------------------NVHSKS------------ 410
            +  + +                                    +VH +             
Sbjct: 3200 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI 3259

Query: 411  --VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWW 467
              V+ GA H   + D G+V+ WG N +GQ G G       P+ V  +EG     VACG  
Sbjct: 3260 VHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3319

Query: 468  HTL 470
            H++
Sbjct: 3320 HSV 3322



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 144/365 (39%), Gaps = 82/365 (22%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V   +G  HC+A++  GEVY+WG  E         D   G G ++   +R    + E + 
Sbjct: 4042 VAVNSGGKHCLALSSEGEVYSWGEAE---------DGKLGHG-NRSPCDRPR--VIESLR 4089

Query: 161  PRSQVSRSSGGTSSG-TDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
                V  ++GG  S      G      K R   L    +E            P LV    
Sbjct: 4090 GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLK--------PKLVEALQ 4141

Query: 220  GVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
            G R+  +A  +G   TL L+D   VW WG G  G+LG G                   G 
Sbjct: 4142 GHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-------------------GS 4182

Query: 278  DRSAALSRGSVNSEGPGFRVPGNY-------VKGIACGGRHSAVITDAGALLTFGWGLYG 330
            D               G +VP          V  + CG + S  +T +GA+ T+G G Y 
Sbjct: 4183 D---------------GCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4227

Query: 331  QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            + G GS D    P  V  L G ++  +A G  H +C + DG+VY +G N  GQLG G   
Sbjct: 4228 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTN 4287

Query: 391  AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
            A   PRL+ A  L+      V+CG+ HT           W  +K    G        +P+
Sbjct: 4288 AIQRPRLVAA--LQGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPA 4329

Query: 451  QVTIE 455
            QV +E
Sbjct: 4330 QVPME 4334



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 165/400 (41%), Gaps = 60/400 (15%)

Query: 53   GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
              G   A +   K+  WG  +D  Q     G   ++P      +  ++V+ A G     A
Sbjct: 2948 AAGLESAATIRTKVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 3006

Query: 113  VTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG- 171
            VT  G+VY  G      +GR+   +S+GT        RQ + L+  V  +  V+  SGG 
Sbjct: 3007 VTVEGKVYACGE---ATNGRLGLGISSGTV----PIPRQITALSSYVVKK--VAVHSGGR 3057

Query: 172  --TSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIAT 225
              T+   DG+    G G++G         K    S  + D+     P L+      RI  
Sbjct: 3058 HATALTVDGKVFSWGEGDDG---------KLGHFSRMNCDK-----PRLIEALKTKRIRD 3103

Query: 226  VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS-----RIRMVSSPHPIPCIESSYGKDRS 280
            +A G  H+ AL+  G+++ WG G  G+LG G      + +MV        I+ + G   +
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3163

Query: 281  AALS---RGSVNSEGPG-------------------FRVPGNYVKGIACGGRHSAVITDA 318
              L+    G V S G G                    R+ G  V  I CG + S  +T +
Sbjct: 3164 QTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3223

Query: 319  GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            G + T+G G Y + G GS      P  V  L G +I  VA G  H + ++  G VYA+G 
Sbjct: 3224 GVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGD 3283

Query: 379  NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
            N  GQ G G       P L+    LE      V+CG+ H+
Sbjct: 3284 NDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHS 3321



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 120/268 (44%), Gaps = 42/268 (15%)

Query: 233  TLALSDIGQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAALSRG---- 286
            TL+    G ++GWG+   GQLG   G+++++     P PC   +    R   L  G    
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKV-----PTPC--EALATLRPVQLIGGEQTL 3997

Query: 287  -SVNSEGPGF-------------------------RVPGNYVKGIAC--GGRHSAVITDA 318
             +V ++G  +                          +   ++K +A   GG+H   ++  
Sbjct: 3998 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4057

Query: 319  GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            G + ++G    G+ G G+      P  + SL GI++  VAAG  H+ C+++ GD+Y +G 
Sbjct: 4058 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGK 4117

Query: 379  NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
             ++G+LG    + +  P+L++A     V   +   G   T  + DD  V+ WG   YG+L
Sbjct: 4118 GRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKL 4177

Query: 439  GLGDVIDRNIPSQV-TIEGCVPRNVACG 465
            G G      +P ++ ++ G     V CG
Sbjct: 4178 GRGGSDGCKVPMKIDSLTGLGVVKVECG 4205



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 92/217 (42%), Gaps = 38/217 (17%)

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
           SS DE   A P LV    G+++  VA  +G   TLA+++ GQVW WG G  G+LG G   
Sbjct: 587 SSEDE---AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG--- 640

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITD 317
                                     GS   + P    ++    V  + CG + S  +T 
Sbjct: 641 --------------------------GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTK 674

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
            G + ++G G   + G G+ +    P  +  L G ++  VAAG  H + ++ D +V+++G
Sbjct: 675 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
            N   Q         T P     P L+  H   ++CG
Sbjct: 735 SND--QCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 120/276 (43%), Gaps = 48/276 (17%)

Query: 205  DENLSAFPCLVTLNP---------GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG- 254
            +E+L+A P L + N          G  I   AAG      +    +V+ WG   + QLG 
Sbjct: 2917 EEDLAAVPFLASDNEEEEDEKGNSGSLIRKKAAGLESAATIR--TKVFVWGLNDKDQLGG 2974

Query: 255  -LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSA 313
              GS+I++            S+ +  SA                  N V+ +A G +   
Sbjct: 2975 LKGSKIKV-----------PSFSETLSAL-----------------NVVQ-VAGGSKSLF 3005

Query: 314  VITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVA--AGLWHTICISSD 370
             +T  G +   G    G+ G G +   +  P  +++L    ++ VA  +G  H   ++ D
Sbjct: 3006 AVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVD 3065

Query: 371  GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
            G V+++G    G+LG         PRL++A  L+    + ++CG+ H+A +   G+++ W
Sbjct: 3066 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEA--LKTKRIRDIACGSSHSAALTSSGELYTW 3123

Query: 431  GWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACG 465
            G  +YG+LG GD   +  P  V +  G     VACG
Sbjct: 3124 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3159



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 82/310 (26%), Positives = 121/310 (39%), Gaps = 47/310 (15%)

Query: 57   AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEG 116
            A A++   K+ +WG  DD G+    S  + + P          I   A G +H  A+T  
Sbjct: 3059 ATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 3117

Query: 117  GEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGT 176
            GE+YTWG  E    GR  G     T L   + +        QV+  S+ +++   T  G 
Sbjct: 3118 GELYTWGLGE---YGR-LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173

Query: 177  DGR-GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLA 235
                G G+ G   R              G E  +    +  LN G  +  +  G + +LA
Sbjct: 3174 VFSWGDGDFGKLGR-------------GGSEGCNIPQNIERLN-GQGVCQIECGAQFSLA 3219

Query: 236  LSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF 295
            L+  G VW WG G   +LG GS +  V  P  +                         G 
Sbjct: 3220 LTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQVVE------------------------GL 3254

Query: 296  RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
            R  G  +  +A G  H   +TD+G +  +G   +GQ G G+T     P  V  L G +I 
Sbjct: 3255 R--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKIT 3312

Query: 356  GVAAGLWHTI 365
             VA G  H++
Sbjct: 3313 RVACGSSHSV 3322



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 5/73 (6%)

Query: 53   GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
            G  F++A++ S  + TWG  D   LG     S  H   P          ++  A G  HC
Sbjct: 4205 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRRPRQVQGLQGKKVIAIATGSLHC 4261

Query: 111  VAVTEGGEVYTWG 123
            V  TE GEVYTWG
Sbjct: 4262 VCCTEDGEVYTWG 4274


>gi|93003290|tpd|FAA00228.1| TPA: zinc finger protein [Ciona intestinalis]
          Length = 2334

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/306 (28%), Positives = 131/306 (42%), Gaps = 80/306 (26%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++   V +GGRH +AL+  G V+ WG G EG+LG GSR                     +
Sbjct: 515 IKKLAVHSGGRHAMALTYDGHVYSWGDGEEGKLGHGSR---------------------A 553

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
            AL+   + +       P   ++ I+CG  HSA I  +G L T+G G+YG+ G G+    
Sbjct: 554 DALTPRKIET------FPEKCIRDISCGSSHSAAIGSSGTLYTWGHGMYGRLGHGNNHTL 607

Query: 341 LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           L P  V +L G Q+  VA G     T+C++ DG VY++G   FG+LG GG     +P+ +
Sbjct: 608 LKPKPVQALSGQQVVQVACGSRDAQTLCLTQDGLVYSWGDGDFGKLGRGGSDGCCVPKPV 667

Query: 399 DAPSLENV------------------------------------HSK------------- 409
           +  S ++V                                    H +             
Sbjct: 668 ERLSGQDVVKIECGAQFSLALSRCGLVWTWGKGDYFRLGHGSDQHVRRPQVVEGLREHKV 727

Query: 410 -SVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWW 467
             V+ GA H   + + G+VF WG N +GQ G G       P +V  +EG     +ACG  
Sbjct: 728 VDVAVGALHCLAVTEGGQVFAWGDNDHGQQGNGGTTVNRKPMKVQGLEGVKITKLACGSS 787

Query: 468 HTLLLA 473
           H++  A
Sbjct: 788 HSIAFA 793



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 93/300 (31%), Positives = 145/300 (48%), Gaps = 36/300 (12%)

Query: 210  AFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI-----RMV 262
            A P L+     V I  V+  AGG+H LALS+ G+V+ WG G +G+LG G+R      R++
Sbjct: 1480 AIPTLIESIQHVHITQVSVNAGGKHILALSNEGEVYSWGEGVDGKLGHGNRSSLDHPRII 1539

Query: 263  SSPHPIPCIESSYGKDRSAALSR---------------GSVNSEG---PGF--RVPGNYV 302
             S      ++ + G   SAA++                G  +SE    P     +  N V
Sbjct: 1540 ESLRGDLIVKVATGGSHSAAINATGGLYTWGKGRYGRLGHEDSEDQLKPKLVNALKDNLV 1599

Query: 303  KGIACGG--RHSAVITDA--GALLTFGWGL--YGQCGQGSTDDELSPNCVSSLLGIQIEG 356
              +ACG     +  IT+   G+ + + WG   YG+ G+G +D    P  + +L+G  I  
Sbjct: 1600 VDVACGNGDAQTLCITEGTGGSSVVWSWGDGDYGKLGRGGSDGCKVPAIIDTLMGKHITH 1659

Query: 357  VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR 416
            VA G   ++ +S  G VY +G   + +LG G D+    P+L++  SL  +    VS G+ 
Sbjct: 1660 VACGSQFSLALSKAGGVYTWGKGDYYRLGHGSDEHVRRPKLIE--SLRGMKVVEVSVGSL 1717

Query: 417  HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLAVP 475
            H     D+G V+ WG N  GQ+G G      IP  V  ++G    +V+CG  HT+  ++P
Sbjct: 1718 HCIAAVDNGDVYTWGDNDEGQIGDGTTQATQIPRLVAALQGHHISHVSCGSAHTVAWSLP 1777



 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 99/394 (25%), Positives = 147/394 (37%), Gaps = 64/394 (16%)

Query: 65  KLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGW 124
           K+  WG  D      +   KH + P          + +   G     AVT GG+VY  G 
Sbjct: 430 KVFVWGLNDKDQLGGLKGSKH-KTPVASKDLQRLKVTQVIGGSKSLFAVTMGGKVYACGE 488

Query: 125 KECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGT---DGR-- 179
                SGR+      G G       R +  L  Q  P  +++  SGG  +     DG   
Sbjct: 489 ST---SGRL------GLGPVTGSVSRLTQVLFPQ--PIKKLAVHSGGRHAMALTYDGHVY 537

Query: 180 --GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS 237
             G GEEG                  G    +  P  +   P   I  ++ G  H+ A+ 
Sbjct: 538 SWGDGEEGKL--------------GHGSRADALTPRKIETFPEKCIRDISCGSSHSAAIG 583

Query: 238 DIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIE------------------------- 272
             G ++ WG+G  G+LG G+   ++  P P+  +                          
Sbjct: 584 SSGTLYTWGHGMYGRLGHGNNHTLLK-PKPVQALSGQQVVQVACGSRDAQTLCLTQDGLV 642

Query: 273 SSYGKDRSAALSRGSVN---SEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
            S+G      L RG  +      P  R+ G  V  I CG + S  ++  G + T+G G Y
Sbjct: 643 YSWGDGDFGKLGRGGSDGCCVPKPVERLSGQDVVKIECGAQFSLALSRCGLVWTWGKGDY 702

Query: 330 GQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD 389
            + G GS      P  V  L   ++  VA G  H + ++  G V+A+G N  GQ G GG 
Sbjct: 703 FRLGHGSDQHVRRPQVVEGLREHKVVDVAVGALHCLAVTEGGQVFAWGDNDHGQQGNGGT 762

Query: 390 QAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
                P  +    LE V    ++CG+ H+   AD
Sbjct: 763 TVNRKP--MKVQGLEGVKITKLACGSSHSIAFAD 794



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 109/232 (46%), Gaps = 38/232 (16%)

Query: 240  GQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRV 297
            G ++GWG+   GQLG   G+++++     PIPC          AAL              
Sbjct: 1406 GSIFGWGHNHRGQLGGPEGAKVKI-----PIPC-------PSLAALK------------- 1440

Query: 298  PGNYVKGIACGGRHSA-VITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG 356
            P   V     GG  +   +T  G +   G+G  G+ G GS +    P  + S+  + I  
Sbjct: 1441 PIQLV-----GGEQTLFTVTGEGKVFATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQ 1495

Query: 357  VA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
            V+  AG  H + +S++G+VY++G    G+LG G   +   PR+++  SL       V+ G
Sbjct: 1496 VSVNAGGKHILALSNEGEVYSWGEGVDGKLGHGNRSSLDHPRIIE--SLRGDLIVKVATG 1553

Query: 415  ARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACG 465
              H+A I   G ++ WG  +YG+LG  D  D+  P  V  ++  +  +VACG
Sbjct: 1554 GSHSAAINATGGLYTWGKGRYGRLGHEDSEDQLKPKLVNALKDNLVVDVACG 1605



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 126/270 (46%), Gaps = 40/270 (14%)

Query: 212  PCLVTLNPGVRIATVAAGGRHTL-ALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPC 270
            P L  L P         GG  TL  ++  G+V+  GYG  G+LG+GS    V+ P  I  
Sbjct: 1434 PSLAALKP-----IQLVGGEQTLFTVTGEGKVFATGYGAGGRLGIGSN-ESVAIPTLIES 1487

Query: 271  IESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
            I+  +       +++ SVN+                 GG+H   +++ G + ++G G+ G
Sbjct: 1488 IQHVH-------ITQVSVNA-----------------GGKHILALSNEGEVYSWGEGVDG 1523

Query: 331  QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            + G G+      P  + SL G  I  VA G  H+  I++ G +Y +G  ++G+LG    +
Sbjct: 1524 KLGHGNRSSLDHPRIIESLRGDLIVKVATGGSHSAAINATGGLYTWGKGRYGRLGHEDSE 1583

Query: 391  AETLPRLLDAPSLENVHSKSVSCGA--RHTAVIAD----DGKVFCWGWNKYGQLGLGDVI 444
             +  P+L++A  L++     V+CG     T  I +       V+ WG   YG+LG G   
Sbjct: 1584 DQLKPKLVNA--LKDNLVVDVACGNGDAQTLCITEGTGGSSVVWSWGDGDYGKLGRGGSD 1641

Query: 445  DRNIPSQV-TIEGCVPRNVACGWWHTLLLA 473
               +P+ + T+ G    +VACG   +L L+
Sbjct: 1642 GCKVPAIIDTLMGKHITHVACGSQFSLALS 1671



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 89/360 (24%), Positives = 133/360 (36%), Gaps = 69/360 (19%)

Query: 58   MAISDSRKLITWGSTDD--LGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTE 115
            +A+S+  ++ +WG   D  LG    +S  H  I E         IVK A G +H  A+  
Sbjct: 1506 LALSNEGEVYSWGEGVDGKLGHGNRSSLDHPRIIESL---RGDLIVKVATGGSHSAAINA 1562

Query: 116  GGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSG 175
             G +YTWG       GR +G L      D+ +  +  + L + +            T   
Sbjct: 1563 TGGLYTWG------KGR-YGRLGHEDSEDQ-LKPKLVNALKDNLVVDVACGNGDAQTLCI 1614

Query: 176  TDGRG---------SGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATV 226
            T+G G          G+ G   R              G  +    P ++    G  I  V
Sbjct: 1615 TEGTGGSSVVWSWGDGDYGKLGR--------------GGSDGCKVPAIIDTLMGKHITHV 1660

Query: 227  AAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRG 286
            A G + +LALS  G V+ WG G   +LG GS    V  P  I  +               
Sbjct: 1661 ACGSQFSLALSKAGGVYTWGKGDYYRLGHGSD-EHVRRPKLIESLR-------------- 1705

Query: 287  SVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCV 346
                        G  V  ++ G  H     D G + T+G    GQ G G+T     P  V
Sbjct: 1706 ------------GMKVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIGDGTTQATQIPRLV 1753

Query: 347  SSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENV 406
            ++L G  I  V+ G  HT+  S   + +    N   +  TG    + +P  L+   L+N+
Sbjct: 1754 AALQGHHISHVSCGSAHTVAWSLPSESH----NMHKRRRTGAKLPDQIP--LEYNLLQNI 1807



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 67/154 (43%), Gaps = 6/154 (3%)

Query: 320 ALLTFGWGL--YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
           A   F WGL    Q G        +P     L  +++  V  G      ++  G VYA G
Sbjct: 428 AAKVFVWGLNDKDQLGGLKGSKHKTPVASKDLQRLKVTQVIGGSKSLFAVTMGGKVYACG 487

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQ 437
            +  G+LG G     ++ RL      + +   +V  G RH   +  DG V+ WG  + G+
Sbjct: 488 ESTSGRLGLGPVTG-SVSRLTQVLFPQPIKKLAVHSGGRHAMALTYDGHVYSWGDGEEGK 546

Query: 438 LGLGDVIDRNIPSQVTI--EGCVPRNVACGWWHT 469
           LG G   D   P ++    E C+ R+++CG  H+
Sbjct: 547 LGHGSRADALTPRKIETFPEKCI-RDISCGSSHS 579



 Score = 40.4 bits (93), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 5/73 (6%)

Query: 53   GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
            G  F++A+S +  + TWG  D   LG     S +H   P+         +V+ + G  HC
Sbjct: 1663 GSQFSLALSKAGGVYTWGKGDYYRLGHG---SDEHVRRPKLIESLRGMKVVEVSVGSLHC 1719

Query: 111  VAVTEGGEVYTWG 123
            +A  + G+VYTWG
Sbjct: 1720 IAAVDNGDVYTWG 1732


>gi|47216552|emb|CAG04730.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1036

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/245 (32%), Positives = 110/245 (44%), Gaps = 30/245 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  HTLAL+D GQV+ WG G  GQLGL +    V  P  I C+           
Sbjct: 86  IVAVSCGESHTLALNDKGQVFSWGLGSNGQLGLNNFEECVRVPRNIKCLSDVQ------- 138

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                              +  +ACG  HS  ++  G + ++G   +GQ G G     +S
Sbjct: 139 -------------------IAQVACGYWHSHALSKGGQVFSWGQNQFGQLGLGMHGSSIS 179

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
            P  + SL GI    ++AG  H+  I+  G V+ +G N+FGQLG    +    P LL   
Sbjct: 180 TPQIIQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGKNKFGQLGLNDTKDRWFPALLK-- 237

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
           SL +     VSCG  HTA +     VF +G   YGQLG         P +V  + G V  
Sbjct: 238 SLRSQRVIFVSCGEDHTAALTKLRGVFTFGAGGYGQLGHNCTNHEINPRKVFELMGNVVT 297

Query: 461 NVACG 465
            ++CG
Sbjct: 298 QISCG 302



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 79/268 (29%), Positives = 124/268 (46%), Gaps = 34/268 (12%)

Query: 205 DENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSS 264
           DE +   P       G R+  V  G +HT+ L D G V+  G    GQLG          
Sbjct: 18  DEEIVVEPRKCEFFHGKRVCDVGCGLKHTVFLLDDGTVYTCGCNDLGQLG---------- 67

Query: 265 PHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTF 324
                     + K R       +++++          +  ++CG  H+  + D G + ++
Sbjct: 68  ----------HEKSRKKPEHVVALDAQ---------IIVAVSCGESHTLALNDKGQVFSW 108

Query: 325 GWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQ 383
           G G  GQ G  + ++ +  P  +  L  +QI  VA G WH+  +S  G V+++G NQFGQ
Sbjct: 109 GLGSNGQLGLNNFEECVRVPRNIKCLSDVQIAQVACGYWHSHALSKGGQVFSWGQNQFGQ 168

Query: 384 LGTGGD-QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGD 442
           LG G    + + P+++   SL+ +    +S G  H+  I   G VF WG NK+GQLGL D
Sbjct: 169 LGLGMHGSSISTPQIIQ--SLQGIPFAQLSAGGAHSFAITLSGAVFGWGKNKFGQLGLND 226

Query: 443 VIDRNIPSQV-TIEGCVPRNVACGWWHT 469
             DR  P+ + ++       V+CG  HT
Sbjct: 227 TKDRWFPALLKSLRSQRVIFVSCGEDHT 254



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 54/156 (34%), Positives = 77/156 (49%), Gaps = 14/156 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDEL--SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   YGQ G G  D+E+   P       G ++  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVCDVGCGLKHTVFLLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   + +   +VSCG  HT  + D G+VF WG    GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEHVVALDAQII--VAVSCGESHTLALNDKGQVFSWGLGSNGQL 116

Query: 439 GLGDV-----IDRNIPSQVTIEGCVPRNVACGWWHT 469
           GL +      + RNI     ++      VACG+WH+
Sbjct: 117 GLNNFEECVRVPRNIKCLSDVQIA---QVACGYWHS 149



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 84/327 (25%), Positives = 129/327 (39%), Gaps = 71/327 (21%)

Query: 47  RDVCGGGCGF--AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           + VC  GCG    + + D   + T G  +DLGQ  +   K  + PE         IV  +
Sbjct: 34  KRVCDVGCGLKHTVFLLDDGTVYTCGC-NDLGQ--LGHEKSRKKPEHVVALDAQIIVAVS 90

Query: 105 AGWAHCVAVTEGGEVYTWG-----------WKECVPSGRVFGDLSTGTGLDKDVFERQSS 153
            G +H +A+ + G+V++WG           ++ECV   R    LS     D  + +    
Sbjct: 91  CGESHTLALNDKGQVFSWGLGSNGQLGLNNFEECVRVPRNIKCLS-----DVQIAQVACG 145

Query: 154 FLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPC 213
           +       +     S G    G    G G  GS             S S+        P 
Sbjct: 146 YWHSHALSKGGQVFSWGQNQFGQ--LGLGMHGS-------------SIST--------PQ 182

Query: 214 LVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES 273
           ++    G+  A ++AGG H+ A++  G V+GWG    GQLGL                  
Sbjct: 183 IIQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGKNKFGQLGLND---------------- 226

Query: 274 SYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCG 333
              KDR       S+ S+   F         ++CG  H+A +T    + TFG G YGQ G
Sbjct: 227 --TKDRWFPALLKSLRSQRVIF---------VSCGEDHTAALTKLRGVFTFGAGGYGQLG 275

Query: 334 QGSTDDELSPNCVSSLLGIQIEGVAAG 360
              T+ E++P  V  L+G  +  ++ G
Sbjct: 276 HNCTNHEINPRKVFELMGNVVTQISCG 302



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 47/100 (47%), Gaps = 9/100 (9%)

Query: 377 GGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVS---CGARHTAVIADDGKVFCWGWN 433
           G   +GQLG GG   E +   ++    E  H K V    CG +HT  + DDG V+  G N
Sbjct: 5   GNASYGQLGLGGIDEEIV---VEPRKCEFFHGKRVCDVGCGLKHTVFLLDDGTVYTCGCN 61

Query: 434 KYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
             GQLG      R  P  V  ++  +   V+CG  HTL L
Sbjct: 62  DLGQLGHEK--SRKKPEHVVALDAQIIVAVSCGESHTLAL 99


>gi|410349247|gb|JAA41227.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 129/255 (50%), Gaps = 29/255 (11%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           V+IA   + G H LAL+  G+V+ WG G  G+LG G  +     P   P + S++   ++
Sbjct: 496 VKIAA-HSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 549

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                             G +V  IACG  +SA IT  G L T+G G YG+ G GS++DE
Sbjct: 550 ------------------GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 591

Query: 341 LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
             P  V+ L G+++  VA  +G   T+ ++ +G V+++G   +G+LG GG      P+L+
Sbjct: 592 AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLI 651

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGC 457
           +   L+++    V CG++ +  +  DG+V+ WG     +LG G       P  +  ++G 
Sbjct: 652 E--KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGK 709

Query: 458 VPRNVACGWWHTLLL 472
              +VA G  H L L
Sbjct: 710 KVIDVAAGSTHCLAL 724



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 128/303 (42%), Gaps = 80/303 (26%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GGRH  AL+  G+V+ WG G +G+LG  SR+     P  I  +++   +D  
Sbjct: 3047 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRD-- 3103

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                    IACG  HSA +T +G L T+G G YG+ G G    +
Sbjct: 3104 ------------------------IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ 3139

Query: 341  LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V  LLG ++  VA G     T+ ++ +G V+++G   FG+LG GG +   +P+ +
Sbjct: 3140 LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNI 3199

Query: 399  DAPSLE------------------------------------NVHSKS------------ 410
            +  + +                                    +VH +             
Sbjct: 3200 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI 3259

Query: 411  --VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWW 467
              V+ GA H   + D G+V+ WG N +GQ G G       P+ V  +EG     VACG  
Sbjct: 3260 VHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3319

Query: 468  HTL 470
            H++
Sbjct: 3320 HSV 3322



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 144/365 (39%), Gaps = 82/365 (22%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V   +G  HC+A++  GEVY+WG  E         D   G G ++   +R    + E + 
Sbjct: 4042 VAVNSGGKHCLALSSEGEVYSWGEAE---------DGKLGHG-NRSPCDRPR--VIESLR 4089

Query: 161  PRSQVSRSSGGTSSG-TDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
                V  ++GG  S      G      K R   L    +E            P LV    
Sbjct: 4090 GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLK--------PKLVEALQ 4141

Query: 220  GVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
            G R+  +A  +G   TL L+D   VW WG G  G+LG G                   G 
Sbjct: 4142 GHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-------------------GS 4182

Query: 278  DRSAALSRGSVNSEGPGFRVPGNY-------VKGIACGGRHSAVITDAGALLTFGWGLYG 330
            D               G +VP          V  + CG + S  +T +GA+ T+G G Y 
Sbjct: 4183 D---------------GCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4227

Query: 331  QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            + G GS D    P  V  L G ++  +A G  H +C + DG+VY +G N  GQLG G   
Sbjct: 4228 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTN 4287

Query: 391  AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
            A   PRL+ A  L+      V+CG+ HT           W  +K    G        +P+
Sbjct: 4288 AIQRPRLVAA--LQGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPA 4329

Query: 451  QVTIE 455
            QV +E
Sbjct: 4330 QVPME 4334



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 165/400 (41%), Gaps = 60/400 (15%)

Query: 53   GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
              G   A +   K+  WG  +D  Q     G   ++P      +  ++V+ A G     A
Sbjct: 2948 AAGLESAATIRTKVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 3006

Query: 113  VTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG- 171
            VT  G+VY  G      +GR+   +S+GT        RQ + L+  V  +  V+  SGG 
Sbjct: 3007 VTVEGKVYACGE---ATNGRLGLGISSGTV----PIPRQITALSSYVVKK--VAVHSGGR 3057

Query: 172  --TSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIAT 225
              T+   DG+    G G++G         K    S  + D+     P L+      RI  
Sbjct: 3058 HATALTVDGKVFSWGEGDDG---------KLGHFSRMNCDK-----PRLIEALKTKRIRD 3103

Query: 226  VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS-----RIRMVSSPHPIPCIESSYGKDRS 280
            +A G  H+ AL+  G+++ WG G  G+LG G      + +MV        I+ + G   +
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3163

Query: 281  AALS---RGSVNSEGPG-------------------FRVPGNYVKGIACGGRHSAVITDA 318
              L+    G V S G G                    R+ G  V  I CG + S  +T +
Sbjct: 3164 QTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3223

Query: 319  GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            G + T+G G Y + G GS      P  V  L G +I  VA G  H + ++  G VYA+G 
Sbjct: 3224 GVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGD 3283

Query: 379  NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
            N  GQ G G       P L+    LE      V+CG+ H+
Sbjct: 3284 NDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHS 3321



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 120/268 (44%), Gaps = 42/268 (15%)

Query: 233  TLALSDIGQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAALSRG---- 286
            TL+    G ++GWG+   GQLG   G+++++     P PC   +    R   L  G    
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKV-----PTPC--EALATLRPVQLIGGEQTL 3997

Query: 287  -SVNSEGPGF-------------------------RVPGNYVKGIAC--GGRHSAVITDA 318
             +V ++G  +                          +   ++K +A   GG+H   ++  
Sbjct: 3998 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4057

Query: 319  GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            G + ++G    G+ G G+      P  + SL GI++  VAAG  H+ C+++ GD+Y +G 
Sbjct: 4058 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGK 4117

Query: 379  NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
             ++G+LG    + +  P+L++A     V   +   G   T  + DD  V+ WG   YG+L
Sbjct: 4118 GRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKL 4177

Query: 439  GLGDVIDRNIPSQV-TIEGCVPRNVACG 465
            G G      +P ++ ++ G     V CG
Sbjct: 4178 GRGGSDGCKVPMKIDSLTGLGVVKVECG 4205



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 92/217 (42%), Gaps = 38/217 (17%)

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
           SS DE   A P LV    G+++  VA  +G   TLA+++ GQVW WG G  G+LG G   
Sbjct: 587 SSEDE---AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG--- 640

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITD 317
                                     GS   + P    ++    V  + CG + S  +T 
Sbjct: 641 --------------------------GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTK 674

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
            G + ++G G   + G G+ +    P  +  L G ++  VAAG  H + ++ D +V+++G
Sbjct: 675 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
            N   Q         T P     P L+  H   ++CG
Sbjct: 735 SND--QCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 120/276 (43%), Gaps = 48/276 (17%)

Query: 205  DENLSAFPCLVTLNP---------GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG- 254
            +E+L+A P L + N          G  I   AAG      +    +V+ WG   + QLG 
Sbjct: 2917 EEDLAAVPFLASDNEEEEDEKGNSGSLIRKKAAGLESAATIR--TKVFVWGLNDKDQLGG 2974

Query: 255  -LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSA 313
              GS+I++            S+ +  SA                  N V+ +A G +   
Sbjct: 2975 LKGSKIKV-----------PSFSETLSAL-----------------NVVQ-VAGGSKSLF 3005

Query: 314  VITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVA--AGLWHTICISSD 370
             +T  G +   G    G+ G G +   +  P  +++L    ++ VA  +G  H   ++ D
Sbjct: 3006 AVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVD 3065

Query: 371  GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
            G V+++G    G+LG         PRL++A  L+    + ++CG+ H+A +   G+++ W
Sbjct: 3066 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEA--LKTKRIRDIACGSSHSAALTSSGELYTW 3123

Query: 431  GWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACG 465
            G  +YG+LG GD   +  P  V +  G     VACG
Sbjct: 3124 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3159



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 82/310 (26%), Positives = 121/310 (39%), Gaps = 47/310 (15%)

Query: 57   AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEG 116
            A A++   K+ +WG  DD G+    S  + + P          I   A G +H  A+T  
Sbjct: 3059 ATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 3117

Query: 117  GEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGT 176
            GE+YTWG  E    GR  G     T L   + +        QV+  S+ +++   T  G 
Sbjct: 3118 GELYTWGLGE---YGR-LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173

Query: 177  DGR-GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLA 235
                G G+ G   R              G E  +    +  LN G  +  +  G + +LA
Sbjct: 3174 VFSWGDGDFGKLGR-------------GGSEGCNIPQNIERLN-GQGVCQIECGAQFSLA 3219

Query: 236  LSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF 295
            L+  G VW WG G   +LG GS +  V  P  +                         G 
Sbjct: 3220 LTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQVVE------------------------GL 3254

Query: 296  RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
            R  G  +  +A G  H   +TD+G +  +G   +GQ G G+T     P  V  L G +I 
Sbjct: 3255 R--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKIT 3312

Query: 356  GVAAGLWHTI 365
             VA G  H++
Sbjct: 3313 RVACGSSHSV 3322



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 5/73 (6%)

Query: 53   GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
            G  F++A++ S  + TWG  D   LG     S  H   P          ++  A G  HC
Sbjct: 4205 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRRPRQVQGLQGKKVIAIATGSLHC 4261

Query: 111  VAVTEGGEVYTWG 123
            V  TE GEVYTWG
Sbjct: 4262 VCCTEDGEVYTWG 4274


>gi|410223232|gb|JAA08835.1| hect domain and RLD 2 [Pan troglodytes]
 gi|410304314|gb|JAA30757.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 129/255 (50%), Gaps = 29/255 (11%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           V+IA   + G H LAL+  G+V+ WG G  G+LG G  +     P   P + S++   ++
Sbjct: 496 VKIAA-HSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 549

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                             G +V  IACG  +SA IT  G L T+G G YG+ G GS++DE
Sbjct: 550 ------------------GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 591

Query: 341 LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
             P  V+ L G+++  VA  +G   T+ ++ +G V+++G   +G+LG GG      P+L+
Sbjct: 592 AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLI 651

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGC 457
           +   L+++    V CG++ +  +  DG+V+ WG     +LG G       P  +  ++G 
Sbjct: 652 E--KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGK 709

Query: 458 VPRNVACGWWHTLLL 472
              +VA G  H L L
Sbjct: 710 KVIDVAAGSTHCLAL 724



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 128/303 (42%), Gaps = 80/303 (26%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GGRH  AL+  G+V+ WG G +G+LG  SR+     P  I  +++   +D  
Sbjct: 3047 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRD-- 3103

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                    IACG  HSA +T +G L T+G G YG+ G G    +
Sbjct: 3104 ------------------------IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ 3139

Query: 341  LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V  LLG ++  VA G     T+ ++ +G V+++G   FG+LG GG +   +P+ +
Sbjct: 3140 LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNI 3199

Query: 399  DAPSLE------------------------------------NVHSKS------------ 410
            +  + +                                    +VH +             
Sbjct: 3200 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI 3259

Query: 411  --VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWW 467
              V+ GA H   + D G+V+ WG N +GQ G G       P+ V  +EG     VACG  
Sbjct: 3260 VHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3319

Query: 468  HTL 470
            H++
Sbjct: 3320 HSV 3322



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 144/365 (39%), Gaps = 82/365 (22%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V   +G  HC+A++  GEVY+WG  E         D   G G ++   +R    + E + 
Sbjct: 4042 VAVNSGGKHCLALSSEGEVYSWGEAE---------DGKLGHG-NRSPCDRPR--VIESLR 4089

Query: 161  PRSQVSRSSGGTSSG-TDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
                V  ++GG  S      G      K R   L    +E            P LV    
Sbjct: 4090 GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLK--------PKLVEALQ 4141

Query: 220  GVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
            G R+  +A  +G   TL L+D   VW WG G  G+LG G                   G 
Sbjct: 4142 GHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-------------------GS 4182

Query: 278  DRSAALSRGSVNSEGPGFRVPGNY-------VKGIACGGRHSAVITDAGALLTFGWGLYG 330
            D               G +VP          V  + CG + S  +T +GA+ T+G G Y 
Sbjct: 4183 D---------------GCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4227

Query: 331  QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            + G GS D    P  V  L G ++  +A G  H +C + DG+VY +G N  GQLG G   
Sbjct: 4228 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTN 4287

Query: 391  AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
            A   PRL+ A  L+      V+CG+ HT           W  +K    G        +P+
Sbjct: 4288 AIQRPRLVAA--LQGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPA 4329

Query: 451  QVTIE 455
            QV +E
Sbjct: 4330 QVPME 4334



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 165/400 (41%), Gaps = 60/400 (15%)

Query: 53   GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
              G   A +   K+  WG  +D  Q     G   ++P      +  ++V+ A G     A
Sbjct: 2948 AAGLESAATIRTKVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 3006

Query: 113  VTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG- 171
            VT  G+VY  G      +GR+   +S+GT        RQ + L+  V  +  V+  SGG 
Sbjct: 3007 VTVEGKVYACGE---ATNGRLGLGISSGTV----PIPRQITALSSYVVKK--VAVHSGGR 3057

Query: 172  --TSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIAT 225
              T+   DG+    G G++G         K    S  + D+     P L+      RI  
Sbjct: 3058 HATALTVDGKVFSWGEGDDG---------KLGHFSRMNCDK-----PRLIEALKTKRIRD 3103

Query: 226  VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS-----RIRMVSSPHPIPCIESSYGKDRS 280
            +A G  H+ AL+  G+++ WG G  G+LG G      + +MV        I+ + G   +
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3163

Query: 281  AALS---RGSVNSEGPG-------------------FRVPGNYVKGIACGGRHSAVITDA 318
              L+    G V S G G                    R+ G  V  I CG + S  +T +
Sbjct: 3164 QTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3223

Query: 319  GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            G + T+G G Y + G GS      P  V  L G +I  VA G  H + ++  G VYA+G 
Sbjct: 3224 GVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGD 3283

Query: 379  NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
            N  GQ G G       P L+    LE      V+CG+ H+
Sbjct: 3284 NDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHS 3321



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 120/268 (44%), Gaps = 42/268 (15%)

Query: 233  TLALSDIGQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAALSRG---- 286
            TL+    G ++GWG+   GQLG   G+++++     P PC   +    R   L  G    
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKV-----PTPC--EALATLRPVQLIGGEQTL 3997

Query: 287  -SVNSEGPGF-------------------------RVPGNYVKGIAC--GGRHSAVITDA 318
             +V ++G  +                          +   ++K +A   GG+H   ++  
Sbjct: 3998 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4057

Query: 319  GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            G + ++G    G+ G G+      P  + SL GI++  VAAG  H+ C+++ GD+Y +G 
Sbjct: 4058 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGK 4117

Query: 379  NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
             ++G+LG    + +  P+L++A     V   +   G   T  + DD  V+ WG   YG+L
Sbjct: 4118 GRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKL 4177

Query: 439  GLGDVIDRNIPSQV-TIEGCVPRNVACG 465
            G G      +P ++ ++ G     V CG
Sbjct: 4178 GRGGSDGCKVPMKIDSLTGLGVVKVECG 4205



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 92/217 (42%), Gaps = 38/217 (17%)

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
           SS DE   A P LV    G+++  VA  +G   TLA+++ GQVW WG G  G+LG G   
Sbjct: 587 SSEDE---AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG--- 640

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITD 317
                                     GS   + P    ++    V  + CG + S  +T 
Sbjct: 641 --------------------------GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTK 674

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
            G + ++G G   + G G+ +    P  +  L G ++  VAAG  H + ++ D +V+++G
Sbjct: 675 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
            N   Q         T P     P L+  H   ++CG
Sbjct: 735 SND--QCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 120/276 (43%), Gaps = 48/276 (17%)

Query: 205  DENLSAFPCLVTLNP---------GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG- 254
            +E+L+A P L + N          G  I   AAG      +    +V+ WG   + QLG 
Sbjct: 2917 EEDLAAVPFLASDNEEEEDEKGNSGSLIRKKAAGLESAATIR--TKVFVWGLNDKDQLGG 2974

Query: 255  -LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSA 313
              GS+I++            S+ +  SA                  N V+ +A G +   
Sbjct: 2975 LKGSKIKV-----------PSFSETLSAL-----------------NVVQ-VAGGSKSLF 3005

Query: 314  VITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVA--AGLWHTICISSD 370
             +T  G +   G    G+ G G +   +  P  +++L    ++ VA  +G  H   ++ D
Sbjct: 3006 AVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVD 3065

Query: 371  GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
            G V+++G    G+LG         PRL++A  L+    + ++CG+ H+A +   G+++ W
Sbjct: 3066 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEA--LKTKRIRDIACGSSHSAALTSSGELYTW 3123

Query: 431  GWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACG 465
            G  +YG+LG GD   +  P  V +  G     VACG
Sbjct: 3124 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3159



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 82/310 (26%), Positives = 121/310 (39%), Gaps = 47/310 (15%)

Query: 57   AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEG 116
            A A++   K+ +WG  DD G+    S  + + P          I   A G +H  A+T  
Sbjct: 3059 ATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 3117

Query: 117  GEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGT 176
            GE+YTWG  E    GR  G     T L   + +        QV+  S+ +++   T  G 
Sbjct: 3118 GELYTWGLGE---YGR-LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173

Query: 177  DGR-GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLA 235
                G G+ G   R              G E  +    +  LN G  +  +  G + +LA
Sbjct: 3174 VFSWGDGDFGKLGR-------------GGSEGCNIPQNIERLN-GQGVCQIECGAQFSLA 3219

Query: 236  LSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF 295
            L+  G VW WG G   +LG GS +  V  P  +                         G 
Sbjct: 3220 LTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQVVE------------------------GL 3254

Query: 296  RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
            R  G  +  +A G  H   +TD+G +  +G   +GQ G G+T     P  V  L G +I 
Sbjct: 3255 R--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKIT 3312

Query: 356  GVAAGLWHTI 365
             VA G  H++
Sbjct: 3313 RVACGSSHSV 3322



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 5/73 (6%)

Query: 53   GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
            G  F++A++ S  + TWG  D   LG     S  H   P          ++  A G  HC
Sbjct: 4205 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRRPRQVQGLQGKKVIAIATGSLHC 4261

Query: 111  VAVTEGGEVYTWG 123
            V  TE GEVYTWG
Sbjct: 4262 VCCTEDGEVYTWG 4274


>gi|410223230|gb|JAA08834.1| hect domain and RLD 2 [Pan troglodytes]
 gi|410304312|gb|JAA30756.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 129/255 (50%), Gaps = 29/255 (11%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           V+IA   + G H LAL+  G+V+ WG G  G+LG G  +     P   P + S++   ++
Sbjct: 496 VKIAA-HSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 549

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                             G +V  IACG  +SA IT  G L T+G G YG+ G GS++DE
Sbjct: 550 ------------------GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 591

Query: 341 LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
             P  V+ L G+++  VA  +G   T+ ++ +G V+++G   +G+LG GG      P+L+
Sbjct: 592 AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLI 651

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGC 457
           +   L+++    V CG++ +  +  DG+V+ WG     +LG G       P  +  ++G 
Sbjct: 652 E--KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGK 709

Query: 458 VPRNVACGWWHTLLL 472
              +VA G  H L L
Sbjct: 710 KVIDVAAGSTHCLAL 724



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 128/303 (42%), Gaps = 80/303 (26%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GGRH  AL+  G+V+ WG G +G+LG  SR+     P  I  +++   +D  
Sbjct: 3047 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRD-- 3103

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                    IACG  HSA +T +G L T+G G YG+ G G    +
Sbjct: 3104 ------------------------IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ 3139

Query: 341  LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V  LLG ++  VA G     T+ ++ +G V+++G   FG+LG GG +   +P+ +
Sbjct: 3140 LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNI 3199

Query: 399  DAPSLE------------------------------------NVHSKS------------ 410
            +  + +                                    +VH +             
Sbjct: 3200 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI 3259

Query: 411  --VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWW 467
              V+ GA H   + D G+V+ WG N +GQ G G       P+ V  +EG     VACG  
Sbjct: 3260 VHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3319

Query: 468  HTL 470
            H++
Sbjct: 3320 HSV 3322



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 144/365 (39%), Gaps = 82/365 (22%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V   +G  HC+A++  GEVY+WG  E         D   G G ++   +R    + E + 
Sbjct: 4042 VAVNSGGKHCLALSSEGEVYSWGEAE---------DGKLGHG-NRSPCDRPR--VIESLR 4089

Query: 161  PRSQVSRSSGGTSSG-TDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
                V  ++GG  S      G      K R   L    +E            P LV    
Sbjct: 4090 GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLK--------PKLVEALQ 4141

Query: 220  GVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
            G R+  +A  +G   TL L+D   VW WG G  G+LG G                   G 
Sbjct: 4142 GHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-------------------GS 4182

Query: 278  DRSAALSRGSVNSEGPGFRVPGNY-------VKGIACGGRHSAVITDAGALLTFGWGLYG 330
            D               G +VP          V  + CG + S  +T +GA+ T+G G Y 
Sbjct: 4183 D---------------GCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4227

Query: 331  QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            + G GS D    P  V  L G ++  +A G  H +C + DG+VY +G N  GQLG G   
Sbjct: 4228 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTN 4287

Query: 391  AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
            A   PRL+ A  L+      V+CG+ HT           W  +K    G        +P+
Sbjct: 4288 AIQRPRLVAA--LQGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPA 4329

Query: 451  QVTIE 455
            QV +E
Sbjct: 4330 QVPME 4334



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 165/400 (41%), Gaps = 60/400 (15%)

Query: 53   GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
              G   A +   K+  WG  +D  Q     G   ++P      +  ++V+ A G     A
Sbjct: 2948 AAGLESAATIRTKVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 3006

Query: 113  VTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG- 171
            VT  G+VY  G      +GR+   +S+GT        RQ + L+  V  +  V+  SGG 
Sbjct: 3007 VTVEGKVYACGE---ATNGRLGLGISSGTV----PIPRQITALSSYVVKK--VAVHSGGR 3057

Query: 172  --TSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIAT 225
              T+   DG+    G G++G         K    S  + D+     P L+      RI  
Sbjct: 3058 HATALTVDGKVFSWGEGDDG---------KLGHFSRMNCDK-----PRLIEALKTKRIRD 3103

Query: 226  VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS-----RIRMVSSPHPIPCIESSYGKDRS 280
            +A G  H+ AL+  G+++ WG G  G+LG G      + +MV        I+ + G   +
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3163

Query: 281  AALS---RGSVNSEGPG-------------------FRVPGNYVKGIACGGRHSAVITDA 318
              L+    G V S G G                    R+ G  V  I CG + S  +T +
Sbjct: 3164 QTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3223

Query: 319  GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            G + T+G G Y + G GS      P  V  L G +I  VA G  H + ++  G VYA+G 
Sbjct: 3224 GVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGD 3283

Query: 379  NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
            N  GQ G G       P L+    LE      V+CG+ H+
Sbjct: 3284 NDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHS 3321



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 120/268 (44%), Gaps = 42/268 (15%)

Query: 233  TLALSDIGQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAALSRG---- 286
            TL+    G ++GWG+   GQLG   G+++++     P PC   +    R   L  G    
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKV-----PTPC--EALATLRPVQLIGGEQTL 3997

Query: 287  -SVNSEGPGF-------------------------RVPGNYVKGIAC--GGRHSAVITDA 318
             +V ++G  +                          +   ++K +A   GG+H   ++  
Sbjct: 3998 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4057

Query: 319  GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            G + ++G    G+ G G+      P  + SL GI++  VAAG  H+ C+++ GD+Y +G 
Sbjct: 4058 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGK 4117

Query: 379  NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
             ++G+LG    + +  P+L++A     V   +   G   T  + DD  V+ WG   YG+L
Sbjct: 4118 GRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKL 4177

Query: 439  GLGDVIDRNIPSQV-TIEGCVPRNVACG 465
            G G      +P ++ ++ G     V CG
Sbjct: 4178 GRGGSDGCKVPMKIDSLTGLGVVKVECG 4205



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 92/217 (42%), Gaps = 38/217 (17%)

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
           SS DE   A P LV    G+++  VA  +G   TLA+++ GQVW WG G  G+LG G   
Sbjct: 587 SSEDE---AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG--- 640

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITD 317
                                     GS   + P    ++    V  + CG + S  +T 
Sbjct: 641 --------------------------GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTK 674

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
            G + ++G G   + G G+ +    P  +  L G ++  VAAG  H + ++ D +V+++G
Sbjct: 675 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
            N   Q         T P     P L+  H   ++CG
Sbjct: 735 SND--QCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 120/276 (43%), Gaps = 48/276 (17%)

Query: 205  DENLSAFPCLVTLNP---------GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG- 254
            +E+L+A P L + N          G  I   AAG      +    +V+ WG   + QLG 
Sbjct: 2917 EEDLAAVPFLASDNEEEEDEKGNSGSLIRKKAAGLESAATIR--TKVFVWGLNDKDQLGG 2974

Query: 255  -LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSA 313
              GS+I++            S+ +  SA                  N V+ +A G +   
Sbjct: 2975 LKGSKIKV-----------PSFSETLSAL-----------------NVVQ-VAGGSKSLF 3005

Query: 314  VITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVA--AGLWHTICISSD 370
             +T  G +   G    G+ G G +   +  P  +++L    ++ VA  +G  H   ++ D
Sbjct: 3006 AVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVD 3065

Query: 371  GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
            G V+++G    G+LG         PRL++A  L+    + ++CG+ H+A +   G+++ W
Sbjct: 3066 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEA--LKTKRIRDIACGSSHSAALTSSGELYTW 3123

Query: 431  GWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACG 465
            G  +YG+LG GD   +  P  V +  G     VACG
Sbjct: 3124 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3159



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 82/310 (26%), Positives = 121/310 (39%), Gaps = 47/310 (15%)

Query: 57   AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEG 116
            A A++   K+ +WG  DD G+    S  + + P          I   A G +H  A+T  
Sbjct: 3059 ATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 3117

Query: 117  GEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGT 176
            GE+YTWG  E    GR  G     T L   + +        QV+  S+ +++   T  G 
Sbjct: 3118 GELYTWGLGE---YGR-LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173

Query: 177  DGR-GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLA 235
                G G+ G   R              G E  +    +  LN G  +  +  G + +LA
Sbjct: 3174 VFSWGDGDFGKLGR-------------GGSEGCNIPQNIERLN-GQGVCQIECGAQFSLA 3219

Query: 236  LSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF 295
            L+  G VW WG G   +LG GS +  V  P  +                         G 
Sbjct: 3220 LTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQVVE------------------------GL 3254

Query: 296  RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
            R  G  +  +A G  H   +TD+G +  +G   +GQ G G+T     P  V  L G +I 
Sbjct: 3255 R--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKIT 3312

Query: 356  GVAAGLWHTI 365
             VA G  H++
Sbjct: 3313 RVACGSSHSV 3322



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 5/73 (6%)

Query: 53   GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
            G  F++A++ S  + TWG  D   LG     S  H   P          ++  A G  HC
Sbjct: 4205 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRRPRQVQGLQGKKVIAIATGSLHC 4261

Query: 111  VAVTEGGEVYTWG 123
            V  TE GEVYTWG
Sbjct: 4262 VCCTEDGEVYTWG 4274


>gi|222631437|gb|EEE63569.1| hypothetical protein OsJ_18386 [Oryza sativa Japonica Group]
          Length = 1132

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 98/171 (57%), Gaps = 4/171 (2%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ I+CGGRH+ ++T  G + ++G    G+ G G   D   P  + +L  + IE VA G 
Sbjct: 358 VQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALANMNIELVACGE 417

Query: 362 WHTICISSDGDVYAFGG--NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
           +HT  ++  GD+Y +G   +  G LG G + +  +P+ ++ P LE +H  ++SCG  HTA
Sbjct: 418 YHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGP-LEGIHVSAISCGPWHTA 476

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
           ++   G++F +G   +G LG GD    ++P +V +++G      ACG WHT
Sbjct: 477 IVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHT 527



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 74/268 (27%), Positives = 120/268 (44%), Gaps = 42/268 (15%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G+ ++ ++ G  HT  ++  GQ++ +G G  G LG G R + +S P  +  ++       
Sbjct: 462 GIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDR-QSLSVPREVESLK------- 513

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDA------------GALLTFGWG 327
                         G R     V+  ACG  H+A + +             G + T+G G
Sbjct: 514 --------------GLRT----VRA-ACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDG 554

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG 387
             G+ G G  D  L P CV++L+      +A G   T+ +++ G VY  G   +GQLG  
Sbjct: 555 DKGRLGHGDKDTRLVPTCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGN- 613

Query: 388 GDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
             QA+ +  +     L     + +SCGA H AV+    +V+ WG    G+LG GD  DR+
Sbjct: 614 -PQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRS 672

Query: 448 IPSQV-TIEGCVPRNVACGWWHTLLLAV 474
            P+ V  ++    R V CG   T  + +
Sbjct: 673 SPTLVEALKDKQVRTVVCGINFTAAICI 700



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/268 (28%), Positives = 122/268 (45%), Gaps = 49/268 (18%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  ++ GGRH   ++  G+++ WG    G+LG G     V    P P +      D  A 
Sbjct: 358 VQNISCGGRHATLVTKQGEIYSWGEESGGRLGHG-----VDCDVPQPKL-----IDALAN 407

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTDDE 340
           ++                 ++ +ACG  H+  +T +G L T+G G    G  G G+    
Sbjct: 408 MN-----------------IELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSH 450

Query: 341 LSPNCVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLD 399
             P  V+  L GI +  ++ G WHT  ++S G ++ FG   FG LG G  Q+ ++PR ++
Sbjct: 451 WVPKRVNGPLEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVE 510

Query: 400 APSLENVHSKSVSCGARHTAVIAD------------DGKVFCWGWNKYGQLGLGDVIDRN 447
             SL+ + +   +CG  HTA + +             GK+F WG    G+LG GD   R 
Sbjct: 511 --SLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRL 568

Query: 448 IPSQVTIEGCVPRN---VACGWWHTLLL 472
           +P+   +   V  N   +ACG   T+ L
Sbjct: 569 VPT--CVAALVEPNFCQIACGHCMTVAL 594



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 74/142 (52%), Gaps = 6/142 (4%)

Query: 335 GSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL 394
           G   D L P  +   + + ++ ++ G  H   ++  G++Y++G    G+LG G D     
Sbjct: 339 GVNMDCLIPKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQ 398

Query: 395 PRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW--GWNKYGQLGLGDVIDRNIPSQV 452
           P+L+DA  L N++ + V+CG  HT  +   G ++ W  G +  G LG G+ +   +P +V
Sbjct: 399 PKLIDA--LANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRV 456

Query: 453 T--IEGCVPRNVACGWWHTLLL 472
              +EG     ++CG WHT ++
Sbjct: 457 NGPLEGIHVSAISCGPWHTAIV 478


>gi|440230900|ref|YP_007344693.1| RCC1 domain-containing protein, alpha-tubulin suppressor [Serratia
            marcescens FGI94]
 gi|440052605|gb|AGB82508.1| RCC1 domain-containing protein, alpha-tubulin suppressor [Serratia
            marcescens FGI94]
          Length = 1812

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 123/257 (47%), Gaps = 27/257 (10%)

Query: 212  PCLVTLNP--GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP 269
            P LV L      ++  VAAG  H L L D  ++W WG+ G+GQLG G+R   V+ P PI 
Sbjct: 1527 PVLVDLASLGSSKVTAVAAGRYHNLVLDDQSRLWAWGHNGDGQLGDGTRTN-VAYPLPI- 1584

Query: 270  CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
                              V+ E     + G+ V G+  G  HS ++ D G L  +G   Y
Sbjct: 1585 -----------------QVDLE----PLAGSTVTGVWAGDFHSIILDDLGRLWVWGKNKY 1623

Query: 330  GQCGQGSTDDELSPNCVS--SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG 387
            G+ G G+T  +  P  V    L G ++  V+AG  HT+ +   G ++A+G N  G+LG G
Sbjct: 1624 GELGDGTTTYQTRPVLVDLLPLNGRKVMAVSAGEHHTVALDEQGGLWAWGLNDSGRLGDG 1683

Query: 388  GDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
                   P  +D  SL+     ++S G  +T  + + G+++ WG N+ G LG G  I+++
Sbjct: 1684 STTDRHRPVQVDLTSLDGHKVVAISAGGWNTVALDELGRLWAWGPNESGLLGDGTTINQH 1743

Query: 448  IPSQVTIEGCVPRNVAC 464
             P QV +     R V  
Sbjct: 1744 RPVQVDLTPLNGRKVVA 1760



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 125/272 (45%), Gaps = 36/272 (13%)

Query: 212  PCLVTLNP--GVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHP 267
            P L  L P  G  + +++  +G   + A+ D G++W WGY   G LG G+ I        
Sbjct: 1471 PVLTDLTPLGGSTVVSISTGSGASRSQAIDDQGRLWAWGYNFAGALGDGTGI-------- 1522

Query: 268  IPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWG 327
                     ++R   +   S+ S         + V  +A G  H+ V+ D   L  +G  
Sbjct: 1523 --------DRNRPVLVDLASLGS---------SKVTAVAAGRYHNLVLDDQSRLWAWGHN 1565

Query: 328  LYGQCGQGSTDDELSPNCVS----SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQ 383
              GQ G G+  +   P  +      L G  + GV AG +H+I +   G ++ +G N++G+
Sbjct: 1566 GDGQLGDGTRTNVAYPLPIQVDLEPLAGSTVTGVWAGDFHSIILDDLGRLWVWGKNKYGE 1625

Query: 384  LGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDV 443
            LG G    +T P L+D   L      +VS G  HT  + + G ++ WG N  G+LG G  
Sbjct: 1626 LGDGTTTYQTRPVLVDLLPLNGRKVMAVSAGEHHTVALDEQGGLWAWGLNDSGRLGDGST 1685

Query: 444  IDRNIPSQV---TIEGCVPRNVACGWWHTLLL 472
             DR+ P QV   +++G     ++ G W+T+ L
Sbjct: 1686 TDRHRPVQVDLTSLDGHKVVAISAGGWNTVAL 1717



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 92/198 (46%), Gaps = 29/198 (14%)

Query: 212  PCLVTLNP--GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP 269
            P LV L P  G ++  V+AG  HT+AL + G +W WG    G+LG GS            
Sbjct: 1637 PVLVDLLPLNGRKVMAVSAGEHHTVALDEQGGLWAWGLNDSGRLGDGS------------ 1684

Query: 270  CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
                +  + R   +   S++         G+ V  I+ GG ++  + + G L  +G    
Sbjct: 1685 ----TTDRHRPVQVDLTSLD---------GHKVVAISAGGWNTVALDELGRLWAWGPNES 1731

Query: 330  GQCGQGSTDDELSPNCV--SSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG 387
            G  G G+T ++  P  V  + L G ++  V+AG ++   +   G+++A+G N +GQLG G
Sbjct: 1732 GLLGDGTTINQHRPVQVDLTPLNGRKVVAVSAGSFYFFVVDDRGELWAWGSNSYGQLGDG 1791

Query: 388  GDQAETLPRLLDAPSLEN 405
                   P  +D  ++ N
Sbjct: 1792 TKTRRLKPVRVDMSAMNN 1809


>gi|422294826|gb|EKU22126.1| hect domain and rld 4, partial [Nannochloropsis gaditana CCMP526]
          Length = 516

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 128/265 (48%), Gaps = 27/265 (10%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P  V+L   +R   V+ G +H LAL + G V  WG G  GQLG G  +   SS  P    
Sbjct: 161 PSRVSLGVPLRCLQVSCGRKHALALMEGGFVTSWGVGYFGQLGQGDNL---SSDRP---- 213

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
                        R   + + P  R+ G+ V  +ACGG+HSAV T   ++  FG+  YGQ
Sbjct: 214 -------------RLIHHLDPP--RLGGDRVVAVACGGQHSAVHTAGQSVFCFGFNRYGQ 258

Query: 332 CGQGSTDDELS---PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGG 388
            GQG   +++S   P  +S +   QI  +  G  HT  ++  G V+++G + FG+LG   
Sbjct: 259 VGQGQACNKISTPRPVNMSGIGSSQIRQLVCGRHHTSVLTDKGQVFSWGASSFGRLGL-P 317

Query: 389 DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNI 448
           D  + +    + P+       +++CG  H   +  DG+ + WG+   GQ GLG  +    
Sbjct: 318 DPKKIVGLPTEVPAFRCCPLAALACGDFHVLGLGVDGRAYAWGYGSEGQGGLGATLHLRT 377

Query: 449 PSQVT-IEGCVPRNVACGWWHTLLL 472
           P  V  +EG     +ACG W ++++
Sbjct: 378 PRPVEGLEGSRIAQIACGAWWSMVV 402



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 109/243 (44%), Gaps = 32/243 (13%)

Query: 204 GDENLSAFPCLVT-LNP----GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR 258
           GD   S  P L+  L+P    G R+  VA GG+H+   +    V+ +G+   GQ+G G  
Sbjct: 205 GDNLSSDRPRLIHHLDPPRLGGDRVVAVACGGQHSAVHTAGQSVFCFGFNRYGQVGQGQA 264

Query: 259 IRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDA 318
              +S+P P                    VN  G G     + ++ + CG  H++V+TD 
Sbjct: 265 CNKISTPRP--------------------VNMSGIG----SSQIRQLVCGRHHTSVLTDK 300

Query: 319 GALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
           G + ++G   +G+ G       +  P  V +     +  +A G +H + +  DG  YA+G
Sbjct: 301 GQVFSWGASSFGRLGLPDPKKIVGLPTEVPAFRCCPLAALACGDFHVLGLGVDGRAYAWG 360

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQ 437
               GQ G G       PR ++   LE      ++CGA  + V+ + G+++ WG+   G 
Sbjct: 361 YGSEGQGGLGATLHLRTPRPVEG--LEGSRIAQIACGAWWSMVVTEAGRLYTWGYGDGGW 418

Query: 438 LGL 440
           LGL
Sbjct: 419 LGL 421



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 88/358 (24%), Positives = 139/358 (38%), Gaps = 58/358 (16%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEP--FPLPTEASIVKAAAGWAHC 110
           G  F +A++       WG+ +  G++Y         PEP    L      ++ + G  H 
Sbjct: 134 GATFTIALTSRGVPYQWGTVN--GRAY---------PEPSRVSLGVPLRCLQVSCGRKHA 182

Query: 111 VAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSG 170
           +A+ EGG V +WG          FG L  G  L  D           ++     V+ + G
Sbjct: 183 LALMEGGFVTSWGVG-------YFGQLGQGDNLSSDRPRLIHHLDPPRLGGDRVVAVACG 235

Query: 171 GTSSG--TDGRGSGEEGSKRR-RISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVA 227
           G  S   T G+     G  R  ++   +   + S+    N+S            +I  + 
Sbjct: 236 GQHSAVHTAGQSVFCFGFNRYGQVGQGQACNKISTPRPVNMSGIG-------SSQIRQLV 288

Query: 228 AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGS 287
            G  HT  L+D GQV+ WG    G+LGL    ++V  P                      
Sbjct: 289 CGRHHTSVLTDKGQVFSWGASSFGRLGLPDPKKIVGLP---------------------- 326

Query: 288 VNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVS 347
             +E P FR     +  +ACG  H   +   G    +G+G  GQ G G+T    +P  V 
Sbjct: 327 --TEVPAFRC--CPLAALACGDFHVLGLGVDGRAYAWGYGSEGQGGLGATLHLRTPRPVE 382

Query: 348 SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLEN 405
            L G +I  +A G W ++ ++  G +Y +G    G LG   ++A  LP +   P +  
Sbjct: 383 GLEGSRIAQIACGAWWSMVVTEAGRLYTWGYGDGGWLGL--ERASKLPYVEPCPPVTK 438


>gi|397515765|ref|XP_003828114.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
           [Pan paniscus]
          Length = 4839

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 129/255 (50%), Gaps = 29/255 (11%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           V+IA   + G H LAL+  G+V+ WG G  G+LG G  +     P   P + S++   ++
Sbjct: 442 VKIAA-HSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 495

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                             G +V  IACG  +SA IT  G L T+G G YG+ G GS++DE
Sbjct: 496 ------------------GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 537

Query: 341 LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
             P  V+ L G+++  VA  +G   T+ ++ +G V+++G   +G+LG GG      P+L+
Sbjct: 538 AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLI 597

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGC 457
           +   L+++    V CG++ +  +  DG+V+ WG     +LG G       P  +  ++G 
Sbjct: 598 E--KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGK 655

Query: 458 VPRNVACGWWHTLLL 472
              +VA G  H L L
Sbjct: 656 KVIDVAAGSTHCLAL 670



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 128/303 (42%), Gaps = 80/303 (26%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GGRH  AL+  G+V+ WG G +G+LG  SR+     P  I  +++   +D  
Sbjct: 3052 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRD-- 3108

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                    IACG  HSA +T +G L T+G G YG+ G G    +
Sbjct: 3109 ------------------------IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ 3144

Query: 341  LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V  LLG ++  VA G     T+ ++ +G V+++G   FG+LG GG +   +P+ +
Sbjct: 3145 LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNI 3204

Query: 399  DAPSLE------------------------------------NVHSKS------------ 410
            +  + +                                    +VH +             
Sbjct: 3205 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI 3264

Query: 411  --VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWW 467
              V+ GA H   + D G+V+ WG N +GQ G G       P+ V  +EG     VACG  
Sbjct: 3265 VHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3324

Query: 468  HTL 470
            H++
Sbjct: 3325 HSV 3327



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 144/365 (39%), Gaps = 82/365 (22%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V   +G  HC+A++  GEVY+WG  E         D   G G ++   +R    + E + 
Sbjct: 4047 VAVNSGGKHCLALSSEGEVYSWGEAE---------DGKLGHG-NRSPCDRPR--VIESLR 4094

Query: 161  PRSQVSRSSGGTSSG-TDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
                V  ++GG  S      G      K R   L    +E            P LV    
Sbjct: 4095 GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLK--------PKLVEALQ 4146

Query: 220  GVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
            G R+  +A  +G   TL L+D   VW WG G  G+LG G                   G 
Sbjct: 4147 GHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-------------------GS 4187

Query: 278  DRSAALSRGSVNSEGPGFRVPGNY-------VKGIACGGRHSAVITDAGALLTFGWGLYG 330
            D               G +VP          V  + CG + S  +T +GA+ T+G G Y 
Sbjct: 4188 D---------------GCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4232

Query: 331  QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            + G GS D    P  V  L G ++  +A G  H +C + DG+VY +G N  GQLG G   
Sbjct: 4233 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTN 4292

Query: 391  AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
            A   PRL+ A  L+      V+CG+ HT           W  +K    G        +P+
Sbjct: 4293 AIQRPRLVAA--LQGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPA 4334

Query: 451  QVTIE 455
            QV +E
Sbjct: 4335 QVPME 4339



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 111/399 (27%), Positives = 165/399 (41%), Gaps = 60/399 (15%)

Query: 55   GFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVT 114
            G   A +   K+  WG  +D  Q     G   ++P      +  ++V+ A G     AVT
Sbjct: 2955 GLESAATIRTKVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT 3013

Query: 115  EGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG--- 171
              G+VY  G      +GR+   +S+GT        RQ + L+  V  +  V+  SGG   
Sbjct: 3014 VEGKVYACGE---ATNGRLGLGISSGTV----PIPRQITALSSYVVKK--VAVHSGGRHA 3064

Query: 172  TSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVA 227
            T+   DG+    G G++G         K    S  + D+     P L+      RI  +A
Sbjct: 3065 TALTVDGKVFSWGEGDDG---------KLGHFSRMNCDK-----PRLIEALKTKRIRDIA 3110

Query: 228  AGGRHTLALSDIGQVWGWGYGGEGQLGLGS-----RIRMVSSPHPIPCIESSYGKDRSAA 282
             G  H+ AL+  G+++ WG G  G+LG G      + +MV        I+ + G   +  
Sbjct: 3111 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 3170

Query: 283  LS---RGSVNSEGPG-------------------FRVPGNYVKGIACGGRHSAVITDAGA 320
            L+    G V S G G                    R+ G  V  I CG + S  +T +G 
Sbjct: 3171 LALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGV 3230

Query: 321  LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
            + T+G G Y + G GS      P  V  L G +I  VA G  H + ++  G VYA+G N 
Sbjct: 3231 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDND 3290

Query: 381  FGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
             GQ G G       P L+    LE      V+CG+ H+ 
Sbjct: 3291 HGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 3327



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 120/268 (44%), Gaps = 42/268 (15%)

Query: 233  TLALSDIGQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAALSRG---- 286
            TL+    G ++GWG+   GQLG   G+++++     P PC   +    R   L  G    
Sbjct: 3950 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKV-----PTPC--EALATLRPVQLIGGEQTL 4002

Query: 287  -SVNSEGPGF-------------------------RVPGNYVKGIAC--GGRHSAVITDA 318
             +V ++G  +                          +   ++K +A   GG+H   ++  
Sbjct: 4003 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4062

Query: 319  GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            G + ++G    G+ G G+      P  + SL GI++  VAAG  H+ C+++ GD+Y +G 
Sbjct: 4063 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGK 4122

Query: 379  NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
             ++G+LG    + +  P+L++A     V   +   G   T  + DD  V+ WG   YG+L
Sbjct: 4123 GRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKL 4182

Query: 439  GLGDVIDRNIPSQV-TIEGCVPRNVACG 465
            G G      +P ++ ++ G     V CG
Sbjct: 4183 GRGGSDGCKVPMKIDSLTGLGVVKVECG 4210



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 92/217 (42%), Gaps = 38/217 (17%)

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
           SS DE   A P LV    G+++  VA  +G   TLA+++ GQVW WG G  G+LG G   
Sbjct: 533 SSEDE---AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG--- 586

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITD 317
                                     GS   + P    ++    V  + CG + S  +T 
Sbjct: 587 --------------------------GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTK 620

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
            G + ++G G   + G G+ +    P  +  L G ++  VAAG  H + ++ D +V+++G
Sbjct: 621 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 680

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
            N   Q         T P     P L+  H   ++CG
Sbjct: 681 SND--QCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 715



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 120/276 (43%), Gaps = 48/276 (17%)

Query: 205  DENLSAFPCLVTLNP---------GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG- 254
            +E+L+A P L + N          G  I   AAG      +    +V+ WG   + QLG 
Sbjct: 2922 EEDLAAVPFLASDNEEEEDEKGNSGSLIRKKAAGLESAATIR--TKVFVWGLNDKDQLGG 2979

Query: 255  -LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSA 313
              GS+I++            S+ +  SA                  N V+ +A G +   
Sbjct: 2980 LKGSKIKV-----------PSFSETLSAL-----------------NVVQ-VAGGSKSLF 3010

Query: 314  VITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVA--AGLWHTICISSD 370
             +T  G +   G    G+ G G +   +  P  +++L    ++ VA  +G  H   ++ D
Sbjct: 3011 AVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVD 3070

Query: 371  GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
            G V+++G    G+LG         PRL++A  L+    + ++CG+ H+A +   G+++ W
Sbjct: 3071 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEA--LKTKRIRDIACGSSHSAALTSSGELYTW 3128

Query: 431  GWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACG 465
            G  +YG+LG GD   +  P  V +  G     VACG
Sbjct: 3129 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3164



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 5/73 (6%)

Query: 53   GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
            G  F++A++ S  + TWG  D   LG     S  H   P          ++  A G  HC
Sbjct: 4210 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRRPRQVQGLQGKKVIAIATGSLHC 4266

Query: 111  VAVTEGGEVYTWG 123
            V  TE GEVYTWG
Sbjct: 4267 VCCTEDGEVYTWG 4279


>gi|348583539|ref|XP_003477530.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Cavia
           porcellus]
          Length = 551

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/203 (34%), Positives = 112/203 (55%), Gaps = 7/203 (3%)

Query: 276 GKDRSAALSRGSVNSEGPGFRVPGNYVKGIAC----GGRHSAVITDAGALLTFGWGLYGQ 331
           G + S  L  G V S     R+     K IAC     G H  + T  G + ++G   YGQ
Sbjct: 71  GTNCSGCLGLGDVQSTLEPRRLDSLSDKKIACLSYGSGPHIVLATTEGEVFSWGHNAYGQ 130

Query: 332 CGQGSTDDELSPNCVSS-LLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            G G+ +  L P+ +S+ L   Q+  VA G +H++ ++SDG+V+A+G N  GQ+G+G   
Sbjct: 131 LGNGTINHGLVPSHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTA 190

Query: 391 AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
            + +PR +    L+N    +++CG   +  + D G+V+ WG+N  GQLGLG   ++  P 
Sbjct: 191 NQAIPRRVTG-CLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPC 249

Query: 451 QVT-IEGCVPRNVACGWWHTLLL 472
           +V  ++G   + VACG+ HTL+L
Sbjct: 250 RVAALQGIRVQRVACGYAHTLVL 272



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 120/251 (47%), Gaps = 31/251 (12%)

Query: 222 RIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           +IA ++ G G H +  +  G+V+ WG+   GQLG G+                       
Sbjct: 99  KIACLSYGSGPHIVLATTEGEVFSWGHNAYGQLGNGT----------------------- 135

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
             ++ G V S      +    V  +ACG  HS V+T  G +  +G+   GQ G GST ++
Sbjct: 136 --INHGLVPSH-ISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ 192

Query: 341 LSPNCVSSLLGIQIE-GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLD 399
             P  V+  L  ++   +A G   ++ +   G+VY +G N  GQLG G    +  P    
Sbjct: 193 AIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTP--CR 250

Query: 400 APSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE-GCV 458
             +L+ +  + V+CG  HT V+ D+G+V+ WG N YGQLG G+  +++ P+ V +E   +
Sbjct: 251 VAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRI 310

Query: 459 PRNVACGWWHT 469
               AC   HT
Sbjct: 311 IEIAACHSTHT 321



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 55/105 (52%), Gaps = 3/105 (2%)

Query: 370 DGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFC 429
           + +++  G N  G LG G  Q+   PR LD+ S + +   S   G  H  +   +G+VF 
Sbjct: 64  NDEIFVLGTNCSGCLGLGDVQSTLEPRRLDSLSDKKIACLSYGSGP-HIVLATTEGEVFS 122

Query: 430 WGWNKYGQLGLGDVIDRNIPSQVT--IEGCVPRNVACGWWHTLLL 472
           WG N YGQLG G +    +PS ++  +       VACG +H+L+L
Sbjct: 123 WGHNAYGQLGNGTINHGLVPSHISTNLSNKQVTEVACGSYHSLVL 167



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 90/217 (41%), Gaps = 45/217 (20%)

Query: 65  KLITWGSTDDLGQSYVTSGKHGEIPEPFPLP-TEASIVKAAAGWAHCVAVTEGGEVYTWG 123
           ++ +WG  +  GQ    +  HG +P       +   + + A G  H + +T  GEV+ WG
Sbjct: 119 EVFSWGH-NAYGQLGNGTINHGLVPSHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWG 177

Query: 124 WKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSS--------- 174
           +          G + +G+  ++ +  R +  L  +V     V+ + G   S         
Sbjct: 178 YNNS-------GQVGSGSTANQAIPRRVTGCLQNKVV----VNIACGQMCSMAVVDTGEV 226

Query: 175 ---GTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGR 231
              G +G G    GS                SG++     PC V    G+R+  VA G  
Sbjct: 227 YVWGYNGNGQLGLGS----------------SGNQ---PTPCRVAALQGIRVQRVACGYA 267

Query: 232 HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
           HTL L+D GQV+ WG    GQLG G++    S P P+
Sbjct: 268 HTLVLTDEGQVYAWGANSYGQLGTGNKSNQ-SYPTPV 303



 Score = 38.5 bits (88), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 58/143 (40%), Gaps = 37/143 (25%)

Query: 14  VFMWGY-----------LPGALPQRSP--ILSPLVVRLPLTVGSAWRDVCGGGCGFAMAI 60
           VF WGY              A+P+R    + + +VV +           CG  C  +MA+
Sbjct: 173 VFAWGYNNSGQVGSGSTANQAIPRRVTGCLQNKVVVNIA----------CGQMC--SMAV 220

Query: 61  SDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASI--VKAAAGWAHCVAVTEGGE 118
            D+ ++  WG     G   +  G  G  P P  +     I   + A G+AH + +T+ G+
Sbjct: 221 VDTGEVYVWGYN---GNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 277

Query: 119 VYTWGWKECVPSGRVFGDLSTGT 141
           VY WG          +G L TG 
Sbjct: 278 VYAWG-------ANSYGQLGTGN 293


>gi|301121999|ref|XP_002908726.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262099488|gb|EEY57540.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 2298

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 89/318 (27%), Positives = 143/318 (44%), Gaps = 67/318 (21%)

Query: 207 NLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR-------- 258
           +LS  P    ++ G   A    G  HT+ +S  G+V   GY   GQLG G+         
Sbjct: 448 HLSEIP---KMDSGSSQAHAYNGCEHTILVSTDGRVATCGYNYRGQLGHGNTTSESVPKI 504

Query: 259 --------IRMVSSP--HPIPCIES-------SYGKDRSAAL-SRGSVNSEGPGF--RVP 298
                   +R+VS    H +   E        ++G++    L    S++ + P F   + 
Sbjct: 505 IRSLENKIVRLVSCSYYHTVLACEDGNLQNLYTFGRNDYGQLGHNDSIDRKIPQFVEALS 564

Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG-- 356
              +  +ACG  H+ V+T +G    FG   YGQ G  + +++L+P        +Q+ G  
Sbjct: 565 DQQIVSVACGQYHTMVVTVSGKAFAFGKNDYGQLGIDTMENQLAP--------VQVRGGL 616

Query: 357 -------VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL------------PRL 397
                  +  G +HTI + S   ++AFG N +GQLG G   A +              RL
Sbjct: 617 ERQECLEIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRSNASSTSNLQLQQQRFSNARL 676

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC 457
           +D   LE      ++CG  HT  ++D+G ++ +G N +GQLG GD  +R  P    I+  
Sbjct: 677 ID--ELEGKDIVRIACGCYHTIAVSDNGVMYVFGRNNHGQLGTGDTTERVYP--FPIDDF 732

Query: 458 VPRN---VACGWWHTLLL 472
           V +    VA G++HT++L
Sbjct: 733 VGKRIALVAAGFYHTVVL 750



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/291 (28%), Positives = 121/291 (41%), Gaps = 45/291 (15%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES--------- 273
           I  + AG  HT+ L+  G+V+  GY   GQ G G   R VS    IP ++S         
Sbjct: 408 IIQIGAGNEHTVVLTADGKVFTCGYNDNGQCGQGGTAR-VSHLSEIPKMDSGSSQAHAYN 466

Query: 274 ---------------SYGKDRSAALSRGSVNSEG-PGF--RVPGNYVKGIACGGRHSAVI 315
                          + G +    L  G+  SE  P     +    V+ ++C   H+ + 
Sbjct: 467 GCEHTILVSTDGRVATCGYNYRGQLGHGNTTSESVPKIIRSLENKIVRLVSCSYYHTVLA 526

Query: 316 TDAGAL---LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGD 372
            + G L    TFG   YGQ G   + D   P  V +L   QI  VA G +HT+ ++  G 
Sbjct: 527 CEDGNLQNLYTFGRNDYGQLGHNDSIDRKIPQFVEALSDQQIVSVACGQYHTMVVTVSGK 586

Query: 373 VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGW 432
            +AFG N +GQLG    + +  P  +    LE      + CG  HT  +     +F +G 
Sbjct: 587 AFAFGKNDYGQLGIDTMENQLAPVQVRG-GLERQECLEIRCGYYHTIALCSGAHLFAFGR 645

Query: 433 NKYGQLGLG-----DVIDRNIPSQV--------TIEGCVPRNVACGWWHTL 470
           N YGQLGLG        +  +  Q          +EG     +ACG +HT+
Sbjct: 646 NDYGQLGLGRSNASSTSNLQLQQQRFSNARLIDELEGKDIVRIACGCYHTI 696



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 77/216 (35%), Positives = 106/216 (49%), Gaps = 21/216 (9%)

Query: 270 CIESSYGKDRSAALSRGSVNSEGPGFRVPG---NYVKGIACGGRHSAVITDAGALLTFGW 326
           C ++SYG+     L  G   S     R+       +  I  G  H+ V+T  G + T G+
Sbjct: 378 CGQNSYGE-----LGHGDTASRKSFERIQALQQKEIIQIGAGNEHTVVLTADGKVFTCGY 432

Query: 327 GLYGQCGQGSTD--DELS--PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFG 382
              GQCGQG T     LS  P   S   G        G  HTI +S+DG V   G N  G
Sbjct: 433 NDNGQCGQGGTARVSHLSEIPKMDS---GSSQAHAYNGCEHTILVSTDGRVATCGYNYRG 489

Query: 383 QLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKV---FCWGWNKYGQLG 439
           QLG G   +E++P+++   SLEN   + VSC   HT +  +DG +   + +G N YGQLG
Sbjct: 490 QLGHGNTTSESVPKII--RSLENKIVRLVSCSYYHTVLACEDGNLQNLYTFGRNDYGQLG 547

Query: 440 LGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLAV 474
             D IDR IP  V  +      +VACG +HT+++ V
Sbjct: 548 HNDSIDRKIPQFVEALSDQQIVSVACGQYHTMVVTV 583



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 65/150 (43%), Gaps = 29/150 (19%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
           +  G  HT+AL     ++ +G    GQLGLG                      RS A S 
Sbjct: 624 IRCGYYHTIALCSGAHLFAFGRNDYGQLGLG----------------------RSNASST 661

Query: 286 GSVNSEGPGF-------RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
            ++  +   F        + G  +  IACG  H+  ++D G +  FG   +GQ G G T 
Sbjct: 662 SNLQLQQQRFSNARLIDELEGKDIVRIACGCYHTIAVSDNGVMYVFGRNNHGQLGTGDTT 721

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICIS 368
           + + P  +   +G +I  VAAG +HT+ ++
Sbjct: 722 ERVYPFPIDDFVGKRIALVAAGFYHTVVLT 751


>gi|55727310|emb|CAH90411.1| hypothetical protein [Pongo abelii]
          Length = 975

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 91/308 (29%), Positives = 142/308 (46%), Gaps = 51/308 (16%)

Query: 84  KHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGL 143
           + G  PE      +  I+  A G +H +A+++ G++++WG      +G   G L   T  
Sbjct: 70  REGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG------AGSD-GQLGLMTTE 122

Query: 144 DKDVFERQSSFLTEQVSPRSQVSRSSGG---TSSGTDGRGSGEEGSKRRRISLAKQTAES 200
           D     R    L ++++ ++ +  S G     +  +DG+      +   ++ L K+    
Sbjct: 123 DSVAVPR----LIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 201 SSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR 260
           +S         P  V    G+ +A VAAGG H+ ALS  G V+GWG    GQLGL     
Sbjct: 179 AS---------PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE-- 227

Query: 261 MVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA 320
                           KDR +      + ++          V  I+CG  H+AV+T +G 
Sbjct: 228 ----------------KDRESPCHVKLLRTQK---------VVYISCGEEHTAVLTKSGG 262

Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFGGN 379
           + TFG G YGQ G  S +DE++P  V  L+G ++  +A G  HT+  + S G +YAFG  
Sbjct: 263 VFTFGAGSYGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 380 QFGQLGTG 387
             GQLGTG
Sbjct: 323 ARGQLGTG 330



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 119/255 (46%), Gaps = 38/255 (14%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  VA GG H++ L + G+V+  G   +GQLG    +R  + P  I  +   +       
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG---HVREGNKPEQIGALADQH------- 85

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                              +  +ACG  HS  ++D G L ++G G  GQ G  +T+D ++
Sbjct: 86  -------------------IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA 126

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD-QAETLPRLLDA 400
            P  +  L    I  V+ G WH + ++SDG  + +G N  GQLG G +  ++  P+    
Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQ--RV 184

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI---EGC 457
            SLE +    V+ G  H+  ++  G VF WG N  GQLGL D  DR  P  V +   +  
Sbjct: 185 RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKV 244

Query: 458 VPRNVACGWWHTLLL 472
           V   ++CG  HT +L
Sbjct: 245 V--YISCGEEHTAVL 257



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 160/400 (40%), Gaps = 72/400 (18%)

Query: 66  LITWGSTDDLGQSYVTSGKHGEIPEPFP--LPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
           ++ WG    LGQ  +++   G + EP      ++ S+ + A G  H V + E GEVYT G
Sbjct: 1   MLCWGYWS-LGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG 59

Query: 124 WKECVPSGRV--------FGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSG 175
                  G V         G L+    +     E  S  L++    R Q+   S G  +G
Sbjct: 60  LNTKGQLGHVREGNKPEQIGALADQHIIHVACGESHSLALSD----RGQLF--SWG--AG 111

Query: 176 TDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLA 235
           +DG+             L   T E S        A P L+       I  V+ G  H LA
Sbjct: 112 SDGQ-------------LGLMTTEDSV-------AVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 236 LSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF 295
           L+  GQ + WG    GQLGLG      +SP  +  +E                       
Sbjct: 152 LASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLE----------------------- 188

Query: 296 RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY--GQCGQGSTDDELSPNCVSSLLGIQ 353
              G  +  +A GG HS  ++ +GA+  FGWG+   GQ G     D  SP  V  L   +
Sbjct: 189 ---GIPLAQVAAGGAHSFALSLSGAV--FGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK 243

Query: 354 IEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSC 413
           +  ++ G  HT  ++  G V+ FG   +GQLG      E  PR      L       ++C
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVNPR--RVLELMGSEVTQIAC 301

Query: 414 GARHT-AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
           G +HT A +   G ++ +G    GQLG G   +   PS V
Sbjct: 302 GRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 341



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 92/369 (24%), Positives = 144/369 (39%), Gaps = 79/369 (21%)

Query: 39  PLTVGS-AWRDVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLP 95
           P  +G+ A + +    CG   ++A+SD  +L +WG+  D     +T+     +P      
Sbjct: 75  PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 96  TEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFL 155
            + +I++ + G  HC+A+   G+ +TWG           G L    GL K+         
Sbjct: 135 NQQTILQVSCGNWHCLALASDGQFFTWG-------KNSHGQL----GLGKE--------F 175

Query: 156 TEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLA-------KQTAESSSSGDENL 208
             Q SP  Q  RS  G        G    G+    +SL+          A      DE  
Sbjct: 176 PSQASP--QRVRSLEGIPLAQVAAG----GAHSFALSLSGAVFGWGMNNAGQLGLSDEKD 229

Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
              PC V L    ++  ++ G  HT  L+  G V+ +G G  GQLG  S   M    +P 
Sbjct: 230 RESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDS---MNDEVNPR 286

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHS-AVITDAGALLTFGWG 327
             +E                        + G+ V  IACG +H+ A +  +G +  FG G
Sbjct: 287 RVLE------------------------LMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLG 385
             GQ G G T +   P+ V             G W  H+  +S+  D + +  +   Q+ 
Sbjct: 323 ARGQLGTGHTCNVKCPSPVK------------GYWAAHSGQLSARADRFKY--HIVKQIF 368

Query: 386 TGGDQAETL 394
           +GGDQ   L
Sbjct: 369 SGGDQTFVL 377



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 62/124 (50%), Gaps = 10/124 (8%)

Query: 354 IEGVAAGLWHTICISSDGDVYAFGGNQFGQLG--TGGDQAETLPRLLDAPSLENVHSKSV 411
           ++ VA G  H++ +  DG+VY  G N  GQLG    G++ E +  L D       H   V
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHVREGNKPEQIGALADQ------HIIHV 89

Query: 412 SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR-NIPSQV-TIEGCVPRNVACGWWHT 469
           +CG  H+  ++D G++F WG    GQLGL    D   +P  +  +       V+CG WH 
Sbjct: 90  ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149

Query: 470 LLLA 473
           L LA
Sbjct: 150 LALA 153


>gi|296090337|emb|CBI40156.3| unnamed protein product [Vitis vinifera]
          Length = 905

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 60/153 (39%), Positives = 88/153 (57%), Gaps = 3/153 (1%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ IACGGRH+A++T  G + ++G    G+ G G   D   P  + +L  + IE VA G 
Sbjct: 307 VQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDVSHPKLIDALKNMNIELVACGE 366

Query: 362 WHTICISSDGDVYAFGG--NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
           +H+  ++  GD+Y +GG    FG LG G D +  +P+ L  PS E +H  S+SCG  HTA
Sbjct: 367 YHSCAVTLSGDLYTWGGGSYNFGLLGRGNDMSHWVPKRLIGPS-EGIHVSSISCGPWHTA 425

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
           V+   G++F +G   +G LG GD     IP +V
Sbjct: 426 VVTSAGQLFTFGDGTFGVLGHGDCRSVPIPREV 458



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 75/138 (54%), Gaps = 6/138 (4%)

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D   P  + S + + ++ +A G  H   ++  G+V+++G    G+LG G D   + P+L+
Sbjct: 292 DSFVPKPLESAVLLDVQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDVSHPKLI 351

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKY--GQLGLGDVIDRNIPSQVT--I 454
           DA  L+N++ + V+CG  H+  +   G ++ WG   Y  G LG G+ +   +P ++    
Sbjct: 352 DA--LKNMNIELVACGEYHSCAVTLSGDLYTWGGGSYNFGLLGRGNDMSHWVPKRLIGPS 409

Query: 455 EGCVPRNVACGWWHTLLL 472
           EG    +++CG WHT ++
Sbjct: 410 EGIHVSSISCGPWHTAVV 427



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 63/240 (26%), Positives = 103/240 (42%), Gaps = 41/240 (17%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  +A GGRH   ++  G+V+ WG    G+LG G     VS P  I  +++         
Sbjct: 307 VQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVD-SDVSHPKLIDALKNMN------- 358

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY--GQCGQGSTDDE 340
                              ++ +ACG  HS  +T +G L T+G G Y  G  G+G+    
Sbjct: 359 -------------------IELVACGEYHSCAVTLSGDLYTWGGGSYNFGLLGRGNDMSH 399

Query: 341 LSPN-CVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLD 399
             P   +    GI +  ++ G WHT  ++S G ++ FG   FG LG G  ++  +PR ++
Sbjct: 400 WVPKRLIGPSEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDCRSVPIPREVE 459

Query: 400 APSLENVHSKSV-------SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
             SL+ + ++ +        C  RH     + G VFC   +    L      + N P +V
Sbjct: 460 --SLKGLRTQLLFWETSQKYCLKRHNCY--NCGLVFCHSCSSKKSLKTSMAPNPNKPYRV 515



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 67/155 (43%), Gaps = 27/155 (17%)

Query: 210 AFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP 269
           + P L+     + I  VA G  H+ A++  G ++ WG GG    GL  R           
Sbjct: 346 SHPKLIDALKNMNIELVACGEYHSCAVTLSGDLYTWG-GGSYNFGLLGR----------- 393

Query: 270 CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
                 G D S  + +  +   GP     G +V  I+CG  H+AV+T AG L TFG G +
Sbjct: 394 ------GNDMSHWVPKRLI---GPS---EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 441

Query: 330 GQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           G  G G       P  V SL G++ + +    W T
Sbjct: 442 GVLGHGDCRSVPIPREVESLKGLRTQLL---FWET 473


>gi|115378347|ref|ZP_01465512.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|310825395|ref|YP_003957753.1| bnr repeat domain-containing protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|115364660|gb|EAU63730.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|309398467|gb|ADO75926.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 382

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 90/270 (33%), Positives = 125/270 (46%), Gaps = 43/270 (15%)

Query: 206 ENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSP 265
           E   + P L     G R+  ++AG  H+LA+   G VW WG    G    G+  R  + P
Sbjct: 18  ERPRSAPPLGRAGEGPRVP-LSAGDSHSLAVHADGSVWAWGASASGLREEGALSRRFA-P 75

Query: 266 HPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFG 325
            P+P +                              +  +A GG HS  +   G L T+G
Sbjct: 76  VPVPGLSD----------------------------IVSVAAGGAHSLAVRADGTLWTWG 107

Query: 326 WGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLG 385
              YGQ G G+T     P  V+ L G++   VA GL H++ + +DG V+A+G NQFGQLG
Sbjct: 108 GNPYGQLGDGTTTARALPVQVAGLSGVRA--VATGLGHSLALRADGTVWAWGLNQFGQLG 165

Query: 386 TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVID 445
            G       PR +  P L  V  +SV+ G  H+ V+ DD  V+ WG N YG+LG G    
Sbjct: 166 DGTTSQWLTPRPI--PGLSGV--RSVAAGGFHSLVVRDDDTVWAWGSNDYGELGDGSTSR 221

Query: 446 RNIPSQVTIEGCVPRNVAC---GWWHTLLL 472
           R +P    I G   RNVA    G +H+L +
Sbjct: 222 RAVPR--AIPGL--RNVASVAGGCYHSLAV 247



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 108/362 (29%), Positives = 153/362 (42%), Gaps = 57/362 (15%)

Query: 91  PFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFER 150
           P P+P  + IV  AAG AH +AV   G ++TWG       G  +G L  GT   +     
Sbjct: 75  PVPVPGLSDIVSVAAGGAHSLAVRADGTLWTWG-------GNPYGQLGDGTTTAR----- 122

Query: 151 QSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSA 210
               L  QV+  S V   + G       R  G   +    ++   Q  + ++S       
Sbjct: 123 ---ALPVQVAGLSGVRAVATGLGHSLALRADGTVWAW--GLNQFGQLGDGTTSQWLTPRP 177

Query: 211 FPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPC 270
            P L     GVR  +VAAGG H+L + D   VW WG    G+LG GS             
Sbjct: 178 IPGLS----GVR--SVAAGGFHSLVVRDDDTVWAWGSNDYGELGDGS------------- 218

Query: 271 IESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
                        SR +V    PG R     V  +A G  HS  +   G L  +G   YG
Sbjct: 219 ------------TSRRAVPRAIPGLR----NVASVAGGCYHSLAVHADGTLSAWGLNSYG 262

Query: 331 QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
           Q G G+  +  +P  V  L G++   VA   +H++ + ++G V+A+G N +G+ G G   
Sbjct: 263 QLGDGTFSNRATPRPVPGLSGVRC--VATSFFHSLALRAEGTVWAWGLNGYGEQGDGTAS 320

Query: 391 AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
            ++ P     P L  V   SV+ G  H+  +  +G V  WG N  GQLG G    R+ P 
Sbjct: 321 RQS-PTPRPVPGLSGV--LSVATGTFHSLAVNTNGTVSAWGHNGQGQLGDGTATHRSTPV 377

Query: 451 QV 452
            V
Sbjct: 378 TV 379



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 83/270 (30%), Positives = 119/270 (44%), Gaps = 39/270 (14%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
           G     A P  V    GVR   VA G  H+LAL   G VW WG    GQLG G+  + ++
Sbjct: 117 GTTTARALPVQVAGLSGVR--AVATGLGHSLALRADGTVWAWGLNQFGQLGDGTTSQWLT 174

Query: 264 SPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLT 323
            P PIP +                              V+ +A GG HS V+ D   +  
Sbjct: 175 -PRPIPGLSG----------------------------VRSVAAGGFHSLVVRDDDTVWA 205

Query: 324 FGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQ 383
           +G   YG+ G GST     P  +  L    +  VA G +H++ + +DG + A+G N +GQ
Sbjct: 206 WGSNDYGELGDGSTSRRAVPRAIPGLR--NVASVAGGCYHSLAVHADGTLSAWGLNSYGQ 263

Query: 384 LGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDV 443
           LG G       PR +  P L  V  + V+    H+  +  +G V+ WG N YG+ G G  
Sbjct: 264 LGDGTFSNRATPRPV--PGLSGV--RCVATSFFHSLALRAEGTVWAWGLNGYGEQGDG-T 318

Query: 444 IDRNIPSQVTIEGCV-PRNVACGWWHTLLL 472
             R  P+   + G     +VA G +H+L +
Sbjct: 319 ASRQSPTPRPVPGLSGVLSVATGTFHSLAV 348


>gi|325186780|emb|CCA21326.1| regulator of chromosome condensation (RCC1)like protein putative
           [Albugo laibachii Nc14]
          Length = 954

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 88/320 (27%), Positives = 143/320 (44%), Gaps = 55/320 (17%)

Query: 201 SSSGDENLSAFPCLV---TLNPGVR---IATVAAGGRHTLALSDIGQVWGWGYGGEGQLG 254
           S++   N+   P LV   TL   +    I  +A G +H++AL+  G+V+ WG G +G+LG
Sbjct: 270 STTEPTNMLQTPQLVKELTLEKALHRRPIIHIACGAKHSVALTSAGEVYSWGSGEDGRLG 329

Query: 255 LGS-------RIRMVSSPHPIPCIES---------------SYGKDRSAALSRGSVNSEG 292
            G        R  M    H I  +                 ++G+ R+  L  G      
Sbjct: 330 HGEMRDRNVPRKIMALLRHRIEYVSCGGSHTAVVSDQNLVFTFGRGRNGRLGLGDTKCHD 389

Query: 293 PGFRVP-----GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD-DELSPNCV 346
               VP        +  + CG   +  ++  G + ++G    GQCG G  D DELSP  +
Sbjct: 390 TPQEVPTWGFRKQRIIKVVCGWNFTIALSLEGRVFSWGKQSEGQCGLGFCDQDELSPCLI 449

Query: 347 SSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENV 406
             LL  +I  VA G  H++ ++S  +V ++G  ++GQLG G         ++  PS E++
Sbjct: 450 EKLLDNRIVDVACGYTHSLALTSQHEVLSWGLGEYGQLGRG---------IVYQPSPESI 500

Query: 407 ----------HSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEG 456
                     H + + CGA H+ + A    ++ WG N YG  GLG  ++R+IP +     
Sbjct: 501 DQSLFACEGGHPQRIYCGAFHSIITAGSKILYAWGLNSYGACGLGHTLNRDIPERNDFFA 560

Query: 457 CVPRNVA--CGWWHTLLLAV 474
            +  +V   CG  +T+ L V
Sbjct: 561 NIDTDVVLCCGHKYTIALEV 580



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 91/331 (27%), Positives = 124/331 (37%), Gaps = 84/331 (25%)

Query: 100 IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQV 159
           I+  A G  H VA+T  GEVY+WG  E        G L  G   D++V  +  + L  ++
Sbjct: 298 IIHIACGAKHSVALTSAGEVYSWGSGED-------GRLGHGEMRDRNVPRKIMALLRHRI 350

Query: 160 SPRS----QVSRSSGGTSSGTDGRGSG--------------EE----GSKRRRI------ 191
              S      +  S      T GRG                +E    G +++RI      
Sbjct: 351 EYVSCGGSHTAVVSDQNLVFTFGRGRNGRLGLGDTKCHDTPQEVPTWGFRKQRIIKVVCG 410

Query: 192 --------------SLAKQTAESSSSG---DENLSAFPCLVTLNPGVRIATVAAGGRHTL 234
                         S  KQ+      G    + LS  PCL+      RI  VA G  H+L
Sbjct: 411 WNFTIALSLEGRVFSWGKQSEGQCGLGFCDQDELS--PCLIEKLLDNRIVDVACGYTHSL 468

Query: 235 ALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPG 294
           AL+   +V  WG G  GQLG G    +V  P P   I+ S                    
Sbjct: 469 ALTSQHEVLSWGLGEYGQLGRG----IVYQPSP-ESIDQSL------------------- 504

Query: 295 FRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTDDELSPNCVSSLLGI 352
           F   G + + I CG  HS  I  AG+ + + WGL  YG CG G T +   P        I
Sbjct: 505 FACEGGHPQRIYCGAFHS--IITAGSKILYAWGLNSYGACGLGHTLNRDIPERNDFFANI 562

Query: 353 QIEGV-AAGLWHTICISSDGDVYAFGGNQFG 382
             + V   G  +TI +  D  V +   + FG
Sbjct: 563 DTDVVLCCGHKYTIALEVDK-VPSVSADSFG 592


>gi|95007393|emb|CAJ20613.1| uvb-resistance protein uvr8, putative [Toxoplasma gondii RH]
          Length = 918

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 128/273 (46%), Gaps = 9/273 (3%)

Query: 203 SGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMV 262
           +GD   ++ P LV    G  +  VA    HT+   D G  + WG    G+LGL      +
Sbjct: 47  TGDRRDASVPRLVKALHGKVVKAVACSQEHTVCCLDDGSAYAWGCALNGRLGLHGL--SI 104

Query: 263 SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVI----TDA 318
            S   +     + G       S  +V +      + G ++  +ACG  HSA +     D 
Sbjct: 105 PSSAGLGVFSPATGARPEPLASACAVCTPRVLESLCGYFIADVACGPYHSAFLGIYEQDR 164

Query: 319 GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            +L T G GL G+ G G  +D   P  V +L  + I  +A G  HT C++S G +Y +GG
Sbjct: 165 TSLFTCGLGLNGRLGHGDEEDRHLPTAVHALENVNITAIACGAHHTACVTSAGTLYTWGG 224

Query: 379 NQFGQLGTGGDQ-AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQ 437
             FG+LG G  + ++ LP+ +  P L N    SV+ G++H+A +  DG+++ WG  +   
Sbjct: 225 AAFGKLGLGSTRGSQLLPKHVSGP-LRNKAVVSVALGSQHSACVTTDGELYTWGQGRRLG 283

Query: 438 LGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
             +    D  +P +V  + G    +V CG  HT
Sbjct: 284 HEVQGESDEILPRRVEALLGLFVIHVVCGDAHT 316



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/183 (33%), Positives = 91/183 (49%), Gaps = 26/183 (14%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD-DELSPNCVS-SLLGIQIEGVAA 359
           +  IACG  H+A +T AG L T+G   +G+ G GST   +L P  VS  L    +  VA 
Sbjct: 200 ITAIACGAHHTACVTSAGTLYTWGGAAFGKLGLGSTRGSQLLPKHVSGPLRNKAVVSVAL 259

Query: 360 GLWHTICISSDGDVYAFG-GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
           G  H+ C+++DG++Y +G G + G     G+  E LPR ++A  L  +    V CG  HT
Sbjct: 260 GSQHSACVTTDGELYTWGQGRRLGH-EVQGESDEILPRRVEA--LLGLFVIHVVCGDAHT 316

Query: 419 AVIADDGKVFCWGWNKYGQLGLGD------------------VIDRNIPSQVTIEGCVPR 460
           A I ++G V+ WG ++   LG GD                  V+  +  S  T+  C P+
Sbjct: 317 ACIVENGNVWAWGTSRI--LGHGDPEVPPNRPACLRALNGKGVVQLSCASTFTVAFCDPQ 374

Query: 461 NVA 463
            V+
Sbjct: 375 RVS 377



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 84/195 (43%), Gaps = 32/195 (16%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           ++ GG   AV+  +G L  +G    GQ G G   D   P  V +L G  ++ VA    HT
Sbjct: 18  VSAGGMQMAVVAHSGELYMWGANSEGQLGTGDRRDASVPRLVKALHGKVVKAVACSQEHT 77

Query: 365 ICISSDGDVYAFGGNQFGQLG-----------------TGGDQAETL--------PRLLD 399
           +C   DG  YA+G    G+LG                   G + E L        PR+L+
Sbjct: 78  VCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLGVFSPATGARPEPLASACAVCTPRVLE 137

Query: 400 APSLENVHSKSVSCGARHTAVIA----DDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TI 454
             SL       V+CG  H+A +     D   +F  G    G+LG GD  DR++P+ V  +
Sbjct: 138 --SLCGYFIADVACGPYHSAFLGIYEQDRTSLFTCGLGLNGRLGHGDEEDRHLPTAVHAL 195

Query: 455 EGCVPRNVACGWWHT 469
           E      +ACG  HT
Sbjct: 196 ENVNITAIACGAHHT 210



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 72/162 (44%), Gaps = 34/162 (20%)

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  V +L  I  E V+AG      ++  G++Y +G N  GQLGTG  +  ++PRL+ A 
Sbjct: 3   SPRLVDALKNINSERVSAGGMQMAVVAHSGELYMWGANSEGQLGTGDRRDASVPRLVKA- 61

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI------- 454
            L     K+V+C   HT    DDG  + WG    G+LGL  +   +IPS   +       
Sbjct: 62  -LHGKVVKAVACSQEHTVCCLDDGSAYAWGCALNGRLGLHGL---SIPSSAGLGVFSPAT 117

Query: 455 -----------EGCVPR-----------NVACGWWHTLLLAV 474
                        C PR           +VACG +H+  L +
Sbjct: 118 GARPEPLASACAVCTPRVLESLCGYFIADVACGPYHSAFLGI 159



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 99/226 (43%), Gaps = 32/226 (14%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
           GDE     P  V     V I  +A G  HT  ++  G ++ WG    G+LGLGS      
Sbjct: 181 GDEEDRHLPTAVHALENVNITAIACGAHHTACVTSAGTLYTWGGAAFGKLGLGS------ 234

Query: 264 SPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLT 323
                          R + L    V+  GP   +    V  +A G +HSA +T  G L T
Sbjct: 235 --------------TRGSQLLPKHVS--GP---LRNKAVVSVALGSQHSACVTTDGELYT 275

Query: 324 FGWGL-YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFG 382
           +G G   G   QG +D E+ P  V +LLG+ +  V  G  HT CI  +G+V+A+G ++  
Sbjct: 276 WGQGRRLGHEVQGESD-EILPRRVEALLGLFVIHVVCGDAHTACIVENGNVWAWGTSRI- 333

Query: 383 QLGTGGDQA-ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKV 427
            LG G  +     P  L A + + V    +SC +  T    D  +V
Sbjct: 334 -LGHGDPEVPPNRPACLRALNGKGV--VQLSCASTFTVAFCDPQRV 376


>gi|395501386|ref|XP_003755076.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Sarcophilus harrisii]
          Length = 979

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/260 (33%), Positives = 121/260 (46%), Gaps = 34/260 (13%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGL---GSRIRM---VSSPHPIPCIESSYG 276
           I  V+ G  HTLAL+D GQV+ WG   +GQLGL      IR+   + S   I  ++ + G
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACG 145

Query: 277 KDRSAALSRGS------VNSEGP---GFRVP------------GNYVKGIACGGRHSAVI 315
              S ALS+GS       N  G    GF +             G     +A GG HS V+
Sbjct: 146 YYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVL 205

Query: 316 TDAGALLTFGWGL--YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDV 373
           T +GA+  FGWG   +GQ G    +D   PN + SL   +I  +  G  HT  ++ +G V
Sbjct: 206 TLSGAI--FGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263

Query: 374 YAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGW 432
           + FG   +GQLG      E  PR      L       ++CG +HT A +   G+++ +G 
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPR--KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGL 321

Query: 433 NKYGQLGLGDVIDRNIPSQV 452
              GQLG G   +R  P  V
Sbjct: 322 GGNGQLGTGSTSNRKSPFTV 341



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 131/294 (44%), Gaps = 34/294 (11%)

Query: 205 DENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSS 264
           DE +   P         ++  V  G RHT+ + D G V+  G    GQLG     +    
Sbjct: 18  DEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---HEKSRKK 74

Query: 265 PHPIPCIES------SYGKDRSAALS-RGSVNSEG---------PG----FRVPGNY--- 301
           P  +  +++      S G+  + AL+ +G V + G         PG     RVP N    
Sbjct: 75  PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSL 134

Query: 302 ----VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDELSPNCVSSLLGIQIEG 356
               +  IACG  HS  ++    + ++G   +GQ G G     + SP  + SLLGI    
Sbjct: 135 TDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQ 194

Query: 357 VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR 416
           VAAG  H+  ++  G ++ +G N+FGQLG   +    +P LL   SL +     + CG  
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLK--SLRSQKIVYICCGED 252

Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
           HTA +  +G VF +G   YGQLG         P +V  + G +   +ACG  HT
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  VQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLGT-GGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    ++CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPR--NIKSLTDIQIVQIACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VF WG NK+GQLGLG  + R    Q+  ++ G     VA G  H+ +L +
Sbjct: 152 LSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTL 207



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/160 (34%), Positives = 83/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      +  +++ V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDTDGQL 116

Query: 439 GLGDV-----IDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      +ACG++H+L L+
Sbjct: 117 GLPGTEEYIRVPRNIKSLTDIQIV---QIACGYYHSLALS 153



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 83/307 (27%), Positives = 129/307 (42%), Gaps = 54/307 (17%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D       + ++  +P      T+  IV+ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSS-FLTEQV--SP 161
            G+ H +A+++G EV++WG  +        G L  G  L     +RQSS  L + +   P
Sbjct: 144 CGYYHSLALSKGSEVFSWGQNK-------HGQLGLGFEL-----KRQSSPQLIKSLLGIP 191

Query: 162 RSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGV 221
            +QV  ++GG  S          G  R +              DEN    P L+      
Sbjct: 192 FTQV--AAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRFVPNLLKSLRSQ 242

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
           +I  +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +             
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV------------- 288

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                        F + G+ V  IACG +H SA +  +G + +FG G  GQ G GST + 
Sbjct: 289 -------------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNR 335

Query: 341 LSPNCVS 347
            SP  V 
Sbjct: 336 KSPFTVK 342



 Score = 42.7 bits (99), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 56/244 (22%), Positives = 96/244 (39%), Gaps = 59/244 (24%)

Query: 36  VRLPLTVGSAWR-DVCGGGCGF--AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPF 92
           +R+P  + S     +    CG+  ++A+S   ++ +WG             KHG++   F
Sbjct: 125 IRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQ-----------NKHGQLGLGF 173

Query: 93  PLPTEAS-----------IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGT 141
            L  ++S             + AAG AH   +T  G ++ WG  +       FG L    
Sbjct: 174 ELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNK-------FGQLGLND 226

Query: 142 GLDKDVFERQSSFLTEQV-------SPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLA 194
             D+ V     S  ++++          + +++  G  + G  G G              
Sbjct: 227 ENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYG-------------- 272

Query: 195 KQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLAL-SDIGQVWGWGYGGEGQL 253
            Q   +S+S + N    P  V    G  +  +A G +HT A     G+++ +G GG GQL
Sbjct: 273 -QLGHNSTSHEIN----PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQL 327

Query: 254 GLGS 257
           G GS
Sbjct: 328 GTGS 331


>gi|330837791|ref|YP_004412432.1| chromosome condensation regulator RCC1 [Sphaerochaeta coccoides DSM
           17374]
 gi|329749694|gb|AEC03050.1| regulator of chromosome condensation RCC1 [Sphaerochaeta coccoides
           DSM 17374]
          Length = 726

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 110/238 (46%), Gaps = 28/238 (11%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           VR+ +V+AG  HT+ L   G +W  G    GQLG+G      +   P+   +S+ G    
Sbjct: 335 VRVKSVSAGYSHTMILKTDGTLWATGRNNYGQLGVGDTTNRRT---PVQVWDSTDGS--- 388

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                           V    V  ++ G  H+ ++   G L   G+  +GQ G  +TD++
Sbjct: 389 ----------------VKMTDVAAVSAGSNHTMILKKDGTLWAMGYNYFGQLGDDTTDNK 432

Query: 341 LSPNCVSSLLG---IQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
            +P  V    G     ++ V+AG +HT  +  DG ++A G NQ GQLG G     + P  
Sbjct: 433 STPVQVKDDAGGFMTDVKTVSAGGYHTTILKEDGTLWATGSNQQGQLGVGNTTNRSTPVQ 492

Query: 398 LDAPSLEN---VHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
           + A +  N   +  K VS G  HT ++ +DG ++  G+N  GQLG G    R  P +V
Sbjct: 493 VKASTAANDFMIDVKEVSAGTYHTTILKEDGTLWATGYNSDGQLGDGTTTARTTPVRV 550



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 116/265 (43%), Gaps = 38/265 (14%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           + TV+AGG HT  L + G +W  G   +GQLG+G+     +   P+    S+   D    
Sbjct: 449 VKTVSAGGYHTTILKEDGTLWATGSNQQGQLGVGNTTNRST---PVQVKASTAAND---- 501

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                       F +    VK ++ G  H+ ++ + G L   G+   GQ G G+T    +
Sbjct: 502 ------------FMID---VKEVSAGTYHTTILKEDGTLWATGYNSDGQLGDGTTTARTT 546

Query: 343 PNCVSSL-----LGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
           P  V            +   +AG  +T+ + +D  ++A G N  GQLG G   A T P  
Sbjct: 547 PVRVKDTTDGSGFMTDVAAFSAGNQYTMIVKTDDTLWATGSNNAGQLGDGTVTARTTPVR 606

Query: 398 LDAPSLEN---VHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI 454
           + A +  N      K+VS G  HT ++ +D  ++  G N YGQLG      R  P QV  
Sbjct: 607 VKASTTPNDFMTDVKAVSAGYYHTLILKNDETLWATGQNTYGQLGDSTTTTRTTPVQVK- 665

Query: 455 EGCVPRN-------VACGWWHTLLL 472
               P +       V+ G +HT++L
Sbjct: 666 ASTTPNDFMTDVAAVSAGGYHTIIL 690



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 90/183 (49%), Gaps = 12/183 (6%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCV-----SSLLGIQIEG 356
           VK ++ G  H+ ++   G L   G   YGQ G G T +  +P  V      S+    +  
Sbjct: 337 VKSVSAGYSHTMILKTDGTLWATGRNNYGQLGVGDTTNRRTPVQVWDSTDGSVKMTDVAA 396

Query: 357 VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLP-RLLDAPSLENVHSKSVSCGA 415
           V+AG  HT+ +  DG ++A G N FGQLG      ++ P ++ D         K+VS G 
Sbjct: 397 VSAGSNHTMILKKDGTLWAMGYNYFGQLGDDTTDNKSTPVQVKDDAGGFMTDVKTVSAGG 456

Query: 416 RHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVP------RNVACGWWHT 469
            HT ++ +DG ++  G N+ GQLG+G+  +R+ P QV             + V+ G +HT
Sbjct: 457 YHTTILKEDGTLWATGSNQQGQLGVGNTTNRSTPVQVKASTAANDFMIDVKEVSAGTYHT 516

Query: 470 LLL 472
            +L
Sbjct: 517 TIL 519



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 106/243 (43%), Gaps = 33/243 (13%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           + +  V+AG  HT  L + G +W  GY  +GQLG G+     ++    P           
Sbjct: 504 IDVKEVSAGTYHTTILKEDGTLWATGYNSDGQLGDGT-----TTARTTPV---------- 548

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
               R    ++G GF      V   + G +++ ++     L   G    GQ G G+    
Sbjct: 549 ----RVKDTTDGSGFMTD---VAAFSAGNQYTMIVKTDDTLWATGSNNAGQLGDGTVTAR 601

Query: 341 LSPNCVSSL-----LGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLP 395
            +P  V +          ++ V+AG +HT+ + +D  ++A G N +GQLG       T P
Sbjct: 602 TTPVRVKASTTPNDFMTDVKAVSAGYYHTLILKNDETLWATGQNTYGQLGDSTTTTRTTP 661

Query: 396 RLLDAPSLEN---VHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG---LGDVIDRNIP 449
             + A +  N       +VS G  HT ++  DG ++  G N YGQLG    G V +++ P
Sbjct: 662 VQVKASTTPNDFMTDVAAVSAGGYHTIILKTDGTLWATGNNGYGQLGDGTSGTVNNKSTP 721

Query: 450 SQV 452
            QV
Sbjct: 722 VQV 724



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 72/130 (55%), Gaps = 7/130 (5%)

Query: 350 LGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLP-RLLDAP--SLENV 406
           + ++++ V+AG  HT+ + +DG ++A G N +GQLG G       P ++ D+   S++  
Sbjct: 333 VKVRVKSVSAGYSHTMILKTDGTLWATGRNNYGQLGVGDTTNRRTPVQVWDSTDGSVKMT 392

Query: 407 HSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEG----CVPRNV 462
              +VS G+ HT ++  DG ++  G+N +GQLG     +++ P QV  +        + V
Sbjct: 393 DVAAVSAGSNHTMILKKDGTLWAMGYNYFGQLGDDTTDNKSTPVQVKDDAGGFMTDVKTV 452

Query: 463 ACGWWHTLLL 472
           + G +HT +L
Sbjct: 453 SAGGYHTTIL 462



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 32/81 (39%), Positives = 48/81 (59%), Gaps = 7/81 (8%)

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIE 455
           ++AP+++ V  KSVS G  HT ++  DG ++  G N YGQLG+GD  +R  P QV  + +
Sbjct: 328 INAPAVK-VRVKSVSAGYSHTMILKTDGTLWATGRNNYGQLGVGDTTNRRTPVQVWDSTD 386

Query: 456 GCVPRN----VACGWWHTLLL 472
           G V       V+ G  HT++L
Sbjct: 387 GSVKMTDVAAVSAGSNHTMIL 407


>gi|298709028|emb|CBJ30978.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 498

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 127/286 (44%), Gaps = 39/286 (13%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
           GDE       LV +  G  +A VA G  HT  L D G V  +G    GQLGLG       
Sbjct: 59  GDEPDEMGDNLVAVPVGGTVAEVALGEDHTCMLLDSGNVVCFGKNDSGQLGLGDT----- 113

Query: 264 SPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLT 323
                    S+ G+    A   G     G G          +A G RH+  + D G +  
Sbjct: 114 ---------STRGQ---IAGDVGEAADLGAGLS-----AVAVALGCRHTCGLLDDGTVKC 156

Query: 324 FGWGLYGQCGQGSTDD------ELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
           FG+  YGQ GQG+T++      E+  +  +  L   +  VAAG  HT  +  DG V  +G
Sbjct: 157 FGYNNYGQLGQGTTENMGDDAGEMGDDLPAVSLDGTVSAVAAGCDHTCALMDDGTVMCWG 216

Query: 378 GNQFGQLGTG--GDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKY 435
            N  GQLGTG   D+ +     L A  L+   + +++ G  HT  + DD  + CWG N  
Sbjct: 217 RNTHGQLGTGDSDDRLDGNGLALVAVDLDGSVATAIAAGESHTCALLDDDSIKCWGLNSS 276

Query: 436 GQLGLGDVIDR---------NIPSQVTIEGCVPRNVACGWWHTLLL 472
           GQLG GD +DR         N+P+     G VP  + CG ++T  L
Sbjct: 277 GQLGQGDDLDRGDSPETLGANLPAIALGTGDVPTAIDCGSFYTCAL 322



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/240 (32%), Positives = 109/240 (45%), Gaps = 33/240 (13%)

Query: 217 LNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYG 276
           L  G+    VA G RHT  L D G V  +GY   GQLG G+   M              G
Sbjct: 129 LGAGLSAVAVALGCRHTCGLLDDGTVKCFGYNNYGQLGQGTTENM--------------G 174

Query: 277 KDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGS 336
            D       G +  + P   + G  V  +A G  H+  + D G ++ +G   +GQ G G 
Sbjct: 175 DD------AGEMGDDLPAVSLDGT-VSAVAAGCDHTCALMDDGTVMCWGRNTHGQLGTGD 227

Query: 337 TDDELSPNCVSSLLGIQIEG-----VAAGLWHTICISSDGDVYAFGGNQFGQLGTG---- 387
           +DD L  N + +L+ + ++G     +AAG  HT  +  D  +  +G N  GQLG G    
Sbjct: 228 SDDRLDGNGL-ALVAVDLDGSVATAIAAGESHTCALLDDDSIKCWGLNSSGQLGQGDDLD 286

Query: 388 -GDQAETLPRLLDAPSLENVH-SKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVID 445
            GD  ETL   L A +L       ++ CG+ +T  + DDG   C+G N  G+LG G   D
Sbjct: 287 RGDSPETLGANLPAIALGTGDVPTAIDCGSFYTCALLDDGSAKCFGANADGELGTGTTQD 346



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 89/342 (26%), Positives = 129/342 (37%), Gaps = 44/342 (12%)

Query: 62  DSRKLITWGSTDD----LGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGG 117
           DS  ++ +G  D     LG +       G++ E   L    S V  A G  H   + + G
Sbjct: 93  DSGNVVCFGKNDSGQLGLGDTSTRGQIAGDVGEAADLGAGLSAVAVALGCRHTCGLLDDG 152

Query: 118 EVYTWGWKECVPSGRVFGDLSTGT--GLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSG 175
            V  +G+         +G L  GT   +  D  E         VS    VS  + G    
Sbjct: 153 TVKCFGYNN-------YGQLGQGTTENMGDDAGEMGDDL--PAVSLDGTVSAVAAGCDHT 203

Query: 176 TDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIAT-VAAGGRHTL 234
                 G      R       T +S    D N  A   LV ++    +AT +AAG  HT 
Sbjct: 204 CALMDDGTVMCWGRNTHGQLGTGDSDDRLDGNGLA---LVAVDLDGSVATAIAAGESHTC 260

Query: 235 ALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPG 294
           AL D   +  WG    GQLG G  +    SP  +             A++ G+       
Sbjct: 261 ALLDDDSIKCWGLNSSGQLGQGDDLDRGDSPETLGA--------NLPAIALGT------- 305

Query: 295 FRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDD------ELSPNCVSS 348
               G+    I CG  ++  + D G+   FG    G+ G G+T D      E+  N +++
Sbjct: 306 ----GDVPTAIDCGSFYTCALLDDGSAKCFGANADGELGTGTTQDVGLLPTEMGDNLIAA 361

Query: 349 LLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            +G   + +AAG   T  I SD  V  +G    GQLG G D+
Sbjct: 362 AIGDTAQDIAAGGATTCAIVSDDSVICWGQGSSGQLGQGTDE 403



 Score = 43.9 bits (102), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 9/89 (10%)

Query: 365 ICISSDGDVYAFGGNQFGQLGTG------GDQAETL-PRLLDAPSLENVHSKSVSCGARH 417
           +C +       +G N++GQLG G      GD+ + +   L+  P    V    V+ G  H
Sbjct: 30  VCATIGSSAKCWGNNRWGQLGRGDNTTLIGDEPDEMGDNLVAVPVGGTV--AEVALGEDH 87

Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDR 446
           T ++ D G V C+G N  GQLGLGD   R
Sbjct: 88  TCMLLDSGNVVCFGKNDSGQLGLGDTSTR 116


>gi|115463633|ref|NP_001055416.1| Os05g0384800 [Oryza sativa Japonica Group]
 gi|113578967|dbj|BAF17330.1| Os05g0384800 [Oryza sativa Japonica Group]
          Length = 1086

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 98/171 (57%), Gaps = 4/171 (2%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ I+CGGRH+ ++T  G + ++G    G+ G G   D   P  + +L  + IE VA G 
Sbjct: 312 VQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALANMNIELVACGE 371

Query: 362 WHTICISSDGDVYAFGG--NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
           +HT  ++  GD+Y +G   +  G LG G + +  +P+ ++ P LE +H  ++SCG  HTA
Sbjct: 372 YHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGP-LEGIHVSAISCGPWHTA 430

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
           ++   G++F +G   +G LG GD    ++P +V +++G      ACG WHT
Sbjct: 431 IVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHT 481



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 74/268 (27%), Positives = 120/268 (44%), Gaps = 42/268 (15%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G+ ++ ++ G  HT  ++  GQ++ +G G  G LG G R + +S P  +  ++       
Sbjct: 416 GIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDR-QSLSVPREVESLK------- 467

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDA------------GALLTFGWG 327
                         G R     V+  ACG  H+A + +             G + T+G G
Sbjct: 468 --------------GLRT----VRA-ACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDG 508

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG 387
             G+ G G  D  L P CV++L+      +A G   T+ +++ G VY  G   +GQLG  
Sbjct: 509 DKGRLGHGDKDTRLVPTCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGN- 567

Query: 388 GDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
             QA+ +  +     L     + +SCGA H AV+    +V+ WG    G+LG GD  DR+
Sbjct: 568 -PQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRS 626

Query: 448 IPSQV-TIEGCVPRNVACGWWHTLLLAV 474
            P+ V  ++    R V CG   T  + +
Sbjct: 627 SPTLVEALKDKQVRTVVCGINFTAAICI 654



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 122/270 (45%), Gaps = 49/270 (18%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  ++ GGRH   ++  G+++ WG    G+LG G     V    P P +      D  A 
Sbjct: 312 VQNISCGGRHATLVTKQGEIYSWGEESGGRLGHG-----VDCDVPQPKL-----IDALAN 361

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTDDE 340
           ++                 ++ +ACG  H+  +T +G L T+G G    G  G G+    
Sbjct: 362 MN-----------------IELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSH 404

Query: 341 LSPNCVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLD 399
             P  V+  L GI +  ++ G WHT  ++S G ++ FG   FG LG G  Q+ ++PR ++
Sbjct: 405 WVPKRVNGPLEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVE 464

Query: 400 APSLENVHSKSVSCGARHTAVIAD------------DGKVFCWGWNKYGQLGLGDVIDRN 447
             SL+ + +   +CG  HTA + +             GK+F WG    G+LG GD   R 
Sbjct: 465 --SLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRL 522

Query: 448 IPSQVTIEGCVPRN---VACGWWHTLLLAV 474
           +P+   +   V  N   +ACG   T+ L  
Sbjct: 523 VPT--CVAALVEPNFCQIACGHCMTVALTT 550



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 74/142 (52%), Gaps = 6/142 (4%)

Query: 335 GSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL 394
           G   D L P  +   + + ++ ++ G  H   ++  G++Y++G    G+LG G D     
Sbjct: 293 GVNMDCLIPKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQ 352

Query: 395 PRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW--GWNKYGQLGLGDVIDRNIPSQV 452
           P+L+DA  L N++ + V+CG  HT  +   G ++ W  G +  G LG G+ +   +P +V
Sbjct: 353 PKLIDA--LANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRV 410

Query: 453 T--IEGCVPRNVACGWWHTLLL 472
              +EG     ++CG WHT ++
Sbjct: 411 NGPLEGIHVSAISCGPWHTAIV 432


>gi|442319170|ref|YP_007359191.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441486812|gb|AGC43507.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 1095

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 118/457 (25%), Positives = 191/457 (41%), Gaps = 74/457 (16%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
           G   ++A+  + ++  WGS  + GQ   T+  +  +P   P  T A+ + A +   H + 
Sbjct: 206 GNAHSLALDGTGRVWAWGSNSN-GQLGDTTAGYRMLPALVPGLTNATGLSAGSN--HSLV 262

Query: 113 VTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQ----VSPRSQVSRS 168
               G  + WG          +G L  GT   +   ++ S              S V +S
Sbjct: 263 RQADGTTWVWG-------ANTYGQLGDGTTTSRSAPQQVSGLAGVDGVLGAELHSLVLKS 315

Query: 169 SGGTSS-GTDGRGSGEEGSKRRRI------SLAKQTAESSSSGDENLSAFPCLVTLNPG- 220
            G   + G++ RG   +G++ +R+       L+   A ++ SG  +++          G 
Sbjct: 316 DGTVWTWGSNQRGQLGDGTQEQRLVPVQVMGLSGVVAVAAGSGQHSVAVMANGEVWTWGH 375

Query: 221 -----------------------VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS 257
                                  V   +VAAG  H LA    G VW WG   +GQLG G+
Sbjct: 376 NVEGQLGEGSSSYSAVPKRSHALVERTSVAAGRYHGLASKPDGTVWAWGDNAKGQLGDGT 435

Query: 258 RIRMVSSPHPIPCIES---------------------SYGKDRSAALSRGSVNSEGPGFR 296
             + +  P  +P + +                     ++G + +  L  GS        +
Sbjct: 436 TAQRLL-PTQVPGLTNMVAVAAGHHSSLALKADGTVWAWGDNANGQLGNGSTTDRSNPTQ 494

Query: 297 VPG-NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
           VPG   V  IA G  H+  +   G L T+G    GQ G G+T D   P  V  + G+   
Sbjct: 495 VPGLTGVVSIAAGPGHALAVKADGTLWTWGDNNTGQLGDGTTVDRPIPTQVPGVTGV--V 552

Query: 356 GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGA 415
            VAAGL+H++ +  DG V+A+G N  GQLG G      +P     P+L  V   +++ G 
Sbjct: 553 SVAAGLYHSLVVKVDGTVWAWGSNYEGQLGGGTTTIRPVPS--QTPNLTGV--VAITAGL 608

Query: 416 RHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
            H+  +  DG V+ WG+N +GQLG G+   + +P+QV
Sbjct: 609 YHSLALKTDGTVWAWGYNLHGQLGNGNTTTQQVPTQV 645



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 120/444 (27%), Positives = 180/444 (40%), Gaps = 65/444 (14%)

Query: 37  RLPLTVGSAWR-DVCGGGCGFAMAISDSRKLITWGSTDDLGQ--SYVTSGKHGEIPEPFP 93
           R+P+     W     G G   ++A+     + TWG  ++ GQ     T+G+      P  
Sbjct: 89  RVPVRAWGLWNISAVGAGDLHSLAMKSDGTVWTWGG-NNFGQLGDGTTTGRQ----APVQ 143

Query: 94  LPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSS 153
           +P    +V+ AAG++H +A+   G V+ WG              S G G   D    Q  
Sbjct: 144 VPGLGEVVRVAAGFSHSLALKTDGTVWAWG--------------SNGAGRLGDGTTTQRL 189

Query: 154 FLTE-QVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFP 212
              + Q  P  +   +    S   DG G            L   TA            + 
Sbjct: 190 MPVQVQGLPTIKAIAAGNAHSLALDGTGRVWAWGSNSNGQLGDTTA-----------GYR 238

Query: 213 CLVTLNPGVRIAT-VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
            L  L PG+  AT ++AG  H+L     G  W WG    GQLG G+     S+P  +  +
Sbjct: 239 MLPALVPGLTNATGLSAGSNHSLVRQADGTTWVWGANTYGQLGDGTTTSR-SAPQQVSGL 297

Query: 272 ES---------------------SYGKDRSAALSRGSVNSEGPGFRVPG-NYVKGIACG- 308
                                  ++G ++   L  G+        +V G + V  +A G 
Sbjct: 298 AGVDGVLGAELHSLVLKSDGTVWTWGSNQRGQLGDGTQEQRLVPVQVMGLSGVVAVAAGS 357

Query: 309 GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICIS 368
           G+HS  +   G + T+G  + GQ G+GS+     P    +L  ++   VAAG +H +   
Sbjct: 358 GQHSVAVMANGEVWTWGHNVEGQLGEGSSSYSAVPKRSHAL--VERTSVAAGRYHGLASK 415

Query: 369 SDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVF 428
            DG V+A+G N  GQLG G      LP     P L N+   +V+ G   +  +  DG V+
Sbjct: 416 PDGTVWAWGDNAKGQLGDGTTAQRLLPT--QVPGLTNM--VAVAAGHHSSLALKADGTVW 471

Query: 429 CWGWNKYGQLGLGDVIDRNIPSQV 452
            WG N  GQLG G   DR+ P+QV
Sbjct: 472 AWGDNANGQLGNGSTTDRSNPTQV 495



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 87/261 (33%), Positives = 129/261 (49%), Gaps = 37/261 (14%)

Query: 219 PGVR-IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR-IRMVSSPHP----IPCIE 272
           PGV  + +VAAG  H+L +   G VW WG   EGQLG G+  IR V S  P    +  I 
Sbjct: 546 PGVTGVVSVAAGLYHSLVVKVDGTVWAWGSNYEGQLGGGTTTIRPVPSQTPNLTGVVAIT 605

Query: 273 S---------------SYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGG--RHSAVI 315
           +               ++G +    L  G+  ++    +VPG +  G++ G    HS  I
Sbjct: 606 AGLYHSLALKTDGTVWAWGYNLHGQLGNGNTTTQQVPTQVPG-FSGGVSLGAGIYHSLAI 664

Query: 316 TDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYA 375
              G++ T+G+   GQ G G+T    +P  V+   G+    +AAG +H++ + +DG  +A
Sbjct: 665 KTDGSVWTWGYNYRGQLGDGTTTSRTTPTQVAGFTGVSF--LAAGEFHSVALRTDGTAWA 722

Query: 376 FGGNQFGQLGTGGDQ---AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGW 432
           +G N  GQLG G  +   A TL RL+ A        + ++ G R TA    DG V+ WG 
Sbjct: 723 WGSNDKGQLGDGSARWHYAPTLSRLVGA--------RGLAAGDRFTAARKSDGTVWAWGD 774

Query: 433 NKYGQLGLGDVIDRNIPSQVT 453
           N YGQLG G  +    P+QV+
Sbjct: 775 NTYGQLGDGTTLATRSPAQVS 795



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 80/235 (34%), Positives = 110/235 (46%), Gaps = 36/235 (15%)

Query: 219  PGVR-IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
            PG+  +  VAAG  H+LAL   G VWGWG    GQLG G+  + V+              
Sbjct: 845  PGLTGVVAVAAGYAHSLALKADGTVWGWGENIYGQLGDGTTTQRVAP------------- 891

Query: 278  DRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST 337
                        ++  G  V    V  +A G  H       G L  +G+  +GQ G G+T
Sbjct: 892  ------------TQAQGLTV----VLSMASGTYHGLARKADGTLWAWGYNAHGQLGIGTT 935

Query: 338  DDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
               L+P  V SL G+    ++A   H++ +  DG V+A+G N  GQLG G      +P  
Sbjct: 936  TTRLAPTLVPSLSGV--VSLSATHQHSLALKPDGTVWAWGYNSNGQLGDGTTTTRHVPT- 992

Query: 398  LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
              APSL +V  K+VS G  ++  +  DG V+ WG N  GQLG G    R  P+QV
Sbjct: 993  -QAPSLSSV--KAVSAGFEYSLAVKADGTVWSWGINDRGQLGSGTATPRATPTQV 1044



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 83/253 (32%), Positives = 113/253 (44%), Gaps = 27/253 (10%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS--------------RIRMVSS--P 265
           R+  VAAG  HTLA+   G VW WG    GQLG GS               I  V +   
Sbjct: 49  RLGLVAAGRHHTLAVRSDGTVWAWGDNAYGQLGNGSLQDQRVPVRAWGLWNISAVGAGDL 108

Query: 266 HPIPCIES----SYGKDRSAALSRGSVNSEGPGFRVPG-NYVKGIACGGRHSAVITDAGA 320
           H +         ++G +    L  G+        +VPG   V  +A G  HS  +   G 
Sbjct: 109 HSLAMKSDGTVWTWGGNNFGQLGDGTTTGRQAPVQVPGLGEVVRVAAGFSHSLALKTDGT 168

Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
           +  +G    G+ G G+T   L P  V  L    I+ +AAG  H++ +   G V+A+G N 
Sbjct: 169 VWAWGSNGAGRLGDGTTTQRLMPVQVQGL--PTIKAIAAGNAHSLALDGTGRVWAWGSNS 226

Query: 381 FGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL 440
            GQLG        LP L+  P L N  +  +S G+ H+ V   DG  + WG N YGQLG 
Sbjct: 227 NGQLGDTTAGYRMLPALV--PGLTN--ATGLSAGSNHSLVRQADGTTWVWGANTYGQLGD 282

Query: 441 GDVIDRNIPSQVT 453
           G    R+ P QV+
Sbjct: 283 GTTTSRSAPQQVS 295



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 111/379 (29%), Positives = 155/379 (40%), Gaps = 72/379 (18%)

Query: 99  SIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQ 158
           +I    AG  H +A+   G V+TWG       G  FG L  GT   +     Q   L E 
Sbjct: 99  NISAVGAGDLHSLAMKSDGTVWTWG-------GNNFGQLGDGTTTGRQA-PVQVPGLGEV 150

Query: 159 VSPRSQVSRSSGGTSSGT------DGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFP 212
           V   +  S S    + GT      +G G   +G+  +R+                    P
Sbjct: 151 VRVAAGFSHSLALKTDGTVWAWGSNGAGRLGDGTTTQRL-------------------MP 191

Query: 213 CLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIE 272
             V   P   I  +AAG  H+LAL   G+VW WG    GQLG                 +
Sbjct: 192 VQVQGLP--TIKAIAAGNAHSLALDGTGRVWAWGSNSNGQLG-----------------D 232

Query: 273 SSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQC 332
           ++ G     AL  G  N+             G++ G  HS V    G    +G   YGQ 
Sbjct: 233 TTAGYRMLPALVPGLTNA------------TGLSAGSNHSLVRQADGTTWVWGANTYGQL 280

Query: 333 GQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAE 392
           G G+T    +P  VS L G  ++GV     H++ + SDG V+ +G NQ GQLG G  +  
Sbjct: 281 GDGTTTSRSAPQQVSGLAG--VDGVLGAELHSLVLKSDGTVWTWGSNQRGQLGDGTQEQR 338

Query: 393 TLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
            +P  +    L  V + +   G    AV+A +G+V+ WG N  GQLG G      +P + 
Sbjct: 339 LVP--VQVMGLSGVVAVAAGSGQHSVAVMA-NGEVWTWGHNVEGQLGEGSSSYSAVPKRS 395

Query: 453 TIEGCVPR-NVACGWWHTL 470
                V R +VA G +H L
Sbjct: 396 --HALVERTSVAAGRYHGL 412



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 75/248 (30%), Positives = 112/248 (45%), Gaps = 29/248 (11%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES------------ 273
           +AAG R T A    G VW WG    GQLG G+ +    SP  +  +              
Sbjct: 753 LAAGDRFTAARKSDGTVWAWGDNTYGQLGDGTTL-ATRSPAQVSGLTDVEGLAAGEGHVV 811

Query: 274 ---------SYGKDRSAALSRGSVNSEGPGFRVPG-NYVKGIACGGRHSAVITDAGALLT 323
                    ++G +    L  G+        +VPG   V  +A G  HS  +   G +  
Sbjct: 812 VVKMDGTVWTWGNNAKGQLGDGTTTRRLVPTQVPGLTGVVAVAAGYAHSLALKADGTVWG 871

Query: 324 FGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQ 383
           +G  +YGQ G G+T   ++P     L    +  +A+G +H +   +DG ++A+G N  GQ
Sbjct: 872 WGENIYGQLGDGTTTQRVAPTQAQGL--TVVLSMASGTYHGLARKADGTLWAWGYNAHGQ 929

Query: 384 LGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDV 443
           LG G       P L+  PSL  V   S+S   +H+  +  DG V+ WG+N  GQLG G  
Sbjct: 930 LGIGTTTTRLAPTLV--PSLSGV--VSLSATHQHSLALKPDGTVWAWGYNSNGQLGDGTT 985

Query: 444 IDRNIPSQ 451
             R++P+Q
Sbjct: 986 TTRHVPTQ 993



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/168 (34%), Positives = 80/168 (47%), Gaps = 7/168 (4%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           +A G  H+  +   G +  +G   YGQ G GS  D+  P     L    I  V AG  H+
Sbjct: 53  VAAGRHHTLAVRSDGTVWAWGDNAYGQLGNGSLQDQRVPVRAWGLW--NISAVGAGDLHS 110

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           + + SDG V+ +GGN FGQLG G       P  +  P L  V    V+ G  H+  +  D
Sbjct: 111 LAMKSDGTVWTWGGNNFGQLGDGTTTGRQAP--VQVPGLGEV--VRVAAGFSHSLALKTD 166

Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           G V+ WG N  G+LG G    R +P QV     + + +A G  H+L L
Sbjct: 167 GTVWAWGSNGAGRLGDGTTTQRLMPVQVQGLPTI-KAIAAGNAHSLAL 213



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/166 (38%), Positives = 88/166 (53%), Gaps = 13/166 (7%)

Query: 311 HSAVITDAGALLTFGWGLYG-QCGQGSTDDELSPNC---VSSLLGIQIEGVAAGLWHTIC 366
           H+ + + A  LL     + G Q G  S+ DEL+       +S LG+    VAAG  HT+ 
Sbjct: 7   HTRIASKAVGLLFMLLAVSGCQDGGPSSPDELATAKAAETASRLGL----VAAGRHHTLA 62

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           + SDG V+A+G N +GQLG G  Q + +P  + A  L N+   +V  G  H+  +  DG 
Sbjct: 63  VRSDGTVWAWGDNAYGQLGNGSLQDQRVP--VRAWGLWNI--SAVGAGDLHSLAMKSDGT 118

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           V+ WG N +GQLG G    R  P QV   G V R VA G+ H+L L
Sbjct: 119 VWTWGGNNFGQLGDGTTTGRQAPVQVPGLGEVVR-VAAGFSHSLAL 163



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 101/375 (26%), Positives = 151/375 (40%), Gaps = 78/375 (20%)

Query: 32   SPLVVRLPLTVGSAWRDVCG--GGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIP 89
            + L  R P  V S   DV G   G G  + +     + TWG+     +  +  G      
Sbjct: 784  TTLATRSPAQV-SGLTDVEGLAAGEGHVVVVKMDGTVWTWGNN---AKGQLGDGTTTRRL 839

Query: 90   EPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFE 149
             P  +P    +V  AAG+AH +A+   G V  WGW E      ++G L  GT   + V  
Sbjct: 840  VPTQVPGLTGVVAVAAGYAHSLALKADGTV--WGWGE-----NIYGQLGDGTTTQR-VAP 891

Query: 150  RQSSFLTEQVSPRS----QVSRSSGGT--SSGTDGRGSGEEGSKRRRISLAKQTAESSSS 203
             Q+  LT  +S  S     ++R + GT  + G +  G    G+   R++           
Sbjct: 892  TQAQGLTVVLSMASGTYHGLARKADGTLWAWGYNAHGQLGIGTTTTRLA----------- 940

Query: 204  GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLG-SRIRMV 262
                    P LV    GV   +++A  +H+LAL   G VW WGY   GQLG G +  R V
Sbjct: 941  --------PTLVPSLSGV--VSLSATHQHSLALKPDGTVWAWGYNSNGQLGDGTTTTRHV 990

Query: 263  SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL 322
              P   P + S                            VK ++ G  +S  +   G + 
Sbjct: 991  --PTQAPSLSS----------------------------VKAVSAGFEYSLAVKADGTVW 1020

Query: 323  TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFG 382
            ++G    GQ G G+     +P  V+ L  + +   A      + +S+DG +  FG N+ G
Sbjct: 1021 SWGINDRGQLGSGTATPRATPTQVAGLNSVTLLLAARAH--ALVVSADGTMRGFGDNEAG 1078

Query: 383  QLGTGGDQAETLPRL 397
            QLG G    +TL RL
Sbjct: 1079 QLGAG----DTLIRL 1089


>gi|390479661|ref|XP_002762827.2| PREDICTED: LOW QUALITY PROTEIN: X-linked retinitis pigmentosa
           GTPase regulator, partial [Callithrix jacchus]
          Length = 817

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 98/302 (32%), Positives = 143/302 (47%), Gaps = 53/302 (17%)

Query: 213 CLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS--------RIRMVSS 264
           C+  L P  ++   A G  HTL  ++ G V+  G   EGQLGLG         R+   +S
Sbjct: 80  CVKALKPE-KVKLAACGRNHTLVSTEGGNVYATGGNDEGQLGLGDTEERTTFHRVSFFTS 138

Query: 265 PHPIPCIESSYGKDRSAALSRGSV------NSEG------------PGFRVPGNYVKGIA 306
            H I  +  S G + SAAL+          NSEG            P     G  V  I+
Sbjct: 139 QHKIKQL--SAGSNTSAALTEDGRLFMWGDNSEGQIGLPNILNACVPHQVTIGKPVSWIS 196

Query: 307 CGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSL---LGIQIEGVAAGLWH 363
           CG  HSA +T  G L  FG    G+ G    ++ LS + +  L   +  ++  VA G  H
Sbjct: 197 CGYYHSAFVTTDGELYIFGESENGKLGL--PNELLSNHRIPQLVPEIPEKVIQVACGGEH 254

Query: 364 TICISSDGDVYAFGGNQFGQLGTGGDQAET-LPRLLDAPSLENVHSKSVS---CGARHTA 419
           ++ ++ D  VY FG  QFGQLG G    ET  P+++     EN+ +K++S   CG  H A
Sbjct: 255 SVVLTEDA-VYTFGLGQFGQLGLGTLLFETSEPKVV-----ENIGNKTISYISCGENHAA 308

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC------VPRNVACGWWHTLLLA 473
           ++ D+G ++ +G  ++G+LGLG     N  +Q T   C      V + VACG  H ++ A
Sbjct: 309 LLTDNGLMYTFGDGRHGKLGLG---LENFTNQFTPTLCCNFLKFVVKLVACGGCHMVVFA 365

Query: 474 VP 475
            P
Sbjct: 366 AP 367



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 61/171 (35%), Positives = 95/171 (55%), Gaps = 4/171 (2%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           ++CG  HSAV+T    L  FG   +GQ G GS      P CV +L   +++  A G  HT
Sbjct: 40  LSCGDEHSAVVTGNNKLYVFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHT 99

Query: 365 ICISSDGDVYAFGGNQFGQLGTGG-DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
           +  +  G+VYA GGN  GQLG G  ++  T  R+    S   +  K +S G+  +A + +
Sbjct: 100 LVSTEGGNVYATGGNDEGQLGLGDTEERTTFHRVSFFTSQHKI--KQLSAGSNTSAALTE 157

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAV 474
           DG++F WG N  GQ+GL ++++  +P QVTI   V   ++CG++H+  +  
Sbjct: 158 DGRLFMWGDNSEGQIGLPNILNACVPHQVTIGKPVSW-ISCGYYHSAFVTT 207



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 68/280 (24%), Positives = 128/280 (45%), Gaps = 40/280 (14%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
           ++ G  H+  ++   +++ +G    GQLGLGS+   VS P  +  ++    K  +   + 
Sbjct: 40  LSCGDEHSAVVTGNNKLYVFGSNNWGQLGLGSK-SAVSKPTCVKALKPEKVKLAACGRNH 98

Query: 286 GSVNSEG---------------------------PGFRVPGNYVKGIACGGRHSAVITDA 318
             V++EG                             F    + +K ++ G   SA +T+ 
Sbjct: 99  TLVSTEGGNVYATGGNDEGQLGLGDTEERTTFHRVSFFTSQHKIKQLSAGSNTSAALTED 158

Query: 319 GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           G L  +G    GQ G  +  +   P+ V+  +G  +  ++ G +H+  +++DG++Y FG 
Sbjct: 159 GRLFMWGDNSEGQIGLPNILNACVPHQVT--IGKPVSWISCGYYHSAFVTTDGELYIFGE 216

Query: 379 NQFGQLGTGGD--QAETLPRLLDAPSL-ENVHSKSVSCGARHTAVIADDGKVFCWGWNKY 435
           ++ G+LG   +      +P+L+  P + E V    V+CG  H+ V+ +D  V+ +G  ++
Sbjct: 217 SENGKLGLPNELLSNHRIPQLV--PEIPEKV--IQVACGGEHSVVLTEDA-VYTFGLGQF 271

Query: 436 GQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLA 473
           GQLGLG ++      +V   I       ++CG  H  LL 
Sbjct: 272 GQLGLGTLLFETSEPKVVENIGNKTISYISCGENHAALLT 311



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 73/299 (24%), Positives = 121/299 (40%), Gaps = 56/299 (18%)

Query: 103 AAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPR 162
           AA G  H +  TEGG VY  G       G   G L  G   ++  F R  SF T Q   +
Sbjct: 92  AACGRNHTLVSTEGGNVYATG-------GNDEGQLGLGDTEERTTFHR-VSFFTSQHKIK 143

Query: 163 SQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLN 218
              + S+   +   DGR    G   EG    +I L               +  P  VT+ 
Sbjct: 144 QLSAGSNTSAALTEDGRLFMWGDNSEG----QIGLPNILN----------ACVPHQVTI- 188

Query: 219 PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGL------GSRIRMVSSPHPIPCIE 272
            G  ++ ++ G  H+  ++  G+++ +G    G+LGL        RI  +    P   I+
Sbjct: 189 -GKPVSWISCGYYHSAFVTTDGELYIFGESENGKLGLPNELLSNHRIPQLVPEIPEKVIQ 247

Query: 273 SSYGKDRSAALSRGSVNSEGPG--------------------FRVPGNYVKGIACGGRHS 312
            + G + S  L+  +V + G G                      +    +  I+CG  H+
Sbjct: 248 VACGGEHSVVLTEDAVYTFGLGQFGQLGLGTLLFETSEPKVVENIGNKTISYISCGENHA 307

Query: 313 AVITDAGALLTFGWGLYGQCGQGSTD--DELSPNCVSSLLGIQIEGVAAGLWHTICISS 369
           A++TD G + TFG G +G+ G G  +  ++ +P    + L   ++ VA G  H +  ++
Sbjct: 308 ALLTDNGLMYTFGDGRHGKLGLGLENFTNQFTPTLCCNFLKFVVKLVACGGCHMVVFAA 366


>gi|338530520|ref|YP_004663854.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
 gi|337256616|gb|AEI62776.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
          Length = 1457

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 122/408 (29%), Positives = 170/408 (41%), Gaps = 77/408 (18%)

Query: 53  GCGFAMAISDSRKLITWG--STDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
           G  F +A+ D   +  WG  S+  LG    T     +   P  +   + I    AG  H 
Sbjct: 208 GFDFTLAVMDDGTVRAWGANSSGQLGDGTFT-----QRLAPVEVAHISGISAVTAGTYHA 262

Query: 111 VAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSS- 169
           VA+ + G V+TWG           G L  G   D+ V  R      E+V   + +  SS 
Sbjct: 263 VALGKDGGVWTWGANSS-------GQLGDGAWSDRAVPARVPGL--ERVKAVASMDASSL 313

Query: 170 ----GGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVR-IA 224
                G+       GSG+ G                 SG ++  A P  V   PG+R +A
Sbjct: 314 ALLEAGSVLAWGANGSGQLGD----------------SGTDD-RATPGEV---PGLRSVA 353

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            V  G +H LAL   G +W WG G  GQLG G   R     H +P               
Sbjct: 354 AVVGGAQHALALRGDGTLWAWGGGLAGQLGHGGSER-----HVVPA-------------- 394

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN 344
                   P  R+    V  +A G  HS      G + ++G   YGQ G G+T +  +  
Sbjct: 395 --------PLLRLA--DVASMAAGSFHSLAALGDGTVWSWGRNTYGQLGDGTTAERHAAV 444

Query: 345 CVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLE 404
            V  L GI+  GVAA   H++ + +DG V+A+G N  GQLG G  +    P  +    L 
Sbjct: 445 RVEGLSGIR--GVAASGHHSLAVGADGTVWAWGRNAAGQLGDGSTRDRARP--VAVSGLT 500

Query: 405 NVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
           +V   +V+ G  HT  +  DG V+ WG+N  GQLG G  +DR  P +V
Sbjct: 501 SV--VAVATGGSHTMALRGDGTVWAWGYNALGQLGDGTTVDRLTPVRV 546



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 129/442 (29%), Positives = 184/442 (41%), Gaps = 54/442 (12%)

Query: 52  GGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCV 111
           GG   A+A+     L  WG        +  S +H     P PL   A +   AAG  H +
Sbjct: 357 GGAQHALALRGDGTLWAWGGGLAGQLGHGGSERH---VVPAPLLRLADVASMAAGSFHSL 413

Query: 112 AVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG 171
           A    G V++WG          +G L  GT       ER ++   E +S    V+     
Sbjct: 414 AALGDGTVWSWGRN-------TYGQLGDGT-----TAERHAAVRVEGLSGIRGVA----- 456

Query: 172 TSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGR 231
            +SG      G +G+     +  +  A     G     A P  V ++    +  VA GG 
Sbjct: 457 -ASGHHSLAVGADGTV---WAWGRNAAGQLGDGSTRDRARP--VAVSGLTSVVAVATGGS 510

Query: 232 HTLALSDIGQVWGWGYGGEGQLGLGS---RIRMVSSPHPIPCIESSYGKDRSAALS-RGS 287
           HT+AL   G VW WGY   GQLG G+   R+  V        +  + G   S AL   G+
Sbjct: 511 HTMALRGDGTVWAWGYNALGQLGDGTTVDRLTPVRVARLDSVVAVAAGTYFSMALRGDGT 570

Query: 288 VNSEGPGF----------------RVPG-NYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
           V + G GF                +V G   V  +A G  H+  +   G +  +G    G
Sbjct: 571 VWTWGEGFEGQVGDGGGVQRLFPVQVAGLTNVTRVAAGSAHALAVRGDGTVWAWGDNGEG 630

Query: 331 QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
           Q G G+  D   P  V  L G  I  V+ G  H++ +  DG V A+G N +GQLG G   
Sbjct: 631 QLGDGTWSDRFRPVQVPGLTG--ITAVSGGRSHSMALHGDGSVRAWGYNGYGQLGDGTFT 688

Query: 391 AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
           +   P ++  P L  + +   S    H   +  DG +  WG+N++GQLGLG     + P 
Sbjct: 689 SRVRPAVV--PGLTGIQALHPSH--LHVLALHADGTLRGWGYNRFGQLGLGAAGWSSRPV 744

Query: 451 QVTIEGCVPRNVACGWWHTLLL 472
           QV   G V R +A G  HTL++
Sbjct: 745 QVRGLGRVDR-LAVGRAHTLMV 765



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 84/282 (29%), Positives = 125/282 (44%), Gaps = 42/282 (14%)

Query: 222  RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES-------- 273
            R+  ++AG  H +AL + G VW WG    GQLG G+       P  +P +          
Sbjct: 1001 RVRAMSAGAHHVVALGEDGAVWTWGDNTLGQLGDGTSAPTWMWPRQVPELRDVEAVAAGE 1060

Query: 274  -------------SYGKDRSAALSRGS---------VNSEGPGFRVPGNYVKGIACGGRH 311
                         ++G +    L  G          V  E    R P   V+  A   +H
Sbjct: 1061 QFSVAVLVGGGAHAWGSNEYGQLGDGKTGPRLTPVQVRIEASKLRQPVRTVRAWA---QH 1117

Query: 312  SAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDG 371
            +  +   G +  +G   +GQ G G+T+   +P  V  L G+    V+ G WH++ + SDG
Sbjct: 1118 AVALMADGTVQAWGDNAHGQLGDGTTERRAAPVVVRGLTGVVA--VSTGAWHSLALRSDG 1175

Query: 372  DVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWG 431
             V+A+G N FGQLG G   + T P  +    L+ V   ++  G  H   +  DG V+ WG
Sbjct: 1176 TVWAWGANGFGQLGDGTTLSRTTP--VRVAGLQKV--VAIGAGGYHALAVRSDGSVWAWG 1231

Query: 432  WNKYGQLGLGDVIDRNIPSQVTIEGCVP-RNVACGWWHTLLL 472
            +N +GQLG G    R +P  V +EG     +VA G  H+L L
Sbjct: 1232 YNAFGQLGDGTAESRLLP--VRVEGLSNVTSVAGGDHHSLAL 1271



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 130/451 (28%), Positives = 185/451 (41%), Gaps = 72/451 (15%)

Query: 37   RLPLTVGSAWR-DVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPE---PF 92
            R+P  V S  R      G    +A+ +   + TWG  + LGQ     G     P    P 
Sbjct: 991  RVPKQVTSVKRVRAMSAGAHHVVALGEDGAVWTWGD-NTLGQL----GDGTSAPTWMWPR 1045

Query: 93   PLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQS 152
             +P    +   AAG    VAV  GG  + WG  E        GD  TG  L       ++
Sbjct: 1046 QVPELRDVEAVAAGEQFSVAVLVGGGAHAWGSNEYGQ----LGDGKTGPRLTPVQVRIEA 1101

Query: 153  SFLTEQVS-----PRSQVSRSSGGTSS--GTDGRGSGEEGSKRRRISLAKQTAESSSSGD 205
            S L + V       +  V+  + GT    G +  G   +G+  RR               
Sbjct: 1102 SKLRQPVRTVRAWAQHAVALMADGTVQAWGDNAHGQLGDGTTERR--------------- 1146

Query: 206  ENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSP 265
                A P +V    GV    V+ G  H+LAL   G VW WG  G GQLG G+ +   ++P
Sbjct: 1147 ----AAPVVVRGLTGV--VAVSTGAWHSLALRSDGTVWAWGANGFGQLGDGTTLSR-TTP 1199

Query: 266  HPIPCIES---------------------SYGKDRSAALSRGSVNSEGPGFRVPG-NYVK 303
              +  ++                      ++G +    L  G+  S     RV G + V 
Sbjct: 1200 VRVAGLQKVVAIGAGGYHALAVRSDGSVWAWGYNAFGQLGDGTAESRLLPVRVEGLSNVT 1259

Query: 304  GIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWH 363
             +A G  HS  +   G+L  +G    GQ G G+     S   V  + G+ +E V AG  H
Sbjct: 1260 SVAGGDHHSLALLADGSLGAWGNNAAGQLGDGTGTTRYSRVWVKGVDGV-VE-VRAGAAH 1317

Query: 364  TICISSDGDVYAFGGNQFGQLGTGGDQAET--LPRLLDAPSLENVHSKSVSCGARHTAVI 421
            T+ +  DG V+ +G N   QLG G D   T  +PR +  P L  V   ++  GARH+  +
Sbjct: 1318 TLALRGDGTVWTWGDNTHSQLGAGDDSTRTRIVPRPV--PGLSGV--TAIGAGARHSFAV 1373

Query: 422  ADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
               G V+ WG N +GQLGLGD  +R  P +V
Sbjct: 1374 GPKGTVWAWGRNSHGQLGLGDNANRAEPLRV 1404



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 112/250 (44%), Gaps = 30/250 (12%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES------------ 273
           +AAG +H+L +S  G VW WG    GQLG  +      +P P+P                
Sbjct: 54  IAAGSQHSLYVSPTGAVWAWGGNTSGQLGGEATPLQRLAPAPLPSPRDIVSVVSGEAHSL 113

Query: 274 ---------SYGKDRSAALSRGSVNSEGPGFRVPG-NYVKGIACGGRHSAVITDAGALLT 323
                    ++G + S  L  G+        +V G   V  +A G  HS  +   G +  
Sbjct: 114 ALDEAGTVWAWGGNSSGQLGDGTTTDRVTPMQVAGLTDVVAVAAGDFHSLALRGDGTVWA 173

Query: 324 FGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQ 383
           +G   +GQ G+G T+  L+P  V  L G+    +AAG   T+ +  DG V A+G N  GQ
Sbjct: 174 WGTNFHGQLGRGHTEPGLTPEPVPGLEGVVA--LAAGFDFTLAVMDDGTVRAWGANSSGQ 231

Query: 384 LGTGGDQAETLPRLLDAPSLENVHSKS-VSCGARHTAVIADDGKVFCWGWNKYGQLGLGD 442
           LG G     T  + L    + ++   S V+ G  H   +  DG V+ WG N  GQLG G 
Sbjct: 232 LGDG-----TFTQRLAPVEVAHISGISAVTAGTYHAVALGKDGGVWTWGANSSGQLGDGA 286

Query: 443 VIDRNIPSQV 452
             DR +P++V
Sbjct: 287 WSDRAVPARV 296



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 112/386 (29%), Positives = 156/386 (40%), Gaps = 54/386 (13%)

Query: 90  EPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFE 149
            P  +    S+V  A G +H +A+   G V+ WG+          G L  GT +D+    
Sbjct: 492 RPVAVSGLTSVVAVATGGSHTMALRGDGTVWAWGYN-------ALGQLGDGTTVDR---- 540

Query: 150 RQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLS 209
                   +V+    V   + GT      RG G         +  +        G     
Sbjct: 541 ----LTPVRVARLDSVVAVAAGTYFSMALRGDGTV------WTWGEGFEGQVGDGGGVQR 590

Query: 210 AFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS---RIRMVSSPH 266
            FP  V +     +  VAAG  H LA+   G VW WG  GEGQLG G+   R R V  P 
Sbjct: 591 LFP--VQVAGLTNVTRVAAGSAHALAVRGDGTVWAWGDNGEGQLGDGTWSDRFRPVQVPG 648

Query: 267 PIPCIESSYGKDRSAALS-RGSVNSEG-----------------PGFRVPG-NYVKGIAC 307
                  S G+  S AL   GSV + G                 P   VPG   ++ +  
Sbjct: 649 LTGITAVSGGRSHSMALHGDGSVRAWGYNGYGQLGDGTFTSRVRPAV-VPGLTGIQALHP 707

Query: 308 GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI 367
              H   +   G L  +G+  +GQ G G+      P  V  L   +++ +A G  HT+ +
Sbjct: 708 SHLHVLALHADGTLRGWGYNRFGQLGLGAAGWSSRPVQVRGL--GRVDRLAVGRAHTLMV 765

Query: 368 SSDGDVYAFGGNQFGQLGTGGDQAETLPRLLD-APSLENVHSKSVSCGARHTAVIADDGK 426
             DG V A+G N  GQLG G       P L+   P +     +SV+ G  H+  +A DG 
Sbjct: 766 RPDGAVLAWGENASGQLGDGTTTHRAGPVLVRGVPCV-----RSVASGVLHSLALACDGS 820

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQV 452
           V+ WG N  GQLG G    R IP++V
Sbjct: 821 VWAWGANGRGQLGDGTTASRVIPARV 846



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 89/288 (30%), Positives = 130/288 (45%), Gaps = 56/288 (19%)

Query: 223  IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPC----IES----- 273
            I +VA G  H LA  + G +W WG  G GQLG GS     ++P P P     +E      
Sbjct: 902  IMSVALGETHGLAAGEDGALWAWGANGSGQLGEGS-----TTPSPTPVRVKGLEGVASVS 956

Query: 274  ----------------SYGKDRSAALSRGSVNSEGPGFRVPGNY-----VKGIACGGRHS 312
                            ++G + S  L  G+ +S+    RVP        V+ ++ G  H 
Sbjct: 957  AGRAFSLAVRQDGTAWAWGANPSGQLGDGTNHSQ----RVPKQVTSVKRVRAMSAGAHHV 1012

Query: 313  AVITDAGALLTFGWGLYGQCGQGSTDDE-LSPNCVSSLLGIQIEGVAAGLWHTICISSDG 371
              + + GA+ T+G    GQ G G++    + P  V  L    +E VAAG   ++ +   G
Sbjct: 1013 VALGEDGAVWTWGDNTLGQLGDGTSAPTWMWPRQVPELR--DVEAVAAGEQFSVAVLVGG 1070

Query: 372  DVYAFGGNQFGQLGTGGDQAETLPRL------LDAPSLENVHSKSVSCGARHTAVIADDG 425
              +A+G N++GQLG G    +T PRL      ++A  L     ++V   A+H   +  DG
Sbjct: 1071 GAHAWGSNEYGQLGDG----KTGPRLTPVQVRIEASKLRQ-PVRTVRAWAQHAVALMADG 1125

Query: 426  KVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
             V  WG N +GQLG G    R  P  V  + G V   V+ G WH+L L
Sbjct: 1126 TVQAWGDNAHGQLGDGTTERRAAPVVVRGLTGVVA--VSTGAWHSLAL 1171



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 107/398 (26%), Positives = 158/398 (39%), Gaps = 62/398 (15%)

Query: 60  ISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKA-----AAGWAHCVAVT 114
           ++ +R+L+T+  +  L  +   +G+   + +P    T+   V A     AAG  H + V+
Sbjct: 6   LAGTRRLVTFLVSALLLVACEPTGELAALEQPRAARTQRITVTAPPMRIAAGSQHSLYVS 65

Query: 115 EGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSS 174
             G V+ WG           G+ S   G +    +R +       SPR  VS  SG   S
Sbjct: 66  PTGAVWAWG-----------GNTSGQLGGEATPLQRLAP--APLPSPRDIVSVVSGEAHS 112

Query: 175 GTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTL 234
                   E G+       A     S   GD   +     + +     +  VAAG  H+L
Sbjct: 113 ----LALDEAGTV-----WAWGGNSSGQLGDGTTTDRVTPMQVAGLTDVVAVAAGDFHSL 163

Query: 235 ALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPG 294
           AL   G VW WG    GQLG G       +P P+P +E                      
Sbjct: 164 ALRGDGTVWAWGTNFHGQLGRG-HTEPGLTPEPVPGLEG--------------------- 201

Query: 295 FRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQI 354
                  V  +A G   +  + D G +  +G    GQ G G+    L+P  V+ + G  I
Sbjct: 202 -------VVALAAGFDFTLAVMDDGTVRAWGANSSGQLGDGTFTQRLAPVEVAHISG--I 252

Query: 355 EGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
             V AG +H + +  DG V+ +G N  GQLG G      +P  +  P LE V  K+V+  
Sbjct: 253 SAVTAGTYHAVALGKDGGVWTWGANSSGQLGDGAWSDRAVPARV--PGLERV--KAVASM 308

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
              +  + + G V  WG N  GQLG     DR  P +V
Sbjct: 309 DASSLALLEAGSVLAWGANGSGQLGDSGTDDRATPGEV 346



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 112/257 (43%), Gaps = 31/257 (12%)

Query: 222  RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLG---SRIRMVSSPHPIPCIESSYGKD 278
            ++  + AGG H LA+   G VW WGY   GQLG G   SR+  V     +  + S  G D
Sbjct: 1207 KVVAIGAGGYHALAVRSDGSVWAWGYNAFGQLGDGTAESRLLPVRV-EGLSNVTSVAGGD 1265

Query: 279  RS--AALSRGSVNSEGPG-----------FRVPGNYVKGI------ACGGRHSAVITDAG 319
                A L+ GS+ + G              R    +VKG+        G  H+  +   G
Sbjct: 1266 HHSLALLADGSLGAWGNNAAGQLGDGTGTTRYSRVWVKGVDGVVEVRAGAAHTLALRGDG 1325

Query: 320  ALLTFGWGLYGQCGQG--STDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
             + T+G   + Q G G  ST   + P  V  L G+    + AG  H+  +   G V+A+G
Sbjct: 1326 TVWTWGDNTHSQLGAGDDSTRTRIVPRPVPGLSGVTA--IGAGARHSFAVGPKGTVWAWG 1383

Query: 378  GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQ 437
             N  GQLG G +     P  L    L  V    VS GA  +  +  DG V  WG + +G 
Sbjct: 1384 RNSHGQLGLGDNANRAEP--LRVKELAEV--SVVSGGADFSLAMQRDGTVSSWGSSLHGA 1439

Query: 438  LGLGDVIDRNIPSQVTI 454
            LGLG    R+ P QV +
Sbjct: 1440 LGLGTAGQRSSPGQVAL 1456



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 86/272 (31%), Positives = 113/272 (41%), Gaps = 28/272 (10%)

Query: 222  RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSS--PHPIPCIES-SYGKD 278
            R+  +A G  HTL +   G V  WG    GQLG G+            +PC+ S + G  
Sbjct: 751  RVDRLAVGRAHTLMVRPDGAVLAWGENASGQLGDGTTTHRAGPVLVRGVPCVRSVASGVL 810

Query: 279  RSAALS------------RGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFG- 325
             S AL+            RG +       RV    V G+      +A    + ALL  G 
Sbjct: 811  HSLALACDGSVWAWGANGRGQLGDGTTASRVIPARVDGLQGAVAVAAGGDASLALLADGT 870

Query: 326  ---WG--LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
               WG   +GQ G GST D   P  +   L   I  VA G  H +    DG ++A+G N 
Sbjct: 871  AWAWGANAHGQLGDGSTSDRAVPGQLK--LPSNIMSVALGETHGLAAGEDGALWAWGANG 928

Query: 381  FGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL 440
             GQLG G       P  +    LE V   SVS G   +  +  DG  + WG N  GQLG 
Sbjct: 929  SGQLGEGSTTPSPTP--VRVKGLEGV--ASVSAGRAFSLAVRQDGTAWAWGANPSGQLGD 984

Query: 441  GDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
            G    + +P QVT    V R ++ G  H + L
Sbjct: 985  GTNHSQRVPKQVTSVKRV-RAMSAGAHHVVAL 1015



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/117 (40%), Positives = 61/117 (52%), Gaps = 6/117 (5%)

Query: 357 VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR 416
           +AAG  H++ +S  G V+A+GGN  GQLG    +A  L RL  AP        SV  G  
Sbjct: 54  IAAGSQHSLYVSPTGAVWAWGGNTSGQLG---GEATPLQRLAPAPLPSPRDIVSVVSGEA 110

Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
           H+  + + G V+ WG N  GQLG G   DR  P QV  +   V   VA G +H+L L
Sbjct: 111 HSLALDEAGTVWAWGGNSSGQLGDGTTTDRVTPMQVAGLTDVVA--VAAGDFHSLAL 165


>gi|195126363|ref|XP_002007640.1| GI13052 [Drosophila mojavensis]
 gi|193919249|gb|EDW18116.1| GI13052 [Drosophila mojavensis]
          Length = 1053

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 83/255 (32%), Positives = 115/255 (45%), Gaps = 32/255 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  +A G RH++ALS+ GQV+ WG    GQLG  S   +V  P  +  + S         
Sbjct: 88  ITQIACGSRHSMALSEWGQVFSWGDNECGQLGHASDQDIVKLPKIVRNLVSK-------- 139

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDD--- 339
                              V  IACG  HS  +T  G L ++G  LYGQ G  S +D   
Sbjct: 140 ------------------TVVQIACGSNHSLALTCCGELYSWGSNLYGQLGVSSPNDLQQ 181

Query: 340 ELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLD 399
             +P  +++LLGI +  +A G  H+  IS    V+ +G N  GQLG   +     P  L 
Sbjct: 182 SNTPMRLTTLLGIPVSAIACGGNHSFLISKSSAVFGWGRNNCGQLGLNDETNRAYPTQLK 241

Query: 400 APSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCV 458
             +L  +  + V+CG   +  +  +G VF  G   YGQLG G   +  +P  V  + G  
Sbjct: 242 --TLRTLGVRFVACGDEFSVFLTIEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGST 299

Query: 459 PRNVACGWWHTLLLA 473
              VACG  HTL L 
Sbjct: 300 ISQVACGNRHTLALV 314



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 165/383 (43%), Gaps = 61/383 (15%)

Query: 26  QRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKH 85
           +   IL+P   R+P    SA   +  G     + ++ S K+   GS D     Y   G  
Sbjct: 20  EEEQILTP--SRIPWKPDSAVNQIACGH-RHTLFLTASGKVYACGSND-----YSQLGHE 71

Query: 86  GEIPEPFPLP--TEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGL 143
                P  +P   +  I + A G  H +A++E G+V++WG  EC       G L  G   
Sbjct: 72  LPTKRPLQIPELQDYVITQIACGSRHSMALSEWGQVFSWGDNEC-------GQL--GHAS 122

Query: 144 DKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGS----GEEGSKRRRISLAKQTAE 199
           D+D+ +     L + V  R+ VS++    + G++   +    GE  S     +L  Q   
Sbjct: 123 DQDIVK-----LPKIV--RNLVSKTVVQIACGSNHSLALTCCGELYSWGS--NLYGQLG- 172

Query: 200 SSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
            SS  D   S  P  +T   G+ ++ +A GG H+  +S    V+GWG    GQLGL    
Sbjct: 173 VSSPNDLQQSNTPMRLTTLLGIPVSAIACGGNHSFLISKSSAVFGWGRNNCGQLGLNDE- 231

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAG 319
                             +R+      ++ + G         V+ +ACG   S  +T  G
Sbjct: 232 -----------------TNRAYPTQLKTLRTLG---------VRFVACGDEFSVFLTIEG 265

Query: 320 ALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFGG 378
            + T G G YGQ G G + +E+ P  V  L+G  I  VA G  HT+  + S G +Y FG 
Sbjct: 266 GVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTISQVACGNRHTLALVPSRGRIYGFGL 325

Query: 379 NQFGQLGTGGDQAETLPRLLDAP 401
              GQLGT   ++  LP+L+  P
Sbjct: 326 GSSGQLGTRNTKSLNLPQLVIGP 348



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 70/242 (28%), Positives = 111/242 (45%), Gaps = 42/242 (17%)

Query: 241 QVWGWGYGGEGQLGLG-SRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPG 299
           +++ WG    GQLGLG      + +P  IP                            P 
Sbjct: 2   ELYCWGNASHGQLGLGGIEEEQILTPSRIPW--------------------------KPD 35

Query: 300 NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAA 359
           + V  IACG RH+  +T +G +   G   Y Q G         P  +  L    I  +A 
Sbjct: 36  SAVNQIACGHRHTLFLTASGKVYACGSNDYSQLGHELPTKR--PLQIPELQDYVITQIAC 93

Query: 360 GLWHTICISSDGDVYAFGGNQFGQLGTGGDQ-AETLPRLLDAPSLENVHSKSV---SCGA 415
           G  H++ +S  G V+++G N+ GQLG   DQ    LP++     + N+ SK+V   +CG+
Sbjct: 94  GSRHSMALSEWGQVFSWGDNECGQLGHASDQDIVKLPKI-----VRNLVSKTVVQIACGS 148

Query: 416 RHTAVIADDGKVFCWGWNKYGQLGL---GDVIDRNIPSQVTIEGCVPRN-VACGWWHTLL 471
            H+  +   G+++ WG N YGQLG+    D+   N P ++T    +P + +ACG  H+ L
Sbjct: 149 NHSLALTCCGELYSWGSNLYGQLGVSSPNDLQQSNTPMRLTTLLGIPVSAIACGGNHSFL 208

Query: 472 LA 473
           ++
Sbjct: 209 IS 210



 Score = 45.1 bits (105), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 80/333 (24%), Positives = 127/333 (38%), Gaps = 55/333 (16%)

Query: 17  WGYLPGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLG 76
           +  L   LP + P+  P +    +T     +  CG     +MA+S+  ++ +WG  +   
Sbjct: 65  YSQLGHELPTKRPLQIPELQDYVIT-----QIACGSR--HSMALSEWGQVFSWGDNECGQ 117

Query: 77  QSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGD 136
             + +     ++P+        ++V+ A G  H +A+T  GE+Y+WG         ++G 
Sbjct: 118 LGHASDQDIVKLPKIVRNLVSKTVVQIACGSNHSLALTCCGELYSWG-------SNLYGQ 170

Query: 137 LSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQ 196
           L   +  D           T    P S +  + GG  S    + S   G  R        
Sbjct: 171 LGVSSPNDLQQSNTPMRLTTLLGIPVSAI--ACGGNHSFLISKSSAVFGWGRNNCG---- 224

Query: 197 TAESSSSGDENLSAFPC-LVTLNP-GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG 254
                   DE   A+P  L TL   GVR   VA G   ++ L+  G V+  G G  GQLG
Sbjct: 225 ---QLGLNDETNRAYPTQLKTLRTLGVRF--VACGDEFSVFLTIEGGVFTCGAGAYGQLG 279

Query: 255 LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHS-A 313
            G      SS   +P +                         + G+ +  +ACG RH+ A
Sbjct: 280 HG-----FSSNEMLPRM----------------------VMELMGSTISQVACGNRHTLA 312

Query: 314 VITDAGALLTFGWGLYGQCGQGSTDDELSPNCV 346
           ++   G +  FG G  GQ G  +T     P  V
Sbjct: 313 LVPSRGRIYGFGLGSSGQLGTRNTKSLNLPQLV 345


>gi|281354478|gb|EFB30062.1| hypothetical protein PANDA_019422 [Ailuropoda melanoleuca]
          Length = 4814

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 129/255 (50%), Gaps = 29/255 (11%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++IA   + G H LAL+  G+V+ WG G  G+LG G  +     P   P + S++   ++
Sbjct: 474 IKIAA-HSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 527

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                             G +V  IACG  +SA IT  G L T+G G YG+ G GS++DE
Sbjct: 528 ------------------GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 569

Query: 341 LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
             P  V+ L G+++  VA  +G   T+ ++ +G V+++G   +G+LG GG      P+L+
Sbjct: 570 AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLI 629

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGC 457
           +   L+++    V CG++ +  +  DG+V+ WG     +LG G       P  +  ++G 
Sbjct: 630 E--KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGK 687

Query: 458 VPRNVACGWWHTLLL 472
              +VA G  H L L
Sbjct: 688 KVIDVAAGSTHCLAL 702



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 128/303 (42%), Gaps = 80/303 (26%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GGRH  AL+  G+V+ WG G +G+LG  SR+     P  I  +++   +D  
Sbjct: 3025 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRD-- 3081

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                    IACG  HSA +T +G L T+G G YG+ G G    +
Sbjct: 3082 ------------------------IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ 3117

Query: 341  LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V  LLG ++  VA G     T+ ++ +G V+++G   FG+LG GG +   +P+ +
Sbjct: 3118 LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNI 3177

Query: 399  DAPSLE------------------------------------NVHSKS------------ 410
            +  + +                                    +VH +             
Sbjct: 3178 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI 3237

Query: 411  --VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWW 467
              V+ GA H   + D G+V+ WG N +GQ G G       P+ V  +EG     VACG  
Sbjct: 3238 VHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3297

Query: 468  HTL 470
            H++
Sbjct: 3298 HSV 3300



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 144/365 (39%), Gaps = 82/365 (22%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V   +G  HC+A++  GEVY+WG  E         D   G G ++   +R    + E + 
Sbjct: 4022 VAVNSGGKHCLALSSEGEVYSWGEAE---------DGKLGHG-NRSPCDRPR--VIESLR 4069

Query: 161  PRSQVSRSSGGTSSG-TDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
                V  ++GG  S      G      K R   L    +E            P LV    
Sbjct: 4070 GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLK--------PKLVEALQ 4121

Query: 220  GVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
            G R+  VA  +G   TL L+D   VW WG G  G+LG G                   G 
Sbjct: 4122 GHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-------------------GS 4162

Query: 278  DRSAALSRGSVNSEGPGFRVPGNY-------VKGIACGGRHSAVITDAGALLTFGWGLYG 330
            D               G +VP          V  + CG + S  +T +GA+ T+G G Y 
Sbjct: 4163 D---------------GCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4207

Query: 331  QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            + G GS D    P  V  L G ++  +A G  H +C + DG+VY +G N  GQLG G   
Sbjct: 4208 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTN 4267

Query: 391  AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
            A   PRL+ A  L+      V+CG+ HT           W  +K    G        +P+
Sbjct: 4268 AIQRPRLVAA--LQGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPA 4309

Query: 451  QVTIE 455
            QV +E
Sbjct: 4310 QVPME 4314



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 165/400 (41%), Gaps = 60/400 (15%)

Query: 53   GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
              G   A +   K+  WG  +D  Q     G   ++P      +  ++V+ A G     A
Sbjct: 2926 AAGLESAATIRTKVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 2984

Query: 113  VTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG- 171
            VT  G+VY  G      +GR+   +S+GT        RQ + L+  V  +  V+  SGG 
Sbjct: 2985 VTVEGKVYACGE---ATNGRLGLGISSGTV----PIPRQITALSSYVVKK--VAVHSGGR 3035

Query: 172  --TSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIAT 225
              T+   DG+    G G++G         K    S  + D+     P L+      RI  
Sbjct: 3036 HATALTVDGKVFSWGEGDDG---------KLGHFSRMNCDK-----PRLIEALKTKRIRD 3081

Query: 226  VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS-----RIRMVSSPHPIPCIESSYGKDRS 280
            +A G  H+ AL+  G+++ WG G  G+LG G      + +MV        I+ + G   +
Sbjct: 3082 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3141

Query: 281  AALS---RGSVNSEGPG-------------------FRVPGNYVKGIACGGRHSAVITDA 318
              L+    G V S G G                    R+ G  V  I CG + S  +T +
Sbjct: 3142 QTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3201

Query: 319  GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            G + T+G G Y + G GS      P  V  L G +I  VA G  H + ++  G VYA+G 
Sbjct: 3202 GVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGD 3261

Query: 379  NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
            N  GQ G G       P L+    LE      V+CG+ H+
Sbjct: 3262 NDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHS 3299



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 124/270 (45%), Gaps = 46/270 (17%)

Query: 233  TLALSDIGQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAALSRG---- 286
            TL+    G ++GWG+   GQLG   G+++++     P PC   +    R   L  G    
Sbjct: 3925 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKV-----PTPC--EALATLRPVQLIGGEQTL 3977

Query: 287  -SVNSEGPGF-------------------------RVPGNYVKGIAC--GGRHSAVITDA 318
             +V ++G  +                          +   ++K +A   GG+H   ++  
Sbjct: 3978 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4037

Query: 319  GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            G + ++G    G+ G G+      P  + SL GI++  VAAG  H+ C+++ GD+Y +G 
Sbjct: 4038 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGK 4097

Query: 379  NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGA--RHTAVIADDGKVFCWGWNKYG 436
             ++G+LG    + +  P+L++A  L+      V+CG+    T  + DD  V+ WG   YG
Sbjct: 4098 GRYGRLGHSDSEDQLKPKLVEA--LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYG 4155

Query: 437  QLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
            +LG G      +P ++ ++ G     V CG
Sbjct: 4156 KLGRGGSDGCKVPMKIDSLTGLGVVKVECG 4185



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 92/217 (42%), Gaps = 38/217 (17%)

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
           SS DE   A P LV    G+++  VA  +G   TLA+++ GQVW WG G  G+LG G   
Sbjct: 565 SSEDE---AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG--- 618

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITD 317
                                     GS   + P    ++    V  + CG + S  +T 
Sbjct: 619 --------------------------GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTK 652

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
            G + ++G G   + G G+ +    P  +  L G ++  VAAG  H + ++ D +V+++G
Sbjct: 653 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 712

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
            N   Q         T P     P L+  H   ++CG
Sbjct: 713 SND--QCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 747



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 83/310 (26%), Positives = 121/310 (39%), Gaps = 47/310 (15%)

Query: 57   AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEG 116
            A A++   K+ +WG  DD G+    S  + + P          I   A G +H  A+T  
Sbjct: 3037 ATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 3095

Query: 117  GEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGT 176
            GE+YTWG  E    GR  G     T L   + +        QV+  S+ +++   T  G 
Sbjct: 3096 GELYTWGLGE---YGR-LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3151

Query: 177  DGR-GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLA 235
                G G+ G   R              G E  +    +  LN G  +  +  G + +LA
Sbjct: 3152 VFSWGDGDFGKLGR-------------GGSEGCNIPQNIERLN-GQGVCQIECGAQFSLA 3197

Query: 236  LSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF 295
            L+  G VW WG G   +LG GS +  V  P  +                         G 
Sbjct: 3198 LTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQVVE------------------------GL 3232

Query: 296  RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
            R  G  +  +A G  H   +TDAG +  +G   +GQ G G+T     P  V  L G +I 
Sbjct: 3233 R--GKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKIT 3290

Query: 356  GVAAGLWHTI 365
             VA G  H++
Sbjct: 3291 RVACGSSHSV 3300



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 120/276 (43%), Gaps = 48/276 (17%)

Query: 205  DENLSAFPCLVTLNP---------GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG- 254
            +E+L+A P L + N          G  I   AAG      +    +V+ WG   + QLG 
Sbjct: 2895 EEDLAAVPFLASDNEEEEDEKGNSGSLIRKKAAGLESAATIR--TKVFVWGLNDKDQLGG 2952

Query: 255  -LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSA 313
              GS+I++            S+ +  SA                  N V+ +A G +   
Sbjct: 2953 LKGSKIKV-----------PSFSETLSAL-----------------NVVQ-VAGGSKSLF 2983

Query: 314  VITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVA--AGLWHTICISSD 370
             +T  G +   G    G+ G G +   +  P  +++L    ++ VA  +G  H   ++ D
Sbjct: 2984 AVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVD 3043

Query: 371  GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
            G V+++G    G+LG         PRL++A  L+    + ++CG+ H+A +   G+++ W
Sbjct: 3044 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEA--LKTKRIRDIACGSSHSAALTSSGELYTW 3101

Query: 431  GWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACG 465
            G  +YG+LG GD   +  P  V +  G     VACG
Sbjct: 3102 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3137



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 5/73 (6%)

Query: 53   GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
            G  F++A++ S  + TWG  D   LG     S  H   P          ++  A G  HC
Sbjct: 4185 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRRPRQVQGLQGKKVIAIATGSLHC 4241

Query: 111  VAVTEGGEVYTWG 123
            V  TE GEVYTWG
Sbjct: 4242 VCCTEDGEVYTWG 4254


>gi|410960762|ref|XP_003986956.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 1 [Felis
           catus]
          Length = 4837

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 129/255 (50%), Gaps = 29/255 (11%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           V+IA   + G H LAL+  G+V+ WG G  G+LG G  +     P   P + S++   ++
Sbjct: 497 VKIAA-HSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 550

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                             G +V  IACG  +SA IT  G L T+G G YG+ G GS++DE
Sbjct: 551 ------------------GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 592

Query: 341 LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
             P  V+ L G+++  VA  +G   T+ ++ +G V+++G   +G+LG GG      P+L+
Sbjct: 593 AIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLI 652

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGC 457
           +   L+++    V CG++ +  +  DG+V+ WG     +LG G       P  +  ++G 
Sbjct: 653 E--KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGK 710

Query: 458 VPRNVACGWWHTLLL 472
              +VA G  H L L
Sbjct: 711 KVIDVAAGSTHCLAL 725



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 128/303 (42%), Gaps = 80/303 (26%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GGRH  AL+  G+V+ WG G +G+LG  SR+     P  I  +++   +D  
Sbjct: 3048 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRD-- 3104

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                    IACG  HSA +T +G L T+G G YG+ G G    +
Sbjct: 3105 ------------------------IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ 3140

Query: 341  LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V  LLG ++  VA G     T+ ++ +G V+++G   FG+LG GG +   +P+ +
Sbjct: 3141 LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNI 3200

Query: 399  DAPSLE------------------------------------NVHSKS------------ 410
            +  + +                                    +VH +             
Sbjct: 3201 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI 3260

Query: 411  --VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWW 467
              V+ GA H   + D G+V+ WG N +GQ G G       P+ V  +EG     VACG  
Sbjct: 3261 VHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3320

Query: 468  HTL 470
            H++
Sbjct: 3321 HSV 3323



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 143/365 (39%), Gaps = 82/365 (22%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V   +G  HC+A++  GEVY+WG  E         D   G G ++   +R    + E + 
Sbjct: 4045 VAVNSGGKHCLALSSEGEVYSWGEAE---------DGKLGHG-NRSPCDRPR--VIESLR 4092

Query: 161  PRSQVSRSSGGTSSG-TDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
                V  ++GG  S      G      K R   L    +E            P LV    
Sbjct: 4093 GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLK--------PKLVEALQ 4144

Query: 220  GVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
            G  +  VA  +G   TL L+D   VW WG G  G+LG G                   G 
Sbjct: 4145 GHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-------------------GS 4185

Query: 278  DRSAALSRGSVNSEGPGFRVPGNY-------VKGIACGGRHSAVITDAGALLTFGWGLYG 330
            D               G +VP          V  + CG + S  +T +GA+ T+G G Y 
Sbjct: 4186 D---------------GCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4230

Query: 331  QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            + G GS D    P  V  L G ++  +A G  H +C + DG+VY +G N  GQLG G   
Sbjct: 4231 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTN 4290

Query: 391  AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
            A   PRL+ A  L+      V+CG+ HT           W  +K    G        +P+
Sbjct: 4291 AIQRPRLVAA--LQGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPA 4332

Query: 451  QVTIE 455
            QV +E
Sbjct: 4333 QVPME 4337



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 165/400 (41%), Gaps = 60/400 (15%)

Query: 53   GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
              G   A +   K+  WG  +D  Q     G   ++P      +  ++V+ A G     A
Sbjct: 2949 AAGLESAATIRTKVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 3007

Query: 113  VTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG- 171
            VT  G+VY  G      +GR+   +S+GT        RQ + L+  V  +  V+  SGG 
Sbjct: 3008 VTVEGKVYACGE---ATNGRLGLGISSGTV----PIPRQITALSSYVVKK--VAVHSGGR 3058

Query: 172  --TSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIAT 225
              T+   DG+    G G++G         K    S  + D+     P L+      RI  
Sbjct: 3059 HATALTVDGKVFSWGEGDDG---------KLGHFSRMNCDK-----PRLIEALKTKRIRD 3104

Query: 226  VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS-----RIRMVSSPHPIPCIESSYGKDRS 280
            +A G  H+ AL+  G+++ WG G  G+LG G      + +MV        I+ + G   +
Sbjct: 3105 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3164

Query: 281  AALS---RGSVNSEGPG-------------------FRVPGNYVKGIACGGRHSAVITDA 318
              L+    G V S G G                    R+ G  V  I CG + S  +T +
Sbjct: 3165 QTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3224

Query: 319  GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            G + T+G G Y + G GS      P  V  L G +I  VA G  H + ++  G VYA+G 
Sbjct: 3225 GVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGD 3284

Query: 379  NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
            N  GQ G G       P L+    LE      V+CG+ H+
Sbjct: 3285 NDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHS 3322



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/270 (26%), Positives = 125/270 (46%), Gaps = 46/270 (17%)

Query: 233  TLALSDIGQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAALSRG---- 286
            TL+    G ++GWG+   GQLG   G+++++     P PC   +    R   L  G    
Sbjct: 3948 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKV-----PTPC--EALATLRPVQLIGGEQTL 4000

Query: 287  -SVNSEGPGF-------------------------RVPGNYVKGIAC--GGRHSAVITDA 318
             +V ++G  +                          +   ++K +A   GG+H   ++  
Sbjct: 4001 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4060

Query: 319  GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            G + ++G    G+ G G+      P  + SL GI++  VAAG  H+ C+++ GD+Y +G 
Sbjct: 4061 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGK 4120

Query: 379  NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGA--RHTAVIADDGKVFCWGWNKYG 436
             ++G+LG    + +  P+L++A  L+  H   V+CG+    T  + DD  V+ WG   YG
Sbjct: 4121 GRYGRLGHSDSEDQLKPKLVEA--LQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYG 4178

Query: 437  QLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
            +LG G      +P ++ ++ G     V CG
Sbjct: 4179 KLGRGGSDGCKVPMKIDSLTGLGVVKVECG 4208



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 92/217 (42%), Gaps = 38/217 (17%)

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
           SS DE   A P LV    G+++  VA  +G   TLA+++ GQVW WG G  G+LG G   
Sbjct: 588 SSEDE---AIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG--- 641

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITD 317
                                     GS   + P    ++    V  + CG + S  +T 
Sbjct: 642 --------------------------GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTK 675

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
            G + ++G G   + G G+ +    P  +  L G ++  VAAG  H + ++ D +V+++G
Sbjct: 676 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
            N   Q         T P     P L+  H   ++CG
Sbjct: 736 SND--QCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 770



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 83/310 (26%), Positives = 121/310 (39%), Gaps = 47/310 (15%)

Query: 57   AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEG 116
            A A++   K+ +WG  DD G+    S  + + P          I   A G +H  A+T  
Sbjct: 3060 ATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 3118

Query: 117  GEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGT 176
            GE+YTWG  E    GR  G     T L   + +        QV+  S+ +++   T  G 
Sbjct: 3119 GELYTWGLGE---YGR-LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174

Query: 177  DGR-GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLA 235
                G G+ G   R              G E  +    +  LN G  +  +  G + +LA
Sbjct: 3175 VFSWGDGDFGKLGR-------------GGSEGCNIPQNIERLN-GQGVCQIECGAQFSLA 3220

Query: 236  LSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF 295
            L+  G VW WG G   +LG GS +  V  P  +                         G 
Sbjct: 3221 LTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQVVE------------------------GL 3255

Query: 296  RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
            R  G  +  +A G  H   +TDAG +  +G   +GQ G G+T     P  V  L G +I 
Sbjct: 3256 R--GKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKIT 3313

Query: 356  GVAAGLWHTI 365
             VA G  H++
Sbjct: 3314 RVACGSSHSV 3323



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 120/276 (43%), Gaps = 48/276 (17%)

Query: 205  DENLSAFPCLVTLNP---------GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG- 254
            +E+L+A P L + N          G  I   AAG      +    +V+ WG   + QLG 
Sbjct: 2918 EEDLAAVPFLASDNEEEEDEKGNSGSLIRKKAAGLESAATIR--TKVFVWGLNDKDQLGG 2975

Query: 255  -LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSA 313
              GS+I++            S+ +  SA                  N V+ +A G +   
Sbjct: 2976 LKGSKIKV-----------PSFSETLSAL-----------------NVVQ-VAGGSKSLF 3006

Query: 314  VITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVA--AGLWHTICISSD 370
             +T  G +   G    G+ G G +   +  P  +++L    ++ VA  +G  H   ++ D
Sbjct: 3007 AVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVD 3066

Query: 371  GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
            G V+++G    G+LG         PRL++A  L+    + ++CG+ H+A +   G+++ W
Sbjct: 3067 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEA--LKTKRIRDIACGSSHSAALTSSGELYTW 3124

Query: 431  GWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACG 465
            G  +YG+LG GD   +  P  V +  G     VACG
Sbjct: 3125 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3160



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 5/73 (6%)

Query: 53   GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
            G  F++A++ S  + TWG  D   LG     S  H   P          ++  A G  HC
Sbjct: 4208 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRRPRQVQGLQGKKVIAIATGSLHC 4264

Query: 111  VAVTEGGEVYTWG 123
            V  TE GEVYTWG
Sbjct: 4265 VCCTEDGEVYTWG 4277


>gi|198462494|ref|XP_002135307.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
 gi|198150848|gb|EDY73934.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
          Length = 1052

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 128/295 (43%), Gaps = 38/295 (12%)

Query: 211 FPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP- 269
            P  +   P   +  +A G RHTL L+  GQV+  G     QLG     +    P PIP 
Sbjct: 26  LPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACGNNDHHQLGHELPTK---RPLPIPE 82

Query: 270 -----CIESSYGKDRSAALSR-GSVNSEGPG---------------------FRVPGNYV 302
                 I+ + G   S AL+  G + S G                       F V    V
Sbjct: 83  LQAYVVIQIACGSRHSMALTEWGQILSWGDNDCGQVGHSTDNDVIELPKILRFLVSRTVV 142

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNC---VSSLLGIQIEGVAA 359
           + IACG  HS  +T  G L ++G  +YGQ G  S  D    N    ++++LGI +  +A 
Sbjct: 143 Q-IACGNNHSLALTSCGELYSWGSNIYGQLGVQSPKDLPHSNAPLRLTTILGIPLATIAC 201

Query: 360 GLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
           G  H+  IS    V+ +G N  GQLG   +Q    P  L   S+  +  + V+CG  ++ 
Sbjct: 202 GGNHSFLISKSSAVFGWGKNTCGQLGLNDEQNRAYPSQLK--SMRTLGVRFVTCGDEYSV 259

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLA 473
            + ++G VF  G   YGQLG G   +  IP  V  + G     VACG  HTL L 
Sbjct: 260 FLTNEGGVFTCGAGNYGQLGHGASNNEMIPRMVIELMGSTITQVACGNRHTLALV 314



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 97/324 (29%), Positives = 147/324 (45%), Gaps = 55/324 (16%)

Query: 87  EIP--EPFPLPTEAS--IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTG 142
           E+P   P P+P   +  +++ A G  H +A+TE G++ +WG  +C   G+V      G  
Sbjct: 71  ELPTKRPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWGDNDC---GQV------GHS 121

Query: 143 LDKDVFE--RQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRI--SLAKQTA 198
            D DV E  +   FL  +      V + + G +        GE  S    I   L  Q  
Sbjct: 122 TDNDVIELPKILRFLVSRT-----VVQIACGNNHSLALTSCGELYSWGSNIYGQLGVQ-- 174

Query: 199 ESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR 258
              S  D   S  P  +T   G+ +AT+A GG H+  +S    V+GWG    GQLGL   
Sbjct: 175 ---SPKDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCGQLGLNDE 231

Query: 259 IRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDA 318
                             ++R+      S+ + G         V+ + CG  +S  +T+ 
Sbjct: 232 ------------------QNRAYPSQLKSMRTLG---------VRFVTCGDEYSVFLTNE 264

Query: 319 GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFG 377
           G + T G G YGQ G G++++E+ P  V  L+G  I  VA G  HT+  + S G VY+FG
Sbjct: 265 GGVFTCGAGNYGQLGHGASNNEMIPRMVIELMGSTITQVACGNRHTLALVPSGGRVYSFG 324

Query: 378 GNQFGQLGTGGDQAETLPRLLDAP 401
               GQLGT    ++TLP+++  P
Sbjct: 325 LGASGQLGTRNTISQTLPKVVIGP 348



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 122/254 (48%), Gaps = 33/254 (12%)

Query: 203 SGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMV 262
           S D ++   P ++       +  +A G  H+LAL+  G+++ WG    GQLG       V
Sbjct: 121 STDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWGSNIYGQLG-------V 173

Query: 263 SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL 322
            SP  +P          S A  R +         + G  +  IACGG HS +I+ + A+ 
Sbjct: 174 QSPKDLP---------HSNAPLRLTT--------ILGIPLATIACGGNHSFLISKSSAV- 215

Query: 323 TFGWGLYGQCGQGSTDDELS---PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN 379
            FGWG    CGQ   +DE +   P+ + S+  + +  V  G  +++ ++++G V+  G  
Sbjct: 216 -FGWG-KNTCGQLGLNDEQNRAYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAG 273

Query: 380 QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQL 438
            +GQLG G    E +PR++    L       V+CG RHT A++   G+V+ +G    GQL
Sbjct: 274 NYGQLGHGASNNEMIPRMV--IELMGSTITQVACGNRHTLALVPSGGRVYSFGLGASGQL 331

Query: 439 GLGDVIDRNIPSQV 452
           G  + I + +P  V
Sbjct: 332 GTRNTISQTLPKVV 345



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 10/158 (6%)

Query: 320 ALLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
           AL  +G   +GQ G G  ++E  L P+ +       ++ +A G  HT+ ++++G VYA G
Sbjct: 2   ALYCWGDASHGQLGLGGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACG 61

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQ 437
            N   QLG        LP     P L+      ++CG+RH+  + + G++  WG N  GQ
Sbjct: 62  NNDHHQLGHELPTKRPLP----IPELQAYVVIQIACGSRHSMALTEWGQILSWGDNDCGQ 117

Query: 438 LGL---GDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           +G     DVI+     +  +   V + +ACG  H+L L
Sbjct: 118 VGHSTDNDVIELPKILRFLVSRTVVQ-IACGNNHSLAL 154



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 78/328 (23%), Positives = 131/328 (39%), Gaps = 59/328 (17%)

Query: 24  LPQRSPILSPLVVRLPLTVGSAWRDVCGGGCG--FAMAISDSRKLITWGSTD--DLGQSY 79
           LP + P        LP+    A+  V    CG   +MA+++  ++++WG  D   +G S 
Sbjct: 72  LPTKRP--------LPIPELQAYV-VIQIACGSRHSMALTEWGQILSWGDNDCGQVGHS- 121

Query: 80  VTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLST 139
            T     E+P+        ++V+ A G  H +A+T  GE+Y+WG         ++G L  
Sbjct: 122 -TDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWG-------SNIYGQL-- 171

Query: 140 GTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAE 199
           G    KD+    +      +      + + GG  S    + S   G         K T  
Sbjct: 172 GVQSPKDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFG-------WGKNTCG 224

Query: 200 SSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
                DE   A+P  +     + +  V  G  +++ L++ G V+  G G  GQLG G+  
Sbjct: 225 QLGLNDEQNRAYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQLGHGA-- 282

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHS-AVITDA 318
              S+   IP +                         + G+ +  +ACG RH+ A++   
Sbjct: 283 ---SNNEMIPRM----------------------VIELMGSTITQVACGNRHTLALVPSG 317

Query: 319 GALLTFGWGLYGQCGQGSTDDELSPNCV 346
           G + +FG G  GQ G  +T  +  P  V
Sbjct: 318 GRVYSFGLGASGQLGTRNTISQTLPKVV 345


>gi|301787735|ref|XP_002929284.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
           [Ailuropoda melanoleuca]
          Length = 4837

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 129/255 (50%), Gaps = 29/255 (11%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++IA   + G H LAL+  G+V+ WG G  G+LG G  +     P   P + S++   ++
Sbjct: 497 IKIAA-HSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 550

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                             G +V  IACG  +SA IT  G L T+G G YG+ G GS++DE
Sbjct: 551 ------------------GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 592

Query: 341 LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
             P  V+ L G+++  VA  +G   T+ ++ +G V+++G   +G+LG GG      P+L+
Sbjct: 593 AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLI 652

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGC 457
           +   L+++    V CG++ +  +  DG+V+ WG     +LG G       P  +  ++G 
Sbjct: 653 E--KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGK 710

Query: 458 VPRNVACGWWHTLLL 472
              +VA G  H L L
Sbjct: 711 KVIDVAAGSTHCLAL 725



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 128/303 (42%), Gaps = 80/303 (26%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GGRH  AL+  G+V+ WG G +G+LG  SR+     P  I  +++   +D  
Sbjct: 3048 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRD-- 3104

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                    IACG  HSA +T +G L T+G G YG+ G G    +
Sbjct: 3105 ------------------------IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ 3140

Query: 341  LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V  LLG ++  VA G     T+ ++ +G V+++G   FG+LG GG +   +P+ +
Sbjct: 3141 LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNI 3200

Query: 399  DAPSLE------------------------------------NVHSKS------------ 410
            +  + +                                    +VH +             
Sbjct: 3201 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI 3260

Query: 411  --VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWW 467
              V+ GA H   + D G+V+ WG N +GQ G G       P+ V  +EG     VACG  
Sbjct: 3261 VHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3320

Query: 468  HTL 470
            H++
Sbjct: 3321 HSV 3323



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 144/365 (39%), Gaps = 82/365 (22%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V   +G  HC+A++  GEVY+WG  E         D   G G ++   +R    + E + 
Sbjct: 4045 VAVNSGGKHCLALSSEGEVYSWGEAE---------DGKLGHG-NRSPCDRPR--VIESLR 4092

Query: 161  PRSQVSRSSGGTSSG-TDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
                V  ++GG  S      G      K R   L    +E            P LV    
Sbjct: 4093 GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLK--------PKLVEALQ 4144

Query: 220  GVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
            G R+  VA  +G   TL L+D   VW WG G  G+LG G                   G 
Sbjct: 4145 GHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-------------------GS 4185

Query: 278  DRSAALSRGSVNSEGPGFRVPGNY-------VKGIACGGRHSAVITDAGALLTFGWGLYG 330
            D               G +VP          V  + CG + S  +T +GA+ T+G G Y 
Sbjct: 4186 D---------------GCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4230

Query: 331  QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            + G GS D    P  V  L G ++  +A G  H +C + DG+VY +G N  GQLG G   
Sbjct: 4231 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTN 4290

Query: 391  AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
            A   PRL+ A  L+      V+CG+ HT           W  +K    G        +P+
Sbjct: 4291 AIQRPRLVAA--LQGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPA 4332

Query: 451  QVTIE 455
            QV +E
Sbjct: 4333 QVPME 4337



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 165/400 (41%), Gaps = 60/400 (15%)

Query: 53   GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
              G   A +   K+  WG  +D  Q     G   ++P      +  ++V+ A G     A
Sbjct: 2949 AAGLESAATIRTKVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 3007

Query: 113  VTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG- 171
            VT  G+VY  G      +GR+   +S+GT        RQ + L+  V  +  V+  SGG 
Sbjct: 3008 VTVEGKVYACGE---ATNGRLGLGISSGTV----PIPRQITALSSYVVKK--VAVHSGGR 3058

Query: 172  --TSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIAT 225
              T+   DG+    G G++G         K    S  + D+     P L+      RI  
Sbjct: 3059 HATALTVDGKVFSWGEGDDG---------KLGHFSRMNCDK-----PRLIEALKTKRIRD 3104

Query: 226  VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS-----RIRMVSSPHPIPCIESSYGKDRS 280
            +A G  H+ AL+  G+++ WG G  G+LG G      + +MV        I+ + G   +
Sbjct: 3105 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3164

Query: 281  AALS---RGSVNSEGPG-------------------FRVPGNYVKGIACGGRHSAVITDA 318
              L+    G V S G G                    R+ G  V  I CG + S  +T +
Sbjct: 3165 QTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3224

Query: 319  GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            G + T+G G Y + G GS      P  V  L G +I  VA G  H + ++  G VYA+G 
Sbjct: 3225 GVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGD 3284

Query: 379  NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
            N  GQ G G       P L+    LE      V+CG+ H+
Sbjct: 3285 NDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHS 3322



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 124/270 (45%), Gaps = 46/270 (17%)

Query: 233  TLALSDIGQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAALSRG---- 286
            TL+    G ++GWG+   GQLG   G+++++     P PC   +    R   L  G    
Sbjct: 3948 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKV-----PTPC--EALATLRPVQLIGGEQTL 4000

Query: 287  -SVNSEGPGF-------------------------RVPGNYVKGIAC--GGRHSAVITDA 318
             +V ++G  +                          +   ++K +A   GG+H   ++  
Sbjct: 4001 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4060

Query: 319  GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            G + ++G    G+ G G+      P  + SL GI++  VAAG  H+ C+++ GD+Y +G 
Sbjct: 4061 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGK 4120

Query: 379  NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGA--RHTAVIADDGKVFCWGWNKYG 436
             ++G+LG    + +  P+L++A  L+      V+CG+    T  + DD  V+ WG   YG
Sbjct: 4121 GRYGRLGHSDSEDQLKPKLVEA--LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYG 4178

Query: 437  QLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
            +LG G      +P ++ ++ G     V CG
Sbjct: 4179 KLGRGGSDGCKVPMKIDSLTGLGVVKVECG 4208



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 92/217 (42%), Gaps = 38/217 (17%)

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
           SS DE   A P LV    G+++  VA  +G   TLA+++ GQVW WG G  G+LG G   
Sbjct: 588 SSEDE---AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG--- 641

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITD 317
                                     GS   + P    ++    V  + CG + S  +T 
Sbjct: 642 --------------------------GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTK 675

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
            G + ++G G   + G G+ +    P  +  L G ++  VAAG  H + ++ D +V+++G
Sbjct: 676 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
            N   Q         T P     P L+  H   ++CG
Sbjct: 736 SND--QCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 770



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 83/310 (26%), Positives = 121/310 (39%), Gaps = 47/310 (15%)

Query: 57   AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEG 116
            A A++   K+ +WG  DD G+    S  + + P          I   A G +H  A+T  
Sbjct: 3060 ATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 3118

Query: 117  GEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGT 176
            GE+YTWG  E    GR  G     T L   + +        QV+  S+ +++   T  G 
Sbjct: 3119 GELYTWGLGE---YGR-LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174

Query: 177  DGR-GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLA 235
                G G+ G   R              G E  +    +  LN G  +  +  G + +LA
Sbjct: 3175 VFSWGDGDFGKLGR-------------GGSEGCNIPQNIERLN-GQGVCQIECGAQFSLA 3220

Query: 236  LSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF 295
            L+  G VW WG G   +LG GS +  V  P  +                         G 
Sbjct: 3221 LTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQVVE------------------------GL 3255

Query: 296  RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
            R  G  +  +A G  H   +TDAG +  +G   +GQ G G+T     P  V  L G +I 
Sbjct: 3256 R--GKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKIT 3313

Query: 356  GVAAGLWHTI 365
             VA G  H++
Sbjct: 3314 RVACGSSHSV 3323



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 120/276 (43%), Gaps = 48/276 (17%)

Query: 205  DENLSAFPCLVTLNP---------GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG- 254
            +E+L+A P L + N          G  I   AAG      +    +V+ WG   + QLG 
Sbjct: 2918 EEDLAAVPFLASDNEEEEDEKGNSGSLIRKKAAGLESAATIR--TKVFVWGLNDKDQLGG 2975

Query: 255  -LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSA 313
              GS+I++            S+ +  SA                  N V+ +A G +   
Sbjct: 2976 LKGSKIKV-----------PSFSETLSAL-----------------NVVQ-VAGGSKSLF 3006

Query: 314  VITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVA--AGLWHTICISSD 370
             +T  G +   G    G+ G G +   +  P  +++L    ++ VA  +G  H   ++ D
Sbjct: 3007 AVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVD 3066

Query: 371  GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
            G V+++G    G+LG         PRL++A  L+    + ++CG+ H+A +   G+++ W
Sbjct: 3067 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEA--LKTKRIRDIACGSSHSAALTSSGELYTW 3124

Query: 431  GWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACG 465
            G  +YG+LG GD   +  P  V +  G     VACG
Sbjct: 3125 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3160



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 5/73 (6%)

Query: 53   GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
            G  F++A++ S  + TWG  D   LG     S  H   P          ++  A G  HC
Sbjct: 4208 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRRPRQVQGLQGKKVIAIATGSLHC 4264

Query: 111  VAVTEGGEVYTWG 123
            V  TE GEVYTWG
Sbjct: 4265 VCCTEDGEVYTWG 4277


>gi|410960764|ref|XP_003986957.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 2 [Felis
           catus]
          Length = 4844

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 129/255 (50%), Gaps = 29/255 (11%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           V+IA   + G H LAL+  G+V+ WG G  G+LG G  +     P   P + S++   ++
Sbjct: 497 VKIAA-HSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 550

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                             G +V  IACG  +SA IT  G L T+G G YG+ G GS++DE
Sbjct: 551 ------------------GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 592

Query: 341 LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
             P  V+ L G+++  VA  +G   T+ ++ +G V+++G   +G+LG GG      P+L+
Sbjct: 593 AIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLI 652

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGC 457
           +   L+++    V CG++ +  +  DG+V+ WG     +LG G       P  +  ++G 
Sbjct: 653 E--KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGK 710

Query: 458 VPRNVACGWWHTLLL 472
              +VA G  H L L
Sbjct: 711 KVIDVAAGSTHCLAL 725



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 128/303 (42%), Gaps = 80/303 (26%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GGRH  AL+  G+V+ WG G +G+LG  SR+     P  I  +++   +D  
Sbjct: 3055 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRD-- 3111

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                    IACG  HSA +T +G L T+G G YG+ G G    +
Sbjct: 3112 ------------------------IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ 3147

Query: 341  LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V  LLG ++  VA G     T+ ++ +G V+++G   FG+LG GG +   +P+ +
Sbjct: 3148 LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNI 3207

Query: 399  DAPSLE------------------------------------NVHSKS------------ 410
            +  + +                                    +VH +             
Sbjct: 3208 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI 3267

Query: 411  --VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWW 467
              V+ GA H   + D G+V+ WG N +GQ G G       P+ V  +EG     VACG  
Sbjct: 3268 VHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3327

Query: 468  HTL 470
            H++
Sbjct: 3328 HSV 3330



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 143/365 (39%), Gaps = 82/365 (22%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V   +G  HC+A++  GEVY+WG  E         D   G G ++   +R    + E + 
Sbjct: 4052 VAVNSGGKHCLALSSEGEVYSWGEAE---------DGKLGHG-NRSPCDRPR--VIESLR 4099

Query: 161  PRSQVSRSSGGTSSG-TDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
                V  ++GG  S      G      K R   L    +E            P LV    
Sbjct: 4100 GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLK--------PKLVEALQ 4151

Query: 220  GVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
            G  +  VA  +G   TL L+D   VW WG G  G+LG G                   G 
Sbjct: 4152 GHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-------------------GS 4192

Query: 278  DRSAALSRGSVNSEGPGFRVPGNY-------VKGIACGGRHSAVITDAGALLTFGWGLYG 330
            D               G +VP          V  + CG + S  +T +GA+ T+G G Y 
Sbjct: 4193 D---------------GCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4237

Query: 331  QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            + G GS D    P  V  L G ++  +A G  H +C + DG+VY +G N  GQLG G   
Sbjct: 4238 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTN 4297

Query: 391  AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
            A   PRL+ A  L+      V+CG+ HT           W  +K    G        +P+
Sbjct: 4298 AIQRPRLVAA--LQGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPA 4339

Query: 451  QVTIE 455
            QV +E
Sbjct: 4340 QVPME 4344



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 165/400 (41%), Gaps = 60/400 (15%)

Query: 53   GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
              G   A +   K+  WG  +D  Q     G   ++P      +  ++V+ A G     A
Sbjct: 2956 AAGLESAATIRTKVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 3014

Query: 113  VTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG- 171
            VT  G+VY  G      +GR+   +S+GT        RQ + L+  V  +  V+  SGG 
Sbjct: 3015 VTVEGKVYACGE---ATNGRLGLGISSGTV----PIPRQITALSSYVVKK--VAVHSGGR 3065

Query: 172  --TSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIAT 225
              T+   DG+    G G++G         K    S  + D+     P L+      RI  
Sbjct: 3066 HATALTVDGKVFSWGEGDDG---------KLGHFSRMNCDK-----PRLIEALKTKRIRD 3111

Query: 226  VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS-----RIRMVSSPHPIPCIESSYGKDRS 280
            +A G  H+ AL+  G+++ WG G  G+LG G      + +MV        I+ + G   +
Sbjct: 3112 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3171

Query: 281  AALS---RGSVNSEGPG-------------------FRVPGNYVKGIACGGRHSAVITDA 318
              L+    G V S G G                    R+ G  V  I CG + S  +T +
Sbjct: 3172 QTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3231

Query: 319  GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            G + T+G G Y + G GS      P  V  L G +I  VA G  H + ++  G VYA+G 
Sbjct: 3232 GVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGD 3291

Query: 379  NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
            N  GQ G G       P L+    LE      V+CG+ H+
Sbjct: 3292 NDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHS 3329



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/270 (26%), Positives = 125/270 (46%), Gaps = 46/270 (17%)

Query: 233  TLALSDIGQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAALSRG---- 286
            TL+    G ++GWG+   GQLG   G+++++     P PC   +    R   L  G    
Sbjct: 3955 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKV-----PTPC--EALATLRPVQLIGGEQTL 4007

Query: 287  -SVNSEGPGF-------------------------RVPGNYVKGIAC--GGRHSAVITDA 318
             +V ++G  +                          +   ++K +A   GG+H   ++  
Sbjct: 4008 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4067

Query: 319  GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            G + ++G    G+ G G+      P  + SL GI++  VAAG  H+ C+++ GD+Y +G 
Sbjct: 4068 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGK 4127

Query: 379  NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGA--RHTAVIADDGKVFCWGWNKYG 436
             ++G+LG    + +  P+L++A  L+  H   V+CG+    T  + DD  V+ WG   YG
Sbjct: 4128 GRYGRLGHSDSEDQLKPKLVEA--LQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYG 4185

Query: 437  QLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
            +LG G      +P ++ ++ G     V CG
Sbjct: 4186 KLGRGGSDGCKVPMKIDSLTGLGVVKVECG 4215



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 92/217 (42%), Gaps = 38/217 (17%)

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
           SS DE   A P LV    G+++  VA  +G   TLA+++ GQVW WG G  G+LG G   
Sbjct: 588 SSEDE---AIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG--- 641

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITD 317
                                     GS   + P    ++    V  + CG + S  +T 
Sbjct: 642 --------------------------GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTK 675

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
            G + ++G G   + G G+ +    P  +  L G ++  VAAG  H + ++ D +V+++G
Sbjct: 676 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
            N   Q         T P     P L+  H   ++CG
Sbjct: 736 SND--QCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 770



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 83/310 (26%), Positives = 121/310 (39%), Gaps = 47/310 (15%)

Query: 57   AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEG 116
            A A++   K+ +WG  DD G+    S  + + P          I   A G +H  A+T  
Sbjct: 3067 ATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 3125

Query: 117  GEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGT 176
            GE+YTWG  E    GR  G     T L   + +        QV+  S+ +++   T  G 
Sbjct: 3126 GELYTWGLGE---YGR-LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3181

Query: 177  DGR-GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLA 235
                G G+ G   R              G E  +    +  LN G  +  +  G + +LA
Sbjct: 3182 VFSWGDGDFGKLGR-------------GGSEGCNIPQNIERLN-GQGVCQIECGAQFSLA 3227

Query: 236  LSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF 295
            L+  G VW WG G   +LG GS +  V  P  +                         G 
Sbjct: 3228 LTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQVVE------------------------GL 3262

Query: 296  RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
            R  G  +  +A G  H   +TDAG +  +G   +GQ G G+T     P  V  L G +I 
Sbjct: 3263 R--GKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKIT 3320

Query: 356  GVAAGLWHTI 365
             VA G  H++
Sbjct: 3321 RVACGSSHSV 3330



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 120/276 (43%), Gaps = 48/276 (17%)

Query: 205  DENLSAFPCLVTLNP---------GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG- 254
            +E+L+A P L + N          G  I   AAG      +    +V+ WG   + QLG 
Sbjct: 2925 EEDLAAVPFLASDNEEEEDEKGNSGSLIRKKAAGLESAATIR--TKVFVWGLNDKDQLGG 2982

Query: 255  -LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSA 313
              GS+I++            S+ +  SA                  N V+ +A G +   
Sbjct: 2983 LKGSKIKV-----------PSFSETLSAL-----------------NVVQ-VAGGSKSLF 3013

Query: 314  VITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVA--AGLWHTICISSD 370
             +T  G +   G    G+ G G +   +  P  +++L    ++ VA  +G  H   ++ D
Sbjct: 3014 AVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVD 3073

Query: 371  GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
            G V+++G    G+LG         PRL++A  L+    + ++CG+ H+A +   G+++ W
Sbjct: 3074 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEA--LKTKRIRDIACGSSHSAALTSSGELYTW 3131

Query: 431  GWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACG 465
            G  +YG+LG GD   +  P  V +  G     VACG
Sbjct: 3132 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3167



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 5/73 (6%)

Query: 53   GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
            G  F++A++ S  + TWG  D   LG     S  H   P          ++  A G  HC
Sbjct: 4215 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRRPRQVQGLQGKKVIAIATGSLHC 4271

Query: 111  VAVTEGGEVYTWG 123
            V  TE GEVYTWG
Sbjct: 4272 VCCTEDGEVYTWG 4284


>gi|395501384|ref|XP_003755075.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Sarcophilus harrisii]
          Length = 1049

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/260 (33%), Positives = 121/260 (46%), Gaps = 34/260 (13%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGL---GSRIRM---VSSPHPIPCIESSYG 276
           I  V+ G  HTLAL+D GQV+ WG   +GQLGL      IR+   + S   I  ++ + G
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACG 145

Query: 277 KDRSAALSRGS------VNSEGP---GFRVP------------GNYVKGIACGGRHSAVI 315
              S ALS+GS       N  G    GF +             G     +A GG HS V+
Sbjct: 146 YYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVL 205

Query: 316 TDAGALLTFGWGL--YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDV 373
           T +GA+  FGWG   +GQ G    +D   PN + SL   +I  +  G  HT  ++ +G V
Sbjct: 206 TLSGAI--FGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263

Query: 374 YAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGW 432
           + FG   +GQLG      E  PR      L       ++CG +HT A +   G+++ +G 
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPR--KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGL 321

Query: 433 NKYGQLGLGDVIDRNIPSQV 452
              GQLG G   +R  P  V
Sbjct: 322 GGNGQLGTGSTSNRKSPFTV 341



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 131/294 (44%), Gaps = 34/294 (11%)

Query: 205 DENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSS 264
           DE +   P         ++  V  G RHT+ + D G V+  G    GQLG     +    
Sbjct: 18  DEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---HEKSRKK 74

Query: 265 PHPIPCIES------SYGKDRSAALS-RGSVNSEG---------PG----FRVPGNY--- 301
           P  +  +++      S G+  + AL+ +G V + G         PG     RVP N    
Sbjct: 75  PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSL 134

Query: 302 ----VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDELSPNCVSSLLGIQIEG 356
               +  IACG  HS  ++    + ++G   +GQ G G     + SP  + SLLGI    
Sbjct: 135 TDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQ 194

Query: 357 VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR 416
           VAAG  H+  ++  G ++ +G N+FGQLG   +    +P LL   SL +     + CG  
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLK--SLRSQKIVYICCGED 252

Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
           HTA +  +G VF +G   YGQLG         P +V  + G +   +ACG  HT
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  VQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLGT-GGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    ++CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPR--NIKSLTDIQIVQIACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VF WG NK+GQLGLG  + R    Q+  ++ G     VA G  H+ +L +
Sbjct: 152 LSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTL 207



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/160 (34%), Positives = 83/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      +  +++ V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDTDGQL 116

Query: 439 GLGDV-----IDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      +ACG++H+L L+
Sbjct: 117 GLPGTEEYIRVPRNIKSLTDIQIV---QIACGYYHSLALS 153



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 83/307 (27%), Positives = 129/307 (42%), Gaps = 54/307 (17%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D       + ++  +P      T+  IV+ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSS-FLTEQV--SP 161
            G+ H +A+++G EV++WG  +        G L  G  L     +RQSS  L + +   P
Sbjct: 144 CGYYHSLALSKGSEVFSWGQNK-------HGQLGLGFEL-----KRQSSPQLIKSLLGIP 191

Query: 162 RSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGV 221
            +QV  ++GG  S          G  R +              DEN    P L+      
Sbjct: 192 FTQV--AAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRFVPNLLKSLRSQ 242

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
           +I  +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +             
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV------------- 288

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                        F + G+ V  IACG +H SA +  +G + +FG G  GQ G GST + 
Sbjct: 289 -------------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNR 335

Query: 341 LSPNCVS 347
            SP  V 
Sbjct: 336 KSPFTVK 342



 Score = 42.7 bits (99), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 56/244 (22%), Positives = 96/244 (39%), Gaps = 59/244 (24%)

Query: 36  VRLPLTVGSAWR-DVCGGGCGF--AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPF 92
           +R+P  + S     +    CG+  ++A+S   ++ +WG             KHG++   F
Sbjct: 125 IRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQ-----------NKHGQLGLGF 173

Query: 93  PLPTEAS-----------IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGT 141
            L  ++S             + AAG AH   +T  G ++ WG  +       FG L    
Sbjct: 174 ELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNK-------FGQLGLND 226

Query: 142 GLDKDVFERQSSFLTEQV-------SPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLA 194
             D+ V     S  ++++          + +++  G  + G  G G              
Sbjct: 227 ENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYG-------------- 272

Query: 195 KQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLAL-SDIGQVWGWGYGGEGQL 253
            Q   +S+S + N    P  V    G  +  +A G +HT A     G+++ +G GG GQL
Sbjct: 273 -QLGHNSTSHEIN----PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQL 327

Query: 254 GLGS 257
           G GS
Sbjct: 328 GTGS 331


>gi|224079652|ref|XP_002305904.1| predicted protein [Populus trichocarpa]
 gi|222848868|gb|EEE86415.1| predicted protein [Populus trichocarpa]
          Length = 1078

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/258 (31%), Positives = 120/258 (46%), Gaps = 41/258 (15%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           GV I+ VA G  HT A+S  GQ++ +G G  G LG G+ ++ VS P  +  ++       
Sbjct: 411 GVSISNVACGDWHTAAVSSSGQLFTYGDGTFGVLGHGN-LQSVSHPKEVESLK------- 462

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDA-----------GALLTFGWGL 328
                              G +VK +ACG  H+A I D            G L T+G G 
Sbjct: 463 -------------------GLWVKSVACGSWHTAAIVDVIFDRFKFNGVGGKLFTWGDGD 503

Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGG 388
            G+ G    + +L P CV+ L+      V+ G   T+ ++  G +Y  G +  GQLG   
Sbjct: 504 KGRLGHADLEKKLQPTCVAQLVEHDFVQVSCGRMLTVALTRTGKIYTMGSSVHGQLG--N 561

Query: 389 DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNI 448
            QA+     +    L+    K +S G+ H A +   G V+ WG    GQLGLG+V DRN+
Sbjct: 562 PQAKNKSIAIVEGKLKEEFVKEISSGSYHVAALTSGGSVYTWGKGTNGQLGLGNVEDRNV 621

Query: 449 PSQV-TIEGCVPRNVACG 465
           P+ V  +     +++ACG
Sbjct: 622 PTLVEALRDRQVQSIACG 639



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 125/282 (44%), Gaps = 50/282 (17%)

Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM-VSSPHP 267
           S  P L+     + +  ++ G  H   ++  G+V+ WG G  G+  LG ++ M VSSP  
Sbjct: 293 SLLPKLLEPTVMLDVRNISLGRNHAALITKRGEVFCWGEGSRGK--LGHKVDMDVSSPTI 350

Query: 268 IPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWG 327
           +  ++                          G  VK +ACG   +  +TD+G L  +G  
Sbjct: 351 VESLD--------------------------GFLVKFVACGEYQTCALTDSGELFVWGEN 384

Query: 328 LYG---QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQL 384
            YG    C + +    L       L G+ I  VA G WHT  +SS G ++ +G   FG L
Sbjct: 385 KYGGNLVCEERTGSQWLPRQISGPLAGVSISNVACGDWHTAAVSSSGQLFTYGDGTFGVL 444

Query: 385 GTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD-----------DGKVFCWGWN 433
           G G  Q+ + P+  +  SL+ +  KSV+CG+ HTA I D            GK+F WG  
Sbjct: 445 GHGNLQSVSHPK--EVESLKGLWVKSVACGSWHTAAIVDVIFDRFKFNGVGGKLFTWGDG 502

Query: 434 KYGQLGLGDVIDRNIPS---QVTIEGCVPRNVACGWWHTLLL 472
             G+LG  D+  +  P+   Q+     V   V+CG   T+ L
Sbjct: 503 DKGRLGHADLEKKLQPTCVAQLVEHDFV--QVSCGRMLTVAL 542



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 73/304 (24%), Positives = 121/304 (39%), Gaps = 56/304 (18%)

Query: 103 AAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS-P 161
            A G     A+T+ GE++ WG  E    G +  +  TG           S +L  Q+S P
Sbjct: 362 VACGEYQTCALTDSGELFVWG--ENKYGGNLVCEERTG-----------SQWLPRQISGP 408

Query: 162 RSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGV 221
            + VS S+           S    S  +  +    T      G+    + P  V    G+
Sbjct: 409 LAGVSISNVACGDWHTAAVS----SSGQLFTYGDGTFGVLGHGNLQSVSHPKEVESLKGL 464

Query: 222 RIATVAAGGRHTLALSDI-----------GQVWGWGYGGEGQLGLGSRIRMVSSPHPIPC 270
            + +VA G  HT A+ D+           G+++ WG G +G+LG     + +        
Sbjct: 465 WVKSVACGSWHTAAIVDVIFDRFKFNGVGGKLFTWGDGDKGRLGHADLEKKLQPTCVAQL 524

Query: 271 IESSY-----GKDRSAALSR-GSVNSEGPGF-------------------RVPGNYVKGI 305
           +E  +     G+  + AL+R G + + G                      ++   +VK I
Sbjct: 525 VEHDFVQVSCGRMLTVALTRTGKIYTMGSSVHGQLGNPQAKNKSIAIVEGKLKEEFVKEI 584

Query: 306 ACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAG--LWH 363
           + G  H A +T  G++ T+G G  GQ G G+ +D   P  V +L   Q++ +A G  L  
Sbjct: 585 SSGSYHVAALTSGGSVYTWGKGTNGQLGLGNVEDRNVPTLVEALRDRQVQSIACGSNLTA 644

Query: 364 TICI 367
            IC+
Sbjct: 645 AICL 648


>gi|297673957|ref|XP_002815007.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
           [Pongo abelii]
          Length = 1050

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 91/308 (29%), Positives = 142/308 (46%), Gaps = 51/308 (16%)

Query: 84  KHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGL 143
           + G  PE      +  I+  A G +H +A+++ G++++WG      +G   G L   T  
Sbjct: 70  REGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG------AGSD-GQLGLMTTE 122

Query: 144 DKDVFERQSSFLTEQVSPRSQVSRSSGG---TSSGTDGRGSGEEGSKRRRISLAKQTAES 200
           D     R    L ++++ ++ +  S G     +  +DG+      +   ++ L K+    
Sbjct: 123 DSVAVPR----LIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 201 SSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR 260
           +S         P  V    G+ +A VAAGG H+ ALS  G V+GWG    GQLGL     
Sbjct: 179 AS---------PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE-- 227

Query: 261 MVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA 320
                           KDR +      + ++          V  I+CG  H+AV+T +G 
Sbjct: 228 ----------------KDRESPCHVKLLRTQK---------VVYISCGEEHTAVLTKSGG 262

Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFGGN 379
           + TFG G YGQ G  S +DE++P  V  L+G ++  +A G  HT+  + S G +YAFG  
Sbjct: 263 VFTFGAGSYGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 380 QFGQLGTG 387
             GQLGTG
Sbjct: 323 ARGQLGTG 330



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 113/251 (45%), Gaps = 30/251 (11%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
            I  VA G  H+LALSD GQ++ WG G +GQLGL +    V+ P  I             
Sbjct: 85  HIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ------------ 132

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDE 340
                         ++    +  ++CG  H   +   G   T+G   +GQ G G     +
Sbjct: 133 --------------KLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
            SP  V SL GI +  VAAG  H+  +S  G V+ +G N  GQLG   ++    P  +  
Sbjct: 179 ASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKL 238

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVP 459
              + V    +SCG  HTAV+   G VF +G   YGQLG   + D   P +V  + G   
Sbjct: 239 LRTQKV--VYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVNPRRVLELMGSEV 296

Query: 460 RNVACGWWHTL 470
             +ACG  HTL
Sbjct: 297 TQIACGRQHTL 307



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 118/255 (46%), Gaps = 38/255 (14%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  VA GG H++ L + G+V+  G   +GQLG     R  + P  I  +           
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG---HEREGNKPEQIGALAD--------- 83

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                             ++  +ACG  HS  ++D G L ++G G  GQ G  +T+D ++
Sbjct: 84  -----------------QHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA 126

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD-QAETLPRLLDA 400
            P  +  L    I  V+ G WH + ++SDG  + +G N  GQLG G +  ++  P+    
Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQ--RV 184

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI---EGC 457
            SLE +    V+ G  H+  ++  G VF WG N  GQLGL D  DR  P  V +   +  
Sbjct: 185 RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKV 244

Query: 458 VPRNVACGWWHTLLL 472
           V   ++CG  HT +L
Sbjct: 245 V--YISCGEEHTAVL 257



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 92/369 (24%), Positives = 144/369 (39%), Gaps = 79/369 (21%)

Query: 39  PLTVGS-AWRDVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLP 95
           P  +G+ A + +    CG   ++A+SD  +L +WG+  D     +T+     +P      
Sbjct: 75  PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 96  TEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFL 155
            + +I++ + G  HC+A+   G+ +TWG           G L    GL K+         
Sbjct: 135 NQQTILQVSCGNWHCLALASDGQFFTWG-------KNSHGQL----GLGKE--------F 175

Query: 156 TEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLA-------KQTAESSSSGDENL 208
             Q SP  Q  RS  G        G    G+    +SL+          A      DE  
Sbjct: 176 PSQASP--QRVRSLEGIPLAQVAAG----GAHSFALSLSGAVFGWGMNNAGQLGLSDEKD 229

Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
              PC V L    ++  ++ G  HT  L+  G V+ +G G  GQLG  S   M    +P 
Sbjct: 230 RESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDS---MNDEVNPR 286

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHS-AVITDAGALLTFGWG 327
             +E                        + G+ V  IACG +H+ A +  +G +  FG G
Sbjct: 287 RVLE------------------------LMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLG 385
             GQ G G T +   P+ V             G W  H+  +S+  D + +  +   Q+ 
Sbjct: 323 ARGQLGTGHTCNVKCPSPVK------------GYWAAHSGQLSARADRFKY--HIVKQIF 368

Query: 386 TGGDQAETL 394
           +GGDQ   L
Sbjct: 369 SGGDQTFVL 377



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 62/124 (50%), Gaps = 10/124 (8%)

Query: 354 IEGVAAGLWHTICISSDGDVYAFGGNQFGQLG--TGGDQAETLPRLLDAPSLENVHSKSV 411
           ++ VA G  H++ +  DG+VY  G N  GQLG    G++ E +  L D       H   V
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQIGALADQ------HIIHV 89

Query: 412 SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR-NIPSQV-TIEGCVPRNVACGWWHT 469
           +CG  H+  ++D G++F WG    GQLGL    D   +P  +  +       V+CG WH 
Sbjct: 90  ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149

Query: 470 LLLA 473
           L LA
Sbjct: 150 LALA 153


>gi|395501382|ref|XP_003755074.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Sarcophilus harrisii]
          Length = 1057

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/260 (33%), Positives = 121/260 (46%), Gaps = 34/260 (13%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGL---GSRIRM---VSSPHPIPCIESSYG 276
           I  V+ G  HTLAL+D GQV+ WG   +GQLGL      IR+   + S   I  ++ + G
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACG 145

Query: 277 KDRSAALSRGS------VNSEGP---GFRVP------------GNYVKGIACGGRHSAVI 315
              S ALS+GS       N  G    GF +             G     +A GG HS V+
Sbjct: 146 YYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVL 205

Query: 316 TDAGALLTFGWGL--YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDV 373
           T +GA+  FGWG   +GQ G    +D   PN + SL   +I  +  G  HT  ++ +G V
Sbjct: 206 TLSGAI--FGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263

Query: 374 YAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGW 432
           + FG   +GQLG      E  PR      L       ++CG +HT A +   G+++ +G 
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPR--KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGL 321

Query: 433 NKYGQLGLGDVIDRNIPSQV 452
              GQLG G   +R  P  V
Sbjct: 322 GGNGQLGTGSTSNRKSPFTV 341



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 131/294 (44%), Gaps = 34/294 (11%)

Query: 205 DENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSS 264
           DE +   P         ++  V  G RHT+ + D G V+  G    GQLG     +    
Sbjct: 18  DEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---HEKSRKK 74

Query: 265 PHPIPCIES------SYGKDRSAALS-RGSVNSEG---------PG----FRVPGNY--- 301
           P  +  +++      S G+  + AL+ +G V + G         PG     RVP N    
Sbjct: 75  PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSL 134

Query: 302 ----VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDELSPNCVSSLLGIQIEG 356
               +  IACG  HS  ++    + ++G   +GQ G G     + SP  + SLLGI    
Sbjct: 135 TDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQ 194

Query: 357 VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR 416
           VAAG  H+  ++  G ++ +G N+FGQLG   +    +P LL   SL +     + CG  
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLK--SLRSQKIVYICCGED 252

Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
           HTA +  +G VF +G   YGQLG         P +V  + G +   +ACG  HT
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  VQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLGT-GGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    ++CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPR--NIKSLTDIQIVQIACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VF WG NK+GQLGLG  + R    Q+  ++ G     VA G  H+ +L +
Sbjct: 152 LSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTL 207



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/160 (34%), Positives = 83/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      +  +++ V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDTDGQL 116

Query: 439 GLGDV-----IDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      +ACG++H+L L+
Sbjct: 117 GLPGTEEYIRVPRNIKSLTDIQIV---QIACGYYHSLALS 153



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 83/307 (27%), Positives = 129/307 (42%), Gaps = 54/307 (17%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D       + ++  +P      T+  IV+ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSS-FLTEQV--SP 161
            G+ H +A+++G EV++WG  +        G L  G  L     +RQSS  L + +   P
Sbjct: 144 CGYYHSLALSKGSEVFSWGQNK-------HGQLGLGFEL-----KRQSSPQLIKSLLGIP 191

Query: 162 RSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGV 221
            +QV  ++GG  S          G  R +              DEN    P L+      
Sbjct: 192 FTQV--AAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRFVPNLLKSLRSQ 242

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
           +I  +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +             
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV------------- 288

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                        F + G+ V  IACG +H SA +  +G + +FG G  GQ G GST + 
Sbjct: 289 -------------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNR 335

Query: 341 LSPNCVS 347
            SP  V 
Sbjct: 336 KSPFTVK 342



 Score = 42.7 bits (99), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 56/244 (22%), Positives = 96/244 (39%), Gaps = 59/244 (24%)

Query: 36  VRLPLTVGSAWR-DVCGGGCGF--AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPF 92
           +R+P  + S     +    CG+  ++A+S   ++ +WG             KHG++   F
Sbjct: 125 IRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQ-----------NKHGQLGLGF 173

Query: 93  PLPTEAS-----------IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGT 141
            L  ++S             + AAG AH   +T  G ++ WG  +       FG L    
Sbjct: 174 ELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNK-------FGQLGLND 226

Query: 142 GLDKDVFERQSSFLTEQV-------SPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLA 194
             D+ V     S  ++++          + +++  G  + G  G G              
Sbjct: 227 ENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYG-------------- 272

Query: 195 KQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLAL-SDIGQVWGWGYGGEGQL 253
            Q   +S+S + N    P  V    G  +  +A G +HT A     G+++ +G GG GQL
Sbjct: 273 -QLGHNSTSHEIN----PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQL 327

Query: 254 GLGS 257
           G GS
Sbjct: 328 GTGS 331


>gi|119578072|gb|EAW57668.1| hCG2006901, isoform CRA_e [Homo sapiens]
          Length = 2948

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 129/255 (50%), Gaps = 29/255 (11%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           V+IA   + G H LAL+  G+V+ WG G  G+LG G  +     P   P + S++   ++
Sbjct: 458 VKIAA-HSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 511

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                             G +V  IACG  +SA IT  G L T+G G YG+ G GS++DE
Sbjct: 512 ------------------GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 553

Query: 341 LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
             P  V+ L G+++  VA  +G   T+ ++ +G V+++G   +G+LG GG      P+L+
Sbjct: 554 AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLI 613

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGC 457
           +   L+++    V CG++ +  +  DG+V+ WG     +LG G       P  +  ++G 
Sbjct: 614 E--KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGK 671

Query: 458 VPRNVACGWWHTLLL 472
              +VA G  H L L
Sbjct: 672 KVIDVAAGSTHCLAL 686



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 92/217 (42%), Gaps = 38/217 (17%)

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
           SS DE   A P LV    G+++  VA  +G   TLA+++ GQVW WG G  G+LG G   
Sbjct: 549 SSEDE---AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG--- 602

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITD 317
                                     GS   + P    ++    V  + CG + S  +T 
Sbjct: 603 --------------------------GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTK 636

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
            G + ++G G   + G G+ +    P  +  L G ++  VAAG  H + ++ D +V+++G
Sbjct: 637 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 696

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
            N   Q         T P     P L+  H   ++CG
Sbjct: 697 SND--QCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 731


>gi|224135109|ref|XP_002327568.1| predicted protein [Populus trichocarpa]
 gi|222836122|gb|EEE74543.1| predicted protein [Populus trichocarpa]
          Length = 973

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 132/294 (44%), Gaps = 42/294 (14%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEG-QLGLGSRIR------MVSS 264
           P +V    GV + +VA G   T AL+D G+++ WG    G  LG   R R       +S 
Sbjct: 348 PKMVESLDGVHVKSVACGEYQTCALTDSGELYAWGENKYGANLGCEERSRSQWLPRRISG 407

Query: 265 PHPIPCIES------------------SYGKDRSAALSRG---SVNSEGPGFRVPGNYVK 303
           P    CI +                  +YG      L  G   SV+       + G  VK
Sbjct: 408 PLTGVCILNVACGDWHTAIVSSSGQLFTYGDGSFGVLGHGNLLSVSQPKEVESLKGLLVK 467

Query: 304 GIACGGRHSAVITDA-----------GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGI 352
            +ACG  H+A I D            G L T+G G  G+ G    + +L P CV+ L+ +
Sbjct: 468 SVACGSWHTAAIVDIIVDRFKFNGVGGKLFTWGDGDKGRLGHADLEKKLLPTCVAQLVEL 527

Query: 353 QIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVS 412
             + V+ G   T+ +++ G VY  G +  GQLG    + +++  ++    L+    K +S
Sbjct: 528 DFDQVSCGRMLTVALTNTGKVYTMGSSVHGQLGNPHAKDKSI--VIVEGKLKEEFVKEIS 585

Query: 413 CGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
            G+ H A +   G ++ WG    GQLGLG+V DRN P+ V  +     +++ACG
Sbjct: 586 SGSYHVAALTSSGSLYTWGKGTNGQLGLGNVEDRNFPTLVEALRDMQVQSIACG 639



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 60/171 (35%), Positives = 102/171 (59%), Gaps = 4/171 (2%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V  I+ G +H+A+IT  G +  +G G  G+ G     D  SP  V SL G+ ++ VA G 
Sbjct: 307 VTNISLGRKHAALITKRGEVFCWGEGSRGKLGHKVDMDVSSPKMVESLDGVHVKSVACGE 366

Query: 362 WHTICISSDGDVYAFGGNQFG-QLG-TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
           + T  ++  G++YA+G N++G  LG     +++ LPR +  P L  V   +V+CG  HTA
Sbjct: 367 YQTCALTDSGELYAWGENKYGANLGCEERSRSQWLPRRISGP-LTGVCILNVACGDWHTA 425

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
           +++  G++F +G   +G LG G+++  + P +V +++G + ++VACG WHT
Sbjct: 426 IVSSSGQLFTYGDGSFGVLGHGNLLSVSQPKEVESLKGLLVKSVACGSWHT 476



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 117/257 (45%), Gaps = 45/257 (17%)

Query: 211 FPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM-VSSPHPIP 269
            P L+     + +  ++ G +H   ++  G+V+ WG G  G+  LG ++ M VSSP  + 
Sbjct: 295 LPKLLESTVMLDVTNISLGRKHAALITKRGEVFCWGEGSRGK--LGHKVDMDVSSPKMVE 352

Query: 270 CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
            ++                          G +VK +ACG   +  +TD+G L  +G   Y
Sbjct: 353 SLD--------------------------GVHVKSVACGEYQTCALTDSGELYAWGENKY 386

Query: 330 GQ---CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
           G    C + S    L       L G+ I  VA G WHT  +SS G ++ +G   FG LG 
Sbjct: 387 GANLGCEERSRSQWLPRRISGPLTGVCILNVACGDWHTAIVSSSGQLFTYGDGSFGVLGH 446

Query: 387 GGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD-----------DGKVFCWGWNKY 435
           G   + + P+  +  SL+ +  KSV+CG+ HTA I D            GK+F WG    
Sbjct: 447 GNLLSVSQPK--EVESLKGLLVKSVACGSWHTAAIVDIIVDRFKFNGVGGKLFTWGDGDK 504

Query: 436 GQLGLGDVIDRNIPSQV 452
           G+LG  D+  + +P+ V
Sbjct: 505 GRLGHADLEKKLLPTCV 521



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 76/139 (54%), Gaps = 6/139 (4%)

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D L P  + S + + +  ++ G  H   I+  G+V+ +G    G+LG   D   + P+++
Sbjct: 292 DALLPKLLESTVMLDVTNISLGRKHAALITKRGEVFCWGEGSRGKLGHKVDMDVSSPKMV 351

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYG-QLGLGDVIDRN-IPSQVT--I 454
           +  SL+ VH KSV+CG   T  + D G+++ WG NKYG  LG  +      +P +++  +
Sbjct: 352 E--SLDGVHVKSVACGEYQTCALTDSGELYAWGENKYGANLGCEERSRSQWLPRRISGPL 409

Query: 455 EGCVPRNVACGWWHTLLLA 473
            G    NVACG WHT +++
Sbjct: 410 TGVCILNVACGDWHTAIVS 428



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 69/144 (47%), Gaps = 29/144 (20%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
           V+ G   T+AL++ G+V+  G    GQLG         +PH          KD+S  +  
Sbjct: 532 VSCGRMLTVALTNTGKVYTMGSSVHGQLG---------NPH---------AKDKSIVIVE 573

Query: 286 GSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNC 345
           G +  E         +VK I+ G  H A +T +G+L T+G G  GQ G G+ +D   P  
Sbjct: 574 GKLKEE---------FVKEISSGSYHVAALTSSGSLYTWGKGTNGQLGLGNVEDRNFPTL 624

Query: 346 VSSLLGIQIEGVAAG--LWHTICI 367
           V +L  +Q++ +A G  L   IC+
Sbjct: 625 VEALRDMQVQSIACGSNLTAAICL 648


>gi|119578071|gb|EAW57667.1| hCG2006901, isoform CRA_d [Homo sapiens]
          Length = 1677

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 129/255 (50%), Gaps = 29/255 (11%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           V+IA   + G H LAL+  G+V+ WG G  G+LG G  +     P   P + S++   ++
Sbjct: 487 VKIAA-HSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 540

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                             G +V  IACG  +SA IT  G L T+G G YG+ G GS++DE
Sbjct: 541 ------------------GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 582

Query: 341 LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
             P  V+ L G+++  VA  +G   T+ ++ +G V+++G   +G+LG GG      P+L+
Sbjct: 583 AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLI 642

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGC 457
           +   L+++    V CG++ +  +  DG+V+ WG     +LG G       P  +  ++G 
Sbjct: 643 E--KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGK 700

Query: 458 VPRNVACGWWHTLLL 472
              +VA G  H L L
Sbjct: 701 KVIDVAAGSTHCLAL 715



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 92/217 (42%), Gaps = 38/217 (17%)

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
           SS DE   A P LV    G+++  VA  +G   TLA+++ GQVW WG G  G+LG G   
Sbjct: 578 SSEDE---AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG--- 631

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITD 317
                                     GS   + P    ++    V  + CG + S  +T 
Sbjct: 632 --------------------------GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTK 665

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
            G + ++G G   + G G+ +    P  +  L G ++  VAAG  H + ++ D +V+++G
Sbjct: 666 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 725

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
            N   Q         T P     P L+  H   ++CG
Sbjct: 726 SND--QCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 760


>gi|158300884|ref|XP_552411.3| AGAP011823-PA [Anopheles gambiae str. PEST]
 gi|157013375|gb|EAL38855.3| AGAP011823-PA [Anopheles gambiae str. PEST]
          Length = 4947

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 97/317 (30%), Positives = 138/317 (43%), Gaps = 82/317 (25%)

Query: 212  PCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP 269
            P LV     V I  VA  +GG+H LALS  G+V+ WG G +G+LG G+R           
Sbjct: 4165 PTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNR----------- 4213

Query: 270  CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
                SY  DR   +   S           G  V  IACG  HSA IT  G +LT+G G Y
Sbjct: 4214 ---DSY--DRPKLIESLS-----------GIGVVDIACGSAHSACITIQGHVLTWGKGRY 4257

Query: 330  GQCGQGSTDDELSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTG 387
            G+ G G ++D+L P  V +LLG +   +A  +G   T+CI+ D +V+++G   +G+LG G
Sbjct: 4258 GRLGHGDSEDQLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG 4317

Query: 388  GDQAETLPRLLDA----------------------------------------------- 400
            G     +P  +++                                               
Sbjct: 4318 GSDGCKVPMKIESLAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRP 4377

Query: 401  ---PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEG 456
                +L+     S++ G+ H    +D G+VF WG N  GQLG G V     P  V +++G
Sbjct: 4378 KKVAALQGKKIISIATGSLHCVACSDAGEVFTWGDNDEGQLGDGTVSAIQRPRLVQSLQG 4437

Query: 457  CVPRNVACGWWHTLLLA 473
                 V CG  HTL L+
Sbjct: 4438 KHIVKVICGSAHTLALS 4454



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 85/310 (27%), Positives = 128/310 (41%), Gaps = 84/310 (27%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GG+H +AL+  G+V+ WG G +G+LG G+R+ +   P  I  + +   +D  
Sbjct: 3115 VKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLTL-EKPKLIETLRTKRIRD-- 3171

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                    IACG  HSA IT +G L T+G G YG+ G G    +
Sbjct: 3172 ------------------------IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQ 3207

Query: 341  LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQ--------------- 383
            L P  V++L   ++  VA G     T+C++ DG V+++G   FG+               
Sbjct: 3208 LKPKLVTALQDHRVVQVACGSRDAQTLCLTEDGLVFSWGDGDFGKLGRGGSEGCSIPHQV 3267

Query: 384  -------------------------------------LGTGGDQAETLPRLLDAPSLENV 406
                                                 LG G DQ    P  +    L   
Sbjct: 3268 DRLNGVGVMQIECGAQFSLALTKAGEVWTWGKGDYYRLGHGTDQHVRKPTPIQG--LRGK 3325

Query: 407  HSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACG 465
                V+ GA H   + D G+V+ WG N +GQ G G+ I    PS V  ++G     VACG
Sbjct: 3326 KVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQGSGNTIVNKKPSLVLGLDGIFVNRVACG 3385

Query: 466  WWHTLLLAVP 475
              H++  ++P
Sbjct: 3386 SSHSVAWSLP 3395



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 99/361 (27%), Positives = 160/361 (44%), Gaps = 52/361 (14%)

Query: 118 EVYTWGWKECVPSGRVFGDLSTG---TGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSS 174
           +++T GW  C P   ++G  +T    TG+D  +    ++ +   +    Q+  +      
Sbjct: 520 KIFTLGWSACAP--ELYGFTATEAIRTGIDGAMPRYSTATIDLLLDQVRQIVCAENCVYI 577

Query: 175 GTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTL 234
            TD   SG        IS+ +    +   G E      C +     V++A     GRH L
Sbjct: 578 LTD---SGTVLYLSHAISMTEDNYPAQVKGLE------CTI-----VQLA-AHCEGRHVL 622

Query: 235 ALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPG 294
           AL+  G V+ WG G  G+LG G      +S   +P         R AAL+          
Sbjct: 623 ALASSGDVYSWGSGDGGRLGHGD-----TSAKELPT--------RIAALA---------- 659

Query: 295 FRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQI 354
                  V G+ CG  +SA IT +G L T+G G YG+ G G+++D+  P  V++L   ++
Sbjct: 660 ----DRQVTGVFCGSSYSAAITASGELYTWGRGTYGRLGHGNSEDKYVPTLVTALKAHRV 715

Query: 355 EGVAAGL--WHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVS 412
             VA G    H++C++  G  +A+G   FG+LG       ++P  +D P    V    V 
Sbjct: 716 VHVALGCGDAHSLCVTEAGLAFAWGDGDFGKLGNESCVGTSVPVQVDLPQASCV--VKVF 773

Query: 413 CGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLL 471
            G++ +  +  +G V+ WG    G+LG G+     +P  V  +EG    ++A G  H L 
Sbjct: 774 SGSQFSVALTREGTVYTWGKGHGGRLGHGNSEHSPVPKMVQALEGKKIVDLAVGLAHCLA 833

Query: 472 L 472
           L
Sbjct: 834 L 834



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 97/326 (29%), Positives = 139/326 (42%), Gaps = 54/326 (16%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V   +G  HC+A++  GEV++WG  E         D   G G ++D ++R    L E +S
Sbjct: 4179 VAVNSGGKHCLALSSDGEVFSWGEGE---------DGKLGHG-NRDSYDRPK--LIESLS 4226

Query: 161  PRSQVSRSSGGTSSG-TDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
                V  + G   S     +G      K R   L          GD      P LV    
Sbjct: 4227 GIGVVDIACGSAHSACITIQGHVLTWGKGRYGRLGH--------GDSEDQLQPKLVEALL 4278

Query: 220  GVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPC-IESSYG 276
            G R   +A  +G   TL ++D   VW WG G  G+LG G      S    +P  IES   
Sbjct: 4279 GYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGG-----SDGCKVPMKIES--- 4330

Query: 277  KDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGS 336
                                + G  V  + CG + S  +T +G++ T+G G Y + G G+
Sbjct: 4331 --------------------LAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGN 4370

Query: 337  TDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPR 396
            TD    P  V++L G +I  +A G  H +  S  G+V+ +G N  GQLG G   A   PR
Sbjct: 4371 TDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVFTWGDNDEGQLGDGTVSAIQRPR 4430

Query: 397  LLDAPSLENVHSKSVSCGARHTAVIA 422
            L+   SL+  H   V CG+ HT  ++
Sbjct: 4431 LVQ--SLQGKHIVKVICGSAHTLALS 4454



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 118/250 (47%), Gaps = 30/250 (12%)

Query: 226  VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
            +A G +    +S  G+++  G G  G+LGLG     V +P  +P I S Y   + A  S 
Sbjct: 3066 IAGGSKSLFIVSQDGKLYACGEGTNGRLGLGHN-NNVPTPKQVP-ILSQYVVKKVAVHS- 3122

Query: 286  GSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNC 345
                                  GG+H+  +T  G + ++G G  G+ G G+      P  
Sbjct: 3123 ----------------------GGKHAMALTLDGKVFSWGEGEDGKLGHGNRLTLEKPKL 3160

Query: 346  VSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLEN 405
            + +L   +I  +A G  H+  I+S G++Y +G  ++G+LG G +  +  P+L+ A  L++
Sbjct: 3161 IETLRTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTA--LQD 3218

Query: 406  VHSKSVSCGAR--HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNV 462
                 V+CG+R   T  + +DG VF WG   +G+LG G     +IP QV  + G     +
Sbjct: 3219 HRVVQVACGSRDAQTLCLTEDGLVFSWGDGDFGKLGRGGSEGCSIPHQVDRLNGVGVMQI 3278

Query: 463  ACGWWHTLLL 472
             CG   +L L
Sbjct: 3279 ECGAQFSLAL 3288



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 142/345 (41%), Gaps = 58/345 (16%)

Query: 83   GKHGEIPEPFPLPTEAS-IVKAAA---GWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLS 138
            G +  +P P  +P  +  +VK  A   G  H +A+T  G+V++WG  E        G L 
Sbjct: 3096 GHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGED-------GKLG 3148

Query: 139  TGTGLDKDVFERQSSFLTEQVSPRS-QVSRSSGGTSSGTDGR-GSGEEGSKRRRISLAKQ 196
             G  L  +  +   +  T+++   +   S S+  TSSG     G GE G           
Sbjct: 3149 HGNRLTLEKPKLIETLRTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRL--------- 3199

Query: 197  TAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGR--HTLALSDIGQVWGWGYGGEGQLG 254
                   GD      P LVT     R+  VA G R   TL L++ G V+ WG G  G+LG
Sbjct: 3200 -----GHGDNCTQLKPKLVTALQDHRVVQVACGSRDAQTLCLTEDGLVFSWGDGDFGKLG 3254

Query: 255  LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAV 314
             G      S PH +                           R+ G  V  I CG + S  
Sbjct: 3255 RGGS-EGCSIPHQVD--------------------------RLNGVGVMQIECGAQFSLA 3287

Query: 315  ITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVY 374
            +T AG + T+G G Y + G G+      P  +  L G ++  VA G  H + ++  G VY
Sbjct: 3288 LTKAGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVY 3347

Query: 375  AFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            A+G N  GQ G+G       P L+    L+ +    V+CG+ H+ 
Sbjct: 3348 AWGDNDHGQQGSGNTIVNKKPSLV--LGLDGIFVNRVACGSSHSV 3390



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 110/229 (48%), Gaps = 36/229 (15%)

Query: 242  VWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPG 299
            ++GWG+   GQLG   GSRI+     +P PC                    E      P 
Sbjct: 4091 IFGWGHNHRGQLGGLDGSRIK-----NPTPC--------------------EALSLLRPI 4125

Query: 300  NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA- 358
                 IA G +    +T  G L   G+G  G+ G G TD   +P  V SL  + I+ VA 
Sbjct: 4126 Q----IAGGEQTLYAVTPDGKLYATGYGAGGRLGVGGTDSVTTPTLVESLQHVMIKKVAV 4181

Query: 359  -AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARH 417
             +G  H + +SSDG+V+++G  + G+LG G   +   P+L++  SL  +    ++CG+ H
Sbjct: 4182 NSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRPKLIE--SLSGIGVVDIACGSAH 4239

Query: 418  TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
            +A I   G V  WG  +YG+LG GD  D+  P  V  + G    ++ACG
Sbjct: 4240 SACITIQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEALLGYRAIDIACG 4288



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 94/349 (26%), Positives = 138/349 (39%), Gaps = 70/349 (20%)

Query: 25   PQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDD--LGQSYVTS 82
            P++ PILS  VV+         +     G   AMA++   K+ +WG  +D  LG      
Sbjct: 3104 PKQVPILSQYVVK---------KVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGH----- 3149

Query: 83   GKHGEIPEPFPLPT--EASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTG 140
            G    + +P  + T     I   A G +H  A+T  GE+YTWG  E       +G L  G
Sbjct: 3150 GNRLTLEKPKLIETLRTKRIRDIACGSSHSAAITSSGELYTWGLGE-------YGRLGHG 3202

Query: 141  TGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQ 196
                +   +  ++    +V   +  SR +       DG     G G+ G   R       
Sbjct: 3203 DNCTQLKPKLVTALQDHRVVQVACGSRDAQTLCLTEDGLVFSWGDGDFGKLGR------- 3255

Query: 197  TAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLG 256
                   G E  S  P  V    GV +  +  G + +LAL+  G+VW WG G   +LG G
Sbjct: 3256 ------GGSEGCS-IPHQVDRLNGVGVMQIECGAQFSLALTKAGEVWTWGKGDYYRLGHG 3308

Query: 257  SRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVIT 316
            +  + V  P PI                         G R  G  V  +A G  H   +T
Sbjct: 3309 TD-QHVRKPTPIQ------------------------GLR--GKKVIHVAVGALHCLAVT 3341

Query: 317  DAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTI 365
            D+G +  +G   +GQ G G+T     P+ V  L GI +  VA G  H++
Sbjct: 3342 DSGQVYAWGDNDHGQQGSGNTIVNKKPSLVLGLDGIFVNRVACGSSHSV 3390



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 54/243 (22%), Positives = 104/243 (42%), Gaps = 43/243 (17%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
           GD +    P  +      ++  V  G  ++ A++  G+++ WG G  G+LG G+     S
Sbjct: 644 GDTSAKELPTRIAALADRQVTGVFCGSSYSAAITASGELYTWGRGTYGRLGHGN-----S 698

Query: 264 SPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLT 323
               +P + ++    R   ++ G                    CG  HS  +T+AG    
Sbjct: 699 EDKYVPTLVTALKAHRVVHVALG--------------------CGDAHSLCVTEAGLAFA 738

Query: 324 FGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE--------GVAAGLWHTICISSDGDVYA 375
           +G G +G+ G  S        CV + + +Q++         V +G   ++ ++ +G VY 
Sbjct: 739 WGDGDFGKLGNES--------CVGTSVPVQVDLPQASCVVKVFSGSQFSVALTREGTVYT 790

Query: 376 FGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKY 435
           +G    G+LG G  +   +P+++ A  LE      ++ G  H   +   G+++ WG N +
Sbjct: 791 WGKGHGGRLGHGNSEHSPVPKMVQA--LEGKKIVDLAVGLAHCLALTASGELYGWGRNDF 848

Query: 436 GQL 438
            Q+
Sbjct: 849 QQI 851



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 136/320 (42%), Gaps = 65/320 (20%)

Query: 97  EASIVKAAAGWA--HCVAVTEGGEVYTWGWKECVPSGRV-FGDLSTGTGLDKDVFERQSS 153
           E +IV+ AA     H +A+   G+VY+WG  +    GR+  GD S      K++  R ++
Sbjct: 606 ECTIVQLAAHCEGRHVLALASSGDVYSWGSGD---GGRLGHGDTSA-----KELPTRIAA 657

Query: 154 FLTEQVS-PRSQVSRSSGGTSSG---TDGRGS-GEEGSKRRRISLAKQTAESSSSGDENL 208
               QV+      S S+  T+SG   T GRG+ G  G                  G+   
Sbjct: 658 LADRQVTGVFCGSSYSAAITASGELYTWGRGTYGRLGH-----------------GNSED 700

Query: 209 SAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPH 266
              P LVT     R+  VA   G  H+L +++ G  + WG G  G+LG  S         
Sbjct: 701 KYVPTLVTALKAHRVVHVALGCGDAHSLCVTEAGLAFAWGDGDFGKLGNES--------- 751

Query: 267 PIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGW 326
              C+ +S             V  + P      + V  +  G + S  +T  G + T+G 
Sbjct: 752 ---CVGTSV-----------PVQVDLP----QASCVVKVFSGSQFSVALTREGTVYTWGK 793

Query: 327 GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQL-- 384
           G  G+ G G+++    P  V +L G +I  +A GL H + +++ G++Y +G N F Q+  
Sbjct: 794 GHGGRLGHGNSEHSPVPKMVQALEGKKIVDLAVGLAHCLALTASGELYGWGRNDFQQICP 853

Query: 385 -GTGGDQAETLPRLLDAPSL 403
                D   T P L   P+L
Sbjct: 854 ECVTRDPIITAPILTTPPTL 873



 Score = 42.7 bits (99), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 98/230 (42%), Gaps = 43/230 (18%)

Query: 38  LPLTVGS-AWRDVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGK--HGEIPEPF 92
           LP  + + A R V G  CG  ++ AI+ S +L TWG          T G+  HG   + +
Sbjct: 651 LPTRIAALADRQVTGVFCGSSYSAAITASGELYTWGRG--------TYGRLGHGNSEDKY 702

Query: 93  PLPTEASIVKAA--------AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLD 144
            +PT  + +KA          G AH + VTE G  + WG  +    G++  +   GT + 
Sbjct: 703 -VPTLVTALKAHRVVHVALGCGDAHSLCVTEAGLAFAWGDGDF---GKLGNESCVGTSVP 758

Query: 145 KDVFERQSSFLTEQVS-PRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSS 203
             V   Q+S + +  S  +  V+ +  GT   T G+G G                     
Sbjct: 759 VQVDLPQASCVVKVFSGSQFSVALTREGTVY-TWGKGHGGR----------------LGH 801

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQL 253
           G+   S  P +V    G +I  +A G  H LAL+  G+++GWG     Q+
Sbjct: 802 GNSEHSPVPKMVQALEGKKIVDLAVGLAHCLALTASGELYGWGRNDFQQI 851


>gi|119578070|gb|EAW57666.1| hCG2006901, isoform CRA_c [Homo sapiens]
          Length = 2984

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 129/255 (50%), Gaps = 29/255 (11%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           V+IA   + G H LAL+  G+V+ WG G  G+LG G  +     P   P + S++   ++
Sbjct: 487 VKIAA-HSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 540

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                             G +V  IACG  +SA IT  G L T+G G YG+ G GS++DE
Sbjct: 541 ------------------GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 582

Query: 341 LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
             P  V+ L G+++  VA  +G   T+ ++ +G V+++G   +G+LG GG      P+L+
Sbjct: 583 AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLI 642

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGC 457
           +   L+++    V CG++ +  +  DG+V+ WG     +LG G       P  +  ++G 
Sbjct: 643 E--KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGK 700

Query: 458 VPRNVACGWWHTLLL 472
              +VA G  H L L
Sbjct: 701 KVIDVAAGSTHCLAL 715



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 92/217 (42%), Gaps = 38/217 (17%)

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
           SS DE   A P LV    G+++  VA  +G   TLA+++ GQVW WG G  G+LG G   
Sbjct: 578 SSEDE---AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG--- 631

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITD 317
                                     GS   + P    ++    V  + CG + S  +T 
Sbjct: 632 --------------------------GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTK 665

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
            G + ++G G   + G G+ +    P  +  L G ++  VAAG  H + ++ D +V+++G
Sbjct: 666 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 725

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
            N   Q         T P     P L+  H   ++CG
Sbjct: 726 SND--QCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 760


>gi|307204787|gb|EFN83345.1| X-linked retinitis pigmentosa GTPase regulator-like protein
           [Harpegnathos saltator]
          Length = 1665

 Score =  107 bits (267), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 64/190 (33%), Positives = 96/190 (50%), Gaps = 31/190 (16%)

Query: 242 VWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNY 301
           ++ WG    GQLGLG ++   SSP  +  +      D                  V G Y
Sbjct: 661 IYVWGASQFGQLGLG-KVLQCSSPELVTSLAQEIIVDA-----------------VAGQY 702

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
                    HS  +T  G + T+GWG++GQ G G+TD++  P  V+SLLG+ +  ++AG 
Sbjct: 703 ---------HSVALTADGRVFTWGWGVHGQLGHGNTDEKSIPTLVTSLLGVVVCHISAGY 753

Query: 362 WHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
            HT+ +S DG VYAFG N  GQLG G +   ++P  +  P  E +  K +S G  H  V+
Sbjct: 754 AHTLALSVDGFVYAFGCNVLGQLGVGSNNKSSIPMKVSLP--EGI--KLISTGYFHNLVV 809

Query: 422 ADDGKVFCWG 431
           ++  K++ WG
Sbjct: 810 SNTNKLYTWG 819



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 62/192 (32%), Positives = 100/192 (52%), Gaps = 22/192 (11%)

Query: 300 NYVKGI-ACGGRHSAVITDA----------GALLT----FGWGL--YGQCGQGSTDDELS 342
           N+ K I + G  H A+I +A          G L+T    + WG   +GQ G G      S
Sbjct: 623 NFKKKILSTGFSHVALIRNANVYTWGSSVQGCLVTNNGIYVWGASQFGQLGLGKVLQCSS 682

Query: 343 PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPS 402
           P  V+SL    I    AG +H++ +++DG V+ +G    GQLG G    +++P L+   S
Sbjct: 683 PELVTSLAQEIIVDAVAGQYHSVALTADGRVFTWGWGVHGQLGHGNTDEKSIPTLVT--S 740

Query: 403 LENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRN 461
           L  V    +S G  HT  ++ DG V+ +G N  GQLG+G     +IP +V++ EG   + 
Sbjct: 741 LLGVVVCHISAGYAHTLALSVDGFVYAFGCNVLGQLGVGSNNKSSIPMKVSLPEGI--KL 798

Query: 462 VACGWWHTLLLA 473
           ++ G++H L+++
Sbjct: 799 ISTGYFHNLVVS 810



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 39/110 (35%), Positives = 65/110 (59%), Gaps = 3/110 (2%)

Query: 366 CISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDG 425
           C+ ++  +Y +G +QFGQLG G     + P L+ + + E +       G  H+  +  DG
Sbjct: 654 CLVTNNGIYVWGASQFGQLGLGKVLQCSSPELVTSLAQEII--VDAVAGQYHSVALTADG 711

Query: 426 KVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLAV 474
           +VF WGW  +GQLG G+  +++IP+ VT + G V  +++ G+ HTL L+V
Sbjct: 712 RVFTWGWGVHGQLGHGNTDEKSIPTLVTSLLGVVVCHISAGYAHTLALSV 761



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 99/394 (25%), Positives = 142/394 (36%), Gaps = 98/394 (24%)

Query: 104 AAGWAHCVAVTEGGEVYTWGW--KECVPS--------GRVFGDLSTGTGLDKDVFERQSS 153
           + G++H VA+     VYTWG   + C+ +           FG L  G  L     E  +S
Sbjct: 630 STGFSH-VALIRNANVYTWGSSVQGCLVTNNGIYVWGASQFGQLGLGKVLQCSSPELVTS 688

Query: 154 FLTEQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLS 209
              E +     V+      +   DGR    G G  G                  G+ +  
Sbjct: 689 LAQEIIV--DAVAGQYHSVALTADGRVFTWGWGVHGQL--------------GHGNTDEK 732

Query: 210 AFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP 269
           + P LVT   GV +  ++AG  HTLALS  G V+ +G    GQLG+GS     ++   IP
Sbjct: 733 SIPTLVTSLLGVVVCHISAGYAHTLALSVDGFVYAFGCNVLGQLGVGS-----NNKSSIP 787

Query: 270 CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
                       +L  G               +K I+ G  H+ V+++   L T  WG  
Sbjct: 788 ---------MKVSLPEG---------------IKLISTGYFHNLVVSNTNKLYT--WGAS 821

Query: 330 GQC-----------------------GQGSTDDELSPNC-------VSSLLGIQIEGVAA 359
            Q                         + S D E  PN        +   L   I+  +A
Sbjct: 822 PQALRLQAQAQKKSRILEQQDASEKRNRTSEDLEKMPNSSLNLDEEMKEFLENNIQTKSA 881

Query: 360 GLWHTICISSDGDVYAFGGNQFGQLGTG---GDQAETLPRLLDAPSLENVHSKSVSCGAR 416
               T  I     +     +    L TG    DQ    P ++D  SL       +S G  
Sbjct: 882 QTETTSNIEIQKKLSE--NSNLKNLNTGFIEEDQTHLKPSVVDT-SLVKGQITQISAGCH 938

Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
           H A+I  DG ++ WG N  GQ+G G   D  IP+
Sbjct: 939 HNALITKDGSLYTWGRNFDGQIGNGTRRDVPIPT 972



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 77/345 (22%), Positives = 134/345 (38%), Gaps = 49/345 (14%)

Query: 66  LITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWK 125
           +  WG++   GQ  +        PE      +  IV A AG  H VA+T  G V+TWGW 
Sbjct: 661 IYVWGASQ-FGQLGLGKVLQCSSPELVTSLAQEIIVDAVAGQYHSVALTADGRVFTWGWG 719

Query: 126 ECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGT-SSGTDGRGSGEE 184
                  V G L  G   +K +    +S L   V     +S     T +   DG      
Sbjct: 720 -------VHGQLGHGNTDEKSIPTLVTSLLGVVV---CHISAGYAHTLALSVDG------ 763

Query: 185 GSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWG 244
                  +           G  N S+ P  V+L  G+++  ++ G  H L +S+  +++ 
Sbjct: 764 ----FVYAFGCNVLGQLGVGSNNKSSIPMKVSLPEGIKL--ISTGYFHNLVVSNTNKLYT 817

Query: 245 WGYGGEG---QLGLGSRIRMVSSPHPIPCIESSYGKDRSA----ALSRGSVNSEGPGFRV 297
           WG   +    Q     + R++         ++S  ++R++     +   S+N +      
Sbjct: 818 WGASPQALRLQAQAQKKSRILEQQ------DASEKRNRTSEDLEKMPNSSLNLDEEMKEF 871

Query: 298 PGNYVKGIACGGRHSAVI------TDAGALLTFGWGLYGQCGQGSTDDELSPNCV-SSLL 350
             N ++  +     ++ I      ++   L     G   +         L P+ V +SL+
Sbjct: 872 LENNIQTKSAQTETTSNIEIQKKLSENSNLKNLNTGFIEE-----DQTHLKPSVVDTSLV 926

Query: 351 GIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLP 395
             QI  ++AG  H   I+ DG +Y +G N  GQ+G G  +   +P
Sbjct: 927 KGQITQISAGCHHNALITKDGSLYTWGRNFDGQIGNGTRRDVPIP 971



 Score = 45.8 bits (107), Expect = 0.042,   Method: Composition-based stats.
 Identities = 42/169 (24%), Positives = 64/169 (37%), Gaps = 27/169 (15%)

Query: 97   EASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDV-----FERQ 151
            +  I + +AG  H   +T+ G +YTWG        R F D   G G  +DV         
Sbjct: 927  KGQITQISAGCHHNALITKDGSLYTWG--------RNF-DGQIGNGTRRDVPIPTPLYYN 977

Query: 152  SSFLTEQVSPRS------QVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGD 205
            S+ +  Q+ PR       Q  +     +   D   +G        IS A ++  +     
Sbjct: 978  SACIFAQIPPRHNDFKRMQNRQDLDNNAKSNDSLNNGNVSETNGNISNAFKSTNTEH--- 1034

Query: 206  ENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG 254
                A P    +NP +    +A G  +T+A+   G V  WG     QLG
Sbjct: 1035 ----AAPIRERINPIINTVVIACGYDYTVAIQPGGTVLAWGNNSRAQLG 1079


>gi|307110133|gb|EFN58370.1| hypothetical protein CHLNCDRAFT_20698, partial [Chlorella
           variabilis]
          Length = 379

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 111/239 (46%), Gaps = 25/239 (10%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES------ 273
           GV I   A GG H LAL D GQ W WG    GQ     +  +++   P+ C+E       
Sbjct: 83  GVHIKQAAIGGWHVLALDDTGQCWAWGGNEYGQCLPRDKRDILA---PVKCLEGIAVKQV 139

Query: 274 SYGKDRSAALSRG---------------SVNSEGPGFRVPGNYVKGIACGGRHSAVITDA 318
           + G   S AL+                 ++N         G++V  ++CG  H+  +  A
Sbjct: 140 AAGGMHSLALTETGEIWMWGEPWGDFSMTINRAPRRIDTTGDFVD-VSCGAFHNLALNAA 198

Query: 319 GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           G   T+G   +G  G G+T     P  V  L G+ I  V+AG WH++ IS++G+VY +G 
Sbjct: 199 GECFTWGINDFGMLGNGTTSYATCPEKVVGLEGVFIADVSAGGWHSMAISAEGEVYVWGR 258

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQ 437
            ++G+LG G     +  R     +LE       SCG  HT V+ D+G+ F WG   +G+
Sbjct: 259 GEYGRLGLGDRTGSSKLRPQKVKTLEGHRVVEGSCGGTHTMVVTDEGRCFIWGRGAFGR 317



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 106/244 (43%), Gaps = 38/244 (15%)

Query: 231 RHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNS 290
           R+TLA+   G V  WG+   G LG G R      P   P         R A L       
Sbjct: 42  RNTLAIGADGNVITWGWNARGTLGHGHR-----EPQGKP--------QRVAGLQ------ 82

Query: 291 EGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLL 350
                   G ++K  A GG H   + D G    +G   YGQC      D L+P  V  L 
Sbjct: 83  --------GVHIKQAAIGGWHVLALDDTGQCWAWGGNEYGQCLPRDKRDILAP--VKCLE 132

Query: 351 GIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
           GI ++ VAAG  H++ ++  G+++ + G  +G      ++A   PR +D           
Sbjct: 133 GIAVKQVAAGGMHSLALTETGEIWMW-GEPWGDFSMTINRA---PRRIDTTG----DFVD 184

Query: 411 VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHT 469
           VSCGA H   +   G+ F WG N +G LG G       P +V  +EG    +V+ G WH+
Sbjct: 185 VSCGAFHNLALNAAGECFTWGINDFGMLGNGTTSYATCPEKVVGLEGVFIADVSAGGWHS 244

Query: 470 LLLA 473
           + ++
Sbjct: 245 MAIS 248



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 68/276 (24%), Positives = 110/276 (39%), Gaps = 55/276 (19%)

Query: 58  MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGG 117
           +A+ D+ +   WG  ++ GQ      +  +I  P       ++ + AAG  H +A+TE G
Sbjct: 97  LALDDTGQCWAWGG-NEYGQCLPRDKR--DILAPVKCLEGIAVKQVAAGGMHSLALTETG 153

Query: 118 EVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTD 177
           E++ WG          +GD S          +    F+         ++ ++ G      
Sbjct: 154 EIWMWG--------EPWGDFSMTINRAPRRIDTTGDFVDVSCGAFHNLALNAAGEC---- 201

Query: 178 GRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS 237
                         +          +G  + +  P  V    GV IA V+AGG H++A+S
Sbjct: 202 -------------FTWGINDFGMLGNGTTSYATCPEKVVGLEGVFIADVSAGGWHSMAIS 248

Query: 238 DIGQVWGWGYGGEGQLGLGSRIRMVS-SPHPIPCIESSYGKDRSAALSRGSVNSEGPGFR 296
             G+V+ WG G  G+LGLG R       P  +  +E                     G R
Sbjct: 249 AEGEVYVWGRGEYGRLGLGDRTGSSKLRPQKVKTLE---------------------GHR 287

Query: 297 VPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQC 332
           V    V+G +CGG H+ V+TD G    +G G +G+C
Sbjct: 288 V----VEG-SCGGTHTMVVTDEGRCFIWGRGAFGRC 318


>gi|327273047|ref|XP_003221294.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Anolis
           carolinensis]
          Length = 1081

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 132/276 (47%), Gaps = 38/276 (13%)

Query: 203 SGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG---LGSRI 259
           SG E  S  P L+      ++  V+ G  H+LA+ + G+V+ WG G  GQLG   LG R+
Sbjct: 75  SGQEKRSYGPELIQALETQKVVHVSCGKEHSLAVCNKGRVYSWGAGTFGQLGTGELGDRL 134

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAG 319
                   IP   ++  K +                      V  +ACG  HS  +T+ G
Sbjct: 135 --------IPKTINALSKYK----------------------VIQVACGHDHSIALTNDG 164

Query: 320 ALLTFGWGLYGQCGQGS-TDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            + ++G  ++GQ G G     + SP  VS+L GI +  VAAG  H+  +S  G VY +G 
Sbjct: 165 RIFSWGQNIHGQLGLGKDISSQASPQQVSALDGIPLAQVAAGGAHSFALSLSGVVYGWGR 224

Query: 379 NQFGQLG-TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQ 437
           N   QLG +     E + +     +L ++    VSCGA HTAV+  +G V+ +G +  GQ
Sbjct: 225 NNAHQLGLSQAKPKEQIFKPYSIAALRSLDVAFVSCGAEHTAVLTQNGSVYTFGDDSAGQ 284

Query: 438 LGLGDVIDRNI-PSQVT-IEGCVPRNVACGWWHTLL 471
           LG          P +V  I+G V   +ACG +HTL+
Sbjct: 285 LGRNSSSSPKFGPQKVEWIDGPVSL-LACGSYHTLV 319



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/240 (31%), Positives = 116/240 (48%), Gaps = 33/240 (13%)

Query: 242 VWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNY 301
           ++ WG G  GQLGLG +   VS P P                         PG R P + 
Sbjct: 2   LYCWGEGSAGQLGLG-KGEGVSGPVPF-----------------------RPGPRAPADQ 37

Query: 302 -VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ----GSTDDELSPNCVSSLLGIQIEG 356
            V  +ACG RH+ ++ D G + + G    GQ G+    G       P  + +L   ++  
Sbjct: 38  AVVLVACGERHTLLLRDDGGVASCGDNSRGQLGRRLPSGQEKRSYGPELIQALETQKVVH 97

Query: 357 VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR 416
           V+ G  H++ + + G VY++G   FGQLGTG      +P+ ++A  L       V+CG  
Sbjct: 98  VSCGKEHSLAVCNKGRVYSWGAGTFGQLGTGELGDRLIPKTINA--LSKYKVIQVACGHD 155

Query: 417 HTAVIADDGKVFCWGWNKYGQLGLG-DVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLAV 474
           H+  + +DG++F WG N +GQLGLG D+  +  P QV+ ++G     VA G  H+  L++
Sbjct: 156 HSIALTNDGRIFSWGQNIHGQLGLGKDISSQASPQQVSALDGIPLAQVAAGGAHSFALSL 215



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 83/297 (27%), Positives = 129/297 (43%), Gaps = 47/297 (15%)

Query: 99  SIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQ 158
            +V  + G  H +AV   G VY+WG          FG L TG   D+ + +  ++    +
Sbjct: 94  KVVHVSCGKEHSLAVCNKGRVYSWG-------AGTFGQLGTGELGDRLIPKTINALSKYK 146

Query: 159 VSPRSQVSRSSGGTSSGT-DGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTL 217
           V    QV+     + + T DGR      +   ++ L K  +  +S         P  V+ 
Sbjct: 147 VI---QVACGHDHSIALTNDGRIFSWGQNIHGQLGLGKDISSQAS---------PQQVSA 194

Query: 218 NPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
             G+ +A VAAGG H+ ALS  G V+GWG     QLGL       S   P   I   Y  
Sbjct: 195 LDGIPLAQVAAGGAHSFALSLSGVVYGWGRNNAHQLGL-------SQAKPKEQIFKPY-- 245

Query: 278 DRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST 337
                 S  ++ S    F         ++CG  H+AV+T  G++ TFG    GQ G+ S+
Sbjct: 246 ------SIAALRSLDVAF---------VSCGAEHTAVLTQNGSVYTFGDDSAGQLGRNSS 290

Query: 338 DD-ELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFGGNQFGQLGTGGDQAE 392
              +  P  V  + G  +  +A G +HT+  IS+ G + +FG     +  +G  Q++
Sbjct: 291 SSPKFGPQKVEWIDG-PVSLLACGSYHTLVRISTSGQLLSFGRGPLQRNRSGTTQSK 346


>gi|156372872|ref|XP_001629259.1| predicted protein [Nematostella vectensis]
 gi|156216255|gb|EDO37196.1| predicted protein [Nematostella vectensis]
          Length = 4220

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/253 (32%), Positives = 124/253 (49%), Gaps = 36/253 (14%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            VR   V +GG+H +ALS  G V+ WG G +G+LG G+R              +S  + R 
Sbjct: 3441 VRKVAVHSGGKHAMALSADGDVYSWGEGDDGKLGHGNR--------------NSCDRPRV 3486

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                R             G  V  I+CGG HSA IT    L T+G G YG+ G G ++D+
Sbjct: 3487 IEALR-------------GKGVIDISCGGSHSACITQNHELYTWGKGRYGRLGHGDSEDQ 3533

Query: 341  LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V +L G ++  VA  +G   T+C++ D  V+++G   +G+LG GG     +P  +
Sbjct: 3534 LLPKVVEALRGNRVIDVACGSGDAQTLCLTDDDCVWSWGDGDYGKLGRGGSDGCKIP--M 3591

Query: 399  DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNI--PSQV-TIE 455
               SL  +    V CG++ +  +   G V+ WG   Y +LG G  +D ++  P +V  ++
Sbjct: 3592 KVESLIGLGVSKVECGSQFSVALTRSGAVYTWGKGDYYRLGHG--VDDHVRRPKRVAALQ 3649

Query: 456  GCVPRNVACGWWH 468
            G     +A G  H
Sbjct: 3650 GKKVITIATGSLH 3662



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 91/294 (30%), Positives = 137/294 (46%), Gaps = 40/294 (13%)

Query: 206  ENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSP 265
            ENLS+F         VR  +V +GGRH +AL+  G+++ WG G +G+LG G+R+     P
Sbjct: 2502 ENLSSF--------MVRKVSVHSGGRHAMALTIEGKLFSWGEGEDGKLGHGNRMN-CDHP 2552

Query: 266  HPIPCIESSYGKDRS-------AALSRGSVNSEGPGF-------------------RVPG 299
              I   +SS  +D S       A LS G + + G G                        
Sbjct: 2553 KLIDTFKSSCVRDMSCGSSHSAAILSSGELYTWGLGEYGRLGHGDNYTHLKPKKVQSFTS 2612

Query: 300  NYVKGIACGGR--HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGV 357
            + V  IACG R   +  +TD G + ++G G +G+ G+G ++    PN V  L G  +  V
Sbjct: 2613 HRVIDIACGSRDAQTLALTDDGTVWSWGDGDFGKLGRGGSEGCSVPNPVEKLQGQGVCKV 2672

Query: 358  AAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARH 417
            A G   ++ +S+ G V+ +G   + +LG G D     P+++D   L       V+ GA H
Sbjct: 2673 ACGAQFSLALSTSGLVWTWGKGDYYRLGHGNDTHVRKPQIVDG--LRGKKIVDVAVGALH 2730

Query: 418  TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
               + D G+VF WG N +GQ G         P  V  +EG     VACG  H++
Sbjct: 2731 CLAVTDSGQVFAWGDNDHGQQGNNTTTVNRRPQLVNGLEGQKITRVACGSSHSI 2784



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 84/267 (31%), Positives = 125/267 (46%), Gaps = 33/267 (12%)

Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
           +   CL      V++ T    G+H LAL+  G+V+ WG G  G+LG G      +SP   
Sbjct: 6   AELECLSRKCEIVQVVT-HTDGKHFLALTREGEVYSWGSGDGGKLGHGD-----TSPREE 59

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL 328
           P + +                         G  V  I+CG  HSA +T  G L T+G G 
Sbjct: 60  PTLVTGLA----------------------GKQVIRISCGSTHSAAVTSEGELYTWGRGN 97

Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGT 386
           YG+ G GS++D+L P  VS L G  I  VA  +G  HT+  + DG V+++G   +G+LG 
Sbjct: 98  YGRLGHGSSEDQLVPVLVSGLRGHHIIDVACGSGDAHTLAAADDGTVWSWGDGDYGKLGR 157

Query: 387 GGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR 446
           GG      P+ ++   L+ +    V CGA+ +  +  DG V+ WG  +  +LG G     
Sbjct: 158 GGSDGCKNPKSIE--RLQGLGVCKVYCGAQFSLALTRDGSVWTWGKGEGFRLGHGTEDHV 215

Query: 447 NIPSQV-TIEGCVPRNVACGWWHTLLL 472
             P  V  ++G    +V+ G  H L L
Sbjct: 216 RHPKLVEALDGKHVVDVSVGSIHCLAL 242



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 74/252 (29%), Positives = 122/252 (48%), Gaps = 31/252 (12%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
           GD +    P LVT   G ++  ++ G  H+ A++  G+++ WG G  G+LG GS     S
Sbjct: 52  GDTSPREEPTLVTGLAGKQVIRISCGSTHSAAVTSEGELYTWGRGNYGRLGHGS-----S 106

Query: 264 SPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGG--RHSAVITDAGAL 321
               +P + S                    G R  G+++  +ACG    H+    D G +
Sbjct: 107 EDQLVPVLVS--------------------GLR--GHHIIDVACGSGDAHTLAAADDGTV 144

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
            ++G G YG+ G+G +D   +P  +  L G+ +  V  G   ++ ++ DG V+ +G  + 
Sbjct: 145 WSWGDGDYGKLGRGGSDGCKNPKSIERLQGLGVCKVYCGAQFSLALTRDGSVWTWGKGEG 204

Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
            +LG G +     P+L++A  L+  H   VS G+ H   + D G+V+CWG N  GQLG  
Sbjct: 205 FRLGHGTEDHVRHPKLVEA--LDGKHVVDVSVGSIHCLALTDAGEVYCWGRNDQGQLGDI 262

Query: 442 DVIDRNIPSQVT 453
           D   R  P+ V+
Sbjct: 263 DCQIRPEPTLVS 274



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 122/265 (46%), Gaps = 29/265 (10%)

Query: 212  PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
            P L      +++  +A G +   A+S  G+V+  G    G+LGLG     V+ P  I  +
Sbjct: 2445 PVLSEFIGALKVQQIAGGSKTLFAVSHDGKVFACGESTNGRLGLGPLSANVTVPRQIENL 2504

Query: 272  ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
             S         + + SV+S                 GGRH+  +T  G L ++G G  G+
Sbjct: 2505 SSFM-------VRKVSVHS-----------------GGRHAMALTIEGKLFSWGEGEDGK 2540

Query: 332  CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
             G G+  +   P  + +     +  ++ G  H+  I S G++Y +G  ++G+LG G +  
Sbjct: 2541 LGHGNRMNCDHPKLIDTFKSSCVRDMSCGSSHSAAILSSGELYTWGLGEYGRLGHGDNYT 2600

Query: 392  ETLPRLLDAPSLENVHSKSVSCGAR--HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIP 449
               P+ + + +   V    ++CG+R   T  + DDG V+ WG   +G+LG G     ++P
Sbjct: 2601 HLKPKKVQSFTSHRV--IDIACGSRDAQTLALTDDGTVWSWGDGDFGKLGRGGSEGCSVP 2658

Query: 450  SQV-TIEGCVPRNVACGWWHTLLLA 473
            + V  ++G     VACG   +L L+
Sbjct: 2659 NPVEKLQGQGVCKVACGAQFSLALS 2683



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 70/218 (32%), Positives = 96/218 (44%), Gaps = 33/218 (15%)

Query: 204  GDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
            GD      P +V    G R+  VA  +G   TL L+D   VW WG G  G+LG G     
Sbjct: 3528 GDSEDQLLPKVVEALRGNRVIDVACGSGDAQTLCLTDDDCVWSWGDGDYGKLGRGG---- 3583

Query: 262  VSSPHPIPC-IESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA 320
             S    IP  +ES  G                         V  + CG + S  +T +GA
Sbjct: 3584 -SDGCKIPMKVESLIGLG-----------------------VSKVECGSQFSVALTRSGA 3619

Query: 321  LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
            + T+G G Y + G G  D    P  V++L G ++  +A G  H +  +  G+VY +G N 
Sbjct: 3620 VYTWGKGDYYRLGHGVDDHVRRPKRVAALQGKKVITIATGSLHCVASTDTGEVYTWGDND 3679

Query: 381  FGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
             GQLG G   A   PRL+ A  L+      V+CG+ HT
Sbjct: 3680 EGQLGDGTTNAIARPRLVTA--LQGKKISRVACGSAHT 3715



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 131/327 (40%), Gaps = 54/327 (16%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V   +G  H +A+T  G++++WG  E        G L  G  ++ D  +   +F +  V 
Sbjct: 2512 VSVHSGGRHAMALTIEGKLFSWGEGE-------DGKLGHGNRMNCDHPKLIDTFKSSCVR 2564

Query: 161  PRSQVSRSSGGTSSGTDGR--GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLN 218
              S  S  S    S  +    G GE G                  GD      P  V   
Sbjct: 2565 DMSCGSSHSAAILSSGELYTWGLGEYGRL--------------GHGDNYTHLKPKKVQSF 2610

Query: 219  PGVRIATVAAGGR--HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYG 276
               R+  +A G R   TLAL+D G VW WG G  G+LG G      S P+P+        
Sbjct: 2611 TSHRVIDIACGSRDAQTLALTDDGTVWSWGDGDFGKLGRGGS-EGCSVPNPVE------- 2662

Query: 277  KDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGS 336
                               ++ G  V  +ACG + S  ++ +G + T+G G Y + G G+
Sbjct: 2663 -------------------KLQGQGVCKVACGAQFSLALSTSGLVWTWGKGDYYRLGHGN 2703

Query: 337  TDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPR 396
                  P  V  L G +I  VA G  H + ++  G V+A+G N  GQ G         P+
Sbjct: 2704 DTHVRKPQIVDGLRGKKIVDVAVGALHCLAVTDSGQVFAWGDNDHGQQGNNTTTVNRRPQ 2763

Query: 397  LLDAPSLENVHSKSVSCGARHTAVIAD 423
            L++   LE      V+CG+ H+   A+
Sbjct: 2764 LVNG--LEGQKITRVACGSSHSIAWAE 2788



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 114/254 (44%), Gaps = 28/254 (11%)

Query: 240  GQVWGWGYGGEGQLG--------LGSRIRMVSSPHPIPCI--------ESSYGK------ 277
            G ++GWG+   GQLG        L   I  ++S  P+  +         ++ GK      
Sbjct: 3354 GTIYGWGHNHRGQLGSLEGAKVKLPQTIEALASIRPVQIVGGEQTLFAVTAEGKVYATGY 3413

Query: 278  ---DRSAALSRGSVNSEGPGFRVPGNYVKGIAC--GGRHSAVITDAGALLTFGWGLYGQC 332
                R       +V S      +    V+ +A   GG+H+  ++  G + ++G G  G+ 
Sbjct: 3414 GHGGRLGLGGTDTVTSIKMLESLQHVVVRKVAVHSGGKHAMALSADGDVYSWGEGDDGKL 3473

Query: 333  GQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAE 392
            G G+ +    P  + +L G  +  ++ G  H+ CI+ + ++Y +G  ++G+LG G  + +
Sbjct: 3474 GHGNRNSCDRPRVIEALRGKGVIDISCGGSHSACITQNHELYTWGKGRYGRLGHGDSEDQ 3533

Query: 393  TLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
             LP++++A     V   +   G   T  + DD  V+ WG   YG+LG G      IP +V
Sbjct: 3534 LLPKVVEALRGNRVIDVACGSGDAQTLCLTDDDCVWSWGDGDYGKLGRGGSDGCKIPMKV 3593

Query: 453  -TIEGCVPRNVACG 465
             ++ G     V CG
Sbjct: 3594 ESLIGLGVSKVECG 3607



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 84/315 (26%), Positives = 124/315 (39%), Gaps = 57/315 (18%)

Query: 57   AMAISDSRKLITWGSTDD--LGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVT 114
            AMA++   KL +WG  +D  LG     +  H ++ + F     + +   + G +H  A+ 
Sbjct: 2521 AMALTIEGKLFSWGEGEDGKLGHGNRMNCDHPKLIDTF---KSSCVRDMSCGSSHSAAIL 2577

Query: 115  EGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSS 174
              GE+YTWG  E       +G L  G        ++  SF + +V   +  SR +   + 
Sbjct: 2578 SSGELYTWGLGE-------YGRLGHGDNYTHLKPKKVQSFTSHRVIDIACGSRDAQTLAL 2630

Query: 175  GTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGG 230
              DG     G G+ G   R              G E  S  P  V    G  +  VA G 
Sbjct: 2631 TDDGTVWSWGDGDFGKLGR-------------GGSEGCSV-PNPVEKLQGQGVCKVACGA 2676

Query: 231  RHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNS 290
            + +LALS  G VW WG G   +LG G+    V  P  +                      
Sbjct: 2677 QFSLALSTSGLVWTWGKGDYYRLGHGNDTH-VRKPQIV---------------------- 2713

Query: 291  EGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLL 350
               G R  G  +  +A G  H   +TD+G +  +G   +GQ G  +T     P  V+ L 
Sbjct: 2714 --DGLR--GKKIVDVAVGALHCLAVTDSGQVFAWGDNDHGQQGNNTTTVNRRPQLVNGLE 2769

Query: 351  GIQIEGVAAGLWHTI 365
            G +I  VA G  H+I
Sbjct: 2770 GQKITRVACGSSHSI 2784



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 82/294 (27%), Positives = 117/294 (39%), Gaps = 52/294 (17%)

Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRS 168
           H +A+T  GEVY+WG  +        G L  G     D   R+   L   ++ + QV R 
Sbjct: 28  HFLALTREGEVYSWGSGDG-------GKLGHG-----DTSPREEPTLVTGLAGK-QVIRI 74

Query: 169 SGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVA- 227
           S G++        GE        +  +        G       P LV+   G  I  VA 
Sbjct: 75  SCGSTHSAAVTSEGE------LYTWGRGNYGRLGHGSSEDQLVPVLVSGLRGHHIIDVAC 128

Query: 228 -AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRG 286
            +G  HTLA +D G VW WG G  G+LG G                             G
Sbjct: 129 GSGDAHTLAAADDGTVWSWGDGDYGKLGRG-----------------------------G 159

Query: 287 SVNSEGPGF--RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN 344
           S   + P    R+ G  V  + CG + S  +T  G++ T+G G   + G G+ D    P 
Sbjct: 160 SDGCKNPKSIERLQGLGVCKVYCGAQFSLALTRDGSVWTWGKGEGFRLGHGTEDHVRHPK 219

Query: 345 CVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            V +L G  +  V+ G  H + ++  G+VY +G N  GQLG    Q    P L+
Sbjct: 220 LVEALDGKHVVDVSVGSIHCLALTDAGEVYCWGRNDQGQLGDIDCQIRPEPTLV 273



 Score = 42.0 bits (97), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 7/79 (8%)

Query: 49   VCGGGCG--FAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
            VC   CG  F++A+S S  + TWG  D   LG    T  +  +I +         IV  A
Sbjct: 2669 VCKVACGAQFSLALSTSGLVWTWGKGDYYRLGHGNDTHVRKPQIVDGL---RGKKIVDVA 2725

Query: 105  AGWAHCVAVTEGGEVYTWG 123
             G  HC+AVT+ G+V+ WG
Sbjct: 2726 VGALHCLAVTDSGQVFAWG 2744



 Score = 40.4 bits (93), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 5/73 (6%)

Query: 53   GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
            G  F++A++ S  + TWG  D   LG        H   P+         ++  A G  HC
Sbjct: 3607 GSQFSVALTRSGAVYTWGKGDYYRLGHGV---DDHVRRPKRVAALQGKKVITIATGSLHC 3663

Query: 111  VAVTEGGEVYTWG 123
            VA T+ GEVYTWG
Sbjct: 3664 VASTDTGEVYTWG 3676



 Score = 40.0 bits (92), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 3/149 (2%)

Query: 324  FGWGL--YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
            +GWG    GQ G         P  + +L  I+   +  G      ++++G VYA G    
Sbjct: 3357 YGWGHNHRGQLGSLEGAKVKLPQTIEALASIRPVQIVGGEQTLFAVTAEGKVYATGYGHG 3416

Query: 382  GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
            G+LG GG    T  ++L++     V   +V  G +H   ++ DG V+ WG    G+LG G
Sbjct: 3417 GRLGLGGTDTVTSIKMLESLQHVVVRKVAVHSGGKHAMALSADGDVYSWGEGDDGKLGHG 3476

Query: 442  DVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            +    + P  +  + G    +++CG  H+
Sbjct: 3477 NRNSCDRPRVIEALRGKGVIDISCGGSHS 3505



 Score = 39.3 bits (90), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 7/79 (8%)

Query: 49  VCGGGCG--FAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           VC   CG  F++A++    + TWG  +   LG       +H ++ E         +V  +
Sbjct: 177 VCKVYCGAQFSLALTRDGSVWTWGKGEGFRLGHGTEDHVRHPKLVEAL---DGKHVVDVS 233

Query: 105 AGWAHCVAVTEGGEVYTWG 123
            G  HC+A+T+ GEVY WG
Sbjct: 234 VGSIHCLALTDAGEVYCWG 252


>gi|397488796|ref|XP_003815430.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Pan
           paniscus]
          Length = 815

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 141/298 (47%), Gaps = 45/298 (15%)

Query: 213 CLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR--------IRMVSS 264
           C+  L P  ++   A G  HTL  ++ G V+  G   EGQLGLG          I   +S
Sbjct: 80  CVKALKPE-KVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTS 138

Query: 265 PHPIPCIESSYGKDRSAALSRGSV------NSEG------------PGFRVPGNYVKGIA 306
            H I  +  S G + SAAL+          NSEG            P     G  V  I+
Sbjct: 139 EHKIKQL--SAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWIS 196

Query: 307 CGGRHSAVITDAGALLTFGWGLYGQCGQGST--DDELSPNCVSSLLGIQIEGVAAGLWHT 364
           CG  HSA +T  G L  FG    G+ G  +    +  +P  VS +    I+ VA G  HT
Sbjct: 197 CGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVIQ-VACGGEHT 255

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAET-LPRLLDAPSLENVHSKSVS---CGARHTAV 420
           + ++ +  VY FG  QFGQLG G    ET  P+++     EN+  +++S   CG  HTA+
Sbjct: 256 VVLTENA-VYTFGLGQFGQLGLGTFLFETSEPKVI-----ENIRDQTISYISCGENHTAL 309

Query: 421 IADDGKVFCWGWNKYGQLGLG--DVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLAVP 475
           I D G ++ +G  ++G+LGLG  +  +  IP+  +     + + VACG  H ++ A P
Sbjct: 310 ITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVIFAAP 367



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/170 (35%), Positives = 93/170 (54%), Gaps = 2/170 (1%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           ++CG  HSAV+T    L  FG   +GQ G GS      P CV +L   +++  A G  HT
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHT 99

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           +  +  G+VYA GGN  GQLG G  +      ++   + E+   K +S G+  +A + +D
Sbjct: 100 LVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEH-KIKQLSAGSNTSAALTED 158

Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAV 474
           G++F WG N  GQ+GL +V +  +P QVTI   V   ++CG++H+  +  
Sbjct: 159 GRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSW-ISCGYYHSAFVTT 207



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/279 (23%), Positives = 126/279 (45%), Gaps = 38/279 (13%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIE------SSYGKDR 279
           ++ G  H+  ++   +++ +G    GQLGLGS+   VS P  +  ++      ++ G++ 
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSK-SAVSKPTCVKALKPEKVKLAACGRNH 98

Query: 280 SAALSRGSV------NSEGP---------------GFRVPGNYVKGIACGGRHSAVITDA 318
           +   + G        N+EG                 F    + +K ++ G   SA +T+ 
Sbjct: 99  TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTED 158

Query: 319 GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           G L  +G    GQ G  +  +   P  V+  +G  +  ++ G +H+  +++DG++Y FG 
Sbjct: 159 GRLFMWGDNSEGQIGLKNVSNVCVPQQVT--IGKPVSWISCGYYHSAFVTTDGELYVFGE 216

Query: 379 NQFGQLGTGGDQ--AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYG 436
            + G+LG           P+L+     + +    V+CG  HT V+ ++  V+ +G  ++G
Sbjct: 217 PENGKLGLPNQLLGNHRTPQLVSEIPEKVIQ---VACGGEHTVVLTENA-VYTFGLGQFG 272

Query: 437 QLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLA 473
           QLGLG  +      +V   I       ++CG  HT L+ 
Sbjct: 273 QLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALIT 311



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 88/330 (26%), Positives = 140/330 (42%), Gaps = 66/330 (20%)

Query: 103 AAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPR 162
           AA G  H +  TEGG VY  G       G   G L  G   +++ F   S F +E     
Sbjct: 92  AACGRNHTLVSTEGGNVYATG-------GNNEGQLGLGDTEERNTFHVISFFTSEH--KI 142

Query: 163 SQVSRSSGGTSSGT-DGR----GSGEEGSKRRRISLAKQTAESSSSGDENLS--AFPCLV 215
            Q+S  S  +++ T DGR    G   EG                  G +N+S    P  V
Sbjct: 143 KQLSAGSNTSAALTEDGRLFMWGDNSEG----------------QIGLKNVSNVCVPQQV 186

Query: 216 TLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSY 275
           T+  G  ++ ++ G  H+  ++  G+++ +G    G+LGL +++                
Sbjct: 187 TI--GKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQL---------------L 229

Query: 276 GKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG 335
           G  R+  L             +P   ++ +ACGG H+ V+T+  A+ TFG G +GQ G G
Sbjct: 230 GNHRTPQLVS----------EIPEKVIQ-VACGGEHTVVLTE-NAVYTFGLGQFGQLGLG 277

Query: 336 STDDELS-PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAET- 393
           +   E S P  + ++    I  ++ G  HT  I+  G +Y FG  + G+LG G +     
Sbjct: 278 TFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNH 337

Query: 394 -LPRLLDAPSLENVHSKSVSCGARHTAVIA 422
            +P L    +      K V+CG  H  + A
Sbjct: 338 FIPTL--CSNFLRFIVKLVACGGCHMVIFA 365


>gi|50511409|gb|AAT77332.1| unknown prtein [Oryza sativa Japonica Group]
          Length = 901

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 98/171 (57%), Gaps = 4/171 (2%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ I+CGGRH+ ++T  G + ++G    G+ G G   D   P  + +L  + IE VA G 
Sbjct: 312 VQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALANMNIELVACGE 371

Query: 362 WHTICISSDGDVYAFGG--NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
           +HT  ++  GD+Y +G   +  G LG G + +  +P+ ++ P LE +H  ++SCG  HTA
Sbjct: 372 YHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGP-LEGIHVSAISCGPWHTA 430

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
           ++   G++F +G   +G LG GD    ++P +V +++G      ACG WHT
Sbjct: 431 IVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHT 481



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 74/268 (27%), Positives = 120/268 (44%), Gaps = 42/268 (15%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G+ ++ ++ G  HT  ++  GQ++ +G G  G LG G R + +S P  +  ++       
Sbjct: 416 GIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDR-QSLSVPREVESLK------- 467

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDA------------GALLTFGWG 327
                         G R     V+  ACG  H+A + +             G + T+G G
Sbjct: 468 --------------GLRT----VRA-ACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDG 508

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG 387
             G+ G G  D  L P CV++L+      +A G   T+ +++ G VY  G   +GQLG  
Sbjct: 509 DKGRLGHGDKDTRLVPTCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGN- 567

Query: 388 GDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
             QA+ +  +     L     + +SCGA H AV+    +V+ WG    G+LG GD  DR+
Sbjct: 568 -PQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRS 626

Query: 448 IPSQV-TIEGCVPRNVACGWWHTLLLAV 474
            P+ V  ++    R V CG   T  + +
Sbjct: 627 SPTLVEALKDKQVRTVVCGINFTAAICI 654



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/268 (28%), Positives = 121/268 (45%), Gaps = 49/268 (18%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  ++ GGRH   ++  G+++ WG    G+LG G     V    P P +      D  A 
Sbjct: 312 VQNISCGGRHATLVTKQGEIYSWGEESGGRLGHG-----VDCDVPQPKL-----IDALAN 361

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTDDE 340
           ++                 ++ +ACG  H+  +T +G L T+G G    G  G G+    
Sbjct: 362 MN-----------------IELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSH 404

Query: 341 LSPNCVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLD 399
             P  V+  L GI +  ++ G WHT  ++S G ++ FG   FG LG G  Q+ ++PR  +
Sbjct: 405 WVPKRVNGPLEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPR--E 462

Query: 400 APSLENVHSKSVSCGARHTAVIAD------------DGKVFCWGWNKYGQLGLGDVIDRN 447
             SL+ + +   +CG  HTA + +             GK+F WG    G+LG GD   R 
Sbjct: 463 VESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRL 522

Query: 448 IPSQVTIEGCVPRN---VACGWWHTLLL 472
           +P+   +   V  N   +ACG   T+ L
Sbjct: 523 VPT--CVAALVEPNFCQIACGHCMTVAL 548



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 74/142 (52%), Gaps = 6/142 (4%)

Query: 335 GSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL 394
           G   D L P  +   + + ++ ++ G  H   ++  G++Y++G    G+LG G D     
Sbjct: 293 GVNMDCLIPKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQ 352

Query: 395 PRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW--GWNKYGQLGLGDVIDRNIPSQV 452
           P+L+DA  L N++ + V+CG  HT  +   G ++ W  G +  G LG G+ +   +P +V
Sbjct: 353 PKLIDA--LANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRV 410

Query: 453 T--IEGCVPRNVACGWWHTLLL 472
              +EG     ++CG WHT ++
Sbjct: 411 NGPLEGIHVSAISCGPWHTAIV 432


>gi|444916088|ref|ZP_21236212.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444712767|gb|ELW53682.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 823

 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 96/267 (35%), Positives = 128/267 (47%), Gaps = 40/267 (14%)

Query: 215 VTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESS 274
           V  + G+ +  VAAGG H LA+     +W WG  G+GQLG+GS     SS  P+      
Sbjct: 83  VDFSNGMVVKRVAAGGSHALAVLSDKTLWAWGRNGDGQLGVGS---TTSSFSPV------ 133

Query: 275 YGKDRSAALSRGSVNSEGPGFRVPGNY---VKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
                                +VPG     V  +A    +SA +   G +LT+G+  YGQ
Sbjct: 134 ---------------------KVPGRTGVEVVAMAASTFNSAAVLSDGKVLTWGYNAYGQ 172

Query: 332 CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
            G GST D+ SP  VS+L    I+GV+ G +H + + S G V+A+G N  GQLG G    
Sbjct: 173 LGNGSTTDQSSPVEVSAL--SDIKGVSVGKYHMLALRSGGTVWAWGFNGSGQLGLGSGSN 230

Query: 392 ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
                   A  L+ V   SVS G  H+  +  DG V+ WG N  GQLG+G   DR  P Q
Sbjct: 231 TQYNTPQQAAVLKGV--ASVSAGDSHSLALRWDGTVWAWGQNNQGQLGIGSFTDRPSPVQ 288

Query: 452 V-TIEGCVPRNVACGWWHTLLLAVPPT 477
           V  + G V   VA G +H L L +  T
Sbjct: 289 VPRLTGVV--EVAAGQFHALALRLDGT 313



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 89/271 (32%), Positives = 124/271 (45%), Gaps = 36/271 (13%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG-----LGSRIRMVSSPH 266
           P  V+      +  VAAGG H+LAL   G++W WG     QLG     LGSR        
Sbjct: 503 PVSVSTASLTDVKNVAAGGFHSLALGSDGKLWSWGSNSLSQLGVSRDTLGSRASPALVSG 562

Query: 267 PIPCIESSYGKDRS-AALSRGSVNSEG--------------PGFRV-----PGNY--VKG 304
               +  + G+  S   LS G V++ G              P F       P N   + G
Sbjct: 563 VSGVVAVAAGETHSLVVLSNGKVSAWGYNGYGQIGDGCSPVPTFYCSSPTEPTNLFSILG 622

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           +A G  HS  +   G +  +G    GQ G GS  D   P  V+ L   ++  V AGL+H+
Sbjct: 623 VAAGQNHSLALRSDGTVWAWGRNNSGQLGDGSLVDRTRPVQVARL--NRVVSVVAGLYHS 680

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           + + SDG V+A+G N  GQLG G    + LP  +  P L  V   +V+ G RH+  +  D
Sbjct: 681 LALRSDGTVWAWGDNGSGQLGDGTYFGQMLP--VQVPGLSGV--VAVAAGGRHSLALRAD 736

Query: 425 GKVFCWGWNKYGQLGLG---DVIDRNIPSQV 452
           G V+ WG+N  GQ+G G    +I R  P +V
Sbjct: 737 GTVWAWGYNSNGQIGDGSDASIIYRPSPVKV 767



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 111/386 (28%), Positives = 158/386 (40%), Gaps = 66/386 (17%)

Query: 102 KAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSP 161
           +AAAG A+ +   + G V+TWG      SG   GD +T   L     +  +  + ++V+ 
Sbjct: 41  RAAAGEAYTLIQRDDGSVWTWG----ANSGGQLGDGTTAYRLASAPVDFSNGMVVKRVA- 95

Query: 162 RSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENL------SAF-PCL 214
                                  GS    +   K       +GD  L      S+F P  
Sbjct: 96  ---------------------AGGSHALAVLSDKTLWAWGRNGDGQLGVGSTTSSFSPVK 134

Query: 215 VTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES- 273
           V    GV +  +AA   ++ A+   G+V  WGY   GQLG GS     SSP  +  +   
Sbjct: 135 VPGRTGVEVVAMAASTFNSAAVLSDGKVLTWGYNAYGQLGNGSTTDQ-SSPVEVSALSDI 193

Query: 274 ---SYGKDRSAALSRGSV---------------NSEGPGFRVP--GNYVKGIA---CGGR 310
              S GK    AL  G                 +     +  P     +KG+A    G  
Sbjct: 194 KGVSVGKYHMLALRSGGTVWAWGFNGSGQLGLGSGSNTQYNTPQQAAVLKGVASVSAGDS 253

Query: 311 HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
           HS  +   G +  +G    GQ G GS  D  SP  V  L G+ +E VAAG +H + +  D
Sbjct: 254 HSLALRWDGTVWAWGQNNQGQLGIGSFTDRPSPVQVPRLTGV-VE-VAAGQFHALALRLD 311

Query: 371 GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
           G V+A+G N  GQLG G   + + P  +  P L  V   SV+ G  H+  +  DG+V+ W
Sbjct: 312 GTVWAWGFNGSGQLGDGTTLSRSSP--VQVPGLTGV--VSVAAGDGHSVAVLSDGRVYTW 367

Query: 431 GWNKYGQLGLG--DVIDRNIPSQVTI 454
           G N  GQLG G  D +    P Q  +
Sbjct: 368 GRNSAGQLGDGSQDALPHPTPGQALL 393



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 79/265 (29%), Positives = 118/265 (44%), Gaps = 47/265 (17%)

Query: 219 PGVR-IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP-------- 269
           PG+  + +VAAG  H++A+   G+V+ WG    GQLG GS+  +   PHP P        
Sbjct: 340 PGLTGVVSVAAGDGHSVAVLSDGRVYTWGRNSAGQLGDGSQDAL---PHPTPGQALLPFV 396

Query: 270 -----------CIE-SSYGKDRSAALSRGSVNSE--GPGFRVP------GNYVKGIAC-- 307
                      C + +S   D  +AL      S   G G +        GN V G  C  
Sbjct: 397 CGNHRLEPEEQCDDGNSINGDGCSALCLAESGSSLCGDGIKAAAEACDDGNLVNGDGCSF 456

Query: 308 -----------GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG 356
                      G + +    + G L  +G    GQ G  ST + L+P  VS+     ++ 
Sbjct: 457 VCRLETPRLVAGAKFTLFQKNDGKLWAWGHNFSGQLGDDSTVNRLTPVSVSTASLTDVKN 516

Query: 357 VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR 416
           VAAG +H++ + SDG ++++G N   QLG   D   +  R   A         +V+ G  
Sbjct: 517 VAAGGFHSLALGSDGKLWSWGSNSLSQLGVSRDTLGS--RASPALVSGVSGVVAVAAGET 574

Query: 417 HTAVIADDGKVFCWGWNKYGQLGLG 441
           H+ V+  +GKV  WG+N YGQ+G G
Sbjct: 575 HSLVVLSNGKVSAWGYNGYGQIGDG 599



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 76/239 (31%), Positives = 107/239 (44%), Gaps = 43/239 (17%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  VAAG  H+LAL   G VW WG    GQLG GS   +V    P+          + A 
Sbjct: 620 ILGVAAGQNHSLALRSDGTVWAWGRNNSGQLGDGS---LVDRTRPV----------QVAR 666

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
           L+R                V  +  G  HS  +   G +  +G    GQ G G+   ++ 
Sbjct: 667 LNR----------------VVSVVAGLYHSLALRSDGTVWAWGDNGSGQLGDGTYFGQML 710

Query: 343 PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPS 402
           P  V  L G+    VAAG  H++ + +DG V+A+G N  GQ+G G D +     ++  PS
Sbjct: 711 PVQVPGLSGV--VAVAAGGRHSLALRADGTVWAWGYNSNGQIGDGSDAS-----IIYRPS 763

Query: 403 LENVHSKS------VSCGARHTAVIADDGKVFCWGWNKYGQLGLG-DVIDRNIPSQVTI 454
              V   S      V+ G  H+  +   G+V  WG N  GQLG   +  DR+ P +VT+
Sbjct: 764 PVKVLFSSQDVVMGVAAGDTHSVAVLSGGRVRTWGQNDSGQLGYATNNTDRSTPGEVTL 822



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 54/167 (32%), Positives = 87/167 (52%), Gaps = 3/167 (1%)

Query: 306 ACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTI 365
           A G  ++ +  D G++ T+G    GQ G G+T   L+   V    G+ ++ VAAG  H +
Sbjct: 43  AAGEAYTLIQRDDGSVWTWGANSGGQLGDGTTAYRLASAPVDFSNGMVVKRVAAGGSHAL 102

Query: 366 CISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDG 425
            + SD  ++A+G N  GQLG G   +   P  +  P    V   +++    ++A +  DG
Sbjct: 103 AVLSDKTLWAWGRNGDGQLGVGSTTSSFSP--VKVPGRTGVEVVAMAASTFNSAAVLSDG 160

Query: 426 KVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           KV  WG+N YGQLG G   D++ P +V+    + + V+ G +H L L
Sbjct: 161 KVLTWGYNAYGQLGNGSTTDQSSPVEVSALSDI-KGVSVGKYHMLAL 206



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 103/349 (29%), Positives = 137/349 (39%), Gaps = 54/349 (15%)

Query: 47  RDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAG 106
           + V  GG   A+A+   + L  WG   D GQ  V S      P   P  T   +V  AA 
Sbjct: 92  KRVAAGGS-HALAVLSDKTLWAWGRNGD-GQLGVGSTTSSFSPVKVPGRTGVEVVAMAAS 149

Query: 107 WAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVS 166
             +  AV   G+V TWG+         +G L  G+  D      QSS +  +VS  S + 
Sbjct: 150 TFNSAAVLSDGKVLTWGYN-------AYGQLGNGSTTD------QSSPV--EVSALSDIK 194

Query: 167 RSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATV 226
               G S G     +   G                 SG       P    +  GV  A+V
Sbjct: 195 ----GVSVGKYHMLALRSGGTVWAWGFNGSGQLGLGSGSNTQYNTPQQAAVLKGV--ASV 248

Query: 227 AAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRG 286
           +AG  H+LAL   G VW WG   +GQLG+GS       P P+                  
Sbjct: 249 SAGDSHSLALRWDGTVWAWGQNNQGQLGIGS---FTDRPSPVQVP--------------- 290

Query: 287 SVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCV 346
                    R+ G  V  +A G  H+  +   G +  +G+   GQ G G+T    SP  V
Sbjct: 291 ---------RLTG--VVEVAAGQFHALALRLDGTVWAWGFNGSGQLGDGTTLSRSSPVQV 339

Query: 347 SSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLP 395
             L G  +  VAAG  H++ + SDG VY +G N  GQLG G   A   P
Sbjct: 340 PGLTG--VVSVAAGDGHSVAVLSDGRVYTWGRNSAGQLGDGSQDALPHP 386



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 115/300 (38%), Gaps = 74/300 (24%)

Query: 57  AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPL-----PTEA----SIVKAAAGW 107
           ++ +  + K+  WG        Y   G+ G+   P P      PTE     SI+  AAG 
Sbjct: 576 SLVVLSNGKVSAWG--------YNGYGQIGDGCSPVPTFYCSSPTEPTNLFSILGVAAGQ 627

Query: 108 AHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSR 167
            H +A+   G V+ WG           G L  G+ +D+     Q + L   VS  + +  
Sbjct: 628 NHSLALRSDGTVWAWGRNNS-------GQLGDGSLVDR-TRPVQVARLNRVVSVVAGLYH 679

Query: 168 SSGGTSSGT----DGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVR- 222
           S    S GT       GSG+ G                  G       P  V   PG+  
Sbjct: 680 SLALRSDGTVWAWGDNGSGQLGD-----------------GTYFGQMLPVQV---PGLSG 719

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  VAAGGRH+LAL   G VW WGY   GQ+G GS   ++  P P+  + SS        
Sbjct: 720 VVAVAAGGRHSLALRADGTVWAWGYNSNGQIGDGSDASIIYRPSPVKVLFSSQ------- 772

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                            + V G+A G  HS  +   G + T+G    GQ G  + + + S
Sbjct: 773 -----------------DVVMGVAAGDTHSVAVLSGGRVRTWGQNDSGQLGYATNNTDRS 815


>gi|224179015|gb|AAI72191.1| hect domain and RLD 2 [synthetic construct]
          Length = 2427

 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 129/255 (50%), Gaps = 29/255 (11%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           V+IA   + G H LAL+  G+V+ WG G  G+LG G  +     P   P + S++   ++
Sbjct: 496 VKIAA-HSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 549

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                             G +V  IACG  +SA IT  G L T+G G YG+ G GS++DE
Sbjct: 550 ------------------GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 591

Query: 341 LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
             P  V+ L G+++  VA  +G   T+ ++ +G V+++G   +G+LG GG      P+L+
Sbjct: 592 AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLI 651

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGC 457
           +   L+++    V CG++ +  +  DG+V+ WG     +LG G       P  +  ++G 
Sbjct: 652 E--KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGK 709

Query: 458 VPRNVACGWWHTLLL 472
              +VA G  H L L
Sbjct: 710 KVIDVAAGSTHCLAL 724



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 92/217 (42%), Gaps = 38/217 (17%)

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
           SS DE   A P LV    G+++  VA  +G   TLA+++ GQVW WG G  G+LG G   
Sbjct: 587 SSEDE---AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG--- 640

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITD 317
                                     GS   + P    ++    V  + CG + S  +T 
Sbjct: 641 --------------------------GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTK 674

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
            G + ++G G   + G G+ +    P  +  L G ++  VAAG  H + ++ D +V+++G
Sbjct: 675 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
            N   Q         T P     P L+  H   ++CG
Sbjct: 735 SN--DQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769


>gi|432092257|gb|ELK24881.1| Putative E3 ubiquitin-protein ligase HERC1 [Myotis davidii]
          Length = 4856

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/307 (28%), Positives = 129/307 (42%), Gaps = 88/307 (28%)

Query: 232  HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
            H++AL++ G+V+ WG G  G+LG G+  R    P  I  ++                   
Sbjct: 4079 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQ------------------- 4118

Query: 292  GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                   G  V  ++CG +HSAV+T  G L TFG G YG+ G G+T ++  P  V++L G
Sbjct: 4119 -------GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4171

Query: 352  IQIE---------GVAAGLWHTICISSDGD-VYAFGGNQFGQLGTGGDQAETLPRLLDA- 400
             QI           VA GL HT+ +S+DG  V+AFG   +G+LG G   A++ P+ +D  
Sbjct: 4172 YQIGQARNKSIICSVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL 4231

Query: 401  -------------------------------------------------PSLENVHSKSV 411
                                                             P L  V  + V
Sbjct: 4232 CGIGIKKVACGTQFSVALTKDGQVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDV 4291

Query: 412  SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACGWWHTL 470
            + GA HT  +   G ++ WG N  GQLGLG       P+ VT+ +G   R ++ G  H+ 
Sbjct: 4292 AVGAEHTLALTSTGDIYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSA 4351

Query: 471  LLAVPPT 477
                PP 
Sbjct: 4352 AWTAPPV 4358



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 67/209 (32%), Positives = 107/209 (51%), Gaps = 15/209 (7%)

Query: 275  YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
            +G  R   L+    N   P      +  + + CG   + VI   G +L  G G YG+ GQ
Sbjct: 3988 WGAGRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQ 4047

Query: 335  GSTDDELSPNCVSSLLGIQIEGVAAGLW---HTICISSDGDVYAFGGNQFGQLGTGGDQA 391
            G++DD      +S+L G  +  +        H++ ++  G+V+++G   +G+LG G    
Sbjct: 4048 GNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDR 4107

Query: 392  ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
            +  PR ++A   E V    +SCG +H+AV+  DGK+F +G   YG+LGLG+  ++ +P +
Sbjct: 4108 QRRPRQIEALQGEEV--VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPER 4165

Query: 452  VT-IEGC---VPRN------VACGWWHTL 470
            VT +EG      RN      VACG  HTL
Sbjct: 4166 VTALEGYQIGQARNKSIICSVACGLNHTL 4194



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 109/393 (27%), Positives = 163/393 (41%), Gaps = 66/393 (16%)

Query: 41   TVGSAWRDVCGGGCGFAMAISD--------SRKLITWGSTDDLGQSYVTSGKHGEIPEPF 92
            +   A + +CG  C F +  +         S   +  G++DDL    V S   G +    
Sbjct: 4011 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVV--- 4067

Query: 93   PLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQS 152
                   +V +     H +A+TE GEV++WG  +       +G L  G   D+    RQ 
Sbjct: 4068 -----TQLVTSCGSDGHSMALTESGEVFSWGDGD-------YGKLGHGNS-DRQRRPRQI 4114

Query: 153  SFLT-EQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDEN 207
              L  E+V   S   + S   +S  DG+    G+G+ G    R+ L   + +        
Sbjct: 4115 EALQGEEVVQMSCGFKHSAVVTS--DGKLFTFGNGDYG----RLGLGNTSNKKLPERVTA 4168

Query: 208  LSAFPCLVTLNPGVRIATVAAGGRHTLALS-DIGQVWGWGYGGEGQLGLGSRIRMVSSPH 266
            L  +      N  + I +VA G  HTLA+S D   VW +G G  G+LGLG+     SSP 
Sbjct: 4169 LEGYQIGQARNKSI-ICSVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK-SSPQ 4226

Query: 267  PIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGW 326
             +  +                           G  +K +ACG + S  +T  G + TFG 
Sbjct: 4227 KVDVL--------------------------CGIGIKKVACGTQFSVALTKDGQVYTFGQ 4260

Query: 327  GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
                   +G   +   P  V  L G+ IE VA G  HT+ ++S GD+YA+G N  GQLG 
Sbjct: 4261 DRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALTSTGDIYAWGSNSEGQLGL 4320

Query: 387  GGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            G       P L+     +NV  + +S G  H+A
Sbjct: 4321 GHTNHVREPTLVTVLQGKNV--RQISAGRCHSA 4351



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 95/174 (54%), Gaps = 5/174 (2%)

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
           + I  G   + VI+  G++   G G YG+ G G ++++ +   ++      I+ V++   
Sbjct: 406 QTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKG 465

Query: 363 ---HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
              HT+  +++G+V+++G   +G+LG G    +  P+L+  P L+      VS G RH+A
Sbjct: 466 SDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCVSAGYRHSA 524

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
            + +DG+++ WG   +G+LG GD   RNIP+ V     V   V+CG  HT+ L+
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG-EVSCGSSHTIALS 577



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 132/298 (44%), Gaps = 35/298 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAG---GRHTLALSDIGQVWGWGYGGEGQLGLGSRI- 259
           GD N  +    +T  P   I  V++      HTLA +  G+V+ WG G  G+LG G+   
Sbjct: 438 GDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSST 497

Query: 260 ----RMVSSP---HPIPCIESSY---------------GKDRSAALSRGSVNSEG-PGFR 296
               +++  P     + C+ + Y               G+     L  G  NS   P   
Sbjct: 498 QKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557

Query: 297 VPGNYVKGIACGGRHSAVITDAGALL-TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
              + V  ++CG  H+  ++  G  + +FG G  G+ G G T+    P  + +L G+ I 
Sbjct: 558 KDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIR 617

Query: 356 GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL-PRLLDAPSLENVHSKSVSCG 414
            V AG   ++ ++S G VYA+G      LG G  +A  L P+L++   L       +S G
Sbjct: 618 KVCAGSQSSLSLTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE--ELAATRIVDISIG 673

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVI-DRNIPSQVT-IEGCVPRNVACGWWHTL 470
             H   ++ D +V+ WG N  GQ G G+       P +V+ ++G   + V+ G  H+L
Sbjct: 674 DSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQVSAGTSHSL 731



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 109/244 (44%), Gaps = 31/244 (12%)

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
           T+ AG   T  +S  G V   G G  G+LGLG       S +     + ++   RS    
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLG------DSNNQSTLKKLTFEPHRSIKKV 460

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN 344
             S  S+G                  H+   T  G + ++G G YG+ G G++  +  P 
Sbjct: 461 SSSKGSDG------------------HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPK 502

Query: 345 CVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSL 403
            +   L G  +  V+AG  H+  ++ DG++Y +G   FG+LG G   +  +P L+    +
Sbjct: 503 LIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK--DI 560

Query: 404 ENVHSKSVSCGARHTAVIADDGK-VFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRN 461
            NV    VSCG+ HT  ++ DG+ V+ +G    G+LG GD      P  +  ++G   R 
Sbjct: 561 SNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK 618

Query: 462 VACG 465
           V  G
Sbjct: 619 VCAG 622



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 130/324 (40%), Gaps = 67/324 (20%)

Query: 52  GGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVK-AAAGWA 108
           G  G  +A +   ++ +WG  D   LG    ++ K+   P+    P +  +V   +AG+ 
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY---PKLIQGPLQGKVVVCVSAGYR 521

Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRS 168
           H  AVTE GE+YTWG  +       FG L  G     D   R    L + +S   +VS  
Sbjct: 522 HSAAVTEDGELYTWGEGD-------FGRLGHG-----DSNSRNIPTLVKDISNVGEVSCG 569

Query: 169 SGGTSS-GTDGR-----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVR 222
           S  T +   DGR     G G+ G                  GD N    P ++    G+ 
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKL--------------GHGDTNRVYKPKVIEALQGMF 615

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V AG + +L+L+  GQV+ WG G    LG GS       P  I              
Sbjct: 616 IRKVCAGSQSSLSLTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE------------- 660

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                         +    +  I+ G  H   ++    +  +G    GQCGQG++   ++
Sbjct: 661 -------------ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPIT 707

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTI 365
            P  VS L GI I+ V+AG  H++
Sbjct: 708 KPKKVSGLDGIAIQQVSAGTSHSL 731



 Score = 45.4 bits (106), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 4/89 (4%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           +S   +VY +G N   QL  G  +    P+L  APS  +  ++++  G   T VI+ DG 
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKL--APSFSD--AQTIEAGQYCTFVISTDGS 423

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
           V   G   YG+LGLGD  +++   ++T E
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFE 452


>gi|282722854|gb|ADA84473.1| retinitis pigmentosa GTPase regulator protein 2 1-17 isoform [Danio
           rerio]
          Length = 708

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 96/293 (32%), Positives = 139/293 (47%), Gaps = 48/293 (16%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS--------RIRMVSSPHPIPCIES 273
           R+   A G  HTL  +  G ++  G   EGQLGLG          +   +   PI  +  
Sbjct: 89  RVKLTACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIKML-- 146

Query: 274 SYGKDRSAALS-------RGSVNSEG------------PGFRVPGNYVKGIACGGRHSAV 314
           + G + SAAL+       RG  NSEG            P     G  V  ++CG  HSA 
Sbjct: 147 AAGSNTSAALTQDGRLYMRGD-NSEGQIGLGKESNALTPQEVSVGKRVFWVSCGYYHSAF 205

Query: 315 ITDAGALLTFGWGLYGQCGQGSTD--DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGD 372
           +T  GAL TFG    G+ G  +    +   P  V+ +    ++ VA G  HT+ ++ + +
Sbjct: 206 VTVDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPDRVVQ-VACGGGHTVALT-ENE 263

Query: 373 VYAFGGNQFGQLGTGGDQAET-LPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWG 431
           VY+FG  QFGQLG G    E+ LPR+++         K  +CG  HTA+I D+G ++ +G
Sbjct: 264 VYSFGLGQFGQLGHGTFIFESRLPRVVE--HFRKGRVKHAACGENHTALITDNGLLYTFG 321

Query: 432 WNKYGQLGLGDVIDRNIPSQVTIEGCVPR-------NVACGWWHTLLLAVPPT 477
             ++G+LGLG   + N  +Q     C PR       +V CG  H L+LA P T
Sbjct: 322 DGRHGKLGLG---EENFTNQFKPTLC-PRFLDYHVHSVTCGGCHMLVLAKPRT 370



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 93/170 (54%), Gaps = 2/170 (1%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           I+CG  H+A++T+ G L  FG   +GQ G G+      P CV +L   +++  A G  HT
Sbjct: 41  ISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALRSERVKLTACGRTHT 100

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           +  +S G++YA GGN  GQLG G     T   L++  + +    K ++ G+  +A +  D
Sbjct: 101 LVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGP-IKMLAAGSNTSAALTQD 159

Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAV 474
           G+++  G N  GQ+GLG   +   P +V++ G     V+CG++H+  + V
Sbjct: 160 GRLYMRGDNSEGQIGLGKESNALTPQEVSV-GKRVFWVSCGYYHSAFVTV 208



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 19/111 (17%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPS---LENVHSKSVSCGARHTAVIAD 423
           I   G V+ FG ++F                 +APS   L+N     +SCG  HTA++ +
Sbjct: 9   IPESGAVFTFGKSKFAD---------------NAPSKFWLKNDVPLRISCGDEHTALVTE 53

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLA 473
           +GK+F +G N +GQLGLG     N P+ V  +     +  ACG  HTL+  
Sbjct: 54  NGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALRSERVKLTACGRTHTLVFT 104


>gi|242071255|ref|XP_002450904.1| hypothetical protein SORBIDRAFT_05g020900 [Sorghum bicolor]
 gi|241936747|gb|EES09892.1| hypothetical protein SORBIDRAFT_05g020900 [Sorghum bicolor]
          Length = 418

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 127/264 (48%), Gaps = 44/264 (16%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI-RMVSSPHPIPCIESSYGKDRS 280
           R+  V+AG  H+ A++  G+++ WG    GQLGLG    ++VS+P  + C+         
Sbjct: 119 RVVEVSAGNHHSCAVTADGKLFVWGRNSGGQLGLGKGAGKVVSTPTKVDCLTD------- 171

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGS---- 336
                         FR+     K +A G  HS  +T+ G +L++G    G+ G G     
Sbjct: 172 --------------FRI-----KMVALGSEHSIAVTEEGEVLSWGAAGSGRLGHGRQSSI 212

Query: 337 -----TDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
                T  E +P  + +  GI+I+ +AAG+ H+ CI   G ++ FG  Q  + G G    
Sbjct: 213 LGFSLTTSEYTPRLIKNFDGIKIKKIAAGMLHSACIDEKGTLFIFG--QKTEKGFGRSNE 270

Query: 392 ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG--DVIDRNIP 449
              P +++    E   S+ V+CG  HT V+ D G ++ WG N+ G LGLG  D++     
Sbjct: 271 AFRPNIVE----EIPFSEEVACGGYHTCVVTDSGDLYSWGSNENGCLGLGGTDMVCSPEI 326

Query: 450 SQVTIEGCVPRNVACGWWHTLLLA 473
            + ++       V+CGW HT +++
Sbjct: 327 LKSSLFKLPVSKVSCGWKHTAVIS 350



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 113/397 (28%), Positives = 170/397 (42%), Gaps = 63/397 (15%)

Query: 91  PFPLPTEASI-VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFE 149
           PF L   A      A G AH + +T+ G V+  G  +       FG L  G+ +   +  
Sbjct: 58  PFFLARAADPPASLACGGAHTLFLTQSGRVFATGLND-------FGQLGVGSSVTHTLEP 110

Query: 150 RQSSFLTEQVSPRSQVSRSSGGTSSGTD----GRGSGEEGSKRRRISLAKQTAESSSSGD 205
            + S   E+V   S  +  S   ++       GR SG +      + L K   +  S+  
Sbjct: 111 VEVSGFHERVVEVSAGNHHSCAVTADGKLFVWGRNSGGQ------LGLGKGAGKVVST-- 162

Query: 206 ENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSP 265
                 P  V      RI  VA G  H++A+++ G+V  WG  G G+LG G +  ++   
Sbjct: 163 ------PTKVDCLTDFRIKMVALGSEHSIAVTEEGEVLSWGAAGSGRLGHGRQSSILG-- 214

Query: 266 HPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFG 325
                    +    S    R   N +G         +K IA G  HSA I + G L  FG
Sbjct: 215 ---------FSLTTSEYTPRLIKNFDGI-------KIKKIAAGMLHSACIDEKGTLFIFG 258

Query: 326 WGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLG 385
                + G G +++   PN V  +     E VA G +HT  ++  GD+Y++G N+ G LG
Sbjct: 259 QKT--EKGFGRSNEAFRPNIVEEI--PFSEEVACGGYHTCVVTDSGDLYSWGSNENGCLG 314

Query: 386 TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGW------------N 433
            GG      P +L + SL  +    VSCG +HTAVI+ D  ++ WGW            +
Sbjct: 315 LGGTDMVCSPEILKS-SLFKLPVSKVSCGWKHTAVISGD-DIYTWGWGGANGTFFEEGHS 372

Query: 434 KYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACGWWHT 469
             GQLG G+ +D   P  V   +     +V+CG+ HT
Sbjct: 373 SGGQLGHGNDVDYFEPMMVPFGKNARAVHVSCGFNHT 409



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 118/445 (26%), Positives = 178/445 (40%), Gaps = 87/445 (19%)

Query: 9   KMERVVFMWGYLP------GALPQR-SPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAIS 61
           + +RV  +WG         G L  R SP + P    L           CGG     + ++
Sbjct: 27  RRQRVAALWGNGDYGRLGLGVLESRWSPTVCPFF--LARAADPPASLACGGA--HTLFLT 82

Query: 62  DSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLP-TEASIVKAAAGWAHCVAVTEGGEVY 120
            S ++   G  +D GQ  V S     + EP  +      +V+ +AG  H  AVT  G+++
Sbjct: 83  QSGRVFATG-LNDFGQLGVGSSVTHTL-EPVEVSGFHERVVEVSAGNHHSCAVTADGKLF 140

Query: 121 TWGWKECVPSGRVFGDLSTGTGLDKDV-----FERQSSFLTEQVSPRSQ----VSRSSGG 171
            WG      SG   G L  G G  K V      +  + F  + V+  S+    V+     
Sbjct: 141 VWGRN----SG---GQLGLGKGAGKVVSTPTKVDCLTDFRIKMVALGSEHSIAVTEEGEV 193

Query: 172 TSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGR 231
            S G  G G    G +   +  +  T+E +          P L+    G++I  +AAG  
Sbjct: 194 LSWGAAGSGRLGHGRQSSILGFSLTTSEYT----------PRLIKNFDGIKIKKIAAGML 243

Query: 232 HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
           H+  + + G ++ +G   E   G                        RS    R ++  E
Sbjct: 244 HSACIDEKGTLFIFGQKTEKGFG------------------------RSNEAFRPNIVEE 279

Query: 292 GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCV-SSLL 350
            P       + + +ACGG H+ V+TD+G L ++G    G  G G TD   SP  + SSL 
Sbjct: 280 IP-------FSEEVACGGYHTCVVTDSGDLYSWGSNENGCLGLGGTDMVCSPEILKSSLF 332

Query: 351 GIQIEGVAAGLWHTICISSDGDVYAFG-----GNQF-------GQLGTGGDQAETLPRLL 398
            + +  V+ G  HT  IS D D+Y +G     G  F       GQLG G D     P ++
Sbjct: 333 KLPVSKVSCGWKHTAVISGD-DIYTWGWGGANGTFFEEGHSSGGQLGHGNDVDYFEPMMV 391

Query: 399 DAPSLENVHSKSVSCGARHTAVIAD 423
             P  +N  +  VSCG  HT  I +
Sbjct: 392 --PFGKNARAVHVSCGFNHTGAIYE 414



 Score = 39.3 bits (90), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 16/86 (18%)

Query: 377 GGNQFGQLGTGGDQAE--------TLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVF 428
           G   +G+LG G  ++          L R  D P+       S++CG  HT  +   G+VF
Sbjct: 36  GNGDYGRLGLGVLESRWSPTVCPFFLARAADPPA-------SLACGGAHTLFLTQSGRVF 88

Query: 429 CWGWNKYGQLGLGDVIDRNI-PSQVT 453
             G N +GQLG+G  +   + P +V+
Sbjct: 89  ATGLNDFGQLGVGSSVTHTLEPVEVS 114


>gi|440790434|gb|ELR11717.1| regulator of chromosome condensation (RCC1) repeat domain containing
            protein [Acanthamoeba castellanii str. Neff]
          Length = 1563

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 96/321 (29%), Positives = 144/321 (44%), Gaps = 47/321 (14%)

Query: 154  FLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPC 213
            FLT  +    +  R+        + R  G E         ++Q    SS G  N+  F  
Sbjct: 821  FLTTLLMLNHRRKRNEAHLPPKVEKRNLGPE---------SEQDDGVSSGGKLNV-PFGG 870

Query: 214  LVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES 273
            LV++    ++  V+ G  H  AL++ G V+ WG  G G+LG G +   V   HP   I  
Sbjct: 871  LVSMR---QVVNVSCGWNHCAALTENGHVYTWGRNGSGELGHGDK-SGVPQLHPKQVI-- 924

Query: 274  SYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCG 333
             + K +                      VK + CGG H+   T++G++  +G G  GQ G
Sbjct: 925  -FFKSKC---------------------VKEVVCGGEHTLARTESGSVYGWGNGRIGQLG 962

Query: 334  QGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAET 393
             G       P  + +L  + +  +AAG  HTI +   G+V  FGG + GQLGTG  +   
Sbjct: 963  LGDRTLHWLPVPIKTLRKMHVTQLAAGYAHTIVVLKSGEVMVFGGGEVGQLGTGMRKDLL 1022

Query: 394  LPRLLDA-PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVI--DRNIPS 450
            +P  L A PS+        +CG  HTA++ + G+V+  G    GQLG  D +  DR  P 
Sbjct: 1023 VPTKLQAMPSIVQ-----AACGYCHTALLTEAGEVYTCGSAMSGQLGHADNLQNDRLAPK 1077

Query: 451  QVT-IEGCVPRNVACGWWHTL 470
             V  + G   R +ACG +HT+
Sbjct: 1078 MVEGLNGKRIRFIACGSFHTI 1098



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 118/423 (27%), Positives = 179/423 (42%), Gaps = 73/423 (17%)

Query: 80   VTSGKHGEIPEPFP-LPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLS 138
            V+SG  G++  PF  L +   +V  + GW HC A+TE G VYTWG       G   GD S
Sbjct: 858  VSSG--GKLNVPFGGLVSMRQVVNVSCGWNHCAALTENGHVYTWGRNGSGELGH--GDKS 913

Query: 139  TGTGLD-KDVFERQSSFLTEQVS-PRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQ 196
                L  K V   +S  + E V      ++R+  G+  G      G+ G           
Sbjct: 914  GVPQLHPKQVIFFKSKCVKEVVCGGEHTLARTESGSVYGWGNGRIGQLG----------- 962

Query: 197  TAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLG 256
                   GD  L   P  +     + +  +AAG  HT+ +   G+V  +G G  GQLG G
Sbjct: 963  ------LGDRTLHWLPVPIKTLRKMHVTQLAAGYAHTIVVLKSGEVMVFGGGEVGQLGTG 1016

Query: 257  SRIRMV--SSPHPIPCI-ESSYGKDRSAALSR-GSVNSEGPGFR---------------- 296
             R  ++  +    +P I +++ G   +A L+  G V + G                    
Sbjct: 1017 MRKDLLVPTKLQAMPSIVQAACGYCHTALLTEAGEVYTCGSAMSGQLGHADNLQNDRLAP 1076

Query: 297  -----VPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE--------LSP 343
                 + G  ++ IACG  H+  ITD   + T+G G+ G    G+   E        ++P
Sbjct: 1077 KMVEGLNGKRIRFIACGSFHTIAITDLDNVYTWG-GVQGTDSDGAMRQERKAAILKRVTP 1135

Query: 344  NCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQ---------LGTGGDQAETL 394
            + V  L+G +I  V+ G  H++  + DG+VY +      Q         L T     E  
Sbjct: 1136 SIVKGLMGKRISLVSCGHAHSVATTMDGEVYVWSSTGSLQPPLLLRGSGLSTASGTTEA- 1194

Query: 395  PRLLDA-PSLENVHSKSV----SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIP 449
            P L+ A P  ++  SK V    + G   T V+ ++G ++ WG   +GQLGLGD  DR   
Sbjct: 1195 PLLVSAIPDGQDAKSKPVVKHAAAGEEFTLVVTENGLLYSWGSGAFGQLGLGDQGDRAEI 1254

Query: 450  SQV 452
             QV
Sbjct: 1255 VQV 1257


>gi|410957262|ref|XP_003985250.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Felis catus]
          Length = 1031

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 120/255 (47%), Gaps = 34/255 (13%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           +R+  V+ G  H+LA+   G+V+ WG G EGQLG+G    +   P  I  +         
Sbjct: 86  LRVELVSCGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFKEINLIPQKIKTL--------- 136

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DD 339
                             G  +  ++CG  HS  +++ G + ++G   +GQ G G     
Sbjct: 137 -----------------TGIKIIQVSCGNYHSLALSEDGQVFSWGSNSHGQLGLGKELPS 179

Query: 340 ELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL---PR 396
           + SP  V SL GI +  VAAG  H+  +S  G  + +G N  GQL   G         PR
Sbjct: 180 QASPQRVRSLDGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQLAFFGSNVPVQSYKPR 239

Query: 397 LLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IE 455
            + A  L+ +    +SCG  HTAV+  +GKVF +G N  GQLG     ++  P  +  IE
Sbjct: 240 SVSA--LKTLGVVYISCGHEHTAVLTQNGKVFTFGDNSCGQLGHSPTAEKTGPQLMEGIE 297

Query: 456 GCVPRNVACGWWHTL 470
           G V + + CG +HTL
Sbjct: 298 GLVSQ-IDCGSYHTL 311



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 60/190 (31%), Positives = 98/190 (51%), Gaps = 17/190 (8%)

Query: 292 GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
           GPG    G  ++  A G RHS ++   GA+ + G    GQ G+     E  P  + +L  
Sbjct: 30  GPG----GPELRQAASGERHSLLLLSDGAVHSCGDNSRGQLGRRGLQREEQPKPIQALET 85

Query: 352 IQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGG-DQAETLPRLLDAPSLENVHSKS 410
           +++E V+ G  H++ +   G V+A+G    GQLG G   +   +P+ +   +L  +    
Sbjct: 86  LRVELVSCGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFKEINLIPQKIK--TLTGIKIIQ 143

Query: 411 VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV------TIEGCVPRNVAC 464
           VSCG  H+  +++DG+VF WG N +GQLGLG    + +PSQ       +++G     VA 
Sbjct: 144 VSCGNYHSLALSEDGQVFSWGSNSHGQLGLG----KELPSQASPQRVRSLDGIPLAQVAA 199

Query: 465 GWWHTLLLAV 474
           G  H+  L++
Sbjct: 200 GGAHSFALSL 209



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 66/232 (28%), Positives = 108/232 (46%), Gaps = 37/232 (15%)

Query: 206 ENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSP 265
           + ++  P  +    G++I  V+ G  H+LALS+ GQV+ WG    GQLGLG  +   +SP
Sbjct: 124 KEINLIPQKIKTLTGIKIIQVSCGNYHSLALSEDGQVFSWGSNSHGQLGLGKELPSQASP 183

Query: 266 HPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFG 325
             +  ++                          G  +  +A GG HS  ++ +G   +FG
Sbjct: 184 QRVRSLD--------------------------GIPLAQVAAGGAHSFALSLSGT--SFG 215

Query: 326 WGLY--GQC---GQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
           WG    GQ    G         P  VS+L  + +  ++ G  HT  ++ +G V+ FG N 
Sbjct: 216 WGSNNAGQLAFFGSNVPVQSYKPRSVSALKTLGVVYISCGHEHTAVLTQNGKVFTFGDNS 275

Query: 381 FGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
            GQLG      +T P+L++   +E + S+ + CG+ HT A +   G+V  +G
Sbjct: 276 CGQLGHSPTAEKTGPQLMEG--IEGLVSQ-IDCGSYHTLAYVYTTGQVVSFG 324



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 79/300 (26%), Positives = 121/300 (40%), Gaps = 59/300 (19%)

Query: 87  EIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKD 146
           E P+P        +   + G  H +AV   G V+ WG      +G   G L  G   + +
Sbjct: 75  EQPKPIQALETLRVELVSCGKEHSLAVCYKGRVFAWG------AGSE-GQLGIGEFKEIN 127

Query: 147 VFERQSSFLTEQVSPRSQVSRSSGGTSS---GTDGR----GSGEEGSKRRRISLAKQTAE 199
           +  ++   LT        +  S G   S     DG+    GS   G    ++ L K+   
Sbjct: 128 LIPQKIKTLT----GIKIIQVSCGNYHSLALSEDGQVFSWGSNSHG----QLGLGKELPS 179

Query: 200 SSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG-LGSR 258
            +S         P  V    G+ +A VAAGG H+ ALS  G  +GWG    GQL   GS 
Sbjct: 180 QAS---------PQRVRSLDGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQLAFFGSN 230

Query: 259 IRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDA 318
           +           ++S   +  SA  + G V                I+CG  H+AV+T  
Sbjct: 231 VP----------VQSYKPRSVSALKTLGVVY---------------ISCGHEHTAVLTQN 265

Query: 319 GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFG 377
           G + TFG    GQ G   T ++  P  +  + G+ +  +  G +HT+  + + G V +FG
Sbjct: 266 GKVFTFGDNSCGQLGHSPTAEKTGPQLMEGIEGL-VSQIDCGSYHTLAYVYTTGQVVSFG 324


>gi|338533363|ref|YP_004666697.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
 gi|337259459|gb|AEI65619.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
          Length = 1379

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 87/285 (30%), Positives = 127/285 (44%), Gaps = 28/285 (9%)

Query: 209  SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS----- 263
            S  P  V +     +A +AAG  HTLA+   G VW WG    GQLG G+  + ++     
Sbjct: 1015 SLTPVQVQVQGLTGVAAIAAGFSHTLAVRQDGTVWSWGGNAYGQLGDGTTAQSLTPVQVQ 1074

Query: 264  -----------SPHPIPCIES----SYGKDRSAALSRGSVNSEGPGFRVPG-NYVKGIAC 307
                         H +         ++G++    L  G+        +V G   V  IA 
Sbjct: 1075 GLTGVTAISAGDAHTVALRRDGTVWAWGRNSWGQLGDGTTTHRATPVQVQGLTGVIAIAA 1134

Query: 308  GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI 367
            G  H+  +   G +  +G   +GQ G G+T    +P  V  L G+    +AAG  HT+ +
Sbjct: 1135 GSLHTVALRQDGTVWAWGRNSWGQLGDGTTTHRATPVQVQGLTGV--IAIAAGSLHTVAL 1192

Query: 368  SSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKV 427
              DG V+A+G N  GQLG G     T  RL  A         +++ G  HTA +  DG  
Sbjct: 1193 RQDGTVWAWGFNDLGQLGDG----TTTRRLTPAQVQGLTGVTTIAAGYFHTAAVRQDGTA 1248

Query: 428  FCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
            + WG+N +GQLG G   DR  P QV     V   +A G+ HT+++
Sbjct: 1249 WTWGFNLWGQLGDGTFTDRATPVQVQGLTGVSA-LAAGYAHTVVV 1292



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 104/377 (27%), Positives = 156/377 (41%), Gaps = 50/377 (13%)

Query: 100  IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQV 159
            +   AAG++H +AV + G V++WG       G  +G L  GT           S    QV
Sbjct: 1029 VAAIAAGFSHTLAVRQDGTVWSWG-------GNAYGQLGDGT--------TAQSLTPVQV 1073

Query: 160  SPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
               + V+  S G +     R  G   +  R              GD   +     V +  
Sbjct: 1074 QGLTGVTAISAGDAHTVALRRDGTVWAWGRN--------SWGQLGDGTTTHRATPVQVQG 1125

Query: 220  GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS---------------- 263
               +  +AAG  HT+AL   G VW WG    GQLG G+     +                
Sbjct: 1126 LTGVIAIAAGSLHTVALRQDGTVWAWGRNSWGQLGDGTTTHRATPVQVQGLTGVIAIAAG 1185

Query: 264  SPHPIPCIES----SYGKDRSAALSRGSVNSEGPGFRVPG-NYVKGIACGGRHSAVITDA 318
            S H +   +     ++G +    L  G+        +V G   V  IA G  H+A +   
Sbjct: 1186 SLHTVALRQDGTVWAWGFNDLGQLGDGTTTRRLTPAQVQGLTGVTTIAAGYFHTAAVRQD 1245

Query: 319  GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            G   T+G+ L+GQ G G+  D  +P  V  L G+    +AAG  HT+ +  DG V+A+G 
Sbjct: 1246 GTAWTWGFNLWGQLGDGTFTDRATPVQVQGLTGV--SALAAGYAHTVVVGEDGTVWAWGN 1303

Query: 379  NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
            N   QLG G     + P  ++A +     + S++ G  HT  ++ DG  + WG N  GQ+
Sbjct: 1304 NSGTQLGNGSSTDRSTPVQVEALT----GAFSLAAGRFHTVAMSPDGAGWGWGRNNLGQV 1359

Query: 439  GLGDVIDRNIPSQVTIE 455
            G G   DR  P  V ++
Sbjct: 1360 GDGTTADRPTPVNVMVQ 1376



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 91/286 (31%), Positives = 122/286 (42%), Gaps = 28/286 (9%)

Query: 209  SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG---LGSRIRMVSSP 265
            S  P  V +   + +  +AAGG H  A    G +W WG    GQLG   L  R+  V   
Sbjct: 863  SLTPVQVQVQGLMDVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSYRLLPVQVQ 922

Query: 266  HPIPCIESSYGKDRSAA------LSRGSVNSEGPGFRVPGNY------------VKGIAC 307
              +     + G    AA      L    +NS G     P +Y            V  +A 
Sbjct: 923  GLMDVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSYRLLPVQVQGLMSVTAMAA 982

Query: 308  GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI 367
            GG H A     G L T+G   YGQ G G     L+P  V       +  +AAG  HT+ +
Sbjct: 983  GGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSQSLTPVQVQVQGLTGVAAIAAGFSHTLAV 1042

Query: 368  SSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKV 427
              DG V+++GGN +GQLG G       P  +    L  V   ++S G  HT  +  DG V
Sbjct: 1043 RQDGTVWSWGGNAYGQLGDGTTAQSLTP--VQVQGLTGV--TAISAGDAHTVALRRDGTV 1098

Query: 428  FCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
            + WG N +GQLG G    R  P QV  + G +   +A G  HT+ L
Sbjct: 1099 WAWGRNSWGQLGDGTTTHRATPVQVQGLTGVIA--IAAGSLHTVAL 1142



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 110/424 (25%), Positives = 165/424 (38%), Gaps = 59/424 (13%)

Query: 53  GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
           G GFA+A+     L  WGS     LG    T G +     P  +     +   AA   H 
Sbjct: 279 GGGFAVALRQDGTLWAWGSNSRGQLGNG-TTFGSY----RPEQVQGLTGVTAIAASGIHT 333

Query: 111 VAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSG 170
           VA+ + G ++ WG           G L  GT   +        F   QV   + V+  + 
Sbjct: 334 VALRQDGTLWAWGNNSS-------GQLGDGTTTVR--------FTPVQVQGLTGVTAIAA 378

Query: 171 GTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGG 230
           G              SK+     A    E    GD   +     V +     +  +AAG 
Sbjct: 379 GYLY--------TVASKQDGTVWAWGDNEWGQLGDGTTTRRLTPVQVQGLTGVTAIAAGY 430

Query: 231 RHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES----------------- 273
            +T+A    G VW WG     QLG G+ +    +P  +  +E                  
Sbjct: 431 LYTVASKQDGTVWAWGDNKRSQLGEGA-VSQRHTPGEVQGLEGITAIAASNLLTVAVRQD 489

Query: 274 ----SYGKDRSAALSRGSVNSEGPGFRVPGNY-VKGIACGGRHSAVITDAGALLTFGWGL 328
               ++G +    L  G+        +V G   V  +A    H   +   G +  +G G 
Sbjct: 490 GTVWAWGDNARGQLGDGTTTRRLTPVQVQGLAGVTAVAASDYHLVAVRQDGTVWAWGVGF 549

Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGG 388
           +GQ G G+  D  +P  V  L G+    +AAG  HT+ +  DG V+A+G N +GQLG G 
Sbjct: 550 WGQLGDGTGMDRSTPVQVQGLTGV--TAIAAGSNHTVALRQDGTVWAWGFNNYGQLGDGT 607

Query: 389 DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNI 448
                 P  +  P +    + +++ G  HT  +  DG V+ WG+N +GQLG G    R+ 
Sbjct: 608 TAGHLTP--VQVPGVTG--AVAIAAGGSHTVALLQDGTVWTWGYNIWGQLGDGTTTHRHS 663

Query: 449 PSQV 452
           P QV
Sbjct: 664 PVQV 667



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 107/251 (42%), Gaps = 23/251 (9%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR----------------MVSSPH 266
           +  +A    HT+A+   G VW WG    GQLG G+  +                + SS  
Sbjct: 673 VIAIATNNGHTVAVRQDGTVWTWGLNSSGQLGDGTTTQRLTPVQVHGLTDATAILTSSSQ 732

Query: 267 PIPCIES----SYGKDRSAALSRGSVNSEGPGFRVPGNY-VKGIACGGRHSAVITDAGAL 321
            +   +     ++G +    L  G+        +V G   V  +A GG H A     G L
Sbjct: 733 TVAMRQDRTLWAWGDNHWGQLGDGTTTRRLTPVQVQGLMDVTAMAAGGYHMAAAGQDGTL 792

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
            T+G   YGQ G G     L P  V  L       +AAG  HT+ +  DG V+A+G N  
Sbjct: 793 WTWGLNSYGQLGGGPLSYRLLPVQVQGLTSATATAIAAGDSHTVAVRQDGTVWAWGSNFS 852

Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
           GQLG G       P  +    L +V   +++ G  H A    DG ++ WG N YGQLG G
Sbjct: 853 GQLGDGTTAQSLTPVQVQVQGLMDV--TAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGG 910

Query: 442 DVIDRNIPSQV 452
            +  R +P QV
Sbjct: 911 PLSYRLLPVQV 921



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 105/245 (42%), Gaps = 25/245 (10%)

Query: 227 AAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSP--------------HPIPCIE 272
           A  G HTLA+   G VW WG   +GQLG G+  R  S                H +   +
Sbjct: 79  AGNGNHTLAVRQDGTVWAWGNNDDGQLGDGTTTRRFSPVQVMTGATAIAAGIYHTVAASQ 138

Query: 273 S----SYGKDRSAALSRGSVNSEGPGFRVPG-NYVKGIACGGRHSAVITDAGALLTFGWG 327
                ++G++ S  L  G+        +V G   V  +A G  HSA +   G + T+G  
Sbjct: 139 DGTVWTWGRNSSGQLGDGTSIQRFSPVQVQGLTGVTAVAAGRNHSAALGQGGTVWTWGDN 198

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG 387
           L GQ G G++   L+P  V  L G  +  ++A    T+ +  DG V+A+G N  GQLG G
Sbjct: 199 LVGQLGDGTSTQRLTPVQVQGLTG--VIAISANDSETVALRQDGTVWAWGNNSSGQLGDG 256

Query: 388 GDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
                T  R      L      +++ G      +  DG ++ WG N  GQLG G      
Sbjct: 257 ----TTTVRFTPVQVLGLTGVTAIAAGGGFAVALRQDGTLWAWGSNSRGQLGNGTTFGSY 312

Query: 448 IPSQV 452
            P QV
Sbjct: 313 RPEQV 317



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 81/272 (29%), Positives = 119/272 (43%), Gaps = 30/272 (11%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR-----MVSSPHPIPCIESSY-- 275
           +  +AAG  +T+A    G VW WG    GQLG G+  R      V     +  I + Y  
Sbjct: 373 VTAIAAGYLYTVASKQDGTVWAWGDNEWGQLGDGTTTRRLTPVQVQGLTGVTAIAAGYLY 432

Query: 276 -------------GKDRSAALSRGSVNSEGPGFRVPG-NYVKGIACGGRHSAVITDAGAL 321
                        G ++ + L  G+V+       V G   +  IA     +  +   G +
Sbjct: 433 TVASKQDGTVWAWGDNKRSQLGEGAVSQRHTPGEVQGLEGITAIAASNLLTVAVRQDGTV 492

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             +G    GQ G G+T   L+P  V  L G+    VAA  +H + +  DG V+A+G   +
Sbjct: 493 WAWGDNARGQLGDGTTTRRLTPVQVQGLAGV--TAVAASDYHLVAVRQDGTVWAWGVGFW 550

Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
           GQLG G     + P  +    L  V   +++ G+ HT  +  DG V+ WG+N YGQLG G
Sbjct: 551 GQLGDGTGMDRSTP--VQVQGLTGV--TAIAAGSNHTVALRQDGTVWAWGFNNYGQLGDG 606

Query: 442 DVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
                  P QV  + G V   +A G  HT+ L
Sbjct: 607 TTAGHLTPVQVPGVTGAVA--IAAGGSHTVAL 636



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 104/390 (26%), Positives = 159/390 (40%), Gaps = 50/390 (12%)

Query: 91  PFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFER 150
           P  +   A +   AA   H VAV + G V+ WG          +G L  GTG+D+     
Sbjct: 514 PVQVQGLAGVTAVAASDYHLVAVRQDGTVWAWGVG-------FWGQLGDGTGMDRST--- 563

Query: 151 QSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSA 210
                  QV   + V+  + G++     R  G   +     +   Q  + +++G      
Sbjct: 564 -----PVQVQGLTGVTAIAAGSNHTVALRQDGTVWAWG--FNNYGQLGDGTTAGHLT--- 613

Query: 211 FPCLVTLNPGVRIAT-VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR--------- 260
            P  V   PGV  A  +AAGG HT+AL   G VW WGY   GQLG G+            
Sbjct: 614 -PVQV---PGVTGAVAIAAGGSHTVALLQDGTVWTWGYNIWGQLGDGTTTHRHSPVQVQG 669

Query: 261 -------MVSSPHPIPCIES----SYGKDRSAALSRGSVNSEGPGFRVPG-NYVKGIACG 308
                    ++ H +   +     ++G + S  L  G+        +V G      I   
Sbjct: 670 LADVIAIATNNGHTVAVRQDGTVWTWGLNSSGQLGDGTTTQRLTPVQVHGLTDATAILTS 729

Query: 309 GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICIS 368
              +  +     L  +G   +GQ G G+T   L+P  V  L+   +  +AAG +H     
Sbjct: 730 SSQTVAMRQDRTLWAWGDNHWGQLGDGTTTRRLTPVQVQGLM--DVTAMAAGGYHMAAAG 787

Query: 369 SDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVF 428
            DG ++ +G N +GQLG G      LP  +    L +  + +++ G  HT  +  DG V+
Sbjct: 788 QDGTLWTWGLNSYGQLGGGPLSYRLLP--VQVQGLTSATATAIAAGDSHTVAVRQDGTVW 845

Query: 429 CWGWNKYGQLGLGDVIDRNIPSQVTIEGCV 458
            WG N  GQLG G       P QV ++G +
Sbjct: 846 AWGSNFSGQLGDGTTAQSLTPVQVQVQGLM 875



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 115/426 (26%), Positives = 169/426 (39%), Gaps = 57/426 (13%)

Query: 49  VCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWA 108
           +  G     +A+     +  WG+ DD GQ  +  G       P  + T A+ +  AAG  
Sbjct: 77  LAAGNGNHTLAVRQDGTVWAWGNNDD-GQ--LGDGTTTRRFSPVQVMTGATAI--AAGIY 131

Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRS 168
           H VA ++ G V+TWG           G L  GT + +        F   QV   + V+  
Sbjct: 132 HTVAASQDGTVWTWGRNSS-------GQLGDGTSIQR--------FSPVQVQGLTGVTAV 176

Query: 169 SGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAA 228
           + G +       S   G      +           G       P  V    GV IA ++A
Sbjct: 177 AAGRNH------SAALGQGGTVWTWGDNLVGQLGDGTSTQRLTPVQVQGLTGV-IA-ISA 228

Query: 229 GGRHTLALSDIGQVWGWGYGGEGQLGLG-SRIRM----VSSPHPIPCIES---------- 273
               T+AL   G VW WG    GQLG G + +R     V     +  I +          
Sbjct: 229 NDSETVALRQDGTVWAWGNNSSGQLGDGTTTVRFTPVQVLGLTGVTAIAAGGGFAVALRQ 288

Query: 274 -----SYGKDRSAALSRGSVNSEGPGFRVPG-NYVKGIACGGRHSAVITDAGALLTFGWG 327
                ++G +    L  G+        +V G   V  IA  G H+  +   G L  +G  
Sbjct: 289 DGTLWAWGSNSRGQLGNGTTFGSYRPEQVQGLTGVTAIAASGIHTVALRQDGTLWAWGNN 348

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG 387
             GQ G G+T    +P  V  L G  +  +AAG  +T+    DG V+A+G N++GQLG G
Sbjct: 349 SSGQLGDGTTTVRFTPVQVQGLTG--VTAIAAGYLYTVASKQDGTVWAWGDNEWGQLGDG 406

Query: 388 GDQAETLPRLLDAPSLENVHS-KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR 446
                T  R L    ++ +    +++ G  +T     DG V+ WG NK  QLG G V  R
Sbjct: 407 -----TTTRRLTPVQVQGLTGVTAIAAGYLYTVASKQDGTVWAWGDNKRSQLGEGAVSQR 461

Query: 447 NIPSQV 452
           + P +V
Sbjct: 462 HTPGEV 467


>gi|332261829|ref|XP_003279969.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Nomascus leucogenys]
          Length = 704

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 143/298 (47%), Gaps = 45/298 (15%)

Query: 213 CLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR--------IRMVSS 264
           C+  L P  ++   A G  H L  ++ G V+  G   EGQLGLG          I   +S
Sbjct: 80  CVKALKPE-KVKLAACGRNHILVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTS 138

Query: 265 PHPIPCIESSYGKDRSAALSRGS------VNSEG-------PGFRVP-----GNYVKGIA 306
            H I  +  S G + SAA++          NSEG       P   VP     G  V  I+
Sbjct: 139 EHKIKQL--SAGSNTSAAVTEDGRLFMWGKNSEGQIGLKNVPNVCVPQQVTIGKPVSWIS 196

Query: 307 CGGRHSAVITDAGALLTFGWGLYGQCGQGST--DDELSPNCVSSLLGIQIEGVAAGLWHT 364
           CG  HSA +T  G L  FG    G+ G  S    +  +P  VS +    I+ VA G  HT
Sbjct: 197 CGYYHSAFVTTDGELYVFGEPENGKLGLPSQLLGNHRTPQLVSEIPEKVIQ-VARGGEHT 255

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAET-LPRLLDAPSLENVHSKSVS---CGARHTAV 420
           + ++ +  VY FG  QFGQLG G    ET  P+++     EN+  +++S   CG  HTA+
Sbjct: 256 VVLTENA-VYTFGLGQFGQLGLGTFLFETSEPKVI-----ENIRDQTISYISCGENHTAL 309

Query: 421 IADDGKVFCWGWNKYGQLGLG--DVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLAVP 475
           I D G ++ +G +++G+LGLG  +  +  IP+  +     + + VACG  H ++ A P
Sbjct: 310 IRDIGLMYTFGNSRHGKLGLGLENFTNHFIPTLCSDFLRFIVKLVACGGCHMVVFAAP 367



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 59/170 (34%), Positives = 92/170 (54%), Gaps = 2/170 (1%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           ++CG  HSAV+T    L  FG   +GQ G GS      P CV +L   +++  A G  H 
Sbjct: 40  LSCGDEHSAVVTRNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHI 99

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           +  +  G+VYA GGN  GQLG G  +      ++   + E+   K +S G+  +A + +D
Sbjct: 100 LVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEH-KIKQLSAGSNTSAAVTED 158

Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAV 474
           G++F WG N  GQ+GL +V +  +P QVTI   V   ++CG++H+  +  
Sbjct: 159 GRLFMWGKNSEGQIGLKNVPNVCVPQQVTIGKPVSW-ISCGYYHSAFVTT 207



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 136/328 (41%), Gaps = 62/328 (18%)

Query: 103 AAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPR 162
           AA G  H +  TEGG VY  G       G   G L  G   +++ F   S F +E     
Sbjct: 92  AACGRNHILVSTEGGNVYATG-------GNNEGQLGLGDTEERNTFHVISFFTSEH--KI 142

Query: 163 SQVSRSSGGTSSGT-DGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTL 217
            Q+S  S  +++ T DGR    G   EG    +I L                  P  VT+
Sbjct: 143 KQLSAGSNTSAAVTEDGRLFMWGKNSEG----QIGLKNVPN----------VCVPQQVTI 188

Query: 218 NPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
             G  ++ ++ G  H+  ++  G+++ +G    G+LGL S++                G 
Sbjct: 189 --GKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPSQL---------------LGN 231

Query: 278 DRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST 337
            R+  L             +P   ++ +A GG H+ V+T+  A+ TFG G +GQ G G+ 
Sbjct: 232 HRTPQLVS----------EIPEKVIQ-VARGGEHTVVLTE-NAVYTFGLGQFGQLGLGTF 279

Query: 338 DDELS-PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAET--L 394
             E S P  + ++    I  ++ G  HT  I   G +Y FG ++ G+LG G +      +
Sbjct: 280 LFETSEPKVIENIRDQTISYISCGENHTALIRDIGLMYTFGNSRHGKLGLGLENFTNHFI 339

Query: 395 PRLLDAPSLENVHSKSVSCGARHTAVIA 422
           P L           K V+CG  H  V A
Sbjct: 340 PTL--CSDFLRFIVKLVACGGCHMVVFA 365


>gi|297807279|ref|XP_002871523.1| ran GTPase binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297317360|gb|EFH47782.1| ran GTPase binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1075

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 94/169 (55%), Gaps = 2/169 (1%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ IACGG+H+ ++T  G   ++G    G+ G G   +   P  + +L    IE VA G 
Sbjct: 310 VQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACGE 369

Query: 362 WHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
           +H+  ++  GD+Y +G   FG LG G + +  +P+ ++   LE +H  S++CG  HTAV+
Sbjct: 370 FHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNF-LLEGIHVSSIACGPYHTAVV 428

Query: 422 ADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
              G++F +G   +G LG GD     IP +V +++G      ACG WHT
Sbjct: 429 TSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHT 477



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 83/282 (29%), Positives = 121/282 (42%), Gaps = 44/282 (15%)

Query: 205 DENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSS 264
           D N+   P L+       I  VA G  H+ A++  G ++ WG G  G LG G+ +     
Sbjct: 345 DSNIQQ-PKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEV----- 398

Query: 265 PHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTF 324
            H +P                  VN     F + G +V  IACG  H+AV+T AG L TF
Sbjct: 399 SHWVP----------------KRVN-----FLLEGIHVSSIACGPYHTAVVTSAGQLFTF 437

Query: 325 GWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI------------SSDGD 372
           G G +G  G G       P  V SL G++    A G+WHT  +             S G 
Sbjct: 438 GDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 497

Query: 373 VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGW 432
           ++ +G    G+LG G  + + +P  + A  L   +   V+CG   T  +   G V+  G 
Sbjct: 498 LFTWGDGDKGRLGHGNKEPKLVPTCVAA--LVEPNFCQVACGHSLTVALTTSGHVYTMGS 555

Query: 433 NKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLL 472
             YGQLG     D  +P++V   +       +ACG +H  +L
Sbjct: 556 PVYGQLGNSHA-DGKLPNRVEGKLHKSFVEEIACGAYHVAVL 596



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/271 (28%), Positives = 127/271 (46%), Gaps = 42/271 (15%)

Query: 217 LNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYG 276
           L  G+ ++++A G  HT  ++  GQ++ +G G  G LG G + + V  P  +  ++    
Sbjct: 409 LLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDK-KSVFIPREVDSLK---- 463

Query: 277 KDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDA------------GALLTF 324
                            G R     V+  ACG  H+A + +             G L T+
Sbjct: 464 -----------------GLRT----VRA-ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 501

Query: 325 GWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQL 384
           G G  G+ G G+ + +L P CV++L+      VA G   T+ +++ G VY  G   +GQL
Sbjct: 502 GDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQL 561

Query: 385 GTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVI 444
           G      + LP  ++   L     + ++CGA H AV+    +V+ WG    G+LG GDV 
Sbjct: 562 GNSHADGK-LPNRVEG-KLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVD 619

Query: 445 DRNIPSQV-TIEGCVPRNVACGWWHTLLLAV 474
           DRN P+ V +++    +++ACG   T  + +
Sbjct: 620 DRNSPTLVESLKDKQVKSIACGTNFTAAVCI 650



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 99/391 (25%), Positives = 159/391 (40%), Gaps = 68/391 (17%)

Query: 48  DVCGGGCG--FAMAISDSRKLITWGSTDD--LGQSYVTSGKHGEIPEPFPLPTEASIVKA 103
           DV    CG   A+ ++   +  +WG   +  LG    ++ +    P+        +I   
Sbjct: 309 DVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQ---PKLIDALNTTNIELV 365

Query: 104 AAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRS 163
           A G  H  AVT  G++YTWG  +       FG L  G  +   V +R  +FL E +    
Sbjct: 366 ACGEFHSCAVTLSGDLYTWGKGD-------FGVLGHGNEVSHWVPKR-VNFLLEGI---- 413

Query: 164 QVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRI 223
            VS  + G         +G+        +    T      GD+     P  V    G+R 
Sbjct: 414 HVSSIACGPYHTAVVTSAGQ------LFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRT 467

Query: 224 ATVAAGGRHTLALSDI------------GQVWGWGYGGEGQLGLGSRIRMVSSPHPIP-C 270
              A G  HT A+ ++            G+++ WG G +G+LG G++      P  +P C
Sbjct: 468 VRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNK-----EPKLVPTC 522

Query: 271 IESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
           +         AAL             V  N+ + +ACG   +  +T +G + T G  +YG
Sbjct: 523 V---------AAL-------------VEPNFCQ-VACGHSLTVALTTSGHVYTMGSPVYG 559

Query: 331 QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
           Q G    D +L       L    +E +A G +H   ++S  +VY +G    G+LG G   
Sbjct: 560 QLGNSHADGKLPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVD 619

Query: 391 AETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
               P L++  SL++   KS++CG   TA +
Sbjct: 620 DRNSPTLVE--SLKDKQVKSIACGTNFTAAV 648


>gi|14586365|emb|CAC42896.1| putative protein [Arabidopsis thaliana]
          Length = 1062

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 94/169 (55%), Gaps = 2/169 (1%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ IACGG+H+ ++T  G   ++G    G+ G G   +   P  + +L    IE VA G 
Sbjct: 297 VQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACGE 356

Query: 362 WHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
           +H+  ++  GD+Y +G   FG LG G + +  +P+ ++   LE +H  S++CG  HTAV+
Sbjct: 357 FHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNF-LLEGIHVSSIACGPYHTAVV 415

Query: 422 ADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
              G++F +G   +G LG GD     IP +V +++G      ACG WHT
Sbjct: 416 TSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHT 464



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 83/282 (29%), Positives = 120/282 (42%), Gaps = 44/282 (15%)

Query: 205 DENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSS 264
           D N+   P L+       I  VA G  H+ A++  G ++ WG G  G LG G+ +     
Sbjct: 332 DSNIQQ-PKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEV----- 385

Query: 265 PHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTF 324
            H +P                  VN     F + G +V  IACG  H+AV+T AG L TF
Sbjct: 386 SHWVP----------------KRVN-----FLLEGIHVSSIACGPYHTAVVTSAGQLFTF 424

Query: 325 GWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI------------SSDGD 372
           G G +G  G G       P  V SL G++    A G+WHT  +             S G 
Sbjct: 425 GDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 484

Query: 373 VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGW 432
           ++ +G    G+LG G  + + +P  + A  L   +   V+CG   T  +   G V+  G 
Sbjct: 485 LFTWGDGDKGRLGHGNKEPKLVPTCVAA--LVEPNFCQVACGHSLTVALTTSGHVYTMGS 542

Query: 433 NKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLL 472
             YGQLG     D   P++V   +       +ACG +H  +L
Sbjct: 543 PVYGQLGNSHA-DGKTPNRVEGKLHKSFVEEIACGAYHVAVL 583



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/271 (28%), Positives = 126/271 (46%), Gaps = 42/271 (15%)

Query: 217 LNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYG 276
           L  G+ ++++A G  HT  ++  GQ++ +G G  G LG G + + V  P  +  ++    
Sbjct: 396 LLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDK-KSVFIPREVDSLK---- 450

Query: 277 KDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDA------------GALLTF 324
                            G R     V+  ACG  H+A + +             G L T+
Sbjct: 451 -----------------GLRT----VRA-ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 488

Query: 325 GWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQL 384
           G G  G+ G G+ + +L P CV++L+      VA G   T+ +++ G VY  G   +GQL
Sbjct: 489 GDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQL 548

Query: 385 GTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVI 444
           G      +T  R+     L     + ++CGA H AV+    +V+ WG    G+LG GDV 
Sbjct: 549 GNSHADGKTPNRV--EGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVD 606

Query: 445 DRNIPSQV-TIEGCVPRNVACGWWHTLLLAV 474
           DRN P+ V +++    +++ACG   T  + +
Sbjct: 607 DRNSPTLVESLKDKQVKSIACGTNFTAAVCI 637



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 91/337 (27%), Positives = 142/337 (42%), Gaps = 63/337 (18%)

Query: 99  SIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQ 158
           +I   A G  H  AVT  G++YTWG  +       FG L  G  +   V +R  +FL E 
Sbjct: 348 NIELVACGEFHSCAVTLSGDLYTWGKGD-------FGVLGHGNEVSHWVPKR-VNFLLEG 399

Query: 159 VSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLN 218
           +     VS  + G         +G+        +    T      GD+     P  V   
Sbjct: 400 I----HVSSIACGPYHTAVVTSAGQ------LFTFGDGTFGVLGHGDKKSVFIPREVDSL 449

Query: 219 PGVRIATVAAGGRHTLALSDI------------GQVWGWGYGGEGQLGLGSRIRMVSSPH 266
            G+R    A G  HT A+ ++            G+++ WG G +G+LG G++      P 
Sbjct: 450 KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNK-----EPK 504

Query: 267 PIP-CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFG 325
            +P C+         AAL             V  N+ + +ACG   +  +T +G + T G
Sbjct: 505 LVPTCV---------AAL-------------VEPNFCQ-VACGHSLTVALTTSGHVYTMG 541

Query: 326 WGLYGQCGQGSTDDELSPNCVSSLLGIQ-IEGVAAGLWHTICISSDGDVYAFGGNQFGQL 384
             +YGQ G    D + +PN V   L    +E +A G +H   ++S  +VY +G    G+L
Sbjct: 542 SPVYGQLGNSHADGK-TPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRL 600

Query: 385 GTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
           G G       P L++  SL++   KS++CG   TA +
Sbjct: 601 GHGDVDDRNSPTLVE--SLKDKQVKSIACGTNFTAAV 635


>gi|195170687|ref|XP_002026143.1| GL16177 [Drosophila persimilis]
 gi|194111023|gb|EDW33066.1| GL16177 [Drosophila persimilis]
          Length = 1052

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 128/295 (43%), Gaps = 38/295 (12%)

Query: 211 FPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP- 269
            P  +   P   +  +A G RHTL L+  GQV+  G     QLG     +    P PIP 
Sbjct: 26  LPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACGNNDHHQLGHELPTK---RPLPIPE 82

Query: 270 -----CIESSYGKDRSAALSR-GSVNSEGPG---------------------FRVPGNYV 302
                 I+ + G   S AL+  G + S G                       F V    V
Sbjct: 83  LQAYVVIQIACGSRHSMALTEWGQILSWGDNDCGQVGHSTDNDVIELPKILRFLVSRTVV 142

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNC---VSSLLGIQIEGVAA 359
           + IACG  HS  +T  G L ++G  +YGQ G  S  D    N    ++++LGI +  +A 
Sbjct: 143 Q-IACGNNHSLALTSCGELYSWGSNIYGQLGVQSPKDLPHSNAPLRLTTILGIPLATIAC 201

Query: 360 GLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
           G  H+  IS    V+ +G N  GQLG   +Q    P  L   S+  +  + V+CG  ++ 
Sbjct: 202 GGNHSFLISKSSAVFGWGKNTCGQLGLNDEQNRAYPSQLK--SMRTLGVRFVTCGDEYSV 259

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLA 473
            + ++G VF  G   YGQLG G   +  IP  V  + G     VACG  HTL L 
Sbjct: 260 FLTNEGGVFTCGAGNYGQLGHGVSNNEMIPRMVIELMGSTITQVACGNRHTLALV 314



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 98/326 (30%), Positives = 145/326 (44%), Gaps = 59/326 (18%)

Query: 87  EIP--EPFPLPTEAS--IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTG 142
           E+P   P P+P   +  +++ A G  H +A+TE G++ +WG  +C   G+V      G  
Sbjct: 71  ELPTKRPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWGDNDC---GQV------GHS 121

Query: 143 LDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRI--SLAKQ 196
            D DV E            R  VSR+    + G +        GE  S    I   L  Q
Sbjct: 122 TDNDVIELPKIL-------RFLVSRTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVQ 174

Query: 197 TAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLG 256
                S  D   S  P  +T   G+ +AT+A GG H+  +S    V+GWG    GQLGL 
Sbjct: 175 -----SPKDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCGQLGLN 229

Query: 257 SRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVIT 316
                               ++R+      S+ + G         V+ + CG  +S  +T
Sbjct: 230 DE------------------QNRAYPSQLKSMRTLG---------VRFVTCGDEYSVFLT 262

Query: 317 DAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYA 375
           + G + T G G YGQ G G +++E+ P  V  L+G  I  VA G  HT+  + S G VY+
Sbjct: 263 NEGGVFTCGAGNYGQLGHGVSNNEMIPRMVIELMGSTITQVACGNRHTLALVPSGGRVYS 322

Query: 376 FGGNQFGQLGTGGDQAETLPRLLDAP 401
           FG    GQLGT    ++TLP+++  P
Sbjct: 323 FGLGASGQLGTRNTISQTLPKVVIGP 348



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 122/254 (48%), Gaps = 33/254 (12%)

Query: 203 SGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMV 262
           S D ++   P ++       +  +A G  H+LAL+  G+++ WG    GQLG       V
Sbjct: 121 STDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWGSNIYGQLG-------V 173

Query: 263 SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL 322
            SP  +P          S A  R +         + G  +  IACGG HS +I+ + A+ 
Sbjct: 174 QSPKDLP---------HSNAPLRLTT--------ILGIPLATIACGGNHSFLISKSSAV- 215

Query: 323 TFGWGLYGQCGQGSTDDELS---PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN 379
            FGWG    CGQ   +DE +   P+ + S+  + +  V  G  +++ ++++G V+  G  
Sbjct: 216 -FGWG-KNTCGQLGLNDEQNRAYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAG 273

Query: 380 QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQL 438
            +GQLG G    E +PR++    L       V+CG RHT A++   G+V+ +G    GQL
Sbjct: 274 NYGQLGHGVSNNEMIPRMV--IELMGSTITQVACGNRHTLALVPSGGRVYSFGLGASGQL 331

Query: 439 GLGDVIDRNIPSQV 452
           G  + I + +P  V
Sbjct: 332 GTRNTISQTLPKVV 345



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 10/158 (6%)

Query: 320 ALLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
           AL  +G   +GQ G G  ++E  L P+ +       ++ +A G  HT+ ++++G VYA G
Sbjct: 2   ALYCWGDASHGQLGLGGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACG 61

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQ 437
            N   QLG        LP     P L+      ++CG+RH+  + + G++  WG N  GQ
Sbjct: 62  NNDHHQLGHELPTKRPLP----IPELQAYVVIQIACGSRHSMALTEWGQILSWGDNDCGQ 117

Query: 438 LGL---GDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           +G     DVI+     +  +   V + +ACG  H+L L
Sbjct: 118 VGHSTDNDVIELPKILRFLVSRTVVQ-IACGNNHSLAL 154



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 79/328 (24%), Positives = 131/328 (39%), Gaps = 59/328 (17%)

Query: 24  LPQRSPILSPLVVRLPLTVGSAWRDVCGGGCG--FAMAISDSRKLITWGSTD--DLGQSY 79
           LP + P        LP+    A+  V    CG   +MA+++  ++++WG  D   +G S 
Sbjct: 72  LPTKRP--------LPIPELQAYV-VIQIACGSRHSMALTEWGQILSWGDNDCGQVGHS- 121

Query: 80  VTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLST 139
            T     E+P+        ++V+ A G  H +A+T  GE+Y+WG         ++G L  
Sbjct: 122 -TDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWG-------SNIYGQL-- 171

Query: 140 GTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAE 199
           G    KD+    +      +      + + GG  S    + S   G         K T  
Sbjct: 172 GVQSPKDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFG-------WGKNTCG 224

Query: 200 SSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
                DE   A+P  +     + +  V  G  +++ L++ G V+  G G  GQLG G   
Sbjct: 225 QLGLNDEQNRAYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQLGHG--- 281

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHS-AVITDA 318
             VS+   IP +                         + G+ +  +ACG RH+ A++   
Sbjct: 282 --VSNNEMIPRM----------------------VIELMGSTITQVACGNRHTLALVPSG 317

Query: 319 GALLTFGWGLYGQCGQGSTDDELSPNCV 346
           G + +FG G  GQ G  +T  +  P  V
Sbjct: 318 GRVYSFGLGASGQLGTRNTISQTLPKVV 345


>gi|145357939|ref|NP_568268.3| Regulator of chromosome condensation-like protein with FYVE zinc
           finger domain-containing protein [Arabidopsis thaliana]
 gi|332004415|gb|AED91798.1| Regulator of chromosome condensation-like protein with FYVE zinc
           finger domain-containing protein [Arabidopsis thaliana]
          Length = 1075

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 94/169 (55%), Gaps = 2/169 (1%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ IACGG+H+ ++T  G   ++G    G+ G G   +   P  + +L    IE VA G 
Sbjct: 310 VQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACGE 369

Query: 362 WHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
           +H+  ++  GD+Y +G   FG LG G + +  +P+ ++   LE +H  S++CG  HTAV+
Sbjct: 370 FHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNF-LLEGIHVSSIACGPYHTAVV 428

Query: 422 ADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
              G++F +G   +G LG GD     IP +V +++G      ACG WHT
Sbjct: 429 TSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHT 477



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 83/282 (29%), Positives = 120/282 (42%), Gaps = 44/282 (15%)

Query: 205 DENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSS 264
           D N+   P L+       I  VA G  H+ A++  G ++ WG G  G LG G+ +     
Sbjct: 345 DSNIQQ-PKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEV----- 398

Query: 265 PHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTF 324
            H +P                  VN     F + G +V  IACG  H+AV+T AG L TF
Sbjct: 399 SHWVP----------------KRVN-----FLLEGIHVSSIACGPYHTAVVTSAGQLFTF 437

Query: 325 GWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI------------SSDGD 372
           G G +G  G G       P  V SL G++    A G+WHT  +             S G 
Sbjct: 438 GDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 497

Query: 373 VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGW 432
           ++ +G    G+LG G  + + +P  + A  L   +   V+CG   T  +   G V+  G 
Sbjct: 498 LFTWGDGDKGRLGHGNKEPKLVPTCVAA--LVEPNFCQVACGHSLTVALTTSGHVYTMGS 555

Query: 433 NKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLL 472
             YGQLG     D   P++V   +       +ACG +H  +L
Sbjct: 556 PVYGQLGNSHA-DGKTPNRVEGKLHKSFVEEIACGAYHVAVL 596



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/271 (28%), Positives = 126/271 (46%), Gaps = 42/271 (15%)

Query: 217 LNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYG 276
           L  G+ ++++A G  HT  ++  GQ++ +G G  G LG G + + V  P  +  ++    
Sbjct: 409 LLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDK-KSVFIPREVDSLK---- 463

Query: 277 KDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDA------------GALLTF 324
                            G R     V+  ACG  H+A + +             G L T+
Sbjct: 464 -----------------GLRT----VRA-ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 501

Query: 325 GWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQL 384
           G G  G+ G G+ + +L P CV++L+      VA G   T+ +++ G VY  G   +GQL
Sbjct: 502 GDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQL 561

Query: 385 GTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVI 444
           G      +T  R+     L     + ++CGA H AV+    +V+ WG    G+LG GDV 
Sbjct: 562 GNSHADGKTPNRV--EGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVD 619

Query: 445 DRNIPSQV-TIEGCVPRNVACGWWHTLLLAV 474
           DRN P+ V +++    +++ACG   T  + +
Sbjct: 620 DRNSPTLVESLKDKQVKSIACGTNFTAAVCI 650



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 101/392 (25%), Positives = 162/392 (41%), Gaps = 70/392 (17%)

Query: 48  DVCGGGCG--FAMAISDSRKLITWGSTDD--LGQSYVTSGKHGEIPEPFPLPTEASIVKA 103
           DV    CG   A+ ++   +  +WG   +  LG    ++ +    P+        +I   
Sbjct: 309 DVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQ---PKLIDALNTTNIELV 365

Query: 104 AAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRS 163
           A G  H  AVT  G++YTWG  +       FG L  G  +   V +R  +FL E +    
Sbjct: 366 ACGEFHSCAVTLSGDLYTWGKGD-------FGVLGHGNEVSHWVPKR-VNFLLEGI---- 413

Query: 164 QVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRI 223
            VS  + G         +G+        +    T      GD+     P  V    G+R 
Sbjct: 414 HVSSIACGPYHTAVVTSAGQ------LFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRT 467

Query: 224 ATVAAGGRHTLALSDI------------GQVWGWGYGGEGQLGLGSRIRMVSSPHPIP-C 270
              A G  HT A+ ++            G+++ WG G +G+LG G++      P  +P C
Sbjct: 468 VRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNK-----EPKLVPTC 522

Query: 271 IESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
           +         AAL             V  N+ + +ACG   +  +T +G + T G  +YG
Sbjct: 523 V---------AAL-------------VEPNFCQ-VACGHSLTVALTTSGHVYTMGSPVYG 559

Query: 331 QCGQGSTDDELSPNCVSSLLGIQ-IEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD 389
           Q G    D + +PN V   L    +E +A G +H   ++S  +VY +G    G+LG G  
Sbjct: 560 QLGNSHADGK-TPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDV 618

Query: 390 QAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
                P L++  SL++   KS++CG   TA +
Sbjct: 619 DDRNSPTLVE--SLKDKQVKSIACGTNFTAAV 648


>gi|126272574|ref|XP_001362426.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Monodelphis domestica]
          Length = 1057

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 85/261 (32%), Positives = 119/261 (45%), Gaps = 34/261 (13%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP------CIESSY 275
            I  V+ G  HTLAL+D GQV+ WG   +GQLGL      +  P  I        ++ + 
Sbjct: 85  NIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIKVPRNIKSLTDIQIVQIAC 144

Query: 276 GKDRSAALSRGS------VNSEGP---GFRVPGN----YVKG--------IACGGRHSAV 314
           G   S ALS+GS       N  G    GF +        +K         +A GG HS V
Sbjct: 145 GYYHSLALSKGSEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGGAHSFV 204

Query: 315 ITDAGALLTFGWGL--YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGD 372
           +T +GA+  FGWG   +GQ G    +D   PN + SL   +I  +  G  HT  ++ +G 
Sbjct: 205 LTLSGAI--FGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGG 262

Query: 373 VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           V+ FG   +GQLG      E  PR      L       ++CG +HT A +   G+++ +G
Sbjct: 263 VFTFGAGGYGQLGHNSTSHEINPR--KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFG 320

Query: 432 WNKYGQLGLGDVIDRNIPSQV 452
               GQLG G   +R  P  V
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTV 341



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 83/277 (29%), Positives = 127/277 (45%), Gaps = 34/277 (12%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES------SY 275
           ++  V  G RHT+ + D G V+  G    GQLG     +    P  +  +++      S 
Sbjct: 35  KVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---HEKSRKKPEQVVALDAQNIVAVSC 91

Query: 276 GKDRSAALS-RGSVNSEG---------PG----FRVPGNY-------VKGIACGGRHSAV 314
           G+  + AL+ +G V + G         PG     +VP N        +  IACG  HS  
Sbjct: 92  GEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLA 151

Query: 315 ITDAGALLTFGWGLYGQCGQG-STDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDV 373
           ++    + ++G   +GQ G G     + +P  + SLLGI    VAAG  H+  ++  G +
Sbjct: 152 LSKGSEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI 211

Query: 374 YAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWN 433
           + +G N+FGQLG   +    +P LL   SL +     + CG  HTA +  +G VF +G  
Sbjct: 212 FGWGRNKFGQLGLNDENDRFVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAG 269

Query: 434 KYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            YGQLG         P +V  + G +   +ACG  HT
Sbjct: 270 GYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/176 (31%), Positives = 93/176 (52%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  VQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLGT-GGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    ++CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIKVPR--NIKSLTDIQIVQIACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLG-DVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VF WG NK+GQLGLG ++  ++ P  + ++ G     VA G  H+ +L +
Sbjct: 152 LSKGSEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/160 (34%), Positives = 83/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      +  +++ V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDTDGQL 116

Query: 439 GLGDV-----IDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      +ACG++H+L L+
Sbjct: 117 GLPGTEEYIKVPRNIKSLTDIQIV---QIACGYYHSLALS 153



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 80/309 (25%), Positives = 126/309 (40%), Gaps = 58/309 (18%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D       + ++ ++P      T+  IV+ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIKVPRNIKSLTDIQIVQIA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS---- 160
            G+ H +A+++G EV++WG  +        G L  G       FE +S    + +     
Sbjct: 144 CGYYHSLALSKGSEVFSWGQNK-------HGQLGLG-------FELKSQSAPQLIKSLLG 189

Query: 161 -PRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
            P  QV  ++GG  S          G  R +              DEN    P L+    
Sbjct: 190 IPFMQV--AAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRFVPNLLKSLR 240

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
             +I  +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +           
Sbjct: 241 SQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV----------- 288

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTD 338
                          F + G+ V  IACG +H SA +  +G + +FG G  GQ G GST 
Sbjct: 289 ---------------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTS 333

Query: 339 DELSPNCVS 347
           +  SP  V 
Sbjct: 334 NRKSPFTVK 342



 Score = 41.6 bits (96), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 54/244 (22%), Positives = 98/244 (40%), Gaps = 59/244 (24%)

Query: 36  VRLPLTVGSAWR-DVCGGGCGF--AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPF 92
           +++P  + S     +    CG+  ++A+S   ++ +WG             KHG++   F
Sbjct: 125 IKVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQ-----------NKHGQLGLGF 173

Query: 93  PLPTEAS-----------IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGT 141
            L ++++            ++ AAG AH   +T  G ++ WG  +       FG L    
Sbjct: 174 ELKSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNK-------FGQLGLND 226

Query: 142 GLDKDVFERQSSFLTEQV-------SPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLA 194
             D+ V     S  ++++          + +++  G  + G  G G              
Sbjct: 227 ENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYG-------------- 272

Query: 195 KQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLAL-SDIGQVWGWGYGGEGQL 253
            Q   +S+S + N    P  V    G  +  +A G +HT A     G+++ +G GG GQL
Sbjct: 273 -QLGHNSTSHEIN----PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQL 327

Query: 254 GLGS 257
           G GS
Sbjct: 328 GTGS 331


>gi|432118039|gb|ELK37976.1| E3 ubiquitin-protein ligase HERC2 [Myotis davidii]
          Length = 4285

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 128/255 (50%), Gaps = 29/255 (11%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           V+IA   + G H LAL+  G+V+ WG G  G+LG G  +     P   P + S++   ++
Sbjct: 497 VKIAA-HSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 550

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                             G +V  IACG  +SA IT  G L T+G G YG+ G GS++DE
Sbjct: 551 ------------------GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 592

Query: 341 LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
             P  V+ L G+++  VA  +G    + ++ +G V+++G   +G+LG GG      P+L+
Sbjct: 593 AIPMLVAGLKGLKVIDVACGSGDAQPLAVTDNGQVWSWGDGDYGKLGRGGSDGCKTPKLI 652

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGC 457
           +   L+++    V CG++ +  +  DG+V+ WG     +LG G       P  +  ++G 
Sbjct: 653 E--KLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEALQGK 710

Query: 458 VPRNVACGWWHTLLL 472
              +VA G  H L L
Sbjct: 711 KVIDVAAGSTHCLAL 725



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 86/313 (27%), Positives = 131/313 (41%), Gaps = 85/313 (27%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GGRH  AL+  G+V+ WG G +G+LG  SR+     P  I  +++   +D  
Sbjct: 2751 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRD-- 2807

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                    IACG  HSA +T +G L T+G G YG+ G G    +
Sbjct: 2808 ------------------------IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ 2843

Query: 341  LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V  LLG ++  VA G     T+ ++ +G V+++G   FG+LG GG +   +P+ +
Sbjct: 2844 LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNI 2903

Query: 399  DAPSLE------------------------------------NVHSKS------------ 410
            +  + +                                    +VH +             
Sbjct: 2904 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI 2963

Query: 411  --VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACG-- 465
              V+ GA H   + D G+V+ WG N +GQ G G       P+ V  +EG     VACG  
Sbjct: 2964 VHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3023

Query: 466  ---WWHTLLLAVP 475
                W T+ +A P
Sbjct: 3024 HSVAWTTVDMATP 3036



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 80/282 (28%), Positives = 126/282 (44%), Gaps = 33/282 (11%)

Query: 220  GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES------ 273
             + +  VA G +   A++  G+V+  G    G+LGLG     V  P  +  + S      
Sbjct: 2695 ALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGMSSGTVPIPRQVTALSSYVVKKV 2754

Query: 274  ---SYGKDRSAALSRGSVNSEGPG-------------------FRVPGNYVKGIACGGRH 311
               S G+  +A    G V S G G                     +    ++ IACG  H
Sbjct: 2755 AVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSH 2814

Query: 312  SAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW--HTICISS 369
            SA +T +G L T+G G YG+ G G    +L P  V  LLG ++  VA G     T+ ++ 
Sbjct: 2815 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 2874

Query: 370  DGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFC 429
            +G V+++G   FG+LG GG +   +P+ ++  + + V    + CGA+ +  +   G V+ 
Sbjct: 2875 EGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVC--QIECGAQFSLALTKSGVVWT 2932

Query: 430  WGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
            WG   Y +LG G  +    P  V  + G    +VA G  H L
Sbjct: 2933 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCL 2974



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 102/354 (28%), Positives = 150/354 (42%), Gaps = 59/354 (16%)

Query: 99   SIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQ 158
            ++V+ A G     AVT  G+VY  G      +GR+   +S+GT        RQ + L+  
Sbjct: 2697 NVVQVAGGSKSLFAVTVEGKVYACGE---ATNGRLGLGMSSGTV----PIPRQVTALSSY 2749

Query: 159  VSPRSQVSRSSGG---TSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAF 211
            V    +V+  SGG   T+   DG+    G G++G         K    S  + D+     
Sbjct: 2750 VV--KKVAVHSGGRHATALTVDGKVFSWGEGDDG---------KLGHFSRMNCDK----- 2793

Query: 212  PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS-----RIRMVSSPH 266
            P L+      RI  +A G  H+ AL+  G+++ WG G  G+LG G      + +MV    
Sbjct: 2794 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL 2853

Query: 267  PIPCIESSYGKDRSAALS---RGSVNSEGPG-------------------FRVPGNYVKG 304
                I+ + G   +  L+    G V S G G                    R+ G  V  
Sbjct: 2854 GHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQ 2913

Query: 305  IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
            I CG + S  +T +G + T+G G Y + G GS      P  V  L G +I  VA G  H 
Sbjct: 2914 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHC 2973

Query: 365  ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
            + ++  G VYA+G N  GQ G G       P L+    LE      V+CG+ H+
Sbjct: 2974 LAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHS 3025



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 118/258 (45%), Gaps = 45/258 (17%)

Query: 233  TLALSDIGQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAALSRG---- 286
            TL+    G ++GWG+   GQLG   G+++++     P PC   +    R   L  G    
Sbjct: 3624 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKV-----PTPC--EALATLRPVQLIGGEQTL 3676

Query: 287  -SVNSEGPGF-------------------------RVPGNYVKGIAC--GGRHSAVITDA 318
             +V ++G  +                          +   +++ +A   GG+H   ++  
Sbjct: 3677 FAVTADGKLYATGYGAGGRLGVGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSE 3736

Query: 319  GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            G + ++G    G+ G G+      P  V SL G ++  +AAG  H+ C++S GD+Y +G 
Sbjct: 3737 GEVYSWGEAEDGKLGHGNRSPCDRPRVVESLRGTEVVDIAAGGAHSACVTSAGDLYTWGK 3796

Query: 379  NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGA--RHTAVIADDGKVFCWGWNKYG 436
             ++G+LG    + +  P+L++A  L+      V+CG+    T  + DD  V+ WG   YG
Sbjct: 3797 GRYGRLGHSDSEDQLKPKLVEA--LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYG 3854

Query: 437  QLGLGDVIDRNIPSQVTI 454
            +LG G      +P +V +
Sbjct: 3855 KLGRGGSDGCKVPMKVPL 3872



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 99/358 (27%), Positives = 135/358 (37%), Gaps = 76/358 (21%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V   +G  HC+A++  GEVY+WG  E         D   G G ++   +R    + E + 
Sbjct: 3721 VAVNSGGKHCLALSSEGEVYSWGEAE---------DGKLGHG-NRSPCDRPR--VVESLR 3768

Query: 161  PRSQVSRSSGGTSSG-TDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
                V  ++GG  S      G      K R   L    +E            P LV    
Sbjct: 3769 GTEVVDIAAGGAHSACVTSAGDLYTWGKGRYGRLGHSDSEDQLK--------PKLVEALQ 3820

Query: 220  GVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
            G R+  VA  +G   TL L+D   VW WG G  G+LG G                   G 
Sbjct: 3821 GHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-------------------GS 3861

Query: 278  DRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST 337
            D               G +VP      +  G R S        L   G G Y + G GS 
Sbjct: 3862 D---------------GCKVPMKVPLSLRVG-RPSTPPPSWPRLDVGGKGDYHRLGHGSD 3905

Query: 338  DDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
            D    P  V  L G ++  +A G  H +C + +G+VY +G N  GQLG G   A   PRL
Sbjct: 3906 DHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEEGEVYTWGDNDEGQLGDGTTNAIQRPRL 3965

Query: 398  LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
            + A  L+      V+CG+ HT           W  +K    G        +P+QV +E
Sbjct: 3966 VAA--LQGRKVNRVACGSAHT---------LAWSTSKPASAG-------KLPAQVPME 4005



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 95/217 (43%), Gaps = 38/217 (17%)

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
           SS DE   A P LV    G+++  VA  +G    LA++D GQVW WG G  G+LG G   
Sbjct: 588 SSEDE---AIPMLVAGLKGLKVIDVACGSGDAQPLAVTDNGQVWSWGDGDYGKLGRG--- 641

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITD 317
                                     GS   + P    ++    V  + CG + S  +T 
Sbjct: 642 --------------------------GSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTK 675

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
            G + ++G G   + G G+ +    P  + +L G ++  VAAG  H + ++ D +V+++G
Sbjct: 676 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEALQGKKVIDVAAGSTHCLALTEDSEVHSWG 735

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
            N   Q      Q +  P LL  P L+  H   ++CG
Sbjct: 736 NNDQCQHFDTLHQTKPEPSLL--PGLDTKHIVGIACG 770



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 83/310 (26%), Positives = 121/310 (39%), Gaps = 47/310 (15%)

Query: 57   AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEG 116
            A A++   K+ +WG  DD G+    S  + + P          I   A G +H  A+T  
Sbjct: 2763 ATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 2821

Query: 117  GEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGT 176
            GE+YTWG  E    GR  G     T L   + +        QV+  S+ +++   T  G 
Sbjct: 2822 GELYTWGLGE---YGR-LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 2877

Query: 177  DGR-GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLA 235
                G G+ G   R              G E  +    +  LN G  +  +  G + +LA
Sbjct: 2878 VFSWGDGDFGKLGR-------------GGSEGCNVPQNIERLN-GQGVCQIECGAQFSLA 2923

Query: 236  LSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF 295
            L+  G VW WG G   +LG GS +  V  P  +                         G 
Sbjct: 2924 LTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQVVE------------------------GL 2958

Query: 296  RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
            R  G  +  +A G  H   +TDAG +  +G   +GQ G G+T     P  V  L G +I 
Sbjct: 2959 R--GKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKIT 3016

Query: 356  GVAAGLWHTI 365
             VA G  H++
Sbjct: 3017 RVACGSSHSV 3026



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 62/132 (46%), Gaps = 2/132 (1%)

Query: 343  PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAET-LPRLLDAP 401
            P+   +L  + +  VA G      ++ +G VYA G    G+LG G       +PR + A 
Sbjct: 2687 PSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGMSSGTVPIPRQVTAL 2746

Query: 402  SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
            S   V   +V  G RH   +  DGKVF WG    G+LG    ++ + P  +  ++    R
Sbjct: 2747 SSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIR 2806

Query: 461  NVACGWWHTLLL 472
            ++ACG  H+  L
Sbjct: 2807 DIACGSSHSAAL 2818



 Score = 43.1 bits (100), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 3/78 (3%)

Query: 48  DVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAA 105
           DV    CG  F++A++   ++ +WG  D+    + T  +H   P+         ++  AA
Sbjct: 659 DVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEALQGKKVIDVAA 717

Query: 106 GWAHCVAVTEGGEVYTWG 123
           G  HC+A+TE  EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735


>gi|348579534|ref|XP_003475534.1| PREDICTED: RCC1 domain-containing protein 1-like [Cavia porcellus]
          Length = 373

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/228 (32%), Positives = 110/228 (48%), Gaps = 50/228 (21%)

Query: 293 PGFR---VPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSL 349
           P FR    P    + +  G  H+ ++  AG + ++G G +GQ G G+ + EL P  + +L
Sbjct: 145 PPFRHCLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEMELEPRLLEAL 204

Query: 350 LGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLG-------------TG--------G 388
            G+ +  VAAG WH++C+S   D+Y +G N+ GQL              TG        G
Sbjct: 205 QGLPMAQVAAGGWHSVCVSETRDLYVWGWNESGQLALPARSLAEDKRTVTGEGKGLNQEG 264

Query: 389 DQAET-----------------LPRLLDAPSLENVHSKSV--SCGARHTAVIADDGKVFC 429
            + ET                  P LLD P    + S++V  SCG+RHTAV+   G+++ 
Sbjct: 265 SEVETVAGTEDGAPAPFIAVQPFPALLDLP----LGSEAVGASCGSRHTAVVTRTGELYT 320

Query: 430 WGWNKYGQLGLGDVIDRNIPSQVTI---EGCVPRNVACGWWHTLLLAV 474
           WGW KYGQLG  D    + P +V     +    + V CG W+T + AV
Sbjct: 321 WGWGKYGQLGHQDSASLDRPCRVEYFVHKQLQVKTVTCGPWNTYVYAV 368



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 85/358 (23%), Positives = 135/358 (37%), Gaps = 82/358 (22%)

Query: 83  GKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTG 142
           G+  ++  P PL T   I   +A W++   VT GG         CV    + G +S   G
Sbjct: 24  GRRCQVLSPEPLKTRRDICHVSASWSYTALVTRGG---------CV---ELSGSVSGTAG 71

Query: 143 LDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQ----TA 198
             +DV+  +   +  +  P S+V   +    S   G     +  + +  +L+ +    T 
Sbjct: 72  GCRDVWASERLLVLLRDGPGSRVELQAWAPGSVLHGEPLWAQDPEAKGAALSAEAPVGTL 131

Query: 199 ESSSSGDENLSAFPCLV-TLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS 257
               S    +S +P     L P +R   +  G  H L L   GQV+ WG G  GQLG G+
Sbjct: 132 PLLPSSHVYVSPWPPFRHCLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGT 191

Query: 258 -----RIRMVSSPHPIPCIESSYG----------KD----------------RSAALSRG 286
                  R++ +   +P  + + G          +D                RS A  + 
Sbjct: 192 LEMELEPRLLEALQGLPMAQVAAGGWHSVCVSETRDLYVWGWNESGQLALPARSLAEDKR 251

Query: 287 SVNSEGPGFRVPGNYVKGIA--------------------------------CGGRHSAV 314
           +V  EG G    G+ V+ +A                                CG RH+AV
Sbjct: 252 TVTGEGKGLNQEGSEVETVAGTEDGAPAPFIAVQPFPALLDLPLGSEAVGASCGSRHTAV 311

Query: 315 ITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG--IQIEGVAAGLWHTICISSD 370
           +T  G L T+GWG YGQ G   +     P  V   +   +Q++ V  G W+T   + +
Sbjct: 312 VTRTGELYTWGWGKYGQLGHQDSASLDRPCRVEYFVHKQLQVKTVTCGPWNTYVYAVE 369


>gi|384251643|gb|EIE25120.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
          Length = 567

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/281 (28%), Positives = 126/281 (44%), Gaps = 58/281 (20%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           PC+    PG+R+  VAAGG H+  L+D G+VW WG                      P  
Sbjct: 187 PCV----PGLRVKQVAAGGMHSCVLTDTGEVWTWGE---------------------PWG 221

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
           + S   DR      G+++            +  +ACG  H+  +  AG +L +G   +GQ
Sbjct: 222 DFSMKVDRHPKKVEGAID------------IVKLACGAFHNLALNAAGEVLAWGINDFGQ 269

Query: 332 CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGD-------------VYAFGG 378
            G GST  E SP  V  L  +++  + AG WH++ ++++G              V+ +G 
Sbjct: 270 LGNGSTFYETSPTKVLGLEDVRVADIVAGGWHSLALTTEGGAHPQIECAKAGKMVFVWGR 329

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
            ++G+LG G     +  R       E       SCG  HT V+  +G+++ WG   +G+L
Sbjct: 330 GEYGRLGLGDRSGSSKLRATGVAFKE----PDASCGGTHTMVLTSEGRIYTWGRGSFGRL 385

Query: 439 GLGDVIDRNIPSQVTIEGCVPR-NVAC---GWWHTLLLAVP 475
           G G   D   P +V + G   R  V C   G  H+L+LA+P
Sbjct: 386 GTGTEKDYLSPVEVFLPGGPERWRVICCASGGRHSLVLALP 426



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 87/288 (30%), Positives = 124/288 (43%), Gaps = 54/288 (18%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR-----IRMVSSPHPIPCIESSYGKDRS 280
           +  G R T+A+   GQV  WG+     LG   R      R V++   +   + S G    
Sbjct: 94  LVCGSRCTVAIDADGQVLSWGWNDRATLGHSHREHERKPRRVAALRGMEITQVSTGGWHC 153

Query: 281 AALSR------------GSVNSE-------GPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
            AL              G  N E        P   VPG  VK +A GG HS V+TD G +
Sbjct: 154 LALDSAGLVYAWGGNEYGQCNVEWNVRDVVQPTPCVPGLRVKQVAAGGMHSCVLTDTGEV 213

Query: 322 LTFG--WGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN 379
            T+G  WG +      S   +  P  V     I I  +A G +H + +++ G+V A+G N
Sbjct: 214 WTWGEPWGDF------SMKVDRHPKKVEG--AIDIVKLACGAFHNLALNAAGEVLAWGIN 265

Query: 380 QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDG-------------K 426
            FGQLG G    ET P       LE+V    +  G  H+  +  +G              
Sbjct: 266 DFGQLGNGSTFYETSP--TKVLGLEDVRVADIVAGGWHSLALTTEGGAHPQIECAKAGKM 323

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPR--NVACGWWHTLLL 472
           VF WG  +YG+LGLG   DR+  S++   G   +  + +CG  HT++L
Sbjct: 324 VFVWGRGEYGRLGLG---DRSGSSKLRATGVAFKEPDASCGGTHTMVL 368



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 109/233 (46%), Gaps = 32/233 (13%)

Query: 242 VWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNY 301
           V+GWG   +GQL L      V +P  +  +  +  + R                    ++
Sbjct: 51  VFGWGVNEDGQLAL-DEAENVMAPKVLEALLGTRFQGR--------------------DF 89

Query: 302 VKG-IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAG 360
           +K  + CG R +  I   G +L++GW      G    + E  P  V++L G++I  V+ G
Sbjct: 90  LKSPLVCGSRCTVAIDADGQVLSWGWNDRATLGHSHREHERKPRRVAALRGMEITQVSTG 149

Query: 361 LWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            WH + + S G VYA+GGN++GQ     +  + +      P +  +  K V+ G  H+ V
Sbjct: 150 GWHCLALDSAGLVYAWGGNEYGQCNVEWNVRDVVQ---PTPCVPGLRVKQVAAGGMHSCV 206

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVP-RNVACGWWHTLLL 472
           + D G+V+ WG   +G   +   +DR+ P +V  EG +    +ACG +H L L
Sbjct: 207 LTDTGEVWTWG-EPWGDFSMK--VDRH-PKKV--EGAIDIVKLACGAFHNLAL 253



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 112/436 (25%), Positives = 172/436 (39%), Gaps = 73/436 (16%)

Query: 6   QEEKMERVVFMWGYLPG---ALPQRSPILSPLVVRLPLTVGSAWRD------VCGGGCGF 56
           Q+  +E VVF WG       AL +   +++P V+   L      RD      VCG  C  
Sbjct: 43  QKPPIEAVVFGWGVNEDGQLALDEAENVMAPKVLEALLGTRFQGRDFLKSPLVCGSRC-- 100

Query: 57  AMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVT 114
            +AI    ++++WG  D   LG S+    +H   P          I + + G  HC+A+ 
Sbjct: 101 TVAIDADGQVLSWGWNDRATLGHSHR---EHERKPRRVAALRGMEITQVSTGGWHCLALD 157

Query: 115 EGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSS 174
             G VY WG       G  +G  +    + +DV +        +V    QV  ++GG  S
Sbjct: 158 SAGLVYAWG-------GNEYGQCNVEWNV-RDVVQPTPCVPGLRV---KQV--AAGGMHS 204

Query: 175 GTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP-----GVRIATVAAG 229
                             +   T E  + G E    F   V  +P      + I  +A G
Sbjct: 205 -----------------CVLTDTGEVWTWG-EPWGDFSMKVDRHPKKVEGAIDIVKLACG 246

Query: 230 GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVN 289
             H LAL+  G+V  WG    GQLG GS     +SP  +  +E      R A +  G  +
Sbjct: 247 AFHNLALNAAGEVLAWGINDFGQLGNGSTF-YETSPTKVLGLEDV----RVADIVAGGWH 301

Query: 290 SEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTDDELSPNCVS 347
           S           +     GG H  +       + F WG   YG+ G G  D   S    +
Sbjct: 302 S-----------LALTTEGGAHPQIECAKAGKMVFVWGRGEYGRLGLG--DRSGSSKLRA 348

Query: 348 SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP-SLENV 406
           + +  +    + G  HT+ ++S+G +Y +G   FG+LGTG ++    P  +  P   E  
Sbjct: 349 TGVAFKEPDASCGGTHTMVLTSEGRIYTWGRGSFGRLGTGTEKDYLSPVEVFLPGGPERW 408

Query: 407 HSKSVSCGARHTAVIA 422
                + G RH+ V+A
Sbjct: 409 RVICCASGGRHSLVLA 424


>gi|186524238|ref|NP_197443.3| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|332005320|gb|AED92703.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1105

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 58/169 (34%), Positives = 94/169 (55%), Gaps = 2/169 (1%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ IACGG+H+ ++T  G   ++G    G+ G G   +   P  + +L    IE VA G 
Sbjct: 314 VQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALNTTNIELVACGE 373

Query: 362 WHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
           +H+  ++  GD+Y +G   FG LG G + +  +P+ ++   +E +H  S++CG  HTAV+
Sbjct: 374 YHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNF-LMEGIHVSSIACGPYHTAVV 432

Query: 422 ADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
              G++F +G   +G LG GD     IP +V +++G      ACG WHT
Sbjct: 433 TSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHT 481



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 120/282 (42%), Gaps = 44/282 (15%)

Query: 205 DENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSS 264
           D N+   P L+       I  VA G  H+ A++  G ++ WG G  G LG G+ +     
Sbjct: 349 DSNVQ-HPKLIDALNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEV----- 402

Query: 265 PHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTF 324
            H +P                  VN     F + G +V  IACG  H+AV+T AG L TF
Sbjct: 403 SHWVP----------------KRVN-----FLMEGIHVSSIACGPYHTAVVTSAGQLFTF 441

Query: 325 GWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI------------SSDGD 372
           G G +G  G G       P  V SL G++    A G+WHT  +             S G 
Sbjct: 442 GDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 501

Query: 373 VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGW 432
           ++ +G     +LG G  + + +P  + A  L   +   V+CG   T  +   G V+  G 
Sbjct: 502 LFTWGDGDKSRLGHGDKEPKLVPTCVAA--LVEPNFCQVACGHSLTVALTTSGHVYTMGS 559

Query: 433 NKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLL 472
             YGQLG     D  +P++V   +       +ACG +H  +L
Sbjct: 560 PVYGQLG-NPHADGKVPTRVDGKLHKSFVEEIACGAYHVAVL 600



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/262 (28%), Positives = 121/262 (46%), Gaps = 42/262 (16%)

Query: 217 LNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYG 276
           L  G+ ++++A G  HT  ++  GQ++ +G G  G LG G R + V  P  +  ++    
Sbjct: 413 LMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDR-KSVFIPREVDSLK---- 467

Query: 277 KDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDA------------GALLTF 324
                            G R     V+  ACG  H+A + +             G L T+
Sbjct: 468 -----------------GLRT----VRA-ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 505

Query: 325 GWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQL 384
           G G   + G G  + +L P CV++L+      VA G   T+ +++ G VY  G   +GQL
Sbjct: 506 GDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQL 565

Query: 385 GTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVI 444
           G      + +P  +D   L     + ++CGA H AV+    +V+ WG    G+LG GD  
Sbjct: 566 GNPHADGK-VPTRVDG-KLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDAD 623

Query: 445 DRNIPSQV-TIEGCVPRNVACG 465
           DRN P+ V +++    +++ACG
Sbjct: 624 DRNSPTLVESLKDKQVKSIACG 645



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 98/391 (25%), Positives = 158/391 (40%), Gaps = 68/391 (17%)

Query: 48  DVCGGGCG--FAMAISDSRKLITWGSTDD--LGQSYVTSGKHGEIPEPFPLPTEASIVKA 103
           DV    CG   A+ ++   +  +WG   +  LG    ++ +H   P+        +I   
Sbjct: 313 DVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQH---PKLIDALNTTNIELV 369

Query: 104 AAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRS 163
           A G  H  AVT  G++YTWG  +       FG L  G  +   V +R  +FL E +    
Sbjct: 370 ACGEYHSCAVTLSGDLYTWGKGD-------FGILGHGNEVSHWVPKR-VNFLMEGI---- 417

Query: 164 QVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRI 223
            VS  + G         +G+        +    T      GD      P  V    G+R 
Sbjct: 418 HVSSIACGPYHTAVVTSAGQ------LFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRT 471

Query: 224 ATVAAGGRHTLALSDI------------GQVWGWGYGGEGQLGLGSRIRMVSSPHPIP-C 270
              A G  HT A+ ++            G+++ WG G + +LG G +      P  +P C
Sbjct: 472 VRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDK-----EPKLVPTC 526

Query: 271 IESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
           +         AAL             V  N+ + +ACG   +  +T +G + T G  +YG
Sbjct: 527 V---------AAL-------------VEPNFCQ-VACGHSLTVALTTSGHVYTMGSPVYG 563

Query: 331 QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
           Q G    D ++       L    +E +A G +H   ++S  +VY +G    G+LG G   
Sbjct: 564 QLGNPHADGKVPTRVDGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDAD 623

Query: 391 AETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
               P L++  SL++   KS++CG+  TA +
Sbjct: 624 DRNSPTLVE--SLKDKQVKSIACGSNFTAAV 652


>gi|326913438|ref|XP_003203045.1| PREDICTED: hypothetical protein LOC100541592 [Meleagris gallopavo]
          Length = 1302

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/170 (34%), Positives = 93/170 (54%), Gaps = 4/170 (2%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           I+CG  H+AV+T  G L  FG   +GQ G GS +    P CV +L   + +    G  HT
Sbjct: 57  ISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVHKPTCVKALKPEKTKLAVCGRNHT 116

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHS-KSVSCGARHTAVIAD 423
           +  + +G++YA GGN  GQLG G  +  T   L+      N H  K ++ G+  +A + +
Sbjct: 117 LVYTENGNMYAAGGNGEGQLGLGDTEERTTFHLISF--FTNQHKIKQLAAGSYTSAAVTE 174

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           DG++F WG N  GQ+GL D    ++P QV + G    +++CG++H+  + 
Sbjct: 175 DGQLFVWGDNSEGQIGLADKTYVSVPCQVDV-GKPISSISCGYYHSAFIT 223



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 97/304 (31%), Positives = 138/304 (45%), Gaps = 57/304 (18%)

Query: 213 CLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR--------IRMVSS 264
           C+  L P  +      G  HTL  ++ G ++  G  GEGQLGLG          I   ++
Sbjct: 97  CVKALKPE-KTKLAVCGRNHTLVYTENGNMYAAGGNGEGQLGLGDTEERTTFHLISFFTN 155

Query: 265 PHPIPCIESSYGKDRSAALSRGSV------NSEGP-------GFRVP-----GNYVKGIA 306
            H I  +  + G   SAA++          NSEG           VP     G  +  I+
Sbjct: 156 QHKIKQL--AAGSYTSAAVTEDGQLFVWGDNSEGQIGLADKTYVSVPCQVDVGKPISSIS 213

Query: 307 CGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS------LLGI--QIEGVA 358
           CG  HSA IT  G L TFG    G+ G       L P  + +      +LGI  ++  VA
Sbjct: 214 CGYYHSAFITGDGELYTFGEPENGKLG-------LLPEQLKNSRVPQPVLGIMEKVNKVA 266

Query: 359 AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAET-LPRLLDAPSLENVHSKSVSCGARH 417
            G  HT+ ++  G VY FG  Q+GQLG G    +T +P+      L     ++++CG  H
Sbjct: 267 CGGEHTVVLTETG-VYTFGLGQYGQLGHGTLLFKTSVPK--SVKHLRKCKIRNITCGESH 323

Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC------VPRNVACGWWHTLL 471
           TAVIA++G +F +G  ++G+LGLG   + N  +Q     C          VACG  H L+
Sbjct: 324 TAVIAENGLMFTFGDGRHGKLGLG---EENFANQFDPALCSNFLSFTVLLVACGGCHMLV 380

Query: 472 LAVP 475
            A P
Sbjct: 381 FATP 384



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 79/285 (27%), Positives = 130/285 (45%), Gaps = 50/285 (17%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES-SYGKDRSAALS 284
           ++ G  HT  ++  G+++ +G    GQLGLGS+    ++ H   C+++    K + A   
Sbjct: 57  ISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSK----NTVHKPTCVKALKPEKTKLAVCG 112

Query: 285 RGSV--------------NSEGP---------------GFRVPGNYVKGIACGGRHSAVI 315
           R                 N EG                 F    + +K +A G   SA +
Sbjct: 113 RNHTLVYTENGNMYAAGGNGEGQLGLGDTEERTTFHLISFFTNQHKIKQLAAGSYTSAAV 172

Query: 316 TDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYA 375
           T+ G L  +G    GQ G         P  V   +G  I  ++ G +H+  I+ DG++Y 
Sbjct: 173 TEDGQLFVWGDNSEGQIGLADKTYVSVPCQVD--VGKPISSISCGYYHSAFITGDGELYT 230

Query: 376 FGGNQFGQLGTGGDQAET--LPRLLDAPSL---ENVHSKSVSCGARHTAVIADDGKVFCW 430
           FG  + G+LG   +Q +   +P+    P L   E V+   V+CG  HT V+ + G V+ +
Sbjct: 231 FGEPENGKLGLLPEQLKNSRVPQ----PVLGIMEKVN--KVACGGEHTVVLTETG-VYTF 283

Query: 431 GWNKYGQLGLGDVIDR-NIPSQVT-IEGCVPRNVACGWWHTLLLA 473
           G  +YGQLG G ++ + ++P  V  +  C  RN+ CG  HT ++A
Sbjct: 284 GLGQYGQLGHGTLLFKTSVPKSVKHLRKCKIRNITCGESHTAVIA 328


>gi|126272576|ref|XP_001362510.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Monodelphis domestica]
          Length = 1049

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 119/260 (45%), Gaps = 34/260 (13%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP------CIESSYG 276
           I  V+ G  HTLAL+D GQV+ WG   +GQLGL      +  P  I        ++ + G
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIKVPRNIKSLTDIQIVQIACG 145

Query: 277 KDRSAALSRGS------VNSEGP---GFRVPGN----YVKG--------IACGGRHSAVI 315
              S ALS+GS       N  G    GF +        +K         +A GG HS V+
Sbjct: 146 YYHSLALSKGSEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGGAHSFVL 205

Query: 316 TDAGALLTFGWGL--YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDV 373
           T +GA+  FGWG   +GQ G    +D   PN + SL   +I  +  G  HT  ++ +G V
Sbjct: 206 TLSGAI--FGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263

Query: 374 YAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGW 432
           + FG   +GQLG      E  PR      L       ++CG +HT A +   G+++ +G 
Sbjct: 264 FTFGAGGYGQLGHNSTSHEINPR--KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGL 321

Query: 433 NKYGQLGLGDVIDRNIPSQV 452
              GQLG G   +R  P  V
Sbjct: 322 GGNGQLGTGSTSNRKSPFTV 341



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 83/277 (29%), Positives = 127/277 (45%), Gaps = 34/277 (12%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES------SY 275
           ++  V  G RHT+ + D G V+  G    GQLG     +    P  +  +++      S 
Sbjct: 35  KVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLG---HEKSRKKPEQVVALDAQNIVAVSC 91

Query: 276 GKDRSAALS-RGSVNSEG---------PG----FRVPGNY-------VKGIACGGRHSAV 314
           G+  + AL+ +G V + G         PG     +VP N        +  IACG  HS  
Sbjct: 92  GEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLA 151

Query: 315 ITDAGALLTFGWGLYGQCGQG-STDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDV 373
           ++    + ++G   +GQ G G     + +P  + SLLGI    VAAG  H+  ++  G +
Sbjct: 152 LSKGSEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI 211

Query: 374 YAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWN 433
           + +G N+FGQLG   +    +P LL   SL +     + CG  HTA +  +G VF +G  
Sbjct: 212 FGWGRNKFGQLGLNDENDRFVPNLLK--SLRSQKIVYICCGEDHTAALTKEGGVFTFGAG 269

Query: 434 KYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            YGQLG         P +V  + G +   +ACG  HT
Sbjct: 270 GYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/176 (31%), Positives = 93/176 (52%), Gaps = 7/176 (3%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ + CG RH+  + D G + T G    GQ G   +  +  P  V +L    I  V+ G 
Sbjct: 36  VQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93

Query: 362 WHTICISSDGDVYAFGGNQFGQLGT-GGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            HT+ ++  G VYA+G +  GQLG  G ++   +PR  +  SL ++    ++CG  H+  
Sbjct: 94  AHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIKVPR--NIKSLTDIQIVQIACGYYHSLA 151

Query: 421 IADDGKVFCWGWNKYGQLGLG-DVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLAV 474
           ++   +VF WG NK+GQLGLG ++  ++ P  + ++ G     VA G  H+ +L +
Sbjct: 152 LSKGSEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/160 (34%), Positives = 83/160 (51%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  L P      +  +++ V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G +++   P  + A   +N+   +VSCG  HT  + D G+V+ WG +  GQL
Sbjct: 61  NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDTDGQL 116

Query: 439 GLGDV-----IDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           GL        + RNI S   I+      +ACG++H+L L+
Sbjct: 117 GLPGTEEYIKVPRNIKSLTDIQIV---QIACGYYHSLALS 153



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 80/309 (25%), Positives = 126/309 (40%), Gaps = 58/309 (18%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           +++    CG A  +A++D  ++  WG   D       + ++ ++P      T+  IV+ A
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIKVPRNIKSLTDIQIVQIA 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS---- 160
            G+ H +A+++G EV++WG  +        G L  G       FE +S    + +     
Sbjct: 144 CGYYHSLALSKGSEVFSWGQNK-------HGQLGLG-------FELKSQSAPQLIKSLLG 189

Query: 161 -PRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
            P  QV  ++GG  S          G  R +              DEN    P L+    
Sbjct: 190 IPFMQV--AAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRFVPNLLKSLR 240

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
             +I  +  G  HT AL+  G V+ +G GG GQLG  S    + +P  +           
Sbjct: 241 SQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV----------- 288

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTD 338
                          F + G+ V  IACG +H SA +  +G + +FG G  GQ G GST 
Sbjct: 289 ---------------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTS 333

Query: 339 DELSPNCVS 347
           +  SP  V 
Sbjct: 334 NRKSPFTVK 342



 Score = 41.6 bits (96), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 54/244 (22%), Positives = 98/244 (40%), Gaps = 59/244 (24%)

Query: 36  VRLPLTVGSAWR-DVCGGGCGF--AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPF 92
           +++P  + S     +    CG+  ++A+S   ++ +WG             KHG++   F
Sbjct: 125 IKVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQ-----------NKHGQLGLGF 173

Query: 93  PLPTEAS-----------IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGT 141
            L ++++            ++ AAG AH   +T  G ++ WG  +       FG L    
Sbjct: 174 ELKSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNK-------FGQLGLND 226

Query: 142 GLDKDVFERQSSFLTEQV-------SPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLA 194
             D+ V     S  ++++          + +++  G  + G  G G              
Sbjct: 227 ENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYG-------------- 272

Query: 195 KQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLAL-SDIGQVWGWGYGGEGQL 253
            Q   +S+S + N    P  V    G  +  +A G +HT A     G+++ +G GG GQL
Sbjct: 273 -QLGHNSTSHEIN----PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQL 327

Query: 254 GLGS 257
           G GS
Sbjct: 328 GTGS 331


>gi|326680006|ref|XP_003201431.1| PREDICTED: RCC1 domain-containing protein 1 [Danio rerio]
          Length = 410

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 111/241 (46%), Gaps = 39/241 (16%)

Query: 272 ESSYGKDRSAAL---SRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL 328
           E     + +AAL   S G V  + P F         +  G  H+ ++T  G L ++G G 
Sbjct: 156 EHELSAEHTAALPLVSGGFVQHKPPFFHPLKLCAVSLVLGSEHALLLTADGTLYSWGSGS 215

Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQL---- 384
           +GQ G G+      P  V +L G+ I+ VAAG WH+  +SS GD+Y +G N+ GQL    
Sbjct: 216 HGQLGHGALTSLEDPQAVEALWGVPIKAVAAGNWHSAAVSSGGDLYMWGWNESGQLGLPS 275

Query: 385 -----------GTGGDQA----------------ETLPRLLDAPSLENVHSKSVSCGARH 417
                      G+G D                  +  P L+D  ++  +    +SCG+RH
Sbjct: 276 RGLEEEKRRGNGSGNDDQPMNTDEKSQTDVFISIQAFPALVDIANMSEI--SRISCGSRH 333

Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV---TIEGCVPRNVACGWWHTLLLAV 474
           TA +   G ++ WGW +YGQLG G     + P+ V   +      ++V CG W+T +  V
Sbjct: 334 TAAVTSAGDLYTWGWGQYGQLGHGTEHSTDEPTPVDYFSSHSLSVKDVVCGSWNTFVSVV 393

Query: 475 P 475
           P
Sbjct: 394 P 394



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 99/255 (38%), Gaps = 57/255 (22%)

Query: 22  GALPQRSPILSPL-VVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTD--DLGQS 78
           G +  + P   PL +  + L +GS            A+ ++    L +WGS     LG  
Sbjct: 173 GFVQHKPPFFHPLKLCAVSLVLGSE----------HALLLTADGTLYSWGSGSHGQLGHG 222

Query: 79  YVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLS 138
            +TS    E P+         I   AAG  H  AV+ GG++Y WGW E   SG++     
Sbjct: 223 ALTSL---EDPQAVEALWGVPIKAVAAGNWHSAAVSSGGDLYMWGWNE---SGQL----- 271

Query: 139 TGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTA 198
              GL     E +                   G  SG D +    +   +  + ++ Q  
Sbjct: 272 ---GLPSRGLEEEKR----------------RGNGSGNDDQPMNTDEKSQTDVFISIQ-- 310

Query: 199 ESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR 258
                      AFP LV +     I+ ++ G RHT A++  G ++ WG+G  GQLG G+ 
Sbjct: 311 -----------AFPALVDIANMSEISRISCGSRHTAAVTSAGDLYTWGWGQYGQLGHGTE 359

Query: 259 IRMVSSPHPIPCIES 273
                 P P+    S
Sbjct: 360 -HSTDEPTPVDYFSS 373


>gi|282722852|gb|ADA84472.1| retinitis pigmentosa GTPase regulator protein 2 ORF15 [Danio rerio]
          Length = 1413

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 96/293 (32%), Positives = 139/293 (47%), Gaps = 48/293 (16%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS--------RIRMVSSPHPIPCIES 273
           R+   A G  HTL  +  G ++  G   EGQLGLG          +   +   PI  +  
Sbjct: 89  RVKLTACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIKML-- 146

Query: 274 SYGKDRSAALS-------RGSVNSEG------------PGFRVPGNYVKGIACGGRHSAV 314
           + G + SAAL+       RG  NSEG            P     G  V  ++CG  HSA 
Sbjct: 147 AAGSNTSAALTQDGRLYMRGD-NSEGQIGLGKESNALTPQEVSVGKRVFWVSCGYYHSAF 205

Query: 315 ITDAGALLTFGWGLYGQCGQGSTD--DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGD 372
           +T  GAL TFG    G+ G  +    +   P  V+ +    ++ VA G  HT+ ++ + +
Sbjct: 206 VTVDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPDRVVQ-VACGGGHTVALT-ENE 263

Query: 373 VYAFGGNQFGQLGTGGDQAET-LPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWG 431
           VY+FG  QFGQLG G    E+ LPR+++         K  +CG  HTA+I D+G ++ +G
Sbjct: 264 VYSFGLGQFGQLGHGTFIFESRLPRVVE--HFRKGRVKHAACGENHTALITDNGLLYTFG 321

Query: 432 WNKYGQLGLGDVIDRNIPSQVTIEGCVPR-------NVACGWWHTLLLAVPPT 477
             ++G+LGLG   + N  +Q     C PR       +V CG  H L+LA P T
Sbjct: 322 DGRHGKLGLG---EENFTNQFKPTLC-PRFLDYHVHSVTCGGCHMLVLAKPRT 370



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 93/170 (54%), Gaps = 2/170 (1%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           I+CG  H+A++T+ G L  FG   +GQ G G+      P CV +L   +++  A G  HT
Sbjct: 41  ISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALRSERVKLTACGRTHT 100

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           +  +S G++YA GGN  GQLG G     T   L++  + +    K ++ G+  +A +  D
Sbjct: 101 LVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGP-IKMLAAGSNTSAALTQD 159

Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAV 474
           G+++  G N  GQ+GLG   +   P +V++ G     V+CG++H+  + V
Sbjct: 160 GRLYMRGDNSEGQIGLGKESNALTPQEVSV-GKRVFWVSCGYYHSAFVTV 208



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 54/110 (49%), Gaps = 19/110 (17%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPS---LENVHSKSVSCGARHTAVIAD 423
           I   G V+ FG ++F                 +APS   L+N     +SCG  HTA++ +
Sbjct: 9   IPESGAVFTFGKSKFAD---------------NAPSKFWLKNDVPLRISCGDEHTALVTE 53

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
           +GK+F +G N +GQLGLG     N P+ V  +     +  ACG  HTL+ 
Sbjct: 54  NGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALRSERVKLTACGRTHTLVF 103


>gi|23503098|sp|Q92834.2|RPGR_HUMAN RecName: Full=X-linked retinitis pigmentosa GTPase regulator;
           Flags: Precursor
 gi|119579846|gb|EAW59442.1| retinitis pigmentosa GTPase regulator, isoform CRA_b [Homo sapiens]
          Length = 1020

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 98/303 (32%), Positives = 143/303 (47%), Gaps = 45/303 (14%)

Query: 208 LSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR--------I 259
           +S   C+  L P  ++   A G  HTL  ++ G V+  G   EGQLGLG          I
Sbjct: 75  ISKPTCVKALKPE-KVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVI 133

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSV------NSEG------------PGFRVPGNY 301
              +S H I  +  S G + SAAL+          NSEG            P     G  
Sbjct: 134 SFFTSEHKIKQL--SAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKP 191

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST--DDELSPNCVSSLLGIQIEGVAA 359
           V  I+CG  HSA +T  G L  FG    G+ G  +    +  +P  VS +    I+ VA 
Sbjct: 192 VSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVIQ-VAC 250

Query: 360 GLWHTICISSDGDVYAFGGNQFGQLGTGGDQAET-LPRLLDAPSLENVHSKS---VSCGA 415
           G  HT+ ++ +  VY FG  QFGQLG G    ET  P++     +EN+  ++   +SCG 
Sbjct: 251 GGEHTVVLTENA-VYTFGLGQFGQLGLGTFLFETSEPKV-----IENIRDQTISYISCGE 304

Query: 416 RHTAVIADDGKVFCWGWNKYGQLGLG--DVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
            HTA+I D G ++ +G  ++G+LGLG  +  +  IP+  +     + + VACG  H ++ 
Sbjct: 305 NHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVF 364

Query: 473 AVP 475
           A P
Sbjct: 365 AAP 367



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/170 (35%), Positives = 93/170 (54%), Gaps = 2/170 (1%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           ++CG  HSAV+T    L  FG   +GQ G GS      P CV +L   +++  A G  HT
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHT 99

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           +  +  G+VYA GGN  GQLG G  +      ++   + E+   K +S G+  +A + +D
Sbjct: 100 LVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEH-KIKQLSAGSNTSAALTED 158

Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAV 474
           G++F WG N  GQ+GL +V +  +P QVTI G     ++CG++H+  +  
Sbjct: 159 GRLFMWGDNSEGQIGLKNVSNVCVPQQVTI-GKPVSWISCGYYHSAFVTT 207



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 69/284 (24%), Positives = 127/284 (44%), Gaps = 48/284 (16%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIE------SSYGKDR 279
           ++ G  H+  ++   +++ +G    GQLGLGS+   +S P  +  ++      ++ G++ 
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSK-SAISKPTCVKALKPEKVKLAACGRNH 98

Query: 280 SAALSRGSV------NSEGP---------------GFRVPGNYVKGIACGGRHSAVITDA 318
           +   + G        N+EG                 F    + +K ++ G   SA +T+ 
Sbjct: 99  TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTED 158

Query: 319 GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           G L  +G    GQ G  +  +   P  V+  +G  +  ++ G +H+  +++DG++Y FG 
Sbjct: 159 GRLFMWGDNSEGQIGLKNVSNVCVPQQVT--IGKPVSWISCGYYHSAFVTTDGELYVFGE 216

Query: 379 NQFGQLGTGGDQAETLPRLL----DAPSL-ENVHSK--SVSCGARHTAVIADDGKVFCWG 431
            + G+LG        LP  L      P L   +  K   V+CG  HT V+ ++  V+ +G
Sbjct: 217 PENGKLG--------LPNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTENA-VYTFG 267

Query: 432 WNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLA 473
             ++GQLGLG  +      +V   I       ++CG  HT L+ 
Sbjct: 268 LGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALIT 311



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 90/330 (27%), Positives = 142/330 (43%), Gaps = 66/330 (20%)

Query: 103 AAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPR 162
           AA G  H +  TEGG VY  G       G   G L  G   +++ F   S F +E     
Sbjct: 92  AACGRNHTLVSTEGGNVYATG-------GNNEGQLGLGDTEERNTFHVISFFTSEH--KI 142

Query: 163 SQVSRSSGGTSSGT-DGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSA--FPCLV 215
            Q+S  S  +++ T DGR    G   EG    +I L            +N+S    P  V
Sbjct: 143 KQLSAGSNTSAALTEDGRLFMWGDNSEG----QIGL------------KNVSNVCVPQQV 186

Query: 216 TLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSY 275
           T+  G  ++ ++ G  H+  ++  G+++ +G    G+LGL +++                
Sbjct: 187 TI--GKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQL---------------L 229

Query: 276 GKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG 335
           G  R+  L             +P   ++ +ACGG H+ V+T+  A+ TFG G +GQ G G
Sbjct: 230 GNHRTPQLVS----------EIPEKVIQ-VACGGEHTVVLTE-NAVYTFGLGQFGQLGLG 277

Query: 336 STDDELS-PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAET- 393
           +   E S P  + ++    I  ++ G  HT  I+  G +Y FG  + G+LG G +     
Sbjct: 278 TFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNH 337

Query: 394 -LPRLLDAPSLENVHSKSVSCGARHTAVIA 422
            +P L    +      K V+CG  H  V A
Sbjct: 338 FIPTL--CSNFLRFIVKLVACGGCHMVVFA 365


>gi|355749434|gb|EHH53833.1| Putative E3 ubiquitin-protein ligase HERC6 [Macaca fascicularis]
          Length = 1020

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/263 (31%), Positives = 123/263 (46%), Gaps = 40/263 (15%)

Query: 214 LVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES 273
           L TLN    +  V+ G  H+LA+   G+V+ WG G EGQLG+G    +  +P  I  +  
Sbjct: 72  LETLN----VDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLN- 126

Query: 274 SYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCG 333
                                    G  +  ++CG  HS  ++    + ++G   +GQ G
Sbjct: 127 -------------------------GIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLG 161

Query: 334 QGS-TDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAE 392
            G     + SP  V SL GI +  VAAG  H+  +S  G  + +G N  GQL   G    
Sbjct: 162 LGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSG---R 218

Query: 393 TLPRLLDAP----SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNI 448
            +P   + P    +L+N+    +SCG  HTAV+  DGKVF +G N  GQLG     ++  
Sbjct: 219 NVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRG 278

Query: 449 PSQVT-IEGCVPRNVACGWWHTL 470
           P  V  I+G V + + CG +HTL
Sbjct: 279 PQLVERIDGLVSQ-IDCGSYHTL 300



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 90/186 (48%), Gaps = 13/186 (6%)

Query: 296 RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
           R PG  +   A G RHS ++     +L+ G    GQ G+        P  + +L  + ++
Sbjct: 19  RSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVD 78

Query: 356 GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGG-DQAETLPRLLDAPSLENVHSKSVSCG 414
            V+ G  H++ +   G V+A+G    GQLG G   +    P+ +   +L  +    VSCG
Sbjct: 79  LVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIT--TLNGIKIIQVSCG 136

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV------TIEGCVPRNVACGWWH 468
             H+  ++ D +VF WG N +GQLGLG    + +PSQ       ++EG     VA G  H
Sbjct: 137 HYHSLALSKDSQVFSWGKNSHGQLGLG----KEVPSQASPQRVRSLEGIPLAQVAAGGAH 192

Query: 469 TLLLAV 474
           +  L++
Sbjct: 193 SFALSL 198



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 102/232 (43%), Gaps = 37/232 (15%)

Query: 206 ENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSP 265
           + +S  P  +T   G++I  V+ G  H+LALS   QV+ WG    GQLGLG  +   +SP
Sbjct: 113 KEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASP 172

Query: 266 HPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFG 325
             +  +E                          G  +  +A GG HS  ++  G   +FG
Sbjct: 173 QRVRSLE--------------------------GIPLAQVAAGGAHSFALSLCGT--SFG 204

Query: 326 W-----GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
           W     G     G+        P  + +L  + +  ++ G  HT  +  DG V+ FG N 
Sbjct: 205 WGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNS 264

Query: 381 FGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
            GQLG      +  P+L++   ++ + S+ + CG+ HT A +   G+V  +G
Sbjct: 265 SGQLGYSPTPEKRGPQLVE--RIDGLVSQ-IDCGSYHTLAYVHTTGQVISFG 313


>gi|334187769|ref|NP_001190338.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|332005321|gb|AED92704.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1139

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 58/169 (34%), Positives = 94/169 (55%), Gaps = 2/169 (1%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ IACGG+H+ ++T  G   ++G    G+ G G   +   P  + +L    IE VA G 
Sbjct: 348 VQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALNTTNIELVACGE 407

Query: 362 WHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
           +H+  ++  GD+Y +G   FG LG G + +  +P+ ++   +E +H  S++CG  HTAV+
Sbjct: 408 YHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNF-LMEGIHVSSIACGPYHTAVV 466

Query: 422 ADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
              G++F +G   +G LG GD     IP +V +++G      ACG WHT
Sbjct: 467 TSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHT 515



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 120/282 (42%), Gaps = 44/282 (15%)

Query: 205 DENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSS 264
           D N+   P L+       I  VA G  H+ A++  G ++ WG G  G LG G+ +     
Sbjct: 383 DSNVQ-HPKLIDALNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEV----- 436

Query: 265 PHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTF 324
            H +P                  VN     F + G +V  IACG  H+AV+T AG L TF
Sbjct: 437 SHWVP----------------KRVN-----FLMEGIHVSSIACGPYHTAVVTSAGQLFTF 475

Query: 325 GWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI------------SSDGD 372
           G G +G  G G       P  V SL G++    A G+WHT  +             S G 
Sbjct: 476 GDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 535

Query: 373 VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGW 432
           ++ +G     +LG G  + + +P  + A  L   +   V+CG   T  +   G V+  G 
Sbjct: 536 LFTWGDGDKSRLGHGDKEPKLVPTCVAA--LVEPNFCQVACGHSLTVALTTSGHVYTMGS 593

Query: 433 NKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLL 472
             YGQLG     D  +P++V   +       +ACG +H  +L
Sbjct: 594 PVYGQLG-NPHADGKVPTRVDGKLHKSFVEEIACGAYHVAVL 634



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/262 (28%), Positives = 121/262 (46%), Gaps = 42/262 (16%)

Query: 217 LNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYG 276
           L  G+ ++++A G  HT  ++  GQ++ +G G  G LG G R + V  P  +  ++    
Sbjct: 447 LMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDR-KSVFIPREVDSLK---- 501

Query: 277 KDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDA------------GALLTF 324
                            G R     V+  ACG  H+A + +             G L T+
Sbjct: 502 -----------------GLRT----VRA-ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 539

Query: 325 GWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQL 384
           G G   + G G  + +L P CV++L+      VA G   T+ +++ G VY  G   +GQL
Sbjct: 540 GDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQL 599

Query: 385 GTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVI 444
           G      + +P  +D   L     + ++CGA H AV+    +V+ WG    G+LG GD  
Sbjct: 600 GNPHADGK-VPTRVDG-KLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDAD 657

Query: 445 DRNIPSQV-TIEGCVPRNVACG 465
           DRN P+ V +++    +++ACG
Sbjct: 658 DRNSPTLVESLKDKQVKSIACG 679



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 98/391 (25%), Positives = 158/391 (40%), Gaps = 68/391 (17%)

Query: 48  DVCGGGCG--FAMAISDSRKLITWGSTDD--LGQSYVTSGKHGEIPEPFPLPTEASIVKA 103
           DV    CG   A+ ++   +  +WG   +  LG    ++ +H   P+        +I   
Sbjct: 347 DVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQH---PKLIDALNTTNIELV 403

Query: 104 AAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRS 163
           A G  H  AVT  G++YTWG  +       FG L  G  +   V +R  +FL E +    
Sbjct: 404 ACGEYHSCAVTLSGDLYTWGKGD-------FGILGHGNEVSHWVPKR-VNFLMEGI---- 451

Query: 164 QVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRI 223
            VS  + G         +G+        +    T      GD      P  V    G+R 
Sbjct: 452 HVSSIACGPYHTAVVTSAGQ------LFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRT 505

Query: 224 ATVAAGGRHTLALSDI------------GQVWGWGYGGEGQLGLGSRIRMVSSPHPIP-C 270
              A G  HT A+ ++            G+++ WG G + +LG G +      P  +P C
Sbjct: 506 VRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDK-----EPKLVPTC 560

Query: 271 IESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
           +         AAL             V  N+ + +ACG   +  +T +G + T G  +YG
Sbjct: 561 V---------AAL-------------VEPNFCQ-VACGHSLTVALTTSGHVYTMGSPVYG 597

Query: 331 QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
           Q G    D ++       L    +E +A G +H   ++S  +VY +G    G+LG G   
Sbjct: 598 QLGNPHADGKVPTRVDGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDAD 657

Query: 391 AETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
               P L++  SL++   KS++CG+  TA +
Sbjct: 658 DRNSPTLVE--SLKDKQVKSIACGSNFTAAV 686


>gi|387540886|gb|AFJ71070.1| putative E3 ubiquitin-protein ligase HERC6 isoform 1 [Macaca
           mulatta]
          Length = 1020

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/263 (31%), Positives = 123/263 (46%), Gaps = 40/263 (15%)

Query: 214 LVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES 273
           L TLN    +  V+ G  H+LA+   G+V+ WG G EGQLG+G    +  +P  I  +  
Sbjct: 72  LETLN----VDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLN- 126

Query: 274 SYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCG 333
                                    G  +  ++CG  HS  ++    + ++G   +GQ G
Sbjct: 127 -------------------------GIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLG 161

Query: 334 QGS-TDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAE 392
            G     + SP  V SL GI +  VAAG  H+  +S  G  + +G N  GQL   G    
Sbjct: 162 LGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSG---R 218

Query: 393 TLPRLLDAP----SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNI 448
            +P   + P    +L+N+    +SCG  HTAV+  DGKVF +G N  GQLG     ++  
Sbjct: 219 NVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRG 278

Query: 449 PSQVT-IEGCVPRNVACGWWHTL 470
           P  V  I+G V + + CG +HTL
Sbjct: 279 PQLVERIDGLVSQ-IDCGSYHTL 300



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 91/186 (48%), Gaps = 13/186 (6%)

Query: 296 RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
           R PG  +   A G RHS ++     +L+ G    GQ G+        P  + +L  + ++
Sbjct: 19  RSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVD 78

Query: 356 GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL-PRLLDAPSLENVHSKSVSCG 414
            V+ G  H++ +   G V+A+G    GQLG G  +  +  P+ +   +L  +    VSCG
Sbjct: 79  LVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIT--TLNGIKIIQVSCG 136

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV------TIEGCVPRNVACGWWH 468
             H+  ++ D +VF WG N +GQLGLG    + +PSQ       ++EG     VA G  H
Sbjct: 137 HYHSLALSKDSQVFSWGKNSHGQLGLG----KEVPSQASPQRVRSLEGIPLAQVAAGGAH 192

Query: 469 TLLLAV 474
           +  L++
Sbjct: 193 SFALSL 198



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 102/232 (43%), Gaps = 37/232 (15%)

Query: 206 ENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSP 265
           + +S  P  +T   G++I  V+ G  H+LALS   QV+ WG    GQLGLG  +   +SP
Sbjct: 113 KEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASP 172

Query: 266 HPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFG 325
             +  +E                          G  +  +A GG HS  ++  G   +FG
Sbjct: 173 QRVRSLE--------------------------GIPLAQVAAGGAHSFALSLCGT--SFG 204

Query: 326 W-----GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
           W     G     G+        P  + +L  + +  ++ G  HT  +  DG V+ FG N 
Sbjct: 205 WGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNS 264

Query: 381 FGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
            GQLG      +  P+L++   ++ + S+ + CG+ HT A +   G+V  +G
Sbjct: 265 SGQLGYSPTPEKRGPQLVE--RIDGLVSQ-IDCGSYHTLAYVHTTGQVISFG 313


>gi|384939244|gb|AFI33227.1| putative E3 ubiquitin-protein ligase HERC6 isoform 1 [Macaca
           mulatta]
          Length = 1020

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/263 (31%), Positives = 123/263 (46%), Gaps = 40/263 (15%)

Query: 214 LVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES 273
           L TLN    +  V+ G  H+LA+   G+V+ WG G EGQLG+G    +  +P  I  +  
Sbjct: 72  LETLN----VDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLN- 126

Query: 274 SYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCG 333
                                    G  +  ++CG  HS  ++    + ++G   +GQ G
Sbjct: 127 -------------------------GIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLG 161

Query: 334 QGS-TDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAE 392
            G     + SP  V SL GI +  VAAG  H+  +S  G  + +G N  GQL   G    
Sbjct: 162 LGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSG---R 218

Query: 393 TLPRLLDAP----SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNI 448
            +P   + P    +L+N+    +SCG  HTAV+  DGKVF +G N  GQLG     ++  
Sbjct: 219 NVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRG 278

Query: 449 PSQVT-IEGCVPRNVACGWWHTL 470
           P  V  I+G V + + CG +HTL
Sbjct: 279 PQLVERIDGLVSQ-IDCGSYHTL 300



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 91/186 (48%), Gaps = 13/186 (6%)

Query: 296 RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
           R PG  +   A G RHS ++     +L+ G    GQ G+        P  + +L  + ++
Sbjct: 19  RSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVD 78

Query: 356 GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL-PRLLDAPSLENVHSKSVSCG 414
            V+ G  H++ +   G V+A+G    GQLG G  +  +  P+ +   +L  +    VSCG
Sbjct: 79  LVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIT--TLNGIKIIQVSCG 136

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV------TIEGCVPRNVACGWWH 468
             H+  ++ D +VF WG N +GQLGLG    + +PSQ       ++EG     VA G  H
Sbjct: 137 HYHSLALSKDSQVFSWGKNSHGQLGLG----KEVPSQASPQRVRSLEGIPLAQVAAGGAH 192

Query: 469 TLLLAV 474
           +  L++
Sbjct: 193 SFALSL 198



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 102/232 (43%), Gaps = 37/232 (15%)

Query: 206 ENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSP 265
           + +S  P  +T   G++I  V+ G  H+LALS   QV+ WG    GQLGLG  +   +SP
Sbjct: 113 KEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASP 172

Query: 266 HPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFG 325
             +  +E                          G  +  +A GG HS  ++  G   +FG
Sbjct: 173 QRVRSLE--------------------------GIPLAQVAAGGAHSFALSLCGT--SFG 204

Query: 326 W-----GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
           W     G     G+        P  + +L  + +  ++ G  HT  +  DG V+ FG N 
Sbjct: 205 WGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNS 264

Query: 381 FGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
            GQLG      +  P+L++   ++ + S+ + CG+ HT A +   G+V  +G
Sbjct: 265 SGQLGYSPTPEKRGPQLVE--RIDGLVSQ-IDCGSYHTLAYVHTTGQVISFG 313


>gi|357460713|ref|XP_003600638.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355489686|gb|AES70889.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 1032

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/305 (28%), Positives = 135/305 (44%), Gaps = 45/305 (14%)

Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM-VSSPHP 267
           S  P L+     + +  VA GG H   ++  G+V+ WG G  G+LG   RI M +SSP  
Sbjct: 292 SLVPKLLESTAMLDVQNVALGGNHAAIVTKQGEVYCWGQGKCGRLG--QRIDMDISSPKI 349

Query: 268 IPCIES-----------------------SYGKDRSAA--LSRGSVNSE----GPGFRVP 298
           +  +                         ++G D S +  +  G + S+         V 
Sbjct: 350 VDTLSDIRVKNVACGEYHTCALTDSGEVYAWGNDVSCSDLVDEGRIRSQWLTHKLSLPVE 409

Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
           G  +  IACG  H+A+++  G L T+G G +G  G GS     SP  V SL G+ +  VA
Sbjct: 410 GISISSIACGEWHTAIVSSCGRLFTYGDGTFGVLGHGSYHSFSSPKEVESLKGLCVRSVA 469

Query: 359 AGLWHTICI-----------SSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVH 407
            G WHT  I           +S G ++ +G    G+LG   +  + +P  +    L +  
Sbjct: 470 CGTWHTAAIIEISAERFKYNTSTGKLFTWGDADEGRLGHADNVNKLVPTCVS--QLVDYD 527

Query: 408 SKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWW 467
              VSCG   T  + + GKVF  G  KYGQLG   V DR +  +  ++    + ++CG +
Sbjct: 528 FVQVSCGRMMTLALTNMGKVFAMGSAKYGQLGNPHVKDRAVVVEGMLKQEYVKMISCGSY 587

Query: 468 HTLLL 472
           H  +L
Sbjct: 588 HVAVL 592



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 85/286 (29%), Positives = 126/286 (44%), Gaps = 47/286 (16%)

Query: 205 DENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYG-------GEGQLGLGS 257
           D ++S+ P +V     +R+  VA G  HT AL+D G+V+ WG          EG++    
Sbjct: 341 DMDISS-PKIVDTLSDIRVKNVACGEYHTCALTDSGEVYAWGNDVSCSDLVDEGRIRSQW 399

Query: 258 RIRMVSSP------HPIPCIE------------SSYGKDRSAALSRGSVNSEGPGFRV-- 297
               +S P        I C E             +YG      L  GS +S      V  
Sbjct: 400 LTHKLSLPVEGISISSIACGEWHTAIVSSCGRLFTYGDGTFGVLGHGSYHSFSSPKEVES 459

Query: 298 -PGNYVKGIACGGRHSAVI-----------TDAGALLTFGWGLYGQCGQGSTDDELSPNC 345
             G  V+ +ACG  H+A I           T  G L T+G    G+ G     ++L P C
Sbjct: 460 LKGLCVRSVACGTWHTAAIIEISAERFKYNTSTGKLFTWGDADEGRLGHADNVNKLVPTC 519

Query: 346 VSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG--GDQAETLPRLLDAPSL 403
           VS L+      V+ G   T+ +++ G V+A G  ++GQLG     D+A  +  +L     
Sbjct: 520 VSQLVDYDFVQVSCGRMMTLALTNMGKVFAMGSAKYGQLGNPHVKDRAVVVEGMLKQE-- 577

Query: 404 ENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIP 449
              + K +SCG+ H AV+   G V+ WG  + G+LGLGD  +R  P
Sbjct: 578 ---YVKMISCGSYHVAVLTSSGSVYTWGKGENGELGLGDTENRYTP 620



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 74/141 (52%), Gaps = 14/141 (9%)

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
           L P  + S   + ++ VA G  H   ++  G+VY +G  + G+LG   D   + P+++D 
Sbjct: 293 LVPKLLESTAMLDVQNVALGGNHAAIVTKQGEVYCWGQGKCGRLGQRIDMDISSPKIVD- 351

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR-NIPSQ-------V 452
            +L ++  K+V+CG  HT  + D G+V+ WG      +   D++D   I SQ       +
Sbjct: 352 -TLSDIRVKNVACGEYHTCALTDSGEVYAWG----NDVSCSDLVDEGRIRSQWLTHKLSL 406

Query: 453 TIEGCVPRNVACGWWHTLLLA 473
            +EG    ++ACG WHT +++
Sbjct: 407 PVEGISISSIACGEWHTAIVS 427



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 80/315 (25%), Positives = 130/315 (41%), Gaps = 53/315 (16%)

Query: 89  PEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVF 148
           P+     ++  +   A G  H  A+T+ GEVY WG            D+S    +D+   
Sbjct: 347 PKIVDTLSDIRVKNVACGEYHTCALTDSGEVYAWG-----------NDVSCSDLVDEGRI 395

Query: 149 ERQSSFLTEQVS-PRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDEN 207
             +S +LT ++S P   +S SS           S    S  R  +    T      G  +
Sbjct: 396 --RSQWLTHKLSLPVEGISISSIACGEWHTAIVS----SCGRLFTYGDGTFGVLGHGSYH 449

Query: 208 LSAFPCLVTLNPGVRIATVAAGGRHTLALSDI-----------GQVWGWGYGGEGQLGLG 256
             + P  V    G+ + +VA G  HT A+ +I           G+++ WG   EG+LG  
Sbjct: 450 SFSSPKEVESLKGLCVRSVACGTWHTAAIIEISAERFKYNTSTGKLFTWGDADEGRLGHA 509

Query: 257 SRIRM-----VSSPHPIPCIESSYGKDRSAALSR-GSVNSEG---------PGFR----- 296
             +       VS       ++ S G+  + AL+  G V + G         P  +     
Sbjct: 510 DNVNKLVPTCVSQLVDYDFVQVSCGRMMTLALTNMGKVFAMGSAKYGQLGNPHVKDRAVV 569

Query: 297 ----VPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGI 352
               +   YVK I+CG  H AV+T +G++ T+G G  G+ G G T++  +P  V +L   
Sbjct: 570 VEGMLKQEYVKMISCGSYHVAVLTSSGSVYTWGKGENGELGLGDTENRYTPCFVEALRDR 629

Query: 353 QIEGVAAGLWHTICI 367
           Q++ +  G   T+ I
Sbjct: 630 QVDTITCGPSFTVAI 644



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 89/386 (23%), Positives = 152/386 (39%), Gaps = 61/386 (15%)

Query: 75  LGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVF 134
           + + +V +  +  +P+         +   A G  H   VT+ GEVY WG  +C   GR+ 
Sbjct: 281 VNERFVQNSIYSLVPKLLESTAMLDVQNVALGGNHAAIVTKQGEVYCWGQGKC---GRL- 336

Query: 135 GDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLA 194
                G  +D D+    S  + + +S   +V   + G         SGE  +    +S +
Sbjct: 337 -----GQRIDMDI---SSPKIVDTLSD-IRVKNVACGEYHTCALTDSGEVYAWGNDVSCS 387

Query: 195 KQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG 254
               E               V    G+ I+++A G  HT  +S  G+++ +G G  G LG
Sbjct: 388 DLVDEGRIRSQWLTHKLSLPV---EGISISSIACGEWHTAIVSSCGRLFTYGDGTFGVLG 444

Query: 255 LGSRIRMVSSPHPIP-----CIES-SYGKDRSAAL-----SRGSVN-SEGPGFR------ 296
            GS     SSP  +      C+ S + G   +AA+      R   N S G  F       
Sbjct: 445 HGS-YHSFSSPKEVESLKGLCVRSVACGTWHTAAIIEISAERFKYNTSTGKLFTWGDADE 503

Query: 297 --------------------VPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGS 336
                               V  ++V+ ++CG   +  +T+ G +   G   YGQ G   
Sbjct: 504 GRLGHADNVNKLVPTCVSQLVDYDFVQ-VSCGRMMTLALTNMGKVFAMGSAKYGQLGNPH 562

Query: 337 TDDELSPNCVSSLLGIQ-IEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLP 395
             D      V  +L  + ++ ++ G +H   ++S G VY +G  + G+LG G  +    P
Sbjct: 563 VKDRAV--VVEGMLKQEYVKMISCGSYHVAVLTSSGSVYTWGKGENGELGLGDTENRYTP 620

Query: 396 RLLDAPSLENVHSKSVSCGARHTAVI 421
             ++A  L +    +++CG   T  I
Sbjct: 621 CFVEA--LRDRQVDTITCGPSFTVAI 644


>gi|77403863|tpg|DAA05713.1| TPA_exp: RPGR ORF15 isoform [Homo sapiens]
          Length = 1152

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 98/303 (32%), Positives = 143/303 (47%), Gaps = 45/303 (14%)

Query: 208 LSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR--------I 259
           +S   C+  L P  ++   A G  HTL  ++ G V+  G   EGQLGLG          I
Sbjct: 75  ISKPTCVKALKPE-KVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVI 133

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSV------NSEG------------PGFRVPGNY 301
              +S H I  +  S G + SAAL+          NSEG            P     G  
Sbjct: 134 SFFTSEHKIKQL--SAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKP 191

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST--DDELSPNCVSSLLGIQIEGVAA 359
           V  I+CG  HSA +T  G L  FG    G+ G  +    +  +P  VS +    I+ VA 
Sbjct: 192 VSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVIQ-VAC 250

Query: 360 GLWHTICISSDGDVYAFGGNQFGQLGTGGDQAET-LPRLLDAPSLENVHSKS---VSCGA 415
           G  HT+ ++ +  VY FG  QFGQLG G    ET  P++     +EN+  ++   +SCG 
Sbjct: 251 GGEHTVVLTENA-VYTFGLGQFGQLGLGTFLFETSEPKV-----IENIRDQTISYISCGE 304

Query: 416 RHTAVIADDGKVFCWGWNKYGQLGLG--DVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
            HTA+I D G ++ +G  ++G+LGLG  +  +  IP+  +     + + VACG  H ++ 
Sbjct: 305 NHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVF 364

Query: 473 AVP 475
           A P
Sbjct: 365 AAP 367



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 60/170 (35%), Positives = 93/170 (54%), Gaps = 2/170 (1%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           ++CG  HSAV+T    L  FG   +GQ G GS      P CV +L   +++  A G  HT
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHT 99

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           +  +  G+VYA GGN  GQLG G  +      ++   + E+   K +S G+  +A + +D
Sbjct: 100 LVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEH-KIKQLSAGSNTSAALTED 158

Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAV 474
           G++F WG N  GQ+GL +V +  +P QVTI   V   ++CG++H+  +  
Sbjct: 159 GRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSW-ISCGYYHSAFVTT 207



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/279 (23%), Positives = 126/279 (45%), Gaps = 38/279 (13%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIE------SSYGKDR 279
           ++ G  H+  ++   +++ +G    GQLGLGS+   +S P  +  ++      ++ G++ 
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSK-SAISKPTCVKALKPEKVKLAACGRNH 98

Query: 280 SAALSRGSV------NSEGP---------------GFRVPGNYVKGIACGGRHSAVITDA 318
           +   + G        N+EG                 F    + +K ++ G   SA +T+ 
Sbjct: 99  TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTED 158

Query: 319 GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           G L  +G    GQ G  +  +   P  V+  +G  +  ++ G +H+  +++DG++Y FG 
Sbjct: 159 GRLFMWGDNSEGQIGLKNVSNVCVPQQVT--IGKPVSWISCGYYHSAFVTTDGELYVFGE 216

Query: 379 NQFGQLGTGGDQ--AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYG 436
            + G+LG           P+L+     + +    V+CG  HT V+ ++  V+ +G  ++G
Sbjct: 217 PENGKLGLPNQLLGNHRTPQLVSEIPEKVIQ---VACGGEHTVVLTENA-VYTFGLGQFG 272

Query: 437 QLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLA 473
           QLGLG  +      +V   I       ++CG  HT L+ 
Sbjct: 273 QLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALIT 311



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 90/330 (27%), Positives = 142/330 (43%), Gaps = 66/330 (20%)

Query: 103 AAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPR 162
           AA G  H +  TEGG VY  G       G   G L  G   +++ F   S F +E     
Sbjct: 92  AACGRNHTLVSTEGGNVYATG-------GNNEGQLGLGDTEERNTFHVISFFTSEH--KI 142

Query: 163 SQVSRSSGGTSSGT-DGR----GSGEEGSKRRRISLAKQTAESSSSGDENLS--AFPCLV 215
            Q+S  S  +++ T DGR    G   EG    +I L            +N+S    P  V
Sbjct: 143 KQLSAGSNTSAALTEDGRLFMWGDNSEG----QIGL------------KNVSNVCVPQQV 186

Query: 216 TLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSY 275
           T+  G  ++ ++ G  H+  ++  G+++ +G    G+LGL +++                
Sbjct: 187 TI--GKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQL---------------L 229

Query: 276 GKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG 335
           G  R+  L             +P   ++ +ACGG H+ V+T+  A+ TFG G +GQ G G
Sbjct: 230 GNHRTPQLVS----------EIPEKVIQ-VACGGEHTVVLTE-NAVYTFGLGQFGQLGLG 277

Query: 336 STDDELS-PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAET- 393
           +   E S P  + ++    I  ++ G  HT  I+  G +Y FG  + G+LG G +     
Sbjct: 278 TFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNH 337

Query: 394 -LPRLLDAPSLENVHSKSVSCGARHTAVIA 422
            +P L    +      K V+CG  H  V A
Sbjct: 338 FIPTL--CSNFLRFIVKLVACGGCHMVVFA 365


>gi|355569557|gb|EHH25458.1| Putative E3 ubiquitin-protein ligase HERC6 [Macaca mulatta]
          Length = 1020

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/263 (31%), Positives = 123/263 (46%), Gaps = 40/263 (15%)

Query: 214 LVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES 273
           L TLN    +  V+ G  H+LA+   G+V+ WG G EGQLG+G    +  +P  I  +  
Sbjct: 72  LETLN----VDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLN- 126

Query: 274 SYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCG 333
                                    G  +  ++CG  HS  ++    + ++G   +GQ G
Sbjct: 127 -------------------------GIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLG 161

Query: 334 QGS-TDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAE 392
            G     + SP  V SL GI +  VAAG  H+  +S  G  + +G N  GQL   G    
Sbjct: 162 LGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSG---R 218

Query: 393 TLPRLLDAP----SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNI 448
            +P   + P    +L+N+    +SCG  HTAV+  DGKVF +G N  GQLG     ++  
Sbjct: 219 NVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRG 278

Query: 449 PSQVT-IEGCVPRNVACGWWHTL 470
           P  V  I+G V + + CG +HTL
Sbjct: 279 PQLVERIDGLVSQ-IDCGSYHTL 300



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 91/186 (48%), Gaps = 13/186 (6%)

Query: 296 RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
           R PG  +   A G RHS ++     +L+ G    GQ G+        P  + +L  + ++
Sbjct: 19  RSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVD 78

Query: 356 GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL-PRLLDAPSLENVHSKSVSCG 414
            V+ G  H++ +   G V+A+G    GQLG G  +  +  P+ +   +L  +    VSCG
Sbjct: 79  LVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIT--TLNGIKIIQVSCG 136

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV------TIEGCVPRNVACGWWH 468
             H+  ++ D +VF WG N +GQLGLG    + +PSQ       ++EG     VA G  H
Sbjct: 137 HYHSLALSKDSQVFSWGKNSHGQLGLG----KEVPSQASPQRVRSLEGIPLAQVAAGGAH 192

Query: 469 TLLLAV 474
           +  L++
Sbjct: 193 SFALSL 198



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 102/232 (43%), Gaps = 37/232 (15%)

Query: 206 ENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSP 265
           + +S  P  +T   G++I  V+ G  H+LALS   QV+ WG    GQLGLG  +   +SP
Sbjct: 113 KEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASP 172

Query: 266 HPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFG 325
             +  +E                          G  +  +A GG HS  ++  G   +FG
Sbjct: 173 QRVRSLE--------------------------GIPLAQVAAGGAHSFALSLCGT--SFG 204

Query: 326 W-----GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
           W     G     G+        P  + +L  + +  ++ G  HT  +  DG V+ FG N 
Sbjct: 205 WGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNS 264

Query: 381 FGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
            GQLG      +  P+L++   ++ + S+ + CG+ HT A +   G+V  +G
Sbjct: 265 SGQLGYSPTPEKRGPQLVE--RIDGLVSQ-IDCGSYHTLAYVHTTGQVISFG 313


>gi|357147842|ref|XP_003574510.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
           distachyon]
          Length = 389

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/300 (29%), Positives = 129/300 (43%), Gaps = 40/300 (13%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGL-------GSRIRMVSS 264
           P  V    GV+I   A GG H LA+ D G+ + WG    GQ G        G+R      
Sbjct: 85  PAPVEALAGVKIVQAAIGGWHCLAVDDKGRAYAWGGNEYGQCGEEPERKEDGTRALRRDI 144

Query: 265 PHPIPCI------ESSYGKDRSAALSR-------------GSVNSEGPGFRVPG-NYVKG 304
           P P  C       + + G   S  L++             G +       RV G   V  
Sbjct: 145 PTPQRCALKLKVQQVAAGGTHSVVLTQEGHVWTWGQPWPPGDIKQISTPVRVQGLEKVMM 204

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           IA G  H+  +++   L  +G   YGQ G G T     P  V  L G+ +  +AAG WH+
Sbjct: 205 IAVGAFHNLALSEDAVLWAWGNNEYGQLGIGDTQPRSQPIRVEGLSGLSLVDIAAGGWHS 264

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
             ++ DG+VYA+G  + G+LG G D++  +   L    L+      VSCG  H+  +  D
Sbjct: 265 TALTKDGEVYAWGRGEHGRLGFGDDKSSHMVP-LKVQLLDGEDIVQVSCGGTHSVALTSD 323

Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRN------------VACGWWHTLLL 472
           G++F +G   +G+LG G  +    P +V +    P+             VACG  HTL +
Sbjct: 324 GRIFSYGRGDHGRLGYGRKVTTGHPMEVPLNLPPPKTSAGPDGLWQANFVACGGRHTLAI 383



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 116/285 (40%), Gaps = 81/285 (28%)

Query: 242 VWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNY 301
           V  WG G +GQLG+G             C E  +   R AAL   +V++           
Sbjct: 10  VLAWGSGEDGQLGMGG------------CDEKDWAH-RVAALDPYAVSA----------- 45

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ-GSTDDELSPNCVSSLLGIQIEGVAAG 360
              +  G R+S  I D G L T+GW   G  G    T  E SP  V +L G++I   A G
Sbjct: 46  ---VVAGSRNSLAICDDGRLFTWGWNQRGTLGHPPETKTESSPAPVEALAGVKIVQAAIG 102

Query: 361 LWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL--DAPSLE----NVHSKSVSCG 414
            WH + +   G  YA+GGN++GQ G   ++ E   R L  D P+ +     +  + V+ G
Sbjct: 103 GWHCLAVDDKGRAYAWGGNEYGQCGEEPERKEDGTRALRRDIPTPQRCALKLKVQQVAAG 162

Query: 415 ARHTAVIADDGKVFCWG--W---------------------------------------- 432
             H+ V+  +G V+ WG  W                                        
Sbjct: 163 GTHSVVLTQEGHVWTWGQPWPPGDIKQISTPVRVQGLEKVMMIAVGAFHNLALSEDAVLW 222

Query: 433 ----NKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
               N+YGQLG+GD   R+ P +V  + G    ++A G WH+  L
Sbjct: 223 AWGNNEYGQLGIGDTQPRSQPIRVEGLSGLSLVDIAAGGWHSTAL 267



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 102/381 (26%), Positives = 149/381 (39%), Gaps = 66/381 (17%)

Query: 57  AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEG 116
           ++AI D  +L TWG        +    K    P P        IV+AA G  HC+AV + 
Sbjct: 53  SLAICDDGRLFTWGWNQRGTLGHPPETKTESSPAPVEALAGVKIVQAAIGGWHCLAVDDK 112

Query: 117 GEVYTWGWKECVPSGRVFGDLSTGT-GLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSG 175
           G  Y WG  E    G        GT  L +D+   Q   L  +V    QV  ++GGT S 
Sbjct: 113 GRAYAWGGNEYGQCGEEPERKEDGTRALRRDIPTPQRCALKLKV---QQV--AAGGTHS- 166

Query: 176 TDGRGSGEEGSKRRRISLAKQT-----AESSSSGDENLSAFPCLVTLNPGVRIATVAAGG 230
                          + L ++       +    GD    + P  V +    ++  +A G 
Sbjct: 167 ---------------VVLTQEGHVWTWGQPWPPGDIKQISTP--VRVQGLEKVMMIAVGA 209

Query: 231 RHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNS 290
            H LALS+   +W WG    GQLG+G      + P   P                  +  
Sbjct: 210 FHNLALSEDAVLWAWGNNEYGQLGIGD-----TQPRSQP------------------IRV 246

Query: 291 EGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDELSPNCVSSL 349
           EG    + G  +  IA GG HS  +T  G +  +G G +G+ G G      + P  V  L
Sbjct: 247 EG----LSGLSLVDIAAGGWHSTALTKDGEVYAWGRGEHGRLGFGDDKSSHMVPLKVQLL 302

Query: 350 LGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD----QAETLPRLLDAPSLEN 405
            G  I  V+ G  H++ ++SDG ++++G    G+LG G          +P  L  P    
Sbjct: 303 DGEDIVQVSCGGTHSVALTSDGRIFSYGRGDHGRLGYGRKVTTGHPMEVPLNLPPPKTSA 362

Query: 406 -----VHSKSVSCGARHTAVI 421
                  +  V+CG RHT  I
Sbjct: 363 GPDGLWQANFVACGGRHTLAI 383



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 63/121 (52%), Gaps = 3/121 (2%)

Query: 320 ALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN 379
           A+L +G G  GQ G G  D++   + V++L    +  V AG  +++ I  DG ++ +G N
Sbjct: 9   AVLAWGSGEDGQLGMGGCDEKDWAHRVAALDPYAVSAVVAGSRNSLAICDDGRLFTWGWN 68

Query: 380 QFGQLGTGGD-QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           Q G LG   + + E+ P  ++A  L  V     + G  H   + D G+ + WG N+YGQ 
Sbjct: 69  QRGTLGHPPETKTESSPAPVEA--LAGVKIVQAAIGGWHCLAVDDKGRAYAWGGNEYGQC 126

Query: 439 G 439
           G
Sbjct: 127 G 127


>gi|330836304|ref|YP_004410945.1| hypothetical protein [Sphaerochaeta coccoides DSM 17374]
 gi|329748207|gb|AEC01563.1| Listeria/Bacterioides repeat-containing protein [Sphaerochaeta
           coccoides DSM 17374]
          Length = 786

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/262 (29%), Positives = 123/262 (46%), Gaps = 35/262 (13%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G  +A V+ G  HT+ L   G +W  G   +GQLGLG               +SS G DR
Sbjct: 516 GSDVAAVSTGASHTMILKKNGTLWATGQNNDGQLGLG---------------DSSSGTDR 560

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDD 339
           S  +   ++ S+          V+ ++ G  H+ ++   G L   G    GQ G G+T  
Sbjct: 561 STPVQVLAMGSD----------VEAVSAGSYHTMILKKDGTLWATGRNYDGQLGDGTTTS 610

Query: 340 ELSPNCVSSL-----LGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGG----DQ 390
             +P  V +          ++ V+AG +HT+ +  DG ++  G NQ+GQLG G     + 
Sbjct: 611 RTTPVQVKASPTFGDFMTNVKAVSAGGFHTMILKKDGTLWVTGRNQYGQLGDGTSGITNN 670

Query: 391 AETLPRLLDAPSLENVHSK-SVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIP 449
             T  ++ D+  +  +    +VS G  +T ++  DG ++  G N +GQLG+G+  DR  P
Sbjct: 671 KSTPVQVRDSSGVGFMTDVVAVSAGLHYTIILKKDGTLWATGRNNFGQLGVGNKTDRKTP 730

Query: 450 SQVTIEGCVPRNVACGWWHTLL 471
            +V   G     V+ G+ HTL+
Sbjct: 731 VKVAFMGTDVAAVSAGYNHTLI 752



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 91/179 (50%), Gaps = 14/179 (7%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           +K ++ G  H+ ++   G L   G    GQ G G   D  +P  VSS+ G  +  V+AG 
Sbjct: 414 IKSVSAGYYHTMILKTDGTLWATGENKAGQLGVGDNTDRSTPVQVSSM-GSDVAAVSAGE 472

Query: 362 WHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHS-----KSVSCGAR 416
            HT+ +  DG ++A G N++GQLG G   +      +D  +   V S      +VS GA 
Sbjct: 473 KHTMILKKDGTLWATGENKYGQLGLGDSDSG-----IDKSTPMQVSSMGSDVAAVSTGAS 527

Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDV---IDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           HT ++  +G ++  G N  GQLGLGD     DR+ P QV   G     V+ G +HT++L
Sbjct: 528 HTMILKKNGTLWATGQNNDGQLGLGDSSSGTDRSTPVQVLAMGSDVEAVSAGSYHTMIL 586


>gi|78190492|ref|NP_001030025.1| X-linked retinitis pigmentosa GTPase regulator isoform C [Homo
           sapiens]
          Length = 1152

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 98/303 (32%), Positives = 143/303 (47%), Gaps = 45/303 (14%)

Query: 208 LSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR--------I 259
           +S   C+  L P  ++   A G  HTL  ++ G V+  G   EGQLGLG          I
Sbjct: 75  ISKPTCVKALKPE-KVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVI 133

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSV------NSEG------------PGFRVPGNY 301
              +S H I  +  S G + SAAL+          NSEG            P     G  
Sbjct: 134 SFFTSEHKIKQL--SAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKP 191

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST--DDELSPNCVSSLLGIQIEGVAA 359
           V  I+CG  HSA +T  G L  FG    G+ G  +    +  +P  VS +    I+ VA 
Sbjct: 192 VSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVIQ-VAC 250

Query: 360 GLWHTICISSDGDVYAFGGNQFGQLGTGGDQAET-LPRLLDAPSLENVHSKS---VSCGA 415
           G  HT+ ++ +  VY FG  QFGQLG G    ET  P++     +EN+  ++   +SCG 
Sbjct: 251 GGEHTVVLTENA-VYTFGLGQFGQLGLGTFLFETSEPKV-----IENIRDQTISYISCGE 304

Query: 416 RHTAVIADDGKVFCWGWNKYGQLGLG--DVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
            HTA+I D G ++ +G  ++G+LGLG  +  +  IP+  +     + + VACG  H ++ 
Sbjct: 305 NHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVF 364

Query: 473 AVP 475
           A P
Sbjct: 365 AAP 367



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 60/170 (35%), Positives = 93/170 (54%), Gaps = 2/170 (1%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           ++CG  HSAV+T    L  FG   +GQ G GS      P CV +L   +++  A G  HT
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHT 99

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           +  +  G+VYA GGN  GQLG G  +      ++   + E+   K +S G+  +A + +D
Sbjct: 100 LVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEH-KIKQLSAGSNTSAALTED 158

Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAV 474
           G++F WG N  GQ+GL +V +  +P QVTI   V   ++CG++H+  +  
Sbjct: 159 GRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSW-ISCGYYHSAFVTT 207



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/279 (23%), Positives = 126/279 (45%), Gaps = 38/279 (13%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIE------SSYGKDR 279
           ++ G  H+  ++   +++ +G    GQLGLGS+   +S P  +  ++      ++ G++ 
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSK-SAISKPTCVKALKPEKVKLAACGRNH 98

Query: 280 SAALSRGSV------NSEGP---------------GFRVPGNYVKGIACGGRHSAVITDA 318
           +   + G        N+EG                 F    + +K ++ G   SA +T+ 
Sbjct: 99  TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTED 158

Query: 319 GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           G L  +G    GQ G  +  +   P  V+  +G  +  ++ G +H+  +++DG++Y FG 
Sbjct: 159 GRLFMWGDNSEGQIGLKNVSNVCVPQQVT--IGKPVSWISCGYYHSAFVTTDGELYVFGE 216

Query: 379 NQFGQLGTGGDQ--AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYG 436
            + G+LG           P+L+     + +    V+CG  HT V+ ++  V+ +G  ++G
Sbjct: 217 PENGKLGLPNQLLGNHRTPQLVSEIPEKVIQ---VACGGEHTVVLTENA-VYTFGLGQFG 272

Query: 437 QLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLA 473
           QLGLG  +      +V   I       ++CG  HT L+ 
Sbjct: 273 QLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALIT 311



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 90/330 (27%), Positives = 142/330 (43%), Gaps = 66/330 (20%)

Query: 103 AAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPR 162
           AA G  H +  TEGG VY  G       G   G L  G   +++ F   S F +E     
Sbjct: 92  AACGRNHTLVSTEGGNVYATG-------GNNEGQLGLGDTEERNTFHVISFFTSEH--KI 142

Query: 163 SQVSRSSGGTSSGT-DGR----GSGEEGSKRRRISLAKQTAESSSSGDENLS--AFPCLV 215
            Q+S  S  +++ T DGR    G   EG    +I L            +N+S    P  V
Sbjct: 143 KQLSAGSNTSAALTEDGRLFMWGDNSEG----QIGL------------KNVSNVCVPQQV 186

Query: 216 TLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSY 275
           T+  G  ++ ++ G  H+  ++  G+++ +G    G+LGL +++                
Sbjct: 187 TI--GKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQL---------------L 229

Query: 276 GKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG 335
           G  R+  L             +P   ++ +ACGG H+ V+T+  A+ TFG G +GQ G G
Sbjct: 230 GNHRTPQLVS----------EIPEKVIQ-VACGGEHTVVLTE-NAVYTFGLGQFGQLGLG 277

Query: 336 STDDELS-PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAET- 393
           +   E S P  + ++    I  ++ G  HT  I+  G +Y FG  + G+LG G +     
Sbjct: 278 TFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNH 337

Query: 394 -LPRLLDAPSLENVHSKSVSCGARHTAVIA 422
            +P L    +      K V+CG  H  V A
Sbjct: 338 FIPTL--CSNFLRFIVKLVACGGCHMVVFA 365


>gi|327288514|ref|XP_003228971.1| PREDICTED: RCC1 domain-containing protein 1-like [Anolis
           carolinensis]
          Length = 266

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/226 (30%), Positives = 103/226 (45%), Gaps = 37/226 (16%)

Query: 286 GSVNSEGPGFR-VPGNY-VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
           G V    P F  +P +   + +  G  H  ++ +AG L ++G G +GQ G G  +D   P
Sbjct: 30  GFVTPRPPFFHPLPASLCARRLVLGHEHMLLLDEAGTLFSWGSGRHGQLGHGDLEDRPEP 89

Query: 344 NCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT----------------- 386
             V +L G+ ++ VAAG WH+  +S  GD+Y +G N+ GQLG                  
Sbjct: 90  QAVEALQGVALKEVAAGGWHSATVSEAGDLYLWGWNESGQLGLPSKAASESQGAARDTDG 149

Query: 387 GGDQA-------------ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWN 433
            GD+A             +  P LL  P      +    CG+RHTA +   G+++ WGW 
Sbjct: 150 AGDRAQPQGPPGADFISIQAFPALLHLP--RGAEALKAGCGSRHTAAVTRTGELYTWGWG 207

Query: 434 KYGQLGLGDVIDRNIPSQVTI---EGCVPRNVACGWWHTLLLAVPP 476
           +YGQLG GD    + P +V      G    +V CG W T +    P
Sbjct: 208 QYGQLGHGDTASSDRPRRVNHFVERGLSVVDVTCGLWATFVQVRKP 253



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 73/179 (40%), Gaps = 27/179 (15%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
           GD      P  V    GV +  VAAGG H+  +S+ G ++ WG+   GQLGL S+     
Sbjct: 81  GDLEDRPEPQAVEALQGVALKEVAAGGWHSATVSEAGDLYLWGWNESGQLGLPSK----- 135

Query: 264 SPHPIPCIESSYGKDRSAALSRGSVNSEGPG-------------FRVP-GNYVKGIACGG 309
                     S G  R    +      +GP                +P G       CG 
Sbjct: 136 ------AASESQGAARDTDGAGDRAQPQGPPGADFISIQAFPALLHLPRGAEALKAGCGS 189

Query: 310 RHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLL--GIQIEGVAAGLWHTIC 366
           RH+A +T  G L T+GWG YGQ G G T     P  V+  +  G+ +  V  GLW T  
Sbjct: 190 RHTAAVTRTGELYTWGWGQYGQLGHGDTASSDRPRRVNHFVERGLSVVDVTCGLWATFV 248



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 92/245 (37%), Gaps = 69/245 (28%)

Query: 22  GALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVT 81
           G +  R P   PL   L      A R V G      + + ++  L +WGS          
Sbjct: 30  GFVTPRPPFFHPLPASL-----CARRLVLG--HEHMLLLDEAGTLFSWGS---------- 72

Query: 82  SGKHGEI------PEPFPLPTEA----SIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSG 131
            G+HG++        P P   EA    ++ + AAG  H   V+E G++Y WGW E     
Sbjct: 73  -GRHGQLGHGDLEDRPEPQAVEALQGVALKEVAAGGWHSATVSEAGDLYLWGWNE----- 126

Query: 132 RVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRI 191
                                   + Q+   S+ +  S G +  TDG G           
Sbjct: 127 ------------------------SGQLGLPSKAASESQGAARDTDGAGD---------- 152

Query: 192 SLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEG 251
               Q      +   ++ AFP L+ L  G        G RHT A++  G+++ WG+G  G
Sbjct: 153 --RAQPQGPPGADFISIQAFPALLHLPRGAEALKAGCGSRHTAAVTRTGELYTWGWGQYG 210

Query: 252 QLGLG 256
           QLG G
Sbjct: 211 QLGHG 215



 Score = 40.0 bits (92), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 7/73 (9%)

Query: 88  IPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDV 147
            P    LP  A  +KA  G  H  AVT  GE+YTWGW +       +G L  G     D 
Sbjct: 170 FPALLHLPRGAEALKAGCGSRHTAAVTRTGELYTWGWGQ-------YGQLGHGDTASSDR 222

Query: 148 FERQSSFLTEQVS 160
             R + F+   +S
Sbjct: 223 PRRVNHFVERGLS 235


>gi|326671858|ref|XP_685964.5| PREDICTED: hypothetical protein LOC557752 [Danio rerio]
          Length = 1413

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 96/302 (31%), Positives = 140/302 (46%), Gaps = 46/302 (15%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS--------RIRMVS 263
           P  V      R+   A G  HTL  +  G ++  G   EGQLGLG          +   +
Sbjct: 79  PTCVKALKSERVKLTACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFN 138

Query: 264 SPHPIPCIESSYGKDRSAALSRGSV------NSEG------------PGFRVPGNYVKGI 305
              PI  +  + G + SAAL++         NSEG            P     G  V  +
Sbjct: 139 KQGPIKML--AAGSNTSAALTQDGRLYMWGDNSEGQIGLGKESNALTPQEVSVGKRVFWV 196

Query: 306 ACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD--DELSPNCVSSLLGIQIEGVAAGLWH 363
           +CG  HSA +T  GAL TFG    G+ G  +    +   P  V+ +    ++ VA G  H
Sbjct: 197 SCGYYHSAFVTVDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPDRVVQ-VACGGGH 255

Query: 364 TICISSDGDVYAFGGNQFGQLGTGGDQAET-LPRLLDAPSLENVHSKSVSCGARHTAVIA 422
           T+ ++ + +VY+FG  QFGQLG G    E+ LPR+++         K  +CG  HTA+I 
Sbjct: 256 TVALT-ENEVYSFGLGQFGQLGHGTFIFESRLPRVVE--HFRKGRVKHAACGENHTALIT 312

Query: 423 DDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPR-------NVACGWWHTLLLAVP 475
           D+G ++ +G  ++G+LGLG   + N  +Q     C PR       +V CG  H L+LA P
Sbjct: 313 DNGLLYTFGDGRHGKLGLG---EENFTNQFKPTLC-PRFLDYHVHSVTCGGCHMLVLAKP 368

Query: 476 PT 477
            T
Sbjct: 369 RT 370



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 57/170 (33%), Positives = 94/170 (55%), Gaps = 2/170 (1%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           I+CG  H+A++T+ G L  FG   +GQ G G+      P CV +L   +++  A G  HT
Sbjct: 41  ISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALKSERVKLTACGRTHT 100

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           +  +S G++YA GGN  GQLG G     T   L++  + +    K ++ G+  +A +  D
Sbjct: 101 LVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGP-IKMLAAGSNTSAALTQD 159

Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAV 474
           G+++ WG N  GQ+GLG   +   P +V++ G     V+CG++H+  + V
Sbjct: 160 GRLYMWGDNSEGQIGLGKESNALTPQEVSV-GKRVFWVSCGYYHSAFVTV 208



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 55/110 (50%), Gaps = 19/110 (17%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPS---LENVHSKSVSCGARHTAVIAD 423
           I   G V+ FG ++F                 +APS   L+N     +SCG  HTA++ +
Sbjct: 9   IPESGAVFTFGKSKFAD---------------NAPSKFWLKNDVPLRISCGDEHTALVTE 53

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
           +GK+F +G N +GQLGLG     N P+ V  ++    +  ACG  HTL+ 
Sbjct: 54  NGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALKSERVKLTACGRTHTLVF 103


>gi|348529614|ref|XP_003452308.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Oreochromis
           niloticus]
          Length = 1004

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 85/226 (37%), Positives = 106/226 (46%), Gaps = 29/226 (12%)

Query: 206 ENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSP 265
           E     P LV      RI+ V  G +H +ALS  GQ++ WG    GQLGLG        P
Sbjct: 121 ETTVRIPRLVKRLCDHRISQVMCGNQHCVALSRDGQLFTWGQNTSGQLGLGKGEPSKLFP 180

Query: 266 HP------IPCIESSYGKDRSAALS-RGSVN------------SEGPGFRVP-------G 299
           HP      IP  + + G D S ALS  G+V             ++     VP        
Sbjct: 181 HPLKSLAGIPLAQITAGGDHSFALSLSGAVFGWGKNRAGQLGLNDKQDRAVPCHIKFLRS 240

Query: 300 NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAA 359
             V  I+CG  H+A +T  G L TFG G +GQ G GST+ EL P  V  L+G ++  +A 
Sbjct: 241 QKVVYISCGDEHTAALTKDGGLFTFGDGSWGQLGHGSTNSELLPRRVLELMGTEVSQIAC 300

Query: 360 GLWHTIC-ISSDGDVYAFGGNQFGQLGTG--GDQAETLPRLLDAPS 402
           G  HT+  + S G VYAFG N  GQLGTG  GD     P     PS
Sbjct: 301 GRHHTLAFVPSSGVVYAFGCNSHGQLGTGILGDARSPFPVKTSVPS 346



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 116/251 (46%), Gaps = 30/251 (11%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
           +I  V+ G  H++A+++ GQ++ WG G  GQLGLG+    V  P  +             
Sbjct: 84  KITMVSCGRGHSMAVNEQGQLFAWGAGDGGQLGLGTTETTVRIPRLVK------------ 131

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD-DE 340
                         R+  + +  + CG +H   ++  G L T+G    GQ G G  +  +
Sbjct: 132 --------------RLCDHRISQVMCGNQHCVALSRDGQLFTWGQNTSGQLGLGKGEPSK 177

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
           L P+ + SL GI +  + AG  H+  +S  G V+ +G N+ GQLG    Q   +P     
Sbjct: 178 LFPHPLKSLAGIPLAQITAGGDHSFALSLSGAVFGWGKNRAGQLGLNDKQDRAVP--CHI 235

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVP 459
             L +     +SCG  HTA +  DG +F +G   +GQLG G      +P +V  + G   
Sbjct: 236 KFLRSQKVVYISCGDEHTAALTKDGGLFTFGDGSWGQLGHGSTNSELLPRRVLELMGTEV 295

Query: 460 RNVACGWWHTL 470
             +ACG  HTL
Sbjct: 296 SQIACGRHHTL 306



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 113/250 (45%), Gaps = 34/250 (13%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  V  GG+H++ L   G V+  G    GQLG     +   SP  +              
Sbjct: 35  LKEVGCGGQHSVFLMHDGSVYTCGSNSCGQLG---HDKAGISPEVV-------------- 77

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
              G+++++          +  ++CG  HS  + + G L  +G G  GQ G G+T+  + 
Sbjct: 78  ---GALDTQK---------ITMVSCGRGHSMAVNEQGQLFAWGAGDGGQLGLGTTETTVR 125

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG-GDQAETLPRLLDA 400
            P  V  L   +I  V  G  H + +S DG ++ +G N  GQLG G G+ ++  P  L  
Sbjct: 126 IPRLVKRLCDHRISQVMCGNQHCVALSRDGQLFTWGQNTSGQLGLGKGEPSKLFPHPLK- 184

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVP 459
            SL  +    ++ G  H+  ++  G VF WG N+ GQLGL D  DR +P  +  +     
Sbjct: 185 -SLAGIPLAQITAGGDHSFALSLSGAVFGWGKNRAGQLGLNDKQDRAVPCHIKFLRSQKV 243

Query: 460 RNVACGWWHT 469
             ++CG  HT
Sbjct: 244 VYISCGDEHT 253



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 77/300 (25%), Positives = 113/300 (37%), Gaps = 52/300 (17%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
           G G +MA+++  +L  WG+ D       T+     IP       +  I +   G  HCVA
Sbjct: 91  GRGHSMAVNEQGQLFAWGAGDGGQLGLGTTETTVRIPRLVKRLCDHRISQVMCGNQHCVA 150

Query: 113 VTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGT 172
           ++  G+++TWG           G L  G G    +F      L     P +Q++  +GG 
Sbjct: 151 LSRDGQLFTWGQNTS-------GQLGLGKGEPSKLFPHPLKSLAG--IPLAQIT--AGGD 199

Query: 173 SSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRH 232
            S          G  + R       A      D+   A PC +      ++  ++ G  H
Sbjct: 200 HSFALSLSGAVFGWGKNR-------AGQLGLNDKQDRAVPCHIKFLRSQKVVYISCGDEH 252

Query: 233 TLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEG 292
           T AL+  G ++ +G G  GQLG                               GS NSE 
Sbjct: 253 TAALTKDGGLFTFGDGSWGQLG------------------------------HGSTNSEL 282

Query: 293 PGFRV---PGNYVKGIACGGRHS-AVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS 348
              RV    G  V  IACG  H+ A +  +G +  FG   +GQ G G   D  SP  V +
Sbjct: 283 LPRRVLELMGTEVSQIACGRHHTLAFVPSSGVVYAFGCNSHGQLGTGILGDARSPFPVKT 342


>gi|158257096|dbj|BAF84521.1| unnamed protein product [Homo sapiens]
          Length = 815

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 141/298 (47%), Gaps = 45/298 (15%)

Query: 213 CLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR--------IRMVSS 264
           C+  L P  ++   A G  HTL  ++ G V+  G   EGQLGLG          I   +S
Sbjct: 80  CVKALKPE-KVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTS 138

Query: 265 PHPIPCIESSYGKDRSAALSRGSV------NSEG------------PGFRVPGNYVKGIA 306
            H I  +  S G + SAAL+          NSEG            P     G  V  I+
Sbjct: 139 EHKIKQL--SAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWIS 196

Query: 307 CGGRHSAVITDAGALLTFGWGLYGQCGQGST--DDELSPNCVSSLLGIQIEGVAAGLWHT 364
           CG  HSA +T  G L  FG    G+ G  +    +  +P  VS +    I+ VA G  HT
Sbjct: 197 CGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVIQ-VACGGEHT 255

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAET-LPRLLDAPSLENVHSKSVS---CGARHTAV 420
           + ++ +  VY FG  QFGQLG G    ET  P+++     EN+  +++S   CG  HTA+
Sbjct: 256 VVLTENA-VYTFGLGQFGQLGLGTFLFETSEPKVI-----ENIRDQTISYISCGENHTAL 309

Query: 421 IADDGKVFCWGWNKYGQLGLG--DVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLAVP 475
           I D G ++ +G  ++G+LGLG  +  +  IP+  +     + + VACG  H ++ A P
Sbjct: 310 ITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVFAAP 367



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/170 (35%), Positives = 93/170 (54%), Gaps = 2/170 (1%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           ++CG  HSAV+T    L  FG   +GQ G GS      P CV +L   +++  A G  HT
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHT 99

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           +  +  G+VYA GGN  GQLG G  +      ++   + E+   K +S G+  +A + +D
Sbjct: 100 LVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEH-KIKQLSAGSNTSAALTED 158

Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAV 474
           G++F WG N  GQ+GL +V +  +P QVTI   V   ++CG++H+  +  
Sbjct: 159 GRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSW-ISCGYYHSAFVTT 207



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/279 (23%), Positives = 126/279 (45%), Gaps = 38/279 (13%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIE------SSYGKDR 279
           ++ G  H+  ++   +++ +G    GQLGLGS+   VS P  +  ++      ++ G++ 
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSK-SAVSKPTCVKALKPEKVKLAACGRNH 98

Query: 280 SAALSRGSV------NSEGP---------------GFRVPGNYVKGIACGGRHSAVITDA 318
           +   + G        N+EG                 F    + +K ++ G   SA +T+ 
Sbjct: 99  TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTED 158

Query: 319 GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           G L  +G    GQ G  +  +   P  V+  +G  +  ++ G +H+  +++DG++Y FG 
Sbjct: 159 GRLFMWGDNSEGQIGLKNVSNVCVPQQVT--IGKPVSWISCGYYHSAFVTTDGELYVFGE 216

Query: 379 NQFGQLGTGGDQ--AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYG 436
            + G+LG           P+L+     + +    V+CG  HT V+ ++  V+ +G  ++G
Sbjct: 217 PENGKLGLPNQLLGNHRTPQLVSEIPEKVIQ---VACGGEHTVVLTENA-VYTFGLGQFG 272

Query: 437 QLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLA 473
           QLGLG  +      +V   I       ++CG  HT L+ 
Sbjct: 273 QLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALIT 311



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 89/330 (26%), Positives = 140/330 (42%), Gaps = 66/330 (20%)

Query: 103 AAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPR 162
           AA G  H +  TEGG VY  G       G   G L  G   +++ F   S F +E     
Sbjct: 92  AACGRNHTLVSTEGGNVYATG-------GNNEGQLGLGDTEERNTFHVISFFTSEH--KI 142

Query: 163 SQVSRSSGGTSSGT-DGR----GSGEEGSKRRRISLAKQTAESSSSGDENLS--AFPCLV 215
            Q+S  S  +++ T DGR    G   EG                  G +N+S    P  V
Sbjct: 143 KQLSAGSNTSAALTEDGRLFMWGDNSEG----------------QIGLKNVSNVCVPQQV 186

Query: 216 TLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSY 275
           T+  G  ++ ++ G  H+  ++  G+++ +G    G+LGL +++                
Sbjct: 187 TI--GKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQL---------------L 229

Query: 276 GKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG 335
           G  R+  L             +P   ++ +ACGG H+ V+T+  A+ TFG G +GQ G G
Sbjct: 230 GNHRTPQLVS----------EIPEKVIQ-VACGGEHTVVLTE-NAVYTFGLGQFGQLGLG 277

Query: 336 STDDELS-PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAET- 393
           +   E S P  + ++    I  ++ G  HT  I+  G +Y FG  + G+LG G +     
Sbjct: 278 TFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNH 337

Query: 394 -LPRLLDAPSLENVHSKSVSCGARHTAVIA 422
            +P L    +      K V+CG  H  V A
Sbjct: 338 FIPTL--CSNFLRFIVKLVACGGCHMVVFA 365


>gi|395770833|ref|ZP_10451348.1| hypothetical protein Saci8_13710 [Streptomyces acidiscabies 84-104]
          Length = 393

 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 91/274 (33%), Positives = 124/274 (45%), Gaps = 37/274 (13%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI----ESSYG 276
             +  +AAGG+H LAL   GQV+ WG    GQLG        + P  +  +    + S G
Sbjct: 117 TNVKDIAAGGKHALALDTSGQVYSWGDNSYGQLGNNRTGDSRTVPDRVQGMPKAKQISAG 176

Query: 277 KDRSAAL---------SRGSVNSEGPGFRVPGNY---------VKGIACGGRHSAVITDA 318
            D S AL          RG     G G R   +          +  I  G  H+  IT  
Sbjct: 177 CDFSLALLENGKVYAWGRGIHGQLGTGNRATSSVPRQVTGLEDIVKIDAGCYHALAITAD 236

Query: 319 GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
             + ++G+ LYGQ G  +T     P  V  L    +  + AG WH   ++SD  VY +G 
Sbjct: 237 NTVKSWGYNLYGQLGNSATKSSTVPVDVDWL--TDVSDIEAGAWHNYAMTSDSHVYGWGN 294

Query: 379 NQFGQLGTGGDQA--ETLPRL-----LDAPSLENVHSKSVSCGARH-TAVIADDGKVFCW 430
           NQ+GQL   GDQA  + + R      ++ P LE V  + ++ GARH  AV ADD  VF W
Sbjct: 295 NQYGQL-LEGDQADGDNISRTNRTAPVEIPRLEGV--QHLAAGARHGVAVTADD--VFTW 349

Query: 431 GWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVAC 464
           G N  GQLG G  + R    ++  EG   +NV  
Sbjct: 350 GNNSEGQLGNGTTVSRFDSVKILQEGSAIKNVTA 383



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 102/239 (42%), Gaps = 35/239 (14%)

Query: 242 VWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNY 301
           V  WG G  GQLG G+   +  S  P              +L RG V+    G       
Sbjct: 32  VLSWGAGRTGQLGNGT---LSDSLSPASVT----------SLFRGDVDQMSAG------- 71

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
             G +     +   TD   +  +G    GQ G G   ++  P  V  L    ++ +AAG 
Sbjct: 72  --GTSSADSFTLARTDK-TVKAWGHNSAGQLGNGGNTNQAVPTTVPRL--TNVKDIAAGG 126

Query: 362 WHTICISSDGDVYAFGGNQFGQLGTG--GDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            H + + + G VY++G N +GQLG    GD      R+   P      +K +S G   + 
Sbjct: 127 KHALALDTSGQVYSWGDNSYGQLGNNRTGDSRTVPDRVQGMPK-----AKQISAGCDFSL 181

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLAVPPT 477
            + ++GKV+ WG   +GQLG G+    ++P QVT +E  V  +  C  +H L +    T
Sbjct: 182 ALLENGKVYAWGRGIHGQLGTGNRATSSVPRQVTGLEDIVKIDAGC--YHALAITADNT 238


>gi|431898775|gb|ELK07147.1| X-linked retinitis pigmentosa GTPase regulator [Pteropus alecto]
          Length = 1019

 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 101/296 (34%), Positives = 148/296 (50%), Gaps = 41/296 (13%)

Query: 213 CLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIE 272
           C+  L P  ++   A G  HTL L++ G+V+  G   EGQLGLG      ++ HPI    
Sbjct: 125 CVKALKPE-KVKFAACGRNHTLVLTEEGKVYAAGGNNEGQLGLGD-TEDRNTFHPICFFT 182

Query: 273 SSY-------GKDRSAALS-RGSV-----NSEG-------PGFRVPGNYVKG-----IAC 307
           S +       G + SAAL+  G++     NSEG       P   VP     G     I+C
Sbjct: 183 SQHQLKQLSAGSNTSAALTVDGNLFMWGDNSEGQIGLKNVPNVCVPHQVTVGKPIAWISC 242

Query: 308 GGRHSAVITDAGALLTFGWGLYGQCGQ-GSTDDELSPNCVSSLL-GI--QIEGVAAGLWH 363
           G  HSA +T  G L TFG     +CG+ G     L  + V  L+ GI  ++  VA G  H
Sbjct: 243 GYYHSAFVTMEGELYTFGET---ECGKLGLPRQLLMNHKVPQLVPGIPEKVIQVACGGGH 299

Query: 364 TICISSDGDVYAFGGNQFGQLGTGGDQAETL-PRLLDAPSLENVHSKSVSCGARHTAVIA 422
           T+ ++    VY FG  QFGQLG G    ET  P++L+   +++     +SCG  HTA+I 
Sbjct: 300 TVVLTEKA-VYTFGLGQFGQLGLGTFIFETAEPKILEP--IKDQKIIYISCGENHTALIT 356

Query: 423 DDGKVFCWGWNKYGQLGLG--DVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLAVP 475
           D G ++ +G  ++G+LGLG  +  ++ IP+  +     +   VACG  H ++ A P
Sbjct: 357 DVGLMYTFGDGRHGKLGLGMENFTNQFIPTLCSNFLRFMVELVACGGCHMIVFATP 412



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 60/171 (35%), Positives = 92/171 (53%), Gaps = 4/171 (2%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           +ACG  H+A+IT    L  FG   +GQ G GS      P CV +L   +++  A G  HT
Sbjct: 85  LACGDEHTAIITGNNKLYMFGSNNWGQLGLGSRSTVSKPTCVKALKPEKVKFAACGRNHT 144

Query: 365 ICISSDGDVYAFGGNQFGQLGTGG-DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
           + ++ +G VYA GGN  GQLG G  +   T   +    S   +  K +S G+  +A +  
Sbjct: 145 LVLTEEGKVYAAGGNNEGQLGLGDTEDRNTFHPICFFTSQHQL--KQLSAGSNTSAALTV 202

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAV 474
           DG +F WG N  GQ+GL +V +  +P QVT+ G     ++CG++H+  + +
Sbjct: 203 DGNLFMWGDNSEGQIGLKNVPNVCVPHQVTV-GKPIAWISCGYYHSAFVTM 252



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 87/329 (26%), Positives = 135/329 (41%), Gaps = 64/329 (19%)

Query: 103 AAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPR 162
           AA G  H + +TE G+VY  G       G   G L  G   D++ F     F T Q   +
Sbjct: 137 AACGRNHTLVLTEEGKVYAAG-------GNNEGQLGLGDTEDRNTF-HPICFFTSQHQLK 188

Query: 163 SQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLN 218
              + S+   +   DG     G   EG    +I L                  P  VT+ 
Sbjct: 189 QLSAGSNTSAALTVDGNLFMWGDNSEG----QIGLKNVPN----------VCVPHQVTV- 233

Query: 219 PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
            G  IA ++ G  H+  ++  G+++ +G    G+LGL  ++ M    H +P +       
Sbjct: 234 -GKPIAWISCGYYHSAFVTMEGELYTFGETECGKLGLPRQLLMN---HKVPQL------- 282

Query: 279 RSAALSRGSVNSEGPGFRVPG--NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGS 336
                             VPG    V  +ACGG H+ V+T+  A+ TFG G +GQ G G+
Sbjct: 283 ------------------VPGIPEKVIQVACGGGHTVVLTEK-AVYTFGLGQFGQLGLGT 323

Query: 337 TDDELS-PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ--AET 393
              E + P  +  +   +I  ++ G  HT  I+  G +Y FG  + G+LG G +    + 
Sbjct: 324 FIFETAEPKILEPIKDQKIIYISCGENHTALITDVGLMYTFGDGRHGKLGLGMENFTNQF 383

Query: 394 LPRLLDAPSLENVHSKSVSCGARHTAVIA 422
           +P L    +      + V+CG  H  V A
Sbjct: 384 IPTL--CSNFLRFMVELVACGGCHMIVFA 410


>gi|383453816|ref|YP_005367805.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
 gi|380728295|gb|AFE04297.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
          Length = 748

 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 86/277 (31%), Positives = 139/277 (50%), Gaps = 30/277 (10%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG---LGSRI--RMVSSPHPIPCIES--- 273
           ++ +VAAG +++LAL   G VW WG    GQLG   L SR+  + VS+   +  + S   
Sbjct: 101 QVTSVAAGDQYSLALDADGAVWAWGDNASGQLGDGTLTSRLLPQRVSALSNVVSLASGFA 160

Query: 274 ------------SYGKDRSAALSRGSVNSEGPGFRVPG-NYVKGIACGGRHSAVITDAGA 320
                       ++G +R+  L  G++       +VPG + V  +  GG  S  +   G 
Sbjct: 161 HVLALRADGTVWAWGDNRNNQLGDGTLTRSSVPLQVPGLSGVVAVVAGGSSSLALRADGT 220

Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
           L  +G   YGQ G G+T   ++P  V+SL    +  V+ G +H + + +DG V+A+G N 
Sbjct: 221 LWAWGDNRYGQLGDGTTVRRITPVQVASL--DSVVSVSVGAYHALALRADGTVWAWGHNA 278

Query: 381 FGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL 440
           +GQLG G +   T P    + SL +V  +++  G  H+  +  DG V+ WG N+Y QLG 
Sbjct: 279 YGQLGDGTNTQRTQPV---SVSLTDV--RTLVAGNYHSLAVRTDGAVWAWGDNRYRQLGT 333

Query: 441 GDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAVPPT 477
           G++    +P Q  + G V   +  G+ H++ L    T
Sbjct: 334 GNLTSSPLPLQAGMTGGV--TLVAGYRHSVALGADGT 368



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/263 (31%), Positives = 126/263 (47%), Gaps = 26/263 (9%)

Query: 229 GGRHTLALSDIGQVWGWGYGGEGQLGLGS---------------RIRMVSSPHPIPCIES 273
           G  H LAL   G VW WG+   GQLG G+               R  +  + H +     
Sbjct: 258 GAYHALALRADGTVWAWGHNAYGQLGDGTNTQRTQPVSVSLTDVRTLVAGNYHSLAVRTD 317

Query: 274 ----SYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
               ++G +R   L  G++ S     +        +  G RHS  +   G   ++G  ++
Sbjct: 318 GAVWAWGDNRYRQLGTGNLTSSPLPLQAGMTGGVTLVAGYRHSVALGADGTAWSWGDNVF 377

Query: 330 GQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD 389
           GQ G  + +  ++P  VS L   + +  +  L HT+ + ++G ++A+G NQ GQLG G  
Sbjct: 378 GQLGDTTFEPRMAPVQVSGLALGRADATSGQL-HTVMLGANGRLWAWGDNQQGQLGNGTQ 436

Query: 390 QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIP 449
           Q  +LP  ++   L +V   SV+ G RHTA +  DG V+ WG N++GQLG G V DR  P
Sbjct: 437 QDSSLPLPVN---LTDV--ISVASGYRHTAALRSDGTVWTWGMNRFGQLGEGTVTDRPTP 491

Query: 450 SQVTIEGCVPRNVACGWWHTLLL 472
            QV   G V   +A G  H+L L
Sbjct: 492 VQVVGLGGVTA-IATGDNHSLAL 513



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 112/395 (28%), Positives = 164/395 (41%), Gaps = 76/395 (19%)

Query: 65  KLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGW 124
           +L  WG   D  Q  + +G   +   P P+     ++  A+G+ H  A+   G V+TWG 
Sbjct: 419 RLWAWG---DNQQGQLGNGTQQDSSLPLPV-NLTDVISVASGYRHTAALRSDGTVWTWGM 474

Query: 125 KECVPSGRVFGDLSTGTGLDK----DVFERQSSFLTEQVSPRSQVSRSSGGTSS-GTDGR 179
                    FG L  GT  D+     V               S   RS+G   + G +  
Sbjct: 475 NR-------FGQLGEGTVTDRPTPVQVVGLGGVTAIATGDNHSLALRSNGTVWAWGFNRY 527

Query: 180 GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDI 239
           G   +G+   R    +Q  ++S   +                 I  +AAGG H+LAL   
Sbjct: 528 GQLGDGTAVDR----RQPVQASGLSN-----------------IVAIAAGGSHSLALRSD 566

Query: 240 GQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPG 299
           G VW +GY  +GQLG G+R   +    P+  +  S                         
Sbjct: 567 GTVWAFGYNFDGQLGNGTRTWTLV---PVQAVGLSS------------------------ 599

Query: 300 NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAA 359
             V  +A G  +S  +   G +  +G+   GQ G G+T     P  V  L GI    +AA
Sbjct: 600 --VVSLAAGSLYSLALRADGTVWAWGYNASGQLGVGTTQGSAQPLQVPGLSGI--TSIAA 655

Query: 360 GLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVS--CGARH 417
           G +H++ + SDG V+A+G N  GQLG G     + PRL  +P L    S +V+   G +H
Sbjct: 656 GSYHSLALRSDGWVWAWGFNFEGQLGNG----TSTPRL--SPGLVAGMSNAVAIIAGDQH 709

Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
           +  +  DG V+ WG N  GQLG GD  +   P QV
Sbjct: 710 SLAMKADGTVWAWGLNIKGQLGTGDTTEAWFPVQV 744



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 88/286 (30%), Positives = 128/286 (44%), Gaps = 40/286 (13%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPC- 270
           P  V+L     + T+ AG  H+LA+   G VW WG     QLG G+   + SSP P+   
Sbjct: 293 PVSVSLTD---VRTLVAGNYHSLAVRTDGAVWAWGDNRYRQLGTGN---LTSSPLPLQAG 346

Query: 271 ----IESSYGKDRSAAL-SRGSVNSEGPGF-----------RVPGNYVKGIACG------ 308
               +    G   S AL + G+  S G              R+    V G+A G      
Sbjct: 347 MTGGVTLVAGYRHSVALGADGTAWSWGDNVFGQLGDTTFEPRMAPVQVSGLALGRADATS 406

Query: 309 -GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI 367
              H+ ++   G L  +G    GQ G G+  D   P  V+      +  VA+G  HT  +
Sbjct: 407 GQLHTVMLGANGRLWAWGDNQQGQLGNGTQQDSSLPLPVNL---TDVISVASGYRHTAAL 463

Query: 368 SSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKV 427
            SDG V+ +G N+FGQLG G       P  +    L  V   +++ G  H+  +  +G V
Sbjct: 464 RSDGTVWTWGMNRFGQLGEG--TVTDRPTPVQVVGLGGV--TAIATGDNHSLALRSNGTV 519

Query: 428 FCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
           + WG+N+YGQLG G  +DR  P Q + +   V   +A G  H+L L
Sbjct: 520 WAWGFNRYGQLGDGTAVDRRQPVQASGLSNIVA--IAAGGSHSLAL 563



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 94/364 (25%), Positives = 150/364 (41%), Gaps = 52/364 (14%)

Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRS 168
           H +A+   G V+ WG          +G L  GT       +R           R+ V+ +
Sbjct: 261 HALALRADGTVWAWG-------HNAYGQLGDGTNT-----QRTQPVSVSLTDVRTLVAGN 308

Query: 169 SGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAA 228
               +  TDG       ++ R++           +G+   S  P    +  GV   T+ A
Sbjct: 309 YHSLAVRTDGAVWAWGDNRYRQL----------GTGNLTSSPLPLQAGMTGGV---TLVA 355

Query: 229 GGRHTLALSDIGQVWGWGYGGEGQLG-----------------LGSRIRMVSSPHPIPCI 271
           G RH++AL   G  W WG    GQLG                 LG         H +   
Sbjct: 356 GYRHSVALGADGTAWSWGDNVFGQLGDTTFEPRMAPVQVSGLALGRADATSGQLHTVMLG 415

Query: 272 ES----SYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWG 327
            +    ++G ++   L  G+         V    V  +A G RH+A +   G + T+G  
Sbjct: 416 ANGRLWAWGDNQQGQLGNGTQQDSSLPLPVNLTDVISVASGYRHTAALRSDGTVWTWGMN 475

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG 387
            +GQ G+G+  D  +P  V  L G  +  +A G  H++ + S+G V+A+G N++GQLG G
Sbjct: 476 RFGQLGEGTVTDRPTPVQVVGLGG--VTAIATGDNHSLALRSNGTVWAWGFNRYGQLGDG 533

Query: 388 GDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
                  P  + A  L N+   +++ G  H+  +  DG V+ +G+N  GQLG G      
Sbjct: 534 TAVDRRQP--VQASGLSNI--VAIAAGGSHSLALRSDGTVWAFGYNFDGQLGNGTRTWTL 589

Query: 448 IPSQ 451
           +P Q
Sbjct: 590 VPVQ 593



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/234 (30%), Positives = 106/234 (45%), Gaps = 38/234 (16%)

Query: 219 PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
           P VR+A    G  H+LA+   G V+ WG+   GQLG G+  R  +SP  +  +       
Sbjct: 51  PPVRLAL---GQYHSLAVHSDGTVFAWGFNRLGQLGDGTS-RDKASPVQVAGLTQ----- 101

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
                                  V  +A G ++S  +   GA+  +G    GQ G G+  
Sbjct: 102 -----------------------VTSVAAGDQYSLALDADGAVWAWGDNASGQLGDGTLT 138

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
             L P  VS+L    +  +A+G  H + + +DG V+A+G N+  QLG G     ++P  L
Sbjct: 139 SRLLPQRVSAL--SNVVSLASGFAHVLALRADGTVWAWGDNRNNQLGDGTLTRSSVP--L 194

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
             P L  V   +V  G   +  +  DG ++ WG N+YGQLG G  + R  P QV
Sbjct: 195 QVPGLSGV--VAVVAGGSSSLALRADGTLWAWGDNRYGQLGDGTTVRRITPVQV 246


>gi|114595107|ref|XP_001160807.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
           [Pan troglodytes]
          Length = 984

 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 79/251 (31%), Positives = 118/251 (47%), Gaps = 30/251 (11%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  V+ G  H+LA+   G+V+ WG G EGQLG+G    +  +P  I  +           
Sbjct: 77  VDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLN---------- 126

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDEL 341
                           G  +  ++CG  HS  ++    + ++G   +GQ G G     + 
Sbjct: 127 ----------------GIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQA 170

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLP-RLLDA 400
           SP  V SL GI +  VAAG  H+  +S  G  + +G N  GQL   G        + L  
Sbjct: 171 SPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSV 230

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVP 459
            +L+N+    +SCG  HTAV+  DGKVF +G N+ GQLG     ++  P  V  I+G V 
Sbjct: 231 GALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVS 290

Query: 460 RNVACGWWHTL 470
           + + CG +HTL
Sbjct: 291 Q-IDCGSYHTL 300



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 37/232 (15%)

Query: 206 ENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSP 265
           + +S  P  +T   G++I  V+ G  H+LALS   QV+ WG    GQLGLG      +SP
Sbjct: 113 KEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASP 172

Query: 266 HPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFG 325
             +  +E                          G  +  +A GG HS  ++  G   +FG
Sbjct: 173 QRVRSLE--------------------------GIPLAQVAAGGAHSFALSLCGT--SFG 204

Query: 326 W-----GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
           W     G     G+        P  V +L  + +  ++ G  HT  ++ DG V+ FG N+
Sbjct: 205 WGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNR 264

Query: 381 FGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
            GQLG      +  P+L++   ++ + S+ + CG+ HT A +   G+V  +G
Sbjct: 265 SGQLGYSPTPEKRGPQLVE--RIDGLVSQ-IDCGSYHTLAYVHTTGQVVSFG 313



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 58/185 (31%), Positives = 93/185 (50%), Gaps = 15/185 (8%)

Query: 298 PGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ-GSTDDELSPNCVSSLLGIQIEG 356
           PG  +   A G RHS ++     +L+ G    GQ G+ G+   EL P  + +L  + ++ 
Sbjct: 21  PGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGEL-PEPIQALETLTVDL 79

Query: 357 VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL-PRLLDAPSLENVHSKSVSCGA 415
           V+ G  H++ +   G V+A+G    GQLG G  +  +  P+ +   +L  +    VSCG 
Sbjct: 80  VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIT--TLNGIKIIQVSCGH 137

Query: 416 RHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV------TIEGCVPRNVACGWWHT 469
            H+  ++ D +VF WG N +GQLGLG    +  PSQ       ++EG     VA G  H+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLG----KEFPSQASPQRVRSLEGIPLAQVAAGGAHS 193

Query: 470 LLLAV 474
             L++
Sbjct: 194 FALSL 198


>gi|351705119|gb|EHB08038.1| RCC1 and BTB domain-containing protein 2 [Heterocephalus glaber]
          Length = 527

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 73/203 (35%), Positives = 111/203 (54%), Gaps = 7/203 (3%)

Query: 276 GKDRSAALSRGSVNSEGPGFRVPGNYVKGIAC----GGRHSAVITDAGALLTFGWGLYGQ 331
           G + S  L  G V S     R+     K IAC     G H  + T  G + T+G   Y Q
Sbjct: 47  GTNCSGCLGLGDVQSTLEPRRLDSLSDKKIACLSYGSGPHIILATTEGEVFTWGHNGYTQ 106

Query: 332 CGQGSTDDELSPNCVSS-LLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            G G+T+  L P  VS+ L   Q+  VA G +H++ ++SDG+VYA+G N  GQ+G+G   
Sbjct: 107 LGNGTTNHGLVPCQVSTNLSNKQVIEVACGSYHSLVLTSDGEVYAWGYNNSGQVGSGSTA 166

Query: 391 AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
            + +PR +    L+N    +++CG   +  + D G+V+ WG+N  GQLGLG   ++  P 
Sbjct: 167 NQAIPRRVTG-CLQNKVVVNIACGQMCSVAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPC 225

Query: 451 QVT-IEGCVPRNVACGWWHTLLL 472
           +V  ++G   + VACG+ HTL+L
Sbjct: 226 RVAALQGIRVQRVACGFAHTLVL 248



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 122/251 (48%), Gaps = 31/251 (12%)

Query: 222 RIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           +IA ++ G G H +  +  G+V+ WG+ G  QLG G+     ++   +PC  S+      
Sbjct: 75  KIACLSYGSGPHIILATTEGEVFTWGHNGYTQLGNGT-----TNHGLVPCQVST------ 123

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                           +    V  +ACG  HS V+T  G +  +G+   GQ G GST ++
Sbjct: 124 ---------------NLSNKQVIEVACGSYHSLVLTSDGEVYAWGYNNSGQVGSGSTANQ 168

Query: 341 LSPNCVSSLLGIQIE-GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLD 399
             P  V+  L  ++   +A G   ++ +   G+VY +G N  GQLG G    +  P    
Sbjct: 169 AIPRRVTGCLQNKVVVNIACGQMCSVAVVDTGEVYVWGYNGNGQLGLGSSGNQPTP--CR 226

Query: 400 APSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE-GCV 458
             +L+ +  + V+CG  HT V+ D+G+V+ WG N YGQLG G+  +++ P+ V +E   +
Sbjct: 227 VAALQGIRVQRVACGFAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRI 286

Query: 459 PRNVACGWWHT 469
               AC   HT
Sbjct: 287 IEIAACHSTHT 297



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/233 (29%), Positives = 110/233 (47%), Gaps = 34/233 (14%)

Query: 203 SGDENLSAFPCLVTLN-PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +G  N    PC V+ N    ++  VA G  H+L L+  G+V+ WGY   GQ+G GS    
Sbjct: 109 NGTTNHGLVPCQVSTNLSNKQVIEVACGSYHSLVLTSDGEVYAWGYNNSGQVGSGSTANQ 168

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
                   C+++                            V  IACG   S  + D G +
Sbjct: 169 AIPRRVTGCLQNKV--------------------------VVNIACGQMCSVAVVDTGEV 202

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             +G+   GQ G GS+ ++ +P  V++L GI+++ VA G  HT+ ++ +G VYA+G N +
Sbjct: 203 YVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGFAHTLVLTDEGQVYAWGANSY 262

Query: 382 GQLGTGG--DQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           GQLGTG   +Q+   P +++   +  +     +C + HT A     G V+ WG
Sbjct: 263 GQLGTGNKSNQSYPTPVVVEKDRIIEI----AACHSTHTSAAKTQGGHVYMWG 311



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 57/114 (50%), Gaps = 7/114 (6%)

Query: 361 LWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
           L+ TI    + +++  G N  G LG G  Q+   PR LD+ S + +   S   G  H  +
Sbjct: 35  LYTTI----NDEIFVLGTNCSGCLGLGDVQSTLEPRRLDSLSDKKIACLSYGSGP-HIIL 89

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPR--NVACGWWHTLLL 472
              +G+VF WG N Y QLG G      +P QV+      +   VACG +H+L+L
Sbjct: 90  ATTEGEVFTWGHNGYTQLGNGTTNHGLVPCQVSTNLSNKQVIEVACGSYHSLVL 143


>gi|62898714|dbj|BAD97211.1| retinitis pigmentosa GTPase regulator variant [Homo sapiens]
          Length = 815

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 98/303 (32%), Positives = 143/303 (47%), Gaps = 45/303 (14%)

Query: 208 LSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR--------I 259
           +S   C+  L P  ++   A G  HTL  ++ G V+  G   EGQLGLG          I
Sbjct: 75  ISKPTCVKALKPE-KVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVI 133

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSV------NSEG------------PGFRVPGNY 301
              +S H I  +  S G + SAAL+          NSEG            P     G  
Sbjct: 134 SFFTSEHKIKQL--SAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKP 191

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST--DDELSPNCVSSLLGIQIEGVAA 359
           V  I+CG  HSA +T  G L  FG    G+ G  +    +  +P  VS +    I+ VA 
Sbjct: 192 VSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVIQ-VAC 250

Query: 360 GLWHTICISSDGDVYAFGGNQFGQLGTGGDQAET-LPRLLDAPSLENVHSKS---VSCGA 415
           G  HT+ ++ +  VY FG  QFGQLG G    ET  P++     +EN+  ++   +SCG 
Sbjct: 251 GGEHTVVLTENA-VYTFGLGQFGQLGLGTFLFETSEPKV-----IENIRDQTISYISCGE 304

Query: 416 RHTAVIADDGKVFCWGWNKYGQLGLG--DVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
            HTA+I D G ++ +G  ++G+LGLG  +  +  IP+  +     + + VACG  H ++ 
Sbjct: 305 NHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVF 364

Query: 473 AVP 475
           A P
Sbjct: 365 AAP 367



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 60/170 (35%), Positives = 93/170 (54%), Gaps = 2/170 (1%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           ++CG  HSAV+T    L  FG   +GQ G GS      P CV +L   +++  A G  HT
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHT 99

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           +  +  G+VYA GGN  GQLG G  +      ++   + E+   K +S G+  +A + +D
Sbjct: 100 LVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEH-KIKQLSAGSNTSAALTED 158

Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAV 474
           G++F WG N  GQ+GL +V +  +P QVTI   V   ++CG++H+  +  
Sbjct: 159 GRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSW-ISCGYYHSAFVTT 207



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/279 (23%), Positives = 126/279 (45%), Gaps = 38/279 (13%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIE------SSYGKDR 279
           ++ G  H+  ++   +++ +G    GQLGLGS+   +S P  +  ++      ++ G++ 
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSK-SAISKPTCVKALKPEKVKLAACGRNH 98

Query: 280 SAALSRGSV------NSEGP---------------GFRVPGNYVKGIACGGRHSAVITDA 318
           +   + G        N+EG                 F    + +K ++ G   SA +T+ 
Sbjct: 99  TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTED 158

Query: 319 GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           G L  +G    GQ G  +  +   P  V+  +G  +  ++ G +H+  +++DG++Y FG 
Sbjct: 159 GRLFMWGDNSEGQIGLKNVSNVCVPQQVT--IGKPVSWISCGYYHSAFVTTDGELYVFGE 216

Query: 379 NQFGQLGTGGDQ--AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYG 436
            + G+LG           P+L+     + +    V+CG  HT V+ ++  V+ +G  ++G
Sbjct: 217 PENGKLGLPNQLLGNHRTPQLVSEIPEKVIQ---VACGGEHTVVLTENA-VYTFGLGQFG 272

Query: 437 QLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLA 473
           QLGLG  +      +V   I       ++CG  HT L+ 
Sbjct: 273 QLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALIT 311



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 89/330 (26%), Positives = 140/330 (42%), Gaps = 66/330 (20%)

Query: 103 AAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPR 162
           AA G  H +  TEGG VY  G       G   G L  G   +++ F   S F +E     
Sbjct: 92  AACGRNHTLVSTEGGNVYATG-------GNNEGQLGLGDTEERNTFHVISFFTSEH--KI 142

Query: 163 SQVSRSSGGTSSGT-DGR----GSGEEGSKRRRISLAKQTAESSSSGDENLS--AFPCLV 215
            Q+S  S  +++ T DGR    G   EG                  G +N+S    P  V
Sbjct: 143 KQLSAGSNTSAALTEDGRLFMWGDNSEG----------------QIGLKNVSNVCVPQQV 186

Query: 216 TLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSY 275
           T+  G  ++ ++ G  H+  ++  G+++ +G    G+LGL +++                
Sbjct: 187 TI--GKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQL---------------L 229

Query: 276 GKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG 335
           G  R+  L             +P   ++ +ACGG H+ V+T+  A+ TFG G +GQ G G
Sbjct: 230 GNHRTPQLVS----------EIPEKVIQ-VACGGEHTVVLTE-NAVYTFGLGQFGQLGLG 277

Query: 336 STDDELS-PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAET- 393
           +   E S P  + ++    I  ++ G  HT  I+  G +Y FG  + G+LG G +     
Sbjct: 278 TFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNH 337

Query: 394 -LPRLLDAPSLENVHSKSVSCGARHTAVIA 422
            +P L    +      K V+CG  H  V A
Sbjct: 338 FIPTL--CSNFLRFIVKLVACGGCHMVVFA 365


>gi|4506581|ref|NP_000319.1| X-linked retinitis pigmentosa GTPase regulator isoform A [Homo
           sapiens]
 gi|1314871|gb|AAC50481.1| retinitis pigmentosa GTPase regulator [Homo sapiens]
 gi|2204218|emb|CAA66258.1| XLRP3 [Homo sapiens]
 gi|119579845|gb|EAW59441.1| retinitis pigmentosa GTPase regulator, isoform CRA_a [Homo sapiens]
          Length = 815

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 98/303 (32%), Positives = 143/303 (47%), Gaps = 45/303 (14%)

Query: 208 LSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR--------I 259
           +S   C+  L P  ++   A G  HTL  ++ G V+  G   EGQLGLG          I
Sbjct: 75  ISKPTCVKALKPE-KVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVI 133

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSV------NSEG------------PGFRVPGNY 301
              +S H I  +  S G + SAAL+          NSEG            P     G  
Sbjct: 134 SFFTSEHKIKQL--SAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKP 191

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST--DDELSPNCVSSLLGIQIEGVAA 359
           V  I+CG  HSA +T  G L  FG    G+ G  +    +  +P  VS +    I+ VA 
Sbjct: 192 VSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVIQ-VAC 250

Query: 360 GLWHTICISSDGDVYAFGGNQFGQLGTGGDQAET-LPRLLDAPSLENVHSKS---VSCGA 415
           G  HT+ ++ +  VY FG  QFGQLG G    ET  P++     +EN+  ++   +SCG 
Sbjct: 251 GGEHTVVLTENA-VYTFGLGQFGQLGLGTFLFETSEPKV-----IENIRDQTISYISCGE 304

Query: 416 RHTAVIADDGKVFCWGWNKYGQLGLG--DVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
            HTA+I D G ++ +G  ++G+LGLG  +  +  IP+  +     + + VACG  H ++ 
Sbjct: 305 NHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVF 364

Query: 473 AVP 475
           A P
Sbjct: 365 AAP 367



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 60/170 (35%), Positives = 93/170 (54%), Gaps = 2/170 (1%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           ++CG  HSAV+T    L  FG   +GQ G GS      P CV +L   +++  A G  HT
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHT 99

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           +  +  G+VYA GGN  GQLG G  +      ++   + E+   K +S G+  +A + +D
Sbjct: 100 LVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEH-KIKQLSAGSNTSAALTED 158

Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAV 474
           G++F WG N  GQ+GL +V +  +P QVTI   V   ++CG++H+  +  
Sbjct: 159 GRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSW-ISCGYYHSAFVTT 207



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/279 (23%), Positives = 126/279 (45%), Gaps = 38/279 (13%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIE------SSYGKDR 279
           ++ G  H+  ++   +++ +G    GQLGLGS+   +S P  +  ++      ++ G++ 
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSK-SAISKPTCVKALKPEKVKLAACGRNH 98

Query: 280 SAALSRGSV------NSEGP---------------GFRVPGNYVKGIACGGRHSAVITDA 318
           +   + G        N+EG                 F    + +K ++ G   SA +T+ 
Sbjct: 99  TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTED 158

Query: 319 GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           G L  +G    GQ G  +  +   P  V+  +G  +  ++ G +H+  +++DG++Y FG 
Sbjct: 159 GRLFMWGDNSEGQIGLKNVSNVCVPQQVT--IGKPVSWISCGYYHSAFVTTDGELYVFGE 216

Query: 379 NQFGQLGTGGDQ--AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYG 436
            + G+LG           P+L+     + +    V+CG  HT V+ ++  V+ +G  ++G
Sbjct: 217 PENGKLGLPNQLLGNHRTPQLVSEIPEKVIQ---VACGGEHTVVLTENA-VYTFGLGQFG 272

Query: 437 QLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLA 473
           QLGLG  +      +V   I       ++CG  HT L+ 
Sbjct: 273 QLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALIT 311



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 89/330 (26%), Positives = 140/330 (42%), Gaps = 66/330 (20%)

Query: 103 AAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPR 162
           AA G  H +  TEGG VY  G       G   G L  G   +++ F   S F +E     
Sbjct: 92  AACGRNHTLVSTEGGNVYATG-------GNNEGQLGLGDTEERNTFHVISFFTSEH--KI 142

Query: 163 SQVSRSSGGTSSGT-DGR----GSGEEGSKRRRISLAKQTAESSSSGDENLS--AFPCLV 215
            Q+S  S  +++ T DGR    G   EG                  G +N+S    P  V
Sbjct: 143 KQLSAGSNTSAALTEDGRLFMWGDNSEG----------------QIGLKNVSNVCVPQQV 186

Query: 216 TLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSY 275
           T+  G  ++ ++ G  H+  ++  G+++ +G    G+LGL +++                
Sbjct: 187 TI--GKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQL---------------L 229

Query: 276 GKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG 335
           G  R+  L             +P   ++ +ACGG H+ V+T+  A+ TFG G +GQ G G
Sbjct: 230 GNHRTPQLVS----------EIPEKVIQ-VACGGEHTVVLTE-NAVYTFGLGQFGQLGLG 277

Query: 336 STDDELS-PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAET- 393
           +   E S P  + ++    I  ++ G  HT  I+  G +Y FG  + G+LG G +     
Sbjct: 278 TFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNH 337

Query: 394 -LPRLLDAPSLENVHSKSVSCGARHTAVIA 422
            +P L    +      K V+CG  H  V A
Sbjct: 338 FIPTL--CSNFLRFIVKLVACGGCHMVVFA 365


>gi|383319169|ref|YP_005380010.1| chromosome condensation regulator RCC1 [Methanocella conradii
           HZ254]
 gi|379320539|gb|AFC99491.1| regulator of chromosome condensation RCC1 [Methanocella conradii
           HZ254]
          Length = 438

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 113/402 (28%), Positives = 174/402 (43%), Gaps = 63/402 (15%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
           G G ++A+ D+  + TWG +   G  Y  S +   +P+  P+    S+      +A   A
Sbjct: 49  GHGLSVALLDNGTVWTWGHSWHGGLGY-ESVQDQYVPKRVPIYNVTSVDSC---FASVAA 104

Query: 113 VTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGT 172
           + + G V+TWGW E       +G L  GT +D +        +    + R+     S   
Sbjct: 105 LKDDGTVWTWGWNE-------YGQLGDGTTMDHNT----PGMVGGLGNVRAVAVGISHML 153

Query: 173 SSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRH 232
           + G DG             +  K        G    S  P  V+  P  RI  ++AG  H
Sbjct: 154 ALGNDGT----------VWAWGKNNCGQLGDGTNVDSMTPVRVSGLP--RIVAISAGYNH 201

Query: 233 TLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEG 292
            LA+ D G VW WG    GQLG G+ I   SSP+P                 +G  N   
Sbjct: 202 NLAIDDAGNVWTWGLNDCGQLGDGTNI---SSPNPKKV--------------KGLAN--- 241

Query: 293 PGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGI 352
                    V  +A G   S  + D G +  +G  + G+ G G+T D   P  V  L   
Sbjct: 242 ---------VTAVAGGSSFSLALKDDGTIWAWGSNVQGELGVGTTKDCPLPVKVQGL--T 290

Query: 353 QIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVS 412
            +  +AAG   +  I++DG ++ +G N+ G+  +GG+ A +  R   A  L NV  K V 
Sbjct: 291 NVIRIAAGGETSAAITNDGSLWVWGHNEQGKYISGGEDASSPRR---ASGLSNV--KLVD 345

Query: 413 CGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI 454
            G  +   + +DG ++  G N++GQLG G+  DRN+P++V I
Sbjct: 346 IGTINIIALENDGSLWVVGDNQFGQLGTGNTYDRNMPARVAI 387



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 81/250 (32%), Positives = 109/250 (43%), Gaps = 46/250 (18%)

Query: 211 FPCLVTLNPGVRIAT-------VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
           F CLV +  GVR A        VA G   ++AL D G VW WG+   G LG  S      
Sbjct: 25  FVCLVAM-AGVRCAASQPSVVDVAEGHGLSVALLDNGTVWTWGHSWHGGLGYES------ 77

Query: 264 SPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLT 323
                  ++  Y   R    +  SV+S                C    +A + D G + T
Sbjct: 78  -------VQDQYVPKRVPIYNVTSVDS----------------CFASVAA-LKDDGTVWT 113

Query: 324 FGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQ 383
           +GW  YGQ G G+T D  +P  V  L    +  VA G+ H + + +DG V+A+G N  GQ
Sbjct: 114 WGWNEYGQLGDGTTMDHNTPGMVGGLG--NVRAVAVGISHMLALGNDGTVWAWGKNNCGQ 171

Query: 384 LGTGGDQAETLP-RLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGD 442
           LG G +     P R+   P +      ++S G  H   I D G V+ WG N  GQLG G 
Sbjct: 172 LGDGTNVDSMTPVRVSGLPRI-----VAISAGYNHNLAIDDAGNVWTWGLNDCGQLGDGT 226

Query: 443 VIDRNIPSQV 452
            I    P +V
Sbjct: 227 NISSPNPKKV 236



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 68/135 (50%), Gaps = 13/135 (9%)

Query: 345 CVSSLLGIQ-------IEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
           C+ ++ G++       +  VA G   ++ +  +G V+ +G +  G LG    Q + +P+ 
Sbjct: 27  CLVAMAGVRCAASQPSVVDVAEGHGLSVALLDNGTVWTWGHSWHGGLGYESVQDQYVPKR 86

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC 457
           +   ++ +V S   S      A + DDG V+ WGWN+YGQLG G  +D N P  V   G 
Sbjct: 87  VPIYNVTSVDSCFAS-----VAALKDDGTVWTWGWNEYGQLGDGTTMDHNTPGMVGGLGN 141

Query: 458 VPRNVACGWWHTLLL 472
           V R VA G  H L L
Sbjct: 142 V-RAVAVGISHMLAL 155


>gi|237840751|ref|XP_002369673.1| regulator of chromosome condensation RCC1 domain-containing protein
           [Toxoplasma gondii ME49]
 gi|211967337|gb|EEB02533.1| regulator of chromosome condensation RCC1 domain-containing protein
           [Toxoplasma gondii ME49]
 gi|221503319|gb|EEE29017.1| regulator of chromosome condensation RCC1 domain-containing protein
           [Toxoplasma gondii VEG]
          Length = 1015

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 74/241 (30%), Positives = 116/241 (48%), Gaps = 8/241 (3%)

Query: 203 SGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMV 262
           +GD   ++ P LV    G  +  VA    HT+   D G  + WG    G+LGL      +
Sbjct: 167 TGDRRDASVPRLVKALHGKVVKAVACSQEHTVCCLDDGSAYAWGCALNGRLGLHGL--SI 224

Query: 263 SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVI----TDA 318
            S   +     + G       S  +V +      + G ++  +ACG  HSA +     D 
Sbjct: 225 PSSAGLGVFSPATGARPEPLASACAVCTPRVLESLCGYFIADVACGPYHSAFLGIYEQDR 284

Query: 319 GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            +L T G GL G+ G G  +D   P  V +L  + I  +A G  HT C++S G +Y +GG
Sbjct: 285 TSLFTCGLGLNGRLGHGDEEDRHLPTAVHALENVNITAIACGAHHTACVTSAGTLYTWGG 344

Query: 379 NQFGQLGTGGDQ-AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQ 437
             FG+LG G  + ++ LP+ +  P L N    SV+ G++H+A +  DG+++ WG  + G 
Sbjct: 345 AAFGKLGLGSTRGSQLLPKHVSGP-LRNKAVVSVALGSQHSACVTTDGELYTWGQGRRGN 403

Query: 438 L 438
           L
Sbjct: 404 L 404



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 77/292 (26%), Positives = 118/292 (40%), Gaps = 61/292 (20%)

Query: 210 AFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP 269
           A P LV     +    V+AGG     ++  G+++ WG   EGQLG G R R  S P  + 
Sbjct: 122 ASPRLVDALKNINSERVSAGGMQMAVVAHSGELYMWGANSEGQLGTGDR-RDASVPRLVK 180

Query: 270 CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
            +                           G  VK +AC   H+    D G+   +G  L 
Sbjct: 181 ALH--------------------------GKVVKAVACSQEHTVCCLDDGSAYAWGCALN 214

Query: 330 GQCG------------------QGSTDDEL-------SPNCVSSLLGIQIEGVAAGLWHT 364
           G+ G                   G+  + L       +P  + SL G  I  VA G +H+
Sbjct: 215 GRLGLHGLSIPSSAGLGVFSPATGARPEPLASACAVCTPRVLESLCGYFIADVACGPYHS 274

Query: 365 ----ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
               I       ++  G    G+LG G ++   LP  + A  LENV+  +++CGA HTA 
Sbjct: 275 AFLGIYEQDRTSLFTCGLGLNGRLGHGDEEDRHLPTAVHA--LENVNITAIACGAHHTAC 332

Query: 421 IADDGKVFCWGWNKYGQLGLGDVI-DRNIPSQVT--IEGCVPRNVACGWWHT 469
           +   G ++ WG   +G+LGLG     + +P  V+  +      +VA G  H+
Sbjct: 333 VTSAGTLYTWGGAAFGKLGLGSTRGSQLLPKHVSGPLRNKAVVSVALGSQHS 384



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 76/168 (45%), Gaps = 34/168 (20%)

Query: 336 STDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLP 395
           ++++  SP  V +L  I  E V+AG      ++  G++Y +G N  GQLGTG  +  ++P
Sbjct: 117 TSEEMASPRLVDALKNINSERVSAGGMQMAVVAHSGELYMWGANSEGQLGTGDRRDASVP 176

Query: 396 RLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI- 454
           RL+ A  L     K+V+C   HT    DDG  + WG    G+LGL  +   +IPS   + 
Sbjct: 177 RLVKA--LHGKVVKAVACSQEHTVCCLDDGSAYAWGCALNGRLGLHGL---SIPSSAGLG 231

Query: 455 -----------------EGCVPR-----------NVACGWWHTLLLAV 474
                              C PR           +VACG +H+  L +
Sbjct: 232 VFSPATGARPEPLASACAVCTPRVLESLCGYFIADVACGPYHSAFLGI 279


>gi|221482889|gb|EEE21220.1| regulator of chromosome condensation RCC1 domain-containing protein
           [Toxoplasma gondii GT1]
          Length = 1020

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 74/241 (30%), Positives = 116/241 (48%), Gaps = 8/241 (3%)

Query: 203 SGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMV 262
           +GD   ++ P LV    G  +  VA    HT+   D G  + WG    G+LGL      +
Sbjct: 167 TGDRRDASVPRLVKALHGKVVKAVACSQEHTVCCLDDGSAYAWGCALNGRLGLHGL--SI 224

Query: 263 SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVI----TDA 318
            S   +     + G       S  +V +      + G ++  +ACG  HSA +     D 
Sbjct: 225 PSSAGLGVFSPATGARPEPLASACAVCTPRVLESLCGYFIADVACGPYHSAFLGIYEQDR 284

Query: 319 GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            +L T G GL G+ G G  +D   P  V +L  + I  +A G  HT C++S G +Y +GG
Sbjct: 285 TSLFTCGLGLNGRLGHGDEEDRHLPTAVHALENVNITAIACGAHHTACVTSAGTLYTWGG 344

Query: 379 NQFGQLGTGGDQ-AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQ 437
             FG+LG G  + ++ LP+ +  P L N    SV+ G++H+A +  DG+++ WG  + G 
Sbjct: 345 AAFGKLGLGSTRGSQLLPKHVSGP-LRNKAVVSVALGSQHSACVTTDGELYTWGQGRRGN 403

Query: 438 L 438
           L
Sbjct: 404 L 404



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 77/292 (26%), Positives = 118/292 (40%), Gaps = 61/292 (20%)

Query: 210 AFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP 269
           A P LV     +    V+AGG     ++  G+++ WG   EGQLG G R R  S P  + 
Sbjct: 122 ASPRLVDALKNINSERVSAGGMQMAVVAHSGELYMWGANSEGQLGTGDR-RDASVPRLVK 180

Query: 270 CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
            +                           G  VK +AC   H+    D G+   +G  L 
Sbjct: 181 ALH--------------------------GKVVKAVACSQEHTVCCLDDGSAYAWGCALN 214

Query: 330 GQCG------------------QGSTDDEL-------SPNCVSSLLGIQIEGVAAGLWHT 364
           G+ G                   G+  + L       +P  + SL G  I  VA G +H+
Sbjct: 215 GRLGLHGLSIPSSAGLGVFSPATGARPEPLASACAVCTPRVLESLCGYFIADVACGPYHS 274

Query: 365 ----ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
               I       ++  G    G+LG G ++   LP  + A  LENV+  +++CGA HTA 
Sbjct: 275 AFLGIYEQDRTSLFTCGLGLNGRLGHGDEEDRHLPTAVHA--LENVNITAIACGAHHTAC 332

Query: 421 IADDGKVFCWGWNKYGQLGLGDVI-DRNIPSQVT--IEGCVPRNVACGWWHT 469
           +   G ++ WG   +G+LGLG     + +P  V+  +      +VA G  H+
Sbjct: 333 VTSAGTLYTWGGAAFGKLGLGSTRGSQLLPKHVSGPLRNKAVVSVALGSQHS 384



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 76/168 (45%), Gaps = 34/168 (20%)

Query: 336 STDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLP 395
           ++++  SP  V +L  I  E V+AG      ++  G++Y +G N  GQLGTG  +  ++P
Sbjct: 117 TSEEMASPRLVDALKNINSERVSAGGMQMAVVAHSGELYMWGANSEGQLGTGDRRDASVP 176

Query: 396 RLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI- 454
           RL+ A  L     K+V+C   HT    DDG  + WG    G+LGL  +   +IPS   + 
Sbjct: 177 RLVKA--LHGKVVKAVACSQEHTVCCLDDGSAYAWGCALNGRLGLHGL---SIPSSAGLG 231

Query: 455 -----------------EGCVPR-----------NVACGWWHTLLLAV 474
                              C PR           +VACG +H+  L +
Sbjct: 232 VFSPATGARPEPLASACAVCTPRVLESLCGYFIADVACGPYHSAFLGI 279


>gi|114595105|ref|XP_001160851.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
           [Pan troglodytes]
          Length = 1020

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 80/254 (31%), Positives = 120/254 (47%), Gaps = 36/254 (14%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  V+ G  H+LA+   G+V+ WG G EGQLG+G    +  +P  I  +           
Sbjct: 77  VDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLN---------- 126

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDEL 341
                           G  +  ++CG  HS  ++    + ++G   +GQ G G     + 
Sbjct: 127 ----------------GIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQA 170

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  V SL GI +  VAAG  H+  +S  G  + +G N  GQL   G     +P   + P
Sbjct: 171 SPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSG---RNVPVQSNKP 227

Query: 402 ----SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEG 456
               +L+N+    +SCG  HTAV+  DGKVF +G N+ GQLG     ++  P  V  I+G
Sbjct: 228 LSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDG 287

Query: 457 CVPRNVACGWWHTL 470
            V + + CG +HTL
Sbjct: 288 LVSQ-IDCGSYHTL 300



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 64/224 (28%), Positives = 101/224 (45%), Gaps = 38/224 (16%)

Query: 214 LVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES 273
           + TLN G++I  V+ G  H+LALS   QV+ WG    GQLGLG      +SP  +  +E 
Sbjct: 122 ITTLN-GIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLE- 179

Query: 274 SYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGW-----GL 328
                                    G  +  +A GG HS  ++  G   +FGW     G 
Sbjct: 180 -------------------------GIPLAQVAAGGAHSFALSLCGT--SFGWGSNSSGQ 212

Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGG 388
               G+        P  V +L  + +  ++ G  HT  ++ DG V+ FG N+ GQLG   
Sbjct: 213 LALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSP 272

Query: 389 DQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
              +  P+L++   ++ + S+ + CG+ HT A +   G+V  +G
Sbjct: 273 TPEKRGPQLVE--RIDGLVSQ-IDCGSYHTLAYVHTTGQVVSFG 313



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 58/185 (31%), Positives = 93/185 (50%), Gaps = 15/185 (8%)

Query: 298 PGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ-GSTDDELSPNCVSSLLGIQIEG 356
           PG  +   A G RHS ++     +L+ G    GQ G+ G+   EL P  + +L  + ++ 
Sbjct: 21  PGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGEL-PEPIQALETLTVDL 79

Query: 357 VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL-PRLLDAPSLENVHSKSVSCGA 415
           V+ G  H++ +   G V+A+G    GQLG G  +  +  P+ +   +L  +    VSCG 
Sbjct: 80  VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIT--TLNGIKIIQVSCGH 137

Query: 416 RHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV------TIEGCVPRNVACGWWHT 469
            H+  ++ D +VF WG N +GQLGLG    +  PSQ       ++EG     VA G  H+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLG----KEFPSQASPQRVRSLEGIPLAQVAAGGAHS 193

Query: 470 LLLAV 474
             L++
Sbjct: 194 FALSL 198


>gi|410211612|gb|JAA03025.1| hect domain and RLD 6 [Pan troglodytes]
          Length = 1020

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 80/254 (31%), Positives = 120/254 (47%), Gaps = 36/254 (14%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  V+ G  H+LA+   G+V+ WG G EGQLG+G    +  +P  I  +           
Sbjct: 77  VDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLN---------- 126

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDEL 341
                           G  +  ++CG  HS  ++    + ++G   +GQ G G     + 
Sbjct: 127 ----------------GIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQA 170

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  V SL GI +  VAAG  H+  +S  G  + +G N  GQL   G     +P   + P
Sbjct: 171 SPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSG---RNVPVQSNKP 227

Query: 402 ----SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEG 456
               +L+N+    +SCG  HTAV+  DGKVF +G N+ GQLG     ++  P  V  I+G
Sbjct: 228 LSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDG 287

Query: 457 CVPRNVACGWWHTL 470
            V + + CG +HTL
Sbjct: 288 LVSQ-IDCGSYHTL 300



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 64/224 (28%), Positives = 101/224 (45%), Gaps = 38/224 (16%)

Query: 214 LVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES 273
           + TLN G++I  V+ G  H+LALS   QV+ WG    GQLGLG      +SP  +  +E 
Sbjct: 122 ITTLN-GIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLE- 179

Query: 274 SYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGW-----GL 328
                                    G  +  +A GG HS  ++  G   +FGW     G 
Sbjct: 180 -------------------------GIPLAQVAAGGAHSFALSLCGT--SFGWGSNSSGQ 212

Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGG 388
               G+        P  V +L  + +  ++ G  HT  ++ DG V+ FG N+ GQLG   
Sbjct: 213 LALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSP 272

Query: 389 DQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
              +  P+L++   ++ + S+ + CG+ HT A +   G+V  +G
Sbjct: 273 TPEKRGPQLVE--RIDGLVSQ-IDCGSYHTLAYVHTTGQVVSFG 313



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 58/185 (31%), Positives = 93/185 (50%), Gaps = 15/185 (8%)

Query: 298 PGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ-GSTDDELSPNCVSSLLGIQIEG 356
           PG  +   A G RHS ++     +L+ G    GQ G+ G+   EL P  + +L  + ++ 
Sbjct: 21  PGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGEL-PEPIQALETLTVDL 79

Query: 357 VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL-PRLLDAPSLENVHSKSVSCGA 415
           V+ G  H++ +   G V+A+G    GQLG G  +  +  P+ +   +L  +    VSCG 
Sbjct: 80  VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIT--TLNGIKIIQVSCGH 137

Query: 416 RHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV------TIEGCVPRNVACGWWHT 469
            H+  ++ D +VF WG N +GQLGLG    +  PSQ       ++EG     VA G  H+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLG----KEFPSQASPQRVRSLEGIPLAQVAAGGAHS 193

Query: 470 LLLAV 474
             L++
Sbjct: 194 FALSL 198


>gi|391347040|ref|XP_003747773.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Metaseiulus occidentalis]
          Length = 523

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 66/179 (36%), Positives = 96/179 (53%), Gaps = 5/179 (2%)

Query: 293 PG-FRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
           PG F V  + V  +ACG +HS  IT +G   +FG   YGQ G G T   ++P CV +L  
Sbjct: 34  PGTFWVKNDAVISVACGDQHSVFITASGRTFSFGSNDYGQLGHGHTKALVNPRCVKALKD 93

Query: 352 IQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQA-ETLPRLLDAPSLENVHSKS 410
            +   VA G  HT+  + D  VYAFG N   QLG     A    P+L+   +L  V  K+
Sbjct: 94  KRAILVACGRSHTLVATDDKKVYAFGINSEHQLGVKSSAAYHADPQLV--ATLNGVQVKA 151

Query: 411 VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHT 469
           ++ GA H+  ++  G V+ WG +++GQLGLG    R +P Q+  EG     ++ G +H+
Sbjct: 152 LTAGADHSLALSAKGIVYLWGSSEHGQLGLGRKKQRKLPVQLKTEGKAIA-ISAGAYHS 209



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 83/272 (30%), Positives = 121/272 (44%), Gaps = 38/272 (13%)

Query: 210 AFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP 269
           A P LV    GV++  + AG  H+LALS  G V+ WG    GQLGLG +         +P
Sbjct: 136 ADPQLVATLNGVQVKALTAGADHSLALSAKGIVYLWGSSEHGQLGLGRK-----KQRKLP 190

Query: 270 CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
                             + +EG            I+ G  HSA +   G L TFG   +
Sbjct: 191 V----------------QLKTEGKAI--------AISAGAYHSAYVNTDGVLYTFGETEH 226

Query: 330 GQCGQGSTDDEL-SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGG 388
           G+ G      +   P+ V  + G+ +  VA G  HT+ ++ DG  Y+FG    GQLG G 
Sbjct: 227 GKLGTNLAPKKCRKPSKVPDIQGL-VTSVACGGSHTVALTCDGRAYSFGDGSQGQLGLGQ 285

Query: 389 DQAET-LPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGD---VI 444
                  P L+  P+   V    VS G  HTA +++  +++  G  ++G+L L D     
Sbjct: 286 RVTHAGRPHLIQMPT--GVKMARVSAGQSHTAFLSEGRQMYTCGEGRHGKLALEDGEMGS 343

Query: 445 DRNIPSQVTIEGCVP-RNVACGWWHTLLLAVP 475
           ++  P  V I      + V+CG  HTL+L VP
Sbjct: 344 NKFSPMLVDILSLFQVQQVSCGGCHTLVLVVP 375



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 73/325 (22%), Positives = 126/325 (38%), Gaps = 64/325 (19%)

Query: 54  CG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCV 111
           CG    +  +D +K+  +G   +      +S  +   P+         +    AG  H +
Sbjct: 101 CGRSHTLVATDDKKVYAFGINSEHQLGVKSSAAYHADPQLVATLNGVQVKALTAGADHSL 160

Query: 112 AVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG 171
           A++  G VY WG  E        G L  G        ++Q     +  +    ++ S+G 
Sbjct: 161 ALSAKGIVYLWGSSE-------HGQLGLGR-------KKQRKLPVQLKTEGKAIAISAGA 206

Query: 172 TSSG---TDG--RGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATV 226
             S    TDG     GE    +   +LA +     S         P +  L     + +V
Sbjct: 207 YHSAYVNTDGVLYTFGETEHGKLGTNLAPKKCRKPSK-------VPDIQGL-----VTSV 254

Query: 227 AAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRG 286
           A GG HT+AL+  G+ + +G G +GQLGLG R+     PH I                  
Sbjct: 255 ACGGSHTVALTCDGRAYSFGDGSQGQLGLGQRVTHAGRPHLI------------------ 296

Query: 287 SVNSEGPGFRVP-GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD---DELS 342
                    ++P G  +  ++ G  H+A +++   + T G G +G+      +   ++ S
Sbjct: 297 ---------QMPTGVKMARVSAGQSHTAFLSEGRQMYTCGEGRHGKLALEDGEMGSNKFS 347

Query: 343 PNCVSSLLGIQIEGVAAGLWHTICI 367
           P  V  L   Q++ V+ G  HT+ +
Sbjct: 348 PMLVDILSLFQVQQVSCGGCHTLVL 372



 Score = 43.1 bits (100), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 86/207 (41%), Gaps = 29/207 (14%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
           G   ++A+S    +  WGS++  GQ  +  G+  +   P  L TE   +  +AG  H   
Sbjct: 155 GADHSLALSAKGIVYLWGSSEH-GQ--LGLGRKKQRKLPVQLKTEGKAIAISAGAYHSAY 211

Query: 113 VTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGT 172
           V   G +YT+G  E        G L  GT L      + S     Q    S     S   
Sbjct: 212 VNTDGVLYTFGETE-------HGKL--GTNLAPKKCRKPSKVPDIQGLVTSVACGGSHTV 262

Query: 173 SSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAA 228
           +   DGR    G G +G    ++ L ++   +           P L+ +  GV++A V+A
Sbjct: 263 ALTCDGRAYSFGDGSQG----QLGLGQRVTHAGR---------PHLIQMPTGVKMARVSA 309

Query: 229 GGRHTLALSDIGQVWGWGYGGEGQLGL 255
           G  HT  LS+  Q++  G G  G+L L
Sbjct: 310 GQSHTAFLSEGRQMYTCGEGRHGKLAL 336


>gi|348550629|ref|XP_003461134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cavia porcellus]
          Length = 4725

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 128/255 (50%), Gaps = 29/255 (11%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           V+IA   + G H LAL+  G+V+ WG G  G+LG G  +     P   P + S++   + 
Sbjct: 497 VKIAA-HSDGHHYLALAATGEVYSWGCGDGGRLGHGDTL-----PLEEPKVISAFSGKQG 550

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                             G +V  IACG  +SA IT  G L T+G G YG+ G GS++DE
Sbjct: 551 ------------------GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 592

Query: 341 LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
             P  V+ L G+++  VA  +G   T+ ++ +G V+++G   +G+LG GG      P+L+
Sbjct: 593 AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLI 652

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGC 457
           +   L+++    V CG++ +  +  DG+V+ WG     +LG G       P  +  ++G 
Sbjct: 653 E--KLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGK 710

Query: 458 VPRNVACGWWHTLLL 472
              +VA G  H L L
Sbjct: 711 KVIDVAAGSTHCLAL 725



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 105/215 (48%), Gaps = 37/215 (17%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GGRH  AL+  G+V+ WG G +G+LG  SR+     P  I  +++   +D  
Sbjct: 3048 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRD-- 3104

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                    IACG  HSA +T +G L T+G G YG+ G G    +
Sbjct: 3105 ------------------------IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ 3140

Query: 341  LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V  LLG ++  VA G     T+ ++ +G V+++G   FG+LG GG +   +P+  
Sbjct: 3141 LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ-- 3198

Query: 399  DAPSLENVHSK---SVSCGARHTAVIADDGKVFCW 430
               ++E ++ +    + CGA+ +  +   G V+ W
Sbjct: 3199 ---NIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3230



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 145/365 (39%), Gaps = 82/365 (22%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V   +G  HC+A++  GEVY+WG  E         D   G G ++   +R    + E + 
Sbjct: 3933 VAVNSGGKHCLALSSEGEVYSWGEAE---------DGKLGHG-NRSPCDRPR--VIESLR 3980

Query: 161  PRSQVSRSSGGTSSG-TDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
                V  ++GG  S      G      K R   L    +E            P LV +  
Sbjct: 3981 GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLK--------PKLVEVLQ 4032

Query: 220  GVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
            G R+  +A  +G   TL L+D   VW WG G  G+LG G                   G 
Sbjct: 4033 GHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-------------------GS 4073

Query: 278  DRSAALSRGSVNSEGPGFRVPGNY-------VKGIACGGRHSAVITDAGALLTFGWGLYG 330
            D               G +VP          V  + CG + S  +T +GA+ T+G G Y 
Sbjct: 4074 D---------------GCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4118

Query: 331  QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            + G GS D    P  V  L G ++  +A G  H +C + DG+VY +G N  GQLG G   
Sbjct: 4119 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTN 4178

Query: 391  AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
            A   PRL+ A  L+      V+CG+ HT           W  +K    G        +P+
Sbjct: 4179 AIQRPRLVAA--LQGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPA 4220

Query: 451  QVTIE 455
            QV +E
Sbjct: 4221 QVPME 4225



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 69/276 (25%), Positives = 122/276 (44%), Gaps = 50/276 (18%)

Query: 225  TVAAGGRHTLALSDIGQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAA 282
            T++AGG         G ++GWG+   GQLG   G+++++     P PC   +    R   
Sbjct: 3836 TLSAGGS--------GTIYGWGHNHRGQLGGIEGAKVKV-----PTPC--EALATLRPIQ 3880

Query: 283  LSRG-----SVNSEGPGF-------------------------RVPGNYVKGIAC--GGR 310
            L  G     +V ++G  +                          +   ++K +A   GG+
Sbjct: 3881 LIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGK 3940

Query: 311  HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
            H   ++  G + ++G    G+ G G+      P  + SL GI++  VAAG  H+ C+++ 
Sbjct: 3941 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAA 4000

Query: 371  GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
            GD+Y +G  ++G+LG    + +  P+L++      V   +   G   T  + DD  V+ W
Sbjct: 4001 GDLYTWGKGRYGRLGHSDSEDQLKPKLVEVLQGHRVVDIACGSGDAQTLCLTDDDTVWSW 4060

Query: 431  GWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
            G   YG+LG G      +P ++ ++ G     V CG
Sbjct: 4061 GDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECG 4096



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 92/217 (42%), Gaps = 38/217 (17%)

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
           SS DE   A P LV    G+++  VA  +G   TLA+++ GQVW WG G  G+LG G   
Sbjct: 588 SSEDE---AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG--- 641

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITD 317
                                     GS   + P    ++    V  + CG + S  +T 
Sbjct: 642 --------------------------GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTK 675

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
            G + ++G G   + G G+ +    P  +  L G ++  VAAG  H + ++ D +V+++G
Sbjct: 676 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
            N   Q         T P     P L+  H   ++CG
Sbjct: 736 SND--QCQHFDTLRVTKPEPTALPGLDTKHIVGIACG 770



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 120/276 (43%), Gaps = 48/276 (17%)

Query: 205  DENLSAFPCLVTLNP---------GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG- 254
            +E+L+A P L + N          G  I   AAG      +    +V+ WG   + QLG 
Sbjct: 2918 EEDLAAVPFLASDNEEEDDDKGSSGSLIRKKAAGLESAATIR--TKVFVWGLNDKDQLGG 2975

Query: 255  -LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSA 313
              GS+I++            S+ +  SA                  N V+ +A G +   
Sbjct: 2976 LKGSKIKV-----------PSFSETLSAL-----------------NVVQ-VAGGSKSLF 3006

Query: 314  VITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVA--AGLWHTICISSD 370
             +T  G +   G    G+ G G +   +  P  +++L    ++ VA  +G  H   ++ D
Sbjct: 3007 AVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVD 3066

Query: 371  GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
            G V+++G    G+LG         PRL++A  L+    + ++CG+ H+A +   G+++ W
Sbjct: 3067 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEA--LKTKRIRDIACGSSHSAALTSSGELYTW 3124

Query: 431  GWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACG 465
            G  +YG+LG GD   +  P  V +  G     VACG
Sbjct: 3125 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3160



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 77/178 (43%), Gaps = 8/178 (4%)

Query: 299  GNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTDDELSPNCVSSLLGIQIEG 356
            G+ ++  A G   +A I        F WGL    Q G         P+   +L  + +  
Sbjct: 2942 GSLIRKKAAGLESAATIRTK----VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ 2997

Query: 357  VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAET-LPRLLDAPSLENVHSKSVSCGA 415
            VA G      ++ +G VYA G    G+LG G       +PR + A S   V   +V  G 
Sbjct: 2998 VAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGG 3057

Query: 416  RHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLL 472
            RH   +  DGKVF WG    G+LG    ++ + P  +  ++    R++ACG  H+  L
Sbjct: 3058 RHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3115



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 82/331 (24%), Positives = 135/331 (40%), Gaps = 60/331 (18%)

Query: 53   GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
              G   A +   K+  WG  +D  Q     G   ++P      +  ++V+ A G     A
Sbjct: 2949 AAGLESAATIRTKVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 3007

Query: 113  VTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG- 171
            VT  G+VY  G      +GR+   LS+GT        RQ + L+  V  +  V+  SGG 
Sbjct: 3008 VTVEGKVYACGE---ATNGRLGLGLSSGTV----PIPRQITALSSYVVKK--VAVHSGGR 3058

Query: 172  --TSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIAT 225
              T+   DG+    G G++G         K    S  + D+     P L+      RI  
Sbjct: 3059 HATALTVDGKVFSWGEGDDG---------KLGHFSRMNCDK-----PRLIEALKTKRIRD 3104

Query: 226  VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
            +A G  H+ AL+  G+++ WG G  G+LG G                     D +  L  
Sbjct: 3105 IACGSSHSAALTSSGELYTWGLGEYGRLGHG---------------------DNTTQLKP 3143

Query: 286  GSVNSEGPGFRVPGNYVKGIACGGR--HSAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
              V        + G+ V  +ACG R   +  +TD G + ++G G +G+ G+G ++    P
Sbjct: 3144 KMVKV------LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIP 3197

Query: 344  NCVSSLLGIQIEGVAAGLWHTICISSDGDVY 374
              +  L G  +  +  G   ++ ++  G V+
Sbjct: 3198 QNIERLNGQGVCQIECGAQFSLALTKSGVVW 3228



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 5/73 (6%)

Query: 53   GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
            G  F++A++ S  + TWG  D   LG     S  H   P          ++  A G  HC
Sbjct: 4096 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRRPRQVQGLQGKKVIAIATGSLHC 4152

Query: 111  VAVTEGGEVYTWG 123
            V  TE GEVYTWG
Sbjct: 4153 VCCTEDGEVYTWG 4165


>gi|126631716|gb|AAI33847.1| Wu:fc44f06 protein [Danio rerio]
          Length = 389

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/235 (30%), Positives = 111/235 (47%), Gaps = 39/235 (16%)

Query: 278 DRSAAL---SRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
           +++AAL   S G V  + P F         +  G  H+ ++T  G L ++G G +GQ G 
Sbjct: 141 EQTAALPLVSGGFVQHKPPFFHPLKLCAVSLVLGSEHALLLTADGTLYSWGSGSHGQLGH 200

Query: 335 GSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQL---------- 384
           G+      P  V +L G+ I+ VAAG WH+  +SS GD+Y +G N+ GQL          
Sbjct: 201 GALTSLEDPQAVEALWGVPIKAVAAGNWHSAAVSSGGDLYMWGWNESGQLGLPSRGLEEE 260

Query: 385 -----GTGGDQA----------------ETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
                G+G D                  +  P L+D  ++  +    +SCG+RHTA +  
Sbjct: 261 KRRGNGSGNDDQPINTDEKSQTDVFISIQAFPALVDIANMSEI--SRISCGSRHTAAVTS 318

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQV---TIEGCVPRNVACGWWHTLLLAVP 475
            G ++ WGW +YGQLG G     + P+ V   +      ++V CG W+T +  VP
Sbjct: 319 AGDLYTWGWGQYGQLGHGTEHSTDEPTPVDYFSSHSLSVKDVVCGSWNTFVSVVP 373



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 99/255 (38%), Gaps = 57/255 (22%)

Query: 22  GALPQRSPILSPL-VVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTD--DLGQS 78
           G +  + P   PL +  + L +GS            A+ ++    L +WGS     LG  
Sbjct: 152 GFVQHKPPFFHPLKLCAVSLVLGSE----------HALLLTADGTLYSWGSGSHGQLGHG 201

Query: 79  YVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLS 138
            +TS    E P+         I   AAG  H  AV+ GG++Y WGW E   SG++     
Sbjct: 202 ALTSL---EDPQAVEALWGVPIKAVAAGNWHSAAVSSGGDLYMWGWNE---SGQL----- 250

Query: 139 TGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTA 198
              GL     E +                   G  SG D +    +   +  + ++ Q  
Sbjct: 251 ---GLPSRGLEEEKR----------------RGNGSGNDDQPINTDEKSQTDVFISIQ-- 289

Query: 199 ESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR 258
                      AFP LV +     I+ ++ G RHT A++  G ++ WG+G  GQLG G+ 
Sbjct: 290 -----------AFPALVDIANMSEISRISCGSRHTAAVTSAGDLYTWGWGQYGQLGHGTE 338

Query: 259 IRMVSSPHPIPCIES 273
                 P P+    S
Sbjct: 339 -HSTDEPTPVDYFSS 352


>gi|403306428|ref|XP_003943737.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Saimiri boliviensis
           boliviensis]
          Length = 4472

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 83/266 (31%), Positives = 130/266 (48%), Gaps = 30/266 (11%)

Query: 212 PCLVTLNPGVRIATVAA--GGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP 269
           P LV       I  +AA   G H LAL+  G+V+ WG G  G+LG G  +     P   P
Sbjct: 173 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEP 227

Query: 270 CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
              S++   ++                  G +V  IACG  +SA IT  G L T+G G Y
Sbjct: 228 KAISAFSGKQA------------------GKHVVHIACGSTYSAAITAEGELYTWGRGNY 269

Query: 330 GQCGQGSTDDELSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTG 387
           G+ G GS++DE  P  V+ L G+++  VA  +G   T+ ++ +G V+++G   +G+LG G
Sbjct: 270 GRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 329

Query: 388 GDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
           G      P+L++   L+++    V CG++ +  +  DG+V+ WG     +LG G      
Sbjct: 330 GSDGCKTPKLIE--KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR 387

Query: 448 IPSQVT-IEGCVPRNVACGWWHTLLL 472
            P  +  ++G    +VA G  H L L
Sbjct: 388 YPKLLEGLQGKKVIDVAAGSTHCLAL 413



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 128/303 (42%), Gaps = 80/303 (26%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GGRH  AL+  G+V+ WG G +G+LG  SR+     P  I  +++   +D  
Sbjct: 2685 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRD-- 2741

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                    IACG  HSA +T +G L T+G G YG+ G G    +
Sbjct: 2742 ------------------------IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ 2777

Query: 341  LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V  LLG ++  VA G     T+ ++ +G V+++G   FG+LG GG +   +P+ +
Sbjct: 2778 LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNI 2837

Query: 399  DAPSLE------------------------------------NVHSKS------------ 410
            +  + +                                    +VH +             
Sbjct: 2838 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI 2897

Query: 411  --VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWW 467
              V+ GA H   + D G+V+ WG N +GQ G G       P+ V  +EG     VACG  
Sbjct: 2898 VHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 2957

Query: 468  HTL 470
            H++
Sbjct: 2958 HSV 2960



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 131/328 (39%), Gaps = 66/328 (20%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V   +G  HC+A++  GEVY+WG  E        G L  G+    D        + E + 
Sbjct: 3680 VAVNSGGKHCLALSSEGEVYSWGEAE-------DGKLGHGSRSPCD-----RPRVIESLR 3727

Query: 161  PRSQVSRSSGGTSSG-TDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
                V  ++GG  S      G      K R   L    +E            P LV    
Sbjct: 3728 GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLK--------PKLVEALQ 3779

Query: 220  GVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
            G R+  +A  +G   TL L+D   VW WG G  G+LG G                   G 
Sbjct: 3780 GHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-------------------GS 3820

Query: 278  DRSAALSRGSVNSEGPGFRVPGNY-------VKGIACGGRHSAVITDAGALLTFGWGLYG 330
            D               G +VP          V  + CG + S  +T +GA+ T+G G Y 
Sbjct: 3821 D---------------GCKVPTKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 3865

Query: 331  QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            + G GS D    P  V  L G ++  +A G  H +C + DG+VY +G N  GQLG G   
Sbjct: 3866 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTN 3925

Query: 391  AETLPRLLDAPSLENVHSKSVSCGARHT 418
            A   PRL+ A  L+      V+CG+ HT
Sbjct: 3926 AIQRPRLVAA--LQGKKVNRVACGSAHT 3951



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 160/385 (41%), Gaps = 54/385 (14%)

Query: 65   KLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGW 124
            K+  WG  +D  Q     G   ++P      +  ++V+ A G     AVT  G+VY  G 
Sbjct: 2598 KVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 2656

Query: 125  KECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGR----G 180
                 +GR+   LS+GT          SS++ ++V+  S    ++  T    DG+    G
Sbjct: 2657 ---ATNGRLGLGLSSGTVPIPRQITALSSYMVKKVAVHSGGRHATALT---VDGKVFSWG 2710

Query: 181  SGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIG 240
             G++G         K    S  + D+     P L+      RI  +A G  H+ AL+  G
Sbjct: 2711 EGDDG---------KLGHFSRMNCDK-----PRLIEALKTKRIRDIACGSSHSAALTSSG 2756

Query: 241  QVWGWGYGGEGQLGLGS-----RIRMVSSPHPIPCIESSYGKDRSAALS---RGSVNSEG 292
            +++ WG G  G+LG G      + +MV        I+ + G   +  L+    G V S G
Sbjct: 2757 ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 2816

Query: 293  PG-------------------FRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCG 333
             G                    R+ G  V  I CG + S  +T +G + T+G G Y + G
Sbjct: 2817 DGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 2876

Query: 334  QGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAET 393
             GS      P  V  L G +I  VA G  H + ++  G VYA+G N  GQ G G      
Sbjct: 2877 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 2936

Query: 394  LPRLLDAPSLENVHSKSVSCGARHT 418
             P L+    LE      V+CG+ H+
Sbjct: 2937 KPTLVQG--LEGQKITRVACGSSHS 2959



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 121/268 (45%), Gaps = 42/268 (15%)

Query: 233  TLALSDIGQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAALSRG---- 286
            TL+    G ++GWG+   GQLG   G+++++     P PC   +    R   L  G    
Sbjct: 3583 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKV-----PTPC--EALATLRPVQLIGGEQTL 3635

Query: 287  -SVNSEGPGF-------------------------RVPGNYVKGIAC--GGRHSAVITDA 318
             +V ++G  +                          +   ++K +A   GG+H   ++  
Sbjct: 3636 FAVTADGKLYATGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSE 3695

Query: 319  GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            G + ++G    G+ G GS      P  + SL GI++  VAAG  H+ C+++ GD+Y +G 
Sbjct: 3696 GEVYSWGEAEDGKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGK 3755

Query: 379  NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
             ++G+LG    + +  P+L++A     V   +   G   T  + DD  V+ WG   YG+L
Sbjct: 3756 GRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKL 3815

Query: 439  GLGDVIDRNIPSQV-TIEGCVPRNVACG 465
            G G      +P+++ ++ G     V CG
Sbjct: 3816 GRGGSDGCKVPTKIDSLTGLGVVKVECG 3843



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 121/276 (43%), Gaps = 48/276 (17%)

Query: 205  DENLSAFPCLVTLNP---------GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG- 254
            +E+L+A P L + N          G  I   AAG   T  +    +V+ WG   + QLG 
Sbjct: 2555 EEDLAAVPFLASDNEEEEDEKGGSGSLIRKKAAGLESTATIR--TKVFVWGLNDKDQLGG 2612

Query: 255  -LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSA 313
              GS+I++            S+ +  SA                  N V+ +A G +   
Sbjct: 2613 LKGSKIKV-----------PSFSETLSAL-----------------NVVQ-VAGGSKSLF 2643

Query: 314  VITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVA--AGLWHTICISSD 370
             +T  G +   G    G+ G G +   +  P  +++L    ++ VA  +G  H   ++ D
Sbjct: 2644 AVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVD 2703

Query: 371  GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
            G V+++G    G+LG         PRL++A  L+    + ++CG+ H+A +   G+++ W
Sbjct: 2704 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEA--LKTKRIRDIACGSSHSAALTSSGELYTW 2761

Query: 431  GWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACG 465
            G  +YG+LG GD   +  P  V +  G     VACG
Sbjct: 2762 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 2797



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 92/217 (42%), Gaps = 38/217 (17%)

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
           SS DE   A P LV    G+++  VA  +G   TLA+++ GQVW WG G  G+LG G   
Sbjct: 276 SSEDE---AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG--- 329

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITD 317
                                     GS   + P    ++    V  + CG + S  +T 
Sbjct: 330 --------------------------GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTK 363

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
            G + ++G G   + G G+ +    P  +  L G ++  VAAG  H + ++ D +V+++G
Sbjct: 364 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 423

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
            N   Q         T P     P L+  H   ++CG
Sbjct: 424 SND--QCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 458



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 82/310 (26%), Positives = 121/310 (39%), Gaps = 47/310 (15%)

Query: 57   AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEG 116
            A A++   K+ +WG  DD G+    S  + + P          I   A G +H  A+T  
Sbjct: 2697 ATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 2755

Query: 117  GEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGT 176
            GE+YTWG  E    GR  G     T L   + +        QV+  S+ +++   T  G 
Sbjct: 2756 GELYTWGLGE---YGR-LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 2811

Query: 177  DGR-GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLA 235
                G G+ G   R              G E  +    +  LN G  +  +  G + +LA
Sbjct: 2812 VFSWGDGDFGKLGR-------------GGSEGCNVPQNIERLN-GQGVCQIECGAQFSLA 2857

Query: 236  LSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF 295
            L+  G VW WG G   +LG GS +  V  P  +                         G 
Sbjct: 2858 LTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQVVE------------------------GL 2892

Query: 296  RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
            R  G  +  +A G  H   +TD+G +  +G   +GQ G G+T     P  V  L G +I 
Sbjct: 2893 R--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKIT 2950

Query: 356  GVAAGLWHTI 365
             VA G  H++
Sbjct: 2951 RVACGSSHSV 2960



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 80/323 (24%), Positives = 121/323 (37%), Gaps = 67/323 (20%)

Query: 58   MAISDSRKLITWGSTDD--LGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTE 115
            +A+S   ++ +WG  +D  LG    +      + E         +V  AAG AH   VT 
Sbjct: 3690 LALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIESL---RGIEVVDVAAGGAHSACVTA 3746

Query: 116  GGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG---- 171
             G++YTWG       GR +G L        D  ++    L E +     V  + G     
Sbjct: 3747 AGDLYTWG------KGR-YGRLG-----HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQ 3794

Query: 172  TSSGTDGR-----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATV 226
            T   TD       G G+ G   R              G  +    P  +    G+ +  V
Sbjct: 3795 TLCLTDDDTVWSWGDGDYGKLGR--------------GGSDGCKVPTKIDSLTGLGVVKV 3840

Query: 227  AAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRG 286
              G + ++AL+  G V+ WG G   +LG GS    V  P  +  ++              
Sbjct: 3841 ECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD-DHVRRPRQVQGLQ-------------- 3885

Query: 287  SVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCV 346
                        G  V  IA G  H    T+ G + T+G    GQ G G+T+    P  V
Sbjct: 3886 ------------GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 3933

Query: 347  SSLLGIQIEGVAAGLWHTICISS 369
            ++L G ++  VA G  HT+  S+
Sbjct: 3934 AALQGKKVNRVACGSAHTLAWST 3956



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 5/73 (6%)

Query: 53   GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
            G  F++A++ S  + TWG  D   LG     S  H   P          ++  A G  HC
Sbjct: 3843 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRRPRQVQGLQGKKVIAIATGSLHC 3899

Query: 111  VAVTEGGEVYTWG 123
            V  TE GEVYTWG
Sbjct: 3900 VCCTEDGEVYTWG 3912


>gi|351699519|gb|EHB02438.1| Putative E3 ubiquitin-protein ligase HERC2 [Heterocephalus glaber]
          Length = 4833

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 127/255 (49%), Gaps = 29/255 (11%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           V+IA   + G H LAL+  G+V+ WG G  G+LG G  +     P   P + S++   + 
Sbjct: 497 VKIAA-HSDGHHYLALAATGEVFSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQG 550

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                             G +V  IACG  +SA IT  G L T+G G YG+ G GS++DE
Sbjct: 551 ------------------GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 592

Query: 341 LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
             P  V+ L G+++  VA  +G   T+ ++ +G V+++G   +G+LG GG      P+L+
Sbjct: 593 AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLI 652

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGC 457
           +   L+++    V CG++ +  +  DG+V+ WG     +LG G       P  +  + G 
Sbjct: 653 E--KLQDLEVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPRLLEGLHGK 710

Query: 458 VPRNVACGWWHTLLL 472
              +VA G  H L L
Sbjct: 711 KVIDVAAGSTHCLAL 725



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 127/303 (41%), Gaps = 80/303 (26%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GGRH  AL+  G+V+ WG G +G+LG  SR+     P  I  + +   +D  
Sbjct: 3050 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALRAKRIRD-- 3106

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                    IACG  HSA +T +G L T+G G YG+ G G    +
Sbjct: 3107 ------------------------IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ 3142

Query: 341  LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V  LLG ++  VA G     T+ ++ +G V+++G   FG+LG GG +   +P+ +
Sbjct: 3143 LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNI 3202

Query: 399  DAPSLE------------------------------------NVHSKS------------ 410
            +  + +                                    +VH +             
Sbjct: 3203 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI 3262

Query: 411  --VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWW 467
              V+ GA H   + D G+V+ WG N +GQ G G       P+ V  +EG     VACG  
Sbjct: 3263 VHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3322

Query: 468  HTL 470
            H++
Sbjct: 3323 HSV 3325



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 105/359 (29%), Positives = 145/359 (40%), Gaps = 70/359 (19%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V   +G  HC+A++  GEVY+WG  E        G L  G+    D        + E + 
Sbjct: 4046 VAVNSGGKHCLALSSEGEVYSWGEAE-------DGKLGHGSRSPCD-----RPRVVESLR 4093

Query: 161  PRSQVSRSSGGTSSG-TDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
                V  ++GG  S      G      K R   L    +E            P LV +  
Sbjct: 4094 GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLK--------PKLVEVLQ 4145

Query: 220  GVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPC-IESSYG 276
            G R+  VA  +G   TL L+D   VW WG G  G+LG G      S    +P  IES   
Sbjct: 4146 GHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG-----SDGCKVPMKIES--- 4197

Query: 277  KDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGS 336
                                + G  V  + CG + S  +T +GA+ T+G G Y + G GS
Sbjct: 4198 --------------------LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS 4237

Query: 337  TDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPR 396
             D    P  V  L G ++  +A G  H +C + DG+VY +G N  GQLG G   A   PR
Sbjct: 4238 DDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPR 4297

Query: 397  LLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
            L+ A  L+      V+CG+ HT           W  +K    G        +P+QV +E
Sbjct: 4298 LVAA--LQGKKVNRVACGSAHT---------LAWSTSKPSSAG-------KLPAQVPME 4338



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 110/389 (28%), Positives = 162/389 (41%), Gaps = 60/389 (15%)

Query: 65   KLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGW 124
            K+  WG  +D  Q     G   ++P      +  ++V+ A G     AVT  G+VY  G 
Sbjct: 2963 KVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3021

Query: 125  KECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG---TSSGTDGR-- 179
                 +GR+   LS+GT        RQ + L+  V  +  V+  SGG   T+   DG+  
Sbjct: 3022 ---ATNGRLGLGLSSGTV----PIPRQITALSSYVVKK--VAVHSGGRHATALTVDGKVF 3072

Query: 180  --GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS 237
              G G++G         K    S  + D+     P L+      RI  +A G  H+ AL+
Sbjct: 3073 SWGEGDDG---------KLGHFSRMNCDK-----PRLIEALRAKRIRDIACGSSHSAALT 3118

Query: 238  DIGQVWGWGYGGEGQLGLGS-----RIRMVSSPHPIPCIESSYGKDRSAALS---RGSVN 289
              G+++ WG G  G+LG G      + +MV        I+ + G   +  L+    G V 
Sbjct: 3119 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 3178

Query: 290  SEGPG-------------------FRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
            S G G                    R+ G  V  I CG + S  +T +G + T+G G Y 
Sbjct: 3179 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 3238

Query: 331  QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            + G GS      P  V  L G +I  VA G  H + ++  G VYA+G N  GQ G G   
Sbjct: 3239 RLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTT 3298

Query: 391  AETLPRLLDAPSLENVHSKSVSCGARHTA 419
                P L+    LE      V+CG+ H+ 
Sbjct: 3299 VNRKPTLVQG--LEGQKITRVACGSSHSV 3325



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 123/270 (45%), Gaps = 46/270 (17%)

Query: 233  TLALSDIGQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAALSRG---- 286
            TL+    G ++GWG+   GQLG   G+++++     P PC   +    R   L  G    
Sbjct: 3949 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKV-----PTPC--EALATLRPVQLIGGEQTL 4001

Query: 287  -SVNSEGPGF-------------------------RVPGNYVKGIAC--GGRHSAVITDA 318
             +V ++G  +                          +   +++ +A   GG+H   ++  
Sbjct: 4002 FAVTADGKLYATGYGAGGRLGIGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSE 4061

Query: 319  GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            G + ++G    G+ G GS      P  V SL GI++  VAAG  H+ C+++ GD+Y +G 
Sbjct: 4062 GEVYSWGEAEDGKLGHGSRSPCDRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGK 4121

Query: 379  NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGA--RHTAVIADDGKVFCWGWNKYG 436
             ++G+LG    + +  P+L++   L+      V+CG+    T  + DD  V+ WG   YG
Sbjct: 4122 GRYGRLGHSDSEDQLKPKLVEV--LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYG 4179

Query: 437  QLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
            +LG G      +P ++ ++ G     V CG
Sbjct: 4180 KLGRGGSDGCKVPMKIESLTGLGVVKVECG 4209



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 58/223 (26%), Positives = 101/223 (45%), Gaps = 37/223 (16%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G  +  +A G  ++ A++  G+++ WG G  G+LG GS     S    IP + +      
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS-----SEDEAIPMLVAG----- 600

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGG--RHSAVITDAGALLTFGWGLYGQCGQGST 337
                            + G  V  +ACG     +  +T+ G + ++G G YG+ G+G +
Sbjct: 601 -----------------LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS 643

Query: 338 DDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
           D   +P  +  L  +++  V  G   ++ ++ DG VY++G     +LG G ++    PRL
Sbjct: 644 DGCKTPKLIEKLQDLEVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPRL 703

Query: 398 LDAPSLENVHSKS---VSCGARHTAVIADDGKVFCWGWNKYGQ 437
                LE +H K    V+ G+ H   + +D +V  WG N   Q
Sbjct: 704 -----LEGLHGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 92/217 (42%), Gaps = 38/217 (17%)

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
           SS DE   A P LV    G+++  VA  +G   TLA+++ GQVW WG G  G+LG G   
Sbjct: 588 SSEDE---AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG--- 641

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITD 317
                                     GS   + P    ++    V  + CG + S  +T 
Sbjct: 642 --------------------------GSDGCKTPKLIEKLQDLEVVKVRCGSQFSVALTK 675

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
            G + ++G G   + G G+ +    P  +  L G ++  VAAG  H + ++ D +V+++G
Sbjct: 676 DGQVYSWGKGDNQRLGHGTEEHVRYPRLLEGLHGKKVIDVAAGSTHCLALTEDSEVHSWG 735

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
            N   Q         T P     P L+  H   ++CG
Sbjct: 736 SND--QCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 770



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 82/168 (48%), Gaps = 6/168 (3%)

Query: 302  VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVA-- 358
            V  +A G +    +T  G +   G    G+ G G +   +  P  +++L    ++ VA  
Sbjct: 2997 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVH 3056

Query: 359  AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
            +G  H   ++ DG V+++G    G+LG         PRL++A   + +  + ++CG+ H+
Sbjct: 3057 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALRAKRI--RDIACGSSHS 3114

Query: 419  AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACG 465
            A +   G+++ WG  +YG+LG GD   +  P  V +  G     VACG
Sbjct: 3115 AALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3162



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 80/323 (24%), Positives = 121/323 (37%), Gaps = 67/323 (20%)

Query: 58   MAISDSRKLITWGSTDD--LGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTE 115
            +A+S   ++ +WG  +D  LG    +      + E         +V  AAG AH   VT 
Sbjct: 4056 LALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVVESL---RGIEVVDVAAGGAHSACVTA 4112

Query: 116  GGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG---- 171
             G++YTWG       GR +G L        D  ++    L E +     V  + G     
Sbjct: 4113 AGDLYTWG------KGR-YGRLG-----HSDSEDQLKPKLVEVLQGHRVVDVACGSGDAQ 4160

Query: 172  TSSGTDGR-----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATV 226
            T   TD       G G+ G   R              G  +    P  +    G+ +  V
Sbjct: 4161 TLCLTDDDTVWSWGDGDYGKLGR--------------GGSDGCKVPMKIESLTGLGVVKV 4206

Query: 227  AAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRG 286
              G + ++AL+  G V+ WG G   +LG GS    V  P  +  ++              
Sbjct: 4207 ECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD-DHVRRPRQVQGLQ-------------- 4251

Query: 287  SVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCV 346
                        G  V  IA G  H    T+ G + T+G    GQ G G+T+    P  V
Sbjct: 4252 ------------GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4299

Query: 347  SSLLGIQIEGVAAGLWHTICISS 369
            ++L G ++  VA G  HT+  S+
Sbjct: 4300 AALQGKKVNRVACGSAHTLAWST 4322



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 5/73 (6%)

Query: 53   GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
            G  F++A++ S  + TWG  D   LG     S  H   P          ++  A G  HC
Sbjct: 4209 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRRPRQVQGLQGKKVIAIATGSLHC 4265

Query: 111  VAVTEGGEVYTWG 123
            V  TE GEVYTWG
Sbjct: 4266 VCCTEDGEVYTWG 4278



 Score = 40.0 bits (92), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
           G  F++A++   ++ +WG  D+    + T  +H   P          ++  AAG  HC+A
Sbjct: 666 GSQFSVALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPRLLEGLHGKKVIDVAAGSTHCLA 724

Query: 113 VTEGGEVYTWG 123
           +TE  EV++WG
Sbjct: 725 LTEDSEVHSWG 735


>gi|159036719|ref|YP_001535972.1| chromosome condensation regulator RCC1 [Salinispora arenicola
           CNS-205]
 gi|157915554|gb|ABV96981.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
           CNS-205]
          Length = 553

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 85/286 (29%), Positives = 119/286 (41%), Gaps = 43/286 (15%)

Query: 203 SGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR-- 260
           +G    S+ P  V+L  G R   VAAG  H+LAL+  G +  WG    GQLG GS     
Sbjct: 121 NGSTTSSSTPVAVSLPTGTRAVAVAAGADHSLALTSAGTILAWGDNTFGQLGDGSTTDRS 180

Query: 261 ---MVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRV-------------------- 297
               VS P        + G+D +  L+     S GP                        
Sbjct: 181 TPVAVSLPAGTTVAAIAAGRDHNLVLT-----STGPTLLTWGKNTRGQLGDGTTTGRDTP 235

Query: 298 ------PGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                 PG  V  +A G  HS V+T     L +G   +GQ G G+T D L P  V+   G
Sbjct: 236 VAVTLPPGVTVTSVAGGRDHSLVLTSDDTALAWGGNSFGQLGNGTTTDSLVPIAVALPTG 295

Query: 352 IQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSV 411
            +   +AAG  H+  ++S+G  +A+G N  GQLG G     + P  +  P+     ++  
Sbjct: 296 TEATAIAAGRLHSAALTSEGAAFAWGHNGRGQLGNGSTTDSSEPVAVSLPA----DTRLT 351

Query: 412 SCGAR---HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI 454
           +   R   H   I   G    WG N  G+LG G   DR+ P  V++
Sbjct: 352 AIAGRDSDHNVTITSAGAALAWGANANGELGDGSTTDRSTPVAVSL 397



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 69/204 (33%), Positives = 103/204 (50%), Gaps = 7/204 (3%)

Query: 274 SYGKDRSAALSRGSV--NSEGPGFRVP-GNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
           ++G++    L  G++  +SE     +P G  V  +A G RH   +T AG +L +G  + G
Sbjct: 58  AWGENDGGQLGNGTMIDSSEPVAVSLPAGTAVAAVAVGDRHGLALTSAGTVLAWGRNIEG 117

Query: 331 QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
           Q G GST    +P  VS   G +   VAAG  H++ ++S G + A+G N FGQLG G   
Sbjct: 118 QLGNGSTTSSSTPVAVSLPTGTRAVAVAAGADHSLALTSAGTILAWGDNTFGQLGDGSTT 177

Query: 391 AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDG-KVFCWGWNKYGQLGLGDVIDRNIP 449
             + P  +  P+   V   +++ G  H  V+   G  +  WG N  GQLG G    R+ P
Sbjct: 178 DRSTPVAVSLPAGTTV--AAIAAGRDHNLVLTSTGPTLLTWGKNTRGQLGDGTTTGRDTP 235

Query: 450 SQVTI-EGCVPRNVACGWWHTLLL 472
             VT+  G    +VA G  H+L+L
Sbjct: 236 VAVTLPPGVTVTSVAGGRDHSLVL 259



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 133/348 (38%), Gaps = 51/348 (14%)

Query: 58  MAISDSRKLITWGSTDD--LGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTE 115
           +A++ +  ++ WG   +  LG    TS      P    LPT    V  AAG  H +A+T 
Sbjct: 100 LALTSAGTVLAWGRNIEGQLGNGSTTSSS---TPVAVSLPTGTRAVAVAAGADHSLALTS 156

Query: 116 GGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSG 175
            G +  WG          FG L  G+  D+      S+ +   +   + V+  + G    
Sbjct: 157 AGTILAWG-------DNTFGQLGDGSTTDR------STPVAVSLPAGTTVAAIAAGRDHN 203

Query: 176 TDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLA 235
                +G        ++  K T      G       P  VTL PGV + +VA G  H+L 
Sbjct: 204 LVLTSTGPT-----LLTWGKNTRGQLGDGTTTGRDTPVAVTLPPGVTVTSVAGGRDHSLV 258

Query: 236 LSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF 295
           L+       WG    GQLG G+      S  PI           + AL  G+        
Sbjct: 259 LTSDDTALAWGGNSFGQLGNGT---TTDSLVPI-----------AVALPTGT-------- 296

Query: 296 RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
                    IA G  HSA +T  GA   +G    GQ G GST D   P  VS     ++ 
Sbjct: 297 -----EATAIAAGRLHSAALTSEGAAFAWGHNGRGQLGNGSTTDSSEPVAVSLPADTRLT 351

Query: 356 GVAA-GLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPS 402
            +A     H + I+S G   A+G N  G+LG G     + P  +  P+
Sbjct: 352 AIAGRDSDHNVTITSAGAALAWGANANGELGDGSTTDRSTPVAVSLPA 399


>gi|27085405|gb|AAN85438.1| inositol 5-phosphatase 2 [Dictyostelium discoideum]
          Length = 1800

 Score =  106 bits (264), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 84/291 (28%), Positives = 133/291 (45%), Gaps = 67/291 (23%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
           R+ +V+ G  HTL L+   +++  G+   GQLG+ +   +V S  P+P            
Sbjct: 75  RVVSVSCGFNHTLLLTSEYKIFSMGFNQTGQLGIEN---VVDSAVPLPV----------D 121

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL 341
            LS+              N +K I  G   SA IT+AG L  +G   YGQ G G  + +L
Sbjct: 122 TLSKF-------------NVIK-IKAGNNVSAAITEAGDLYCWGSSAYGQLGNGKMNAKL 167

Query: 342 SPNCVSSLLG---------------IQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
                +++L                +Q   +  G  HTI IS+ G ++++G NQ+GQLG 
Sbjct: 168 HSFTPTTILNPLIPDAEKDDPIYQNLQYTNICFGAQHTIAISTTGAIFSWGSNQYGQLGL 227

Query: 387 GGDQAETLP-----------RLLDAPSLENVHSKS------------VSCGARHTAVIAD 423
           G   A+ +P           R     SL  + +              ++CG  H+A++  
Sbjct: 228 GHCNAKLVPVPIHLDNSFERRAGHINSLGEIVTTDFTAKTIHRIVVDIACGNFHSALLTL 287

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLL 472
           +G +F WG N+YGQLG GD +D+++P  V  ++E      +A G  HT+LL
Sbjct: 288 EGDLFLWGSNQYGQLGQGDSLDQSVPKTVKGSLEFVKINRMALGNNHTILL 338



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 62/189 (32%), Positives = 96/189 (50%), Gaps = 10/189 (5%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS-RIRMVSSPHPIPC-IESSYGKD 278
           ++   +  G +HT+A+S  G ++ WG    GQLGLG    ++V    P+P  +++S+ + 
Sbjct: 193 LQYTNICFGAQHTIAISTTGAIFSWGSNQYGQLGLGHCNAKLV----PVPIHLDNSFERR 248

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
                S G + +     +     V  IACG  HSA++T  G L  +G   YGQ GQG + 
Sbjct: 249 AGHINSLGEIVTTDFTAKTIHRIVVDIACGNFHSALLTLEGDLFLWGSNQYGQLGQGDSL 308

Query: 339 DELSPNCVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLG---TGGDQAETL 394
           D+  P  V  SL  ++I  +A G  HTI ++ + DV+ FG N+F QLG    GG      
Sbjct: 309 DQSVPKTVKGSLEFVKINRMALGNNHTILLTKEQDVFTFGSNEFYQLGHGSIGGKNRLYF 368

Query: 395 PRLLDAPSL 403
           P  +  P +
Sbjct: 369 PTQIQKPKV 377



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 71/288 (24%), Positives = 124/288 (43%), Gaps = 51/288 (17%)

Query: 199 ESSSSGDENL--SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLG 256
           ++   G EN+  SA P  V       +  + AG   + A+++ G ++ WG    GQLG G
Sbjct: 102 QTGQLGIENVVDSAVPLPVDTLSKFNVIKIKAGNNVSAAITEAGDLYCWGSSAYGQLGNG 161

Query: 257 SRIRMVSSPHPI----PCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHS 312
                + S  P     P I  +   D              P ++        I  G +H+
Sbjct: 162 KMNAKLHSFTPTTILNPLIPDAEKDD--------------PIYQ--NLQYTNICFGAQHT 205

Query: 313 AVITDAGALLTFGWGLYGQCGQGSTDDELSP----------------NCVSSLLGIQIEG 356
             I+  GA+ ++G   YGQ G G  + +L P                N +  ++      
Sbjct: 206 IAISTTGAIFSWGSNQYGQLGLGHCNAKLVPVPIHLDNSFERRAGHINSLGEIVTTDFTA 265

Query: 357 ---------VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVH 407
                    +A G +H+  ++ +GD++ +G NQ+GQLG G    +++P+ +   SLE V 
Sbjct: 266 KTIHRIVVDIACGNFHSALLTLEGDLFLWGSNQYGQLGQGDSLDQSVPKTVKG-SLEFVK 324

Query: 408 SKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN---IPSQV 452
              ++ G  HT ++  +  VF +G N++ QLG G +  +N    P+Q+
Sbjct: 325 INRMALGNNHTILLTKEQDVFTFGSNEFYQLGHGSIGGKNRLYFPTQI 372


>gi|297839563|ref|XP_002887663.1| zinc finger protein [Arabidopsis lyrata subsp. lyrata]
 gi|297333504|gb|EFH63922.1| zinc finger protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1103

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 107/412 (25%), Positives = 175/412 (42%), Gaps = 63/412 (15%)

Query: 74  DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRV 133
           D   SY+T+     +P+P        + + A G  H   VT  GE++TWG +     GR+
Sbjct: 257 DKNASYLTTRTDVLVPKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEES---GGRL 313

Query: 134 FGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEE---GSKRRR 190
                 G G+ KDVF  +   L E ++  S V   + G         +GE    G     
Sbjct: 314 ------GHGIGKDVFHPR---LVESLTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHN 364

Query: 191 ISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGE 250
           + L    ++ S    + ++   CL     G+ +A+V  G  HT  ++  G+++ +G G  
Sbjct: 365 VGLLGHGSDISHWIPKRIAG--CL----EGLHVASVTCGPWHTALITSYGRLFTFGDGTF 418

Query: 251 GQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGR 310
           G LG G R   V  P  +  +                      G R        ++CG  
Sbjct: 419 GVLGHGDR-ETVQYPREVESLS---------------------GLRTIA-----VSCGVW 451

Query: 311 HSAVITD------------AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
           H+A + +            +G L T+G G   + G G  D  L P CV +L+      +A
Sbjct: 452 HTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIA 511

Query: 359 AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
            G   T+ +++ G V+  G   +GQLG      + LP L++   L +   + +SCGA H 
Sbjct: 512 CGHSLTVGLTTSGQVFTMGSTVYGQLGNLQTDGK-LPCLVE-DKLASEFVEEISCGAYHV 569

Query: 419 AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
           A +    +V+ WG    G+LG GD+ DR +P+ V  ++    + +ACG  +T
Sbjct: 570 AALTSRNEVYTWGKGANGRLGHGDLEDRKVPTLVEALKDRHVKYIACGSNYT 621



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 80/288 (27%), Positives = 119/288 (41%), Gaps = 66/288 (22%)

Query: 212 PCLV-TLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGE--GQLGLGSRIRMVSSPHPI 268
           P LV +L     +  VA G  HT A++  G+++ WG G    G LG GS I      H I
Sbjct: 324 PRLVESLTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDI-----SHWI 378

Query: 269 P-----CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLT 323
           P     C+E                          G +V  + CG  H+A+IT  G L T
Sbjct: 379 PKRIAGCLE--------------------------GLHVASVTCGPWHTALITSYGRLFT 412

Query: 324 FGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI------------SSDG 371
           FG G +G  G G  +    P  V SL G++   V+ G+WHT  +             S G
Sbjct: 413 FGDGTFGVLGHGDRETVQYPREVESLSGLRTIAVSCGVWHTAAVVEIIVTQSNSSSVSSG 472

Query: 372 DVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWG 431
            ++ +G     +LG G       P  +  P+L + +   ++CG   T  +   G+VF  G
Sbjct: 473 KLFTWGDGDKNRLGHGDKDPRLKPTCV--PALIDYNFHKIACGHSLTVGLTTSGQVFTMG 530

Query: 432 WNKYGQLG-------LGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
              YGQLG       L  +++  + S+   E      ++CG +H   L
Sbjct: 531 STVYGQLGNLQTDGKLPCLVEDKLASEFVEE------ISCGAYHVAAL 572


>gi|348534545|ref|XP_003454762.1| PREDICTED: hypothetical protein LOC100691941 [Oreochromis
           niloticus]
          Length = 1536

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 143/299 (47%), Gaps = 44/299 (14%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLG--------SRIRMVS 263
           P  V      ++  VA G  HTL  +  G+V+  G   EGQLGLG         R+    
Sbjct: 79  PTCVKALKSEKVQLVACGRNHTLICTAKGKVYASGGNSEGQLGLGDCEERTSFKRLDFFD 138

Query: 264 SPHPIPCIESSYGKDRSAALS-RGSV-----NSEG------------PGFRVPGNYVKGI 305
           S  PI  +  + G + SAAL+  G +     N+EG            P     G  +  +
Sbjct: 139 SQGPIKML--AAGSNTSAALTVSGKLFMWGDNTEGQIGLGKESQVSSPQEVSVGQPISWV 196

Query: 306 ACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD--DELSPNCVSSLLGIQIEGVAAGLWH 363
           +CG  HSA++T  GAL TFG    G+ G G+        P  V S+    +  VA G  H
Sbjct: 197 SCGYYHSALVTVDGALYTFGERDSGKLGLGTHQLPGHRVPQLVKSIKE-PVRQVACGGGH 255

Query: 364 TICISSDGDVYAFGGNQFGQLGTGGDQAET-LPRLLDAPSLENVHSKSVSCGARHTAVIA 422
           T+ ++ +G+VY FG  QFGQLG G    E+ +PRL++    +   +  V CG  HTAVI 
Sbjct: 256 TVALA-EGNVYTFGLGQFGQLGHGTFIFESRVPRLVE--HFKKGRACQVVCGENHTAVIT 312

Query: 423 DDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC---VPRNVA---CGWWHTLLLAVP 475
           +DG ++ +G  ++G+LGLG   + N  +Q     C   +  NV    CG  H ++LA P
Sbjct: 313 EDGLLYTFGDGRHGKLGLG---EENFTNQFKPTLCLRFLKYNVQGAMCGGCHMVVLARP 368



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/170 (37%), Positives = 94/170 (55%), Gaps = 2/170 (1%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           IACG  H+A+IT+ G L  FG   +GQ G GS      P CV +L   +++ VA G  HT
Sbjct: 41  IACGDEHTALITENGKLFMFGSNNWGQLGLGSKVTVNKPTCVKALKSEKVQLVACGRNHT 100

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           +  ++ G VYA GGN  GQLG G  +  T  + LD    +    K ++ G+  +A +   
Sbjct: 101 LICTAKGKVYASGGNSEGQLGLGDCEERTSFKRLDFFDSQGP-IKMLAAGSNTSAALTVS 159

Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAV 474
           GK+F WG N  GQ+GLG     + P +V++ G     V+CG++H+ L+ V
Sbjct: 160 GKLFMWGDNTEGQIGLGKESQVSSPQEVSV-GQPISWVSCGYYHSALVTV 208



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 132/287 (45%), Gaps = 56/287 (19%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSY------GKDR 279
           +A G  HT  +++ G+++ +G    GQLGLGS++  V+ P  +  ++S        G++ 
Sbjct: 41  IACGDEHTALITENGKLFMFGSNNWGQLGLGSKV-TVNKPTCVKALKSEKVQLVACGRNH 99

Query: 280 S-AALSRGSV-----NSEGP----------GFRVPGNY-----VKGIACGGRHSAVITDA 318
           +    ++G V     NSEG            F+    +     +K +A G   SA +T +
Sbjct: 100 TLICTAKGKVYASGGNSEGQLGLGDCEERTSFKRLDFFDSQGPIKMLAAGSNTSAALTVS 159

Query: 319 GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           G L  +G    GQ G G      SP  VS  +G  I  V+ G +H+  ++ DG +Y FG 
Sbjct: 160 GKLFMWGDNTEGQIGLGKESQVSSPQEVS--VGQPISWVSCGYYHSALVTVDGALYTFGE 217

Query: 379 NQFGQLGTGGDQ--AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYG 436
              G+LG G  Q     +P+L+ +   E V  + V+CG  HT  +A +G V+ +G  ++G
Sbjct: 218 RDSGKLGLGTHQLPGHRVPQLVKSIK-EPV--RQVACGGGHTVALA-EGNVYTFGLGQFG 273

Query: 437 QLGLGDVIDRNIPSQVTIEGCVPR-----------NVACGWWHTLLL 472
           QLG G  I          E  VPR            V CG  HT ++
Sbjct: 274 QLGHGTFI---------FESRVPRLVEHFKKGRACQVVCGENHTAVI 311



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 13/106 (12%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           I   G V+ FG ++F         A+ +P       L+N     ++CG  HTA+I ++GK
Sbjct: 9   IPESGAVFTFGKSKF---------ADNIPSKF---WLKNDIPLRIACGDEHTALITENGK 56

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLL 471
           +F +G N +GQLGLG  +  N P+ V  ++    + VACG  HTL+
Sbjct: 57  LFMFGSNNWGQLGLGSKVTVNKPTCVKALKSEKVQLVACGRNHTLI 102


>gi|340375548|ref|XP_003386296.1| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Amphimedon
            queenslandica]
          Length = 4694

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 82/287 (28%), Positives = 140/287 (48%), Gaps = 33/287 (11%)

Query: 214  LVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES 273
            L T    V+   + +GG+H LA++  G+++ WG G +G+LGLG+ + M + PH I  ++S
Sbjct: 3916 LATRGIAVKKIAIHSGGKHCLAVTTQGELYAWGEGEDGKLGLGTTVNM-NVPHLIESLKS 3974

Query: 274  SY------GKDRSAALSR-GSVNSEGPGFR-------------------VPGNYVKGIAC 307
             +      G   SA ++  GS+ + G G                     + G  V  +AC
Sbjct: 3975 KHVIDAGCGSSHSACITDDGSLYTWGKGRYGRLGHNDHETQHKPKLVSALKGEQVTCVAC 4034

Query: 308  GGRHSAVI--TDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTI 365
            G   +  +  T +G + ++G G YG+ G+G  +    P  + SL G  +  +  G   ++
Sbjct: 4035 GSGDAQTLCATASGCVFSWGDGDYGKLGRGGNEGSKVPKKIDSLTGKHVIKLLCGSQFSM 4094

Query: 366  CISSDGDVYAFGGNQFGQLGTGGDQAETLP-RLLDAPSLENVHSKSVSCGARHTAVIADD 424
             +++ G VY +G   + +LG G D  +  P R+L   + ENV    + CG+ H  V  + 
Sbjct: 4095 ALTTAGHVYTWGKGDYYRLGHGDDSHQRTPRRVLGLLAHENV--IDIGCGSLHCIVCTES 4152

Query: 425  GKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACGWWHTL 470
            GKVF WG N  GQ+G       ++P ++ I +     +VACG  H++
Sbjct: 4153 GKVFSWGDNDEGQIGNDTTQAVSVPKRINITDNICIDHVACGSAHSI 4199



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 116/250 (46%), Gaps = 33/250 (13%)

Query: 227  AAGGRHTLALSDIGQVWGWGYGGEGQLGLG--SRIRMVSSPHPIPCIESSYGKDRSAALS 284
            A G + +  +SD G+V+  G G  G+LG+G  + IRM   PH I  + S Y   + A   
Sbjct: 2964 AGGSKCSFVVSDDGKVFACGEGSSGRLGIGGFANIRM---PHQISSL-SMYVVRKVA--- 3016

Query: 285  RGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN 344
                                ++C GRH   +T  G + ++G G YGQ G GS      P 
Sbjct: 3017 --------------------VSCAGRHVLAVTADGKVFSWGDGQYGQLGHGSLQSYDRPK 3056

Query: 345  CVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLE 404
             +       I  V+ G  H+  +S +G+++ +G    G+LG G    +T P+L+ A  LE
Sbjct: 3057 MIEIFQAKHIREVSCGTGHSAAVSVNGELFTWGQGADGRLGHGDSNNQTKPKLVRA--LE 3114

Query: 405  NVHSKSVSCGARHTAVIAD-DGKVFCWGWNKYGQLGLGD-VIDRNIPSQVTIEGCVPRNV 462
             V    V+CG+R+   +A  D  ++ WG   +G+LGL D     ++P QV         +
Sbjct: 3115 KVRISCVACGSRNAHTLAAGDNSLWAWGDGSFGKLGLKDGSSSTDVPVQVITFPSNIIQI 3174

Query: 463  ACGWWHTLLL 472
             CG   ++LL
Sbjct: 3175 ECGMHFSVLL 3184



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 118/253 (46%), Gaps = 45/253 (17%)

Query: 230 GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVN 289
           G H LAL+  G+V+ WG G  G LG+G+              ES       AALS     
Sbjct: 517 GNHILALTKDGKVYSWGQGSNGVLGIGN-------------TESQTAPTAVAALS----- 558

Query: 290 SEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSL 349
                    G+ +  I+ G  HSA +T+ G L T+G G YG+ G G+ +D+L P  V  L
Sbjct: 559 ---------GDRIVHISAGSMHSAAVTEDGVLYTWGKGSYGRLGHGNAEDKLIPTIVEGL 609

Query: 350 LGIQIEGV--AAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLD-----APS 402
            G++I  V   +G  HT+ +   G V+++G   +G+LG  G     +P+ +      +P 
Sbjct: 610 NGVKIVQVDCGSGDAHTLALDDTGQVWSWGDGDYGKLGRPGSDQNKVPKPISGIGSTSPV 669

Query: 403 LENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC---VP 459
           ++      + CG + +  +  DGK++ WG     QLG G+    ++     IEG    V 
Sbjct: 670 VK------IICGNQISMALTKDGKLYSWGCGDTYQLGHGN--QEHVRQPKLIEGLSETVV 721

Query: 460 RNVACGWWHTLLL 472
            +V+ G  H + L
Sbjct: 722 SDVSVGAQHCVAL 734



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 119/260 (45%), Gaps = 28/260 (10%)

Query: 214  LVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES 273
            L  LNP    A +  G +   A++D G+V+  GY   G+LG+GS    V++P P+  + +
Sbjct: 3864 LSELNP----AMITGGEQTLFAVTDDGKVYASGYAAHGRLGIGSSDN-VATPTPLTSLAT 3918

Query: 274  SYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCG 333
                 R  A+ + +++S                 GG+H   +T  G L  +G G  G+ G
Sbjct: 3919 -----RGIAVKKIAIHS-----------------GGKHCLAVTTQGELYAWGEGEDGKLG 3956

Query: 334  QGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAET 393
             G+T +   P+ + SL    +     G  H+ CI+ DG +Y +G  ++G+LG    + + 
Sbjct: 3957 LGTTVNMNVPHLIESLKSKHVIDAGCGSSHSACITDDGSLYTWGKGRYGRLGHNDHETQH 4016

Query: 394  LPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV- 452
             P+L+ A   E V   +   G   T      G VF WG   YG+LG G      +P ++ 
Sbjct: 4017 KPKLVSALKGEQVTCVACGSGDAQTLCATASGCVFSWGDGDYGKLGRGGNEGSKVPKKID 4076

Query: 453  TIEGCVPRNVACGWWHTLLL 472
            ++ G     + CG   ++ L
Sbjct: 4077 SLTGKHVIKLLCGSQFSMAL 4096



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/307 (23%), Positives = 125/307 (40%), Gaps = 83/307 (27%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            VR   V+  GRH LA++  G+V+ WG G  GQLG GS ++    P  I   ++       
Sbjct: 3012 VRKVAVSCAGRHVLAVTADGKVFSWGDGQYGQLGHGS-LQSYDRPKMIEIFQA------- 3063

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                +++ ++CG  HSA ++  G L T+G G  G+ G G ++++
Sbjct: 3064 -------------------KHIREVSCGTGHSAAVSVNGELFTWGQGADGRLGHGDSNNQ 3104

Query: 341  LSPNCVSSLLGIQIEGVAAG-------------LW------------------------- 362
              P  V +L  ++I  VA G             LW                         
Sbjct: 3105 TKPKLVRALEKVRISCVACGSRNAHTLAAGDNSLWAWGDGSFGKLGLKDGSSSTDVPVQV 3164

Query: 363  ---------------HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVH 407
                            ++ ++ +G VY +G  ++ +LG      + +P L+D  + + + 
Sbjct: 3165 ITFPSNIIQIECGMHFSVLLTKEGKVYTWGKGEYYRLGNDSTSVQPIPTLVDGLASKTI- 3223

Query: 408  SKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGW 466
               V+ GA H   +   G+V+ WG N++GQ G    I    P  V +++G     +ACG 
Sbjct: 3224 -TQVAVGALHCLALTSSGEVYSWGDNEHGQQGNNSTICNRKPQIVASLKGHRICKIACGS 3282

Query: 467  WHTLLLA 473
             H++  A
Sbjct: 3283 SHSIAFA 3289



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 117/427 (27%), Positives = 175/427 (40%), Gaps = 81/427 (18%)

Query: 14   VFMWGYLPGALPQRSPILSPLVVRLPL---TVGSAWRDVCGGGCGFAMAISDSRKLIT-- 68
            VF+WG     + Q    LS   V+ P+   T+         GG   +  +SD  K+    
Sbjct: 2926 VFVWGL--NDMRQLGTDLSEAKVKSPIESRTLARLHPIQFAGGSKCSFVVSDDGKVFACG 2983

Query: 69   WGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIV--KAAAGWA--HCVAVTEGGEVYTWGW 124
             GS+  LG      G    I  P  + + +  V  K A   A  H +AVT  G+V++WG 
Sbjct: 2984 EGSSGRLG-----IGGFANIRMPHQISSLSMYVVRKVAVSCAGRHVLAVTADGKVFSWGD 3038

Query: 125  KECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSS-GTDGR---- 179
             +       +G L  G+      ++R       Q     +VS  +G +++   +G     
Sbjct: 3039 GQ-------YGQLGHGS---LQSYDRPKMIEIFQAKHIREVSCGTGHSAAVSVNGELFTW 3088

Query: 180  GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGR--HTLALS 237
            G G +G    R+            GD N    P LV     VRI+ VA G R  HTLA  
Sbjct: 3089 GQGADG----RLG----------HGDSNNQTKPKLVRALEKVRISCVACGSRNAHTLAAG 3134

Query: 238  DIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPG--F 295
            D   +W WG G  G+LGL                     KD       GS +++ P    
Sbjct: 3135 D-NSLWAWGDGSFGKLGL---------------------KD-------GSSSTDVPVQVI 3165

Query: 296  RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
              P N ++ I CG   S ++T  G + T+G G Y + G  ST  +  P  V  L    I 
Sbjct: 3166 TFPSNIIQ-IECGMHFSVLLTKEGKVYTWGKGEYYRLGNDSTSVQPIPTLVDGLASKTIT 3224

Query: 356  GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGA 415
             VA G  H + ++S G+VY++G N+ GQ G         P+++   SL+      ++CG+
Sbjct: 3225 QVAVGALHCLALTSSGEVYSWGDNEHGQQGNNSTICNRKPQIV--ASLKGHRICKIACGS 3282

Query: 416  RHTAVIA 422
             H+   A
Sbjct: 3283 SHSIAFA 3289



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 94/347 (27%), Positives = 144/347 (41%), Gaps = 61/347 (17%)

Query: 83   GKHGEIPEPFPLPTEAS---IVKAAA---GWAHCVAVTEGGEVYTWGWKECVPSGRVFGD 136
            G    +  P PL + A+    VK  A   G  HC+AVT  GE+Y WG  E        G 
Sbjct: 3902 GSSDNVATPTPLTSLATRGIAVKKIAIHSGGKHCLAVTTQGELYAWGEGED-------GK 3954

Query: 137  LSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSG--TDGRGSGEEGSKRRRISLA 194
            L  GT ++ +V       L E +  +  +    G + S   TD  GS     K R   L 
Sbjct: 3955 LGLGTTVNMNV-----PHLIESLKSKHVIDAGCGSSHSACITDD-GSLYTWGKGRYGRLG 4008

Query: 195  KQTAESSSSGDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQ 252
                E+           P LV+   G ++  VA  +G   TL  +  G V+ WG G  G+
Sbjct: 4009 HNDHETQHK--------PKLVSALKGEQVTCVACGSGDAQTLCATASGCVFSWGDGDYGK 4060

Query: 253  LGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHS 312
            LG G               E S    +  +L+              G +V  + CG + S
Sbjct: 4061 LGRGGN-------------EGSKVPKKIDSLT--------------GKHVIKLLCGSQFS 4093

Query: 313  AVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ-IEGVAAGLWHTICISSDG 371
              +T AG + T+G G Y + G G    + +P  V  LL  + +  +  G  H I  +  G
Sbjct: 4094 MALTTAGHVYTWGKGDYYRLGHGDDSHQRTPRRVLGLLAHENVIDIGCGSLHCIVCTESG 4153

Query: 372  DVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
             V+++G N  GQ+G    QA ++P+ ++    +N+    V+CG+ H+
Sbjct: 4154 KVFSWGDNDEGQIGNDTTQAVSVPKRINIT--DNICIDHVACGSAHS 4198



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 67/220 (30%), Positives = 97/220 (44%), Gaps = 33/220 (15%)

Query: 204 GDENLSAFPCLVTLNPGVRIATV--AAGGRHTLALSDIGQVWGWGYGGEGQLGL-GSRIR 260
           G+      P +V    GV+I  V   +G  HTLAL D GQVW WG G  G+LG  GS   
Sbjct: 595 GNAEDKLIPTIVEGLNGVKIVQVDCGSGDAHTLALDDTGQVWSWGDGDYGKLGRPGSDQN 654

Query: 261 MVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA 320
            V  P PI                   + S  P        V  I CG + S  +T  G 
Sbjct: 655 KV--PKPI-----------------SGIGSTSP--------VVKIICGNQISMALTKDGK 687

Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
           L ++G G   Q G G+ +    P  +  L    +  V+ G  H + +++D DVYA+G N 
Sbjct: 688 LYSWGCGDTYQLGHGNQEHVRQPKLIEGLSETVVSDVSVGAQHCVALTTDSDVYAWGKNS 747

Query: 381 FGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
             ++   GD   + P +++A S +   +  ++CGA  T V
Sbjct: 748 SFEVNESGDIISS-PLMIEAASGKG--ALLIACGASETFV 784



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 54/169 (31%), Positives = 77/169 (45%), Gaps = 4/169 (2%)

Query: 310  RHSAVITDAGALLTFGWGLYGQCGQGSTDDEL---SPNCVSSLLGIQIEGVAAGLWHTIC 366
            R   + TD      F WGL      G+   E    SP    +L  +     A G   +  
Sbjct: 2913 RLDLLSTDTHGNKVFVWGLNDMRQLGTDLSEAKVKSPIESRTLARLHPIQFAGGSKCSFV 2972

Query: 367  ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
            +S DG V+A G    G+LG GG     +P  + + S+  V   +VSC  RH   +  DGK
Sbjct: 2973 VSDDGKVFACGEGSSGRLGIGGFANIRMPHQISSLSMYVVRKVAVSCAGRHVLAVTADGK 3032

Query: 427  VFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACGWWHTLLLAV 474
            VF WG  +YGQLG G +   + P  + I +    R V+CG  H+  ++V
Sbjct: 3033 VFSWGDGQYGQLGHGSLQSYDRPKMIEIFQAKHIREVSCGTGHSAAVSV 3081



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 71/267 (26%), Positives = 118/267 (44%), Gaps = 40/267 (14%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P  V    G RI  ++AG  H+ A+++ G ++ WG G  G+LG G+     +    IP I
Sbjct: 551 PTAVAALSGDRIVHISAGSMHSAAVTEDGVLYTWGKGSYGRLGHGN-----AEDKLIPTI 605

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGG--RHSAVITDAGALLTFGWGLY 329
                              EG    + G  +  + CG    H+  + D G + ++G G Y
Sbjct: 606 ------------------VEG----LNGVKIVQVDCGSGDAHTLALDDTGQVWSWGDGDY 643

Query: 330 GQCGQGSTDDELSPNCVSSLLGIQ-IEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGG 388
           G+ G+  +D    P  +S +     +  +  G   ++ ++ DG +Y++G     QLG G 
Sbjct: 644 GKLGRPGSDQNKVPKPISGIGSTSPVVKIICGNQISMALTKDGKLYSWGCGDTYQLGHGN 703

Query: 389 DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL-GDVIDRN 447
            +    P+L++  S E V S  VS GA+H   +  D  V+ WG N   ++   GD+I   
Sbjct: 704 QEHVRQPKLIEGLS-ETVVS-DVSVGAQHCVALTTDSDVYAWGKNSSFEVNESGDIIS-- 759

Query: 448 IPSQVTIEGCVPRN---VACGWWHTLL 471
             S + IE    +    +ACG   T +
Sbjct: 760 --SPLMIEAASGKGALLIACGASETFV 784



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 67/154 (43%), Gaps = 9/154 (5%)

Query: 323  TFGWGL--YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
             FGWG    GQ G    +   SP    SL  +    +  G      ++ DG VYA G   
Sbjct: 3836 VFGWGHNHRGQLGGIEGNKVKSPRLCESLSELNPAMITGGEQTLFAVTDDGKVYASGYAA 3895

Query: 381  FGQLGTGGDQAETLPRLLDAPSLENVHSKSVSC--GARHTAVIADDGKVFCWGWNKYGQL 438
             G+LG G       P  L + +   +  K ++   G +H   +   G+++ WG  + G+L
Sbjct: 3896 HGRLGIGSSDNVATPTPLTSLATRGIAVKKIAIHSGGKHCLAVTTQGELYAWGEGEDGKL 3955

Query: 439  GLGDVIDRNIPSQVTIEGCVPRNVA---CGWWHT 469
            GLG  ++ N+P    IE    ++V    CG  H+
Sbjct: 3956 GLGTTVNMNVPH--LIESLKSKHVIDAGCGSSHS 3987


>gi|326680004|ref|XP_003201430.1| PREDICTED: RCC1 domain-containing protein 1-like [Danio rerio]
          Length = 409

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 110/241 (45%), Gaps = 39/241 (16%)

Query: 272 ESSYGKDRSAAL---SRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL 328
           E     + +AAL   S G V  + P F         +  G  H+ ++T  G L ++G G 
Sbjct: 155 EHELSAEHTAALPLVSGGFVQHKPPFFHPLKLCAVSLVLGSEHALLLTADGTLYSWGSGS 214

Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQL---- 384
           +GQ G G       P  V +L G+ I+ VAAG WH+  +SS GD+Y +G N+ GQL    
Sbjct: 215 HGQLGHGVLTSLEDPQAVEALWGVPIKAVAAGNWHSAAVSSGGDLYMWGWNESGQLGLPS 274

Query: 385 -----------GTGGDQA----------------ETLPRLLDAPSLENVHSKSVSCGARH 417
                      G+G D                  +  P L+D  ++  +    +SCG+RH
Sbjct: 275 RGLEEEKRRGNGSGNDDQPINTDGKSRTDVFISIQAFPALVDIANMSEI--SRISCGSRH 332

Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV---TIEGCVPRNVACGWWHTLLLAV 474
           TA +   G ++ WGW +YGQLG G     + P+ V   +      ++V CG W+T +  V
Sbjct: 333 TAAVTSAGDLYTWGWGQYGQLGHGTEHSTDEPTPVDYFSSHSLSVKDVVCGSWNTFVSVV 392

Query: 475 P 475
           P
Sbjct: 393 P 393



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 67/255 (26%), Positives = 100/255 (39%), Gaps = 57/255 (22%)

Query: 22  GALPQRSPILSPL-VVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTD--DLGQS 78
           G +  + P   PL +  + L +GS            A+ ++    L +WGS     LG  
Sbjct: 172 GFVQHKPPFFHPLKLCAVSLVLGSE----------HALLLTADGTLYSWGSGSHGQLGHG 221

Query: 79  YVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLS 138
            +TS    E P+         I   AAG  H  AV+ GG++Y WGW E   SG++     
Sbjct: 222 VLTSL---EDPQAVEALWGVPIKAVAAGNWHSAAVSSGGDLYMWGWNE---SGQL----- 270

Query: 139 TGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTA 198
              GL     E +                   G  SG D +    +G  R  + ++ Q  
Sbjct: 271 ---GLPSRGLEEEKR----------------RGNGSGNDDQPINTDGKSRTDVFISIQ-- 309

Query: 199 ESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR 258
                      AFP LV +     I+ ++ G RHT A++  G ++ WG+G  GQLG G+ 
Sbjct: 310 -----------AFPALVDIANMSEISRISCGSRHTAAVTSAGDLYTWGWGQYGQLGHGTE 358

Query: 259 IRMVSSPHPIPCIES 273
                 P P+    S
Sbjct: 359 -HSTDEPTPVDYFSS 372


>gi|449268693|gb|EMC79542.1| X-linked retinitis pigmentosa GTPase regulator, partial [Columba
           livia]
          Length = 719

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 59/170 (34%), Positives = 93/170 (54%), Gaps = 4/170 (2%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           I+CG  H+A++T  G L  FG   +GQ G GS +    P CV +L   + +    G  HT
Sbjct: 35  ISCGDEHTAIVTGNGKLYMFGSNNWGQLGLGSKNTVSKPTCVKALKPEKTKLAVCGRNHT 94

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHS-KSVSCGARHTAVIAD 423
           +  +  G+VYA GGN  GQLG G  +  +   L+      N H  K ++ G+  +A + +
Sbjct: 95  LVYTEKGNVYAAGGNSEGQLGLGDTEERSTFHLISF--FTNQHKIKQLAAGSYTSAAVTE 152

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           DG++F WG N  GQ+GL D    ++P QV + G    +++CG++H+ L+ 
Sbjct: 153 DGQLFVWGDNSEGQIGLADEACVSVPCQVDV-GKPVSSISCGYYHSALIT 201



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 101/309 (32%), Positives = 143/309 (46%), Gaps = 48/309 (15%)

Query: 204 GDENLSAFP-CLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR---- 258
           G +N  + P C+  L P  +      G  HTL  ++ G V+  G   EGQLGLG      
Sbjct: 65  GSKNTVSKPTCVKALKPE-KTKLAVCGRNHTLVYTEKGNVYAAGGNSEGQLGLGDTEERS 123

Query: 259 ----IRMVSSPHPIPCIESSYGKDRSAALSRGSV------NSEG-------PGFRVP--- 298
               I   ++ H I  + +  G   SAA++          NSEG           VP   
Sbjct: 124 TFHLISFFTNQHKIKQLAA--GSYTSAAVTEDGQLFVWGDNSEGQIGLADEACVSVPCQV 181

Query: 299 --GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLL-GI--Q 353
             G  V  I+CG  HSA+IT  G L TFG    G+ G     ++L  N V   + GI  +
Sbjct: 182 DVGKPVSSISCGYYHSALITGDGELYTFGEPENGKLGL--LPEQLKNNRVPQPVPGIMEK 239

Query: 354 IEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAET-LPRLLDAPSLENVHSKSVS 412
           +  VA G  HT+ ++ + DVY FG  Q+GQLG G    ET +P+      L      +++
Sbjct: 240 VNKVACGGEHTVVLT-ETDVYTFGLGQYGQLGHGTFIFETSVPK--SVKHLRRHKICNIT 296

Query: 413 CGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC------VPRNVACGW 466
           CG  HTAV+A++G +F +G  ++G+LGLG   + N  +Q     C          VACG 
Sbjct: 297 CGENHTAVVAENGLMFTFGDGRHGKLGLG---EENYTNQFDPTLCYNFLRFTVLLVACGG 353

Query: 467 WHTLLLAVP 475
            H L+ A P
Sbjct: 354 CHMLVFAAP 362



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 66/251 (26%), Positives = 118/251 (47%), Gaps = 34/251 (13%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
           ++ G  HT  ++  G+++ +G    GQLGLGS+   VS P    C+++   +    A+  
Sbjct: 35  ISCGDEHTAIVTGNGKLYMFGSNNWGQLGLGSK-NTVSKP---TCVKALKPEKTKLAV-- 88

Query: 286 GSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNC 345
                                CG  H+ V T+ G +   G    GQ G G T++  + + 
Sbjct: 89  ---------------------CGRNHTLVYTEKGNVYAAGGNSEGQLGLGDTEERSTFHL 127

Query: 346 VSSLLGI-QIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLE 404
           +S      +I+ +AAG + +  ++ DG ++ +G N  GQ+G   +   ++P  +D     
Sbjct: 128 ISFFTNQHKIKQLAAGSYTSAAVTEDGQLFVWGDNSEGQIGLADEACVSVPCQVDV---- 183

Query: 405 NVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPR--NV 462
                S+SCG  H+A+I  DG+++ +G  + G+LGL     +N      + G + +   V
Sbjct: 184 GKPVSSISCGYYHSALITGDGELYTFGEPENGKLGLLPEQLKNNRVPQPVPGIMEKVNKV 243

Query: 463 ACGWWHTLLLA 473
           ACG  HT++L 
Sbjct: 244 ACGGEHTVVLT 254



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 56/115 (48%), Gaps = 27/115 (23%)

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL----DAPSLENVHSKSVSCGARHTAV 420
           +C+   G V+ FG ++F         AE +P       D P L       +SCG  HTA+
Sbjct: 1   LCVLESGAVFTFGKSRF---------AEDIPSKFWFKNDKPVL-------ISCGDEHTAI 44

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNV---ACGWWHTLL 471
           +  +GK++ +G N +GQLGLG    +N  S+ T ++   P       CG  HTL+
Sbjct: 45  VTGNGKLYMFGSNNWGQLGLG---SKNTVSKPTCVKALKPEKTKLAVCGRNHTLV 96


>gi|301755358|ref|XP_002913533.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
           [Ailuropoda melanoleuca]
          Length = 1011

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 142/300 (47%), Gaps = 49/300 (16%)

Query: 213 CLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR--------IRMVSS 264
           C+  L P  ++   A G  HTL  ++ G+V+  G   EGQLGLG          I   +S
Sbjct: 90  CVKALKPE-KVKFAACGRNHTLVSTEGGKVYASGGNNEGQLGLGDTDERNSFHLISFFTS 148

Query: 265 PHPIPCIESSYGKDRSAALSRGSV------NSEG------------PGFRVPGNYVKGIA 306
              I  +  S G + SAAL+          NSEG            P     G  +  I+
Sbjct: 149 QRKIKQL--SAGSNTSAALTEDGELFMWGDNSEGQIGLKNITNVCVPQQVTVGKPISWIS 206

Query: 307 CGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN--CVSSLLGI--QIEGVAAGLW 362
           CG  HSA +T  G L TFG    G+ G      +L  N     S+ GI  ++  VA G  
Sbjct: 207 CGYYHSAFVTTEGELYTFGEPESGKLG---LPKQLLVNHRMPQSVPGIPEKVVQVACGGG 263

Query: 363 HTICISSDGDVYAFGGNQFGQLGTGGDQAET-LPRLLDAPSLENVHSKSVSCGARHTAVI 421
           HT+ ++    VY FG  QFGQLG G    ET +P++++   ++++   S+ CG  HTA+I
Sbjct: 264 HTVVLTEKA-VYTFGLGQFGQLGLGTFLFETPVPKVIE--HIKDLKISSIFCGENHTALI 320

Query: 422 ADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC------VPRNVACGWWHTLLLAVP 475
            D G ++ +G  ++G+LGLG     N  +Q T   C      + + VACG  HTL+ A P
Sbjct: 321 TDLGLMYTFGDGRHGKLGLG---LENFTNQFTPTLCSNFLRFIVQLVACGGCHTLVFATP 377



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 57/171 (33%), Positives = 92/171 (53%), Gaps = 4/171 (2%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           ++CG  H+A++T    L  FG   +GQ G GS      P CV +L   +++  A G  HT
Sbjct: 50  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSTVNKPTCVKALKPEKVKFAACGRNHT 109

Query: 365 ICISSDGDVYAFGGNQFGQLGTGG-DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
           +  +  G VYA GGN  GQLG G  D+  +   +    S   +  K +S G+  +A + +
Sbjct: 110 LVSTEGGKVYASGGNNEGQLGLGDTDERNSFHLISFFTSQRKI--KQLSAGSNTSAALTE 167

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAV 474
           DG++F WG N  GQ+GL ++ +  +P QVT+ G     ++CG++H+  +  
Sbjct: 168 DGELFMWGDNSEGQIGLKNITNVCVPQQVTV-GKPISWISCGYYHSAFVTT 217



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 117/264 (44%), Gaps = 56/264 (21%)

Query: 224 ATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAAL 283
           A ++ G  HT  ++   +++ +G    GQLGLGS+   V+ P    C+++          
Sbjct: 48  AFLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSK-STVNKP---TCVKA---------- 93

Query: 284 SRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                        +    VK  ACG  H+ V T+ G +   G    GQ G G TD+  S 
Sbjct: 94  -------------LKPEKVKFAACGRNHTLVSTEGGKVYASGGNNEGQLGLGDTDERNSF 140

Query: 344 NCVSSLLGI-QIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPS 402
           + +S      +I+ ++AG   +  ++ DG+++ +G N  GQ+G        +P+ +    
Sbjct: 141 HLISFFTSQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLKNITNVCVPQQVTV-- 198

Query: 403 LENVHSKS---VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVP 459
                 K    +SCG  H+A +  +G+++ +G  + G+LGL        P Q+ +   +P
Sbjct: 199 -----GKPISWISCGYYHSAFVTTEGELYTFGEPESGKLGL--------PKQLLVNHRMP 245

Query: 460 R----------NVACGWWHTLLLA 473
           +           VACG  HT++L 
Sbjct: 246 QSVPGIPEKVVQVACGGGHTVVLT 269


>gi|66809941|ref|XP_638694.1| inositol 5-phosphatase [Dictyostelium discoideum AX4]
 gi|60467249|gb|EAL65282.1| inositol 5-phosphatase [Dictyostelium discoideum AX4]
          Length = 1800

 Score =  105 bits (263), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 84/291 (28%), Positives = 133/291 (45%), Gaps = 67/291 (23%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
           R+ +V+ G  HTL L+   +++  G+   GQLG+ +   +V S  P+P            
Sbjct: 75  RVVSVSCGFNHTLLLTSEYKIFSMGFNQTGQLGIEN---VVDSAVPLPV----------D 121

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL 341
            LS+              N +K I  G   SA IT+AG L  +G   YGQ G G  + +L
Sbjct: 122 TLSKF-------------NVIK-IKAGNNVSAAITEAGDLYCWGSSAYGQLGNGKMNAKL 167

Query: 342 SPNCVSSLLG---------------IQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
                +++L                +Q   +  G  HTI IS+ G ++++G NQ+GQLG 
Sbjct: 168 HSFTPTTILNPLIPDAEKDDPIYQNLQYTNICFGAQHTIAISTTGAIFSWGSNQYGQLGL 227

Query: 387 GGDQAETLP-----------RLLDAPSLENVHSKS------------VSCGARHTAVIAD 423
           G   A+ +P           R     SL  + +              ++CG  H+A++  
Sbjct: 228 GHCNAKLVPVPIHLDNSFERRAGHINSLGEIVTTDFTAKTIHRIVVDIACGNFHSALLTL 287

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLL 472
           +G +F WG N+YGQLG GD +D+++P  V  ++E      +A G  HT+LL
Sbjct: 288 EGDLFLWGSNQYGQLGQGDSLDQSVPKTVKGSLEFVKINRMALGNNHTILL 338



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 62/189 (32%), Positives = 96/189 (50%), Gaps = 10/189 (5%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLG-SRIRMVSSPHPIPC-IESSYGKD 278
           ++   +  G +HT+A+S  G ++ WG    GQLGLG    ++V    P+P  +++S+ + 
Sbjct: 193 LQYTNICFGAQHTIAISTTGAIFSWGSNQYGQLGLGHCNAKLV----PVPIHLDNSFERR 248

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
                S G + +     +     V  IACG  HSA++T  G L  +G   YGQ GQG + 
Sbjct: 249 AGHINSLGEIVTTDFTAKTIHRIVVDIACGNFHSALLTLEGDLFLWGSNQYGQLGQGDSL 308

Query: 339 DELSPNCVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLG---TGGDQAETL 394
           D+  P  V  SL  ++I  +A G  HTI ++ + DV+ FG N+F QLG    GG      
Sbjct: 309 DQSVPKTVKGSLEFVKINRMALGNNHTILLTKEQDVFTFGSNEFYQLGHGSIGGKNRLYF 368

Query: 395 PRLLDAPSL 403
           P  +  P +
Sbjct: 369 PTQIQKPKV 377



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 71/288 (24%), Positives = 124/288 (43%), Gaps = 51/288 (17%)

Query: 199 ESSSSGDENL--SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLG 256
           ++   G EN+  SA P  V       +  + AG   + A+++ G ++ WG    GQLG G
Sbjct: 102 QTGQLGIENVVDSAVPLPVDTLSKFNVIKIKAGNNVSAAITEAGDLYCWGSSAYGQLGNG 161

Query: 257 SRIRMVSSPHPI----PCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHS 312
                + S  P     P I  +   D              P ++        I  G +H+
Sbjct: 162 KMNAKLHSFTPTTILNPLIPDAEKDD--------------PIYQ--NLQYTNICFGAQHT 205

Query: 313 AVITDAGALLTFGWGLYGQCGQGSTDDELSP----------------NCVSSLLGIQIEG 356
             I+  GA+ ++G   YGQ G G  + +L P                N +  ++      
Sbjct: 206 IAISTTGAIFSWGSNQYGQLGLGHCNAKLVPVPIHLDNSFERRAGHINSLGEIVTTDFTA 265

Query: 357 ---------VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVH 407
                    +A G +H+  ++ +GD++ +G NQ+GQLG G    +++P+ +   SLE V 
Sbjct: 266 KTIHRIVVDIACGNFHSALLTLEGDLFLWGSNQYGQLGQGDSLDQSVPKTVKG-SLEFVK 324

Query: 408 SKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN---IPSQV 452
              ++ G  HT ++  +  VF +G N++ QLG G +  +N    P+Q+
Sbjct: 325 INRMALGNNHTILLTKEQDVFTFGSNEFYQLGHGSIGGKNRLYFPTQI 372


>gi|330837469|ref|YP_004412110.1| cell wall/surface repeat protein [Sphaerochaeta coccoides DSM
           17374]
 gi|329749372|gb|AEC02728.1| cell wall/surface repeat protein [Sphaerochaeta coccoides DSM
           17374]
          Length = 874

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 139/285 (48%), Gaps = 36/285 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGL-----------------GSRIRMVS-- 263
           +A V+AG  HT+ + + G +W  G    GQLGL                 G+ ++ VS  
Sbjct: 555 VAAVSAGYYHTMIVKENGTLWATGNNQYGQLGLASILGTDKNTPVKVTSMGAAVKAVSAG 614

Query: 264 SPHPIPCIES----SYGKDRSAALSRGSVNSEGPGFRV-----PGNY---VKGIACGGRH 311
           S H +   +     + G++    L  G+ +S+G   +V     P ++   V+ ++ G  H
Sbjct: 615 SYHTMILKKDGTLWATGRNNYGQLGDGTTDSKGMPVQVKASTTPNDFMTDVEAVSTGVYH 674

Query: 312 SAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDG 371
           + ++   G L   G+  YGQ G G+++D  +P  V S+ G  +  V+AG  HT+ +  DG
Sbjct: 675 TMILKKDGTLWATGYNEYGQLGDGTSNDRSTPVQVLSM-GADVAAVSAGENHTMILKKDG 733

Query: 372 DVYAFGGNQFGQLGTG--GDQAETLPRLLDAPSLENVHSK--SVSCGARHTAVIADDGKV 427
            ++A G N +GQLG    G    T  ++ D   +    +   +VS G  HT ++  DG +
Sbjct: 734 TLWATGQNTYGQLGDSDSGTNKNTPVQVKDDTDISGFMTDVAAVSAGYGHTMILKMDGTL 793

Query: 428 FCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           +  G N+YGQLG+G+  D + P QV+  G     V  G  +T++L
Sbjct: 794 WAIGRNEYGQLGVGNHNDTSTPVQVSSMGSDVAAVFAGEAYTMIL 838



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 120/257 (46%), Gaps = 37/257 (14%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           V++ +V+    HT+ L   G +W  G     QLG+G    + +   P+  +         
Sbjct: 505 VKVKSVSFKSFHTMLLKIDGTLWATGQNTHSQLGVGGNTNINT---PVKVMTD------- 554

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST--D 338
                                V  ++ G  H+ ++ + G L   G   YGQ G  S    
Sbjct: 555 ---------------------VAAVSAGYYHTMIVKENGTLWATGNNQYGQLGLASILGT 593

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D+ +P  V+S +G  ++ V+AG +HT+ +  DG ++A G N +GQLG G   ++ +P  +
Sbjct: 594 DKNTPVKVTS-MGAAVKAVSAGSYHTMILKKDGTLWATGRNNYGQLGDGTTDSKGMPVQV 652

Query: 399 DAPSLEN---VHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
            A +  N      ++VS G  HT ++  DG ++  G+N+YGQLG G   DR+ P QV   
Sbjct: 653 KASTTPNDFMTDVEAVSTGVYHTMILKKDGTLWATGYNEYGQLGDGTSNDRSTPVQVLSM 712

Query: 456 GCVPRNVACGWWHTLLL 472
           G     V+ G  HT++L
Sbjct: 713 GADVAAVSAGENHTMIL 729



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 73/281 (25%), Positives = 120/281 (42%), Gaps = 42/281 (14%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS--------RIRMVS 263
           P  VT + G  +  V+AG  HT+ L   G +W  G    GQLG G+        +++  +
Sbjct: 598 PVKVT-SMGAAVKAVSAGSYHTMILKKDGTLWATGRNNYGQLGDGTTDSKGMPVQVKAST 656

Query: 264 SPHPIPC-IES------------------SYGKDRSAALSRGSVNSEGPGFRV--PGNYV 302
           +P+     +E+                  + G +    L  G+ N      +V   G  V
Sbjct: 657 TPNDFMTDVEAVSTGVYHTMILKKDGTLWATGYNEYGQLGDGTSNDRSTPVQVLSMGADV 716

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDELSPNCVSSLLGI-----QIEG 356
             ++ G  H+ ++   G L   G   YGQ G   +  ++ +P  V     I      +  
Sbjct: 717 AAVSAGENHTMILKKDGTLWATGQNTYGQLGDSDSGTNKNTPVQVKDDTDISGFMTDVAA 776

Query: 357 VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR 416
           V+AG  HT+ +  DG ++A G N++GQLG G     + P  + +   +     +V  G  
Sbjct: 777 VSAGYGHTMILKMDGTLWAIGRNEYGQLGVGNHNDTSTPVQVSSMGSD---VAAVFAGEA 833

Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDV---IDRNIPSQVTI 454
           +T ++  DG ++  G+N  GQLGLGD      R+ P QV  
Sbjct: 834 YTMILKKDGSLWATGFNTDGQLGLGDSGPETHRSSPEQVVF 874



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 57/190 (30%), Positives = 86/190 (45%), Gaps = 23/190 (12%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
           G  N  + P  V L+ G  +A V+AG  HT+ L   G +W  G    GQLG         
Sbjct: 698 GTSNDRSTPVQV-LSMGADVAAVSAGENHTMILKKDGTLWATGQNTYGQLG--------- 747

Query: 264 SPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLT 323
                   +S  G +++  +     +++  GF      V  ++ G  H+ ++   G L  
Sbjct: 748 --------DSDSGTNKNTPVQVKD-DTDISGFMTD---VAAVSAGYGHTMILKMDGTLWA 795

Query: 324 FGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQ 383
            G   YGQ G G+ +D  +P  VSS+ G  +  V AG  +T+ +  DG ++A G N  GQ
Sbjct: 796 IGRNEYGQLGVGNHNDTSTPVQVSSM-GSDVAAVFAGEAYTMILKKDGSLWATGFNTDGQ 854

Query: 384 LGTGGDQAET 393
           LG G    ET
Sbjct: 855 LGLGDSGPET 864


>gi|431911479|gb|ELK13685.1| Putative E3 ubiquitin-protein ligase HERC6 [Pteropus alecto]
          Length = 1010

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 81/265 (30%), Positives = 122/265 (46%), Gaps = 36/265 (13%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P L+     + +  V+ G  H+LA+   G+V+ WG G EGQLG+      + +P  I  +
Sbjct: 64  PGLIKALETLLVGLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIEECKEKIFTPKKIKTL 123

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
                                      G  +  ++CG  HS  +++ G + ++G    GQ
Sbjct: 124 --------------------------TGIKIIQVSCGHYHSLALSEDGQVYSWGKNSQGQ 157

Query: 332 CGQGST-DDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            G G     + SP  V SL GI +  VAAG  H+  +S  G  + +G N  GQL   G+ 
Sbjct: 158 LGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNTGQLALSGNN 217

Query: 391 AETLPRLLDAP----SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR 446
               P     P    +L+++    +SCG  HTAV+  +GKVF +G N  GQLG      +
Sbjct: 218 T---PVQRYKPHSIGALKSLDVIYISCGYEHTAVLTQNGKVFTFGDNSCGQLGYNPTAKK 274

Query: 447 NIPSQVT-IEGCVPRNVACGWWHTL 470
             P QV  I+G V + + CG +HTL
Sbjct: 275 RGPQQVEGIDGLVSQ-IDCGSYHTL 298



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 100/218 (45%), Gaps = 37/218 (16%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G++I  V+ G  H+LALS+ GQV+ WG   +GQLGLG      +SP  +  +E       
Sbjct: 125 GIKIIQVSCGHYHSLALSEDGQVYSWGKNSQGQLGLGKEFPSQASPQRVRSLE------- 177

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGW-----GLYGQCGQ 334
                              G  +  +A GG HS  ++ +G   +FGW     G     G 
Sbjct: 178 -------------------GIPLAQVAAGGAHSFALSLSGT--SFGWGSNNTGQLALSGN 216

Query: 335 GSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL 394
            +      P+ + +L  + +  ++ G  HT  ++ +G V+ FG N  GQLG      +  
Sbjct: 217 NTPVQRYKPHSIGALKSLDVIYISCGYEHTAVLTQNGKVFTFGDNSCGQLGYNPTAKKRG 276

Query: 395 PRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           P+ ++   ++ + S+ + CG+ HT A +   G+V  +G
Sbjct: 277 PQQVEG--IDGLVSQ-IDCGSYHTLAYVYTTGEVVSFG 311


>gi|5823976|emb|CAB54002.1| RPGR protein [Homo sapiens]
 gi|119579848|gb|EAW59444.1| retinitis pigmentosa GTPase regulator, isoform CRA_d [Homo sapiens]
          Length = 646

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 141/298 (47%), Gaps = 45/298 (15%)

Query: 213 CLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR--------IRMVSS 264
           C+  L P  ++   A G  HTL  ++ G V+  G   EGQLGLG          I   +S
Sbjct: 80  CVKALKPE-KVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTS 138

Query: 265 PHPIPCIESSYGKDRSAALSRGSV------NSEG------------PGFRVPGNYVKGIA 306
            H I  +  S G + SAAL+          NSEG            P     G  V  I+
Sbjct: 139 EHKIKQL--SAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWIS 196

Query: 307 CGGRHSAVITDAGALLTFGWGLYGQCGQGST--DDELSPNCVSSLLGIQIEGVAAGLWHT 364
           CG  HSA +T  G L  FG    G+ G  +    +  +P  VS +    I+ VA G  HT
Sbjct: 197 CGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVIQ-VACGGEHT 255

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAET-LPRLLDAPSLENVHSKS---VSCGARHTAV 420
           + ++ +  VY FG  QFGQLG G    ET  P++     +EN+  ++   +SCG  HTA+
Sbjct: 256 VVLTENA-VYTFGLGQFGQLGLGTFLFETSEPKV-----IENIRDQTISYISCGENHTAL 309

Query: 421 IADDGKVFCWGWNKYGQLGLG--DVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLAVP 475
           I D G ++ +G  ++G+LGLG  +  +  IP+  +     + + VACG  H ++ A P
Sbjct: 310 ITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVFAAP 367



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 60/170 (35%), Positives = 93/170 (54%), Gaps = 2/170 (1%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           ++CG  HSAV+T    L  FG   +GQ G GS      P CV +L   +++  A G  HT
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHT 99

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           +  +  G+VYA GGN  GQLG G  +      ++   + E+   K +S G+  +A + +D
Sbjct: 100 LVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEH-KIKQLSAGSNTSAALTED 158

Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAV 474
           G++F WG N  GQ+GL +V +  +P QVTI   V   ++CG++H+  +  
Sbjct: 159 GRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSW-ISCGYYHSAFVTT 207



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/279 (23%), Positives = 126/279 (45%), Gaps = 38/279 (13%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIE------SSYGKDR 279
           ++ G  H+  ++   +++ +G    GQLGLGS+   +S P  +  ++      ++ G++ 
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSK-SAISKPTCVKALKPEKVKLAACGRNH 98

Query: 280 SAALSRGSV------NSEGP---------------GFRVPGNYVKGIACGGRHSAVITDA 318
           +   + G        N+EG                 F    + +K ++ G   SA +T+ 
Sbjct: 99  TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTED 158

Query: 319 GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           G L  +G    GQ G  +  +   P  V+  +G  +  ++ G +H+  +++DG++Y FG 
Sbjct: 159 GRLFMWGDNSEGQIGLKNVSNVCVPQQVT--IGKPVSWISCGYYHSAFVTTDGELYVFGE 216

Query: 379 NQFGQLGTGGDQA--ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYG 436
            + G+LG           P+L+     + +    V+CG  HT V+ ++  V+ +G  ++G
Sbjct: 217 PENGKLGLPNQLLGNHRTPQLVSEIPEKVIQ---VACGGEHTVVLTENA-VYTFGLGQFG 272

Query: 437 QLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLA 473
           QLGLG  +      +V   I       ++CG  HT L+ 
Sbjct: 273 QLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALIT 311



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 89/330 (26%), Positives = 140/330 (42%), Gaps = 66/330 (20%)

Query: 103 AAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPR 162
           AA G  H +  TEGG VY  G       G   G L  G   +++ F   S F +E     
Sbjct: 92  AACGRNHTLVSTEGGNVYATG-------GNNEGQLGLGDTEERNTFHVISFFTSEH--KI 142

Query: 163 SQVSRSSGGTSSGT-DGR----GSGEEGSKRRRISLAKQTAESSSSGDENLS--AFPCLV 215
            Q+S  S  +++ T DGR    G   EG                  G +N+S    P  V
Sbjct: 143 KQLSAGSNTSAALTEDGRLFMWGDNSEG----------------QIGLKNVSNVCVPQQV 186

Query: 216 TLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSY 275
           T+  G  ++ ++ G  H+  ++  G+++ +G    G+LGL +++                
Sbjct: 187 TI--GKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQL---------------L 229

Query: 276 GKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG 335
           G  R+  L             +P   ++ +ACGG H+ V+T+  A+ TFG G +GQ G G
Sbjct: 230 GNHRTPQLVS----------EIPEKVIQ-VACGGEHTVVLTE-NAVYTFGLGQFGQLGLG 277

Query: 336 STDDELS-PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAET- 393
           +   E S P  + ++    I  ++ G  HT  I+  G +Y FG  + G+LG G +     
Sbjct: 278 TFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNH 337

Query: 394 -LPRLLDAPSLENVHSKSVSCGARHTAVIA 422
            +P L    +      K V+CG  H  V A
Sbjct: 338 FIPTL--CSNFLRFIVKLVACGGCHMVVFA 365


>gi|444917133|ref|ZP_21237237.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444711259|gb|ELW52206.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 1081

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 118/427 (27%), Positives = 182/427 (42%), Gaps = 63/427 (14%)

Query: 53  GCGFAMAISDSRKLITWG--STDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
           G  +++A+     + TWG  S   LG    T+      P P  +   A++V  +   +H 
Sbjct: 610 GPSYSVALGADGSVWTWGENSNGQLGDGTTTA-----RPVPARVSLPATLVALSTRGSHT 664

Query: 111 VAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQ---VSPRSQVSR 167
           VA+   G ++ WG         V G L  GT + +    R  SF   Q      R+  + 
Sbjct: 665 VALDTTGMLWAWG-------RNVSGQLGNGTLVSESTPRRVPSFARVQGFASGLRTTFAL 717

Query: 168 SSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVA 227
            + GT         G+ G+                 G  + S  P      P  R   +A
Sbjct: 718 RADGTVWAWGDNSLGQLGN-----------------GATSASPVPVQAVGYP--RTVPLA 758

Query: 228 AGGRHTLALSDIGQVWGWGYGGEGQLGL-GSRI----RMVSSPHPIPCIES--------- 273
           +G +H LA+S  G V+ +G    GQLG  GS      R ++ P  I  + +         
Sbjct: 759 SGAQHVLAVSSDGSVFSFGSNSRGQLGYEGSATQTSPRWLTGPECIEAVAAGALFSLALS 818

Query: 274 ------SYGKDRSAALSRGSVNSEGPGFRVPG-NYVKGIACGGRHSAVITDAGALLTFGW 326
                 ++G + S  L  G+V +     RVPG  +V  IA G  H+  +   G +  +G 
Sbjct: 819 CDGGVWAWGDNGSGQLGDGAVTARTAPARVPGLAHVVAIAAGSDHALAVRADGTVWAWGA 878

Query: 327 GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
              GQ G G+T     P  V  L  + +  VA G  H++ + +DG V+A+G N  GQLG 
Sbjct: 879 NGSGQLGDGTTTSRAVPMQVKEL--VDVVAVAGGSGHSLAVRADGTVWAWGANGSGQLGD 936

Query: 387 GGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR 446
           G   + TLP  +   +L  V  ++++ GA+H+  +A+ G V+ WG N  GQLG G    R
Sbjct: 937 GTTTSRTLPVFVS--TLSGV--QAIASGAQHSLALAEGGVVWAWGANGSGQLGDGTTTSR 992

Query: 447 NIPSQVT 453
             P QV+
Sbjct: 993 TRPVQVS 999



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 119/433 (27%), Positives = 179/433 (41%), Gaps = 75/433 (17%)

Query: 53  GCGFAMAISDSRKLITWG--STDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
           G   ++A+     + TWG  S   LG      G       P  +P  A I   AAG  H 
Sbjct: 508 GTYHSLALRSDGTVWTWGDNSYGQLGAGATPRGPR----APAVVPGLAVITHVAAGLFHS 563

Query: 111 VAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSG 170
           +A+   G+V+ WG         V+G L  G+   ++V  R S         ++ V+  S 
Sbjct: 564 LALDSSGQVWAWG-------DNVYGQLGDGSTTSRNVPGRVSGL---PAGIQAIVAGPSY 613

Query: 171 GTSSGTDGR--GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAA 228
             + G DG     GE  + +               GD   +A P    ++    +  ++ 
Sbjct: 614 SVALGADGSVWTWGENSNGQL--------------GDGTTTARPVPARVSLPATLVALST 659

Query: 229 GGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI----------------- 271
            G HT+AL   G +W WG    GQLG G+ +   S+P  +P                   
Sbjct: 660 RGSHTVALDTTGMLWAWGRNVSGQLGNGTLVSE-STPRRVPSFARVQGFASGLRTTFALR 718

Query: 272 ---------ESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITDAGA 320
                    ++S G+  + A S   V  +  G+   VP      +A G +H   ++  G+
Sbjct: 719 ADGTVWAWGDNSLGQLGNGATSASPVPVQAVGYPRTVP------LASGAQHVLAVSSDGS 772

Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ-IEGVAAGLWHTICISSDGDVYAFGGN 379
           + +FG    GQ G   +  + SP     L G + IE VAAG   ++ +S DG V+A+G N
Sbjct: 773 VFSFGSNSRGQLGYEGSATQTSPRW---LTGPECIEAVAAGALFSLALSCDGGVWAWGDN 829

Query: 380 QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG 439
             GQLG G   A T P  +  P L   H  +++ G+ H   +  DG V+ WG N  GQLG
Sbjct: 830 GSGQLGDGAVTARTAPARV--PGL--AHVVAIAAGSDHALAVRADGTVWAWGANGSGQLG 885

Query: 440 LGDVIDRNIPSQV 452
            G    R +P QV
Sbjct: 886 DGTTTSRAVPMQV 898



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 86/279 (30%), Positives = 129/279 (46%), Gaps = 32/279 (11%)

Query: 219 PGVRIAT-VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI------RMVSSPHPIPCI 271
           PG+ + T VAAG  H+LAL   GQVW WG    GQLG GS        R+   P  I  I
Sbjct: 548 PGLAVITHVAAGLFHSLALDSSGQVWAWGDNVYGQLGDGSTTSRNVPGRVSGLPAGIQAI 607

Query: 272 ES---------------SYGKDRSAALSRGSVNSEGPGFRV--PGNYVKGIACGGRHSAV 314
            +               ++G++ +  L  G+  +     RV  P   V  ++  G H+  
Sbjct: 608 VAGPSYSVALGADGSVWTWGENSNGQLGDGTTTARPVPARVSLPATLVA-LSTRGSHTVA 666

Query: 315 ITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVY 374
           +   G L  +G  + GQ G G+   E +P  V S    +++G A+GL  T  + +DG V+
Sbjct: 667 LDTTGMLWAWGRNVSGQLGNGTLVSESTPRRVPSF--ARVQGFASGLRTTFALRADGTVW 724

Query: 375 AFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNK 434
           A+G N  GQLG G   A  +P      ++    +  ++ GA+H   ++ DG VF +G N 
Sbjct: 725 AWGDNSLGQLGNGATSASPVP----VQAVGYPRTVPLASGAQHVLAVSSDGSVFSFGSNS 780

Query: 435 YGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
            GQLG      +  P  +T   C+   VA G   +L L+
Sbjct: 781 RGQLGYEGSATQTSPRWLTGPECI-EAVAAGALFSLALS 818



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 80/253 (31%), Positives = 115/253 (45%), Gaps = 28/253 (11%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSP---------------HP 267
           +  VAAG  H++AL + G VW WG   +GQLG G   R V +                H 
Sbjct: 100 VTAVAAGNTHSMALREEGTVWTWGTNTDGQLGDGVSQRSVPAQVAGLTGVTAIAAGNLHS 159

Query: 268 IPCIES---SYGKDRSAALSRGSVNSEGPGFRVPG-NYVKGIACGGRHSAVITDAGALLT 323
           +  I     ++G + +  L  GS  S     +V G   V  IA G  HS  +   G +  
Sbjct: 160 LALINGAVWAWGNNTTGQLGDGSSTSRSTPAKVAGLTEVVAIAAGDFHSLALKRDGTVWA 219

Query: 324 FGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD---GDVYAFGGNQ 380
           +G    GQ G G+ D   +P  VS L G  I  +A G  H++  SS    G V+A+G N 
Sbjct: 220 WGGNYSGQLGDGTLDSRSTPVRVSGLTG--IVALAGGGSHSVAASSTTLGGKVWAWGDNT 277

Query: 381 FGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL 440
           +GQLG GGD +  LP  L+ P L  V   +++ G  H+  +  D  V+ WG N   Q   
Sbjct: 278 YGQLGNGGDVSSLLP--LEVPGLTQV--VALASGTSHSLALRGDDSVWAWGDNAQAQTAQ 333

Query: 441 GDVIDRNIPSQVT 453
                + +P +V+
Sbjct: 334 TGTSVQRVPVRVS 346



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 126/445 (28%), Positives = 187/445 (42%), Gaps = 76/445 (17%)

Query: 49  VCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPL--PTEASIVKAAAG 106
           + GGG     A S +     W   D+   +Y   G  G++    PL  P    +V  A+G
Sbjct: 251 LAGGGSHSVAASSTTLGGKVWAWGDN---TYGQLGNGGDVSSLLPLEVPGLTQVVALASG 307

Query: 107 WAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQV----SPR 162
            +H +A+     V+ WG      + +      TGT + + V  R S     Q     +  
Sbjct: 308 TSHSLALRGDDSVWAWGDNAQAQTAQ------TGTSVQR-VPVRVSGVSDAQALACGNAF 360

Query: 163 SQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLV-TLNPGV 221
           S V R     + G    GSG+ G+                 G  ++ A P  V +L  G 
Sbjct: 361 SLVGRGDN-VTLGWGANGSGQLGN-----------------GSSSVRALPGRVPSLTAG- 401

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES-------S 274
             A++AAG  H       G VW WG    GQLG G+   +VS P P+    +       S
Sbjct: 402 --ASLAAGDHHVFLRQADGSVWAWGDNTYGQLGDGT---LVSRPAPVRLSSTLTSVRALS 456

Query: 275 YGKDRSAAL-SRGSVNSEGPGF----------------RVPGNYVKG---IACGGRHSAV 314
                S AL S G+V + G                   +VPG  V G   IA G  HS  
Sbjct: 457 ASSYHSLALRSDGTVWAWGDNAYGQLGDTSGGRRPSPAQVPG--VAGATEIAAGTYHSLA 514

Query: 315 ITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVY 374
           +   G + T+G   YGQ G G+T        V   L + I  VAAGL+H++ + S G V+
Sbjct: 515 LRSDGTVWTWGDNSYGQLGAGATPRGPRAPAVVPGLAV-ITHVAAGLFHSLALDSSGQVW 573

Query: 375 AFGGNQFGQLGTGGDQAETLP-RLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWN 433
           A+G N +GQLG G   +  +P R+   P+      +++  G  ++  +  DG V+ WG N
Sbjct: 574 AWGDNVYGQLGDGSTTSRNVPGRVSGLPA----GIQAIVAGPSYSVALGADGSVWTWGEN 629

Query: 434 KYGQLGLGDVIDRNIPSQVTIEGCV 458
             GQLG G    R +P++V++   +
Sbjct: 630 SNGQLGDGTTTARPVPARVSLPATL 654



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 109/398 (27%), Positives = 166/398 (41%), Gaps = 54/398 (13%)

Query: 100 IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQV 159
           +V  AAG  H +A+   G V+ WG       G   G L  GT LD      + S LT  V
Sbjct: 198 VVAIAAGDFHSLALKRDGTVWAWG-------GNYSGQLGDGT-LDSRSTPVRVSGLTGIV 249

Query: 160 SPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
           +     S S   +S+   G          +  +    T     +G +  S  P  V   P
Sbjct: 250 ALAGGGSHSVAASSTTLGG----------KVWAWGDNTYGQLGNGGDVSSLLPLEV---P 296

Query: 220 GV-RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG--------LGSRIRMVSSPHPIPC 270
           G+ ++  +A+G  H+LAL     VW WG   + Q          +  R+  VS    + C
Sbjct: 297 GLTQVVALASGTSHSLALRGDDSVWAWGDNAQAQTAQTGTSVQRVPVRVSGVSDAQALAC 356

Query: 271 ------------IESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDA 318
                       +   +G + S  L  GS +      RVP          G H   +  A
Sbjct: 357 GNAFSLVGRGDNVTLGWGANGSGQLGNGSSSVRALPGRVPSLTAGASLAAGDHHVFLRQA 416

Query: 319 -GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
            G++  +G   YGQ G G+     +P  +SS L   +  ++A  +H++ + SDG V+A+G
Sbjct: 417 DGSVWAWGDNTYGQLGDGTLVSRPAPVRLSSTL-TSVRALSASSYHSLALRSDGTVWAWG 475

Query: 378 GNQFGQLG--TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKY 435
            N +GQLG  +GG +    P     P +    +  ++ G  H+  +  DG V+ WG N Y
Sbjct: 476 DNAYGQLGDTSGGRR----PSPAQVPGVAG--ATEIAAGTYHSLALRSDGTVWTWGDNSY 529

Query: 436 GQLGLGDVIDRNIPSQVTIEG-CVPRNVACGWWHTLLL 472
           GQLG G    R   +   + G  V  +VA G +H+L L
Sbjct: 530 GQLGAG-ATPRGPRAPAVVPGLAVITHVAAGLFHSLAL 566



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 116/251 (46%), Gaps = 32/251 (12%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSP-----------------HPI 268
           +AAG  H+L ++  G VW WG   +GQLG GS ++  S+P                 H +
Sbjct: 53  LAAGLNHSLYVTPAGTVWAWGANAQGQLGEGSTLQH-STPTQVVGLTGVTAVAAGNTHSM 111

Query: 269 PCIES----SYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTF 324
              E     ++G +    L  G      P        V  IA G  HS  + + GA+  +
Sbjct: 112 ALREEGTVWTWGTNTDGQLGDGVSQRSVPAQVAGLTGVTAIAAGNLHSLALIN-GAVWAW 170

Query: 325 GWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQL 384
           G    GQ G GS+    +P  V+ L   ++  +AAG +H++ +  DG V+A+GGN  GQL
Sbjct: 171 GNNTTGQLGDGSSTSRSTPAKVAGL--TEVVAIAAGDFHSLALKRDGTVWAWGGNYSGQL 228

Query: 385 GTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD---GKVFCWGWNKYGQLGLG 441
           G G   + + P  +    L  +   +++ G  H+   +     GKV+ WG N YGQLG G
Sbjct: 229 GDGTLDSRSTP--VRVSGLTGI--VALAGGGSHSVAASSTTLGGKVWAWGDNTYGQLGNG 284

Query: 442 DVIDRNIPSQV 452
             +   +P +V
Sbjct: 285 GDVSSLLPLEV 295



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 108/235 (45%), Gaps = 29/235 (12%)

Query: 219  PGV-RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI-RMV-------------- 262
            PG+  +  +AAG  H LA+   G VW WG  G GQLG G+   R V              
Sbjct: 849  PGLAHVVAIAAGSDHALAVRADGTVWAWGANGSGQLGDGTTTSRAVPMQVKELVDVVAVA 908

Query: 263  -SSPHPIPCIES----SYGKDRSAALSRGSVNSEG-PGFRVPGNYVKGIACGGRHSAVIT 316
              S H +         ++G + S  L  G+  S   P F    + V+ IA G +HS  + 
Sbjct: 909  GGSGHSLAVRADGTVWAWGANGSGQLGDGTTTSRTLPVFVSTLSGVQAIASGAQHSLALA 968

Query: 317  DAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAF 376
            + G +  +G    GQ G G+T     P  VS L G+Q  G+ AG   ++ + + G V+++
Sbjct: 969  EGGVVWAWGANGSGQLGDGTTTSRTRPVQVSGLSGVQ--GLVAGASFSLAL-TPGKVWSW 1025

Query: 377  GGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWG 431
            G N  GQLG G   + + P     P+L +    ++S GA+HT V+  D     WG
Sbjct: 1026 GNNSAGQLGDGTLNSRSQPGA--GPTLSSF--VALSAGAQHTVVLRSDDSFLSWG 1076



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 77/299 (25%), Positives = 118/299 (39%), Gaps = 48/299 (16%)

Query: 48   DVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGW 107
            +    G  F++A+S    +  WG   D G   +  G       P  +P  A +V  AAG 
Sbjct: 805  EAVAAGALFSLALSCDGGVWAWG---DNGSGQLGDGAVTARTAPARVPGLAHVVAIAAGS 861

Query: 108  AHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSR 167
             H +AV   G V+ WG      SG++    +T   +   V E          S  S   R
Sbjct: 862  DHALAVRADGTVWAWG---ANGSGQLGDGTTTSRAVPMQVKELVDVVAVAGGSGHSLAVR 918

Query: 168  SSGGTSS-GTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATV 226
            + G   + G +G G   +G+   R                     P  V+   GV+   +
Sbjct: 919  ADGTVWAWGANGSGQLGDGTTTSRT-------------------LPVFVSTLSGVQ--AI 957

Query: 227  AAGGRHTLALSDIGQVWGWGYGGEGQLGLG---SRIRMVS----------------SPHP 267
            A+G +H+LAL++ G VW WG  G GQLG G   SR R V                 S   
Sbjct: 958  ASGAQHSLALAEGGVVWAWGANGSGQLGDGTTTSRTRPVQVSGLSGVQGLVAGASFSLAL 1017

Query: 268  IPCIESSYGKDRSAALSRGSVNSEG-PGFRVPGNYVKGIACGGRHSAVITDAGALLTFG 325
             P    S+G + +  L  G++NS   PG     +    ++ G +H+ V+    + L++G
Sbjct: 1018 TPGKVWSWGNNSAGQLGDGTLNSRSQPGAGPTLSSFVALSAGAQHTVVLRSDDSFLSWG 1076


>gi|270002050|gb|EEZ98497.1| hypothetical protein TcasGA2_TC000997 [Tribolium castaneum]
          Length = 1042

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 90/274 (32%), Positives = 124/274 (45%), Gaps = 28/274 (10%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLG---SRIRMVSSPHPIPCIESSYGKDR 279
           +   A G  HTL L+  G+V+  G    GQLG      R ++VS       I  + G+  
Sbjct: 36  VMKAALGANHTLFLTKDGKVYSCGSNDYGQLGHDQPRKRPQLVSGLDAYSIINVACGEMH 95

Query: 280 SAALSR-------GSVNSEGPGFRVPGNY--------------VKGIACGGRHSAVITDA 318
           S ALSR       GS N    G ++ G                V  IA G RHS  +T+A
Sbjct: 96  SLALSRWGEVFSWGSDNYGQLGHQLGGTLQIVPKLIKSLAKYQVVQIAAGQRHSVALTNA 155

Query: 319 GALLTFGWGLYGQCGQGS-TDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
           G +  +G   +GQ G G+ T  E +P  V SL GI    +A G  HT  +S  G V+ +G
Sbjct: 156 GEIFVWGANDFGQLGLGTITPYESTPTTVCSLSGIPFALIACGANHTFAVSKSGAVFGWG 215

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQ 437
            N  GQLG     ++  P  L   +L N   + +SCG   +  +  DG VF  G   YGQ
Sbjct: 216 KNINGQLGLNDTVSKKFPTQLR--TLRNSRVRFISCGDEFSTFLTLDGGVFSCGAGMYGQ 273

Query: 438 LGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
           LG G   +  +P QV  + G     ++CG  H+L
Sbjct: 274 LGHGGTSNEILPRQVLELMGSTITQISCGRQHSL 307



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 94/361 (26%), Positives = 155/361 (42%), Gaps = 75/361 (20%)

Query: 84  KHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGL 143
           +H   P+        S++KAA G  H + +T+ G+VY+ G  +       +G L    G 
Sbjct: 20  EHVFTPKALDWFEAKSVMKAALGANHTLFLTKDGKVYSCGSND-------YGQL----GH 68

Query: 144 DKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSS 203
           D+               PR +    SG  +        GE  S    ++L++   E  S 
Sbjct: 69  DQ---------------PRKRPQLVSGLDAYSIINVACGEMHS----LALSRW-GEVFSW 108

Query: 204 GDEN-----------LSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQ 252
           G +N           L   P L+      ++  +AAG RH++AL++ G+++ WG    GQ
Sbjct: 109 GSDNYGQLGHQLGGTLQIVPKLIKSLAKYQVVQIAAGQRHSVALTNAGEIFVWGANDFGQ 168

Query: 253 LGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHS 312
           LGLG+     S+P  +             +LS       G  F +       IACG  H+
Sbjct: 169 LGLGTITPYESTPTTV------------CSLS-------GIPFAL-------IACGANHT 202

Query: 313 AVITDAGALLTFGWG--LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
             ++ +GA+  FGWG  + GQ G   T  +  P  + +L   ++  ++ G   +  ++ D
Sbjct: 203 FAVSKSGAV--FGWGKNINGQLGLNDTVSKKFPTQLRTLRNSRVRFISCGDEFSTFLTLD 260

Query: 371 GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFC 429
           G V++ G   +GQLG GG   E LPR      L       +SCG +H+ A +   G+V+ 
Sbjct: 261 GGVFSCGAGMYGQLGHGGTSNEILPR--QVLELMGSTITQISCGRQHSLAFVPSRGRVYS 318

Query: 430 W 430
           +
Sbjct: 319 Y 319



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 7/104 (6%)

Query: 373 VYAFGGNQFGQLGTGGDQAETL--PRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
           ++ +G    G+LG GG + E +  P+ LD    ++V   ++  GA HT  +  DGKV+  
Sbjct: 1   MFGWGSTIHGELGLGGIEEEHVFTPKALDWFEAKSVMKAAL--GANHTLFLTKDGKVYSC 58

Query: 431 GWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLA 473
           G N YGQLG      R  P  V+ ++     NVACG  H+L L+
Sbjct: 59  GSNDYGQLGHDQ--PRKRPQLVSGLDAYSIINVACGEMHSLALS 100



 Score = 40.0 bits (92), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 11/96 (11%)

Query: 49  VCGGGCGFAMAISDSR--KLITWGSTDDLGQS-YVTSGKHGEIPEPFPLPTEASIVKAAA 105
           +    CG   +++ SR  ++ +WGS D+ GQ  +   G    +P+      +  +V+ AA
Sbjct: 86  IINVACGEMHSLALSRWGEVFSWGS-DNYGQLGHQLGGTLQIVPKLIKSLAKYQVVQIAA 144

Query: 106 GWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGT 141
           G  H VA+T  GE++ WG  +       FG L  GT
Sbjct: 145 GQRHSVALTNAGEIFVWGAND-------FGQLGLGT 173


>gi|47214261|emb|CAG01938.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1055

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 113/379 (29%), Positives = 160/379 (42%), Gaps = 66/379 (17%)

Query: 83  GKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTG 142
            K G  PE         I   + G AH +AV E G+V+ WG  +    G   G       
Sbjct: 68  NKPGTSPELVGALDTQRITLVSCGQAHSMAVNEQGQVFAWGAGDGGQLG--LGTTEAAVR 125

Query: 143 LDKDVFERQSSFLTEQVSPRSQ--VSRSSGG-------TSSGTDGRGSGEEGSKRRRISL 193
           + + + +R       QV   +Q  ++ S  G        +SG  G G GE          
Sbjct: 126 IPR-LIKRLCDHRIAQVMCGNQHCIALSKDGQLFTWGQNTSGQLGLGKGEPSK------- 177

Query: 194 AKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQL 253
                            FP  +    G+ +A + AGG H+ ALS  G V+GWG    GQL
Sbjct: 178 ----------------LFPQPLKSLAGIPLAKITAGGDHSFALSLSGAVFGWGKNKAGQL 221

Query: 254 GLGSRIRMVSSPHPIPCIES------SYGKDRSAALSRGSVNSEGPGFRVPGN------Y 301
           GL   I+  + P  I  + S      S G + +AAL++  + S    FR  G       +
Sbjct: 222 GLND-IQDRAVPCHIKFLRSQKVVHISCGDEHTAALTKVRIRSASQCFRTSGGRCSNPFF 280

Query: 302 VKGIACGGRHSAVIT------DAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
            + I C   HS  +T        G L TFG G +GQ G GST +EL P  V  L+G ++ 
Sbjct: 281 CQRIGCS--HSTRVTILLWLFQDGGLFTFGDGSWGQLGHGSTSNELLPRRVLELMGTEVS 338

Query: 356 GVAAGLWHTICIS-SDGDVYAFGGNQFGQLGTGGDQAET--LPRLLDAPSLENVHSKS-- 410
            +  G  HT+  + S G VYAFGGN  GQLGTG   AE    P  ++  S  N  + S  
Sbjct: 339 QITCGRHHTLAFAPSSGVVYAFGGNSHGQLGTGELSAEKCLYPVKINLLSGNNHRTDSKK 398

Query: 411 -----VSCGARHTAVIADD 424
                ++CG  H+ ++  +
Sbjct: 399 YSVTKITCGGDHSFLLYSN 417



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 116/250 (46%), Gaps = 34/250 (13%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +     GG+H++ L   G V+  G  G GQLG                    + K  ++ 
Sbjct: 35  LKEAVCGGQHSVFLLHDGSVYTCGSNGCGQLG--------------------HNKPGTSP 74

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
              G+++++          +  ++CG  HS  + + G +  +G G  GQ G G+T+  + 
Sbjct: 75  ELVGALDTQR---------ITLVSCGQAHSMAVNEQGQVFAWGAGDGGQLGLGTTEAAVR 125

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG-GDQAETLPRLLDA 400
            P  +  L   +I  V  G  H I +S DG ++ +G N  GQLG G G+ ++  P+ L  
Sbjct: 126 IPRLIKRLCDHRIAQVMCGNQHCIALSKDGQLFTWGQNTSGQLGLGKGEPSKLFPQPLK- 184

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVP 459
            SL  +    ++ G  H+  ++  G VF WG NK GQLGL D+ DR +P  +  +     
Sbjct: 185 -SLAGIPLAKITAGGDHSFALSLSGAVFGWGKNKAGQLGLNDIQDRAVPCHIKFLRSQKV 243

Query: 460 RNVACGWWHT 469
            +++CG  HT
Sbjct: 244 VHISCGDEHT 253



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 102/249 (40%), Gaps = 39/249 (15%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHP------IPCIESSY 275
           RIA V  G +H +ALS  GQ++ WG    GQLGLG        P P      IP  + + 
Sbjct: 137 RIAQVMCGNQHCIALSKDGQLFTWGQNTSGQLGLGKGEPSKLFPQPLKSLAGIPLAKITA 196

Query: 276 GKDRSAALS-RGSV-----NSEGP-GFR------VP-------GNYVKGIACGGRHSAVI 315
           G D S ALS  G+V     N  G  G        VP          V  I+CG  H+A +
Sbjct: 197 GGDHSFALSLSGAVFGWGKNKAGQLGLNDIQDRAVPCHIKFLRSQKVVHISCGDEHTAAL 256

Query: 316 TDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYA 375
           T              QC + S     +P     +       V   LW    +  DG ++ 
Sbjct: 257 TKVRIRSA------SQCFRTSGGRCSNPFFCQRIGCSHSTRVTILLW----LFQDGGLFT 306

Query: 376 FGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIA-DDGKVFCWGWNK 434
           FG   +GQLG G    E LPR      L       ++CG  HT   A   G V+ +G N 
Sbjct: 307 FGDGSWGQLGHGSTSNELLPR--RVLELMGTEVSQITCGRHHTLAFAPSSGVVYAFGGNS 364

Query: 435 YGQLGLGDV 443
           +GQLG G++
Sbjct: 365 HGQLGTGEL 373


>gi|354500120|ref|XP_003512150.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
           [Cricetulus griseus]
          Length = 631

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 113/251 (45%), Gaps = 30/251 (11%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
            I  VA G  H+LALSD GQ++ WG G +GQLGL +    V+ P  I             
Sbjct: 85  HIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ------------ 132

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDE 340
                         ++    +  ++CG  H   +   G   T+G   +GQ G G     +
Sbjct: 133 --------------KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
            SP  V SL GI +  VAAG  H+  +S  G V+ +G N  GQLG   ++    P  +  
Sbjct: 179 TSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKL 238

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVP 459
              + V    +SCG  HTAV+   G VF +G    GQLG G + D   P +V  + G   
Sbjct: 239 LRTQKV--VYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHGSMNDEVNPRRVLELMGSEV 296

Query: 460 RNVACGWWHTL 470
             +ACG  HTL
Sbjct: 297 TQIACGRQHTL 307



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 91/308 (29%), Positives = 139/308 (45%), Gaps = 51/308 (16%)

Query: 84  KHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGL 143
           + G  PE      +  IV  A G +H +A+++ G++++WG           G L   T  
Sbjct: 70  REGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWG-------AGSDGQLGLMTTE 122

Query: 144 DKDVFERQSSFLTEQVSPRSQVSRSSGG---TSSGTDGRGSGEEGSKRRRISLAKQTAES 200
           D     R    L ++++ ++ +  S G     +   DG+      +   ++ L K+    
Sbjct: 123 DSVAVPR----LIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 201 SSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR 260
           +S         P  V    G+ +A VAAGG H+ ALS  G V+GWG    GQLGL     
Sbjct: 179 TS---------PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE-- 227

Query: 261 MVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA 320
                           KDR +      + ++          V  I+CG  H+AV+T +G 
Sbjct: 228 ----------------KDRESPCHVKLLRTQK---------VVYISCGEEHTAVLTKSGG 262

Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFGGN 379
           + TFG G  GQ G GS +DE++P  V  L+G ++  +A G  HT+  + S G +YAFG  
Sbjct: 263 VFTFGAGSCGQLGHGSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 380 QFGQLGTG 387
             GQLGTG
Sbjct: 323 ARGQLGTG 330



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 118/253 (46%), Gaps = 34/253 (13%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  VA GG H++ L + G+V+  G   +GQLG     R  + P  I  +           
Sbjct: 36  IKEVACGGNHSVFLLEDGEVYTCGVNSKGQLG---HEREGNKPEQIGALAD--------- 83

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                             ++  +ACG  HS  ++D G L ++G G  GQ G  +T+D ++
Sbjct: 84  -----------------QHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA 126

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD-QAETLPRLLDA 400
            P  +  L    I  V+ G WH + +++DG  + +G N  GQLG G +  ++T P+ +  
Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVR- 185

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVP- 459
            SLE +    V+ G  H+  ++  G VF WG N  GQLGL D  DR  P  V +      
Sbjct: 186 -SLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKV 244

Query: 460 RNVACGWWHTLLL 472
             ++CG  HT +L
Sbjct: 245 VYISCGEEHTAVL 257



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 93/369 (25%), Positives = 144/369 (39%), Gaps = 79/369 (21%)

Query: 39  PLTVGS-AWRDVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLP 95
           P  +G+ A + +    CG   ++A+SD  +L +WG+  D     +T+     +P      
Sbjct: 75  PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 96  TEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFL 155
            + +I++ + G  HC+A+   G+ +TWG           G L    GL K+         
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWGKNS-------HGQL----GLGKE--------F 175

Query: 156 TEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLA-------KQTAESSSSGDENL 208
             Q SP  Q  RS  G        G    G+    +SL+          A      DE  
Sbjct: 176 PSQTSP--QRVRSLEGIPLAQVAAG----GAHSFALSLSGAVFGWGMNNAGQLGLSDEKD 229

Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
              PC V L    ++  ++ G  HT  L+  G V+ +G G  GQLG GS   M    +P 
Sbjct: 230 RESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHGS---MNDEVNPR 286

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHS-AVITDAGALLTFGWG 327
             +E                        + G+ V  IACG +H+ A +  +G +  FG G
Sbjct: 287 RVLE------------------------LMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLG 385
             GQ G G T +   P+ V             G W  H+  +S+  D + +      Q+ 
Sbjct: 323 ARGQLGTGHTCNVKCPSPVK------------GYWAAHSGQLSARADRFKY--RVVKQIF 368

Query: 386 TGGDQAETL 394
           +GGDQ   L
Sbjct: 369 SGGDQTFVL 377



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 44/124 (35%), Positives = 62/124 (50%), Gaps = 10/124 (8%)

Query: 354 IEGVAAGLWHTICISSDGDVYAFGGNQFGQLG--TGGDQAETLPRLLDAPSLENVHSKSV 411
           I+ VA G  H++ +  DG+VY  G N  GQLG    G++ E +  L D       H   V
Sbjct: 36  IKEVACGGNHSVFLLEDGEVYTCGVNSKGQLGHEREGNKPEQIGALADQ------HIVHV 89

Query: 412 SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR-NIPSQV-TIEGCVPRNVACGWWHT 469
           +CG  H+  ++D G++F WG    GQLGL    D   +P  +  +       V+CG WH 
Sbjct: 90  ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149

Query: 470 LLLA 473
           L LA
Sbjct: 150 LALA 153


>gi|330837672|ref|YP_004412313.1| chromosome condensation regulator RCC1 [Sphaerochaeta coccoides DSM
           17374]
 gi|329749575|gb|AEC02931.1| regulator of chromosome condensation RCC1 [Sphaerochaeta coccoides
           DSM 17374]
          Length = 812

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 82/257 (31%), Positives = 120/257 (46%), Gaps = 38/257 (14%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +A V+ GG HT+ L   G +W  GY  +GQLG+G      S+P P+P + +         
Sbjct: 554 VAAVSVGGGHTMILKKDGTLWATGYNYDGQLGVGDYNDR-STPVPVPSMNTD-------- 604

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                          P N V  ++ G  H+ ++   G L   G     Q G    DD L+
Sbjct: 605 ---------------PNNPVVAVSVGFSHTMILKKDGTLWATGSNGEAQLG---VDDNLN 646

Query: 343 PNC---VSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAET-LPRLL 398
            N    VSS+ G Q+  V+AG  HT+ +  DG ++A G N +G+LG G     T +   +
Sbjct: 647 KNTPVPVSSM-GNQVAAVSAGETHTMILKKDGTLWATGYNGYGELGLGSSSLGTNISTPV 705

Query: 399 DAPSLE---NVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
             PS+    N    +VS G  HT ++  DG ++  G N  GQLG GD  DR+ P QV+  
Sbjct: 706 PVPSMNTDPNNPVAAVSAGKLHTMIVKKDGTLWATGLNDSGQLGDGDNTDRSTPVQVSSN 765

Query: 456 GCVPRNVACGWWHTLLL 472
                 V  G +HT++L
Sbjct: 766 ---VEAVFAGGYHTMIL 779



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 59/183 (32%), Positives = 88/183 (48%), Gaps = 12/183 (6%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSP-----NCVSSLLGIQIEG 356
           VK ++ GG H+ ++   G L   G+   GQ G G   D  +P     +  +      +  
Sbjct: 440 VKSVSAGGYHTMILKTDGTLWATGYNYDGQLGVGDNTDRSTPVQVKASTAADDFMTDVAD 499

Query: 357 VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA---PSLENVHSKSVSC 413
           V AG  HT+ +  DG ++A G N  GQLG G D + + P  + A   P        +VS 
Sbjct: 500 VFAGESHTMIVKKDGTLWATGYNNHGQLGVGDDISRSTPVRVKASTDPDDFMTDVAAVSV 559

Query: 414 GARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRN----VACGWWHT 469
           G  HT ++  DG ++  G+N  GQLG+GD  DR+ P  V      P N    V+ G+ HT
Sbjct: 560 GGGHTMILKKDGTLWATGYNYDGQLGVGDYNDRSTPVPVPSMNTDPNNPVVAVSVGFSHT 619

Query: 470 LLL 472
           ++L
Sbjct: 620 MIL 622



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 112/258 (43%), Gaps = 32/258 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           + +V+AGG HT+ L   G +W  GY  +GQLG+G      +   P+    S+   D    
Sbjct: 440 VKSVSAGGYHTMILKTDGTLWATGYNYDGQLGVGDNTDRST---PVQVKASTAADD---- 492

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                       F      V  +  G  H+ ++   G L   G+  +GQ G G      +
Sbjct: 493 ------------FMTD---VADVFAGESHTMIVKKDGTLWATGYNNHGQLGVGDDISRST 537

Query: 343 PNCVSSL-----LGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
           P  V +          +  V+ G  HT+ +  DG ++A G N  GQLG G     + P  
Sbjct: 538 PVRVKASTDPDDFMTDVAAVSVGGGHTMILKKDGTLWATGYNYDGQLGVGDYNDRSTP-- 595

Query: 398 LDAPSLE---NVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI 454
           +  PS+    N    +VS G  HT ++  DG ++  G N   QLG+ D +++N P  V+ 
Sbjct: 596 VPVPSMNTDPNNPVVAVSVGFSHTMILKKDGTLWATGSNGEAQLGVDDNLNKNTPVPVSS 655

Query: 455 EGCVPRNVACGWWHTLLL 472
            G     V+ G  HT++L
Sbjct: 656 MGNQVAAVSAGETHTMIL 673



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 88/194 (45%), Gaps = 29/194 (14%)

Query: 205 DENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI--RMV 262
           D+NL+    +   + G ++A V+AG  HT+ L   G +W  GY G G+LGLGS      +
Sbjct: 642 DDNLNKNTPVPVSSMGNQVAAVSAGETHTMILKKDGTLWATGYNGYGELGLGSSSLGTNI 701

Query: 263 SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL 322
           S+P P+P + +                        P N V  ++ G  H+ ++   G L 
Sbjct: 702 STPVPVPSMNTD-----------------------PNNPVAAVSAGKLHTMIVKKDGTLW 738

Query: 323 TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFG 382
             G    GQ G G   D  +P  VSS     +E V AG +HT+ +  DG ++A G N  G
Sbjct: 739 ATGLNDSGQLGDGDNTDRSTPVQVSS----NVEAVFAGGYHTMILKKDGTLWATGNNWAG 794

Query: 383 QLGTGGDQAETLPR 396
           QLG   +   + P 
Sbjct: 795 QLGVSDNTNRSTPE 808


>gi|297812127|ref|XP_002873947.1| hypothetical protein ARALYDRAFT_488831 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297319784|gb|EFH50206.1| hypothetical protein ARALYDRAFT_488831 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1100

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 58/169 (34%), Positives = 94/169 (55%), Gaps = 2/169 (1%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ IACGG+H+ ++T  G   ++G    G+ G G   +   P  + +L    IE VA G 
Sbjct: 309 VQYIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALSTTNIELVACGE 368

Query: 362 WHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
           +H+  ++  GD+Y +G   FG LG G + +  +P+ ++   +E +H  S++CG  HTAV+
Sbjct: 369 YHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNF-LMEGIHVSSIACGPYHTAVV 427

Query: 422 ADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
              G++F +G   +G LG GD     IP +V +++G      ACG WHT
Sbjct: 428 TSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHT 476



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 120/282 (42%), Gaps = 44/282 (15%)

Query: 205 DENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSS 264
           D N+   P L+       I  VA G  H+ A++  G ++ WG G  G LG G+ +     
Sbjct: 344 DSNVQ-HPKLIDALSTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEV----- 397

Query: 265 PHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTF 324
            H +P                  VN     F + G +V  IACG  H+AV+T AG L TF
Sbjct: 398 SHWVP----------------KRVN-----FLMEGIHVSSIACGPYHTAVVTSAGQLFTF 436

Query: 325 GWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI------------SSDGD 372
           G G +G  G G       P  V SL G++    A G+WHT  +             S G 
Sbjct: 437 GDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 496

Query: 373 VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGW 432
           ++ +G     +LG G  + + +P  + A  L   +   V+CG   T  +   G V+  G 
Sbjct: 497 LFTWGDGDKSRLGHGDKEPKLVPTCVAA--LVEPNFCQVACGHSLTVALTTSGHVYTMGS 554

Query: 433 NKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLL 472
             YGQLG     D  +P++V   +       +ACG +H  +L
Sbjct: 555 PVYGQLG-NPHADGKVPTRVEGKLHKSFVEEIACGAYHVAVL 595



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 73/262 (27%), Positives = 119/262 (45%), Gaps = 42/262 (16%)

Query: 217 LNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYG 276
           L  G+ ++++A G  HT  ++  GQ++ +G G  G LG G R + V  P  +  ++    
Sbjct: 408 LMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDR-KSVFIPREVDSLK---- 462

Query: 277 KDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDA------------GALLTF 324
                            G R     V+  ACG  H+A + +             G L T+
Sbjct: 463 -----------------GLRT----VRA-ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 500

Query: 325 GWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQL 384
           G G   + G G  + +L P CV++L+      VA G   T+ +++ G VY  G   +GQL
Sbjct: 501 GDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQL 560

Query: 385 GTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVI 444
           G      +   R+     L     + ++CGA H AV+    +V+ WG    G+LG GD  
Sbjct: 561 GNPHADGKVPTRV--EGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDAD 618

Query: 445 DRNIPSQV-TIEGCVPRNVACG 465
           DRN P+ V +++    +++ACG
Sbjct: 619 DRNSPTLVESLKDKQVKSIACG 640



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 74/136 (54%), Gaps = 4/136 (2%)

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D L P  + S + + ++ +A G  H + ++  G+ +++G    G+LG G D     P+L+
Sbjct: 294 DSLLPKALESTIVLDVQYIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLI 353

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT--IEG 456
           DA S  N+  + V+CG  H+  +   G ++ WG   +G LG G+ +   +P +V   +EG
Sbjct: 354 DALSTTNI--ELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEG 411

Query: 457 CVPRNVACGWWHTLLL 472
               ++ACG +HT ++
Sbjct: 412 IHVSSIACGPYHTAVV 427



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 97/387 (25%), Positives = 158/387 (40%), Gaps = 68/387 (17%)

Query: 50  CGGGCGFAMAISDSRKLITWGSTDD--LGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGW 107
           CGG    A+ ++   +  +WG   +  LG    ++ +H   P+     +  +I   A G 
Sbjct: 314 CGGQ--HAVLVTKQGESFSWGEESEGRLGHGVDSNVQH---PKLIDALSTTNIELVACGE 368

Query: 108 AHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSR 167
            H  AVT  G++YTWG  +       FG L  G  +   V +R  +FL E +     VS 
Sbjct: 369 YHSCAVTLSGDLYTWGKGD-------FGILGHGNEVSHWVPKR-VNFLMEGI----HVSS 416

Query: 168 SSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVA 227
            + G         +G+        +    T      GD      P  V    G+R    A
Sbjct: 417 IACGPYHTAVVTSAGQ------LFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAA 470

Query: 228 AGGRHTLALSDI------------GQVWGWGYGGEGQLGLGSRIRMVSSPHPIP-CIESS 274
            G  HT A+ ++            G+++ WG G + +LG G +      P  +P C+   
Sbjct: 471 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDK-----EPKLVPTCV--- 522

Query: 275 YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
                 AAL             V  N+ + +ACG   +  +T +G + T G  +YGQ G 
Sbjct: 523 ------AAL-------------VEPNFCQ-VACGHSLTVALTTSGHVYTMGSPVYGQLGN 562

Query: 335 GSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL 394
              D ++       L    +E +A G +H   ++S  +VY +G    G+LG G       
Sbjct: 563 PHADGKVPTRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDADDRNS 622

Query: 395 PRLLDAPSLENVHSKSVSCGARHTAVI 421
           P L++  SL++   KS++CG+  TA +
Sbjct: 623 PTLVE--SLKDKQVKSIACGSNFTAAV 647


>gi|281347459|gb|EFB23043.1| hypothetical protein PANDA_001337 [Ailuropoda melanoleuca]
          Length = 1199

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 142/300 (47%), Gaps = 49/300 (16%)

Query: 213 CLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR--------IRMVSS 264
           C+  L P  ++   A G  HTL  ++ G+V+  G   EGQLGLG          I   +S
Sbjct: 70  CVKALKPE-KVKFAACGRNHTLVSTEGGKVYASGGNNEGQLGLGDTDERNSFHLISFFTS 128

Query: 265 PHPIPCIESSYGKDRSAALSRGSV------NSEG------------PGFRVPGNYVKGIA 306
              I  +  S G + SAAL+          NSEG            P     G  +  I+
Sbjct: 129 QRKIKQL--SAGSNTSAALTEDGELFMWGDNSEGQIGLKNITNVCVPQQVTVGKPISWIS 186

Query: 307 CGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN--CVSSLLGI--QIEGVAAGLW 362
           CG  HSA +T  G L TFG    G+ G      +L  N     S+ GI  ++  VA G  
Sbjct: 187 CGYYHSAFVTTEGELYTFGEPESGKLG---LPKQLLVNHRMPQSVPGIPEKVVQVACGGG 243

Query: 363 HTICISSDGDVYAFGGNQFGQLGTGGDQAET-LPRLLDAPSLENVHSKSVSCGARHTAVI 421
           HT+ ++    VY FG  QFGQLG G    ET +P++++   ++++   S+ CG  HTA+I
Sbjct: 244 HTVVLTEKA-VYTFGLGQFGQLGLGTFLFETPVPKVIE--HIKDLKISSIFCGENHTALI 300

Query: 422 ADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC------VPRNVACGWWHTLLLAVP 475
            D G ++ +G  ++G+LGLG     N  +Q T   C      + + VACG  HTL+ A P
Sbjct: 301 TDLGLMYTFGDGRHGKLGLG---LENFTNQFTPTLCSNFLRFIVQLVACGGCHTLVFATP 357



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 57/171 (33%), Positives = 92/171 (53%), Gaps = 4/171 (2%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           ++CG  H+A++T    L  FG   +GQ G GS      P CV +L   +++  A G  HT
Sbjct: 30  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSTVNKPTCVKALKPEKVKFAACGRNHT 89

Query: 365 ICISSDGDVYAFGGNQFGQLGTGG-DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
           +  +  G VYA GGN  GQLG G  D+  +   +    S   +  K +S G+  +A + +
Sbjct: 90  LVSTEGGKVYASGGNNEGQLGLGDTDERNSFHLISFFTSQRKI--KQLSAGSNTSAALTE 147

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAV 474
           DG++F WG N  GQ+GL ++ +  +P QVT+ G     ++CG++H+  +  
Sbjct: 148 DGELFMWGDNSEGQIGLKNITNVCVPQQVTV-GKPISWISCGYYHSAFVTT 197



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 117/255 (45%), Gaps = 38/255 (14%)

Query: 224 ATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAAL 283
           A ++ G  HT  ++   +++ +G    GQLGLGS+   V+ P    C+++          
Sbjct: 28  AFLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSK-STVNKP---TCVKA---------- 73

Query: 284 SRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                        +    VK  ACG  H+ V T+ G +   G    GQ G G TD+  S 
Sbjct: 74  -------------LKPEKVKFAACGRNHTLVSTEGGKVYASGGNNEGQLGLGDTDERNSF 120

Query: 344 NCVSSLLGI-QIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPS 402
           + +S      +I+ ++AG   +  ++ DG+++ +G N  GQ+G        +P+ +    
Sbjct: 121 HLISFFTSQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLKNITNVCVPQQVTV-- 178

Query: 403 LENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGD--VIDRNIPSQV--TIEGCV 458
                   +SCG  H+A +  +G+++ +G  + G+LGL    +++  +P  V    E  V
Sbjct: 179 --GKPISWISCGYYHSAFVTTEGELYTFGEPESGKLGLPKQLLVNHRMPQSVPGIPEKVV 236

Query: 459 PRNVACGWWHTLLLA 473
              VACG  HT++L 
Sbjct: 237 --QVACGGGHTVVLT 249


>gi|156394306|ref|XP_001636767.1| predicted protein [Nematostella vectensis]
 gi|156223873|gb|EDO44704.1| predicted protein [Nematostella vectensis]
          Length = 363

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 70/216 (32%), Positives = 115/216 (53%), Gaps = 18/216 (8%)

Query: 261 MVSSPHPIPCIES----SYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVIT 316
           M S    +P  ES    ++GK R A       ++    F +  + V  ++CG  HSAV+T
Sbjct: 1   MASDDEDVP--ESGAVFTFGKTRFA-------DNLANKFWIRDDAVVNLSCGDEHSAVVT 51

Query: 317 DAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAF 376
             G L TFG   +GQ G G+T     P+ V  L   ++  VA G  HTI  +  G +Y+F
Sbjct: 52  ANGKLYTFGCNDWGQLGHGNTKSYTKPSVVKKLKPEKVYMVACGRNHTIAATESGHLYSF 111

Query: 377 GGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYG 436
           G    GQLG G  +   +P++++   ++    K ++CG+  +A I ++G+++ WG    G
Sbjct: 112 GCGGDGQLGHGDAEDSHVPKIIEGLDVQKY--KHLACGSDFSAAITENGELYTWGSCGEG 169

Query: 437 QLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           Q GLG+  D  IP+++ + G V R V+CG++H  ++
Sbjct: 170 QNGLGE--DTEIPTRLHLHGKV-RMVSCGYYHMAVV 202



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 93/296 (31%), Positives = 131/296 (44%), Gaps = 44/296 (14%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P +V      ++  VA G  HT+A ++ G ++ +G GG+GQLG G         H    I
Sbjct: 78  PSVVKKLKPEKVYMVACGRNHTIAATESGHLYSFGCGGDGQLGHGD----AEDSHVPKII 133

Query: 272 ES---------SYGKDRSAALSR-------GSV----NSEGPGFRVPGNY-----VKGIA 306
           E          + G D SAA++        GS     N  G    +P        V+ ++
Sbjct: 134 EGLDVQKYKHLACGSDFSAAITENGELYTWGSCGEGQNGLGEDTEIPTRLHLHGKVRMVS 193

Query: 307 CGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGI-----QIEGVAAGL 361
           CG  H AV+T+ G+L   G    G+ G    D E   N  S L  I     Q+   A G 
Sbjct: 194 CGYYHMAVVTEDGSLYMCGEKEGGKLG---LDHEQLDN-TSQLQKIKSIEDQVVVAACGA 249

Query: 362 WHTICISSDGDVYAFGGNQFGQLGTGGDQAET-LPRLLDAPSLENVHSKSVSCGARHTAV 420
             T  ++ +G VY FG    GQLG G    ET  P  +  P  E V +++VSCG   TAV
Sbjct: 250 EFTAVVTKNGSVYTFGQGNQGQLGLGSSMMETEFPERI--PLFEKVKARTVSCGESFTAV 307

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNI--PSQVT-IEGCVPRNVACGWWHTLLLA 473
           I   G ++ +G  ++G+LGLGD    N   P +V        + V CG  H L+ A
Sbjct: 308 ITKHGNLYTFGDGRHGKLGLGDECFSNTFKPEKVKRFNNFTVKMVTCGGCHMLVAA 363



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 68/270 (25%), Positives = 108/270 (40%), Gaps = 63/270 (23%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
           G  F+ AI+++ +L TWGS    G+     G+  EIP    L  +  +V  + G+ H   
Sbjct: 147 GSDFSAAITENGELYTWGS---CGEGQNGLGEDTEIPTRLHLHGKVRMV--SCGYYHMAV 201

Query: 113 VTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG- 171
           VTE G +Y  G KE    G++        GLD +  +  S  L +  S   QV  ++ G 
Sbjct: 202 VTEDGSLYMCGEKE---GGKL--------GLDHEQLDNTSQ-LQKIKSIEDQVVVAACGA 249

Query: 172 ------TSSGT-DGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
                 T +G+    G G +G    ++ L     E+          FP  + L   V+  
Sbjct: 250 EFTAVVTKNGSVYTFGQGNQG----QLGLGSSMMETE---------FPERIPLFEKVKAR 296

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
           TV+ G   T  ++  G ++ +G G  G+LGLG             C  +++  ++     
Sbjct: 297 TVSCGESFTAVITKHGNLYTFGDGRHGKLGLGDE-----------CFSNTFKPEKVK--- 342

Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRHSAV 314
                      R     VK + CGG H  V
Sbjct: 343 -----------RFNNFTVKMVTCGGCHMLV 361


>gi|145528624|ref|XP_001450106.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124417706|emb|CAK82709.1| unnamed protein product [Paramecium tetraurelia]
          Length = 387

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 69/235 (29%), Positives = 113/235 (48%), Gaps = 34/235 (14%)

Query: 206 ENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSP 265
           E   A P  +  +   RI  + A   +T+A+ + G+++ WG    G+LG  +  + +  P
Sbjct: 152 EQFVAIPHQLDSDNLPRIVDIYAQHNYTMAIDEEGRIFSWGSNEFGRLGQNAFAKCMKLP 211

Query: 266 HPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFG 325
            PI    +S G  + A L+ G+                       H   I   G L ++G
Sbjct: 212 SPI----TSLGNAKIAKLALGTF----------------------HVLAIDTQGNLYSWG 245

Query: 326 WGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLG 385
            GL GQ G G+++D   P  +SSL  I+   V  G  H++ + ++G VY FG  QFGQLG
Sbjct: 246 RGLQGQLGHGNSNDCNKPTQISSLQAIR--EVTCGEAHSMALQNNGSVYVFGSGQFGQLG 303

Query: 386 TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL 440
            G  + +  P++L       +H + ++CG  H+ V+  +G +F +G N+  QLGL
Sbjct: 304 LGDYKQQDTPQMLQ------IHGEMIACGRHHSGVLTKNGALFMFGNNEQSQLGL 352



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 121/257 (47%), Gaps = 37/257 (14%)

Query: 220 GVRIATVAAGGRHTLALSDI---GQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYG 276
           G ++  +A G  H++AL ++    +++ WG     QLG  +  + V+ PH +        
Sbjct: 110 GWQLQKIAVGLDHSVALIEVEEENKIFVWGSNTYQQLGFDASEQFVAIPHQLD------- 162

Query: 277 KDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGS 336
              S  L R                +  I     ++  I + G + ++G   +G+ GQ +
Sbjct: 163 ---SDNLPR----------------IVDIYAQHNYTMAIDEEGRIFSWGSNEFGRLGQNA 203

Query: 337 TDDELS-PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLP 395
               +  P+ ++SL   +I  +A G +H + I + G++Y++G    GQLG G       P
Sbjct: 204 FAKCMKLPSPITSLGNAKIAKLALGTFHVLAIDTQGNLYSWGRGLQGQLGHGNSNDCNKP 263

Query: 396 RLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
             +   SL+ +  + V+CG  H+  + ++G V+ +G  ++GQLGLGD   ++ P  + I 
Sbjct: 264 TQIS--SLQAI--REVTCGEAHSMALQNNGSVYVFGSGQFGQLGLGDYKQQDTPQMLQIH 319

Query: 456 GCVPRNVACGWWHTLLL 472
           G     +ACG  H+ +L
Sbjct: 320 G---EMIACGRHHSGVL 333



 Score = 42.0 bits (97), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 4/71 (5%)

Query: 55  GFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
            + MAI +  ++ +WGS +   LGQ+     K  ++P P      A I K A G  H +A
Sbjct: 177 NYTMAIDEEGRIFSWGSNEFGRLGQNAF--AKCMKLPSPITSLGNAKIAKLALGTFHVLA 234

Query: 113 VTEGGEVYTWG 123
           +   G +Y+WG
Sbjct: 235 IDTQGNLYSWG 245



 Score = 39.3 bits (90), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 61/130 (46%), Gaps = 13/130 (10%)

Query: 353 QIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHS---K 409
           +IE +AA   H    S +  V+  G N+ G+LG   + +   P L D  S  + +    +
Sbjct: 58  EIEQIAASKEHWFAWS-ETQVFGCGSNKQGKLGM--NNSVNTPTLFDIFSEASQYGWQLQ 114

Query: 410 SVSCGARHTAV---IADDGKVFCWGWNKYGQLGLGDVIDR--NIPSQVTIEGCVPRNVAC 464
            ++ G  H+     + ++ K+F WG N Y QLG  D  ++   IP Q+  +  +PR V  
Sbjct: 115 KIAVGLDHSVALIEVEEENKIFVWGSNTYQQLGF-DASEQFVAIPHQLDSDN-LPRIVDI 172

Query: 465 GWWHTLLLAV 474
              H   +A+
Sbjct: 173 YAQHNYTMAI 182


>gi|119629205|gb|EAX08800.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2, isoform CRA_b [Homo sapiens]
          Length = 310

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 70/204 (34%), Positives = 110/204 (53%), Gaps = 7/204 (3%)

Query: 276 GKDRSAALSRGSVNSEGPGFRVPGNYVKGIAC----GGRHSAVITDAGALLTFGWGLYGQ 331
           G +    L  G V S     R+     K IAC     G H  + T  G + T+G   Y Q
Sbjct: 71  GTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQ 130

Query: 332 CGQGSTDDELSPNCVSS-LLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            G G+T+  L P  +S+ L   Q+  VA G +H++ ++SDG+V+A+G N  GQ+G+G   
Sbjct: 131 LGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTV 190

Query: 391 AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
            + +PR +    L+N    +++CG      + D G+V+ WG+N  GQLGLG+  ++  P 
Sbjct: 191 NQPIPRRVTG-CLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPC 249

Query: 451 QVT-IEGCVPRNVACGWWHTLLLA 473
           +V  ++G   + VACG+ HTL+L 
Sbjct: 250 RVAALQGIRVQRVACGYAHTLVLT 273



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 123/244 (50%), Gaps = 31/244 (12%)

Query: 214 LVTLNPGVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIE 272
           L +LN G +IA ++ G G H +  +  G+V+ WG+    QLG G+     ++   +PC  
Sbjct: 92  LDSLN-GKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT-----TNHGLVPCHI 145

Query: 273 SSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQC 332
           S+   ++                      V  +ACG  HS V+T  G +  +G+   GQ 
Sbjct: 146 STNLSNKQ---------------------VIEVACGSYHSLVLTSDGEVFAWGYNNSGQV 184

Query: 333 GQGSTDDELSPNCVSSLLGIQIE-GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
           G GST ++  P  V+  L  ++   +A G    + +   G+VY +G N  GQLG G    
Sbjct: 185 GSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGN 244

Query: 392 ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
           +  P  + A  L+ +  + V+CG  HT V+ D+G+V+ WG N YGQLG G+  +++ P+ 
Sbjct: 245 QPTPCRVAA--LQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 302

Query: 452 VTIE 455
           VT+E
Sbjct: 303 VTVE 306



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 91/225 (40%), Gaps = 42/225 (18%)

Query: 65  KLITWG--STDDLGQSYVTSGKHGEIPEPFPLP-TEASIVKAAAGWAHCVAVTEGGEVYT 121
           ++ TWG  +   LG     +  HG +P       +   +++ A G  H + +T  GEV+ 
Sbjct: 119 EVFTWGHNAYSQLGNG---TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFA 175

Query: 122 WGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDG--- 178
           WG+          G + +G+ +++ +  R +  L  +V       +        T     
Sbjct: 176 WGYNNS-------GQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYV 228

Query: 179 ---RGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLA 235
               G+G+ G                  G+      PC V    G+R+  VA G  HTL 
Sbjct: 229 WGYNGNGQLGL-----------------GNSGNQPTPCRVAALQGIRVQRVACGYAHTLV 271

Query: 236 LSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           L+D GQV+ WG    GQLG G++    S P P+     +  KDR+
Sbjct: 272 LTDEGQVYAWGANSYGQLGTGNKSNQ-SYPTPV-----TVEKDRT 310



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 15/112 (13%)

Query: 370 DGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFC 429
           + +++  G N  G LG G  Q+   PR LD+ + + +   S   G  H  +   +G+VF 
Sbjct: 64  NDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGP-HIVLATTEGEVFT 122

Query: 430 WGWNKYGQLGLGDV--------IDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           WG N Y QLG G          I  N+ ++  IE      VACG +H+L+L 
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIE------VACGSYHSLVLT 168



 Score = 40.8 bits (94), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 55/133 (41%), Gaps = 17/133 (12%)

Query: 14  VFMWGYL-PGALPQRSPILSPLVVRLP--LTVGSAWRDVCGGGCGFAMAISDSRKLITWG 70
           VF WGY   G +   S +  P+  R+   L         CG  C   MA+ D+ ++  WG
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMC--CMAVVDTGEVYVWG 230

Query: 71  STDDLGQSYVTSGKHGEIPEPFPLPTEASI--VKAAAGWAHCVAVTEGGEVYTWGWKECV 128
                G   +  G  G  P P  +     I   + A G+AH + +T+ G+VY WG     
Sbjct: 231 YN---GNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG----- 282

Query: 129 PSGRVFGDLSTGT 141
                +G L TG 
Sbjct: 283 --ANSYGQLGTGN 293


>gi|432847192|ref|XP_004065976.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
           latipes]
          Length = 1049

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 92/336 (27%), Positives = 132/336 (39%), Gaps = 98/336 (29%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
           G   ++A+++  ++  WG+ D       T+     IP       + SI +   G  HC+A
Sbjct: 91  GRAHSVAVNEQGQVFVWGAGDGGQLGLETAETAVRIPRLLKKLCDHSISQVVCGNQHCIA 150

Query: 113 VTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGT 172
           ++  G+++TWG                                                 
Sbjct: 151 LSRDGQLFTWG-----------------------------------------------QN 163

Query: 173 SSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRH 232
           SSG  G G GE             T++ S S  ++L+  P          +A + AGG H
Sbjct: 164 SSGQLGLGKGE-------------TSKLSPSPVKSLAGIP----------LAQITAGGDH 200

Query: 233 TLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEG 292
             ALS  G V+GWG    GQLGL  +         +PC        R             
Sbjct: 201 CFALSLSGAVFGWGKNKAGQLGLNDK-----QDRAVPCHIKFLRSQR------------- 242

Query: 293 PGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGI 352
                    V  I+CG  H+A +T +G L TFG G  GQ G GS+++EL P  V  L+G 
Sbjct: 243 ---------VVYISCGDEHTAALTKSGGLFTFGDGSRGQLGHGSSNNELLPRRVMELMGT 293

Query: 353 QIEGVAAGLWHTIC-ISSDGDVYAFGGNQFGQLGTG 387
           ++  +  G  HT+  + S G VYAFG N  GQLGTG
Sbjct: 294 EVSQITCGRHHTLAFVPSSGTVYAFGCNSHGQLGTG 329



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 121/274 (44%), Gaps = 28/274 (10%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLG---LGSRIRMVSSPHPIPCIESSYGKDR 279
           +  VA GG+HTL L   G V+  G    GQLG    G+   +V +         S G+  
Sbjct: 35  LKEVACGGQHTLFLLQDGSVYTCGSNSCGQLGHDKAGNSPELVGALDTQKITMVSCGRAH 94

Query: 280 SAALS-RGSVNSEGPG-------------FRVP-------GNYVKGIACGGRHSAVITDA 318
           S A++ +G V   G G              R+P        + +  + CG +H   ++  
Sbjct: 95  SVAVNEQGQVFVWGAGDGGQLGLETAETAVRIPRLLKKLCDHSISQVVCGNQHCIALSRD 154

Query: 319 GALLTFGWGLYGQCGQGSTD-DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
           G L T+G    GQ G G  +  +LSP+ V SL GI +  + AG  H   +S  G V+ +G
Sbjct: 155 GQLFTWGQNSSGQLGLGKGETSKLSPSPVKSLAGIPLAQITAGGDHCFALSLSGAVFGWG 214

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQ 437
            N+ GQLG    Q   +P       L +     +SCG  HTA +   G +F +G    GQ
Sbjct: 215 KNKAGQLGLNDKQDRAVP--CHIKFLRSQRVVYISCGDEHTAALTKSGGLFTFGDGSRGQ 272

Query: 438 LGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
           LG G   +  +P +V  + G     + CG  HTL
Sbjct: 273 LGHGSSNNELLPRRVMELMGTEVSQITCGRHHTL 306



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 101/233 (43%), Gaps = 33/233 (14%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I+ V  G +H +ALS  GQ++ WG    GQLGLG                    K  ++ 
Sbjct: 138 ISQVVCGNQHCIALSRDGQLFTWGQNSSGQLGLG--------------------KGETSK 177

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY--GQCGQGSTDDE 340
           LS   V S      + G  +  I  GG H   ++ +GA+  FGWG    GQ G     D 
Sbjct: 178 LSPSPVKS------LAGIPLAQITAGGDHCFALSLSGAV--FGWGKNKAGQLGLNDKQDR 229

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
             P  +  L   ++  ++ G  HT  ++  G ++ FG    GQLG G    E LPR    
Sbjct: 230 AVPCHIKFLRSQRVVYISCGDEHTAALTKSGGLFTFGDGSRGQLGHGSSNNELLPR--RV 287

Query: 401 PSLENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
             L       ++CG  HT A +   G V+ +G N +GQLG G + D   P  V
Sbjct: 288 MELMGTEVSQITCGRHHTLAFVPSSGTVYAFGCNSHGQLGTGILADLRSPHPV 340



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/121 (35%), Positives = 58/121 (47%), Gaps = 5/121 (4%)

Query: 321 LLTFGWGLYGQCGQGST-DDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN 379
           +L +G    GQ G G   +    P       G  ++ VA G  HT+ +  DG VY  G N
Sbjct: 1   MLCWGNARDGQLGIGVEGNPVFEPRICHVFSGRGLKEVACGGQHTLFLLQDGSVYTCGSN 60

Query: 380 QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG 439
             GQL  G D+A   P L+ A   + +    VSCG  H+  + + G+VF WG    GQLG
Sbjct: 61  SCGQL--GHDKAGNSPELVGALDTQKI--TMVSCGRAHSVAVNEQGQVFVWGAGDGGQLG 116

Query: 440 L 440
           L
Sbjct: 117 L 117



 Score = 45.8 bits (107), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 73/299 (24%), Positives = 116/299 (38%), Gaps = 61/299 (20%)

Query: 36  VRLP-----LTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPE 90
           VR+P     L   S  + VCG      +A+S   +L TWG     GQ  +  G+  ++  
Sbjct: 124 VRIPRLLKKLCDHSISQVVCGNQ--HCIALSRDGQLFTWGQNSS-GQLGLGKGETSKL-S 179

Query: 91  PFPLPTEASI--VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVF 148
           P P+ + A I   +  AG  HC A++  G V+ WG  +        G L      D+ V 
Sbjct: 180 PSPVKSLAGIPLAQITAGGDHCFALSLSGAVFGWGKNKA-------GQLGLNDKQDRAVP 232

Query: 149 ERQSSFLTEQV-------SPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESS 201
                  +++V          + +++S G  + G   RG    GS    + L ++  E  
Sbjct: 233 CHIKFLRSQRVVYISCGDEHTAALTKSGGLFTFGDGSRGQLGHGSSNNEL-LPRRVMELM 291

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLAL-SDIGQVWGWGYGGEGQLGLGSRIR 260
                             G  ++ +  G  HTLA     G V+ +G    GQLG G  + 
Sbjct: 292 ------------------GTEVSQITCGRHHTLAFVPSSGTVYAFGCNSHGQLGTGI-LA 332

Query: 261 MVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVK----GIACGGRHSAVI 315
            + SPHP+           +  L +G V       R+   ++K     I CGG HS ++
Sbjct: 333 DLRSPHPVK------NDFLTLNLRKGKVY-----LRIDTGFLKYTVIKIICGGDHSFLM 380


>gi|428178444|gb|EKX47319.1| hypothetical protein GUITHDRAFT_42892, partial [Guillardia theta
           CCMP2712]
          Length = 240

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 75/226 (33%), Positives = 110/226 (48%), Gaps = 29/226 (12%)

Query: 219 PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
           P V + + + GG HTL LS  G+V+ +G G  G+LG G+  R  S P PI  +ES     
Sbjct: 42  PNVFVVSASCGGMHTLLLSKEGKVFSFGDGANGRLGHGN-CRNYSLPQPIASLESKR--- 97

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
                                  +  IA G  HS  I D G L T+G G  G+ G G+  
Sbjct: 98  -----------------------ITFIAAGWTHSMAIDDDGKLFTWGCGNAGRLGHGNVL 134

Query: 339 DELSPNCVSSLLGIQIEGV-AAGLW-HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPR 396
           D   P  V  L  I+++ + A+G + H+     +G V+ +G  + GQLG G  ++   P 
Sbjct: 135 DVWRPRFVDRLYRIRMKAMMASGSYDHSAVCCENGTVWTWGLGEHGQLGVGSTESHLEPV 194

Query: 397 LLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGD 442
           L+ + +  N+H   VSCG  HTA + +DG +  WG   +GQLG G+
Sbjct: 195 LVKSMADANLHIVEVSCGGAHTAAVTNDGTLLTWGRGDWGQLGHGN 240



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 71/170 (41%), Gaps = 15/170 (8%)

Query: 88  IPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDV 147
           +P+P        I   AAGW H +A+ + G+++TWG   C  +GR+      G G   DV
Sbjct: 86  LPQPIASLESKRITFIAAGWTHSMAIDDDGKLFTWG---CGNAGRL------GHGNVLDV 136

Query: 148 FERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDEN 207
           +  +  F+      R +   +SG      D      E        L +       S + +
Sbjct: 137 WRPR--FVDRLYRIRMKAMMASG----SYDHSAVCCENGTVWTWGLGEHGQLGVGSTESH 190

Query: 208 LSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS 257
           L         +  + I  V+ GG HT A+++ G +  WG G  GQLG G+
Sbjct: 191 LEPVLVKSMADANLHIVEVSCGGAHTAAVTNDGTLLTWGRGDWGQLGHGN 240



 Score = 39.7 bits (91), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 34/60 (56%)

Query: 414 GARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           G  H A+++  G V+ WG N +GQLG       ++PS++ +      + +CG  HTLLL+
Sbjct: 1   GPYHAALVSGLGDVYTWGANFFGQLGRDYSRLWSLPSELHLPNVFVVSASCGGMHTLLLS 60


>gi|89130650|gb|AAI14321.1| Wu:fc44f06 protein [Danio rerio]
          Length = 388

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 110/241 (45%), Gaps = 39/241 (16%)

Query: 272 ESSYGKDRSAAL---SRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL 328
           E     + +AAL   S G V  + P F         +  G  H+ ++T  G L ++G G 
Sbjct: 134 EHELSAEHTAALPLVSGGFVQHKPPFFHPLKLCAVSLVLGSEHALLLTADGTLYSWGSGS 193

Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQL---- 384
           +GQ G G       P  V +L G+ I+ VAAG WH+  +SS GD+Y +G N+ GQL    
Sbjct: 194 HGQLGHGVLTSLEDPQAVEALWGVPIKAVAAGNWHSAAVSSGGDLYMWGWNESGQLGLPS 253

Query: 385 -----------GTGGDQA----------------ETLPRLLDAPSLENVHSKSVSCGARH 417
                      G+G D                  +  P L+D  ++  +    +SCG+RH
Sbjct: 254 RGLEEEKRRGNGSGNDDQPINTDGKSRTDVFISIQAFPALVDIANMSEI--SRISCGSRH 311

Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV---TIEGCVPRNVACGWWHTLLLAV 474
           TA +   G ++ WGW +YGQLG G     + P+ V   +      ++V CG W+T +  V
Sbjct: 312 TAAVTSAGDLYTWGWGQYGQLGHGTEHSTDEPTPVDYFSSHSLSVKDVVCGSWNTFVSVV 371

Query: 475 P 475
           P
Sbjct: 372 P 372



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 67/255 (26%), Positives = 100/255 (39%), Gaps = 57/255 (22%)

Query: 22  GALPQRSPILSPL-VVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTD--DLGQS 78
           G +  + P   PL +  + L +GS            A+ ++    L +WGS     LG  
Sbjct: 151 GFVQHKPPFFHPLKLCAVSLVLGSE----------HALLLTADGTLYSWGSGSHGQLGHG 200

Query: 79  YVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLS 138
            +TS    E P+         I   AAG  H  AV+ GG++Y WGW E   SG++     
Sbjct: 201 VLTSL---EDPQAVEALWGVPIKAVAAGNWHSAAVSSGGDLYMWGWNE---SGQL----- 249

Query: 139 TGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTA 198
              GL     E +                   G  SG D +    +G  R  + ++ Q  
Sbjct: 250 ---GLPSRGLEEEKRR----------------GNGSGNDDQPINTDGKSRTDVFISIQ-- 288

Query: 199 ESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR 258
                      AFP LV +     I+ ++ G RHT A++  G ++ WG+G  GQLG G+ 
Sbjct: 289 -----------AFPALVDIANMSEISRISCGSRHTAAVTSAGDLYTWGWGQYGQLGHGTE 337

Query: 259 IRMVSSPHPIPCIES 273
                 P P+    S
Sbjct: 338 -HSTDEPTPVDYFSS 351


>gi|444911573|ref|ZP_21231747.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444717927|gb|ELW58746.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 708

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 90/272 (33%), Positives = 134/272 (49%), Gaps = 33/272 (12%)

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESS---------- 274
           TV+AG  H+LA+S  G VW WG    GQLG+     ++S P  +P +  S          
Sbjct: 214 TVSAGANHSLAVSADGTVWAWGDNSHGQLGIARTTPLLSIPGRVPEVRGSVAMAAGDNHS 273

Query: 275 -----------YGKDRSAALSRG-SVNSEGPGFRVPG-NYVKGIACGGRHSAVITDAGAL 321
                      +G +    L  G  V++  PG RVPG   V  +A G  HS  + D G +
Sbjct: 274 LAVRDDGTVWAWGSNGHGQLGNGFMVDNSEPG-RVPGLEGVGAVAAGSNHSLAVRDDGTV 332

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             +G  + GQ G G+T    +P  V  +    + GVAA ++H++ +S+DG  +A+G N  
Sbjct: 333 WAWGSNVEGQRGDGTTGQLSAPTRVPGV--SGVVGVAANVFHSLAVSADGSAWAWGHNSH 390

Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
           G+LG G  +    P  +D   L+ V   +V+ G+ H+  +  DG V  WG N +GQLG G
Sbjct: 391 GELGDGSTRNSPAPVRVDG--LKEV--VAVAAGSSHSLALLADGTVLAWGDNTFGQLGDG 446

Query: 442 DVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
                ++P+QV  + G V   VA G  H+L L
Sbjct: 447 TRASHSVPAQVRGLRGVVA--VAAGSSHSLAL 476



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 95/274 (34%), Positives = 133/274 (48%), Gaps = 33/274 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS--------RIRMVSSP--------H 266
           + TVAAGG H+LA+   G VW WG    GQLG GS        R+R +S          H
Sbjct: 62  VVTVAAGGGHSLAVHSDGTVWAWGNNSSGQLGDGSFDNRAEPVRVRGLSGVVAVAAGGYH 121

Query: 267 PIPCIES----SYGKDRSAALSRGSVNSEGPGFRV-PGNYVKGIACGGRHSAVITDAGAL 321
            +         ++G + S  L  GS ++     RV   + V  +A GG HS  +   G L
Sbjct: 122 SLAVSADGTVWAWGNNSSGQLGDGSFDNRAEPVRVRGSSGVVAVAAGGAHSLAVRSDGIL 181

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             +G  LYGQ G     +   P  V  + G     V+AG  H++ +S+DG V+A+G N  
Sbjct: 182 WAWGDNLYGQLGNRGEFNSSEPVQVLRVTGGVT--VSAGANHSLAVSADGTVWAWGDNSH 239

Query: 382 GQLGTGGDQAETLPRLLDAPSL--ENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG 439
           GQLG     A T P LL  P    E   S +++ G  H+  + DDG V+ WG N +GQLG
Sbjct: 240 GQLGI----ARTTP-LLSIPGRVPEVRGSVAMAAGDNHSLAVRDDGTVWAWGSNGHGQLG 294

Query: 440 LGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
            G ++D + P +V  +EG     VA G  H+L +
Sbjct: 295 NGFMVDNSEPGRVPGLEGVGA--VAAGSNHSLAV 326



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 124/452 (27%), Positives = 181/452 (40%), Gaps = 72/452 (15%)

Query: 24  LPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSG 83
           + + +P+LS +  R+P   GS        G   ++A+ D   +  WGS    G   + +G
Sbjct: 244 IARTTPLLS-IPGRVPEVRGSV---AMAAGDNHSLAVRDDGTVWAWGSN---GHGQLGNG 296

Query: 84  KHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTG--T 141
              +  EP  +P    +   AAG  H +AV + G V+ WG    V   R  GD +TG  +
Sbjct: 297 FMVDNSEPGRVPGLEGVGAVAAGSNHSLAVRDDGTVWAWG--SNVEGQR--GDGTTGQLS 352

Query: 142 GLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESS 201
              +         +   V     VS      + G +  G   +GS R             
Sbjct: 353 APTRVPGVSGVVGVAANVFHSLAVSADGSAWAWGHNSHGELGDGSTRNS----------- 401

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
                     P  V ++    +  VAAG  H+LAL   G V  WG    GQLG G+R   
Sbjct: 402 ----------PAPVRVDGLKEVVAVAAGSSHSLALLADGTVLAWGDNTFGQLGDGTR--- 448

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
             + H +P                     +  G R     V  +A G  HS  +   G +
Sbjct: 449 --ASHSVPA--------------------QVRGLR----GVVAVAAGSSHSLALLADGTV 482

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
            T+G+ L GQ G G+T     P  V  L G+    VAAG  H++ + SDG  +A+G N  
Sbjct: 483 WTWGYNLNGQLGDGTTTYRYEPVAVKGLEGVVA--VAAGGNHSLAVRSDGTAWAWGENVK 540

Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
           GQLG G   +   P  + A +     ++ +S        +  DG  + WG N  GQLG G
Sbjct: 541 GQLGDGTLTSRPAPVEVKAAAKAVAAAQGLSL------AVGSDGFPWAWGNNSSGQLGDG 594

Query: 442 DVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
               R +P +V   G V   VA G  H+L L+
Sbjct: 595 STTSRPMPMRVQGAGEVVA-VAAGNGHSLALS 625



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 91/333 (27%), Positives = 128/333 (38%), Gaps = 58/333 (17%)

Query: 84  KHGEI--------PEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFG 135
            HGE+        P P  +     +V  AAG +H +A+   G V  WG          FG
Sbjct: 389 SHGELGDGSTRNSPAPVRVDGLKEVVAVAAGSSHSLALLADGTVLAWG-------DNTFG 441

Query: 136 DLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAK 195
            L  GT        R S  +  QV     V   + G+S        G   +     +L  
Sbjct: 442 QLGDGT--------RASHSVPAQVRGLRGVVAVAAGSSHSLALLADGTVWTWG--YNLNG 491

Query: 196 QTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGL 255
           Q  +    G       P  V    GV    VAAGG H+LA+   G  W WG   +GQLG 
Sbjct: 492 QLGD----GTTTYRYEPVAVKGLEGV--VAVAAGGNHSLAVRSDGTAWAWGENVKGQLGD 545

Query: 256 GSRIRMVSSPHPIPCIES---------------------SYGKDRSAALSRGSVNSEGPG 294
           G+   + S P P+    +                     ++G + S  L  GS  S    
Sbjct: 546 GT---LTSRPAPVEVKAAAKAVAAAQGLSLAVGSDGFPWAWGNNSSGQLGDGSTTSRPMP 602

Query: 295 FRVPG-NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ 353
            RV G   V  +A G  HS  ++  G +  +G    GQ G+G+ D  L+P  V  L G+ 
Sbjct: 603 MRVQGAGEVVAVAAGNGHSLALSPEGGVWAWGQNARGQLGEGTLDRRLAPTRVQGLSGVV 662

Query: 354 IEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
                     ++ +  DG V+++G N FGQLG 
Sbjct: 663 AVAAGGAF--SLAVRDDGSVWSWGDNAFGQLGN 693



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 54/148 (36%), Positives = 72/148 (48%), Gaps = 6/148 (4%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           IA GG HS  +   G +   G    GQ G G+T     P  V  L G+    VAAG  H+
Sbjct: 15  IATGGSHSLSVHQDGTVWAVGGNSVGQLGDGTTSLRRVPVRVLGLSGVVT--VAAGGGHS 72

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           + + SDG V+A+G N  GQLG G       P  +    L  V   +V+ G  H+  ++ D
Sbjct: 73  LAVHSDGTVWAWGNNSSGQLGDGSFDNRAEP--VRVRGLSGV--VAVAAGGYHSLAVSAD 128

Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
           G V+ WG N  GQLG G   +R  P +V
Sbjct: 129 GTVWAWGNNSSGQLGDGSFDNRAEPVRV 156



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 63/123 (51%), Gaps = 9/123 (7%)

Query: 357 VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLP-RLLDAPSLENVHSKSVSCGA 415
           +A G  H++ +  DG V+A GGN  GQLG G      +P R+L    +      +V+ G 
Sbjct: 15  IATGGSHSLSVHQDGTVWAVGGNSVGQLGDGTTSLRRVPVRVLGLSGV-----VTVAAGG 69

Query: 416 RHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLAV 474
            H+  +  DG V+ WG N  GQLG G   +R  P +V  + G V   VA G +H+L ++ 
Sbjct: 70  GHSLAVHSDGTVWAWGNNSSGQLGDGSFDNRAEPVRVRGLSGVVA--VAAGGYHSLAVSA 127

Query: 475 PPT 477
             T
Sbjct: 128 DGT 130


>gi|47221092|emb|CAG12786.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 527

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 73/231 (31%), Positives = 115/231 (49%), Gaps = 30/231 (12%)

Query: 203 SGDENLSAFPCLVTLNP-GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +G  N    P LV+ N  G R+  VA G  HT+AL+  G+V+ WGY   GQ+G GS    
Sbjct: 109 NGTTNHGLTPALVSTNLLGKRVIEVACGSHHTIALTTDGEVFAWGYNNSGQVGSGS---- 164

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
            ++  P P   SS  ++++                     V  IACG   S  + D+G +
Sbjct: 165 -TANQPTPRRVSSCLQNKA---------------------VVNIACGQLCSMAVLDSGEI 202

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             +G+   GQ G G+  ++ +P  +++L G+ +  VA G  HT+ ++ +G VYA+G N +
Sbjct: 203 YGWGYNCNGQLGLGNNGNQQTPCRIAALQGVSVIQVACGYAHTLALTDEGFVYAWGANSY 262

Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           GQLGTG    + LP L++    +   ++  +C   HT A     G+V  WG
Sbjct: 263 GQLGTGNKCNQALPTLINTD--KERMAEVAACHTSHTSAAKTQSGQVLMWG 311



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 61/166 (36%), Positives = 100/166 (60%), Gaps = 3/166 (1%)

Query: 309 GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS-LLGIQIEGVAAGLWHTICI 367
           G H A+ T  G + ++G   Y Q G G+T+  L+P  VS+ LLG ++  VA G  HTI +
Sbjct: 84  GPHVAIATADGEVFSWGHNGYSQLGNGTTNHGLTPALVSTNLLGKRVIEVACGSHHTIAL 143

Query: 368 SSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKV 427
           ++DG+V+A+G N  GQ+G+G    +  PR + +  L+N    +++CG   +  + D G++
Sbjct: 144 TTDGEVFAWGYNNSGQVGSGSTANQPTPRRVSS-CLQNKAVVNIACGQLCSMAVLDSGEI 202

Query: 428 FCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
           + WG+N  GQLGLG+  ++  P ++  ++G     VACG+ HTL L
Sbjct: 203 YGWGYNCNGQLGLGNNGNQQTPCRIAALQGVSVIQVACGYAHTLAL 248



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 125/253 (49%), Gaps = 31/253 (12%)

Query: 220 GVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
           G +I +++ G G H    +  G+V+ WG+ G  QLG G+               +++G  
Sbjct: 73  GKKIVSLSYGTGPHVAIATADGEVFSWGHNGYSQLGNGT---------------TNHG-- 115

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
               L+   V++   G RV       +ACG  H+  +T  G +  +G+   GQ G GST 
Sbjct: 116 ----LTPALVSTNLLGKRVIE-----VACGSHHTIALTTDGEVFAWGYNNSGQVGSGSTA 166

Query: 339 DELSPNCVSSLLGIQ-IEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
           ++ +P  VSS L  + +  +A G   ++ +   G++Y +G N  GQLG G +  +  P  
Sbjct: 167 NQPTPRRVSSCLQNKAVVNIACGQLCSMAVLDSGEIYGWGYNCNGQLGLGNNGNQQTPCR 226

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEG 456
           + A  L+ V    V+CG  HT  + D+G V+ WG N YGQLG G+  ++ +P+ + T + 
Sbjct: 227 IAA--LQGVSVIQVACGYAHTLALTDEGFVYAWGANSYGQLGTGNKCNQALPTLINTDKE 284

Query: 457 CVPRNVACGWWHT 469
            +    AC   HT
Sbjct: 285 RMAEVAACHTSHT 297



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/110 (37%), Positives = 55/110 (50%), Gaps = 3/110 (2%)

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           I ++ + +V+A G N  G LG G  Q+   PR +DA   + + S S   G  H A+   D
Sbjct: 35  IYVTVNDEVFALGTNCSGCLGLGDLQSTIEPRRIDALCGKKIVSLSYGTGP-HVAIATAD 93

Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPR--NVACGWWHTLLL 472
           G+VF WG N Y QLG G       P+ V+      R   VACG  HT+ L
Sbjct: 94  GEVFSWGHNGYSQLGNGTTNHGLTPALVSTNLLGKRVIEVACGSHHTIAL 143



 Score = 40.0 bits (92), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 60/135 (44%), Gaps = 13/135 (9%)

Query: 14  VFMWGYL-PGALPQRSPILSPLVVRLP--LTVGSAWRDVCGGGCGFAMAISDSRKLITWG 70
           VF WGY   G +   S    P   R+   L   +     CG  C  +MA+ DS ++  WG
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKAVVNIACGQLC--SMAVLDSGEIYGWG 206

Query: 71  STDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPS 130
              + GQ  + +  + + P         S+++ A G+AH +A+T+ G VY WG       
Sbjct: 207 YNCN-GQLGLGNNGNQQTPCRIAALQGVSVIQVACGYAHTLALTDEGFVYAWG------- 258

Query: 131 GRVFGDLSTGTGLDK 145
              +G L TG   ++
Sbjct: 259 ANSYGQLGTGNKCNQ 273


>gi|395848168|ref|XP_003796731.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Otolemur
           garnettii]
          Length = 551

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 64/176 (36%), Positives = 102/176 (57%), Gaps = 7/176 (3%)

Query: 303 KGIAC----GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS-LLGIQIEGV 357
           K IAC     G H  + T  G + T+G   Y Q G G+T+  L P  +S+ L   Q+  V
Sbjct: 98  KKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV 157

Query: 358 AAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARH 417
           A G +H++ ++SDG+V+A+G N  GQ+G+G    + +PR +    L+N    +++CG   
Sbjct: 158 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTG-CLQNKVIVTIACGQMC 216

Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
           +  + D G+VF WG+N  GQLGLG   ++  P ++  ++G   + VACG+ HTL+L
Sbjct: 217 SMAVVDTGEVFVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVL 272



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 123/253 (48%), Gaps = 31/253 (12%)

Query: 220 GVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
           G +IA ++ G G H +  +  G+V+ WG+    QLG G+     ++   +PC  S+    
Sbjct: 97  GKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLGNGT-----TNHGLVPCHIST---- 147

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
                             +    V  +ACG  HS V+T  G +  +G+   GQ G GST 
Sbjct: 148 -----------------NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTA 190

Query: 339 DELSPNCVSSLLGIQ-IEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
           ++  P  V+  L  + I  +A G   ++ +   G+V+ +G N  GQLG G    +  P  
Sbjct: 191 NQPIPRRVTGCLQNKVIVTIACGQMCSMAVVDTGEVFVWGYNGNGQLGLGSSGNQPTPCR 250

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE-G 456
           + A  L+ +  + V+CG  HT V+ D+G+V+ WG N YGQLG G+  +++ P+ V +E  
Sbjct: 251 IAA--LQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVVEKD 308

Query: 457 CVPRNVACGWWHT 469
            V    AC   HT
Sbjct: 309 RVIEIAACHSAHT 321



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 114/233 (48%), Gaps = 34/233 (14%)

Query: 203 SGDENLSAFPCLVTLN-PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +G  N    PC ++ N    ++  VA G  H+L L+  G+V+ WGY   GQ+G GS    
Sbjct: 133 NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---- 188

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
            ++  PIP         R     +  V             +  IACG   S  + D G +
Sbjct: 189 -TANQPIP--------RRVTGCLQNKV-------------IVTIACGQMCSMAVVDTGEV 226

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             +G+   GQ G GS+ ++ +P  +++L GI+++ VA G  HT+ ++ +G VYA+G N +
Sbjct: 227 FVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSY 286

Query: 382 GQLGTGG--DQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           GQLGTG   +Q+   P +++   +  +     +C + HT A     G V+ WG
Sbjct: 287 GQLGTGNKSNQSYPTPVVVEKDRVIEI----AACHSAHTSAAKTQGGHVYMWG 335



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 15/111 (13%)

Query: 370 DGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFC 429
           + +++  G N  G LG G  Q+   PR LD+ S + +   S   G  H  +   +G+VF 
Sbjct: 64  NDEIFVLGTNCCGCLGLGDIQSTIEPRKLDSLSGKKIACLSYGSGP-HVVLATTEGEVFT 122

Query: 430 WGWNKYGQLGLGDV--------IDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           WG N Y QLG G          I  N+ ++  IE      VACG +H+L+L
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIE------VACGSYHSLVL 167



 Score = 38.1 bits (87), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 55/133 (41%), Gaps = 17/133 (12%)

Query: 14  VFMWGYL-PGALPQRSPILSPLVVRLP--LTVGSAWRDVCGGGCGFAMAISDSRKLITWG 70
           VF WGY   G +   S    P+  R+   L         CG  C  +MA+ D+ ++  WG
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVIVTIACGQMC--SMAVVDTGEVFVWG 230

Query: 71  STDDLGQSYVTSGKHGEIPEPFPLPTEASI--VKAAAGWAHCVAVTEGGEVYTWGWKECV 128
                G   +  G  G  P P  +     I   + A G+AH + +T+ G+VY WG     
Sbjct: 231 YN---GNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWG----- 282

Query: 129 PSGRVFGDLSTGT 141
                +G L TG 
Sbjct: 283 --ANSYGQLGTGN 293


>gi|291407336|ref|XP_002719873.1| PREDICTED: retinitis pigmentosa GTPase regulator-like [Oryctolagus
           cuniculus]
          Length = 882

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 143/298 (47%), Gaps = 45/298 (15%)

Query: 213 CLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR--------IRMVSS 264
           C+  L P  ++  VA G  HTL  ++ G V+  G   +GQLGLG          I   +S
Sbjct: 80  CVKALKPE-KVKYVACGRNHTLVSTEEGNVYATGGNNDGQLGLGDTEGRNTFYPISFFTS 138

Query: 265 PHPIPCIESSYGKDRSAALSRGSV------NSEGP-GFR------VPGNYVKG-----IA 306
            H I  +  S G + SAAL+          NSEG  G +      VP     G     I+
Sbjct: 139 QHKIKQL--SAGSNTSAALTENGELFMWGDNSEGQIGLKNVTNVCVPHQVTIGKPISWIS 196

Query: 307 CGGRHSAVITDAGALLTFGWGLYGQCG--QGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           CG  HSA +T  G L TFG    G+ G  +    +  +P  V+ +    I+ VA G  HT
Sbjct: 197 CGYYHSAFVTMDGELYTFGECENGKLGLPEELLINHKTPQLVTRIPEKVIQ-VACGGGHT 255

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAET-LPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
           + ++ +  VY FG  QFGQLG G    ET  P+ ++   +++    S+SCG  HTA+I +
Sbjct: 256 VVLT-ETIVYTFGLGQFGQLGLGTFIFETSEPKAIEY--IKDHKISSISCGENHTALITE 312

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC------VPRNVACGWWHTLLLAVP 475
            G+++ +G  +YG+LGLG     N  +Q     C      + + VACG  H ++ A P
Sbjct: 313 LGRMYTFGDGRYGKLGLG---LENFTNQFVPTLCCDFLRFMIQLVACGGCHMVIFATP 367



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 93/171 (54%), Gaps = 4/171 (2%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           ++CG  H+AV+T    L  FG   +GQ G GS      P CV +L   +++ VA G  HT
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKTTINKPTCVKALKPEKVKYVACGRNHT 99

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHS-KSVSCGARHTAVIAD 423
           +  + +G+VYA GGN  GQLG G  +              + H  K +S G+  +A + +
Sbjct: 100 LVSTEEGNVYATGGNNDGQLGLGDTEGRNT--FYPISFFTSQHKIKQLSAGSNTSAALTE 157

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAV 474
           +G++F WG N  GQ+GL +V +  +P QVTI G     ++CG++H+  + +
Sbjct: 158 NGELFMWGDNSEGQIGLKNVTNVCVPHQVTI-GKPISWISCGYYHSAFVTM 207



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 72/283 (25%), Positives = 129/283 (45%), Gaps = 46/283 (16%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM-----VSSPHPIPCIESSYGKDRS 280
           ++ G  HT  ++   +++ +G    GQLGLGS+  +     V +  P      + G++ +
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKTTINKPTCVKALKPEKVKYVACGRNHT 99

Query: 281 -AALSRGSV-----NSEGP---------------GFRVPGNYVKGIACGGRHSAVITDAG 319
             +   G+V     N++G                 F    + +K ++ G   SA +T+ G
Sbjct: 100 LVSTEEGNVYATGGNNDGQLGLGDTEGRNTFYPISFFTSQHKIKQLSAGSNTSAALTENG 159

Query: 320 ALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN 379
            L  +G    GQ G  +  +   P+ V+  +G  I  ++ G +H+  ++ DG++Y FG  
Sbjct: 160 ELFMWGDNSEGQIGLKNVTNVCVPHQVT--IGKPISWISCGYYHSAFVTMDGELYTFGEC 217

Query: 380 QFGQLGTGGDQAETLPRLL----DAPSL-ENVHSK--SVSCGARHTAVIADDGKVFCWGW 432
           + G+LG        LP  L      P L   +  K   V+CG  HT V+  +  V+ +G 
Sbjct: 218 ENGKLG--------LPEELLINHKTPQLVTRIPEKVIQVACGGGHTVVLT-ETIVYTFGL 268

Query: 433 NKYGQLGLGDVI-DRNIPSQVT-IEGCVPRNVACGWWHTLLLA 473
            ++GQLGLG  I + + P  +  I+     +++CG  HT L+ 
Sbjct: 269 GQFGQLGLGTFIFETSEPKAIEYIKDHKISSISCGENHTALIT 311



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 51/161 (31%), Positives = 72/161 (44%), Gaps = 32/161 (19%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSD-IGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPC 270
           P LVT  P  ++  VA GG HT+ L++ I   +G G  G  QLGLG+ I   S P  I  
Sbjct: 235 PQLVTRIPE-KVIQVACGGGHTVVLTETIVYTFGLGQFG--QLGLGTFIFETSEPKAI-- 289

Query: 271 IESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
               Y KD                       +  I+CG  H+A+IT+ G + TFG G YG
Sbjct: 290 ---EYIKDHK---------------------ISSISCGENHTALITELGRMYTFGDGRYG 325

Query: 331 QCGQGSTD--DELSPNCVSSLLGIQIEGVAAGLWHTICISS 369
           + G G  +  ++  P      L   I+ VA G  H +  ++
Sbjct: 326 KLGLGLENFTNQFVPTLCCDFLRFMIQLVACGGCHMVIFAT 366


>gi|355715932|gb|AES05447.1| regulator of chromosome condensation and BTB domain containing
           protein 2 [Mustela putorius furo]
          Length = 344

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 125/244 (51%), Gaps = 31/244 (12%)

Query: 214 LVTLNPGVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIE 272
           L +LN G +IA ++ G G H +  +  G+V+ WG+    QLG G+     ++   +PC  
Sbjct: 21  LESLN-GKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT-----TNHGLVPCHI 74

Query: 273 SSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQC 332
           S+   ++                      V  +ACG  HS V+T  G +  +G+   GQ 
Sbjct: 75  STNLSNKQ---------------------VTEVACGSYHSLVLTSDGEVFAWGYNNSGQV 113

Query: 333 GQGSTDDELSPNCVSSLLGIQIE-GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
           G GST ++L P  V+  L  ++   +A G   ++ + + G+VY +G N  GQLG G    
Sbjct: 114 GSGSTANQLIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGN 173

Query: 392 ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
           +  P  + A  L+ +  + V+CG  HT V+ D+G+V+ WG N YGQLG G+  +++ P+ 
Sbjct: 174 QPTPCRIAA--LQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAP 231

Query: 452 VTIE 455
           V +E
Sbjct: 232 VVVE 235



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 102/176 (57%), Gaps = 7/176 (3%)

Query: 303 KGIAC----GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS-LLGIQIEGV 357
           K IAC     G H  + T  G + T+G   Y Q G G+T+  L P  +S+ L   Q+  V
Sbjct: 27  KKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEV 86

Query: 358 AAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARH 417
           A G +H++ ++SDG+V+A+G N  GQ+G+G    + +PR +    L+N    +++CG   
Sbjct: 87  ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQLIPRRVTG-CLQNKVVVNIACGQMC 145

Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
           +  + + G+V+ WG+N  GQLGLG   ++  P ++  ++G   + VACG+ HTL+L
Sbjct: 146 SMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVL 201



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 111/233 (47%), Gaps = 34/233 (14%)

Query: 203 SGDENLSAFPCLVTLN-PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +G  N    PC ++ N    ++  VA G  H+L L+  G+V+ WGY   GQ+G GS    
Sbjct: 62  NGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ 121

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
           +       C+++                            V  IACG   S  + + G +
Sbjct: 122 LIPRRVTGCLQNKV--------------------------VVNIACGQMCSMAVVNTGEV 155

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             +G+   GQ G GS+ ++ +P  +++L GI+++ VA G  HT+ ++ +G VYA+G N +
Sbjct: 156 YVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSY 215

Query: 382 GQLGTGG--DQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           GQLGTG   +Q+   P +++   +  +     +C + HT A     G V+ WG
Sbjct: 216 GQLGTGNKSNQSYPAPVVVEKDRIIEI----AACHSAHTSAAKTQGGHVYMWG 264


>gi|195345959|ref|XP_002039536.1| GM23027 [Drosophila sechellia]
 gi|194134762|gb|EDW56278.1| GM23027 [Drosophila sechellia]
          Length = 3806

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 122/255 (47%), Gaps = 36/255 (14%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GG+H LAL+  G+V+ WG G +G+LG G+R              ++  K R 
Sbjct: 2728 VKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNR--------------TTLDKPRL 2773

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                R                ++ +ACG  HSA I+  G L T+G G YG+ G G    +
Sbjct: 2774 VEALR-------------AKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQ 2820

Query: 341  LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V++L G ++  VA G     T+ ++ DG V+++G   FG+LG GG +    P  +
Sbjct: 2821 LKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEI 2880

Query: 399  DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCV 458
            +   L  +    + CGA+ +  +   G+V+ WG   Y +LG G   D+++     I G  
Sbjct: 2881 E--RLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGG--DQHVRKPQPIGGLR 2936

Query: 459  PR---NVACGWWHTL 470
             R   +VA G  H L
Sbjct: 2937 GRRVIHVAVGALHCL 2951



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 114/255 (44%), Gaps = 30/255 (11%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            +R   +A G +    +S  G+V+  G G  G+LGLG     V  PH +P +     K   
Sbjct: 2674 LRPIHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLGV-THNVPLPHQLPVLHQYVVKK-- 2730

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                    +  GG+H+  +T  G + ++G G  G+ G G+    
Sbjct: 2731 ----------------------VAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTL 2768

Query: 341  LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
              P  V +L   +I  VA G  H+  ISS G++Y +G  ++G+LG G +  +  P+L+ A
Sbjct: 2769 DKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTA 2828

Query: 401  PSLENVHSKSVSCGAR--HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGC 457
              L       V+CG+R   T  + +DG VF WG   +G+LG G     + P ++  + G 
Sbjct: 2829 --LAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGI 2886

Query: 458  VPRNVACGWWHTLLL 472
                + CG   +L L
Sbjct: 2887 GVVQIECGAQFSLAL 2901



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 109/386 (28%), Positives = 152/386 (39%), Gaps = 73/386 (18%)

Query: 56   FAMAISDSRKLITWGSTDDL------GQSYV----TSGKHG-----EIPEPFPLPT-EAS 99
            F+  IS  R +   G +  L      G+ Y     T+G+ G      +P P  LP     
Sbjct: 2667 FSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQY 2726

Query: 100  IVKAAA---GWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLT 156
            +VK  A   G  H +A+T  G+V++WG  E        G L  G     D      +   
Sbjct: 2727 VVKKVAVHSGGKHALALTLDGKVFSWGEGE-------DGKLGHGNRTTLDKPRLVEALRA 2779

Query: 157  EQVSPRSQVSRSSGGTSSGTDGR--GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCL 214
            +++   +  S  S   SS  +    G GE G                  GD      P L
Sbjct: 2780 KKIRDVACGSSHSAAISSQGELYTWGLGEYGRL--------------GHGDNTTQLKPKL 2825

Query: 215  VTLNPGVRIATVAAGGR--HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIE 272
            VT   G R+  VA G R   TLAL++ G V+ WG G  G+LG G                
Sbjct: 2826 VTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG--------------- 2870

Query: 273  SSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQC 332
             S G D    + R S           G  V  I CG + S  +T AG + T+G G Y + 
Sbjct: 2871 -SEGSDTPHEIERLS-----------GIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRL 2918

Query: 333  GQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAE 392
            G G       P  +  L G ++  VA G  H + ++  G VYA+G N  GQ G+G     
Sbjct: 2919 GHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVN 2978

Query: 393  TLPRLLDAPSLENVHSKSVSCGARHT 418
              P L+    L+ V    V+CG+ H+
Sbjct: 2979 KKPALVIG--LDAVFVNRVACGSSHS 3002



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 115/238 (48%), Gaps = 45/238 (18%)

Query: 230 GRHTLALSDIGQVWGWGYGGEGQLGLG-SRIRMVSSPHPIPCIESSYGKDRSAALSRGSV 288
           GRH LA+      + WG G + +LG G +  R V  P  I  +E                
Sbjct: 279 GRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAV--PTKIAALEQ--------------- 321

Query: 289 NSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS 348
                      + V+ + CG  +SA IT  G LLT+G G Y + G G++DD   P  V +
Sbjct: 322 -----------HCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVA 370

Query: 349 LLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENV 406
           L    +  VA  +G  H++ ++S+G V+A+G   +G+LG G       P L++  SL  V
Sbjct: 371 LSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVE--SLPRV 428

Query: 407 HSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC-VPRNVA 463
             + V  G++ +  ++ +G+++ WG  K   LG   +++R      +++GC VPR V+
Sbjct: 429 --QRVFAGSQFSVALSSEGQLYTWG--KATCLG-HQLVER------SVQGCSVPRLVS 475



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 87/348 (25%), Positives = 135/348 (38%), Gaps = 66/348 (18%)

Query: 24   LPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDD--LGQSYVT 81
            LP + P+L   VV+         +     G   A+A++   K+ +WG  +D  LG    T
Sbjct: 2716 LPHQLPVLHQYVVK---------KVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRT 2766

Query: 82   SGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGT 141
            +     + E         I   A G +H  A++  GE+YTWG  E       +G L  G 
Sbjct: 2767 TLDKPRLVEAL---RAKKIRDVACGSSHSAAISSQGELYTWGLGE-------YGRLGHGD 2816

Query: 142  GLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQT 197
               +   +  ++    +V   +  SR +   +   DG     G G+ G       L +  
Sbjct: 2817 NTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFG------KLGRGG 2870

Query: 198  AESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS 257
            +E S +  E        +    G+ +  +  G + +LAL+  G+VW WG G   +LG G 
Sbjct: 2871 SEGSDTPHE--------IERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGG 2922

Query: 258  RIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITD 317
              + V  P PI                         G R  G  V  +A G  H   +TD
Sbjct: 2923 D-QHVRKPQPI------------------------GGLR--GRRVIHVAVGALHCLAVTD 2955

Query: 318  AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTI 365
            AG +  +G   +GQ G G+T     P  V  L  + +  VA G  H+I
Sbjct: 2956 AGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSI 3003



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 63/136 (46%)

Query: 307 CGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC 366
           C GRH   I       ++G G   + G G T     P  +++L    ++ V  G  ++  
Sbjct: 277 CEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAA 336

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           I+  G++  +G   + +LG G     +LP L+ A S   V   ++  G  H+  +  +G 
Sbjct: 337 ITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGL 396

Query: 427 VFCWGWNKYGQLGLGD 442
           VF WG   YG+LG G+
Sbjct: 397 VFAWGDGDYGKLGNGN 412



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 92/221 (41%), Gaps = 33/221 (14%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           G+ +  + P LV       +  VA  +G  H+LAL+  G V+ WG G  G+LG G+    
Sbjct: 357 GNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGN---C 413

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
             S  PI  +ES         L R                V+ +  G + S  ++  G L
Sbjct: 414 NGSLQPI-LVES---------LPR----------------VQRVFAGSQFSVALSSEGQL 447

Query: 322 LTFGWG--LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN 379
            T+G    L  Q  + S      P  VSSL   +I  VA  + H + +SS G+V+ +G N
Sbjct: 448 YTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRN 507

Query: 380 QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
              Q+      +E L R     SL    +  ++C +  + V
Sbjct: 508 DSQQICPASVSSEPLLRTPILVSLPTFPASGIACTSAQSLV 548



 Score = 45.1 bits (105), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 1/73 (1%)

Query: 52  GGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHG-EIPEPFPLPTEASIVKAAAGWAHC 110
            G  F++A+S   +L TWG    LG   V     G  +P          IV  A   AHC
Sbjct: 433 AGSQFSVALSSEGQLYTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHC 492

Query: 111 VAVTEGGEVYTWG 123
           +A++  GEV+ WG
Sbjct: 493 LALSSSGEVFGWG 505



 Score = 43.1 bits (100), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 81/208 (38%), Gaps = 32/208 (15%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGE-----IPEPFPLPTEASIVKAA--A 105
           GC ++ AI+    L+TWG       +Y   G HG      +P      ++  +V  A  +
Sbjct: 330 GCSYSAAITCGGNLLTWGRG-----TYARLG-HGNSDDRSLPTLVVALSDHMVVDVALGS 383

Query: 106 GWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQV 165
           G AH +A+T  G V+ WG  +       +G L  G            S     V    +V
Sbjct: 384 GDAHSLALTSEGLVFAWGDGD-------YGKLGNGNC--------NGSLQPILVESLPRV 428

Query: 166 SRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIAT 225
            R   G+         G+  +  +   L  Q  E S  G     + P LV+     RI  
Sbjct: 429 QRVFAGSQFSVALSSEGQLYTWGKATCLGHQLVERSVQG----CSVPRLVSSLQHKRIVD 484

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQL 253
           VA    H LALS  G+V+GWG     Q+
Sbjct: 485 VAVSVAHCLALSSSGEVFGWGRNDSQQI 512


>gi|156378180|ref|XP_001631022.1| predicted protein [Nematostella vectensis]
 gi|156218054|gb|EDO38959.1| predicted protein [Nematostella vectensis]
          Length = 133

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 57/121 (47%), Positives = 75/121 (61%), Gaps = 1/121 (0%)

Query: 330 GQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG-G 388
           GQ G G TD E  P  +  L+GI I+ +AAG WH+  IS  GDVY +G N+ GQ+G G G
Sbjct: 13  GQLGHGLTDAETEPRRLEVLVGINIKCIAAGGWHSAVISDAGDVYGWGWNESGQVGIGDG 72

Query: 389 DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNI 448
            Q +  P  +  P+ +  +  SV+CGARHTA ++DD +V+ WGW  YGQLG GD   R  
Sbjct: 73  IQCQMDPTPICFPASDEPNVVSVACGARHTAAVSDDAQVWTWGWGWYGQLGHGDRRTRTT 132

Query: 449 P 449
           P
Sbjct: 133 P 133



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 61/124 (49%), Gaps = 24/124 (19%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G+ I  +AAGG H+  +SD G V+GWG+   GQ+G+G  I+    P PI C  +S   D 
Sbjct: 34  GINIKCIAAGGWHSAVISDAGDVYGWGWNESGQVGIGDGIQCQMDPTPI-CFPAS---DE 89

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDD 339
              +S                    +ACG RH+A ++D   + T+GWG YGQ G G    
Sbjct: 90  PNVVS--------------------VACGARHTAAVSDDAQVWTWGWGWYGQLGHGDRRT 129

Query: 340 ELSP 343
             +P
Sbjct: 130 RTTP 133



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 5/118 (4%)

Query: 10  MERVVFMWGYLPGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITW 69
           M  +++++ Y  G L            RL + VG   + +  GG   A+ ISD+  +  W
Sbjct: 1   MAALIYLFPYSRGQLGHGLTDAETEPRRLEVLVGINIKCIAAGGWHSAV-ISDAGDVYGW 59

Query: 70  GSTDDLGQSYVTSGKHGEI-PEP--FPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGW 124
           G  +  GQ  +  G   ++ P P  FP   E ++V  A G  H  AV++  +V+TWGW
Sbjct: 60  GWNES-GQVGIGDGIQCQMDPTPICFPASDEPNVVSVACGARHTAAVSDDAQVWTWGW 116


>gi|328701601|ref|XP_001942852.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Acyrthosiphon
            pisum]
          Length = 4257

 Score =  105 bits (262), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 56/173 (32%), Positives = 105/173 (60%), Gaps = 6/173 (3%)

Query: 305  IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL--- 361
            I CG   + V+T  G +L+ G G YG+ G G +D   +   +S+L G  I  V+  +   
Sbjct: 3431 IVCGQNCTFVLTSQGTVLSCGEGNYGRLGHGHSDSLPNLTMISALQGFVITQVSTSIGSD 3490

Query: 362  WHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
             H++ ++  G+V+++G   FG+LG G ++ +  P+L++  SL +V    V+CG +H+AV+
Sbjct: 3491 GHSLALTETGEVFSWGDGDFGKLGHGNNERQRKPKLIE--SLYDVVVIQVACGHKHSAVL 3548

Query: 422  ADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVP-RNVACGWWHTLLLA 473
            + DG+V+ +G  ++G+LGLG  I++  P+++  +G +  + +ACG  HT+ + 
Sbjct: 3549 SQDGEVYVFGSAEHGKLGLGGHINKKRPTKIVHKGFLNIKYIACGQNHTICIG 3601



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 67/230 (29%), Positives = 106/230 (46%), Gaps = 30/230 (13%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMV 262
           G+ +    P  + +N  ++  + + G   H+LALSD G+V+ WG G  G+LG G      
Sbjct: 408 GNSSNQPVPKRININCKIKQVSSSKGCDGHSLALSDTGEVYSWGDGDYGKLGHGD----- 462

Query: 263 SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL 322
            + H  P +                   +GP     G  ++ ++ G RHSA +T  G L 
Sbjct: 463 VATHKEPKL------------------IQGPFI---GKVIELVSAGYRHSAAVTSDGQLY 501

Query: 323 TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGD-VYAFGGNQF 381
           T+G G +G+ G G  +    P  V SL  + +  VA G  HT+  S DG+ V++FG    
Sbjct: 502 TWGEGDHGRLGHGDCNPRFIPTLVKSLSDMPVGYVACGSTHTLACSRDGNTVWSFGSGDN 561

Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWG 431
           G+LG G       P+ ++   L +   K V+ G   +  +   G+VF WG
Sbjct: 562 GKLGHGNTIRLYKPQKIEG--LRHYKIKKVAAGIHFSVALTCTGEVFTWG 609



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 62/210 (29%), Positives = 105/210 (50%), Gaps = 9/210 (4%)

Query: 268  IPCIESSYGK---DRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTF 324
            + C E +YG+     S +L   ++ S   GF V       I   G HS  +T+ G + ++
Sbjct: 3448 LSCGEGNYGRLGHGHSDSLPNLTMISALQGF-VITQVSTSIGSDG-HSLALTETGEVFSW 3505

Query: 325  GWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQL 384
            G G +G+ G G+ + +  P  + SL  + +  VA G  H+  +S DG+VY FG  + G+L
Sbjct: 3506 GDGDFGKLGHGNNERQRKPKLIESLYDVVVIQVACGHKHSAVLSQDGEVYVFGSAEHGKL 3565

Query: 385  GTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVI 444
            G GG   +  P  +      N+  K ++CG  HT  I ++  V+ +G  + G+LG+G   
Sbjct: 3566 GLGGHINKKRPTKIVHKGFLNI--KYIACGQNHTICIGEN-VVWAFGEGEGGKLGIGSKK 3622

Query: 445  DRNIPSQ-VTIEGCVPRNVACGWWHTLLLA 473
            D  +P + +T+ G   +   CG   T+ L+
Sbjct: 3623 DIYVPQEIITLNGKNIKKAYCGNGFTMFLS 3652



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 53/171 (30%), Positives = 87/171 (50%), Gaps = 3/171 (1%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGI-QIEGVAAG 360
           V+ +  G   + +I   G +   G   YG+ G G++ ++  P  ++    I Q+      
Sbjct: 375 VQQVEAGQYCTFIIDTKGCVSACGKNSYGRLGLGNSSNQPVPKRININCKIKQVSSSKGC 434

Query: 361 LWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
             H++ +S  G+VY++G   +G+LG G       P+L+  P +  V  + VS G RH+A 
Sbjct: 435 DGHSLALSDTGEVYSWGDGDYGKLGHGDVATHKEPKLIQGPFIGKV-IELVSAGYRHSAA 493

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRN-VACGWWHTL 470
           +  DG+++ WG   +G+LG GD   R IP+ V     +P   VACG  HTL
Sbjct: 494 VTSDGQLYTWGEGDHGRLGHGDCNPRFIPTLVKSLSDMPVGYVACGSTHTL 544



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 72/257 (28%), Positives = 120/257 (46%), Gaps = 41/257 (15%)

Query: 222  RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
            +++T      H+LAL++ G+V+ WG G  G+LG G+  R    P     IES Y      
Sbjct: 3482 QVSTSIGSDGHSLALTETGEVFSWGDGDFGKLGHGNNERQ-RKPK---LIESLYDV---- 3533

Query: 282  ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL 341
                                V  +ACG +HSAV++  G +  FG   +G+ G G   ++ 
Sbjct: 3534 -------------------VVIQVACGHKHSAVLSQDGEVYVFGSAEHGKLGLGGHINKK 3574

Query: 342  SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
             P  +     + I+ +A G  HTICI  +  V+AFG  + G+LG G  +   +P+ +   
Sbjct: 3575 RPTKIVHKGFLNIKYIACGQNHTICIGEN-VVWAFGEGEGGKLGIGSKKDIYVPQEIITL 3633

Query: 402  SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVID-----RNIPSQV-TIE 455
            + +N+  K   CG   T  +++DG+++  G +      L D  D     + IP ++   +
Sbjct: 3634 NGKNI--KKAYCGNGFTMFLSEDGELYSCGSDN-----LQDATDVLYTEKLIPEKIFEFQ 3686

Query: 456  GCVPRNVACGWWHTLLL 472
            G +  +VA G  H L+L
Sbjct: 3687 GQIVTDVATGPDHVLVL 3703



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 106/413 (25%), Positives = 166/413 (40%), Gaps = 64/413 (15%)

Query: 14  VFMWGYLPGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTD 73
           VFMWG                + RL  ++    +   G  C F   I D++  ++    +
Sbjct: 344 VFMWGSNSSNQHAEGATEVTDIPRLVRSLSDVQQVEAGQYCTF---IIDTKGCVSACGKN 400

Query: 74  DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGW-AHCVAVTEGGEVYTWGWKECVPSGR 132
             G+  + +  +  +P+   +  +   V ++ G   H +A+++ GEVY+WG  +    G 
Sbjct: 401 SYGRLGLGNSSNQPVPKRININCKIKQVSSSKGCDGHSLALSDTGEVYSWGDGDYGKLGH 460

Query: 133 VFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKR 188
             GD++T     K+    Q  F+ + +   S   R S   +S  DG+    G G+ G   
Sbjct: 461 --GDVAT----HKEPKLIQGPFIGKVIELVSAGYRHSAAVTS--DGQLYTWGEGDHG--- 509

Query: 189 RRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS-DIGQVWGWGY 247
            R+            GD N    P LV     + +  VA G  HTLA S D   VW +G 
Sbjct: 510 -RLG----------HGDCNPRFIPTLVKSLSDMPVGYVACGSTHTLACSRDGNTVWSFGS 558

Query: 248 GGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNY-VKGIA 306
           G  G+LG G+ IR+   P  I                         G R   +Y +K +A
Sbjct: 559 GDNGKLGHGNTIRLY-KPQKI------------------------EGLR---HYKIKKVA 590

Query: 307 CGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL-SPNCVSSLLGIQIEGVAAGLWHTI 365
            G   S  +T  G + T  WG     G GS++  L SP  V  L+   I  ++ G  H +
Sbjct: 591 AGIHFSVALTCTGEVFT--WGQGSNLGCGSSEITLFSPAVVEDLMQQMIIDISVGDSHCL 648

Query: 366 CISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
            ++ +  VYA+G N  GQ G  G     + R     +LE      +S G  H+
Sbjct: 649 ALTRNCAVYAWGSNGKGQCGQ-GHSTSPVSRPSKVINLEGKQINQISAGTSHS 700



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 73/264 (27%), Positives = 116/264 (43%), Gaps = 40/264 (15%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G  I  V+AG RH+ A++  GQ++ WG G  G+LG G       +P  IP +  S     
Sbjct: 478 GKVIELVSAGYRHSAAVTSDGQLYTWGEGDHGRLGHGD-----CNPRFIPTLVKSLSD-- 530

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHS-AVITDAGALLTFGWGLYGQCGQGSTD 338
                            +P  YV   ACG  H+ A   D   + +FG G  G+ G G+T 
Sbjct: 531 -----------------MPVGYV---ACGSTHTLACSRDGNTVWSFGSGDNGKLGHGNTI 570

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
               P  +  L   +I+ VAAG+  ++ ++  G+V+ +G  Q   LG G  +      L 
Sbjct: 571 RLYKPQKIEGLRHYKIKKVAAGIHFSVALTCTGEVFTWG--QGSNLGCGSSEIT----LF 624

Query: 399 DAPSLENVHSK---SVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR-NIPSQV-T 453
               +E++  +    +S G  H   +  +  V+ WG N  GQ G G      + PS+V  
Sbjct: 625 SPAVVEDLMQQMIIDISVGDSHCLALTRNCAVYAWGSNGKGQCGQGHSTSPVSRPSKVIN 684

Query: 454 IEGCVPRNVACGWWHTLL-LAVPP 476
           +EG     ++ G  H++    +PP
Sbjct: 685 LEGKQINQISAGTSHSVAWTTLPP 708



 Score = 44.3 bits (103), Expect = 0.14,   Method: Composition-based stats.
 Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 4/83 (4%)

Query: 372 DVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWG 431
           +V+ +G N   Q   G  +   +PRL+   SL +V  + V  G   T +I   G V   G
Sbjct: 343 EVFMWGSNSSNQHAEGATEVTDIPRLVR--SLSDV--QQVEAGQYCTFIIDTKGCVSACG 398

Query: 432 WNKYGQLGLGDVIDRNIPSQVTI 454
            N YG+LGLG+  ++ +P ++ I
Sbjct: 399 KNSYGRLGLGNSSNQPVPKRINI 421


>gi|426344974|ref|XP_004039178.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Gorilla
           gorilla gorilla]
          Length = 982

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 80/254 (31%), Positives = 119/254 (46%), Gaps = 36/254 (14%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  V+ G  H+LA+   G+V+ WG G EGQLG+G    +  +P  I  +           
Sbjct: 77  VDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLN---------- 126

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDEL 341
                           G  +  ++CG  HS  ++    + ++G   +GQ G G     + 
Sbjct: 127 ----------------GIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQA 170

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  V SL GI +  VAAG  H+  +S  G  + +G N  GQL   G     +P   + P
Sbjct: 171 SPQRVRSLEGIPLAQVAAGGTHSFALSLCGTSFGWGSNSAGQLALSG---RNVPAQSNKP 227

Query: 402 ----SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEG 456
               +L+N+    +SCG  HTAV+  DGKVF +G N  GQLG     ++  P  V  I+G
Sbjct: 228 LSIGALKNLGVVYISCGDEHTAVLTQDGKVFTFGDNCSGQLGYSPTPEKRGPQLVERIDG 287

Query: 457 CVPRNVACGWWHTL 470
            V + + CG +HTL
Sbjct: 288 LVSQ-IDCGSYHTL 300



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 58/185 (31%), Positives = 93/185 (50%), Gaps = 15/185 (8%)

Query: 298 PGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ-GSTDDELSPNCVSSLLGIQIEG 356
           PG  +   A G RHS ++     +L+ G    GQ G+ G+   EL P  + +L  + ++ 
Sbjct: 21  PGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGEL-PEPIQALETLIVDL 79

Query: 357 VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL-PRLLDAPSLENVHSKSVSCGA 415
           V+ G  H++ +   G V+A+G    GQLG G  +  +  P+ +   +L  +    VSCG 
Sbjct: 80  VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIT--TLNGIKIIQVSCGH 137

Query: 416 RHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV------TIEGCVPRNVACGWWHT 469
            H+  ++ D +VF WG N +GQLGLG    +  PSQ       ++EG     VA G  H+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLG----KEFPSQASPQRVRSLEGIPLAQVAAGGTHS 193

Query: 470 LLLAV 474
             L++
Sbjct: 194 FALSL 198



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 91/203 (44%), Gaps = 33/203 (16%)

Query: 206 ENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSP 265
           + +S  P  +T   G++I  V+ G  H+LALS   QV+ WG    GQLGLG      +SP
Sbjct: 113 KEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASP 172

Query: 266 HP------IPCIESSYGKDRSAALSR-------GSVNSEGP----GFRVPGNYVK----- 303
                   IP  + + G   S ALS        GS NS G     G  VP    K     
Sbjct: 173 QRVRSLEGIPLAQVAAGGTHSFALSLCGTSFGWGS-NSAGQLALSGRNVPAQSNKPLSIG 231

Query: 304 --------GIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
                    I+CG  H+AV+T  G + TFG    GQ G   T ++  P  V  + G+ + 
Sbjct: 232 ALKNLGVVYISCGDEHTAVLTQDGKVFTFGDNCSGQLGYSPTPEKRGPQLVERIDGL-VS 290

Query: 356 GVAAGLWHTIC-ISSDGDVYAFG 377
            +  G +HT+  + + G V +FG
Sbjct: 291 QIDCGSYHTLAYVHTTGQVVSFG 313


>gi|195336543|ref|XP_002034895.1| GM14399 [Drosophila sechellia]
 gi|194127988|gb|EDW50031.1| GM14399 [Drosophila sechellia]
          Length = 1058

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 125/283 (44%), Gaps = 30/283 (10%)

Query: 219 PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLG---SRIRMVSSPHPIPCIESSY 275
           P   +  VA G RHTL L+  G+V+  G     QLG      R +++        I+ S 
Sbjct: 38  PDTAVQQVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTKRPQLIPELQDYVIIQISC 97

Query: 276 GKDRSAALSR-GSVNS-------------EGPGFRVP-------GNYVKGIACGGRHSAV 314
           G   S ALS  G V S             E    ++P          V  IACG  HS  
Sbjct: 98  GSRHSLALSDWGQVLSWGDNDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLA 157

Query: 315 ITDAGALLTFGWGLYGQCGQGSTDDELSPNC---VSSLLGIQIEGVAAGLWHTICISSDG 371
           +T  G L ++G  +YGQ G  S +D    N    +++LLGI +  +A G  H+  IS  G
Sbjct: 158 LTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSG 217

Query: 372 DVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWG 431
            V+ +G N  GQLG   +     P  L   +L  +  + V+CG   +  + ++G VF  G
Sbjct: 218 AVFGWGRNNCGQLGLNDETNRAYPTQLK--TLRTLGVRFVACGDEFSVFLTNEGGVFTCG 275

Query: 432 WNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLA 473
              YGQLG G   +  +P  V  + G     VACG  HTL L 
Sbjct: 276 AGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALV 318



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 123/265 (46%), Gaps = 39/265 (14%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI------PCIESSYG 276
           I  ++ G RH+LALSD GQV  WG    GQLG  +   +V  P  +        ++ + G
Sbjct: 92  IIQISCGSRHSLALSDWGQVLSWGDNDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACG 151

Query: 277 KDRSAALS------------RGSVNSEGPGFRVPGNY-----------VKGIACGGRHSA 313
            + S AL+             G +    P      NY           +  IACGG HS 
Sbjct: 152 NNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSF 211

Query: 314 VITDAGALLTFGWGLYGQCGQGSTDDELS---PNCVSSLLGIQIEGVAAGLWHTICISSD 370
           +I+ +GA+  FGWG    CGQ   +DE +   P  + +L  + +  VA G   ++ ++++
Sbjct: 212 LISKSGAV--FGWG-RNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNE 268

Query: 371 GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFC 429
           G V+  G   +GQLG G    E LPR++    L       V+CG RHT A++   GKV+ 
Sbjct: 269 GGVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLALVPSRGKVYA 326

Query: 430 WGWNKYGQLGLGDVIDRNIPSQVTI 454
           +G    GQLG        +P QV I
Sbjct: 327 FGLGSSGQLGTRSTKSLMLP-QVVI 350



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 103/375 (27%), Positives = 163/375 (43%), Gaps = 53/375 (14%)

Query: 30  ILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGE 87
           IL+P   ++P T  +A + V  G     + ++ + K+   GS D   LG    T      
Sbjct: 28  ILTPR--QIPWTPDTAVQQVACGH-RHTLFLTATGKVYACGSNDYSQLGHDLPTKR---- 80

Query: 88  IPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDV 147
            P+  P   +  I++ + G  H +A+++ G+V +WG  +C       G L  G   +K++
Sbjct: 81  -PQLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDNDC-------GQL--GHATEKEI 130

Query: 148 FERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDEN 207
              Q   +  Q+  ++ V  + G   S       GE  S    I         +S  D  
Sbjct: 131 V--QLPKVVRQLVSKTVVQIACGNNHS-LALTSCGELYSWGSNIY---GQLGVNSPNDLT 184

Query: 208 LSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHP 267
              +P  +T   G+ +A +A GG H+  +S  G V+GWG    GQLGL            
Sbjct: 185 HCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDE--------- 235

Query: 268 IPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWG 327
                     +R+      ++ + G         V+ +ACG   S  +T+ G + T G G
Sbjct: 236 ---------TNRAYPTQLKTLRTLG---------VRFVACGDEFSVFLTNEGGVFTCGAG 277

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFGGNQFGQLGT 386
            YGQ G G + +E+ P  V  L+G  I  VA G  HT+  + S G VYAFG    GQLGT
Sbjct: 278 AYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGKVYAFGLGSSGQLGT 337

Query: 387 GGDQAETLPRLLDAP 401
              ++  LP+++  P
Sbjct: 338 RSTKSLMLPQVVIGP 352



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 80/155 (51%), Gaps = 22/155 (14%)

Query: 329 YGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
           +GQ G G  +DE  L+P  +       ++ VA G  HT+ +++ G VYA G N + QLG 
Sbjct: 15  HGQLGLGGIEDEQILTPRQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSNDYSQLG- 73

Query: 387 GGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG------- 439
             D     P+L+  P L++     +SCG+RH+  ++D G+V  WG N  GQLG       
Sbjct: 74  -HDLPTKRPQLI--PELQDYVIIQISCGSRHSLALSDWGQVLSWGDNDCGQLGHATEKEI 130

Query: 440 --LGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
             L  V+ R + S+  ++      +ACG  H+L L
Sbjct: 131 VQLPKVV-RQLVSKTVVQ------IACGNNHSLAL 158



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 82/330 (24%), Positives = 129/330 (39%), Gaps = 59/330 (17%)

Query: 20  LPGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSY 79
           LP   PQ  P L   V+ + ++ GS            ++A+SD  ++++WG  D     +
Sbjct: 76  LPTKRPQLIPELQDYVI-IQISCGSR----------HSLALSDWGQVLSWGDNDCGQLGH 124

Query: 80  VTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLST 139
            T  +  ++P+        ++V+ A G  H +A+T  GE+Y+WG         ++G L  
Sbjct: 125 ATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWG-------SNIYGQLGV 177

Query: 140 GTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAE 199
            +  D           T    P + +  + GG  S    +     G  R           
Sbjct: 178 NSPNDLTHCNYPLRLTTLLGIPLAAI--ACGGNHSFLISKSGAVFGWGRNNCG------- 228

Query: 200 SSSSGDENLSAFPC-LVTLNP-GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS 257
                DE   A+P  L TL   GVR   VA G   ++ L++ G V+  G G  GQLG G 
Sbjct: 229 QLGLNDETNRAYPTQLKTLRTLGVRF--VACGDEFSVFLTNEGGVFTCGAGAYGQLGHG- 285

Query: 258 RIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHS-AVIT 316
                SS   +P +                         + G+ +  +ACG RH+ A++ 
Sbjct: 286 ----FSSNEMLPRM----------------------VMELMGSTITQVACGNRHTLALVP 319

Query: 317 DAGALLTFGWGLYGQCGQGSTDDELSPNCV 346
             G +  FG G  GQ G  ST   + P  V
Sbjct: 320 SRGKVYAFGLGSSGQLGTRSTKSLMLPQVV 349



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 1/107 (0%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           ++S  ++Y +G    GQLG GG + E +      P   +   + V+CG RHT  +   GK
Sbjct: 1   MASGKELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVACGHRHTLFLTATGK 60

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           V+  G N Y QLG  D+  +       ++  V   ++CG  H+L L+
Sbjct: 61  VYACGSNDYSQLG-HDLPTKRPQLIPELQDYVIIQISCGSRHSLALS 106


>gi|148234239|ref|NP_001080313.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Xenopus laevis]
 gi|28278605|gb|AAH44119.1| Chc1l-prov protein [Xenopus laevis]
          Length = 526

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 78/254 (30%), Positives = 125/254 (49%), Gaps = 29/254 (11%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++ A V   G   L ++   +V+  G    G LG G    ++  P  I  +    GK R 
Sbjct: 21  IQQACVFGAGNEVLYITKNDEVFVMGTNSSGCLGTGDAQSIIE-PRRIDMLS---GK-RI 75

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
            +LS GS                     G H  ++T  G + ++G   Y Q G GST+  
Sbjct: 76  VSLSYGS---------------------GPHVVIVTSDGEVYSWGHNAYSQLGNGSTNQA 114

Query: 341 LSPNCVSS-LLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLD 399
           LSP  VS+ L+  +   VA G  H++ ++ DG+VYA+G N  GQ+G+G    + +PR + 
Sbjct: 115 LSPCQVSTNLINKKAHSVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVT 174

Query: 400 APSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCV 458
           +  L+N     ++CG   +  + D+G+V+ WG+N  GQLGLG   ++  P ++  ++G  
Sbjct: 175 S-CLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIR 233

Query: 459 PRNVACGWWHTLLL 472
              V CG+ HTL L
Sbjct: 234 VEQVVCGYAHTLAL 247



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 120/233 (51%), Gaps = 34/233 (14%)

Query: 203 SGDENLSAFPCLVTLNPGVRIA-TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +G  N +  PC V+ N   + A +VA G  H++ L+  G+V+ WGY   GQ+G GS    
Sbjct: 108 NGSTNQALSPCQVSTNLINKKAHSVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGS---- 163

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
            ++  PIP   +S  ++++                     V GIACG   S  + D G +
Sbjct: 164 -TANQPIPRKVTSCLQNKT---------------------VIGIACGQMSSMAVVDNGEV 201

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             +G+   GQ G GS+ ++ +P  +++L GI++E V  G  HT+ ++ +G +YA+G N +
Sbjct: 202 YAWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSY 261

Query: 382 GQLGTGGDQAETLP--RLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           GQLGTG    ++ P   ++D   +  +     +C + HT A  +  G+V+ WG
Sbjct: 262 GQLGTGNKSNQSYPVQVIVDKERIVEI----AACHSSHTSAAKSQSGQVYMWG 310



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 81/195 (41%), Gaps = 36/195 (18%)

Query: 103 AAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS-- 160
            A G  H + +T  GEVY WG+          G + +G+  ++ +  + +S L  +    
Sbjct: 132 VACGSHHSMVLTCDGEVYAWGYNNS-------GQVGSGSTANQPIPRKVTSCLQNKTVIG 184

Query: 161 ----PRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVT 216
                 S ++    G        G+G+ G                SSG++     PC + 
Sbjct: 185 IACGQMSSMAVVDNGEVYAWGYNGNGQLG--------------LGSSGNQ---PTPCRIA 227

Query: 217 LNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR------IRMVSSPHPIPC 270
              G+R+  V  G  HTLAL+D G ++ WG    GQLG G++      ++++     I  
Sbjct: 228 ALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGNKSNQSYPVQVIVDKERIVE 287

Query: 271 IESSYGKDRSAALSR 285
           I + +    SAA S+
Sbjct: 288 IAACHSSHTSAAKSQ 302


>gi|344281808|ref|XP_003412669.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Loxodonta
           africana]
          Length = 551

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 64/176 (36%), Positives = 102/176 (57%), Gaps = 7/176 (3%)

Query: 303 KGIAC----GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS-LLGIQIEGV 357
           K IAC     G H  + T  G + T+G   Y Q G G+T+  L P  +S+ L   Q+  V
Sbjct: 98  KKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCYISTNLSNKQVIEV 157

Query: 358 AAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARH 417
           A G +H++ ++SDG+V+A+G N  GQ+G+G    + +PR +    L+N    +++CG   
Sbjct: 158 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTG-CLQNKAVVNIACGQMC 216

Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
           +  + D G+V+ WG+N  GQLGLG   ++  P +V  ++G   + VACG+ HTL+L
Sbjct: 217 SMAVVDAGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIHVQRVACGYAHTLVL 272



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 120/238 (50%), Gaps = 30/238 (12%)

Query: 220 GVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
           G +IA ++ G G H +  +  G+V+ WG+    QLG G+     ++   +PC  S+    
Sbjct: 97  GKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT-----TNHGLVPCYIST---- 147

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
                             +    V  +ACG  HS V+T  G +  +G+   GQ G GST 
Sbjct: 148 -----------------NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTA 190

Query: 339 DELSPNCVSSLLGIQ-IEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
           ++  P  V+  L  + +  +A G   ++ +   G+VY +G N  GQLG G    +  P  
Sbjct: 191 NQPIPRRVTGCLQNKAVVNIACGQMCSMAVVDAGEVYVWGYNGNGQLGLGSSGNQPTPCR 250

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
           + A  L+ +H + V+CG  HT V+ D+G+V+ WG N YGQLG G+  +++ P+ +++E
Sbjct: 251 VAA--LQGIHVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPISVE 306



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 112/231 (48%), Gaps = 30/231 (12%)

Query: 203 SGDENLSAFPCLVTLN-PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +G  N    PC ++ N    ++  VA G  H+L L+  G+V+ WGY   GQ+G GS    
Sbjct: 133 NGTTNHGLVPCYISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---- 188

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
            ++  PIP       +  +  L   +V                IACG   S  + DAG +
Sbjct: 189 -TANQPIP-------RRVTGCLQNKAV--------------VNIACGQMCSMAVVDAGEV 226

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             +G+   GQ G GS+ ++ +P  V++L GI ++ VA G  HT+ ++ +G VYA+G N +
Sbjct: 227 YVWGYNGNGQLGLGSSGNQPTPCRVAALQGIHVQRVACGYAHTLVLTDEGQVYAWGANSY 286

Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           GQLGTG    ++ P  +       +  +  +C + HT A     G V+ WG
Sbjct: 287 GQLGTGNKSNQSYPTPISVEKDRII--EIAACHSTHTSAAKTQGGNVYMWG 335



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 15/111 (13%)

Query: 370 DGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFC 429
           + +++  G N  G LG G  Q+   PR LD+ S + +   S   G  H  +   +G+VF 
Sbjct: 64  NNEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGP-HIVLATTEGEVFT 122

Query: 430 WGWNKYGQLGLGDV--------IDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           WG N Y QLG G          I  N+ ++  IE      VACG +H+L+L
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCYISTNLSNKQVIE------VACGSYHSLVL 167



 Score = 39.3 bits (90), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 56/133 (42%), Gaps = 17/133 (12%)

Query: 14  VFMWGYL-PGALPQRSPILSPLVVRLP--LTVGSAWRDVCGGGCGFAMAISDSRKLITWG 70
           VF WGY   G +   S    P+  R+   L   +     CG  C  +MA+ D+ ++  WG
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKAVVNIACGQMC--SMAVVDAGEVYVWG 230

Query: 71  STDDLGQSYVTSGKHGEIPEPFPLPTEASI--VKAAAGWAHCVAVTEGGEVYTWGWKECV 128
                G   +  G  G  P P  +     I   + A G+AH + +T+ G+VY WG     
Sbjct: 231 YN---GNGQLGLGSSGNQPTPCRVAALQGIHVQRVACGYAHTLVLTDEGQVYAWG----- 282

Query: 129 PSGRVFGDLSTGT 141
                +G L TG 
Sbjct: 283 --ANSYGQLGTGN 293


>gi|196005109|ref|XP_002112421.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
 gi|190584462|gb|EDV24531.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
          Length = 4625

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 84/270 (31%), Positives = 129/270 (47%), Gaps = 42/270 (15%)

Query: 212 PCLVTLNPGVRIATVAAG--GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP 269
           P L+     ++I  +AA   G H LALS  G V+ WG G  G+LG G  IR         
Sbjct: 502 PVLLDSLIDIKIKKIAANVEGEHYLALSSDGCVYSWGSGDGGRLGHGD-IR--------- 551

Query: 270 CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
                    R   L +  VN +          +  IACG  +SA +T  G L T+G G Y
Sbjct: 552 ---------REPELVKELVNKK----------ITQIACGSTYSAAVTSNGELYTWGRGSY 592

Query: 330 GQCGQGSTDDELSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTG 387
           G+ G G+++D L P  V+ L G  +  VA  +G  HT+ I  DG V+++G   +G+LG G
Sbjct: 593 GRLGHGNSEDRLLPTLVAGLSGSHVVDVACGSGDAHTLAIDKDGIVWSWGDGDYGKLGRG 652

Query: 388 GDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
           G     +P++++     N +  +V CG++ +  +  DG V+ WG +   +LG G +    
Sbjct: 653 GSDCCKVPKVVETLKHHNKYIVNVLCGSQFSVALGKDGTVWTWGKSDGYRLGHGTLDHVR 712

Query: 448 IPSQVTIEGCVPRNVACGWWHTLLLAVPPT 477
            P  V  EG +        +H + +AV P+
Sbjct: 713 YPKMV--EGLIN-------YHIVDIAVGPS 733



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 86/296 (29%), Positives = 141/296 (47%), Gaps = 33/296 (11%)

Query: 206  ENLSAFPCLVTLNPG-VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSS 264
            EN+S    L TLN   V+  TV  GGRH+L ++  G+V+ WG G +G+LG G     +S 
Sbjct: 2940 ENISIPVQLDTLNMHFVKKVTVHPGGRHSLCITREGKVFSWGEGIDGKLGHGDVTSRLS- 2998

Query: 265  PHPIPCIESSY------GKDRSAALS-RGSVNSEGPG------------FRVPGNY---- 301
            P  I  +ES        G   SAA++  G + + G G              +P       
Sbjct: 2999 PTLIEALESKLIVEIACGSSHSAAVTADGELYTWGLGDYGRLGHGDSKTLHIPKQVKALQ 3058

Query: 302  ---VKGIACGGR--HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG 356
               V  IACG R   +  +TD   + ++G G +G+ G+G ++    P  + +L G  +  
Sbjct: 3059 DYKVIDIACGSRDAQTLALTDNNCVWSWGDGDFGKLGRGGSEGCNIPQKIDALCGRDVCR 3118

Query: 357  VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR 416
            +A G   ++ +S+ G V+ +G   + +LG G D     P+L++ P L+      ++ GA 
Sbjct: 3119 IACGAQFSLALSTTGKVWTWGKGDYYRLGHGNDSHYRSPQLIEGP-LKKKRITEIAVGAL 3177

Query: 417  HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTL 470
            H   + D G+V+ WG N +GQ G G+      P      ++G    ++ACG  H++
Sbjct: 3178 HCLAVTDTGEVYSWGDNDHGQQGNGNTTVNKRPQICLGELDGVKISHIACGSSHSI 3233



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 77/244 (31%), Positives = 114/244 (46%), Gaps = 45/244 (18%)

Query: 225  TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
            +V +GGRH + L+   +V+ WG G +G+LG G ++   SS  P   IE+  GK       
Sbjct: 3861 SVHSGGRHAMVLTSNFEVFSWGDGEDGKLGHGDKL---SSETPRK-IEALLGKQ------ 3910

Query: 285  RGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN 344
                             +  I+CG  HSA IT  G L T+G G YG+ G G  DD L P 
Sbjct: 3911 -----------------IVHISCGSSHSAAITSKGELYTWGKGRYGRLGHGDGDDCLKPK 3953

Query: 345  CVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPS 402
             + +L   ++  VA  +G   T+ I+ D  V+++G   +G+LG GG      P  L   S
Sbjct: 3954 LLEALKSYKVIDVACGSGDAQTLAITDDDCVWSWGDGDYGKLGRGGSDGCKKP--LRIES 4011

Query: 403  LENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG--DVIDRNIPSQVTIEGCVPR 460
            L  +    V CG++ +  +  +G ++ WG   Y +LG G  D + R            PR
Sbjct: 4012 LIGMAVCKVECGSQFSVALTKNGDLYTWGKGDYYRLGHGTNDHVRR------------PR 4059

Query: 461  NVAC 464
             VAC
Sbjct: 4060 KVAC 4063



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 70/259 (27%), Positives = 122/259 (47%), Gaps = 34/259 (13%)

Query: 220  GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
             +R  ++A G +    ++  G+V+  G G  G+LGLG+    +S P  +  +   + K  
Sbjct: 2901 ALRPVSIAGGSKTVFIVTYDGKVYVSGEGANGRLGLGN-TENISIPVQLDTLNMHFVKKV 2959

Query: 280  SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDD 339
            +                        +  GGRHS  IT  G + ++G G+ G+ G G    
Sbjct: 2960 T------------------------VHPGGRHSLCITREGKVFSWGEGIDGKLGHGDVTS 2995

Query: 340  ELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLD 399
             LSP  + +L    I  +A G  H+  +++DG++Y +G   +G+LG G  +   +P+ + 
Sbjct: 2996 RLSPTLIEALESKLIVEIACGSSHSAAVTADGELYTWGLGDYGRLGHGDSKTLHIPKQVK 3055

Query: 400  APSLENVHSKSVSCGAR--HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC 457
            A  L++     ++CG+R   T  + D+  V+ WG   +G+LG G     NIP +  I+  
Sbjct: 3056 A--LQDYKVIDIACGSRDAQTLALTDNNCVWSWGDGDFGKLGRGGSEGCNIPQK--IDAL 3111

Query: 458  VPRNV---ACGWWHTLLLA 473
              R+V   ACG   +L L+
Sbjct: 3112 CGRDVCRIACGAQFSLALS 3130



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 118/279 (42%), Gaps = 45/279 (16%)

Query: 204  GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS-----R 258
            GD+  S  P  +    G +I  ++ G  H+ A++  G+++ WG G  G+LG G      +
Sbjct: 3892 GDKLSSETPRKIEALLGKQIVHISCGSSHSAAITSKGELYTWGKGRYGRLGHGDGDDCLK 3951

Query: 259  IRMVSSPHPIPCIES-------------------SYGKDRSAALSRGSVNSEGPGFRVP- 298
             +++ +      I+                    S+G      L RG  +      R+  
Sbjct: 3952 PKLLEALKSYKVIDVACGSGDAQTLAITDDDCVWSWGDGDYGKLGRGGSDGCKKPLRIES 4011

Query: 299  --GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG 356
              G  V  + CG + S  +T  G L T+G G Y + G G+ D    P  V+ L G QI  
Sbjct: 4012 LIGMAVCKVECGSQFSVALTKNGDLYTWGKGDYYRLGHGTNDHVRRPRKVACLQGKQIVT 4071

Query: 357  VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR 416
            VAAG  H +  +  G+V+ +G N  GQLG G       P L+    LENV    V CG+ 
Sbjct: 4072 VAAGSLHCVACTDAGEVFTWGDNDEGQLGNGTLNPIPEPTLVTV--LENVKLNRVGCGSA 4129

Query: 417  HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
            H+           + W+    + +G      +P+Q+ +E
Sbjct: 4130 HS-----------FAWSTEAPIDIG-----YMPNQIPVE 4152



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 87/329 (26%), Positives = 129/329 (39%), Gaps = 66/329 (20%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V    G  H + +T  G+V++WG         + G L  G     DV  R S  L E + 
Sbjct: 2959 VTVHPGGRHSLCITREGKVFSWG-------EGIDGKLGHG-----DVTSRLSPTLIEALE 3006

Query: 161  PRSQVSRSSGGTSSG---TDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPC 213
             +  V  + G + S     DG     G G+ G                  GD      P 
Sbjct: 3007 SKLIVEIACGSSHSAAVTADGELYTWGLGDYGRL--------------GHGDSKTLHIPK 3052

Query: 214  LVTLNPGVRIATVAAGGR--HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP-C 270
             V      ++  +A G R   TLAL+D   VW WG G  G+LG G      S    IP  
Sbjct: 3053 QVKALQDYKVIDIACGSRDAQTLALTDNNCVWSWGDGDFGKLGRGG-----SEGCNIPQK 3107

Query: 271  IESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
            I++  G+D                       V  IACG + S  ++  G + T+G G Y 
Sbjct: 3108 IDALCGRD-----------------------VCRIACGAQFSLALSTTGKVWTWGKGDYY 3144

Query: 331  QCGQGSTDDELSPNCVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD 389
            + G G+     SP  +   L   +I  +A G  H + ++  G+VY++G N  GQ G G  
Sbjct: 3145 RLGHGNDSHYRSPQLIEGPLKKKRITEIAVGALHCLAVTDTGEVYSWGDNDHGQQGNGNT 3204

Query: 390  QAETLPRLLDAPSLENVHSKSVSCGARHT 418
                 P++     L+ V    ++CG+ H+
Sbjct: 3205 TVNKRPQIC-LGELDGVKISHIACGSSHS 3232



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 72/150 (48%), Gaps = 3/150 (2%)

Query: 323  TFGWGL--YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
             F WGL   GQ G        SP  + ++  ++   +A G      ++ DG VY  G   
Sbjct: 2871 VFVWGLNDKGQLGGCKGSKVKSPTEMKNIAALRPVSIAGGSKTVFIVTYDGKVYVSGEGA 2930

Query: 381  FGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL 440
             G+LG G  +  ++P  LD  ++  V   +V  G RH+  I  +GKVF WG    G+LG 
Sbjct: 2931 NGRLGLGNTENISIPVQLDTLNMHFVKKVTVHPGGRHSLCITREGKVFSWGEGIDGKLGH 2990

Query: 441  GDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            GDV  R  P+ +  +E  +   +ACG  H+
Sbjct: 2991 GDVTSRLSPTLIEALESKLIVEIACGSSHS 3020



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 87/317 (27%), Positives = 130/317 (41%), Gaps = 59/317 (18%)

Query: 57   AMAISDSRKLITWGSTDD--LGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVT 114
            ++ I+   K+ +WG   D  LG   VTS     + E         IV+ A G +H  AVT
Sbjct: 2968 SLCITREGKVFSWGEGIDGKLGHGDVTSRLSPTLIEALE---SKLIVEIACGSSHSAAVT 3024

Query: 115  EGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSS 174
              GE+YTWG  +       +G L  G      + ++  +    +V   +  SR +  T +
Sbjct: 3025 ADGELYTWGLGD-------YGRLGHGDSKTLHIPKQVKALQDYKVIDIACGSRDA-QTLA 3076

Query: 175  GTDGR-----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAG 229
             TD       G G+ G   R              G E  +  P  +    G  +  +A G
Sbjct: 3077 LTDNNCVWSWGDGDFGKLGR-------------GGSEGCN-IPQKIDALCGRDVCRIACG 3122

Query: 230  GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVN 289
             + +LALS  G+VW WG G   +LG G+              +S Y   RS  L      
Sbjct: 3123 AQFSLALSTTGKVWTWGKGDYYRLGHGN--------------DSHY---RSPQL------ 3159

Query: 290  SEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN-CVSS 348
             EGP   +    +  IA G  H   +TD G + ++G   +GQ G G+T     P  C+  
Sbjct: 3160 IEGP---LKKKRITEIAVGALHCLAVTDTGEVYSWGDNDHGQQGNGNTTVNKRPQICLGE 3216

Query: 349  LLGIQIEGVAAGLWHTI 365
            L G++I  +A G  H+I
Sbjct: 3217 LDGVKISHIACGSSHSI 3233



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 83/360 (23%), Positives = 137/360 (38%), Gaps = 78/360 (21%)

Query: 30   ILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDD--LGQSYVTSGKHGE 87
            I++P+++  PL      +     G   AM ++ + ++ +WG  +D  LG     S    E
Sbjct: 3843 IVTPVIIE-PLQHLKIEKLSVHSGGRHAMVLTSNFEVFSWGDGEDGKLGHGDKLSS---E 3898

Query: 88   IPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTG---LD 144
             P          IV  + G +H  A+T  GE+YTWG       GR +G L  G G   L 
Sbjct: 3899 TPRKIEALLGKQIVHISCGSSHSAAITSKGELYTWG------KGR-YGRLGHGDGDDCLK 3951

Query: 145  KDVFERQSSFLTEQVSPRSQVSRSSGGTSS-----------GTDGRGSGEEGSKRRRISL 193
              + E   S+    V+  S  +++   T             G  GRG G +G K+     
Sbjct: 3952 PKLLEALKSYKVIDVACGSGDAQTLAITDDDCVWSWGDGDYGKLGRG-GSDGCKK----- 4005

Query: 194  AKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQL 253
                              P  +    G+ +  V  G + ++AL+  G ++ WG G   +L
Sbjct: 4006 ------------------PLRIESLIGMAVCKVECGSQFSVALTKNGDLYTWGKGDYYRL 4047

Query: 254  GLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSA 313
            G G+    V  P  + C++                          G  +  +A G  H  
Sbjct: 4048 GHGTN-DHVRRPRKVACLQ--------------------------GKQIVTVAAGSLHCV 4080

Query: 314  VITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDV 373
              TDAG + T+G    GQ G G+ +    P  V+ L  +++  V  G  H+   S++  +
Sbjct: 4081 ACTDAGEVFTWGDNDEGQLGNGTLNPIPEPTLVTVLENVKLNRVGCGSAHSFAWSTEAPI 4140



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 8/82 (9%)

Query: 47   RDVCGGGCG--FAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEAS-IV 101
            RDVC   CG  F++A+S + K+ TWG  D   LG     +  H   P+    P +   I 
Sbjct: 3114 RDVCRIACGAQFSLALSTTGKVWTWGKGDYYRLGHG---NDSHYRSPQLIEGPLKKKRIT 3170

Query: 102  KAAAGWAHCVAVTEGGEVYTWG 123
            + A G  HC+AVT+ GEVY+WG
Sbjct: 3171 EIAVGALHCLAVTDTGEVYSWG 3192



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 81/337 (24%), Positives = 131/337 (38%), Gaps = 63/337 (18%)

Query: 87  EIPEPFPLPTEASIVKAAAGWA--HCVAVTEGGEVYTWGWKECVPSGRV-FGDLSTGTGL 143
           E P       +  I K AA     H +A++  G VY+WG  +    GR+  GD+     L
Sbjct: 500 EAPVLLDSLIDIKIKKIAANVEGEHYLALSSDGCVYSWGSGD---GGRLGHGDIRREPEL 556

Query: 144 DKDVFERQSSFLTEQVSPRSQVSRSSGGTSSG---TDGRGS-GEEGSKRRRISLAKQTAE 199
            K++  ++ +    Q++  S  + S+  TS+G   T GRGS G  G              
Sbjct: 557 VKELVNKKIT----QIACGS--TYSAAVTSNGELYTWGRGSYGRLGH------------- 597

Query: 200 SSSSGDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGS 257
               G+      P LV    G  +  VA  +G  HTLA+   G VW WG G  G+LG G 
Sbjct: 598 ----GNSEDRLLPTLVAGLSGSHVVDVACGSGDAHTLAIDKDGIVWSWGDGDYGKLGRGG 653

Query: 258 RIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITD 317
                S    +P +  +                     +    Y+  + CG + S  +  
Sbjct: 654 -----SDCCKVPKVVET--------------------LKHHNKYIVNVLCGSQFSVALGK 688

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
            G + T+G     + G G+ D    P  V  L+   I  +A G  H + ++ +  ++ +G
Sbjct: 689 DGTVWTWGKSDGYRLGHGTLDHVRYPKMVEGLINYHIVDIAVGPSHCLALTDNCQIFTWG 748

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
            +   +     D     P  + A + E +    V+CG
Sbjct: 749 SD-VQKYALSSDNYNMEPTCISAINKEFI--AGVACG 782


>gi|52353612|gb|AAU44178.1| ptative chromosome condensation factor [Oryza sativa Japonica
           Group]
          Length = 917

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 121/258 (46%), Gaps = 41/258 (15%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G+ +A V+ G  HT  ++ +GQ++ +G G  G LG G+ +  +S P  +  +        
Sbjct: 183 GLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGN-LTSISCPKEVESLS------- 234

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITD-----------AGALLTFGWGL 328
                              G     +ACG  H+A I +           AG L T+G G 
Sbjct: 235 -------------------GLKTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGD 275

Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGG 388
             + G G  +  L P CV+SL+      VA G   T+C+++ G V + G + +GQLG   
Sbjct: 276 KHRLGHGDKESRLKPTCVASLIDYDFYRVACGHSLTVCLTTSGKVLSMGNSVYGQLGNPN 335

Query: 389 DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNI 448
                LP L++   +   H   V+CG+ H AV+    +VF WG    G+LG GD+ DR +
Sbjct: 336 SDGR-LPCLVE-DRIAGEHVLQVACGSYHVAVLTGRSEVFTWGKGANGRLGHGDIEDRKV 393

Query: 449 PSQV-TIEGCVPRNVACG 465
           P+QV  ++    R++ACG
Sbjct: 394 PTQVEALKDRAVRHIACG 411



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 58/171 (33%), Positives = 95/171 (55%), Gaps = 4/171 (2%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V  + CG RH+A++T  G + T+G    G+ G G+ +D + P  V SL    ++ VA G 
Sbjct: 79  VYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNVDFVACGE 138

Query: 362 WHTICISSDGDVYAFGG--NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
           +HT  +++ G++Y +G   +  G LG G D    +P+ +   +L+ +    VSCG  HTA
Sbjct: 139 FHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISG-ALDGLPVAYVSCGTWHTA 197

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
           +I   G++F +G   +G LG G++   + P +V ++ G     VACG WHT
Sbjct: 198 LITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESLSGLKTIAVACGVWHT 248



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 72/138 (52%), Gaps = 6/138 (4%)

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D L P  + S L + +  V  G+ H   ++ +GDV+ +G +  G+LG G  +    PRL+
Sbjct: 64  DFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSVHPRLV 123

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCW--GWNKYGQLGLGDVIDRNIPSQVT--I 454
           ++ +  NV    V+CG  HT  +   G+++ W  G +  G LG G      IP +++  +
Sbjct: 124 ESLAACNV--DFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGAL 181

Query: 455 EGCVPRNVACGWWHTLLL 472
           +G     V+CG WHT L+
Sbjct: 182 DGLPVAYVSCGTWHTALI 199



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 87/202 (43%), Gaps = 38/202 (18%)

Query: 204 GDENLSAFPCLVTLNP--GVRIATVAAGGRHTLALSDI-----------GQVWGWGYGGE 250
           G  NL++  C   +    G++   VA G  HT A+ ++           G+++ WG G +
Sbjct: 217 GHGNLTSISCPKEVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDK 276

Query: 251 GQLGLG---SRIR-------------MVSSPHPIPCIESSYGKDRSAALS----RGSVNS 290
            +LG G   SR++              V+  H +    ++ GK  S   S     G+ NS
Sbjct: 277 HRLGHGDKESRLKPTCVASLIDYDFYRVACGHSLTVCLTTSGKVLSMGNSVYGQLGNPNS 336

Query: 291 EG--PGF---RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNC 345
           +G  P     R+ G +V  +ACG  H AV+T    + T+G G  G+ G G  +D   P  
Sbjct: 337 DGRLPCLVEDRIAGEHVLQVACGSYHVAVLTGRSEVFTWGKGANGRLGHGDIEDRKVPTQ 396

Query: 346 VSSLLGIQIEGVAAGLWHTICI 367
           V +L    +  +A G   T  I
Sbjct: 397 VEALKDRAVRHIACGANFTAAI 418


>gi|444914429|ref|ZP_21234572.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444714661|gb|ELW55540.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 648

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 138/483 (28%), Positives = 196/483 (40%), Gaps = 74/483 (15%)

Query: 3   GEGQEEKMERVVFMWGYLPGALPQRSPILSPLV---VRLPLTVGSAWRDVCGGGCGFAMA 59
           GEG    + R   +W +   AL Q     S      VR+P   G         G   ++A
Sbjct: 54  GEGHSLALHRDGTVWAWGDNALGQLGDGTSDSHSEPVRVPGLSGVV---AVSAGDNHSLA 110

Query: 60  ISDSRKLITWG--STDDLG-----QSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
           +     +  WG  ++D LG     QSY           P+ L   + +V  AAG  H +A
Sbjct: 111 LRSDGSVWAWGDNNSDQLGGAPGAQSYSV---------PWRLEDLSEVVAVAAGGNHSLA 161

Query: 113 VTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGT 172
           V   G V+ WG           G L  G  L      +Q   L+  V+  +  + S    
Sbjct: 162 VRADGTVWAWG-------DNFAGQLGDGNILTTRWLPKQVQGLSGVVAASAGWAHSMVAL 214

Query: 173 SSGTD-GRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVR-IATVAAGG 230
           S G+    G+   G     IS+                A P  V    G+R +  VAAGG
Sbjct: 215 SDGSVWAWGNNTSGQLGNGISVG-------------YGALPEQV---QGLRGVMAVAAGG 258

Query: 231 RHTLALSDIGQVWGWGYGGEGQLGLGS--------RIRMVS--------SPHPIPCIES- 273
            ++LAL   G +W WG    GQ G GS        R+R +S        S H +      
Sbjct: 259 LYSLALRSDGTLWAWGSNDHGQRGDGSTVYLSSSVRVRWLSGVVAMAAGSAHSLAVRSDG 318

Query: 274 ---SYGKDRSAALSRGSVNSEGPGFRVPG-NYVKGIACGGRHSAVITDAGALLTFGWGLY 329
              ++G +    L  G+        RV G + V  +A G  HS  +   G + T+G+   
Sbjct: 319 TLWAWGANYYGQLGDGTRKDHDTPKRVQGLSRVVAVAAGDGHSIALCADGTVWTWGYNHD 378

Query: 330 GQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD 389
           GQ   GST+D   P  V  L G+    VAAG  H++ + SDG V+A+G N+ GQLG G  
Sbjct: 379 GQLAHGSTNDSPVPLHVRELSGVVA--VAAGALHSLAVLSDGSVWAWGYNRQGQLGDGSL 436

Query: 390 QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIP 449
            +   P  +    L  V   +VS G  H+     DG V+ WG N +GQLG G   +  +P
Sbjct: 437 SSSAEP--VRVQGLSGV--AAVSAGLNHSLARGTDGGVWAWGGNSFGQLGEGTTSNALVP 492

Query: 450 SQV 452
            +V
Sbjct: 493 VRV 495



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 128/425 (30%), Positives = 180/425 (42%), Gaps = 69/425 (16%)

Query: 49  VCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWA 108
           V  GG  +++A+     L  WGS D  GQ     G    +     +   + +V  AAG A
Sbjct: 254 VAAGGL-YSLALRSDGTLWAWGSNDH-GQR--GDGSTVYLSSSVRVRWLSGVVAMAAGSA 309

Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRS 168
           H +AV   G ++ WG          +G L  GT  D D  +R    L+  V+  +    S
Sbjct: 310 HSLAVRSDGTLWAWG-------ANYYGQLGDGTRKDHDTPKRVQG-LSRVVAVAAGDGHS 361

Query: 169 SGGTSSGTDGR-GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVA 227
               + GT    G   +G          Q A     G  N S  P  V    GV    VA
Sbjct: 362 IALCADGTVWTWGYNHDG----------QLAH----GSTNDSPVPLHVRELSGV--VAVA 405

Query: 228 AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGS 287
           AG  H+LA+   G VW WGY  +GQLG GS   + SS  P+                   
Sbjct: 406 AGALHSLAVLSDGSVWAWGYNRQGQLGDGS---LSSSAEPV------------------- 443

Query: 288 VNSEGPGFRVPG-NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCV 346
                   RV G + V  ++ G  HS      G +  +G   +GQ G+G+T + L P  V
Sbjct: 444 --------RVQGLSGVAAVSAGLNHSLARGTDGGVWAWGGNSFGQLGEGTTSNALVPVRV 495

Query: 347 SSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENV 406
             L G  +E ++AG  H++  +SDG ++A+GGN  GQLG G     ++P  +    L  V
Sbjct: 496 RGLSG--VETISAGFNHSLARASDGGLWAWGGNYTGQLGDGTTSNSSVP--VRVQGLSGV 551

Query: 407 HSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCV-PRNVACG 465
              +V  G  H+  +  DG V+ WG N +GQLG G       P  V ++G      VA G
Sbjct: 552 --AAVFAGLNHSLAVRTDGSVWAWGINSFGQLGEGTTNTSFAP--VRVQGLSGMETVAAG 607

Query: 466 WWHTL 470
             H+L
Sbjct: 608 SLHSL 612



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 117/251 (46%), Gaps = 44/251 (17%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
           +AAG  H+LAL   G VW WG    GQLG GS     S  H  P                
Sbjct: 1   MAAGTDHSLALRHDGTVWAWGGNALGQLGDGS-----SDSHSEPV--------------- 40

Query: 286 GSVNSEGPGFRVPG-NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN 344
                     RV G + V  ++ G  HS  +   G +  +G    GQ G G++D    P 
Sbjct: 41  ----------RVRGLSGVVAVSAGEGHSLALHRDGTVWAWGDNALGQLGDGTSDSHSEPV 90

Query: 345 CVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG-GDQAETLP-RLLDAPS 402
            V  L G+    V+AG  H++ + SDG V+A+G N   QLG   G Q+ ++P RL D   
Sbjct: 91  RVPGLSGVVA--VSAGDNHSLALRSDGSVWAWGDNNSDQLGGAPGAQSYSVPWRLEDLSE 148

Query: 403 LENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVI-DRNIPSQVT-IEGCVPR 460
           +      +V+ G  H+  +  DG V+ WG N  GQLG G+++  R +P QV  + G V  
Sbjct: 149 V-----VAVAAGGNHSLAVRADGTVWAWGDNFAGQLGDGNILTTRWLPKQVQGLSGVVA- 202

Query: 461 NVACGWWHTLL 471
             + GW H+++
Sbjct: 203 -ASAGWAHSMV 212



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 94/356 (26%), Positives = 150/356 (42%), Gaps = 49/356 (13%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
           G   ++A+     L  WG+ +  GQ  +  G   +   P  +   + +V  AAG  H +A
Sbjct: 307 GSAHSLAVRSDGTLWAWGA-NYYGQ--LGDGTRKDHDTPKRVQGLSRVVAVAAGDGHSIA 363

Query: 113 VTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGT 172
           +   G V+TWG+          G L+ G+  D  V       L+  V+  +    S    
Sbjct: 364 LCADGTVWTWGYNHD-------GQLAHGSTNDSPV-PLHVRELSGVVAVAAGALHSLAVL 415

Query: 173 SSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRH 232
           S G+                 A         GD +LS+    V +     +A V+AG  H
Sbjct: 416 SDGS---------------VWAWGYNRQGQLGDGSLSSSAEPVRVQGLSGVAAVSAGLNH 460

Query: 233 TLALSDIGQVWGWGYGGEGQLGLGS--------RIRMVSSPHPIPCIES----------- 273
           +LA    G VW WG    GQLG G+        R+R +S    I    +           
Sbjct: 461 SLARGTDGGVWAWGGNSFGQLGEGTTSNALVPVRVRGLSGVETISAGFNHSLARASDGGL 520

Query: 274 -SYGKDRSAALSRGSVNSEGPGFRVPG-NYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
            ++G + +  L  G+ ++     RV G + V  +  G  HS  +   G++  +G   +GQ
Sbjct: 521 WAWGGNYTGQLGDGTTSNSSVPVRVQGLSGVAAVFAGLNHSLAVRTDGSVWAWGINSFGQ 580

Query: 332 CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG 387
            G+G+T+   +P  V  L G+  E VAAG  H++ + SDG ++++G N  GQLG G
Sbjct: 581 LGEGTTNTSFAPVRVQGLSGM--ETVAAGSLHSLSVGSDGSMWSWGNNHHGQLGHG 634



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 81/247 (32%), Positives = 111/247 (44%), Gaps = 32/247 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP----CIESSYGKD 278
           +  V+AG  H+LAL   G VW WG    GQLG G+     S P  +P     +  S G +
Sbjct: 48  VVAVSAGEGHSLALHRDGTVWAWGDNALGQLGDGTSDSH-SEPVRVPGLSGVVAVSAGDN 106

Query: 279 RSAAL-SRGSV------NSE----GPG---FRVPGNY-----VKGIACGGRHSAVITDAG 319
            S AL S GSV      NS+     PG   + VP        V  +A GG HS  +   G
Sbjct: 107 HSLALRSDGSVWAWGDNNSDQLGGAPGAQSYSVPWRLEDLSEVVAVAAGGNHSLAVRADG 166

Query: 320 ALLTFGWGLYGQCGQGST-DDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            +  +G    GQ G G+       P  V  L G+     +AG  H++   SDG V+A+G 
Sbjct: 167 TVWAWGDNFAGQLGDGNILTTRWLPKQVQGLSGVVA--ASAGWAHSMVALSDGSVWAWGN 224

Query: 379 NQFGQLGTGGDQAE-TLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQ 437
           N  GQLG G       LP  +    L  V   +V+ G  ++  +  DG ++ WG N +GQ
Sbjct: 225 NTSGQLGNGISVGYGALPEQVQG--LRGV--MAVAAGGLYSLALRSDGTLWAWGSNDHGQ 280

Query: 438 LGLGDVI 444
            G G  +
Sbjct: 281 RGDGSTV 287


>gi|431917308|gb|ELK16841.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
          Length = 883

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 128/255 (50%), Gaps = 29/255 (11%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           V+IA   + G H LAL+  G+V+ WG G  G+LG G  +     P   P + S++   ++
Sbjct: 497 VKIAA-HSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKLISAFCGKQA 550

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                             G  V  IACG  +SA IT  G L T+G G YG+ G GS++DE
Sbjct: 551 ------------------GQRVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 592

Query: 341 LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
             P  V+ L G+++  VA  +G   T+ ++ +G V+++G   +G+LG GG      P+L+
Sbjct: 593 AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLV 652

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGC 457
           +   L+++    V CG++ +  +  DG+V+ WG     +LG G       P  +  ++G 
Sbjct: 653 E--KLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGK 710

Query: 458 VPRNVACGWWHTLLL 472
              +VA G  H L L
Sbjct: 711 KVIDVAAGSTHCLAL 725



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 98/373 (26%), Positives = 150/373 (40%), Gaps = 75/373 (20%)

Query: 58  MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGW--AHCVAVTE 115
           +A ++ R LI   S     Q+Y +     ++ +        +IVK AA     H +A+  
Sbjct: 457 IACAEKRFLILSRSGRVYTQAYSSDALAPQLVQGL---VSRNIVKIAAHSDGHHYLALAA 513

Query: 116 GGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSG 175
            GEVY+WG   C   GR    L  G  +  +  +  S+F  +Q   R  V  + G T S 
Sbjct: 514 TGEVYSWG---CGDGGR----LGHGDTVPLEEPKLISAFCGKQAGQRV-VHIACGSTYSA 565

Query: 176 ---------TDGRGS-GEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIAT 225
                    T GRG+ G  G                SS DE   A P LV    G+++  
Sbjct: 566 AITAEGELYTWGRGNYGRLG--------------HGSSEDE---AIPMLVAGLKGLKVID 608

Query: 226 VA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAAL 283
           VA  +G   TLA+++ GQVW WG G  G+LG G                           
Sbjct: 609 VACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG--------------------------- 641

Query: 284 SRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL 341
             GS   + P    ++    V  + CG + S  +T  G + ++G G   + G G+ +   
Sbjct: 642 --GSDGCKTPKLVEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVR 699

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
            P  +  L G ++  VAAG  H + ++ D +V+++G N   Q         T P     P
Sbjct: 700 YPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLHATKPEPAALP 757

Query: 402 SLENVHSKSVSCG 414
            L+  H   ++CG
Sbjct: 758 GLDTKHIVGIACG 770



 Score = 41.6 bits (96), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 3/78 (3%)

Query: 48  DVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAA 105
           DV    CG  F++A++   ++ +WG  D+    + T  +H   P+         ++  AA
Sbjct: 659 DVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 717

Query: 106 GWAHCVAVTEGGEVYTWG 123
           G  HC+A+TE  EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735


>gi|50418309|gb|AAH77375.1| MGC81587 protein [Xenopus laevis]
          Length = 677

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 128/273 (46%), Gaps = 38/273 (13%)

Query: 205 DENLSAFP--CLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMV 262
           DE +   P  C   +N  VR   V  G RHT  + D G V+  G    GQLG        
Sbjct: 18  DEEVVIEPRRCDFFINKNVR--DVGCGNRHTGFVLDDGTVYTCGCNDLGQLG-------- 67

Query: 263 SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL 322
                       + K R      G+++++          +  ++CG  H+  + D G + 
Sbjct: 68  ------------HDKSRKKPEQVGALDAQ---------IIVAVSCGEAHTLALNDKGQVF 106

Query: 323 TFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
           ++G   +GQ G    +D +  P  + SL  IQI  VA G  H++ +S + ++Y++G NQ+
Sbjct: 107 SWGHAAHGQIGVSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWGQNQY 166

Query: 382 GQLGTGGDQ-AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL 440
           GQLG G ++  E+ PR +   SL  +    ++ G  H+  +   G +F WG NK+GQLGL
Sbjct: 167 GQLGLGSEKRKESAPRHIK--SLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGL 224

Query: 441 GDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLL 472
            D  DR+ P+ + ++       + CG  HT  L
Sbjct: 225 NDETDRSDPALLKSLRSQKIIYICCGEDHTAAL 257



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 82/261 (31%), Positives = 125/261 (47%), Gaps = 36/261 (13%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS-----RI-RMVSSPHPIPCIESSYG 276
           I  V+ G  HTLAL+D GQV+ WG+   GQ+G+       R+ R + S   I  ++ + G
Sbjct: 86  IVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGVSIAEDYIRVPRNIKSLSDIQIVQVACG 145

Query: 277 KDRSAALSRGS--------------VNSEGPGFRVPGNYVKG--------IACGGRHSAV 314
              S ALS+ S              + SE      P  ++K         IA GG HS  
Sbjct: 146 HHHSLALSKESNIYSWGQNQYGQLGLGSEKRKESAP-RHIKSLSGIPFAHIAAGGGHSFA 204

Query: 315 ITDAGALLTFGWGL--YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGD 372
           +T +GA+  FGWG   +GQ G     D   P  + SL   +I  +  G  HT  ++ +G 
Sbjct: 205 LTISGAI--FGWGRNKFGQLGLNDETDRSDPALLKSLRSQKIIYICCGEDHTAALTKEGG 262

Query: 373 VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           V+ FG   +GQLG      E  PR +    + N+ ++ ++CG +HT A +   G+++ +G
Sbjct: 263 VFTFGAGGYGQLGHNSASHEVNPRKV-FELMGNIVTQ-IACGRQHTLAFVPSSGRIYSFG 320

Query: 432 WNKYGQLGLGDVIDRNIPSQV 452
               GQLG+G   ++  PS V
Sbjct: 321 LGGNGQLGIGSTSNKKSPSMV 341



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 105/373 (28%), Positives = 154/373 (41%), Gaps = 69/373 (18%)

Query: 37  RLPLTVGSAWRDV-CGG-GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPL 94
           R    +    RDV CG    GF +   D   + T G  +DLGQ  +   K  + PE    
Sbjct: 27  RCDFFINKNVRDVGCGNRHTGFVL---DDGTVYTCG-CNDLGQ--LGHDKSRKKPEQVGA 80

Query: 95  PTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSF 154
                IV  + G AH +A+ + G+V++WG           G +      D     R    
Sbjct: 81  LDAQIIVAVSCGEAHTLALNDKGQVFSWGHA-------AHGQIGVSIAEDYIRVPRNIKS 133

Query: 155 LTE----QVS----PRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDE 206
           L++    QV+        +S+ S   S G +  G    GS++R+        ES+    +
Sbjct: 134 LSDIQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKRK--------ESAPRHIK 185

Query: 207 NLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPH 266
           +LS  P           A +AAGG H+ AL+  G ++GWG    GQLGL           
Sbjct: 186 SLSGIP----------FAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDE-------- 227

Query: 267 PIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGW 326
                      DRS      S+ S+          +  I CG  H+A +T  G + TFG 
Sbjct: 228 ----------TDRSDPALLKSLRSQK---------IIYICCGEDHTAALTKEGGVFTFGA 268

Query: 327 GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFGGNQFGQLG 385
           G YGQ G  S   E++P  V  L+G  +  +A G  HT+  + S G +Y+FG    GQLG
Sbjct: 269 GGYGQLGHNSASHEVNPRKVFELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLG 328

Query: 386 TGGDQAETLPRLL 398
            G    +  P ++
Sbjct: 329 IGSTSNKKSPSMV 341



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 76/160 (47%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  + P      +   +  V  G  HT  +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEVVIEPRRCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQLG   D++   P  + A   + +   +VSCG  HT  + D G+VF WG   +GQ+
Sbjct: 61  NDLGQLGH--DKSRKKPEQVGALDAQII--VAVSCGEAHTLALNDKGQVFSWGHAAHGQI 116

Query: 439 GLGDVID-----RNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           G+    D     RNI S   I+      VACG  H+L L+
Sbjct: 117 GVSIAEDYIRVPRNIKSLSDIQIV---QVACGHHHSLALS 153


>gi|426378407|ref|XP_004055918.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
           HERC2-like, partial [Gorilla gorilla gorilla]
          Length = 4586

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 138/289 (47%), Gaps = 30/289 (10%)

Query: 189 RRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAA--GGRHTLALSDIGQVWGWG 246
           +R+ +  +     +    + +  P LV       +  +AA   G H LAL+  G+V+ WG
Sbjct: 438 KRLLIVXRNGRVXTQAYNSDTLVPQLVQGLASRNVVKIAAHSDGHHYLALAATGEVYSWG 497

Query: 247 YGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIA 306
            G   +LG G  +     P   P + S++   ++                  G +V  IA
Sbjct: 498 CGDGRRLGHGDTV-----PLEEPKVISAFSGKQA------------------GKHVVHIA 534

Query: 307 CGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA--AGLWHT 364
           CG  +SA IT  G L T+G G YG+ G GS++DE  P  V+ L G+++  VA  +G   T
Sbjct: 535 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQT 594

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           + ++ +G V+++G   +G+LG GG      P+L++   L+++    V CG++ +  +  D
Sbjct: 595 LAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE--KLQDLDVVKVRCGSQFSIALTKD 652

Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
           G+V+ WG     +LG G       P  +  ++G    +VA G  H L L
Sbjct: 653 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 701



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 128/303 (42%), Gaps = 80/303 (26%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GGRH  AL+  G+V+ WG G +G+LG  SR+     P  I  +++   +D  
Sbjct: 2799 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRD-- 2855

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                    IACG  HSA +T +G L T+G G YG+ G G    +
Sbjct: 2856 ------------------------IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ 2891

Query: 341  LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V  LLG ++  VA G     T+ ++ +G V+++G   FG+LG GG +   +P+ +
Sbjct: 2892 LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNI 2951

Query: 399  DAPSLE------------------------------------NVHSKS------------ 410
            +  + +                                    +VH +             
Sbjct: 2952 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI 3011

Query: 411  --VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWW 467
              V+ GA H   + D G+V+ WG N +GQ G G       P+ V  +EG     VACG  
Sbjct: 3012 VHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3071

Query: 468  HTL 470
            H++
Sbjct: 3072 HSV 3074



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 144/365 (39%), Gaps = 82/365 (22%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V   +G  HC+A++  GEVY+WG  E         D   G G ++   +R    + E + 
Sbjct: 3794 VAVNSGGKHCLALSSEGEVYSWGEAE---------DGKLGHG-NRSPCDRPR--VIESLR 3841

Query: 161  PRSQVSRSSGGTSSG-TDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
                V  ++GG  S      G      K R   L    +E            P LV    
Sbjct: 3842 GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLK--------PKLVEALQ 3893

Query: 220  GVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
            G R+  +A  +G   TL L+D   VW WG G  G+LG G                   G 
Sbjct: 3894 GHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-------------------GS 3934

Query: 278  DRSAALSRGSVNSEGPGFRVPGNY-------VKGIACGGRHSAVITDAGALLTFGWGLYG 330
            D               G +VP          V  + CG + S  +T +GA+ T+G G Y 
Sbjct: 3935 D---------------GCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 3979

Query: 331  QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            + G GS D    P  V  L G ++  +A G  H +C + DG+VY +G N  GQLG G   
Sbjct: 3980 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTN 4039

Query: 391  AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
            A   PRL+ A  L+      V+CG+ HT           W  +K    G        +P+
Sbjct: 4040 AIQRPRLVAA--LQGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPA 4081

Query: 451  QVTIE 455
            QV +E
Sbjct: 4082 QVPME 4086



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 111/399 (27%), Positives = 165/399 (41%), Gaps = 60/399 (15%)

Query: 55   GFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVT 114
            G   A +   K+  WG  +D  Q     G   ++P      +  ++V+ A G     AVT
Sbjct: 2702 GLESAATIRTKVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT 2760

Query: 115  EGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG--- 171
              G+VY  G      +GR+   +S+GT        RQ + L+  V  +  V+  SGG   
Sbjct: 2761 VEGKVYACGE---ATNGRLGLGISSGTV----PIPRQITALSSYVVKK--VAVHSGGRHA 2811

Query: 172  TSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVA 227
            T+   DG+    G G++G         K    S  + D+     P L+      RI  +A
Sbjct: 2812 TALTVDGKVFSWGEGDDG---------KLGHFSRMNCDK-----PRLIEALKTKRIRDIA 2857

Query: 228  AGGRHTLALSDIGQVWGWGYGGEGQLGLGS-----RIRMVSSPHPIPCIESSYGKDRSAA 282
             G  H+ AL+  G+++ WG G  G+LG G      + +MV        I+ + G   +  
Sbjct: 2858 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 2917

Query: 283  LS---RGSVNSEGPG-------------------FRVPGNYVKGIACGGRHSAVITDAGA 320
            L+    G V S G G                    R+ G  V  I CG + S  +T +G 
Sbjct: 2918 LALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGV 2977

Query: 321  LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
            + T+G G Y + G GS      P  V  L G +I  VA G  H + ++  G VYA+G N 
Sbjct: 2978 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDND 3037

Query: 381  FGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
             GQ G G       P L+    LE      V+CG+ H+ 
Sbjct: 3038 HGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 3074



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 120/268 (44%), Gaps = 42/268 (15%)

Query: 233  TLALSDIGQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAALSRG---- 286
            TL+    G ++GWG+   GQLG   G+++++     P PC   +    R   L  G    
Sbjct: 3697 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKV-----PTPC--EALATLRPVQLIGGEQTL 3749

Query: 287  -SVNSEGPGF-------------------------RVPGNYVKGIAC--GGRHSAVITDA 318
             +V ++G  +                          +   ++K +A   GG+H   ++  
Sbjct: 3750 LAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 3809

Query: 319  GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            G + ++G    G+ G G+      P  + SL GI++  VAAG  H+ C+++ GD+Y +G 
Sbjct: 3810 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGK 3869

Query: 379  NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
             ++G+LG    + +  P+L++A     V   +   G   T  + DD  V+ WG   YG+L
Sbjct: 3870 GRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKL 3929

Query: 439  GLGDVIDRNIPSQV-TIEGCVPRNVACG 465
            G G      +P ++ ++ G     V CG
Sbjct: 3930 GRGGSDGCKVPMKIDSLTGLGVVKVECG 3957



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 99/220 (45%), Gaps = 31/220 (14%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G  +  +A G  ++ A++  G+++ WG G  G+LG GS     S    IP + +      
Sbjct: 527 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS-----SEDEAIPMLVAG----- 576

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGG--RHSAVITDAGALLTFGWGLYGQCGQGST 337
                            + G  V  +ACG     +  +T+ G + ++G G YG+ G+G +
Sbjct: 577 -----------------LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS 619

Query: 338 DDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
           D   +P  +  L  + +  V  G   +I ++ DG VY++G     +LG G ++    P+L
Sbjct: 620 DGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKL 679

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQ 437
           L+   L+      V+ G+ H   + +D +V  WG N   Q
Sbjct: 680 LEG--LQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 717



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 92/217 (42%), Gaps = 38/217 (17%)

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
           SS DE   A P LV    G+++  VA  +G   TLA+++ GQVW WG G  G+LG G   
Sbjct: 564 SSEDE---AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG--- 617

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITD 317
                                     GS   + P    ++    V  + CG + S  +T 
Sbjct: 618 --------------------------GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTK 651

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
            G + ++G G   + G G+ +    P  +  L G ++  VAAG  H + ++ D +V+++G
Sbjct: 652 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 711

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
            N   Q         T P     P L+  H   ++CG
Sbjct: 712 SND--QCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 746



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 120/276 (43%), Gaps = 48/276 (17%)

Query: 205  DENLSAFPCLVTLNP---------GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG- 254
            +E+L+A P L + N          G  I   AAG      +    +V+ WG   + QLG 
Sbjct: 2669 EEDLAAVPFLASDNEEEEDEKGNSGSLIRKKAAGLESAATIR--TKVFVWGLNDKDQLGG 2726

Query: 255  -LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSA 313
              GS+I++            S+ +  SA                  N V+ +A G +   
Sbjct: 2727 LKGSKIKV-----------PSFSETLSAL-----------------NVVQ-VAGGSKSLF 2757

Query: 314  VITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVA--AGLWHTICISSD 370
             +T  G +   G    G+ G G +   +  P  +++L    ++ VA  +G  H   ++ D
Sbjct: 2758 AVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVD 2817

Query: 371  GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
            G V+++G    G+LG         PRL++A  L+    + ++CG+ H+A +   G+++ W
Sbjct: 2818 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEA--LKTKRIRDIACGSSHSAALTSSGELYTW 2875

Query: 431  GWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACG 465
            G  +YG+LG GD   +  P  V +  G     VACG
Sbjct: 2876 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 2911



 Score = 42.4 bits (98), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 3/78 (3%)

Query: 48  DVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAA 105
           DV    CG  F++A++   ++ +WG  D+    + T  +H   P+         ++  AA
Sbjct: 635 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 693

Query: 106 GWAHCVAVTEGGEVYTWG 123
           G  HC+A+TE  EV++WG
Sbjct: 694 GSTHCLALTEDSEVHSWG 711



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 5/73 (6%)

Query: 53   GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
            G  F++A++ S  + TWG  D   LG     S  H   P          ++  A G  HC
Sbjct: 3957 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRRPRQVQGLQGKKVIAIATGSLHC 4013

Query: 111  VAVTEGGEVYTWG 123
            V  TE GEVYTWG
Sbjct: 4014 VCCTEDGEVYTWG 4026


>gi|330836034|ref|YP_004410675.1| chromosome condensation regulator RCC1 [Sphaerochaeta coccoides DSM
           17374]
 gi|329747937|gb|AEC01293.1| regulator of chromosome condensation RCC1 [Sphaerochaeta coccoides
           DSM 17374]
          Length = 727

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 118/261 (45%), Gaps = 40/261 (15%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  V+AG  HT+ L   G +W  G    GQLG+G+ +   +S  P+  +           
Sbjct: 460 VKEVSAGLYHTMILQKDGTLWATGRNNYGQLGVGAELTYTTSI-PVQVMTD--------- 509

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                              V  ++ G  H+ ++   G L   G   YGQ G G+  +  +
Sbjct: 510 -------------------VAAVSAGEHHAIILKMDGTLWATGQNPYGQLGDGTMTNRST 550

Query: 343 PNCVSSL-----LGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
           P  V +          +  V AG+ HTI +  DG ++A G N +GQLG G     + P  
Sbjct: 551 PVQVKASTTPDDFMTDVVAVFAGINHTIILKKDGTLWATGSNGYGQLGDGTTTNRSTPVQ 610

Query: 398 LDA---PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVI---DRNIPSQ 451
           + A   PS      K VS G+ +T ++  DG ++  G+N+YGQLGLGD++   +R  P Q
Sbjct: 611 VKASTTPSDFMTDVKEVSAGSSYTMILKKDGTLWATGYNEYGQLGLGDILPGTNRTTPEQ 670

Query: 452 VTIEGCVPRNVACGWWHTLLL 472
           V+  G     V+ G  HT++L
Sbjct: 671 VSSMGSGVAGVSVGNSHTMIL 691



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/270 (30%), Positives = 123/270 (45%), Gaps = 35/270 (12%)

Query: 219 PGVRI--ATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI---RMVSSPHPIPCIES 273
           P V++   +V+AGG  T+ L   G +W  G    GQLG+G  +      S+P P+  + +
Sbjct: 330 PAVKVGVKSVSAGGYLTMILKTDGTLWATGLNSYGQLGVGETLLPETKTSTPVPVTSMNA 389

Query: 274 SYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCG 333
               +   A S G ++  G GF               H+ ++   G+L   G   YGQ G
Sbjct: 390 D-PNNPVVATSGGVLSYNGTGFV-------------SHTMILKKNGSLWATGHNAYGQLG 435

Query: 334 QGSTDDELSPNCVSSLLGI----QIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD 389
            G T D  +P  V    G+     ++ V+AGL+HT+ +  DG ++A G N +GQLG G +
Sbjct: 436 IGGTTDISTPEQVKGFGGVGVMTDVKEVSAGLYHTMILQKDGTLWATGRNNYGQLGVGAE 495

Query: 390 QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIP 449
               L      P        +VS G  H  ++  DG ++  G N YGQLG G + +R+ P
Sbjct: 496 ----LTYTTSIPVQVMTDVAAVSAGEHHAIILKMDGTLWATGQNPYGQLGDGTMTNRSTP 551

Query: 450 SQVTIEGCVPRN-------VACGWWHTLLL 472
            QV      P +       V  G  HT++L
Sbjct: 552 VQVK-ASTTPDDFMTDVVAVFAGINHTIIL 580



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 74/169 (43%), Gaps = 26/169 (15%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  V AG  HT+ L   G +W  G  G GQLG G+     +   P+    S+   D    
Sbjct: 567 VVAVFAGINHTIILKKDGTLWATGSNGYGQLGDGTTTNRST---PVQVKASTTPSD---- 619

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST---DD 339
                       F      VK ++ G  ++ ++   G L   G+  YGQ G G      +
Sbjct: 620 ------------FMTD---VKEVSAGSSYTMILKKDGTLWATGYNEYGQLGLGDILPGTN 664

Query: 340 ELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGG 388
             +P  VSS+ G  + GV+ G  HT+ +  DG ++A G N  GQLG GG
Sbjct: 665 RTTPEQVSSM-GSGVAGVSVGNSHTMILKKDGTLWATGRNTDGQLGLGG 712


>gi|432931000|ref|XP_004081565.1| PREDICTED: uncharacterized protein LOC101156289 [Oryzias latipes]
          Length = 1512

 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 80/269 (29%), Positives = 126/269 (46%), Gaps = 55/269 (20%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            R+  ++AG   + AL+D G+++ WG    GQ+GLG  +   + P  +            
Sbjct: 89  ARVTMLSAGCSTSAALTDDGRLFMWGDNSAGQIGLGDEL-FTAEPREVGV---------- 137

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG--STD 338
                             G  VK ++CG  HSA +T AG L TFG    G+ G      D
Sbjct: 138 ------------------GEAVKWVSCGNSHSAFVTVAGDLYTFGESANGRLGLQVEQLD 179

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           +   P  V  +LG  +  V  G  HT+ ++ + DV+ FGG ++GQLG G         L 
Sbjct: 180 NHRVPQRVQGVLG-HVTQVCCGGQHTVVLTGE-DVFTFGGGRYGQLGHGT-------FLF 230

Query: 399 DAP---SLENVHS---KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
           +AP    L++ H    + ++CG  HTAVI + G ++ +G  ++G+LGL    + N  +Q 
Sbjct: 231 EAPWPKPLQHFHKCSVRQIACGENHTAVITNGGLLYTFGDGRHGKLGL---TEENFVNQF 287

Query: 453 TIEGCVP------RNVACGWWHTLLLAVP 475
           +   C        ++V+CG  H L+LA P
Sbjct: 288 SPTLCTQFLKFHVQSVSCGDHHMLVLAAP 316



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 90/186 (48%), Gaps = 17/186 (9%)

Query: 295 FRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDD-----ELSPNCVSSL 349
           F +  +Y   ++CG  HSAVIT    +   G     Q GQ  +       +L P C  + 
Sbjct: 31  FWLKNDYPARVSCGREHSAVITAEDRVYYAGRNQKAQLGQCRSPKTGSFLQLHPFCQRAR 90

Query: 350 LGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSK 409
           + +    ++AG   +  ++ DG ++ +G N  GQ+G G +     PR +     E V  K
Sbjct: 91  VTM----LSAGCSTSAALTDDGRLFMWGDNSAGQIGLGDELFTAEPREVGVG--EAV--K 142

Query: 410 SVSCGARHTAVIADDGKVFCWGWNKYGQLGLG--DVIDRNIPSQVT-IEGCVPRNVACGW 466
            VSCG  H+A +   G ++ +G +  G+LGL    + +  +P +V  + G V + V CG 
Sbjct: 143 WVSCGNSHSAFVTVAGDLYTFGESANGRLGLQVEQLDNHRVPQRVQGVLGHVTQ-VCCGG 201

Query: 467 WHTLLL 472
            HT++L
Sbjct: 202 QHTVVL 207



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 73/168 (43%), Gaps = 16/168 (9%)

Query: 309 GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS--LLGIQIEGVAAGLWHTIC 366
           GR    I + GA+ TFG   +              N  S   L       V+ G  H+  
Sbjct: 3   GRTDTDIPETGAIFTFGRSSFAD------------NLPSRFWLKNDYPARVSCGREHSAV 50

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           I+++  VY  G NQ  QLG      +T   L   P  +      +S G   +A + DDG+
Sbjct: 51  ITAEDRVYYAGRNQKAQLGQCRS-PKTGSFLQLHPFCQRARVTMLSAGCSTSAALTDDGR 109

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAV 474
           +F WG N  GQ+GLGD +    P +V + G   + V+CG  H+  + V
Sbjct: 110 LFMWGDNSAGQIGLGDELFTAEPREVGV-GEAVKWVSCGNSHSAFVTV 156


>gi|332841362|ref|XP_003314204.1| PREDICTED: RCC1 and BTB domain-containing protein 2, partial [Pan
           troglodytes]
          Length = 552

 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 70/203 (34%), Positives = 110/203 (54%), Gaps = 7/203 (3%)

Query: 276 GKDRSAALSRGSVNSEGPGFRVPGNYVKGIAC----GGRHSAVITDAGALLTFGWGLYGQ 331
           G +    L  G V S     R+     K IAC     G H  + T  G + T+G   Y Q
Sbjct: 74  GTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQ 133

Query: 332 CGQGSTDDELSPNCVSS-LLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            G G+T+  L P  +S+ L   Q+  VA G +H++ ++SDG+V+A+G N  GQ+G+G   
Sbjct: 134 LGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTV 193

Query: 391 AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
            + +PR +    L+N    +++CG      + D G+V+ WG+N  GQLGLG+  ++  P 
Sbjct: 194 NQPIPRRVTG-CLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPC 252

Query: 451 QVT-IEGCVPRNVACGWWHTLLL 472
           +V  ++G   + VACG+ HTL+L
Sbjct: 253 RVAALQGIRVQRVACGYAHTLVL 275



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 122/244 (50%), Gaps = 31/244 (12%)

Query: 214 LVTLNPGVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIE 272
           L +LN G +IA ++ G G H +  +  G+V+ WG+    QLG G+     ++   +PC  
Sbjct: 95  LDSLN-GKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT-----TNHGLVPCHI 148

Query: 273 SSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQC 332
           S+                      +    V  +ACG  HS V+T  G +  +G+   GQ 
Sbjct: 149 ST---------------------NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQV 187

Query: 333 GQGSTDDELSPNCVSSLLGIQIE-GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
           G GST ++  P  V+  L  ++   +A G    + +   G+VY +G N  GQLG G    
Sbjct: 188 GSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGN 247

Query: 392 ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
           +  P  + A  L+ +  + V+CG  HT V+ D+G+V+ WG N YGQLG G+  +++ P+ 
Sbjct: 248 QPTPCRVAA--LQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 305

Query: 452 VTIE 455
           VT+E
Sbjct: 306 VTVE 309



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 109/231 (47%), Gaps = 30/231 (12%)

Query: 203 SGDENLSAFPCLVTLN-PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +G  N    PC ++ N    ++  VA G  H+L L+  G+V+ WGY   GQ+G GS +  
Sbjct: 136 NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVN- 194

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
                PIP         R     +  V             V  IACG      + D G +
Sbjct: 195 ----QPIP--------RRVTGCLQNKV-------------VVTIACGQMCCMAVVDTGEV 229

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             +G+   GQ G G++ ++ +P  V++L GI+++ VA G  HT+ ++ +G VYA+G N +
Sbjct: 230 YVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSY 289

Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           GQLGTG    ++ P  +       +  +  +C + HT A     G V+ WG
Sbjct: 290 GQLGTGNKSNQSYPTPVTVEKDRII--EIAACHSTHTSAAKTQGGHVYMWG 338



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 56/115 (48%), Gaps = 23/115 (20%)

Query: 370 DGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR----HTAVIADDG 425
           + +++  G N  G LG G  Q+   PR LD+     ++ K ++C +     H  +   +G
Sbjct: 67  NDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS-----LNGKKIACLSYGSGPHIVLATTEG 121

Query: 426 KVFCWGWNKYGQLGLGDV--------IDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           +VF WG N Y QLG G          I  N+ ++  IE      VACG +H+L+L
Sbjct: 122 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIE------VACGSYHSLVL 170



 Score = 40.0 bits (92), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 55/133 (41%), Gaps = 17/133 (12%)

Query: 14  VFMWGYL-PGALPQRSPILSPLVVRLP--LTVGSAWRDVCGGGCGFAMAISDSRKLITWG 70
           VF WGY   G +   S +  P+  R+   L         CG  C   MA+ D+ ++  WG
Sbjct: 176 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMC--CMAVVDTGEVYVWG 233

Query: 71  STDDLGQSYVTSGKHGEIPEPFPLPTEASI--VKAAAGWAHCVAVTEGGEVYTWGWKECV 128
                G   +  G  G  P P  +     I   + A G+AH + +T+ G+VY WG     
Sbjct: 234 YN---GNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG----- 285

Query: 129 PSGRVFGDLSTGT 141
                +G L TG 
Sbjct: 286 --ANSYGQLGTGN 296


>gi|332241905|ref|XP_003270125.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
           [Nomascus leucogenys]
          Length = 556

 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 84/282 (29%), Positives = 138/282 (48%), Gaps = 22/282 (7%)

Query: 208 LSAFPCLVTL-NPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGL----------G 256
           +SA P  + L NP  ++         +L + D+G+   +    E +L L          G
Sbjct: 1   MSALPSDLELSNPREKLTKPVQATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAG 60

Query: 257 SRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIAC----GGRHS 312
           + +   +    I  +    G +    L  G V S     R+     K IAC     G H 
Sbjct: 61  NEVLYTTVNDEIFVL----GTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHI 116

Query: 313 AVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS-LLGIQIEGVAAGLWHTICISSDG 371
            + T  G + T+G   Y Q G G+T+  L P  +S+ L   Q+  VA G +H++ ++SDG
Sbjct: 117 VLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDG 176

Query: 372 DVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWG 431
           +V+A+G N  GQ+G+G    + +PR +    L+N    +++CG      + D G+V+ WG
Sbjct: 177 EVFAWGYNNSGQVGSGSTVNQPIPRRVTG-CLQNKVVVTIACGQMCCMAVVDTGEVYVWG 235

Query: 432 WNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
           +N  GQLGLG+  ++  P +V  ++G   + VACG+ HTL+L
Sbjct: 236 YNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 277



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 80/259 (30%), Positives = 127/259 (49%), Gaps = 32/259 (12%)

Query: 214 LVTLNPGVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIE 272
           L +LN G +IA ++ G G H +  +  G+V+ WG+    QLG G+     ++   +PC  
Sbjct: 97  LDSLN-GKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT-----TNHGLVPCHI 150

Query: 273 SSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQC 332
           S+                      +    V  +ACG  HS V+T  G +  +G+   GQ 
Sbjct: 151 ST---------------------NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQV 189

Query: 333 GQGSTDDELSPNCVSSLLGIQIE-GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
           G GST ++  P  V+  L  ++   +A G    + +   G+VY +G N  GQLG G    
Sbjct: 190 GSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGN 249

Query: 392 ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
           +  P  + A  L+ +  + V+CG  HT V+ D+G+V+ WG N YGQLG G+  +++ P+ 
Sbjct: 250 QPTPCRVAA--LQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 307

Query: 452 VTIE-GCVPRNVACGWWHT 469
           VT+E   +    AC   HT
Sbjct: 308 VTVEKDRIIEIAACHSTHT 326



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 109/231 (47%), Gaps = 30/231 (12%)

Query: 203 SGDENLSAFPCLVTLN-PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +G  N    PC ++ N    ++  VA G  H+L L+  G+V+ WGY   GQ+G GS +  
Sbjct: 138 NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVN- 196

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
                PIP         R     +  V             V  IACG      + D G +
Sbjct: 197 ----QPIP--------RRVTGCLQNKV-------------VVTIACGQMCCMAVVDTGEV 231

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             +G+   GQ G G++ ++ +P  V++L GI+++ VA G  HT+ ++ +G VYA+G N +
Sbjct: 232 YVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSY 291

Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           GQLGTG    ++ P  +       +  +  +C + HT A     G V+ WG
Sbjct: 292 GQLGTGNKSNQSYPTPVTVEKDRII--EIAACHSTHTSAAKTQGGHVYMWG 340



 Score = 39.3 bits (90), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 55/133 (41%), Gaps = 17/133 (12%)

Query: 14  VFMWGYL-PGALPQRSPILSPLVVRLP--LTVGSAWRDVCGGGCGFAMAISDSRKLITWG 70
           VF WGY   G +   S +  P+  R+   L         CG  C   MA+ D+ ++  WG
Sbjct: 178 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMC--CMAVVDTGEVYVWG 235

Query: 71  STDDLGQSYVTSGKHGEIPEPFPLPTEASI--VKAAAGWAHCVAVTEGGEVYTWGWKECV 128
                G   +  G  G  P P  +     I   + A G+AH + +T+ G+VY WG     
Sbjct: 236 YN---GNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG----- 287

Query: 129 PSGRVFGDLSTGT 141
                +G L TG 
Sbjct: 288 --ANSYGQLGTGN 298


>gi|90657578|gb|ABD96878.1| hypothetical protein [Cleome spinosa]
          Length = 393

 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 109/435 (25%), Positives = 164/435 (37%), Gaps = 118/435 (27%)

Query: 57  AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEG 116
           ++AI D   L TWG        +    K   IP          IV+AA G  HC+AV + 
Sbjct: 50  SLAICDDGTLFTWGWNQRGTLGHPPETKTENIPSQVKALANVKIVQAAIGGWHCLAVDDQ 109

Query: 117 GEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGT 176
           G  Y WG       G  +G      G  KD  ER                          
Sbjct: 110 GRAYAWG-------GNEYGQCGEEPG--KDEMER-------------------------- 134

Query: 177 DGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLAL 236
                      RR I + K+ A                    P + +  VAAGG H++ L
Sbjct: 135 ---------PLRRDIVIPKRCA--------------------PKLVVRQVAAGGTHSVVL 165

Query: 237 SDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFR 296
           +  G VW WG     Q      I+ +S P  +  +E+                       
Sbjct: 166 TREGHVWSWG-----QPWPPGDIKQISIPVRVQGLEN----------------------- 197

Query: 297 VPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG 356
                V+ IA G  H+  + + G L  +G   YGQ G G T     P  V  L  + +  
Sbjct: 198 -----VRLIAVGAFHNLALEENGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLDSLTLVD 252

Query: 357 VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ--AETLPRLLDAPSLENVHSKSVSCG 414
           +AAG WH+  ++  G+VY +G  + G+LG G +   ++ LP+ ++  + E++    VSCG
Sbjct: 253 IAAGGWHSTALTDKGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDI--IQVSCG 310

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE-----------------GC 457
             H+  +  DG++F +G   +G+LG G  +    P  V ++                   
Sbjct: 311 GTHSVALTRDGRIFSFGRGDHGRLGCGRKVTTGQPLDVPVKIPPPEGQFNDAAEDDDGKW 370

Query: 458 VPRNVACGWWHTLLL 472
           V + VACG  HTL +
Sbjct: 371 VAKVVACGGRHTLAI 385



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 94/226 (41%), Gaps = 57/226 (25%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDELSPNCVSSLLGIQIEGVAAG 360
           V+ +  G R+S  I D G L T+GW   G  G    T  E  P+ V +L  ++I   A G
Sbjct: 40  VRSVVSGSRNSLAICDDGTLFTWGWNQRGTLGHPPETKTENIPSQVKALANVKIVQAAIG 99

Query: 361 LWHTICISSDGDVYAFGGNQFGQLGT--GGDQAET-LPRLLDAPS--------------- 402
            WH + +   G  YA+GGN++GQ G   G D+ E  L R +  P                
Sbjct: 100 GWHCLAVDDQGRAYAWGGNEYGQCGEEPGKDEMERPLRRDIVIPKRCAPKLVVRQVAAGG 159

Query: 403 -----------------------------------LENVHSKSVSCGARHTAVIADDGKV 427
                                              LENV  + ++ GA H   + ++G +
Sbjct: 160 THSVVLTREGHVWSWGQPWPPGDIKQISIPVRVQGLENV--RLIAVGAFHNLALEENGTL 217

Query: 428 FCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
           + WG N+YGQLG GD   R+ P  V  ++     ++A G WH+  L
Sbjct: 218 WAWGNNEYGQLGTGDTQPRSQPIPVQGLDSLTLVDIAAGGWHSTAL 263



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 54/102 (52%), Gaps = 4/102 (3%)

Query: 373 VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGW 432
           V A+G  + GQLG G +  +    +++A  LE    +SV  G+R++  I DDG +F WGW
Sbjct: 7   VIAWGSGEDGQLGLGTNDEKEWVCVVEA--LEPYAVRSVVSGSRNSLAICDDGTLFTWGW 64

Query: 433 NKYGQLGL-GDVIDRNIPSQVTIEGCVP-RNVACGWWHTLLL 472
           N+ G LG   +    NIPSQV     V     A G WH L +
Sbjct: 65  NQRGTLGHPPETKTENIPSQVKALANVKIVQAAIGGWHCLAV 106



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 76/309 (24%), Positives = 123/309 (39%), Gaps = 54/309 (17%)

Query: 18  GYLPGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQ 77
           G  PG      P+   +V+          R V  GG   ++ ++    + +WG      Q
Sbjct: 124 GEEPGKDEMERPLRRDIVIPKRCAPKLVVRQVAAGGT-HSVVLTREGHVWSWG------Q 176

Query: 78  SYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDL 137
            +   G   +I  P  +    ++   A G  H +A+ E G ++ WG  E       +G L
Sbjct: 177 PW-PPGDIKQISIPVRVQGLENVRLIAVGAFHNLALEENGTLWAWGNNE-------YGQL 228

Query: 138 STGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG--TSSGTD-----GRGSGEEGSKRRR 190
            TG     D   R      + +   + V  ++GG  +++ TD     G G GE G    R
Sbjct: 229 GTG-----DTQPRSQPIPVQGLDSLTLVDIAAGGWHSTALTDKGEVYGWGRGEHG----R 279

Query: 191 ISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGE 250
           +             D++    P  V L  G  I  V+ GG H++AL+  G+++ +G G  
Sbjct: 280 LGFGDN--------DKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDH 331

Query: 251 GQLGLGSRIRMVSSPHPIPC-IESSYGKDRSAALSRGSVNSEGPGFRVPGNYV-KGIACG 308
           G+LG G ++     P  +P  I    G+   AA                G +V K +ACG
Sbjct: 332 GRLGCGRKV-TTGQPLDVPVKIPPPEGQFNDAAEDD------------DGKWVAKVVACG 378

Query: 309 GRHSAVITD 317
           GRH+  I +
Sbjct: 379 GRHTLAIVE 387


>gi|125550526|gb|EAY96235.1| hypothetical protein OsI_18130 [Oryza sativa Indica Group]
          Length = 994

 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 121/258 (46%), Gaps = 41/258 (15%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G+ +A V+ G  HT  ++ +GQ++ +G G  G LG G+ +  +S P  +  +        
Sbjct: 260 GLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGN-LTSISCPKEVESLS------- 311

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITD-----------AGALLTFGWGL 328
                              G     +ACG  H+A I +           AG L T+G G 
Sbjct: 312 -------------------GLKTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGD 352

Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGG 388
             + G G  +  L P CV+SL+      VA G   T+C+++ G V + G + +GQLG   
Sbjct: 353 KHRLGHGDKESRLKPTCVASLIDYDFYRVACGHSLTVCLTTSGKVLSMGNSVYGQLGNPN 412

Query: 389 DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNI 448
                LP L++   +   H   V+CG+ H AV+    +VF WG    G+LG GD+ DR +
Sbjct: 413 SDGR-LPCLVE-DRIAGEHVLQVACGSYHVAVLTGRSEVFTWGKGANGRLGHGDIEDRKV 470

Query: 449 PSQV-TIEGCVPRNVACG 465
           P+QV  ++    R++ACG
Sbjct: 471 PTQVEALKDRAVRHIACG 488



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 58/171 (33%), Positives = 95/171 (55%), Gaps = 4/171 (2%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V  + CG RH+A++T  G + T+G    G+ G G+ +D + P  V SL    ++ VA G 
Sbjct: 156 VYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNVDFVACGE 215

Query: 362 WHTICISSDGDVYAFGG--NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
           +HT  +++ G++Y +G   +  G LG G D    +P+ +   +L+ +    VSCG  HTA
Sbjct: 216 FHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISG-ALDGLPVAYVSCGTWHTA 274

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
           +I   G++F +G   +G LG G++   + P +V ++ G     VACG WHT
Sbjct: 275 LITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESLSGLKTIAVACGVWHT 325



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 72/138 (52%), Gaps = 6/138 (4%)

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D L P  + S L + +  V  G+ H   ++ +GDV+ +G +  G+LG G  +    PRL+
Sbjct: 141 DFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSVHPRLV 200

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCW--GWNKYGQLGLGDVIDRNIPSQVT--I 454
           ++ +  NV    V+CG  HT  +   G+++ W  G +  G LG G      IP +++  +
Sbjct: 201 ESLAACNV--DFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGAL 258

Query: 455 EGCVPRNVACGWWHTLLL 472
           +G     V+CG WHT L+
Sbjct: 259 DGLPVAYVSCGTWHTALI 276



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 89/204 (43%), Gaps = 40/204 (19%)

Query: 204 GDENLSAFPCLVTLNP--GVRIATVAAGGRHTLALSDI-----------GQVWGWGYGGE 250
           G  NL++  C   +    G++   VA G  HT A+ ++           G+++ WG G +
Sbjct: 294 GHGNLTSISCPKEVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDK 353

Query: 251 GQLGLG---SRIR-------------MVSSPHPIPCIESSYGKDRSAALS----RGSVNS 290
            +LG G   SR++              V+  H +    ++ GK  S   S     G+ NS
Sbjct: 354 HRLGHGDKESRLKPTCVASLIDYDFYRVACGHSLTVCLTTSGKVLSMGNSVYGQLGNPNS 413

Query: 291 EG--PGF---RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNC 345
           +G  P     R+ G +V  +ACG  H AV+T    + T+G G  G+ G G  +D   P  
Sbjct: 414 DGRLPCLVEDRIAGEHVLQVACGSYHVAVLTGRSEVFTWGKGANGRLGHGDIEDRKVPTQ 473

Query: 346 VSSLLGIQIEGVAAGLWHT--ICI 367
           V +L    +  +A G   T  IC+
Sbjct: 474 VEALKDRAVRHIACGANFTAAICL 497


>gi|397587793|gb|EJK54033.1| hypothetical protein THAOC_26418 [Thalassiosira oceanica]
          Length = 626

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 80/281 (28%), Positives = 123/281 (43%), Gaps = 58/281 (20%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM-VSSPHPIPCIESSYGKDR 279
           V  +TV +G +H   ++  GQ + +G G  G+LG G  +   V SP P+P          
Sbjct: 281 VVASTVTSGEKHACVIARDGQAFTFGLGANGRLGQGMGVEENVYSPKPLP---------- 330

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDD 339
                           RVP   V+ +ACG  H+ + T      +FG G  G+ G G   D
Sbjct: 331 ---------------VRVPNRIVRMVACGAEHTLICTQQ-ETYSFGCGDGGRLGHGDLAD 374

Query: 340 ELSPNCVSSLLGIQIEGVAAGLWHTICI------SSDGDVYAFGGNQFGQLGTGGDQAET 393
           +  P  ++   G  +  V+AG WH+  +       + G +Y FG    GQLG G     +
Sbjct: 375 KFEPCEITFFRGKHVLDVSAGTWHSAVVVHIPPLDNSGWLYTFGNGYQGQLGLGEICHSS 434

Query: 394 LPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT 453
            P L++    + +  K V CG+ H A +A DG ++ WG NK+G LG      RNI S+ +
Sbjct: 435 SPALVEEFFDQGLSVKRVVCGSHHNAAVAQDGNLYSWGSNKHGALG------RNITSESS 488

Query: 454 IE-----GCV--------------PRNVACGWWHTLLLAVP 475
            +     G V              P ++ACG  +T++   P
Sbjct: 489 QQFTPRPGIVSEFGSMINRIGRGKPMSIACGREYTIVATHP 529



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 92/351 (26%), Positives = 134/351 (38%), Gaps = 53/351 (15%)

Query: 150 RQSSFLTEQVSPRS----QVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGD 205
           RQS+  TE VSP       +  +       T  R +    +K R    A +   S     
Sbjct: 36  RQSAMSTESVSPSKPSIGSIHSAVSALRRATPKRETKTPNAKLRSAVNALRITTSHDQRW 95

Query: 206 ENLSAFPCLVTL----NPGVRIATVAAG-------GRHTLALSDIGQVWGWGYGGEGQLG 254
            +     CL  L    N  +R    A G        +    L + G V+  G    GQLG
Sbjct: 96  GDFDVLSCLQELQHLSNEKLRKHLQARGEEWEEGSNKKRTDLEERGAVYSTGKNNLGQLG 155

Query: 255 LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAV 314
           LG  +    +   +P         R   +   S +++G  F          A   RH   
Sbjct: 156 LGD-LEDRCAFEVVPAT-------RGRCILHISTSNDGITF----------ATAKRHDVY 197

Query: 315 ITDAGALLTFGWGLYGQCGQGSTDDE----LSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
           +   G   T   G  G C      DE     +P  V+ L G +I   A G  H   IS  
Sbjct: 198 VWGGGGRWT---GPTGLCTSLPRTDEEEGFTTPQIVAKLNGEEITETAVGSSHACAISKG 254

Query: 371 GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
           GD++ +G   +G    G  Q E  P+ + A    +V + +V+ G +H  VIA DG+ F +
Sbjct: 255 GDLFVWG---WGAAERGMLQRE--PKYVGA----SVVASTVTSGEKHACVIARDGQAFTF 305

Query: 431 GWNKYGQLGLGDVIDRNI----PSQVTIEGCVPRNVACGWWHTLLLAVPPT 477
           G    G+LG G  ++ N+    P  V +   + R VACG  HTL+     T
Sbjct: 306 GLGANGRLGQGMGVEENVYSPKPLPVRVPNRIVRMVACGAEHTLICTQQET 356



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 71/298 (23%), Positives = 116/298 (38%), Gaps = 67/298 (22%)

Query: 100 IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQV 159
           I + A G +H  A+++GG+++ WGW                   ++ + +R+  ++   V
Sbjct: 238 ITETAVGSSHACAISKGGDLFVWGW----------------GAAERGMLQREPKYVGASV 281

Query: 160 SPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLV 215
              +  S          DG+    G G  G   + + +           +EN+ +   L 
Sbjct: 282 VASTVTSGEKHACVIARDGQAFTFGLGANGRLGQGMGV-----------EENVYSPKPLP 330

Query: 216 TLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSY 275
              P   +  VA G  HTL  +   + + +G G  G+LG G            PC     
Sbjct: 331 VRVPNRIVRMVACGAEHTLICTQ-QETYSFGCGDGGRLGHGDLADKFE-----PC----- 379

Query: 276 GKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVIT------DAGALLTFGWGLY 329
                          E   FR  G +V  ++ G  HSAV+       ++G L TFG G  
Sbjct: 380 ---------------EITFFR--GKHVLDVSAGTWHSAVVVHIPPLDNSGWLYTFGNGYQ 422

Query: 330 GQCGQGSTDDELSPNCVSSLL--GIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLG 385
           GQ G G      SP  V      G+ ++ V  G  H   ++ DG++Y++G N+ G LG
Sbjct: 423 GQLGLGEICHSSSPALVEEFFDQGLSVKRVVCGSHHNAAVAQDGNLYSWGSNKHGALG 480


>gi|403263569|ref|XP_003924096.1| PREDICTED: uncharacterized protein LOC101049856 [Saimiri
           boliviensis boliviensis]
          Length = 1170

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 60/170 (35%), Positives = 93/170 (54%), Gaps = 2/170 (1%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           ++CG  HSAV+T    L  FG   +GQ G GS      P CV +L   +++  A G  HT
Sbjct: 40  LSCGDEHSAVVTGNNKLYVFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHT 99

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           +  +  G+VYA GGN  GQLG G  +  T   L+   + ++   K +S G+  +A + +D
Sbjct: 100 LVSTEGGNVYATGGNDEGQLGLGDTEERTTFHLISFFTPQH-KIKQLSAGSNTSAALTED 158

Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAV 474
           G++F WG N  GQ+GL D+ +  +P QVT  G     ++CG++H+  +  
Sbjct: 159 GRLFMWGDNSEGQIGLPDMPNACVPHQVTT-GKPVSWISCGYYHSAFVTT 207



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 39/295 (13%)

Query: 213 CLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR--------IRMVSS 264
           C+  L P  ++   A G  HTL  ++ G V+  G   EGQLGLG          I   + 
Sbjct: 80  CVKALKP-EKVKLAACGRNHTLVSTEGGNVYATGGNDEGQLGLGDTEERTTFHLISFFTP 138

Query: 265 PHPIPCIESSYGKDRSAALSRGSV------NSEG-------PGFRVPGNYVKG-----IA 306
            H I  +  S G + SAAL+          NSEG       P   VP     G     I+
Sbjct: 139 QHKIKQL--SAGSNTSAALTEDGRLFMWGDNSEGQIGLPDMPNACVPHQVTTGKPVSWIS 196

Query: 307 CGGRHSAVITDAGALLTFGWGLYGQCG--QGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           CG  HSA +T  G L  FG    G+ G       +   P  V  +    I+ VA G  H+
Sbjct: 197 CGYYHSAFVTTDGELYIFGEPENGKLGLPYELLSNHRIPQLVPEIPEKVIQ-VACGGEHS 255

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAET-LPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
           + + ++ D+Y FG  +FGQLG G    ET  PR+++  S++      +SCG  H A++ D
Sbjct: 256 VVL-TENDLYTFGLGKFGQLGLGTFLFETSEPRVVE--SIKGRKISYISCGENHAALLTD 312

Query: 424 DGKVFCWGWNKYGQLG--LGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLAVP 475
            G ++ +G  ++G+LG  L +  ++ IP   + +     + VACG  H ++ A P
Sbjct: 313 TGLMYTFGDGRHGKLGLELENFTNQFIPILCSYLLKYKVKLVACGGCHMVVFAAP 367



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 98/374 (26%), Positives = 153/374 (40%), Gaps = 81/374 (21%)

Query: 103 AAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPR 162
           AA G  H +  TEGG VY  G       G   G L  G     D  ER +  L    +P+
Sbjct: 92  AACGRNHTLVSTEGGNVYATG-------GNDEGQLGLG-----DTEERTTFHLISFFTPQ 139

Query: 163 SQVSRSSGGTSSGT----DGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCL 214
            ++ + S G+++      DGR    G   EG    +I L           D   +  P  
Sbjct: 140 HKIKQLSAGSNTSAALTEDGRLFMWGDNSEG----QIGLP----------DMPNACVPHQ 185

Query: 215 VTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESS 274
           VT   G  ++ ++ G  H+  ++  G+++ +G    G+LGL   +    S H IP +   
Sbjct: 186 VTT--GKPVSWISCGYYHSAFVTTDGELYIFGEPENGKLGLPYELL---SNHRIPQLVPE 240

Query: 275 YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
                                 +P   ++ +ACGG HS V+T+   L TFG G +GQ G 
Sbjct: 241 ----------------------IPEKVIQ-VACGGEHSVVLTE-NDLYTFGLGKFGQLGL 276

Query: 335 GSTDDELS-PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ--A 391
           G+   E S P  V S+ G +I  ++ G  H   ++  G +Y FG  + G+LG   +    
Sbjct: 277 GTFLFETSEPRVVESIKGRKISYISCGENHAALLTDTGLMYTFGDGRHGKLGLELENFTN 336

Query: 392 ETLPRLLDAPSLENVHSKSVSCGARHTAVIA-------------DDGKVFCWGWNKYGQL 438
           + +P L     L     K V+CG  H  V A             D+    C  +   G L
Sbjct: 337 QFIPILCSY--LLKYKVKLVACGGCHMVVFAAPRLRRKAEEIELDEINDTCLSFLPLGNL 394

Query: 439 GLGDVIDRNIPSQV 452
             G+V+ R + +++
Sbjct: 395 TSGNVLQRTVSARM 408



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/279 (23%), Positives = 127/279 (45%), Gaps = 38/279 (13%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
           ++ G  H+  ++   +++ +G    GQLGLGS+   VS P  +  ++    K  +   + 
Sbjct: 40  LSCGDEHSAVVTGNNKLYVFGSNNWGQLGLGSK-SAVSKPTCVKALKPEKVKLAACGRNH 98

Query: 286 GSVNSEG---------------------------PGFRVPGNYVKGIACGGRHSAVITDA 318
             V++EG                             F  P + +K ++ G   SA +T+ 
Sbjct: 99  TLVSTEGGNVYATGGNDEGQLGLGDTEERTTFHLISFFTPQHKIKQLSAGSNTSAALTED 158

Query: 319 GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           G L  +G    GQ G     +   P+ V++  G  +  ++ G +H+  +++DG++Y FG 
Sbjct: 159 GRLFMWGDNSEGQIGLPDMPNACVPHQVTT--GKPVSWISCGYYHSAFVTTDGELYIFGE 216

Query: 379 NQFGQLGTGGD--QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYG 436
            + G+LG   +      +P+L+     + +    V+CG  H+ V+ ++  ++ +G  K+G
Sbjct: 217 PENGKLGLPYELLSNHRIPQLVPEIPEKVIQ---VACGGEHSVVLTEND-LYTFGLGKFG 272

Query: 437 QLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLA 473
           QLGLG  +      +V  +I+G     ++CG  H  LL 
Sbjct: 273 QLGLGTFLFETSEPRVVESIKGRKISYISCGENHAALLT 311


>gi|444729790|gb|ELW70194.1| putative E3 ubiquitin-protein ligase HERC6 [Tupaia chinensis]
          Length = 1378

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 67/182 (36%), Positives = 94/182 (51%), Gaps = 28/182 (15%)

Query: 212  PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
            P +V    GV +  ++AG  H++ALS  G V+ WG    GQLGLG               
Sbjct: 938  PQIVEHLAGVPLVQISAGEAHSMALSMTGNVYSWGKNDFGQLGLGH-------------- 983

Query: 272  ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
              +  KD  + L   +++S+   F         +ACGG H+A++T  G + TFG G YGQ
Sbjct: 984  --TESKDSPSLLR--ALDSQKVDF---------LACGGSHTALLTQDGLVFTFGAGKYGQ 1030

Query: 332  CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFGGNQFGQLGTGGDQ 390
             G  ST DEL P  V+ LLG ++  +A G WHT+  +S  G V+AFG  + GQLG  G  
Sbjct: 1031 LGHSSTRDELRPCLVTELLGNRVTQIACGRWHTLAYVSELGKVFAFGSGKNGQLGNCGTH 1090

Query: 391  AE 392
             +
Sbjct: 1091 NQ 1092



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/271 (30%), Positives = 124/271 (45%), Gaps = 37/271 (13%)

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           SS  E + AF  L       R+  V+ G  H+LA+   G+V+ WG G EGQLG+G     
Sbjct: 85  SSKPEQIQAFETL-------RVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKER 137

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
             +P  I  +                           G  +  ++CG  HS  +++ G +
Sbjct: 138 SFTPQKIKAL--------------------------AGIKIIQVSCGYYHSLALSEDGQV 171

Query: 322 LTFGWGLYGQCGQGS-TDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
            ++G   +GQ G G     + SP  V SL GI +  VAAG  H+  +S  G  + +G N 
Sbjct: 172 FSWGKNSHGQLGLGKEVPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNS 231

Query: 381 FGQLGTGGDQAETLP-RLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG 439
            GQL   G +A     + L   +L+ +    +SCG+ HTAV+  +G V+ +G N  GQLG
Sbjct: 232 AGQLALSGTKAPVQRYKPLSVGALKTLGVVYISCGSEHTAVLTQNGAVYTFGANSSGQLG 291

Query: 440 LGDVIDRNIPSQVTIEGCVPRNVACGWWHTL 470
                 R       I+G V + + CG +HTL
Sbjct: 292 -HSAEQRGPQCVERIDGLVSQ-IDCGSYHTL 320



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 59/154 (38%), Positives = 84/154 (54%), Gaps = 4/154 (2%)

Query: 319  GALLTFGWGLYGQCGQGST-DDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
            G L  +G   +GQ G G       +P  V  L G+ +  ++AG  H++ +S  G+VY++G
Sbjct: 913  GELFAWGQNSHGQLGLGRIFPSSPTPQIVEHLAGVPLVQISAGEAHSMALSMTGNVYSWG 972

Query: 378  GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQ 437
             N FGQLG G  +++  P LL A  L++     ++CG  HTA++  DG VF +G  KYGQ
Sbjct: 973  KNDFGQLGLGHTESKDSPSLLRA--LDSQKVDFLACGGSHTALLTQDGLVFTFGAGKYGQ 1030

Query: 438  LGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
            LG     D   P  VT + G     +ACG WHTL
Sbjct: 1031 LGHSSTRDELRPCLVTELLGNRVTQIACGRWHTL 1064



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/214 (31%), Positives = 103/214 (48%), Gaps = 34/214 (15%)

Query: 232  HTLALSD-----IGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRG 286
            H L L +      G+++ WG    GQLGLG RI   SSP P   +E   G          
Sbjct: 900  HKLKLDEKKKFLCGELFAWGQNSHGQLGLG-RI-FPSSPTP-QIVEHLAG---------- 946

Query: 287  SVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCV 346
                      VP   +  I+ G  HS  ++  G + ++G   +GQ G G T+ + SP+ +
Sbjct: 947  ----------VP---LVQISAGEAHSMALSMTGNVYSWGKNDFGQLGLGHTESKDSPSLL 993

Query: 347  SSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENV 406
             +L   +++ +A G  HT  ++ DG V+ FG  ++GQLG    + E  P L+    L   
Sbjct: 994  RALDSQKVDFLACGGSHTALLTQDGLVFTFGAGKYGQLGHSSTRDELRPCLVT--ELLGN 1051

Query: 407  HSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLG 439
                ++CG  HT A +++ GKVF +G  K GQLG
Sbjct: 1052 RVTQIACGRWHTLAYVSELGKVFAFGSGKNGQLG 1085



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 56/177 (31%), Positives = 90/177 (50%), Gaps = 8/177 (4%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE-LSPNCVSSLLGIQIEGVAAG 360
           V  ++CG  HS  +   G +  +G G  GQ G G   +   +P  + +L GI+I  V+ G
Sbjct: 99  VDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKERSFTPQKIKALAGIKIIQVSCG 158

Query: 361 LWHTICISSDGDVYAFGGNQFGQLGTGGD-QAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            +H++ +S DG V+++G N  GQLG G +  ++T P+ +   SLE +    V+ G  H+ 
Sbjct: 159 YYHSLALSEDGQVFSWGKNSHGQLGLGKEVPSQTSPQRVR--SLEGIPLAQVAAGGAHSF 216

Query: 420 VIADDGKVFCWGWNKYGQLGLGDV---IDRNIPSQV-TIEGCVPRNVACGWWHTLLL 472
            ++  G  F WG N  GQL L      + R  P  V  ++      ++CG  HT +L
Sbjct: 217 ALSLSGTSFGWGSNSAGQLALSGTKAPVQRYKPLSVGALKTLGVVYISCGSEHTAVL 273



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 61/188 (32%), Positives = 88/188 (46%), Gaps = 33/188 (17%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHP------IPCIES 273
           G++I  V+ G  H+LALS+ GQV+ WG    GQLGLG  +   +SP        IP  + 
Sbjct: 149 GIKIIQVSCGYYHSLALSEDGQVFSWGKNSHGQLGLGKEVPSQTSPQRVRSLEGIPLAQV 208

Query: 274 SYGKDRSAALSRGSV------NSEGP----GFRVPGNYVK-------------GIACGGR 310
           + G   S ALS          NS G     G + P    K              I+CG  
Sbjct: 209 AAGGAHSFALSLSGTSFGWGSNSAGQLALSGTKAPVQRYKPLSVGALKTLGVVYISCGSE 268

Query: 311 HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISS 369
           H+AV+T  GA+ TFG    GQ G  +  ++  P CV  + G+ +  +  G +HT+  + +
Sbjct: 269 HTAVLTQNGAVYTFGANSSGQLGHSA--EQRGPQCVERIDGL-VSQIDCGSYHTLAYVYT 325

Query: 370 DGDVYAFG 377
            G V +FG
Sbjct: 326 TGQVVSFG 333



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 74/140 (52%), Gaps = 13/140 (9%)

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL-PRLLDA 400
            P  + +   ++++ V+ G  H++ +   G V+A+G    GQLG G  +  +  P+ + A
Sbjct: 87  KPEQIQAFETLRVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKERSFTPQKIKA 146

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV------TI 454
             L  +    VSCG  H+  +++DG+VF WG N +GQLGLG    + +PSQ       ++
Sbjct: 147 --LAGIKIIQVSCGYYHSLALSEDGQVFSWGKNSHGQLGLG----KEVPSQTSPQRVRSL 200

Query: 455 EGCVPRNVACGWWHTLLLAV 474
           EG     VA G  H+  L++
Sbjct: 201 EGIPLAQVAAGGAHSFALSL 220



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 51/163 (31%), Positives = 76/163 (46%), Gaps = 34/163 (20%)

Query: 100  IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQV 159
            +V+ +AG AH +A++  G VY+WG  +       FG L  G    KD     S  L   +
Sbjct: 949  LVQISAGEAHSMALSMTGNVYSWGKND-------FGQLGLGHTESKD-----SPSLLRAL 996

Query: 160  SPRSQVSRSSGGTSSG---TDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFP 212
              +     + GG+ +     DG     G+G+ G          Q   SS+  +      P
Sbjct: 997  DSQKVDFLACGGSHTALLTQDGLVFTFGAGKYG----------QLGHSSTRDELR----P 1042

Query: 213  CLVTLNPGVRIATVAAGGRHTLA-LSDIGQVWGWGYGGEGQLG 254
            CLVT   G R+  +A G  HTLA +S++G+V+ +G G  GQLG
Sbjct: 1043 CLVTELLGNRVTQIACGRWHTLAYVSELGKVFAFGSGKNGQLG 1085



 Score = 40.8 bits (94), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 78/330 (23%), Positives = 130/330 (39%), Gaps = 72/330 (21%)

Query: 48  DVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEI-PEPFPLPTEASIVKAAAG 106
           D+   G   ++A+    ++  WG+  + GQ  +   K     P+         I++ + G
Sbjct: 100 DLVSCGKEHSLAVCHKGRVFAWGAGSE-GQLGIGEFKERSFTPQKIKALAGIKIIQVSCG 158

Query: 107 WAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS--PRSQ 164
           + H +A++E G+V++WG           G L    GL K+V  + S      +   P +Q
Sbjct: 159 YYHSLALSEDGQVFSWG-------KNSHGQL----GLGKEVPSQTSPQRVRSLEGIPLAQ 207

Query: 165 V----SRSSGGTSSGTD-GRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
           V    + S   + SGT  G GS   G    +++L+   A        ++ A   L     
Sbjct: 208 VAAGGAHSFALSLSGTSFGWGSNSAG----QLALSGTKAPVQRYKPLSVGALKTL----- 258

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
              +  ++ G  HT  L+  G V+ +G    GQLG  +  R    P    C+E       
Sbjct: 259 --GVVYISCGSEHTAVLTQNGAVYTFGANSSGQLGHSAEQR---GPQ---CVE------- 303

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHS-AVITDAGALLTFGWGLYGQCGQGSTD 338
                           R+ G  V  I CG  H+ A +   G +++FG G    C   ST 
Sbjct: 304 ----------------RIDG-LVSQIDCGSYHTLAYVYTTGQVVSFGHG--PSCTSNSTH 344

Query: 339 -----DELSPNCVSS---LLGIQIEGVAAG 360
                D    +C+ S   L+ IQ++ + AG
Sbjct: 345 SETVTDNADISCLISADDLVDIQVKHIFAG 374


>gi|426395581|ref|XP_004064049.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Gorilla gorilla gorilla]
          Length = 225

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 60/169 (35%), Positives = 93/169 (55%), Gaps = 2/169 (1%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           ++CG  HSAV+T    L  FG   +GQ G GS      P CV +L   +++  A G  HT
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHT 99

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           +  +  G+VYA GGN  GQLG G  +      ++   + E+   K +S G+  +A + +D
Sbjct: 100 LVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEH-KIKQLSAGSNTSAALTED 158

Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           G++F WG N  GQ+GL +V +  +P QVTI G     ++CG++H+  + 
Sbjct: 159 GRLFMWGDNSEGQIGLKNVTNVCVPQQVTI-GKPVSCISCGYYHSAFVT 206



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 47/200 (23%), Positives = 86/200 (43%), Gaps = 36/200 (18%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
           ++ G  H+  ++   +++ +G    GQLGLGS+   VS P    C+++            
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSK-SAVSKP---TCVKA------------ 83

Query: 286 GSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNC 345
                      +    VK  ACG  H+ V T+ G +   G    GQ G G T++  + + 
Sbjct: 84  -----------LKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHV 132

Query: 346 VSSLLG-IQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPR--LLDAPS 402
           +S      +I+ ++AG   +  ++ DG ++ +G N  GQ+G        +P+   +  P 
Sbjct: 133 ISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVTNVCVPQQVTIGKP- 191

Query: 403 LENVHSKSVSCGARHTAVIA 422
                   +SCG  H+A + 
Sbjct: 192 -----VSCISCGYYHSAFVT 206



 Score = 42.7 bits (99), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 54/130 (41%), Gaps = 29/130 (22%)

Query: 213 CLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR--------IRMVSS 264
           C+  L P  ++   A G  HTL  ++ G V+  G   EGQLGLG          I   +S
Sbjct: 80  CVKALKPE-KVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTS 138

Query: 265 PHPIPCIESSYGKDRSAALSRGSV------NSEG------------PGFRVPGNYVKGIA 306
            H I   + S G + SAAL+          NSEG            P     G  V  I+
Sbjct: 139 EHKIK--QLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVTNVCVPQQVTIGKPVSCIS 196

Query: 307 CGGRHSAVIT 316
           CG  HSA +T
Sbjct: 197 CGYYHSAFVT 206


>gi|167518173|ref|XP_001743427.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778526|gb|EDQ92141.1| predicted protein [Monosiga brevicollis MX1]
          Length = 1024

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 108/359 (30%), Positives = 154/359 (42%), Gaps = 72/359 (20%)

Query: 103 AAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPR 162
           AAAG  H + VT  G VY+ G  +    GR     S   G    +F+R  +    +V+  
Sbjct: 37  AAAGAYHSLLVTTDGLVYSAGKNDHRQLGR-----SGPAG----IFKRIEAI---EVASI 84

Query: 163 SQVSRSSGGTSSGTDGRG------SGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVT 216
            QV+ +    S   D RG      +GE G    ++   +QT+E            P ++ 
Sbjct: 85  RQVA-AGEDFSLMLDDRGKVYAVGAGERG----QLGCGRQTSEEGHR-------VPKIIR 132

Query: 217 LNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYG 276
               V I  ++ GGRH LALS    V+ WG    GQLG G     V S  P P  E    
Sbjct: 133 SLHDVPIVALSVGGRHALALSASSIVFAWGENANGQLGNG---HFVPSYQPTPIPE---- 185

Query: 277 KDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGS 336
                      +N  G         V G+A G +HS  +T A  L  FG   +GQ G G 
Sbjct: 186 -----------LNGRG---------VVGLAAGRQHSLALTAASELYAFGANEHGQLGVGD 225

Query: 337 TDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD-QAETLP 395
           T   L P  V + L   +  V+AG +H++  S+ G  +A+GGNQ+GQ G G D  A  LP
Sbjct: 226 TKPRLRPELVRAALRKGLVKVSAGDFHSLARSATGHAFAWGGNQWGQCGVGDDADAILLP 285

Query: 396 RLLDAPSLENVHSKSVSCGARHTAVIA-------------DDGKVFCWGWNKYGQLGLG 441
           R +D+   E+ H   ++ G RH+ ++                  +F +G N   QLG+ 
Sbjct: 286 REIDSVQ-EHGHIADIATGKRHSVLLVVTSNQTTPTPSTFHKQLLFTFGANSLAQLGVA 343



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 8/175 (4%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           ++  A G  HS ++T  G + + G   + Q G+           + ++    I  VAAG 
Sbjct: 34  LRAAAAGAYHSLLVTTDGLVYSAGKNDHRQLGRSGPAGIF--KRIEAIEVASIRQVAAGE 91

Query: 362 WHTICISSDGDVYAFGGNQFGQLGTGGDQAET---LPRLLDAPSLENVHSKSVSCGARHT 418
             ++ +   G VYA G  + GQLG G   +E    +P+++   SL +V   ++S G RH 
Sbjct: 92  DFSLMLDDRGKVYAVGAGERGQLGCGRQTSEEGHRVPKIIR--SLHDVPIVALSVGGRHA 149

Query: 419 AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLL 472
             ++    VF WG N  GQLG G  +    P+ +  + G     +A G  H+L L
Sbjct: 150 LALSASSIVFAWGENANGQLGNGHFVPSYQPTPIPELNGRGVVGLAAGRQHSLAL 204


>gi|55725019|emb|CAH89377.1| hypothetical protein [Pongo abelii]
          Length = 451

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 70/203 (34%), Positives = 110/203 (54%), Gaps = 7/203 (3%)

Query: 276 GKDRSAALSRGSVNSEGPGFRVPGNYVKGIAC----GGRHSAVITDAGALLTFGWGLYGQ 331
           G +    L  G V S     R+     K IAC     G H  + T  G + T+G   Y Q
Sbjct: 76  GTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQ 135

Query: 332 CGQGSTDDELSPNCVSS-LLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            G G+T+  L P  +S+ L   Q+  VA G +H++ ++SDG+V+A+G N  GQ+G+G   
Sbjct: 136 LGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTV 195

Query: 391 AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
            + +PR +    L+N    +++CG      + D G+V+ WG+N  GQLGLG+  ++  P 
Sbjct: 196 NQPIPRRVTG-CLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPC 254

Query: 451 QVT-IEGCVPRNVACGWWHTLLL 472
           +V  ++G   + VACG+ HTL+L
Sbjct: 255 RVAALQGIRVQRVACGYAHTLVL 277



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 123/244 (50%), Gaps = 31/244 (12%)

Query: 214 LVTLNPGVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIE 272
           L +LN G +IA ++ G G H +  +  G+V+ WG+    QLG G+     ++   +PC  
Sbjct: 97  LDSLN-GKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT-----TNHGLVPCHI 150

Query: 273 SSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQC 332
           S+   ++                      V  +ACG  HS V+T  G +  +G+   GQ 
Sbjct: 151 STNLSNKQ---------------------VIEVACGSYHSLVLTSDGEVFAWGYNNSGQV 189

Query: 333 GQGSTDDELSPNCVSSLLGIQIE-GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
           G GST ++  P  V+  L  ++   +A G    + +   G+VY +G N  GQLG G    
Sbjct: 190 GSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGN 249

Query: 392 ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
           +  P  + A  L+ +  + V+CG  HT V+ D+G+V+ WG N YGQLG G+  +++ P+ 
Sbjct: 250 QPTPCRVAA--LQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 307

Query: 452 VTIE 455
           VT+E
Sbjct: 308 VTVE 311



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 109/231 (47%), Gaps = 30/231 (12%)

Query: 203 SGDENLSAFPCLVTLN-PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +G  N    PC ++ N    ++  VA G  H+L L+  G+V+ WGY   GQ+G GS +  
Sbjct: 138 NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVN- 196

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
                PIP         R     +  V             V  IACG      + D G +
Sbjct: 197 ----QPIP--------RRVTGCLQNKV-------------VVTIACGQMCCMAVVDTGEV 231

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             +G+   GQ G G++ ++ +P  V++L GI+++ VA G  HT+ ++ +G VYA+G N +
Sbjct: 232 YVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSY 291

Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           GQLGTG    ++ P  +       +  +  +C + HT A     G V+ WG
Sbjct: 292 GQLGTGNKSNQSYPTPVTVEKDRII--EIAACHSTHTSAAKTQGGHVYMWG 340



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 56/115 (48%), Gaps = 23/115 (20%)

Query: 370 DGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR----HTAVIADDG 425
           + +++  G N  G LG G  Q+   PR LD+     ++ K ++C +     H  +   +G
Sbjct: 69  NDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS-----LNGKKIACLSYGSGPHIVLATTEG 123

Query: 426 KVFCWGWNKYGQLGLGDV--------IDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           +VF WG N Y QLG G          I  N+ ++  IE      VACG +H+L+L
Sbjct: 124 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIE------VACGSYHSLVL 172



 Score = 39.7 bits (91), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 55/133 (41%), Gaps = 17/133 (12%)

Query: 14  VFMWGYL-PGALPQRSPILSPLVVRLP--LTVGSAWRDVCGGGCGFAMAISDSRKLITWG 70
           VF WGY   G +   S +  P+  R+   L         CG  C   MA+ D+ ++  WG
Sbjct: 178 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMC--CMAVVDTGEVYVWG 235

Query: 71  STDDLGQSYVTSGKHGEIPEPFPLPTEASI--VKAAAGWAHCVAVTEGGEVYTWGWKECV 128
                G   +  G  G  P P  +     I   + A G+AH + +T+ G+VY WG     
Sbjct: 236 YN---GNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG----- 287

Query: 129 PSGRVFGDLSTGT 141
                +G L TG 
Sbjct: 288 --ANSYGQLGTGN 298


>gi|356508920|ref|XP_003523201.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 417

 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 134/287 (46%), Gaps = 46/287 (16%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI-----PCIESSYGK 277
           +  +A GG HTL L++ G V+  G    GQLG+         P  +       ++ S G 
Sbjct: 67  LNAIACGGAHTLFLTEDGCVYATGLNDFGQLGVSESKHYSVEPLCVFGEEKKVVQISAGY 126

Query: 278 DRSAALS---------RGSVNSEGPGFRVPG--------NYVKGI-----ACGGRHSAVI 315
           + S A++         + +    G G R P          Y+KGI     A G  HS  I
Sbjct: 127 NHSCAITVDGELYMWGKNTSGQLGLGKRAPNIVPLPTKVEYLKGINIKMAALGSEHSVAI 186

Query: 316 TDAGALLTFGWGLYGQCGQG---------STDDELSPNCVSSLLGIQIEGVAAGLWHTIC 366
           +D GA  ++G G+ G+ G G          +  E +P  +  L GI+++ VAAGL ++ C
Sbjct: 187 SDGGAAFSWGIGVSGRLGHGHESSVLGFFKSYSEYTPRLIKDLEGIKVKYVAAGLLNSAC 246

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL-DAPSLENVHSKSVSCGARHTAVIADDG 425
              +G V+ FG     +L        T P L+ + PS     SK V+CG  HT V+ + G
Sbjct: 247 TDENGCVFVFGERGIEKLRLKEMSDATKPSLISELPS-----SKEVACGGYHTCVLTNSG 301

Query: 426 KVFCWGWNKYGQLGLGDVIDRNIPSQVT---IEGCVPRNVACGWWHT 469
           +++ WG N+ G LG+G     ++P +V    ++  V + V+CGW HT
Sbjct: 302 ELYTWGSNENGCLGIGSSDVIHLPEKVQGPFLKSSVSQ-VSCGWKHT 347



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 83/276 (30%), Positives = 124/276 (44%), Gaps = 35/276 (12%)

Query: 207 NLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPH 266
           N+   P  V    G+ I   A G  H++A+SD G  + WG G  G+LG G    ++    
Sbjct: 157 NIVPLPTKVEYLKGINIKMAALGSEHSVAISDGGAAFSWGIGVSGRLGHGHESSVL---- 212

Query: 267 PIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGW 326
                   + K  S    R   + EG         VK +A G  +SA   + G +  FG 
Sbjct: 213 -------GFFKSYSEYTPRLIKDLEGIK-------VKYVAAGLLNSACTDENGCVFVFGE 258

Query: 327 GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
               +       D   P+ +S L     + VA G +HT  +++ G++Y +G N+ G LG 
Sbjct: 259 RGIEKLRLKEMSDATKPSLISEL--PSSKEVACGGYHTCVLTNSGELYTWGSNENGCLGI 316

Query: 387 GGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGW------------NK 434
           G      LP  +  P L++  S+ VSCG +HTA I+ +G+VF WGW            + 
Sbjct: 317 GSSDVIHLPEKVQGPFLKSSVSQ-VSCGWKHTAAIS-EGRVFTWGWGGSNGTFSEVGHSS 374

Query: 435 YGQLGLGDVIDRNIPSQVTI-EGCVPRNVACGWWHT 469
            GQLG G  +D   P++V   E      V+CG+ HT
Sbjct: 375 SGQLGHGSDVDYINPTRVCFGEDVKALQVSCGFNHT 410



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 88/198 (44%), Gaps = 29/198 (14%)

Query: 245 WGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKG 304
           WG G  G+LGLG+   + S   P+ C                      P FR     +  
Sbjct: 37  WGNGDYGRLGLGN---LDSQWKPVVC----------------------PAFR--NKTLNA 69

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCG-QGSTDDELSPNCVSSLLGIQIEGVAAGLWH 363
           IACGG H+  +T+ G +   G   +GQ G   S    + P CV       ++ ++AG  H
Sbjct: 70  IACGGAHTLFLTEDGCVYATGLNDFGQLGVSESKHYSVEPLCVFGEEKKVVQ-ISAGYNH 128

Query: 364 TICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
           +  I+ DG++Y +G N  GQLG G      +P       L+ ++ K  + G+ H+  I+D
Sbjct: 129 SCAITVDGELYMWGKNTSGQLGLGKRAPNIVPLPTKVEYLKGINIKMAALGSEHSVAISD 188

Query: 424 DGKVFCWGWNKYGQLGLG 441
            G  F WG    G+LG G
Sbjct: 189 GGAAFSWGIGVSGRLGHG 206



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 102/376 (27%), Positives = 152/376 (40%), Gaps = 77/376 (20%)

Query: 73  DDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGR 132
           +D GQ  V+  KH  +        E  +V+ +AG+ H  A+T  GE+Y WG      SG+
Sbjct: 92  NDFGQLGVSESKHYSVEPLCVFGEEKKVVQISAGYNHSCAITVDGELYMWGKN---TSGQ 148

Query: 133 V--------FGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSS----GTDGR- 179
           +           L T     K +  + ++  +E       V+ S GG +     G  GR 
Sbjct: 149 LGLGKRAPNIVPLPTKVEYLKGINIKMAALGSEH-----SVAISDGGAAFSWGIGVSGRL 203

Query: 180 GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDI 239
           G G E S    +   K  +E +          P L+    G+++  VAAG  ++    + 
Sbjct: 204 GHGHESS---VLGFFKSYSEYT----------PRLIKDLEGIKVKYVAAGLLNSACTDEN 250

Query: 240 GQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPG 299
           G V+ +G  G  +L L                     K+ S A ++ S+ SE P      
Sbjct: 251 GCVFVFGERGIEKLRL---------------------KEMSDA-TKPSLISELPS----- 283

Query: 300 NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS-LLGIQIEGVA 358
              K +ACGG H+ V+T++G L T+G    G  G GS+D    P  V    L   +  V+
Sbjct: 284 --SKEVACGGYHTCVLTNSGELYTWGSNENGCLGIGSSDVIHLPEKVQGPFLKSSVSQVS 341

Query: 359 AGLWHTICIS-----------SDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVH 407
            G  HT  IS           S+G     G +  GQLG G D     P  +     E+V 
Sbjct: 342 CGWKHTAAISEGRVFTWGWGGSNGTFSEVGHSSSGQLGHGSDVDYINPTRVCFG--EDVK 399

Query: 408 SKSVSCGARHTAVIAD 423
           +  VSCG  HT  I +
Sbjct: 400 ALQVSCGFNHTGAILE 415



 Score = 43.5 bits (101), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 3/99 (3%)

Query: 377 GGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYG 436
           G   +G+LG G   ++  P +   P+  N    +++CG  HT  + +DG V+  G N +G
Sbjct: 38  GNGDYGRLGLGNLDSQWKPVV--CPAFRNKTLNAIACGGAHTLFLTEDGCVYATGLNDFG 95

Query: 437 QLGLGDVIDRNI-PSQVTIEGCVPRNVACGWWHTLLLAV 474
           QLG+ +    ++ P  V  E      ++ G+ H+  + V
Sbjct: 96  QLGVSESKHYSVEPLCVFGEEKKVVQISAGYNHSCAITV 134


>gi|348563446|ref|XP_003467518.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Cavia
           porcellus]
          Length = 1050

 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 91/308 (29%), Positives = 141/308 (45%), Gaps = 51/308 (16%)

Query: 84  KHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGL 143
           + G  PE      +  I+  A G +H +A+++ G++++WG      +G   G L   T  
Sbjct: 70  REGNQPEQIGALADQHIIHVACGESHSLALSDQGQLFSWG------AGSD-GQLGLMTTE 122

Query: 144 DKDVFERQSSFLTEQVSPRSQVSRSSGG---TSSGTDGRGSGEEGSKRRRISLAKQTAES 200
           D     R    L ++++ ++ +  S G     +  TDG+      +   ++ L K+    
Sbjct: 123 DSVAVPR----LIQKLNQQTILQVSCGNWHCLALATDGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 201 SSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR 260
           +S         P  V    G+ +A VAAGG H+ ALS  G V+GWG    GQLGL     
Sbjct: 179 TS---------PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE-- 227

Query: 261 MVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA 320
                           KDR +      + ++          V  I+CG  H+AV+T +G 
Sbjct: 228 ----------------KDRESPCHVKLLRTQK---------VVYISCGEEHTAVLTKSGG 262

Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFGGN 379
           + TFG G  GQ G  S +DE++P  V  L+G ++  +A G  HT+  + S G +YAFG  
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 380 QFGQLGTG 387
             GQLGTG
Sbjct: 323 ARGQLGTG 330



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 112/251 (44%), Gaps = 30/251 (11%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
            I  VA G  H+LALSD GQ++ WG G +GQLGL +    V+ P  I             
Sbjct: 85  HIIHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ------------ 132

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDE 340
                         ++    +  ++CG  H   +   G   T+G   +GQ G G     +
Sbjct: 133 --------------KLNQQTILQVSCGNWHCLALATDGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
            SP  V SL GI +  VAAG  H+  +S  G V+ +G N  GQLG   ++    P  +  
Sbjct: 179 TSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKL 238

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVP 459
              + V    +SCG  HTAV+   G VF +G    GQLG   + D   P +V  + G   
Sbjct: 239 LRTQKV--VYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEV 296

Query: 460 RNVACGWWHTL 470
             +ACG  HTL
Sbjct: 297 TQIACGRQHTL 307



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 118/255 (46%), Gaps = 38/255 (14%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  VA GG H + L + G+V+  G   +GQLG     R  + P  I  +           
Sbjct: 36  VKEVACGGDHCVFLLEDGEVYTCGLNTKGQLG---HEREGNQPEQIGALAD--------- 83

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                             ++  +ACG  HS  ++D G L ++G G  GQ G  +T+D ++
Sbjct: 84  -----------------QHIIHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVA 126

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD-QAETLPRLLDA 400
            P  +  L    I  V+ G WH + +++DG  + +G N  GQLG G +  ++T P+    
Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALATDGQFFTWGKNSHGQLGLGKEFPSQTSPQ--RV 184

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI---EGC 457
            SLE +    V+ G  H+  ++  G VF WG N  GQLGL D  DR  P  V +   +  
Sbjct: 185 RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKV 244

Query: 458 VPRNVACGWWHTLLL 472
           V   ++CG  HT +L
Sbjct: 245 V--YISCGEEHTAVL 257



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 99/399 (24%), Positives = 159/399 (39%), Gaps = 81/399 (20%)

Query: 39  PLTVGS-AWRDVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLP 95
           P  +G+ A + +    CG   ++A+SD  +L +WG+  D     +T+     +P      
Sbjct: 75  PEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 96  TEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFL 155
            + +I++ + G  HC+A+   G+ +TWG           G L    GL K+         
Sbjct: 135 NQQTILQVSCGNWHCLALATDGQFFTWG-------KNSHGQL----GLGKE--------F 175

Query: 156 TEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLA-------KQTAESSSSGDENL 208
             Q SP  Q  RS  G        G    G+    +SL+          A      DE  
Sbjct: 176 PSQTSP--QRVRSLEGIPLAQVAAG----GAHSFALSLSGAVFGWGMNNAGQLGLSDEKD 229

Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
              PC V L    ++  ++ G  HT  L+  G V+ +G G  GQLG  S   M    +P 
Sbjct: 230 RESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDS---MNDEVNPR 286

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHS-AVITDAGALLTFGWG 327
             +E                        + G+ V  IACG +H+ A +  +G +  FG G
Sbjct: 287 RVLE------------------------LMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLG 385
             GQ G G T +   P+ V             G W  H+  +S+  D + +  +   Q+ 
Sbjct: 323 ARGQLGTGHTCNVKCPSPVK------------GYWAAHSGQLSARADRFKY--HIVKQIF 368

Query: 386 TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           +GGDQ   L    +  S   V  ++V+  A +T++I D+
Sbjct: 369 SGGDQTFVLCSKYENSS-PAVDFRTVN-QAHYTSLINDE 405



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/124 (35%), Positives = 61/124 (49%), Gaps = 10/124 (8%)

Query: 354 IEGVAAGLWHTICISSDGDVYAFGGNQFGQLG--TGGDQAETLPRLLDAPSLENVHSKSV 411
           ++ VA G  H + +  DG+VY  G N  GQLG    G+Q E +  L D       H   V
Sbjct: 36  VKEVACGGDHCVFLLEDGEVYTCGLNTKGQLGHEREGNQPEQIGALADQ------HIIHV 89

Query: 412 SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR-NIPSQV-TIEGCVPRNVACGWWHT 469
           +CG  H+  ++D G++F WG    GQLGL    D   +P  +  +       V+CG WH 
Sbjct: 90  ACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149

Query: 470 LLLA 473
           L LA
Sbjct: 150 LALA 153


>gi|89273844|emb|CAJ81935.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Xenopus (Silurana) tropicalis]
          Length = 526

 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 125/254 (49%), Gaps = 29/254 (11%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++ A V   G   L L+   +V+  G    G LG G    ++  P  I  +    GK R 
Sbjct: 21  IQQACVFGAGNEVLYLTKNDEVFVMGTNSSGCLGTGDAQSIIE-PRRIDMLS---GK-RI 75

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
            +LS GS                     G H  ++T  G + ++G   Y Q G GST+  
Sbjct: 76  VSLSYGS---------------------GPHVVIVTSDGEVYSWGHNAYSQLGNGSTNQA 114

Query: 341 LSPNCVSS-LLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLD 399
           LSP  VS+ L+  +   VA G  H++ ++ DG+VYA+G N  GQ+G+G    + +PR + 
Sbjct: 115 LSPCQVSTNLINKKAISVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVT 174

Query: 400 APSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCV 458
           +  L+N     ++CG   +  + D+G+V+ WG+N  GQLGLG   ++  P ++  ++G  
Sbjct: 175 S-CLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIR 233

Query: 459 PRNVACGWWHTLLL 472
              V CG+ HTL L
Sbjct: 234 VEQVVCGYAHTLAL 247



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 119/233 (51%), Gaps = 34/233 (14%)

Query: 203 SGDENLSAFPCLVTLN-PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +G  N +  PC V+ N    +  +VA G  H++ L+  G+V+ WGY   GQ+G GS    
Sbjct: 108 NGSTNQALSPCQVSTNLINKKAISVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGS---- 163

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
            ++  PIP   +S  ++++                     V GIACG   S  + D G +
Sbjct: 164 -TANQPIPRKVTSCLQNKT---------------------VIGIACGQMSSMAVVDNGEV 201

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             +G+   GQ G GS+ ++ +P  +++L GI++E V  G  HT+ ++ +G +YA+G N +
Sbjct: 202 YAWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSY 261

Query: 382 GQLGTGGDQAETLP--RLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           GQLGTG    ++ P   ++D   +  +     +C + HT A  +  G+V+ WG
Sbjct: 262 GQLGTGNKSNQSYPVQVIVDKERIVEI----AACHSSHTSAAKSQSGQVYMWG 310



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 82/197 (41%), Gaps = 36/197 (18%)

Query: 101 VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
           +  A G  H + +T  GEVY WG+          G + +G+  ++ +  + +S L  +  
Sbjct: 130 ISVACGSHHSMVLTCDGEVYAWGYNNS-------GQVGSGSTANQPIPRKVTSCLQNKTV 182

Query: 161 ------PRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCL 214
                   S ++    G        G+G+ G                SSG++     PC 
Sbjct: 183 IGIACGQMSSMAVVDNGEVYAWGYNGNGQLG--------------LGSSGNQ---PTPCR 225

Query: 215 VTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR------IRMVSSPHPI 268
           +    G+R+  V  G  HTLAL+D G ++ WG    GQLG G++      ++++     I
Sbjct: 226 IAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGNKSNQSYPVQVIVDKERI 285

Query: 269 PCIESSYGKDRSAALSR 285
             I + +    SAA S+
Sbjct: 286 VEIAACHSSHTSAAKSQ 302


>gi|426258035|ref|XP_004022625.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Ovis
           aries]
          Length = 1137

 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 98/304 (32%), Positives = 139/304 (45%), Gaps = 57/304 (18%)

Query: 213 CLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR--------IRMVSS 264
           C+  L P  ++  VA G  HTL L+  G+V+  G   EGQLGLG          I   +S
Sbjct: 106 CIKALKPE-KVKFVACGRNHTLVLTGGGKVYATGGNNEGQLGLGDTDERSAFHLISFFTS 164

Query: 265 PHPIPCIESSYGKDRSAALSR-GSV-----NSEG------------PGFRVPGNYVKGIA 306
            H I  +  S G + SAAL+  G +     NSEG            P     G  +  I+
Sbjct: 165 QHKIKQL--SAGSNTSAALTEDGELFMWGDNSEGQIGLQNITNMCVPHQVTVGKPISWIS 222

Query: 307 CGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSL--------LGIQIEGVA 358
           CG  HSA +T  G L TFG    G+ G       L P  + +         +  ++  VA
Sbjct: 223 CGYYHSAFVTTEGELYTFGEPESGKLG-------LPPKLLVNHKVPQLVPGISEKVIQVA 275

Query: 359 AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAET-LPRLLDAPSLENVHSKSVSCGARH 417
            G  HT+ ++    VY FG  QFGQLG G    ET  P++++  S+++     V CG  H
Sbjct: 276 CGGGHTVVLTEKA-VYTFGLGQFGQLGLGTFTFETSEPKVIE--SVKDKKISHVCCGENH 332

Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC------VPRNVACGWWHTLL 471
           TA+I + G ++ +G  ++G+LGLG     N  +Q     C      +   VACG  H L+
Sbjct: 333 TALITESGLLYTFGDGRHGKLGLG---MENFANQFLPTLCSNFLKYIVHLVACGGCHMLV 389

Query: 472 LAVP 475
            A P
Sbjct: 390 FATP 393



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 93/170 (54%), Gaps = 2/170 (1%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           ++CG  H+A+ T    L  FG   +GQ G GS      P C+ +L   +++ VA G  HT
Sbjct: 66  LSCGDEHTAITTGNNKLFMFGSNNWGQLGLGSKATVNKPTCIKALKPEKVKFVACGRNHT 125

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           + ++  G VYA GGN  GQLG G     +   L+   + ++   K +S G+  +A + +D
Sbjct: 126 LVLTGGGKVYATGGNNEGQLGLGDTDERSAFHLISFFTSQH-KIKQLSAGSNTSAALTED 184

Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAV 474
           G++F WG N  GQ+GL ++ +  +P QVT+ G     ++CG++H+  +  
Sbjct: 185 GELFMWGDNSEGQIGLQNITNMCVPHQVTV-GKPISWISCGYYHSAFVTT 233



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 74/287 (25%), Positives = 128/287 (44%), Gaps = 52/287 (18%)

Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSY------GKD 278
           +++ G  HT   +   +++ +G    GQLGLGS+   V+ P  I  ++         G++
Sbjct: 65  SLSCGDEHTAITTGNNKLFMFGSNNWGQLGLGSKA-TVNKPTCIKALKPEKVKFVACGRN 123

Query: 279 RSAALSRGSV------NSEGP---------------GFRVPGNYVKGIACGGRHSAVITD 317
            +  L+ G        N+EG                 F    + +K ++ G   SA +T+
Sbjct: 124 HTLVLTGGGKVYATGGNNEGQLGLGDTDERSAFHLISFFTSQHKIKQLSAGSNTSAALTE 183

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
            G L  +G    GQ G  +  +   P+ V+  +G  I  ++ G +H+  ++++G++Y FG
Sbjct: 184 DGELFMWGDNSEGQIGLQNITNMCVPHQVT--VGKPISWISCGYYHSAFVTTEGELYTFG 241

Query: 378 GNQFGQLGTGGDQAETLPRLL---DAPSL-----ENVHSKSVSCGARHTAVIADDGKVFC 429
             + G+LG         P+LL     P L     E V    V+CG  HT V+ +   V+ 
Sbjct: 242 EPESGKLGLP-------PKLLVNHKVPQLVPGISEKV--IQVACGGGHTVVLTEKA-VYT 291

Query: 430 WGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVA---CGWWHTLLLA 473
           +G  ++GQLGLG         +V IE    + ++   CG  HT L+ 
Sbjct: 292 FGLGQFGQLGLGTFTFETSEPKV-IESVKDKKISHVCCGENHTALIT 337



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/114 (35%), Positives = 52/114 (45%), Gaps = 25/114 (21%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL----DAPSLENVHSKSVSCGARHTAVIA 422
           I   G V+ FG  +F         AE +P       D P        S+SCG  HTA+  
Sbjct: 34  IEDSGAVFTFGKTKF---------AENIPSKFWFKKDIPI-------SLSCGDEHTAITT 77

Query: 423 DDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRN---VACGWWHTLLLA 473
            + K+F +G N +GQLGLG     N P+   I+   P     VACG  HTL+L 
Sbjct: 78  GNNKLFMFGSNNWGQLGLGSKATVNKPT--CIKALKPEKVKFVACGRNHTLVLT 129


>gi|147900291|ref|NP_001086738.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
           [Xenopus laevis]
 gi|83405253|gb|AAI10973.1| MGC81587 protein [Xenopus laevis]
          Length = 897

 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 128/273 (46%), Gaps = 38/273 (13%)

Query: 205 DENLSAFP--CLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMV 262
           DE +   P  C   +N  VR   V  G RHT  + D G V+  G    GQLG        
Sbjct: 18  DEEVVIEPRRCDFFINKNVR--DVGCGNRHTGFVLDDGTVYTCGCNDLGQLG-------- 67

Query: 263 SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL 322
                       + K R      G+++++          +  ++CG  H+  + D G + 
Sbjct: 68  ------------HDKSRKKPEQVGALDAQ---------IIVAVSCGEAHTLALNDKGQVF 106

Query: 323 TFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
           ++G   +GQ G    +D +  P  + SL  IQI  VA G  H++ +S + ++Y++G NQ+
Sbjct: 107 SWGHAAHGQIGVSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWGQNQY 166

Query: 382 GQLGTGGDQ-AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL 440
           GQLG G ++  E+ PR +   SL  +    ++ G  H+  +   G +F WG NK+GQLGL
Sbjct: 167 GQLGLGSEKRKESAPRHIK--SLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGL 224

Query: 441 GDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLL 472
            D  DR+ P+ + ++       + CG  HT  L
Sbjct: 225 NDETDRSDPALLKSLRSQKIIYICCGEDHTAAL 257



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 82/261 (31%), Positives = 125/261 (47%), Gaps = 36/261 (13%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS-----RI-RMVSSPHPIPCIESSYG 276
           I  V+ G  HTLAL+D GQV+ WG+   GQ+G+       R+ R + S   I  ++ + G
Sbjct: 86  IVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGVSIAEDYIRVPRNIKSLSDIQIVQVACG 145

Query: 277 KDRSAALSRGS--------------VNSEGPGFRVPGNYVKG--------IACGGRHSAV 314
              S ALS+ S              + SE      P  ++K         IA GG HS  
Sbjct: 146 HHHSLALSKESNIYSWGQNQYGQLGLGSEKRKESAP-RHIKSLSGIPFAHIAAGGGHSFA 204

Query: 315 ITDAGALLTFGWGL--YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGD 372
           +T +GA+  FGWG   +GQ G     D   P  + SL   +I  +  G  HT  ++ +G 
Sbjct: 205 LTISGAI--FGWGRNKFGQLGLNDETDRSDPALLKSLRSQKIIYICCGEDHTAALTKEGG 262

Query: 373 VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           V+ FG   +GQLG      E  PR +    + N+ ++ ++CG +HT A +   G+++ +G
Sbjct: 263 VFTFGAGGYGQLGHNSASHEVNPRKV-FELMGNIVTQ-IACGRQHTLAFVPSSGRIYSFG 320

Query: 432 WNKYGQLGLGDVIDRNIPSQV 452
               GQLG+G   ++  PS V
Sbjct: 321 LGGNGQLGIGSTSNKKSPSMV 341



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 105/373 (28%), Positives = 154/373 (41%), Gaps = 69/373 (18%)

Query: 37  RLPLTVGSAWRDV-CGG-GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPL 94
           R    +    RDV CG    GF +   D   + T G  +DLGQ  +   K  + PE    
Sbjct: 27  RCDFFINKNVRDVGCGNRHTGFVL---DDGTVYTCG-CNDLGQ--LGHDKSRKKPEQVGA 80

Query: 95  PTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSF 154
                IV  + G AH +A+ + G+V++WG           G +      D     R    
Sbjct: 81  LDAQIIVAVSCGEAHTLALNDKGQVFSWGHA-------AHGQIGVSIAEDYIRVPRNIKS 133

Query: 155 LTE----QVS----PRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDE 206
           L++    QV+        +S+ S   S G +  G    GS++R+        ES+    +
Sbjct: 134 LSDIQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKRK--------ESAPRHIK 185

Query: 207 NLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPH 266
           +LS  P           A +AAGG H+ AL+  G ++GWG    GQLGL           
Sbjct: 186 SLSGIP----------FAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDE-------- 227

Query: 267 PIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGW 326
                      DRS      S+ S+          +  I CG  H+A +T  G + TFG 
Sbjct: 228 ----------TDRSDPALLKSLRSQK---------IIYICCGEDHTAALTKEGGVFTFGA 268

Query: 327 GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFGGNQFGQLG 385
           G YGQ G  S   E++P  V  L+G  +  +A G  HT+  + S G +Y+FG    GQLG
Sbjct: 269 GGYGQLGHNSASHEVNPRKVFELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLG 328

Query: 386 TGGDQAETLPRLL 398
            G    +  P ++
Sbjct: 329 IGSTSNKKSPSMV 341



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 76/160 (47%), Gaps = 14/160 (8%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   +GQ G G  D+E  + P      +   +  V  G  HT  +  DG VY  G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEVVIEPRRCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G D++   P  + A   + +   +VSCG  HT  + D G+VF WG   +GQ+
Sbjct: 61  NDLGQL--GHDKSRKKPEQVGALDAQII--VAVSCGEAHTLALNDKGQVFSWGHAAHGQI 116

Query: 439 GLGDVID-----RNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           G+    D     RNI S   I+      VACG  H+L L+
Sbjct: 117 GVSIAEDYIRVPRNIKSLSDIQIV---QVACGHHHSLALS 153


>gi|297709728|ref|XP_002831574.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Pongo abelii]
          Length = 225

 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 60/169 (35%), Positives = 93/169 (55%), Gaps = 2/169 (1%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           ++CG  HSAV+T    L  FG   +GQ G GS      P CV +L   +++  A G  HT
Sbjct: 40  VSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHT 99

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           +  +  G+VYA GGN  GQLG G  +      ++   + E+   K +S G+  +A + +D
Sbjct: 100 LVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEH-KIKQLSAGSNTSAALTED 158

Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           G++F WG N  GQ+GL +V +  +P QVTI   V   ++CG++H+  + 
Sbjct: 159 GRLFMWGDNSEGQIGLKNVTNVCVPQQVTIGKPVSW-ISCGYYHSAFVT 206



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 48/200 (24%), Positives = 86/200 (43%), Gaps = 36/200 (18%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
           V+ G  H+  ++   +++ +G    GQLGLGS+   VS P    C+++            
Sbjct: 40  VSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSK-SAVSKP---TCVKA------------ 83

Query: 286 GSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNC 345
                      +    VK  ACG  H+ V T+ G +   G    GQ G G T++  + + 
Sbjct: 84  -----------LKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHV 132

Query: 346 VSSLLG-IQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPR--LLDAPS 402
           +S      +I+ ++AG   +  ++ DG ++ +G N  GQ+G        +P+   +  P 
Sbjct: 133 ISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVTNVCVPQQVTIGKP- 191

Query: 403 LENVHSKSVSCGARHTAVIA 422
                   +SCG  H+A + 
Sbjct: 192 -----VSWISCGYYHSAFVT 206



 Score = 42.4 bits (98), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 54/130 (41%), Gaps = 29/130 (22%)

Query: 213 CLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR--------IRMVSS 264
           C+  L P  ++   A G  HTL  ++ G V+  G   EGQLGLG          I   +S
Sbjct: 80  CVKALKPE-KVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTS 138

Query: 265 PHPIPCIESSYGKDRSAALSRGSV------NSEG------------PGFRVPGNYVKGIA 306
            H I  +  S G + SAAL+          NSEG            P     G  V  I+
Sbjct: 139 EHKIKQL--SAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVTNVCVPQQVTIGKPVSWIS 196

Query: 307 CGGRHSAVIT 316
           CG  HSA +T
Sbjct: 197 CGYYHSAFVT 206


>gi|431911482|gb|ELK13688.1| Putative E3 ubiquitin-protein ligase HERC3 [Pteropus alecto]
          Length = 1017

 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 82/250 (32%), Positives = 113/250 (45%), Gaps = 30/250 (12%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  VA G  H+LALSD GQ++ WG G +GQLGL +    V+ P  I              
Sbjct: 133 IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ------------- 179

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDEL 341
                        ++    +  ++CG  H   +   G   T+G   +GQ G G     + 
Sbjct: 180 -------------KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQA 226

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  V SL GI +  VAAG  H+  +S  G V+A+G N  GQLG   ++    P  +   
Sbjct: 227 SPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFAWGMNNAGQLGLSDEEDRESPCHVKLL 286

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPR 460
             + V    +SCG  HTAV+   G VF +G    GQLG   + D   P +V  + G    
Sbjct: 287 RTQKV--VYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVT 344

Query: 461 NVACGWWHTL 470
            +ACG  HTL
Sbjct: 345 QIACGRQHTL 354



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 138/308 (44%), Gaps = 51/308 (16%)

Query: 84  KHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGL 143
           + G  PE      + +IV  A G +H +A+++ G++++WG           G L   T  
Sbjct: 117 REGNKPEQIGALADQNIVHVACGESHSLALSDRGQLFSWG-------AGSDGQLGLMTTE 169

Query: 144 DKDVFERQSSFLTEQVSPRSQVSRSSGG---TSSGTDGRGSGEEGSKRRRISLAKQTAES 200
           D     R    L ++++ ++ +  S G     +   DG+      +   ++ L K+    
Sbjct: 170 DSVAVPR----LIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 225

Query: 201 SSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR 260
           +S         P  V    G+ +A VAAGG H+ ALS  G V+ WG    GQLGL     
Sbjct: 226 AS---------PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFAWGMNNAGQLGLSDE-- 274

Query: 261 MVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA 320
                           +DR +      + ++          V  I+CG  H+AV+T +G 
Sbjct: 275 ----------------EDRESPCHVKLLRTQK---------VVYISCGEEHTAVLTKSGG 309

Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFGGN 379
           + TFG G  GQ G  S +DE++P  V  L+G ++  +A G  HT+  + S G +YAFG  
Sbjct: 310 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 369

Query: 380 QFGQLGTG 387
             GQLGTG
Sbjct: 370 ARGQLGTG 377



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 120/255 (47%), Gaps = 38/255 (14%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  VA GG H++ L + G+V+  G   +GQLG     R  + P  I              
Sbjct: 83  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG---HEREGNKPEQI-------------- 125

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
              G++  +          +  +ACG  HS  ++D G L ++G G  GQ G  +T+D ++
Sbjct: 126 ---GALADQN---------IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA 173

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD-QAETLPRLLDA 400
            P  +  L    I  V+ G WH + +++DG  + +G N  GQLG G +  ++  P+    
Sbjct: 174 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQ--RV 231

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI---EGC 457
            SLE +    V+ G  H+  ++  G VF WG N  GQLGL D  DR  P  V +   +  
Sbjct: 232 RSLEGIPLAQVAAGGAHSFALSLSGAVFAWGMNNAGQLGLSDEEDRESPCHVKLLRTQKV 291

Query: 458 VPRNVACGWWHTLLL 472
           V   ++CG  HT +L
Sbjct: 292 V--YISCGEEHTAVL 304



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/180 (32%), Positives = 90/180 (50%), Gaps = 15/180 (8%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           VK +ACGG HS  + + G + T G    GQ G     ++  P  + +L    I  VA G 
Sbjct: 83  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK--PEQIGALADQNIVHVACGE 140

Query: 362 WHTICISSDGDVYAFGGNQFGQLG-TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            H++ +S  G ++++G    GQLG    + +  +PRL+   + + +    VSCG  H   
Sbjct: 141 SHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLA 198

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV------TIEGCVPRNVACGWWHTLLLAV 474
           +A DG+ F WG N +GQLGLG    +  PSQ       ++EG     VA G  H+  L++
Sbjct: 199 LAADGQFFTWGKNSHGQLGLG----KEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSL 254



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 99/399 (24%), Positives = 159/399 (39%), Gaps = 81/399 (20%)

Query: 39  PLTVGS-AWRDVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLP 95
           P  +G+ A +++    CG   ++A+SD  +L +WG+  D     +T+     +P      
Sbjct: 122 PEQIGALADQNIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 181

Query: 96  TEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFL 155
            + +I++ + G  HC+A+   G+ +TWG           G L    GL K+         
Sbjct: 182 NQQTILQVSCGNWHCLALAADGQFFTWGKNS-------HGQL----GLGKE--------F 222

Query: 156 TEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLA-------KQTAESSSSGDENL 208
             Q SP  Q  RS  G        G    G+    +SL+          A      DE  
Sbjct: 223 PSQASP--QRVRSLEGIPLAQVAAG----GAHSFALSLSGAVFAWGMNNAGQLGLSDEED 276

Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
              PC V L    ++  ++ G  HT  L+  G V+ +G G  GQLG  S   M    +P 
Sbjct: 277 RESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDS---MNDEVNPR 333

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHS-AVITDAGALLTFGWG 327
             +E                        + G+ V  IACG +H+ A +  +G +  FG G
Sbjct: 334 RVLE------------------------LMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 369

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLG 385
             GQ G G T +   P+ V             G W  H   +S+  D + +  +   Q+ 
Sbjct: 370 ARGQLGTGHTCNVKCPSPVK------------GYWAAHNGQLSARADRFKY--HIVKQIF 415

Query: 386 TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           +GGDQ   L    +  S   V  ++V+  A +T++I D+
Sbjct: 416 SGGDQTFVLCSKYENSS-PAVDFRTVN-QAHYTSLINDE 452


>gi|52345808|ref|NP_001004950.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Xenopus (Silurana) tropicalis]
 gi|49522414|gb|AAH75441.1| MGC89218 protein [Xenopus (Silurana) tropicalis]
          Length = 526

 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 125/254 (49%), Gaps = 29/254 (11%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++ A V   G   L L+   +V+  G    G LG G   + +  P  I  +    GK R 
Sbjct: 21  IQQACVFGAGNEVLYLTKNDEVFVMGTNSSGCLGTGDA-QSILEPRRIDMLS---GK-RI 75

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
            +LS GS                     G H  ++T  G + ++G   Y Q G GST+  
Sbjct: 76  VSLSYGS---------------------GPHVVIVTSDGEVYSWGHNAYSQLGNGSTNQA 114

Query: 341 LSPNCVSS-LLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLD 399
           LSP  VS+ L+  +   VA G  H++ ++ DG+VYA+G N  GQ+G+G    + +PR + 
Sbjct: 115 LSPCQVSTNLINKKAISVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVT 174

Query: 400 APSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCV 458
           +  L+N     ++CG   +  + D+G+V+ WG+N  GQLGLG   ++  P ++  ++G  
Sbjct: 175 S-CLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIR 233

Query: 459 PRNVACGWWHTLLL 472
              V CG+ HTL L
Sbjct: 234 VEQVVCGYAHTLAL 247



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 119/233 (51%), Gaps = 34/233 (14%)

Query: 203 SGDENLSAFPCLVTLN-PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +G  N +  PC V+ N    +  +VA G  H++ L+  G+V+ WGY   GQ+G GS    
Sbjct: 108 NGSTNQALSPCQVSTNLINKKAISVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGS---- 163

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
            ++  PIP   +S  ++++                     V GIACG   S  + D G +
Sbjct: 164 -TANQPIPRKVTSCLQNKT---------------------VIGIACGQMSSMAVVDNGEV 201

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             +G+   GQ G GS+ ++ +P  +++L GI++E V  G  HT+ ++ +G +YA+G N +
Sbjct: 202 YAWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSY 261

Query: 382 GQLGTGGDQAETLP--RLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           GQLGTG    ++ P   ++D   +  +     +C + HT A  +  G+V+ WG
Sbjct: 262 GQLGTGNKSNQSYPVQVIVDKERIVEI----AACHSSHTSAAKSQSGQVYMWG 310



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 82/197 (41%), Gaps = 36/197 (18%)

Query: 101 VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
           +  A G  H + +T  GEVY WG+          G + +G+  ++ +  + +S L  +  
Sbjct: 130 ISVACGSHHSMVLTCDGEVYAWGYNNS-------GQVGSGSTANQPIPRKVTSCLQNKTV 182

Query: 161 ------PRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCL 214
                   S ++    G        G+G+ G                SSG++     PC 
Sbjct: 183 IGIACGQMSSMAVVDNGEVYAWGYNGNGQLG--------------LGSSGNQ---PTPCR 225

Query: 215 VTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR------IRMVSSPHPI 268
           +    G+R+  V  G  HTLAL+D G ++ WG    GQLG G++      ++++     I
Sbjct: 226 IAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGNKSNQSYPVQVIVDKERI 285

Query: 269 PCIESSYGKDRSAALSR 285
             I + +    SAA S+
Sbjct: 286 VEIAACHSSHTSAAKSQ 302


>gi|345788791|ref|XP_542564.3| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Canis lupus familiaris]
          Length = 529

 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 68/203 (33%), Positives = 110/203 (54%), Gaps = 7/203 (3%)

Query: 276 GKDRSAALSRGSVNSEGPGFRVPGNYVKGIAC----GGRHSAVITDAGALLTFGWGLYGQ 331
           G +    L  G V S     R+     K IAC     G H  + T  G + T+G   Y Q
Sbjct: 71  GTNCCGCLGLGDVQSTIEPRRLDALSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQ 130

Query: 332 CGQGSTDDELSPNCVSS-LLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            G G+T+  L P  +S+ L   Q+  VA G +H++ ++SDG+V+A+G N  GQ+G+G   
Sbjct: 131 LGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTA 190

Query: 391 AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
            + +PR +    L+N    +++CG   +  + + G+V+ WG+N  GQLGLG   ++  P 
Sbjct: 191 NQPIPRRVTG-CLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPC 249

Query: 451 QVT-IEGCVPRNVACGWWHTLLL 472
           ++  ++G   + VACG+ HTL+L
Sbjct: 250 RIAALQGIRIQRVACGYAHTLVL 272



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 124/254 (48%), Gaps = 30/254 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMV 262
           GD   +  P  +    G +IA ++ G G H +  +  G+V+ WG+    QLG G+    +
Sbjct: 81  GDVQSTIEPRRLDALSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGL 140

Query: 263 SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL 322
                +PC  S+   ++                      V  +ACG  HS V+T  G + 
Sbjct: 141 -----VPCHISTNLSNKQ---------------------VTEVACGSYHSLVLTSDGEVF 174

Query: 323 TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE-GVAAGLWHTICISSDGDVYAFGGNQF 381
            +G+   GQ G GST ++  P  V+  L  ++   +A G   ++ + + G+VY +G N  
Sbjct: 175 AWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGN 234

Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
           GQLG G    +  P  + A  L+ +  + V+CG  HT V+ D+G+V+ WG N YGQLG G
Sbjct: 235 GQLGLGSSGNQPTPCRIAA--LQGIRIQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 292

Query: 442 DVIDRNIPSQVTIE 455
           +  +++ P+ V +E
Sbjct: 293 NKSNQSYPAPVVVE 306



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 114/233 (48%), Gaps = 34/233 (14%)

Query: 203 SGDENLSAFPCLVTLN-PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +G  N    PC ++ N    ++  VA G  H+L L+  G+V+ WGY   GQ+G GS    
Sbjct: 133 NGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---- 188

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
            ++  PIP         R     +  V             V  IACG   S  + + G +
Sbjct: 189 -TANQPIP--------RRVTGCLQNKV-------------VVNIACGQMCSMAVVNTGEV 226

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             +G+   GQ G GS+ ++ +P  +++L GI+I+ VA G  HT+ ++ +G VYA+G N +
Sbjct: 227 YVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRIQRVACGYAHTLVLTDEGQVYAWGANSY 286

Query: 382 GQLGTGG--DQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           GQLGTG   +Q+   P +++   +  +     +C + HT A     G V+ WG
Sbjct: 287 GQLGTGNKSNQSYPAPVVVEKDRIVEI----AACHSAHTSAAKTQGGHVYMWG 335



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 52/105 (49%), Gaps = 3/105 (2%)

Query: 370 DGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFC 429
           + +++  G N  G LG G  Q+   PR LDA S + +   S   G  H  +   +G+VF 
Sbjct: 64  NDEIFVLGTNCCGCLGLGDVQSTIEPRRLDALSGKKIACLSYGSGP-HIVLATTEGEVFT 122

Query: 430 WGWNKYGQLGLGDVIDRNIPSQVT--IEGCVPRNVACGWWHTLLL 472
           WG N Y QLG G      +P  ++  +       VACG +H+L+L
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVL 167


>gi|344292741|ref|XP_003418084.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Loxodonta africana]
          Length = 1100

 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 136/301 (45%), Gaps = 48/301 (15%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR--------IRMVS 263
           P  V      ++   A G  HTL  ++ G V+  G   EGQLGLG          I   +
Sbjct: 74  PICVKALKSEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNSFHLISFFT 133

Query: 264 SPHPIPCIESSYGKDRSAALSRGSV------NSEGP-------GFRVPGNYVKG-----I 305
           S H I  +  S G + SAAL+          NSEG           VP     G     I
Sbjct: 134 SRHKIKQL--SAGANISAALTEDGELFMWGDNSEGQIGLNSISNVYVPRQVTVGKPISWI 191

Query: 306 ACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD--DELSPNCVSSLLGIQIEGVAAGLWH 363
           +CG  HSA +T  G L TFG    G+ G  S    +   P  VS +    I+ VA G  H
Sbjct: 192 SCGYYHSAFVTMEGKLYTFGEPECGKLGLPSEQLINHRKPQLVSGISEKVIQ-VACGGGH 250

Query: 364 TICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPS---LENVHS---KSVSCGARH 417
           T+ ++    VY FG  +FGQLG G         +  AP    LE+V     + +SCG  H
Sbjct: 251 TVVLTEKA-VYTFGQGRFGQLGLGS-------FIFQAPEPAILEHVKDQKIRHISCGENH 302

Query: 418 TAVIADDGKVFCWGWNKYGQLGLG--DVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLAV 474
           TA+I D G ++ +G  ++G+LGLG  +  ++ +P+  +     +   VACG  H L+ A+
Sbjct: 303 TALITDVGHMYTFGDGRHGKLGLGLENFTNQFVPTLCSHFSKFIIHLVACGGCHMLIFAI 362

Query: 475 P 475
           P
Sbjct: 363 P 363



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 92/171 (53%), Gaps = 4/171 (2%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           ++CG  H+A+IT    L  FG   +GQ G GS      P CV +L   +++  A G  HT
Sbjct: 36  LSCGDEHTALITGNNKLYMFGSNNWGQLGLGSKSAVYRPICVKALKSEKVKLAACGRNHT 95

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHS-KSVSCGARHTAVIAD 423
           +  +  G+VYA GGN  GQLG G  +      L+      + H  K +S GA  +A + +
Sbjct: 96  LVSTEGGNVYATGGNNEGQLGLGDTEERNSFHLISF--FTSRHKIKQLSAGANISAALTE 153

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAV 474
           DG++F WG N  GQ+GL  + +  +P QVT+ G     ++CG++H+  + +
Sbjct: 154 DGELFMWGDNSEGQIGLNSISNVYVPRQVTV-GKPISWISCGYYHSAFVTM 203



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 74/281 (26%), Positives = 126/281 (44%), Gaps = 44/281 (15%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
           ++ G  HT  ++   +++ +G    GQLGLGS+   V  P  +  ++S   K + AA  R
Sbjct: 36  LSCGDEHTALITGNNKLYMFGSNNWGQLGLGSK-SAVYRPICVKALKSE--KVKLAACGR 92

Query: 286 GSV--------------NSEGP---------------GFRVPGNYVKGIACGGRHSAVIT 316
                            N+EG                 F    + +K ++ G   SA +T
Sbjct: 93  NHTLVSTEGGNVYATGGNNEGQLGLGDTEERNSFHLISFFTSRHKIKQLSAGANISAALT 152

Query: 317 DAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAF 376
           + G L  +G    GQ G  S  +   P  V+  +G  I  ++ G +H+  ++ +G +Y F
Sbjct: 153 EDGELFMWGDNSEGQIGLNSISNVYVPRQVT--VGKPISWISCGYYHSAFVTMEGKLYTF 210

Query: 377 GGNQFGQLGTGGDQ--AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNK 434
           G  + G+LG   +Q      P+L+   S + +    V+CG  HT V+ +   V+ +G  +
Sbjct: 211 GEPECGKLGLPSEQLINHRKPQLVSGISEKVIQ---VACGGGHTVVLTEKA-VYTFGQGR 266

Query: 435 YGQLGLGDVIDRNIPSQVTIEGCVP---RNVACGWWHTLLL 472
           +GQLGLG  I +  P    +E       R+++CG  HT L+
Sbjct: 267 FGQLGLGSFIFQ-APEPAILEHVKDQKIRHISCGENHTALI 306


>gi|222629908|gb|EEE62040.1| hypothetical protein OsJ_16822 [Oryza sativa Japonica Group]
          Length = 841

 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 121/258 (46%), Gaps = 41/258 (15%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G+ +A V+ G  HT  ++ +GQ++ +G G  G LG G+ +  +S P  +  +        
Sbjct: 183 GLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGN-LTSISCPKEVESLS------- 234

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITD-----------AGALLTFGWGL 328
                              G     +ACG  H+A I +           AG L T+G G 
Sbjct: 235 -------------------GLKTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGD 275

Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGG 388
             + G G  +  L P CV+SL+      VA G   T+C+++ G V + G + +GQLG   
Sbjct: 276 KHRLGHGDKESRLKPTCVASLIDYDFYRVACGHSLTVCLTTSGKVLSMGNSVYGQLGNPN 335

Query: 389 DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNI 448
                LP L++   +   H   V+CG+ H AV+    +VF WG    G+LG GD+ DR +
Sbjct: 336 SDGR-LPCLVE-DRIAGEHVLQVACGSYHVAVLTGRSEVFTWGKGANGRLGHGDIEDRKV 393

Query: 449 PSQV-TIEGCVPRNVACG 465
           P+QV  ++    R++ACG
Sbjct: 394 PTQVEALKDRAVRHIACG 411



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 58/171 (33%), Positives = 95/171 (55%), Gaps = 4/171 (2%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V  + CG RH+A++T  G + T+G    G+ G G+ +D + P  V SL    ++ VA G 
Sbjct: 79  VYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNVDFVACGE 138

Query: 362 WHTICISSDGDVYAFGG--NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
           +HT  +++ G++Y +G   +  G LG G D    +P+ +   +L+ +    VSCG  HTA
Sbjct: 139 FHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISG-ALDGLPVAYVSCGTWHTA 197

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
           +I   G++F +G   +G LG G++   + P +V ++ G     VACG WHT
Sbjct: 198 LITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESLSGLKTIAVACGVWHT 248



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 72/138 (52%), Gaps = 6/138 (4%)

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D L P  + S L + +  V  G+ H   ++ +GDV+ +G +  G+LG G  +    PRL+
Sbjct: 64  DFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSVHPRLV 123

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCW--GWNKYGQLGLGDVIDRNIPSQVT--I 454
           ++ +  NV    V+CG  HT  +   G+++ W  G +  G LG G      IP +++  +
Sbjct: 124 ESLAACNV--DFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGAL 181

Query: 455 EGCVPRNVACGWWHTLLL 472
           +G     V+CG WHT L+
Sbjct: 182 DGLPVAYVSCGTWHTALI 199



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 89/204 (43%), Gaps = 40/204 (19%)

Query: 204 GDENLSAFPCLVTLNP--GVRIATVAAGGRHTLALSDI-----------GQVWGWGYGGE 250
           G  NL++  C   +    G++   VA G  HT A+ ++           G+++ WG G +
Sbjct: 217 GHGNLTSISCPKEVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDK 276

Query: 251 GQLGLG---SRIR-------------MVSSPHPIPCIESSYGKDRSAALS----RGSVNS 290
            +LG G   SR++              V+  H +    ++ GK  S   S     G+ NS
Sbjct: 277 HRLGHGDKESRLKPTCVASLIDYDFYRVACGHSLTVCLTTSGKVLSMGNSVYGQLGNPNS 336

Query: 291 EG--PGF---RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNC 345
           +G  P     R+ G +V  +ACG  H AV+T    + T+G G  G+ G G  +D   P  
Sbjct: 337 DGRLPCLVEDRIAGEHVLQVACGSYHVAVLTGRSEVFTWGKGANGRLGHGDIEDRKVPTQ 396

Query: 346 VSSLLGIQIEGVAAGLWHT--ICI 367
           V +L    +  +A G   T  IC+
Sbjct: 397 VEALKDRAVRHIACGANFTAAICL 420


>gi|15223423|ref|NP_174026.1| regulator of chromosome condensation-like protein [Arabidopsis
           thaliana]
 gi|124301018|gb|ABN04761.1| At1g27060 [Arabidopsis thaliana]
 gi|332192654|gb|AEE30775.1| regulator of chromosome condensation-like protein [Arabidopsis
           thaliana]
          Length = 386

 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 115/389 (29%), Positives = 167/389 (42%), Gaps = 56/389 (14%)

Query: 68  TWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKEC 127
           +WG+  D GQ   T  +   +P+   L +  SI   A G AH +A+T GG+V+TWG    
Sbjct: 19  SWGAGTD-GQLGTTKLQDELLPQLLSLTSLPSISMLACGGAHVIALTSGGKVFTWGRGSS 77

Query: 128 VPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSK 187
              G   GD+   T L K V     S +T+  +  S     S      T G GS  +   
Sbjct: 78  GQLGH--GDILNIT-LPKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTCGNGSFGQLGH 134

Query: 188 RRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGY 247
              +SL+     S  + D                 +  VA G RH+L L    QV G+G 
Sbjct: 135 GDTLSLSTPAKVSHFNNDS----------------VKMVACGMRHSLVLFAGNQVCGFGS 178

Query: 248 GGEGQLGLGS-RIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIA 306
           G  GQLG  S RI+ V+    +PC+ S   KD                       V  I+
Sbjct: 179 GKRGQLGFSSDRIKSVN----LPCVVSGL-KDVE---------------------VVRIS 212

Query: 307 CGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC 366
             G HSA I+  G    F WG  G CG     D  +P  + S L  +   VA G  H + 
Sbjct: 213 ANGDHSAAISADGQF--FSWG-RGFCG---GPDVHAPQSLPSPLSFR--EVAVGWNHALL 264

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLD-APSLENVHSKSVSCGARHTAVIADDG 425
           ++ DG+V+  G     Q      Q ++   L +  P  + V    ++ GA H+A + ++G
Sbjct: 265 LTVDGEVFKLGSTLNKQPEKQQLQIDSSEALFEKVPDFDGVKVMQIAAGAEHSAAVTENG 324

Query: 426 KVFCWGWNKYGQLGLGDVIDRNIPSQVTI 454
           +V  WGW ++GQLGLG+  D+  P  V++
Sbjct: 325 EVKTWGWGEHGQLGLGNTNDQTSPELVSL 353



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/265 (29%), Positives = 121/265 (45%), Gaps = 36/265 (13%)

Query: 211 FPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPC 270
            P L++L     I+ +A GG H +AL+  G+V+ WG G  GQLG G  I  ++ P  +  
Sbjct: 38  LPQLLSLTSLPSISMLACGGAHVIALTSGGKVFTWGRGSSGQLGHGD-ILNITLPKLVSF 96

Query: 271 IESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
            + S                           +   A G  HS  ++D+G + T G G +G
Sbjct: 97  FDDSV--------------------------ITQAAAGWSHSGFVSDSGCIFTCGNGSFG 130

Query: 331 QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
           Q G G T    +P  VS      ++ VA G+ H++ + +   V  FG  + GQLG   D+
Sbjct: 131 QLGHGDTLSLSTPAKVSHFNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQLGFSSDR 190

Query: 391 AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDV-IDRNIP 449
            +++        L++V    +S    H+A I+ DG+ F WG    G  G  DV   +++P
Sbjct: 191 IKSVNLPCVVSGLKDVEVVRISANGDHSAAISADGQFFSWG---RGFCGGPDVHAPQSLP 247

Query: 450 SQVTIEGCVPRNVACGWWHTLLLAV 474
           S ++      R VA GW H LLL V
Sbjct: 248 SPLSF-----REVAVGWNHALLLTV 267


>gi|55832766|gb|AAV66896.1| truncated HERC6 [Homo sapiens]
          Length = 364

 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 80/253 (31%), Positives = 119/253 (47%), Gaps = 34/253 (13%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  V+ G  H+LA+   G+V+ WG G EGQLG+G    +  +P  I  +           
Sbjct: 77  VDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTL----------- 125

Query: 283 LSRGSVNSEGPGFRVPGNYVK--GIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DD 339
                            N +K   ++CG  HS  ++    + ++G   +GQ G G     
Sbjct: 126 -----------------NDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPS 168

Query: 340 ELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLP-RLL 398
           + SP  V SL GI +  VAAG  H+  +S  G  + +G N  GQL   G        + L
Sbjct: 169 QASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPL 228

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGC 457
              +L+N+    +SCG  HTAV+  DGKVF +G N+ GQLG     ++  P  V  I+G 
Sbjct: 229 SVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGL 288

Query: 458 VPRNVACGWWHTL 470
           V + + CG +HTL
Sbjct: 289 VSQ-IDCGSYHTL 300



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 119/296 (40%), Gaps = 45/296 (15%)

Query: 84  KHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGL 143
           + GE+PEP        +   + G  H +AV   G V+ WG            +   G G 
Sbjct: 61  QRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGS---------EGQLGIGE 111

Query: 144 DKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSS 203
            K++       +T       QVS   G   S    + S       +  S  K +      
Sbjct: 112 FKEISFTPKKIMTLNDIKIIQVS--CGHYHSLALSKDS-------QVFSWGKNSHGQLGL 162

Query: 204 GDENLS-AFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMV 262
           G E  S A P  V    G+ +A VAAGG H+ ALS  G  +GWG    GQL L  R   V
Sbjct: 163 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPV 222

Query: 263 SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL 322
            S  P               LS G++ + G         V  I+CG  H+AV+T  G + 
Sbjct: 223 QSNKP---------------LSVGALKNLG---------VVYISCGDAHTAVLTQDGKVF 258

Query: 323 TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFG 377
           TFG    GQ G   T ++  P  V  + G+ +  +  G +HT+  + + G V +FG
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLVERIDGL-VSQIDCGSYHTLAYVHTTGQVVSFG 313



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 71/141 (50%), Gaps = 4/141 (2%)

Query: 335 GSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL 394
           G+   EL     +   G ++   A+G  H++ + ++  V + G N  GQLG  G Q   L
Sbjct: 6   GADSRELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGEL 65

Query: 395 PRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNI-PSQV- 452
           P  + A  LE +    VSCG  H+  +   G+VF WG    GQLG+G+  + +  P ++ 
Sbjct: 66  PEPIQA--LETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIM 123

Query: 453 TIEGCVPRNVACGWWHTLLLA 473
           T+       V+CG +H+L L+
Sbjct: 124 TLNDIKIIQVSCGHYHSLALS 144


>gi|119626423|gb|EAX06018.1| hect domain and RLD 6, isoform CRA_a [Homo sapiens]
          Length = 385

 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 117/251 (46%), Gaps = 30/251 (11%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  V+ G  H+LA+   G+V+ WG G EGQLG+G    +  +P  I  +           
Sbjct: 77  VDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIK------- 129

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDEL 341
                              +  ++CG  HS  ++    + ++G   +GQ G G     + 
Sbjct: 130 -------------------IIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQA 170

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLP-RLLDA 400
           SP  V SL GI +  VAAG  H+  +S  G  + +G N  GQL   G        + L  
Sbjct: 171 SPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSV 230

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVP 459
            +L+N+    +SCG  HTAV+  DGKVF +G N+ GQLG     ++  P  V  I+G V 
Sbjct: 231 GALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVS 290

Query: 460 RNVACGWWHTL 470
           + + CG +HTL
Sbjct: 291 Q-IDCGSYHTL 300



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 119/296 (40%), Gaps = 45/296 (15%)

Query: 84  KHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGL 143
           + GE+PEP        +   + G  H +AV   G V+ WG            +   G G 
Sbjct: 61  QRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGS---------EGQLGIGE 111

Query: 144 DKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSS 203
            K++       +T       QVS   G   S    + S       +  S  K +      
Sbjct: 112 FKEISFTPKKIMTLNDIKIIQVS--CGHYHSLALSKDS-------QVFSWGKNSHGQLGL 162

Query: 204 GDENLS-AFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMV 262
           G E  S A P  V    G+ +A VAAGG H+ ALS  G  +GWG    GQL L  R   V
Sbjct: 163 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPV 222

Query: 263 SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL 322
            S  P               LS G++ + G         V  I+CG  H+AV+T  G + 
Sbjct: 223 QSNKP---------------LSVGALKNLG---------VVYISCGDAHTAVLTQDGKVF 258

Query: 323 TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFG 377
           TFG    GQ G   T ++  P  V  + G+ +  +  G +HT+  + + G V +FG
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLVERIDGL-VSQIDCGSYHTLAYVHTTGQVVSFG 313



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 71/141 (50%), Gaps = 4/141 (2%)

Query: 335 GSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL 394
           G+   EL     +   G ++   A+G  H++ + ++  V + G N  GQLG  G Q   L
Sbjct: 6   GADSRELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGEL 65

Query: 395 PRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNI-PSQV- 452
           P  + A  LE +    VSCG  H+  +   G+VF WG    GQLG+G+  + +  P ++ 
Sbjct: 66  PEPIQA--LETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIM 123

Query: 453 TIEGCVPRNVACGWWHTLLLA 473
           T+       V+CG +H+L L+
Sbjct: 124 TLNDIKIIQVSCGHYHSLALS 144


>gi|86129504|ref|NP_001034387.1| probable E3 ubiquitin-protein ligase HERC3 [Gallus gallus]
 gi|60098971|emb|CAH65316.1| hypothetical protein RCJMB04_17g7 [Gallus gallus]
          Length = 1050

 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 94/306 (30%), Positives = 139/306 (45%), Gaps = 51/306 (16%)

Query: 86  GEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDK 145
           G  PEP        IV  A G +H VA+++ G+V++WG      +G   G L   T  D 
Sbjct: 72  GSKPEPIGALAGQHIVHVACGESHSVALSDQGQVFSWG------AGSD-GQLGLTTIEDA 124

Query: 146 DVFERQSSFLTEQVSPRSQVSRSSGG---TSSGTDGRGSGEEGSKRRRISLAKQTAESSS 202
               R    L ++++ ++ +  S G     +   DG+      +   ++ L K+    +S
Sbjct: 125 VTVPR----LIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQAS 180

Query: 203 SGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMV 262
                    P  V    G+ +A VAAGG H+ ALS  G V+GWG    GQLGL       
Sbjct: 181 ---------PQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDE---- 227

Query: 263 SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL 322
                         +DR +      + S+          V  I+CG  H+AV+T +G + 
Sbjct: 228 --------------RDRESPCHVKLLRSQK---------VVYISCGEEHTAVLTKSGGVF 264

Query: 323 TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFGGNQF 381
           TFG G  GQ G  S +DE++P  V  L+G ++  +A G  HT+  + S G +YAFG    
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTR 324

Query: 382 GQLGTG 387
           GQLGTG
Sbjct: 325 GQLGTG 330



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 120/255 (47%), Gaps = 34/255 (13%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
            +  VA GG H++ L + G+V+  G   +GQLG  S     S P PI             
Sbjct: 35  NVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHESE---GSKPEPI------------G 79

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL 341
           AL+              G ++  +ACG  HS  ++D G + ++G G  GQ G  + +D +
Sbjct: 80  ALA--------------GQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAV 125

Query: 342 S-PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD-QAETLPRLLD 399
           + P  +  L    I  ++ G WH + +++DG  + +G N +GQLG G +  ++  P+   
Sbjct: 126 TVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQ--R 183

Query: 400 APSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCV 458
             SL+ +    V+ G  H+  ++  G VF WG N  GQLGL D  DR  P  V  +    
Sbjct: 184 VKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQK 243

Query: 459 PRNVACGWWHTLLLA 473
              ++CG  HT +L 
Sbjct: 244 VVYISCGEEHTAVLT 258



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 82/263 (31%), Positives = 112/263 (42%), Gaps = 34/263 (12%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP------CIES 273
           G  I  VA G  H++ALSD GQV+ WG G +GQLGL +    V+ P  I        ++ 
Sbjct: 83  GQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQI 142

Query: 274 SYGKDRSAALS---------RGSVNSEGPGFRVP------------GNYVKGIACGGRHS 312
           S G     AL+         + S    G G   P            G  +  +A GG HS
Sbjct: 143 SCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHS 202

Query: 313 AVITDAGALLTFGWGLY--GQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
             ++ +GA+  FGWG    GQ G     D  SP  V  L   ++  ++ G  HT  ++  
Sbjct: 203 FALSLSGAV--FGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKS 260

Query: 371 GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFC 429
           G V+ FG    GQLG      E  PR      L       ++CG  HT A +   G ++ 
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPR--RVLELMGSEVSQIACGRHHTLAFVPSSGMIYA 318

Query: 430 WGWNKYGQLGLGDVIDRNIPSQV 452
           +G    GQLG G   +   PS V
Sbjct: 319 FGCGTRGQLGTGHTCNVKCPSPV 341



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 76/157 (48%), Gaps = 8/157 (5%)

Query: 321 LLTFGWGLYGQCGQGSTDDEL--SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G+  +GQ G GS    +   P     +    ++ VA G  H++ +  DG+VY  G 
Sbjct: 1   MLCWGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQLG   + ++  P      +L   H   V+CG  H+  ++D G+VF WG    GQL
Sbjct: 61  NTKGQLGHESEGSKPEP----IGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQL 116

Query: 439 GLGDVIDR-NIPSQVT-IEGCVPRNVACGWWHTLLLA 473
           GL  + D   +P  +  +       ++CG WH L LA
Sbjct: 117 GLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALA 153



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 77/313 (24%), Positives = 121/313 (38%), Gaps = 62/313 (19%)

Query: 45  AWRDVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVK 102
           A + +    CG   ++A+SD  ++ +WG+  D      T      +P       + +I++
Sbjct: 82  AGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQ 141

Query: 103 AAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPR 162
            + G  HC+A+   G+ +TWG          +G L    GL K+           Q SP 
Sbjct: 142 ISCGNWHCLALAADGQFFTWGQNS-------YGQL----GLGKEC--------PSQASP- 181

Query: 163 SQVSRSSGGTSSGTDGRGSGEEGSKRRRISLA-------KQTAESSSSGDENLSAFPCLV 215
            Q  +S  G        G    G+    +SL+       K ++      DE     PC V
Sbjct: 182 -QRVKSLDGIPLAQVAAG----GAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHV 236

Query: 216 TLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSY 275
            L    ++  ++ G  HT  L+  G V+ +G G  GQLG  S   M    +P   +E   
Sbjct: 237 KLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDS---MNDEVNPRRVLE--- 290

Query: 276 GKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHS-AVITDAGALLTFGWGLYGQCGQ 334
                                + G+ V  IACG  H+ A +  +G +  FG G  GQ G 
Sbjct: 291 ---------------------LMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGT 329

Query: 335 GSTDDELSPNCVS 347
           G T +   P+ V 
Sbjct: 330 GHTCNVKCPSPVK 342


>gi|62088666|dbj|BAD92780.1| RCC1-like G exchanging factor RLG variant [Homo sapiens]
          Length = 556

 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 70/203 (34%), Positives = 110/203 (54%), Gaps = 7/203 (3%)

Query: 276 GKDRSAALSRGSVNSEGPGFRVPGNYVKGIAC----GGRHSAVITDAGALLTFGWGLYGQ 331
           G +    L  G V S     R+     K IAC     G H  + T  G + T+G   Y Q
Sbjct: 76  GTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQ 135

Query: 332 CGQGSTDDELSPNCVSS-LLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            G G+T+  L P  +S+ L   Q+  VA G +H++ ++SDG+V+A+G N  GQ+G+G   
Sbjct: 136 LGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTV 195

Query: 391 AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
            + +PR +    L+N    +++CG      + D G+V+ WG+N  GQLGLG+  ++  P 
Sbjct: 196 NQPIPRRVTG-CLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPC 254

Query: 451 QVT-IEGCVPRNVACGWWHTLLL 472
           +V  ++G   + VACG+ HTL+L
Sbjct: 255 RVAALQGIRVQRVACGYAHTLVL 277



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 122/244 (50%), Gaps = 31/244 (12%)

Query: 214 LVTLNPGVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIE 272
           L +LN G +IA ++ G G H +  +  G+V+ WG+    QLG G+     ++   +PC  
Sbjct: 97  LDSLN-GKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT-----TNHGLVPCHI 150

Query: 273 SSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQC 332
           S+                      +    V  +ACG  HS V+T  G +  +G+   GQ 
Sbjct: 151 ST---------------------NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQV 189

Query: 333 GQGSTDDELSPNCVSSLLGIQIE-GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
           G GST ++  P  V+  L  ++   +A G    + +   G+VY +G N  GQLG G    
Sbjct: 190 GSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGN 249

Query: 392 ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
           +  P  + A  L+ +  + V+CG  HT V+ D+G+V+ WG N YGQLG G+  +++ P+ 
Sbjct: 250 QPTPCRVAA--LQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 307

Query: 452 VTIE 455
           VT+E
Sbjct: 308 VTVE 311



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 109/231 (47%), Gaps = 30/231 (12%)

Query: 203 SGDENLSAFPCLVTLN-PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +G  N    PC ++ N    ++  VA G  H+L L+  G+V+ WGY   GQ+G GS +  
Sbjct: 138 NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVN- 196

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
                PIP         R     +  V             V  IACG      + D G +
Sbjct: 197 ----QPIP--------RRVTGCLQNKV-------------VVTIACGQMCCMAVVDTGEV 231

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             +G+   GQ G G++ ++ +P  V++L GI+++ VA G  HT+ ++ +G VYA+G N +
Sbjct: 232 YVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSY 291

Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           GQLGTG    ++ P  +       +  +  +C + HT A     G V+ WG
Sbjct: 292 GQLGTGNKSNQSYPTPVTVEKDRII--EIAACHSTHTSAAKTQGGHVYMWG 340



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 56/115 (48%), Gaps = 23/115 (20%)

Query: 370 DGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR----HTAVIADDG 425
           + +++  G N  G LG G  Q+   PR LD+     ++ K ++C +     H  +   +G
Sbjct: 69  NDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS-----LNGKKIACLSYGSGPHIVLATTEG 123

Query: 426 KVFCWGWNKYGQLGLGDV--------IDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           +VF WG N Y QLG G          I  N+ ++  IE      VACG +H+L+L
Sbjct: 124 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIE------VACGSYHSLVL 172



 Score = 39.7 bits (91), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 55/133 (41%), Gaps = 17/133 (12%)

Query: 14  VFMWGYL-PGALPQRSPILSPLVVRLP--LTVGSAWRDVCGGGCGFAMAISDSRKLITWG 70
           VF WGY   G +   S +  P+  R+   L         CG  C   MA+ D+ ++  WG
Sbjct: 178 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMC--CMAVVDTGEVYVWG 235

Query: 71  STDDLGQSYVTSGKHGEIPEPFPLPTEASI--VKAAAGWAHCVAVTEGGEVYTWGWKECV 128
                G   +  G  G  P P  +     I   + A G+AH + +T+ G+VY WG     
Sbjct: 236 YN---GNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG----- 287

Query: 129 PSGRVFGDLSTGT 141
                +G L TG 
Sbjct: 288 --ANSYGQLGTGN 298


>gi|312373149|gb|EFR20956.1| hypothetical protein AND_18231 [Anopheles darlingi]
          Length = 1270

 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 164/363 (45%), Gaps = 64/363 (17%)

Query: 100 IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQV 159
           I +AA G +H + +T  G++Y+ G  +    G++  D+ +       +     +++  Q 
Sbjct: 349 IARAACGASHTLLLTNDGKMYSCGNND---HGQLGHDVESLPNKRPQLLTALENYIITQA 405

Query: 160 ---SPRSQVSRSSGGTSS-GTDGRGS-GEEGSKRRRISLAKQTAESSSSGDENLSAFPCL 214
              +  S    + G   S G++  G  G+E    R+I                    P L
Sbjct: 406 CCGTAHSLALTNWGQVYSWGSNAVGQLGQETDTTRQI-------------------IPRL 446

Query: 215 VTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESS 274
           +      ++  +AAG  H LAL++ G+++ WG    GQLGLG     VS+P     ++S 
Sbjct: 447 IRSIAAKQVVQIAAGHYHCLALTNSGELYAWGSNAYGQLGLGMTNEKVSTP---TLVQSL 503

Query: 275 YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWG--LYGQC 332
            G                    VP   +  IACGG HS  ++ +GA+  FGWG   +GQ 
Sbjct: 504 AG--------------------VP---IAFIACGGNHSFAVSKSGAI--FGWGKNTFGQL 538

Query: 333 GQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAE 392
           G    +    P  + +L  + +  V+ G   ++ +++ G V+  G   FGQLG G    E
Sbjct: 539 GLNDLNSRQFPTQLRTLRSLGVRYVSCGDDFSVFLTAGGGVFTCGAGTFGQLGHGSCNNE 598

Query: 393 TLPRLLDAPSLENVHSK--SVSCGARHT-AVIADDGKVFCWGWNKYGQLGLGDVIDRNIP 449
            LPR++     E + SK   ++CG RHT A +   GK++ +G +  GQLG+G V + N P
Sbjct: 599 ILPRMV----FELMGSKITQIACGRRHTLAFVPSRGKIYGFGLSGVGQLGIGIVGNYNTP 654

Query: 450 SQV 452
             V
Sbjct: 655 QIV 657



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 103/404 (25%), Positives = 166/404 (41%), Gaps = 56/404 (13%)

Query: 29  PILSPLVVRLPLTVG-SAWRDVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKH 85
           P L+ ++V +P  +     +++    CG    + +++  K+ + G+ D     +      
Sbjct: 328 PSLAKVMVMVPRKMDWMHAKEIARAACGASHTLLLTNDGKMYSCGNNDHGQLGHDVESLP 387

Query: 86  GEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDK 145
            + P+         I +A  G AH +A+T  G+VY+WG           G L   T   +
Sbjct: 388 NKRPQLLTALENYIITQACCGTAHSLALTNWGQVYSWG-------SNAVGQLGQETDTTR 440

Query: 146 DVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEE---GSKRR-RISLAKQTAESS 201
            +  R    L   ++ + QV + + G         SGE    GS    ++ L     + S
Sbjct: 441 QIIPR----LIRSIAAK-QVVQIAAGHYHCLALTNSGELYAWGSNAYGQLGLGMTNEKVS 495

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +         P LV    GV IA +A GG H+ A+S  G ++GWG    GQLGL      
Sbjct: 496 T---------PTLVQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDL--- 543

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
                            R       ++ S G         V+ ++CG   S  +T  G +
Sbjct: 544 ---------------NSRQFPTQLRTLRSLG---------VRYVSCGDDFSVFLTAGGGV 579

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFGGNQ 380
            T G G +GQ G GS ++E+ P  V  L+G +I  +A G  HT+  + S G +Y FG + 
Sbjct: 580 FTCGAGTFGQLGHGSCNNEILPRMVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLSG 639

Query: 381 FGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
            GQLG G       P+++  P    + + SV       A+  DD
Sbjct: 640 VGQLGIGIVGNYNTPQIVRGPWQSQILTFSVQMSEELAAIKPDD 683



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 89/172 (51%), Gaps = 12/172 (6%)

Query: 306 ACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN----CVSSLLGIQIEGVAAGL 361
           ACG  H+ ++T+ G + + G   +GQ G    D E  PN     +++L    I     G 
Sbjct: 353 ACGASHTLLLTNDGKMYSCGNNDHGQLGH---DVESLPNKRPQLLTALENYIITQACCGT 409

Query: 362 WHTICISSDGDVYAFGGNQFGQLGTGGDQA-ETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            H++ +++ G VY++G N  GQLG   D   + +PRL+ + + + V    ++ G  H   
Sbjct: 410 AHSLALTNWGQVYSWGSNAVGQLGQETDTTRQIIPRLIRSIAAKQV--VQIAAGHYHCLA 467

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDR-NIPSQVTIEGCVP-RNVACGWWHTL 470
           + + G+++ WG N YGQLGLG   ++ + P+ V     VP   +ACG  H+ 
Sbjct: 468 LTNSGELYAWGSNAYGQLGLGMTNEKVSTPTLVQSLAGVPIAFIACGGNHSF 519



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/123 (34%), Positives = 61/123 (49%), Gaps = 5/123 (4%)

Query: 353 QIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQA-ETLPRLLDAPSLENVHSKSV 411
           +I   A G  HT+ +++DG +Y+ G N  GQLG   +      P+LL A  LEN      
Sbjct: 348 EIARAACGASHTLLLTNDGKMYSCGNNDHGQLGHDVESLPNKRPQLLTA--LENYIITQA 405

Query: 412 SCGARHTAVIADDGKVFCWGWNKYGQLGL-GDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            CG  H+  + + G+V+ WG N  GQLG   D   + IP  + +I       +A G +H 
Sbjct: 406 CCGTAHSLALTNWGQVYSWGSNAVGQLGQETDTTRQIIPRLIRSIAAKQVVQIAAGHYHC 465

Query: 470 LLL 472
           L L
Sbjct: 466 LAL 468



 Score = 41.6 bits (96), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 12/97 (12%)

Query: 387 GGDQAETLPRL-----LDAPSLENVHSKSVS---CGARHTAVIADDGKVFCWGWNKYGQL 438
           G  Q E  P L     +    ++ +H+K ++   CGA HT ++ +DGK++  G N +GQL
Sbjct: 320 GPIQGEVFPSLAKVMVMVPRKMDWMHAKEIARAACGASHTLLLTNDGKMYSCGNNDHGQL 379

Query: 439 GLGDV--IDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
           G  DV  +    P  +T +E  +     CG  H+L L
Sbjct: 380 G-HDVESLPNKRPQLLTALENYIITQACCGTAHSLAL 415


>gi|259089405|ref|NP_001158608.1| probable E3 ubiquitin-protein ligase HERC6 isoform 2 [Homo sapiens]
 gi|55832764|gb|AAV66895.1| HERC6 splice variant [Homo sapiens]
          Length = 986

 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 121/256 (47%), Gaps = 40/256 (15%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  V+ G  H+LA+   G+V+ WG G EGQLG+G    +  +P  I  +           
Sbjct: 77  VDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTL----------- 125

Query: 283 LSRGSVNSEGPGFRVPGNYVKGI--ACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DD 339
                            N +K I  +CG  HS  ++    + ++G   +GQ G G     
Sbjct: 126 -----------------NDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPS 168

Query: 340 ELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLD 399
           + SP  V SL GI +  VAAG  H+  +S  G  + +G N  GQL   G     +P   +
Sbjct: 169 QASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSG---RNVPVQSN 225

Query: 400 AP----SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-I 454
            P    +L+N+    +SCG  HTAV+  DGKVF +G N+ GQLG     ++  P  V  I
Sbjct: 226 KPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERI 285

Query: 455 EGCVPRNVACGWWHTL 470
           +G V + + CG +HTL
Sbjct: 286 DGLVSQ-IDCGSYHTL 300



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 84/298 (28%), Positives = 125/298 (41%), Gaps = 47/298 (15%)

Query: 83  GKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTG 142
            + GE+PEP        +   + G  H +AV   G V+ WG      +G    +   G G
Sbjct: 60  AQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWG------AG---SEGQLGIG 110

Query: 143 LDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRI-SLAKQTAESS 201
             K++     SF     +P+  ++ +       + G       SK  ++ S  K +    
Sbjct: 111 EFKEI-----SF-----TPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQL 160

Query: 202 SSGDENLS-AFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR 260
             G E  S A P  V    G+ +A VAAGG H+ ALS  G  +GWG    GQL L  R  
Sbjct: 161 GLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNV 220

Query: 261 MVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA 320
            V S  P               LS G++ + G         V  I+CG  H+AV+T  G 
Sbjct: 221 PVQSNKP---------------LSVGALKNLG---------VVYISCGDAHTAVLTQDGK 256

Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFG 377
           + TFG    GQ G   T ++  P  V  + G+ +  +  G +HT+  + + G V +FG
Sbjct: 257 VFTFGDNRSGQLGYSPTPEKRGPQLVERIDGL-VSQIDCGSYHTLAYVHTTGQVVSFG 313



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 41/125 (32%), Positives = 66/125 (52%), Gaps = 4/125 (3%)

Query: 351 GIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
           G ++   A+G  H++ + ++  V + G N  GQLG  G Q   LP  + A  LE +    
Sbjct: 22  GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQA--LETLIVDL 79

Query: 411 VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNI-PSQV-TIEGCVPRNVACGWWH 468
           VSCG  H+  +   G+VF WG    GQLG+G+  + +  P ++ T+       V+CG +H
Sbjct: 80  VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYH 139

Query: 469 TLLLA 473
           +L L+
Sbjct: 140 SLALS 144


>gi|219847606|ref|YP_002462039.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
           9485]
 gi|219541865|gb|ACL23603.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
           DSM 9485]
          Length = 784

 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 90/274 (32%), Positives = 122/274 (44%), Gaps = 29/274 (10%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSS------PHPIPCIESSY- 275
           +  +AAGG HT AL   G VW WGY   GQLG GS I  ++       P  +  I + Y 
Sbjct: 164 VTAIAAGGAHTCALMSSGGVWCWGYNLSGQLGDGSTIYHITPVAVSGLPSEVTAIAAGYA 223

Query: 276 --------------GKDRSAALSRGSVNSEGPGFRVPG--NYVKGIACGGRHSAVITDAG 319
                         G +    L  GS         V G  + V  IA GGR++  +T +G
Sbjct: 224 HTCALTGSGGVWCWGDNGFGQLGDGSFTDSSTPAAVGGLPSGVTAIAAGGRYTCALTSSG 283

Query: 320 ALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN 379
            +  +G    GQ G GS  +  +P  V  L    +  +AAG  HT  ++S G V+ +GGN
Sbjct: 284 GVWCWGRNDSGQLGDGSFTNRSTPGAVGGLP-SGVTAIAAGGAHTCALTSSGGVWCWGGN 342

Query: 380 QFGQLGTGGDQAETLPRLLDA-PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
             GQLG G     + P  +   PS       +++ G  HT      G V+CWG N YGQL
Sbjct: 343 DSGQLGDGSYTDRSTPGAVSGLPS----GVTAIAAGGAHTCARTSSGGVWCWGGNFYGQL 398

Query: 439 GLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           G G   DR+ P  V+        +A G +HT  L
Sbjct: 399 GDGTTTDRSTPGAVSGLPSGVTAIAAGNYHTCAL 432



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/262 (31%), Positives = 119/262 (45%), Gaps = 31/262 (11%)

Query: 216 TLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSY 275
           + +P   +  +AAG  HT AL+  G+VW WGY   GQLG GS     S+P  +  + S  
Sbjct: 55  SFSPLQGVTAIAAGSWHTCALTGSGEVWCWGYNWSGQLGDGSYTDR-STPVAVSGLPSGV 113

Query: 276 GKDRSAALSRGSVNSEGPGFRVPGNY------------------------VKGIACGGRH 311
               +      ++ S G      GNY                        V  IA GG H
Sbjct: 114 TAIAAGGAHTCALTSSGGVMCWGGNYFGQLGDGSYTDRSTPVAVSGLPSGVTAIAAGGAH 173

Query: 312 SAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDG 371
           +  +  +G +  +G+ L GQ G GST   ++P  VS L   ++  +AAG  HT  ++  G
Sbjct: 174 TCALMSSGGVWCWGYNLSGQLGDGSTIYHITPVAVSGLP-SEVTAIAAGYAHTCALTGSG 232

Query: 372 DVYAFGGNQFGQLGTGGDQAETLPRLLDA-PSLENVHSKSVSCGARHTAVIADDGKVFCW 430
            V+ +G N FGQLG G     + P  +   PS       +++ G R+T  +   G V+CW
Sbjct: 233 GVWCWGDNGFGQLGDGSFTDSSTPAAVGGLPS----GVTAIAAGGRYTCALTSSGGVWCW 288

Query: 431 GWNKYGQLGLGDVIDRNIPSQV 452
           G N  GQLG G   +R+ P  V
Sbjct: 289 GRNDSGQLGDGSFTNRSTPGAV 310



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 116/397 (29%), Positives = 166/397 (41%), Gaps = 50/397 (12%)

Query: 100 IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQV 159
           +   AAG AH  A+T  G V  WG       G  FG L  G+  D+      S   +   
Sbjct: 113 VTAIAAGGAHTCALTSSGGVMCWG-------GNYFGQLGDGSYTDRSTPVAVSGLPSGVT 165

Query: 160 SPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
           +  +  + +    SSG         G      +L+ Q  +    G       P  V+  P
Sbjct: 166 AIAAGGAHTCALMSSG---------GVWCWGYNLSGQLGD----GSTIYHITPVAVSGLP 212

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR---------------IRMVSS 264
              +  +AAG  HT AL+  G VW WG  G GQLG GS                +  +++
Sbjct: 213 -SEVTAIAAGYAHTCALTGSGGVWCWGDNGFGQLGDGSFTDSSTPAAVGGLPSGVTAIAA 271

Query: 265 PHPIPCIESS------YGKDRSAALSRGSVNSEGPGFRVPG--NYVKGIACGGRHSAVIT 316
                C  +S      +G++ S  L  GS  +      V G  + V  IA GG H+  +T
Sbjct: 272 GGRYTCALTSSGGVWCWGRNDSGQLGDGSFTNRSTPGAVGGLPSGVTAIAAGGAHTCALT 331

Query: 317 DAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAF 376
            +G +  +G    GQ G GS  D  +P  VS L    +  +AAG  HT   +S G V+ +
Sbjct: 332 SSGGVWCWGGNDSGQLGDGSYTDRSTPGAVSGLP-SGVTAIAAGGAHTCARTSSGGVWCW 390

Query: 377 GGNQFGQLGTGGDQAETLPRLLDA-PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKY 435
           GGN +GQLG G     + P  +   PS       +++ G  HT  +     V+CWG N Y
Sbjct: 391 GGNFYGQLGDGTTTDRSTPGAVSGLPS----GVTAIAAGNYHTCALTGSDGVWCWGDNFY 446

Query: 436 GQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           GQLG G   +R+ P  V+        +A G +HT  L
Sbjct: 447 GQLGDGTTTNRSTPGAVSGLPSGVTAIAAGNYHTCAL 483



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 120/440 (27%), Positives = 180/440 (40%), Gaps = 56/440 (12%)

Query: 59  AISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKA-AAGWAHCVAVTEGG 117
           A++ S  +  WG  +D GQ  +  G + +   P  +    S V A AAG AH  A T  G
Sbjct: 329 ALTSSGGVWCWGG-NDSGQ--LGDGSYTDRSTPGAVSGLPSGVTAIAAGGAHTCARTSSG 385

Query: 118 EVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTD 177
            V+ WG       G  +G L  GT  D+      S        P    + ++G   +   
Sbjct: 386 GVWCWG-------GNFYGQLGDGTTTDRSTPGAVSGL------PSGVTAIAAGNYHTCAL 432

Query: 178 GRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS 237
              +G +G      +   Q  + +++      A   L +      +  +AAG  HT AL+
Sbjct: 433 ---TGSDGVWCWGDNFYGQLGDGTTTNRSTPGAVSGLPS-----GVTAIAAGNYHTCALT 484

Query: 238 DIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESS----------------------Y 275
             G VW WG    GQLG G+     S+P  +  + S                       +
Sbjct: 485 SSGGVWCWGRNDSGQLGDGTTTNR-STPGAVGGLPSGVTAIAAGDYHTCALMSSGGVWCW 543

Query: 276 GKDRSAALSRGSVNSEGPGFRVPG--NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCG 333
           G +    L  GS         V G  + V  IA G  H+  +T +  +  +G    GQ G
Sbjct: 544 GLNNRGQLGDGSYTDSSTPVAVGGLPSGVMAIAAGNYHTCALTGSDGVWCWGTNSDGQLG 603

Query: 334 QGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAET 393
            G+T +  +P  VS L    +  +AAG +HT  ++S G V+ +G N  GQLG G     +
Sbjct: 604 DGTTTNRSTPVAVSGLP-SGVTAIAAGNYHTCALTSSGGVWCWGYNLSGQLGDGTTTNRS 662

Query: 394 LPRLLDA-PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
            P  +   PS       +++ G  HT  +   G V+CWG N YGQLG G   +R+ P  V
Sbjct: 663 TPGAVSGLPS----GVTAIAAGDEHTCALTGSGGVWCWGDNYYGQLGDGTTTNRSTPGAV 718

Query: 453 TIEGCVPRNVACGWWHTLLL 472
           +        +A G +HT  L
Sbjct: 719 SGLPSGVTAIAAGVYHTCAL 738



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 112/254 (44%), Gaps = 29/254 (11%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR---------------IRMVSSPHP 267
           +  +AAG  HT AL   G VW WG    GQLG GS                +  +++ + 
Sbjct: 521 VTAIAAGDYHTCALMSSGGVWCWGLNNRGQLGDGSYTDSSTPVAVGGLPSGVMAIAAGNY 580

Query: 268 IPCIESS------YGKDRSAALSRGSVNSEGPGFRVPG--NYVKGIACGGRHSAVITDAG 319
             C  +       +G +    L  G+  +      V G  + V  IA G  H+  +T +G
Sbjct: 581 HTCALTGSDGVWCWGTNSDGQLGDGTTTNRSTPVAVSGLPSGVTAIAAGNYHTCALTSSG 640

Query: 320 ALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN 379
            +  +G+ L GQ G G+T +  +P  VS L    +  +AAG  HT  ++  G V+ +G N
Sbjct: 641 GVWCWGYNLSGQLGDGTTTNRSTPGAVSGLP-SGVTAIAAGDEHTCALTGSGGVWCWGDN 699

Query: 380 QFGQLGTGGDQAETLPRLLDA-PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
            +GQLG G     + P  +   PS       +++ G  HT  +   G V CWG N  GQL
Sbjct: 700 YYGQLGDGTTTNRSTPGAVSGLPS----GVTAIAAGVYHTCALTGSGGVMCWGNNGDGQL 755

Query: 439 GLGDVIDRNIPSQV 452
           G G  + R  P  V
Sbjct: 756 GDGRPLYRTTPVDV 769


>gi|444732065|gb|ELW72388.1| RCC1 and BTB domain-containing protein 2 [Tupaia chinensis]
          Length = 527

 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 64/176 (36%), Positives = 103/176 (58%), Gaps = 7/176 (3%)

Query: 303 KGIAC----GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS-LLGIQIEGV 357
           K IAC     G H  + T  G + T+G   Y Q G G+T+  L P  +S+ L   Q+  V
Sbjct: 74  KKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV 133

Query: 358 AAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARH 417
           A G +H++ ++SDG+V+A+G N  GQ+G+G    + +PR +    L+N    +++CG   
Sbjct: 134 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTG-CLQNKVVVNIACGQMC 192

Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
           +  + D G+V+ WG+N  GQLGLG   ++  P +V+ ++G   + VACG+ HTL+L
Sbjct: 193 SMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVSALQGIRVQRVACGYAHTLVL 248



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 73/233 (31%), Positives = 114/233 (48%), Gaps = 34/233 (14%)

Query: 203 SGDENLSAFPCLVTLN-PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +G  N    PC ++ N    ++  VA G  H+L L+  G+V+ WGY   GQ+G GS    
Sbjct: 109 NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---- 164

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
            ++  PIP         R     +  V             V  IACG   S  + D G +
Sbjct: 165 -TANQPIP--------RRVTGCLQNKV-------------VVNIACGQMCSMAVVDTGEV 202

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             +G+   GQ G GS+ ++ +P  VS+L GI+++ VA G  HT+ ++ +G VYA+G N +
Sbjct: 203 YVWGYNGNGQLGLGSSGNQPTPCRVSALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSY 262

Query: 382 GQLGTGG--DQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           GQLGTG   +Q+   P +++   +  +     +C + HT A     G V+ WG
Sbjct: 263 GQLGTGNKSNQSYPTPVVVEKDRIIEI----AACHSAHTSAAKTQGGHVYMWG 311



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 118/238 (49%), Gaps = 30/238 (12%)

Query: 220 GVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
           G +IA ++ G G H +  +  G+V+ WG+    QLG G+     ++   +PC  S+    
Sbjct: 73  GKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLGNGT-----TNHGLVPCHIST---- 123

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
                             +    V  +ACG  HS V+T  G +  +G+   GQ G GST 
Sbjct: 124 -----------------NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTA 166

Query: 339 DELSPNCVSSLLGIQIE-GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
           ++  P  V+  L  ++   +A G   ++ +   G+VY +G N  GQLG G    +  P  
Sbjct: 167 NQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCR 226

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
           + A  L+ +  + V+CG  HT V+ D+G+V+ WG N YGQLG G+  +++ P+ V +E
Sbjct: 227 VSA--LQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVVE 282



 Score = 38.5 bits (88), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 55/133 (41%), Gaps = 17/133 (12%)

Query: 14  VFMWGYL-PGALPQRSPILSPLVVRLP--LTVGSAWRDVCGGGCGFAMAISDSRKLITWG 70
           VF WGY   G +   S    P+  R+   L         CG  C  +MA+ D+ ++  WG
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMC--SMAVVDTGEVYVWG 206

Query: 71  STDDLGQSYVTSGKHGEIPEPFPLPTEASI--VKAAAGWAHCVAVTEGGEVYTWGWKECV 128
                G   +  G  G  P P  +     I   + A G+AH + +T+ G+VY WG     
Sbjct: 207 YN---GNGQLGLGSSGNQPTPCRVSALQGIRVQRVACGYAHTLVLTDEGQVYAWG----- 258

Query: 129 PSGRVFGDLSTGT 141
                +G L TG 
Sbjct: 259 --ANSYGQLGTGN 269


>gi|61563742|ref|NP_060382.3| probable E3 ubiquitin-protein ligase HERC6 isoform 1 [Homo sapiens]
 gi|74750679|sp|Q8IVU3.2|HERC6_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC6; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           6
 gi|48686728|gb|AAQ14893.1|AF336798_1 HERC6 [Homo sapiens]
 gi|66840150|gb|AAH42047.2| Hect domain and RLD 6 [Homo sapiens]
 gi|194381386|dbj|BAG58647.1| unnamed protein product [Homo sapiens]
          Length = 1022

 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 121/256 (47%), Gaps = 40/256 (15%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  V+ G  H+LA+   G+V+ WG G EGQLG+G    +  +P  I  +           
Sbjct: 77  VDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTL----------- 125

Query: 283 LSRGSVNSEGPGFRVPGNYVKGI--ACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DD 339
                            N +K I  +CG  HS  ++    + ++G   +GQ G G     
Sbjct: 126 -----------------NDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPS 168

Query: 340 ELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLD 399
           + SP  V SL GI +  VAAG  H+  +S  G  + +G N  GQL   G     +P   +
Sbjct: 169 QASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSG---RNVPVQSN 225

Query: 400 AP----SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-I 454
            P    +L+N+    +SCG  HTAV+  DGKVF +G N+ GQLG     ++  P  V  I
Sbjct: 226 KPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERI 285

Query: 455 EGCVPRNVACGWWHTL 470
           +G V + + CG +HTL
Sbjct: 286 DGLVSQ-IDCGSYHTL 300



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 84/298 (28%), Positives = 125/298 (41%), Gaps = 47/298 (15%)

Query: 83  GKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTG 142
            + GE+PEP        +   + G  H +AV   G V+ WG      +G    +   G G
Sbjct: 60  AQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWG------AG---SEGQLGIG 110

Query: 143 LDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRI-SLAKQTAESS 201
             K++     SF     +P+  ++ +       + G       SK  ++ S  K +    
Sbjct: 111 EFKEI-----SF-----TPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQL 160

Query: 202 SSGDENLS-AFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR 260
             G E  S A P  V    G+ +A VAAGG H+ ALS  G  +GWG    GQL L  R  
Sbjct: 161 GLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNV 220

Query: 261 MVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA 320
            V S  P               LS G++ + G         V  I+CG  H+AV+T  G 
Sbjct: 221 PVQSNKP---------------LSVGALKNLG---------VVYISCGDAHTAVLTQDGK 256

Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFG 377
           + TFG    GQ G   T ++  P  V  + G+ +  +  G +HT+  + + G V +FG
Sbjct: 257 VFTFGDNRSGQLGYSPTPEKRGPQLVERIDGL-VSQIDCGSYHTLAYVHTTGQVVSFG 313



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 41/125 (32%), Positives = 66/125 (52%), Gaps = 4/125 (3%)

Query: 351 GIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
           G ++   A+G  H++ + ++  V + G N  GQLG  G Q   LP  + A  LE +    
Sbjct: 22  GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQA--LETLIVDL 79

Query: 411 VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNI-PSQV-TIEGCVPRNVACGWWH 468
           VSCG  H+  +   G+VF WG    GQLG+G+  + +  P ++ T+       V+CG +H
Sbjct: 80  VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYH 139

Query: 469 TLLLA 473
           +L L+
Sbjct: 140 SLALS 144


>gi|21619468|gb|AAH31624.1| RPGR protein [Homo sapiens]
 gi|119579847|gb|EAW59443.1| retinitis pigmentosa GTPase regulator, isoform CRA_c [Homo sapiens]
 gi|325464495|gb|ADZ16018.1| retinitis pigmentosa GTPase regulator [synthetic construct]
          Length = 480

 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 96/297 (32%), Positives = 139/297 (46%), Gaps = 43/297 (14%)

Query: 213 CLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR--------IRMVSS 264
           C+  L P  ++   A G  HTL  ++ G V+  G   EGQLGLG          I   +S
Sbjct: 80  CVKALKPE-KVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTS 138

Query: 265 PHPIPCIESSYGKDRSAALSRGSV------NSEG------------PGFRVPGNYVKGIA 306
            H I   + S G + SAAL+          NSEG            P     G  V  I+
Sbjct: 139 EHKIK--QLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWIS 196

Query: 307 CGGRHSAVITDAGALLTFGWGLYGQCGQGST--DDELSPNCVSSLLGIQIEGVAAGLWHT 364
           CG  HSA +T  G L  FG    G+ G  +    +  +P  VS +    I+ VA G  HT
Sbjct: 197 CGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVIQ-VACGGEHT 255

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS---VSCGARHTAVI 421
           + ++ +  VY FG  QFGQLG G    ET     +   +EN+  ++   +SCG  HTA+I
Sbjct: 256 VVLTENA-VYTFGLGQFGQLGLGTFLFET----SEPKVIENIRDQTISYISCGENHTALI 310

Query: 422 ADDGKVFCWGWNKYGQLGLG--DVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLAVP 475
            D G ++ +G  ++G+LGLG  +  +  IP+  +     + + VACG  H ++ A P
Sbjct: 311 TDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVFAAP 367



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 60/169 (35%), Positives = 93/169 (55%), Gaps = 2/169 (1%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           ++CG  HSAV+T    L  FG   +GQ G GS      P CV +L   +++  A G  HT
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHT 99

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           +  +  G+VYA GGN  GQLG G  +      ++   + E+   K +S G+  +A + +D
Sbjct: 100 LVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEH-KIKQLSAGSNTSAALTED 158

Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           G++F WG N  GQ+GL +V +  +P QVTI   V   ++CG++H+  + 
Sbjct: 159 GRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSW-ISCGYYHSAFVT 206



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 86/328 (26%), Positives = 137/328 (41%), Gaps = 62/328 (18%)

Query: 103 AAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPR 162
           AA G  H +  TEGG VY  G       G   G L  G   +++ F   S F +E     
Sbjct: 92  AACGRNHTLVSTEGGNVYATG-------GNNEGQLGLGDTEERNTFHVISFFTSEH--KI 142

Query: 163 SQVSRSSGGTSSGT-DGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTL 217
            Q+S  S  +++ T DGR    G   EG                  G +N+S       +
Sbjct: 143 KQLSAGSNTSAALTEDGRLFMWGDNSEG----------------QIGLKNVSNVCVPQQV 186

Query: 218 NPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
             G  ++ ++ G  H+  ++  G+++ +G    G+LGL +++                G 
Sbjct: 187 TIGKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQL---------------LGN 231

Query: 278 DRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST 337
            R+  L             +P   ++ +ACGG H+ V+T+  A+ TFG G +GQ G G+ 
Sbjct: 232 HRTPQLVS----------EIPEKVIQ-VACGGEHTVVLTE-NAVYTFGLGQFGQLGLGTF 279

Query: 338 DDELS-PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAET--L 394
             E S P  + ++    I  ++ G  HT  I+  G +Y FG  + G+LG G +      +
Sbjct: 280 LFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFI 339

Query: 395 PRLLDAPSLENVHSKSVSCGARHTAVIA 422
           P L    +      K V+CG  H  V A
Sbjct: 340 PTL--CSNFLRFIVKLVACGGCHMVVFA 365



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/279 (22%), Positives = 122/279 (43%), Gaps = 38/279 (13%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
           ++ G  H+  ++   +++ +G    GQLGLGS+   +S P  +  ++    K  +   + 
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSK-SAISKPTCVKALKPEKVKLAACGRNH 98

Query: 286 GSVNSEG---------------------------PGFRVPGNYVKGIACGGRHSAVITDA 318
             V++EG                             F    + +K ++ G   SA +T+ 
Sbjct: 99  TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTED 158

Query: 319 GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           G L  +G    GQ G  +  +   P  V+  +G  +  ++ G +H+  +++DG++Y FG 
Sbjct: 159 GRLFMWGDNSEGQIGLKNVSNVCVPQQVT--IGKPVSWISCGYYHSAFVTTDGELYVFGE 216

Query: 379 NQFGQLGTGGDQA--ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYG 436
            + G+LG           P+L+     + +    V+CG  HT V+ ++  V+ +G  ++G
Sbjct: 217 PENGKLGLPNQLLGNHRTPQLVSEIPEKVIQ---VACGGEHTVVLTENA-VYTFGLGQFG 272

Query: 437 QLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLA 473
           QLGLG  +      +V   I       ++CG  HT L+ 
Sbjct: 273 QLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALIT 311


>gi|397480406|ref|XP_003811475.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2 [Pan
           paniscus]
 gi|426375451|ref|XP_004054552.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 3
           [Gorilla gorilla gorilla]
 gi|194376922|dbj|BAG63022.1| unnamed protein product [Homo sapiens]
          Length = 556

 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 84/282 (29%), Positives = 138/282 (48%), Gaps = 22/282 (7%)

Query: 208 LSAFPCLVTL-NPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGL----------G 256
           +SA P  + L NP  ++         +L + D+G+   +    E +L L          G
Sbjct: 1   MSALPRDLELSNPREKLTKPVQATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAG 60

Query: 257 SRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIAC----GGRHS 312
           + +   +    I  +    G +    L  G V S     R+     K IAC     G H 
Sbjct: 61  NEVLYTTVNDEIFVL----GTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHI 116

Query: 313 AVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS-LLGIQIEGVAAGLWHTICISSDG 371
            + T  G + T+G   Y Q G G+T+  L P  +S+ L   Q+  VA G +H++ ++SDG
Sbjct: 117 VLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDG 176

Query: 372 DVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWG 431
           +V+A+G N  GQ+G+G    + +PR +    L+N    +++CG      + D G+V+ WG
Sbjct: 177 EVFAWGYNNSGQVGSGSTVNQPIPRRVTG-CLQNKVVVTIACGQMCCMAVVDTGEVYVWG 235

Query: 432 WNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
           +N  GQLGLG+  ++  P +V  ++G   + VACG+ HTL+L
Sbjct: 236 YNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 277



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 126/259 (48%), Gaps = 32/259 (12%)

Query: 214 LVTLNPGVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIE 272
           L +LN G +IA ++ G G H +  +  G+V+ WG+    QLG G+     ++   +PC  
Sbjct: 97  LDSLN-GKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT-----TNHGLVPCHI 150

Query: 273 SSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQC 332
           S+                      +    V  +ACG  HS V+T  G +  +G+   GQ 
Sbjct: 151 ST---------------------NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQV 189

Query: 333 GQGSTDDELSPNCVSSLLGIQIE-GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
           G GST ++  P  V+  L  ++   +A G    + +   G+VY +G N  GQLG G    
Sbjct: 190 GSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGN 249

Query: 392 ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
           +  P      +L+ +  + V+CG  HT V+ D+G+V+ WG N YGQLG G+  +++ P+ 
Sbjct: 250 QPTP--CRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 307

Query: 452 VTIE-GCVPRNVACGWWHT 469
           VT+E   +    AC   HT
Sbjct: 308 VTVEKDRIIEIAACHSTHT 326



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 109/231 (47%), Gaps = 30/231 (12%)

Query: 203 SGDENLSAFPCLVTLN-PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +G  N    PC ++ N    ++  VA G  H+L L+  G+V+ WGY   GQ+G GS +  
Sbjct: 138 NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVN- 196

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
                PIP         R     +  V             V  IACG      + D G +
Sbjct: 197 ----QPIP--------RRVTGCLQNKV-------------VVTIACGQMCCMAVVDTGEV 231

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             +G+   GQ G G++ ++ +P  V++L GI+++ VA G  HT+ ++ +G VYA+G N +
Sbjct: 232 YVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSY 291

Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           GQLGTG    ++ P  +       +  +  +C + HT A     G V+ WG
Sbjct: 292 GQLGTGNKSNQSYPTPVTVEKDRII--EIAACHSTHTSAAKTQGGHVYMWG 340



 Score = 39.3 bits (90), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 55/133 (41%), Gaps = 17/133 (12%)

Query: 14  VFMWGYL-PGALPQRSPILSPLVVRLP--LTVGSAWRDVCGGGCGFAMAISDSRKLITWG 70
           VF WGY   G +   S +  P+  R+   L         CG  C   MA+ D+ ++  WG
Sbjct: 178 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMC--CMAVVDTGEVYVWG 235

Query: 71  STDDLGQSYVTSGKHGEIPEPFPLPTEASI--VKAAAGWAHCVAVTEGGEVYTWGWKECV 128
                G   +  G  G  P P  +     I   + A G+AH + +T+ G+VY WG     
Sbjct: 236 YN---GNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG----- 287

Query: 129 PSGRVFGDLSTGT 141
                +G L TG 
Sbjct: 288 --ANSYGQLGTGN 298


>gi|194040610|ref|XP_001928937.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1 [Sus
           scrofa]
          Length = 568

 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 63/176 (35%), Positives = 102/176 (57%), Gaps = 7/176 (3%)

Query: 303 KGIAC----GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS-LLGIQIEGV 357
           K IAC     G H  + T  G + T+G   Y Q G G+T+  L P  +S+ L   Q+  V
Sbjct: 115 KKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV 174

Query: 358 AAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARH 417
           A G +H++ ++SDG+V+A+G N  GQ+G+G    + +PR +    L+N    +++CG   
Sbjct: 175 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTG-CLQNKTVVNIACGQMC 233

Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
           +  + D G+V+ WG+N  GQLGLG   ++  P ++  ++G   + VACG+ HTL+L
Sbjct: 234 SMAVVDTGEVYVWGYNGNGQLGLGSGGNQPTPCRIAALQGIRVQRVACGYAHTLVL 289



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 125/255 (49%), Gaps = 35/255 (13%)

Query: 220 GVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
           G +IA ++ G G H +  +  G+V+ WG+    QLG G+     ++   +PC  S+    
Sbjct: 114 GKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLGNGT-----TNHGLVPCHIST---- 164

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
                             +    V  +ACG  HS V+T  G +  +G+   GQ G GST 
Sbjct: 165 -----------------NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTA 207

Query: 339 DELSPNCVSSLLGIQ-IEGVAAGLWHTICISSDGDVYAFGGNQFGQLG--TGGDQAETLP 395
           ++  P  V+  L  + +  +A G   ++ +   G+VY +G N  GQLG  +GG+Q    P
Sbjct: 208 NQPIPRRVTGCLQNKTVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSGGNQ----P 263

Query: 396 RLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
                 +L+ +  + V+CG  HT V+ D+G+V+ WG N YGQLG G+  +++ P+ V +E
Sbjct: 264 TPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVIVE 323

Query: 456 -GCVPRNVACGWWHT 469
              +    AC   HT
Sbjct: 324 KDRIIEIAACHSAHT 338



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 114/233 (48%), Gaps = 34/233 (14%)

Query: 203 SGDENLSAFPCLVTLN-PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +G  N    PC ++ N    ++  VA G  H+L L+  G+V+ WGY   GQ+G GS    
Sbjct: 150 NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---- 205

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
            ++  PIP       +  +  L   +V                IACG   S  + D G +
Sbjct: 206 -TANQPIP-------RRVTGCLQNKTV--------------VNIACGQMCSMAVVDTGEV 243

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             +G+   GQ G GS  ++ +P  +++L GI+++ VA G  HT+ ++ +G VYA+G N +
Sbjct: 244 YVWGYNGNGQLGLGSGGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSY 303

Query: 382 GQLGTGG--DQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           GQLGTG   +Q+   P +++   +  +     +C + HT A     G V+ WG
Sbjct: 304 GQLGTGNKSNQSYPTPVIVEKDRIIEI----AACHSAHTSAAKTQGGHVYMWG 352



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 15/111 (13%)

Query: 370 DGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFC 429
           + +++  G N  G LG G  Q+   PR LD+ S + +   S   G  H  +   +G+VF 
Sbjct: 81  NDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGP-HVVLATTEGEVFT 139

Query: 430 WGWNKYGQLGLGDV--------IDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           WG N Y QLG G          I  N+ ++  IE      VACG +H+L+L
Sbjct: 140 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIE------VACGSYHSLVL 184



 Score = 40.0 bits (92), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 57/131 (43%), Gaps = 13/131 (9%)

Query: 14  VFMWGYL-PGALPQRSPILSPLVVRLP--LTVGSAWRDVCGGGCGFAMAISDSRKLITWG 70
           VF WGY   G +   S    P+  R+   L   +     CG  C  +MA+ D+ ++  WG
Sbjct: 190 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKTVVNIACGQMC--SMAVVDTGEVYVWG 247

Query: 71  STDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPS 130
              + GQ  + SG +   P          + + A G+AH + +T+ G+VY WG       
Sbjct: 248 YNGN-GQLGLGSGGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWG------- 299

Query: 131 GRVFGDLSTGT 141
              +G L TG 
Sbjct: 300 ANSYGQLGTGN 310


>gi|119626424|gb|EAX06019.1| hect domain and RLD 6, isoform CRA_b [Homo sapiens]
          Length = 1028

 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 121/256 (47%), Gaps = 40/256 (15%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  V+ G  H+LA+   G+V+ WG G EGQLG+G    +  +P  I  +           
Sbjct: 77  VDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTL----------- 125

Query: 283 LSRGSVNSEGPGFRVPGNYVKGI--ACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DD 339
                            N +K I  +CG  HS  ++    + ++G   +GQ G G     
Sbjct: 126 -----------------NDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPS 168

Query: 340 ELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLD 399
           + SP  V SL GI +  VAAG  H+  +S  G  + +G N  GQL   G     +P   +
Sbjct: 169 QASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSG---RNVPVQSN 225

Query: 400 AP----SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-I 454
            P    +L+N+    +SCG  HTAV+  DGKVF +G N+ GQLG     ++  P  V  I
Sbjct: 226 KPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERI 285

Query: 455 EGCVPRNVACGWWHTL 470
           +G V + + CG +HTL
Sbjct: 286 DGLVSQ-IDCGSYHTL 300



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 84/298 (28%), Positives = 125/298 (41%), Gaps = 47/298 (15%)

Query: 83  GKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTG 142
            + GE+PEP        +   + G  H +AV   G V+ WG      +G    +   G G
Sbjct: 60  AQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWG------AG---SEGQLGIG 110

Query: 143 LDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRI-SLAKQTAESS 201
             K++     SF     +P+  ++ +       + G       SK  ++ S  K +    
Sbjct: 111 EFKEI-----SF-----TPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQL 160

Query: 202 SSGDENLS-AFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR 260
             G E  S A P  V    G+ +A VAAGG H+ ALS  G  +GWG    GQL L  R  
Sbjct: 161 GLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNV 220

Query: 261 MVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA 320
            V S  P               LS G++ + G         V  I+CG  H+AV+T  G 
Sbjct: 221 PVQSNKP---------------LSVGALKNLG---------VVYISCGDAHTAVLTQDGK 256

Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFG 377
           + TFG    GQ G   T ++  P  V  + G+ +  +  G +HT+  + + G V +FG
Sbjct: 257 VFTFGDNRSGQLGYSPTPEKRGPQLVERIDGL-VSQIDCGSYHTLAYVHTTGQVVSFG 313



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 41/125 (32%), Positives = 66/125 (52%), Gaps = 4/125 (3%)

Query: 351 GIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
           G ++   A+G  H++ + ++  V + G N  GQLG  G Q   LP  + A  LE +    
Sbjct: 22  GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQA--LETLIVDL 79

Query: 411 VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNI-PSQV-TIEGCVPRNVACGWWH 468
           VSCG  H+  +   G+VF WG    GQLG+G+  + +  P ++ T+       V+CG +H
Sbjct: 80  VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYH 139

Query: 469 TLLLA 473
           +L L+
Sbjct: 140 SLALS 144


>gi|354485549|ref|XP_003504946.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like
           [Cricetulus griseus]
          Length = 887

 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 81/253 (32%), Positives = 121/253 (47%), Gaps = 34/253 (13%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  H++A+   G+V+ WG G EGQLG+G    +   P  I  +           
Sbjct: 75  IDLVSCGKEHSIAVCHKGRVFAWGAGSEGQLGIGEFKEINLMPMRIKTL----------- 123

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDEL 341
                           G  +  ++CG  HS  +++ G + ++G    GQ G G  +  + 
Sbjct: 124 ---------------GGIKIIQVSCGHYHSLALSEDGQVFSWGKNSQGQLGLGMQSSSQA 168

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAE---TLPRLL 398
           SP  V+SL GI +  VAAG  H+  +S  G  Y +G N  GQL   G+ +    + P  +
Sbjct: 169 SPQKVTSLEGIPLAQVAAGGSHSFALSLTGTSYGWGSNSVGQLALSGENSTVQISKPHSI 228

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGC 457
           DA  L+N+    +SCG  HTAV+  DG+VF +G N  GQL       R  P  V  I+G 
Sbjct: 229 DA--LKNLGVIYISCGYEHTAVLTKDGQVFTFGDNSSGQLQNNPRGKRRGPQLVEGIKGQ 286

Query: 458 VPRNVACGWWHTL 470
           V + + CG +HT+
Sbjct: 287 VSK-IECGSYHTI 298



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 65/232 (28%), Positives = 106/232 (45%), Gaps = 37/232 (15%)

Query: 206 ENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSP 265
           + ++  P  +    G++I  V+ G  H+LALS+ GQV+ WG   +GQLGLG +    +SP
Sbjct: 111 KEINLMPMRIKTLGGIKIIQVSCGHYHSLALSEDGQVFSWGKNSQGQLGLGMQSSSQASP 170

Query: 266 HPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFG 325
             +  +E                          G  +  +A GG HS  ++  G   ++G
Sbjct: 171 QKVTSLE--------------------------GIPLAQVAAGGSHSFALSLTGT--SYG 202

Query: 326 WG--LYGQC---GQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
           WG    GQ    G+ ST     P+ + +L  + +  ++ G  HT  ++ DG V+ FG N 
Sbjct: 203 WGSNSVGQLALSGENSTVQISKPHSIDALKNLGVIYISCGYEHTAVLTKDGQVFTFGDNS 262

Query: 381 FGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
            GQL          P+L++   ++   SK + CG+ HT A +   G+V   G
Sbjct: 263 SGQLQNNPRGKRRGPQLVEG--IKGQVSK-IECGSYHTIAYVYTTGQVVSLG 311



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/172 (32%), Positives = 86/172 (50%), Gaps = 5/172 (2%)

Query: 306 ACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTI 365
           A G RHS ++     + + G    GQ GQ    +   P  + +L  + I+ V+ G  H+I
Sbjct: 27  ASGERHSLLLFSNHRVYSCGDNSLGQLGQKREQNTEQPEPIQALGTLDIDLVSCGKEHSI 86

Query: 366 CISSDGDVYAFGGNQFGQLGTGG-DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
            +   G V+A+G    GQLG G   +   +P  +   +L  +    VSCG  H+  +++D
Sbjct: 87  AVCHKGRVFAWGAGSEGQLGIGEFKEINLMP--MRIKTLGGIKIIQVSCGHYHSLALSED 144

Query: 425 GKVFCWGWNKYGQLGLG-DVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLAV 474
           G+VF WG N  GQLGLG     +  P +VT +EG     VA G  H+  L++
Sbjct: 145 GQVFSWGKNSQGQLGLGMQSSSQASPQKVTSLEGIPLAQVAAGGSHSFALSL 196



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 72/137 (52%), Gaps = 4/137 (2%)

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D   P  ++   G+++   A+G  H++ + S+  VY+ G N  GQLG   +Q    P  +
Sbjct: 8   DSRQPRRLNGRDGLELLQAASGERHSLLLFSNHRVYSCGDNSLGQLGQKREQNTEQPEPI 67

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNI-PSQV-TIEG 456
            A  L  +    VSCG  H+  +   G+VF WG    GQLG+G+  + N+ P ++ T+ G
Sbjct: 68  QA--LGTLDIDLVSCGKEHSIAVCHKGRVFAWGAGSEGQLGIGEFKEINLMPMRIKTLGG 125

Query: 457 CVPRNVACGWWHTLLLA 473
                V+CG +H+L L+
Sbjct: 126 IKIIQVSCGHYHSLALS 142



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 87/216 (40%), Gaps = 40/216 (18%)

Query: 210 AFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLG--SRIRMVSSPHP 267
           A P  VT   G+ +A VAAGG H+ ALS  G  +GWG    GQL L   +    +S PH 
Sbjct: 168 ASPQKVTSLEGIPLAQVAAGGSHSFALSLTGTSYGWGSNSVGQLALSGENSTVQISKPHS 227

Query: 268 IPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWG 327
           I  ++ + G                         V  I+CG  H+AV+T  G + TFG  
Sbjct: 228 IDALK-NLG-------------------------VIYISCGYEHTAVLTKDGQVFTFGDN 261

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFGGNQFGQLGT 386
             GQ           P  V  + G Q+  +  G +HTI  + + G V + G    G   T
Sbjct: 262 SSGQLQNNPRGKRRGPQLVEGIKG-QVSKIECGSYHTIAYVYTTGQVVSLGH---GPRPT 317

Query: 387 GGDQAETLPR-------LLDAPSLENVHSKSVSCGA 415
                +  P        LL A  L +V  K +  GA
Sbjct: 318 SNPTHQKAPAESSDIICLLSAADLVDVKVKDIFAGA 353


>gi|297603670|ref|NP_001054420.2| Os05g0106700 [Oryza sativa Japonica Group]
 gi|255675937|dbj|BAF16334.2| Os05g0106700 [Oryza sativa Japonica Group]
          Length = 685

 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 121/258 (46%), Gaps = 41/258 (15%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G+ +A V+ G  HT  ++ +GQ++ +G G  G LG G+ +  +S P  +  +        
Sbjct: 183 GLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGN-LTSISCPKEVESLS------- 234

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITD-----------AGALLTFGWGL 328
                              G     +ACG  H+A I +           AG L T+G G 
Sbjct: 235 -------------------GLKTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGD 275

Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGG 388
             + G G  +  L P CV+SL+      VA G   T+C+++ G V + G + +GQLG   
Sbjct: 276 KHRLGHGDKESRLKPTCVASLIDYDFYRVACGHSLTVCLTTSGKVLSMGNSVYGQLGNPN 335

Query: 389 DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNI 448
                LP L++   +   H   V+CG+ H AV+    +VF WG    G+LG GD+ DR +
Sbjct: 336 SDGR-LPCLVE-DRIAGEHVLQVACGSYHVAVLTGRSEVFTWGKGANGRLGHGDIEDRKV 393

Query: 449 PSQV-TIEGCVPRNVACG 465
           P+QV  ++    R++ACG
Sbjct: 394 PTQVEALKDRAVRHIACG 411



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 58/171 (33%), Positives = 95/171 (55%), Gaps = 4/171 (2%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V  + CG RH+A++T  G + T+G    G+ G G+ +D + P  V SL    ++ VA G 
Sbjct: 79  VYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNVDFVACGE 138

Query: 362 WHTICISSDGDVYAFGG--NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
           +HT  +++ G++Y +G   +  G LG G D    +P+ +   +L+ +    VSCG  HTA
Sbjct: 139 FHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISG-ALDGLPVAYVSCGTWHTA 197

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
           +I   G++F +G   +G LG G++   + P +V ++ G     VACG WHT
Sbjct: 198 LITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESLSGLKTIAVACGVWHT 248



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 72/138 (52%), Gaps = 6/138 (4%)

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D L P  + S L + +  V  G+ H   ++ +GDV+ +G +  G+LG G  +    PRL+
Sbjct: 64  DFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSVHPRLV 123

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCW--GWNKYGQLGLGDVIDRNIPSQVT--I 454
           ++ +  NV    V+CG  HT  +   G+++ W  G +  G LG G      IP +++  +
Sbjct: 124 ESLAACNV--DFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGAL 181

Query: 455 EGCVPRNVACGWWHTLLL 472
           +G     V+CG WHT L+
Sbjct: 182 DGLPVAYVSCGTWHTALI 199



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 89/204 (43%), Gaps = 40/204 (19%)

Query: 204 GDENLSAFPC--LVTLNPGVRIATVAAGGRHTLALSDI-----------GQVWGWGYGGE 250
           G  NL++  C   V    G++   VA G  HT A+ ++           G+++ WG G +
Sbjct: 217 GHGNLTSISCPKEVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDK 276

Query: 251 GQLGLG---SRIR-------------MVSSPHPIPCIESSYGKDRSAALS----RGSVNS 290
            +LG G   SR++              V+  H +    ++ GK  S   S     G+ NS
Sbjct: 277 HRLGHGDKESRLKPTCVASLIDYDFYRVACGHSLTVCLTTSGKVLSMGNSVYGQLGNPNS 336

Query: 291 EG--PGF---RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNC 345
           +G  P     R+ G +V  +ACG  H AV+T    + T+G G  G+ G G  +D   P  
Sbjct: 337 DGRLPCLVEDRIAGEHVLQVACGSYHVAVLTGRSEVFTWGKGANGRLGHGDIEDRKVPTQ 396

Query: 346 VSSLLGIQIEGVAAGLWHT--ICI 367
           V +L    +  +A G   T  IC+
Sbjct: 397 VEALKDRAVRHIACGANFTAAICL 420


>gi|307106099|gb|EFN54346.1| hypothetical protein CHLNCDRAFT_24715 [Chlorella variabilis]
          Length = 393

 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 116/256 (45%), Gaps = 37/256 (14%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
           R+  ++AG  HTL + + G VW +G  G+GQLGLG  + +V  P  +  ++         
Sbjct: 89  RVVALSAGYYHTLCVGESGSVWSFGCNGKGQLGLGKDVVLVREPRLVKSLQD-------- 140

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGS----- 336
                             N V  +A G  HS  +T  G + ++G    G+ G GS     
Sbjct: 141 ------------------NKVVAVAAGMEHSLALTAGGEVYSWGNAANGRLGHGSATPRR 182

Query: 337 ---TDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAET 393
              +  E  P  V +   +++E V+AG  H+  +S+ GD + +G  +F QLG G D+   
Sbjct: 183 LFGSSIEFLPRLVRAFEALRVEQVSAGQMHSAAVSTAGDAFLWGYGKFHQLGFGSDEDLA 242

Query: 394 LPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT 453
            P +L  P L+   + +V+CG+ H+  +   G V  WG N+ G LG G    +       
Sbjct: 243 GPTVL--PPLKG-STAAVACGSLHSLALQYGGHVLAWGTNQNGVLGQGHEKQQQPKRPSK 299

Query: 454 IEGCVPRNVACGWWHT 469
           + G     +A GW H+
Sbjct: 300 VPGVSAEQIAAGWKHS 315



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 119/426 (27%), Positives = 174/426 (40%), Gaps = 67/426 (15%)

Query: 64  RKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYT 121
           R L T+G+ D   LG S   + +  E+P          +   A G AH  AV + G VYT
Sbjct: 3   RVLATFGNGDCGRLGHSLEYASE--ELPRVVRALLGVPLKAVACGGAHTAAVDDSGTVYT 60

Query: 122 WGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGS 181
           WG  +    G    D   G   +  + ER  + L+        V  S    S G +G+G 
Sbjct: 61  WGLNDKGQLGHDSEDSEVGLPGEVAMPERVVA-LSAGYYHTLCVGESGSVWSFGCNGKG- 118

Query: 182 GEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQ 241
                   ++ L K         D  L   P LV      ++  VAAG  H+LAL+  G+
Sbjct: 119 --------QLGLGK---------DVVLVREPRLVKSLQDNKVVAVAAGMEHSLALTAGGE 161

Query: 242 VWGWGYGGEGQLGLGS---RIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVP 298
           V+ WG    G+LG GS   R    SS   +P +  ++   R                   
Sbjct: 162 VYSWGNAANGRLGHGSATPRRLFGSSIEFLPRLVRAFEALR------------------- 202

Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
              V+ ++ G  HSA ++ AG    +G+G + Q G GS +D   P  +  L G     VA
Sbjct: 203 ---VEQVSAGQMHSAAVSTAGDAFLWGYGKFHQLGFGSDEDLAGPTVLPPLKG-STAAVA 258

Query: 359 AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
            G  H++ +   G V A+G NQ G LG G ++ +   R    P    V ++ ++ G +H+
Sbjct: 259 CGSLHSLALQYGGHVLAWGTNQNGVLGQGHEKQQQPKRPSKVP---GVSAEQIAAGWKHS 315

Query: 419 AVIADDGKVFCWGWNKY--------------GQLGLGDVIDRNIPSQVTIEGCVPRN-VA 463
           A +   GK++ WGW                 GQLG G+  D   P  V        + VA
Sbjct: 316 AAVTGSGKLYTWGWGGSQGTALSFEGRTGTGGQLGHGNDFDYWSPHHVDWLSLTETDLVA 375

Query: 464 CGWWHT 469
           CG  HT
Sbjct: 376 CGMNHT 381



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 87/272 (31%), Positives = 123/272 (45%), Gaps = 41/272 (15%)

Query: 211 FPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPC 270
            P +V    GV +  VA GG HT A+ D G V+ WG   +GQLG  S    V  P  +  
Sbjct: 27  LPRVVRALLGVPLKAVACGGAHTAAVDDSGTVYTWGLNDKGQLGHDSEDSEVGLPGEVAM 86

Query: 271 IESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
            E      R  ALS G                        H+  + ++G++ +FG    G
Sbjct: 87  PE------RVVALSAGYY----------------------HTLCVGESGSVWSFGCNGKG 118

Query: 331 QCGQGSTDDEL--SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG- 387
           Q G G  D  L   P  V SL   ++  VAAG+ H++ +++ G+VY++G    G+LG G 
Sbjct: 119 QLGLGK-DVVLVREPRLVKSLQDNKVVAVAAGMEHSLALTAGGEVYSWGNAANGRLGHGS 177

Query: 388 -------GDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL 440
                  G   E LPRL+ A   E +  + VS G  H+A ++  G  F WG+ K+ QLG 
Sbjct: 178 ATPRRLFGSSIEFLPRLVRA--FEALRVEQVSAGQMHSAAVSTAGDAFLWGYGKFHQLGF 235

Query: 441 GDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           G   D   P+ +         VACG  H+L L
Sbjct: 236 GSDEDLAGPTVLPPLKGSTAAVACGSLHSLAL 267



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 111/412 (26%), Positives = 168/412 (40%), Gaps = 74/412 (17%)

Query: 33  PLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPE 90
           P VVR  L  G   + V  GG   A A+ DS  + TWG  D   LG     S    E+  
Sbjct: 28  PRVVRALL--GVPLKAVACGGAHTA-AVDDSGTVYTWGLNDKGQLGHDSEDS----EVGL 80

Query: 91  PFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFER 150
           P  +     +V  +AG+ H + V E G V+++G   C   G++        GL KDV   
Sbjct: 81  PGEVAMPERVVALSAGYYHTLCVGESGSVWSFG---CNGKGQL--------GLGKDVVLV 129

Query: 151 QSSFLTEQVSPRSQVSRSSG-----GTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGD 205
           +   L + +     V+ ++G       ++G +    G   + R    L   +A       
Sbjct: 130 REPRLVKSLQDNKVVAVAAGMEHSLALTAGGEVYSWGNAANGR----LGHGSATPRRLFG 185

Query: 206 ENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSP 265
            ++   P LV     +R+  V+AG  H+ A+S  G  + WGYG   QLG GS    ++ P
Sbjct: 186 SSIEFLPRLVRAFEALRVEQVSAGQMHSAAVSTAGDAFLWGYGKFHQLGFGSD-EDLAGP 244

Query: 266 HPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFG 325
             +P ++ S                              +ACG  HS  +   G +L +G
Sbjct: 245 TVLPPLKGS---------------------------TAAVACGSLHSLALQYGGHVLAWG 277

Query: 326 WGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG--GNQF-- 381
               G  GQG  + +  P   S + G+  E +AAG  H+  ++  G +Y +G  G+Q   
Sbjct: 278 TNQNGVLGQGH-EKQQQPKRPSKVPGVSAEQIAAGWKHSAAVTGSGKLYTWGWGGSQGTA 336

Query: 382 ----------GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
                     GQLG G D     P  +D  SL    +  V+CG  HTA I +
Sbjct: 337 LSFEGRTGTGGQLGHGNDFDYWSPHHVDWLSL--TETDLVACGMNHTAAIVE 386



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/98 (39%), Positives = 54/98 (55%), Gaps = 7/98 (7%)

Query: 376 FGGNQFGQLGTGGDQA-ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNK 434
           FG    G+LG   + A E LPR++ A  L  V  K+V+CG  HTA + D G V+ WG N 
Sbjct: 8   FGNGDCGRLGHSLEYASEELPRVVRA--LLGVPLKAVACGGAHTAAVDDSGTVYTWGLND 65

Query: 435 YGQLGLGDVIDRNI--PSQVTIEGCVPRNVACGWWHTL 470
            GQLG  D  D  +  P +V +   V   ++ G++HTL
Sbjct: 66  KGQLGH-DSEDSEVGLPGEVAMPERVVA-LSAGYYHTL 101


>gi|410208770|gb|JAA01604.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
 gi|410264080|gb|JAA20006.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
 gi|410293806|gb|JAA25503.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
 gi|410338543|gb|JAA38218.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
          Length = 555

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/203 (34%), Positives = 110/203 (54%), Gaps = 7/203 (3%)

Query: 276 GKDRSAALSRGSVNSEGPGFRVPGNYVKGIAC----GGRHSAVITDAGALLTFGWGLYGQ 331
           G +    L  G V S     R+     K IAC     G H  + T  G + T+G   Y Q
Sbjct: 71  GTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQ 130

Query: 332 CGQGSTDDELSPNCVSS-LLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            G G+T+  L P  +S+ L   Q+  VA G +H++ ++SDG+V+A+G N  GQ+G+G   
Sbjct: 131 LGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTV 190

Query: 391 AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
            + +PR +    L+N    +++CG      + D G+V+ WG+N  GQLGLG+  ++  P 
Sbjct: 191 NQPIPRRVTG-CLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPC 249

Query: 451 QVT-IEGCVPRNVACGWWHTLLL 472
           +V  ++G   + VACG+ HTL+L
Sbjct: 250 RVAALQGIRVQRVACGYAHTLVL 272



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 122/244 (50%), Gaps = 31/244 (12%)

Query: 214 LVTLNPGVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIE 272
           L +LN G +IA ++ G G H +  +  G+V+ WG+    QLG G+     ++   +PC  
Sbjct: 92  LDSLN-GKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT-----TNHGLVPCHI 145

Query: 273 SSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQC 332
           S+                      +    V  +ACG  HS V+T  G +  +G+   GQ 
Sbjct: 146 ST---------------------NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQV 184

Query: 333 GQGSTDDELSPNCVSSLLGIQIE-GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
           G GST ++  P  V+  L  ++   +A G    + +   G+VY +G N  GQLG G    
Sbjct: 185 GSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGN 244

Query: 392 ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
           +  P  + A  L+ +  + V+CG  HT V+ D+G+V+ WG N YGQLG G+  +++ P+ 
Sbjct: 245 QPTPCRVAA--LQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 302

Query: 452 VTIE 455
           VT+E
Sbjct: 303 VTVE 306



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 109/231 (47%), Gaps = 30/231 (12%)

Query: 203 SGDENLSAFPCLVTLN-PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +G  N    PC ++ N    ++  VA G  H+L L+  G+V+ WGY   GQ+G GS +  
Sbjct: 133 NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVN- 191

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
                PIP         R     +  V             V  IACG      + D G +
Sbjct: 192 ----QPIP--------RRVTGCLQNKV-------------VVTIACGQMCCMAVVDTGEV 226

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             +G+   GQ G G++ ++ +P  V++L GI+++ VA G  HT+ ++ +G VYA+G N +
Sbjct: 227 YVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSY 286

Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           GQLGTG    ++ P  +       +  +  +C + HT A     G V+ WG
Sbjct: 287 GQLGTGNKSNQSYPTPVTVEKDRII--EIAACHSTHTSAAKTQGGHVYMWG 335



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 56/115 (48%), Gaps = 23/115 (20%)

Query: 370 DGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR----HTAVIADDG 425
           + +++  G N  G LG G  Q+   PR LD+     ++ K ++C +     H  +   +G
Sbjct: 64  NDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS-----LNGKKIACLSYGSGPHIVLATTEG 118

Query: 426 KVFCWGWNKYGQLGLGDV--------IDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           +VF WG N Y QLG G          I  N+ ++  IE      VACG +H+L+L
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIE------VACGSYHSLVL 167



 Score = 39.3 bits (90), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 55/133 (41%), Gaps = 17/133 (12%)

Query: 14  VFMWGYL-PGALPQRSPILSPLVVRLP--LTVGSAWRDVCGGGCGFAMAISDSRKLITWG 70
           VF WGY   G +   S +  P+  R+   L         CG  C   MA+ D+ ++  WG
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMC--CMAVVDTGEVYVWG 230

Query: 71  STDDLGQSYVTSGKHGEIPEPFPLPTEASI--VKAAAGWAHCVAVTEGGEVYTWGWKECV 128
                G   +  G  G  P P  +     I   + A G+AH + +T+ G+VY WG     
Sbjct: 231 YN---GNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG----- 282

Query: 129 PSGRVFGDLSTGT 141
                +G L TG 
Sbjct: 283 --ANSYGQLGTGN 293


>gi|309792077|ref|ZP_07686551.1| regulator of chromosome condensation RCC1 [Oscillochloris
           trichoides DG-6]
 gi|308225884|gb|EFO79638.1| regulator of chromosome condensation RCC1 [Oscillochloris
           trichoides DG6]
          Length = 778

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 76/232 (32%), Positives = 110/232 (47%), Gaps = 32/232 (13%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +A +AAGG HT ALS  G V  WG+    QLG G+R       H  P         +   
Sbjct: 568 VAAIAAGGSHTCALSTEGGVTCWGWNTYDQLGDGTRTN-----HNTPV--------QVEG 614

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
           LS G               V  IA G  H+  +  +G +  +GW  YGQ G G+T   ++
Sbjct: 615 LSSG---------------VAAIAAGYAHTCALITSGEVTCWGWNWYGQLGDGTTTQRMT 659

Query: 343 PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPS 402
           P  V+ L   ++  + AG  HT  +S+ G V  +G N++ QLG G     ++P  +D  S
Sbjct: 660 PVVVNGLSS-EVAAIVAGYAHTCALSTGGGVTCWGWNKYYQLGNGTISQRSIPMDVDGLS 718

Query: 403 LENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI 454
                  +++ G  HT  ++  G V CWGW+ YGQLG+G +  R  P  VT+
Sbjct: 719 ---SGVAALAAGDAHTCGLSTGGGVTCWGWDVYGQLGVGTIAYRTTPVDVTV 767



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 81/261 (31%), Positives = 116/261 (44%), Gaps = 43/261 (16%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES-----SYGK 277
           +  + AG  HT ALS  G V  WG  G GQLG G+  +  S+P  +  + S     + G 
Sbjct: 466 VVAITAGDSHTCALSTEGGVTCWGGNGSGQLGNGTTTQR-STPVQVEGLSSGVMAITAGD 524

Query: 278 DRSAALSRGS---------VNSEGPGFRVPGNY----------VKGIACGGRHSAVITDA 318
             + AL+ G              G G     N           V  IA GG H+  ++  
Sbjct: 525 SHTCALTTGGGVTCWGGNWYGQLGDGTTTQRNMPVNVVGLSSGVAAIAAGGSHTCALSTE 584

Query: 319 GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG-------VAAGLWHTICISSDG 371
           G +  +GW  Y Q G G+  +  +P        +Q+EG       +AAG  HT  + + G
Sbjct: 585 GGVTCWGWNTYDQLGDGTRTNHNTP--------VQVEGLSSGVAAIAAGYAHTCALITSG 636

Query: 372 DVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWG 431
           +V  +G N +GQLG G       P +++  S E     ++  G  HT  ++  G V CWG
Sbjct: 637 EVTCWGWNWYGQLGDGTTTQRMTPVVVNGLSSE---VAAIVAGYAHTCALSTGGGVTCWG 693

Query: 432 WNKYGQLGLGDVIDRNIPSQV 452
           WNKY QLG G +  R+IP  V
Sbjct: 694 WNKYYQLGNGTISQRSIPMDV 714



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 119/444 (26%), Positives = 181/444 (40%), Gaps = 70/444 (15%)

Query: 37  RLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPT 96
           R P+  G A          +  A++ +  +I WG+ ++ GQ     G    I    P+  
Sbjct: 58  RTPIAAGDA----------YTCALTTNSAVICWGN-NEFGQL----GDGTTIQRNTPVAV 102

Query: 97  E---ASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSS 153
               + +V  AAG+AH  A+T  G V  WG  E   SG++   ++        V    S 
Sbjct: 103 NGLSSGVVAIAAGYAHTCALTTSGGVSCWGNNE---SGQLGNGITIQRRTPVQVAGLSSG 159

Query: 154 FLTEQVSPRSQVSRSSGG--TSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAF 211
                       + ++ G  T  G++G G   +G+  +R S   Q A  SS         
Sbjct: 160 VAAIAAGEYHTCALTTDGAVTCWGSNGYGQLGDGTTTQR-STPVQVAGLSSG-------- 210

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQ---------------LGLG 256
                      +  + AGG HT AL+  G V  WG  G GQ               LGL 
Sbjct: 211 -----------VTAITAGGSHTCALTTGGAVTCWGRNGNGQLGDGTTTQRSTPVNVLGLS 259

Query: 257 SRIRMVSSPHPIPCIESS------YGKDRSAALSRGSVNSEGPGFRVPG--NYVKGIACG 308
           S +  +++     C  ++      +G + S  L  G+ +       V G  + V  IA G
Sbjct: 260 SEVAAITAGDVYTCALTTGGGVTCWGANWSGQLGDGTTDERSTPVDVVGLSSGVTAIAAG 319

Query: 309 GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICIS 368
             H+  IT  G +  +G   Y Q G G+T  + +P  V+ L   +   +AAG  HT  ++
Sbjct: 320 NDHTCAITTGGGVSCWGVNQYSQLGDGTTTQQSTPVVVNGLSS-RAAAIAAGDGHTCAMT 378

Query: 369 SDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVF 428
           + G V  +G N  GQLG G       P  ++  S        ++ G  HT  ++ +G V 
Sbjct: 379 TGGGVSCWGRNWSGQLGDGTTTQRRTPMQVEGLS---SGVADITAGDSHTCALSTEGGVT 435

Query: 429 CWGWNKYGQLGLGDVIDRNIPSQV 452
           CWG N+ GQLG G  I R+ P QV
Sbjct: 436 CWGNNESGQLGDGTTIQRSTPVQV 459



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 110/407 (27%), Positives = 158/407 (38%), Gaps = 68/407 (16%)

Query: 100 IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQV 159
           +   AAG  H  A+T GG V  WG  +       +  L  GT       ++ +  +   +
Sbjct: 313 VTAIAAGNDHTCAITTGGGVSCWGVNQ-------YSQLGDGT-----TTQQSTPVVVNGL 360

Query: 160 SPRSQ-VSRSSGGTSSGTDGRG--------SGEEGSKRRRISLAKQTAESSSSGDENLSA 210
           S R+  ++   G T + T G G        SG+ G             E  SSG      
Sbjct: 361 SSRAAAIAAGDGHTCAMTTGGGVSCWGRNWSGQLGDGTTTQRRTPMQVEGLSSG------ 414

Query: 211 FPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPC 270
                       +A + AG  HT ALS  G V  WG    GQLG G+ I+  S+P  +  
Sbjct: 415 ------------VADITAGDSHTCALSTEGGVTCWGNNESGQLGDGTTIQR-STPVQVEG 461

Query: 271 IES----------------------SYGKDRSAALSRGSVNSEGPGFRVPG--NYVKGIA 306
           + S                       +G + S  L  G+        +V G  + V  I 
Sbjct: 462 LSSGVVAITAGDSHTCALSTEGGVTCWGGNGSGQLGNGTTTQRSTPVQVEGLSSGVMAIT 521

Query: 307 CGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC 366
            G  H+  +T  G +  +G   YGQ G G+T     P  V  L    +  +AAG  HT  
Sbjct: 522 AGDSHTCALTTGGGVTCWGGNWYGQLGDGTTTQRNMPVNVVGLSS-GVAAIAAGGSHTCA 580

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           +S++G V  +G N + QLG G       P  ++  S       +++ G  HT  +   G+
Sbjct: 581 LSTEGGVTCWGWNTYDQLGDGTRTNHNTPVQVEGLS---SGVAAIAAGYAHTCALITSGE 637

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           V CWGWN YGQLG G    R  P  V         +  G+ HT  L+
Sbjct: 638 VTCWGWNWYGQLGDGTTTQRMTPVVVNGLSSEVAAIVAGYAHTCALS 684



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 89/193 (46%), Gaps = 12/193 (6%)

Query: 265 PHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKG-----IACGGRHSAVITDAG 319
           P  +P + S +      AL+  ++N E P   +  N         IA G  ++  +T   
Sbjct: 19  PQSVPSVTSRF---DFVALNPTNLNYELPATVLEANIASAQHRTPIAAGDAYTCALTTNS 75

Query: 320 ALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN 379
           A++ +G   +GQ G G+T    +P  V+ L    +  +AAG  HT  +++ G V  +G N
Sbjct: 76  AVICWGNNEFGQLGDGTTIQRNTPVAVNGLSS-GVVAIAAGYAHTCALTTSGGVSCWGNN 134

Query: 380 QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG 439
           + GQLG G       P  +   S       +++ G  HT  +  DG V CWG N YGQLG
Sbjct: 135 ESGQLGNGITIQRRTPVQVAGLS---SGVAAIAAGEYHTCALTTDGAVTCWGSNGYGQLG 191

Query: 440 LGDVIDRNIPSQV 452
            G    R+ P QV
Sbjct: 192 DGTTTQRSTPVQV 204



 Score = 46.2 bits (108), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 68/275 (24%), Positives = 108/275 (39%), Gaps = 46/275 (16%)

Query: 100 IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQV 159
           ++   AG +H  A+T GG V  WG       G  +G L  GT   +++            
Sbjct: 517 VMAITAGDSHTCALTTGGGVTCWG-------GNWYGQLGDGTTTQRNM------------ 557

Query: 160 SPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVT-LN 218
            P + V  SSG  +    G  +    ++         T +    G       P  V  L+
Sbjct: 558 -PVNVVGLSSGVAAIAAGGSHTCALSTEGGVTCWGWNTYDQLGDGTRTNHNTPVQVEGLS 616

Query: 219 PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG---------------LGSRIRMVS 263
            GV  A +AAG  HT AL   G+V  WG+   GQLG               L S +  + 
Sbjct: 617 SGV--AAIAAGYAHTCALITSGEVTCWGWNWYGQLGDGTTTQRMTPVVVNGLSSEVAAIV 674

Query: 264 SPHPIPCIESS------YGKDRSAALSRGSVNSEGPGFRVPG--NYVKGIACGGRHSAVI 315
           + +   C  S+      +G ++   L  G+++       V G  + V  +A G  H+  +
Sbjct: 675 AGYAHTCALSTGGGVTCWGWNKYYQLGNGTISQRSIPMDVDGLSSGVAALAAGDAHTCGL 734

Query: 316 TDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLL 350
           +  G +  +GW +YGQ G G+     +P  V+ L 
Sbjct: 735 STGGGVTCWGWDVYGQLGVGTIAYRTTPVDVTVLF 769


>gi|395521023|ref|XP_003764621.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Sarcophilus
           harrisii]
          Length = 552

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 61/176 (34%), Positives = 102/176 (57%), Gaps = 7/176 (3%)

Query: 303 KGIAC----GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGI-QIEGV 357
           K IAC     G H  + TD G + T+G   Y Q G G+T+  L P  +S+ LG  ++  V
Sbjct: 99  KKIACLSYGSGPHVVIATDEGEVYTWGHNAYNQLGNGTTNHGLVPTHISTNLGNRKVIEV 158

Query: 358 AAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARH 417
           A G  H++ ++SDG+V+A+G N  GQ+G+G    + +PR +    L+N  + +++CG   
Sbjct: 159 ACGSHHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRKVTG-CLQNKIATTIACGQMC 217

Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
           +  + + G+V+ WG+N  GQLGLG   ++  P ++  ++G     + CG+ HTL+L
Sbjct: 218 SMAVVESGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVHKIVCGYAHTLVL 273



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 121/253 (47%), Gaps = 31/253 (12%)

Query: 220 GVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
           G +IA ++ G G H +  +D G+V+ WG+    QLG G+    +   H    I ++ G  
Sbjct: 98  GKKIACLSYGSGPHVVIATDEGEVYTWGHNAYNQLGNGTTNHGLVPTH----ISTNLGNR 153

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
           +                      V  +ACG  HS V+T  G +  +G+   GQ G GST 
Sbjct: 154 K----------------------VIEVACGSHHSLVLTSDGEVFAWGYNNSGQVGSGSTA 191

Query: 339 DELSPNCVSSLLGIQI-EGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
           ++  P  V+  L  +I   +A G   ++ +   G+VY +G N  GQLG G    +  P  
Sbjct: 192 NQPIPRKVTGCLQNKIATTIACGQMCSMAVVESGEVYVWGYNGNGQLGLGSSGNQPTPCR 251

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE-G 456
           + A  L+ +    + CG  HT V+ D+G ++ WG N YGQLG G+  +++ P+ V++E  
Sbjct: 252 IAA--LQGIRVHKIVCGYAHTLVLTDEGHLYAWGANSYGQLGTGNKSNQSYPTPVSVEKD 309

Query: 457 CVPRNVACGWWHT 469
            V    AC   HT
Sbjct: 310 RVIEIAACHSAHT 322



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 111/231 (48%), Gaps = 30/231 (12%)

Query: 203 SGDENLSAFPCLVTLNPGVR-IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +G  N    P  ++ N G R +  VA G  H+L L+  G+V+ WGY   GQ+G GS    
Sbjct: 134 NGTTNHGLVPTHISTNLGNRKVIEVACGSHHSLVLTSDGEVFAWGYNNSGQVGSGS---- 189

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
            ++  PIP   +   +++ A                       IACG   S  + ++G +
Sbjct: 190 -TANQPIPRKVTGCLQNKIATT---------------------IACGQMCSMAVVESGEV 227

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             +G+   GQ G GS+ ++ +P  +++L GI++  +  G  HT+ ++ +G +YA+G N +
Sbjct: 228 YVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVHKIVCGYAHTLVLTDEGHLYAWGANSY 287

Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           GQLGTG    ++ P  +       +  +  +C + HT A     G ++ WG
Sbjct: 288 GQLGTGNKSNQSYPTPVSVEKDRVI--EIAACHSAHTSAAKTQSGHIYMWG 336



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 93/230 (40%), Gaps = 46/230 (20%)

Query: 61  SDSRKLITWGST--DDLGQSYVTSGKHGEIPEPFPLPT-EASIVKAAAGWAHCVAVTEGG 117
           +D  ++ TWG    + LG     +  HG +P           +++ A G  H + +T  G
Sbjct: 116 TDEGEVYTWGHNAYNQLGNG---TTNHGLVPTHISTNLGNRKVIEVACGSHHSLVLTSDG 172

Query: 118 EVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPR-------SQVSRSSG 170
           EV+ WG+          G + +G+  ++ +  + +  L  +++         S     SG
Sbjct: 173 EVFAWGYNNS-------GQVGSGSTANQPIPRKVTGCLQNKIATTIACGQMCSMAVVESG 225

Query: 171 GTSS-GTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAG 229
                G +G G    GS                SG++     PC +    G+R+  +  G
Sbjct: 226 EVYVWGYNGNGQLGLGS----------------SGNQ---PTPCRIAALQGIRVHKIVCG 266

Query: 230 GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
             HTL L+D G ++ WG    GQLG G++    S P P+     S  KDR
Sbjct: 267 YAHTLVLTDEGHLYAWGANSYGQLGTGNKSNQ-SYPTPV-----SVEKDR 310



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 11/111 (9%)

Query: 368 SSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR----HTAVIAD 423
           + + +V+  G N  G LGTG       PR +D     ++  K ++C +     H  +  D
Sbjct: 63  TENDEVFVLGTNCSGCLGTGDILHSIEPRRVD-----HLCGKKIACLSYGSGPHVVIATD 117

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPR--NVACGWWHTLLL 472
           +G+V+ WG N Y QLG G      +P+ ++      +   VACG  H+L+L
Sbjct: 118 EGEVYTWGHNAYNQLGNGTTNHGLVPTHISTNLGNRKVIEVACGSHHSLVL 168


>gi|301767480|ref|XP_002919156.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like
           [Ailuropoda melanoleuca]
          Length = 551

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 103/176 (58%), Gaps = 7/176 (3%)

Query: 303 KGIAC----GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS-LLGIQIEGV 357
           K IAC     G H  + T  G + T+G   Y Q G G+T+  L P  +S+ L   Q+  V
Sbjct: 98  KKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEV 157

Query: 358 AAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARH 417
           A G +H++ ++SDG+V+A+G N  GQ+G+G    + +PR +    L+N  + +++CG   
Sbjct: 158 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTG-CLQNKVAVNIACGQMC 216

Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
           +  + + G+V+ WG+N  GQLGLG   ++  P ++  ++G   + VACG+ HTL+L
Sbjct: 217 SMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVL 272



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 119/238 (50%), Gaps = 30/238 (12%)

Query: 220 GVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
           G +IA ++ G G H +  +  G+V+ WG+    QLG G+     ++   +PC  S+    
Sbjct: 97  GKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT-----TNHGLVPCHIST---- 147

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
                             +    V  +ACG  HS V+T  G +  +G+   GQ G GST 
Sbjct: 148 -----------------NLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTA 190

Query: 339 DELSPNCVSSLLGIQIE-GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
           ++  P  V+  L  ++   +A G   ++ + + G+VY +G N  GQLG G    +  P  
Sbjct: 191 NQPIPRRVTGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCR 250

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
           + A  L+ +  + V+CG  HT V+ D+G+V+ WG N YGQLG G+  +++ P+ V +E
Sbjct: 251 IAA--LQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPVIVE 306



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 69/233 (29%), Positives = 115/233 (49%), Gaps = 34/233 (14%)

Query: 203 SGDENLSAFPCLVTLN-PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +G  N    PC ++ N    ++  VA G  H+L L+  G+V+ WGY   GQ+G GS    
Sbjct: 133 NGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---- 188

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
            ++  PIP   +   +++ A                       IACG   S  + + G +
Sbjct: 189 -TANQPIPRRVTGCLQNKVAV---------------------NIACGQMCSMAVVNTGEV 226

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             +G+   GQ G GS+ ++ +P  +++L GI+++ VA G  HT+ ++ +G VYA+G N +
Sbjct: 227 YVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSY 286

Query: 382 GQLGTGGDQAETLPRLLDAPSL--ENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           GQLGTG    ++ P    AP +  ++   +  +C + HT A     G V+ WG
Sbjct: 287 GQLGTGNKSNQSYP----APVIVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 335



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 92/224 (41%), Gaps = 42/224 (18%)

Query: 65  KLITWG--STDDLGQSYVTSGKHGEIPEPFPLP-TEASIVKAAAGWAHCVAVTEGGEVYT 121
           ++ TWG  +   LG     +  HG +P       +   + + A G  H + +T  GEV+ 
Sbjct: 119 EVFTWGHNAYSQLGNG---TTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFA 175

Query: 122 WGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDG--- 178
           WG+          G + +G+  ++ +  R +  L  +V+      +        T     
Sbjct: 176 WGYNNS-------GQVGSGSTANQPIPRRVTGCLQNKVAVNIACGQMCSMAVVNTGEVYV 228

Query: 179 ---RGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLA 235
               G+G+ G                SSG++     PC +    G+R+  VA G  HTL 
Sbjct: 229 WGYNGNGQLG--------------LGSSGNQ---PTPCRIAALQGIRVQRVACGYAHTLV 271

Query: 236 LSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           L+D GQV+ WG    GQLG G++    +  +P P I     KDR
Sbjct: 272 LTDEGQVYAWGANSYGQLGTGNK---SNQSYPAPVIVE---KDR 309



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 3/105 (2%)

Query: 370 DGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFC 429
           + +++  G N  G LG G  Q+   PR LD+ S + +   S   G  H  +   +G+VF 
Sbjct: 64  NDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGP-HIVLATTEGEVFT 122

Query: 430 WGWNKYGQLGLGDVIDRNIPSQVT--IEGCVPRNVACGWWHTLLL 472
           WG N Y QLG G      +P  ++  +       VACG +H+L+L
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVL 167



 Score = 38.9 bits (89), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 56/133 (42%), Gaps = 17/133 (12%)

Query: 14  VFMWGYL-PGALPQRSPILSPLVVRLP--LTVGSAWRDVCGGGCGFAMAISDSRKLITWG 70
           VF WGY   G +   S    P+  R+   L    A    CG  C  +MA+ ++ ++  WG
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVAVNIACGQMC--SMAVVNTGEVYVWG 230

Query: 71  STDDLGQSYVTSGKHGEIPEPFPLPTEASI--VKAAAGWAHCVAVTEGGEVYTWGWKECV 128
                G   +  G  G  P P  +     I   + A G+AH + +T+ G+VY WG     
Sbjct: 231 YN---GNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWG----- 282

Query: 129 PSGRVFGDLSTGT 141
                +G L TG 
Sbjct: 283 --ANSYGQLGTGN 293


>gi|444915391|ref|ZP_21235524.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444713468|gb|ELW54366.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 743

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/270 (32%), Positives = 130/270 (48%), Gaps = 28/270 (10%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI-RMV-------------SSPHPI 268
           +  VAAG  H+LAL   G VW WG    GQLG G+   R+V              S H +
Sbjct: 448 VVAVAAGFDHSLALRSDGSVWAWGSNAYGQLGEGTTTNRLVPVQVLSGVVAVAAGSNHSL 507

Query: 269 PCIES----SYGKDRSAALSRGSVNSEGPGFRVPG-NYVKGIACGGRHSAVITDAGALLT 323
                    ++G +    L  G+ ++     +V G + V  +A G  HS  +   G++  
Sbjct: 508 AVRSDGTVWTWGSNLYGQLGDGTTSNRLVPVQVQGLSGVAAVAAGSFHSLAVHSDGSVWA 567

Query: 324 FGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQ 383
           +G    G+ G G+T + L P  V  L G     VAAG +H++ + SDG V+ +G N FG+
Sbjct: 568 WGSNSSGELGDGTTSNRLVPGRVPGLSGG--VAVAAGGFHSLVVRSDGTVWTWGSNSFGE 625

Query: 384 LGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDV 443
           LG G   + ++P  +    L  V   +V  G  H+  +  DG V+ WG+N YGQLG G  
Sbjct: 626 LGDGTTTSRSVP--VQVQGLSGV--VAVDAGNSHSLAVRSDGTVWTWGYNSYGQLGDGTT 681

Query: 444 IDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
             R++P QV  + G V   +A G  H L++
Sbjct: 682 TRRSVPVQVPGLSGVVA--MATGALHPLVV 709



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 111/393 (28%), Positives = 166/393 (42%), Gaps = 71/393 (18%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
           G   ++A      +  WGS D  GQ  +  G       P  +   + +V  AAG+ H +A
Sbjct: 404 GFNHSLAARSDGSVWAWGSNDS-GQ--LGDGTTRNSTSPVQVQGLSGVVAVAAGFDHSLA 460

Query: 113 VTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDV-FERQSSFLTEQVSPRSQVSRSSGG 171
           +   G V+ WG          +G L  GT  ++ V  +  S  +         ++  S G
Sbjct: 461 LRSDGSVWAWG-------SNAYGQLGEGTTTNRLVPVQVLSGVVAVAAGSNHSLAVRSDG 513

Query: 172 T--SSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAG 229
           T  + G++  G   +G+   R+                    P  V    GV  A VAAG
Sbjct: 514 TVWTWGSNLYGQLGDGTTSNRL-------------------VPVQVQGLSGV--AAVAAG 552

Query: 230 GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVN 289
             H+LA+   G VW WG    G+LG G+     +S   +P                    
Sbjct: 553 SFHSLAVHSDGSVWAWGSNSSGELGDGT-----TSNRLVPG------------------- 588

Query: 290 SEGPGFRVPG-NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS 348
                 RVPG +    +A GG HS V+   G + T+G   +G+ G G+T     P  V  
Sbjct: 589 ------RVPGLSGGVAVAAGGFHSLVVRSDGTVWTWGSNSFGELGDGTTTSRSVPVQVQG 642

Query: 349 LLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHS 408
           L G+    V AG  H++ + SDG V+ +G N +GQLG G     ++P  +  P L  V  
Sbjct: 643 LSGV--VAVDAGNSHSLAVRSDGTVWTWGYNSYGQLGDGTTTRRSVP--VQVPGLSGV-- 696

Query: 409 KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
            +++ GA H  V+  DG V+ WG+N +GQLG G
Sbjct: 697 VAMATGALHPLVVRSDGTVWAWGYNSFGQLGNG 729



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 113/404 (27%), Positives = 171/404 (42%), Gaps = 71/404 (17%)

Query: 72  TDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSG 131
           ++DLGQ  +  G       P  +P  + +V  AAG +H +AV   G V+ WG      S 
Sbjct: 72  SNDLGQ--LGDGTTTNHSAPVQVPGLSGVVAVAAGSSHSLAVRHDGTVWAWG----SNSD 125

Query: 132 RVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGT--SSGTDGRGSGEEGSKRR 189
              GD +T   L     +  S  ++        ++  S GT  + G++  G   +G+   
Sbjct: 126 GQLGDGTTTMRLTPVRVQGLSGVVSVAAGSSYSLAVRSDGTVWAWGSNFSGQLGDGTTSN 185

Query: 190 RISLAKQTAESSSSGDENLSAFPCLVTLNPGVR-IATVAAGGRHTLALSDIGQVWGWGYG 248
           R+                    P  V   PG+  + +VAAG  H+LA+   G VW WG  
Sbjct: 186 RL-------------------VPVQV---PGLSGVVSVAAGSSHSLAVLSDGSVWAWGAN 223

Query: 249 GEGQLGLGSRI-RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIAC 307
             GQLG G++I R+V  P  +P +         AA                         
Sbjct: 224 SSGQLGDGTKINRLV--PVQVPGLSGVVAVAAGAA------------------------- 256

Query: 308 GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI 367
              HS  +   G + T+G   +GQ G G+  D L P  V  L G+    V  G +H++ +
Sbjct: 257 ---HSLAVRSDGTVWTWGANSFGQLGDGTKSDRLVPVRVQGLSGVVASDV--GSYHSLAL 311

Query: 368 SSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKV 427
            SDG V+A+G N  GQLG     + ++P  +   S       +V+ G+ H+  +  DG V
Sbjct: 312 RSDGSVWAWGHNSSGQLGDDSSTSRSVPVQVRGLS----GGMAVTAGSSHSLAVGSDGTV 367

Query: 428 FCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
           + WG N  G+ G G   +R  P QV  + G V   VA G+ H+L
Sbjct: 368 WAWGSNFSGERGEGTTNNRASPVQVQGLGGGVA--VAAGFNHSL 409



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 84/257 (32%), Positives = 121/257 (47%), Gaps = 41/257 (15%)

Query: 219 PGVR-IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
           PG+  +  VAAG  H+LA+   G VW WG   +GQLG G+    ++   P+         
Sbjct: 93  PGLSGVVAVAAGSSHSLAVRHDGTVWAWGSNSDGQLGDGTTTMRLT---PV--------- 140

Query: 278 DRSAALSRGSVNSEGPGFRVPG-NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGS 336
                             RV G + V  +A G  +S  +   G +  +G    GQ G G+
Sbjct: 141 ------------------RVQGLSGVVSVAAGSSYSLAVRSDGTVWAWGSNFSGQLGDGT 182

Query: 337 TDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPR 396
           T + L P  V  L G+    VAAG  H++ + SDG V+A+G N  GQLG G      +P 
Sbjct: 183 TSNRLVPVQVPGLSGV--VSVAAGSSHSLAVLSDGSVWAWGANSSGQLGDGTKINRLVP- 239

Query: 397 LLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IE 455
            +  P L      +V+ GA H+  +  DG V+ WG N +GQLG G   DR +P +V  + 
Sbjct: 240 -VQVPGLSG--VVAVAAGAAHSLAVRSDGTVWTWGANSFGQLGDGTKSDRLVPVRVQGLS 296

Query: 456 GCVPRNVACGWWHTLLL 472
           G V  +V    +H+L L
Sbjct: 297 GVVASDVGS--YHSLAL 311



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 78/230 (33%), Positives = 108/230 (46%), Gaps = 37/230 (16%)

Query: 224 ATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAAL 283
           A +AAG  ++LAL   G VW  G    GQLG G+     ++ H  P              
Sbjct: 49  ARLAAGSSYSLALRPDGTVWATGSNDLGQLGDGT-----TTNHSAPV------------- 90

Query: 284 SRGSVNSEGPGFRVPG-NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                       +VPG + V  +A G  HS  +   G +  +G    GQ G G+T   L+
Sbjct: 91  ------------QVPGLSGVVAVAAGSSHSLAVRHDGTVWAWGSNSDGQLGDGTTTMRLT 138

Query: 343 PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPS 402
           P  V  L G+    VAAG  +++ + SDG V+A+G N  GQLG G      +P  +  P 
Sbjct: 139 PVRVQGLSGV--VSVAAGSSYSLAVRSDGTVWAWGSNFSGQLGDGTTSNRLVP--VQVPG 194

Query: 403 LENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
           L  V   SV+ G+ H+  +  DG V+ WG N  GQLG G  I+R +P QV
Sbjct: 195 LSGV--VSVAAGSSHSLAVLSDGSVWAWGANSSGQLGDGTKINRLVPVQV 242



 Score = 45.4 bits (106), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 81/318 (25%), Positives = 111/318 (34%), Gaps = 75/318 (23%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
           G   ++A+     +  WGS      +Y   G+        P+   + +V  AAG  H +A
Sbjct: 454 GFDHSLALRSDGSVWAWGS-----NAYGQLGEGTTTNRLVPVQVLSGVVAVAAGSNHSLA 508

Query: 113 VTEGGEVYTWGWKECVPSGRVFGDLSTGT-----------GLDKDVFERQSSFLTEQVSP 161
           V   G V+TWG         ++G L  GT           GL         SF +  V  
Sbjct: 509 VRSDGTVWTWG-------SNLYGQLGDGTTSNRLVPVQVQGLSGVAAVAAGSFHSLAVHS 561

Query: 162 RSQV----SRSSGGTSSGTD------GRGSGEEG----------SKRRRISLAKQTAESS 201
              V    S SSG    GT       GR  G  G          S   R      T  S+
Sbjct: 562 DGSVWAWGSNSSGELGDGTTSNRLVPGRVPGLSGGVAVAAGGFHSLVVRSDGTVWTWGSN 621

Query: 202 SSG---DENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR 258
           S G   D   ++    V +     +  V AG  H+LA+   G VW WGY   GQLG G+ 
Sbjct: 622 SFGELGDGTTTSRSVPVQVQGLSGVVAVDAGNSHSLAVRSDGTVWTWGYNSYGQLGDGTT 681

Query: 259 IRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDA 318
            R  S P  +P +                              V  +A G  H  V+   
Sbjct: 682 TRR-SVPVQVPGLSG----------------------------VVAMATGALHPLVVRSD 712

Query: 319 GALLTFGWGLYGQCGQGS 336
           G +  +G+  +GQ G GS
Sbjct: 713 GTVWAWGYNSFGQLGNGS 730


>gi|193785714|dbj|BAG51149.1| unnamed protein product [Homo sapiens]
          Length = 551

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/176 (36%), Positives = 102/176 (57%), Gaps = 7/176 (3%)

Query: 303 KGIAC----GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS-LLGIQIEGV 357
           K IAC     G H  + T  G + T+G   Y Q G G+T+  L P  +S+ L   Q+  V
Sbjct: 98  KKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV 157

Query: 358 AAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARH 417
           A G +H++ ++SDG+V+A+G N  GQ+G+G    + +PR +    L+N    +++CG   
Sbjct: 158 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTG-CLQNKVVVTIACGQMC 216

Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
              + D G+V+ WG+N  GQLGLG+  ++  P +V  ++G   + VACG+ HTL+L
Sbjct: 217 CMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 272



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 122/244 (50%), Gaps = 31/244 (12%)

Query: 214 LVTLNPGVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIE 272
           L +LN G +IA ++ G G H +  +  G+V+ WG+    QLG G+     ++   +PC  
Sbjct: 92  LDSLN-GKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT-----TNHGLVPCHI 145

Query: 273 SSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQC 332
           S+                      +    V  +ACG  HS V+T  G +  +G+   GQ 
Sbjct: 146 ST---------------------NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQV 184

Query: 333 GQGSTDDELSPNCVSSLLGIQIE-GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
           G GST ++  P  V+  L  ++   +A G    + +   G+VY +G N  GQLG G    
Sbjct: 185 GSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGN 244

Query: 392 ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
           +  P  + A  L+ +  + V+CG  HT V+ D+G+V+ WG N YGQLG G+  +++ P+ 
Sbjct: 245 QPTPCRVAA--LQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 302

Query: 452 VTIE 455
           VT+E
Sbjct: 303 VTVE 306



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 109/231 (47%), Gaps = 30/231 (12%)

Query: 203 SGDENLSAFPCLVTLN-PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +G  N    PC ++ N    ++  VA G  H+L L+  G+V+ WGY   GQ+G GS +  
Sbjct: 133 NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVN- 191

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
                PIP         R     +  V             V  IACG      + D G +
Sbjct: 192 ----QPIP--------RRVTGCLQNKV-------------VVTIACGQMCCMAVVDTGEV 226

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             +G+   GQ G G++ ++ +P  V++L GI+++ VA G  HT+ ++ +G VYA+G N +
Sbjct: 227 YVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSY 286

Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           GQLGTG    ++ P  +       +  +  +C + HT A     G V+ WG
Sbjct: 287 GQLGTGNKSNQSYPTPVTVEKDRII--EIAACHSTHTSAAKTQGGHVYMWG 335



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 56/115 (48%), Gaps = 23/115 (20%)

Query: 370 DGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR----HTAVIADDG 425
           + +++  G N  G LG G  Q+   PR LD+     ++ K ++C +     H  +   +G
Sbjct: 64  NDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS-----LNGKKIACLSYGSGPHIVLATTEG 118

Query: 426 KVFCWGWNKYGQLGLGDV--------IDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           +VF WG N Y QLG G          I  N+ ++  IE      VACG +H+L+L
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIE------VACGSYHSLVL 167



 Score = 39.7 bits (91), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 55/133 (41%), Gaps = 17/133 (12%)

Query: 14  VFMWGYL-PGALPQRSPILSPLVVRLP--LTVGSAWRDVCGGGCGFAMAISDSRKLITWG 70
           VF WGY   G +   S +  P+  R+   L         CG  C   MA+ D+ ++  WG
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMC--CMAVVDTGEVYVWG 230

Query: 71  STDDLGQSYVTSGKHGEIPEPFPLPTEASI--VKAAAGWAHCVAVTEGGEVYTWGWKECV 128
                G   +  G  G  P P  +     I   + A G+AH + +T+ G+VY WG     
Sbjct: 231 YN---GNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG----- 282

Query: 129 PSGRVFGDLSTGT 141
                +G L TG 
Sbjct: 283 --ANSYGQLGTGN 293


>gi|4557445|ref|NP_001259.1| RCC1 and BTB domain-containing protein 2 [Homo sapiens]
 gi|197099869|ref|NP_001125174.1| RCC1 and BTB domain-containing protein 2 isoform 1 [Pongo abelii]
 gi|332241903|ref|XP_003270124.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Nomascus leucogenys]
 gi|397480404|ref|XP_003811474.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1 [Pan
           paniscus]
 gi|426375447|ref|XP_004054550.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 1
           [Gorilla gorilla gorilla]
 gi|74739686|sp|O95199.1|RCBT2_HUMAN RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
           Full=Chromosome condensation 1-like; Short=CHC1-L;
           AltName: Full=RCC1-like G exchanging factor; AltName:
           Full=Regulator of chromosome condensation and BTB
           domain-containing protein 2
 gi|75042250|sp|Q5RCZ7.1|RCBT2_PONAB RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
           Full=Regulator of chromosome condensation and BTB
           domain-containing protein 2
 gi|3789799|gb|AAC79987.1| RCC1-like G exchanging factor RLG [Homo sapiens]
 gi|20810515|gb|AAH29052.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Homo sapiens]
 gi|32891797|gb|AAP88928.1| chromosome condensation 1-like [Homo sapiens]
 gi|55727208|emb|CAH90360.1| hypothetical protein [Pongo abelii]
 gi|119629204|gb|EAX08799.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2, isoform CRA_a [Homo sapiens]
 gi|123979830|gb|ABM81744.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [synthetic construct]
 gi|124000595|gb|ABM87806.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [synthetic construct]
 gi|189055081|dbj|BAG38065.1| unnamed protein product [Homo sapiens]
          Length = 551

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/176 (36%), Positives = 102/176 (57%), Gaps = 7/176 (3%)

Query: 303 KGIAC----GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS-LLGIQIEGV 357
           K IAC     G H  + T  G + T+G   Y Q G G+T+  L P  +S+ L   Q+  V
Sbjct: 98  KKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV 157

Query: 358 AAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARH 417
           A G +H++ ++SDG+V+A+G N  GQ+G+G    + +PR +    L+N    +++CG   
Sbjct: 158 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTG-CLQNKVVVTIACGQMC 216

Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
              + D G+V+ WG+N  GQLGLG+  ++  P +V  ++G   + VACG+ HTL+L
Sbjct: 217 CMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 272



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 122/244 (50%), Gaps = 31/244 (12%)

Query: 214 LVTLNPGVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIE 272
           L +LN G +IA ++ G G H +  +  G+V+ WG+    QLG G+     ++   +PC  
Sbjct: 92  LDSLN-GKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT-----TNHGLVPCHI 145

Query: 273 SSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQC 332
           S+                      +    V  +ACG  HS V+T  G +  +G+   GQ 
Sbjct: 146 ST---------------------NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQV 184

Query: 333 GQGSTDDELSPNCVSSLLGIQIE-GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
           G GST ++  P  V+  L  ++   +A G    + +   G+VY +G N  GQLG G    
Sbjct: 185 GSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGN 244

Query: 392 ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
           +  P  + A  L+ +  + V+CG  HT V+ D+G+V+ WG N YGQLG G+  +++ P+ 
Sbjct: 245 QPTPCRVAA--LQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 302

Query: 452 VTIE 455
           VT+E
Sbjct: 303 VTVE 306



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 109/231 (47%), Gaps = 30/231 (12%)

Query: 203 SGDENLSAFPCLVTLN-PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +G  N    PC ++ N    ++  VA G  H+L L+  G+V+ WGY   GQ+G GS +  
Sbjct: 133 NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVN- 191

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
                PIP         R     +  V             V  IACG      + D G +
Sbjct: 192 ----QPIP--------RRVTGCLQNKV-------------VVTIACGQMCCMAVVDTGEV 226

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             +G+   GQ G G++ ++ +P  V++L GI+++ VA G  HT+ ++ +G VYA+G N +
Sbjct: 227 YVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSY 286

Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           GQLGTG    ++ P  +       +  +  +C + HT A     G V+ WG
Sbjct: 287 GQLGTGNKSNQSYPTPVTVEKDRII--EIAACHSTHTSAAKTQGGHVYMWG 335



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 56/115 (48%), Gaps = 23/115 (20%)

Query: 370 DGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR----HTAVIADDG 425
           + +++  G N  G LG G  Q+   PR LD+     ++ K ++C +     H  +   +G
Sbjct: 64  NDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS-----LNGKKIACLSYGSGPHIVLATTEG 118

Query: 426 KVFCWGWNKYGQLGLGDV--------IDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           +VF WG N Y QLG G          I  N+ ++  IE      VACG +H+L+L
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIE------VACGSYHSLVL 167



 Score = 39.7 bits (91), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 55/133 (41%), Gaps = 17/133 (12%)

Query: 14  VFMWGYL-PGALPQRSPILSPLVVRLP--LTVGSAWRDVCGGGCGFAMAISDSRKLITWG 70
           VF WGY   G +   S +  P+  R+   L         CG  C   MA+ D+ ++  WG
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMC--CMAVVDTGEVYVWG 230

Query: 71  STDDLGQSYVTSGKHGEIPEPFPLPTEASI--VKAAAGWAHCVAVTEGGEVYTWGWKECV 128
                G   +  G  G  P P  +     I   + A G+AH + +T+ G+VY WG     
Sbjct: 231 YN---GNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG----- 282

Query: 129 PSGRVFGDLSTGT 141
                +G L TG 
Sbjct: 283 --ANSYGQLGTGN 293


>gi|403303294|ref|XP_003942271.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
           [Saimiri boliviensis boliviensis]
          Length = 556

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/176 (36%), Positives = 102/176 (57%), Gaps = 7/176 (3%)

Query: 303 KGIAC----GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS-LLGIQIEGV 357
           K IAC     G H  + T  G + T+G   Y Q G G+T+  L P  +S+ L   Q+  V
Sbjct: 103 KKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV 162

Query: 358 AAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARH 417
           A G +H++ ++SDG+V+A+G N  GQ+G+G    + +PR +    L+N    +++CG   
Sbjct: 163 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTINQPIPRRVTG-CLQNKVVVTIACGQMC 221

Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
              + D G+V+ WG+N  GQLGLG+  ++  P +V  ++G   + VACG+ HTL+L
Sbjct: 222 CMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 277



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 122/253 (48%), Gaps = 31/253 (12%)

Query: 220 GVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
           G +IA ++ G G H +  +  G+V+ WG+    QLG G+     ++   +PC  S+    
Sbjct: 102 GKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT-----TNHGLVPCHIST---- 152

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
                             +    V  +ACG  HS V+T  G +  +G+   GQ G GST 
Sbjct: 153 -----------------NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTI 195

Query: 339 DELSPNCVSSLLGIQIE-GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
           ++  P  V+  L  ++   +A G    + +   G+VY +G N  GQLG G    +  P  
Sbjct: 196 NQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTP-- 253

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE-G 456
               +L+ +  + V+CG  HT V+ D+G+V+ WG N YGQLG G+  +++ P+ VT+E  
Sbjct: 254 CRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKD 313

Query: 457 CVPRNVACGWWHT 469
            +    AC   HT
Sbjct: 314 RIIEIAACHSTHT 326



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 70/231 (30%), Positives = 110/231 (47%), Gaps = 30/231 (12%)

Query: 203 SGDENLSAFPCLVTLN-PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +G  N    PC ++ N    ++  VA G  H+L L+  G+V+ WGY   GQ+G GS I  
Sbjct: 138 NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTIN- 196

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
                PIP         R     +  V             V  IACG      + D+G +
Sbjct: 197 ----QPIP--------RRVTGCLQNKV-------------VVTIACGQMCCMAVVDSGEV 231

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             +G+   GQ G G++ ++ +P  V++L GI+++ VA G  HT+ ++ +G VYA+G N +
Sbjct: 232 YVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSY 291

Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           GQLGTG    ++ P  +       +  +  +C + HT A     G V+ WG
Sbjct: 292 GQLGTGNKSNQSYPTPVTVEKDRII--EIAACHSTHTSAAKTQGGHVYMWG 340



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 15/111 (13%)

Query: 370 DGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFC 429
           + +++  G N  G LG G  Q+   PR LD+ S + +   S   G  H  +   +G+VF 
Sbjct: 69  NDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGP-HIVLATTEGEVFT 127

Query: 430 WGWNKYGQLGLGDV--------IDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           WG N Y QLG G          I  N+ ++  IE      VACG +H+L+L
Sbjct: 128 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIE------VACGSYHSLVL 172



 Score = 40.8 bits (94), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 55/133 (41%), Gaps = 17/133 (12%)

Query: 14  VFMWGYL-PGALPQRSPILSPLVVRLP--LTVGSAWRDVCGGGCGFAMAISDSRKLITWG 70
           VF WGY   G +   S I  P+  R+   L         CG  C   MA+ DS ++  WG
Sbjct: 178 VFAWGYNNSGQVGSGSTINQPIPRRVTGCLQNKVVVTIACGQMC--CMAVVDSGEVYVWG 235

Query: 71  STDDLGQSYVTSGKHGEIPEPFPLPTEASI--VKAAAGWAHCVAVTEGGEVYTWGWKECV 128
                G   +  G  G  P P  +     I   + A G+AH + +T+ G+VY WG     
Sbjct: 236 YN---GNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG----- 287

Query: 129 PSGRVFGDLSTGT 141
                +G L TG 
Sbjct: 288 --ANSYGQLGTGN 298


>gi|395541966|ref|XP_003772907.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3, partial
           [Sarcophilus harrisii]
          Length = 638

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 92/308 (29%), Positives = 137/308 (44%), Gaps = 51/308 (16%)

Query: 84  KHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGL 143
           + G  PE      +  IV  A G +H +A+++ G++++WG           G L   T  
Sbjct: 71  REGNKPEQIGALADQHIVHVACGESHSLALSDQGQLFSWG-------AGSDGQLGHTTTE 123

Query: 144 DKDVFERQSSFLTEQVSPRSQVSRSSGG---TSSGTDGRGSGEEGSKRRRISLAKQTAES 200
           D     R    L ++++ +  +  S G     +   DG+      ++  ++ L K+    
Sbjct: 124 DSVAIPR----LIKKLNQQMILQVSCGNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQ 179

Query: 201 SSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR 260
           +S         P  V    G+ +A VAAGG H+ ALS  G V+GWG    GQLGL     
Sbjct: 180 AS---------PQRVKSLEGIPLAQVAAGGAHSFALSLSGAVFGWGRNNAGQLGLSDETD 230

Query: 261 MVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA 320
             S     PC            L R                V  I+CG  H+AV+T +G 
Sbjct: 231 RQS-----PC---------HVKLLR-------------TQKVVYISCGEEHTAVLTKSGG 263

Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFGGN 379
           + TFG G +GQ G  S +DE++P  V  L+G ++  +A G  HT+  + S G +YAFG  
Sbjct: 264 VFTFGAGSFGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 323

Query: 380 QFGQLGTG 387
             GQLGTG
Sbjct: 324 ARGQLGTG 331



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 117/253 (46%), Gaps = 34/253 (13%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  VA GG H++ L + G+V+  G   +GQLG     R  + P  I  +           
Sbjct: 37  IKEVACGGNHSIFLLEDGEVYTCGSNTKGQLG---HEREGNKPEQIGALAD--------- 84

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                             ++  +ACG  HS  ++D G L ++G G  GQ G  +T+D ++
Sbjct: 85  -----------------QHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVA 127

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD-QAETLPRLLDA 400
            P  +  L    I  V+ G WH + +++DG  + +G N+ GQLG G +  ++  P+    
Sbjct: 128 IPRLIKKLNQQMILQVSCGNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQASPQ--RV 185

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVP- 459
            SLE +    V+ G  H+  ++  G VF WG N  GQLGL D  DR  P  V +      
Sbjct: 186 KSLEGIPLAQVAAGGAHSFALSLSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKV 245

Query: 460 RNVACGWWHTLLL 472
             ++CG  HT +L
Sbjct: 246 VYISCGEEHTAVL 258



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 80/261 (30%), Positives = 113/261 (43%), Gaps = 34/261 (13%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES-------- 273
            I  VA G  H+LALSD GQ++ WG G +GQLG  +    V+ P  I  +          
Sbjct: 86  HIVHVACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQQMILQVSC 145

Query: 274 ---------------SYGKDRSAALSRGS-VNSEGPGFRVP---GNYVKGIACGGRHSAV 314
                          ++G++R   L  G    S+    RV    G  +  +A GG HS  
Sbjct: 146 GNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGIPLAQVAAGGAHSFA 205

Query: 315 ITDAGALLTFGWGLY--GQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGD 372
           ++ +GA+  FGWG    GQ G     D  SP  V  L   ++  ++ G  HT  ++  G 
Sbjct: 206 LSLSGAV--FGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 263

Query: 373 VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           V+ FG   FGQLG      E  PR      L       ++CG +HT A +   G ++ +G
Sbjct: 264 VFTFGAGSFGQLGHDSMNDEVNPR--RVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 321

Query: 432 WNKYGQLGLGDVIDRNIPSQV 452
               GQLG G   +   PS V
Sbjct: 322 CGARGQLGTGHTCNVKCPSPV 342



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/180 (32%), Positives = 92/180 (51%), Gaps = 15/180 (8%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           +K +ACGG HS  + + G + T G    GQ G     ++  P  + +L    I  VA G 
Sbjct: 37  IKEVACGGNHSIFLLEDGEVYTCGSNTKGQLGHEREGNK--PEQIGALADQHIVHVACGE 94

Query: 362 WHTICISSDGDVYAFGGNQFGQLG-TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            H++ +S  G ++++G    GQLG T  + +  +PRL+   + + +    VSCG  H   
Sbjct: 95  SHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQQMI--LQVSCGNWHCMA 152

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV------TIEGCVPRNVACGWWHTLLLAV 474
           +A DG+ F WG N++GQLGLG    +  PSQ       ++EG     VA G  H+  L++
Sbjct: 153 LAADGQFFTWGQNRHGQLGLG----KEFPSQASPQRVKSLEGIPLAQVAAGGAHSFALSL 208


>gi|340721971|ref|XP_003399386.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Bombus
           terrestris]
          Length = 539

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/279 (27%), Positives = 135/279 (48%), Gaps = 37/279 (13%)

Query: 203 SGDENLSAFPCLVTLNPGVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +GD + + +P  +    G  + T A G G H LAL++ G+V+ WGY    +LG       
Sbjct: 61  TGDTHSTIYPKKIEALCGKSVKTFAYGKGPHVLALTEEGKVYSWGYNDYCELG------- 113

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
                       S  +  +  L   ++N+E         +V  IACGG HS  +T+ G +
Sbjct: 114 ----------NRSTNEGLTPTLIPSALNNE---------FVVDIACGGHHSLALTNKGEV 154

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG-----VAAGLWHTICISSDGDVYAF 376
             +G  + GQ G G+    + P  +  LL I + G     ++ G   ++ ++ +G+VY++
Sbjct: 155 YAWGHNVSGQVGCGTILSTVQP--IPKLLHIVLNGKKVVHISCGDSSSVAVTDNGEVYSW 212

Query: 377 GGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYG 436
           G N  GQLG G   ++  P+     +   +  + V CG  HT  ++D+G ++ WG N YG
Sbjct: 213 GHNGVGQLGIGNCTSQAEPQ--KVATFAKIVIEKVVCGYMHTLALSDEGDLYVWGANSYG 270

Query: 437 QLGLGDVIDRNIPSQVTI-EGCVPRNVACGWWHTLLLAV 474
           QLGL    +  IP+++ + E     ++A   +H + LA+
Sbjct: 271 QLGLNTDSNVWIPTKLQVPEMGRILDIATSHYHHISLAM 309



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 101/209 (48%), Gaps = 24/209 (11%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  +A GG H+LAL++ G+V+ WG+   GQ+G G+   ++S+  PIP             
Sbjct: 135 VVDIACGGHHSLALTNKGEVYAWGHNVSGQVGCGT---ILSTVQPIP------------K 179

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
           L    +N         G  V  I+CG   S  +TD G + ++G    GQ G G+   +  
Sbjct: 180 LLHIVLN---------GKKVVHISCGDSSSVAVTDNGEVYSWGHNGVGQLGIGNCTSQAE 230

Query: 343 PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPS 402
           P  V++   I IE V  G  HT+ +S +GD+Y +G N +GQLG   D    +P  L  P 
Sbjct: 231 PQKVATFAKIVIEKVVCGYMHTLALSDEGDLYVWGANSYGQLGLNTDSNVWIPTKLQVPE 290

Query: 403 LENVHSKSVSCGARHTAVIADDGKVFCWG 431
           +  +   + S     +  +++  ++F WG
Sbjct: 291 MGRILDIATSHYHHISLAMSEGNRIFMWG 319



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 77/163 (47%), Gaps = 6/163 (3%)

Query: 308 GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW-HTIC 366
               + ++T    +   G   YG  G G T   + P  + +L G  ++  A G   H + 
Sbjct: 35  AANETLIVTKDDMVYGIGNNTYGCLGTGDTHSTIYPKKIEALCGKSVKTFAYGKGPHVLA 94

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           ++ +G VY++G N + +LG         P L+ + +L N     ++CG  H+  + + G+
Sbjct: 95  LTEEGKVYSWGYNDYCELGNRSTNEGLTPTLIPS-ALNNEFVVDIACGGHHSLALTNKGE 153

Query: 427 VFCWGWNKYGQLGLGDVID--RNIPS--QVTIEGCVPRNVACG 465
           V+ WG N  GQ+G G ++   + IP    + + G    +++CG
Sbjct: 154 VYAWGHNVSGQVGCGTILSTVQPIPKLLHIVLNGKKVVHISCG 196



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 69/136 (50%), Gaps = 9/136 (6%)

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
           L P  +S++    + G AA    T+ ++ D  VY  G N +G LGTG   +   P+ ++A
Sbjct: 18  LEPKFISNVRMAIVYGKAAN--ETLIVTKDDMVYGIGNNTYGCLGTGDTHSTIYPKKIEA 75

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVID----RNIPSQVTIEG 456
              ++V + +   G  H   + ++GKV+ WG+N Y +LG     +      IPS +  E 
Sbjct: 76  LCGKSVKTFAYGKGP-HVLALTEEGKVYSWGYNDYCELGNRSTNEGLTPTLIPSALNNEF 134

Query: 457 CVPRNVACGWWHTLLL 472
            V  ++ACG  H+L L
Sbjct: 135 VV--DIACGGHHSLAL 148



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 62/205 (30%), Positives = 81/205 (39%), Gaps = 24/205 (11%)

Query: 57  AMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFP--LPTEASIVKAAAGWAHCVA 112
            +A+++  K+ +WG  D  +LG     S   G  P   P  L  E  +V  A G  H +A
Sbjct: 92  VLALTEEGKVYSWGYNDYCELGNR---STNEGLTPTLIPSALNNEF-VVDIACGGHHSLA 147

Query: 113 VTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGT 172
           +T  GEVY WG         V G +  GT L      +    L   V    +V   S G 
Sbjct: 148 LTNKGEVYAWG-------HNVSGQVGCGTILST---VQPIPKLLHIVLNGKKVVHISCGD 197

Query: 173 SSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRH 232
           SS      +GE        S           G+    A P  V     + I  V  G  H
Sbjct: 198 SSSVAVTDNGE------VYSWGHNGVGQLGIGNCTSQAEPQKVATFAKIVIEKVVCGYMH 251

Query: 233 TLALSDIGQVWGWGYGGEGQLGLGS 257
           TLALSD G ++ WG    GQLGL +
Sbjct: 252 TLALSDEGDLYVWGANSYGQLGLNT 276


>gi|149033226|gb|EDL88027.1| hect domain and RLD 3 (predicted), isoform CRA_b [Rattus
           norvegicus]
          Length = 909

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 113/254 (44%), Gaps = 30/254 (11%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
            I  VA G  H+LALSD GQ++ WG G +GQLGL +    V+ P  I             
Sbjct: 85  HIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ------------ 132

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDE 340
                         ++    +  ++CG  H   +   G   T+G   +GQ G G     +
Sbjct: 133 --------------KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
            SP  V SL GI +  VAAG  H+  +S  G V+ +G N  GQLG   ++    P  +  
Sbjct: 179 TSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKL 238

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVP 459
              + V    +SCG  HTAV+   G VF +G    GQLG   V D   P +V  + G   
Sbjct: 239 LRTQKV--VYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEV 296

Query: 460 RNVACGWWHTLLLA 473
             +ACG  HTL L 
Sbjct: 297 TQIACGRQHTLALV 310



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 138/308 (44%), Gaps = 51/308 (16%)

Query: 84  KHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGL 143
           + G  PE      +  I+  A G +H +A+++ G++++WG           G L   T  
Sbjct: 70  REGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG-------AGSDGQLGLMTTE 122

Query: 144 DKDVFERQSSFLTEQVSPRSQVSRSSGG---TSSGTDGRGSGEEGSKRRRISLAKQTAES 200
           D     R    L ++++ ++ +  S G     +   DG+      +   ++ L K+    
Sbjct: 123 DSVAVPR----LIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 201 SSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR 260
           +S         P  V    G+ +A VAAGG H+ ALS  G V+GWG    GQLGL     
Sbjct: 179 TS---------PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE-- 227

Query: 261 MVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA 320
                           KDR +      + ++          V  I+CG  H+AV+T +G 
Sbjct: 228 ----------------KDRESPCHVKLLRTQK---------VVYISCGEEHTAVLTKSGG 262

Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFGGN 379
           + TFG G  GQ G  S +DE++P  V  L+G ++  +A G  HT+  + S G +YAFG  
Sbjct: 263 VFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCG 322

Query: 380 QFGQLGTG 387
             GQLGTG
Sbjct: 323 AKGQLGTG 330



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 82/276 (29%), Positives = 126/276 (45%), Gaps = 38/276 (13%)

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           SS  + + A P +        I  VA GG H++ L + G+V+  G   +GQLG     R 
Sbjct: 15  SSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLG---HERE 71

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
            + P  I  +                             ++  +ACG  HS  ++D G L
Sbjct: 72  GNKPEQIGALAD--------------------------QHIIHVACGESHSLALSDRGQL 105

Query: 322 LTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
            ++G G  GQ G  +T+D ++ P  +  L    I  V+ G WH + +++DG  + +G N 
Sbjct: 106 FSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNS 165

Query: 381 FGQLGTGGD-QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG 439
            GQLG G +  ++T P+     SLE +    V+ G  H+  ++  G VF WG N  GQLG
Sbjct: 166 HGQLGLGKEFPSQTSPQ--RVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223

Query: 440 LGDVIDRNIPSQVTI---EGCVPRNVACGWWHTLLL 472
           L D  DR  P  V +   +  V   ++CG  HT +L
Sbjct: 224 LSDEKDRESPCHVKLLRTQKVV--YISCGEEHTAVL 257



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 101/402 (25%), Positives = 157/402 (39%), Gaps = 87/402 (21%)

Query: 39  PLTVGS-AWRDVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLP 95
           P  +G+ A + +    CG   ++A+SD  +L +WG+  D     +T+     +P      
Sbjct: 75  PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 96  TEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFL 155
            + +I++ + G  HC+A+   G+ +TWG           G L    GL K+         
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWG-------KNSHGQL----GLGKE--------F 175

Query: 156 TEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLA-------KQTAESSSSGDENL 208
             Q SP  Q  RS  G        G    G+    +SL+          A      DE  
Sbjct: 176 PSQTSP--QRVRSLEGIPLAQVAAG----GAHSFALSLSGAVFGWGMNNAGQLGLSDEKD 229

Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
              PC V L    ++  ++ G  HT  L+  G V+ +G G  GQLG              
Sbjct: 230 RESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG-------------- 275

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFRV---PGNYVKGIACGGRHS-AVITDAGALLTF 324
                             SVN E    RV    G+ V  IACG +H+ A++  +G +  F
Sbjct: 276 ----------------HDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAF 319

Query: 325 GWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFG 382
           G G  GQ G G T +   P+ V             G W  H+  +S+  D + +      
Sbjct: 320 GCGAKGQLGTGHTCNVKCPSPVK------------GHWAAHSGQLSARADRFKY--RVVK 365

Query: 383 QLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           Q+ +GGDQ   L    +  S   V  ++V+  A +T +I D+
Sbjct: 366 QIFSGGDQTFVLCSTYENSS-PAVDFRTVN-QAHYTNLINDE 405



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/124 (35%), Positives = 62/124 (50%), Gaps = 10/124 (8%)

Query: 354 IEGVAAGLWHTICISSDGDVYAFGGNQFGQLG--TGGDQAETLPRLLDAPSLENVHSKSV 411
           I+ VA G  H++ +  DG+VY  G N  GQLG    G++ E +  L D       H   V
Sbjct: 36  IKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKPEQIGALADQ------HIIHV 89

Query: 412 SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR-NIPSQV-TIEGCVPRNVACGWWHT 469
           +CG  H+  ++D G++F WG    GQLGL    D   +P  +  +       V+CG WH 
Sbjct: 90  ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149

Query: 470 LLLA 473
           L LA
Sbjct: 150 LALA 153


>gi|426236323|ref|XP_004012119.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Ovis aries]
          Length = 527

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/176 (36%), Positives = 102/176 (57%), Gaps = 7/176 (3%)

Query: 303 KGIAC----GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS-LLGIQIEGV 357
           K IAC     G H  + T  G + T+G   Y Q G G+T+  L P  +S+ L   Q+  V
Sbjct: 74  KKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEV 133

Query: 358 AAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARH 417
           A G +H++ ++SDG+V+A+G N  GQ+G+G    + +PR +    L+N    +++CG   
Sbjct: 134 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTG-CLQNKVVVNIACGQMC 192

Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLL 472
           +  + + G+VF WG+N  GQLGLG   ++  P +V  ++G   + VACG+ HTL+L
Sbjct: 193 SMAVVNTGEVFVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 248



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 117/238 (49%), Gaps = 30/238 (12%)

Query: 220 GVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
           G +IA ++ G G H +  +  G+V+ WG+    QLG G+                     
Sbjct: 73  GKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTT-------------------- 112

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
            +A L    +++      +    V  +ACG  HS V+T  G +  +G+   GQ G GST 
Sbjct: 113 -NAGLVPYHIST-----NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTA 166

Query: 339 DELSPNCVSSLLGIQIE-GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
           ++  P  V+  L  ++   +A G   ++ + + G+V+ +G N  GQLG G    +  P  
Sbjct: 167 NQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGSSGNQPTP-- 224

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
               +L+ +  + V+CG  HT V+ D+G+V+ WG N YGQLG G+  +++ P+ V +E
Sbjct: 225 CRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVVE 282



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 113/233 (48%), Gaps = 34/233 (14%)

Query: 203 SGDENLSAFPCLVTLN-PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +G  N    P  ++ N    ++  VA G  H+L L+  G+V+ WGY   GQ+G GS    
Sbjct: 109 NGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---- 164

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
            ++  PIP         R     +  V             V  IACG   S  + + G +
Sbjct: 165 -TANQPIP--------RRVTGCLQNKV-------------VVNIACGQMCSMAVVNTGEV 202

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             +G+   GQ G GS+ ++ +P  V++L GI+++ VA G  HT+ ++ +G VYA+G N +
Sbjct: 203 FVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSY 262

Query: 382 GQLGTGG--DQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           GQLGTG   +Q+   P +++   +  +     +C + HT A     G V+ WG
Sbjct: 263 GQLGTGNKSNQSYPTPVVVEKDRIIEI----AACHSAHTSAAKTQGGHVYMWG 311



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 54/111 (48%), Gaps = 15/111 (13%)

Query: 370 DGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFC 429
           + +++  G N  G LG G  Q+   PR LD+ + + +   S   G  H  +   +G+VF 
Sbjct: 40  NDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLTGKKIACLSYGSGP-HIVLATTEGEVFT 98

Query: 430 WGWNKYGQLGLGDV--------IDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           WG N Y QLG G          I  N+ ++  IE      VACG +H+L+L
Sbjct: 99  WGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIE------VACGSYHSLVL 143


>gi|157820833|ref|NP_001102101.1| probable E3 ubiquitin-protein ligase HERC3 [Rattus norvegicus]
 gi|149033223|gb|EDL88024.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
           norvegicus]
 gi|149033224|gb|EDL88025.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
           norvegicus]
 gi|149033225|gb|EDL88026.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
           norvegicus]
          Length = 1050

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 113/254 (44%), Gaps = 30/254 (11%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
            I  VA G  H+LALSD GQ++ WG G +GQLGL +    V+ P  I             
Sbjct: 85  HIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ------------ 132

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDE 340
                         ++    +  ++CG  H   +   G   T+G   +GQ G G     +
Sbjct: 133 --------------KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
            SP  V SL GI +  VAAG  H+  +S  G V+ +G N  GQLG   ++    P  +  
Sbjct: 179 TSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKL 238

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVP 459
              + V    +SCG  HTAV+   G VF +G    GQLG   V D   P +V  + G   
Sbjct: 239 LRTQKV--VYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEV 296

Query: 460 RNVACGWWHTLLLA 473
             +ACG  HTL L 
Sbjct: 297 TQIACGRQHTLALV 310



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 140/308 (45%), Gaps = 51/308 (16%)

Query: 84  KHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGL 143
           + G  PE      +  I+  A G +H +A+++ G++++WG      +G   G L   T  
Sbjct: 70  REGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG------AGSD-GQLGLMTTE 122

Query: 144 DKDVFERQSSFLTEQVSPRSQVSRSSGG---TSSGTDGRGSGEEGSKRRRISLAKQTAES 200
           D     R    L ++++ ++ +  S G     +   DG+      +   ++ L K+    
Sbjct: 123 DSVAVPR----LIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 201 SSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR 260
           +S         P  V    G+ +A VAAGG H+ ALS  G V+GWG    GQLGL     
Sbjct: 179 TS---------PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE-- 227

Query: 261 MVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA 320
                           KDR +      + ++          V  I+CG  H+AV+T +G 
Sbjct: 228 ----------------KDRESPCHVKLLRTQK---------VVYISCGEEHTAVLTKSGG 262

Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFGGN 379
           + TFG G  GQ G  S +DE++P  V  L+G ++  +A G  HT+  + S G +YAFG  
Sbjct: 263 VFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCG 322

Query: 380 QFGQLGTG 387
             GQLGTG
Sbjct: 323 AKGQLGTG 330



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 82/276 (29%), Positives = 126/276 (45%), Gaps = 38/276 (13%)

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           SS  + + A P +        I  VA GG H++ L + G+V+  G   +GQLG     R 
Sbjct: 15  SSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLG---HERE 71

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
            + P  I  +                             ++  +ACG  HS  ++D G L
Sbjct: 72  GNKPEQIGALAD--------------------------QHIIHVACGESHSLALSDRGQL 105

Query: 322 LTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
            ++G G  GQ G  +T+D ++ P  +  L    I  V+ G WH + +++DG  + +G N 
Sbjct: 106 FSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNS 165

Query: 381 FGQLGTGGD-QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG 439
            GQLG G +  ++T P+     SLE +    V+ G  H+  ++  G VF WG N  GQLG
Sbjct: 166 HGQLGLGKEFPSQTSPQ--RVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223

Query: 440 LGDVIDRNIPSQVTI---EGCVPRNVACGWWHTLLL 472
           L D  DR  P  V +   +  V   ++CG  HT +L
Sbjct: 224 LSDEKDRESPCHVKLLRTQKVV--YISCGEEHTAVL 257



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 101/402 (25%), Positives = 157/402 (39%), Gaps = 87/402 (21%)

Query: 39  PLTVGS-AWRDVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLP 95
           P  +G+ A + +    CG   ++A+SD  +L +WG+  D     +T+     +P      
Sbjct: 75  PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 96  TEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFL 155
            + +I++ + G  HC+A+   G+ +TWG           G L    GL K+         
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWG-------KNSHGQL----GLGKE--------F 175

Query: 156 TEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLA-------KQTAESSSSGDENL 208
             Q SP  Q  RS  G        G    G+    +SL+          A      DE  
Sbjct: 176 PSQTSP--QRVRSLEGIPLAQVAAG----GAHSFALSLSGAVFGWGMNNAGQLGLSDEKD 229

Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
              PC V L    ++  ++ G  HT  L+  G V+ +G G  GQLG              
Sbjct: 230 RESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG-------------- 275

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFRV---PGNYVKGIACGGRHS-AVITDAGALLTF 324
                             SVN E    RV    G+ V  IACG +H+ A++  +G +  F
Sbjct: 276 ----------------HDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAF 319

Query: 325 GWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFG 382
           G G  GQ G G T +   P+ V             G W  H+  +S+  D + +      
Sbjct: 320 GCGAKGQLGTGHTCNVKCPSPVK------------GHWAAHSGQLSARADRFKY--RVVK 365

Query: 383 QLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           Q+ +GGDQ   L    +  S   V  ++V+  A +T +I D+
Sbjct: 366 QIFSGGDQTFVLCSTYENSS-PAVDFRTVN-QAHYTNLINDE 405



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/124 (35%), Positives = 62/124 (50%), Gaps = 10/124 (8%)

Query: 354 IEGVAAGLWHTICISSDGDVYAFGGNQFGQLG--TGGDQAETLPRLLDAPSLENVHSKSV 411
           I+ VA G  H++ +  DG+VY  G N  GQLG    G++ E +  L D       H   V
Sbjct: 36  IKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKPEQIGALADQ------HIIHV 89

Query: 412 SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR-NIPSQV-TIEGCVPRNVACGWWHT 469
           +CG  H+  ++D G++F WG    GQLGL    D   +P  +  +       V+CG WH 
Sbjct: 90  ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149

Query: 470 LLLA 473
           L LA
Sbjct: 150 LALA 153


>gi|428176135|gb|EKX45021.1| hypothetical protein GUITHDRAFT_71654 [Guillardia theta CCMP2712]
          Length = 364

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 96/176 (54%), Gaps = 2/176 (1%)

Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDELSPNCVSSLLGIQIEGV 357
           G  +  +ACG  H+ + T+ G + +FGW +YGQ G G   D   +P  + SL G +++ V
Sbjct: 77  GVRINSLACGRAHAVLTTEEGDVWSFGWNMYGQLGLGLQYDHTRTPQLLESLRGPKLQDV 136

Query: 358 AAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARH 417
           A G  H + + SDG ++A+G N+ GQL  G  + + +P  ++ P         ++CG  H
Sbjct: 137 ACGGQHAVVMLSDGSLFAWGRNEEGQLAIGSLEPKLIPSRVETPWRGEERVVQLACGFSH 196

Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
           TA +   G+VFC G    GQLG+G   +  +P+ V  IE     ++ CG  HT+++
Sbjct: 197 TAFLTSSGRVFCSGQGDSGQLGIGSKSNSLVPALVLGIERAHVGSLVCGHSHTMVV 252



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 102/223 (45%), Gaps = 31/223 (13%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           GVRI ++A G  H +  ++ G VW +G+   GQLGLG +     +P  +  +        
Sbjct: 77  GVRINSLACGRAHAVLTTEEGDVWSFGWNMYGQLGLGLQYDHTRTPQLLESLR------- 129

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDD 339
                              G  ++ +ACGG+H+ V+   G+L  +G    GQ   GS + 
Sbjct: 130 -------------------GPKLQDVACGGQHAVVMLSDGSLFAWGRNEEGQLAIGSLEP 170

Query: 340 ELSPNCVSSLL--GIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
           +L P+ V +      ++  +A G  HT  ++S G V+  G    GQLG G      +P L
Sbjct: 171 KLIPSRVETPWRGEERVVQLACGFSHTAFLTSSGRVFCSGQGDSGQLGIGSKSNSLVPAL 230

Query: 398 LDAPSLENVHSKSVSCGARHTAVI-ADDGKVFCWGWNKYGQLG 439
           +    +E  H  S+ CG  HT V+ A+    F WG N  G+LG
Sbjct: 231 V--LGIERAHVGSLVCGHSHTMVVDANAQMAFSWGSNATGELG 271



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 55/154 (35%), Positives = 78/154 (50%), Gaps = 17/154 (11%)

Query: 332 CGQGSTDDELSPNCVSS-------LLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQL 384
           CG           CVS        L G++I  +A G  H +  + +GDV++FG N +GQL
Sbjct: 51  CGNLDHKSSRFSTCVSHELRELLPLRGVRINSLACGRAHAVLTTEEGDVWSFGWNMYGQL 110

Query: 385 GTGGDQAET-LPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDV 443
           G G     T  P+LL+  SL     + V+CG +H  V+  DG +F WG N+ GQL +G +
Sbjct: 111 GLGLQYDHTRTPQLLE--SLRGPKLQDVACGGQHAVVMLSDGSLFAWGRNEEGQLAIGSL 168

Query: 444 IDRNIPSQVTI-----EGCVPRNVACGWWHTLLL 472
             + IPS+V       E  V   +ACG+ HT  L
Sbjct: 169 EPKLIPSRVETPWRGEERVV--QLACGFSHTAFL 200



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 35/216 (16%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPC- 270
           P L+    G ++  VA GG+H + +   G ++ WG   EGQL +GS       P  IP  
Sbjct: 122 PQLLESLRGPKLQDVACGGQHAVVMLSDGSLFAWGRNEEGQLAIGSL-----EPKLIPSR 176

Query: 271 IESSY-GKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
           +E+ + G++R                      V  +ACG  H+A +T +G +   G G  
Sbjct: 177 VETPWRGEER----------------------VVQLACGFSHTAFLTSSGRVFCSGQGDS 214

Query: 330 GQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDV-YAFGGNQFGQLGTGG 388
           GQ G GS  + L P  V  +    +  +  G  HT+ + ++  + +++G N  G+LG   
Sbjct: 215 GQLGIGSKSNSLVPALVLGIERAHVGSLVCGHSHTMVVDANAQMAFSWGSNATGELGHAS 274

Query: 389 DQAE--TLPRLLDAPSLENVHSKSVSCG--ARHTAV 420
            + E   LP+L+    L+ V   +V CG  ARHT +
Sbjct: 275 CEVEFQLLPKLM-LEDLKEVRLSAVGCGPCARHTLL 309



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 79/288 (27%), Positives = 112/288 (38%), Gaps = 70/288 (24%)

Query: 68  TW--GSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWK 125
           TW  G+ D     + T   H E+ E  PL     I   A G AH V  TE G+V+++GW 
Sbjct: 48  TWICGNLDHKSSRFSTCVSH-ELRELLPLRG-VRINSLACGRAHAVLTTEEGDVWSFGWN 105

Query: 126 ECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSG---TDGR--- 179
                  ++G L  G GL  D   R    L     P+ Q   + GG  +    +DG    
Sbjct: 106 -------MYGQL--GLGLQYD-HTRTPQLLESLRGPKLQ-DVACGGQHAVVMLSDGSLFA 154

Query: 180 -GSGEEGSK---RRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLA 235
            G  EEG          L     E+   G+E               R+  +A G  HT  
Sbjct: 155 WGRNEEGQLAIGSLEPKLIPSRVETPWRGEE---------------RVVQLACGFSHTAF 199

Query: 236 LSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF 295
           L+  G+V+  G G  GQLG+GS+     S   +P +    G +R+               
Sbjct: 200 LTSSGRVFCSGQGDSGQLGIGSK-----SNSLVPAL--VLGIERA--------------- 237

Query: 296 RVPGNYVKGIACGGRHSAVITDAGALLTFGWG--LYGQCGQGSTDDEL 341
                +V  + CG  H+ V+ DA A + F WG    G+ G  S + E 
Sbjct: 238 -----HVGSLVCGHSHTMVV-DANAQMAFSWGSNATGELGHASCEVEF 279


>gi|403303292|ref|XP_003942270.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Saimiri boliviensis boliviensis]
          Length = 551

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/176 (36%), Positives = 102/176 (57%), Gaps = 7/176 (3%)

Query: 303 KGIAC----GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS-LLGIQIEGV 357
           K IAC     G H  + T  G + T+G   Y Q G G+T+  L P  +S+ L   Q+  V
Sbjct: 98  KKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV 157

Query: 358 AAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARH 417
           A G +H++ ++SDG+V+A+G N  GQ+G+G    + +PR +    L+N    +++CG   
Sbjct: 158 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTINQPIPRRVTG-CLQNKVVVTIACGQMC 216

Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
              + D G+V+ WG+N  GQLGLG+  ++  P +V  ++G   + VACG+ HTL+L
Sbjct: 217 CMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 272



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 117/238 (49%), Gaps = 30/238 (12%)

Query: 220 GVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
           G +IA ++ G G H +  +  G+V+ WG+    QLG G+     ++   +PC  S+    
Sbjct: 97  GKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT-----TNHGLVPCHIST---- 147

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
                             +    V  +ACG  HS V+T  G +  +G+   GQ G GST 
Sbjct: 148 -----------------NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTI 190

Query: 339 DELSPNCVSSLLGIQIE-GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
           ++  P  V+  L  ++   +A G    + +   G+VY +G N  GQLG G    +  P  
Sbjct: 191 NQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTP-- 248

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
               +L+ +  + V+CG  HT V+ D+G+V+ WG N YGQLG G+  +++ P+ VT+E
Sbjct: 249 CRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE 306



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 70/231 (30%), Positives = 110/231 (47%), Gaps = 30/231 (12%)

Query: 203 SGDENLSAFPCLVTLN-PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +G  N    PC ++ N    ++  VA G  H+L L+  G+V+ WGY   GQ+G GS I  
Sbjct: 133 NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTIN- 191

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
                PIP         R     +  V             V  IACG      + D+G +
Sbjct: 192 ----QPIP--------RRVTGCLQNKV-------------VVTIACGQMCCMAVVDSGEV 226

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             +G+   GQ G G++ ++ +P  V++L GI+++ VA G  HT+ ++ +G VYA+G N +
Sbjct: 227 YVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSY 286

Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           GQLGTG    ++ P  +       +  +  +C + HT A     G V+ WG
Sbjct: 287 GQLGTGNKSNQSYPTPVTVEKDRII--EIAACHSTHTSAAKTQGGHVYMWG 335



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 15/111 (13%)

Query: 370 DGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFC 429
           + +++  G N  G LG G  Q+   PR LD+ S + +   S   G  H  +   +G+VF 
Sbjct: 64  NDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGP-HIVLATTEGEVFT 122

Query: 430 WGWNKYGQLGLGDV--------IDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           WG N Y QLG G          I  N+ ++  IE      VACG +H+L+L
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIE------VACGSYHSLVL 167



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 55/133 (41%), Gaps = 17/133 (12%)

Query: 14  VFMWGYL-PGALPQRSPILSPLVVRLP--LTVGSAWRDVCGGGCGFAMAISDSRKLITWG 70
           VF WGY   G +   S I  P+  R+   L         CG  C   MA+ DS ++  WG
Sbjct: 173 VFAWGYNNSGQVGSGSTINQPIPRRVTGCLQNKVVVTIACGQMC--CMAVVDSGEVYVWG 230

Query: 71  STDDLGQSYVTSGKHGEIPEPFPLPTEASI--VKAAAGWAHCVAVTEGGEVYTWGWKECV 128
                G   +  G  G  P P  +     I   + A G+AH + +T+ G+VY WG     
Sbjct: 231 YN---GNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG----- 282

Query: 129 PSGRVFGDLSTGT 141
                +G L TG 
Sbjct: 283 --ANSYGQLGTGN 293


>gi|27503689|gb|AAH42574.1| Hect domain and RLD 3 [Mus musculus]
          Length = 1050

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 113/254 (44%), Gaps = 30/254 (11%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
            I  VA G  H+LALSD GQ++ WG G +GQLGL +    V+ P  I             
Sbjct: 85  HIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ------------ 132

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDE 340
                         ++    +  ++CG  H   +   G   T+G   +GQ G G     +
Sbjct: 133 --------------KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
            SP  V SL GI +  VAAG  H+  +S  G V+ +G N  GQLG   ++    P  +  
Sbjct: 179 TSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKL 238

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVP 459
              + V    +SCG  HTAV+   G VF +G    GQLG   V D   P +V  + G   
Sbjct: 239 LRTQKV--VYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEV 296

Query: 460 RNVACGWWHTLLLA 473
             +ACG  HTL L 
Sbjct: 297 TQIACGRQHTLALV 310



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 140/308 (45%), Gaps = 51/308 (16%)

Query: 84  KHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGL 143
           + G  PE      +  I+  A G +H +A+++ G++++WG      +G   G L   T  
Sbjct: 70  REGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG------AGSD-GQLGLMTTE 122

Query: 144 DKDVFERQSSFLTEQVSPRSQVSRSSGG---TSSGTDGRGSGEEGSKRRRISLAKQTAES 200
           D     R    L ++++ ++ +  S G     +   DG+      +   ++ L K+    
Sbjct: 123 DSVAVPR----LIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 201 SSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR 260
           +S         P  V    G+ +A VAAGG H+ ALS  G V+GWG    GQLGL     
Sbjct: 179 TS---------PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE-- 227

Query: 261 MVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA 320
                           KDR +      + ++          V  I+CG  H+AV+T +G 
Sbjct: 228 ----------------KDRESPCHVKLLRTQK---------VVYISCGEEHTAVLTKSGG 262

Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFGGN 379
           + TFG G  GQ G  S +DE++P  V  L+G ++  +A G  HT+  + S G +YAFG  
Sbjct: 263 VFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCG 322

Query: 380 QFGQLGTG 387
             GQLGTG
Sbjct: 323 AKGQLGTG 330



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 82/276 (29%), Positives = 126/276 (45%), Gaps = 38/276 (13%)

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           SS  + + A P +        I  VA GG H++ L + G+V+  G   +GQLG     R 
Sbjct: 15  SSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLG---HERE 71

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
            + P  I  +                             ++  +ACG  HS  ++D G L
Sbjct: 72  GNKPEQIGALAD--------------------------QHIIHVACGESHSLALSDRGQL 105

Query: 322 LTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
            ++G G  GQ G  +T+D ++ P  +  L    I  V+ G WH + +++DG  + +G N 
Sbjct: 106 FSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNS 165

Query: 381 FGQLGTGGD-QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG 439
            GQLG G +  ++T P+     SLE +    V+ G  H+  ++  G VF WG N  GQLG
Sbjct: 166 HGQLGLGKEFPSQTSPQ--RVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223

Query: 440 LGDVIDRNIPSQVTI---EGCVPRNVACGWWHTLLL 472
           L D  DR  P  V +   +  V   ++CG  HT +L
Sbjct: 224 LSDEKDRESPCHVKLLRTQKVV--YISCGEEHTAVL 257



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 94/372 (25%), Positives = 143/372 (38%), Gaps = 85/372 (22%)

Query: 39  PLTVGS-AWRDVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLP 95
           P  +G+ A + +    CG   ++A+SD  +L +WG+  D     +T+     +P      
Sbjct: 75  PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 96  TEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFL 155
            + +I++ + G  HC+A+   G+ +TWG           G L    GL K+         
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWG-------KNSHGQL----GLGKE--------F 175

Query: 156 TEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLA-------KQTAESSSSGDENL 208
             Q SP  Q  RS  G        G    G+    +SL+          A      DE  
Sbjct: 176 PSQTSP--QRVRSLEGIPLAQVAAG----GAHSFALSLSGAVFGWGMNNAGQLGLSDEKD 229

Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
              PC V L    ++  ++ G  HT  L+  G V+ +G G  GQLG              
Sbjct: 230 RESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG-------------- 275

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFRV---PGNYVKGIACGGRHS-AVITDAGALLTF 324
                             SVN E    RV    G+ V  IACG +H+ A++  +G +  F
Sbjct: 276 ----------------HDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAF 319

Query: 325 GWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFG 382
           G G  GQ G G T +   P+ V             G W  H+  +S+  D + +      
Sbjct: 320 GCGAKGQLGTGHTCNVKCPSPVK------------GHWAAHSSQLSARADRFKY--RVVK 365

Query: 383 QLGTGGDQAETL 394
           Q+ +GGDQ   L
Sbjct: 366 QIFSGGDQTFVL 377



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/124 (35%), Positives = 62/124 (50%), Gaps = 10/124 (8%)

Query: 354 IEGVAAGLWHTICISSDGDVYAFGGNQFGQLG--TGGDQAETLPRLLDAPSLENVHSKSV 411
           I+ VA G  H++ +  DG+VY  G N  GQLG    G++ E +  L D       H   V
Sbjct: 36  IKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKPEQIGALADQ------HIIHV 89

Query: 412 SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR-NIPSQV-TIEGCVPRNVACGWWHT 469
           +CG  H+  ++D G++F WG    GQLGL    D   +P  +  +       V+CG WH 
Sbjct: 90  ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149

Query: 470 LLLA 473
           L LA
Sbjct: 150 LALA 153


>gi|408500692|ref|YP_006864611.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
 gi|408465516|gb|AFU71045.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
          Length = 1279

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 112/433 (25%), Positives = 171/433 (39%), Gaps = 65/433 (15%)

Query: 35   VVRLPLTVGSAWR-DVCGGGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEP 91
            V   P T+    R D    G  F++ ++       WG+     L Q         + P  
Sbjct: 781  VTITPPTINRGIRFDQVSAGGSFSIGVASDGNAYAWGNNKYGQLAQKPADVSMQ-KTPVR 839

Query: 92   FPLPTEA----SIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDV 147
             PLP  A    +  + AAG +H +A+   G VY+WG  +        G L  GT  D+  
Sbjct: 840  IPLPDGADSSFTYTQVAAGDSHVLAIGSNGIVYSWGRND-------HGQLGDGTTTDR-- 890

Query: 148  FERQSSFLTEQVSPRSQVSRSSG-GTSSGTDGRGS----GEEGSKRRRISLAKQTAESSS 202
            +  Q    T    P   V  S+G   S+  D        G E + + +      T ++ +
Sbjct: 891  YNPQPVKDTGG-QPFKAVQVSAGVADSAAIDSENRVYTWGSESTGKGQTPAYSTTRKNPT 949

Query: 203  SGDENLSAFPCLVTLNPG--VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR 260
                     P     NPG  +    V+      +AL   G V+ WGY   GQLG G+   
Sbjct: 950  ---------PAADPDNPGQTLHAVQVSLNWSFVMALDADGNVYTWGYNTNGQLGNGTSDS 1000

Query: 261  MVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA 320
               + +P      S+   +                         I+ G  H+  I   G 
Sbjct: 1001 TSYASNPARLPSQSFQASQ-------------------------ISAGSWHALAIDTDGN 1035

Query: 321  LLTFGWGLYGQCGQGSTDDELSP----NCVSSLLGIQIEGVAAGLWHTICISSDGDVYAF 376
              T+G+  YGQ G GST D+  P    N   +   ++   ++AG+ H++ +  DG ++A+
Sbjct: 1036 TWTWGYNGYGQLGDGSTSDKYKPQTVQNPTDTSQSLKATQISAGVDHSLVVDRDGSLWAW 1095

Query: 377  GGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSV--SCGARHTAVIADDGKVFCWGWNK 434
            G N  GQLG G    +T P  +  P+ +    K+V  S G  H+  I  DG ++ WG N+
Sbjct: 1096 GWNSNGQLGIGNTVNQTKPATIKDPANKAQTFKAVRSSAGQLHSLAIRQDGNLWAWGDNQ 1155

Query: 435  YGQLGLGDVIDRN 447
            YGQLG      RN
Sbjct: 1156 YGQLGNNQTATRN 1168



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 74/263 (28%), Positives = 121/263 (46%), Gaps = 36/263 (13%)

Query: 226  VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI-RMVSSP------HPIPCIESSYGKD 278
            VAAG  H LA+   G V+ WG    GQLG G+   R    P       P   ++ S G  
Sbjct: 855  VAAGDSHVLAIGSNGIVYSWGRNDHGQLGDGTTTDRYNPQPVKDTGGQPFKAVQVSAGVA 914

Query: 279  RSAAL----------SRGSVNSEGPGFRV-------------PGNYVKGIACGGRHSAVI 315
             SAA+          S  +   + P +               PG  +  +      S V+
Sbjct: 915  DSAAIDSENRVYTWGSESTGKGQTPAYSTTRKNPTPAADPDNPGQTLHAVQVSLNWSFVM 974

Query: 316  T-DA-GALLTFGWGLYGQCGQGSTDDELSPNCVSSL--LGIQIEGVAAGLWHTICISSDG 371
              DA G + T+G+   GQ G G++D     +  + L     Q   ++AG WH + I +DG
Sbjct: 975  ALDADGNVYTWGYNTNGQLGNGTSDSTSYASNPARLPSQSFQASQISAGSWHALAIDTDG 1034

Query: 372  DVYAFGGNQFGQLGTGGDQAETLPRLLDAPS--LENVHSKSVSCGARHTAVIADDGKVFC 429
            + + +G N +GQLG G    +  P+ +  P+   +++ +  +S G  H+ V+  DG ++ 
Sbjct: 1035 NTWTWGYNGYGQLGDGSTSDKYKPQTVQNPTDTSQSLKATQISAGVDHSLVVDRDGSLWA 1094

Query: 430  WGWNKYGQLGLGDVIDRNIPSQV 452
            WGWN  GQLG+G+ +++  P+ +
Sbjct: 1095 WGWNSNGQLGIGNTVNQTKPATI 1117



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 86/181 (47%), Gaps = 15/181 (8%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE----GVAAG 360
           ++ G  H   +   G L ++G   +GQ G G+T +   P  V    G+  +      +AG
Sbjct: 239 VSAGRGHILAVASDGNLYSWGSNDHGQLGDGTTAERHEPVPVKKPQGVSQDFTWVQASAG 298

Query: 361 LWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHS----KSVSCGAR 416
              ++ + SDG +Y++G N +GQLG     A   P  ++ P  +N  S    K  + G+ 
Sbjct: 299 YLFSVGLGSDGKLYSWGDNTYGQLGNNTTTAHYTPEPVNLP--QNAPSGFTWKQEAVGSL 356

Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVA----CGW-WHTLL 471
           H   +  DG ++ WG N + QLG G   +R+ P QV +   VP   A     GW WH+L 
Sbjct: 357 HALGLGSDGNLYSWGDNDHNQLGDGTTTERHAPIQVKMPSGVPSGFAWKQMSGWGWHSLA 416

Query: 472 L 472
           L
Sbjct: 417 L 417



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 68/269 (25%), Positives = 112/269 (41%), Gaps = 37/269 (13%)

Query: 216  TLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLG-SRIRMVSSPHPIPCIESS 274
            T+N G+R   V+AGG  ++ ++  G  + WG    GQL    + + M  +P  IP  +  
Sbjct: 787  TINRGIRFDQVSAGGSFSIGVASDGNAYAWGNNKYGQLAQKPADVSMQKTPVRIPLPD-- 844

Query: 275  YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
             G D S   ++                   +A G  H   I   G + ++G   +GQ G 
Sbjct: 845  -GADSSFTYTQ-------------------VAAGDSHVLAIGSNGIVYSWGRNDHGQLGD 884

Query: 335  GSTDDELSPNCVSSLLGIQIEG--VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAE 392
            G+T D  +P  V    G   +   V+AG+  +  I S+  VY +G    G+   G   A 
Sbjct: 885  GTTTDRYNPQPVKDTGGQPFKAVQVSAGVADSAAIDSENRVYTWGSESTGK---GQTPAY 941

Query: 393  TLPRLLDAPSL------ENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR 446
            +  R    P+       + +H+  VS        +  DG V+ WG+N  GQLG G     
Sbjct: 942  STTRKNPTPAADPDNPGQTLHAVQVSLNWSFVMALDADGNVYTWGYNTNGQLGNGTSDST 1001

Query: 447  NI---PSQVTIEGCVPRNVACGWWHTLLL 472
            +    P+++  +      ++ G WH L +
Sbjct: 1002 SYASNPARLPSQSFQASQISAGSWHALAI 1030



 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 108/262 (41%), Gaps = 34/262 (12%)

Query: 215 VTLNP----GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPC 270
           VTL P    G+R + V+AG  H LA++  G ++ WG    GQLG G+         P+P 
Sbjct: 224 VTLTPPGPRGIRFSQVSAGRGHILAVASDGNLYSWGSNDHGQLGDGTTAERH---EPVPV 280

Query: 271 IESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
            +               V+ +    +    Y+  +  G          G L ++G   YG
Sbjct: 281 KKPQ------------GVSQDFTWVQASAGYLFSVGLGSD--------GKLYSWGDNTYG 320

Query: 331 QCGQGSTDDELSPNCV----SSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
           Q G  +T    +P  V    ++  G   +  A G  H + + SDG++Y++G N   QLG 
Sbjct: 321 QLGNNTTTAHYTPEPVNLPQNAPSGFTWKQEAVGSLHALGLGSDGNLYSWGDNDHNQLGD 380

Query: 387 GGDQAETLPRLLDAPS--LENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVI 444
           G       P  +  PS        K +S    H+  +  D  ++ WG N  G++G G + 
Sbjct: 381 GTTTERHAPIQVKMPSGVPSGFAWKQMSGWGWHSLALGSDNWIYGWGANTRGEVGTGSIT 440

Query: 445 DRNI-PSQVTIEGCVPRNVACG 465
           D  I P ++     VP N   G
Sbjct: 441 DNKITPVRIATPQGVPSNFTWG 462



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 107/428 (25%), Positives = 164/428 (38%), Gaps = 67/428 (15%)

Query: 53  GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIP--EPFPLPTEASIVKAAAGWA 108
           G G  +A++    L +WGS D   LG    T+ +H  +P  +P  +  + + V+A+AG+ 
Sbjct: 242 GRGHILAVASDGNLYSWGSNDHGQLGDG-TTAERHEPVPVKKPQGVSQDFTWVQASAGYL 300

Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRS 168
             V +   G++Y+WG          +G L   T       E           P +    +
Sbjct: 301 FSVGLGSDGKLYSWG-------DNTYGQLGNNTTTAHYTPE-----------PVNLPQNA 342

Query: 169 SGGTSSGTDGRGSGEE---GSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRI-- 223
             G +   +  GS      GS     S           G       P  V +  GV    
Sbjct: 343 PSGFTWKQEAVGSLHALGLGSDGNLYSWGDNDHNQLGDGTTTERHAPIQVKMPSGVPSGF 402

Query: 224 --ATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
               ++  G H+LAL     ++GWG    G++G GS      +P  I             
Sbjct: 403 AWKQMSGWGWHSLALGSDNWIYGWGANTRGEVGTGSITDNKITPVRI------------- 449

Query: 282 ALSRGSVNSEGPGFRVPGNYVKG-IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
           A  +G          VP N+  G    G  +S  I   G + T+G+G  G  G GST D 
Sbjct: 450 ATPQG----------VPSNFTWGQFQMGDYYSQAIGSDGNIYTWGYGGNGNVGNGSTVDV 499

Query: 341 LSPNCVSSLLGI-------QIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAET 393
             P       G+       Q+  ++     ++ I SDG++Y++G N  GQLG        
Sbjct: 500 YGPTQAHKPNGVLPNFSWKQVSLLSVA---SLAIGSDGNLYSWGANNNGQLGDNTTTQRN 556

Query: 394 LPRLLDAPSLENVHSKSVSCGA---RHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
            P  + AP         V   A    ++  +A DG ++ WG N  GQLG     DR+IP 
Sbjct: 557 TPIRVAAPQNAPTGLTWVQASAGWDNNSFGLASDGNLYSWGKNANGQLGDNTTNDRHIPG 616

Query: 451 QVTIEGCV 458
           +V + G  
Sbjct: 617 RVNMPGTT 624



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 6/118 (5%)

Query: 351 GIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPS--LENVHS 408
           GI+   V+AG  H + ++SDG++Y++G N  GQLG G       P  +  P    ++   
Sbjct: 233 GIRFSQVSAGRGHILAVASDGNLYSWGSNDHGQLGDGTTAERHEPVPVKKPQGVSQDFTW 292

Query: 409 KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGW 466
              S G   +  +  DGK++ WG N YGQLG         P  V +    P+N   G+
Sbjct: 293 VQASAGYLFSVGLGSDGKLYSWGDNTYGQLGNNTTTAHYTPEPVNL----PQNAPSGF 346


>gi|328876892|gb|EGG25255.1| inositol 5-phosphatase [Dictyostelium fasciculatum]
          Length = 1338

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 81/280 (28%), Positives = 127/280 (45%), Gaps = 53/280 (18%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G R+ +V+ G  HT+  +D   VW  GY  EGQLG+G  I   + P  +           
Sbjct: 76  GKRVNSVSCGLNHTILSTDDDGVWSMGYNNEGQLGVGQDISESAVPLRV----------- 124

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDD 339
                            +P + ++ I  G    A IT  G L  +G   YGQ   G   D
Sbjct: 125 ----------------LLPPD-IRQIVAGPMTGAAITSDGELYMWGSAKYGQLANGKASD 167

Query: 340 ---ELSPNCVSSLLG--------------IQIEGVAAGLWHTICISSDGDVYAFGGNQFG 382
              ++ P      L               ++   V  G  HTI ++  G VY++G N+FG
Sbjct: 168 RANQMVPQPAQLPLDDLNVSSSSVGSGGRVRWRKVTFGEKHTIGLTRRGTVYSWGINEFG 227

Query: 383 QLGTGGDQAETLPRLLDAPSL----ENVHSK--SVSCGARHTAVIADDGKVFCWGWNKYG 436
           QLG G    + +P L+D  S+     N + K   +S G  H++ ++++G ++CWG N+YG
Sbjct: 228 QLGLGHRNNKVIPVLVDLKSMAGGENNAYFKIVDISSGGYHSSALSEEGILYCWGSNQYG 287

Query: 437 QLGLGDVIDRNIPS--QVTIEGCVPRNVACGWWHTLLLAV 474
           Q+G GD+ D+  P   +V +E    + VA G  HT+L+ +
Sbjct: 288 QIGNGDLEDQVSPVKIKVDVEDKKVKKVAMGSNHTVLVTI 327



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 87/180 (48%), Gaps = 26/180 (14%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI---ESSYGKDRSAA 282
           V  G +HT+ L+  G V+ WG    GQLGLG R   V     IP +   +S  G + +A 
Sbjct: 202 VTFGEKHTIGLTRRGTVYSWGINEFGQLGLGHRNNKV-----IPVLVDLKSMAGGENNAY 256

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                              +  I+ GG HS+ +++ G L  +G   YGQ G G  +D++S
Sbjct: 257 FK-----------------IVDISSGGYHSSALSEEGILYCWGSNQYGQIGNGDLEDQVS 299

Query: 343 PNCVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           P  +   +   +++ VA G  HT+ ++  G+VY FG + + QLG G ++    P L+  P
Sbjct: 300 PVKIKVDVEDKKVKKVAMGSNHTVLVTITGEVYTFGNSDYYQLGHGNNKNRMWPSLIVKP 359



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 73/330 (22%), Positives = 110/330 (33%), Gaps = 110/330 (33%)

Query: 33  PLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPE 90
           PL V LP  +    R +  G    A AI+   +L  WGS     L     +   +  +P+
Sbjct: 121 PLRVLLPPDI----RQIVAGPMTGA-AITSDGELYMWGSAKYGQLANGKASDRANQMVPQ 175

Query: 91  PFPLPTE--------------ASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGD 136
           P  LP +                  K   G  H + +T  G VY+WG  E       FG 
Sbjct: 176 PAQLPLDDLNVSSSSVGSGGRVRWRKVTFGEKHTIGLTRRGTVYSWGINE-------FGQ 228

Query: 137 LSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQ 196
           L  G         R +  +   V  +S                                 
Sbjct: 229 LGLG--------HRNNKVIPVLVDLKSM-------------------------------- 248

Query: 197 TAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLG 256
                 +G EN + F          +I  +++GG H+ ALS+ G ++ WG    GQ+G G
Sbjct: 249 ------AGGENNAYF----------KIVDISSGGYHSSALSEEGILYCWGSNQYGQIGNG 292

Query: 257 SRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVIT 316
                VS   P+                            V    VK +A G  H+ ++T
Sbjct: 293 DLEDQVS---PVKI-----------------------KVDVEDKKVKKVAMGSNHTVLVT 326

Query: 317 DAGALLTFGWGLYGQCGQGSTDDELSPNCV 346
             G + TFG   Y Q G G+  + + P+ +
Sbjct: 327 ITGEVYTFGNSDYYQLGHGNNKNRMWPSLI 356


>gi|410900470|ref|XP_003963719.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Takifugu rubripes]
          Length = 1042

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/260 (31%), Positives = 124/260 (47%), Gaps = 34/260 (13%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI------ESSYG 276
           I  V+ G  HTLAL+D GQ++ WG G +GQLGL +    V  P  I C+      + + G
Sbjct: 86  IVAVSGGESHTLALNDKGQIFSWGLGSDGQLGLNNFEECVRVPRNIKCLSDVQIAQVACG 145

Query: 277 KDRSAALSRG---------------------SVNSEGPGFRVPGNYVKGIACGGRHSAVI 315
              S ALS+G                     S+++      + G     ++ GG HS  I
Sbjct: 146 YRHSHALSKGGQVFSWGQNQFGQLGLGMHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAI 205

Query: 316 TDAGALLTFGWGL--YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDV 373
           T +GA+  FGWG   +GQ G   T+D   P  + SL   ++  V+ G  HT  ++ +G V
Sbjct: 206 TLSGAV--FGWGRNKFGQLGLNDTNDRWFPALLKSLRSQRVIYVSCGEDHTAALTKEGGV 263

Query: 374 YAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGW 432
           + FG   +GQLG      E  PR +    + N+ ++ +SCG +HT A     GK++ +G 
Sbjct: 264 FTFGAGGYGQLGHNSTNHEINPRKV-FELMGNIVTQ-ISCGRQHTLAFTPSSGKMYSFGL 321

Query: 433 NKYGQLGLGDVIDRNIPSQV 452
              GQLG     +R  P+ V
Sbjct: 322 GGNGQLGTRSTCNRKSPAPV 341



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 89/295 (30%), Positives = 131/295 (44%), Gaps = 34/295 (11%)

Query: 205 DENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSS 264
           DE +   P       G ++  V  G +HT+ L D G V+  G    GQLG     +    
Sbjct: 18  DEEIVIEPRKCEFFHGKKVCDVGCGLKHTVFLLDDGTVYTCGCNDLGQLG---HEKPRKK 74

Query: 265 PHPIPCIESSY------GKDRSAALS-RGSVNSEGPG-------------FRVPGNY--- 301
           P  +  +++        G+  + AL+ +G + S G G              RVP N    
Sbjct: 75  PEHVVALDAQIIVAVSGGESHTLALNDKGQIFSWGLGSDGQLGLNNFEECVRVPRNIKCL 134

Query: 302 ----VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEG 356
               +  +ACG RHS  ++  G + ++G   +GQ G G     +S P  + SL GI    
Sbjct: 135 SDVQIAQVACGYRHSHALSKGGQVFSWGQNQFGQLGLGMHGSSISTPQIIQSLQGIPFAQ 194

Query: 357 VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR 416
           ++AG  H+  I+  G V+ +G N+FGQLG         P LL   SL +     VSCG  
Sbjct: 195 LSAGGAHSFAITLSGAVFGWGRNKFGQLGLNDTNDRWFPALLK--SLRSQRVIYVSCGED 252

Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTL 470
           HTA +  +G VF +G   YGQLG         P +V  + G +   ++CG  HTL
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTNHEINPRKVFELMGNIVTQISCGRQHTL 307



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 101/388 (26%), Positives = 162/388 (41%), Gaps = 75/388 (19%)

Query: 47  RDVCGGGCGF--AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           + VC  GCG    + + D   + T G  +DLGQ  +   K  + PE         IV  +
Sbjct: 34  KKVCDVGCGLKHTVFLLDDGTVYTCGC-NDLGQ--LGHEKPRKKPEHVVALDAQIIVAVS 90

Query: 105 AGWAHCVAVTEGGEVYTWG-----------WKECVPSGRVFGDLSTGTGLDKDVFERQSS 153
            G +H +A+ + G++++WG           ++ECV   R    LS       DV      
Sbjct: 91  GGESHTLALNDKGQIFSWGLGSDGQLGLNNFEECVRVPRNIKCLS-------DV------ 137

Query: 154 FLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPC 213
               Q++  +   R S   S G      G+  ++  ++ L    +  S+         P 
Sbjct: 138 ----QIAQVACGYRHSHALSKGGQVFSWGQ--NQFGQLGLGMHGSSIST---------PQ 182

Query: 214 LVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES 273
           ++    G+  A ++AGG H+ A++  G V+GWG    GQLGL       ++    P +  
Sbjct: 183 IIQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGRNKFGQLGLND-----TNDRWFPALLK 237

Query: 274 SYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCG 333
           S    R                      V  ++CG  H+A +T  G + TFG G YGQ G
Sbjct: 238 SLRSQR----------------------VIYVSCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 334 QGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICIS-SDGDVYAFGGNQFGQLGTGGDQAE 392
             ST+ E++P  V  L+G  +  ++ G  HT+  + S G +Y+FG    GQLGT      
Sbjct: 276 HNSTNHEINPRKVFELMGNIVTQISCGRQHTLAFTPSSGKMYSFGLGGNGQLGTRSTCNR 335

Query: 393 TLPRLLDAPSLEN---VHSKSVSCGARH 417
             P  +  P + +   + S+S  C   H
Sbjct: 336 KSPAPVKGPFVASAAPIESESEQCFCIH 363



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/162 (33%), Positives = 77/162 (47%), Gaps = 18/162 (11%)

Query: 321 LLTFGWGLYGQCGQGSTDDEL--SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G   YGQ G G  D+E+   P       G ++  V  GL HT+ +  DG VY  G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVIEPRKCEFFHGKKVCDVGCGLKHTVFLLDDGTVYTCGC 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQL  G ++    P  + A   + +   +VS G  HT  + D G++F WG    GQL
Sbjct: 61  NDLGQL--GHEKPRKKPEHVVALDAQII--VAVSGGESHTLALNDKGQIFSWGLGSDGQL 116

Query: 439 GLGDV-----IDRNIP--SQVTIEGCVPRNVACGWWHTLLLA 473
           GL +      + RNI   S V I       VACG+ H+  L+
Sbjct: 117 GLNNFEECVRVPRNIKCLSDVQIA-----QVACGYRHSHALS 153


>gi|295789057|ref|NP_001171422.1| X-linked retinitis pigmentosa GTPase regulator isoform 2 [Mus
           musculus]
 gi|26325790|dbj|BAC26649.1| unnamed protein product [Mus musculus]
          Length = 972

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 95/171 (55%), Gaps = 4/171 (2%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           ++CG  H+A++T    L  FG   +GQ G GS    + P C+ +L   +++  A G  HT
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 137

Query: 365 ICISSDGDVYAFGGNQFGQLGTGG-DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
           +  +  G VYA GGN  GQLG G  D  +T  +++     + +  K +S GA  +A + +
Sbjct: 138 LVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTI--KQLSAGANTSAALTE 195

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAV 474
           DGK+F WG N  GQ+GL D  +  IP +VT+ G     ++CG++H+  + +
Sbjct: 196 DGKLFMWGDNSEGQIGLEDKSNVCIPHEVTV-GKPISWISCGYYHSAFVTM 245



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 139/298 (46%), Gaps = 45/298 (15%)

Query: 213 CLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR-----IRMVSSPHP 267
           C+  L P  ++   A G  HTL  +D G V+  G   EGQLGLG          +    P
Sbjct: 118 CIKALKPE-KVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTP 176

Query: 268 IPCIES-SYGKDRSAALSRGSV------NSEG------------PGFRVPGNYVKGIACG 308
              I+  S G + SAAL+          NSEG            P     G  +  I+CG
Sbjct: 177 ADTIKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISWISCG 236

Query: 309 GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVS--SLLGI--QIEGVAAGLWHT 364
             HSA +T  G L TFG    G+ G     +EL  N  S   +LGI  ++  VA G  HT
Sbjct: 237 YYHSAFVTMDGELYTFGEPENGKLG---LPNELLMNHRSPQRVLGIPERVIQVACGGGHT 293

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAET-LPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
           + ++ +  VYAFG  QFGQLG G    ET  P++++   +++     +SCG  HTA++ +
Sbjct: 294 VVLT-EKVVYAFGLGQFGQLGLGTFLFETSEPKIIE--RIKDQKICHISCGENHTALMTE 350

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC------VPRNVACGWWHTLLLAVP 475
            G ++ +G  ++G+LGLG     N  +Q     C        + +ACG  H L+ A P
Sbjct: 351 LGLLYTFGDGRHGKLGLG---MENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVFATP 405



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 111/258 (43%), Gaps = 48/258 (18%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
           ++ G  HT  ++   +++ +G    GQLGLGS+  ++       CI++            
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKP----TCIKA------------ 121

Query: 286 GSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNC 345
                      +    VK  ACG  H+ V TD G +   G    GQ G G TDD  + + 
Sbjct: 122 -----------LKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQ 170

Query: 346 VSSLL-GIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLE 404
           +        I+ ++AG   +  ++ DG ++ +G N  GQ+G        +P         
Sbjct: 171 IVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIP--------- 221

Query: 405 NVHSKSV-------SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC 457
             H  +V       SCG  H+A +  DG+++ +G  + G+LGL + +  N  S   + G 
Sbjct: 222 --HEVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGI 279

Query: 458 VPR--NVACGWWHTLLLA 473
             R   VACG  HT++L 
Sbjct: 280 PERVIQVACGGGHTVVLT 297



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 83/198 (41%), Gaps = 56/198 (28%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
           R+  VA GG HT+ L++   V+ +G G  GQLGLG+ +   S P  I             
Sbjct: 282 RVIQVACGGGHTVVLTE-KVVYAFGLGQFGQLGLGTFLFETSEPKIIE------------ 328

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD--D 339
                         R+    +  I+CG  H+A++T+ G L TFG G +G+ G G  +  +
Sbjct: 329 --------------RIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTN 374

Query: 340 ELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL-- 397
           +  P   S+ L   ++ +A G  H +  ++                         PRL  
Sbjct: 375 QFFPTLCSNFLRFAVQLIACGGCHMLVFAT-------------------------PRLGT 409

Query: 398 LDAPSLENVHSKSVSCGA 415
           +D P  E+V+   +S G+
Sbjct: 410 IDEPKFEDVYEPYISTGS 427


>gi|410910330|ref|XP_003968643.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Takifugu
           rubripes]
          Length = 527

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/222 (31%), Positives = 111/222 (50%), Gaps = 30/222 (13%)

Query: 212 PCLVTLNP-GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPC 270
           P LV+ N  G R+  VA G  HT+AL+  G+V+ WGY   GQ+G GS     ++  P P 
Sbjct: 118 PALVSTNLLGKRVIEVACGSHHTIALTTDGEVFAWGYNNSGQVGSGS-----TANQPTPR 172

Query: 271 IESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
             SS  +++                      V  IACG   S  + D+G +  +G+   G
Sbjct: 173 RVSSCLQNK---------------------VVVNIACGQLCSMAVLDSGEIYGWGYNCNG 211

Query: 331 QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
           Q G G+  ++ +P  +++L G+ +  VA G  HTI ++ +G VY++G N +GQLGTG   
Sbjct: 212 QLGLGNNGNQQTPCRIAALQGVNVIQVACGYAHTIALTDEGFVYSWGANSYGQLGTGNKC 271

Query: 391 AETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
            + +P L++    +   S+  +C   HT A     G+V  WG
Sbjct: 272 NQAVPTLINTE--KERMSEVAACHTSHTSAAKTQSGQVLMWG 311



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 81/269 (30%), Positives = 131/269 (48%), Gaps = 31/269 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMV 262
           GD   +  P  + +  G +I +++ G G H    +  G+V+ WG+ G  QLG G+     
Sbjct: 57  GDLQSTIEPRRIDVLCGKKIVSLSYGTGPHVAIATADGEVFSWGHNGYSQLGNGT----- 111

Query: 263 SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL 322
                     S++G      L+   V++   G RV       +ACG  H+  +T  G + 
Sbjct: 112 ----------STHG------LTPALVSTNLLGKRVIE-----VACGSHHTIALTTDGEVF 150

Query: 323 TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE-GVAAGLWHTICISSDGDVYAFGGNQF 381
            +G+   GQ G GST ++ +P  VSS L  ++   +A G   ++ +   G++Y +G N  
Sbjct: 151 AWGYNNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDSGEIYGWGYNCN 210

Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
           GQLG G +  +  P  + A  L+ V+   V+CG  HT  + D+G V+ WG N YGQLG G
Sbjct: 211 GQLGLGNNGNQQTPCRIAA--LQGVNVIQVACGYAHTIALTDEGFVYSWGANSYGQLGTG 268

Query: 442 DVIDRNIPSQVTIEGCVPRNV-ACGWWHT 469
           +  ++ +P+ +  E      V AC   HT
Sbjct: 269 NKCNQAVPTLINTEKERMSEVAACHTSHT 297



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 59/166 (35%), Positives = 99/166 (59%), Gaps = 3/166 (1%)

Query: 309 GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS-LLGIQIEGVAAGLWHTICI 367
           G H A+ T  G + ++G   Y Q G G++   L+P  VS+ LLG ++  VA G  HTI +
Sbjct: 84  GPHVAIATADGEVFSWGHNGYSQLGNGTSTHGLTPALVSTNLLGKRVIEVACGSHHTIAL 143

Query: 368 SSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKV 427
           ++DG+V+A+G N  GQ+G+G    +  PR + +  L+N    +++CG   +  + D G++
Sbjct: 144 TTDGEVFAWGYNNSGQVGSGSTANQPTPRRVSS-CLQNKVVVNIACGQLCSMAVLDSGEI 202

Query: 428 FCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
           + WG+N  GQLGLG+  ++  P ++  ++G     VACG+ HT+ L
Sbjct: 203 YGWGYNCNGQLGLGNNGNQQTPCRIAALQGVNVIQVACGYAHTIAL 248



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 53/108 (49%), Gaps = 3/108 (2%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           ++ + +V+A G N  G LG G  Q+   PR +D    + + S S   G  H A+   DG+
Sbjct: 37  VTVNDEVFALGTNCSGCLGLGDLQSTIEPRRIDVLCGKKIVSLSYGTGP-HVAIATADGE 95

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPR--NVACGWWHTLLL 472
           VF WG N Y QLG G       P+ V+      R   VACG  HT+ L
Sbjct: 96  VFSWGHNGYSQLGNGTSTHGLTPALVSTNLLGKRVIEVACGSHHTIAL 143



 Score = 40.4 bits (93), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 10/98 (10%)

Query: 50  CGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAH 109
           CG  C  +MA+ DS ++  WG   + GQ  + +  + + P         ++++ A G+AH
Sbjct: 188 CGQLC--SMAVLDSGEIYGWGYNCN-GQLGLGNNGNQQTPCRIAALQGVNVIQVACGYAH 244

Query: 110 CVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDV 147
            +A+T+ G VY+WG          +G L TG   ++ V
Sbjct: 245 TIALTDEGFVYSWG-------ANSYGQLGTGNKCNQAV 275


>gi|291401438|ref|XP_002717008.1| PREDICTED: hect domain and RLD 3 [Oryctolagus cuniculus]
          Length = 1504

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 138/308 (44%), Gaps = 51/308 (16%)

Query: 84  KHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGL 143
           + G  PE      +  IV  A G +H +A+++ G++++WG           G L   T  
Sbjct: 524 REGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWG-------AGSDGQLGLMTTE 576

Query: 144 DKDVFERQSSFLTEQVSPRSQVSRSSGG---TSSGTDGRGSGEEGSKRRRISLAKQTAES 200
           D     R    L ++++ ++ +  S G     +   DG+      +   ++ L K+    
Sbjct: 577 DSVAVPR----LIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 632

Query: 201 SSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR 260
           +S         P  V    G+ +A VAAGG H+ ALS  G V+GWG    GQLGL     
Sbjct: 633 TS---------PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE-- 681

Query: 261 MVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA 320
                           KDR +      + ++          V  I+CG  H+AV+T +G 
Sbjct: 682 ----------------KDRESPCHVKLLRTQK---------VVYISCGEEHTAVLTKSGG 716

Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFGGN 379
           + TFG G  GQ G  S +DE++P  V  L+G ++  +A G  HT+  + S G +YAFG  
Sbjct: 717 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 776

Query: 380 QFGQLGTG 387
             GQLGTG
Sbjct: 777 ARGQLGTG 784



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 112/251 (44%), Gaps = 30/251 (11%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
            I  VA G  H+LALSD GQ++ WG G +GQLGL +    V+ P  I             
Sbjct: 539 HIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ------------ 586

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDE 340
                         ++    +  ++CG  H   +   G   T+G   +GQ G G     +
Sbjct: 587 --------------KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 632

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
            SP  V SL GI +  VAAG  H+  +S  G V+ +G N  GQLG   ++    P  +  
Sbjct: 633 TSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKL 692

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVP 459
              + V    +SCG  HTAV+   G VF +G    GQLG   + D   P +V  + G   
Sbjct: 693 LRTQKV--VYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEV 750

Query: 460 RNVACGWWHTL 470
             +ACG  HTL
Sbjct: 751 TQIACGRQHTL 761



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 122/255 (47%), Gaps = 38/255 (14%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  VA GG H++ L + G+V+  G   +GQLG     R  + P  I             A
Sbjct: 490 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG---HEREGNKPEQI------------GA 534

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
           L+                ++  +ACG  HS  ++D G L ++G G  GQ G  +T+D ++
Sbjct: 535 LA--------------DQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA 580

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD-QAETLPRLLDA 400
            P  +  L    I  V+ G WH + +++DG  + +G N  GQLG G +  ++T P+ +  
Sbjct: 581 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVR- 639

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI---EGC 457
            SLE +    V+ G  H+  ++  G VF WG N  GQLGL D  DR  P  V +   +  
Sbjct: 640 -SLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKV 698

Query: 458 VPRNVACGWWHTLLL 472
           V   ++CG  HT +L
Sbjct: 699 V--YISCGEEHTAVL 711



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 85/195 (43%), Gaps = 18/195 (9%)

Query: 288 VNSEGPGFRVPGNYVKGIACGGRHSAVITDAG---ALLTFGWGLYGQCGQGSTDDEL--S 342
           + S  P  R P   V  I     + AV  D      +L +G+   GQ G  S    +   
Sbjct: 422 LTSHQPRQRAP---VSHIVTAAYYLAVFVDVSWIRTMLCWGYWSLGQPGISSNLQGIVAE 478

Query: 343 PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLG--TGGDQAETLPRLLDA 400
           P     +    ++ VA G  H++ +  DG+VY  G N  GQLG    G++ E +  L D 
Sbjct: 479 PQVCGFIADRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQIGALADQ 538

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR-NIPSQV-TIEGCV 458
                 H   V+CG  H+  ++D G++F WG    GQLGL    D   +P  +  +    
Sbjct: 539 ------HIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQT 592

Query: 459 PRNVACGWWHTLLLA 473
              V+CG WH L LA
Sbjct: 593 ILQVSCGNWHCLALA 607



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 99/399 (24%), Positives = 158/399 (39%), Gaps = 81/399 (20%)

Query: 39  PLTVGS-AWRDVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLP 95
           P  +G+ A + +    CG   ++A+SD  +L +WG+  D     +T+     +P      
Sbjct: 529 PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 588

Query: 96  TEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFL 155
            + +I++ + G  HC+A+   G+ +TWG           G L    GL K+         
Sbjct: 589 NQQTILQVSCGNWHCLALAADGQFFTWGKNS-------HGQL----GLGKE--------F 629

Query: 156 TEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLA-------KQTAESSSSGDENL 208
             Q SP  Q  RS  G        G    G+    +SL+          A      DE  
Sbjct: 630 PSQTSP--QRVRSLEGIPLAQVAAG----GAHSFALSLSGAVFGWGMNNAGQLGLSDEKD 683

Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
              PC V L    ++  ++ G  HT  L+  G V+ +G G  GQLG  S   M    +P 
Sbjct: 684 RESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDS---MNDEVNPR 740

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHS-AVITDAGALLTFGWG 327
             +E                        + G+ V  IACG +H+ A +  +G +  FG G
Sbjct: 741 RVLE------------------------LMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 776

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLG 385
             GQ G G T +   P+ V             G W  H+  +S+  D   +  +   Q+ 
Sbjct: 777 ARGQLGTGHTCNVKCPSPVK------------GYWAAHSGQLSARADRCKY--HIVKQIF 822

Query: 386 TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           +GGDQ   L    +  S   V  ++V+  A +T++I D+
Sbjct: 823 SGGDQTFVLCSKYENSS-PAVDFRTVN-QAHYTSLINDE 859


>gi|379719198|ref|YP_005311329.1| protein ChiA12 [Paenibacillus mucilaginosus 3016]
 gi|378567870|gb|AFC28180.1| ChiA12 [Paenibacillus mucilaginosus 3016]
          Length = 1205

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 82/263 (31%), Positives = 119/263 (45%), Gaps = 40/263 (15%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P  V +     +  +AAGG H LA+   G VW WG+ G GQLG GS     ++P  +  +
Sbjct: 77  PAPVQVQDLHSVEAIAAGGSHNLAIKSDGTVWAWGFNGYGQLGDGSTTGR-NTPVQVEGL 135

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
            S                            + G A    HS  +   G +  +G   YGQ
Sbjct: 136 RS----------------------------IVGAAAHYDHSLALKSDGTVWAWGRNEYGQ 167

Query: 332 CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
            G GS  D  +P  V  L    +  +++G  +++ + SDG V+A+G N++GQLG G    
Sbjct: 168 LGDGSKTDRHTPVRVKGL--DSVVAISSGFGYSLAVKSDGTVWAWGKNEYGQLGNGSTTQ 225

Query: 392 ETLPRLLDAPSLENVHS-KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
            + P       ++ +HS  +V+ G  H   I  DG V+ WG N  GQLG G  +DR  P 
Sbjct: 226 SSAPV-----QVQGLHSVTAVASGDYHNLAIKRDGTVWSWGPNLAGQLGDGSDMDRYTPV 280

Query: 451 QVTIEGCVPR-NVACGWWHTLLL 472
           QV  EG     +V  G+ H+L L
Sbjct: 281 QV--EGFSSAVDVDAGFGHSLAL 301



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/265 (30%), Positives = 117/265 (44%), Gaps = 52/265 (19%)

Query: 220 GVR-IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES----- 273
           G+R I   AA   H+LAL   G VW WG    GQLG GS+     +P  +  ++S     
Sbjct: 134 GLRSIVGAAAHYDHSLALKSDGTVWAWGRNEYGQLGDGSKTDR-HTPVRVKGLDSVVAIS 192

Query: 274 ----------------SYGKDRSAALSRGSVNSEGPGFRVPGNY-VKGIACGGRHSAVIT 316
                           ++GK+    L  GS        +V G + V  +A G  H+  I 
Sbjct: 193 SGFGYSLAVKSDGTVWAWGKNEYGQLGNGSTTQSSAPVQVQGLHSVTAVASGDYHNLAIK 252

Query: 317 DAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG------VAAGLWHTICISSD 370
             G + ++G  L GQ G GS  D  +P        +Q+EG      V AG  H++ + SD
Sbjct: 253 RDGTVWSWGPNLAGQLGDGSDMDRYTP--------VQVEGFSSAVDVDAGFGHSLALKSD 304

Query: 371 GDVYAFGGNQFGQLGTGGD---QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKV 427
           G V+A+G  QF + G G     Q + L  ++D           ++ G +H+  + +DG V
Sbjct: 305 GTVWAWGNYQFNEWGFGSSTPVQVQELDSVVD-----------IAAGTQHSLAVRNDGTV 353

Query: 428 FCWGWNKYGQLGLGDVIDRNIPSQV 452
           + WG N  GQLG G    R  P +V
Sbjct: 354 WAWGKNDNGQLGDGTSTARLTPIKV 378


>gi|188035869|ref|NP_082981.3| hect domain and RLD 3 [Mus musculus]
 gi|148666330|gb|EDK98746.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
 gi|148666331|gb|EDK98747.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
 gi|148666332|gb|EDK98748.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
 gi|148877724|gb|AAI45981.1| Hect domain and RLD 3 [Mus musculus]
 gi|148877951|gb|AAI45979.1| Hect domain and RLD 3 [Mus musculus]
          Length = 1050

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 113/254 (44%), Gaps = 30/254 (11%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
            I  VA G  H+LALSD GQ++ WG G +GQLGL +    V+ P  I             
Sbjct: 85  HIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ------------ 132

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDE 340
                         ++    +  ++CG  H   +   G   T+G   +GQ G G     +
Sbjct: 133 --------------KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
            SP  V SL GI +  VAAG  H+  +S  G V+ +G N  GQLG   ++    P  +  
Sbjct: 179 TSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKL 238

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVP 459
              + V    +SCG  HTAV+   G VF +G    GQLG   V D   P +V  + G   
Sbjct: 239 LRTQKV--VYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEV 296

Query: 460 RNVACGWWHTLLLA 473
             +ACG  HTL L 
Sbjct: 297 TQIACGRQHTLALV 310



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 140/308 (45%), Gaps = 51/308 (16%)

Query: 84  KHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGL 143
           + G  PE      +  I+  A G +H +A+++ G++++WG      +G   G L   T  
Sbjct: 70  REGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG------AGSD-GQLGLMTTE 122

Query: 144 DKDVFERQSSFLTEQVSPRSQVSRSSGG---TSSGTDGRGSGEEGSKRRRISLAKQTAES 200
           D     R    L ++++ ++ +  S G     +   DG+      +   ++ L K+    
Sbjct: 123 DSVAVPR----LIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 201 SSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR 260
           +S         P  V    G+ +A VAAGG H+ ALS  G V+GWG    GQLGL     
Sbjct: 179 TS---------PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE-- 227

Query: 261 MVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA 320
                           KDR +      + ++          V  I+CG  H+AV+T +G 
Sbjct: 228 ----------------KDRESPCHVKLLRTQK---------VVYISCGEEHTAVLTKSGG 262

Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFGGN 379
           + TFG G  GQ G  S +DE++P  V  L+G ++  +A G  HT+  + S G +YAFG  
Sbjct: 263 VFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCG 322

Query: 380 QFGQLGTG 387
             GQLGTG
Sbjct: 323 AKGQLGTG 330



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 82/276 (29%), Positives = 126/276 (45%), Gaps = 38/276 (13%)

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           SS  + + A P +        I  VA GG H++ L + G+V+  G   +GQLG     R 
Sbjct: 15  SSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLG---HERE 71

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
            + P  I  +                             ++  +ACG  HS  ++D G L
Sbjct: 72  GNKPEQIGAL--------------------------ADQHIIHVACGESHSLALSDRGQL 105

Query: 322 LTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
            ++G G  GQ G  +T+D ++ P  +  L    I  V+ G WH + +++DG  + +G N 
Sbjct: 106 FSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNS 165

Query: 381 FGQLGTGGD-QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG 439
            GQLG G +  ++T P+     SLE +    V+ G  H+  ++  G VF WG N  GQLG
Sbjct: 166 HGQLGLGKEFPSQTSPQ--RVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223

Query: 440 LGDVIDRNIPSQVTI---EGCVPRNVACGWWHTLLL 472
           L D  DR  P  V +   +  V   ++CG  HT +L
Sbjct: 224 LSDEKDRESPCHVKLLRTQKVV--YISCGEEHTAVL 257



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 94/372 (25%), Positives = 143/372 (38%), Gaps = 85/372 (22%)

Query: 39  PLTVGS-AWRDVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLP 95
           P  +G+ A + +    CG   ++A+SD  +L +WG+  D     +T+     +P      
Sbjct: 75  PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 96  TEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFL 155
            + +I++ + G  HC+A+   G+ +TWG           G L    GL K+         
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWG-------KNSHGQL----GLGKE--------F 175

Query: 156 TEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLA-------KQTAESSSSGDENL 208
             Q SP  Q  RS  G        G    G+    +SL+          A      DE  
Sbjct: 176 PSQTSP--QRVRSLEGIPLAQVAAG----GAHSFALSLSGAVFGWGMNNAGQLGLSDEKD 229

Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
              PC V L    ++  ++ G  HT  L+  G V+ +G G  GQLG              
Sbjct: 230 RESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG-------------- 275

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFRV---PGNYVKGIACGGRHS-AVITDAGALLTF 324
                             SVN E    RV    G+ V  IACG +H+ A++  +G +  F
Sbjct: 276 ----------------HDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAF 319

Query: 325 GWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFG 382
           G G  GQ G G T +   P+ V             G W  H+  +S+  D + +      
Sbjct: 320 GCGAKGQLGTGHTCNVKCPSPVK------------GHWAAHSSQLSARADRFKY--RVVK 365

Query: 383 QLGTGGDQAETL 394
           Q+ +GGDQ   L
Sbjct: 366 QIFSGGDQTFVL 377



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/124 (35%), Positives = 62/124 (50%), Gaps = 10/124 (8%)

Query: 354 IEGVAAGLWHTICISSDGDVYAFGGNQFGQLG--TGGDQAETLPRLLDAPSLENVHSKSV 411
           I+ VA G  H++ +  DG+VY  G N  GQLG    G++ E +  L D       H   V
Sbjct: 36  IKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKPEQIGALADQ------HIIHV 89

Query: 412 SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR-NIPSQV-TIEGCVPRNVACGWWHT 469
           +CG  H+  ++D G++F WG    GQLGL    D   +P  +  +       V+CG WH 
Sbjct: 90  ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149

Query: 470 LLLA 473
           L LA
Sbjct: 150 LALA 153


>gi|148666329|gb|EDK98745.1| hect domain and RLD 3, isoform CRA_a [Mus musculus]
          Length = 913

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 113/254 (44%), Gaps = 30/254 (11%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
            I  VA G  H+LALSD GQ++ WG G +GQLGL +    V+ P  I             
Sbjct: 85  HIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ------------ 132

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDE 340
                         ++    +  ++CG  H   +   G   T+G   +GQ G G     +
Sbjct: 133 --------------KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
            SP  V SL GI +  VAAG  H+  +S  G V+ +G N  GQLG   ++    P  +  
Sbjct: 179 TSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKL 238

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVP 459
              + V    +SCG  HTAV+   G VF +G    GQLG   V D   P +V  + G   
Sbjct: 239 LRTQKV--VYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEV 296

Query: 460 RNVACGWWHTLLLA 473
             +ACG  HTL L 
Sbjct: 297 TQIACGRQHTLALV 310



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 138/308 (44%), Gaps = 51/308 (16%)

Query: 84  KHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGL 143
           + G  PE      +  I+  A G +H +A+++ G++++WG           G L   T  
Sbjct: 70  REGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG-------AGSDGQLGLMTTE 122

Query: 144 DKDVFERQSSFLTEQVSPRSQVSRSSGG---TSSGTDGRGSGEEGSKRRRISLAKQTAES 200
           D     R    L ++++ ++ +  S G     +   DG+      +   ++ L K+    
Sbjct: 123 DSVAVPR----LIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 201 SSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR 260
           +S         P  V    G+ +A VAAGG H+ ALS  G V+GWG    GQLGL     
Sbjct: 179 TS---------PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE-- 227

Query: 261 MVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA 320
                           KDR +      + ++          V  I+CG  H+AV+T +G 
Sbjct: 228 ----------------KDRESPCHVKLLRTQK---------VVYISCGEEHTAVLTKSGG 262

Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFGGN 379
           + TFG G  GQ G  S +DE++P  V  L+G ++  +A G  HT+  + S G +YAFG  
Sbjct: 263 VFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCG 322

Query: 380 QFGQLGTG 387
             GQLGTG
Sbjct: 323 AKGQLGTG 330



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 82/276 (29%), Positives = 126/276 (45%), Gaps = 38/276 (13%)

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           SS  + + A P +        I  VA GG H++ L + G+V+  G   +GQLG     R 
Sbjct: 15  SSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLG---HERE 71

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
            + P  I  +                             ++  +ACG  HS  ++D G L
Sbjct: 72  GNKPEQIGALAD--------------------------QHIIHVACGESHSLALSDRGQL 105

Query: 322 LTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
            ++G G  GQ G  +T+D ++ P  +  L    I  V+ G WH + +++DG  + +G N 
Sbjct: 106 FSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNS 165

Query: 381 FGQLGTGGD-QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG 439
            GQLG G +  ++T P+     SLE +    V+ G  H+  ++  G VF WG N  GQLG
Sbjct: 166 HGQLGLGKEFPSQTSPQ--RVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223

Query: 440 LGDVIDRNIPSQVTI---EGCVPRNVACGWWHTLLL 472
           L D  DR  P  V +   +  V   ++CG  HT +L
Sbjct: 224 LSDEKDRESPCHVKLLRTQKVV--YISCGEEHTAVL 257



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 94/372 (25%), Positives = 143/372 (38%), Gaps = 85/372 (22%)

Query: 39  PLTVGS-AWRDVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLP 95
           P  +G+ A + +    CG   ++A+SD  +L +WG+  D     +T+     +P      
Sbjct: 75  PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 96  TEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFL 155
            + +I++ + G  HC+A+   G+ +TWG           G L    GL K+         
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWG-------KNSHGQL----GLGKE--------F 175

Query: 156 TEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLA-------KQTAESSSSGDENL 208
             Q SP  Q  RS  G        G    G+    +SL+          A      DE  
Sbjct: 176 PSQTSP--QRVRSLEGIPLAQVAAG----GAHSFALSLSGAVFGWGMNNAGQLGLSDEKD 229

Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
              PC V L    ++  ++ G  HT  L+  G V+ +G G  GQLG              
Sbjct: 230 RESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG-------------- 275

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFRV---PGNYVKGIACGGRHS-AVITDAGALLTF 324
                             SVN E    RV    G+ V  IACG +H+ A++  +G +  F
Sbjct: 276 ----------------HDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAF 319

Query: 325 GWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFG 382
           G G  GQ G G T +   P+ V             G W  H+  +S+  D + +      
Sbjct: 320 GCGAKGQLGTGHTCNVKCPSPVK------------GHWAAHSSQLSARADRFKY--RVVK 365

Query: 383 QLGTGGDQAETL 394
           Q+ +GGDQ   L
Sbjct: 366 QIFSGGDQTFVL 377



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/124 (35%), Positives = 62/124 (50%), Gaps = 10/124 (8%)

Query: 354 IEGVAAGLWHTICISSDGDVYAFGGNQFGQLG--TGGDQAETLPRLLDAPSLENVHSKSV 411
           I+ VA G  H++ +  DG+VY  G N  GQLG    G++ E +  L D       H   V
Sbjct: 36  IKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKPEQIGALADQ------HIIHV 89

Query: 412 SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR-NIPSQV-TIEGCVPRNVACGWWHT 469
           +CG  H+  ++D G++F WG    GQLGL    D   +P  +  +       V+CG WH 
Sbjct: 90  ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149

Query: 470 LLLA 473
           L LA
Sbjct: 150 LALA 153


>gi|242011327|ref|XP_002426404.1| uvb-resistance protein uvr8, putative [Pediculus humanus corporis]
 gi|212510503|gb|EEB13666.1| uvb-resistance protein uvr8, putative [Pediculus humanus corporis]
          Length = 357

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 59/174 (33%), Positives = 100/174 (57%), Gaps = 6/174 (3%)

Query: 304 GIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWH 363
            +  G  HS ++T++G +L+FG G  GQ G G+ +    P+ + +L G+++  +AAG WH
Sbjct: 175 NVVSGLEHSLILTESGCVLSFGNGSRGQLGNGTLNSIDQPSQIPALEGLKVINIAAGNWH 234

Query: 364 TICISSDGDVYAFGGNQFGQLGTGGDQAE-TL---PRLLDAPS-LENVHSKSVSCGARHT 418
           +  I+  GD+  +G N +GQL T  D  E TL   P  ++  +  EN+    VSCG+RHT
Sbjct: 235 SFAITDSGDLCGWGWNNYGQLATFEDDEEITLAAEPIFVEIITEEENIKVVDVSCGSRHT 294

Query: 419 AVIADDGKVFCWGWNKYGQLGLGDVIDRNIP-SQVTIEGCVPRNVACGWWHTLL 471
               D+G ++  GWN Y QLG+   +++    ++V++     R + CG W+++L
Sbjct: 295 IAKIDNGDLYGTGWNVYRQLGINSDLEKTTKFTKVSLINNQKRKLICGPWYSIL 348



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 91/219 (41%), Gaps = 40/219 (18%)

Query: 203 SGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMV 262
           S D+ L     ++  N   +   V +G  H+L L++ G V  +G G  GQLG G+ +  +
Sbjct: 157 SNDDKLQ----IIYSNISEKAINVVSGLEHSLILTESGCVLSFGNGSRGQLGNGT-LNSI 211

Query: 263 SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL 322
             P  IP +E                          G  V  IA G  HS  ITD+G L 
Sbjct: 212 DQPSQIPALE--------------------------GLKVINIAAGNWHSFAITDSGDLC 245

Query: 323 TFGWGLYGQCGQGSTDDELS-------PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYA 375
            +GW  YGQ      D+E++          ++    I++  V+ G  HTI    +GD+Y 
Sbjct: 246 GWGWNNYGQLATFEDDEEITLAAEPIFVEIITEEENIKVVDVSCGSRHTIAKIDNGDLYG 305

Query: 376 FGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
            G N + QLG   D  +T        SL N   + + CG
Sbjct: 306 TGWNVYRQLGINSDLEKTTK--FTKVSLINNQKRKLICG 342



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 66/160 (41%), Gaps = 30/160 (18%)

Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGL---GSRIRMVSSP 265
           S  P L     G+++  +AAG  H+ A++D G + GWG+   GQL        I + + P
Sbjct: 215 SQIPAL----EGLKVINIAAGNWHSFAITDSGDLCGWGWNNYGQLATFEDDEEITLAAEP 270

Query: 266 HPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFG 325
             +  I                  +E    +V       ++CG RH+    D G L   G
Sbjct: 271 IFVEII------------------TEEENIKVVD-----VSCGSRHTIAKIDNGDLYGTG 307

Query: 326 WGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTI 365
           W +Y Q G  S  ++ +     SL+  Q   +  G W++I
Sbjct: 308 WNVYRQLGINSDLEKTTKFTKVSLINNQKRKLICGPWYSI 347


>gi|355778311|gb|EHH63347.1| RCC1 domain-containing protein 1 [Macaca fascicularis]
          Length = 262

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/202 (32%), Positives = 99/202 (49%), Gaps = 43/202 (21%)

Query: 314 VITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDV 373
           ++  AG + ++G G +GQ G G+ + EL P  + +L G+ +  VAAG WH++C+S  GD+
Sbjct: 58  LLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLTMAEVAAGGWHSVCVSETGDI 117

Query: 374 YAFGGNQFGQLG-----------------TGGDQ---------------------AETLP 395
           Y +G N+ GQL                  TG ++                      +  P
Sbjct: 118 YIWGWNESGQLALPTRNLAEDGETVAREATGLNEDGSQVKRTGRVEDGAPAPFIAVQPFP 177

Query: 396 RLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI- 454
            LLD P   +  +  VSCG+RHTAV+   G+++ WGW KYGQLG  D    + P +V   
Sbjct: 178 ALLDLPLGSD--AVKVSCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDWPRRVEYF 235

Query: 455 --EGCVPRNVACGWWHTLLLAV 474
             +    + V CG W+T + AV
Sbjct: 236 VDKQLQVKTVTCGPWNTYVYAV 257



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 80/173 (46%), Gaps = 15/173 (8%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P L+    G+ +A VAAGG H++ +S+ G ++ WG+   GQL L +R  +      +   
Sbjct: 87  PRLLEALQGLTMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTR-NLAEDGETVARE 145

Query: 272 ESSYGKDRSAALSRGSVNSEGPG-----------FRVP-GNYVKGIACGGRHSAVITDAG 319
            +   +D S     G V    P              +P G+    ++CG RH+AV+T  G
Sbjct: 146 ATGLNEDGSQVKRTGRVEDGAPAPFIAVQPFPALLDLPLGSDAVKVSCGSRHTAVVTRTG 205

Query: 320 ALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG--IQIEGVAAGLWHTICISSD 370
            L T+GWG YGQ G   T     P  V   +   +Q++ V  G W+T   + +
Sbjct: 206 ELYTWGWGKYGQLGHEDTTSLDWPRRVEYFVDKQLQVKTVTCGPWNTYVYAVE 258



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 48/76 (63%), Gaps = 2/76 (2%)

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           + + + G V+++GG + GQLG G  +AE  PRLL+A  L+ +    V+ G  H+  +++ 
Sbjct: 57  LLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEA--LQGLTMAEVAAGGWHSVCVSET 114

Query: 425 GKVFCWGWNKYGQLGL 440
           G ++ WGWN+ GQL L
Sbjct: 115 GDIYIWGWNESGQLAL 130



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 93/221 (42%), Gaps = 55/221 (24%)

Query: 48  DVCGGGCGFAMAISDSRKLITWGSTDDLGQSYV-TSGKHGEI------PEPFPLPTEA-- 98
           DVC     ++     +R L+     D  GQ +    G+HG++       E  P   EA  
Sbjct: 40  DVCRVSASWSYTAFVTRLLL-----DAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQ 94

Query: 99  --SIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGT---GLDKDVFERQSS 153
             ++ + AAG  H V V+E G++Y WGW E        G L+  T     D +   R+++
Sbjct: 95  GLTMAEVAAGGWHSVCVSETGDIYIWGWNES-------GQLALPTRNLAEDGETVAREAT 147

Query: 154 FLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPC 213
            L E     SQV R+           G  E+G+    I++                 FP 
Sbjct: 148 GLNED---GSQVKRT-----------GRVEDGAPAPFIAV---------------QPFPA 178

Query: 214 LVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG 254
           L+ L  G     V+ G RHT  ++  G+++ WG+G  GQLG
Sbjct: 179 LLDLPLGSDAVKVSCGSRHTAVVTRTGELYTWGWGKYGQLG 219


>gi|12856817|dbj|BAB30794.1| unnamed protein product [Mus musculus]
          Length = 913

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 113/254 (44%), Gaps = 30/254 (11%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
            I  VA G  H+LALSD GQ++ WG G +GQLGL +    V+ P  I             
Sbjct: 85  HIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ------------ 132

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDE 340
                         ++    +  ++CG  H   +   G   T+G   +GQ G G     +
Sbjct: 133 --------------KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
            SP  V SL GI +  VAAG  H+  +S  G V+ +G N  GQLG   ++    P  +  
Sbjct: 179 TSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKL 238

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVP 459
              + V    +SCG  HTAV+   G VF +G    GQLG   V D   P +V  + G   
Sbjct: 239 LRTQKV--VYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEV 296

Query: 460 RNVACGWWHTLLLA 473
             +ACG  HTL L 
Sbjct: 297 TQIACGRQHTLALV 310



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 138/308 (44%), Gaps = 51/308 (16%)

Query: 84  KHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGL 143
           + G  PE      +  I+  A G +H +A+++ G++++WG           G L   T  
Sbjct: 70  REGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG-------AGSDGQLGLMTTE 122

Query: 144 DKDVFERQSSFLTEQVSPRSQVSRSSGG---TSSGTDGRGSGEEGSKRRRISLAKQTAES 200
           D     R    L ++++ ++ +  S G     +   DG+      +   ++ L K+    
Sbjct: 123 DSVAVPR----LIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 201 SSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR 260
           +S         P  V    G+ +A VAAGG H+ ALS  G V+GWG    GQLGL     
Sbjct: 179 TS---------PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE-- 227

Query: 261 MVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA 320
                           KDR +      + ++          V  I+CG  H+AV+T +G 
Sbjct: 228 ----------------KDRESPCHVKLLRTQK---------VVYISCGEEHTAVLTKSGG 262

Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFGGN 379
           + TFG G  GQ G  S +DE++P  V  L+G ++  +A G  HT+  + S G +YAFG  
Sbjct: 263 VFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCG 322

Query: 380 QFGQLGTG 387
             GQLGTG
Sbjct: 323 AKGQLGTG 330



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 82/276 (29%), Positives = 126/276 (45%), Gaps = 38/276 (13%)

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           SS  + + A P +        I  VA GG H++ L + G+V+  G   +GQLG     R 
Sbjct: 15  SSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLG---HERE 71

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
            + P  I  +                             ++  +ACG  HS  ++D G L
Sbjct: 72  GNKPEQIGALAD--------------------------QHIIHVACGESHSLALSDRGQL 105

Query: 322 LTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
            ++G G  GQ G  +T+D ++ P  +  L    I  V+ G WH + +++DG  + +G N 
Sbjct: 106 FSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNS 165

Query: 381 FGQLGTGGD-QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG 439
            GQLG G +  ++T P+     SLE +    V+ G  H+  ++  G VF WG N  GQLG
Sbjct: 166 HGQLGLGKEFPSQTSPQ--RVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223

Query: 440 LGDVIDRNIPSQVTI---EGCVPRNVACGWWHTLLL 472
           L D  DR  P  V +   +  V   ++CG  HT +L
Sbjct: 224 LSDEKDRESPCHVKLLRTQKVV--YISCGEEHTAVL 257



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 94/372 (25%), Positives = 143/372 (38%), Gaps = 85/372 (22%)

Query: 39  PLTVGS-AWRDVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLP 95
           P  +G+ A + +    CG   ++A+SD  +L +WG+  D     +T+     +P      
Sbjct: 75  PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 96  TEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFL 155
            + +I++ + G  HC+A+   G+ +TWG           G L    GL K+         
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWG-------KNSHGQL----GLGKE--------F 175

Query: 156 TEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLA-------KQTAESSSSGDENL 208
             Q SP  Q  RS  G        G    G+    +SL+          A      DE  
Sbjct: 176 PSQTSP--QRVRSLEGIPLAQVAAG----GAHSFALSLSGAVFGWGMNNAGQLGLSDEKD 229

Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
              PC V L    ++  ++ G  HT  L+  G V+ +G G  GQLG              
Sbjct: 230 RESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG-------------- 275

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFRV---PGNYVKGIACGGRHS-AVITDAGALLTF 324
                             SVN E    RV    G+ V  IACG +H+ A++  +G +  F
Sbjct: 276 ----------------HDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAF 319

Query: 325 GWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFG 382
           G G  GQ G G T +   P+ V             G W  H+  +S+  D + +      
Sbjct: 320 GCGAKGQLGTGHTCNVKCPSPVK------------GHWAAHSSQLSARADRFKY--RVVK 365

Query: 383 QLGTGGDQAETL 394
           Q+ +GGDQ   L
Sbjct: 366 QIFSGGDQTFVL 377



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/124 (35%), Positives = 62/124 (50%), Gaps = 10/124 (8%)

Query: 354 IEGVAAGLWHTICISSDGDVYAFGGNQFGQLG--TGGDQAETLPRLLDAPSLENVHSKSV 411
           I+ VA G  H++ +  DG+VY  G N  GQLG    G++ E +  L D       H   V
Sbjct: 36  IKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKPEQIGALADQ------HIIHV 89

Query: 412 SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR-NIPSQV-TIEGCVPRNVACGWWHT 469
           +CG  H+  ++D G++F WG    GQLGL    D   +P  +  +       V+CG WH 
Sbjct: 90  ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149

Query: 470 LLLA 473
           L LA
Sbjct: 150 LALA 153


>gi|350587982|ref|XP_003129374.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Sus scrofa]
          Length = 1050

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 114/254 (44%), Gaps = 36/254 (14%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
            I  VA G  H+LALSD GQ++ WG G +GQLGL +    V+ P  I             
Sbjct: 85  HIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEESVAVPRLIQ------------ 132

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDE 340
                         ++    +  ++CG  H   +   G   T+G   +GQ G G     +
Sbjct: 133 --------------KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLP---RL 397
            SP  V SL GI +  VAAG  H+  +S  G V+ +G N  GQLG   ++    P   +L
Sbjct: 179 ASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKL 238

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEG 456
           L A  +       +SCG  HTAV+   G VF +G    GQLG   + D   P +V  + G
Sbjct: 239 LRAQKV-----VYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMG 293

Query: 457 CVPRNVACGWWHTL 470
                +ACG  HTL
Sbjct: 294 SEVTQIACGRQHTL 307



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 140/308 (45%), Gaps = 51/308 (16%)

Query: 84  KHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGL 143
           + G  PE      +  IV  A G +H +A+++ G++++WG      +G   G L   T  
Sbjct: 70  REGNKPEQIGALADEHIVHVACGESHSLALSDRGQLFSWG------AGSD-GQLGLMTTE 122

Query: 144 DKDVFERQSSFLTEQVSPRSQVSRSSGG---TSSGTDGRGSGEEGSKRRRISLAKQTAES 200
           +     R    L ++++ ++ +  S G     +   DG+      +   ++ L K+    
Sbjct: 123 ESVAVPR----LIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 201 SSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR 260
           +S         P  V    G+ +A VAAGG H+ ALS  G V+GWG    GQLGL     
Sbjct: 179 AS---------PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE-- 227

Query: 261 MVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA 320
                           +DR +      + ++          V  I+CG  H+AV+T +G 
Sbjct: 228 ----------------EDRESPCHVKLLRAQK---------VVYISCGEEHTAVLTKSGG 262

Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFGGN 379
           + TFG G  GQ G  S +DE++P  V  L+G ++  +A G  HT+  + S G +YAFG  
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 380 QFGQLGTG 387
             GQLGTG
Sbjct: 323 ARGQLGTG 330



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 119/253 (47%), Gaps = 34/253 (13%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  VA GG H++ L + G+V+  G   +GQLG     R  + P  I              
Sbjct: 36  VKEVACGGDHSVFLLEDGEVYTCGLNTKGQLG---HEREGNKPEQI-------------- 78

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
              G++  E         ++  +ACG  HS  ++D G L ++G G  GQ G  +T++ ++
Sbjct: 79  ---GALADE---------HIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEESVA 126

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD-QAETLPRLLDA 400
            P  +  L    I  V+ G WH + +++DG  + +G N  GQLG G +  ++  P+    
Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQ--RV 184

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVP 459
            SLE +    V+ G  H+  ++  G VF WG N  GQLGL D  DR  P  V  +     
Sbjct: 185 RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRAQKV 244

Query: 460 RNVACGWWHTLLL 472
             ++CG  HT +L
Sbjct: 245 VYISCGEEHTAVL 257



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 89/354 (25%), Positives = 138/354 (38%), Gaps = 78/354 (22%)

Query: 53  GCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
            CG   ++A+SD  +L +WG+  D     +T+ +   +P       + +I++ + G  HC
Sbjct: 90  ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEESVAVPRLIQKLNQQTILQVSCGNWHC 149

Query: 111 VAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSG 170
           +A+   G+ +TWG           G L    GL K+           Q SP  Q  RS  
Sbjct: 150 LALAADGQFFTWG-------KNSHGQL----GLGKE--------FPSQASP--QRVRSLE 188

Query: 171 GTSSGTDGRGSGEEGSKRRRISLA-------KQTAESSSSGDENLSAFPCLVTLNPGVRI 223
           G        G    G+    +SL+          A      DE     PC V L    ++
Sbjct: 189 GIPLAQVAAG----GAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRAQKV 244

Query: 224 ATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAAL 283
             ++ G  HT  L+  G V+ +G G  GQLG  S   M    +P   +E           
Sbjct: 245 VYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDS---MNDEVNPRRVLE----------- 290

Query: 284 SRGSVNSEGPGFRVPGNYVKGIACGGRHS-AVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                        + G+ V  IACG +H+ A +  +G +  FG G  GQ G G T +   
Sbjct: 291 -------------LMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKC 337

Query: 343 PNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETL 394
           P+ V             G W  H+  +S+  D + +  +   Q+ +GGDQ   L
Sbjct: 338 PSPVK------------GYWAAHSGQLSARADRFKY--HIVKQIFSGGDQTFVL 377



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 62/124 (50%), Gaps = 10/124 (8%)

Query: 354 IEGVAAGLWHTICISSDGDVYAFGGNQFGQLG--TGGDQAETLPRLLDAPSLENVHSKSV 411
           ++ VA G  H++ +  DG+VY  G N  GQLG    G++ E +  L D       H   V
Sbjct: 36  VKEVACGGDHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQIGALADE------HIVHV 89

Query: 412 SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR-NIPSQV-TIEGCVPRNVACGWWHT 469
           +CG  H+  ++D G++F WG    GQLGL    +   +P  +  +       V+CG WH 
Sbjct: 90  ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEESVAVPRLIQKLNQQTILQVSCGNWHC 149

Query: 470 LLLA 473
           L LA
Sbjct: 150 LALA 153


>gi|443688897|gb|ELT91442.1| hypothetical protein CAPTEDRAFT_169244 [Capitella teleta]
          Length = 1060

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 76/249 (30%), Positives = 121/249 (48%), Gaps = 28/249 (11%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +   ++G +H+  L+D GQV+ WG   + QLG G   ++ S+   IP             
Sbjct: 96  VLQASSGTKHSTVLTDAGQVFTWGSNEDNQLGRG---QVDSASTSIP------------R 140

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
           + RG  + +          V  +ACG  H+  +T  G + T+G   +GQ G  +   +  
Sbjct: 141 MVRGLADHK----------VVQVACGSAHTVGLTATGQIYTWGSNNHGQLGLANKTPQNE 190

Query: 343 PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPS 402
           P  VS + G+ I  VAAG  H + ++  G ++A+G N FGQLG G DQ    P L+   +
Sbjct: 191 PQWVSCISGLPIVRVAAGADHNLVLTISGALFAWGCNSFGQLGVGDDQDRGAPTLVK--T 248

Query: 403 LENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRN 461
           L N    +++CG  H+  +  DG VF +G   YGQLG     +  +P +V  + G     
Sbjct: 249 LRNQGICALACGDDHSLALTRDGGVFTFGAGMYGQLGHNTSNNELLPRKVFELMGSSVTQ 308

Query: 462 VACGWWHTL 470
           +ACG  H++
Sbjct: 309 IACGRKHSI 317



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 72/232 (31%), Positives = 107/232 (46%), Gaps = 30/232 (12%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
           ++  VA G  HT+ L+  GQ++ WG    GQLGL ++    + P  + CI          
Sbjct: 149 KVVQVACGSAHTVGLTATGQIYTWGSNNHGQLGLANKTPQ-NEPQWVSCI---------- 197

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL 341
                   S  P  RV        A G  H+ V+T +GAL  +G   +GQ G G   D  
Sbjct: 198 --------SGLPIVRV--------AAGADHNLVLTISGALFAWGCNSFGQLGVGDDQDRG 241

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           +P  V +L    I  +A G  H++ ++ DG V+ FG   +GQLG      E LPR     
Sbjct: 242 APTLVKTLRNQGICALACGDDHSLALTRDGGVFTFGAGMYGQLGHNTSNNELLPR--KVF 299

Query: 402 SLENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
            L       ++CG +H+ A +   G+V+ +G    GQLG G  ++R  P+ V
Sbjct: 300 ELMGSSVTQIACGRKHSIAYVPSSGRVYVFGLGGNGQLGTGSTVNRMSPAMV 351



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/156 (32%), Positives = 78/156 (50%), Gaps = 9/156 (5%)

Query: 320 ALLTFGWGLYGQCGQGSTDDELS--PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
           ++L +G   +GQ G G  ++E    P  + S   +++  +A GL HT+ +  DG V + G
Sbjct: 10  SVLCWGSLTHGQLGLGGLEEETVTLPREIRSFCNVEVVHIACGLQHTLFVKKDGRVLSCG 69

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQ 437
            N +GQL  G ++    P L+D+    NV     S G +H+ V+ D G+VF WG N+  Q
Sbjct: 70  NNDYGQL--GHEKPCKRPALIDSLGERNV--LQASSGTKHSTVLTDAGQVFTWGSNEDNQ 125

Query: 438 LGLGDVIDRNIPSQVTIEGCVPRN---VACGWWHTL 470
           LG G V   +      + G        VACG  HT+
Sbjct: 126 LGRGQVDSASTSIPRMVRGLADHKVVQVACGSAHTV 161


>gi|207080016|ref|NP_001128757.1| RCC1 and BTB domain-containing protein 2 isoform 2 [Pongo abelii]
 gi|55726291|emb|CAH89917.1| hypothetical protein [Pongo abelii]
          Length = 527

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/203 (34%), Positives = 110/203 (54%), Gaps = 7/203 (3%)

Query: 276 GKDRSAALSRGSVNSEGPGFRVPGNYVKGIAC----GGRHSAVITDAGALLTFGWGLYGQ 331
           G +    L  G V S     R+     K IAC     G H  + T  G + T+G   Y Q
Sbjct: 47  GTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQ 106

Query: 332 CGQGSTDDELSPNCVSS-LLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            G G+T+  L P  +S+ L   Q+  VA G +H++ ++SDG+V+A+G N  GQ+G+G   
Sbjct: 107 LGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTV 166

Query: 391 AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
            + +PR +    L+N    +++CG      + D G+V+ WG+N  GQLGLG+  ++  P 
Sbjct: 167 NQPIPRRVTG-CLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPC 225

Query: 451 QVT-IEGCVPRNVACGWWHTLLL 472
           +V  ++G   + VACG+ HTL+L
Sbjct: 226 RVAALQGIRVQRVACGYAHTLVL 248



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 121/244 (49%), Gaps = 31/244 (12%)

Query: 214 LVTLNPGVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIE 272
           L +LN G +IA ++ G G H +  +  G+V+ WG+    QLG G+     ++   +PC  
Sbjct: 68  LDSLN-GKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT-----TNHGLVPCHI 121

Query: 273 SSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQC 332
           S+                      +    V  +ACG  HS V+T  G +  +G+   GQ 
Sbjct: 122 ST---------------------NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQV 160

Query: 333 GQGSTDDELSPNCVSSLLGIQIE-GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
           G GST ++  P  V+  L  ++   +A G    + +   G+VY +G N  GQLG G    
Sbjct: 161 GSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGN 220

Query: 392 ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
           +  P      +L+ +  + V+CG  HT V+ D+G+V+ WG N YGQLG G+  +++ P+ 
Sbjct: 221 QPTP--CRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 278

Query: 452 VTIE 455
           VT+E
Sbjct: 279 VTVE 282



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 109/231 (47%), Gaps = 30/231 (12%)

Query: 203 SGDENLSAFPCLVTLN-PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +G  N    PC ++ N    ++  VA G  H+L L+  G+V+ WGY   GQ+G GS +  
Sbjct: 109 NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVN- 167

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
                PIP         R     +  V             V  IACG      + D G +
Sbjct: 168 ----QPIP--------RRVTGCLQNKV-------------VVTIACGQMCCMAVVDTGEV 202

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             +G+   GQ G G++ ++ +P  V++L GI+++ VA G  HT+ ++ +G VYA+G N +
Sbjct: 203 YVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSY 262

Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           GQLGTG    ++ P  +       +  +  +C + HT A     G V+ WG
Sbjct: 263 GQLGTGNKSNQSYPTPVTVEKDRII--EIAACHSTHTSAAKTQGGHVYMWG 311



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 56/115 (48%), Gaps = 23/115 (20%)

Query: 370 DGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR----HTAVIADDG 425
           + +++  G N  G LG G  Q+   PR LD+     ++ K ++C +     H  +   +G
Sbjct: 40  NDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS-----LNGKKIACLSYGSGPHIVLATTEG 94

Query: 426 KVFCWGWNKYGQLGLGDV--------IDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           +VF WG N Y QLG G          I  N+ ++  IE      VACG +H+L+L
Sbjct: 95  EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIE------VACGSYHSLVL 143



 Score = 40.0 bits (92), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 55/133 (41%), Gaps = 17/133 (12%)

Query: 14  VFMWGYL-PGALPQRSPILSPLVVRLP--LTVGSAWRDVCGGGCGFAMAISDSRKLITWG 70
           VF WGY   G +   S +  P+  R+   L         CG  C   MA+ D+ ++  WG
Sbjct: 149 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMC--CMAVVDTGEVYVWG 206

Query: 71  STDDLGQSYVTSGKHGEIPEPFPLPTEASI--VKAAAGWAHCVAVTEGGEVYTWGWKECV 128
                G   +  G  G  P P  +     I   + A G+AH + +T+ G+VY WG     
Sbjct: 207 YN---GNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG----- 258

Query: 129 PSGRVFGDLSTGT 141
                +G L TG 
Sbjct: 259 --ANSYGQLGTGN 269


>gi|345325115|ref|XP_001514077.2| PREDICTED: RCC1 and BTB domain-containing protein 2
           [Ornithorhynchus anatinus]
          Length = 721

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/203 (33%), Positives = 111/203 (54%), Gaps = 7/203 (3%)

Query: 276 GKDRSAALSRGSVNSEGPGFRVPGNYVKGIAC----GGRHSAVITDAGALLTFGWGLYGQ 331
           G + S  L  G V +     R+     K I C     G H  V T  G + T+G   Y Q
Sbjct: 241 GTNCSGCLGTGDVQNTIEPRRIDSLCGKKITCLSYGSGPHVVVATAEGEVYTWGHNAYSQ 300

Query: 332 CGQGSTDDELSPNCVSS-LLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            G G+T+  L P  VS+ L+  ++  VA G  H++ ++SDG+VYA+G N  GQ+G+G   
Sbjct: 301 LGNGTTNHGLIPCHVSTNLVNKKVVEVACGSHHSLVLTSDGEVYAWGYNNSGQVGSGSTA 360

Query: 391 AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
            + +PR + +  L+N  + +++CG   +  + + G+V+ WG+N  GQLGLG   ++  P 
Sbjct: 361 NQPIPRRVTS-CLQNKIATNIACGQMCSMAVVESGEVYVWGYNGNGQLGLGSSGNQPTPC 419

Query: 451 QVT-IEGCVPRNVACGWWHTLLL 472
           ++  ++G   + V CG+ HTL+L
Sbjct: 420 RIAALQGIRVQRVTCGYAHTLVL 442



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 115/231 (49%), Gaps = 30/231 (12%)

Query: 203 SGDENLSAFPCLVTLN-PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +G  N    PC V+ N    ++  VA G  H+L L+  G+V+ WGY   GQ+G GS    
Sbjct: 303 NGTTNHGLIPCHVSTNLVNKKVVEVACGSHHSLVLTSDGEVYAWGYNNSGQVGSGS---- 358

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
            ++  PIP   +S  +++ A                       IACG   S  + ++G +
Sbjct: 359 -TANQPIPRRVTSCLQNKIAT---------------------NIACGQMCSMAVVESGEV 396

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             +G+   GQ G GS+ ++ +P  +++L GI+++ V  G  HT+ ++ +G +YA+G N +
Sbjct: 397 YVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVTCGYAHTLVLTDEGQLYAWGANSY 456

Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           GQLGTG    ++ P  +  P  ++   +  +C + HT A     G V+ WG
Sbjct: 457 GQLGTGNKSNQSYP--IPVPVEKDRIIEIAACHSAHTSAAKTQSGHVYMWG 505



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 75/238 (31%), Positives = 119/238 (50%), Gaps = 30/238 (12%)

Query: 220 GVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
           G +I  ++ G G H +  +  G+V+ WG+    QLG G+     ++   IPC        
Sbjct: 267 GKKITCLSYGSGPHVVVATAEGEVYTWGHNAYSQLGNGT-----TNHGLIPC-------- 313

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
               +S   VN +          V  +ACG  HS V+T  G +  +G+   GQ G GST 
Sbjct: 314 ---HVSTNLVNKK----------VVEVACGSHHSLVLTSDGEVYAWGYNNSGQVGSGSTA 360

Query: 339 DELSPNCVSSLLGIQI-EGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
           ++  P  V+S L  +I   +A G   ++ +   G+VY +G N  GQLG G    +  P  
Sbjct: 361 NQPIPRRVTSCLQNKIATNIACGQMCSMAVVESGEVYVWGYNGNGQLGLGSSGNQPTPCR 420

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
           + A  L+ +  + V+CG  HT V+ D+G+++ WG N YGQLG G+  +++ P  V +E
Sbjct: 421 IAA--LQGIRVQRVTCGYAHTLVLTDEGQLYAWGANSYGQLGTGNKSNQSYPIPVPVE 476



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 90/216 (41%), Gaps = 41/216 (18%)

Query: 65  KLITWG--STDDLGQSYVTSGKHGEIPEPFPLP-TEASIVKAAAGWAHCVAVTEGGEVYT 121
           ++ TWG  +   LG     +  HG IP           +V+ A G  H + +T  GEVY 
Sbjct: 289 EVYTWGHNAYSQLGNG---TTNHGLIPCHVSTNLVNKKVVEVACGSHHSLVLTSDGEVYA 345

Query: 122 WGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPR-------SQVSRSSGGTSS 174
           WG+          G + +G+  ++ +  R +S L  +++         S     SG    
Sbjct: 346 WGYNNS-------GQVGSGSTANQPIPRRVTSCLQNKIATNIACGQMCSMAVVESGEVYV 398

Query: 175 -GTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHT 233
            G +G G    G                SSG++     PC +    G+R+  V  G  HT
Sbjct: 399 WGYNGNGQLGLG----------------SSGNQ---PTPCRIAALQGIRVQRVTCGYAHT 439

Query: 234 LALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP 269
           L L+D GQ++ WG    GQLG G++    S P P+P
Sbjct: 440 LVLTDEGQLYAWGANSYGQLGTGNKSNQ-SYPIPVP 474


>gi|408500311|ref|YP_006864230.1| putative regulator of chromosome condensation, RCC1 [Bifidobacterium
            asteroides PRL2011]
 gi|408465135|gb|AFU70664.1| putative regulator of chromosome condensation, RCC1 [Bifidobacterium
            asteroides PRL2011]
          Length = 1160

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/276 (28%), Positives = 125/276 (45%), Gaps = 43/276 (15%)

Query: 220  GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR-----MVSSPHP---IPCI 271
            G+    V+AG  H+LAL   G +W WG+   G+LG G+ I      +   P     +  I
Sbjct: 779  GLTAVQVSAGYYHSLALDARGNIWAWGFNQFGELGNGNNINSAIPTLAQYPRDAGTVTAI 838

Query: 272  ESSYGKDRSAALSR---------------GSVNSEGPGFRVPGNYVKG--------IACG 308
            + S G   +AA+                 G+ N+      VP  Y +         ++ G
Sbjct: 839  QVSGGFHHTAAIDTKGNTWSWGWNWFGQLGNGNNIDSAIPVPVQYPRDAGTVRAIQVSAG 898

Query: 309  GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSP--------NCVSSLLGIQIEGVAAG 360
              HS +I   G    +GW   G+ G GS+  + +P            ++  IQ   V+AG
Sbjct: 899  ADHSLIIDTKGNTWAWGWNQLGELGNGSSSADANPVPGMVKYPENAGTVTAIQ---VSAG 955

Query: 361  LWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLEN-VHSKSVSCGARHTA 419
             +H++ I  +G+ +A+GGN  G+LG G      +P L+  P     V +  VS G  H+ 
Sbjct: 956  GYHSLAIDKNGNAWAWGGNDSGELGIGTTSKSEIPALVQYPKNAGAVTTVQVSAGGYHSL 1015

Query: 420  VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
             I  +GK + WG+N++GQLG G + + +IP+ V   
Sbjct: 1016 GIDKEGKTWAWGYNQFGQLGNGTISNSSIPTPVAFN 1051



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 114/256 (44%), Gaps = 45/256 (17%)

Query: 233 TLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEG 292
           TLA+   G  + WG    GQLG G+  +                +++   + + +     
Sbjct: 679 TLAVGSDGNAYAWGRNNYGQLGDGTLTQ----------------RNKPVIVKKPA----- 717

Query: 293 PGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE-------LSPNC 345
            G      YV+ ++ G   S  +   G +  +G    GQ G GS+          + PN 
Sbjct: 718 -GASADFTYVQ-VSAGDEQSLAVGSDGYVYAWGNNESGQLGNGSSGGYSTVPLRVIDPND 775

Query: 346 VSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP-SLE 404
             S  G+    V+AG +H++ + + G+++A+G NQFG+LG G +    +P L   P    
Sbjct: 776 PRS--GLTAVQVSAGYYHSLALDARGNIWAWGFNQFGELGNGNNINSAIPTLAQYPRDAG 833

Query: 405 NVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRN--- 461
            V +  VS G  HTA I   G  + WGWN +GQLG G+ ID  IP  V      PR+   
Sbjct: 834 TVTAIQVSGGFHHTAAIDTKGNTWSWGWNWFGQLGNGNNIDSAIPVPV----QYPRDAGT 889

Query: 462 -----VACGWWHTLLL 472
                V+ G  H+L++
Sbjct: 890 VRAIQVSAGADHSLII 905



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 92/385 (23%), Positives = 160/385 (41%), Gaps = 52/385 (13%)

Query: 22   GALPQRSPILSPLVVRLPLTVGSAWRDV-CGGGCGFAMAISDSRKLITWGSTDDLGQSYV 80
            G L QR+    P++V+ P    + +  V    G   ++A+     +  WG+ +       
Sbjct: 702  GTLTQRN---KPVIVKKPAGASADFTYVQVSAGDEQSLAVGSDGYVYAWGNNESGQLGNG 758

Query: 81   TSGKHGEIP----EPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGD 136
            +SG +  +P    +P    +  + V+ +AG+ H +A+   G ++ WG+ +       FG+
Sbjct: 759  SSGGYSTVPLRVIDPNDPRSGLTAVQVSAGYYHSLALDARGNIWAWGFNQ-------FGE 811

Query: 137  LSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQ 196
            L  G  ++       S+  T    PR   + ++   S G     + +  +K    S    
Sbjct: 812  LGNGNNIN-------SAIPTLAQYPRDAGTVTAIQVSGGFHHTAAID--TKGNTWSWGWN 862

Query: 197  TAESSSSGDENLSAFPCLVTLNPG---VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQL 253
                  +G+   SA P  V        VR   V+AG  H+L +   G  W WG+   G+L
Sbjct: 863  WFGQLGNGNNIDSAIPVPVQYPRDAGTVRAIQVSAGADHSLIIDTKGNTWAWGWNQLGEL 922

Query: 254  GLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSA 313
            G GS     +  +P+P +   Y ++       G+V +              ++ GG HS 
Sbjct: 923  GNGSS---SADANPVPGM-VKYPEN------AGTVTA------------IQVSAGGYHSL 960

Query: 314  VITDAGALLTFGWGLYGQCGQGSTDDELSPNCV---SSLLGIQIEGVAAGLWHTICISSD 370
             I   G    +G    G+ G G+T     P  V    +   +    V+AG +H++ I  +
Sbjct: 961  AIDKNGNAWAWGGNDSGELGIGTTSKSEIPALVQYPKNAGAVTTVQVSAGGYHSLGIDKE 1020

Query: 371  GDVYAFGGNQFGQLGTGGDQAETLP 395
            G  +A+G NQFGQLG G     ++P
Sbjct: 1021 GKTWAWGYNQFGQLGNGTISNSSIP 1045



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 73/271 (26%), Positives = 104/271 (38%), Gaps = 34/271 (12%)

Query: 33   PLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPF 92
            P + + P   G+       GG     AI       +WG  +  GQ    +     IP P 
Sbjct: 823  PTLAQYPRDAGTVTAIQVSGGFHHTAAIDTKGNTWSWG-WNWFGQLGNGNNIDSAIPVPV 881

Query: 93   PLPTEASIVKA---AAGWAHCVAVTEGGEVYTWGWKEC--VPSGRVFGDLSTGTGLDKDV 147
              P +A  V+A   +AG  H + +   G  + WGW +   + +G    D +   G+ K  
Sbjct: 882  QYPRDAGTVRAIQVSAGADHSLIIDTKGNTWAWGWNQLGELGNGSSSADANPVPGMVK-Y 940

Query: 148  FERQSSFLTEQVSP--RSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGD 205
             E   +    QVS      ++    G +    G  SGE G                  G 
Sbjct: 941  PENAGTVTAIQVSAGGYHSLAIDKNGNAWAWGGNDSGELG-----------------IGT 983

Query: 206  ENLSAFPCLVTL--NPG-VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMV 262
             + S  P LV    N G V    V+AGG H+L +   G+ W WGY   GQLG G+ I   
Sbjct: 984  TSKSEIPALVQYPKNAGAVTTVQVSAGGYHSLGIDKEGKTWAWGYNQFGQLGNGT-ISNS 1042

Query: 263  SSPHPIPC----IESSYGKDRSAALSRGSVN 289
            S P P+      + SS   D S A +   +N
Sbjct: 1043 SIPTPVAFNLSQVISSVTFDTSPATNLNYIN 1073



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 104/278 (37%), Gaps = 48/278 (17%)

Query: 88   IPEPFPLPTEASIVKA---AAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLD 144
            IP     P +A  V A   + G+ H  A+   G  ++WGW         FG L  G  +D
Sbjct: 822  IPTLAQYPRDAGTVTAIQVSGGFHHTAAIDTKGNTWSWGWN-------WFGQLGNGNNID 874

Query: 145  KDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAK--QTAESSS 202
                   S+       PR   +  +   S+G D     +           +  +    SS
Sbjct: 875  -------SAIPVPVQYPRDAGTVRAIQVSAGADHSLIIDTKGNTWAWGWNQLGELGNGSS 927

Query: 203  SGDENLSAFPCLVTL--NPGVRIA-TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
            S D N    P +V    N G   A  V+AGG H+LA+   G  W WG    G+LG+G+  
Sbjct: 928  SADAN--PVPGMVKYPENAGTVTAIQVSAGGYHSLAIDKNGNAWAWGGNDSGELGIGT-- 983

Query: 260  RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAG 319
               +S   IP +   Y K+  A  +                    ++ GG HS  I   G
Sbjct: 984  ---TSKSEIPAL-VQYPKNAGAVTT------------------VQVSAGGYHSLGIDKEG 1021

Query: 320  ALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGV 357
                +G+  +GQ G G+  +   P  V+  L   I  V
Sbjct: 1022 KTWAWGYNQFGQLGNGTISNSSIPTPVAFNLSQVISSV 1059


>gi|295789055|ref|NP_001171421.1| X-linked retinitis pigmentosa GTPase regulator isoform 1 [Mus
           musculus]
          Length = 1039

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 95/171 (55%), Gaps = 4/171 (2%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           ++CG  H+A++T    L  FG   +GQ G GS    + P C+ +L   +++  A G  HT
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 137

Query: 365 ICISSDGDVYAFGGNQFGQLGTGG-DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
           +  +  G VYA GGN  GQLG G  D  +T  +++     + +  K +S GA  +A + +
Sbjct: 138 LVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTI--KQLSAGANTSAALTE 195

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAV 474
           DGK+F WG N  GQ+GL D  +  IP +VT+ G     ++CG++H+  + +
Sbjct: 196 DGKLFMWGDNSEGQIGLEDKSNVCIPHEVTV-GKPISWISCGYYHSAFVTM 245



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 139/298 (46%), Gaps = 45/298 (15%)

Query: 213 CLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR-----IRMVSSPHP 267
           C+  L P  ++   A G  HTL  +D G V+  G   EGQLGLG          +    P
Sbjct: 118 CIKALKPE-KVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTP 176

Query: 268 IPCIES-SYGKDRSAALSRGSV------NSEG------------PGFRVPGNYVKGIACG 308
              I+  S G + SAAL+          NSEG            P     G  +  I+CG
Sbjct: 177 ADTIKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISWISCG 236

Query: 309 GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVS--SLLGI--QIEGVAAGLWHT 364
             HSA +T  G L TFG    G+ G     +EL  N  S   +LGI  ++  VA G  HT
Sbjct: 237 YYHSAFVTMDGELYTFGEPENGKLG---LPNELLMNHRSPQRVLGIPERVIQVACGGGHT 293

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAET-LPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
           + ++ +  VYAFG  QFGQLG G    ET  P++++   +++     +SCG  HTA++ +
Sbjct: 294 VVLT-EKVVYAFGLGQFGQLGLGTFLFETSEPKIIE--RIKDQKICHISCGENHTALMTE 350

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC------VPRNVACGWWHTLLLAVP 475
            G ++ +G  ++G+LGLG     N  +Q     C        + +ACG  H L+ A P
Sbjct: 351 LGLLYTFGDGRHGKLGLG---MENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVFATP 405



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 111/258 (43%), Gaps = 48/258 (18%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
           ++ G  HT  ++   +++ +G    GQLGLGS+  ++       CI++            
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKP----TCIKA------------ 121

Query: 286 GSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNC 345
                      +    VK  ACG  H+ V TD G +   G    GQ G G TDD  + + 
Sbjct: 122 -----------LKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQ 170

Query: 346 VSSLL-GIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLE 404
           +        I+ ++AG   +  ++ DG ++ +G N  GQ+G        +P         
Sbjct: 171 IVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIP--------- 221

Query: 405 NVHSKSV-------SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC 457
             H  +V       SCG  H+A +  DG+++ +G  + G+LGL + +  N  S   + G 
Sbjct: 222 --HEVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGI 279

Query: 458 VPR--NVACGWWHTLLLA 473
             R   VACG  HT++L 
Sbjct: 280 PERVIQVACGGGHTVVLT 297



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 83/198 (41%), Gaps = 56/198 (28%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
           R+  VA GG HT+ L++   V+ +G G  GQLGLG+ +   S P  I             
Sbjct: 282 RVIQVACGGGHTVVLTE-KVVYAFGLGQFGQLGLGTFLFETSEPKIIE------------ 328

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD--D 339
                         R+    +  I+CG  H+A++T+ G L TFG G +G+ G G  +  +
Sbjct: 329 --------------RIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTN 374

Query: 340 ELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL-- 397
           +  P   S+ L   ++ +A G  H +  ++                         PRL  
Sbjct: 375 QFFPTLCSNFLRFAVQLIACGGCHMLVFAT-------------------------PRLGT 409

Query: 398 LDAPSLENVHSKSVSCGA 415
           +D P  E+V+   +S G+
Sbjct: 410 IDEPKFEDVYEPYISTGS 427


>gi|391339113|ref|XP_003743897.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
            [Metaseiulus occidentalis]
          Length = 4496

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 123/252 (48%), Gaps = 34/252 (13%)

Query: 214  LVTLNP-GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIE 272
            L  L+P  ++   V +GGRH LAL+  G+V+ WG G +G+LG G++I             
Sbjct: 2731 LTDLSPYFIKKVAVHSGGRHALALTIDGRVFSWGEGEDGKLGHGNKI------------- 2777

Query: 273  SSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQC 332
             SY + +                 +    ++ +ACG  HSA +T +G L T+G G YG+ 
Sbjct: 2778 -SYDRPKLVE-------------SLKCKRIRDVACGSSHSAAVTSSGELYTWGSGEYGRL 2823

Query: 333  GQGSTDDELSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            G G    +L P  V +L   ++  VA G     T+ ++    VY++G   FG+LG GG  
Sbjct: 2824 GHGDNVPQLKPKQVRALSHERVVQVACGSRDAQTLALTERHWVYSWGDGDFGKLGKGGSD 2883

Query: 391  AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
              +LP+  +  +L +     V CGA+ +  ++ +GKV+ WG   Y +LG G   D ++  
Sbjct: 2884 GSSLPQ--NVETLNSQQVIQVECGAQFSLALSKNGKVWTWGKGDYFRLGHGS--DSHVRW 2939

Query: 451  QVTIEGCVPRNV 462
               +E    +NV
Sbjct: 2940 PQVVEELADKNV 2951



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 88/281 (31%), Positives = 129/281 (45%), Gaps = 35/281 (12%)

Query: 220  GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIE------- 272
             +R   +  G +   AL+  G+V+  GYG  G+         VS+P  I  ++       
Sbjct: 3651 ALRPVQIVGGEQTLFALTSDGKVYATGYGAGGR-LGIGGTESVSTPTLIETLQHVIVTQV 3709

Query: 273  --SSYGKDRSAALSRGSVNSEGPG-------------------FRVPGNYVKGIACGGRH 311
              +S GK   A  S G V S G G                     +   +V  +ACGG H
Sbjct: 3710 AVNSGGKHCLALTSSGDVFSWGEGDDGKLGHGSKALCERPKLIESLRDKHVVSVACGGAH 3769

Query: 312  SAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA--AGLWHTICISS 369
            SA IT +G L T+G G YG+ G G ++D+L P  V  L G  +  VA  +G   T+C+S 
Sbjct: 3770 SACITASGELYTWGKGRYGRLGHGDSEDQLKPKKVEELAGHNVLDVACGSGDAQTLCVSR 3829

Query: 370  DGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFC 429
            DG V+++G   +G+LG GG      P+ +D  SL+N     V CG++ +  +   G V+ 
Sbjct: 3830 DGLVWSWGDGDYGKLGRGGSDGCKFPQKID--SLQNAGVIKVECGSQFSVALTAAGVVYT 3887

Query: 430  WGWNKYGQLGLG--DVIDRNIPSQVTIEGCVPRNVACGWWH 468
            WG   Y +LG G  D + R    Q  ++G     VA G  H
Sbjct: 3888 WGKGDYHRLGHGSEDHVRRPQAVQGALQGKRVIQVAVGSLH 3928



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 83/289 (28%), Positives = 131/289 (45%), Gaps = 31/289 (10%)

Query: 212  PCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSR--------IRM 261
            P L+     V +  VA  +GG+H LAL+  G V+ WG G +G+LG GS+        I  
Sbjct: 3695 PTLIETLQHVIVTQVAVNSGGKHCLALTSSGDVFSWGEGDDGKLGHGSKALCERPKLIES 3754

Query: 262  VSSPHPI---------PCIESS-----YGKDRSAALSRGSVNSEGPGFRVP---GNYVKG 304
            +   H +          CI +S     +GK R   L  G    +    +V    G+ V  
Sbjct: 3755 LRDKHVVSVACGGAHSACITASGELYTWGKGRYGRLGHGDSEDQLKPKKVEELAGHNVLD 3814

Query: 305  IACGG--RHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
            +ACG     +  ++  G + ++G G YG+ G+G +D    P  + SL    +  V  G  
Sbjct: 3815 VACGSGDAQTLCVSRDGLVWSWGDGDYGKLGRGGSDGCKFPQKIDSLQNAGVIKVECGSQ 3874

Query: 363  HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIA 422
             ++ +++ G VY +G   + +LG G +     P+ +   +L+      V+ G+ H     
Sbjct: 3875 FSVALTAAGVVYTWGKGDYHRLGHGSEDHVRRPQAVQG-ALQGKRVIQVAVGSLHCVACT 3933

Query: 423  DDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTL 470
            D G+VF WG N  GQLG G       P  V +++G     VACG  HT+
Sbjct: 3934 DSGEVFTWGDNDEGQLGDGSTNAIQRPKLVASLKGKKMNRVACGSAHTV 3982



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 119/259 (45%), Gaps = 34/259 (13%)

Query: 220  GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
             ++   +A G +    +S  G+V+  G G  G+LGLG     V+ P P+  + S Y    
Sbjct: 2684 NLKPMNIAGGSKSLFIVSHDGKVFACGEGTNGRLGLGHS-HNVAQPKPLTDL-SPY---- 2737

Query: 280  SAALSRGSVNSEGPGFRVPGNYVKGIAC--GGRHSAVITDAGALLTFGWGLYGQCGQGST 337
                                 ++K +A   GGRH+  +T  G + ++G G  G+ G G+ 
Sbjct: 2738 ---------------------FIKKVAVHSGGRHALALTIDGRVFSWGEGEDGKLGHGNK 2776

Query: 338  DDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
                 P  V SL   +I  VA G  H+  ++S G++Y +G  ++G+LG G +  +  P+ 
Sbjct: 2777 ISYDRPKLVESLKCKRIRDVACGSSHSAAVTSSGELYTWGSGEYGRLGHGDNVPQLKPKQ 2836

Query: 398  LDAPSLENVHSKSVSCGAR--HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TI 454
            + A S E V    V+CG+R   T  + +   V+ WG   +G+LG G     ++P  V T+
Sbjct: 2837 VRALSHERV--VQVACGSRDAQTLALTERHWVYSWGDGDFGKLGKGGSDGSSLPQNVETL 2894

Query: 455  EGCVPRNVACGWWHTLLLA 473
                   V CG   +L L+
Sbjct: 2895 NSQQVIQVECGAQFSLALS 2913



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 113/441 (25%), Positives = 168/441 (38%), Gaps = 91/441 (20%)

Query: 1    MNGEGQEEKMERVVFMWGY--------LPGALPQRSPILSPLVVRL-PLTVGSAWRDVCG 51
            M      E +E  VF+WG         L G+   + P  S ++  L P+ +         
Sbjct: 2641 MGSPSMRENIECKVFVWGLNDKDQLGGLKGS-KIKEPKFSEVISNLKPMNIA-------- 2691

Query: 52   GGCGFAMAISDSRKLITWGSTDD----LGQSYVTSGKHGEIPEPFPL----PTEASIVKA 103
            GG      +S   K+   G   +    LG S+        + +P PL    P     V  
Sbjct: 2692 GGSKSLFIVSHDGKVFACGEGTNGRLGLGHSH-------NVAQPKPLTDLSPYFIKKVAV 2744

Query: 104  AAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRS 163
             +G  H +A+T  G V++WG  E        G L  G  +  D  +   S   +++   +
Sbjct: 2745 HSGGRHALALTIDGRVFSWGEGE-------DGKLGHGNKISYDRPKLVESLKCKRIRDVA 2797

Query: 164  Q-VSRSSGGTSSGTDGR-GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGV 221
               S S+  TSSG     GSGE G                  GD      P  V      
Sbjct: 2798 CGSSHSAAVTSSGELYTWGSGEYGRL--------------GHGDNVPQLKPKQVRALSHE 2843

Query: 222  RIATVAAGGR--HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD- 278
            R+  VA G R   TLAL++   V+ WG G  G+LG G                   G D 
Sbjct: 2844 RVVQVACGSRDAQTLALTERHWVYSWGDGDFGKLGKG-------------------GSDG 2884

Query: 279  RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
             S   +  ++NS+          V  + CG + S  ++  G + T+G G Y + G GS  
Sbjct: 2885 SSLPQNVETLNSQQ---------VIQVECGAQFSLALSKNGKVWTWGKGDYFRLGHGSDS 2935

Query: 339  DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
                P  V  L    +  V+ G  H I ++  G+VYA+G N  GQ G G       P ++
Sbjct: 2936 HVRWPQVVEELADKNVIQVSVGALHCIAVTDRGEVYAWGDNDHGQQGNGNTTVNRKPAIV 2995

Query: 399  DAPSLENVHSKSVSCGARHTA 419
                LE +   +V+CG+ H+ 
Sbjct: 2996 RG--LEAI--TNVACGSSHSV 3012



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 81/312 (25%), Positives = 121/312 (38%), Gaps = 52/312 (16%)

Query: 58   MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGG 117
            +A++ S  + +WG  DD G+    S    E P+      +  +V  A G AH   +T  G
Sbjct: 3719 LALTSSGDVFSWGEGDD-GKLGHGSKALCERPKLIESLRDKHVVSVACGGAHSACITASG 3777

Query: 118  EVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTD 177
            E+YTWG       GR +G L  G   D+   ++        V   +  S  +       D
Sbjct: 3778 ELYTWG------KGR-YGRLGHGDSEDQLKPKKVEELAGHNVLDVACGSGDAQTLCVSRD 3830

Query: 178  GR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHT 233
            G     G G+ G   R              G  +   FP  +       +  V  G + +
Sbjct: 3831 GLVWSWGDGDYGKLGR--------------GGSDGCKFPQKIDSLQNAGVIKVECGSQFS 3876

Query: 234  LALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGP 293
            +AL+  G V+ WG G   +LG GS    V  P  +                +G++     
Sbjct: 3877 VALTAAGVVYTWGKGDYHRLGHGSE-DHVRRPQAV----------------QGALQ---- 3915

Query: 294  GFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ 353
                 G  V  +A G  H    TD+G + T+G    GQ G GST+    P  V+SL G +
Sbjct: 3916 -----GKRVIQVAVGSLHCVACTDSGEVFTWGDNDEGQLGDGSTNAIQRPKLVASLKGKK 3970

Query: 354  IEGVAAGLWHTI 365
            +  VA G  HT+
Sbjct: 3971 MNRVACGSAHTV 3982



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 68/152 (44%), Gaps = 7/152 (4%)

Query: 323  TFGWGL--YGQCG--QGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
             F WGL    Q G  +GS   E  P     +  ++   +A G      +S DG V+A G 
Sbjct: 2654 VFVWGLNDKDQLGGLKGSKIKE--PKFSEVISNLKPMNIAGGSKSLFIVSHDGKVFACGE 2711

Query: 379  NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
               G+LG G       P+ L   S   +   +V  G RH   +  DG+VF WG  + G+L
Sbjct: 2712 GTNGRLGLGHSHNVAQPKPLTDLSPYFIKKVAVHSGGRHALALTIDGRVFSWGEGEDGKL 2771

Query: 439  GLGDVIDRNIPSQVTIEGCVP-RNVACGWWHT 469
            G G+ I  + P  V    C   R+VACG  H+
Sbjct: 2772 GHGNKISYDRPKLVESLKCKRIRDVACGSSHS 2803



 Score = 45.4 bits (106), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 72/177 (40%), Gaps = 60/177 (33%)

Query: 344  NCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG-------------------------- 377
            + +++L  +QI G    L+    ++SDG VYA G                          
Sbjct: 3647 DALTALRPVQIVGGEQTLF---ALTSDGKVYATGYGAGGRLGIGGTESVSTPTLIETLQH 3703

Query: 378  ---------------------GNQF-------GQLGTGGDQAETLPRLLDAPSLENVHSK 409
                                 G+ F       G+LG G       P+L++  SL + H  
Sbjct: 3704 VIVTQVAVNSGGKHCLALTSSGDVFSWGEGDDGKLGHGSKALCERPKLIE--SLRDKHVV 3761

Query: 410  SVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
            SV+CG  H+A I   G+++ WG  +YG+LG GD  D+  P +V  + G    +VACG
Sbjct: 3762 SVACGGAHSACITASGELYTWGKGRYGRLGHGDSEDQLKPKKVEELAGHNVLDVACG 3818


>gi|402909868|ref|XP_003917626.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Papio
           anubis]
          Length = 225

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 94/169 (55%), Gaps = 2/169 (1%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           ++CG  H+AV+T    L  FG   +GQ G GS      P CV +L   +++  A G  HT
Sbjct: 40  LSCGDEHTAVVTGNNKLYVFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHT 99

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           +  +  G+VYA GGN+ GQLG G  +      ++   + E+   K +S G+  +A + +D
Sbjct: 100 LVSTEGGNVYATGGNEEGQLGLGDTEERNTFHVISFFTSEH-KIKQLSAGSNTSAALTED 158

Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           G++F WG N  GQ+GL +V +  +P QVTI   V   ++CG++H+  + 
Sbjct: 159 GRLFMWGDNSEGQIGLKNVTNVCVPHQVTIGKPVSW-ISCGYYHSAFVT 206



 Score = 46.6 bits (109), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 47/200 (23%), Positives = 85/200 (42%), Gaps = 36/200 (18%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
           ++ G  HT  ++   +++ +G    GQLGLGS+   +S P    C+++            
Sbjct: 40  LSCGDEHTAVVTGNNKLYVFGSNNWGQLGLGSK-SAISKP---TCVKA------------ 83

Query: 286 GSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNC 345
                      +    VK  ACG  H+ V T+ G +   G    GQ G G T++  + + 
Sbjct: 84  -----------LKPEKVKLAACGRNHTLVSTEGGNVYATGGNEEGQLGLGDTEERNTFHV 132

Query: 346 VSSLLG-IQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPR--LLDAPS 402
           +S      +I+ ++AG   +  ++ DG ++ +G N  GQ+G        +P    +  P 
Sbjct: 133 ISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVTNVCVPHQVTIGKP- 191

Query: 403 LENVHSKSVSCGARHTAVIA 422
                   +SCG  H+A + 
Sbjct: 192 -----VSWISCGYYHSAFVT 206



 Score = 41.6 bits (96), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 54/130 (41%), Gaps = 29/130 (22%)

Query: 213 CLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR--------IRMVSS 264
           C+  L P  ++   A G  HTL  ++ G V+  G   EGQLGLG          I   +S
Sbjct: 80  CVKALKPE-KVKLAACGRNHTLVSTEGGNVYATGGNEEGQLGLGDTEERNTFHVISFFTS 138

Query: 265 PHPIPCIESSYGKDRSAALSRGSV------NSEG------------PGFRVPGNYVKGIA 306
            H I  +  S G + SAAL+          NSEG            P     G  V  I+
Sbjct: 139 EHKIKQL--SAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVTNVCVPHQVTIGKPVSWIS 196

Query: 307 CGGRHSAVIT 316
           CG  HSA +T
Sbjct: 197 CGYYHSAFVT 206


>gi|255562792|ref|XP_002522401.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223538286|gb|EEF39893.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1042

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 61/171 (35%), Positives = 93/171 (54%), Gaps = 4/171 (2%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V  IACGGRH+ ++T  G + ++G    G+ G G   D  +P  + +L G+ IE VA G 
Sbjct: 300 VHYIACGGRHAVLVTKPGEIFSWGEESGGRLGHGIKADVPNPKLIDTLAGMNIELVACGE 359

Query: 362 WHTICISSDGDVYAFGGNQF--GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            HT  ++  GD+Y +G   +  G LG G + +  +P+ +    +E +H   VSCG  HTA
Sbjct: 360 NHTCAVTFSGDLYTWGDGAYNCGLLGHGSEASHWIPKRIGG-DMEGIHVSYVSCGPWHTA 418

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
            +   G++F +G   +G LG GD     +P +V T+ G     V+CG WHT
Sbjct: 419 AVTSVGQLFTFGDGTFGALGHGDHSSATVPREVETLRGLRTIRVSCGVWHT 469



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 79/280 (28%), Positives = 121/280 (43%), Gaps = 48/280 (17%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGE--GQLGLGSRIRMVSSPHPIP 269
           P L+    G+ I  VA G  HT A++  G ++ WG G    G LG GS      + H IP
Sbjct: 341 PKLIDTLAGMNIELVACGENHTCAVTFSGDLYTWGDGAYNCGLLGHGS-----EASHWIP 395

Query: 270 CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
                                +  G  + G +V  ++CG  H+A +T  G L TFG G +
Sbjct: 396 ---------------------KRIGGDMEGIHVSYVSCGPWHTAAVTSVGQLFTFGDGTF 434

Query: 330 GQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT---ICISSD------------GDVY 374
           G  G G       P  V +L G++   V+ G+WHT   + I+++            G ++
Sbjct: 435 GALGHGDHSSATVPREVETLRGLRTIRVSCGVWHTAAAVEITTESSSPGGSGSSTFGKLF 494

Query: 375 AFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNK 434
            +G     +LG G  +    P  + A   EN+    V+CG   T  +   G+V+  G   
Sbjct: 495 TWGNGDEYRLGHGDKEPRLFPECVVALGDENI--CQVACGHNLTLALTAAGRVYTMGSTS 552

Query: 435 YGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLL 472
           YGQLG      + +P+ V   I G +   +ACG +H  +L
Sbjct: 553 YGQLGNPRATGK-VPAIVEGKIAGKIIEEIACGSYHVAVL 591



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 76/271 (28%), Positives = 119/271 (43%), Gaps = 45/271 (16%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G+ ++ V+ G  HT A++ +GQ++ +G G  G LG G                     D 
Sbjct: 404 GIHVSYVSCGPWHTAAVTSVGQLFTFGDGTFGALGHG---------------------DH 442

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDA---------------GALLTF 324
           S+A    +V  E    R  G     ++CG  H+A   +                G L T+
Sbjct: 443 SSA----TVPREVETLR--GLRTIRVSCGVWHTAAAVEITTESSSPGGSGSSTFGKLFTW 496

Query: 325 GWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQL 384
           G G   + G G  +  L P CV +L    I  VA G   T+ +++ G VY  G   +GQL
Sbjct: 497 GNGDEYRLGHGDKEPRLFPECVVALGDENICQVACGHNLTLALTAAGRVYTMGSTSYGQL 556

Query: 385 GTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVI 444
           G      + +P +++      +  + ++CG+ H AV+    +V+ WG    GQLG GD  
Sbjct: 557 GNPRATGK-VPAIVEGKIAGKI-IEEIACGSYHVAVLTSKAEVYTWGKGTNGQLGHGDNK 614

Query: 445 DRNIPSQVT-IEGCVPRNVACGWWHTLLLAV 474
           DRN P+ V  +     R VACG   T ++ +
Sbjct: 615 DRNQPTVVDFLRDKQVRAVACGSNFTAIICL 645



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 76/187 (40%), Gaps = 36/187 (19%)

Query: 204 GDENLSAFP-CLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMV 262
           GD+    FP C+V L     I  VA G   TLAL+  G+V+  G    GQLG        
Sbjct: 507 GDKEPRLFPECVVALG-DENICQVACGHNLTLALTAAGRVYTMGSTSYGQLG-------- 557

Query: 263 SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL 322
                     +     +  A+  G         ++ G  ++ IACG  H AV+T    + 
Sbjct: 558 ----------NPRATGKVPAIVEG---------KIAGKIIEEIACGSYHVAVLTSKAEVY 598

Query: 323 TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT--ICI-----SSDGDVYA 375
           T+G G  GQ G G   D   P  V  L   Q+  VA G   T  IC+     S+D  V +
Sbjct: 599 TWGKGTNGQLGHGDNKDRNQPTVVDFLRDKQVRAVACGSNFTAIICLHKWVSSADHSVCS 658

Query: 376 FGGNQFG 382
              N FG
Sbjct: 659 GCHNPFG 665


>gi|55730398|emb|CAH91921.1| hypothetical protein [Pongo abelii]
          Length = 527

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/176 (36%), Positives = 102/176 (57%), Gaps = 7/176 (3%)

Query: 303 KGIAC----GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS-LLGIQIEGV 357
           K IAC     G H  + T  G + T+G   Y Q G G+T+  L P  +S+ L   Q+  V
Sbjct: 74  KKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV 133

Query: 358 AAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARH 417
           A G +H++ ++SDG+V+A+G N  GQ+G+G    + +PR +    L+N    +++CG   
Sbjct: 134 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTG-CLQNKVVVTIACGQMC 192

Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
              + D G+V+ WG+N  GQLGLG+  ++  P +V  ++G   + VACG+ HTL+L
Sbjct: 193 CMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 248



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 121/244 (49%), Gaps = 31/244 (12%)

Query: 214 LVTLNPGVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIE 272
           L +LN G +IA ++ G G H +  +  G+V+ WG+    QLG G+     ++   +PC  
Sbjct: 68  LDSLN-GKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT-----TNHGLVPCHI 121

Query: 273 SSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQC 332
           S+                      +    V  +ACG  HS V+T  G +  +G+   GQ 
Sbjct: 122 ST---------------------NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQV 160

Query: 333 GQGSTDDELSPNCVSSLLGIQIE-GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
           G GST ++  P  V+  L  ++   +A G    + +   G+VY +G N  GQLG G    
Sbjct: 161 GSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGN 220

Query: 392 ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
           +  P      +L+ +  + V+CG  HT V+ D+G+V+ WG N YGQLG G+  +++ P+ 
Sbjct: 221 QPTP--CRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 278

Query: 452 VTIE 455
           VT+E
Sbjct: 279 VTVE 282



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 109/231 (47%), Gaps = 30/231 (12%)

Query: 203 SGDENLSAFPCLVTLN-PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +G  N    PC ++ N    ++  VA G  H+L L+  G+V+ WGY   GQ+G GS +  
Sbjct: 109 NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVN- 167

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
                PIP         R     +  V             V  IACG      + D G +
Sbjct: 168 ----QPIP--------RRVTGCLQNKV-------------VVTIACGQMCCMAVVDTGEV 202

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             +G+   GQ G G++ ++ +P  V++L GI+++ VA G  HT+ ++ +G VYA+G N +
Sbjct: 203 YVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSY 262

Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           GQLGTG    ++ P  +       +  +  +C + HT A     G V+ WG
Sbjct: 263 GQLGTGNKSNQSYPTPVTVEKDRII--EIAACHSTHTSAAKTQGGHVYMWG 311



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 23/115 (20%)

Query: 370 DGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR----HTAVIADDG 425
           + +++  G N  G LG G  ++   PR LD+     ++ K ++C +     H  +   +G
Sbjct: 40  NDEIFVLGTNCCGCLGLGDVRSTIEPRRLDS-----LNGKKIACLSYGSGPHIVLATTEG 94

Query: 426 KVFCWGWNKYGQLGLGDV--------IDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           +VF WG N Y QLG G          I  N+ ++  IE      VACG +H+L+L
Sbjct: 95  EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIE------VACGSYHSLVL 143



 Score = 39.7 bits (91), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 55/133 (41%), Gaps = 17/133 (12%)

Query: 14  VFMWGYL-PGALPQRSPILSPLVVRLP--LTVGSAWRDVCGGGCGFAMAISDSRKLITWG 70
           VF WGY   G +   S +  P+  R+   L         CG  C   MA+ D+ ++  WG
Sbjct: 149 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMC--CMAVVDTGEVYVWG 206

Query: 71  STDDLGQSYVTSGKHGEIPEPFPLPTEASI--VKAAAGWAHCVAVTEGGEVYTWGWKECV 128
                G   +  G  G  P P  +     I   + A G+AH + +T+ G+VY WG     
Sbjct: 207 YN---GNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG----- 258

Query: 129 PSGRVFGDLSTGT 141
                +G L TG 
Sbjct: 259 --ANSYGQLGTGN 269


>gi|345324538|ref|XP_003430830.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ornithorhynchus
           anatinus]
          Length = 3053

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 81/266 (30%), Positives = 127/266 (47%), Gaps = 30/266 (11%)

Query: 212 PCLVTLNPGVRIATVAA--GGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP 269
           P LV       I  VAA   G H LAL+  G+V+ WG G  G+LG G  + +   P  I 
Sbjct: 189 PQLVQGLASRNIVKVAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPL-EEPKMIS 247

Query: 270 CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
            +                           G +V  IACG  +SA IT  G L T+G G Y
Sbjct: 248 ALSGKQA----------------------GKHVVHIACGSTYSAAITAEGELYTWGRGNY 285

Query: 330 GQCGQGSTDDELSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTG 387
           G+ G GS++D+  P  V+ L G+++  V+  +G   T+ ++ +G V+++G   +G+LG G
Sbjct: 286 GRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 345

Query: 388 GDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
           G      P+L++   L+++    V CG++ +  +  DG+V+ WG     +LG G      
Sbjct: 346 GSDGCKTPKLIE--KLQDLDIVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVR 403

Query: 448 IPSQVT-IEGCVPRNVACGWWHTLLL 472
            P  +  ++G    +VA G  H L L
Sbjct: 404 YPKLLEGLQGKKVVDVAAGSTHCLAL 429



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 111/223 (49%), Gaps = 31/223 (13%)

Query: 218  NPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
            N  V+   V +GGRH +AL+  G+V+ WG G +G+LG  SR+     P  I  +++   +
Sbjct: 1234 NYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIR 1292

Query: 278  DRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST 337
            D                          IACG  HSA IT +G L T+G G YG+ G G  
Sbjct: 1293 D--------------------------IACGSSHSAAITSSGELYTWGLGEYGRLGHGDN 1326

Query: 338  DDELSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLP 395
              +L P  V  LLG ++  VA G     T+ ++ +G V+++G   FG+LG GG +   +P
Sbjct: 1327 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVP 1386

Query: 396  RLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
            + ++  + + V    + CGA+ +  +   G V+ WG   +G+L
Sbjct: 1387 QNIERLNGQGVC--QIECGAQFSLALTKSGVVWTWGRGDFGEL 1427



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 145/365 (39%), Gaps = 82/365 (22%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V   +G  HC+A++  GEVY+WG  E         D   G G ++   +R    + E + 
Sbjct: 2261 VAVNSGGKHCLALSSEGEVYSWGEAE---------DGKLGHG-NRSPCDRPR--VVESLR 2308

Query: 161  PRSQVSRSSGGTSSG-TDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
                V  ++GG  S      G      K R   L          GD      P LV    
Sbjct: 2309 GIEVVDIAAGGAHSACITVAGDLYSWGKGRYGRLGH--------GDSEDQLKPKLVEALQ 2360

Query: 220  GVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
            G R+  +A  +G   TL L+D   VW WG G  G+LG G                   G 
Sbjct: 2361 GYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-------------------GS 2401

Query: 278  DRSAALSRGSVNSEGPGFRVP-------GNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
            D               G +VP       G  V  + CG + S  +T +GA+ T+G G Y 
Sbjct: 2402 D---------------GCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 2446

Query: 331  QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            + G GS D    P  V  L G ++  +A G  H +C + DG+VY +G N  GQLG G   
Sbjct: 2447 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTN 2506

Query: 391  AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
            A   PRL+ A  L+      V+CG+ HT           W  +K    G        +P+
Sbjct: 2507 AIQRPRLVAA--LQGKKINRVACGSAHT---------LAWSTSKPANAG-------KLPT 2548

Query: 451  QVTIE 455
            QV +E
Sbjct: 2549 QVPME 2553



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/277 (26%), Positives = 128/277 (46%), Gaps = 46/277 (16%)

Query: 233  TLALSDIGQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAALSRG---- 286
            TL+    G ++GWG+   GQLG   G+++++     P PC   +    R   L  G    
Sbjct: 2164 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKV-----PTPC--EALATLRPVQLIGGEQTL 2216

Query: 287  -SVNSEGPGF-------------------------RVPGNYVKGIAC--GGRHSAVITDA 318
             +V ++G  +                          +   +VK +A   GG+H   ++  
Sbjct: 2217 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFVKKVAVNSGGKHCLALSSE 2276

Query: 319  GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            G + ++G    G+ G G+      P  V SL GI++  +AAG  H+ CI+  GD+Y++G 
Sbjct: 2277 GEVYSWGEAEDGKLGHGNRSPCDRPRVVESLRGIEVVDIAAGGAHSACITVAGDLYSWGK 2336

Query: 379  NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGA--RHTAVIADDGKVFCWGWNKYG 436
             ++G+LG G  + +  P+L++A  L+      ++CG+    T  + DD  V+ WG   YG
Sbjct: 2337 GRYGRLGHGDSEDQLKPKLVEA--LQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYG 2394

Query: 437  QLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLL 472
            +LG G      +P ++ ++ G     V CG   ++ L
Sbjct: 2395 KLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 2431



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 124/285 (43%), Gaps = 48/285 (16%)

Query: 205  DENLSAFPCLVT---------LNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG- 254
            DE+L+A P L +          N G  I   A+G      +    +V+ WG   + QLG 
Sbjct: 1107 DEDLAAVPFLASDNEEEDDEKANAGSLIRKKASGLESAATIRT--KVFVWGLNDKDQLGG 1164

Query: 255  -LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSA 313
              GS+I++            S+ +  SA                  N V+ +A G +   
Sbjct: 1165 LKGSKIKV-----------PSFSETLSAL-----------------NVVQ-VAGGSKSLF 1195

Query: 314  VITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVA--AGLWHTICISSD 370
             +T  G +   G    G+ G G +   +  P  +++L    ++ VA  +G  H + ++ D
Sbjct: 1196 AVTVEGKVYACGEATNGRLGLGISSGTVPLPRQITALSNYVVKKVAVHSGGRHAMALTVD 1255

Query: 371  GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
            G V+++G    G+LG         PRL++A  L+    + ++CG+ H+A I   G+++ W
Sbjct: 1256 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEA--LKTKRIRDIACGSSHSAAITSSGELYTW 1313

Query: 431  GWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACGWWHTLLLAV 474
            G  +YG+LG GD   +  P  V +  G     VACG      LA+
Sbjct: 1314 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 1358



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 94/221 (42%), Gaps = 46/221 (20%)

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
           SS D+ +   P LVT   G+++  V+  +G   TLA+++ GQVW WG G  G+LG G   
Sbjct: 292 SSEDQTI---PMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRG--- 345

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITD 317
                                     GS   + P    ++    +  + CG + S  +T 
Sbjct: 346 --------------------------GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTK 379

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
            G + ++G G   + G G+ +    P  +  L G ++  VAAG  H + ++ D +V+++G
Sbjct: 380 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVHSWG 439

Query: 378 GN----QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
            N     F  L     Q   L      P L+  H   ++CG
Sbjct: 440 SNDQCQHFDTLRITKPQPSAL------PGLDTKHIVGIACG 474



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 107/452 (23%), Positives = 178/452 (39%), Gaps = 87/452 (19%)

Query: 55   GFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVT 114
            G   A +   K+  WG  +D  Q     G   ++P      +  ++V+ A G     AVT
Sbjct: 1140 GLESAATIRTKVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT 1198

Query: 115  EGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSS 174
              G+VY  G      +GR+   +S+GT        RQ + L+  V  +  V+  SGG  +
Sbjct: 1199 VEGKVYACGE---ATNGRLGLGISSGTV----PLPRQITALSNYVVKK--VAVHSGGRHA 1249

Query: 175  ---GTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVA 227
                 DG+    G G++G         K    S  + D+     P L+      RI  +A
Sbjct: 1250 MALTVDGKVFSWGEGDDG---------KLGHFSRMNCDK-----PRLIEALKTKRIRDIA 1295

Query: 228  AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGS 287
             G  H+ A++  G+++ WG G  G+LG G                     D +  L    
Sbjct: 1296 CGSSHSAAITSSGELYTWGLGEYGRLGHG---------------------DNTTQLKPKM 1334

Query: 288  VNSEGPGFRVPGNYVKGIACGGR--HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNC 345
            V        + G+ V  +ACG R   +  +TD G + ++G G +G+ G+G ++    P  
Sbjct: 1335 VKV------LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQN 1388

Query: 346  VSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQL---------GTGGDQAETLPR 396
            +  L G  +  +  G   ++ ++  G V+ +G   FG+L         G   D+     +
Sbjct: 1389 IERLNGQGVCQIECGAQFSLALTKSGVVWTWGRGDFGELRPDSHIVQSGNVSDRMRVRNK 1448

Query: 397  ---LLDAPSLENVHSKSVS---CGARHTAVIAD-----------DGKVFCWGWNKYGQLG 439
               L+  P    V  + +     G    + I+              +V+ WG N +GQ G
Sbjct: 1449 GACLIPLPFFGLVSPREMGWEIVGIERNSGISSFCGQQGERRERQLEVYAWGDNDHGQQG 1508

Query: 440  LGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
             G       P+ V  +EG     VACG  H++
Sbjct: 1509 NGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 1540



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 96/358 (26%), Positives = 141/358 (39%), Gaps = 58/358 (16%)

Query: 24   LPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSG 83
            LP++   LS  VV+  + V S  R         AMA++   K+ +WG  DD G+    S 
Sbjct: 1225 LPRQITALSNYVVK-KVAVHSGGR--------HAMALTVDGKVFSWGEGDD-GKLGHFSR 1274

Query: 84   KHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGL 143
             + + P          I   A G +H  A+T  GE+YTWG  E    GR  G     T L
Sbjct: 1275 MNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGE---YGR-LGHGDNTTQL 1330

Query: 144  DKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGR-GSGEEGSKRRRISLAKQTAESSS 202
               + +        QV+  S+ +++   T  G     G G+ G   R             
Sbjct: 1331 KPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR------------- 1377

Query: 203  SGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMV 262
             G E  +    +  LN G  +  +  G + +LAL+  G VW WG G  G+L   S I   
Sbjct: 1378 GGSEGCNVPQNIERLN-GQGVCQIECGAQFSLALTKSGVVWTWGRGDFGELRPDSHI--- 1433

Query: 263  SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF-----RVPGNYVKGIACGGRHSAVITD 317
                    ++S    DR    ++G+     P F     R  G  + GI    R+S + + 
Sbjct: 1434 --------VQSGNVSDRMRVRNKGACLIPLPFFGLVSPREMGWEIVGIE---RNSGISSF 1482

Query: 318  AGA--------LLTFGWGL--YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTI 365
             G         L  + WG   +GQ G G+T     P  V  L G +I  VA G  H++
Sbjct: 1483 CGQQGERRERQLEVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 1540



 Score = 42.4 bits (98), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 3/78 (3%)

Query: 48  DVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAA 105
           D+    CG  F++A++   ++ +WG  D+    + T  +H   P+         +V  AA
Sbjct: 363 DIVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVVDVAA 421

Query: 106 GWAHCVAVTEGGEVYTWG 123
           G  HC+A+TE  EV++WG
Sbjct: 422 GSTHCLALTEDSEVHSWG 439



 Score = 41.2 bits (95), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 5/73 (6%)

Query: 53   GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
            G  F++A++ S  + TWG  D   LG     S  H   P          ++  A G  HC
Sbjct: 2424 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRRPRQVQGLQGKKVIAIATGSLHC 2480

Query: 111  VAVTEGGEVYTWG 123
            V  TE GEVYTWG
Sbjct: 2481 VCCTEDGEVYTWG 2493


>gi|118345495|ref|XP_976578.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila]
 gi|89287995|gb|EAR85983.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila SB210]
          Length = 722

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 112/467 (23%), Positives = 196/467 (41%), Gaps = 89/467 (19%)

Query: 19  YLPGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGST--DDLG 76
           Y+   +   + + +P ++     + +  + VCG    +A  I  + ++  WG      LG
Sbjct: 7   YVNNQVKSVNKVQTPHLIS---DISNIVKIVCGANHSYA--IDTNFEVYAWGCNLGRKLG 61

Query: 77  QS--YVTSGKHGEIPEPFPLPTEAS------IVKAAAGWAHCVA-VTEGGEVYTWGWKEC 127
            S  Y       +IPE   +P + +      I   + G  H  A  TE  +VY WG  E 
Sbjct: 62  LSDEYYNQIFQADIPEQIKIPVKVTELSNKKINNISTGTNHSFAWSTELNQVYCWGIGEY 121

Query: 128 VPSG----------RVFGDLSTGTGLDKDVFE-----RQSSFLTEQVSPRSQVSRSS--- 169
              G           +F  L    G+  ++ E       +  + +Q++  +  S++    
Sbjct: 122 GKLGNKESKDLQYPEIFNGLKQPEGIQWEISEISCGENHTVAVIKQINVNNSQSQNKLYV 181

Query: 170 -GGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAA 228
            G +S    G  +G+     + + ++    E +                     + +V A
Sbjct: 182 WGSSSDWQLGIDTGKTDYVNQPLEMSPDYWEGN---------------------VESVKA 220

Query: 229 GGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSV 288
               T+A+   G+++ WG GG  +LG  + I  V+  HP+  IES         LS+  +
Sbjct: 221 CSDFTIAIDKQGRIFSWGKGGFNRLGYKAEI--VNQKHPLQ-IES---------LSKQQI 268

Query: 289 NSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS 348
                            + G  HSA IT+ G L T+G    GQ G G    ++ P  V +
Sbjct: 269 --------------IQFSLGSFHSAAITNNGRLYTWGRDSNGQLGHGQAKADIFPKEVQA 314

Query: 349 LLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL-PRLLDAPSLENVH 407
           L    I  VA G  HT+ +S + +++++G N  GQLG   +  ++  P+ +     E+  
Sbjct: 315 LQNTYIVSVACGEGHTLALSKNNELFSWGLNSSGQLGRASENLKSSDPKKISF--FEDKS 372

Query: 408 SKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI 454
            K ++CG++H+ V+  DG V+ WG N+YGQLG     D++  +Q TI
Sbjct: 373 IKQIACGSKHSLVLLQDGTVYSWGSNQYGQLGF----DQDSNAQNTI 415


>gi|426375449|ref|XP_004054551.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 2
           [Gorilla gorilla gorilla]
          Length = 527

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/203 (34%), Positives = 110/203 (54%), Gaps = 7/203 (3%)

Query: 276 GKDRSAALSRGSVNSEGPGFRVPGNYVKGIAC----GGRHSAVITDAGALLTFGWGLYGQ 331
           G +    L  G V S     R+     K IAC     G H  + T  G + T+G   Y Q
Sbjct: 47  GTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQ 106

Query: 332 CGQGSTDDELSPNCVSS-LLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            G G+T+  L P  +S+ L   Q+  VA G +H++ ++SDG+V+A+G N  GQ+G+G   
Sbjct: 107 LGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTV 166

Query: 391 AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
            + +PR +    L+N    +++CG      + D G+V+ WG+N  GQLGLG+  ++  P 
Sbjct: 167 NQPIPRRVTG-CLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPC 225

Query: 451 QVT-IEGCVPRNVACGWWHTLLL 472
           +V  ++G   + VACG+ HTL+L
Sbjct: 226 RVAALQGIRVQRVACGYAHTLVL 248



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 121/244 (49%), Gaps = 31/244 (12%)

Query: 214 LVTLNPGVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIE 272
           L +LN G +IA ++ G G H +  +  G+V+ WG+    QLG G+     ++   +PC  
Sbjct: 68  LDSLN-GKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT-----TNHGLVPCHI 121

Query: 273 SSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQC 332
           S+                      +    V  +ACG  HS V+T  G +  +G+   GQ 
Sbjct: 122 ST---------------------NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQV 160

Query: 333 GQGSTDDELSPNCVSSLLGIQIE-GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
           G GST ++  P  V+  L  ++   +A G    + +   G+VY +G N  GQLG G    
Sbjct: 161 GSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGN 220

Query: 392 ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
           +  P      +L+ +  + V+CG  HT V+ D+G+V+ WG N YGQLG G+  +++ P+ 
Sbjct: 221 QPTP--CRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 278

Query: 452 VTIE 455
           VT+E
Sbjct: 279 VTVE 282



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 109/231 (47%), Gaps = 30/231 (12%)

Query: 203 SGDENLSAFPCLVTLN-PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +G  N    PC ++ N    ++  VA G  H+L L+  G+V+ WGY   GQ+G GS +  
Sbjct: 109 NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVN- 167

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
                PIP         R     +  V             V  IACG      + D G +
Sbjct: 168 ----QPIP--------RRVTGCLQNKV-------------VVTIACGQMCCMAVVDTGEV 202

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             +G+   GQ G G++ ++ +P  V++L GI+++ VA G  HT+ ++ +G VYA+G N +
Sbjct: 203 YVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSY 262

Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           GQLGTG    ++ P  +       +  +  +C + HT A     G V+ WG
Sbjct: 263 GQLGTGNKSNQSYPTPVTVEKDRII--EIAACHSTHTSAAKTQGGHVYMWG 311



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 56/115 (48%), Gaps = 23/115 (20%)

Query: 370 DGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR----HTAVIADDG 425
           + +++  G N  G LG G  Q+   PR LD+     ++ K ++C +     H  +   +G
Sbjct: 40  NDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS-----LNGKKIACLSYGSGPHIVLATTEG 94

Query: 426 KVFCWGWNKYGQLGLGDV--------IDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           +VF WG N Y QLG G          I  N+ ++  IE      VACG +H+L+L
Sbjct: 95  EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIE------VACGSYHSLVL 143



 Score = 39.7 bits (91), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 55/133 (41%), Gaps = 17/133 (12%)

Query: 14  VFMWGYL-PGALPQRSPILSPLVVRLP--LTVGSAWRDVCGGGCGFAMAISDSRKLITWG 70
           VF WGY   G +   S +  P+  R+   L         CG  C   MA+ D+ ++  WG
Sbjct: 149 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMC--CMAVVDTGEVYVWG 206

Query: 71  STDDLGQSYVTSGKHGEIPEPFPLPTEASI--VKAAAGWAHCVAVTEGGEVYTWGWKECV 128
                G   +  G  G  P P  +     I   + A G+AH + +T+ G+VY WG     
Sbjct: 207 YN---GNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG----- 258

Query: 129 PSGRVFGDLSTGT 141
                +G L TG 
Sbjct: 259 --ANSYGQLGTGN 269


>gi|390353202|ref|XP_789385.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Strongylocentrotus purpuratus]
          Length = 1070

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 115/242 (47%), Gaps = 39/242 (16%)

Query: 242 VWGWGYGGEGQLG---LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVP 298
           V+ WG   +GQLG   LG  +  +SSP  +P +                           
Sbjct: 3   VFSWGCTQDGQLGISGLGDDVPSLSSPREVPAL--------------------------A 36

Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
           G  ++ I+CG RH+ V+   G ++  G    GQ GQ     EL+   V +   + I  V+
Sbjct: 37  GKQIREISCGLRHTCVLLRDGTVMMCGANDRGQLGQDRPGSELAH--VPATETLVITQVS 94

Query: 359 AGLWHTICISSDGDVYAFGGNQFGQ--LGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR 416
            G  HT+ ++  G V  +G N  GQ  L TG  + +  PR L   SL +     V+CG+ 
Sbjct: 95  CGNDHTLAVTDRGQVLGWGRNDRGQCGLSTGDSEDKRKPRFLK--SLSSCQVAQVACGSM 152

Query: 417 HTAVIADDGKVFCWGWNKYGQLGL---GDVIDRNIPSQVTIEGCVP-RNVACGWWHTLLL 472
           H+  +  DG++F WG N +GQLG+   G  + R+ P Q++    VP R +ACG WH+  L
Sbjct: 153 HSMALTRDGRIFAWGDNSFGQLGIGAPGRTLYRDHPQQLSSLPGVPIRRLACGGWHSFAL 212

Query: 473 AV 474
           +V
Sbjct: 213 SV 214



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 82/261 (31%), Positives = 121/261 (46%), Gaps = 39/261 (14%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G +I  ++ G RHT  L   G V   G    GQLG   + R  S    +P  E+      
Sbjct: 37  GKQIREISCGLRHTCVLLRDGTVMMCGANDRGQLG---QDRPGSELAHVPATETL----- 88

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCG--QGST 337
                                 +  ++CG  H+  +TD G +L +G    GQCG   G +
Sbjct: 89  ---------------------VITQVSCGNDHTLAVTDRGQVLGWGRNDRGQCGLSTGDS 127

Query: 338 DDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
           +D+  P  + SL   Q+  VA G  H++ ++ DG ++A+G N FGQLG G     TL R 
Sbjct: 128 EDKRKPRFLKSLSSCQVAQVACGSMHSMALTRDGRIFAWGDNSFGQLGIGAP-GRTLYR- 185

Query: 398 LDAP----SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV- 452
            D P    SL  V  + ++CG  H+  ++  G VF WG N  GQLGLG   DR  P+ + 
Sbjct: 186 -DHPQQLSSLPGVPIRRLACGGWHSFALSVSGAVFGWGKNNCGQLGLGTTEDRVSPTPLK 244

Query: 453 TIEGCVPRNVACGWWHTLLLA 473
            ++    + +ACG  +T +L 
Sbjct: 245 NLKTKQVKYIACGQNYTAILT 265



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/267 (30%), Positives = 125/267 (46%), Gaps = 39/267 (14%)

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           S+GD      P  +      ++A VA G  H++AL+  G+++ WG    GQLG+G+  R 
Sbjct: 123 STGDSEDKRKPRFLKSLSSCQVAQVACGSMHSMALTRDGRIFAWGDNSFGQLGIGAPGRT 182

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
           +   HP               LS            +PG  ++ +ACGG HS  ++ +GA+
Sbjct: 183 LYRDHP-------------QQLSS-----------LPGVPIRRLACGGWHSFALSVSGAV 218

Query: 322 LTFGWGLY--GQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN 379
             FGWG    GQ G G+T+D +SP  + +L   Q++ +A G  +T  +++ G ++ FG  
Sbjct: 219 --FGWGKNNCGQLGLGTTEDRVSPTPLKNLKTKQVKYIACGQNYTAILTASGGLFLFGQG 276

Query: 380 QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIA-DDGKVFCWGWNKYGQL 438
             GQLG G    E  PR +            V+CG +HT V+    G+ F  G    GQL
Sbjct: 277 SEGQLGHGSHSNEVNPRSVQG--FLGSEITQVACGRQHTLVLEGRTGRFFSLGQGSKGQL 334

Query: 439 GLGDVIDRNIPSQV--------TIEGC 457
           GL +   ++  S V        + EGC
Sbjct: 335 GLDNDSSKSCASPVPGPWEAPSSTEGC 361



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 92/297 (30%), Positives = 134/297 (45%), Gaps = 46/297 (15%)

Query: 100 IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQV 159
           I + + G  H +AVT+ G+V  WG  +    G     LSTG   DK    R+  FL    
Sbjct: 90  ITQVSCGNDHTLAVTDRGQVLGWGRNDRGQCG-----LSTGDSEDK----RKPRFLKSLS 140

Query: 160 SPR-SQVSRSSGGTSSGT-DGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTL 217
           S + +QV+  S  + + T DGR      +   ++ +            + LS+ P     
Sbjct: 141 SCQVAQVACGSMHSMALTRDGRIFAWGDNSFGQLGIGAPGRTLYRDHPQQLSSLP----- 195

Query: 218 NPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
             GV I  +A GG H+ ALS  G V+GWG    GQLGLG+    V SP P+  +++    
Sbjct: 196 --GVPIRRLACGGWHSFALSVSGAVFGWGKNNCGQLGLGTTEDRV-SPTPLKNLKT---- 248

Query: 278 DRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST 337
                                   VK IACG  ++A++T +G L  FG G  GQ G GS 
Sbjct: 249 ----------------------KQVKYIACGQNYTAILTASGGLFLFGQGSEGQLGHGSH 286

Query: 338 DDELSPNCVSSLLGIQIEGVAAGLWHTICIS-SDGDVYAFGGNQFGQLGTGGDQAET 393
            +E++P  V   LG +I  VA G  HT+ +    G  ++ G    GQLG   D +++
Sbjct: 287 SNEVNPRSVQGFLGSEITQVACGRQHTLVLEGRTGRFFSLGQGSKGQLGLDNDSSKS 343



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 113/451 (25%), Positives = 164/451 (36%), Gaps = 84/451 (18%)

Query: 53  GCGFAMAISDSRKLITWG--STDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
           G   +MA++   ++  WG  S   LG        + + P+         I + A G  H 
Sbjct: 150 GSMHSMALTRDGRIFAWGDNSFGQLGIGAPGRTLYRDHPQQLSSLPGVPIRRLACGGWHS 209

Query: 111 VAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRS--QVSRS 168
            A++  G V+ WG   C       G L  GT  D+       +  T+QV   +  Q   +
Sbjct: 210 FALSVSGAVFGWGKNNC-------GQLGLGTTEDRVSPTPLKNLKTKQVKYIACGQNYTA 262

Query: 169 SGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAA 228
               S G    G G EG          Q    S S + N    P  V    G  I  VA 
Sbjct: 263 ILTASGGLFLFGQGSEG----------QLGHGSHSNEVN----PRSVQGFLGSEITQVAC 308

Query: 229 GGRHTLALS-DIGQVWGWGYGGEGQLGL-GSRIRMVSSPHPIP----------------- 269
           G +HTL L    G+ +  G G +GQLGL     +  +SP P P                 
Sbjct: 309 GRQHTLVLEGRTGRFFSLGQGSKGQLGLDNDSSKSCASPVPGPWEAPSSTEGCSNGEESR 368

Query: 270 -CIESSY-GKDRSAAL-SRGSVNSEGPGFRV--------------------------PGN 300
             I S + G D+S  + SRG+       FR                           P  
Sbjct: 369 SIIGSIFAGGDQSFCIVSRGNDPDHPLDFREAIPSIEPVVLTKDLLQEVSESSPLLEPSK 428

Query: 301 YVKGI-------ACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ 353
            V+ +       AC      V   +G L  FG G  GQ G GS  +E++P  V   LG +
Sbjct: 429 AVQTLEMALSSPACLNASFLVGAGSGGLFLFGQGSEGQLGHGSHSNEVNPRSVKDFLGNE 488

Query: 354 IEGVAAGLWHTICIS-SDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVS 412
           I  VA G  HT+ +    G  Y+ G    GQLG     +++   L+  P      ++  S
Sbjct: 489 ITQVACGRQHTLVLEGRTGGFYSLGQGSKGQLGLDNGSSKSCASLVPGPWEAPSSTEGCS 548

Query: 413 CGARHTAVIADDGKVFCWGWNKYGQLGLGDV 443
            G    ++I   G +F  G   +  +  G++
Sbjct: 549 NGEESRSII---GSIFAGGDQSFCIVSRGNI 576


>gi|281349737|gb|EFB25321.1| hypothetical protein PANDA_007753 [Ailuropoda melanoleuca]
          Length = 527

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 103/176 (58%), Gaps = 7/176 (3%)

Query: 303 KGIAC----GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS-LLGIQIEGV 357
           K IAC     G H  + T  G + T+G   Y Q G G+T+  L P  +S+ L   Q+  V
Sbjct: 74  KKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEV 133

Query: 358 AAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARH 417
           A G +H++ ++SDG+V+A+G N  GQ+G+G    + +PR +    L+N  + +++CG   
Sbjct: 134 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTG-CLQNKVAVNIACGQMC 192

Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
           +  + + G+V+ WG+N  GQLGLG   ++  P ++  ++G   + VACG+ HTL+L
Sbjct: 193 SMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVL 248



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 119/238 (50%), Gaps = 30/238 (12%)

Query: 220 GVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
           G +IA ++ G G H +  +  G+V+ WG+    QLG G+     ++   +PC  S+    
Sbjct: 73  GKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT-----TNHGLVPCHIST---- 123

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
                             +    V  +ACG  HS V+T  G +  +G+   GQ G GST 
Sbjct: 124 -----------------NLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTA 166

Query: 339 DELSPNCVSSLLGIQIE-GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
           ++  P  V+  L  ++   +A G   ++ + + G+VY +G N  GQLG G    +  P  
Sbjct: 167 NQPIPRRVTGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCR 226

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
           + A  L+ +  + V+CG  HT V+ D+G+V+ WG N YGQLG G+  +++ P+ V +E
Sbjct: 227 IAA--LQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPVIVE 282



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/233 (29%), Positives = 115/233 (49%), Gaps = 34/233 (14%)

Query: 203 SGDENLSAFPCLVTLN-PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +G  N    PC ++ N    ++  VA G  H+L L+  G+V+ WGY   GQ+G GS    
Sbjct: 109 NGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---- 164

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
            ++  PIP   +   +++ A                       IACG   S  + + G +
Sbjct: 165 -TANQPIPRRVTGCLQNKVAV---------------------NIACGQMCSMAVVNTGEV 202

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             +G+   GQ G GS+ ++ +P  +++L GI+++ VA G  HT+ ++ +G VYA+G N +
Sbjct: 203 YVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSY 262

Query: 382 GQLGTGGDQAETLPRLLDAPSL--ENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           GQLGTG    ++ P    AP +  ++   +  +C + HT A     G V+ WG
Sbjct: 263 GQLGTGNKSNQSYP----APVIVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 92/224 (41%), Gaps = 42/224 (18%)

Query: 65  KLITWG--STDDLGQSYVTSGKHGEIPEPFPLP-TEASIVKAAAGWAHCVAVTEGGEVYT 121
           ++ TWG  +   LG     +  HG +P       +   + + A G  H + +T  GEV+ 
Sbjct: 95  EVFTWGHNAYSQLGNG---TTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFA 151

Query: 122 WGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDG--- 178
           WG+          G + +G+  ++ +  R +  L  +V+      +        T     
Sbjct: 152 WGYNNS-------GQVGSGSTANQPIPRRVTGCLQNKVAVNIACGQMCSMAVVNTGEVYV 204

Query: 179 ---RGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLA 235
               G+G+ G                SSG++     PC +    G+R+  VA G  HTL 
Sbjct: 205 WGYNGNGQLG--------------LGSSGNQ---PTPCRIAALQGIRVQRVACGYAHTLV 247

Query: 236 LSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           L+D GQV+ WG    GQLG G++    +  +P P I     KDR
Sbjct: 248 LTDEGQVYAWGANSYGQLGTGNK---SNQSYPAPVIVE---KDR 285



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 3/105 (2%)

Query: 370 DGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFC 429
           + +++  G N  G LG G  Q+   PR LD+ S + +   S   G  H  +   +G+VF 
Sbjct: 40  NDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGP-HIVLATTEGEVFT 98

Query: 430 WGWNKYGQLGLGDVIDRNIPSQVT--IEGCVPRNVACGWWHTLLL 472
           WG N Y QLG G      +P  ++  +       VACG +H+L+L
Sbjct: 99  WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVL 143



 Score = 38.9 bits (89), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 56/133 (42%), Gaps = 17/133 (12%)

Query: 14  VFMWGYL-PGALPQRSPILSPLVVRLP--LTVGSAWRDVCGGGCGFAMAISDSRKLITWG 70
           VF WGY   G +   S    P+  R+   L    A    CG  C  +MA+ ++ ++  WG
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVAVNIACGQMC--SMAVVNTGEVYVWG 206

Query: 71  STDDLGQSYVTSGKHGEIPEPFPLPTEASI--VKAAAGWAHCVAVTEGGEVYTWGWKECV 128
                G   +  G  G  P P  +     I   + A G+AH + +T+ G+VY WG     
Sbjct: 207 YN---GNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWG----- 258

Query: 129 PSGRVFGDLSTGT 141
                +G L TG 
Sbjct: 259 --ANSYGQLGTGN 269


>gi|218779101|ref|YP_002430419.1| chromosome condensation regulator RCC1 [Desulfatibacillum
           alkenivorans AK-01]
 gi|218760485|gb|ACL02951.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
           alkenivorans AK-01]
          Length = 671

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 120/254 (47%), Gaps = 35/254 (13%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G  +  +AAG + +L L   G VW WG      LGLG R+   ++P  +  + ++     
Sbjct: 126 GNAVPMLAAGTQFSLGLKTDGTVWSWGCNTYATLGLGDRVDR-NTPQKVEALSNAVA--- 181

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDD 339
                                    +A G  H+  +T  G++ ++GW   GQ G GS  +
Sbjct: 182 -------------------------LAAGDDHTLALTRDGSVWSWGWNYNGQLGLGSIHE 216

Query: 340 ELSPNCVSSLLGI-QIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           +   +    +  I  +  +AA  +HT  ++ DG+V+++G N FGQLG G       P+ +
Sbjct: 217 DTYESTPKKVEAISNVTAIAAQTYHTQALTRDGNVWSWGSNDFGQLGMGDQNDRDAPQKV 276

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCV 458
           +A  L NV   +++ G  H+  +  DG+V+ WG N  GQLGLGD+ DR+ P +V     V
Sbjct: 277 EA--LSNV--VAINAGGNHSLAVTRDGQVWAWGENSEGQLGLGDLWDRDAPQKVEALSNV 332

Query: 459 PRNVACGWWHTLLL 472
              +  G  HTL L
Sbjct: 333 VA-INAGGDHTLAL 345



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 128/264 (48%), Gaps = 24/264 (9%)

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI-- 259
           ++GD+NL      V L+    + ++A G +H+LA+S  G VW WG    GQLG+ S    
Sbjct: 24  ATGDQNLP-----VQLSYLSNVVSLAGGEKHSLAVSGDGSVWSWGSNSAGQLGVESLTPA 78

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSE--------GPGFRVPGNYVKGIACGGRH 311
            +++  H +   +  +    +     G +  +         PG    GN V  +A G + 
Sbjct: 79  SVLAPVHALYSGDDFHLFYDTDGDGTGDICDDCPYDPFKTAPGLSGCGNAVPMLAAGTQF 138

Query: 312 SAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDG 371
           S  +   G + ++G   Y   G G   D  +P  V +L       +AAG  HT+ ++ DG
Sbjct: 139 SLGLKTDGTVWSWGCNTYATLGLGDRVDRNTPQKVEAL--SNAVALAAGDDHTLALTRDG 196

Query: 372 DVYAFGGNQFGQLGTGG---DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVF 428
            V+++G N  GQLG G    D  E+ P+ ++A S    +  +++    HT  +  DG V+
Sbjct: 197 SVWSWGWNYNGQLGLGSIHEDTYESTPKKVEAIS----NVTAIAAQTYHTQALTRDGNVW 252

Query: 429 CWGWNKYGQLGLGDVIDRNIPSQV 452
            WG N +GQLG+GD  DR+ P +V
Sbjct: 253 SWGSNDFGQLGMGDQNDRDAPQKV 276



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 103/219 (47%), Gaps = 36/219 (16%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS--RIRMVSSPHPIPCIESSYGKDRSAAL 283
           +AAG  HTLAL+  G VW WG+   GQLGLGS       S+P  +  I +          
Sbjct: 182 LAAGDDHTLALTRDGSVWSWGWNYNGQLGLGSIHEDTYESTPKKVEAISN---------- 231

Query: 284 SRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                             V  IA    H+  +T  G + ++G   +GQ G G  +D  +P
Sbjct: 232 ------------------VTAIAAQTYHTQALTRDGNVWSWGSNDFGQLGMGDQNDRDAP 273

Query: 344 NCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSL 403
             V +L    +  + AG  H++ ++ DG V+A+G N  GQLG G       P+ ++A  L
Sbjct: 274 QKVEAL--SNVVAINAGGNHSLAVTRDGQVWAWGENSEGQLGLGDLWDRDAPQKVEA--L 329

Query: 404 ENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGD 442
            NV   +++ G  HT  +  DG V+ WG N  GQ+G G+
Sbjct: 330 SNV--VAINAGGDHTLALTRDGSVWAWGKNGRGQIGTGE 366



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 109/248 (43%), Gaps = 43/248 (17%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEA--SIVKAAAGWAHC 110
           G  F++ +     + +WG       +Y T G    +    P   EA  + V  AAG  H 
Sbjct: 135 GTQFSLGLKTDGTVWSWGCN-----TYATLGLGDRVDRNTPQKVEALSNAVALAAGDDHT 189

Query: 111 VAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSG 170
           +A+T  G V++WGW          G L  G+ + +D +E     + E +S  + ++  + 
Sbjct: 190 LALTRDGSVWSWGWN-------YNGQLGLGS-IHEDTYESTPKKV-EAISNVTAIAAQTY 240

Query: 171 GTSSGT-DGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIAT 225
            T + T DG     GS + G    ++ +  Q    +    E LS             +  
Sbjct: 241 HTQALTRDGNVWSWGSNDFG----QLGMGDQNDRDAPQKVEALS------------NVVA 284

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES----SYGKDRSA 281
           + AGG H+LA++  GQVW WG   EGQLGLG  +    +P  +  + +    + G D + 
Sbjct: 285 INAGGNHSLAVTRDGQVWAWGENSEGQLGLGD-LWDRDAPQKVEALSNVVAINAGGDHTL 343

Query: 282 ALSR-GSV 288
           AL+R GSV
Sbjct: 344 ALTRDGSV 351



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 84/195 (43%), Gaps = 40/195 (20%)

Query: 314 VITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDV 373
            +T  GAL T+G    G+ G G+T D+  P  +S L    +  +A G  H++ +S DG V
Sbjct: 2   AVTQGGALWTWGGNDDGRLGIGATGDQNLPVQLSYL--SNVVSLAGGEKHSLAVSGDGSV 59

Query: 374 YAFGGNQFGQLGT-------------------------------GGDQAETLPR--LLDA 400
           +++G N  GQLG                                 GD  +  P      A
Sbjct: 60  WSWGSNSAGQLGVESLTPASVLAPVHALYSGDDFHLFYDTDGDGTGDICDDCPYDPFKTA 119

Query: 401 PSLENVHSK--SVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGC 457
           P L    +    ++ G + +  +  DG V+ WG N Y  LGLGD +DRN P +V  +   
Sbjct: 120 PGLSGCGNAVPMLAAGTQFSLGLKTDGTVWSWGCNTYATLGLGDRVDRNTPQKVEALSNA 179

Query: 458 VPRNVACGWWHTLLL 472
           V   +A G  HTL L
Sbjct: 180 VA--LAAGDDHTLAL 192



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 82/201 (40%), Gaps = 40/201 (19%)

Query: 85  HGEIPEPFPLPTEA--SIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTG 142
           H +  E  P   EA  ++   AA   H  A+T  G V++WG  +       FG L  G  
Sbjct: 215 HEDTYESTPKKVEAISNVTAIAAQTYHTQALTRDGNVWSWGSND-------FGQLGMGDQ 267

Query: 143 LDKDVFERQSSFLTEQVSPRSQVSRSSGGTSS---GTDGR----GSGEEGSKRRRISLAK 195
            D+D  ++  +         + V+ ++GG  S     DG+    G   EG    ++ L  
Sbjct: 268 NDRDAPQKVEAL-------SNVVAINAGGNHSLAVTRDGQVWAWGENSEG----QLGLGD 316

Query: 196 QTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGL 255
                +    E LS             +  + AGG HTLAL+  G VW WG  G GQ+G 
Sbjct: 317 LWDRDAPQKVEALS------------NVVAINAGGDHTLALTRDGSVWAWGKNGRGQIGT 364

Query: 256 GSRIRMVSSP-HPIPCIESSY 275
           G    + + P H I   E+ Y
Sbjct: 365 GEGQSLYNEPVHVIYSDENFY 385



 Score = 42.0 bits (97), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 4/76 (5%)

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           + ++  G ++ +GGN  G+LG G    + LP  L    L NV   S++ G +H+  ++ D
Sbjct: 1   MAVTQGGALWTWGGNDDGRLGIGATGDQNLPVQL--SYLSNV--VSLAGGEKHSLAVSGD 56

Query: 425 GKVFCWGWNKYGQLGL 440
           G V+ WG N  GQLG+
Sbjct: 57  GSVWSWGSNSAGQLGV 72


>gi|410947368|ref|XP_003980421.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Felis catus]
          Length = 551

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 103/176 (58%), Gaps = 7/176 (3%)

Query: 303 KGIAC----GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS-LLGIQIEGV 357
           K IAC     G H  + T  G + T+G   Y Q G G+T+  L P  +S+ L   Q+  V
Sbjct: 98  KKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLMPCHISTNLSNKQVTEV 157

Query: 358 AAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARH 417
           A G +H++ ++SDG+V+A+G N  GQ+G+G    + +PR +    L+N    +++CG   
Sbjct: 158 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTG-CLQNKVVVNIACGQMC 216

Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
           +  + + G+V+ WG+N  GQLGLG   ++  P +++ ++G   + VACG+ HTL+L
Sbjct: 217 SMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRISALQGIRVQRVACGYAHTLVL 272



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 124/253 (49%), Gaps = 31/253 (12%)

Query: 220 GVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
           G +IA ++ G G H +  +  G+V+ WG+    QLG G+     ++   +PC  S+    
Sbjct: 97  GKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT-----TNHGLMPCHIST---- 147

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
                             +    V  +ACG  HS V+T  G +  +G+   GQ G GST 
Sbjct: 148 -----------------NLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTA 190

Query: 339 DELSPNCVSSLLGIQIE-GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
           ++  P  V+  L  ++   +A G   ++ + + G+VY +G N  GQLG G    +  P  
Sbjct: 191 NQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCR 250

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE-G 456
           + A  L+ +  + V+CG  HT V+ D+G+V+ WG N YGQLG G+  +++ P+ V +E  
Sbjct: 251 ISA--LQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPVVVEKD 308

Query: 457 CVPRNVACGWWHT 469
            +    AC   HT
Sbjct: 309 RIIEIAACHLAHT 321



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 113/233 (48%), Gaps = 34/233 (14%)

Query: 203 SGDENLSAFPCLVTLN-PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +G  N    PC ++ N    ++  VA G  H+L L+  G+V+ WGY   GQ+G GS    
Sbjct: 133 NGTTNHGLMPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---- 188

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
            ++  PIP         R     +  V             V  IACG   S  + + G +
Sbjct: 189 -TANQPIP--------RRVTGCLQNKV-------------VVNIACGQMCSMAVVNTGEV 226

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             +G+   GQ G GS+ ++ +P  +S+L GI+++ VA G  HT+ ++ +G VYA+G N +
Sbjct: 227 YVWGYNGNGQLGLGSSGNQPTPCRISALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSY 286

Query: 382 GQLGTGGDQAETLPRLLDAPSL--ENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           GQLGTG    ++ P    AP +  ++   +  +C   HT A     G V+ WG
Sbjct: 287 GQLGTGNKSNQSYP----APVVVEKDRIIEIAACHLAHTSAAKTQGGHVYMWG 335



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 3/105 (2%)

Query: 370 DGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFC 429
           + +++  G N  G LG G  Q+   PR LD+ S + +   S   G  H  +   +G+VF 
Sbjct: 64  NDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGP-HIVLATTEGEVFT 122

Query: 430 WGWNKYGQLGLGDVIDRNIPSQVT--IEGCVPRNVACGWWHTLLL 472
           WG N Y QLG G      +P  ++  +       VACG +H+L+L
Sbjct: 123 WGHNAYSQLGNGTTNHGLMPCHISTNLSNKQVTEVACGSYHSLVL 167


>gi|296134345|ref|YP_003641592.1| Ig domain-containing protein group 2 domain-containing protein
            [Thermincola potens JR]
 gi|296032923|gb|ADG83691.1| Ig domain protein group 2 domain protein [Thermincola potens JR]
          Length = 4140

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 90/307 (29%), Positives = 138/307 (44%), Gaps = 53/307 (17%)

Query: 188  RRRISLAKQTAESSSSGDENLSAFPCLVTLN-PGVRIATVAAGGRHTLALSDIGQVWGWG 246
            + RI+L      S ++    +S F   +  N P    A V +G  ++LAL   G VW WG
Sbjct: 2413 KYRINLTT----SDTTVTPQISWFRMDIFANTPAFTAAAVYSGTGYSLALKPDGTVWAWG 2468

Query: 247  YGGEGQLGLGSR-IRMVSSPHPIPCIES---------------------SYGKDRSAALS 284
               +GQLG G + +    +P  +P +                       ++GK+ S  L 
Sbjct: 2469 INDQGQLGNGGQDLNPHKNPEQVPGLTGVTALAPGGYHVVALKNDGTVWTWGKNDSGQLG 2528

Query: 285  RGSVNSEGPGFRVPG-NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
             G+  S     +VPG   VK +A G  H+ V+   G +  +G  +YGQ G        SP
Sbjct: 2529 DGTYTSRFSPGQVPGLTGVKAVAAGANHTVVLKTDGTVWAWGNNMYGQLGT-------SP 2581

Query: 344  NCVSSLLG-IQIEGV------AAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPR 396
            + ++     +QI G+       AG+WHT+   +DG V+A+G N  GQ+G G   A     
Sbjct: 2582 SVLAKTYSPVQIPGIDSVVEIGAGIWHTLARRADGTVWAWGRNIEGQVGNGSASA----- 2636

Query: 397  LLDAPS----LENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
            ++D+P+    L  V    V+ G  H   +  DG V+ WG N  GQLG G+ +  N+P Q 
Sbjct: 2637 VVDSPAQVSGLTGV--TKVAAGGYHNLALRSDGTVWAWGRNDKGQLGTGNTVSSNVPVQT 2694

Query: 453  TIEGCVP 459
              +   P
Sbjct: 2695 RYDQAGP 2701



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 61/189 (32%), Positives = 84/189 (44%), Gaps = 14/189 (7%)

Query: 285  RGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD--DELS 342
            R  + +  P F     Y      G  +S  +   G +  +G    GQ G G  D     +
Sbjct: 2433 RMDIFANTPAFTAAAVY-----SGTGYSLALKPDGTVWAWGINDQGQLGNGGQDLNPHKN 2487

Query: 343  PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPS 402
            P  V  L G+    +A G +H + + +DG V+ +G N  GQLG G   +   P  +  P 
Sbjct: 2488 PEQVPGLTGVT--ALAPGGYHVVALKNDGTVWTWGKNDSGQLGDGTYTSRFSPGQV--PG 2543

Query: 403  LENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVP-RN 461
            L  V  K+V+ GA HT V+  DG V+ WG N YGQLG    +     S V I G      
Sbjct: 2544 LTGV--KAVAAGANHTVVLKTDGTVWAWGNNMYGQLGTSPSVLAKTYSPVQIPGIDSVVE 2601

Query: 462  VACGWWHTL 470
            +  G WHTL
Sbjct: 2602 IGAGIWHTL 2610



 Score = 47.4 bits (111), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 47/90 (52%), Gaps = 7/90 (7%)

Query: 357  VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLP-----RLLDAPSLENVHSKSV 411
            +AAG  H++ +  D  +  +G N  GQLG  G   E +P     R  D      V S  +
Sbjct: 1953 IAAGTDHSMAVRGDSALVGWGANDDGQLG-DGHFGEPVPYPVLVRNADGTPWNPVLS-GM 2010

Query: 412  SCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
            S G+ HTAV+  DG V+ WG N +GQLG G
Sbjct: 2011 SPGSTHTAVLGSDGSVWSWGNNAFGQLGNG 2040



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 5/88 (5%)

Query: 305  IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL-SPNCVSSLLGIQ----IEGVAA 359
            IA G  HS  +    AL+ +G    GQ G G   + +  P  V +  G      + G++ 
Sbjct: 1953 IAAGTDHSMAVRGDSALVGWGANDDGQLGDGHFGEPVPYPVLVRNADGTPWNPVLSGMSP 2012

Query: 360  GLWHTICISSDGDVYAFGGNQFGQLGTG 387
            G  HT  + SDG V+++G N FGQLG G
Sbjct: 2013 GSTHTAVLGSDGSVWSWGNNAFGQLGNG 2040


>gi|126330678|ref|XP_001365078.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Monodelphis
           domestica]
          Length = 1051

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 92/308 (29%), Positives = 139/308 (45%), Gaps = 51/308 (16%)

Query: 84  KHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGL 143
           + G  PE      +  I+  A G +H +A+++ G++++WG      +G   G L   T  
Sbjct: 71  REGNKPEQIGALADQHIIHVACGESHSLALSDQGQLFSWG------AGSD-GQLGHTTTE 123

Query: 144 DKDVFERQSSFLTEQVSPRSQVSRSSGG---TSSGTDGRGSGEEGSKRRRISLAKQTAES 200
           D     R    L ++++ +  +  S G     +   DG+      ++  ++ L K+    
Sbjct: 124 DSVAIPR----LIKKLNQQMILQVSCGNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQ 179

Query: 201 SSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR 260
           +S         P  V    G+ +A VAAGG H+ ALS  G V+GWG    GQLGL     
Sbjct: 180 AS---------PQRVKSLEGIPLAQVAAGGAHSFALSLSGAVFGWGRNNAGQLGLSDETD 230

Query: 261 MVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA 320
             S     PC            L R                V  I+CG  H+AV+T +G 
Sbjct: 231 RQS-----PC---------HVKLLR-------------TQKVVYISCGEEHTAVLTKSGG 263

Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFGGN 379
           + TFG G +GQ G  S +DE++P  V  L+G ++  +A G  HT+  + S G +YAFG  
Sbjct: 264 VFTFGAGSFGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 323

Query: 380 QFGQLGTG 387
             GQLGTG
Sbjct: 324 ARGQLGTG 331



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 119/255 (46%), Gaps = 38/255 (14%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  VA GG H++ L + G+V+  G   +GQLG     R  + P  I  +           
Sbjct: 37  IKEVACGGNHSIFLLEDGEVYTCGLNTKGQLG---HEREGNKPEQIGALAD--------- 84

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                             ++  +ACG  HS  ++D G L ++G G  GQ G  +T+D ++
Sbjct: 85  -----------------QHIIHVACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVA 127

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD-QAETLPRLLDA 400
            P  +  L    I  V+ G WH + +++DG  + +G N+ GQLG G +  ++  P+    
Sbjct: 128 IPRLIKKLNQQMILQVSCGNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQASPQ--RV 185

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI---EGC 457
            SLE +    V+ G  H+  ++  G VF WG N  GQLGL D  DR  P  V +   +  
Sbjct: 186 KSLEGIPLAQVAAGGAHSFALSLSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKV 245

Query: 458 VPRNVACGWWHTLLL 472
           V   ++CG  HT +L
Sbjct: 246 V--YISCGEEHTAVL 258



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 80/261 (30%), Positives = 113/261 (43%), Gaps = 34/261 (13%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES-------- 273
            I  VA G  H+LALSD GQ++ WG G +GQLG  +    V+ P  I  +          
Sbjct: 86  HIIHVACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQQMILQVSC 145

Query: 274 ---------------SYGKDRSAALSRGS-VNSEGPGFRVP---GNYVKGIACGGRHSAV 314
                          ++G++R   L  G    S+    RV    G  +  +A GG HS  
Sbjct: 146 GNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGIPLAQVAAGGAHSFA 205

Query: 315 ITDAGALLTFGWGLY--GQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGD 372
           ++ +GA+  FGWG    GQ G     D  SP  V  L   ++  ++ G  HT  ++  G 
Sbjct: 206 LSLSGAV--FGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 263

Query: 373 VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           V+ FG   FGQLG      E  PR      L       ++CG +HT A +   G ++ +G
Sbjct: 264 VFTFGAGSFGQLGHDSMNDEVNPR--RVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 321

Query: 432 WNKYGQLGLGDVIDRNIPSQV 452
               GQLG G   +   PS V
Sbjct: 322 CGARGQLGTGHTCNVKCPSPV 342



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/180 (32%), Positives = 92/180 (51%), Gaps = 15/180 (8%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           +K +ACGG HS  + + G + T G    GQ G     ++  P  + +L    I  VA G 
Sbjct: 37  IKEVACGGNHSIFLLEDGEVYTCGLNTKGQLGHEREGNK--PEQIGALADQHIIHVACGE 94

Query: 362 WHTICISSDGDVYAFGGNQFGQLG-TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            H++ +S  G ++++G    GQLG T  + +  +PRL+   + + +    VSCG  H   
Sbjct: 95  SHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQQMI--LQVSCGNWHCMA 152

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV------TIEGCVPRNVACGWWHTLLLAV 474
           +A DG+ F WG N++GQLGLG    +  PSQ       ++EG     VA G  H+  L++
Sbjct: 153 LAADGQFFTWGQNRHGQLGLG----KEFPSQASPQRVKSLEGIPLAQVAAGGAHSFALSL 208



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 98/399 (24%), Positives = 155/399 (38%), Gaps = 81/399 (20%)

Query: 39  PLTVGS-AWRDVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLP 95
           P  +G+ A + +    CG   ++A+SD  +L +WG+  D    + T+     IP      
Sbjct: 76  PEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKL 135

Query: 96  TEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFL 155
            +  I++ + G  HC+A+   G+ +TWG           G L    GL K+         
Sbjct: 136 NQQMILQVSCGNWHCMALAADGQFFTWGQNR-------HGQL----GLGKE--------F 176

Query: 156 TEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLA-------KQTAESSSSGDENL 208
             Q SP  Q  +S  G        G    G+    +SL+       +  A      DE  
Sbjct: 177 PSQASP--QRVKSLEGIPLAQVAAG----GAHSFALSLSGAVFGWGRNNAGQLGLSDETD 230

Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
              PC V L    ++  ++ G  HT  L+  G V+ +G G  GQLG  S   M    +P 
Sbjct: 231 RQSPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSFGQLGHDS---MNDEVNPR 287

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHS-AVITDAGALLTFGWG 327
             +E                        + G+ V  IACG +H+ A +  +G +  FG G
Sbjct: 288 RVLE------------------------LMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 323

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLG 385
             GQ G G T +   P+ V             G W  H   +SS  D  +F  +    + 
Sbjct: 324 ARGQLGTGHTCNVKCPSPVK------------GHWAAHNGQLSSRAD--SFKYHIVKHIF 369

Query: 386 TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           +GGDQ   L    +  S  +     +   A++T++I D+
Sbjct: 370 SGGDQTFVLCSKYENSSPAD--DFRIMNQAQYTSLINDE 406


>gi|339234781|ref|XP_003378945.1| putative HECT-domain protein [Trichinella spiralis]
 gi|316978479|gb|EFV61464.1| putative HECT-domain protein [Trichinella spiralis]
          Length = 994

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 122/254 (48%), Gaps = 31/254 (12%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G+ + +VA G  H +AL++ G ++ WG    GQLG+  R+ +V+        ++ Y + +
Sbjct: 111 GIHVISVACGDAHCVALTNDGHLFSWGSNVYGQLGV-ERMNVVA--------KARYPRIQ 161

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGST 337
              L+                 +  IACG  HS  +     +L   WGL  +GQ G G+ 
Sbjct: 162 EINLAN----------------IVQIACGSNHSLALESTDGVLH-AWGLNDHGQLGIGTR 204

Query: 338 DDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
           +  + P  V+ L+GI I  +AAG  H++ ++  G V+ +G N FGQ+G    +    P L
Sbjct: 205 ESFIGPTTVNKLMGIPICQLAAGASHSLVLTPSGTVFGWGKNMFGQIGQNEQRDILYPSL 264

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEG 456
           +     + V    ++CG   +  +   G +F +G   YGQLG G+      P QV  + G
Sbjct: 265 VKLLRTQKV--IRLACGEDFSVAVTATGGLFTFGAGTYGQLGHGNQNSELFPKQVMELMG 322

Query: 457 CVPRNVACGWWHTL 470
            V  +VACG  HTL
Sbjct: 323 SVVLDVACGRCHTL 336



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 87/295 (29%), Positives = 128/295 (43%), Gaps = 62/295 (21%)

Query: 100 IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDK-DVFERQSSFLTEQ 158
           ++  A G AHCVA+T  G +++WG         V+G L    G+++ +V  +      ++
Sbjct: 114 VISVACGDAHCVALTNDGHLFSWG-------SNVYGQL----GVERMNVVAKARYPRIQE 162

Query: 159 VSPRSQVSRSSGGTSS----GTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSA 210
           ++  + V  + G   S     TDG     G  + G       L   T ES          
Sbjct: 163 INLANIVQIACGSNHSLALESTDGVLHAWGLNDHGQ------LGIGTRESFIG------- 209

Query: 211 FPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPC 270
            P  V    G+ I  +AAG  H+L L+  G V+GWG    GQ+G   + R +  P  +  
Sbjct: 210 -PTTVNKLMGIPICQLAAGASHSLVLTPSGTVFGWGKNMFGQIGQNEQ-RDILYPSLVKL 267

Query: 271 IESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
           +       R+  + R                   +ACG   S  +T  G L TFG G YG
Sbjct: 268 L-------RTQKVIR-------------------LACGEDFSVAVTATGGLFTFGAGTYG 301

Query: 331 QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLG 385
           Q G G+ + EL P  V  L+G  +  VA G  HT+ I ++  +YAFG N  GQLG
Sbjct: 302 QLGHGNQNSELFPKQVMELMGSVVLDVACGRCHTLAI-TENKLYAFGLNTSGQLG 355



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 75/151 (49%), Gaps = 13/151 (8%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSL----------LG 351
           ++ IACG  HS ++ D G++ + G   + Q G      +  PN   +L          +G
Sbjct: 54  IRQIACGRHHSVMLLDDGSVFSCGNNDFYQLGHDGIKRK--PNLYENLHWYIDVKQSFVG 111

Query: 352 IQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSV 411
           I +  VA G  H + +++DG ++++G N +GQLG          R      +   +   +
Sbjct: 112 IHVISVACGDAHCVALTNDGHLFSWGSNVYGQLGVERMNVVAKARYPRIQEINLANIVQI 171

Query: 412 SCGARHT-AVIADDGKVFCWGWNKYGQLGLG 441
           +CG+ H+ A+ + DG +  WG N +GQLG+G
Sbjct: 172 ACGSNHSLALESTDGVLHAWGLNDHGQLGIG 202



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/130 (33%), Positives = 62/130 (47%), Gaps = 9/130 (6%)

Query: 352 IQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGG-----DQAETLPRLLDAP-SLEN 405
           ++I  +A G  H++ +  DG V++ G N F QLG  G     +  E L   +D   S   
Sbjct: 52  LKIRQIACGRHHSVMLLDDGSVFSCGNNDFYQLGHDGIKRKPNLYENLHWYIDVKQSFVG 111

Query: 406 VHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG---LGDVIDRNIPSQVTIEGCVPRNV 462
           +H  SV+CG  H   + +DG +F WG N YGQLG   +  V     P    I       +
Sbjct: 112 IHVISVACGDAHCVALTNDGHLFSWGSNVYGQLGVERMNVVAKARYPRIQEINLANIVQI 171

Query: 463 ACGWWHTLLL 472
           ACG  H+L L
Sbjct: 172 ACGSNHSLAL 181



 Score = 44.3 bits (103), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 87/231 (37%), Gaps = 44/231 (19%)

Query: 50  CGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEI----PEPFPLPTEAS------ 99
           CG     A+  +D   L  WG  D           HG++     E F  PT  +      
Sbjct: 173 CGSNHSLALESTDG-VLHAWGLND-----------HGQLGIGTRESFIGPTTVNKLMGIP 220

Query: 100 IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDV-FERQSSFLTEQ 158
           I + AAG +H + +T  G V+ WG         +FG +  G    +D+ +      L  Q
Sbjct: 221 ICQLAAGASHSLVLTPSGTVFGWG-------KNMFGQI--GQNEQRDILYPSLVKLLRTQ 271

Query: 159 VSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLN 218
              R           + T G  +   G           T      G++N   FP  V   
Sbjct: 272 KVIRLACGEDFSVAVTATGGLFTFGAG-----------TYGQLGHGNQNSELFPKQVMEL 320

Query: 219 PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP 269
            G  +  VA G  HTLA+++  +++ +G    GQLGL +     S P PIP
Sbjct: 321 MGSVVLDVACGRCHTLAITE-NKLYAFGLNTSGQLGLLNVKHTTSIPLPIP 370


>gi|297791865|ref|XP_002863817.1| hypothetical protein ARALYDRAFT_917597 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309652|gb|EFH40076.1| hypothetical protein ARALYDRAFT_917597 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1083

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 108/397 (27%), Positives = 165/397 (41%), Gaps = 71/397 (17%)

Query: 88  IPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDV 147
           IP+P        +   A G  H   V+  GEV+TWG       G   G   TG  L + +
Sbjct: 267 IPKPLESNVVLDVHHIACGVRHAALVSRQGEVFTWGEASGGRLGHGMGKDVTGPQLIESL 326

Query: 148 ------FERQSSFLTEQVSPRSQVSRSSGGT-SSGTDGRGSGEEGSKRRRISLAKQTAES 200
                 F     F T  V+   ++     GT ++G  G G+       +RIS   +    
Sbjct: 327 AATSVDFVACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLE---- 382

Query: 201 SSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR 260
                              G++IA+V+ G  HT  ++  GQ++ +G G  G LG G +  
Sbjct: 383 -------------------GLQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHGDK-E 422

Query: 261 MVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITD--- 317
            V  P  +  +                      G R        +ACG  H+A I +   
Sbjct: 423 TVFYPREVESLS---------------------GLRTIA-----VACGVWHAAAIVEVIV 456

Query: 318 --------AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISS 369
                   +G L T+G G   + G G  +  L P CVS+L+      VA G   T+ +++
Sbjct: 457 TQSTSSISSGKLFTWGDGDKSRLGHGDKESRLKPTCVSALIDHTFHRVACGHSLTVGLTT 516

Query: 370 DGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFC 429
            G VY  G   +GQLG      + LP L++   +++   + ++CGA H AV+    +VF 
Sbjct: 517 SGKVYTMGSTVYGQLGNPNADGK-LPCLVEDKLIKDC-VEEIACGAYHVAVLTSRNEVFT 574

Query: 430 WGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
           WG    G+LG GD+ DR  PS V T++    +N+ACG
Sbjct: 575 WGKGANGRLGHGDIEDRKAPSLVDTLKERHVKNIACG 611



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 61/170 (35%), Positives = 91/170 (53%), Gaps = 4/170 (2%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V  IACG RH+A+++  G + T+G    G+ G G   D   P  + SL    ++ VA G 
Sbjct: 279 VHHIACGVRHAALVSRQGEVFTWGEASGGRLGHGMGKDVTGPQLIESLAATSVDFVACGE 338

Query: 362 WHTICISSDGDVYAFGG--NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
           +HT  ++  G++Y +G   +  G LG G D +  +P+ +  P LE +   SVSCG  HTA
Sbjct: 339 FHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIPKRISGP-LEGLQIASVSCGPWHTA 397

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWH 468
           +I   G++F +G   +G LG GD      P +V ++ G     VACG WH
Sbjct: 398 LITSTGQLFTFGDGTFGVLGHGDKETVFYPREVESLSGLRTIAVACGVWH 447



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 89/301 (29%), Positives = 132/301 (43%), Gaps = 54/301 (17%)

Query: 192 SLAKQTAESSSS--GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGG 249
           ++AK  AE +++  G  +    P  +  N  + +  +A G RH   +S  G+V+ WG   
Sbjct: 246 NVAKFGAEKNATCVGSRSDVLIPKPLESNVVLDVHHIACGVRHAALVSRQGEVFTWGEAS 305

Query: 250 EGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIAC 307
            G+LG G                   GKD +           GP     +    V  +AC
Sbjct: 306 GGRLGHG------------------MGKDVT-----------GPQLIESLAATSVDFVAC 336

Query: 308 GGRHSAVITDAGALLTFGWGLY--GQCGQGSTDDELSPNCVS-SLLGIQIEGVAAGLWHT 364
           G  H+  +T  G + T+G G +  G  G G+      P  +S  L G+QI  V+ G WHT
Sbjct: 337 GEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQIASVSCGPWHT 396

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD- 423
             I+S G ++ FG   FG LG G  +    PR  +  SL  + + +V+CG  H A I + 
Sbjct: 397 ALITSTGQLFTFGDGTFGVLGHGDKETVFYPR--EVESLSGLRTIAVACGVWHAAAIVEV 454

Query: 424 ----------DGKVFCWGWNKYGQLGLGDVIDRNIPSQVT--IEGCVPRNVACGWWHTLL 471
                      GK+F WG     +LG GD   R  P+ V+  I+    R VACG  H+L 
Sbjct: 455 IVTQSTSSISSGKLFTWGDGDKSRLGHGDKESRLKPTCVSALIDHTFHR-VACG--HSLT 511

Query: 472 L 472
           +
Sbjct: 512 V 512



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 55/229 (24%), Positives = 98/229 (42%), Gaps = 40/229 (17%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDI-----------GQVWGWGYGGEGQ 252
           GD+    +P  V    G+R   VA G  H  A+ ++           G+++ WG G + +
Sbjct: 419 GDKETVFYPREVESLSGLRTIAVACGVWHAAAIVEVIVTQSTSSISSGKLFTWGDGDKSR 478

Query: 253 LGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHS 312
           LG G +   +        I+ ++ +                           +ACG   +
Sbjct: 479 LGHGDKESRLKPTCVSALIDHTFHR---------------------------VACGHSLT 511

Query: 313 AVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGD 372
             +T +G + T G  +YGQ G  + D +L       L+   +E +A G +H   ++S  +
Sbjct: 512 VGLTTSGKVYTMGSTVYGQLGNPNADGKLPCLVEDKLIKDCVEEIACGAYHVAVLTSRNE 571

Query: 373 VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
           V+ +G    G+LG G  +    P L+D  +L+  H K+++CG+  TA I
Sbjct: 572 VFTWGKGANGRLGHGDIEDRKAPSLVD--TLKERHVKNIACGSNFTAAI 618


>gi|224099911|ref|XP_002311672.1| predicted protein [Populus trichocarpa]
 gi|222851492|gb|EEE89039.1| predicted protein [Populus trichocarpa]
          Length = 1109

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/171 (36%), Positives = 93/171 (54%), Gaps = 4/171 (2%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V  I+CG RH A++T  G + T+G    G+ G G  D    P  V SL    I+ VA G 
Sbjct: 267 VHQISCGVRHVALVTRQGEVFTWGEESGGRLGHGIEDHFTHPKLVESLAVTNIDYVACGE 326

Query: 362 WHTICISSDGDVYAF--GGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
           +HT  IS+ GD++ +  G N  G LG G D +  +P+ +  P LE +   S++CG  H+A
Sbjct: 327 YHTCAISTSGDLFTWGDGSNNSGLLGHGTDVSHWIPKRVSGP-LEGLQVLSIACGTWHSA 385

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
           +   +GK+F +G   +G LG GD    + P ++ ++ G     VACG WHT
Sbjct: 386 LATSNGKLFTFGDGTFGALGHGDRKSVSSPKELQSLNGLKTIKVACGVWHT 436



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 95/301 (31%), Positives = 138/301 (45%), Gaps = 41/301 (13%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGE--GQLGLGSRI-- 259
           G E+    P LV       I  VA G  HT A+S  G ++ WG G    G LG G+ +  
Sbjct: 300 GIEDHFTHPKLVESLAVTNIDYVACGEYHTCAISTSGDLFTWGDGSNNSGLLGHGTDVSH 359

Query: 260 ---RMVSSPHP------IPC------IESSYGKDRS------AAL---SRGSVNSEGPGF 295
              + VS P        I C      + +S GK  +       AL    R SV+S     
Sbjct: 360 WIPKRVSGPLEGLQVLSIACGTWHSALATSNGKLFTFGDGTFGALGHGDRKSVSSPKELQ 419

Query: 296 RVPGNYVKGIACGGRHSAVITD----------AGALLTFGWGLYGQCGQGSTDDELSPNC 345
            + G     +ACG  H+A I +          +  L T+G G   + G G+ D  L P C
Sbjct: 420 SLNGLKTIKVACGVWHTAAIVEVMSQSGSNISSRKLFTWGDGDKHRLGHGNKDAYLLPTC 479

Query: 346 VSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLEN 405
           VSSL+    + +A G   T+ +++ G V+  GG+ +GQLG      + +P L+    L  
Sbjct: 480 VSSLIDYNFQQLACGHTMTVALTTSGHVFTMGGSAYGQLGNPSSNGK-IPCLVQD-RLVG 537

Query: 406 VHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVAC 464
              + +SCGA HTAV+    +VF WG    GQLG GD  DR +P+ V  ++    +N++C
Sbjct: 538 EFVEEISCGAYHTAVLTSRSEVFTWGRGANGQLGHGDTEDRKLPTLVEALKERHVKNLSC 597

Query: 465 G 465
           G
Sbjct: 598 G 598



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 103/439 (23%), Positives = 181/439 (41%), Gaps = 91/439 (20%)

Query: 14  VFMWGYL----------PGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDS 63
           V++WG +            ++P ++ +L+P  +   + +     DV    CG       +
Sbjct: 227 VYIWGEIWSDGVFPDGSVSSVPTKNDVLTPKPLESNVVL-----DVHQISCGVRHVALVT 281

Query: 64  RK--LITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEV 119
           R+  + TWG      LG        H ++ E   +    +I   A G  H  A++  G++
Sbjct: 282 RQGEVFTWGEESGGRLGHGIEDHFTHPKLVESLAV---TNIDYVACGEYHTCAISTSGDL 338

Query: 120 YTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLT-EQVSP------RSQVSRSSGGT 172
           +TWG           G L  GT +   + +R S  L   QV         S ++ S+G  
Sbjct: 339 FTWG-----DGSNNSGLLGHGTDVSHWIPKRVSGPLEGLQVLSIACGTWHSALATSNGKL 393

Query: 173 SSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRH 232
            +  DG         R+ +S  K+                 L +LN G++   VA G  H
Sbjct: 394 FTFGDGTFGALGHGDRKSVSSPKE-----------------LQSLN-GLKTIKVACGVWH 435

Query: 233 TLALSDI----------GQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           T A+ ++           +++ WG G + +LG G++       + +P   SS        
Sbjct: 436 TAAIVEVMSQSGSNISSRKLFTWGDGDKHRLGHGNK-----DAYLLPTCVSSL------- 483

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                         +  N+ + +ACG   +  +T +G + T G   YGQ G  S++ ++ 
Sbjct: 484 --------------IDYNF-QQLACGHTMTVALTTSGHVFTMGGSAYGQLGNPSSNGKIP 528

Query: 343 PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPS 402
                 L+G  +E ++ G +HT  ++S  +V+ +G    GQLG G  +   LP L++A  
Sbjct: 529 CLVQDRLVGEFVEEISCGAYHTAVLTSRSEVFTWGRGANGQLGHGDTEDRKLPTLVEA-- 586

Query: 403 LENVHSKSVSCGARHTAVI 421
           L+  H K++SCGA  T+ I
Sbjct: 587 LKERHVKNLSCGANFTSSI 605



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 70/166 (42%), Gaps = 29/166 (17%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
           G+++    P  V+         +A G   T+AL+  G V+  G    GQLG        S
Sbjct: 469 GNKDAYLLPTCVSSLIDYNFQQLACGHTMTVALTTSGHVFTMGGSAYGQLG------NPS 522

Query: 264 SPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLT 323
           S   IPC+                        R+ G +V+ I+CG  H+AV+T    + T
Sbjct: 523 SNGKIPCLVQD---------------------RLVGEFVEEISCGAYHTAVLTSRSEVFT 561

Query: 324 FGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT--ICI 367
           +G G  GQ G G T+D   P  V +L    ++ ++ G   T  ICI
Sbjct: 562 WGRGANGQLGHGDTEDRKLPTLVEALKERHVKNLSCGANFTSSICI 607


>gi|18076889|emb|CAC86115.1| retinitis pigmentosa GTPase regulator [Mus musculus]
          Length = 1001

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 95/171 (55%), Gaps = 4/171 (2%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           ++CG  H+A++T    L  FG   +GQ G GS    + P C+ +L   +++  A G  HT
Sbjct: 40  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 99

Query: 365 ICISSDGDVYAFGGNQFGQLGTGG-DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
           +  +  G VYA GGN  GQLG G  D  +T  +++     + +  K +S GA  +A + +
Sbjct: 100 LVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTI--KQLSAGANTSAALTE 157

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAV 474
           DGK+F WG N  GQ+GL D  +  IP +VT+ G     ++CG++H+  + +
Sbjct: 158 DGKLFMWGDNSEGQIGLEDKSNVCIPHEVTV-GKPISWISCGYYHSAFVTM 207



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 139/298 (46%), Gaps = 45/298 (15%)

Query: 213 CLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR-----IRMVSSPHP 267
           C+  L P  ++   A G  HTL  +D G V+  G   EGQLGLG          +    P
Sbjct: 80  CIKALKPE-KVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTP 138

Query: 268 IPCIES-SYGKDRSAALSRGSV------NSEG------------PGFRVPGNYVKGIACG 308
              I+  S G + SAAL+          NSEG            P     G  +  I+CG
Sbjct: 139 ADTIKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISWISCG 198

Query: 309 GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVS--SLLGI--QIEGVAAGLWHT 364
             HSA +T  G L TFG    G+ G  S   EL  N  S   +LGI  ++  VA G  HT
Sbjct: 199 YYHSAFVTMDGELYTFGEPENGKLGLPS---ELLMNHRSPQRVLGIPERVIQVACGGGHT 255

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAET-LPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
           + ++ +  VYAFG  QFGQLG G    ET  P++++   +++     +SCG  HTA++ +
Sbjct: 256 VVLT-EKVVYAFGLGQFGQLGLGTFLFETSEPKIIE--RIKDQKICHISCGENHTALMTE 312

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC------VPRNVACGWWHTLLLAVP 475
            G ++ +G  ++G+LGLG     N  +Q     C        + +ACG  H L+ A P
Sbjct: 313 LGLLYTFGDGRHGKLGLG---MENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVFATP 367



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 110/258 (42%), Gaps = 48/258 (18%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
           ++ G  HT  ++   +++ +G    GQLGLGS+  ++       CI++            
Sbjct: 40  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKP----TCIKA------------ 83

Query: 286 GSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNC 345
                      +    VK  ACG  H+ V TD G +   G    GQ G G TDD  + + 
Sbjct: 84  -----------LKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQ 132

Query: 346 VSSLL-GIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLE 404
           +        I+ ++AG   +  ++ DG ++ +G N  GQ+G        +P         
Sbjct: 133 IVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIP--------- 183

Query: 405 NVHSKSV-------SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC 457
             H  +V       SCG  H+A +  DG+++ +G  + G+LGL   +  N  S   + G 
Sbjct: 184 --HEVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPSELLMNHRSPQRVLGI 241

Query: 458 VPR--NVACGWWHTLLLA 473
             R   VACG  HT++L 
Sbjct: 242 PERVIQVACGGGHTVVLT 259



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 83/198 (41%), Gaps = 56/198 (28%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
           R+  VA GG HT+ L++   V+ +G G  GQLGLG+ +   S P  I             
Sbjct: 244 RVIQVACGGGHTVVLTE-KVVYAFGLGQFGQLGLGTFLFETSEPKIIE------------ 290

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD--D 339
                         R+    +  I+CG  H+A++T+ G L TFG G +G+ G G  +  +
Sbjct: 291 --------------RIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTN 336

Query: 340 ELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL-- 397
           +  P   S+ L   ++ +A G  H +  ++                         PRL  
Sbjct: 337 QFFPTLCSNFLRFAVQLIACGGCHMLVFAT-------------------------PRLGT 371

Query: 398 LDAPSLENVHSKSVSCGA 415
           +D P  E+V+   +S G+
Sbjct: 372 IDEPKFEDVYEPYISTGS 389


>gi|5824124|emb|CAB54041.1| RPGR protein [Mus musculus]
          Length = 1001

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 95/171 (55%), Gaps = 4/171 (2%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           ++CG  H+A++T    L  FG   +GQ G GS    + P C+ +L   +++  A G  HT
Sbjct: 40  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 99

Query: 365 ICISSDGDVYAFGGNQFGQLGTGG-DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
           +  +  G VYA GGN  GQLG G  D  +T  +++     + +  K +S GA  +A + +
Sbjct: 100 LVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTI--KQLSAGANTSAALTE 157

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAV 474
           DGK+F WG N  GQ+GL D  +  IP +VT+ G     ++CG++H+  + +
Sbjct: 158 DGKLFMWGDNSEGQIGLEDKSNVCIPHEVTV-GKPISWISCGYYHSAFVTM 207



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 139/298 (46%), Gaps = 45/298 (15%)

Query: 213 CLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR-----IRMVSSPHP 267
           C+  L P  ++   A G  HTL  +D G V+  G   EGQLGLG          +    P
Sbjct: 80  CIKALKPE-KVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTP 138

Query: 268 IPCIES-SYGKDRSAALSRGSV------NSEG------------PGFRVPGNYVKGIACG 308
              I+  S G + SAAL+          NSEG            P     G  +  I+CG
Sbjct: 139 ADTIKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISWISCG 198

Query: 309 GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVS--SLLGI--QIEGVAAGLWHT 364
             HSA +T  G L TFG    G+ G     +EL  N  S   +LGI  ++  VA G  HT
Sbjct: 199 YYHSAFVTMDGELYTFGEPENGKLG---LPNELLMNHRSPQRVLGIPERVIQVACGGGHT 255

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAET-LPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
           + ++ +  VYAFG  QFGQLG G    ET  P++++   +++     +SCG  HTA++ +
Sbjct: 256 VVLT-EKVVYAFGLGQFGQLGLGTFLFETSEPKIIE--RIKDQKICHISCGENHTALMTE 312

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC------VPRNVACGWWHTLLLAVP 475
            G ++ +G  ++G+LGLG     N  +Q     C        + +ACG  H L+ A P
Sbjct: 313 LGLLYTFGDGRHGKLGLG---MENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVFATP 367



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 111/258 (43%), Gaps = 48/258 (18%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
           ++ G  HT  ++   +++ +G    GQLGLGS+  ++       CI++            
Sbjct: 40  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKP----TCIKA------------ 83

Query: 286 GSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNC 345
                      +    VK  ACG  H+ V TD G +   G    GQ G G TDD  + + 
Sbjct: 84  -----------LKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQ 132

Query: 346 VSSLL-GIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLE 404
           +        I+ ++AG   +  ++ DG ++ +G N  GQ+G        +P         
Sbjct: 133 IVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIP--------- 183

Query: 405 NVHSKSV-------SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC 457
             H  +V       SCG  H+A +  DG+++ +G  + G+LGL + +  N  S   + G 
Sbjct: 184 --HEVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGI 241

Query: 458 VPR--NVACGWWHTLLLA 473
             R   VACG  HT++L 
Sbjct: 242 PERVIQVACGGGHTVVLT 259



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 83/198 (41%), Gaps = 56/198 (28%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
           R+  VA GG HT+ L++   V+ +G G  GQLGLG+ +   S P  I             
Sbjct: 244 RVIQVACGGGHTVVLTE-KVVYAFGLGQFGQLGLGTFLFETSEPKIIE------------ 290

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD--D 339
                         R+    +  I+CG  H+A++T+ G L TFG G +G+ G G  +  +
Sbjct: 291 --------------RIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTN 336

Query: 340 ELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL-- 397
           +  P   S+ L   ++ +A G  H +  ++                         PRL  
Sbjct: 337 QFFPTLCSNFLRFAVQLIACGGCHMLVFAT-------------------------PRLGT 371

Query: 398 LDAPSLENVHSKSVSCGA 415
           +D P  E+V+   +S G+
Sbjct: 372 IDEPKFEDVYEPYISTGS 389


>gi|449081281|sp|Q9R0X5.2|RPGR_MOUSE RecName: Full=X-linked retinitis pigmentosa GTPase regulator;
           Short=mRpgr; Flags: Precursor
          Length = 1001

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 95/171 (55%), Gaps = 4/171 (2%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           ++CG  H+A++T    L  FG   +GQ G GS    + P C+ +L   +++  A G  HT
Sbjct: 40  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 99

Query: 365 ICISSDGDVYAFGGNQFGQLGTGG-DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
           +  +  G VYA GGN  GQLG G  D  +T  +++     + +  K +S GA  +A + +
Sbjct: 100 LVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTI--KQLSAGANTSAALTE 157

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAV 474
           DGK+F WG N  GQ+GL D  +  IP +VT+ G     ++CG++H+  + +
Sbjct: 158 DGKLFMWGDNSEGQIGLEDKSNVCIPHEVTV-GKPISWISCGYYHSAFVTM 207



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 139/298 (46%), Gaps = 45/298 (15%)

Query: 213 CLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR-----IRMVSSPHP 267
           C+  L P  ++   A G  HTL  +D G V+  G   EGQLGLG          +    P
Sbjct: 80  CIKALKPE-KVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTP 138

Query: 268 IPCIES-SYGKDRSAALSRGSV------NSEG------------PGFRVPGNYVKGIACG 308
              I+  S G + SAAL+          NSEG            P     G  +  I+CG
Sbjct: 139 ADTIKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISWISCG 198

Query: 309 GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVS--SLLGI--QIEGVAAGLWHT 364
             HSA +T  G L TFG    G+ G     +EL  N  S   +LGI  ++  VA G  HT
Sbjct: 199 YYHSAFVTMDGELYTFGEPENGKLG---LPNELLMNHRSPQRVLGIPERVIQVACGGGHT 255

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAET-LPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
           + ++ +  VYAFG  QFGQLG G    ET  P++++   +++     +SCG  HTA++ +
Sbjct: 256 VVLT-EKVVYAFGLGQFGQLGLGTFLFETSEPKIIE--RIKDQKICHISCGENHTALMTE 312

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC------VPRNVACGWWHTLLLAVP 475
            G ++ +G  ++G+LGLG     N  +Q     C        + +ACG  H L+ A P
Sbjct: 313 LGLLYTFGDGRHGKLGLG---MENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVFATP 367



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 111/258 (43%), Gaps = 48/258 (18%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
           ++ G  HT  ++   +++ +G    GQLGLGS+  ++       CI++            
Sbjct: 40  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKP----TCIKA------------ 83

Query: 286 GSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNC 345
                      +    VK  ACG  H+ V TD G +   G    GQ G G TDD  + + 
Sbjct: 84  -----------LKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQ 132

Query: 346 VSSLL-GIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLE 404
           +        I+ ++AG   +  ++ DG ++ +G N  GQ+G        +P         
Sbjct: 133 IVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIP--------- 183

Query: 405 NVHSKSV-------SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC 457
             H  +V       SCG  H+A +  DG+++ +G  + G+LGL + +  N  S   + G 
Sbjct: 184 --HEVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGI 241

Query: 458 VPR--NVACGWWHTLLLA 473
             R   VACG  HT++L 
Sbjct: 242 PERVIQVACGGGHTVVLT 259



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 83/198 (41%), Gaps = 56/198 (28%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
           R+  VA GG HT+ L++   V+ +G G  GQLGLG+ +   S P  I             
Sbjct: 244 RVIQVACGGGHTVVLTE-KVVYAFGLGQFGQLGLGTFLFETSEPKIIE------------ 290

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD--D 339
                         R+    +  I+CG  H+A++T+ G L TFG G +G+ G G  +  +
Sbjct: 291 --------------RIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTN 336

Query: 340 ELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL-- 397
           +  P   S+ L   ++ +A G  H +  ++                         PRL  
Sbjct: 337 QFFPTLCSNFLRFAVQLIACGGCHMLVFAT-------------------------PRLGT 371

Query: 398 LDAPSLENVHSKSVSCGA 415
           +D P  E+V+   +S G+
Sbjct: 372 IDEPKFEDVYEPYISTGS 389


>gi|15088545|gb|AAK84081.1|AF326781_2 putative chromosome condensation factor [Triticum monococcum]
          Length = 907

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/171 (36%), Positives = 95/171 (55%), Gaps = 4/171 (2%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V  + CG RH++++T  G + T+G    G+ G G+ +D + P  V SL    I+ VA G 
Sbjct: 79  VYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNIDFVACGE 138

Query: 362 WHTICISSDGDVYAFGG--NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
           +HT  +++ G++Y +G   +  G LG G D    +PR +  P LE +    VSCG  HTA
Sbjct: 139 FHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGP-LEGLQIAYVSCGTWHTA 197

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
           +I   G++F +G   +G LG GD+   + P +V ++ G     VACG WHT
Sbjct: 198 LITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGLKTIAVACGVWHT 248



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 119/258 (46%), Gaps = 42/258 (16%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G++IA V+ G  HT  ++ +GQ++ +G G  G LG G  ++ +S P  +  +        
Sbjct: 183 GLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGD-LKSISCPREVESLS------- 234

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITD-----------AGALLTFGWGL 328
                              G     +ACG  H+A I +           AG L T+G G 
Sbjct: 235 -------------------GLKTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGD 275

Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGG 388
             + G G  +  L P CV+SL+      VA G   T+ +++ G V+  G + +GQLG   
Sbjct: 276 KHRLGHGDKEARLKPTCVASLIDYDFYRVACGHSLTVGLTTSGKVWTMGNSVYGQLGNLN 335

Query: 389 DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNI 448
                 P L++   + + H   ++CG+ H AV+    +VF WG    G+LG GD+ DR +
Sbjct: 336 SDGR--PCLVE-DKIASEHVLQIACGSYHVAVLTSRSEVFTWGKGANGRLGHGDIEDRKV 392

Query: 449 PSQV-TIEGCVPRNVACG 465
           P+ V  +     R++ACG
Sbjct: 393 PTTVEALRDRAVRHIACG 410



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 61/165 (36%), Gaps = 30/165 (18%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG-LGSRIRMV 262
           GD+     P  V          VA G   T+ L+  G+VW  G    GQLG L S  R  
Sbjct: 282 GDKEARLKPTCVASLIDYDFYRVACGHSLTVGLTTSGKVWTMGNSVYGQLGNLNSDGR-- 339

Query: 263 SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL 322
                 PC+                        ++   +V  IACG  H AV+T    + 
Sbjct: 340 ------PCLVED---------------------KIASEHVLQIACGSYHVAVLTSRSEVF 372

Query: 323 TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI 367
           T+G G  G+ G G  +D   P  V +L    +  +A G   T  I
Sbjct: 373 TWGKGANGRLGHGDIEDRKVPTTVEALRDRAVRHIACGANFTAAI 417


>gi|327268092|ref|XP_003218832.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Anolis
           carolinensis]
          Length = 4839

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 127/266 (47%), Gaps = 30/266 (11%)

Query: 212 PCLVTLNPGVRIATVAA--GGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP 269
           P LV       I  +AA   G H LAL+  G+V+ WG G  G+LG G  + +   P  I 
Sbjct: 485 PQLVQSLASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPL-EEPKMIS 543

Query: 270 CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
            +                           G +V  IACG  +SA IT  G L T+G G Y
Sbjct: 544 ALSGKQA----------------------GKHVVHIACGSTYSAAITAEGELYTWGRGNY 581

Query: 330 GQCGQGSTDDELSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTG 387
           G+ G GS++D+  P  V+ L G+++  V+  +G   T+ ++ +G V+++G   +G+LG G
Sbjct: 582 GRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 641

Query: 388 GDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
           G      P+L++   L+++    VSCG++ +  +  DG+V+ WG     +LG G      
Sbjct: 642 GSDGCKTPKLIE--KLQDLDIVKVSCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVR 699

Query: 448 IPSQVT-IEGCVPRNVACGWWHTLLL 472
            P  +  ++G    +V  G  H L L
Sbjct: 700 YPKLLEGLQGEKVIDVVAGSTHCLAL 725



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 130/306 (42%), Gaps = 80/306 (26%)

Query: 218  NPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
            N  V+   V +GGRH +AL+  G+V+ WG G +G+LG  SR+     P  I  +++   +
Sbjct: 3048 NYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIR 3106

Query: 278  DRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST 337
            D                          IACG  HSA IT +G L ++G G YG+ G G  
Sbjct: 3107 D--------------------------IACGSSHSAAITSSGELYSWGLGEYGRLGHGDN 3140

Query: 338  DDELSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLP 395
              +L P  V  LLG ++  VA G     T+ ++ +G V+++G   FG+LG GG +   +P
Sbjct: 3141 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIP 3200

Query: 396  RLLDAPSLE------------------------------------NVHSKS--------- 410
            + ++  + +                                    +VH +          
Sbjct: 3201 QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRG 3260

Query: 411  -----VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVAC 464
                 V+ GA H   + D G+V+ WG N +GQ G G       P+ V  +EG     VAC
Sbjct: 3261 KKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVAC 3320

Query: 465  GWWHTL 470
            G  H++
Sbjct: 3321 GSSHSV 3326



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 144/365 (39%), Gaps = 82/365 (22%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V   +G  HC+A++  GEVY+WG  E         D   G G ++   +R    + E + 
Sbjct: 4047 VAVNSGGKHCLALSSEGEVYSWGEAE---------DGKLGHG-NRSPCDRPR--VIESLR 4094

Query: 161  PRSQVSRSSGGTSSG-TDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
                V  ++GG  S      G      K R   L          GD      P LV    
Sbjct: 4095 GIEVVDIAAGGAHSACITAAGDLYTWGKGRYGRLGH--------GDSEDQLKPKLVEALQ 4146

Query: 220  GVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
            G R+  +A  +G   TL L+D   VW WG G  G+LG G                   G 
Sbjct: 4147 GYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-------------------GS 4187

Query: 278  DRSAALSRGSVNSEGPGFRVPGNY-------VKGIACGGRHSAVITDAGALLTFGWGLYG 330
            D               G +VP          V  + CG + S  +T +GA+ T+G G Y 
Sbjct: 4188 D---------------GCKVPMKIDSLTGVGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4232

Query: 331  QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            + G GS D    P  V  L G ++  +A G  H +C + DG+VY +G N  GQLG G   
Sbjct: 4233 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTN 4292

Query: 391  AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
            A   PRL+ A  L+      V+CG+ HT           W  +K    G        +P+
Sbjct: 4293 AIQRPRLVAA--LQGKKINRVACGSAHT---------LAWSTSKPANAG-------KLPT 4334

Query: 451  QVTIE 455
            QV +E
Sbjct: 4335 QVPME 4339



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 72/278 (25%), Positives = 128/278 (46%), Gaps = 54/278 (19%)

Query: 225  TVAAGGRHTLALSDIGQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAA 282
            T++AGG         G ++GWG+   GQLG   G+++++     P PC   +    R   
Sbjct: 3950 TLSAGGS--------GTIYGWGHNHRGQLGGIEGAKVKV-----PTPC--EALATLRPVQ 3994

Query: 283  LSRG-----SVNSEGPGF-------------------------RVPGNYVKGIAC--GGR 310
            L  G     +V ++G  +                          +   ++K +A   GG+
Sbjct: 3995 LIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGK 4054

Query: 311  HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
            H   ++  G + ++G    G+ G G+      P  + SL GI++  +AAG  H+ CI++ 
Sbjct: 4055 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAA 4114

Query: 371  GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGA--RHTAVIADDGKVF 428
            GD+Y +G  ++G+LG G  + +  P+L++A  L+      ++CG+    T  + DD  V+
Sbjct: 4115 GDLYTWGKGRYGRLGHGDSEDQLKPKLVEA--LQGYRVIDIACGSGDAQTLCLTDDDTVW 4172

Query: 429  CWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
             WG   YG+LG G      +P ++ ++ G     V CG
Sbjct: 4173 SWGDGDYGKLGRGGSDGCKVPMKIDSLTGVGVVKVECG 4210



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 107/389 (27%), Positives = 161/389 (41%), Gaps = 60/389 (15%)

Query: 65   KLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGW 124
            K+  WG  +D  Q     G   ++P      +  ++V+ A G     AVT  G+VY  G 
Sbjct: 2964 KVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3022

Query: 125  KECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSS---GTDGR-- 179
                 +GR+   LS+GT        RQ + L+  V  +  V+  SGG  +     DG+  
Sbjct: 3023 ---ATNGRLGLGLSSGTV----PIPRQITALSNYVVKK--VAVHSGGRHAMALTVDGKVF 3073

Query: 180  --GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS 237
              G G++G         K    S  + D+     P L+      RI  +A G  H+ A++
Sbjct: 3074 SWGEGDDG---------KLGHFSRMNCDK-----PRLIEALKTKRIRDIACGSSHSAAIT 3119

Query: 238  DIGQVWGWGYGGEGQLGLGS-----RIRMVSSPHPIPCIESSYGKDRSAALS---RGSVN 289
              G+++ WG G  G+LG G      + +MV        I+ + G   +  L+    G V 
Sbjct: 3120 SSGELYSWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 3179

Query: 290  SEGPG-------------------FRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
            S G G                    R+ G  V  I CG + S  +T +G + T+G G Y 
Sbjct: 3180 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 3239

Query: 331  QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            + G G+      P  V  L G +I  VA G  H + ++  G VYA+G N  GQ G G   
Sbjct: 3240 RLGHGTDVHVRKPQVVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTT 3299

Query: 391  AETLPRLLDAPSLENVHSKSVSCGARHTA 419
                P L+    LE      V+CG+ H+ 
Sbjct: 3300 VNRKPTLVQG--LEGQKITRVACGSSHSV 3326



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 71/274 (25%), Positives = 120/274 (43%), Gaps = 44/274 (16%)

Query: 205  DENLSAFPCLVTLNPGVRIATVAAGG---RHTLALSDIG----QVWGWGYGGEGQLG--L 255
            DE+L+A P L + N          G    + T  L  +     +V+ WG   + QLG   
Sbjct: 2921 DEDLAAVPFLASDNEEEDDDKANTGSLVRKKTSGLESVATIRTKVFVWGLNDKDQLGGLK 2980

Query: 256  GSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVI 315
            GS+I++            S+ +  SA                  N V+ +A G +    +
Sbjct: 2981 GSKIKV-----------PSFSETLSAL-----------------NVVQ-VAGGSKSLFAV 3011

Query: 316  TDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVA--AGLWHTICISSDGD 372
            T  G +   G    G+ G G +   +  P  +++L    ++ VA  +G  H + ++ DG 
Sbjct: 3012 TVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGK 3071

Query: 373  VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGW 432
            V+++G    G+LG         PRL++A  L+    + ++CG+ H+A I   G+++ WG 
Sbjct: 3072 VFSWGEGDDGKLGHFSRMNCDKPRLIEA--LKTKRIRDIACGSSHSAAITSSGELYSWGL 3129

Query: 433  NKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACG 465
             +YG+LG GD   +  P  V +  G     VACG
Sbjct: 3130 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3163



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 94/217 (43%), Gaps = 38/217 (17%)

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
           SS D+ +   P LVT   G+++  V+  +G   TLA+++ GQVW WG G  G+LG G   
Sbjct: 588 SSEDQTI---PMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRG--- 641

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITD 317
                                     GS   + P    ++    +  ++CG + S  +T 
Sbjct: 642 --------------------------GSDGCKTPKLIEKLQDLDIVKVSCGSQFSVALTK 675

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
            G + ++G G   + G G+ +    P  +  L G ++  V AG  H + ++ D +VY++G
Sbjct: 676 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGEKVIDVVAGSTHCLALTEDSEVYSWG 735

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
            N   Q         T P     P L++ H   ++CG
Sbjct: 736 SND--QCQHFDTLRITKPDPTALPGLDSKHIVGIACG 770



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 81/310 (26%), Positives = 121/310 (39%), Gaps = 47/310 (15%)

Query: 57   AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEG 116
            AMA++   K+ +WG  DD G+    S  + + P          I   A G +H  A+T  
Sbjct: 3063 AMALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSS 3121

Query: 117  GEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGT 176
            GE+Y+WG  E    GR  G     T L   + +        QV+  S+ +++   T  G 
Sbjct: 3122 GELYSWGLGE---YGR-LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3177

Query: 177  DGR-GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLA 235
                G G+ G   R              G E  +    +  LN G  +  +  G + +LA
Sbjct: 3178 VFSWGDGDFGKLGR-------------GGSEGCNIPQNIERLN-GQGVCQIECGAQFSLA 3223

Query: 236  LSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF 295
            L+  G VW WG G   +LG G+ +  V  P  +                         G 
Sbjct: 3224 LTKSGVVWTWGKGDYFRLGHGTDVH-VRKPQVV------------------------EGL 3258

Query: 296  RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
            R  G  +  +A G  H   +TD G +  +G   +GQ G G+T     P  V  L G +I 
Sbjct: 3259 R--GKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKIT 3316

Query: 356  GVAAGLWHTI 365
             VA G  H++
Sbjct: 3317 RVACGSSHSV 3326



 Score = 42.4 bits (98), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 3/78 (3%)

Query: 48  DVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAA 105
           D+    CG  F++A++   ++ +WG  D+    + T  +H   P+         ++   A
Sbjct: 659 DIVKVSCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGEKVIDVVA 717

Query: 106 GWAHCVAVTEGGEVYTWG 123
           G  HC+A+TE  EVY+WG
Sbjct: 718 GSTHCLALTEDSEVYSWG 735



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 5/73 (6%)

Query: 53   GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
            G  F++A++ S  + TWG  D   LG     S  H   P          ++  A G  HC
Sbjct: 4210 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRRPRQVQGLQGKKVIAIATGSLHC 4266

Query: 111  VAVTEGGEVYTWG 123
            V  TE GEVYTWG
Sbjct: 4267 VCCTEDGEVYTWG 4279


>gi|403332050|gb|EJY65013.1| hypothetical protein OXYTRI_14837 [Oxytricha trifallax]
 gi|403356523|gb|EJY77858.1| hypothetical protein OXYTRI_00501 [Oxytricha trifallax]
          Length = 489

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 143/306 (46%), Gaps = 24/306 (7%)

Query: 167 RSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATV 226
            +SG  S+    +G      K R  SL++Q + S ++   NL   P L+ + P V+   V
Sbjct: 137 NASGDISAAVTSQGQIYTWGKTRGGSLSQQKSLSRAT---NL-LLPTLI-VAPEVQFVQV 191

Query: 227 AAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRG 286
           A G  H   ++  G++  WG   +G+LG  ++++  S          SY    +     G
Sbjct: 192 ACGKTHLAGVTKDGKLITWGNPDQGKLGHNAQLQQESKNKSYS--PRSYADYNAINFVGG 249

Query: 287 SVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCV 346
           ++ S+          +   +CG +H+A +T  G + T+G+G  G  G G+ D    P  V
Sbjct: 250 ALESKK---------IIQASCGFQHTACLTQDGEVYTWGFGKNGALGHGNWDQVDLPKKV 300

Query: 347 SSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT--GGDQAETLPRLLDAPSLE 404
             L    I  +  G+ +T  +  DG++Y++G N++GQLGT         +P  L  P   
Sbjct: 301 EGL--SNIVKIDCGMDYTFALDKDGNIYSWGSNRYGQLGTTQSNINKHNVPIQLQLPH-G 357

Query: 405 NVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVP-RNVA 463
           + H   +SCG  H+A + D G+ F WG+   GQLG  +  + N P +  +E   P R V 
Sbjct: 358 SSHVVDISCGEEHSAFLNDKGEAFIWGYGNDGQLGHKEKTNLNQPKK--LEFTEPLRRVV 415

Query: 464 CGWWHT 469
           CG  HT
Sbjct: 416 CGGGHT 421



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 117/278 (42%), Gaps = 55/278 (19%)

Query: 245 WGYGGEGQLGLGSRIRMVSSPHPIPCIES-----------------------SYGKDRSA 281
           WG G  GQLG G+    +S P P+  +                         ++GK R  
Sbjct: 102 WGNGQNGQLGNGNETLSLSIPSPVQVLSDEDIIQVNASGDISAAVTSQGQIYTWGKTRGG 161

Query: 282 ALSRGSVNSEGPGFRVPGNYVK------GIACGGRHSAVITDAGALLTFG------WGLY 329
           +LS+    S      +P   V        +ACG  H A +T  G L+T+G       G  
Sbjct: 162 SLSQQKSLSRATNLLLPTLIVAPEVQFVQVACGKTHLAGVTKDGKLITWGNPDQGKLGHN 221

Query: 330 GQCGQGSTDDELSPNCVSSLLGIQIEG----------VAAGLWHTICISSDGDVYAFGGN 379
            Q  Q S +   SP   +    I   G           + G  HT C++ DG+VY +G  
Sbjct: 222 AQLQQESKNKSYSPRSYADYNAINFVGGALESKKIIQASCGFQHTACLTQDGEVYTWGFG 281

Query: 380 QFGQLGTGG-DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           + G LG G  DQ + LP+ ++   L N+    + CG  +T  +  DG ++ WG N+YGQL
Sbjct: 282 KNGALGHGNWDQVD-LPKKVEG--LSNI--VKIDCGMDYTFALDKDGNIYSWGSNRYGQL 336

Query: 439 GL--GDVIDRNIPSQVTIEGCVPR--NVACGWWHTLLL 472
           G    ++   N+P Q+ +        +++CG  H+  L
Sbjct: 337 GTTQSNINKHNVPIQLQLPHGSSHVVDISCGEEHSAFL 374



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 91/373 (24%), Positives = 150/373 (40%), Gaps = 64/373 (17%)

Query: 88  IPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDV 147
           IP P  + ++  I++  A      AVT  G++YTWG           G LS    L    
Sbjct: 121 IPSPVQVLSDEDIIQVNASGDISAAVTSQGQIYTWGKTRG-------GSLSQQKSLS--- 170

Query: 148 FERQSSFL--TEQVSPRSQVSRSSGGTSS----GTDGR----GSGEEGSKRRRISLAKQT 197
             R ++ L  T  V+P  Q  + + G +       DG+    G+ ++G       L +++
Sbjct: 171 --RATNLLLPTLIVAPEVQFVQVACGKTHLAGVTKDGKLITWGNPDQGKLGHNAQLQQES 228

Query: 198 AESSSS--GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGL 255
              S S     + +A   +       +I   + G +HT  L+  G+V+ WG+G  G LG 
Sbjct: 229 KNKSYSPRSYADYNAINFVGGALESKKIIQASCGFQHTACLTQDGEVYTWGFGKNGALGH 288

Query: 256 GSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVI 315
           G+    V  P  +  +                            N VK I CG  ++  +
Sbjct: 289 GN-WDQVDLPKKVEGLS---------------------------NIVK-IDCGMDYTFAL 319

Query: 316 TDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGI-----QIEGVAAGLWHTICISSD 370
              G + ++G   YGQ G  +T   ++ + V   L +      +  ++ G  H+  ++  
Sbjct: 320 DKDGNIYSWGSNRYGQLG--TTQSNINKHNVPIQLQLPHGSSHVVDISCGEEHSAFLNDK 377

Query: 371 GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
           G+ + +G    GQLG         P+ L+         + V CG  HT VI   GK+F +
Sbjct: 378 GEAFIWGYGNDGQLGHKEKTNLNQPKKLEFTE----PLRRVVCGGGHTGVITTAGKLFLF 433

Query: 431 GWNKYGQLGLGDV 443
           G  + GQLG GDV
Sbjct: 434 GRGRDGQLGRGDV 446



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 87/385 (22%), Positives = 145/385 (37%), Gaps = 79/385 (20%)

Query: 14  VFMWGYLPG-ALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCG--FAMAISDSRKLITWG 70
           ++ WG   G +L Q+  +     + LP  + +         CG      ++   KLITWG
Sbjct: 152 IYTWGKTRGGSLSQQKSLSRATNLLLPTLIVAPEVQFVQVACGKTHLAGVTKDGKLITWG 211

Query: 71  STDD--LG---QSYVTSGKHGEIPEPFP----------LPTEASIVKAAAGWAHCVAVTE 115
           + D   LG   Q    S      P  +                 I++A+ G+ H   +T+
Sbjct: 212 NPDQGKLGHNAQLQQESKNKSYSPRSYADYNAINFVGGALESKKIIQASCGFQHTACLTQ 271

Query: 116 GGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGT--S 173
            GEVYTWG+ +        G L  G     D        L ++V   S + +   G   +
Sbjct: 272 DGEVYTWGFGKN-------GALGHGNWDQVD--------LPKKVEGLSNIVKIDCGMDYT 316

Query: 174 SGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGV-RIATVAAGGRH 232
              D  G+       R   L       ++  + N    P  + L  G   +  ++ G  H
Sbjct: 317 FALDKDGNIYSWGSNRYGQLG------TTQSNINKHNVPIQLQLPHGSSHVVDISCGEEH 370

Query: 233 TLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEG 292
           +  L+D G+ + WGYG +GQLG   +  + + P  +   E                    
Sbjct: 371 SAFLNDKGEAFIWGYGNDGQLGHKEKTNL-NQPKKLEFTEP------------------- 410

Query: 293 PGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN-------- 344
                    ++ + CGG H+ VIT AG L  FG G  GQ G+G  ++ ++          
Sbjct: 411 ---------LRRVVCGGGHTGVITTAGKLFLFGRGRDGQLGRGDVNESMAAFRIEPKEVV 461

Query: 345 CVSSLLGIQIEGVAAGLWHTICISS 369
            +S  L  ++  +A G  H + I++
Sbjct: 462 NISQTLKAEVLEIALGSNHCLAIAA 486


>gi|428181106|gb|EKX49971.1| hypothetical protein GUITHDRAFT_161991 [Guillardia theta CCMP2712]
          Length = 658

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/246 (29%), Positives = 110/246 (44%), Gaps = 30/246 (12%)

Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
           S  P  V    G+ I  +  G  H LAL   G++  WG G  GQLG  S     S+P  I
Sbjct: 97  SQRPQEVVSLAGLSIKLITCGSDHVLALDASGKIRSWGRGESGQLGHAS-FSHSSTPSII 155

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL 328
             + S                            VK +ACG   SA + + G L T+G   
Sbjct: 156 DELAS--------------------------QRVKEVACGVAFSAALMEGGQLYTWGCNR 189

Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGG 388
           YGQ GQG       P  + S+    +  +A G  H + +++  DVY +G N +GQLG G 
Sbjct: 190 YGQLGQGDRTSSAIPRMLPSMNHRHVHLMACGAAHIVVLTTSRDVYTWGNNSYGQLGHGF 249

Query: 389 DQAETL-PRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
            +   L P+ +   S  ++  K +  G  H+ V+   G ++ WG   +GQLG GD+  ++
Sbjct: 250 RKKHCLQPKSVRVMSGLDI--KQIVAGENHSCVMTSFGDIYTWGRGDFGQLGHGDMESKD 307

Query: 448 IPSQVT 453
           IP+ ++
Sbjct: 308 IPTLLS 313



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 105/234 (44%), Gaps = 29/234 (12%)

Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
           S+ P ++      R+  VA G   + AL + GQ++ WG    GQLG G R    + P  +
Sbjct: 149 SSTPSIIDELASQRVKEVACGVAFSAALMEGGQLYTWGCNRYGQLGQGDRTS-SAIPRML 207

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL 328
           P +                             +V  +ACG  H  V+T +  + T+G   
Sbjct: 208 PSMNH--------------------------RHVHLMACGAAHIVVLTTSRDVYTWGNNS 241

Query: 329 YGQCGQGSTDDE-LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG 387
           YGQ G G      L P  V  + G+ I+ + AG  H+  ++S GD+Y +G   FGQLG G
Sbjct: 242 YGQLGHGFRKKHCLQPKSVRVMSGLDIKQIVAGENHSCVMTSFGDIYTWGRGDFGQLGHG 301

Query: 388 GDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
             +++ +P LL +P      +  +  GA     +   G V+ WG N +GQLG G
Sbjct: 302 DMESKDIPTLL-SPLDPKTQASLIVSGADFIMAMTYSGAVYSWGRNCFGQLGHG 354



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 94/417 (22%), Positives = 155/417 (37%), Gaps = 76/417 (18%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
           G    +A+  S K+ +WG  +  GQ    S  H   P          + + A G A   A
Sbjct: 117 GSDHVLALDASGKIRSWGRGES-GQLGHASFSHSSTPSIIDELASQRVKEVACGVAFSAA 175

Query: 113 VTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDK---DVFERQSSFLTEQVSPRSQVSRSS 169
           + EGG++YTWG   C   G++     T + + +    +  R    +    +    ++ S 
Sbjct: 176 LMEGGQLYTWG---CNRYGQLGQGDRTSSAIPRMLPSMNHRHVHLMACGAAHIVVLTTSR 232

Query: 170 GGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAG 229
              + G +  G    G +++                      P  V +  G+ I  + AG
Sbjct: 233 DVYTWGNNSYGQLGHGFRKKHC------------------LQPKSVRVMSGLDIKQIVAG 274

Query: 230 GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVN 289
             H+  ++  G ++ WG G  GQLG G    M S    IP + S       A+L      
Sbjct: 275 ENHSCVMTSFGDIYTWGRGDFGQLGHGD---MESK--DIPTLLSPLDPKTQASL------ 323

Query: 290 SEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST----------DD 339
                          I  G      +T +GA+ ++G   +GQ G G             D
Sbjct: 324 ---------------IVSGADFIMAMTYSGAVYSWGRNCFGQLGHGVDMHYSKSNRFPSD 368

Query: 340 ELSPNCVSSLL------GIQIEGVAAGLWHTICISSDGD-VYAFGGNQFGQLGTGGDQAE 392
            +SP  +S          I +  ++ G  H + I+   D ++A+G  + GQLG       
Sbjct: 369 VISPKIISFFAASEEHDAISLSSISCGSHHVLAITEKKDTLFAWGRGEHGQLGLDPRDTS 428

Query: 393 TLPRLLDAPSLENVHSKSVSCGARHTAVIAD--------DGKVFCWGWNKYGQLGLG 441
             P   +   ++ +   + +C   H+ V+A         D KVF WG   +GQLG G
Sbjct: 429 FRPIPQEVKKMKGMIVLAAACSENHSVVVATMPGSGPKGDMKVFSWGRGSFGQLGYG 485



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 77/313 (24%), Positives = 118/313 (37%), Gaps = 62/313 (19%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVK 102
           R V    CG A  + ++ SR + TWG+     LG  +    KH   P+   + +   I +
Sbjct: 213 RHVHLMACGAAHIVVLTTSRDVYTWGNNSYGQLGHGF--RKKHCLQPKSVRVMSGLDIKQ 270

Query: 103 AAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPR 162
             AG  H   +T  G++YTWG  +       FG L  G    KD+       L   + P+
Sbjct: 271 IVAGENHSCVMTSFGDIYTWGRGD-------FGQLGHGDMESKDI-----PTLLSPLDPK 318

Query: 163 SQVSRSSGG-------TSSGTD---GRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFP 212
           +Q S    G       T SG     GR    +      +  +K     S      + +F 
Sbjct: 319 TQASLIVSGADFIMAMTYSGAVYSWGRNCFGQLGHGVDMHYSKSNRFPSDVISPKIISFF 378

Query: 213 CLVTLNPGVRIATVAAGGRHTLALSDIGQ-VWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
                +  + +++++ G  H LA+++    ++ WG G  GQLGL  R    +S  PIP  
Sbjct: 379 AASEEHDAISLSSISCGSHHVLAITEKKDTLFAWGRGEHGQLGLDPRD---TSFRPIPQE 435

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITD------AGALLTFG 325
                                   ++ G  V   AC   HS V+         G +  F 
Sbjct: 436 VK----------------------KMKGMIVLAAACSENHSVVVATMPGSGPKGDMKVFS 473

Query: 326 WGL--YGQCGQGS 336
           WG   +GQ G GS
Sbjct: 474 WGRGSFGQLGYGS 486


>gi|296189284|ref|XP_002742715.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
           [Callithrix jacchus]
          Length = 577

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/176 (36%), Positives = 101/176 (57%), Gaps = 7/176 (3%)

Query: 303 KGIAC----GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS-LLGIQIEGV 357
           K IAC     G H  + T  G + T+G   Y Q G G+T+  L P  +S+ L   Q+  V
Sbjct: 124 KKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV 183

Query: 358 AAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARH 417
           A G +H++ ++SDG+V+A+G N  GQ+G+G    +  PR +    L+N    +++CG   
Sbjct: 184 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPTPRRVTG-CLQNKVVVTIACGQMC 242

Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
              + D G+V+ WG+N  GQLGLG+  ++  P +V  ++G   + VACG+ HTL+L
Sbjct: 243 CMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 298



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 123/253 (48%), Gaps = 31/253 (12%)

Query: 220 GVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
           G +IA ++ G G H +  +  G+V+ WG+    QLG G+     ++   +PC  S+    
Sbjct: 123 GKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT-----TNHGLVPCHIST---- 173

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
                             +    V  +ACG  HS V+T  G +  +G+   GQ G GST 
Sbjct: 174 -----------------NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTV 216

Query: 339 DELSPNCVSSLLGIQIE-GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
           ++ +P  V+  L  ++   +A G    + +   G+VY +G N  GQLG G    +  P  
Sbjct: 217 NQPTPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTP-- 274

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE-G 456
               +L+ +  + V+CG  HT V+ D+G+V+ WG N YGQLG G+  +++ P+ VT+E  
Sbjct: 275 CRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKD 334

Query: 457 CVPRNVACGWWHT 469
            +    AC   HT
Sbjct: 335 RIIEIAACHSTHT 347



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 109/231 (47%), Gaps = 30/231 (12%)

Query: 203 SGDENLSAFPCLVTLN-PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +G  N    PC ++ N    ++  VA G  H+L L+  G+V+ WGY   GQ+G GS +  
Sbjct: 159 NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ 218

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
            +      C+++                            V  IACG      + D+G +
Sbjct: 219 PTPRRVTGCLQN--------------------------KVVVTIACGQMCCMAVVDSGEV 252

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             +G+   GQ G G++ ++ +P  V++L GI+++ VA G  HT+ ++ +G VYA+G N +
Sbjct: 253 YVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSY 312

Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           GQLGTG    ++ P  +       +  +  +C + HT A     G V+ WG
Sbjct: 313 GQLGTGNKSNQSYPTPVTVEKDRII--EIAACHSTHTSAAKTQGGHVYMWG 361



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 15/111 (13%)

Query: 370 DGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFC 429
           + +++  G N  G LG G  Q+   PR LD+ S + +   S   G  H  +   +G+VF 
Sbjct: 90  NDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGP-HIVLATTEGEVFT 148

Query: 430 WGWNKYGQLGLGDV--------IDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           WG N Y QLG G          I  N+ ++  IE      VACG +H+L+L
Sbjct: 149 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIE------VACGSYHSLVL 193



 Score = 38.9 bits (89), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 54/133 (40%), Gaps = 17/133 (12%)

Query: 14  VFMWGYL-PGALPQRSPILSPLVVRLP--LTVGSAWRDVCGGGCGFAMAISDSRKLITWG 70
           VF WGY   G +   S +  P   R+   L         CG  C   MA+ DS ++  WG
Sbjct: 199 VFAWGYNNSGQVGSGSTVNQPTPRRVTGCLQNKVVVTIACGQMC--CMAVVDSGEVYVWG 256

Query: 71  STDDLGQSYVTSGKHGEIPEPFPLPTEASI--VKAAAGWAHCVAVTEGGEVYTWGWKECV 128
                G   +  G  G  P P  +     I   + A G+AH + +T+ G+VY WG     
Sbjct: 257 YN---GNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG----- 308

Query: 129 PSGRVFGDLSTGT 141
                +G L TG 
Sbjct: 309 --ANSYGQLGTGN 319


>gi|351711669|gb|EHB14588.1| Putative E3 ubiquitin-protein ligase HERC6 [Heterocephalus glaber]
          Length = 895

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 98/200 (49%), Gaps = 32/200 (16%)

Query: 234 LALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGP 293
           +ALS  G V+ WG    GQLGLG                              + N++ P
Sbjct: 1   MALSMSGNVYSWGGNDCGQLGLGH-----------------------------TKNTDSP 31

Query: 294 GF-RVPGNY-VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
               VP N  V+ +ACGG H+A++T  G + TFG G +GQ G  ST +EL P  V+ L G
Sbjct: 32  SLVEVPDNQKVECVACGGAHTALLTQDGLMFTFGAGKHGQLGHNSTKNELRPCLVTELSG 91

Query: 352 IQIEGVAAGLWHTICISSDGDVY-AFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
            ++  +A G WHT+  +SD DV+ +FG  + GQLG GG   + +P  + +PS E++  +S
Sbjct: 92  NRVTQIACGRWHTLAYASDLDVFSSFGFGEEGQLGNGGKHNQLIPLPMKSPSNEDLQFES 151

Query: 411 VSCGARHTAVIADDGKVFCW 430
              G     +   +  +  W
Sbjct: 152 HHSGKELIIIAGGNQSILLW 171



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/110 (39%), Positives = 62/110 (56%), Gaps = 3/110 (2%)

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           + +S  G+VY++GGN  GQLG G  +    P L++ P  +N   + V+CG  HTA++  D
Sbjct: 1   MALSMSGNVYSWGGNDCGQLGLGHTKNTDSPSLVEVP--DNQKVECVACGGAHTALLTQD 58

Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLA 473
           G +F +G  K+GQLG     +   P  VT + G     +ACG WHTL  A
Sbjct: 59  GLMFTFGAGKHGQLGHNSTKNELRPCLVTELSGNRVTQIACGRWHTLAYA 108



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/121 (35%), Positives = 61/121 (50%), Gaps = 3/121 (2%)

Query: 330 GQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD 389
           GQ G G T +  SP+ V      ++E VA G  HT  ++ DG ++ FG  + GQLG    
Sbjct: 18  GQLGLGHTKNTDSPSLVEVPDNQKVECVACGGAHTALLTQDGLMFTFGAGKHGQLGHNST 77

Query: 390 QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVF-CWGWNKYGQLGLGDVIDRNI 448
           + E  P L+   S   V    ++CG  HT   A D  VF  +G+ + GQLG G   ++ I
Sbjct: 78  KNELRPCLVTELSGNRV--TQIACGRWHTLAYASDLDVFSSFGFGEEGQLGNGGKHNQLI 135

Query: 449 P 449
           P
Sbjct: 136 P 136



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 56/133 (42%), Gaps = 28/133 (21%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P LV +    ++  VA GG HT  L+  G ++ +G G  GQLG  S    +      PC+
Sbjct: 31  PSLVEVPDNQKVECVACGGAHTALLTQDGLMFTFGAGKHGQLGHNSTKNELR-----PCL 85

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHS-AVITDAGALLTFGWGLYG 330
            +                       + GN V  IACG  H+ A  +D     +FG+G  G
Sbjct: 86  VT----------------------ELSGNRVTQIACGRWHTLAYASDLDVFSSFGFGEEG 123

Query: 331 QCGQGSTDDELSP 343
           Q G G   ++L P
Sbjct: 124 QLGNGGKHNQLIP 136



 Score = 40.4 bits (93), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 66/156 (42%), Gaps = 34/156 (21%)

Query: 111 VAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSG 170
           +A++  G VY+WG  +C       G L  G   + D     S  L E    +     + G
Sbjct: 1   MALSMSGNVYSWGGNDC-------GQLGLGHTKNTD-----SPSLVEVPDNQKVECVACG 48

Query: 171 GTSSG---TDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRI 223
           G  +     DG     G+G+ G          Q   +S+  +      PCLVT   G R+
Sbjct: 49  GAHTALLTQDGLMFTFGAGKHG----------QLGHNSTKNELR----PCLVTELSGNRV 94

Query: 224 ATVAAGGRHTLAL-SDIGQVWGWGYGGEGQLGLGSR 258
             +A G  HTLA  SD+     +G+G EGQLG G +
Sbjct: 95  TQIACGRWHTLAYASDLDVFSSFGFGEEGQLGNGGK 130


>gi|226495691|ref|NP_001141854.1| uncharacterized protein LOC100273996 [Zea mays]
 gi|194706180|gb|ACF87174.1| unknown [Zea mays]
          Length = 391

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 87/295 (29%), Positives = 131/295 (44%), Gaps = 42/295 (14%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGL-------GSRIRMVSSPHPIPCI- 271
           G++I   A GG H LA+ D G  + WG    GQ G        G+R      P P  C  
Sbjct: 93  GLKIVQAAIGGWHCLAVDDNGHAYAWGGNEYGQCGEEPERKEDGTRALRRDIPTPQRCAP 152

Query: 272 -----ESSYGKDRSAALSR-------------GSVNSEGPGFRVPG-NYVKGIACGGRHS 312
                + + G   S  L++             G +       RV G   V+ IA G  H+
Sbjct: 153 KLKVRQVAAGGTHSVVLTQEGHVWTWGQPWPPGDIKQISTPVRVQGLEKVRVIAVGAFHN 212

Query: 313 AVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGD 372
             +T+ G L  +G   YGQ G G T     P  V  L  + +  +AAG WH+  ++  G+
Sbjct: 213 LALTEDGILWAWGNNEYGQLGTGDTQPRSHPIRVEGLSDLSLVDIAAGGWHSTALTIQGE 272

Query: 373 VYAFGGNQFGQLGTGGDQAETL-PRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWG 431
           VYA+G  + G+LG G D++  + P  ++  + E++    VSCG  H+  +  DG++F +G
Sbjct: 273 VYAWGRGEHGRLGFGDDKSSRMVPLKVELLAGEDI--VQVSCGGTHSVALTRDGRMFSYG 330

Query: 432 WNKYGQLGLGDVIDRNIPSQVTIEGCVPRN------------VACGWWHTLLLAV 474
              +G+LG G  +    P  V I+   P+             VACG  HTL + V
Sbjct: 331 RGDHGRLGYGRKLTTGQPMGVDIDLPPPKTRSSRDGQWQAKYVACGGRHTLAIVV 385



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 103/376 (27%), Positives = 148/376 (39%), Gaps = 56/376 (14%)

Query: 57  AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEG 116
           ++AI +  +L TWG        +    K    P P        IV+AA G  HC+AV + 
Sbjct: 53  SLAICEDGRLFTWGWNQRGTLGHPPKTKTESSPGPVHALAGLKIVQAAIGGWHCLAVDDN 112

Query: 117 GEVYTWGWKECVPSGRVFGDLSTGT-GLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSG 175
           G  Y WG  E    G        GT  L +D+   Q      + +P+ +V + + G   G
Sbjct: 113 GHAYAWGGNEYGQCGEEPERKEDGTRALRRDIPTPQ------RCAPKLKVRQVAAG---G 163

Query: 176 TDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLA 235
           T      +EG             +    GD    + P  V     VR+  +A G  H LA
Sbjct: 164 THSVVLTQEGH-------VWTWGQPWPPGDIKQISTPVRVQGLEKVRV--IAVGAFHNLA 214

Query: 236 LSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF 295
           L++ G +W WG    GQLG G         HPI          R   LS  S+       
Sbjct: 215 LTEDGILWAWGNNEYGQLGTGD---TQPRSHPI----------RVEGLSDLSLVD----- 256

Query: 296 RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDELSPNCVSSLLGIQI 354
                    IA GG HS  +T  G +  +G G +G+ G G      + P  V  L G  I
Sbjct: 257 ---------IAAGGWHSTALTIQGEVYAWGRGEHGRLGFGDDKSSRMVPLKVELLAGEDI 307

Query: 355 EGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLD----APSLENV---- 406
             V+ G  H++ ++ DG ++++G    G+LG G       P  +D     P   +     
Sbjct: 308 VQVSCGGTHSVALTRDGRMFSYGRGDHGRLGYGRKLTTGQPMGVDIDLPPPKTRSSRDGQ 367

Query: 407 -HSKSVSCGARHTAVI 421
             +K V+CG RHT  I
Sbjct: 368 WQAKYVACGGRHTLAI 383



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 98/231 (42%), Gaps = 55/231 (23%)

Query: 299 GNY-VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDELSPNCVSSLLGIQIEG 356
           G+Y V  +  G R+S  I + G L T+GW   G  G    T  E SP  V +L G++I  
Sbjct: 39  GSYAVTAVVAGSRNSLAICEDGRLFTWGWNQRGTLGHPPKTKTESSPGPVHALAGLKIVQ 98

Query: 357 VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLD---------APSLE--- 404
            A G WH + +  +G  YA+GGN++GQ G   ++ E   R L          AP L+   
Sbjct: 99  AAIGGWHCLAVDDNGHAYAWGGNEYGQCGEEPERKEDGTRALRRDIPTPQRCAPKLKVRQ 158

Query: 405 ----NVHS------------------------------------KSVSCGARHTAVIADD 424
                 HS                                    + ++ GA H   + +D
Sbjct: 159 VAAGGTHSVVLTQEGHVWTWGQPWPPGDIKQISTPVRVQGLEKVRVIAVGAFHNLALTED 218

Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLAV 474
           G ++ WG N+YGQLG GD   R+ P +V  +      ++A G WH+  L +
Sbjct: 219 GILWAWGNNEYGQLGTGDTQPRSHPIRVEGLSDLSLVDIAAGGWHSTALTI 269



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 80/168 (47%), Gaps = 18/168 (10%)

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
           A A+L +G G  GQ G G  +++   +CV +L    +  V AG  +++ I  DG ++ +G
Sbjct: 7   ATAVLAWGSGEDGQLGMGGNEEKDWAHCVEALGSYAVTAVVAGSRNSLAICEDGRLFTWG 66

Query: 378 GNQFGQLGT-GGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYG 436
            NQ G LG     + E+ P  + A  L  +     + G  H   + D+G  + WG N+YG
Sbjct: 67  WNQRGTLGHPPKTKTESSPGPVHA--LAGLKIVQAAIGGWHCLAVDDNGHAYAWGGNEYG 124

Query: 437 QLGL--------GDVIDRNIPSQVTIEGCVP----RNVACGWWHTLLL 472
           Q G            + R+IP   T + C P    R VA G  H+++L
Sbjct: 125 QCGEEPERKEDGTRALRRDIP---TPQRCAPKLKVRQVAAGGTHSVVL 169



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 73/277 (26%), Positives = 110/277 (39%), Gaps = 58/277 (20%)

Query: 47  RDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAG 106
           R V  GG   ++ ++    + TWG            G   +I  P  +     +   A G
Sbjct: 157 RQVAAGGT-HSVVLTQEGHVWTWGQP-------WPPGDIKQISTPVRVQGLEKVRVIAVG 208

Query: 107 WAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVS 166
             H +A+TE G ++ WG  E       +G L TG     D   R      E +S  S V 
Sbjct: 209 AFHNLALTEDGILWAWGNNE-------YGQLGTG-----DTQPRSHPIRVEGLSDLSLVD 256

Query: 167 RSSGG---TSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
            ++GG   T+    G     G GE G    R+             D++    P  V L  
Sbjct: 257 IAAGGWHSTALTIQGEVYAWGRGEHG----RLGFGD---------DKSSRMVPLKVELLA 303

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPC-IESSYGKD 278
           G  I  V+ GG H++AL+  G+++ +G G  G+LG G   R +++  P+   I+    K 
Sbjct: 304 GEDIVQVSCGGTHSVALTRDGRMFSYGRGDHGRLGYG---RKLTTGQPMGVDIDLPPPKT 360

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVI 315
           RS+              R      K +ACGGRH+  I
Sbjct: 361 RSS--------------RDGQWQAKYVACGGRHTLAI 383


>gi|30695429|ref|NP_199644.2| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|26450138|dbj|BAC42188.1| regulator of chromosome condensation like [Arabidopsis thaliana]
 gi|28973207|gb|AAO63928.1| putative regulator of chromosome condensation (cell cycle
           regulatory protein) [Arabidopsis thaliana]
 gi|332008269|gb|AED95652.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 455

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 114/405 (28%), Positives = 179/405 (44%), Gaps = 58/405 (14%)

Query: 94  LPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSS 153
           LP++ S +  +AG  H +AVT  GE++ WG  +    GR+  D S  +  +    E    
Sbjct: 80  LPSDISSI--SAGHYHSLAVTSSGEIWAWGRNDEGQLGRIVIDSSRDSRSEPKRVEG--- 134

Query: 154 FLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESS-SSGDENLSAFP 212
              E V+ ++  +      + G DG       SKR ++ L     E+   S  ENL+A  
Sbjct: 135 --LENVNVQAAFASGVVSAAIGDDGSLWVWGRSKRGQLGLGNGIIEARVPSRVENLAAE- 191

Query: 213 CLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIE 272
                     +  V+ G  H LAL+  G+V+GWGY  +G++G       V  P     ++
Sbjct: 192 ---------HVVKVSLGWGHALALTVDGKVFGWGYVADGRVG------NVGLPLEASLLD 236

Query: 273 SSYGKDRSAALSRGSVNSEGPGFRVP----------------------GNYVKGIACGGR 310
           S          + G +N E    +V                          V  IACG  
Sbjct: 237 SITDGSMKGHHAAGDLNLEAAEKKVVEAMSKENDMPIAWEPCLVEETCNEKVADIACGSD 296

Query: 311 HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
           HS ++   G LL+ G  +YGQ G+   D  + P  ++         +AAGL H++ I + 
Sbjct: 297 HSLILCHDGTLLSAGSNIYGQLGRSKQDLGMKPVDITE----SPISIAAGLGHSLAICNR 352

Query: 371 GD--VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVF 428
           G+  + ++G N+  QLG G  + E LPR  +    +     SVS G  H+  + + G+ +
Sbjct: 353 GERNILSWGWNRSRQLGRG--KPENLPR--EVEGFDGESPASVSAGRVHSLCVTEKGEAW 408

Query: 429 CWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
            WG  K G+LGLG   D   P  +  +EGCV + VA G+ H+L+L
Sbjct: 409 VWGCGKNGRLGLGSSSDEPEPMLLEDVEGCVLQAVA-GFDHSLIL 452



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 89/166 (53%), Gaps = 15/166 (9%)

Query: 321 LLTFGWGLYGQCGQGSTD------DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVY 374
           +++FG G  G  G  S+       D   P  VS+L    I  ++AG +H++ ++S G+++
Sbjct: 46  VMSFGDGNLGALGLSSSSIPGMGMDAYEPTVVSNLPS-DISSISAGHYHSLAVTSSGEIW 104

Query: 375 AFGGNQFGQLG----TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
           A+G N  GQLG         + + P+ ++   LENV+ ++       +A I DDG ++ W
Sbjct: 105 AWGRNDEGQLGRIVIDSSRDSRSEPKRVEG--LENVNVQAAFASGVVSAAIGDDGSLWVW 162

Query: 431 GWNKYGQLGLGD-VIDRNIPSQV-TIEGCVPRNVACGWWHTLLLAV 474
           G +K GQLGLG+ +I+  +PS+V  +       V+ GW H L L V
Sbjct: 163 GRSKRGQLGLGNGIIEARVPSRVENLAAEHVVKVSLGWGHALALTV 208



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 121/307 (39%), Gaps = 68/307 (22%)

Query: 208 LSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHP 267
           + A+   V  N    I++++AG  H+LA++  G++W WG   EGQLG     R+V     
Sbjct: 69  MDAYEPTVVSNLPSDISSISAGHYHSLAVTSSGEIWAWGRNDEGQLG-----RIV----- 118

Query: 268 IPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWG 327
              I+SS           G  N       V   +  G+      SA I D G+L  +G  
Sbjct: 119 ---IDSSRDSRSEPKRVEGLEN-----VNVQAAFASGVV-----SAAIGDDGSLWVWGRS 165

Query: 328 LYGQCGQGSTDDELS-PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
             GQ G G+   E   P+ V +L    +  V+ G  H + ++ DG V+ +G    G++G 
Sbjct: 166 KRGQLGLGNGIIEARVPSRVENLAAEHVVKVSLGWGHALALTVDGKVFGWGYVADGRVGN 225

Query: 387 GGDQAE-------------------------TLPRLLDAPSLE----------------N 405
            G   E                            ++++A S E                N
Sbjct: 226 VGLPLEASLLDSITDGSMKGHHAAGDLNLEAAEKKVVEAMSKENDMPIAWEPCLVEETCN 285

Query: 406 VHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACG 465
                ++CG+ H+ ++  DG +   G N YGQLG         P  +T     P ++A G
Sbjct: 286 EKVADIACGSDHSLILCHDGTLLSAGSNIYGQLGRSKQDLGMKPVDITES---PISIAAG 342

Query: 466 WWHTLLL 472
             H+L +
Sbjct: 343 LGHSLAI 349


>gi|449275747|gb|EMC84515.1| putative E3 ubiquitin-protein ligase HERC2 [Columba livia]
          Length = 4840

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/266 (30%), Positives = 127/266 (47%), Gaps = 30/266 (11%)

Query: 212 PCLVTLNPGVRIATVAA--GGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP 269
           P LV       I  +AA   G H LALS  G+V+ WG G  G+LG G  + +   P  I 
Sbjct: 485 PQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPL-EEPKMIS 543

Query: 270 CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
            +                           G +V  IACG  +SA IT  G L T+G G Y
Sbjct: 544 ALSGKQA----------------------GKHVVHIACGSTYSAAITAEGELYTWGRGNY 581

Query: 330 GQCGQGSTDDELSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTG 387
           G+ G GS++D+  P  V+ L G+++  V+  +G   T+ ++ +G V+++G   +G+LG G
Sbjct: 582 GRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 641

Query: 388 GDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
           G      P+L++   L+++    V CG++ +  +  DG+V+ WG     +LG G      
Sbjct: 642 GSDGCKTPKLIE--KLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVR 699

Query: 448 IPSQVT-IEGCVPRNVACGWWHTLLL 472
            P  +  ++G    +VA G  H L L
Sbjct: 700 YPKLLEGLKGKKVIDVAAGSTHCLAL 725



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 85/306 (27%), Positives = 130/306 (42%), Gaps = 80/306 (26%)

Query: 218  NPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
            N  V+   V +GGRH +AL+  G+V+ WG G +G+LG  SR+     P  I  +++   +
Sbjct: 3048 NYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIR 3106

Query: 278  DRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST 337
            D                          IACG  HSA IT +G L T+G G YG+ G G  
Sbjct: 3107 D--------------------------IACGSSHSAAITSSGELYTWGLGEYGRLGHGDN 3140

Query: 338  DDELSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLP 395
              +L P  V  LLG ++  VA G     T+ ++ +G V+++G   FG+LG GG +   +P
Sbjct: 3141 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIP 3200

Query: 396  RLLDAPSLE------------------------------------NVHSKS--------- 410
            + ++  + +                                    +VH +          
Sbjct: 3201 QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRG 3260

Query: 411  -----VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVAC 464
                 V+ GA H   + D G+V+ WG N +GQ G G       P+ V  +EG     VAC
Sbjct: 3261 KKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVAC 3320

Query: 465  GWWHTL 470
            G  H++
Sbjct: 3321 GSSHSV 3326



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 102/366 (27%), Positives = 143/366 (39%), Gaps = 83/366 (22%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V   +G  HC+A++  GEVY+WG  E         D   G G ++   +R    + E + 
Sbjct: 4047 VAVNSGGKHCLALSSEGEVYSWGEAE---------DGKLGHG-NRSPCDRPR--VIESLR 4094

Query: 161  PRSQVSRSSGGTSSG-TDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
                V  ++GG  S      G      K R   L          GD      P LV    
Sbjct: 4095 GIEVVDVAAGGAHSACITAAGDLFTWGKGRYGRLGH--------GDSEDQLKPKLVEALQ 4146

Query: 220  GVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
            G R+  +A  +G   TL L+D   VW WG G  G+LG G                   G 
Sbjct: 4147 GYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-------------------GS 4187

Query: 278  DRSAALSRGSVNSEGPGFRVPGNY-------VKGIACGGRHSAVITDAGALLTFG-WGLY 329
            D               G +VP          V  + CG + S  +T +GA+ T+  +  Y
Sbjct: 4188 D---------------GCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWQVFRDY 4232

Query: 330  GQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD 389
             + G GS D    P  V  L G ++  +A G  H +C + DG+VY +G N  GQLG G  
Sbjct: 4233 HRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTT 4292

Query: 390  QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIP 449
             A   PRL+ A  L+      V+CG+ HT           W  +K    G        +P
Sbjct: 4293 NAIQRPRLVAA--LQGKKINRVACGSAHT---------LAWSTSKPANAG-------KLP 4334

Query: 450  SQVTIE 455
            +QV +E
Sbjct: 4335 TQVPME 4340



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 108/401 (26%), Positives = 164/401 (40%), Gaps = 60/401 (14%)

Query: 53   GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
              G   A +   K+  WG  +D  Q     G   ++P      +  ++V+ A G     A
Sbjct: 2952 AAGLESAATIRTKVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 3010

Query: 113  VTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGT 172
            VT  G+VY  G      +GR+   +S+GT        RQ + L+  V  +  V+  SGG 
Sbjct: 3011 VTVEGKVYACGE---ATNGRLGLGISSGTV----PIPRQITALSNYVVKK--VAVHSGGR 3061

Query: 173  SS---GTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIAT 225
             +     DG+    G G++G         K    S  + D+     P L+      RI  
Sbjct: 3062 HAMALTVDGKVFSWGEGDDG---------KLGHFSRMNCDK-----PRLIEALKTKRIRD 3107

Query: 226  VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS-----RIRMVSSPHPIPCIESSYGKDRS 280
            +A G  H+ A++  G+++ WG G  G+LG G      + +MV        I+ + G   +
Sbjct: 3108 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3167

Query: 281  AALS---RGSVNSEGPG-------------------FRVPGNYVKGIACGGRHSAVITDA 318
              L+    G V S G G                    R+ G  V  I CG + S  +T +
Sbjct: 3168 QTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3227

Query: 319  GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            G + T+G G Y + G G+      P  V  L G +I  VA G  H + ++  G VYA+G 
Sbjct: 3228 GVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGD 3287

Query: 379  NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            N  GQ G G       P L+    LE      V+CG+ H+ 
Sbjct: 3288 NDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 3326



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 72/278 (25%), Positives = 128/278 (46%), Gaps = 54/278 (19%)

Query: 225  TVAAGGRHTLALSDIGQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAA 282
            T++AGG         G ++GWG+   GQLG   G+++++     P PC   +    R   
Sbjct: 3950 TLSAGGS--------GTIYGWGHNHRGQLGGIEGAKVKV-----PTPC--EALATLRPVQ 3994

Query: 283  LSRG-----SVNSEGPGF-------------------------RVPGNYVKGIAC--GGR 310
            L  G     +V ++G  +                          +   ++K +A   GG+
Sbjct: 3995 LIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGK 4054

Query: 311  HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
            H   ++  G + ++G    G+ G G+      P  + SL GI++  VAAG  H+ CI++ 
Sbjct: 4055 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACITAA 4114

Query: 371  GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGA--RHTAVIADDGKVF 428
            GD++ +G  ++G+LG G  + +  P+L++A  L+      ++CG+    T  + DD  V+
Sbjct: 4115 GDLFTWGKGRYGRLGHGDSEDQLKPKLVEA--LQGYRVIDIACGSGDAQTLCLTDDDTVW 4172

Query: 429  CWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
             WG   YG+LG G      +P ++ ++ G     V CG
Sbjct: 4173 SWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECG 4210



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 121/276 (43%), Gaps = 48/276 (17%)

Query: 205  DENLSAFPCLVT---------LNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG- 254
            DE+L+A P L +          N G  +   AAG      +    +V+ WG   + QLG 
Sbjct: 2921 DEDLAAVPFLASDNEEEDDDKANTGSLVRKKAAGLESAATIR--TKVFVWGLNDKDQLGG 2978

Query: 255  -LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSA 313
              GS+I++            S+ +  SA                  N V+ +A G +   
Sbjct: 2979 LKGSKIKV-----------PSFSETLSAL-----------------NVVQ-VAGGSKSLF 3009

Query: 314  VITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVA--AGLWHTICISSD 370
             +T  G +   G    G+ G G +   +  P  +++L    ++ VA  +G  H + ++ D
Sbjct: 3010 AVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVD 3069

Query: 371  GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
            G V+++G    G+LG         PRL++A  L+    + ++CG+ H+A I   G+++ W
Sbjct: 3070 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEA--LKTKRIRDIACGSSHSAAITSSGELYTW 3127

Query: 431  GWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACG 465
            G  +YG+LG GD   +  P  V +  G     VACG
Sbjct: 3128 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3163



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 93/217 (42%), Gaps = 38/217 (17%)

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
           SS D+ +   P LVT   G+++  V+  +G   TLA+++ GQVW WG G  G+LG G   
Sbjct: 588 SSEDQTI---PMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRG--- 641

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITD 317
                                     GS   + P    ++    +  + CG + S  +T 
Sbjct: 642 --------------------------GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTK 675

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
            G + T+G G   + G G+ +    P  +  L G ++  VAAG  H + ++ D +V+++G
Sbjct: 676 DGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWG 735

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
            N   Q         T P     P L+  H   ++CG
Sbjct: 736 SND--QCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 770



 Score = 43.1 bits (100), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 3/78 (3%)

Query: 48  DVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAA 105
           D+    CG  F++A++   ++ TWG  D+    + T  +H   P+         ++  AA
Sbjct: 659 DIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTE-EHVRYPKLLEGLKGKKVIDVAA 717

Query: 106 GWAHCVAVTEGGEVYTWG 123
           G  HC+A+TE  EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735



 Score = 40.8 bits (94), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 32/71 (45%)

Query: 53   GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
            G  F++A++ S  + TW    D  +    S  H   P          ++  A G  HCV 
Sbjct: 4210 GSQFSVALTKSGAVYTWQVFRDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4269

Query: 113  VTEGGEVYTWG 123
             TE GEVYTWG
Sbjct: 4270 CTEDGEVYTWG 4280


>gi|40018552|ref|NP_954515.1| RCC1 and BTB domain-containing protein 2 [Rattus norvegicus]
 gi|81885332|sp|Q6P798.1|RCBT2_RAT RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
           Full=Chromosome condensation 1-like; AltName:
           Full=Regulator of chromosome condensation and BTB
           domain-containing protein 2
 gi|38197422|gb|AAH61766.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Rattus norvegicus]
 gi|149049940|gb|EDM02264.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2, isoform CRA_b [Rattus norvegicus]
          Length = 551

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/166 (36%), Positives = 98/166 (59%), Gaps = 3/166 (1%)

Query: 309 GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS-LLGIQIEGVAAGLWHTICI 367
           G H  + T  G + T+G   Y Q G G+T+  L P  +S+ L   Q+  VA G +H++ +
Sbjct: 108 GPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVL 167

Query: 368 SSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKV 427
           +SDG+V+A+G N  GQ+G+G    + +PR +    L+N    S++CG   +  + D G+V
Sbjct: 168 TSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTG-CLQNKVVMSIACGQMCSMAVVDTGEV 226

Query: 428 FCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
           + WG+N  GQLGLG   ++  P +V  ++G   + VACG+ HTL+L
Sbjct: 227 YVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 272



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 124/253 (49%), Gaps = 31/253 (12%)

Query: 220 GVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
           G +IA+++ G G H +  +  G+V+ WG+    QLG G+     ++   +PC  S+    
Sbjct: 97  GKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGT-----TNHGLVPCHIST---- 147

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
                             +    V  +ACG  HS V+T  G +  +G+   GQ G GST 
Sbjct: 148 -----------------NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTA 190

Query: 339 DELSPNCVSSLLGIQI-EGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
           ++  P  V+  L  ++   +A G   ++ +   G+VY +G N  GQLG G    +  P  
Sbjct: 191 NQPIPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCR 250

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE-G 456
           + A  L+ +  + V+CG  HT V+ D+G+++ WG N YGQLG G+  +++ P+ V +E  
Sbjct: 251 VAA--LQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVEKD 308

Query: 457 CVPRNVACGWWHT 469
            +    AC   HT
Sbjct: 309 RIIEIAACHSAHT 321



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 115/233 (49%), Gaps = 34/233 (14%)

Query: 203 SGDENLSAFPCLVTLN-PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +G  N    PC ++ N    ++  VA G  H+L L+  G+V+ WGY   GQ+G GS    
Sbjct: 133 NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---- 188

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
            ++  PIP         R     +  V             V  IACG   S  + D G +
Sbjct: 189 -TANQPIP--------RRVTGCLQNKV-------------VMSIACGQMCSMAVVDTGEV 226

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             +G+   GQ G GS+ ++ +P  V++L GI+++ VA G  HT+ ++ +G +YA+G N +
Sbjct: 227 YVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSY 286

Query: 382 GQLGTGG--DQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           GQLGTG   +Q+   P +++   +  +     +C + HT A  +  G V+ WG
Sbjct: 287 GQLGTGNKSNQSYPTPVVVEKDRIIEI----AACHSAHTSAAKSQGGHVYMWG 335



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 55/111 (49%), Gaps = 15/111 (13%)

Query: 370 DGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFC 429
           + +++  G N  G LG G  Q+   PR LD+ + + + S S   G  H  +   DG+VF 
Sbjct: 64  NDEIFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGP-HIVLATTDGEVFT 122

Query: 430 WGWNKYGQLGLGDV--------IDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           WG N Y QLG G          I  N+ ++  IE      VACG +H+L+L
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIE------VACGSYHSLVL 167


>gi|58533115|gb|AAW78912.1| putative chromosome condensation factor [Triticum turgidum]
          Length = 882

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/171 (36%), Positives = 95/171 (55%), Gaps = 4/171 (2%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V  + CG RH++++T  G + T+G    G+ G G+ +D + P  V SL    I+ VA G 
Sbjct: 79  VYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNIDFVACGE 138

Query: 362 WHTICISSDGDVYAFGG--NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
           +HT  +++ G++Y +G   +  G LG G D    +PR +  P LE +    VSCG  HTA
Sbjct: 139 FHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGP-LEGLQIAYVSCGTWHTA 197

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
           +I   G++F +G   +G LG GD+   + P +V ++ G     VACG WHT
Sbjct: 198 LITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGLKTIAVACGVWHT 248



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 119/258 (46%), Gaps = 42/258 (16%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G++IA V+ G  HT  ++ +GQ++ +G G  G LG G  ++ +S P  +  +        
Sbjct: 183 GLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGD-LKSISCPREVESLS------- 234

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITD-----------AGALLTFGWGL 328
                              G     +ACG  H+A I +           AG L T+G G 
Sbjct: 235 -------------------GLKTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGD 275

Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGG 388
             + G G  +  L P CV+SL+      VA G   T+ +++ G V+  G + +GQLG   
Sbjct: 276 KHRLGHGDKEARLKPTCVASLIDYDFYRVACGHSLTVGLTTSGKVWTMGNSVYGQLGNLN 335

Query: 389 DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNI 448
                 P L++   + + H   ++CG+ H AV+    +VF WG    G+LG GD+ DR +
Sbjct: 336 SDGR--PCLVE-DKIASEHVLQIACGSYHVAVLTSRSEVFTWGKGANGRLGHGDIEDRKV 392

Query: 449 PSQV-TIEGCVPRNVACG 465
           P+ V  +     R++ACG
Sbjct: 393 PTTVEALRDRAVRHIACG 410



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 61/165 (36%), Gaps = 30/165 (18%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG-LGSRIRMV 262
           GD+     P  V          VA G   T+ L+  G+VW  G    GQLG L S  R  
Sbjct: 282 GDKEARLKPTCVASLIDYDFYRVACGHSLTVGLTTSGKVWTMGNSVYGQLGNLNSDGR-- 339

Query: 263 SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL 322
                 PC+                        ++   +V  IACG  H AV+T    + 
Sbjct: 340 ------PCLVED---------------------KIASEHVLQIACGSYHVAVLTSRSEVF 372

Query: 323 TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI 367
           T+G G  G+ G G  +D   P  V +L    +  +A G   T  I
Sbjct: 373 TWGKGANGRLGHGDIEDRKVPTTVEALRDRAVRHIACGANFTAAI 417


>gi|383456202|ref|YP_005370191.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
 gi|380729703|gb|AFE05705.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
          Length = 806

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 79/250 (31%), Positives = 114/250 (45%), Gaps = 31/250 (12%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS-SPHPIPCIES----------- 273
           ++A   HTLAL+  G VWGWGY   GQ  LG  + MV  +P P+P +             
Sbjct: 498 LSATAYHTLALAQDGTVWGWGYNDSGQ--LGDTVDMVRVTPAPLPGLTGVTALASGTYHS 555

Query: 274 ----------SYGKDRSAALSRGSVNSEGPGFRVPG-NYVKGIACGGRHSAVITDAGALL 322
                     ++G +    L  G+  S      VPG   V  +A    HS  +   G + 
Sbjct: 556 LALKQDGTVWAWGLNNLGQLGDGTTVSRTEQMPVPGLTDVTALAASTYHSLALKQDGTVW 615

Query: 323 TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFG 382
           T+G+   GQ G G+T   L+P  V  L G  +  +AAGL H++ +  DG V+A+G N  G
Sbjct: 616 TWGYNSSGQLGDGTTASRLTPAQVPGLTG--VSAIAAGLVHSLALKQDGTVWAWGRNTDG 673

Query: 383 QLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGD 442
           QLG G      +P  +    L  V   +++ G+ H+  +  DG  + WG N  GQLG   
Sbjct: 674 QLGNGAAVNSPVP--VQVQGLTGV--SAIAAGSYHSLALKQDGTAWSWGRNGTGQLGNET 729

Query: 443 VIDRNIPSQV 452
           +     P QV
Sbjct: 730 ITGSLTPVQV 739



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 122/264 (46%), Gaps = 34/264 (12%)

Query: 219 PGVR-IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES---- 273
           PG+  +  +A+G  H+LAL   G VW WG    GQLG G+ +   +   P+P +      
Sbjct: 540 PGLTGVTALASGTYHSLALKQDGTVWAWGLNNLGQLGDGTTVSR-TEQMPVPGLTDVTAL 598

Query: 274 -----------------SYGKDRSAALSRGSVNSEGPGFRVPG-NYVKGIACGGRHSAVI 315
                            ++G + S  L  G+  S     +VPG   V  IA G  HS  +
Sbjct: 599 AASTYHSLALKQDGTVWTWGYNSSGQLGDGTTASRLTPAQVPGLTGVSAIAAGLVHSLAL 658

Query: 316 TDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYA 375
              G +  +G    GQ G G+  +   P  V  L G  +  +AAG +H++ +  DG  ++
Sbjct: 659 KQDGTVWAWGRNTDGQLGNGAAVNSPVPVQVQGLTG--VSAIAAGSYHSLALKQDGTAWS 716

Query: 376 FGGNQFGQLGTGGDQAETLPRLLDAPSLENVHS-KSVSCGARHTAVIADDGKVFCWGWNK 434
           +G N  GQLG      ET+   L    ++ + +  +++ G  H+  +  DG V+ WG+N 
Sbjct: 717 WGRNGTGQLGN-----ETITGSLTPVQVQGLTAVTALAGGDAHSMALLRDGTVWTWGYNA 771

Query: 435 YGQLGLGDVIDRNIPSQVTIEGCV 458
            G+LG G  +DR  P  V ++G V
Sbjct: 772 EGELGDGTTLDRTAP--VRVQGLV 793



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 79/275 (28%), Positives = 121/275 (44%), Gaps = 32/275 (11%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI-RMVSSPHPIPCIESSYGKDRS 280
           R+  +AAGG H+L +   G    WG+ G GQLG G+ + R +  P  +  +  +     +
Sbjct: 442 RVTWIAAGGAHSLVVRQDGTADAWGHNGYGQLGDGTSVDRFLPGPVQVQGLTGATALSAT 501

Query: 281 A----ALSR------------GSVNSEGPGFRV-----PG-NYVKGIACGGRHSAVITDA 318
           A    AL++            G +       RV     PG   V  +A G  HS  +   
Sbjct: 502 AYHTLALAQDGTVWGWGYNDSGQLGDTVDMVRVTPAPLPGLTGVTALASGTYHSLALKQD 561

Query: 319 GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           G +  +G    GQ G G+T        V  L    +  +AA  +H++ +  DG V+ +G 
Sbjct: 562 GTVWAWGLNNLGQLGDGTTVSRTEQMPVPGL--TDVTALAASTYHSLALKQDGTVWTWGY 619

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQLG G   +   P     P L  V   +++ G  H+  +  DG V+ WG N  GQL
Sbjct: 620 NSSGQLGDGTTASRLTPA--QVPGLTGV--SAIAAGLVHSLALKQDGTVWAWGRNTDGQL 675

Query: 439 GLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
           G G  ++  +P QV  + G     +A G +H+L L
Sbjct: 676 GNGAAVNSPVPVQVQGLTGV--SAIAAGSYHSLAL 708



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 411 VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCV-PRNVACGWWHT 469
           ++ G  H+ V+  DG    WG N YGQLG G  +DR +P  V ++G      ++   +HT
Sbjct: 446 IAAGGAHSLVVRQDGTADAWGHNGYGQLGDGTSVDRFLPGPVQVQGLTGATALSATAYHT 505

Query: 470 LLLA 473
           L LA
Sbjct: 506 LALA 509



 Score = 38.9 bits (89), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 50/208 (24%), Positives = 81/208 (38%), Gaps = 36/208 (17%)

Query: 57  AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPE-----PFPLPTEASIVKAAAGWAHCV 111
           ++A+     + TWG        Y +SG+ G+        P  +P    +   AAG  H +
Sbjct: 605 SLALKQDGTVWTWG--------YNSSGQLGDGTTASRLTPAQVPGLTGVSAIAAGLVHSL 656

Query: 112 AVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG 171
           A+ + G V+ WG           G L  G  ++  V          QV   + VS  + G
Sbjct: 657 ALKQDGTVWAWG-------RNTDGQLGNGAAVNSPV--------PVQVQGLTGVSAIAAG 701

Query: 172 TSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGR 231
           +      +  G   S  R          +   G+E ++     V +     +  +A G  
Sbjct: 702 SYHSLALKQDGTAWSWGRN--------GTGQLGNETITGSLTPVQVQGLTAVTALAGGDA 753

Query: 232 HTLALSDIGQVWGWGYGGEGQLGLGSRI 259
           H++AL   G VW WGY  EG+LG G+ +
Sbjct: 754 HSMALLRDGTVWTWGYNAEGELGDGTTL 781


>gi|195014693|ref|XP_001984062.1| GH15214 [Drosophila grimshawi]
 gi|193897544|gb|EDV96410.1| GH15214 [Drosophila grimshawi]
          Length = 1052

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/254 (30%), Positives = 119/254 (46%), Gaps = 40/254 (15%)

Query: 219 PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYG 276
           P   +  +A G RHTL L+  G+V+  G     QLG  L S+ R +  P  + C+     
Sbjct: 34  PDSAVNQIACGHRHTLFLTASGKVYACGSNDYAQLGHELSSK-RPLQIPELVDCV----- 87

Query: 277 KDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGS 336
                                    +  IACG RHS  +T+ G +L++G    GQ G  S
Sbjct: 88  -------------------------ITQIACGSRHSMALTEWGQVLSWGDNECGQLGHAS 122

Query: 337 TDDELS-PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAE--- 392
             D +  P  V +L+   +  +A G  H++ ++  G++YA+G N +GQLG          
Sbjct: 123 DQDVVQLPKTVRALVSKTVVQIACGNNHSLALTCCGELYAWGSNIYGQLGVKTPSELGQC 182

Query: 393 TLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
             P LL   +L  +  ++++CG  H+ +I+    VF WG N  GQLGL D  +R  P+Q+
Sbjct: 183 NAPMLL--TTLLGIPVRAIACGGNHSFLISKSSAVFGWGRNNCGQLGLNDETNRAYPTQL 240

Query: 453 -TIEGCVPRNVACG 465
            T+     R VACG
Sbjct: 241 KTLRTLGVRFVACG 254



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 79/263 (30%), Positives = 123/263 (46%), Gaps = 38/263 (14%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI------PCIESSYG 276
           I  +A G RH++AL++ GQV  WG    GQLG  S   +V  P  +        ++ + G
Sbjct: 88  ITQIACGSRHSMALTEWGQVLSWGDNECGQLGHASDQDVVQLPKTVRALVSKTVVQIACG 147

Query: 277 KDRSAALS-----------------------RGSVNSEGPGFRVPGNYVKGIACGGRHSA 313
            + S AL+                        G  N+      + G  V+ IACGG HS 
Sbjct: 148 NNHSLALTCCGELYAWGSNIYGQLGVKTPSELGQCNAPMLLTTLLGIPVRAIACGGNHSF 207

Query: 314 VITDAGALLTFGWGLYGQCGQGSTDDELS---PNCVSSLLGIQIEGVAAGLWHTICISSD 370
           +I+ + A+  FGWG    CGQ   +DE +   P  + +L  + +  VA G   ++ ++++
Sbjct: 208 LISKSSAV--FGWG-RNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNE 264

Query: 371 GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFC 429
           G V+  G   +GQLG G    E LPR++    L       V+CG RHT A++   G+++ 
Sbjct: 265 GGVFTCGAGAYGQLGHGFCGNEMLPRMV--MELMGSTISQVACGNRHTLAMVPARGRIYG 322

Query: 430 WGWNKYGQLGLGDVIDRNIPSQV 452
           +G    GQLG  +    N+P  V
Sbjct: 323 FGLGSSGQLGTRNTKSLNLPQMV 345



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 105/379 (27%), Positives = 162/379 (42%), Gaps = 61/379 (16%)

Query: 30  ILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGE 87
           IL+P   ++P    SA   +  G     + ++ S K+   GS D   LG   ++S +  +
Sbjct: 24  ILTP--SKMPWQPDSAVNQIACGH-RHTLFLTASGKVYACGSNDYAQLGHE-LSSKRPLQ 79

Query: 88  IPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDV 147
           IPE      +  I + A G  H +A+TE G+V +WG  EC       G L  G   D+DV
Sbjct: 80  IPEL----VDCVITQIACGSRHSMALTEWGQVLSWGDNEC-------GQL--GHASDQDV 126

Query: 148 FERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGS----GEEGSKRRRISLAKQTAESSSS 203
            +   +        R+ VS++    + G +   +    GE  +    I         S  
Sbjct: 127 VQLPKTV-------RALVSKTVVQIACGNNHSLALTCCGELYAWGSNIYGQLGVKTPSEL 179

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
           G  N    P L+T   G+ +  +A GG H+  +S    V+GWG    GQLGL        
Sbjct: 180 GQCNA---PMLLTTLLGIPVRAIACGGNHSFLISKSSAVFGWGRNNCGQLGLNDE----- 231

Query: 264 SPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLT 323
                         +R+      ++ + G         V+ +ACG   S  +T+ G + T
Sbjct: 232 -------------TNRAYPTQLKTLRTLG---------VRFVACGDEFSVFLTNEGGVFT 269

Query: 324 FGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFGGNQFG 382
            G G YGQ G G   +E+ P  V  L+G  I  VA G  HT+  + + G +Y FG    G
Sbjct: 270 CGAGAYGQLGHGFCGNEMLPRMVMELMGSTISQVACGNRHTLAMVPARGRIYGFGLGSSG 329

Query: 383 QLGTGGDQAETLPRLLDAP 401
           QLGT   ++  LP+++  P
Sbjct: 330 QLGTRNTKSLNLPQMVIGP 348



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 109/242 (45%), Gaps = 42/242 (17%)

Query: 241 QVWGWGYGGEGQLGLG-SRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPG 299
           +++ WG    GQLGLG      + +P  +P                            P 
Sbjct: 2   ELYCWGNASHGQLGLGGIEDEQILTPSKMPW--------------------------QPD 35

Query: 300 NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS---PNCVSSLLGIQIEG 356
           + V  IACG RH+  +T +G +   G   Y Q G      ELS   P  +  L+   I  
Sbjct: 36  SAVNQIACGHRHTLFLTASGKVYACGSNDYAQLGH-----ELSSKRPLQIPELVDCVITQ 90

Query: 357 VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ-AETLPRLLDAPSLENVHSKSVSCGA 415
           +A G  H++ ++  G V ++G N+ GQLG   DQ    LP+ + A   + V    ++CG 
Sbjct: 91  IACGSRHSMALTEWGQVLSWGDNECGQLGHASDQDVVQLPKTVRALVSKTV--VQIACGN 148

Query: 416 RHTAVIADDGKVFCWGWNKYGQLGL---GDVIDRNIPSQVTIEGCVP-RNVACGWWHTLL 471
            H+  +   G+++ WG N YGQLG+    ++   N P  +T    +P R +ACG  H+ L
Sbjct: 149 NHSLALTCCGELYAWGSNIYGQLGVKTPSELGQCNAPMLLTTLLGIPVRAIACGGNHSFL 208

Query: 472 LA 473
           ++
Sbjct: 209 IS 210


>gi|58533120|gb|AAW78916.1| putative chromosome condensation factor [Triticum aestivum]
          Length = 907

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/171 (36%), Positives = 95/171 (55%), Gaps = 4/171 (2%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V  + CG RH++++T  G + T+G    G+ G G+ +D + P  V SL    I+ VA G 
Sbjct: 79  VYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNIDFVACGE 138

Query: 362 WHTICISSDGDVYAFGG--NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
           +HT  +++ G++Y +G   +  G LG G D    +PR +  P LE +    VSCG  HTA
Sbjct: 139 FHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGP-LEGLQIAYVSCGTWHTA 197

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
           +I   G++F +G   +G LG GD+   + P +V ++ G     VACG WHT
Sbjct: 198 LITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGLKTIAVACGVWHT 248



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 119/258 (46%), Gaps = 42/258 (16%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G++IA V+ G  HT  ++ +GQ++ +G G  G LG G  ++ +S P  +  +        
Sbjct: 183 GLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGD-LKSISCPREVESLS------- 234

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITD-----------AGALLTFGWGL 328
                              G     +ACG  H+A I +           AG L T+G G 
Sbjct: 235 -------------------GLKTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGD 275

Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGG 388
             + G G  +  L P CV+SL+      VA G   T+ +++ G V+  G + +GQLG   
Sbjct: 276 KHRLGHGDKEARLKPTCVASLIDYDFYRVACGHSLTVGLTTSGKVWTMGNSVYGQLGNLN 335

Query: 389 DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNI 448
                 P L++   + + H   ++CG+ H AV+    +VF WG    G+LG GD+ DR +
Sbjct: 336 SDGR--PCLVE-DKIASEHVLQIACGSYHVAVLTSRSEVFTWGKGANGRLGHGDIEDRKV 392

Query: 449 PSQV-TIEGCVPRNVACG 465
           P+ V  +     R++ACG
Sbjct: 393 PTTVEALRDRAVRHIACG 410



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 61/165 (36%), Gaps = 30/165 (18%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG-LGSRIRMV 262
           GD+     P  V          VA G   T+ L+  G+VW  G    GQLG L S  R  
Sbjct: 282 GDKEARLKPTCVASLIDYDFYRVACGHSLTVGLTTSGKVWTMGNSVYGQLGNLNSDGR-- 339

Query: 263 SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL 322
                 PC+                        ++   +V  IACG  H AV+T    + 
Sbjct: 340 ------PCLVED---------------------KIASEHVLQIACGSYHVAVLTSRSEVF 372

Query: 323 TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI 367
           T+G G  G+ G G  +D   P  V +L    +  +A G   T  I
Sbjct: 373 TWGKGANGRLGHGDIEDRKVPTTVEALRDRAVRHIACGANFTAAI 417


>gi|194864811|ref|XP_001971119.1| GG14780 [Drosophila erecta]
 gi|190652902|gb|EDV50145.1| GG14780 [Drosophila erecta]
          Length = 1058

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 91/290 (31%), Positives = 125/290 (43%), Gaps = 30/290 (10%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLG---SRIRMVSSPHPI 268
           P  +   P   +  VA G RHTL L+  G+V+  G     QLG      R  ++      
Sbjct: 31  PSQIPWTPDTAVEQVACGHRHTLFLTANGKVYACGSNDHSQLGHDLPTKRPLLIPELQDY 90

Query: 269 PCIESSYGKDRSAALSR-GSVNSEGPG-------------FRVP-------GNYVKGIAC 307
             I+ S G   S ALS  G V S G                ++P          V  IAC
Sbjct: 91  VIIQISCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIMQLPKVVRQLVSKTVVQIAC 150

Query: 308 GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNC---VSSLLGIQIEGVAAGLWHT 364
           G  HS  +T  G L ++G  +YGQ G  S  D    N    +++LLGI +  +A G  H+
Sbjct: 151 GNNHSLALTSCGELYSWGSNIYGQLGVNSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHS 210

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
             IS  G V+ +G N  GQLG   +     P  L   +L  +  + V+CG   +  + ++
Sbjct: 211 FLISKSGAVFGWGRNNCGQLGLNDETNRAYPTQL--KTLRTLGVRFVACGDEFSVFLTNE 268

Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLA 473
           G VF  G   YGQLG G   +  +P  V  + G     VACG  HTL L 
Sbjct: 269 GGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALV 318



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 84/276 (30%), Positives = 126/276 (45%), Gaps = 39/276 (14%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI--- 268
           P L+       I  ++ G RH+LALSD GQV  WG    GQLG  +   ++  P  +   
Sbjct: 81  PLLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIMQLPKVVRQL 140

Query: 269 ---PCIESSYGKDRSAALS------------RGSVNSEGPGFRVPGNY-----------V 302
                ++ + G + S AL+             G +    P      NY           +
Sbjct: 141 VSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPKDLTHCNYPLRLTTLLGIPL 200

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS---PNCVSSLLGIQIEGVAA 359
             IACGG HS +I+ +GA+  FGWG    CGQ   +DE +   P  + +L  + +  VA 
Sbjct: 201 AAIACGGNHSFLISKSGAV--FGWG-RNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVAC 257

Query: 360 GLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT- 418
           G   ++ ++++G V+  G   +GQLG G    E LPR++    L       V+CG RHT 
Sbjct: 258 GDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTL 315

Query: 419 AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI 454
           A++   G+V+ +G    GQLG        +P QV I
Sbjct: 316 ALVPSRGRVYAFGLGSSGQLGTRSTKSLMLP-QVVI 350



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 137/314 (43%), Gaps = 43/314 (13%)

Query: 89  PEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVF 148
           P   P   +  I++ + G  H +A+++ G+V +WG  +C       G L  G   DK++ 
Sbjct: 81  PLLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDNDC-------GQL--GHATDKEIM 131

Query: 149 ERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENL 208
             Q   +  Q+  ++ V  + G   S       GE  S    I         +S  D   
Sbjct: 132 --QLPKVVRQLVSKTVVQIACGNNHSLA-LTSCGELYSWGSNIY---GQLGVNSPKDLTH 185

Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
             +P  +T   G+ +A +A GG H+  +S  G V+GWG    GQLGL             
Sbjct: 186 CNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDE---------- 235

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL 328
                    +R+      ++ + G         V+ +ACG   S  +T+ G + T G G 
Sbjct: 236 --------TNRAYPTQLKTLRTLG---------VRFVACGDEFSVFLTNEGGVFTCGAGA 278

Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFGGNQFGQLGTG 387
           YGQ G G + +E+ P  V  L+G  I  VA G  HT+  + S G VYAFG    GQLGT 
Sbjct: 279 YGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTR 338

Query: 388 GDQAETLPRLLDAP 401
             ++  LP+++  P
Sbjct: 339 STKSLMLPQVVIGP 352



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 53/156 (33%), Positives = 80/156 (51%), Gaps = 22/156 (14%)

Query: 329 YGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
           +GQ G G  +DE  L+P+ +       +E VA G  HT+ ++++G VYA G N   QL  
Sbjct: 15  HGQLGLGGIEDEQILTPSQIPWTPDTAVEQVACGHRHTLFLTANGKVYACGSNDHSQL-- 72

Query: 387 GGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG------- 439
           G D     P L+  P L++     +SCG+RH+  ++D G+V  WG N  GQLG       
Sbjct: 73  GHDLPTKRPLLI--PELQDYVIIQISCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEI 130

Query: 440 --LGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
             L  V+ R + S+  ++      +ACG  H+L L 
Sbjct: 131 MQLPKVV-RQLVSKTVVQ------IACGNNHSLALT 159



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 80/326 (24%), Positives = 127/326 (38%), Gaps = 55/326 (16%)

Query: 24  LPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSG 83
           LP + P+L P +    +   S        G   ++A+SD  ++++WG  D     + T  
Sbjct: 76  LPTKRPLLIPELQDYVIIQISC-------GSRHSLALSDWGQVLSWGDNDCGQLGHATDK 128

Query: 84  KHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGL 143
           +  ++P+        ++V+ A G  H +A+T  GE+Y+WG         ++G L  G   
Sbjct: 129 EIMQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWG-------SNIYGQL--GVNS 179

Query: 144 DKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSS 203
            KD+           +      + + GG  S    +     G  R               
Sbjct: 180 PKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCG-------QLGL 232

Query: 204 GDENLSAFPC-LVTLNP-GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
            DE   A+P  L TL   GVR   VA G   ++ L++ G V+  G G  GQLG G     
Sbjct: 233 NDETNRAYPTQLKTLRTLGVRF--VACGDEFSVFLTNEGGVFTCGAGAYGQLGHG----- 285

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHS-AVITDAGA 320
            SS   +P +                         + G+ +  +ACG RH+ A++   G 
Sbjct: 286 FSSNEMLPRM----------------------VMELMGSTITQVACGNRHTLALVPSRGR 323

Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCV 346
           +  FG G  GQ G  ST   + P  V
Sbjct: 324 VYAFGLGSSGQLGTRSTKSLMLPQVV 349



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 56/112 (50%), Gaps = 11/112 (9%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           ++S  ++Y +G    GQLG GG + E +      P   +   + V+CG RHT  +  +GK
Sbjct: 1   MASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVEQVACGHRHTLFLTANGK 60

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQV-----TIEGCVPRNVACGWWHTLLLA 473
           V+  G N + QLG       ++P++       ++  V   ++CG  H+L L+
Sbjct: 61  VYACGSNDHSQLG------HDLPTKRPLLIPELQDYVIIQISCGSRHSLALS 106


>gi|326913714|ref|XP_003203179.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Meleagris
           gallopavo]
          Length = 4815

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/266 (30%), Positives = 130/266 (48%), Gaps = 30/266 (11%)

Query: 212 PCLVTLNPGVRIATVAA--GGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP 269
           P LV       I  +AA   G H LALS  G+V+ WG G  G+LG G  +     P   P
Sbjct: 461 PQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTV-----PLEEP 515

Query: 270 CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
            + S+    ++                  G +V  IACG  +SA IT  G L T+G G Y
Sbjct: 516 KLISALSGKQA------------------GKHVVHIACGSTYSAAITAEGELYTWGRGNY 557

Query: 330 GQCGQGSTDDELSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTG 387
           G+ G GS++D+  P  V+ L G+++  V+  +G   T+ ++ +G V+++G   +G+LG G
Sbjct: 558 GRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 617

Query: 388 GDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
           G      P+L++   L+++    V CG++ +  +  DG+V+ WG     +LG G      
Sbjct: 618 GSDGCKTPKLIE--KLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVR 675

Query: 448 IPSQVT-IEGCVPRNVACGWWHTLLL 472
            P  +  ++G    +VA G  H L L
Sbjct: 676 YPKLLEGLKGKKVIDVAAGSTHCLAL 701



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 130/306 (42%), Gaps = 80/306 (26%)

Query: 218  NPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
            N  V+   V +GGRH +AL+  G+++ WG G +G+LG  SR+     P  I  +++   +
Sbjct: 3024 NYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIR 3082

Query: 278  DRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST 337
            D                          IACG  HSA IT +G L T+G G YG+ G G  
Sbjct: 3083 D--------------------------IACGSSHSAAITSSGELYTWGLGEYGRLGHGDN 3116

Query: 338  DDELSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLP 395
              +L P  V  LLG ++  VA G     T+ ++ +G V+++G   FG+LG GG +   +P
Sbjct: 3117 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIP 3176

Query: 396  RLLDAPSLE------------------------------------NVHSKS--------- 410
            + ++  + +                                    +VH +          
Sbjct: 3177 QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRG 3236

Query: 411  -----VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVAC 464
                 V+ GA H   + D G+V+ WG N +GQ G G       P+ V  +EG     VAC
Sbjct: 3237 KKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVAC 3296

Query: 465  GWWHTL 470
            G  H++
Sbjct: 3297 GSSHSV 3302



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 144/365 (39%), Gaps = 82/365 (22%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V   +G  HC+A++  GEVY+WG  E         D   G G ++   +R    + E + 
Sbjct: 4023 VAVNSGGKHCLALSSEGEVYSWGEAE---------DGKLGHG-NRSPCDRPR--VIESLR 4070

Query: 161  PRSQVSRSSGGTSSG-TDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
                V  ++GG  S      G      K R   L          GD      P LV    
Sbjct: 4071 GIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGH--------GDSEDQLKPKLVEALQ 4122

Query: 220  GVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
            G R+  +A  +G   TL L+D   VW WG G  G+LG G                   G 
Sbjct: 4123 GYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-------------------GS 4163

Query: 278  DRSAALSRGSVNSEGPGFRVPGNY-------VKGIACGGRHSAVITDAGALLTFGWGLYG 330
            D               G +VP          V  + CG + S  +T +GA+ T+G G Y 
Sbjct: 4164 D---------------GCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4208

Query: 331  QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            + G GS D    P  V  L G ++  +A G  H +C + DG+VY +G N  GQLG G   
Sbjct: 4209 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTN 4268

Query: 391  AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
            A   PRL+ A  L+      V+CG+ HT           W  +K    G        +P+
Sbjct: 4269 AIQRPRLVAA--LQGKKINRVACGSAHT---------LAWSTSKPANAG-------KLPT 4310

Query: 451  QVTIE 455
            QV +E
Sbjct: 4311 QVPME 4315



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 108/401 (26%), Positives = 164/401 (40%), Gaps = 60/401 (14%)

Query: 53   GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
              G   A +   K+  WG  +D  Q     G   ++P      +  ++V+ A G     A
Sbjct: 2928 AAGLESAATIRTKVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 2986

Query: 113  VTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGT 172
            VT  G+VY  G      +GR+   +S+GT        RQ + L+  V  +  V+  SGG 
Sbjct: 2987 VTVEGKVYACGE---ATNGRLGLGISSGTV----PIPRQITALSNYVVKK--VAVHSGGR 3037

Query: 173  SS---GTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIAT 225
             +     DG+    G G++G         K    S  + D+     P L+      RI  
Sbjct: 3038 HAMALTVDGKIFSWGEGDDG---------KLGHFSRMNCDK-----PRLIEALKTKRIRD 3083

Query: 226  VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS-----RIRMVSSPHPIPCIESSYGKDRS 280
            +A G  H+ A++  G+++ WG G  G+LG G      + +MV        I+ + G   +
Sbjct: 3084 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3143

Query: 281  AALS---RGSVNSEGPG-------------------FRVPGNYVKGIACGGRHSAVITDA 318
              L+    G V S G G                    R+ G  V  I CG + S  +T +
Sbjct: 3144 QTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3203

Query: 319  GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            G + T+G G Y + G G+      P  V  L G +I  VA G  H + ++  G VYA+G 
Sbjct: 3204 GVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGD 3263

Query: 379  NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            N  GQ G G       P L+    LE      V+CG+ H+ 
Sbjct: 3264 NDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 3302



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 128/278 (46%), Gaps = 54/278 (19%)

Query: 225  TVAAGGRHTLALSDIGQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAA 282
            T++AGG         G ++GWG+   GQLG   G+++++     P PC   +    R   
Sbjct: 3926 TLSAGGS--------GTIYGWGHNHRGQLGGIEGAKVKV-----PTPC--EALATLRPVQ 3970

Query: 283  LSRG-----SVNSEGPGF-------------------------RVPGNYVKGIAC--GGR 310
            L  G     +V ++G  +                          +   ++K +A   GG+
Sbjct: 3971 LIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGK 4030

Query: 311  HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
            H   ++  G + ++G    G+ G G+      P  + SL GI++  +AAG  H+ CI++ 
Sbjct: 4031 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAA 4090

Query: 371  GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGA--RHTAVIADDGKVF 428
            GD++ +G  ++G+LG G  + +  P+L++A  L+      ++CG+    T  + DD  V+
Sbjct: 4091 GDLFTWGKGRYGRLGHGDSEDQLKPKLVEA--LQGYRVIDIACGSGDAQTLCLTDDDTVW 4148

Query: 429  CWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
             WG   YG+LG G      +P ++ ++ G     V CG
Sbjct: 4149 SWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECG 4186



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 121/276 (43%), Gaps = 48/276 (17%)

Query: 205  DENLSAFPCLVT---------LNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG- 254
            DE+L+A P L +          N G  +   AAG      +    +V+ WG   + QLG 
Sbjct: 2897 DEDLAAVPFLASDNEEEDDDKANTGSLVRKKAAGLESAATIR--TKVFVWGLNDKDQLGG 2954

Query: 255  -LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSA 313
              GS+I++            S+ +  SA                  N V+ +A G +   
Sbjct: 2955 LKGSKIKV-----------PSFSETLSAL-----------------NVVQ-VAGGSKSLF 2985

Query: 314  VITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVA--AGLWHTICISSD 370
             +T  G +   G    G+ G G +   +  P  +++L    ++ VA  +G  H + ++ D
Sbjct: 2986 AVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVD 3045

Query: 371  GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
            G ++++G    G+LG         PRL++A  L+    + ++CG+ H+A I   G+++ W
Sbjct: 3046 GKIFSWGEGDDGKLGHFSRMNCDKPRLIEA--LKTKRIRDIACGSSHSAAITSSGELYTW 3103

Query: 431  GWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACG 465
            G  +YG+LG GD   +  P  V +  G     VACG
Sbjct: 3104 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3139



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 93/217 (42%), Gaps = 38/217 (17%)

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
           SS D+ +   P LVT   G+++  V+  +G   TLA+++ GQVW WG G  G+LG G   
Sbjct: 564 SSEDQTI---PMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRG--- 617

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITD 317
                                     GS   + P    ++    +  + CG + S  +T 
Sbjct: 618 --------------------------GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTK 651

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
            G + T+G G   + G G+ +    P  +  L G ++  VAAG  H + ++ D +V+++G
Sbjct: 652 DGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWG 711

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
            N   Q         T P     P L+  H   ++CG
Sbjct: 712 SND--QCQHFDTLRITKPEPAALPGLDTKHIVGIACG 746



 Score = 43.1 bits (100), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 3/78 (3%)

Query: 48  DVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAA 105
           D+    CG  F++A++   ++ TWG  D+    + T  +H   P+         ++  AA
Sbjct: 635 DIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTE-EHVRYPKLLEGLKGKKVIDVAA 693

Query: 106 GWAHCVAVTEGGEVYTWG 123
           G  HC+A+TE  EV++WG
Sbjct: 694 GSTHCLALTEDSEVHSWG 711



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 5/73 (6%)

Query: 53   GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
            G  F++A++ S  + TWG  D   LG     S  H   P          ++  A G  HC
Sbjct: 4186 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRRPRQVQGLQGKKVIAIATGSLHC 4242

Query: 111  VAVTEGGEVYTWG 123
            V  TE GEVYTWG
Sbjct: 4243 VCCTEDGEVYTWG 4255


>gi|328872836|gb|EGG21203.1| hypothetical protein DFA_01078 [Dictyostelium fasciculatum]
          Length = 413

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/262 (30%), Positives = 127/262 (48%), Gaps = 37/262 (14%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLG-SRIRMVSSPHPIPCIESSYGKDRSA 281
           +  VAAG  H+LAL   G +WGWG+  EGQL +  +R  ++  P  +      +    S+
Sbjct: 177 VVKVAAGWGHSLALDSEGSIWGWGWNAEGQLFVDPTRHPVLHRPTKV------FSSTSSS 230

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL 341
           +L                  V+ I CG  +SA ITD G +   G G +GQ G+G+T+   
Sbjct: 231 SL-----------------VVRDIICGSDYSAFITDKGHVYMVGSGEHGQLGRGNTEASA 273

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICIS-SDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
            P  V  L G +I+ VA G  H++ +    G +++ G N  GQLG G    +TL RL+  
Sbjct: 274 YPQIVQGLQGQRIDKVACGFGHSLLLDEQQGQLFSLGWNGNGQLGVG----DTLNRLVAT 329

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVID-RNIPSQVTIEGCV- 458
           P         +  G  H+A +  +G+ + WG  + G+LG G++     IP+Q+T      
Sbjct: 330 PVSMPDRVVLIGAGRAHSAAVLANGQFYTWGCARKGKLGSGNINGMETIPTQITEYDDTD 389

Query: 459 ------PRNVACGWWHTLLLAV 474
                 P +++CG+ HTL+  V
Sbjct: 390 DWPSKRPIDLSCGFDHTLVKVV 411



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 93/188 (49%), Gaps = 15/188 (7%)

Query: 300 NYVKGIACGGRHSAVITDAGALLTFGWGLYG---QCGQGSTDDELSPNCV--------SS 348
           N +K + CG  HS +I + G L T+GW  +    +  + +  +E SP  V        S 
Sbjct: 112 NDIKSLHCGHYHSMIINNKGELYTWGWSSFAGGEKENKETNYNEWSPRLVDEYVLDNDSI 171

Query: 349 LLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPR---LLDAPSLEN 405
           L    +  VAAG  H++ + S+G ++ +G N  GQL     +   L R   +  + S  +
Sbjct: 172 LQSRDVVKVAAGWGHSLALDSEGSIWGWGWNAEGQLFVDPTRHPVLHRPTKVFSSTSSSS 231

Query: 406 VHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVAC 464
           +  + + CG+ ++A I D G V+  G  ++GQLG G+      P  V  ++G     VAC
Sbjct: 232 LVVRDIICGSDYSAFITDKGHVYMVGSGEHGQLGRGNTEASAYPQIVQGLQGQRIDKVAC 291

Query: 465 GWWHTLLL 472
           G+ H+LLL
Sbjct: 292 GFGHSLLL 299



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 83/312 (26%), Positives = 126/312 (40%), Gaps = 70/312 (22%)

Query: 47  RDVCGGGCGF--AMAISDSRKLITWG-STDDLGQSYVTSGKHGE----IPEPFPLPTEA- 98
            D+    CG   +M I++  +L TWG S+   G+       + E    + + + L  ++ 
Sbjct: 112 NDIKSLHCGHYHSMIINNKGELYTWGWSSFAGGEKENKETNYNEWSPRLVDEYVLDNDSI 171

Query: 99  ----SIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDK--DVFERQS 152
                +VK AAGW H +A+   G ++ WGW      G++F D +    L +   VF   S
Sbjct: 172 LQSRDVVKVAAGWGHSLALDSEGSIWGWGWN---AEGQLFVDPTRHPVLHRPTKVFSSTS 228

Query: 153 SFLTEQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENL 208
           S     +  R  +  S         G     GSGE G   R              G+   
Sbjct: 229 S---SSLVVRDIICGSDYSAFITDKGHVYMVGSGEHGQLGR--------------GNTEA 271

Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSD-IGQVWGWGYGGEGQLGLGSRI-RMVSSPH 266
           SA+P +V    G RI  VA G  H+L L +  GQ++  G+ G GQLG+G  + R+V++P 
Sbjct: 272 SAYPQIVQGLQGQRIDKVACGFGHSLLLDEQQGQLFSLGWNGNGQLGVGDTLNRLVATPV 331

Query: 267 PIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGW 326
            +P        DR                      V  I  G  HSA +   G   T+G 
Sbjct: 332 SMP--------DR----------------------VVLIGAGRAHSAAVLANGQFYTWGC 361

Query: 327 GLYGQCGQGSTD 338
              G+ G G+ +
Sbjct: 362 ARKGKLGSGNIN 373


>gi|356991167|ref|NP_001239305.1| E3 ubiquitin-protein ligase HERC2 [Gallus gallus]
          Length = 4839

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/266 (30%), Positives = 130/266 (48%), Gaps = 30/266 (11%)

Query: 212 PCLVTLNPGVRIATVAA--GGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP 269
           P LV       I  +AA   G H LALS  G+V+ WG G  G+LG G  +     P   P
Sbjct: 485 PQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTV-----PLEEP 539

Query: 270 CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
            + S+    ++                  G +V  IACG  +SA IT  G L T+G G Y
Sbjct: 540 KLISALSGKQA------------------GKHVVHIACGSTYSAAITAEGELYTWGRGNY 581

Query: 330 GQCGQGSTDDELSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTG 387
           G+ G GS++D+  P  V+ L G+++  V+  +G   T+ ++ +G V+++G   +G+LG G
Sbjct: 582 GRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 641

Query: 388 GDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
           G      P+L++   L+++    V CG++ +  +  DG+V+ WG     +LG G      
Sbjct: 642 GSDGCKTPKLIE--KLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVR 699

Query: 448 IPSQVT-IEGCVPRNVACGWWHTLLL 472
            P  +  ++G    +VA G  H L L
Sbjct: 700 YPKLLEGLKGKKVIDVAAGSTHCLAL 725



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 130/306 (42%), Gaps = 80/306 (26%)

Query: 218  NPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
            N  V+   V +GGRH +AL+  G+++ WG G +G+LG  SR+     P  I  +++   +
Sbjct: 3048 NYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIR 3106

Query: 278  DRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST 337
            D                          IACG  HSA IT +G L T+G G YG+ G G  
Sbjct: 3107 D--------------------------IACGSSHSAAITSSGELYTWGLGEYGRLGHGDN 3140

Query: 338  DDELSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLP 395
              +L P  V  LLG ++  VA G     T+ ++ +G V+++G   FG+LG GG +   +P
Sbjct: 3141 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIP 3200

Query: 396  RLLDAPSLE------------------------------------NVHSKS--------- 410
            + ++  + +                                    +VH +          
Sbjct: 3201 QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRG 3260

Query: 411  -----VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVAC 464
                 V+ GA H   + D G+V+ WG N +GQ G G       P+ V  +EG     VAC
Sbjct: 3261 KKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVAC 3320

Query: 465  GWWHTL 470
            G  H++
Sbjct: 3321 GSSHSV 3326



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 144/365 (39%), Gaps = 82/365 (22%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V   +G  HC+A++  GEVY+WG  E         D   G G ++   +R    + E + 
Sbjct: 4047 VAVNSGGKHCLALSSEGEVYSWGEAE---------DGKLGHG-NRSPCDRPR--VIESLR 4094

Query: 161  PRSQVSRSSGGTSSG-TDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
                V  ++GG  S      G      K R   L          GD      P LV    
Sbjct: 4095 GIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGH--------GDSEDQLKPKLVEALQ 4146

Query: 220  GVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
            G R+  +A  +G   TL L+D   VW WG G  G+LG G                   G 
Sbjct: 4147 GYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-------------------GS 4187

Query: 278  DRSAALSRGSVNSEGPGFRVPGNY-------VKGIACGGRHSAVITDAGALLTFGWGLYG 330
            D               G +VP          V  + CG + S  +T +GA+ T+G G Y 
Sbjct: 4188 D---------------GCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4232

Query: 331  QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            + G GS D    P  V  L G ++  +A G  H +C + DG+VY +G N  GQLG G   
Sbjct: 4233 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTN 4292

Query: 391  AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
            A   PRL+ A  L+      V+CG+ HT           W  +K    G        +P+
Sbjct: 4293 AIQRPRLVAA--LQGKKINRVACGSAHT---------LAWSTSKPANAG-------KLPT 4334

Query: 451  QVTIE 455
            QV +E
Sbjct: 4335 QVPME 4339



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 108/401 (26%), Positives = 164/401 (40%), Gaps = 60/401 (14%)

Query: 53   GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
              G   A +   K+  WG  +D  Q     G   ++P      +  ++V+ A G     A
Sbjct: 2952 AAGLESAATIRTKVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 3010

Query: 113  VTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGT 172
            VT  G+VY  G      +GR+   +S+GT        RQ + L+  V  +  V+  SGG 
Sbjct: 3011 VTVEGKVYACGE---ATNGRLGLGISSGTV----PIPRQITALSNYVVKK--VAVHSGGR 3061

Query: 173  SS---GTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIAT 225
             +     DG+    G G++G         K    S  + D+     P L+      RI  
Sbjct: 3062 HAMALTVDGKIFSWGEGDDG---------KLGHFSRMNCDK-----PRLIEALKTKRIRD 3107

Query: 226  VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS-----RIRMVSSPHPIPCIESSYGKDRS 280
            +A G  H+ A++  G+++ WG G  G+LG G      + +MV        I+ + G   +
Sbjct: 3108 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3167

Query: 281  AALS---RGSVNSEGPG-------------------FRVPGNYVKGIACGGRHSAVITDA 318
              L+    G V S G G                    R+ G  V  I CG + S  +T +
Sbjct: 3168 QTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3227

Query: 319  GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            G + T+G G Y + G G+      P  V  L G +I  VA G  H + ++  G VYA+G 
Sbjct: 3228 GVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGD 3287

Query: 379  NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            N  GQ G G       P L+    LE      V+CG+ H+ 
Sbjct: 3288 NDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 3326



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/253 (26%), Positives = 118/253 (46%), Gaps = 53/253 (20%)

Query: 225  TVAAGGRHTLALSDIGQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAA 282
            T++AGG         G ++GWG+   GQLG   G+++++     P PC   +    R   
Sbjct: 3950 TLSAGGS--------GTIYGWGHNHRGQLGGIEGAKVKV-----PTPC--EALATLRPVQ 3994

Query: 283  LSRG-----SVNSEGPGF-------------------------RVPGNYVKGIAC--GGR 310
            L  G     +V ++G  +                          +   ++K +A   GG+
Sbjct: 3995 LIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGK 4054

Query: 311  HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
            H   ++  G + ++G    G+ G G+      P  + SL GI++  +AAG  H+ CI++ 
Sbjct: 4055 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAA 4114

Query: 371  GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGA--RHTAVIADDGKVF 428
            GD++ +G  ++G+LG G  + +  P+L++A  L+      ++CG+    T  + DD  V+
Sbjct: 4115 GDLFTWGKGRYGRLGHGDSEDQLKPKLVEA--LQGYRVIDIACGSGDAQTLCLTDDDTVW 4172

Query: 429  CWGWNKYGQLGLG 441
             WG   YG+LG G
Sbjct: 4173 SWGDGDYGKLGRG 4185



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 121/276 (43%), Gaps = 48/276 (17%)

Query: 205  DENLSAFPCLVT---------LNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG- 254
            DE+L+A P L +          N G  +   AAG      +    +V+ WG   + QLG 
Sbjct: 2921 DEDLAAVPFLASDNEEEDDDKANTGSLVRKKAAGLESAATIR--TKVFVWGLNDKDQLGG 2978

Query: 255  -LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSA 313
              GS+I++            S+ +  SA                  N V+ +A G +   
Sbjct: 2979 LKGSKIKV-----------PSFSETLSAL-----------------NVVQ-VAGGSKSLF 3009

Query: 314  VITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVA--AGLWHTICISSD 370
             +T  G +   G    G+ G G +   +  P  +++L    ++ VA  +G  H + ++ D
Sbjct: 3010 AVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVD 3069

Query: 371  GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
            G ++++G    G+LG         PRL++A  L+    + ++CG+ H+A I   G+++ W
Sbjct: 3070 GKIFSWGEGDDGKLGHFSRMNCDKPRLIEA--LKTKRIRDIACGSSHSAAITSSGELYTW 3127

Query: 431  GWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACG 465
            G  +YG+LG GD   +  P  V +  G     VACG
Sbjct: 3128 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3163



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 93/217 (42%), Gaps = 38/217 (17%)

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
           SS D+ +   P LVT   G+++  V+  +G   TLA+++ GQVW WG G  G+LG G   
Sbjct: 588 SSEDQTI---PMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRG--- 641

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITD 317
                                     GS   + P    ++    +  + CG + S  +T 
Sbjct: 642 --------------------------GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTK 675

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
            G + T+G G   + G G+ +    P  +  L G ++  VAAG  H + ++ D +V+++G
Sbjct: 676 DGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWG 735

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
            N   Q         T P     P L+  H   ++CG
Sbjct: 736 SND--QCQHFDTLRITKPEPAALPGLDTKHIVGIACG 770



 Score = 43.1 bits (100), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 3/78 (3%)

Query: 48  DVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAA 105
           D+    CG  F++A++   ++ TWG  D+    + T  +H   P+         ++  AA
Sbjct: 659 DIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTE-EHVRYPKLLEGLKGKKVIDVAA 717

Query: 106 GWAHCVAVTEGGEVYTWG 123
           G  HC+A+TE  EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 5/73 (6%)

Query: 53   GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
            G  F++A++ S  + TWG  D   LG     S  H   P          ++  A G  HC
Sbjct: 4210 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRRPRQVQGLQGKKVIAIATGSLHC 4266

Query: 111  VAVTEGGEVYTWG 123
            V  TE GEVYTWG
Sbjct: 4267 VCCTEDGEVYTWG 4279


>gi|242066354|ref|XP_002454466.1| hypothetical protein SORBIDRAFT_04g031600 [Sorghum bicolor]
 gi|241934297|gb|EES07442.1| hypothetical protein SORBIDRAFT_04g031600 [Sorghum bicolor]
          Length = 1003

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 113/426 (26%), Positives = 184/426 (43%), Gaps = 72/426 (16%)

Query: 59  AISDSRK-LITWGSTDDLGQSYVTSGKHGEIPEP---FPLPTEAS----IVKAAAGWAHC 110
           A +DS K +  WG  D LG+       HG +P      P   ++S    +   A G  H 
Sbjct: 191 AATDSLKDIFVWG--DVLGRM----SDHGHVPATNISLPRLLKSSQILNVQSIACGEKHA 244

Query: 111 VAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSG 170
             VT+ G+V++WG +    +G   G  ++ +  D  + +  +S      +P   ++  + 
Sbjct: 245 AIVTKQGQVFSWGEE----NGGRLGHKTSDSVSDPKIIDSLAS------TPVKTIAFGAK 294

Query: 171 GTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPC-LVTLNPGVRIATVAAG 229
            T + +      E G     +   K   + S         FP  L++ + G+ +  +A G
Sbjct: 295 YTCAVSVSGELYEWGEGIHSLGFGKNQCQRS-------PWFPHKLISTSDGISVLKIACG 347

Query: 230 GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVN 289
             HT  +S +G+++ +GYG  G LG G    +V   HP                      
Sbjct: 348 QWHTAIISSLGKLYTYGYGTFGVLGHGDTHSVV---HP---------------------- 382

Query: 290 SEGPGFRVPGNYVKGIACGGRHSAVITDA----------GALLTFGWGLYGQCGQGSTDD 339
            E    R  G+  K +ACG  H+A I +           G L T+G    G+ G  +   
Sbjct: 383 KEVESLR--GSRAKSVACGPWHTAAIVETSGTLKSSAPGGKLFTWGDAGGGKLGHTNKKS 440

Query: 340 ELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLD 399
           +L P  V SL+      V+ G+  T  ++  G V+  G  + GQLG       ++  +++
Sbjct: 441 KLVPTRVESLIDCDFTQVSCGMSLTAVLTITGVVFTIGSKEHGQLGNSRSDNTSIC-MVE 499

Query: 400 APSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCV 458
            P L+    K +SCG+ H AV+  +GKVF WG    GQLGLGD +DR+ P+ V  +E   
Sbjct: 500 GP-LKTEFVKDISCGSSHVAVLTMNGKVFTWGKGTEGQLGLGDYVDRSSPTLVEALEDKQ 558

Query: 459 PRNVAC 464
             ++AC
Sbjct: 559 VDSIAC 564


>gi|432889733|ref|XP_004075335.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Oryzias
           latipes]
          Length = 527

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/231 (30%), Positives = 107/231 (46%), Gaps = 30/231 (12%)

Query: 203 SGDENLSAFPCLVTLNP-GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +G  N    P LV+ N  G R+  VA G  HT+AL+  G+V+ WGY   GQ+G GS    
Sbjct: 109 NGTTNHGLTPALVSTNLLGKRVTEVACGSHHTIALTADGEVFAWGYNNSGQVGSGSTANQ 168

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
            +      C++S                            V  + CG   S  + D G +
Sbjct: 169 PTPRRVSSCLQSKV--------------------------VVNVGCGQLCSMAVLDNGEI 202

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             +G+   GQ G G+  ++ +P  +++L G+ +  VA G  HT+ ++ +G VYA+G N +
Sbjct: 203 YGWGYNCNGQLGLGNNGNQQTPCRIAALQGVNVVQVACGYAHTLALTDEGFVYAWGANSY 262

Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           GQLGTG    + LP L++      V  +  +C   HT A     G+V  WG
Sbjct: 263 GQLGTGNKSNQALPTLINTDKERMV--EVAACHTSHTSAAKTQSGQVLMWG 311



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 60/166 (36%), Positives = 98/166 (59%), Gaps = 3/166 (1%)

Query: 309 GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS-LLGIQIEGVAAGLWHTICI 367
           G H  + T  G +  +G   Y Q G G+T+  L+P  VS+ LLG ++  VA G  HTI +
Sbjct: 84  GPHVVIATADGEVFAWGHNGYSQLGNGTTNHGLTPALVSTNLLGKRVTEVACGSHHTIAL 143

Query: 368 SSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKV 427
           ++DG+V+A+G N  GQ+G+G    +  PR + +  L++    +V CG   +  + D+G++
Sbjct: 144 TADGEVFAWGYNNSGQVGSGSTANQPTPRRV-SSCLQSKVVVNVGCGQLCSMAVLDNGEI 202

Query: 428 FCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
           + WG+N  GQLGLG+  ++  P ++  ++G     VACG+ HTL L
Sbjct: 203 YGWGYNCNGQLGLGNNGNQQTPCRIAALQGVNVVQVACGYAHTLAL 248



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/268 (28%), Positives = 128/268 (47%), Gaps = 32/268 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMV 262
           GD   +  P  + +  G +I +++ G G H +  +  G+V+ WG+ G  QLG G+    +
Sbjct: 57  GDLQSTIEPRRIDVLCGKKIVSLSYGTGPHVVIATADGEVFAWGHNGYSQLGNGTTNHGL 116

Query: 263 SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL 322
           +     P + S+                      + G  V  +ACG  H+  +T  G + 
Sbjct: 117 T-----PALVST---------------------NLLGKRVTEVACGSHHTIALTADGEVF 150

Query: 323 TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE-GVAAGLWHTICISSDGDVYAFGGNQF 381
            +G+   GQ G GST ++ +P  VSS L  ++   V  G   ++ +  +G++Y +G N  
Sbjct: 151 AWGYNNSGQVGSGSTANQPTPRRVSSCLQSKVVVNVGCGQLCSMAVLDNGEIYGWGYNCN 210

Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
           GQLG G +  +  P  + A  L+ V+   V+CG  HT  + D+G V+ WG N YGQLG G
Sbjct: 211 GQLGLGNNGNQQTPCRIAA--LQGVNVVQVACGYAHTLALTDEGFVYAWGANSYGQLGTG 268

Query: 442 DVIDRNIPSQVTIEGCVPRNVACGWWHT 469
           +  ++ +P+ +  +    R V     HT
Sbjct: 269 NKSNQALPTLINTDK--ERMVEVAACHT 294



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 52/108 (48%), Gaps = 3/108 (2%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           ++ + +V+A G N  G LG G  Q+   PR +D    + + S S   G  H  +   DG+
Sbjct: 37  VTVNDEVFALGTNCSGCLGLGDLQSTIEPRRIDVLCGKKIVSLSYGTGP-HVVIATADGE 95

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPR--NVACGWWHTLLL 472
           VF WG N Y QLG G       P+ V+      R   VACG  HT+ L
Sbjct: 96  VFAWGHNGYSQLGNGTTNHGLTPALVSTNLLGKRVTEVACGSHHTIAL 143



 Score = 38.9 bits (89), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 13/131 (9%)

Query: 14  VFMWGYL-PGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCG--FAMAISDSRKLITWG 70
           VF WGY   G +   S    P   R+   + S  + V   GCG   +MA+ D+ ++  WG
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPTPRRVSSCLQS--KVVVNVGCGQLCSMAVLDNGEIYGWG 206

Query: 71  STDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPS 130
              + GQ  + +  + + P         ++V+ A G+AH +A+T+ G VY WG       
Sbjct: 207 YNCN-GQLGLGNNGNQQTPCRIAALQGVNVVQVACGYAHTLALTDEGFVYAWG------- 258

Query: 131 GRVFGDLSTGT 141
              +G L TG 
Sbjct: 259 ANSYGQLGTGN 269


>gi|334346980|ref|XP_001366466.2| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Monodelphis
           domestica]
          Length = 4706

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 125/255 (49%), Gaps = 29/255 (11%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           V+IA   + G H LAL+  G+V+ WG G  G+LG G  + +   P  I  +         
Sbjct: 497 VKIAA-HSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPL-EEPKMISALSGKQA---- 550

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                             G +V  IACG  +SA IT  G L T+G G YG+ G GS++D+
Sbjct: 551 ------------------GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQ 592

Query: 341 LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
             P  V+ L G+++  V+  +G   T+ ++ +G V+++G   +G+LG GG      P+L+
Sbjct: 593 TIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLI 652

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGC 457
           +   L+++    V CG++ +  +  DG+V+ WG     +LG G       P  +  ++G 
Sbjct: 653 E--KLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGK 710

Query: 458 VPRNVACGWWHTLLL 472
              +VA G  H L L
Sbjct: 711 KVVDVAAGSTHCLAL 725



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 85/306 (27%), Positives = 130/306 (42%), Gaps = 80/306 (26%)

Query: 218  NPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
            N  V+   V +GGRH +AL+  G+V+ WG G +G+LG  SR+     P  I  +++   +
Sbjct: 3045 NYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIR 3103

Query: 278  DRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST 337
            D                          IACG  HSA IT +G L T+G G YG+ G G  
Sbjct: 3104 D--------------------------IACGSSHSAAITSSGELYTWGLGEYGRLGHGDN 3137

Query: 338  DDELSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLP 395
              +L P  V  LLG ++  VA G     T+ ++ +G V+++G   FG+LG GG +   +P
Sbjct: 3138 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIP 3197

Query: 396  RLLDAPSLE------------------------------------NVHSKS--------- 410
            + ++  + +                                    +VH +          
Sbjct: 3198 QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRG 3257

Query: 411  -----VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVAC 464
                 V+ GA H   + D G+V+ WG N +GQ G G       P+ V  +EG     VAC
Sbjct: 3258 KKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVAC 3317

Query: 465  GWWHTL 470
            G  H++
Sbjct: 3318 GSSHSV 3323



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 102/245 (41%), Gaps = 61/245 (24%)

Query: 220  GVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
            G R+  +A  +G   TL L+D   VW WG G  G+LG G                   G 
Sbjct: 4014 GYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-------------------GS 4054

Query: 278  DRSAALSRGSVNSEGPGFRVPGNY-------VKGIACGGRHSAVITDAGALLTFGWGLYG 330
            D               G +VP          V  + CG + S  +T +GA+ T+G G Y 
Sbjct: 4055 D---------------GCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4099

Query: 331  QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            + G GS D    P  V  L G ++  +A G  H +C + DG+VY +G N  GQLG G   
Sbjct: 4100 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTN 4159

Query: 391  AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
            A   PRL+ A  L+      V+CG+ HT           W  +K    G        +P+
Sbjct: 4160 AIQRPRLVAA--LQGKKINRVACGSAHT---------LAWSTSKPANAG-------KLPT 4201

Query: 451  QVTIE 455
            QV +E
Sbjct: 4202 QVPME 4206



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 108/399 (27%), Positives = 164/399 (41%), Gaps = 60/399 (15%)

Query: 55   GFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVT 114
            G   A +   K+  WG  +D  Q     G   ++P      +  ++V+ A G     AVT
Sbjct: 2951 GLESAATIRTKVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT 3009

Query: 115  EGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSS 174
              G+VY  G      +GR+   +S+GT        RQ + L+  V  +  V+  SGG  +
Sbjct: 3010 VEGKVYACGE---ATNGRLGLGISSGTV----PIPRQITALSNYVVKK--VAVHSGGRHA 3060

Query: 175  ---GTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVA 227
                 DG+    G G++G         K    S  + D+     P L+      RI  +A
Sbjct: 3061 MALTVDGKVFSWGEGDDG---------KLGHFSRMNCDK-----PRLIEALKTKRIRDIA 3106

Query: 228  AGGRHTLALSDIGQVWGWGYGGEGQLGLGS-----RIRMVSSPHPIPCIESSYGKDRSAA 282
             G  H+ A++  G+++ WG G  G+LG G      + +MV        I+ + G   +  
Sbjct: 3107 CGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 3166

Query: 283  LS---RGSVNSEGPG-------------------FRVPGNYVKGIACGGRHSAVITDAGA 320
            L+    G V S G G                    R+ G  V  I CG + S  +T +G 
Sbjct: 3167 LALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGV 3226

Query: 321  LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
            + T+G G Y + G G+      P  V  L G +I  VA G  H + ++  G VYA+G N 
Sbjct: 3227 VWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDND 3286

Query: 381  FGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
             GQ G G       P L+    LE      V+CG+ H+ 
Sbjct: 3287 HGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 3323



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 121/276 (43%), Gaps = 48/276 (17%)

Query: 205  DENLSAFPCLVT---------LNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG- 254
            DE+L+A P L +          N G  I   ++G      +    +V+ WG   + QLG 
Sbjct: 2918 DEDLAAVPFLASDNEEEEDDKANTGSLIRKKSSGLESAATIR--TKVFVWGLNDKDQLGG 2975

Query: 255  -LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSA 313
              GS+I++            S+ +  SA                  N V+ +A G +   
Sbjct: 2976 LKGSKIKV-----------PSFSETLSAL-----------------NVVQ-VAGGSKSLF 3006

Query: 314  VITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVA--AGLWHTICISSD 370
             +T  G +   G    G+ G G +   +  P  +++L    ++ VA  +G  H + ++ D
Sbjct: 3007 AVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVD 3066

Query: 371  GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
            G V+++G    G+LG         PRL++A  L+    + ++CG+ H+A I   G+++ W
Sbjct: 3067 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEA--LKTKRIRDIACGSSHSAAITSSGELYTW 3124

Query: 431  GWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACG 465
            G  +YG+LG GD   +  P  V +  G     VACG
Sbjct: 3125 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3160



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 93/217 (42%), Gaps = 38/217 (17%)

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
           SS D+ +   P LVT   G+++  V+  +G   TLA+++ GQVW WG G  G+LG G   
Sbjct: 588 SSEDQTI---PMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRG--- 641

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITD 317
                                     GS   + P    ++    V  + CG + S  +T 
Sbjct: 642 --------------------------GSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTK 675

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
            G + ++G G   + G G+ +    P  +  L G ++  VAAG  H + ++ D +V+++G
Sbjct: 676 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVHSWG 735

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
            N   Q         T P     P L+  H   ++CG
Sbjct: 736 SND--QCQHFDTLRITKPEPTALPGLDTKHIVGIACG 770



 Score = 42.4 bits (98), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 3/78 (3%)

Query: 48  DVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAA 105
           DV    CG  F++A++   ++ +WG  D+    + T  +H   P+         +V  AA
Sbjct: 659 DVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVVDVAA 717

Query: 106 GWAHCVAVTEGGEVYTWG 123
           G  HC+A+TE  EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 5/73 (6%)

Query: 53   GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
            G  F++A++ S  + TWG  D   LG     S  H   P          ++  A G  HC
Sbjct: 4077 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRRPRQVQGLQGKKVIAIATGSLHC 4133

Query: 111  VAVTEGGEVYTWG 123
            V  TE GEVYTWG
Sbjct: 4134 VCCTEDGEVYTWG 4146


>gi|326490515|dbj|BAJ84921.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 419

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 123/266 (46%), Gaps = 48/266 (18%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLG-SRIRMVSSPHPIPCIESSYGKDRS 280
           ++  ++AG  H+ A++  G+++ WG    GQLGLG S  ++VS+P  +  +         
Sbjct: 120 KVVQISAGNHHSCAVTADGELFVWGKNSSGQLGLGKSAGKVVSTPRKVDYLADVR----- 174

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGS---- 336
                                VK  A G  HS V+T+ G  L++G    G+ G G     
Sbjct: 175 ---------------------VKMTALGSEHSIVVTEDGEALSWGAAGGGRLGHGHKSSF 213

Query: 337 -----TDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
                T +E +P  + +L GI+I+ +AAG+ H+ CI   G V+ FG      LG   D  
Sbjct: 214 LGFAMTSNEYTPRLIKNLDGIKIKRIAAGMLHSACIDEKGTVFIFGQKTEKVLGRSNDA- 272

Query: 392 ETLPRLLDAPSL--ENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIP 449
              PR    PS+  E   S+ V+CG  HT  + D G ++ WG N+ G LGLG       P
Sbjct: 273 ---PR----PSVVEEIQFSEEVACGGYHTCAVTDRGDLYSWGSNENGCLGLGGTGMVRFP 325

Query: 450 SQV--TIEGCVPRNVACGWWHTLLLA 473
             V  ++       V+CGW HT +++
Sbjct: 326 EVVSSSLFKLPVSKVSCGWKHTAVIS 351



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 103/383 (26%), Positives = 166/383 (43%), Gaps = 66/383 (17%)

Query: 106 GWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQV 165
           G AH + +TEGG V+  G  +       FG L  G+ +   +   + S   E+V   S  
Sbjct: 75  GGAHTLFLTEGGRVFATGLND-------FGQLGIGSSMPHTLDPVEVSGFHEKVVQISAG 127

Query: 166 SRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIAT 225
           +  S   ++  +    G+  S +  + L K   +  S+        P  V     VR+  
Sbjct: 128 NHHSCAVTADGELFVWGKNSSGQ--LGLGKSAGKVVST--------PRKVDYLADVRVKM 177

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR-----IRMVSSPHPIPCIESSYGKDRS 280
            A G  H++ +++ G+   WG  G G+LG G +       M S+ +    I++       
Sbjct: 178 TALGSEHSIVVTEDGEALSWGAAGGGRLGHGHKSSFLGFAMTSNEYTPRLIKN------- 230

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                           + G  +K IA G  HSA I + G +  FG       G+  ++D 
Sbjct: 231 ----------------LDGIKIKRIAAGMLHSACIDEKGTVFIFGQKTEKVLGR--SNDA 272

Query: 341 LSPNCVSSLLGIQI-EGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLD 399
             P+ V     IQ  E VA G +HT  ++  GD+Y++G N+ G LG GG      P ++ 
Sbjct: 273 PRPSVVEE---IQFSEEVACGGYHTCAVTDRGDLYSWGSNENGCLGLGGTGMVRFPEVVS 329

Query: 400 APSLENVHSKSVSCGARHTAVIADDGKVFCWGW------------NKYGQLGLGDVIDRN 447
           + SL  +    VSCG +HTAVI+ +  ++ WGW            +  GQLG G+ +D  
Sbjct: 330 S-SLFKLPVSKVSCGWKHTAVISGE-DIYTWGWGGANGTFFEEGHSSGGQLGHGNDVDYC 387

Query: 448 IPSQVTI-EGCVPRNVACGWWHT 469
            P  V + +     +V+CG+ HT
Sbjct: 388 EPMMVELHKNARAVHVSCGFNHT 410



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 115/441 (26%), Positives = 171/441 (38%), Gaps = 83/441 (18%)

Query: 11  ERVVFMWGYLP------GALPQR-SPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDS 63
            RV  +WG         GAL  R SP   P  +  P    ++    CGG     + +++ 
Sbjct: 30  RRVAALWGNGDHGRLGLGALESRWSPTACPFFLARPADPPASLS--CGGA--HTLFLTEG 85

Query: 64  RKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEAS-----IVKAAAGWAHCVAVTEGGE 118
            ++   G  +D GQ  + S     +P     P E S     +V+ +AG  H  AVT  GE
Sbjct: 86  GRVFATG-LNDFGQLGIGS----SMPHTLD-PVEVSGFHEKVVQISAGNHHSCAVTADGE 139

Query: 119 VYTWGWKEC--VPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSS-G 175
           ++ WG      +  G+  G + + T    D        +T   S  S V    G   S G
Sbjct: 140 LFVWGKNSSGQLGLGKSAGKVVS-TPRKVDYLADVRVKMTALGSEHSIVVTEDGEALSWG 198

Query: 176 TDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLA 235
             G G    G K   +  A  + E +          P L+    G++I  +AAG  H+  
Sbjct: 199 AAGGGRLGHGHKSSFLGFAMTSNEYT----------PRLIKNLDGIKIKRIAAGMLHSAC 248

Query: 236 LSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF 295
           + + G V+ +G   E  LG     R   +P P    E  + ++                 
Sbjct: 249 IDEKGTVFIFGQKTEKVLG-----RSNDAPRPSVVEEIQFSEE----------------- 286

Query: 296 RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCV-SSLLGIQI 354
                    +ACGG H+  +TD G L ++G    G  G G T     P  V SSL  + +
Sbjct: 287 ---------VACGGYHTCAVTDRGDLYSWGSNENGCLGLGGTGMVRFPEVVSSSLFKLPV 337

Query: 355 EGVAAGLWHTICISSDGDVYAFG-----GNQF-------GQLGTGGDQAETLPRLLDAPS 402
             V+ G  HT  IS + D+Y +G     G  F       GQLG G D     P +++   
Sbjct: 338 SKVSCGWKHTAVISGE-DIYTWGWGGANGTFFEEGHSSGGQLGHGNDVDYCEPMMVELH- 395

Query: 403 LENVHSKSVSCGARHTAVIAD 423
            +N  +  VSCG  HT  I +
Sbjct: 396 -KNARAVHVSCGFNHTGAILE 415



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 95/200 (47%), Gaps = 30/200 (15%)

Query: 245 WGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKG 304
           WG G  G+LGLG+ +    SP   P             L+R            P +    
Sbjct: 36  WGNGDHGRLGLGA-LESRWSPTACPFF-----------LAR------------PADPPAS 71

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDELSPNCVSSLLGIQIEGVAAGLWH 363
           ++CGG H+  +T+ G +   G   +GQ G GS+    L P  VS      ++ ++AG  H
Sbjct: 72  LSCGGAHTLFLTEGGRVFATGLNDFGQLGIGSSMPHTLDPVEVSGFHEKVVQ-ISAGNHH 130

Query: 364 TICISSDGDVYAFGGNQFGQLGTGGDQAETL--PRLLDAPSLENVHSKSVSCGARHTAVI 421
           +  +++DG+++ +G N  GQLG G    + +  PR +D   L +V  K  + G+ H+ V+
Sbjct: 131 SCAVTADGELFVWGKNSSGQLGLGKSAGKVVSTPRKVD--YLADVRVKMTALGSEHSIVV 188

Query: 422 ADDGKVFCWGWNKYGQLGLG 441
            +DG+   WG    G+LG G
Sbjct: 189 TEDGEALSWGAAGGGRLGHG 208


>gi|327273159|ref|XP_003221348.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Anolis
           carolinensis]
          Length = 1109

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 110/397 (27%), Positives = 174/397 (43%), Gaps = 63/397 (15%)

Query: 3   GEGQEEKME-----RVVFMWGYLPGALPQRSPILSPLVVRLPLTVGSAW-RDVCGGGCG- 55
           G+ QE K++     + +  WGY     P  S  + P+++  P T G    R V    CG 
Sbjct: 44  GKRQENKLDDFLKGKKMLCWGYWSFGYPGTSSTVQPIILE-PRTSGFIHERSVKEVACGG 102

Query: 56  -FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVT 114
             ++ + +  ++ T G  +  GQ  +   K G  PE      +  I+  A G +H +A++
Sbjct: 103 NHSIFLLEDGEVYTCG-VNTKGQ--LGHEKEGSKPEQIGALADQHIIHVACGESHSLALS 159

Query: 115 EGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG--- 171
           + G +++WG      +G   G L   T  D     R    L ++++    +  S G    
Sbjct: 160 DQGRLFSWG------AGSD-GQLGLTTTEDSVAVPR----LIKKLNQEMILQVSCGNWHC 208

Query: 172 TSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGR 231
            +   DG+      +   ++ L K+    +S         P  V    G+ +A VAAGG 
Sbjct: 209 LALAADGQFFAWGQNSHGQLGLGKEFPSQAS---------PQRVKSLDGIPLAQVAAGGA 259

Query: 232 HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
           H+ ALS  G V+GWG    GQLGL                     +DR +      + ++
Sbjct: 260 HSFALSLSGAVFGWGKNTSGQLGLSDE------------------QDRESPCHVKLLRTQ 301

Query: 292 GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
                     V  I+CG  H+AV+T  G + TFG G  GQ G  S +DE++P  V  L+G
Sbjct: 302 K---------VVYISCGSDHTAVLTKTGGVFTFGAGSCGQLGHDSFNDEVNPRRVLELMG 352

Query: 352 IQIEGVAAGLWHTIC-ISSDGDVYAFGGNQFGQLGTG 387
            ++  +A G  HT+  + S G +YAFG    GQLG+G
Sbjct: 353 SEVSQIACGRQHTLAFVPSSGLIYAFGCGIKGQLGSG 389



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 122/256 (47%), Gaps = 38/256 (14%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  VA GG H++ L + G+V+  G   +GQLG                    + K+ S  
Sbjct: 95  VKEVACGGNHSIFLLEDGEVYTCGVNTKGQLG--------------------HEKEGSKP 134

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
              G++  +         ++  +ACG  HS  ++D G L ++G G  GQ G  +T+D ++
Sbjct: 135 EQIGALADQ---------HIIHVACGESHSLALSDQGRLFSWGAGSDGQLGLTTTEDSVA 185

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD-QAETLPRLLDA 400
            P  +  L    I  V+ G WH + +++DG  +A+G N  GQLG G +  ++  P+    
Sbjct: 186 VPRLIKKLNQEMILQVSCGNWHCLALAADGQFFAWGQNSHGQLGLGKEFPSQASPQ--RV 243

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI---EGC 457
            SL+ +    V+ G  H+  ++  G VF WG N  GQLGL D  DR  P  V +   +  
Sbjct: 244 KSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNTSGQLGLSDEQDRESPCHVKLLRTQKV 303

Query: 458 VPRNVACGWWHTLLLA 473
           V   ++CG  HT +L 
Sbjct: 304 V--YISCGSDHTAVLT 317



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/180 (33%), Positives = 90/180 (50%), Gaps = 15/180 (8%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           VK +ACGG HS  + + G + T G    GQ G      +  P  + +L    I  VA G 
Sbjct: 95  VKEVACGGNHSIFLLEDGEVYTCGVNTKGQLGHEKEGSK--PEQIGALADQHIIHVACGE 152

Query: 362 WHTICISSDGDVYAFGGNQFGQLG-TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            H++ +S  G ++++G    GQLG T  + +  +PRL+   + E +    VSCG  H   
Sbjct: 153 SHSLALSDQGRLFSWGAGSDGQLGLTTTEDSVAVPRLIKKLNQEMI--LQVSCGNWHCLA 210

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV------TIEGCVPRNVACGWWHTLLLAV 474
           +A DG+ F WG N +GQLGLG    +  PSQ       +++G     VA G  H+  L++
Sbjct: 211 LAADGQFFAWGQNSHGQLGLG----KEFPSQASPQRVKSLDGIPLAQVAAGGAHSFALSL 266



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 80/261 (30%), Positives = 112/261 (42%), Gaps = 34/261 (13%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP------CIESSY 275
            I  VA G  H+LALSD G+++ WG G +GQLGL +    V+ P  I        ++ S 
Sbjct: 144 HIIHVACGESHSLALSDQGRLFSWGAGSDGQLGLTTTEDSVAVPRLIKKLNQEMILQVSC 203

Query: 276 GKDRSAALS---------RGSVNSEGPGFRVP------------GNYVKGIACGGRHSAV 314
           G     AL+         + S    G G   P            G  +  +A GG HS  
Sbjct: 204 GNWHCLALAADGQFFAWGQNSHGQLGLGKEFPSQASPQRVKSLDGIPLAQVAAGGAHSFA 263

Query: 315 ITDAGALLTFGWG--LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGD 372
           ++ +GA+  FGWG    GQ G     D  SP  V  L   ++  ++ G  HT  ++  G 
Sbjct: 264 LSLSGAV--FGWGKNTSGQLGLSDEQDRESPCHVKLLRTQKVVYISCGSDHTAVLTKTGG 321

Query: 373 VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           V+ FG    GQLG      E  PR      L       ++CG +HT A +   G ++ +G
Sbjct: 322 VFTFGAGSCGQLGHDSFNDEVNPR--RVLELMGSEVSQIACGRQHTLAFVPSSGLIYAFG 379

Query: 432 WNKYGQLGLGDVIDRNIPSQV 452
               GQLG G   +   PS V
Sbjct: 380 CGIKGQLGSGHTCNLKCPSPV 400



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 75/159 (47%), Gaps = 12/159 (7%)

Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G+  +G  G  ST     L P     +    ++ VA G  H+I +  DG+VY  G 
Sbjct: 60  MLCWGYWSFGYPGTSSTVQPIILEPRTSGFIHERSVKEVACGGNHSIFLLEDGEVYTCGV 119

Query: 379 NQFGQLG--TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYG 436
           N  GQLG    G + E +  L D       H   V+CG  H+  ++D G++F WG    G
Sbjct: 120 NTKGQLGHEKEGSKPEQIGALADQ------HIIHVACGESHSLALSDQGRLFSWGAGSDG 173

Query: 437 QLGLGDVIDR-NIPSQV-TIEGCVPRNVACGWWHTLLLA 473
           QLGL    D   +P  +  +   +   V+CG WH L LA
Sbjct: 174 QLGLTTTEDSVAVPRLIKKLNQEMILQVSCGNWHCLALA 212



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 79/313 (25%), Positives = 119/313 (38%), Gaps = 69/313 (22%)

Query: 39  PLTVGS-AWRDVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLP 95
           P  +G+ A + +    CG   ++A+SD  +L +WG+  D      T+     +P      
Sbjct: 134 PEQIGALADQHIIHVACGESHSLALSDQGRLFSWGAGSDGQLGLTTTEDSVAVPRLIKKL 193

Query: 96  TEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFL 155
            +  I++ + G  HC+A+   G+ + WG           G L    GL K+         
Sbjct: 194 NQEMILQVSCGNWHCLALAADGQFFAWGQNS-------HGQL----GLGKE--------F 234

Query: 156 TEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLA-------KQTAESSSSGDENL 208
             Q SP  Q  +S  G        G    G+    +SL+       K T+      DE  
Sbjct: 235 PSQASP--QRVKSLDGIPLAQVAAG----GAHSFALSLSGAVFGWGKNTSGQLGLSDEQD 288

Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
              PC V L    ++  ++ G  HT  L+  G V+ +G G  GQLG              
Sbjct: 289 RESPCHVKLLRTQKVVYISCGSDHTAVLTKTGGVFTFGAGSCGQLG-------------- 334

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFRV---PGNYVKGIACGGRHS-AVITDAGALLTF 324
                             S N E    RV    G+ V  IACG +H+ A +  +G +  F
Sbjct: 335 ----------------HDSFNDEVNPRRVLELMGSEVSQIACGRQHTLAFVPSSGLIYAF 378

Query: 325 GWGLYGQCGQGST 337
           G G+ GQ G G T
Sbjct: 379 GCGIKGQLGSGHT 391


>gi|6755348|ref|NP_035415.1| X-linked retinitis pigmentosa GTPase regulator isoform 3 [Mus
           musculus]
 gi|3258647|gb|AAC40190.1| retinitis pigmentosa GTPase regulator [Mus musculus]
          Length = 746

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 95/171 (55%), Gaps = 4/171 (2%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           ++CG  H+A++T    L  FG   +GQ G GS    + P C+ +L   +++  A G  HT
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 137

Query: 365 ICISSDGDVYAFGGNQFGQLGTGG-DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
           +  +  G VYA GGN  GQLG G  D  +T  +++     + +  K +S GA  +A + +
Sbjct: 138 LVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTI--KQLSAGANTSAALTE 195

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAV 474
           DGK+F WG N  GQ+GL D  +  IP +VT+ G     ++CG++H+  + +
Sbjct: 196 DGKLFMWGDNSEGQIGLEDKSNVCIPHEVTV-GKPISWISCGYYHSAFVTM 245



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 139/298 (46%), Gaps = 45/298 (15%)

Query: 213 CLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR-----IRMVSSPHP 267
           C+  L P  ++   A G  HTL  +D G V+  G   EGQLGLG          +    P
Sbjct: 118 CIKALKPE-KVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTP 176

Query: 268 IPCIES-SYGKDRSAALSRGSV------NSEG------------PGFRVPGNYVKGIACG 308
              I+  S G + SAAL+          NSEG            P     G  +  I+CG
Sbjct: 177 ADTIKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISWISCG 236

Query: 309 GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVS--SLLGI--QIEGVAAGLWHT 364
             HSA +T  G L TFG    G+ G     +EL  N  S   +LGI  ++  VA G  HT
Sbjct: 237 YYHSAFVTMDGELYTFGEPENGKLG---LPNELLMNHRSPQRVLGIPERVIQVACGGGHT 293

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAET-LPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
           + ++ +  VYAFG  QFGQLG G    ET  P++++   +++     +SCG  HTA++ +
Sbjct: 294 VVLT-EKVVYAFGLGQFGQLGLGTFLFETSEPKIIE--RIKDQKICHISCGENHTALMTE 350

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC------VPRNVACGWWHTLLLAVP 475
            G ++ +G  ++G+LGLG     N  +Q     C        + +ACG  H L+ A P
Sbjct: 351 LGLLYTFGDGRHGKLGLG---MENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVFATP 405



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 111/254 (43%), Gaps = 40/254 (15%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
           ++ G  HT  ++   +++ +G    GQLGLGS+  ++       CI++            
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKP----TCIKA------------ 121

Query: 286 GSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNC 345
                      +    VK  ACG  H+ V TD G +   G    GQ G G TDD  + + 
Sbjct: 122 -----------LKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQ 170

Query: 346 VSSLL-GIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLE 404
           +        I+ ++AG   +  ++ DG ++ +G N  GQ+G        +P        E
Sbjct: 171 IVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPH-------E 223

Query: 405 NVHSKS---VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPR- 460
               K    +SCG  H+A +  DG+++ +G  + G+LGL + +  N  S   + G   R 
Sbjct: 224 VTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERV 283

Query: 461 -NVACGWWHTLLLA 473
             VACG  HT++L 
Sbjct: 284 IQVACGGGHTVVLT 297



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 83/198 (41%), Gaps = 56/198 (28%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
           R+  VA GG HT+ L++   V+ +G G  GQLGLG+ +   S P  I             
Sbjct: 282 RVIQVACGGGHTVVLTE-KVVYAFGLGQFGQLGLGTFLFETSEPKIIE------------ 328

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD--D 339
                         R+    +  I+CG  H+A++T+ G L TFG G +G+ G G  +  +
Sbjct: 329 --------------RIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTN 374

Query: 340 ELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL-- 397
           +  P   S+ L   ++ +A G  H +  ++                         PRL  
Sbjct: 375 QFFPTLCSNFLRFAVQLIACGGCHMLVFAT-------------------------PRLGT 409

Query: 398 LDAPSLENVHSKSVSCGA 415
           +D P  E+V+   +S G+
Sbjct: 410 IDEPKFEDVYEPYISTGS 427


>gi|410947370|ref|XP_003980422.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
           [Felis catus]
          Length = 527

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 103/176 (58%), Gaps = 7/176 (3%)

Query: 303 KGIAC----GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS-LLGIQIEGV 357
           K IAC     G H  + T  G + T+G   Y Q G G+T+  L P  +S+ L   Q+  V
Sbjct: 74  KKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLMPCHISTNLSNKQVTEV 133

Query: 358 AAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARH 417
           A G +H++ ++SDG+V+A+G N  GQ+G+G    + +PR +    L+N    +++CG   
Sbjct: 134 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTG-CLQNKVVVNIACGQMC 192

Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
           +  + + G+V+ WG+N  GQLGLG   ++  P +++ ++G   + VACG+ HTL+L
Sbjct: 193 SMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRISALQGIRVQRVACGYAHTLVL 248



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 124/253 (49%), Gaps = 31/253 (12%)

Query: 220 GVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
           G +IA ++ G G H +  +  G+V+ WG+    QLG G+     ++   +PC  S+    
Sbjct: 73  GKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT-----TNHGLMPCHIST---- 123

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
                             +    V  +ACG  HS V+T  G +  +G+   GQ G GST 
Sbjct: 124 -----------------NLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTA 166

Query: 339 DELSPNCVSSLLGIQIE-GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
           ++  P  V+  L  ++   +A G   ++ + + G+VY +G N  GQLG G    +  P  
Sbjct: 167 NQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCR 226

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE-G 456
           + A  L+ +  + V+CG  HT V+ D+G+V+ WG N YGQLG G+  +++ P+ V +E  
Sbjct: 227 ISA--LQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPVVVEKD 284

Query: 457 CVPRNVACGWWHT 469
            +    AC   HT
Sbjct: 285 RIIEIAACHLAHT 297



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 113/233 (48%), Gaps = 34/233 (14%)

Query: 203 SGDENLSAFPCLVTLN-PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +G  N    PC ++ N    ++  VA G  H+L L+  G+V+ WGY   GQ+G GS    
Sbjct: 109 NGTTNHGLMPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---- 164

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
            ++  PIP         R     +  V             V  IACG   S  + + G +
Sbjct: 165 -TANQPIP--------RRVTGCLQNKV-------------VVNIACGQMCSMAVVNTGEV 202

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             +G+   GQ G GS+ ++ +P  +S+L GI+++ VA G  HT+ ++ +G VYA+G N +
Sbjct: 203 YVWGYNGNGQLGLGSSGNQPTPCRISALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSY 262

Query: 382 GQLGTGGDQAETLPRLLDAPSL--ENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           GQLGTG    ++ P    AP +  ++   +  +C   HT A     G V+ WG
Sbjct: 263 GQLGTGNKSNQSYP----APVVVEKDRIIEIAACHLAHTSAAKTQGGHVYMWG 311



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 3/105 (2%)

Query: 370 DGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFC 429
           + +++  G N  G LG G  Q+   PR LD+ S + +   S   G  H  +   +G+VF 
Sbjct: 40  NDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGP-HIVLATTEGEVFT 98

Query: 430 WGWNKYGQLGLGDVIDRNIPSQVT--IEGCVPRNVACGWWHTLLL 472
           WG N Y QLG G      +P  ++  +       VACG +H+L+L
Sbjct: 99  WGHNAYSQLGNGTTNHGLMPCHISTNLSNKQVTEVACGSYHSLVL 143


>gi|307109549|gb|EFN57787.1| hypothetical protein CHLNCDRAFT_10671, partial [Chlorella
           variabilis]
          Length = 272

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/257 (31%), Positives = 120/257 (46%), Gaps = 36/257 (14%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  +AAG  HT A++  G+++  G   E QLG+                     + RS A
Sbjct: 35  VVNLAAGALHTAAVTSDGELYVMGSNEESQLGV---------------------RQRSDA 73

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
           L+   V +      +    V+ +ACG  H+  + D GA+  FG   YGQ G G     + 
Sbjct: 74  LAPTRVTA------LEQFQVQRVACGPAHTLAVVDGGAVAAFGSAEYGQVGLGPCGARVE 127

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
            P  V  L  + I  VAAG  HT+ +SS G V++ G   FG LG G  +   +PR +   
Sbjct: 128 LPRVVKDLRSMHIVRVAAGGSHTLALSSTGGVFSCGNGSFGALGRGTTEGNDVPRPIS-- 185

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL-----GLGDVIDRNIPSQV-TIE 455
            L  +    ++CG  H+A I  DG+V  WG  K+  L     G GD  + + P  V  ++
Sbjct: 186 RLWPLGVVQIACGENHSAAITADGRVLTWGRGKHRLLPAFHCGHGDFENCSTPKPVQALK 245

Query: 456 GCVPRNVACGWWHTLLL 472
           G V R V+CG  HT+LL
Sbjct: 246 GIVGRQVSCGDDHTVLL 262



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 56/153 (36%), Positives = 74/153 (48%), Gaps = 4/153 (2%)

Query: 323 TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFG 382
            FG G  GQ G GST+D   P  V  L    +  +AAG  HT  ++SDG++Y  G N+  
Sbjct: 4   VFGRGDMGQLGDGSTEDVFVPRLVKGLKSRDVVNLAAGALHTAAVTSDGELYVMGSNEES 63

Query: 383 QLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGD 442
           QLG         P  + A  LE    + V+CG  HT  + D G V  +G  +YGQ+GLG 
Sbjct: 64  QLGVRQRSDALAPTRVTA--LEQFQVQRVACGPAHTLAVVDGGAVAAFGSAEYGQVGLGP 121

Query: 443 VIDR-NIPSQVT-IEGCVPRNVACGWWHTLLLA 473
              R  +P  V  +       VA G  HTL L+
Sbjct: 122 CGARVELPRVVKDLRSMHIVRVAAGGSHTLALS 154



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 100/225 (44%), Gaps = 33/225 (14%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P  VT     ++  VA G  HTLA+ D G V  +G    GQ+GLG     V  P  +  +
Sbjct: 76  PTRVTALEQFQVQRVACGPAHTLAVVDGGAVAAFGSAEYGQVGLGPCGARVELPRVVKDL 135

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
            S +                          +  +A GG H+  ++  G + + G G +G 
Sbjct: 136 RSMH--------------------------IVRVAAGGSHTLALSSTGGVFSCGNGSFGA 169

Query: 332 CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQL-----GT 386
            G+G+T+    P  +S L  + +  +A G  H+  I++DG V  +G  +   L     G 
Sbjct: 170 LGRGTTEGNDVPRPISRLWPLGVVQIACGENHSAAITADGRVLTWGRGKHRLLPAFHCGH 229

Query: 387 GGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWG 431
           G  +  + P+ + A  L+ +  + VSCG  HT ++ +DG V+ WG
Sbjct: 230 GDFENCSTPKPVQA--LKGIVGRQVSCGDDHTVLLTEDGSVYAWG 272



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 56/100 (56%), Gaps = 3/100 (3%)

Query: 372 DVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWG 431
           +V+ FG    GQLG G  +   +PRL+    L++    +++ GA HTA +  DG+++  G
Sbjct: 1   EVWVFGRGDMGQLGDGSTEDVFVPRLVKG--LKSRDVVNLAAGALHTAAVTSDGELYVMG 58

Query: 432 WNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
            N+  QLG+    D   P++VT +E    + VACG  HTL
Sbjct: 59  SNEESQLGVRQRSDALAPTRVTALEQFQVQRVACGPAHTL 98


>gi|219129772|ref|XP_002185055.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217403550|gb|EEC43502.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 727

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 106/237 (44%), Gaps = 35/237 (14%)

Query: 242 VWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNY 301
           V  WG G  GQLG                    +GK R   L R      G   R+    
Sbjct: 235 VAAWGVGRRGQLG--------------------HGKRRDERLPRRLRGGIGYAVRIVQVS 274

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-----DDELSPNCVSSLLGIQIEG 356
             G      HS ++T  G +L+FG G YG  G G +      D + P  V  L  +++  
Sbjct: 275 AGGGLVRVAHSLLLTSTGRVLSFGTGQYGALGHGYSAAKQLPDVMRPQYVEGLAHVRVCC 334

Query: 357 VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR 416
           VAAG  H+  ++SDGDVY +G    GQLG    + +  PR + A  LE+    S+SCG+R
Sbjct: 335 VAAGELHSAVVTSDGDVYTWGDGFCGQLGHADKRPQLAPRQVTAGGLEDEVVASISCGSR 394

Query: 417 HTAVIADDGKVFCWGWNKYGQLGL----------GDVIDRNIPSQVTIEGCVPRNVA 463
           HT  + +DG+VF WG   +G LG             V++  +   + ++G VP  VA
Sbjct: 395 HTLAVTEDGEVFSWGLGHFGVLGRSFTPFDYDADAAVVNFTVEETLPVDGAVPIPVA 451



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/281 (24%), Positives = 119/281 (42%), Gaps = 46/281 (16%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +A+++ G RHTLA+++ G+V+ WG G  G LG                  + +  D  AA
Sbjct: 386 VASISCGSRHTLAVTEDGEVFSWGLGHFGVLGRSF---------------TPFDYDADAA 430

Query: 283 LSRGSVNS----EG----PGFRVPGNYVKGIACGGRHSAVI------TDAGALLTFGWGL 328
           +   +V      +G    P  R+P N    +       A         +  A L     L
Sbjct: 431 VVNFTVEETLPVDGAVPIPVARIPDNVAPAVDSFPPRDAAAPALLEGRNFAAELMAHLDL 490

Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGG 388
                   + D+  P  + SL GI + G +AG  H++ +S +G +Y+ G    G LG G 
Sbjct: 491 IANLSLDDSSDQCIPKVIESLQGIPMVGASAGHRHSLLLSQEGALYSCGAGSGGCLGHGD 550

Query: 389 DQAETLP---RLLDAPSL---ENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGD 442
            Q++  P      D P     E      +S G   +  ++  G V+ WG    G++GLG 
Sbjct: 551 TQSQMHPVRITAFDEPEEDGSERTRILQMSAGVDISMAVSTRGSVYGWGKTDGGRIGLG- 609

Query: 443 VIDRN---IPSQVTI------EGCVPRNVACGWWHTLLLAV 474
            + RN   +P +V++         +  +V CG+ H++++ +
Sbjct: 610 -MARNQVTLPRRVSVYREEDGSPVLAVDVECGYVHSIVVGL 649



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 82/179 (45%), Gaps = 14/179 (7%)

Query: 304 GIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG------- 356
           G + G RHS +++  GAL + G G  G  G G T  ++ P  +++    + +G       
Sbjct: 518 GASAGHRHSLLLSQEGALYSCGAGSGGCLGHGDTQSQMHPVRITAFDEPEEDGSERTRIL 577

Query: 357 -VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAE-TLPRLLDAPSLEN---VHSKSV 411
            ++AG+  ++ +S+ G VY +G    G++G G  + + TLPR +     E+   V +  V
Sbjct: 578 QMSAGVDISMAVSTRGSVYGWGKTDGGRIGLGMARNQVTLPRRVSVYREEDGSPVLAVDV 637

Query: 412 SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTL 470
            CG  H+ V+  DG +   G    G  G  D  ++N  S+    G          WH L
Sbjct: 638 ECGYVHSIVVGLDGTIHMCGG--VGVEGEADGQEQNEESKSATVGKARAVPDFNVWHRL 694



 Score = 42.0 bits (97), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 70/303 (23%), Positives = 116/303 (38%), Gaps = 54/303 (17%)

Query: 100 IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQV 159
           +   + G  H +AVTE GEV++WG       GR F      T  D D      +F  E+ 
Sbjct: 386 VASISCGSRHTLAVTEDGEVFSWGLGHFGVLGRSF------TPFDYDADAAVVNFTVEET 439

Query: 160 SPRS-----QVSRSSGGTSSGTDG---RGSGEEGSKRRRISLAKQTAE-----SSSSGDE 206
            P        V+R     +   D    R +        R   A+  A      + S  D 
Sbjct: 440 LPVDGAVPIPVARIPDNVAPAVDSFPPRDAAAPALLEGRNFAAELMAHLDLIANLSLDDS 499

Query: 207 NLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPH 266
           +    P ++    G+ +   +AG RH+L LS  G ++  G G  G LG G      S  H
Sbjct: 500 SDQCIPKVIESLQGIPMVGASAGHRHSLLLSQEGALYSCGAGSGGCLGHGD---TQSQMH 556

Query: 267 PIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGW 326
           P+        ++  +  +R                +  ++ G   S  ++  G++  +GW
Sbjct: 557 PVRITAFDEPEEDGSERTR----------------ILQMSAGVDISMAVSTRGSV--YGW 598

Query: 327 GLY--GQCGQGSTDDELS-PNCV--------SSLLGIQIEGVAAGLWHTICISSDGDVYA 375
           G    G+ G G   ++++ P  V        S +L + +E    G  H+I +  DG ++ 
Sbjct: 599 GKTDGGRIGLGMARNQVTLPRRVSVYREEDGSPVLAVDVE---CGYVHSIVVGLDGTIHM 655

Query: 376 FGG 378
            GG
Sbjct: 656 CGG 658


>gi|414585739|tpg|DAA36310.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 1044

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 91/351 (25%), Positives = 145/351 (41%), Gaps = 97/351 (27%)

Query: 211 FPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPC 270
            P LV     + + ++A G  H   ++  G+V+ WG    G++G    I+ VS P  +  
Sbjct: 254 LPMLVDSTNMLDVQSIACGETHAAIITKQGEVYSWGNESSGRIGNQVNIK-VSRPKVVQS 312

Query: 271 IESSYGKDRSAALSRGSVNS-------------EGPGFRVPGNYVKG------------- 304
           + S + KD    ++ GS ++             EGP      +Y +              
Sbjct: 313 LASLHVKD----VAYGSKHTCAVTVSGELIEWGEGPYMGQLDSYARNQWFPHKLFSPLDG 368

Query: 305 -----IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAA 359
                IACG  H+A+IT +G L T+G G +G  G G T     P  V SL G +++ VA 
Sbjct: 369 ISVVKIACGPWHTAIITSSGQLYTYGDGTFGVLGHGDTQGTTRPKEVESLKGSRVKCVAC 428

Query: 360 GLWHTICI----------SSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPS------- 402
           G WHT  I          S    ++ +G    G+LG    + + +P  +D+ +       
Sbjct: 429 GPWHTAAIVEVISDFKSNSPRSKLFTWGDADRGKLGHADKKMKLIPTCVDSLTDYDFIQV 488

Query: 403 --------------------------LENVHS-----------------KSVSCGARHTA 419
                                     L N H+                 + +S G+ H A
Sbjct: 489 SCGTALTVALSVTGVVFTSGSSMHGQLGNPHADGKTVSAVEGLLKSEFVRHISSGSSHVA 548

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
           V+  +GKVF WG  K GQLGLGD ++R+ P+ V  +EG    +++CG+ +T
Sbjct: 549 VVTTNGKVFTWGKGKEGQLGLGDFLNRSTPTLVDALEGRHVESLSCGYNYT 599



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 111/442 (25%), Positives = 179/442 (40%), Gaps = 107/442 (24%)

Query: 14  VFMWGYLPGALPQRSPILSPLVVRLPLTVGSA-WRDVCGGGCG--FAMAISDSRKLITWG 70
           VF WG   G++ +      PL    P+ V S    DV    CG   A  I+   ++ +WG
Sbjct: 234 VFFWGDAFGSILECGDTSKPL----PMLVDSTNMLDVQSIACGETHAAIITKQGEVYSWG 289

Query: 71  STDDLGQSYVTSGKHG-----EIPEPFPLPTEASI-VK-AAAGWAHCVAVTEGGEVYTWG 123
           +         +SG+ G     ++  P  + + AS+ VK  A G  H  AVT  GE+  WG
Sbjct: 290 NE--------SSGRIGNQVNIKVSRPKVVQSLASLHVKDVAYGSKHTCAVTVSGELIEWG 341

Query: 124 WKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVS---------RSSGGTSS 174
                  G   G L        D + R   F  +  SP   +S          ++  TSS
Sbjct: 342 ------EGPYMGQL--------DSYARNQWFPHKLFSPLDGISVVKIACGPWHTAIITSS 387

Query: 175 G---TDGRGS-GEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGG 230
           G   T G G+ G  G                  GD   +  P  V    G R+  VA G 
Sbjct: 388 GQLYTYGDGTFGVLGH-----------------GDTQGTTRPKEVESLKGSRVKCVACGP 430

Query: 231 RHTLALSDI----------GQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            HT A+ ++           +++ WG    G+LG   + +M   P    C++S    D  
Sbjct: 431 WHTAAIVEVISDFKSNSPRSKLFTWGDADRGKLGHADK-KMKLIP---TCVDSLTDYD-- 484

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                               +++ ++CG   +  ++  G + T G  ++GQ G    D +
Sbjct: 485 --------------------FIQ-VSCGTALTVALSVTGVVFTSGSSMHGQLGNPHADGK 523

Query: 341 LSPNCVSSLLGIQ-IEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLD 399
            + + V  LL  + +  +++G  H   ++++G V+ +G  + GQLG G     + P L+D
Sbjct: 524 -TVSAVEGLLKSEFVRHISSGSSHVAVVTTNGKVFTWGKGKEGQLGLGDFLNRSTPTLVD 582

Query: 400 APSLENVHSKSVSCGARHTAVI 421
           A  LE  H +S+SCG  +TA +
Sbjct: 583 A--LEGRHVESLSCGYNYTAAV 602



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 69/134 (51%), Gaps = 8/134 (5%)

Query: 343 PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPS 402
           P  V S   + ++ +A G  H   I+  G+VY++G    G++G   +   + P+++   S
Sbjct: 255 PMLVDSTNMLDVQSIACGETHAAIITKQGEVYSWGNESSGRIGNQVNIKVSRPKVVQ--S 312

Query: 403 LENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN--IPSQVT--IEGCV 458
           L ++H K V+ G++HT  +   G++  WG   Y  +G  D   RN   P ++   ++G  
Sbjct: 313 LASLHVKDVAYGSKHTCAVTVSGELIEWGEGPY--MGQLDSYARNQWFPHKLFSPLDGIS 370

Query: 459 PRNVACGWWHTLLL 472
              +ACG WHT ++
Sbjct: 371 VVKIACGPWHTAII 384



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 60/109 (55%), Gaps = 4/109 (3%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           + S  DV+ F G+ FG +   GD ++ LP L+D+ ++ +V  +S++CG  H A+I   G+
Sbjct: 228 LDSLKDVF-FWGDAFGSILECGDTSKPLPMLVDSTNMLDV--QSIACGETHAAIITKQGE 284

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLAV 474
           V+ WG    G++G    I  + P  V ++     ++VA G  HT  + V
Sbjct: 285 VYSWGNESSGRIGNQVNIKVSRPKVVQSLASLHVKDVAYGSKHTCAVTV 333


>gi|348676412|gb|EGZ16230.1| hypothetical protein PHYSODRAFT_445559 [Phytophthora sojae]
          Length = 2434

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/288 (28%), Positives = 131/288 (45%), Gaps = 46/288 (15%)

Query: 229 GGRHTLALSDIGQVWGWGYGGEGQLGLGSR----------------IRMVSSPH---PIP 269
           G  HT+ ++  G+    GY   GQLG G+                 +R+VS  +    + 
Sbjct: 528 GCEHTILVTMDGRAATCGYNYRGQLGHGNTASESVPKIVRSLENRIVRLVSCSYYHTVMA 587

Query: 270 CIESSYGKDRSAALSRGSV----NSEGPGFRVPGN-------YVKGIACGGRHSAVITDA 318
           C E   G+       R       +++    +VP +       +V  +ACG  H+ V+T  
Sbjct: 588 CEEDGSGQQYLYTFGRNDYGQLGHNDSIDRKVPQHVEAMGDQHVVSVACGQYHTMVVTAT 647

Query: 319 GALLTFGWGLYGQCGQGSTDDELSPNCVSS-LLGIQIEGVAAGLWHTICISSDGDVYAFG 377
           G    FG   YGQ G  S +++L P  V + L   +   +  G +HTI + S   ++AFG
Sbjct: 648 GKAFAFGKNDYGQLGIDSMENQLVPVQVRAGLEKHECLEIRCGYYHTIVLCSGAHLFAFG 707

Query: 378 GNQFGQLGTGGDQAETLP-------RLLDAPSLENVHSKSV---SCGARHTAVIADDGKV 427
            N +GQLG G   A +         R   A  +E +  K +   +CG  HT  ++D+G +
Sbjct: 708 RNDYGQLGLGRANASSTANLQLQQQRFSYARLIEELEGKDIVRFACGCYHTVAVSDNGVM 767

Query: 428 FCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRN---VACGWWHTLLL 472
           + +G N +GQLG GD  +R  P    I+  V +    VA G++HT++L
Sbjct: 768 YVFGRNNHGQLGTGDTNERVYP--FPIDDFVGKRVALVAAGFYHTVVL 813



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 80/293 (27%), Positives = 120/293 (40%), Gaps = 46/293 (15%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM-------------VSSPHPIP 269
           I  + AG  HT+AL+  G+V   GY   GQ G G   R+             +S  H   
Sbjct: 468 IIQIGAGNEHTIALTVDGKVLTCGYNDNGQCGQGGTARVSHLCEMPKMGDNAISQVHAYN 527

Query: 270 CIESSY-----------GKDRSAALSRGSVNSEG-PGF--RVPGNYVKGIACGGRHSAVI 315
             E +            G +    L  G+  SE  P     +    V+ ++C   H+ + 
Sbjct: 528 GCEHTILVTMDGRAATCGYNYRGQLGHGNTASESVPKIVRSLENRIVRLVSCSYYHTVMA 587

Query: 316 TDAG-----ALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
            +        L TFG   YGQ G   + D   P  V ++    +  VA G +HT+ +++ 
Sbjct: 588 CEEDGSGQQYLYTFGRNDYGQLGHNDSIDRKVPQHVEAMGDQHVVSVACGQYHTMVVTAT 647

Query: 371 GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
           G  +AFG N +GQLG    + + +P  + A  LE      + CG  HT V+     +F +
Sbjct: 648 GKAFAFGKNDYGQLGIDSMENQLVPVQVRA-GLEKHECLEIRCGYYHTIVLCSGAHLFAF 706

Query: 431 GWNKYGQLGLG-----DVIDRNIPSQV--------TIEGCVPRNVACGWWHTL 470
           G N YGQLGLG        +  +  Q          +EG      ACG +HT+
Sbjct: 707 GRNDYGQLGLGRANASSTANLQLQQQRFSYARLIEELEGKDIVRFACGCYHTV 759



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 52/229 (22%), Positives = 93/229 (40%), Gaps = 48/229 (20%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR------------------------ 258
           + +VA G  HT+ ++  G+ + +G    GQLG+ S                         
Sbjct: 631 VVSVACGQYHTMVVTATGKAFAFGKNDYGQLGIDSMENQLVPVQVRAGLEKHECLEIRCG 690

Query: 259 ----IRMVSSPHPIPCIESSYGK---DRSAALSRGSVNSEGPGF-------RVPGNYVKG 304
               I + S  H      + YG+    R+ A S  ++  +   F        + G  +  
Sbjct: 691 YYHTIVLCSGAHLFAFGRNDYGQLGLGRANASSTANLQLQQQRFSYARLIEELEGKDIVR 750

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
            ACG  H+  ++D G +  FG   +GQ G G T++ + P  +   +G ++  VAAG +HT
Sbjct: 751 FACGCYHTVAVSDNGVMYVFGRNNHGQLGTGDTNERVYPFPIDDFVGKRVALVAAGFYHT 810

Query: 365 ICIS-------SDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENV 406
           + ++       +D D     GN  G+         T   +L +PS++ +
Sbjct: 811 VVLTGGKEDEKNDQDA---AGNDKGEGSQSTASGITHTEILSSPSVQEL 856


>gi|255085030|ref|XP_002504946.1| predicted protein [Micromonas sp. RCC299]
 gi|226520215|gb|ACO66204.1| predicted protein [Micromonas sp. RCC299]
          Length = 526

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/257 (31%), Positives = 119/257 (46%), Gaps = 47/257 (18%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
           R+  V+AG  HT+ +++ G++W WG     Q GLGS    V    P+P            
Sbjct: 212 RVVAVSAGHHHTVCVTEGGELWAWGRNDASQCGLGSGAPSVV---PLPAW---------- 258

Query: 282 ALSRGSVNSEGPGFRVPGNY--VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDD 339
                 ++S  PG   PGN+  V  +A G RH+  +TD GA+ T+G G  G  G G+ + 
Sbjct: 259 ------ISSASPG--APGNHGAVMSVAAGPRHNLAVTDRGAVYTWGDGKEGVLGHGADES 310

Query: 340 -----------ELSPNCVSSLL--GIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
                      E +P  V SL   GI++   AAGL H++C+   G V+A+G  +F QLG 
Sbjct: 311 WRWGFWGRDTTEPAPRLVRSLADDGIEVASAAAGLCHSVCVDRTGHVHAWGQGRFNQLGV 370

Query: 387 GGDQAETL-PRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVID 445
           G   A          P+L  V  + ++ G      +  DG +  WG N  G+LGLG+  D
Sbjct: 371 GAKNAPAFTTEPTRVPALGRV--RDLAAGGNFNVAVGADGSMISWGANGNGELGLGNSND 428

Query: 446 RNIPSQVTIEGCVPRNV 462
           +         G VPR V
Sbjct: 429 K--------RGDVPRLV 437



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 86/354 (24%), Positives = 137/354 (38%), Gaps = 58/354 (16%)

Query: 94  LPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTG------TGLDKDV 147
           LP    +V  +AG  H V VTEGGE++ WG  +    G   G  S        +      
Sbjct: 207 LPQHDRVVAVSAGHHHTVCVTEGGELWAWGRNDASQCGLGSGAPSVVPLPAWISSASPGA 266

Query: 148 FERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAES---SSSG 204
                + ++    PR  ++ +  G        G G+EG       L     ES      G
Sbjct: 267 PGNHGAVMSVAAGPRHNLAVTDRGA---VYTWGDGKEGV------LGHGADESWRWGFWG 317

Query: 205 DENLSAFPCLVT--LNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMV 262
            +     P LV    + G+ +A+ AAG  H++ +   G V  WG G   QLG+G++    
Sbjct: 318 RDTTEPAPRLVRSLADDGIEVASAAAGLCHSVCVDRTGHVHAWGQGRFNQLGVGAKNAPA 377

Query: 263 SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL 322
            +  P           R  AL R                V+ +A GG  +  +   G+++
Sbjct: 378 FTTEPT----------RVPALGR----------------VRDLAAGGNFNVAVGADGSMI 411

Query: 323 TFGWGLYGQCGQGSTDDELS--PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG-GN 379
           ++G    G+ G G+++D+    P  V +         +AG  H    SSDG ++ +G   
Sbjct: 412 SWGANGNGELGLGNSNDKRGDVPRLVHNPNAASFASASAGWRHAAATSSDGRLWTWGWSG 471

Query: 380 QFGQLGTGGDQAETLPRLLDA------PSLE---NVHSKSVSCGARHTAVIADD 424
             GQ G   D       L +       P+L       +K+VSCG  HT  + ++
Sbjct: 472 SVGQHGVDADSTGGQLGLRNGQSDFWEPTLVVGLPGKAKAVSCGFNHTVAVLEE 525



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 2/110 (1%)

Query: 351 GIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSL-ENVHSK 409
           G+ +   +AG  HT  +++DG VY  G N+ GQLG   D A  +P L     L ++    
Sbjct: 156 GLDVVSASAGGSHTAVVTADGAVYTCGLNEHGQLGHSHD-AGYVPILRPVSGLPQHDRVV 214

Query: 410 SVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVP 459
           +VS G  HT  + + G+++ WG N   Q GLG      +P    I    P
Sbjct: 215 AVSAGHHHTVCVTEGGELWAWGRNDASQCGLGSGAPSVVPLPAWISSASP 264



 Score = 46.6 bits (109), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 39/76 (51%), Gaps = 11/76 (14%)

Query: 373 VYAFGGNQFGQLGTGGD---------QAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
           V + G   FG+LG GGD          AET  R+   P   +V   S S G  HTAV+  
Sbjct: 117 VVSCGNGDFGRLGHGGDGRGRAGLGMSAETFQRMTGIPQGLDV--VSASAGGSHTAVVTA 174

Query: 424 DGKVFCWGWNKYGQLG 439
           DG V+  G N++GQLG
Sbjct: 175 DGAVYTCGLNEHGQLG 190



 Score = 43.5 bits (101), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 10/107 (9%)

Query: 26  QRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDD----LGQSYVT 81
           + +P  +    R+P  +G   RD+  GG  F +A+     +I+WG+  +    LG S   
Sbjct: 373 KNAPAFTTEPTRVP-ALGRV-RDLAAGG-NFNVAVGADGSMISWGANGNGELGLGNS--- 426

Query: 82  SGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECV 128
           + K G++P     P  AS   A+AGW H  A +  G ++TWGW   V
Sbjct: 427 NDKRGDVPRLVHNPNAASFASASAGWRHAAATSSDGRLWTWGWSGSV 473


>gi|195490361|ref|XP_002093107.1| GE21143 [Drosophila yakuba]
 gi|194179208|gb|EDW92819.1| GE21143 [Drosophila yakuba]
          Length = 1057

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 91/290 (31%), Positives = 125/290 (43%), Gaps = 30/290 (10%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGL---GSRIRMVSSPHPI 268
           P  +   P   +  VA G RHTL L+  G+V+  G     QLG      R  ++      
Sbjct: 31  PSQIPWTPDTAVQQVACGHRHTLFLTANGKVYACGSNDHSQLGHELPTKRPLLIPELQDY 90

Query: 269 PCIESSYGKDRSAALSR-GSVNSEGPG-------------FRVP-------GNYVKGIAC 307
             I+ S G   S ALS  G V S G                ++P          V  IAC
Sbjct: 91  VVIQISCGSRHSLALSEWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVSKTVVQIAC 150

Query: 308 GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNC---VSSLLGIQIEGVAAGLWHT 364
           G  HS  +T  G L ++G  +YGQ G  S  D    N    +++LLGI +  +A G  H+
Sbjct: 151 GNNHSLALTSCGELYSWGSNIYGQLGVNSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHS 210

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
             IS  G V+ +G N  GQLG   +     P  L   +L  +  + V+CG   +  + ++
Sbjct: 211 FLISKSGAVFGWGRNNCGQLGLNDEANRAYPTQLK--TLRTLGVRFVACGDEFSVFLTNE 268

Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLA 473
           G VF  G   YGQLG G   +  +P  V  + G     VACG  HTL L 
Sbjct: 269 GGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALV 318



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 86/289 (29%), Positives = 131/289 (45%), Gaps = 39/289 (13%)

Query: 199 ESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR 258
           + S  G E  +  P L+       +  ++ G RH+LALS+ GQV  WG    GQLG  + 
Sbjct: 68  DHSQLGHELPTKRPLLIPELQDYVVIQISCGSRHSLALSEWGQVLSWGDNDCGQLGHATD 127

Query: 259 IRMVSSPHPI------PCIESSYGKDRSAALS------------RGSVNSEGPGFRVPGN 300
             +V  P  +        ++ + G + S AL+             G +    P      N
Sbjct: 128 KEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPKDLTHCN 187

Query: 301 Y-----------VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS---PNCV 346
           Y           +  IACGG HS +I+ +GA+  FGWG    CGQ   +DE +   P  +
Sbjct: 188 YPLRLTTLLGIPLAAIACGGNHSFLISKSGAV--FGWG-RNNCGQLGLNDEANRAYPTQL 244

Query: 347 SSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENV 406
            +L  + +  VA G   ++ ++++G V+  G   +GQLG G    E LPR++    L   
Sbjct: 245 KTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGS 302

Query: 407 HSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI 454
               V+CG RHT A++   G+V+ +G    GQLG        +P QV I
Sbjct: 303 TITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLP-QVVI 350



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 104/375 (27%), Positives = 162/375 (43%), Gaps = 53/375 (14%)

Query: 30  ILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGE 87
           IL+P   ++P T  +A + V  G     + ++ + K+   GS D   LG    T      
Sbjct: 28  ILTP--SQIPWTPDTAVQQVACGH-RHTLFLTANGKVYACGSNDHSQLGHELPTKR---- 80

Query: 88  IPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDV 147
            P   P   +  +++ + G  H +A++E G+V +WG  +C       G L  G   DK++
Sbjct: 81  -PLLIPELQDYVVIQISCGSRHSLALSEWGQVLSWGDNDC-------GQL--GHATDKEI 130

Query: 148 FERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDEN 207
              Q   +  Q+  ++ V  + G   S       GE  S    I         +S  D  
Sbjct: 131 V--QLPKVVRQLVSKTVVQIACGNNHS-LALTSCGELYSWGSNIY---GQLGVNSPKDLT 184

Query: 208 LSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHP 267
              +P  +T   G+ +A +A GG H+  +S  G V+GWG    GQLGL            
Sbjct: 185 HCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDE--------- 235

Query: 268 IPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWG 327
                     +R+      ++ + G         V+ +ACG   S  +T+ G + T G G
Sbjct: 236 ---------ANRAYPTQLKTLRTLG---------VRFVACGDEFSVFLTNEGGVFTCGAG 277

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFGGNQFGQLGT 386
            YGQ G G + +E+ P  V  L+G  I  VA G  HT+  + S G VYAFG    GQLGT
Sbjct: 278 AYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGT 337

Query: 387 GGDQAETLPRLLDAP 401
              ++  LP+++  P
Sbjct: 338 RSTKSLMLPQVVIGP 352



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 80/157 (50%), Gaps = 26/157 (16%)

Query: 329 YGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
           +GQ G G  +DE  L+P+ +       ++ VA G  HT+ ++++G VYA G N   QLG 
Sbjct: 15  HGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTANGKVYACGSNDHSQLG- 73

Query: 387 GGDQAETLP--RLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG----- 439
                  LP  R L  P L++     +SCG+RH+  +++ G+V  WG N  GQLG     
Sbjct: 74  -----HELPTKRPLLIPELQDYVVIQISCGSRHSLALSEWGQVLSWGDNDCGQLGHATDK 128

Query: 440 ----LGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
               L  V+ R + S+  ++      +ACG  H+L L
Sbjct: 129 EIVQLPKVV-RQLVSKTVVQ------IACGNNHSLAL 158



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 76/327 (23%), Positives = 128/327 (39%), Gaps = 57/327 (17%)

Query: 24  LPQRSPILSPLV---VRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYV 80
           LP + P+L P +   V + ++ GS            ++A+S+  ++++WG  D     + 
Sbjct: 76  LPTKRPLLIPELQDYVVIQISCGSR----------HSLALSEWGQVLSWGDNDCGQLGHA 125

Query: 81  TSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTG 140
           T  +  ++P+        ++V+ A G  H +A+T  GE+Y+WG         ++G L  G
Sbjct: 126 TDKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWG-------SNIYGQL--G 176

Query: 141 TGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAES 200
               KD+           +      + + GG  S    +     G  R          E+
Sbjct: 177 VNSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDEA 236

Query: 201 SSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR 260
           + +    L     L     GVR   VA G   ++ L++ G V+  G G  GQLG G    
Sbjct: 237 NRAYPTQLKTLRTL-----GVRF--VACGDEFSVFLTNEGGVFTCGAGAYGQLGHG---- 285

Query: 261 MVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHS-AVITDAG 319
             SS   +P +                         + G+ +  +ACG RH+ A++   G
Sbjct: 286 -FSSNEMLPRM----------------------VMELMGSTITQVACGNRHTLALVPSRG 322

Query: 320 ALLTFGWGLYGQCGQGSTDDELSPNCV 346
            +  FG G  GQ G  ST   + P  V
Sbjct: 323 RVYAFGLGSSGQLGTRSTKSLMLPQVV 349



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 5/109 (4%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           ++S  ++Y +G    GQLG GG + E +      P   +   + V+CG RHT  +  +GK
Sbjct: 1   MASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTANGK 60

Query: 427 VFCWGWNKYGQLGLGDVIDRN--IPSQVTIEGCVPRNVACGWWHTLLLA 473
           V+  G N + QLG      R   IP    ++  V   ++CG  H+L L+
Sbjct: 61  VYACGSNDHSQLGHELPTKRPLLIPE---LQDYVVIQISCGSRHSLALS 106


>gi|26327145|dbj|BAC27316.1| unnamed protein product [Mus musculus]
          Length = 551

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/166 (36%), Positives = 98/166 (59%), Gaps = 3/166 (1%)

Query: 309 GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS-LLGIQIEGVAAGLWHTICI 367
           G H  + T  G + T+G   Y Q G G+T+  L P  +S+ L   Q+  VA G +H++ +
Sbjct: 108 GPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVL 167

Query: 368 SSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKV 427
           +SDG+V+A+G N  GQ+G+G    + +PR +    L+N    ++SCG   +  + D G+V
Sbjct: 168 TSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTG-CLQNKVVMNISCGQMCSMAVVDTGEV 226

Query: 428 FCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
           + WG+N  GQLGLG   ++  P +V  ++G   + VACG+ HTL+L
Sbjct: 227 YVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 272



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 124/253 (49%), Gaps = 31/253 (12%)

Query: 220 GVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
           G +IA+++ G G H +  +  G+V+ WG+    QLG G+     ++   +PC  S+    
Sbjct: 97  GKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGT-----TNHGLVPCHIST---- 147

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
                             +    V  +ACG  HS V+T  G +  +G+   GQ G GST 
Sbjct: 148 -----------------NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTA 190

Query: 339 DELSPNCVSSLLGIQI-EGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
           ++  P  V+  L  ++   ++ G   ++ +   G+VY +G N  GQLG G    +  P  
Sbjct: 191 NQPIPRRVTGCLQNKVVMNISCGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCR 250

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE-G 456
           + A  L+ +  + V+CG  HT V+ D+G+++ WG N YGQLG G+  +++ P+ V +E  
Sbjct: 251 VAA--LQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVEKD 308

Query: 457 CVPRNVACGWWHT 469
            +    AC   HT
Sbjct: 309 RIIEIAACHSAHT 321



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 114/233 (48%), Gaps = 34/233 (14%)

Query: 203 SGDENLSAFPCLVTLN-PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +G  N    PC ++ N    ++  VA G  H+L L+  G+V+ WGY   GQ+G GS    
Sbjct: 133 NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---- 188

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
            ++  PIP         R     +  V             V  I+CG   S  + D G +
Sbjct: 189 -TANQPIP--------RRVTGCLQNKV-------------VMNISCGQMCSMAVVDTGEV 226

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             +G+   GQ G GS+ ++ +P  V++L GI+++ VA G  HT+ ++ +G +YA+G N +
Sbjct: 227 YVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSY 286

Query: 382 GQLGTGG--DQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           GQLGTG   +Q+   P +++   +  +     +C + HT A     G V+ WG
Sbjct: 287 GQLGTGNKSNQSYPTPVVVEKDRIIEI----AACHSAHTSAAKTQGGHVYMWG 335



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 55/111 (49%), Gaps = 15/111 (13%)

Query: 370 DGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFC 429
           + +++  G N  G LG G  Q+   PR LD+ + + + S S   G  H  +   DG+VF 
Sbjct: 64  NDEIFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGP-HIVLATTDGEVFT 122

Query: 430 WGWNKYGQLGLGDV--------IDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           WG N Y QLG G          I  N+ ++  IE      VACG +H+L+L
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIE------VACGSYHSLVL 167


>gi|74200231|dbj|BAE22920.1| unnamed protein product [Mus musculus]
          Length = 681

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 95/171 (55%), Gaps = 4/171 (2%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           ++CG  H+A++T    L  FG   +GQ G GS    + P C+ +L   +++  A G  HT
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 137

Query: 365 ICISSDGDVYAFGGNQFGQLGTGG-DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
           +  +  G VYA GGN  GQLG G  D  +T  +++     + +  K +S GA  +A + +
Sbjct: 138 LVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTI--KQLSAGANTSAALTE 195

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAV 474
           DGK+F WG N  GQ+GL D  +  IP +VT+ G     ++CG++H+  + +
Sbjct: 196 DGKLFMWGDNSEGQIGLEDKSNVCIPHEVTV-GKPISWISCGYYHSAFVTM 245



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 139/298 (46%), Gaps = 45/298 (15%)

Query: 213 CLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR-----IRMVSSPHP 267
           C+  L P  ++   A G  HTL  +D G V+  G   EGQLGLG          +    P
Sbjct: 118 CIKALKPE-KVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTP 176

Query: 268 IPCIES-SYGKDRSAALSRGSV------NSEG------------PGFRVPGNYVKGIACG 308
              I+  S G + SAAL+          NSEG            P     G  +  I+CG
Sbjct: 177 ADTIKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISWISCG 236

Query: 309 GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVS--SLLGI--QIEGVAAGLWHT 364
             HSA +T  G L TFG    G+ G     +EL  N  S   +LGI  ++  VA G  HT
Sbjct: 237 YYHSAFVTMDGELYTFGEPENGKLG---LPNELLMNHRSPQRVLGIPERVIQVACGGGHT 293

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAET-LPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
           + ++ +  VYAFG  QFGQLG G    ET  P++++   +++     +SCG  HTA++ +
Sbjct: 294 VVLT-EKVVYAFGLGQFGQLGLGTFLFETSEPKIIE--RIKDQKICHISCGENHTALMTE 350

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC------VPRNVACGWWHTLLLAVP 475
            G ++ +G  ++G+LGLG     N  +Q     C        + +ACG  H L+ A P
Sbjct: 351 LGLLYTFGDGRHGKLGLG---MENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVFATP 405



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 111/254 (43%), Gaps = 40/254 (15%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
           ++ G  HT  ++   +++ +G    GQLGLGS+  ++       CI++            
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKP----TCIKA------------ 121

Query: 286 GSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNC 345
                      +    VK  ACG  H+ V TD G +   G    GQ G G TDD  + + 
Sbjct: 122 -----------LKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQ 170

Query: 346 VSSLL-GIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLE 404
           +        I+ ++AG   +  ++ DG ++ +G N  GQ+G        +P        E
Sbjct: 171 IVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPH-------E 223

Query: 405 NVHSKS---VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPR- 460
               K    +SCG  H+A +  DG+++ +G  + G+LGL + +  N  S   + G   R 
Sbjct: 224 VTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERV 283

Query: 461 -NVACGWWHTLLLA 473
             VACG  HT++L 
Sbjct: 284 IQVACGGGHTVVLT 297



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 83/198 (41%), Gaps = 56/198 (28%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
           R+  VA GG HT+ L++   V+ +G G  GQLGLG+ +   S P  I             
Sbjct: 282 RVIQVACGGGHTVVLTE-KVVYAFGLGQFGQLGLGTFLFETSEPKIIE------------ 328

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD--D 339
                         R+    +  I+CG  H+A++T+ G L TFG G +G+ G G  +  +
Sbjct: 329 --------------RIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTN 374

Query: 340 ELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL-- 397
           +  P   S+ L   ++ +A G  H +  ++                         PRL  
Sbjct: 375 QFFPTLCSNFLRFAVQLIACGGCHMLVFAT-------------------------PRLGT 409

Query: 398 LDAPSLENVHSKSVSCGA 415
           +D P  E+V+   +S G+
Sbjct: 410 IDEPKFEDVYEPYISTGS 427


>gi|296189286|ref|XP_002742716.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 3
           [Callithrix jacchus]
          Length = 556

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/176 (36%), Positives = 101/176 (57%), Gaps = 7/176 (3%)

Query: 303 KGIAC----GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS-LLGIQIEGV 357
           K IAC     G H  + T  G + T+G   Y Q G G+T+  L P  +S+ L   Q+  V
Sbjct: 103 KKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV 162

Query: 358 AAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARH 417
           A G +H++ ++SDG+V+A+G N  GQ+G+G    +  PR +    L+N    +++CG   
Sbjct: 163 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPTPRRVTG-CLQNKVVVTIACGQMC 221

Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
              + D G+V+ WG+N  GQLGLG+  ++  P +V  ++G   + VACG+ HTL+L
Sbjct: 222 CMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 277



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 123/253 (48%), Gaps = 31/253 (12%)

Query: 220 GVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
           G +IA ++ G G H +  +  G+V+ WG+    QLG G+     ++   +PC  S+    
Sbjct: 102 GKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT-----TNHGLVPCHIST---- 152

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
                             +    V  +ACG  HS V+T  G +  +G+   GQ G GST 
Sbjct: 153 -----------------NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTV 195

Query: 339 DELSPNCVSSLLGIQIE-GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
           ++ +P  V+  L  ++   +A G    + +   G+VY +G N  GQLG G    +  P  
Sbjct: 196 NQPTPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTP-- 253

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE-G 456
               +L+ +  + V+CG  HT V+ D+G+V+ WG N YGQLG G+  +++ P+ VT+E  
Sbjct: 254 CRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKD 313

Query: 457 CVPRNVACGWWHT 469
            +    AC   HT
Sbjct: 314 RIIEIAACHSTHT 326



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 109/231 (47%), Gaps = 30/231 (12%)

Query: 203 SGDENLSAFPCLVTLN-PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +G  N    PC ++ N    ++  VA G  H+L L+  G+V+ WGY   GQ+G GS +  
Sbjct: 138 NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ 197

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
            +      C+++                            V  IACG      + D+G +
Sbjct: 198 PTPRRVTGCLQN--------------------------KVVVTIACGQMCCMAVVDSGEV 231

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             +G+   GQ G G++ ++ +P  V++L GI+++ VA G  HT+ ++ +G VYA+G N +
Sbjct: 232 YVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSY 291

Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           GQLGTG    ++ P  +       +  +  +C + HT A     G V+ WG
Sbjct: 292 GQLGTGNKSNQSYPTPVTVEKDRII--EIAACHSTHTSAAKTQGGHVYMWG 340



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 15/111 (13%)

Query: 370 DGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFC 429
           + +++  G N  G LG G  Q+   PR LD+ S + +   S   G  H  +   +G+VF 
Sbjct: 69  NDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGP-HIVLATTEGEVFT 127

Query: 430 WGWNKYGQLGLGDV--------IDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           WG N Y QLG G          I  N+ ++  IE      VACG +H+L+L
Sbjct: 128 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIE------VACGSYHSLVL 172



 Score = 38.9 bits (89), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 54/132 (40%), Gaps = 17/132 (12%)

Query: 14  VFMWGYL-PGALPQRSPILSPLVVRLP--LTVGSAWRDVCGGGCGFAMAISDSRKLITWG 70
           VF WGY   G +   S +  P   R+   L         CG  C   MA+ DS ++  WG
Sbjct: 178 VFAWGYNNSGQVGSGSTVNQPTPRRVTGCLQNKVVVTIACGQMC--CMAVVDSGEVYVWG 235

Query: 71  STDDLGQSYVTSGKHGEIPEPFPLPTEASI--VKAAAGWAHCVAVTEGGEVYTWGWKECV 128
                G   +  G  G  P P  +     I   + A G+AH + +T+ G+VY WG     
Sbjct: 236 YN---GNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG----- 287

Query: 129 PSGRVFGDLSTG 140
                +G L TG
Sbjct: 288 --ANSYGQLGTG 297


>gi|356539788|ref|XP_003538375.1| PREDICTED: uncharacterized protein LOC100794953 [Glycine max]
          Length = 1046

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/171 (35%), Positives = 99/171 (57%), Gaps = 4/171 (2%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V  IA GG+H+A++T  G +  +G G +G+ GQ    D  SP  V SL G+ ++ VA G 
Sbjct: 306 VHNIALGGKHAALVTKQGEVFCWGQGKWGRLGQKIDMDISSPKIVDSLNGLHVKTVACGE 365

Query: 362 WHTICISSDGDVYAFGGNQF--GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
           +HT  ++  G+VY +G +      L  G  +++ +P+ L  P L+ +   SV+CG  HTA
Sbjct: 366 YHTCALTDSGEVYTWGNDVCCADLLNEGRTRSQWIPQRLGGP-LDGISISSVACGEWHTA 424

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
           +++  G++F +G   +G LG GD+   + P +V ++ G   R+ ACG WHT
Sbjct: 425 IVSSCGRLFTYGDGTFGVLGHGDLRSYSSPKEVESLNGLRVRSAACGSWHT 475



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 78/280 (27%), Positives = 129/280 (46%), Gaps = 40/280 (14%)

Query: 205 DENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSS 264
           D ++S+   + +LN G+ + TVA G  HT AL+D G+V+ WG                  
Sbjct: 341 DMDISSPKIVDSLN-GLHVKTVACGEYHTCALTDSGEVYTWG------------------ 381

Query: 265 PHPIPCIES-SYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLT 323
            + + C +  + G+ RS  + +      GP   + G  +  +ACG  H+A+++  G L T
Sbjct: 382 -NDVCCADLLNEGRTRSQWIPQ---RLGGP---LDGISISSVACGEWHTAIVSSCGRLFT 434

Query: 324 FGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI-----------SSDGD 372
           +G G +G  G G      SP  V SL G+++   A G WHT  I           S+ G 
Sbjct: 435 YGDGTFGVLGHGDLRSYSSPKEVESLNGLRVRSAACGSWHTAAIVEVMFDRFRYNSASGK 494

Query: 373 VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGW 432
           ++ +G    G+LG   +  + +P  +    L +     VSCG   T  + + GKVF  G 
Sbjct: 495 LFTWGDGDEGRLGHVDNGNKIVPTRV--TQLVDYDFVQVSCGRMLTVALTNMGKVFAMGS 552

Query: 433 NKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
            KYGQLG     D+ +  +  ++    + ++ G +H  +L
Sbjct: 553 AKYGQLGNPHARDKVVIVEGQLKQEFVKVISTGSYHVAVL 592



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 111/244 (45%), Gaps = 41/244 (16%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G+ I++VA G  HT  +S  G+++ +G G  G LG G  +R  SSP  +  +        
Sbjct: 410 GISISSVACGEWHTAIVSSCGRLFTYGDGTFGVLGHGD-LRSYSSPKEVESLN------- 461

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITD-----------AGALLTFGWGL 328
                         G RV     +  ACG  H+A I +           +G L T+G G 
Sbjct: 462 --------------GLRV-----RSAACGSWHTAAIVEVMFDRFRYNSASGKLFTWGDGD 502

Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGG 388
            G+ G     +++ P  V+ L+      V+ G   T+ +++ G V+A G  ++GQLG   
Sbjct: 503 EGRLGHVDNGNKIVPTRVTQLVDYDFVQVSCGRMLTVALTNMGKVFAMGSAKYGQLGNPH 562

Query: 389 DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNI 448
            + + +   +    L+    K +S G+ H AV+   G V+ WG  + GQLGLGD  DR  
Sbjct: 563 ARDKVV---IVEGQLKQEFVKVISTGSYHVAVLTSAGSVYTWGRGEIGQLGLGDTEDRYT 619

Query: 449 PSQV 452
           P  V
Sbjct: 620 PCFV 623



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 73/137 (53%), Gaps = 6/137 (4%)

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
           L P  + S   + +  +A G  H   ++  G+V+ +G  ++G+LG   D   + P+++D 
Sbjct: 293 LVPKLLESTAMLDVHNIALGGKHAALVTKQGEVFCWGQGKWGRLGQKIDMDISSPKIVD- 351

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNK--YGQLGLGDVIDRNIPSQV--TIEG 456
            SL  +H K+V+CG  HT  + D G+V+ WG +      L  G    + IP ++   ++G
Sbjct: 352 -SLNGLHVKTVACGEYHTCALTDSGEVYTWGNDVCCADLLNEGRTRSQWIPQRLGGPLDG 410

Query: 457 CVPRNVACGWWHTLLLA 473
               +VACG WHT +++
Sbjct: 411 ISISSVACGEWHTAIVS 427



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 71/158 (44%), Gaps = 30/158 (18%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P  VT         V+ G   T+AL+++G+V+  G    GQLG         +PH     
Sbjct: 517 PTRVTQLVDYDFVQVSCGRMLTVALTNMGKVFAMGSAKYGQLG---------NPH----- 562

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
                +D+   +  G +  E         +VK I+ G  H AV+T AG++ T+G G  GQ
Sbjct: 563 ----ARDK-VVIVEGQLKQE---------FVKVISTGSYHVAVLTSAGSVYTWGRGEIGQ 608

Query: 332 CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT--ICI 367
            G G T+D  +P  V +L   Q+  +  G   T  IC+
Sbjct: 609 LGLGDTEDRYTPCFVEALRDRQVNTITCGPSFTAAICL 646


>gi|224043006|ref|XP_002197493.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Taeniopygia guttata]
          Length = 4839

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/266 (30%), Positives = 127/266 (47%), Gaps = 30/266 (11%)

Query: 212 PCLVTLNPGVRIATVAA--GGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP 269
           P LV       I  +AA   G H LALS  G+V+ WG G  G+LG G  + +   P  I 
Sbjct: 485 PQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPL-EEPKMIS 543

Query: 270 CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
            +                           G +V  IACG  +SA IT  G L T+G G Y
Sbjct: 544 ALSGKQA----------------------GKHVVHIACGSTYSAAITAEGELYTWGRGNY 581

Query: 330 GQCGQGSTDDELSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTG 387
           G+ G GS++D+  P  V+ L G+++  V+  +G   T+ ++ +G V+++G   +G+LG G
Sbjct: 582 GRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 641

Query: 388 GDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
           G      P+L++   L+++    V CG++ +  +  DG+V+ WG     +LG G      
Sbjct: 642 GSDGCKTPKLIE--KLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVR 699

Query: 448 IPSQVT-IEGCVPRNVACGWWHTLLL 472
            P  +  ++G    +VA G  H L L
Sbjct: 700 YPKLLEGLKGKKVIDVAAGSTHCLAL 725



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 85/306 (27%), Positives = 130/306 (42%), Gaps = 80/306 (26%)

Query: 218  NPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
            N  V+   V +GGRH +AL+  G+V+ WG G +G+LG  SR+     P  I  +++   +
Sbjct: 3048 NYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIR 3106

Query: 278  DRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST 337
            D                          IACG  HSA IT +G L T+G G YG+ G G  
Sbjct: 3107 D--------------------------IACGSSHSAAITSSGELYTWGLGEYGRLGHGDN 3140

Query: 338  DDELSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLP 395
              +L P  V  LLG ++  VA G     T+ ++ +G V+++G   FG+LG GG +   +P
Sbjct: 3141 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIP 3200

Query: 396  RLLDAPSLE------------------------------------NVHSKS--------- 410
            + ++  + +                                    +VH +          
Sbjct: 3201 QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRG 3260

Query: 411  -----VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVAC 464
                 V+ GA H   + D G+V+ WG N +GQ G G       P+ V  +EG     VAC
Sbjct: 3261 KKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVAC 3320

Query: 465  GWWHTL 470
            G  H++
Sbjct: 3321 GSSHSV 3326



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 144/365 (39%), Gaps = 82/365 (22%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V   +G  HC+A++  GEVY+WG  E         D   G G ++   +R    + E + 
Sbjct: 4047 VAVNSGGKHCLALSFEGEVYSWGEAE---------DGKLGHG-NRSPCDRPR--VIESLR 4094

Query: 161  PRSQVSRSSGGTSSG-TDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
                V  ++GG  S      G      K R   L          GD      P LV    
Sbjct: 4095 GIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGH--------GDSEDQLKPKLVEALQ 4146

Query: 220  GVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
            G R+  +A  +G   TL L+D   VW WG G  G+LG G                   G 
Sbjct: 4147 GYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-------------------GS 4187

Query: 278  DRSAALSRGSVNSEGPGFRVPGNY-------VKGIACGGRHSAVITDAGALLTFGWGLYG 330
            D               G +VP          V  + CG + S  +T +GA+ T+G G Y 
Sbjct: 4188 D---------------GCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4232

Query: 331  QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            + G GS D    P  V  L G ++  +A G  H +C + DG+VY +G N  GQLG G   
Sbjct: 4233 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTN 4292

Query: 391  AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
            A   PRL+ A  L+      V+CG+ HT           W  +K    G        +P+
Sbjct: 4293 AIQRPRLVAA--LQGKKINRVACGSAHT---------LAWSTSKPANAG-------KLPT 4334

Query: 451  QVTIE 455
            QV +E
Sbjct: 4335 QVPME 4339



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 108/401 (26%), Positives = 164/401 (40%), Gaps = 60/401 (14%)

Query: 53   GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
              G   A +   K+  WG  +D  Q     G   ++P      +  ++V+ A G     A
Sbjct: 2952 AAGLESAATIRTKVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 3010

Query: 113  VTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGT 172
            VT  G+VY  G      +GR+   +S+GT        RQ + L+  V  +  V+  SGG 
Sbjct: 3011 VTVEGKVYACGE---ATNGRLGLGISSGTV----PIPRQITALSNYVVKK--VAVHSGGR 3061

Query: 173  SS---GTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIAT 225
             +     DG+    G G++G         K    S  + D+     P L+      RI  
Sbjct: 3062 HAMALTVDGKVFSWGEGDDG---------KLGHFSRMNCDK-----PRLIEALKTKRIRD 3107

Query: 226  VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS-----RIRMVSSPHPIPCIESSYGKDRS 280
            +A G  H+ A++  G+++ WG G  G+LG G      + +MV        I+ + G   +
Sbjct: 3108 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3167

Query: 281  AALS---RGSVNSEGPG-------------------FRVPGNYVKGIACGGRHSAVITDA 318
              L+    G V S G G                    R+ G  V  I CG + S  +T +
Sbjct: 3168 QTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3227

Query: 319  GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
            G + T+G G Y + G G+      P  V  L G +I  VA G  H + ++  G VYA+G 
Sbjct: 3228 GVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGD 3287

Query: 379  NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            N  GQ G G       P L+    LE      V+CG+ H+ 
Sbjct: 3288 NDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 3326



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 128/278 (46%), Gaps = 54/278 (19%)

Query: 225  TVAAGGRHTLALSDIGQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAA 282
            T++AGG         G ++GWG+   GQLG   G+++++     P PC   +    R   
Sbjct: 3950 TLSAGGS--------GTIYGWGHNHRGQLGGIEGAKVKV-----PTPC--EALATLRPVQ 3994

Query: 283  LSRG-----SVNSEGPGF-------------------------RVPGNYVKGIAC--GGR 310
            L  G     +V ++G  +                          +   ++K +A   GG+
Sbjct: 3995 LIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGK 4054

Query: 311  HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
            H   ++  G + ++G    G+ G G+      P  + SL GI++  +AAG  H+ CI++ 
Sbjct: 4055 HCLALSFEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAA 4114

Query: 371  GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGA--RHTAVIADDGKVF 428
            GD++ +G  ++G+LG G  + +  P+L++A  L+      ++CG+    T  + DD  V+
Sbjct: 4115 GDLFTWGKGRYGRLGHGDSEDQLKPKLVEA--LQGYRVIDIACGSGDAQTLCLTDDDTVW 4172

Query: 429  CWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
             WG   YG+LG G      +P ++ ++ G     V CG
Sbjct: 4173 SWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECG 4210



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 121/276 (43%), Gaps = 48/276 (17%)

Query: 205  DENLSAFPCLVT---------LNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG- 254
            DE+L+A P L +          N G  +   AAG      +    +V+ WG   + QLG 
Sbjct: 2921 DEDLAAVPFLASDNEEEDDDKPNTGSLVRKKAAGLESAATIR--TKVFVWGLNDKDQLGG 2978

Query: 255  -LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSA 313
              GS+I++            S+ +  SA                  N V+ +A G +   
Sbjct: 2979 LKGSKIKV-----------PSFSETLSAL-----------------NVVQ-VAGGSKSLF 3009

Query: 314  VITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVA--AGLWHTICISSD 370
             +T  G +   G    G+ G G +   +  P  +++L    ++ VA  +G  H + ++ D
Sbjct: 3010 AVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVD 3069

Query: 371  GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
            G V+++G    G+LG         PRL++A  L+    + ++CG+ H+A I   G+++ W
Sbjct: 3070 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEA--LKTKRIRDIACGSSHSAAITSSGELYTW 3127

Query: 431  GWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACG 465
            G  +YG+LG GD   +  P  V +  G     VACG
Sbjct: 3128 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3163



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 93/217 (42%), Gaps = 38/217 (17%)

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
           SS D+ +   P LVT   G+++  V+  +G   TLA+++ GQVW WG G  G+LG G   
Sbjct: 588 SSEDQTI---PMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRG--- 641

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITD 317
                                     GS   + P    ++    +  + CG + S  +T 
Sbjct: 642 --------------------------GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTK 675

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
            G + T+G G   + G G+ +    P  +  L G ++  VAAG  H + ++ D +V+++G
Sbjct: 676 DGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWG 735

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
            N   Q         T P     P L+  H   ++CG
Sbjct: 736 SND--QCQHFDTLRITKPEPAALPGLDTKHIVGIACG 770



 Score = 43.1 bits (100), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 3/78 (3%)

Query: 48  DVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAA 105
           D+    CG  F++A++   ++ TWG  D+    + T  +H   P+         ++  AA
Sbjct: 659 DIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTE-EHVRYPKLLEGLKGKKVIDVAA 717

Query: 106 GWAHCVAVTEGGEVYTWG 123
           G  HC+A+TE  EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 5/73 (6%)

Query: 53   GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
            G  F++A++ S  + TWG  D   LG     S  H   P          ++  A G  HC
Sbjct: 4210 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRRPRQVQGLQGKKVIAIATGSLHC 4266

Query: 111  VAVTEGGEVYTWG 123
            V  TE GEVYTWG
Sbjct: 4267 VCCTEDGEVYTWG 4279


>gi|8131934|gb|AAF73143.1|AF148800_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
           familiaris]
          Length = 918

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 58/170 (34%), Positives = 92/170 (54%), Gaps = 2/170 (1%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           ++CG  H+AV+T    L  FG   +GQ G GS      P CV +L   +++  A G  HT
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT 99

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           +  +  G VYA GGN  GQLG G  +  +   L+   + +    K +S G+  +A + +D
Sbjct: 100 LVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQR-KIKQLSAGSNTSAALTED 158

Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAV 474
           G++F WG N  GQ+GL +V +  +P QVT+ G     ++CG++H+  +  
Sbjct: 159 GELFMWGDNSEGQIGLENVTNVCVPQQVTV-GKPISWISCGYYHSAFVTT 207



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 144/301 (47%), Gaps = 51/301 (16%)

Query: 213 CLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR--------IRMVSS 264
           C+  L P  ++   A G  HTL  ++ G+V+  G   EGQLGLG          I   +S
Sbjct: 80  CVKALKPE-KVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTS 138

Query: 265 PHPIPCIESSYGKDRSAALSRGSV------NSEG------------PGFRVPGNYVKGIA 306
              I  +  S G + SAAL+          NSEG            P     G  +  I+
Sbjct: 139 QRKIKQL--SAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVGKPISWIS 196

Query: 307 CGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL-----SPNCVSSLLGIQIEGVAAGL 361
           CG  HSA +T  G L TFG     +CG+    ++L      P  V  + G  ++ VA G 
Sbjct: 197 CGYYHSAFVTTEGQLYTFGEP---ECGKLGLPNQLLVNHRMPQPVPGIPGKVVQ-VACGG 252

Query: 362 WHTICISSDGDVYAFGGNQFGQLGTGGDQAET-LPRLLDAPSLENVHSKSVS---CGARH 417
            HT+ ++    VY FG  QFGQLG G    ET +P+     ++E++  + +S   CG  H
Sbjct: 253 GHTVVLTEKA-VYTFGLGQFGQLGLGTFLFETSVPK-----AIEHIKDQKISFIACGENH 306

Query: 418 TAVIADDGKVFCWGWNKYGQLGLG--DVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLAV 474
           TA+I D G ++ +G  ++G+LGLG  +  ++ IP+  +     + + V+CG  HTL+ A 
Sbjct: 307 TALITDMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGGCHTLVFAT 366

Query: 475 P 475
           P
Sbjct: 367 P 367



 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 93/331 (28%), Positives = 141/331 (42%), Gaps = 68/331 (20%)

Query: 103 AAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPR 162
           AA G  H +  TEGG+VY  G       G   G L  G   ++  F    SF T Q   +
Sbjct: 92  AACGRNHTLVSTEGGKVYAAG-------GNNEGQLGLGDTEERSTF-HLISFFTSQRKIK 143

Query: 163 SQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLN 218
              + S+   +   DG     G   EG    +I L            EN++       + 
Sbjct: 144 QLSAGSNTSAALTEDGELFMWGDNSEG----QIGL------------ENVTNVCVPQQVT 187

Query: 219 PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI----RMVSSPHPIPCIESS 274
            G  I+ ++ G  H+  ++  GQ++ +G    G+LGL +++    RM   P P+P I   
Sbjct: 188 VGKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRM---PQPVPGI--- 241

Query: 275 YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
                                  PG  V+ +ACGG H+ V+T+  A+ TFG G +GQ G 
Sbjct: 242 -----------------------PGKVVQ-VACGGGHTVVLTEK-AVYTFGLGQFGQLGL 276

Query: 335 GSTDDELS-PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQA-- 391
           G+   E S P  +  +   +I  +A G  HT  I+  G +Y FG  + G+LG G + +  
Sbjct: 277 GTFLFETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLGLGLENSTN 336

Query: 392 ETLPRLLDAPSLENVHSKSVSCGARHTAVIA 422
           + +P L    +      + VSCG  HT V A
Sbjct: 337 QFIPTL--CSNFLRFIVQLVSCGGCHTLVFA 365



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 120/265 (45%), Gaps = 62/265 (23%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
           ++ G  HT  ++   +++ +G    GQLGLGS+   VS P    C+++            
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSK-STVSKP---TCVKA------------ 83

Query: 286 GSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNC 345
                      +    VK  ACG  H+ V T+ G +   G    GQ G G T++  + + 
Sbjct: 84  -----------LKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHL 132

Query: 346 VSSLLGI-QIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLE 404
           +S      +I+ ++AG   +  ++ DG+++ +G N  GQ+G                 LE
Sbjct: 133 ISFFTSQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIG-----------------LE 175

Query: 405 NVHSKSV-------------SCGARHTAVIADDGKVFCWGWNKYGQLGLGD--VIDRNIP 449
           NV +  V             SCG  H+A +  +G+++ +G  + G+LGL +  +++  +P
Sbjct: 176 NVTNVCVPQQVTVGKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMP 235

Query: 450 SQVT-IEGCVPRNVACGWWHTLLLA 473
             V  I G V + VACG  HT++L 
Sbjct: 236 QPVPGIPGKVVQ-VACGGGHTVVLT 259


>gi|27923073|gb|AAO27475.1| HERC2 [Homo sapiens]
          Length = 328

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 121/253 (47%), Gaps = 32/253 (12%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           V+   V +GGRH  AL+  G+V+ WG G +G+LG  SR+     P  I  +++   +D  
Sbjct: 85  VKKVAVHSGGRHATALTVDGKVFWWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRD-- 141

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                   IACG  HSA +T +G L T+G G YG+ G G    +
Sbjct: 142 ------------------------IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ 177

Query: 341 LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           L P  V  LLG ++  VA G     T+ ++ +G V+++G   FG+LG GG +   +P+ +
Sbjct: 178 LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNI 237

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGC 457
           +  + + V    + CGA+ +  +   G V+ WG   Y +LG G  +    P  V  + G 
Sbjct: 238 ERLNGQGV--CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGK 295

Query: 458 VPRNVACGWWHTL 470
              +VA G  H L
Sbjct: 296 KIVHVAVGALHCL 308



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 115/264 (43%), Gaps = 29/264 (10%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P        + +  VA G +   A++  G+V+  G    G+LGLG     V  P  I  +
Sbjct: 21  PSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITAL 80

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
            SSY   + A  S                       GGRH+  +T  G +  +G G  G+
Sbjct: 81  -SSYVVKKVAVHS-----------------------GGRHATALTVDGKVFWWGEGDDGK 116

Query: 332 CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
            G  S  +   P  + +L   +I  +A G  H+  ++S G++Y +G  ++G+LG G +  
Sbjct: 117 LGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT 176

Query: 392 ETLPRLLDAPSLENVHSKSVSCGAR--HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIP 449
           +  P+++    L       V+CG+R   T  + D+G VF WG   +G+LG G     NIP
Sbjct: 177 QLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIP 234

Query: 450 SQVT-IEGCVPRNVACGWWHTLLL 472
             +  + G     + CG   +L L
Sbjct: 235 QNIERLNGQGVCQIECGAQFSLAL 258



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 91/332 (27%), Positives = 139/332 (41%), Gaps = 55/332 (16%)

Query: 87  EIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKD 146
           ++P      +  ++V+ A G     AVT  G+VY  G      +GR+   +S+GT     
Sbjct: 19  KVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE---ATNGRLGLGISSGTVPIPR 75

Query: 147 VFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAESSS 202
                SS++ ++V+  S    ++  T    DG+    G G++G         K    S  
Sbjct: 76  QITALSSYVVKKVAVHSGGRHATALT---VDGKVFWWGEGDDG---------KLGHFSRM 123

Query: 203 SGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG-------- 254
           + D+     P L+      RI  +A G  H+ AL+  G+++ WG G  G+LG        
Sbjct: 124 NCDK-----PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQL 178

Query: 255 --------LGSRIRMVS----SPHPIPCIES----SYGKDRSAALSRGSVNSEGPGF--- 295
                   LG R+  V+        +   +     S+G      L RG   SEG      
Sbjct: 179 KPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG--GSEGCNIPQN 236

Query: 296 --RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ 353
             R+ G  V  I CG + S  +T +G + T+G G Y + G GS      P  V  L G +
Sbjct: 237 IERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK 296

Query: 354 IEGVAAGLWHTICISSDGDVYAFGGNQFGQLG 385
           I  VA G  H + ++  G VYA+G N  GQ G
Sbjct: 297 IVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 328


>gi|356526548|ref|XP_003531879.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Glycine max]
          Length = 474

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 107/367 (29%), Positives = 151/367 (41%), Gaps = 59/367 (16%)

Query: 89  PEPFPLP--TEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKD 146
           PE F  P  T A  +  A G  H  A+   G ++TWG  +       FG L  GT   + 
Sbjct: 49  PELFGCPAGTNACWLDVACGREHTAAIASDGSLFTWGAND-------FGQLGDGTEERRK 101

Query: 147 VFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDE 206
             E+     +E V   S  +  S   +   +  GS       RR+ +  Q   S+     
Sbjct: 102 HPEKVKQLESEFVKSVSCGAHCSACIAEPRENDGS----ISTRRLWVWGQNQGSN----- 152

Query: 207 NLSAFPCLV--TLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSS 264
                P L      P   I  V+ G  H +ALSD G +  WGY   GQLG G     +  
Sbjct: 153 ----LPRLFWGAFKPNTIIREVSCGAVHVVALSDEGLLQAWGYNECGQLGRGVTCEGLQG 208

Query: 265 PHPIPCIESSYGK--DRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL 322
            H I    SSY K  D +  L +                +  ++CG  H+A I+D G + 
Sbjct: 209 AHII----SSYAKFLDEAPELVK----------------IAKVSCGEYHTAAISDKGEVY 248

Query: 323 TFGWGLYGQCGQGST---DDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN 379
           T+G G  GQ G  S    D EL P  V +L GI I+ VA G  HT  ++  G +Y +GG 
Sbjct: 249 TWGLGNMGQLGHSSLQYGDKELLPRRVVTLDGIFIKDVACGGVHTCALTQGGALYTWGGG 308

Query: 380 ---------QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
                    Q G      + ++T  R +    +     + V+CG  HT +   DG++  W
Sbjct: 309 QSGQLGLGPQTGLFSCVANDSQTFFRNIPVLVVPK-GVQLVACGHSHTLISMSDGRIHGW 367

Query: 431 GWNKYGQ 437
           G+N YGQ
Sbjct: 368 GYNNYGQ 374



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 81/286 (28%), Positives = 126/286 (44%), Gaps = 65/286 (22%)

Query: 242 VWGWGYGGEGQLGLGSRIRMVSSPHPIP-----C--------IESSYGKDRSAAL-SRGS 287
           ++ WGY   GQ G   +   +  P  +P     C        ++ + G++ +AA+ S GS
Sbjct: 21  IYVWGYNQSGQTGRKGKEDQLRIPKQLPPELFGCPAGTNACWLDVACGREHTAAIASDGS 80

Query: 288 VNSEGPG-------------------FRVPGNYVKGIACGGRHSAVITDA----GALLTF 324
           + + G                      ++   +VK ++CG   SA I +     G++ T 
Sbjct: 81  LFTWGANDFGQLGDGTEERRKHPEKVKQLESEFVKSVSCGAHCSACIAEPRENDGSISTR 140

Query: 325 GWGLYGQCGQGSTDDEL-----SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN 379
              ++GQ  QGS    L      PN +       I  V+ G  H + +S +G + A+G N
Sbjct: 141 RLWVWGQ-NQGSNLPRLFWGAFKPNTI-------IREVSCGAVHVVALSDEGLLQAWGYN 192

Query: 380 QFGQLG--------TGGDQAETLPRLLD-APSLENVHSKSVSCGARHTAVIADDGKVFCW 430
           + GQLG         G     +  + LD AP L  V    VSCG  HTA I+D G+V+ W
Sbjct: 193 ECGQLGRGVTCEGLQGAHIISSYAKFLDEAPEL--VKIAKVSCGEYHTAAISDKGEVYTW 250

Query: 431 GWNKYGQLGLGDVI--DRNIPSQ--VTIEGCVPRNVACGWWHTLLL 472
           G    GQLG   +   D+ +  +  VT++G   ++VACG  HT  L
Sbjct: 251 GLGNMGQLGHSSLQYGDKELLPRRVVTLDGIFIKDVACGGVHTCAL 296



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/110 (36%), Positives = 55/110 (50%), Gaps = 7/110 (6%)

Query: 373 VYAFGGNQFGQLGTGGDQAETL------PRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           +Y +G NQ GQ G  G + +        P L   P+  N     V+CG  HTA IA DG 
Sbjct: 21  IYVWGYNQSGQTGRKGKEDQLRIPKQLPPELFGCPAGTNACWLDVACGREHTAAIASDGS 80

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLAVP 475
           +F WG N +GQLG G    R  P +V  +E    ++V+CG   +  +A P
Sbjct: 81  LFTWGANDFGQLGDGTEERRKHPEKVKQLESEFVKSVSCGAHCSACIAEP 130


>gi|444729789|gb|ELW70193.1| putative E3 ubiquitin-protein ligase HERC3 [Tupaia chinensis]
          Length = 983

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 140/308 (45%), Gaps = 51/308 (16%)

Query: 84  KHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGL 143
           + G  PE      +  I+  A G +H +A+++ G++++WG      +G   G L   T  
Sbjct: 70  REGNKPEQIGALADQHIIHVACGESHSLALSDQGQLFSWG------AGSD-GQLGLMTTE 122

Query: 144 DKDVFERQSSFLTEQVSPRSQVSRSSGG---TSSGTDGRGSGEEGSKRRRISLAKQTAES 200
           D     R    L ++++ ++ +  S G     +   DG+      +   ++ L K+    
Sbjct: 123 DSVAVPR----LIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 201 SSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR 260
           +S         P  V    G+ +A VAAGG H+ ALS  G V+GWG    GQLGL     
Sbjct: 179 AS---------PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE-- 227

Query: 261 MVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA 320
                           KDR +      + ++          V  I+CG  H+AV+T +G 
Sbjct: 228 ----------------KDRESPCHVKLLRTQK---------VVYISCGEEHTAVLTKSGG 262

Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFGGN 379
           + TFG G  GQ G  S +DE++P  V  L+G ++  +A G  HT+  + S G +YAFG  
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 380 QFGQLGTG 387
             GQLGTG
Sbjct: 323 ARGQLGTG 330



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 112/251 (44%), Gaps = 30/251 (11%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
            I  VA G  H+LALSD GQ++ WG G +GQLGL +    V+ P  I             
Sbjct: 85  HIIHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ------------ 132

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDE 340
                         ++    +  ++CG  H   +   G   T+G   +GQ G G     +
Sbjct: 133 --------------KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
            SP  V SL GI +  VAAG  H+  +S  G V+ +G N  GQLG   ++    P  +  
Sbjct: 179 ASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKL 238

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVP 459
              + V    +SCG  HTAV+   G VF +G    GQLG   + D   P +V  + G   
Sbjct: 239 LRTQKV--VYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEV 296

Query: 460 RNVACGWWHTL 470
             +ACG  HTL
Sbjct: 297 TQIACGRQHTL 307



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 118/255 (46%), Gaps = 38/255 (14%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  VA GG H++ L + G+V+  G   +GQLG     R  + P  I  +           
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG---HEREGNKPEQIGALAD--------- 83

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                             ++  +ACG  HS  ++D G L ++G G  GQ G  +T+D ++
Sbjct: 84  -----------------QHIIHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVA 126

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD-QAETLPRLLDA 400
            P  +  L    I  V+ G WH + +++DG  + +G N  GQLG G +  ++  P+    
Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQ--RV 184

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI---EGC 457
            SLE +    V+ G  H+  ++  G VF WG N  GQLGL D  DR  P  V +   +  
Sbjct: 185 RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKV 244

Query: 458 VPRNVACGWWHTLLL 472
           V   ++CG  HT +L
Sbjct: 245 V--YISCGEEHTAVL 257



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 92/369 (24%), Positives = 144/369 (39%), Gaps = 79/369 (21%)

Query: 39  PLTVGS-AWRDVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLP 95
           P  +G+ A + +    CG   ++A+SD  +L +WG+  D     +T+     +P      
Sbjct: 75  PEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 96  TEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFL 155
            + +I++ + G  HC+A+   G+ +TWG           G L    GL K+         
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWG-------KNSHGQL----GLGKE--------F 175

Query: 156 TEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLA-------KQTAESSSSGDENL 208
             Q SP  Q  RS  G        G    G+    +SL+          A      DE  
Sbjct: 176 PSQASP--QRVRSLEGIPLAQVAAG----GAHSFALSLSGAVFGWGMNNAGQLGLSDEKD 229

Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
              PC V L    ++  ++ G  HT  L+  G V+ +G G  GQLG  S   M    +P 
Sbjct: 230 RESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDS---MNDEVNPR 286

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHS-AVITDAGALLTFGWG 327
             +E                        + G+ V  IACG +H+ A +  +G +  FG G
Sbjct: 287 RVLE------------------------LMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLG 385
             GQ G G T +   P+ V             G W  H+  +S+  D + +  +   Q+ 
Sbjct: 323 ARGQLGTGHTCNVKCPSPVK------------GYWAAHSGQLSARADRFKY--HIVKQIF 368

Query: 386 TGGDQAETL 394
           +GGDQ   L
Sbjct: 369 SGGDQTFVL 377



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 62/124 (50%), Gaps = 10/124 (8%)

Query: 354 IEGVAAGLWHTICISSDGDVYAFGGNQFGQLG--TGGDQAETLPRLLDAPSLENVHSKSV 411
           ++ VA G  H++ +  DG+VY  G N  GQLG    G++ E +  L D       H   V
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQIGALADQ------HIIHV 89

Query: 412 SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR-NIPSQV-TIEGCVPRNVACGWWHT 469
           +CG  H+  ++D G++F WG    GQLGL    D   +P  +  +       V+CG WH 
Sbjct: 90  ACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149

Query: 470 LLLA 473
           L LA
Sbjct: 150 LALA 153


>gi|627469|pir||B38919 hypothetical protein 2 - human (fragment)
 gi|40788957|dbj|BAA04945.2| KIAA0032 [Homo sapiens]
          Length = 1054

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 140/308 (45%), Gaps = 51/308 (16%)

Query: 84  KHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGL 143
           + G  PE      +  I+  A G +H +A+++ G++++WG      +G   G L   T  
Sbjct: 74  REGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG------AGSD-GQLGLMTTE 126

Query: 144 DKDVFERQSSFLTEQVSPRSQVSRSSGG---TSSGTDGRGSGEEGSKRRRISLAKQTAES 200
           D     R    L ++++ ++ +  S G     +   DG+      +   ++ L K+    
Sbjct: 127 DSVAVPR----LIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 182

Query: 201 SSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR 260
           +S         P  V    G+ +A VAAGG H+ ALS  G V+GWG    GQLGL     
Sbjct: 183 AS---------PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE-- 231

Query: 261 MVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA 320
                           KDR +      + ++          V  I+CG  H+AV+T +G 
Sbjct: 232 ----------------KDRESPCHVKLLRTQK---------VVYISCGEEHTAVLTKSGG 266

Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFGGN 379
           + TFG G  GQ G  S +DE++P  V  L+G ++  +A G  HT+  + S G +YAFG  
Sbjct: 267 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 326

Query: 380 QFGQLGTG 387
             GQLGTG
Sbjct: 327 ARGQLGTG 334



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 112/251 (44%), Gaps = 30/251 (11%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
            I  VA G  H+LALSD GQ++ WG G +GQLGL +    V+ P  I             
Sbjct: 89  HIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ------------ 136

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDE 340
                         ++    +  ++CG  H   +   G   T+G   +GQ G G     +
Sbjct: 137 --------------KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 182

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
            SP  V SL GI +  VAAG  H+  +S  G V+ +G N  GQLG   ++    P  +  
Sbjct: 183 ASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKL 242

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVP 459
              + V    +SCG  HTAV+   G VF +G    GQLG   + D   P +V  + G   
Sbjct: 243 LRTQKV--VYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEV 300

Query: 460 RNVACGWWHTL 470
             +ACG  HTL
Sbjct: 301 TQIACGRQHTL 311



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 118/255 (46%), Gaps = 38/255 (14%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  VA GG H++ L + G+V+  G   +GQLG     R  + P  I  +           
Sbjct: 40  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG---HEREGNKPEQIGALAD--------- 87

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                             ++  +ACG  HS  ++D G L ++G G  GQ G  +T+D ++
Sbjct: 88  -----------------QHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA 130

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD-QAETLPRLLDA 400
            P  +  L    I  V+ G WH + +++DG  + +G N  GQLG G +  ++  P+    
Sbjct: 131 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQ--RV 188

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI---EGC 457
            SLE +    V+ G  H+  ++  G VF WG N  GQLGL D  DR  P  V +   +  
Sbjct: 189 RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKV 248

Query: 458 VPRNVACGWWHTLLL 472
           V   ++CG  HT +L
Sbjct: 249 V--YISCGEEHTAVL 261



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 92/369 (24%), Positives = 144/369 (39%), Gaps = 79/369 (21%)

Query: 39  PLTVGS-AWRDVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLP 95
           P  +G+ A + +    CG   ++A+SD  +L +WG+  D     +T+     +P      
Sbjct: 79  PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 138

Query: 96  TEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFL 155
            + +I++ + G  HC+A+   G+ +TWG           G L    GL K+         
Sbjct: 139 NQQTILQVSCGNWHCLALAADGQFFTWG-------KNSHGQL----GLGKE--------F 179

Query: 156 TEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLA-------KQTAESSSSGDENL 208
             Q SP  Q  RS  G        G    G+    +SL+          A      DE  
Sbjct: 180 PSQASP--QRVRSLEGIPLAQVAAG----GAHSFALSLSGAVFGWGMNNAGQLGLSDEKD 233

Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
              PC V L    ++  ++ G  HT  L+  G V+ +G G  GQLG  S   M    +P 
Sbjct: 234 RESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDS---MNDEVNPR 290

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHS-AVITDAGALLTFGWG 327
             +E                        + G+ V  IACG +H+ A +  +G +  FG G
Sbjct: 291 RVLE------------------------LMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 326

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLG 385
             GQ G G T +   P+ V             G W  H+  +S+  D + +  +   Q+ 
Sbjct: 327 ARGQLGTGHTCNVKCPSPVK------------GYWAAHSGQLSARADRFKY--HIVKQIF 372

Query: 386 TGGDQAETL 394
           +GGDQ   L
Sbjct: 373 SGGDQTFVL 381



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 62/124 (50%), Gaps = 10/124 (8%)

Query: 354 IEGVAAGLWHTICISSDGDVYAFGGNQFGQLG--TGGDQAETLPRLLDAPSLENVHSKSV 411
           ++ VA G  H++ +  DG+VY  G N  GQLG    G++ E +  L D       H   V
Sbjct: 40  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQIGALADQ------HIIHV 93

Query: 412 SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR-NIPSQV-TIEGCVPRNVACGWWHT 469
           +CG  H+  ++D G++F WG    GQLGL    D   +P  +  +       V+CG WH 
Sbjct: 94  ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 153

Query: 470 LLLA 473
           L LA
Sbjct: 154 LALA 157


>gi|410056351|ref|XP_003954016.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like [Pan
           troglodytes]
          Length = 476

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 60/169 (35%), Positives = 93/169 (55%), Gaps = 2/169 (1%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           ++CG  HSAV+T    L  FG   +GQ G GS      P CV +L   +++  A G  HT
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHT 99

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           +  +  G+VYA GGN  GQLG G  +      ++   + E+   K +S G+  +A + +D
Sbjct: 100 LVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEH-KIKQLSAGSNTSAALTED 158

Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           G++F WG N  GQ+GL +V +  +P QVTI   V   ++CG++H+  + 
Sbjct: 159 GRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSW-ISCGYYHSAFVT 206



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 91/304 (29%), Positives = 133/304 (43%), Gaps = 61/304 (20%)

Query: 213 CLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR--------IRMVSS 264
           C+  L P  ++   A G  HTL  ++ G V+  G   EGQLGLG          I   +S
Sbjct: 80  CVKALKPE-KVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTS 138

Query: 265 PHPIPCIESSYGKDRSAALSRGSV------NSEG------------PGFRVPGNYVKGIA 306
            H I   + S G + SAAL+          NSEG            P     G  V  I+
Sbjct: 139 EHKIK--QLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWIS 196

Query: 307 CGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAG---LWH 363
           CG  HSA +T +G               G++   L P   + L+         G    +H
Sbjct: 197 CGYYHSAFVTSSGL------------ESGNSPISLPPKVTNELVERHSFSRYDGNSVCFH 244

Query: 364 TICIS-----SDGDVYAFGGNQFGQLGTGGDQAET-LPRLLDAPSLENVHSKSVS---CG 414
             C+      S+  VY FG  QFGQLG G    ET  P+++     EN+  +++S   CG
Sbjct: 245 NPCLVFAPFLSENAVYTFGLGQFGQLGLGTFLFETSEPKVI-----ENIRDQTISYISCG 299

Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLG--DVIDRNIPSQVT-IEGCVPRNVACGWWHTLL 471
             HTA+I D G ++ +G  ++G+LGLG  +  +  IP+  +     + + VACG  H ++
Sbjct: 300 ENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVI 359

Query: 472 LAVP 475
            A P
Sbjct: 360 FAAP 363



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 79/312 (25%), Positives = 125/312 (40%), Gaps = 86/312 (27%)

Query: 103 AAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPR 162
           AA G  H +  TEGG VY  G       G   G L  G   +++ F   S F +E     
Sbjct: 92  AACGRNHTLVSTEGGNVYATG-------GNNEGQLGLGDTEERNTFHVISFFTSEH--KI 142

Query: 163 SQVSRSSGGTSSGT-DGR-------GSGEEGSKR-------RRISLAK----------QT 197
            Q+S  S  +++ T DGR         G+ G K        +++++ K           +
Sbjct: 143 KQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHS 202

Query: 198 AESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSD------------------I 239
           A  +SSG E+ ++    ++L P V    V    RH+ +  D                   
Sbjct: 203 AFVTSSGLESGNS---PISLPPKVTNELVE---RHSFSRYDGNSVCFHNPCLVFAPFLSE 256

Query: 240 GQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPG 299
             V+ +G G  GQLGLG+ +   S P  I  I     +D++                   
Sbjct: 257 NAVYTFGLGQFGQLGLGTFLFETSEPKVIENI-----RDQT------------------- 292

Query: 300 NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD--DELSPNCVSSLLGIQIEGV 357
             +  I+CG  H+A+ITD G + TFG G +G+ G G  +  +   P   S+ L   ++ V
Sbjct: 293 --ISYISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLV 350

Query: 358 AAGLWHTICISS 369
           A G  H +  ++
Sbjct: 351 ACGGCHMVIFAA 362


>gi|354465912|ref|XP_003495420.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Cricetulus griseus]
          Length = 1136

 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 60/171 (35%), Positives = 94/171 (54%), Gaps = 4/171 (2%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           ++CG  H+A++T    L  FG   +GQ G GS      P C+ +L   +++  A G  HT
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCIKALKPEKVKLAACGRNHT 137

Query: 365 ICISSDGDVYAFGGNQFGQLGTGG-DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
           +  +  G VYA GGN  GQLG G  D  +T  ++      +N+  K +S GA  +A + +
Sbjct: 138 LVSTDKGSVYAAGGNNEGQLGLGDTDDRDTFHQIGFFTPKDNI--KQLSAGANTSAALTE 195

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAV 474
           DGK+F WG N  GQ+GL +  +  IP +VT+ G     ++CG++H+  + V
Sbjct: 196 DGKLFMWGDNSEGQIGLKNKSNVCIPHEVTV-GKPISWISCGYYHSAFVTV 245



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 139/298 (46%), Gaps = 45/298 (15%)

Query: 213 CLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLG-----SRIRMVSSPHP 267
           C+  L P  ++   A G  HTL  +D G V+  G   EGQLGLG          +    P
Sbjct: 118 CIKALKPE-KVKLAACGRNHTLVSTDKGSVYAAGGNNEGQLGLGDTDDRDTFHQIGFFTP 176

Query: 268 IPCIES-SYGKDRSAALSRGSV------NSEG------------PGFRVPGNYVKGIACG 308
              I+  S G + SAAL+          NSEG            P     G  +  I+CG
Sbjct: 177 KDNIKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVTVGKPISWISCG 236

Query: 309 GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVS--SLLGI--QIEGVAAGLWHT 364
             HSA +T  G L TFG    G+ G     ++L  N  S   +LGI  ++  VA G  HT
Sbjct: 237 YYHSAFVTVDGELYTFGEPENGKLG---LPNQLLINHRSPQRVLGIPEKVIQVACGGGHT 293

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAET-LPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
           + + +D  VYAFG  QFGQLG G    ET  P++++   +++     +SCG  HTA++ D
Sbjct: 294 VVL-TDKVVYAFGLGQFGQLGLGTFLFETSEPKVIE--RIKDQKISYISCGENHTALMTD 350

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC------VPRNVACGWWHTLLLAVP 475
            G ++ +G  ++G+LGLG     N  +Q     C        + +ACG  H L+ A P
Sbjct: 351 IGLMYTFGDGRHGKLGLG---MENFTNQFFPTLCSNFLRFTVQLIACGGCHMLVFATP 405



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 76/280 (27%), Positives = 132/280 (47%), Gaps = 40/280 (14%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIE------SSYGKDR 279
           ++ G  HT  ++   +++ +G    GQLGLGS+   +S P  I  ++      ++ G++ 
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSK-SAISKPTCIKALKPEKVKLAACGRNH 136

Query: 280 S-AALSRGSV-----NSEGP---------------GFRVPGNYVKGIACGGRHSAVITDA 318
           +  +  +GSV     N+EG                GF  P + +K ++ G   SA +T+ 
Sbjct: 137 TLVSTDKGSVYAAGGNNEGQLGLGDTDDRDTFHQIGFFTPKDNIKQLSAGANTSAALTED 196

Query: 319 GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           G L  +G    GQ G  +  +   P+ V+  +G  I  ++ G +H+  ++ DG++Y FG 
Sbjct: 197 GKLFMWGDNSEGQIGLKNKSNVCIPHEVT--VGKPISWISCGYYHSAFVTVDGELYTFGE 254

Query: 379 NQFGQLGTGGD---QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKY 435
            + G+LG          +  R+L  P  E V    V+CG  HT V+  D  V+ +G  ++
Sbjct: 255 PENGKLGLPNQLLINHRSPQRVLGIP--EKV--IQVACGGGHTVVLT-DKVVYAFGLGQF 309

Query: 436 GQLGLGDVIDRNIPSQVT--IEGCVPRNVACGWWHTLLLA 473
           GQLGLG  +      +V   I+      ++CG  HT L+ 
Sbjct: 310 GQLGLGTFLFETSEPKVIERIKDQKISYISCGENHTALMT 349


>gi|170050907|ref|XP_001861523.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
 gi|167872400|gb|EDS35783.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
          Length = 4784

 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 94/298 (31%), Positives = 130/298 (43%), Gaps = 65/298 (21%)

Query: 212  PCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP 269
            P LV     V I  VA  +GG+H LALS  G+V+ WG G +G+LG G+R           
Sbjct: 4020 PTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNR----------- 4068

Query: 270  CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
                SY  DR   +   S           G  V  IACG  HSA IT  G +LT+G G Y
Sbjct: 4069 ---DSY--DRPKLIEALS-----------GIGVVDIACGSAHSACITSQGHVLTWGKGRY 4112

Query: 330  GQCGQGSTDDEL---------------------------------SPNCVSSLLGIQIEG 356
            G+ G G ++D+L                                 SP  + SL G+ +  
Sbjct: 4113 GRLGHGDSEDQLQPKRCVLRTTIMCGVGVTAIMASLAEEVPMGARSPMKIESLAGLGVIK 4172

Query: 357  VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR 416
            V  G   ++ ++  G VY +G   + +LG G       P+ + A  L+     S++ G+ 
Sbjct: 4173 VECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAA--LQGKKIISIATGSL 4230

Query: 417  HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLA 473
            H    +D G+VF WG N  GQLG G V     P  V +++G     V CG  HTL L+
Sbjct: 4231 HCVACSDSGEVFTWGDNDEGQLGDGTVTAIQRPRLVQSLQGKHIVKVICGSAHTLALS 4288



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 129/310 (41%), Gaps = 84/310 (27%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            V+   V +GG+H +AL+  G+V+ WG G +G+LG G+R+ +       P +  S    R 
Sbjct: 2994 VKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRVTLEK-----PKLLESLRTKR- 3047

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                                 ++ IACG  HSA IT +G L T+G G YG+ G G    +
Sbjct: 3048 ---------------------IRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQ 3086

Query: 341  LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQ--------------- 383
            L P  V++L G ++  VA G     T+C++ +G V+++G   FG+               
Sbjct: 3087 LKPKLVTALQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGGSEGCSVPHQV 3146

Query: 384  -------------------------------------LGTGGDQAETLPRLLDAPSLENV 406
                                                 LG G DQ    P  +    L   
Sbjct: 3147 ERLNGVGVVQIECGAQFSLALTKIGEVWTWGKGDYYRLGHGTDQHVRKPTPIQG--LRGK 3204

Query: 407  HSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACG 465
                V+ GA H   + D G+VF WG N +GQ G G+ +    P+ V  ++G     VACG
Sbjct: 3205 KVIHVAVGALHCLAVTDSGQVFAWGDNDHGQQGSGNTVVNKKPNLVLGLDGVFVNRVACG 3264

Query: 466  WWHTLLLAVP 475
              H++  ++P
Sbjct: 3265 SSHSVAWSLP 3274



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 109/413 (26%), Positives = 177/413 (42%), Gaps = 70/413 (16%)

Query: 71  STDDLGQSYVTSGKH-GEIPEP-FPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECV 128
           +T DL Q+ V    H   + +P  P    ++ V A A  A         +++T GW  C 
Sbjct: 447 ATVDLKQAAVIIISHLDRLAKPHLPAGNYSAKVNAKANSAQ--------KIFTLGWSSCS 498

Query: 129 PSGRVFGDLSTGTGLDKDVFE---RQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEG 185
           P   ++G  S  +     +      + S  T ++ P  QV + +   +S      SG+  
Sbjct: 499 P--EMYGFTSEASNASAQLLAGSVPRYSTATIELPPSLQVRQVACTENSIYIVTTSGQ-- 554

Query: 186 SKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAG--GRHTLALSDIGQVW 243
                 S+    AE+ +         P LV    GV +  +AA   GRH +ALS  G+V+
Sbjct: 555 ----LYSIHSSCAETVA---------PKLVEGLEGVSVIQIAAHCEGRHAMALSSAGEVY 601

Query: 244 GWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVK 303
            WG G  G+LG G                              + + E P        V 
Sbjct: 602 SWGAGEGGRLGHGD-----------------------------TASKEVPTKIALEKQVT 632

Query: 304 GIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA--AGL 361
            I  G  +SA ++  G L T+G G YG+ G G++DD+  P  V +L   ++  VA  +G 
Sbjct: 633 AIYAGASYSAAVSSVGELFTWGRGTYGRLGHGNSDDKFVPTQVQALKAYKVVDVALGSGD 692

Query: 362 WHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLD-APSLENVHSKSVSCGARHTAV 420
            H++ ++  G ++A+G   FG+LG G      LP  ++   S+  ++S     G++ +  
Sbjct: 693 AHSMAVTDGGLLFAWGDGDFGKLGNGSCNGSPLPVQIEGVSSVARIYS-----GSQFSVA 747

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLL 472
           ++ DG ++ WG    G+LG G+    N+P  V  +EG    +VA G  H L L
Sbjct: 748 LSYDGTLYSWGKGHGGRLGHGNSEHSNVPKLVHALEGKKIVDVAVGSAHCLAL 800



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 77/237 (32%), Positives = 113/237 (47%), Gaps = 41/237 (17%)

Query: 242  VWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPG 299
            ++GWG+   GQLG   GSRI+M     P PC                    E      P 
Sbjct: 3946 IFGWGHNHRGQLGGLDGSRIKM-----PTPC--------------------EALSLLRPI 3980

Query: 300  NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA- 358
                 IA G +    +T  G L   G+G  G+ G G TD   +P  V SL  + I+ VA 
Sbjct: 3981 Q----IAGGEQTLYAVTPDGKLYATGYGAGGRLGIGGTDSVSTPTLVESLQHVIIKKVAV 4036

Query: 359  -AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARH 417
             +G  H + +SSDG+V+++G  + G+LG G   +   P+L++A  L  +    ++CG+ H
Sbjct: 4037 NSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRPKLIEA--LSGIGVVDIACGSAH 4094

Query: 418  TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPR-NVACGWWHTLLLA 473
            +A I   G V  WG  +YG+LG GD  D+  P +     CV R  + CG   T ++A
Sbjct: 4095 SACITSQGHVLTWGKGRYGRLGHGDSEDQLQPKR-----CVLRTTIMCGVGVTAIMA 4146



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 98/345 (28%), Positives = 143/345 (41%), Gaps = 58/345 (16%)

Query: 83   GKHGEIPEPFPLPT-EASIVKAAA---GWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLS 138
            G +  +P P  +P     +VK  A   G  H +A+T  G+V++WG  E        G L 
Sbjct: 2975 GHNNNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGED-------GKLG 3027

Query: 139  TGTGLDKDVFERQSSFLTEQVSPRS-QVSRSSGGTSSGTDGR-GSGEEGSKRRRISLAKQ 196
             G  +  +  +   S  T+++   +   S S+  TSSG     G GE G    R+     
Sbjct: 3028 HGNRVTLEKPKLLESLRTKRIRDIACGSSHSAAITSSGELYTWGLGEYG----RLG---- 3079

Query: 197  TAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGR--HTLALSDIGQVWGWGYGGEGQLG 254
                   GD      P LVT   G R+  VA G R   TL L++ G V+ WG G  G+LG
Sbjct: 3080 ------HGDNCTQLKPKLVTALQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLG 3133

Query: 255  LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAV 314
             G      S PH +                           R+ G  V  I CG + S  
Sbjct: 3134 RGGS-EGCSVPHQVE--------------------------RLNGVGVVQIECGAQFSLA 3166

Query: 315  ITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVY 374
            +T  G + T+G G Y + G G+      P  +  L G ++  VA G  H + ++  G V+
Sbjct: 3167 LTKIGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVF 3226

Query: 375  AFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            A+G N  GQ G+G       P L+    L+ V    V+CG+ H+ 
Sbjct: 3227 AWGDNDHGQQGSGNTVVNKKPNLV--LGLDGVFVNRVACGSSHSV 3269



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 81/332 (24%), Positives = 146/332 (43%), Gaps = 34/332 (10%)

Query: 144  DKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSS 203
            D ++  + +SFL  +    ++ S S+  +S+  D + S E  SK     L  +       
Sbjct: 2867 DLEMMLQNASFLATENDSAAEPSYST--SSNYADEQSSNEISSKVLVWGLNDKEQLGGLK 2924

Query: 204  GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
            G +     P   ++   ++   ++ G +    +S  G+++  G G  G+LGLG     V 
Sbjct: 2925 GSK--VKLPTYSSVLSQLKPIHISGGSKSLFIVSQDGKLYACGEGTNGRLGLGHN-NNVP 2981

Query: 264  SPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLT 323
            +P  +P +     K                           +  GG+H+  +T  G + +
Sbjct: 2982 TPRQVPILNQYVVKK------------------------VAVHSGGKHAMALTLDGKVFS 3017

Query: 324  FGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQ 383
            +G G  G+ G G+      P  + SL   +I  +A G  H+  I+S G++Y +G  ++G+
Sbjct: 3018 WGEGEDGKLGHGNRVTLEKPKLLESLRTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3077

Query: 384  LGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR--HTAVIADDGKVFCWGWNKYGQLGLG 441
            LG G +  +  P+L+ A  L+      V+CG+R   T  + ++G VF WG   +G+LG G
Sbjct: 3078 LGHGDNCTQLKPKLVTA--LQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRG 3135

Query: 442  DVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
                 ++P QV  + G     + CG   +L L
Sbjct: 3136 GSEGCSVPHQVERLNGVGVVQIECGAQFSLAL 3167



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 97/348 (27%), Positives = 141/348 (40%), Gaps = 68/348 (19%)

Query: 25   PQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDD--LGQ-SYVT 81
            P++ PIL+  VV+         +     G   AMA++   K+ +WG  +D  LG  + VT
Sbjct: 2983 PRQVPILNQYVVK---------KVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRVT 3033

Query: 82   SGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTG- 140
              K    P+         I   A G +H  A+T  GE+YTWG  E       +G L  G 
Sbjct: 3034 LEK----PKLLESLRTKRIRDIACGSSHSAAITSSGELYTWGLGE-------YGRLGHGD 3082

Query: 141  --TGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGR-GSGEEGSKRRRISLAKQT 197
              T L   +          QV+  S+ +++   T  G     G G+ G   R        
Sbjct: 3083 NCTQLKPKLVTALQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGR-------- 3134

Query: 198  AESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS 257
                  G E  S    +  LN GV +  +  G + +LAL+ IG+VW WG G   +LG G+
Sbjct: 3135 -----GGSEGCSVPHQVERLN-GVGVVQIECGAQFSLALTKIGEVWTWGKGDYYRLGHGT 3188

Query: 258  RIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITD 317
              + V  P PI                         G R  G  V  +A G  H   +TD
Sbjct: 3189 D-QHVRKPTPIQ------------------------GLR--GKKVIHVAVGALHCLAVTD 3221

Query: 318  AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTI 365
            +G +  +G   +GQ G G+T     PN V  L G+ +  VA G  H++
Sbjct: 3222 SGQVFAWGDNDHGQQGSGNTVVNKKPNLVLGLDGVFVNRVACGSSHSV 3269



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 80/297 (26%), Positives = 129/297 (43%), Gaps = 58/297 (19%)

Query: 98  ASIVKAAAGWA--HCVAVTEGGEVYTWGWKECVPSGRV-FGDLSTGTGLDKDVFERQSSF 154
            S+++ AA     H +A++  GEVY+WG  E    GR+  GD ++     K   E+Q + 
Sbjct: 577 VSVIQIAAHCEGRHAMALSSAGEVYSWGAGE---GGRLGHGDTASKEVPTKIALEKQVTA 633

Query: 155 LTEQVSPRSQVSRSSGGTSSGTDGRGS-GEEGSKRRRISLAKQTAESSSSGDENLSAFPC 213
           +    S  + VS S G     T GRG+ G  G                  G+ +    P 
Sbjct: 634 IYAGASYSAAVS-SVGEL--FTWGRGTYGRLG-----------------HGNSDDKFVPT 673

Query: 214 LVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
            V      ++  VA  +G  H++A++D G ++ WG G  G+LG GS      +  P+P  
Sbjct: 674 QVQALKAYKVVDVALGSGDAHSMAVTDGGLLFAWGDGDFGKLGNGS-----CNGSPLP-- 726

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
                           V  EG       + V  I  G + S  ++  G L ++G G  G+
Sbjct: 727 ----------------VQIEGV------SSVARIYSGSQFSVALSYDGTLYSWGKGHGGR 764

Query: 332 CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGG 388
            G G+++    P  V +L G +I  VA G  H + ++S G++Y +G N + Q+   G
Sbjct: 765 LGHGNSEHSNVPKLVHALEGKKIVDVAVGSAHCLALTSSGELYGWGRNDYQQICPSG 821



 Score = 47.4 bits (111), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 85/212 (40%), Gaps = 40/212 (18%)

Query: 52  GGCGFAMAISDSRKLITWGSTDDLGQSYVTSGK--HGEIPEPFPLPTEASIVKA------ 103
            G  ++ A+S   +L TWG          T G+  HG   + F +PT+   +KA      
Sbjct: 636 AGASYSAAVSSVGELFTWGRG--------TYGRLGHGNSDDKF-VPTQVQALKAYKVVDV 686

Query: 104 --AAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSP 161
              +G AH +AVT+GG ++ WG  +       FG L  G+           S L  Q+  
Sbjct: 687 ALGSGDAHSMAVTDGGLLFAWGDGD-------FGKLGNGSC--------NGSPLPVQIEG 731

Query: 162 RSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGV 221
            S V+R   G+         G         S  K        G+   S  P LV    G 
Sbjct: 732 VSSVARIYSGSQFSVALSYDGT------LYSWGKGHGGRLGHGNSEHSNVPKLVHALEGK 785

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQL 253
           +I  VA G  H LAL+  G+++GWG     Q+
Sbjct: 786 KIVDVAVGSAHCLALTSSGELYGWGRNDYQQI 817



 Score = 42.7 bits (99), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 8/84 (9%)

Query: 53  GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
           G  F++A+S    L +WG      LG     + +H  +P+         IV  A G AHC
Sbjct: 741 GSQFSVALSYDGTLYSWGKGHGGRLGHG---NSEHSNVPKLVHALEGKKIVDVAVGSAHC 797

Query: 111 VAVTEGGEVYTWG---WKECVPSG 131
           +A+T  GE+Y WG   +++  PSG
Sbjct: 798 LALTSSGELYGWGRNDYQQICPSG 821


>gi|156740286|ref|YP_001430415.1| regulator of chromosome condensation RCC1 [Roseiflexus castenholzii
           DSM 13941]
 gi|156231614|gb|ABU56397.1| regulator of chromosome condensation RCC1 [Roseiflexus castenholzii
           DSM 13941]
          Length = 792

 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 124/276 (44%), Gaps = 27/276 (9%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG---------------LGSRIRMVSS 264
           G  +  +AAGG HT AL   G VW WG    GQLG               L S +  +++
Sbjct: 219 GSGVTAIAAGGSHTCALMSSGGVWCWGDNWSGQLGDGTTTDRSTPVAVSGLASGVTAIAA 278

Query: 265 PHPIPCIESS------YGKDRSAALSRGSVNSEGPGFRVPG--NYVKGIACGGRHSAVIT 316
                C  +S      +G + S  L  G+  +      V G  + V  IA G  H+  +T
Sbjct: 279 GGFHTCARTSSGGVMCWGANWSGQLGDGTTTARSTPVAVSGLASGVTAIAAGDSHTCALT 338

Query: 317 DAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAF 376
            +G +  +G+  +GQ G G+T D  +P  VS L G  +  +AAG +HT  + S G V  +
Sbjct: 339 SSGGVWCWGYNFFGQLGDGTTTDRSTPVAVSGL-GSGVTAIAAGDFHTCALMSSGGVRCW 397

Query: 377 GGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYG 436
           G N+ GQLG G     + P  +    +  V   +++ G  HT      G V CWG N  G
Sbjct: 398 GRNKDGQLGDGTTTTRSTPVAVSGL-VSGV--TAIAAGDDHTCARTSSGGVMCWGDNWSG 454

Query: 437 QLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           QLG G   DR+ P  V+  G     +A G  HT  L
Sbjct: 455 QLGDGTTTDRSTPVAVSGLGSGVTAIAAGGSHTCAL 490



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 86/273 (31%), Positives = 121/273 (44%), Gaps = 27/273 (9%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLG---------------LGSRIRMVSSPHP 267
           +  +AAG  HT AL   G V  WG    GQLG               L S +  +++   
Sbjct: 120 VTAIAAGYAHTCALMSSGGVMCWGDNWSGQLGDGTTTDRSTPVAVSGLASGVTAIAAGDD 179

Query: 268 IPCIESS------YGKDRSAALSRGSVNSEGPGFRVPG--NYVKGIACGGRHSAVITDAG 319
             C  +S      +G + S  L  G+         V G  + V  IA GG H+  +  +G
Sbjct: 180 HTCARTSSGGVMCWGDNWSGQLGDGTTTDRSTPVAVSGLGSGVTAIAAGGSHTCALMSSG 239

Query: 320 ALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN 379
            +  +G    GQ G G+T D  +P  VS L    +  +AAG +HT   +S G V  +G N
Sbjct: 240 GVWCWGDNWSGQLGDGTTTDRSTPVAVSGLAS-GVTAIAAGGFHTCARTSSGGVMCWGAN 298

Query: 380 QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG 439
             GQLG G   A + P    A S       +++ G  HT  +   G V+CWG+N +GQLG
Sbjct: 299 WSGQLGDGTTTARSTPV---AVSGLASGVTAIAAGDSHTCALTSSGGVWCWGYNFFGQLG 355

Query: 440 LGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
            G   DR+ P  V+  G     +A G +HT  L
Sbjct: 356 DGTTTDRSTPVAVSGLGSGVTAIAAGDFHTCAL 388



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 77/235 (32%), Positives = 107/235 (45%), Gaps = 34/235 (14%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G  +  +AAGG HT AL   G VW WG    GQLG G+                    DR
Sbjct: 474 GSGVTAIAAGGSHTCALMSSGGVWCWGRNSSGQLGDGTT------------------TDR 515

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDD 339
              ++   + SE          V  IA GG H+  +T +G ++ +G    GQ G G+T  
Sbjct: 516 GTPVAVSGLPSE----------VTAIASGGVHTCALTSSGGVMCWGANWSGQLGDGTTTA 565

Query: 340 ELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLD 399
             +P  VS L    +  +AAG  HT  ++S G V+ +G N  GQLG G   A + P  + 
Sbjct: 566 RSTPVAVSGLPS-GVMAIAAGDLHTCALTSSGGVWCWGANSSGQLGDGTTTARSTPVAVS 624

Query: 400 A-PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT 453
             PS       +++ G+ HT  +   G V+CWG N  GQLG G   D + P  V+
Sbjct: 625 GLPS----GVTAIAAGSFHTCALTSSGGVWCWGANWSGQLGDGSYTDSSTPVAVS 675



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 87/280 (31%), Positives = 120/280 (42%), Gaps = 27/280 (9%)

Query: 216 TLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQL---------------GLGSRIR 260
           + +P   +  +AAGG HT AL+  G V  WG  G GQL               GL S + 
Sbjct: 62  SFSPLQGVTAIAAGGAHTCALTSSGGVMCWGRNGFGQLGDGTTTDRSTPVAVSGLTSGVT 121

Query: 261 MVSSPHPIPCIESS------YGKDRSAALSRGSVNSEGPGFRVPG--NYVKGIACGGRHS 312
            +++ +   C   S      +G + S  L  G+         V G  + V  IA G  H+
Sbjct: 122 AIAAGYAHTCALMSSGGVMCWGDNWSGQLGDGTTTDRSTPVAVSGLASGVTAIAAGDDHT 181

Query: 313 AVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGD 372
              T +G ++ +G    GQ G G+T D  +P  VS  LG  +  +AAG  HT  + S G 
Sbjct: 182 CARTSSGGVMCWGDNWSGQLGDGTTTDRSTPVAVSG-LGSGVTAIAAGGSHTCALMSSGG 240

Query: 373 VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGW 432
           V+ +G N  GQLG G     + P    A S       +++ G  HT      G V CWG 
Sbjct: 241 VWCWGDNWSGQLGDGTTTDRSTPV---AVSGLASGVTAIAAGGFHTCARTSSGGVMCWGA 297

Query: 433 NKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           N  GQLG G    R+ P  V+        +A G  HT  L
Sbjct: 298 NWSGQLGDGTTTARSTPVAVSGLASGVTAIAAGDSHTCAL 337



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 109/248 (43%), Gaps = 27/248 (10%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLG---------------SRIRMVSSPH 266
            +  +A+GG HT AL+  G V  WG    GQLG G               S +  +++  
Sbjct: 527 EVTAIASGGVHTCALTSSGGVMCWGANWSGQLGDGTTTARSTPVAVSGLPSGVMAIAAGD 586

Query: 267 PIPCIESS------YGKDRSAALSRGSVNSEGPGFRVPG--NYVKGIACGGRHSAVITDA 318
              C  +S      +G + S  L  G+  +      V G  + V  IA G  H+  +T +
Sbjct: 587 LHTCALTSSGGVWCWGANSSGQLGDGTTTARSTPVAVSGLPSGVTAIAAGSFHTCALTSS 646

Query: 319 GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           G +  +G    GQ G GS  D  +P  VS L    +  +AAG +HT   +  G V+ +  
Sbjct: 647 GGVWCWGANWSGQLGDGSYTDSSTPVAVSGLPS-GVTAIAAGRFHTCARTGSGGVWCWAS 705

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N++GQLG G     + P  +    +  V   +++ G  HT      G V CWG N  GQL
Sbjct: 706 NRYGQLGDGSYTDSSTPVAVSGL-VSGV--TAIAAGVVHTCARTSSGGVMCWGANSSGQL 762

Query: 439 GLGDVIDR 446
           G G ++ R
Sbjct: 763 GDGRLLYR 770


>gi|383851572|ref|XP_003701306.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Megachile rotundata]
          Length = 864

 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 80/264 (30%), Positives = 121/264 (45%), Gaps = 48/264 (18%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G +I  +AAG  H+LAL   G V+ WG   EGQLGL     +V+ P  +   E       
Sbjct: 215 GSKILQLAAGSHHSLALISDGGVFAWGSNLEGQLGLPDVSGLVNKPTKVHIPEP------ 268

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDD 339
                                 VK I+ G  HSA +T++G +   G    G+ G      
Sbjct: 269 ----------------------VKQISAGYYHSAFLTESGLVYICGESESGKLG------ 300

Query: 340 ELSPNCVSSLLGIQIE------GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAET 393
            +  N  + +   Q++       VA G  HT+ ++ +G++Y  G N  GQLG G +  E 
Sbjct: 301 -IDVNFSTQITPKQMQLPSPAVHVACGGHHTVVLAENGNIYCTGSNSNGQLGLGTNVTEL 359

Query: 394 -LPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
             P+LL    L+N     +SCG  HTA++ + GK+F  G  ++G+LGL +  + N   ++
Sbjct: 360 HTPKLLSRGMLQNETISRISCGESHTAIVTESGKLFTCGDGRHGKLGLEE--NENNVHEL 417

Query: 453 TI----EGCVPRNVACGWWHTLLL 472
           T     +      VACG  HT+LL
Sbjct: 418 TFVQRYKELFVSKVACGGCHTILL 441



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/183 (34%), Positives = 93/183 (50%), Gaps = 7/183 (3%)

Query: 295 FRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQI 354
           F +  + V  I CG  HSAVI  +G L  FG   +GQ G G  +    P+CV  L   ++
Sbjct: 102 FFIRKDPVVSITCGDEHSAVICQSGRLFVFGSNDWGQLGLGHRNHISKPSCVKVLKPEKV 161

Query: 355 EGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG----GDQAETLPRLLDAPSLENVHSKS 410
             VA G  HT+  +    ++A G +Q GQLG G    GD + + P L+    L       
Sbjct: 162 THVACGRAHTLISTGAQKIFACGSDQEGQLGRGTSAIGDSSSS-PVLVYDAGLAGSKILQ 220

Query: 411 VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR-NIPSQVTIEGCVPRNVACGWWHT 469
           ++ G+ H+  +  DG VF WG N  GQLGL DV    N P++V I   V + ++ G++H+
Sbjct: 221 LAAGSHHSLALISDGGVFAWGSNLEGQLGLPDVSGLVNKPTKVHIPEPV-KQISAGYYHS 279

Query: 470 LLL 472
             L
Sbjct: 280 AFL 282



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 78/267 (29%), Positives = 124/267 (46%), Gaps = 57/267 (21%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           + ++  G  H+  +   G+++ +G    GQLGLG R   +S P  +  ++          
Sbjct: 109 VVSITCGDEHSAVICQSGRLFVFGSNDWGQLGLGHR-NHISKPSCVKVLKPEK------- 160

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST---DD 339
                              V  +ACG  H+ + T A  +   G    GQ G+G++   D 
Sbjct: 161 -------------------VTHVACGRAHTLISTGAQKIFACGSDQEGQLGRGTSAIGDS 201

Query: 340 ELSPNCV--SSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPR- 396
             SP  V  + L G +I  +AAG  H++ + SDG V+A+G N  GQLG        LP  
Sbjct: 202 SSSPVLVYDAGLAGSKILQLAAGSHHSLALISDGGVFAWGSNLEGQLG--------LPDV 253

Query: 397 --LLDAPSLENVH----SKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
             L++ P+   VH     K +S G  H+A + + G V+  G ++ G+LG    ID N  +
Sbjct: 254 SGLVNKPT--KVHIPEPVKQISAGYYHSAFLTESGLVYICGESESGKLG----IDVNFST 307

Query: 451 QVTIEGC-VPR---NVACGWWHTLLLA 473
           Q+T +   +P    +VACG  HT++LA
Sbjct: 308 QITPKQMQLPSPAVHVACGGHHTVVLA 334


>gi|348677379|gb|EGZ17196.1| hypothetical protein PHYSODRAFT_500159 [Phytophthora sojae]
          Length = 240

 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 113/233 (48%), Gaps = 30/233 (12%)

Query: 214 LVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES 273
           +V L P +++A++A G +H+L  +  GQ + WG G  GQLGLG+ I    SP    CI+ 
Sbjct: 4   IVQLPPRLQVASIACGWKHSLLATADGQAFSWGSGRHGQLGLGNDILKTESP---KCIDG 60

Query: 274 SYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCG 333
                                  V G  ++ + CG  HS   + +G +LT G   +GQ G
Sbjct: 61  -----------------------VNGMAIRDVFCGWEHSVFRSSSGEVLTCGNNRHGQLG 97

Query: 334 QGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAET 393
           Q         +     LG++   V  G    +C++ DG++ A+G    GQLG  G +  +
Sbjct: 98  QVVALPIRVADPRHKHLGLRTVQVGCGWHFVLCLTEDGNLVAWGKGSHGQLGLRGFENAS 157

Query: 394 LPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR 446
            P+L+         ++ ++CG+ H+ V+  DG+++  GW ++G LG GD  +R
Sbjct: 158 EPQLVTFAHT----ARQIACGSEHSMVVTTDGELYTCGWGEHGNLGHGDKTNR 206



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 60/180 (33%), Positives = 90/180 (50%), Gaps = 12/180 (6%)

Query: 298 PGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL---SPNCVSSLLGIQI 354
           P   V  IACG +HS + T  G   ++G G +GQ G G  +D L   SP C+  + G+ I
Sbjct: 9   PRLQVASIACGWKHSLLATADGQAFSWGSGRHGQLGLG--NDILKTESPKCIDGVNGMAI 66

Query: 355 EGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVS-- 412
             V  G  H++  SS G+V   G N+ GQLG    Q   LP  +  P  +++  ++V   
Sbjct: 67  RDVFCGWEHSVFRSSSGEVLTCGNNRHGQLG----QVVALPIRVADPRHKHLGLRTVQVG 122

Query: 413 CGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           CG      + +DG +  WG   +GQLGL    + + P  VT      R +ACG  H++++
Sbjct: 123 CGWHFVLCLTEDGNLVAWGKGSHGQLGLRGFENASEPQLVTFAH-TARQIACGSEHSMVV 181



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 107/289 (37%), Gaps = 69/289 (23%)

Query: 94  LPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSS 153
           LP    +   A GW H +  T  G+ ++WG      SGR  G L    GL  D+ + +S 
Sbjct: 7   LPPRLQVASIACGWKHSLLATADGQAFSWG------SGR-HGQL----GLGNDILKTESP 55

Query: 154 FLTEQVSPRS----------QVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSS 203
              + V+  +           V RSS G        G+   G   + ++L  + A+    
Sbjct: 56  KCIDGVNGMAIRDVFCGWEHSVFRSSSGEVLTC---GNNRHGQLGQVVALPIRVADPRHK 112

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
                         + G+R   V  G    L L++ G +  WG G  GQLGL        
Sbjct: 113 --------------HLGLRTVQVGCGWHFVLCLTEDGNLVAWGKGSHGQLGL-------- 150

Query: 264 SPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLT 323
                                RG  N+  P      +  + IACG  HS V+T  G L T
Sbjct: 151 ---------------------RGFENASEPQLVTFAHTARQIACGSEHSMVVTTDGELYT 189

Query: 324 FGWGLYGQCGQGSTDDELSPNCVSSLLGI--QIEGVAAGLWHTICISSD 370
            GWG +G  G G   +  S   V   +    ++  VAAG   +I ++ D
Sbjct: 190 CGWGEHGNLGHGDKTNRPSLEKVDFFVDASQEVLKVAAGGAVSIAVTRD 238


>gi|330837467|ref|YP_004412108.1| chromosome condensation regulator RCC1 [Sphaerochaeta coccoides DSM
           17374]
 gi|329749370|gb|AEC02726.1| regulator of chromosome condensation RCC1 [Sphaerochaeta coccoides
           DSM 17374]
          Length = 781

 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 82/283 (28%), Positives = 133/283 (46%), Gaps = 36/283 (12%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES------- 273
           V++ +V+AGG HTL L   G +W  G    GQLG+G+   + S   P+  +         
Sbjct: 418 VKVKSVSAGGFHTLILKMDGTLWATGNNEYGQLGVGTSGTVNSKSTPVQVMTDVAAVSAG 477

Query: 274 --------------SYGKDRSAALSRGSVNSEGPGFRVP--GNYVKGIACGGRHSAVITD 317
                         + G+++   L  G   +     +V   G+ V  ++ G  ++ ++  
Sbjct: 478 WSHTMILKNDGTLWATGRNKVGQLGVGDNTNRSTPVQVSSMGSDVAAVSTGESYTMIVKK 537

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGI----QIEGVAAGLWHTICISSDGDV 373
            G L   G    GQ G G+TDD   P  V  L G+     +E V AG +HT+ +  +G +
Sbjct: 538 DGTLWATGQNTAGQLGDGTTDDRNKPVQVKGLNGVGFMTDVEDVFAGGFHTMILKKNGTL 597

Query: 374 YAFGGNQFGQLGTGGDQAETLPRLLDAPS----LENVHSKSVSCGARHTAVIADDGKVFC 429
           +A G N FGQL  G     T P  +   S    + +V   +VS G  HT ++  DG ++ 
Sbjct: 598 WATGFNYFGQLCDGTTTIRTTPVQVQDSSGVGFMTDV--ATVSAGWAHTMILKKDGTLWA 655

Query: 430 WGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
            G N+ GQLG+ D I+R+ P+QV+       +V+ G  +T++L
Sbjct: 656 IGKNEQGQLGVSDKINRSTPAQVSSNVA---SVSAGESYTMIL 695



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 86/303 (28%), Positives = 137/303 (45%), Gaps = 43/303 (14%)

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG------- 254
           +SG  N  + P  V  +    +A V+AG  HT+ L + G +W  G    GQLG       
Sbjct: 454 TSGTVNSKSTPVQVMTD----VAAVSAGWSHTMILKNDGTLWATGRNKVGQLGVGDNTNR 509

Query: 255 --------LGSRIRMVSSPHPIPCIES------SYGKDRSAALSRGSVNSEGPGFRVPG- 299
                   +GS +  VS+      I        + G++ +  L  G+ +      +V G 
Sbjct: 510 STPVQVSSMGSDVAAVSTGESYTMIVKKDGTLWATGQNTAGQLGDGTTDDRNKPVQVKGL 569

Query: 300 ------NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGI- 352
                   V+ +  GG H+ ++   G L   G+  +GQ   G+T    +P  V    G+ 
Sbjct: 570 NGVGFMTDVEDVFAGGFHTMILKKNGTLWATGFNYFGQLCDGTTTIRTTPVQVQDSSGVG 629

Query: 353 ---QIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSK 409
               +  V+AG  HT+ +  DG ++A G N+ GQLG     ++ + R   A    NV   
Sbjct: 630 FMTDVATVSAGWAHTMILKKDGTLWAIGKNEQGQLGV----SDKINRSTPAQVSSNV--A 683

Query: 410 SVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHT 469
           SVS G  +T ++  DG ++  G N  G+LG+GD  DR+ P QV+  G     V+ G +HT
Sbjct: 684 SVSAGESYTMILKKDGTLWATGSNDSGRLGVGDNNDRSSPMQVSSMGSDVAAVSAG-FHT 742

Query: 470 LLL 472
           ++L
Sbjct: 743 MIL 745



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 100/380 (26%), Positives = 152/380 (40%), Gaps = 62/380 (16%)

Query: 81  TSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTG 140
           TSG       P  + T+ + V  +AGW+H + +   G ++  G  +        G L  G
Sbjct: 454 TSGTVNSKSTPVQVMTDVAAV--SAGWSHTMILKNDGTLWATGRNKV-------GQLGVG 504

Query: 141 TGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAES 200
              ++    + SS         S V+  S G S     +  G         +  + TA  
Sbjct: 505 DNTNRSTPVQVSSM-------GSDVAAVSTGESYTMIVKKDGT------LWATGQNTAGQ 551

Query: 201 SSSGDENLSAFPCLVTLNPGVRIAT----VAAGGRHTLALSDIGQVWGWGYGGEGQLGLG 256
              G  +    P  V    GV   T    V AGG HT+ L   G +W  G+   GQL  G
Sbjct: 552 LGDGTTDDRNKPVQVKGLNGVGFMTDVEDVFAGGFHTMILKKNGTLWATGFNYFGQLCDG 611

Query: 257 -SRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVI 315
            + IR      P+   +SS                 G GF      V  ++ G  H+ ++
Sbjct: 612 TTTIRTT----PVQVQDSS-----------------GVGFMTD---VATVSAGWAHTMIL 647

Query: 316 TDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYA 375
              G L   G    GQ G     +  +P  VSS     +  V+AG  +T+ +  DG ++A
Sbjct: 648 KKDGTLWAIGKNEQGQLGVSDKINRSTPAQVSS----NVASVSAGESYTMILKKDGTLWA 703

Query: 376 FGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKY 435
            G N  G+LG G +   + P  + +   +     +VS G  HT ++  +G ++  G+N  
Sbjct: 704 TGSNDSGRLGVGDNNDRSSPMQVSSMGSD---VAAVSAG-FHTMILKKNGTLWATGYNFL 759

Query: 436 GQLGLGDV---IDRNIPSQV 452
           GQLGLGD     DR+ P QV
Sbjct: 760 GQLGLGDSGSGTDRSTPEQV 779


>gi|296196030|ref|XP_002745681.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Callithrix
           jacchus]
          Length = 1006

 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 118/253 (46%), Gaps = 30/253 (11%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++   V+ G  H+LA+   G+V+ WG G EGQLG+G    +  +P  I  +         
Sbjct: 75  LKFNLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEINFTPKKITTL--------- 125

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DD 339
                             G  +  ++CG  HS  ++    + ++G   +GQ G G     
Sbjct: 126 -----------------TGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKELSS 168

Query: 340 ELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLP-RLL 398
           + SP  V SL GI +  VAAG  H+  +S  G  + +G N  GQL   G   +    + L
Sbjct: 169 QASPQRVRSLEGIPVAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPL 228

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGC 457
              +L+N+    +SCG  HTAV++ DGKVF +G N  GQLG      +  P  V  I+G 
Sbjct: 229 SIGALKNLGVIYISCGDEHTAVLSQDGKVFTFGDNSSGQLGYNPTPKKRGPQIVERIDGL 288

Query: 458 VPRNVACGWWHTL 470
           V + + CG  HT+
Sbjct: 289 VSQ-IDCGGDHTI 300



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 104/229 (45%), Gaps = 43/229 (18%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P  +T   G++I  V+ G  H+LALS   QV+ WG    GQLGLG  +   +SP  +  +
Sbjct: 119 PKKITTLTGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKELSSQASPQRVRSL 178

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWG---- 327
           E                          G  V  +A GG HS  ++  G   +FGWG    
Sbjct: 179 E--------------------------GIPVAQVAAGGAHSFALSLCGT--SFGWGSNSA 210

Query: 328 ----LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQ 383
               L G+  Q  ++  LS   + +L  + +  ++ G  HT  +S DG V+ FG N  GQ
Sbjct: 211 GQLALSGRNVQVQSNKPLS---IGALKNLGVIYISCGDEHTAVLSQDGKVFTFGDNSSGQ 267

Query: 384 LGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           LG      +  P++++   ++ + S+ + CG  HT A +   G+V  +G
Sbjct: 268 LGYNPTPKKRGPQIVE--RIDGLVSQ-IDCGGDHTIAYVHTTGQVVSFG 313


>gi|226507778|ref|NP_001140994.1| uncharacterized protein LOC100273073 [Zea mays]
 gi|194702086|gb|ACF85127.1| unknown [Zea mays]
 gi|413922319|gb|AFW62251.1| putative regulator of chromosome condensation (RCC1) family protein
           isoform 1 [Zea mays]
 gi|413922320|gb|AFW62252.1| putative regulator of chromosome condensation (RCC1) family protein
           isoform 2 [Zea mays]
          Length = 389

 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 105/425 (24%), Positives = 178/425 (41%), Gaps = 69/425 (16%)

Query: 66  LITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWK 125
           ++ WGS +D GQ  +   +  + P         ++    AG  + +A+ + G ++TWGW 
Sbjct: 10  VLAWGSGED-GQLGMGGNEEKDWPHFVEALGPYAVTAVVAGSRNSLAICDDGRLFTWGWN 68

Query: 126 ECVPSGRVFGDLSTGT-GLDKDVFERQSSFLTEQVSPRSQVSRSSGG---TSSGTDGRGS 181
           +             GT G   +     S    + ++    V  + GG    +    GR  
Sbjct: 69  Q------------RGTLGHPPETKTESSPGPVDALAGFKIVQAAIGGWHCLAVDDKGRAY 116

Query: 182 GEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQ 241
              G++  +     +  E  +         P    L   +++  VAAGG H++ L+  G 
Sbjct: 117 AWGGNEYGQCGEEPERKEDGTRALRRDIPIPQRCALK--LKVRQVAAGGTHSVVLTQEGH 174

Query: 242 VWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNY 301
           VW WG     Q      I+ +S+P  +  +E                             
Sbjct: 175 VWTWG-----QPWPPGDIKQISTPVRVQGLEK---------------------------- 201

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ IA G  H+  +T+   L  +G   YGQ G G T     P  V  L  + +  +AAG 
Sbjct: 202 VRVIAVGAFHNLALTEDVILWAWGNNEYGQLGTGDTQPRSQPIRVEGLSDLSLVDIAAGG 261

Query: 362 WHTICISSDGDVYAFGGNQFGQLGTGGDQ-AETLPRLLDAPSLENVHSKSVSCGARHTAV 420
           WH+  ++ DG+VYA+G  + G+LG G D+ +  +P  ++  + E++    VSCG  H+  
Sbjct: 262 WHSTALTIDGEVYAWGRGEHGRLGFGDDKSSHMVPLKVELLAGEDI--VQVSCGGTHSVA 319

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVP------------RNVACGWWH 468
           +A DG++F +G   +G+LG G  +    P ++ I   +P            + VACG  H
Sbjct: 320 LARDGRMFSYGRGDHGRLGYGRKVTTGHPMELPIN--LPPLSSSRDGRWQAKYVACGGRH 377

Query: 469 TLLLA 473
           TL +A
Sbjct: 378 TLAIA 382



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 106/381 (27%), Positives = 151/381 (39%), Gaps = 64/381 (16%)

Query: 57  AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEG 116
           ++AI D  +L TWG        +    K    P P        IV+AA G  HC+AV + 
Sbjct: 53  SLAICDDGRLFTWGWNQRGTLGHPPETKTESSPGPVDALAGFKIVQAAIGGWHCLAVDDK 112

Query: 117 GEVYTWGWKECVPSGRVFGDLSTGT-GLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSG 175
           G  Y WG  E    G        GT  L +D+   Q   L  +V    QV+  +GGT S 
Sbjct: 113 GRAYAWGGNEYGQCGEEPERKEDGTRALRRDIPIPQRCALKLKVR---QVA--AGGTHS- 166

Query: 176 TDGRGSGEEGSKRRRISLAKQT-----AESSSSGDENLSAFPCLVTLNPGVRIATVAAGG 230
                          + L ++       +    GD    + P  V     VR+  +A G 
Sbjct: 167 ---------------VVLTQEGHVWTWGQPWPPGDIKQISTPVRVQGLEKVRV--IAVGA 209

Query: 231 RHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNS 290
            H LAL++   +W WG    GQLG G      + P   P         R   LS  S+  
Sbjct: 210 FHNLALTEDVILWAWGNNEYGQLGTGD-----TQPRSQPI--------RVEGLSDLSLVD 256

Query: 291 EGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGS-TDDELSPNCVSSL 349
                         IA GG HS  +T  G +  +G G +G+ G G      + P  V  L
Sbjct: 257 --------------IAAGGWHSTALTIDGEVYAWGRGEHGRLGFGDDKSSHMVPLKVELL 302

Query: 350 LGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL--DAPSLENV- 406
            G  I  V+ G  H++ ++ DG ++++G    G+LG G       P  L  + P L +  
Sbjct: 303 AGEDIVQVSCGGTHSVALARDGRMFSYGRGDHGRLGYGRKVTTGHPMELPINLPPLSSSR 362

Query: 407 ----HSKSVSCGARHTAVIAD 423
                +K V+CG RHT  IA+
Sbjct: 363 DGRWQAKYVACGGRHTLAIAE 383



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 78/165 (47%), Gaps = 12/165 (7%)

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
           A A+L +G G  GQ G G  +++  P+ V +L    +  V AG  +++ I  DG ++ +G
Sbjct: 7   ATAVLAWGSGEDGQLGMGGNEEKDWPHFVEALGPYAVTAVVAGSRNSLAICDDGRLFTWG 66

Query: 378 GNQFGQLGTGGD-QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYG 436
            NQ G LG   + + E+ P  +DA  L        + G  H   + D G+ + WG N+YG
Sbjct: 67  WNQRGTLGHPPETKTESSPGPVDA--LAGFKIVQAAIGGWHCLAVDDKGRAYAWGGNEYG 124

Query: 437 QLGL--------GDVIDRNIP-SQVTIEGCVPRNVACGWWHTLLL 472
           Q G            + R+IP  Q        R VA G  H+++L
Sbjct: 125 QCGEEPERKEDGTRALRRDIPIPQRCALKLKVRQVAAGGTHSVVL 169



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 118/298 (39%), Gaps = 62/298 (20%)

Query: 27  RSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHG 86
           R  I  P    L L V    R V  GG   ++ ++    + TWG            G   
Sbjct: 141 RRDIPIPQRCALKLKV----RQVAAGGT-HSVVLTQEGHVWTWGQP-------WPPGDIK 188

Query: 87  EIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKD 146
           +I  P  +     +   A G  H +A+TE   ++ WG  E       +G L TG     D
Sbjct: 189 QISTPVRVQGLEKVRVIAVGAFHNLALTEDVILWAWGNNE-------YGQLGTG-----D 236

Query: 147 VFERQSSFLTEQVSPRSQVSRSSGG---TSSGTDGR----GSGEEGSKRRRISLAKQTAE 199
              R      E +S  S V  ++GG   T+   DG     G GE G    R+        
Sbjct: 237 TQPRSQPIRVEGLSDLSLVDIAAGGWHSTALTIDGEVYAWGRGEHG----RLGFGD---- 288

Query: 200 SSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
                D++    P  V L  G  I  V+ GG H++AL+  G+++ +G G  G+LG G   
Sbjct: 289 -----DKSSHMVPLKVELLAGEDIVQVSCGGTHSVALARDGRMFSYGRGDHGRLGYG--- 340

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITD 317
           R V++ HP+         +    L   S + +G   R    YV   ACGGRH+  I +
Sbjct: 341 RKVTTGHPM---------ELPINLPPLSSSRDG---RWQAKYV---ACGGRHTLAIAE 383


>gi|299116182|emb|CBN74531.1| similar to retinitis pigmentosa GTPase regulator [Ectocarpus
           siliculosus]
          Length = 983

 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 139/318 (43%), Gaps = 41/318 (12%)

Query: 192 SLAKQTAESS--SSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGY-- 247
           +LA+Q+ E    +S  E   A P    +  G   A  AAG  H++  +  G+++ WG   
Sbjct: 19  TLAQQSKEPRICASVQETPKAVPLDRFVKKGDSPAFAAAGANHSILRTSEGKLFRWGVED 78

Query: 248 GGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSV-------------NSEGPG 294
           G       G     V +  P+PCIE   G+  + AL +G               + +   
Sbjct: 79  GDVHPFPTG-----VCTQIPLPCIEVCCGRKHTVALMKGGFVMSWGTGYFGQLGHGDNAS 133

Query: 295 FRVP-----------GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
           +R P           G  V  +ACGG HSAV TDAG + T+G+  YGQCG GS D+ +  
Sbjct: 134 YRHPRLLRRLDPQRLGERVVQVACGGYHSAVATDAGRVFTWGFNRYGQCGNGSKDNTVPE 193

Query: 344 NCVSSLLGI------QIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
             +  L  +      ++  V  G  H+  ++  G +Y +G   FG+LG   D  +T+   
Sbjct: 194 PSLVDLSRVTPGAVGEVPKVLCGRHHSALVTRGGALYTWGACSFGKLGL-QDAEKTVCIP 252

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC 457
            +     +      + G  H   ++   +VF WG+   GQ G G ++   +P +V+    
Sbjct: 253 QEVTFFSDKPLVQAAAGDFHMVALSRKREVFSWGYGAEGQGGHGSLLHMRMPRRVSSLQE 312

Query: 458 VP-RNVACGWWHTLLLAV 474
           VP   V CG W ++ + V
Sbjct: 313 VPVAQVVCGPWWSMAITV 330



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 120/289 (41%), Gaps = 52/289 (17%)

Query: 214 LVTLNP---GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPC 270
           L  L+P   G R+  VA GG H+   +D G+V+ WG+   GQ G GS+   V  P  +  
Sbjct: 140 LRRLDPQRLGERVVQVACGGYHSAVATDAGRVFTWGFNRYGQCGNGSKDNTVPEPSLV-- 197

Query: 271 IESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
                       LSR +  + G         V  + CG  HSA++T  GAL T+G   +G
Sbjct: 198 -----------DLSRVTPGAVG--------EVPKVLCGRHHSALVTRGGALYTWGACSFG 238

Query: 331 QCG-QGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD 389
           + G Q +      P  V+      +   AAG +H + +S   +V+++G    GQ G G  
Sbjct: 239 KLGLQDAEKTVCIPQEVTFFSDKPLVQAAAGDFHMVALSRKREVFSWGYGAEGQGGHGSL 298

Query: 390 QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL--------- 440
               +PR +   SL+ V    V CG   +  I  DG  + WG    G  GL         
Sbjct: 299 LHMRMPRRVS--SLQEVPVAQVVCGPWWSMAITVDGYCYAWGSADGGWTGLTRPPGLRVV 356

Query: 441 --GDVIDRNIPSQ---VTIEGCVPR-----------NVACGWWHTLLLA 473
             G   DR + +Q    T    VP             V CG  HTL++A
Sbjct: 357 DPGPSADRAVETQSFDSTHNVHVPALVYSLAPYKVLQVGCGGGHTLVVA 405


>gi|326674002|ref|XP_001334658.4| PREDICTED: RCC1 and BTB domain-containing protein 2 [Danio rerio]
          Length = 527

 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 76/233 (32%), Positives = 113/233 (48%), Gaps = 34/233 (14%)

Query: 203 SGDENLSAFPCLVTLN-PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +G  N    P LV+ N  G R+  V+ G  HT+AL+  G+V+ WGY   GQ+G GS    
Sbjct: 109 NGTTNHGLTPALVSTNLIGKRVTEVSCGSHHTIALTTDGEVYAWGYNNSGQVGSGS---- 164

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
            ++  P P   SS  +++                      V  IACG   S  + D G  
Sbjct: 165 -TANQPTPRRVSSCLQNK---------------------VVVNIACGQLCSMAVLDNGE- 201

Query: 322 LTFGWGLY--GQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN 379
            T+GWG    GQ G G+  ++ +P  +++L GI I  VA G  HT+ ++ +G VY++G N
Sbjct: 202 -TYGWGYNCNGQLGLGNNGNQQTPCRIAALQGINIIQVACGYAHTLALTDEGFVYSWGAN 260

Query: 380 QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
            +GQLGTG    + +P L++      V  +  +C   HT A     G+V  WG
Sbjct: 261 SYGQLGTGNKSNQAVPTLINMDKERMV--EVAACHTSHTSAAKTQSGQVLMWG 311



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 59/166 (35%), Positives = 98/166 (59%), Gaps = 3/166 (1%)

Query: 309 GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS-LLGIQIEGVAAGLWHTICI 367
           G H  + T  G +  +G   Y Q G G+T+  L+P  VS+ L+G ++  V+ G  HTI +
Sbjct: 84  GPHVVIATADGEVYAWGHNGYSQLGNGTTNHGLTPALVSTNLIGKRVTEVSCGSHHTIAL 143

Query: 368 SSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKV 427
           ++DG+VYA+G N  GQ+G+G    +  PR + +  L+N    +++CG   +  + D+G+ 
Sbjct: 144 TTDGEVYAWGYNNSGQVGSGSTANQPTPRRV-SSCLQNKVVVNIACGQLCSMAVLDNGET 202

Query: 428 FCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
           + WG+N  GQLGLG+  ++  P ++  ++G     VACG+ HTL L
Sbjct: 203 YGWGYNCNGQLGLGNNGNQQTPCRIAALQGINIIQVACGYAHTLAL 248



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/268 (27%), Positives = 129/268 (48%), Gaps = 32/268 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMV 262
           GD   +  P  + +  G +I +++ G G H +  +  G+V+ WG+ G  QLG G+    +
Sbjct: 57  GDTQSTIEPRRIDILCGKKIISLSYGTGPHVVIATADGEVYAWGHNGYSQLGNGTTNHGL 116

Query: 263 SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL 322
           +     P + S+                      + G  V  ++CG  H+  +T  G + 
Sbjct: 117 T-----PALVST---------------------NLIGKRVTEVSCGSHHTIALTTDGEVY 150

Query: 323 TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE-GVAAGLWHTICISSDGDVYAFGGNQF 381
            +G+   GQ G GST ++ +P  VSS L  ++   +A G   ++ +  +G+ Y +G N  
Sbjct: 151 AWGYNNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDNGETYGWGYNCN 210

Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
           GQLG G +  +  P  + A  L+ ++   V+CG  HT  + D+G V+ WG N YGQLG G
Sbjct: 211 GQLGLGNNGNQQTPCRIAA--LQGINIIQVACGYAHTLALTDEGFVYSWGANSYGQLGTG 268

Query: 442 DVIDRNIPSQVTIEGCVPRNVACGWWHT 469
           +  ++ +P+ + ++    R V     HT
Sbjct: 269 NKSNQAVPTLINMDK--ERMVEVAACHT 294



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 53/110 (48%), Gaps = 3/110 (2%)

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           I ++ + +V+A G N  G LG G  Q+   PR +D    + + S S   G  H  +   D
Sbjct: 35  IYVTVNDEVFALGTNCSGCLGLGDTQSTIEPRRIDILCGKKIISLSYGTGP-HVVIATAD 93

Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPR--NVACGWWHTLLL 472
           G+V+ WG N Y QLG G       P+ V+      R   V+CG  HT+ L
Sbjct: 94  GEVYAWGHNGYSQLGNGTTNHGLTPALVSTNLIGKRVTEVSCGSHHTIAL 143


>gi|149701724|ref|XP_001494887.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Equus
           caballus]
          Length = 988

 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 82/255 (32%), Positives = 119/255 (46%), Gaps = 34/255 (13%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           +R++ V+ G  H+LA+   G+V+ WG G EGQLG G    +  +P  I  +         
Sbjct: 46  LRVSLVSCGQEHSLAVCHRGRVFAWGAGSEGQLGTGEVKGINFTPKKIKTL--------- 96

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DD 339
                             G  +  ++CG  HS  +++ G + ++G    GQ G G     
Sbjct: 97  -----------------TGIKIIQVSCGDYHSLALSEGGQVFSWGKNSQGQLGLGKEFPS 139

Query: 340 ELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL---PR 396
           + SP  V SL GI +  VAAG  H+  +S  G  + +G N  GQL   G+        PR
Sbjct: 140 QDSPQRVRSLEGIPLAQVAAGGAHSFALSVSGTSFGWGNNSAGQLALSGNNVPVQSYKPR 199

Query: 397 LLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IE 455
            + A  L N+    +SCG  HTAV+  +GKVF +G N  GQLG         P  V  I+
Sbjct: 200 SIGA--LRNLGVIYISCGYEHTAVLTQNGKVFTFGDNSCGQLGHSPSAQDRGPQLVERID 257

Query: 456 GCVPRNVACGWWHTL 470
           G V + + CG +HTL
Sbjct: 258 GLVSQ-IDCGSYHTL 271



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 37/218 (16%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G++I  V+ G  H+LALS+ GQV+ WG   +GQLGLG       SP  +  +E       
Sbjct: 98  GIKIIQVSCGDYHSLALSEGGQVFSWGKNSQGQLGLGKEFPSQDSPQRVRSLE------- 150

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGW-----GLYGQCGQ 334
                              G  +  +A GG HS  ++ +G   +FGW     G     G 
Sbjct: 151 -------------------GIPLAQVAAGGAHSFALSVSGT--SFGWGNNSAGQLALSGN 189

Query: 335 GSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL 394
                   P  + +L  + +  ++ G  HT  ++ +G V+ FG N  GQLG      +  
Sbjct: 190 NVPVQSYKPRSIGALRNLGVIYISCGYEHTAVLTQNGKVFTFGDNSCGQLGHSPSAQDRG 249

Query: 395 PRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           P+L++   ++ + S+ + CG+ HT A +   G+V  +G
Sbjct: 250 PQLVE--RIDGLVSQ-IDCGSYHTLAYVYTTGQVVSFG 284



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 74/136 (54%), Gaps = 5/136 (3%)

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL-PRLLDA 400
           +P  + +L  +++  V+ G  H++ +   G V+A+G    GQLGTG  +     P+ +  
Sbjct: 36  NPEPIRTLETLRVSLVSCGQEHSLAVCHRGRVFAWGAGSEGQLGTGEVKGINFTPKKIK- 94

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG-DVIDRNIPSQV-TIEGCV 458
            +L  +    VSCG  H+  +++ G+VF WG N  GQLGLG +   ++ P +V ++EG  
Sbjct: 95  -TLTGIKIIQVSCGDYHSLALSEGGQVFSWGKNSQGQLGLGKEFPSQDSPQRVRSLEGIP 153

Query: 459 PRNVACGWWHTLLLAV 474
              VA G  H+  L+V
Sbjct: 154 LAQVAAGGAHSFALSV 169


>gi|386780812|ref|NP_001248295.1| probable E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
 gi|355687450|gb|EHH26034.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
 gi|355749437|gb|EHH53836.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca fascicularis]
 gi|380817668|gb|AFE80708.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
 gi|383408291|gb|AFH27359.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
          Length = 1050

 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 140/308 (45%), Gaps = 51/308 (16%)

Query: 84  KHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGL 143
           + G  PE      +  I+  A G +H +A+++ G++++WG      +G   G L   T  
Sbjct: 70  REGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG------AGSD-GQLGLMTTE 122

Query: 144 DKDVFERQSSFLTEQVSPRSQVSRSSGG---TSSGTDGRGSGEEGSKRRRISLAKQTAES 200
           D     R    L ++++ ++ +  S G     +   DG+      +   ++ L K+    
Sbjct: 123 DSVAVPR----LIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 201 SSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR 260
           +S         P  V    G+ +A VAAGG H+ ALS  G V+GWG    GQLGL     
Sbjct: 179 AS---------PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE-- 227

Query: 261 MVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA 320
                           KDR +      + ++          V  I+CG  H+AV+T +G 
Sbjct: 228 ----------------KDRESPCHVKLLRTQK---------VVYISCGEEHTAVLTKSGG 262

Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFGGN 379
           + TFG G  GQ G  S +DE++P  V  L+G ++  +A G  HT+  + S G +YAFG  
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 380 QFGQLGTG 387
             GQLGTG
Sbjct: 323 ARGQLGTG 330



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 112/251 (44%), Gaps = 30/251 (11%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
            I  VA G  H+LALSD GQ++ WG G +GQLGL +    V+ P  I             
Sbjct: 85  HIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ------------ 132

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDE 340
                         ++    +  ++CG  H   +   G   T+G   +GQ G G     +
Sbjct: 133 --------------KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
            SP  V SL GI +  VAAG  H+  +S  G V+ +G N  GQLG   ++    P  +  
Sbjct: 179 ASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKL 238

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVP 459
              + V    +SCG  HTAV+   G VF +G    GQLG   + D   P +V  + G   
Sbjct: 239 LRTQKV--VYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEV 296

Query: 460 RNVACGWWHTL 470
             +ACG  HTL
Sbjct: 297 TQIACGRQHTL 307



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 118/255 (46%), Gaps = 38/255 (14%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  VA GG H++ L + G+V+  G   +GQLG     R  + P  I  +           
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG---HEREGNKPEQIGALAD--------- 83

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                             ++  +ACG  HS  ++D G L ++G G  GQ G  +T+D ++
Sbjct: 84  -----------------QHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA 126

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD-QAETLPRLLDA 400
            P  +  L    I  V+ G WH + +++DG  + +G N  GQLG G +  ++  P+    
Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQ--RV 184

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI---EGC 457
            SLE +    V+ G  H+  ++  G VF WG N  GQLGL D  DR  P  V +   +  
Sbjct: 185 RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKV 244

Query: 458 VPRNVACGWWHTLLL 472
           V   ++CG  HT +L
Sbjct: 245 V--YISCGEEHTAVL 257



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 92/369 (24%), Positives = 144/369 (39%), Gaps = 79/369 (21%)

Query: 39  PLTVGS-AWRDVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLP 95
           P  +G+ A + +    CG   ++A+SD  +L +WG+  D     +T+     +P      
Sbjct: 75  PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 96  TEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFL 155
            + +I++ + G  HC+A+   G+ +TWG           G L    GL K+         
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWG-------KNSHGQL----GLGKE--------F 175

Query: 156 TEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLA-------KQTAESSSSGDENL 208
             Q SP  Q  RS  G        G    G+    +SL+          A      DE  
Sbjct: 176 PSQASP--QRVRSLEGIPLAQVAAG----GAHSFALSLSGAVFGWGMNNAGQLGLSDEKD 229

Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
              PC V L    ++  ++ G  HT  L+  G V+ +G G  GQLG  S   M    +P 
Sbjct: 230 RESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDS---MNDEVNPR 286

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHS-AVITDAGALLTFGWG 327
             +E                        + G+ V  IACG +H+ A +  +G +  FG G
Sbjct: 287 RVLE------------------------LMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLG 385
             GQ G G T +   P+ V             G W  H+  +S+  D + +  +   Q+ 
Sbjct: 323 ARGQLGTGHTCNVKCPSPVK------------GYWAAHSGQLSARADRFKY--HIVKQIF 368

Query: 386 TGGDQAETL 394
           +GGDQ   L
Sbjct: 369 SGGDQTFVL 377



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 62/124 (50%), Gaps = 10/124 (8%)

Query: 354 IEGVAAGLWHTICISSDGDVYAFGGNQFGQLG--TGGDQAETLPRLLDAPSLENVHSKSV 411
           ++ VA G  H++ +  DG+VY  G N  GQLG    G++ E +  L D       H   V
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQIGALADQ------HIIHV 89

Query: 412 SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR-NIPSQV-TIEGCVPRNVACGWWHT 469
           +CG  H+  ++D G++F WG    GQLGL    D   +P  +  +       V+CG WH 
Sbjct: 90  ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149

Query: 470 LLLA 473
           L LA
Sbjct: 150 LALA 153


>gi|402869928|ref|XP_003898995.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Papio anubis]
          Length = 1050

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 140/308 (45%), Gaps = 51/308 (16%)

Query: 84  KHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGL 143
           + G  PE      +  I+  A G +H +A+++ G++++WG      +G   G L   T  
Sbjct: 70  REGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG------AGSD-GQLGLMTTE 122

Query: 144 DKDVFERQSSFLTEQVSPRSQVSRSSGG---TSSGTDGRGSGEEGSKRRRISLAKQTAES 200
           D     R    L ++++ ++ +  S G     +   DG+      +   ++ L K+    
Sbjct: 123 DSVAVPR----LIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 201 SSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR 260
           +S         P  V    G+ +A VAAGG H+ ALS  G V+GWG    GQLGL     
Sbjct: 179 AS---------PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE-- 227

Query: 261 MVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA 320
                           KDR +      + ++          V  I+CG  H+AV+T +G 
Sbjct: 228 ----------------KDRESPCHVKLLRTQK---------VVYISCGEEHTAVLTKSGG 262

Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFGGN 379
           + TFG G  GQ G  S +DE++P  V  L+G ++  +A G  HT+  + S G +YAFG  
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 380 QFGQLGTG 387
             GQLGTG
Sbjct: 323 ARGQLGTG 330



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 112/251 (44%), Gaps = 30/251 (11%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
            I  VA G  H+LALSD GQ++ WG G +GQLGL +    V+ P  I             
Sbjct: 85  HIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ------------ 132

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDE 340
                         ++    +  ++CG  H   +   G   T+G   +GQ G G     +
Sbjct: 133 --------------KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
            SP  V SL GI +  VAAG  H+  +S  G V+ +G N  GQLG   ++    P  +  
Sbjct: 179 ASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKL 238

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVP 459
              + V    +SCG  HTAV+   G VF +G    GQLG   + D   P +V  + G   
Sbjct: 239 LRTQKV--VYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEV 296

Query: 460 RNVACGWWHTL 470
             +ACG  HTL
Sbjct: 297 TQIACGRQHTL 307



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 118/255 (46%), Gaps = 38/255 (14%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  VA GG H++ L + G+V+  G   +GQLG     R  + P  I  +           
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG---HEREGNKPEQIGALAD--------- 83

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                             ++  +ACG  HS  ++D G L ++G G  GQ G  +T+D ++
Sbjct: 84  -----------------QHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA 126

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD-QAETLPRLLDA 400
            P  +  L    I  V+ G WH + +++DG  + +G N  GQLG G +  ++  P+    
Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQ--RV 184

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI---EGC 457
            SLE +    V+ G  H+  ++  G VF WG N  GQLGL D  DR  P  V +   +  
Sbjct: 185 RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKV 244

Query: 458 VPRNVACGWWHTLLL 472
           V   ++CG  HT +L
Sbjct: 245 V--YISCGEEHTAVL 257



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 92/369 (24%), Positives = 144/369 (39%), Gaps = 79/369 (21%)

Query: 39  PLTVGS-AWRDVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLP 95
           P  +G+ A + +    CG   ++A+SD  +L +WG+  D     +T+     +P      
Sbjct: 75  PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 96  TEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFL 155
            + +I++ + G  HC+A+   G+ +TWG           G L    GL K+         
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWG-------KNSHGQL----GLGKE--------F 175

Query: 156 TEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLA-------KQTAESSSSGDENL 208
             Q SP  Q  RS  G        G    G+    +SL+          A      DE  
Sbjct: 176 PSQASP--QRVRSLEGIPLAQVAAG----GAHSFALSLSGAVFGWGMNNAGQLGLSDEKD 229

Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
              PC V L    ++  ++ G  HT  L+  G V+ +G G  GQLG  S   M    +P 
Sbjct: 230 RESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDS---MNDEVNPR 286

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHS-AVITDAGALLTFGWG 327
             +E                        + G+ V  IACG +H+ A +  +G +  FG G
Sbjct: 287 RVLE------------------------LMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLG 385
             GQ G G T +   P+ V             G W  H+  +S+  D + +  +   Q+ 
Sbjct: 323 ARGQLGTGHTCNVKCPSPVK------------GYWAAHSGQLSARADRFKY--HIVKQIF 368

Query: 386 TGGDQAETL 394
           +GGDQ   L
Sbjct: 369 SGGDQTFVL 377



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 62/124 (50%), Gaps = 10/124 (8%)

Query: 354 IEGVAAGLWHTICISSDGDVYAFGGNQFGQLG--TGGDQAETLPRLLDAPSLENVHSKSV 411
           ++ VA G  H++ +  DG+VY  G N  GQLG    G++ E +  L D       H   V
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQIGALADQ------HIIHV 89

Query: 412 SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR-NIPSQV-TIEGCVPRNVACGWWHT 469
           +CG  H+  ++D G++F WG    GQLGL    D   +P  +  +       V+CG WH 
Sbjct: 90  ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149

Query: 470 LLLA 473
           L LA
Sbjct: 150 LALA 153


>gi|350418736|ref|XP_003491950.1| PREDICTED: hypothetical protein LOC100748540 [Bombus impatiens]
          Length = 791

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 123/259 (47%), Gaps = 38/259 (14%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G +I  +AAG  H+LAL+  G V+ WG   EGQLGL     +V+ P  +   E       
Sbjct: 144 GSKIVQIAAGSHHSLALTSDGGVFAWGSNLEGQLGLPDVSGLVNKPTKVHIPEP------ 197

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCG-QGSTD 338
                                 VK I+ G  HS  +T++G +   G    G+ G   S  
Sbjct: 198 ----------------------VKQISAGYYHSTFLTESGLVYVCGESESGKLGIDASFS 235

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAET-LPRL 397
            +++P  +   L      VA G  HT+ ++ +G++Y  G N  GQLG G + +E  +P+L
Sbjct: 236 TQVAPKQMQ--LPSPAVHVACGGHHTVILAENGNLYCTGSNSSGQLGLGTNLSELHIPKL 293

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI--- 454
           L    L N     +SCG  HTAV+ + GK++  G  ++G+LGL +  + N   ++T    
Sbjct: 294 LPRGMLRNETITRISCGESHTAVVTESGKLYTCGDGRHGKLGLEE--NENNVHELTFVQR 351

Query: 455 -EGCVPRNVACGWWHTLLL 472
            +     +VACG  HT+L+
Sbjct: 352 YKELFVSDVACGGCHTILV 370



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/184 (35%), Positives = 92/184 (50%), Gaps = 7/184 (3%)

Query: 295 FRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQI 354
           F +  + V  I CG  HSAVI   G L  FG   +GQ G G  +    P+CV +L   ++
Sbjct: 31  FFIRRDPVLSITCGDEHSAVICQTGRLFVFGSNDWGQLGLGHKNHISKPSCVKALKPERV 90

Query: 355 EGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG----GDQAETLPRLLDAPSLENVHSKS 410
             VA G  HT+  +    ++A G +Q GQLG G    GD   T P L+    L       
Sbjct: 91  THVACGRAHTLICTGSQKIFACGSDQEGQLGRGISAIGDSVNT-PVLVYDSGLSGSKIVQ 149

Query: 411 VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR-NIPSQVTIEGCVPRNVACGWWHT 469
           ++ G+ H+  +  DG VF WG N  GQLGL DV    N P++V I   V + ++ G++H+
Sbjct: 150 IAAGSHHSLALTSDGGVFAWGSNLEGQLGLPDVSGLVNKPTKVHIPEPV-KQISAGYYHS 208

Query: 470 LLLA 473
             L 
Sbjct: 209 TFLT 212



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 76/294 (25%), Positives = 129/294 (43%), Gaps = 56/294 (19%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSP----------------- 265
           + ++  G  H+  +   G+++ +G    GQLGLG +   +S P                 
Sbjct: 38  VLSITCGDEHSAVICQTGRLFVFGSNDWGQLGLGHK-NHISKPSCVKALKPERVTHVACG 96

Query: 266 --HPIPCIESSY----GKDRSAALSRGSVNSEGPGFRVP---------GNYVKGIACGGR 310
             H + C  S      G D+   L RG +++ G     P         G+ +  IA G  
Sbjct: 97  RAHTLICTGSQKIFACGSDQEGQLGRG-ISAIGDSVNTPVLVYDSGLSGSKIVQIAAGSH 155

Query: 311 HSAVITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVAAGLWHTICISS 369
           HS  +T  G +  +G  L GQ G       ++ P  V   +   ++ ++AG +H+  ++ 
Sbjct: 156 HSLALTSDGGVFAWGSNLEGQLGLPDVSGLVNKPTKVH--IPEPVKQISAGYYHSTFLTE 213

Query: 370 DGDVYAFGGNQFGQLGTGGD-QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVF 428
            G VY  G ++ G+LG       +  P+ +  PS   VH   V+CG  HT ++A++G ++
Sbjct: 214 SGLVYVCGESESGKLGIDASFSTQVAPKQMQLPSPA-VH---VACGGHHTVILAENGNLY 269

Query: 429 CWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPR---------NVACGWWHTLLLA 473
           C G N  GQLGLG  +     S++ I   +PR          ++CG  HT ++ 
Sbjct: 270 CTGSNSSGQLGLGTNL-----SELHIPKLLPRGMLRNETITRISCGESHTAVVT 318


>gi|332233510|ref|XP_003265945.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Nomascus leucogenys]
          Length = 1050

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 140/308 (45%), Gaps = 51/308 (16%)

Query: 84  KHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGL 143
           + G  PE      +  I+  A G +H +A+++ G++++WG      +G   G L   T  
Sbjct: 70  REGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG------AGSD-GQLGLMTTE 122

Query: 144 DKDVFERQSSFLTEQVSPRSQVSRSSGG---TSSGTDGRGSGEEGSKRRRISLAKQTAES 200
           D     R    L ++++ ++ +  S G     +   DG+      +   ++ L K+    
Sbjct: 123 DSVAVPR----LIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 201 SSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR 260
           +S         P  V    G+ +A VAAGG H+ ALS  G V+GWG    GQLGL     
Sbjct: 179 AS---------PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE-- 227

Query: 261 MVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA 320
                           KDR +      + ++          V  I+CG  H+AV+T +G 
Sbjct: 228 ----------------KDRESPCHVKLLRTQK---------VVYISCGEEHTAVLTKSGG 262

Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFGGN 379
           + TFG G  GQ G  S +DE++P  V  L+G ++  +A G  HT+  + S G +YAFG  
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 380 QFGQLGTG 387
             GQLGTG
Sbjct: 323 ARGQLGTG 330



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 112/251 (44%), Gaps = 30/251 (11%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
            I  VA G  H+LALSD GQ++ WG G +GQLGL +    V+ P  I             
Sbjct: 85  HIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ------------ 132

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDE 340
                         ++    +  ++CG  H   +   G   T+G   +GQ G G     +
Sbjct: 133 --------------KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
            SP  V SL GI +  VAAG  H+  +S  G V+ +G N  GQLG   ++    P  +  
Sbjct: 179 ASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKL 238

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVP 459
              + V    +SCG  HTAV+   G VF +G    GQLG   + D   P +V  + G   
Sbjct: 239 LRTQKV--VYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEV 296

Query: 460 RNVACGWWHTL 470
             +ACG  HTL
Sbjct: 297 TQIACGRQHTL 307



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 118/255 (46%), Gaps = 38/255 (14%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  VA GG H++ L + G+V+  G   +GQLG     R  + P  I  +           
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG---HEREGNKPEQIGALAD--------- 83

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                             ++  +ACG  HS  ++D G L ++G G  GQ G  +T+D ++
Sbjct: 84  -----------------QHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA 126

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD-QAETLPRLLDA 400
            P  +  L    I  V+ G WH + +++DG  + +G N  GQLG G +  ++  P+    
Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQ--RV 184

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI---EGC 457
            SLE +    V+ G  H+  ++  G VF WG N  GQLGL D  DR  P  V +   +  
Sbjct: 185 RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKV 244

Query: 458 VPRNVACGWWHTLLL 472
           V   ++CG  HT +L
Sbjct: 245 V--YISCGEEHTAVL 257



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 92/369 (24%), Positives = 144/369 (39%), Gaps = 79/369 (21%)

Query: 39  PLTVGS-AWRDVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLP 95
           P  +G+ A + +    CG   ++A+SD  +L +WG+  D     +T+     +P      
Sbjct: 75  PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 96  TEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFL 155
            + +I++ + G  HC+A+   G+ +TWG           G L    GL K+         
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWG-------KNSHGQL----GLGKE--------F 175

Query: 156 TEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLA-------KQTAESSSSGDENL 208
             Q SP  Q  RS  G        G    G+    +SL+          A      DE  
Sbjct: 176 PSQASP--QRVRSLEGIPLAQVAAG----GAHSFALSLSGAVFGWGMNNAGQLGLSDEKD 229

Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
              PC V L    ++  ++ G  HT  L+  G V+ +G G  GQLG  S   M    +P 
Sbjct: 230 RESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDS---MNDEVNPR 286

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHS-AVITDAGALLTFGWG 327
             +E                        + G+ V  IACG +H+ A +  +G +  FG G
Sbjct: 287 RVLE------------------------LMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLG 385
             GQ G G T +   P+ V             G W  H+  +S+  D + +  +   Q+ 
Sbjct: 323 ARGQLGTGHTCNVKCPSPVK------------GYWAAHSGQLSARADRFKY--HIVKQIF 368

Query: 386 TGGDQAETL 394
           +GGDQ   L
Sbjct: 369 SGGDQTFVL 377



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 62/124 (50%), Gaps = 10/124 (8%)

Query: 354 IEGVAAGLWHTICISSDGDVYAFGGNQFGQLG--TGGDQAETLPRLLDAPSLENVHSKSV 411
           ++ VA G  H++ +  DG+VY  G N  GQLG    G++ E +  L D       H   V
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQIGALADQ------HIIHV 89

Query: 412 SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR-NIPSQV-TIEGCVPRNVACGWWHT 469
           +CG  H+  ++D G++F WG    GQLGL    D   +P  +  +       V+CG WH 
Sbjct: 90  ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149

Query: 470 LLLA 473
           L LA
Sbjct: 150 LALA 153


>gi|291408944|ref|XP_002720770.1| PREDICTED: regulator of chromosome condensation and BTB domain
           containing protein 2 [Oryctolagus cuniculus]
          Length = 551

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 64/176 (36%), Positives = 102/176 (57%), Gaps = 7/176 (3%)

Query: 303 KGIAC----GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS-LLGIQIEGV 357
           K IAC     G H  + T  G + T+G   Y Q G G+T+  L P  +S+ L   Q+  V
Sbjct: 98  KKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEV 157

Query: 358 AAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARH 417
           A G +H++ ++SDG+V+A+G N  GQ+G+G    + +PR +    L+N    +++CG   
Sbjct: 158 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGPTANQPIPRRVTG-CLQNKVVVNIACGQMC 216

Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
           +  + D G+V+ WG+N  GQLGLG   ++  P +V  ++G   + VACG+ HTL+L
Sbjct: 217 SMAVVDTGEVYVWGYNGNGQLGLGSGGNQPTPCRVAALQGIRVQRVACGYAHTLVL 272



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 124/255 (48%), Gaps = 35/255 (13%)

Query: 220 GVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
           G +IA ++ G G H +  +  G+V+ WG+    QLG G+     ++   +PC  S+    
Sbjct: 97  GKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLGNGT-----TNHGLVPCQIST---- 147

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
                             +    V  +ACG  HS V+T  G +  +G+   GQ G G T 
Sbjct: 148 -----------------NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGPTA 190

Query: 339 DELSPNCVSSLLGIQIE-GVAAGLWHTICISSDGDVYAFGGNQFGQLG--TGGDQAETLP 395
           ++  P  V+  L  ++   +A G   ++ +   G+VY +G N  GQLG  +GG+Q    P
Sbjct: 191 NQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSGGNQ----P 246

Query: 396 RLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
                 +L+ +  + V+CG  HT V+ D+G+V+ WG N YGQLG G+  +++ P+ V +E
Sbjct: 247 TPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVVE 306

Query: 456 -GCVPRNVACGWWHT 469
              +    AC   HT
Sbjct: 307 KDRIIEIAACHSTHT 321



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 112/233 (48%), Gaps = 34/233 (14%)

Query: 203 SGDENLSAFPCLVTLN-PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +G  N    PC ++ N    ++  VA G  H+L L+  G+V+ WGY   GQ+G G     
Sbjct: 133 NGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGP---- 188

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
            ++  PIP         R     +  V             V  IACG   S  + D G +
Sbjct: 189 -TANQPIP--------RRVTGCLQNKV-------------VVNIACGQMCSMAVVDTGEV 226

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             +G+   GQ G GS  ++ +P  V++L GI+++ VA G  HT+ ++ +G VYA+G N +
Sbjct: 227 YVWGYNGNGQLGLGSGGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSY 286

Query: 382 GQLGTGG--DQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           GQLGTG   +Q+   P +++   +  +     +C + HT A     G V+ WG
Sbjct: 287 GQLGTGNKSNQSYPTPVVVEKDRIIEI----AACHSTHTSAAKTQGGHVYMWG 335



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 3/105 (2%)

Query: 370 DGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFC 429
           + +++  G N  G LG G  Q+   PR LD+ S + +   S   G  H  +   +G+VF 
Sbjct: 64  NDEIFVLGTNCSGCLGLGDAQSTIEPRRLDSLSGKKIACLSYGSGP-HVVLATTEGEVFT 122

Query: 430 WGWNKYGQLGLGDVIDRNIPSQVTIEGCVPR--NVACGWWHTLLL 472
           WG N Y QLG G      +P Q++      +   VACG +H+L+L
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVL 167


>gi|339010099|ref|ZP_08642670.1| copper amine oxidase domain protein [Brevibacillus laterosporus LMG
           15441]
 gi|338773369|gb|EGP32901.1| copper amine oxidase domain protein [Brevibacillus laterosporus LMG
           15441]
          Length = 392

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 76/262 (29%), Positives = 123/262 (46%), Gaps = 30/262 (11%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES--------- 273
           +  V  G  HT+AL   G VW WG+   G+LG         +PH +  +           
Sbjct: 85  VLMVDTGTSHTVALQKDGTVWTWGWSAYGELGNEKAKSTEKTPHHVKWLSDVKQVRAGEN 144

Query: 274 ------------SYGKDRSAALSRGSVNSEGPGFRVPG-NYVKGIACGGRHSAVITDAGA 320
                       ++GK+RS  L  G+  +     +V G   +  I  G   S  +++ G 
Sbjct: 145 FTLALKEDGTVWAFGKNRSGQLGDGTTETRVKPVQVSGLTDIVAIDAGEEFSLALSEDGT 204

Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
           +  +G    GQ G G+ +  L P  VS L    +  ++ G      ++S+GDVY +G NQ
Sbjct: 205 VWAWGNNSVGQLGNGTREKALQPVQVSEL--TDVIAISTGEKQGYAVTSNGDVYGWGYNQ 262

Query: 381 FGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL 440
            G+LG G +++   P L+D   + +V   +V  G +HT  + +DG V+ WG N +GQLG 
Sbjct: 263 -GKLGDGTNKSRNSPVLIDG--IYDV--IAVDSGKQHTLALKEDGTVWAWGTNTHGQLGY 317

Query: 441 GDVIDRNI-PSQVTIEGCVPRN 461
           G  ++ ++ P+QV +E   P N
Sbjct: 318 GTPVNYSMTPNQVFLESTEPLN 339



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 97/389 (24%), Positives = 161/389 (41%), Gaps = 58/389 (14%)

Query: 67  ITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKE 126
           + +G+  D      +S   G+   P P+   + ++    G +H VA+ + G V+TWGW  
Sbjct: 52  VIYGTGSDANGVLGSSSVKGKTTSPVPVDDLSDVLMVDTGTSHTVALQKDGTVWTWGW-- 109

Query: 127 CVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGS 186
                  +G+L    G +K     ++    + +S   QV R+    +      G+     
Sbjct: 110 -----SAYGEL----GNEKAKSTEKTPHHVKWLSDVKQV-RAGENFTLALKEDGTVWAFG 159

Query: 187 KRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWG 246
           K R   L   T E+              V ++    I  + AG   +LALS+ G VW WG
Sbjct: 160 KNRSGQLGDGTTETRVKP----------VQVSGLTDIVAIDAGEEFSLALSEDGTVWAWG 209

Query: 247 YGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIA 306
               GQLG G+R + +    P+   E +                           V  I+
Sbjct: 210 NNSVGQLGNGTREKAL---QPVQVSELTD--------------------------VIAIS 240

Query: 307 CGGRHSAVITDAGALLTFGWGL-YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTI 365
            G +    +T  G +  +GWG   G+ G G+     SP  +  +    +  V +G  HT+
Sbjct: 241 TGEKQGYAVTSNGDV--YGWGYNQGKLGDGTNKSRNSPVLIDGIY--DVIAVDSGKQHTL 296

Query: 366 CISSDGDVYAFGGNQFGQLGTGGDQAETL-PRLLDAPSLENVHS-KSVSCGARHTAVIAD 423
            +  DG V+A+G N  GQLG G     ++ P  +   S E ++   ++  G  H+  I  
Sbjct: 297 ALKEDGTVWAWGTNTHGQLGYGTPVNYSMTPNQVFLESTEPLNQIVAIDAGGFHSHAIKK 356

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
           DG V+ WG+N  G+LGLG    +  P+++
Sbjct: 357 DGTVWSWGFNSNGELGLGHSKKQMYPAKI 385



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 74/270 (27%), Positives = 113/270 (41%), Gaps = 33/270 (12%)

Query: 227 AAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES----SYGKDRSAA 282
           A   R  +   D   ++G G    G LG  S     +SP P+  +        G   + A
Sbjct: 38  ADNNRTFMVKKDGSVIYGTGSDANGVLGSSSVKGKTTSPVPVDDLSDVLMVDTGTSHTVA 97

Query: 283 LSR------------GSVNSEGPGF--RVPGNY-----VKGIACGGRHSAVITDAGALLT 323
           L +            G + +E      + P +      VK +  G   +  + + G +  
Sbjct: 98  LQKDGTVWTWGWSAYGELGNEKAKSTEKTPHHVKWLSDVKQVRAGENFTLALKEDGTVWA 157

Query: 324 FGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQ 383
           FG    GQ G G+T+  + P  VS L    I  + AG   ++ +S DG V+A+G N  GQ
Sbjct: 158 FGKNRSGQLGDGTTETRVKPVQVSGL--TDIVAIDAGEEFSLALSEDGTVWAWGNNSVGQ 215

Query: 384 LGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDV 443
           LG G  +    P  +    L +V   ++S G +    +  +G V+ WG+N+ G+LG G  
Sbjct: 216 LGNGTREKALQP--VQVSELTDV--IAISTGEKQGYAVTSNGDVYGWGYNQ-GKLGDGTN 270

Query: 444 IDRNIPSQVTIEGCVPR-NVACGWWHTLLL 472
             RN P  V I+G      V  G  HTL L
Sbjct: 271 KSRNSP--VLIDGIYDVIAVDSGKQHTLAL 298



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 105/262 (40%), Gaps = 51/262 (19%)

Query: 90  EPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFE 149
           +P  +     IV   AG    +A++E G V+ WG           G L  GT        
Sbjct: 176 KPVQVSGLTDIVAIDAGEEFSLALSEDGTVWAWG-------NNSVGQLGNGT-------- 220

Query: 150 RQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGE-EGSKRRRISLAKQTAESSSSGDENL 208
           R+ +    QVS  + V   S G   G     +G+  G    +  L   T +S +S     
Sbjct: 221 REKALQPVQVSELTDVIAISTGEKQGYAVTSNGDVYGWGYNQGKLGDGTNKSRNS----- 275

Query: 209 SAFPCLVTLNPGVR-IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHP 267
              P L+    G+  +  V +G +HTLAL + G VW WG    GQLG G+ +    +P+ 
Sbjct: 276 ---PVLI---DGIYDVIAVDSGKQHTLALKEDGTVWAWGTNTHGQLGYGTPVNYSMTPNQ 329

Query: 268 IPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWG 327
           +  +ES+                       P N +  I  GG HS  I   G + ++G+ 
Sbjct: 330 V-FLESTE----------------------PLNQIVAIDAGGFHSHAIKKDGTVWSWGFN 366

Query: 328 LYGQCGQGSTDDELSPNCVSSL 349
             G+ G G +  ++ P  + ++
Sbjct: 367 SNGELGLGHSKKQMYPAKIETI 388


>gi|417405695|gb|JAA49551.1| Putative e3 ubiquitin-protein ligase herc3 [Desmodus rotundus]
          Length = 1050

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 112/251 (44%), Gaps = 30/251 (11%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
            I  VA G  H+LALSD GQ++ WG G +GQLGL +    V+ P  I             
Sbjct: 85  HIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ------------ 132

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDE 340
                         ++    +  ++CG  H   +   G   T+G   +GQ G G     +
Sbjct: 133 --------------KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
            SP  V SL GI +  VAAG  H+  +S  G V+ +G N  GQLG   ++    P  +  
Sbjct: 179 ASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKL 238

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVP 459
              + V    +SCG  HTAV+   G VF +G    GQLG   + D   P +V  + G   
Sbjct: 239 LRTQKV--VYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEV 296

Query: 460 RNVACGWWHTL 470
             +ACG  HTL
Sbjct: 297 TQIACGRQHTL 307



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 140/308 (45%), Gaps = 51/308 (16%)

Query: 84  KHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGL 143
           + G  PE      +  IV  A G +H +A+++ G++++WG      +G   G L   T  
Sbjct: 70  REGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWG------AGSD-GQLGLMTTE 122

Query: 144 DKDVFERQSSFLTEQVSPRSQVSRSSGG---TSSGTDGRGSGEEGSKRRRISLAKQTAES 200
           D     R    L ++++ ++ +  S G     +   DG+      +   ++ L K+    
Sbjct: 123 DSVAVPR----LIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 201 SSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR 260
           +S         P  V    G+ +A VAAGG H+ ALS  G V+GWG    GQLGL     
Sbjct: 179 AS---------PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE-- 227

Query: 261 MVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA 320
                           +DR +      + ++          V  I+CG  H+AV+T +G 
Sbjct: 228 ----------------EDRESPCHVKLLRTQK---------VVYISCGEEHTAVLTKSGG 262

Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFGGN 379
           + TFG G  GQ G  S +DE++P  V  L+G ++  +A G  HT+  + S G +YAFG  
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 380 QFGQLGTG 387
             GQLGTG
Sbjct: 323 ARGQLGTG 330



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 118/255 (46%), Gaps = 38/255 (14%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  VA GG H++ L + G+V+  G   +GQLG     R  + P  I  +           
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG---HEREGNKPEQIGAL----------- 81

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                             ++  +ACG  HS  ++D G L ++G G  GQ G  +T+D ++
Sbjct: 82  ---------------ADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA 126

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD-QAETLPRLLDA 400
            P  +  L    I  V+ G WH + +++DG  + +G N  GQLG G +  ++  P+    
Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQ--RV 184

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI---EGC 457
            SLE +    V+ G  H+  ++  G VF WG N  GQLGL D  DR  P  V +   +  
Sbjct: 185 RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKV 244

Query: 458 VPRNVACGWWHTLLL 472
           V   ++CG  HT +L
Sbjct: 245 V--YISCGEEHTAVL 257



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 92/369 (24%), Positives = 144/369 (39%), Gaps = 79/369 (21%)

Query: 39  PLTVGS-AWRDVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLP 95
           P  +G+ A + +    CG   ++A+SD  +L +WG+  D     +T+     +P      
Sbjct: 75  PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 96  TEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFL 155
            + +I++ + G  HC+A+   G+ +TWG           G L    GL K+         
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWG-------KNSHGQL----GLGKE--------F 175

Query: 156 TEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLA-------KQTAESSSSGDENL 208
             Q SP  Q  RS  G        G    G+    +SL+          A      DE  
Sbjct: 176 PSQASP--QRVRSLEGIPLAQVAAG----GAHSFALSLSGAVFGWGMNNAGQLGLSDEED 229

Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
              PC V L    ++  ++ G  HT  L+  G V+ +G G  GQLG  S   M    +P 
Sbjct: 230 RESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDS---MNDEVNPR 286

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHS-AVITDAGALLTFGWG 327
             +E                        + G+ V  IACG +H+ A +  +G +  FG G
Sbjct: 287 RVLE------------------------LMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLG 385
             GQ G G T +   P+ V             G W  H+  +S+  D + +  +   Q+ 
Sbjct: 323 ARGQLGTGHTCNVKCPSPVK------------GYWAAHSGQLSARSDRFKY--HIVKQIF 368

Query: 386 TGGDQAETL 394
           +GGDQ   L
Sbjct: 369 SGGDQTFVL 377



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 62/124 (50%), Gaps = 10/124 (8%)

Query: 354 IEGVAAGLWHTICISSDGDVYAFGGNQFGQLG--TGGDQAETLPRLLDAPSLENVHSKSV 411
           ++ VA G  H++ +  DG+VY  G N  GQLG    G++ E +  L D       H   V
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQIGALADQ------HIVHV 89

Query: 412 SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR-NIPSQV-TIEGCVPRNVACGWWHT 469
           +CG  H+  ++D G++F WG    GQLGL    D   +P  +  +       V+CG WH 
Sbjct: 90  ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149

Query: 470 LLLA 473
           L LA
Sbjct: 150 LALA 153


>gi|255539128|ref|XP_002510629.1| guanine nucleotide exchange factor P532, putative [Ricinus
           communis]
 gi|223551330|gb|EEF52816.1| guanine nucleotide exchange factor P532, putative [Ricinus
           communis]
          Length = 450

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 132/269 (49%), Gaps = 37/269 (13%)

Query: 204 GDENLSAFPCLVTLNPGVRIAT-VAAGGRHTLALSDIGQVWGWGYGGEGQLGL------- 255
           G EN    P   TLNP +  A  VA GG H++AL+ +GQV+ WGYGG G LG        
Sbjct: 141 GHENPVFVP---TLNPNLDPAKCVALGGVHSVALTSLGQVFTWGYGGFGALGHCVYHREL 197

Query: 256 ---------GSRIRMV--SSPHPIPCIES----SYGKDR---SAALSRGSVNSEGPGFRV 297
                      +IR +  S  H     E+    ++G+D       L  G   +EG G  +
Sbjct: 198 LPRLVQGISNEKIRHIATSGTHTAAITETGEVYTWGRDEGDGRLGLGPGRGPNEGGGLSI 257

Query: 298 PGNY------VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
           P         V  + CGG  +AV+T+ G +  +G     + G+G+      P  + +L G
Sbjct: 258 PSKVKALTVPVAAVFCGGFFTAVLTEEGQIWNWGANSNYELGRGNKTGGWQPKPIPNLEG 317

Query: 352 IQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSV 411
           +++  +A+G +H++ ++ +G V ++G    GQLG    Q + +P ++DA  L +     +
Sbjct: 318 VRVIQIASGGYHSLALTDEGKVLSWGFGGHGQLGHPSIQNQKIPMVIDA--LADQRVVYI 375

Query: 412 SCGARHTAVIADDGKVFCWGWNKYGQLGL 440
           +CG   +A I D+GK++ WG  K  QLG+
Sbjct: 376 ACGGSTSAAITDEGKLYMWGNAKDSQLGV 404



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 112/292 (38%), Gaps = 52/292 (17%)

Query: 103 AAAGWAHCVAVTEGGEVYTWGW------KECVPSGRVFGDLSTGTGLDKDVFERQSSFLT 156
            A G  H VA+T  G+V+TWG+        CV    +   L  G   +K      S   T
Sbjct: 161 VALGGVHSVALTSLGQVFTWGYGGFGALGHCVYHRELLPRLVQGISNEKIRHIATSGTHT 220

Query: 157 EQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVT 216
             ++   +V          T GR  G+            +    S          P    
Sbjct: 221 AAITETGEVY---------TWGRDEGDGRLGLGPGRGPNEGGGLSIPSKVKALTVP---- 267

Query: 217 LNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYG 276
                 +A V  GG  T  L++ GQ+W WG     +LG G++      P PIP +E    
Sbjct: 268 ------VAAVFCGGFFTAVLTEEGQIWNWGANSNYELGRGNKTGG-WQPKPIPNLE---- 316

Query: 277 KDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGS 336
                                 G  V  IA GG HS  +TD G +L++G+G +GQ G  S
Sbjct: 317 ----------------------GVRVIQIASGGYHSLALTDEGKVLSWGFGGHGQLGHPS 354

Query: 337 TDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGG 388
             ++  P  + +L   ++  +A G   +  I+ +G +Y +G  +  QLG  G
Sbjct: 355 IQNQKIPMVIDALADQRVVYIACGGSTSAAITDEGKLYMWGNAKDSQLGVPG 406



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 92/197 (46%), Gaps = 17/197 (8%)

Query: 241 QVWGWGYGGEGQLGLG-SRIRMVSSP----HPIPCIES-SYGKDRSAALSRGSVNSEGPG 294
           Q+  WG G  GQLG G    R+  SP    H +P   S S    +    ++ S  ++   
Sbjct: 48  QLLSWGRGSSGQLGGGIEETRLYPSPVANLHALPSSFSLSPTPGQLLIKNQNSTITKQEA 107

Query: 295 FRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQI 354
             V      GI+CG  HSA++ D G +  +G G  G+ G G  +    P    +L   + 
Sbjct: 108 IEV------GISCGLFHSALLVD-GNIWIWGKGDGGRLGFGHENPVFVPTLNPNLDPAKC 160

Query: 355 EGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
             VA G  H++ ++S G V+ +G   FG LG      E LPRL+   S E +  + ++  
Sbjct: 161 --VALGGVHSVALTSLGQVFTWGYGGFGALGHCVYHRELLPRLVQGISNEKI--RHIATS 216

Query: 415 ARHTAVIADDGKVFCWG 431
             HTA I + G+V+ WG
Sbjct: 217 GTHTAAITETGEVYTWG 233


>gi|7657152|ref|NP_055421.1| probable E3 ubiquitin-protein ligase HERC3 isoform 1 [Homo sapiens]
 gi|397480079|ref|XP_003811323.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Pan paniscus]
 gi|426344933|ref|XP_004039158.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Gorilla gorilla gorilla]
 gi|2495699|sp|Q15034.1|HERC3_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC3; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           3
 gi|119626429|gb|EAX06024.1| hect domain and RLD 3 [Homo sapiens]
 gi|158261003|dbj|BAF82679.1| unnamed protein product [Homo sapiens]
 gi|168274306|dbj|BAG09573.1| E3 ubiquitin-protein ligase HERC3 [synthetic construct]
 gi|187252515|gb|AAI66672.1| Hect domain and RLD 3 [synthetic construct]
 gi|410211922|gb|JAA03180.1| hect domain and RLD 3 [Pan troglodytes]
 gi|410261200|gb|JAA18566.1| hect domain and RLD 3 [Pan troglodytes]
 gi|410295580|gb|JAA26390.1| hect domain and RLD 3 [Pan troglodytes]
 gi|410339519|gb|JAA38706.1| hect domain and RLD 3 [Pan troglodytes]
          Length = 1050

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 140/308 (45%), Gaps = 51/308 (16%)

Query: 84  KHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGL 143
           + G  PE      +  I+  A G +H +A+++ G++++WG      +G   G L   T  
Sbjct: 70  REGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG------AGSD-GQLGLMTTE 122

Query: 144 DKDVFERQSSFLTEQVSPRSQVSRSSGG---TSSGTDGRGSGEEGSKRRRISLAKQTAES 200
           D     R    L ++++ ++ +  S G     +   DG+      +   ++ L K+    
Sbjct: 123 DSVAVPR----LIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 201 SSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR 260
           +S         P  V    G+ +A VAAGG H+ ALS  G V+GWG    GQLGL     
Sbjct: 179 AS---------PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE-- 227

Query: 261 MVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA 320
                           KDR +      + ++          V  I+CG  H+AV+T +G 
Sbjct: 228 ----------------KDRESPCHVKLLRTQK---------VVYISCGEEHTAVLTKSGG 262

Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFGGN 379
           + TFG G  GQ G  S +DE++P  V  L+G ++  +A G  HT+  + S G +YAFG  
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 380 QFGQLGTG 387
             GQLGTG
Sbjct: 323 ARGQLGTG 330



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 112/251 (44%), Gaps = 30/251 (11%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
            I  VA G  H+LALSD GQ++ WG G +GQLGL +    V+ P  I             
Sbjct: 85  HIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ------------ 132

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDE 340
                         ++    +  ++CG  H   +   G   T+G   +GQ G G     +
Sbjct: 133 --------------KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
            SP  V SL GI +  VAAG  H+  +S  G V+ +G N  GQLG   ++    P  +  
Sbjct: 179 ASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKL 238

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVP 459
              + V    +SCG  HTAV+   G VF +G    GQLG   + D   P +V  + G   
Sbjct: 239 LRTQKV--VYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEV 296

Query: 460 RNVACGWWHTL 470
             +ACG  HTL
Sbjct: 297 TQIACGRQHTL 307



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 118/255 (46%), Gaps = 38/255 (14%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  VA GG H++ L + G+V+  G   +GQLG     R  + P  I  +           
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG---HEREGNKPEQIGALAD--------- 83

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                             ++  +ACG  HS  ++D G L ++G G  GQ G  +T+D ++
Sbjct: 84  -----------------QHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA 126

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD-QAETLPRLLDA 400
            P  +  L    I  V+ G WH + +++DG  + +G N  GQLG G +  ++  P+    
Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQ--RV 184

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI---EGC 457
            SLE +    V+ G  H+  ++  G VF WG N  GQLGL D  DR  P  V +   +  
Sbjct: 185 RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKV 244

Query: 458 VPRNVACGWWHTLLL 472
           V   ++CG  HT +L
Sbjct: 245 V--YISCGEEHTAVL 257



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 92/369 (24%), Positives = 144/369 (39%), Gaps = 79/369 (21%)

Query: 39  PLTVGS-AWRDVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLP 95
           P  +G+ A + +    CG   ++A+SD  +L +WG+  D     +T+     +P      
Sbjct: 75  PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 96  TEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFL 155
            + +I++ + G  HC+A+   G+ +TWG           G L    GL K+         
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWG-------KNSHGQL----GLGKE--------F 175

Query: 156 TEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLA-------KQTAESSSSGDENL 208
             Q SP  Q  RS  G        G    G+    +SL+          A      DE  
Sbjct: 176 PSQASP--QRVRSLEGIPLAQVAAG----GAHSFALSLSGAVFGWGMNNAGQLGLSDEKD 229

Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
              PC V L    ++  ++ G  HT  L+  G V+ +G G  GQLG  S   M    +P 
Sbjct: 230 RESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDS---MNDEVNPR 286

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHS-AVITDAGALLTFGWG 327
             +E                        + G+ V  IACG +H+ A +  +G +  FG G
Sbjct: 287 RVLE------------------------LMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLG 385
             GQ G G T +   P+ V             G W  H+  +S+  D + +  +   Q+ 
Sbjct: 323 ARGQLGTGHTCNVKCPSPVK------------GYWAAHSGQLSARADRFKY--HIVKQIF 368

Query: 386 TGGDQAETL 394
           +GGDQ   L
Sbjct: 369 SGGDQTFVL 377



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 62/124 (50%), Gaps = 10/124 (8%)

Query: 354 IEGVAAGLWHTICISSDGDVYAFGGNQFGQLG--TGGDQAETLPRLLDAPSLENVHSKSV 411
           ++ VA G  H++ +  DG+VY  G N  GQLG    G++ E +  L D       H   V
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQIGALADQ------HIIHV 89

Query: 412 SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR-NIPSQV-TIEGCVPRNVACGWWHT 469
           +CG  H+  ++D G++F WG    GQLGL    D   +P  +  +       V+CG WH 
Sbjct: 90  ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149

Query: 470 LLLA 473
           L LA
Sbjct: 150 LALA 153


>gi|302796691|ref|XP_002980107.1| hypothetical protein SELMODRAFT_112120 [Selaginella moellendorffii]
 gi|300152334|gb|EFJ18977.1| hypothetical protein SELMODRAFT_112120 [Selaginella moellendorffii]
          Length = 1090

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 127/258 (49%), Gaps = 41/258 (15%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G+R+++VA G  HT  ++  GQ++ +G G  G LG                    +G  R
Sbjct: 413 GIRVSSVACGVWHTALVTSAGQLFTFGDGTFGVLG--------------------HGDKR 452

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITD-----------AGALLTFGWGL 328
           S AL +  V S      + G     +ACG  H+A + +           +G L T+G G 
Sbjct: 453 SVALPK-EVES------LKGLKTVRVACGVWHTAAVVEVMVGYSNAGGSSGKLFTWGDGD 505

Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGG 388
            G+ G G  + +L P CV++L+    + VA G   T+ ++ +G V+  G + +GQLG   
Sbjct: 506 KGRLGHGDKEQKLVPTCVAALVDYNFKQVACGHTLTVALTINGRVFTMGSSLYGQLGDVR 565

Query: 389 DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNI 448
              + LP L++   L     + ++CGA H AV+    +V+ WG    G+LG GDV+DRN 
Sbjct: 566 ADGK-LPGLVEG-RLWEAFVEEIACGAYHVAVLTAKTEVYTWGKGANGRLGHGDVMDRNT 623

Query: 449 PSQV-TIEGCVPRNVACG 465
           P+ V  ++    ++VACG
Sbjct: 624 PTLVEALKEKQVKSVACG 641



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 137/294 (46%), Gaps = 49/294 (16%)

Query: 199 ESSSSGD---ENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGL 255
           ES  SGD   +  S  P  +     + +  +A G RH   ++  G+V+ WG    G+LG 
Sbjct: 282 ESVGSGDGGIKTDSLLPKALESAVVLDVHHIACGNRHAALVTKQGEVFCWGDESGGRLGH 341

Query: 256 GSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVI 315
           G  +  V+ P  +  +               + N+E             +ACG  HS  +
Sbjct: 342 GVDVD-VAHPKLVEAL--------------ATTNTE------------FVACGEYHSCAV 374

Query: 316 TDAGALLTFGWGL--YGQCGQGSTDDELSPNCV-SSLLGIQIEGVAAGLWHTICISSDGD 372
           T +G L T+G G   YG  G G+     +P  V   L GI++  VA G+WHT  ++S G 
Sbjct: 375 TLSGDLFTWGDGTHSYGLLGHGNDISHWTPKRVGGPLEGIRVSSVACGVWHTALVTSAGQ 434

Query: 373 VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD--------- 423
           ++ FG   FG LG G  ++  LP+ ++  SL+ + +  V+CG  HTA + +         
Sbjct: 435 LFTFGDGTFGVLGHGDKRSVALPKEVE--SLKGLKTVRVACGVWHTAAVVEVMVGYSNAG 492

Query: 424 --DGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLAV 474
              GK+F WG    G+LG GD   + +P+ V  +     + VACG  HTL +A+
Sbjct: 493 GSSGKLFTWGDGDKGRLGHGDKEQKLVPTCVAALVDYNFKQVACG--HTLTVAL 544



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 77/155 (49%), Gaps = 7/155 (4%)

Query: 323 TFGWGLYGQCGQGSTD-DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
            F WG     G G    D L P  + S + + +  +A G  H   ++  G+V+ +G    
Sbjct: 277 VFLWGESVGSGDGGIKTDSLLPKALESAVVLDVHHIACGNRHAALVTKQGEVFCWGDESG 336

Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW--GWNKYGQLG 439
           G+LG G D     P+L++A  L   +++ V+CG  H+  +   G +F W  G + YG LG
Sbjct: 337 GRLGHGVDVDVAHPKLVEA--LATTNTEFVACGEYHSCAVTLSGDLFTWGDGTHSYGLLG 394

Query: 440 LGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLL 472
            G+ I    P +V   +EG    +VACG WHT L+
Sbjct: 395 HGNDISHWTPKRVGGPLEGIRVSSVACGVWHTALV 429



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 102/230 (44%), Gaps = 42/230 (18%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDI-----------GQVWGWGYGGEGQ 252
           GD+   A P  V    G++   VA G  HT A+ ++           G+++ WG G +G+
Sbjct: 449 GDKRSVALPKEVESLKGLKTVRVACGVWHTAAVVEVMVGYSNAGGSSGKLFTWGDGDKGR 508

Query: 253 LGLGSRIRMVSSPHPIP-CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRH 311
           LG G + + +     +P C+         AAL             V  N+ K +ACG   
Sbjct: 509 LGHGDKEQKL-----VPTCV---------AAL-------------VDYNF-KQVACGHTL 540

Query: 312 SAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDG 371
           +  +T  G + T G  LYGQ G    D +L       L    +E +A G +H   +++  
Sbjct: 541 TVALTINGRVFTMGSSLYGQLGDVRADGKLPGLVEGRLWEAFVEEIACGAYHVAVLTAKT 600

Query: 372 DVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
           +VY +G    G+LG G       P L++A  L+    KSV+CG+  TA I
Sbjct: 601 EVYTWGKGANGRLGHGDVMDRNTPTLVEA--LKEKQVKSVACGSGFTAAI 648


>gi|50978834|ref|NP_001003126.1| X-linked retinitis pigmentosa GTPase regulator [Canis lupus
           familiaris]
 gi|23396836|sp|Q9N1T2.1|RPGR_CANFA RecName: Full=X-linked retinitis pigmentosa GTPase regulator;
           Flags: Precursor
 gi|8131936|gb|AAF73144.1|AF148801_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
           familiaris]
          Length = 1003

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 58/170 (34%), Positives = 92/170 (54%), Gaps = 2/170 (1%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           ++CG  H+AV+T    L  FG   +GQ G GS      P CV +L   +++  A G  HT
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT 99

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           +  +  G VYA GGN  GQLG G  +  +   L+   + +    K +S G+  +A + +D
Sbjct: 100 LVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQR-KIKQLSAGSNTSAALTED 158

Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAV 474
           G++F WG N  GQ+GL +V +  +P QVT+ G     ++CG++H+  +  
Sbjct: 159 GELFMWGDNSEGQIGLENVTNVCVPQQVTV-GKPISWISCGYYHSAFVTT 207



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 144/301 (47%), Gaps = 51/301 (16%)

Query: 213 CLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR--------IRMVSS 264
           C+  L P  ++   A G  HTL  ++ G+V+  G   EGQLGLG          I   +S
Sbjct: 80  CVKALKPE-KVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTS 138

Query: 265 PHPIPCIESSYGKDRSAALSRGSV------NSEG------------PGFRVPGNYVKGIA 306
              I  +  S G + SAAL+          NSEG            P     G  +  I+
Sbjct: 139 QRKIKQL--SAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVGKPISWIS 196

Query: 307 CGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL-----SPNCVSSLLGIQIEGVAAGL 361
           CG  HSA +T  G L TFG     +CG+    ++L      P  V  + G  ++ VA G 
Sbjct: 197 CGYYHSAFVTTEGQLYTFGEP---ECGKLGLPNQLLVNHRMPQPVPGIPGKVVQ-VACGG 252

Query: 362 WHTICISSDGDVYAFGGNQFGQLGTGGDQAET-LPRLLDAPSLENVHSKSVS---CGARH 417
            HT+ ++    VY FG  QFGQLG G    ET +P+     ++E++  + +S   CG  H
Sbjct: 253 GHTVVLTEKA-VYTFGLGQFGQLGLGTFLFETSVPK-----AIEHIKDQKISFIACGENH 306

Query: 418 TAVIADDGKVFCWGWNKYGQLGLG--DVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLAV 474
           TA+I D G ++ +G  ++G+LGLG  +  ++ IP+  +     + + V+CG  HTL+ A 
Sbjct: 307 TALITDMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGGCHTLVFAT 366

Query: 475 P 475
           P
Sbjct: 367 P 367



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 96/333 (28%), Positives = 144/333 (43%), Gaps = 72/333 (21%)

Query: 103 AAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPR 162
           AA G  H +  TEGG+VY  G       G   G L  G   ++  F    SF T Q   +
Sbjct: 92  AACGRNHTLVSTEGGKVYAAG-------GNNEGQLGLGDTEERSTF-HLISFFTSQRKIK 143

Query: 163 SQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSA--FPCLVT 216
              + S+   +   DG     G   EG    +I L            EN++    P  VT
Sbjct: 144 QLSAGSNTSAALTEDGELFMWGDNSEG----QIGL------------ENVTNVCVPQQVT 187

Query: 217 LNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI----RMVSSPHPIPCIE 272
           +  G  I+ ++ G  H+  ++  GQ++ +G    G+LGL +++    RM   P P+P I 
Sbjct: 188 V--GKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRM---PQPVPGI- 241

Query: 273 SSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQC 332
                                    PG  V+ +ACGG H+ V+T+  A+ TFG G +GQ 
Sbjct: 242 -------------------------PGKVVQ-VACGGGHTVVLTEK-AVYTFGLGQFGQL 274

Query: 333 GQGSTDDELS-PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
           G G+   E S P  +  +   +I  +A G  HT  I+  G +Y FG  + G+LG G + +
Sbjct: 275 GLGTFLFETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLGLGLENS 334

Query: 392 --ETLPRLLDAPSLENVHSKSVSCGARHTAVIA 422
             + +P L    +      + VSCG  HT V A
Sbjct: 335 TNQFIPTL--CSNFLRFIVQLVSCGGCHTLVFA 365



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 120/265 (45%), Gaps = 62/265 (23%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
           ++ G  HT  ++   +++ +G    GQLGLGS+   VS P    C+++            
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSK-STVSKP---TCVKA------------ 83

Query: 286 GSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNC 345
                      +    VK  ACG  H+ V T+ G +   G    GQ G G T++  + + 
Sbjct: 84  -----------LKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHL 132

Query: 346 VSSLLGI-QIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLE 404
           +S      +I+ ++AG   +  ++ DG+++ +G N  GQ+G                 LE
Sbjct: 133 ISFFTSQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIG-----------------LE 175

Query: 405 NVHSKSV-------------SCGARHTAVIADDGKVFCWGWNKYGQLGLGD--VIDRNIP 449
           NV +  V             SCG  H+A +  +G+++ +G  + G+LGL +  +++  +P
Sbjct: 176 NVTNVCVPQQVTVGKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMP 235

Query: 450 SQVT-IEGCVPRNVACGWWHTLLLA 473
             V  I G V + VACG  HT++L 
Sbjct: 236 QPVPGIPGKVVQ-VACGGGHTVVLT 259


>gi|395834129|ref|XP_003790065.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Otolemur
           garnettii]
          Length = 1050

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 113/251 (45%), Gaps = 30/251 (11%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
            I  VA G  H+LALSD GQ++ WG G +GQLGL +    V+ P  I             
Sbjct: 85  HIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLTTTEDSVAVPRLIQ------------ 132

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDE 340
                         ++    +  ++CG  H   +   G   T+G   +GQ G G     +
Sbjct: 133 --------------KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
            SP  V SL GI +  VAAG  H+  +S  G V+ +G N  GQLG   ++    P  +  
Sbjct: 179 ASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKL 238

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVP 459
              + V    +SCG  HTAV+  +G VF +G    GQLG   + D   P +V  + G   
Sbjct: 239 LRTQKV--VYISCGEEHTAVLTKNGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEV 296

Query: 460 RNVACGWWHTL 470
             +ACG  HTL
Sbjct: 297 TQIACGRQHTL 307



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 139/308 (45%), Gaps = 51/308 (16%)

Query: 84  KHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGL 143
           + G  PE      +  I+  A G +H +A+++ G++++WG      +G   G L   T  
Sbjct: 70  REGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG------AGSD-GQLGLTTTE 122

Query: 144 DKDVFERQSSFLTEQVSPRSQVSRSSGG---TSSGTDGRGSGEEGSKRRRISLAKQTAES 200
           D     R    L ++++ ++ +  S G     +   DG+      +   ++ L K+    
Sbjct: 123 DSVAVPR----LIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 201 SSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR 260
           +S         P  V    G+ +A VAAGG H+ ALS  G V+GWG    GQLGL     
Sbjct: 179 AS---------PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE-- 227

Query: 261 MVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA 320
                           KDR +      + ++          V  I+CG  H+AV+T  G 
Sbjct: 228 ----------------KDRESPCHVKLLRTQK---------VVYISCGEEHTAVLTKNGG 262

Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFGGN 379
           + TFG G  GQ G  S +DE++P  V  L+G ++  +A G  HT+  + S G +YAFG  
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 380 QFGQLGTG 387
             GQLGTG
Sbjct: 323 ARGQLGTG 330



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 118/255 (46%), Gaps = 38/255 (14%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  VA GG H++ L + G+V+  G   +GQLG     R  + P  I  +           
Sbjct: 36  VKEVACGGNHSVFLLEGGEVYTCGLNTKGQLG---HEREGNKPEQIGALAD--------- 83

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                             ++  +ACG  HS  ++D G L ++G G  GQ G  +T+D ++
Sbjct: 84  -----------------QHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLTTTEDSVA 126

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD-QAETLPRLLDA 400
            P  +  L    I  V+ G WH + +++DG  + +G N  GQLG G +  ++  P+    
Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQ--RV 184

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI---EGC 457
            SLE +    V+ G  H+  ++  G VF WG N  GQLGL D  DR  P  V +   +  
Sbjct: 185 RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKV 244

Query: 458 VPRNVACGWWHTLLL 472
           V   ++CG  HT +L
Sbjct: 245 V--YISCGEEHTAVL 257



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 92/369 (24%), Positives = 143/369 (38%), Gaps = 79/369 (21%)

Query: 39  PLTVGS-AWRDVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLP 95
           P  +G+ A + +    CG   ++A+SD  +L +WG+  D      T+     +P      
Sbjct: 75  PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLTTTEDSVAVPRLIQKL 134

Query: 96  TEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFL 155
            + +I++ + G  HC+A+   G+ +TWG           G L    GL K+         
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWG-------KNSHGQL----GLGKE--------F 175

Query: 156 TEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLA-------KQTAESSSSGDENL 208
             Q SP  Q  RS  G        G    G+    +SL+          A      DE  
Sbjct: 176 PSQASP--QRVRSLEGIPLAQVAAG----GAHSFALSLSGAVFGWGMNNAGQLGLSDEKD 229

Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
              PC V L    ++  ++ G  HT  L+  G V+ +G G  GQLG  S   M    +P 
Sbjct: 230 RESPCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGSCGQLGHDS---MNDEVNPR 286

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHS-AVITDAGALLTFGWG 327
             +E                        + G+ V  IACG +H+ A +  +G +  FG G
Sbjct: 287 RVLE------------------------LMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLG 385
             GQ G G T +   P+ V             G W  H+  +S+  D + +  +   Q+ 
Sbjct: 323 ARGQLGTGHTCNVKCPSPVK------------GYWAAHSGQLSARPDRFKY--HIVKQIF 368

Query: 386 TGGDQAETL 394
           +GGDQ   L
Sbjct: 369 SGGDQTFVL 377



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 10/124 (8%)

Query: 354 IEGVAAGLWHTICISSDGDVYAFGGNQFGQLG--TGGDQAETLPRLLDAPSLENVHSKSV 411
           ++ VA G  H++ +   G+VY  G N  GQLG    G++ E +  L D       H   V
Sbjct: 36  VKEVACGGNHSVFLLEGGEVYTCGLNTKGQLGHEREGNKPEQIGALADQ------HIIHV 89

Query: 412 SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR-NIPSQV-TIEGCVPRNVACGWWHT 469
           +CG  H+  ++D G++F WG    GQLGL    D   +P  +  +       V+CG WH 
Sbjct: 90  ACGESHSLALSDRGQLFSWGAGSDGQLGLTTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149

Query: 470 LLLA 473
           L LA
Sbjct: 150 LALA 153


>gi|428185814|gb|EKX54666.1| hypothetical protein GUITHDRAFT_40316, partial [Guillardia theta
           CCMP2712]
          Length = 272

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 80/245 (32%), Positives = 116/245 (47%), Gaps = 31/245 (12%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS----SPHPIPCIESSYG 276
           +R+  +A G  H++ LSD G+V+ WG    GQLG G    + S    +     C++ + G
Sbjct: 33  LRVEDMACGSAHSVILSD-GKVFTWGQNKHGQLGHGPSDYLGSLGPTAKTDGKCVQVAAG 91

Query: 277 KDRSAALS-RGSVNSEGPG---------------------FRVPGNYVKGIACGGRHSAV 314
            + S AL+ RG +   G G                       VPG  V  I CG RH A 
Sbjct: 92  YNFSMALTDRGEIFVFGEGRHGVLAQGDELSKSSPQVIDSLSVPGYVVDKIFCGERHCAC 151

Query: 315 ITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVY 374
           I   G  LT+G G  GQ G  S DDE  P  V  L  + +  ++ G  HT  ++SD  +Y
Sbjct: 152 IVRYGQALTWGCGSDGQLGHSSRDDEHFPRKVEHLANVSVRTISCGSKHTCFLTSDNSLY 211

Query: 375 AFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNK 434
             G  + G+LG G +++   P+ ++  +L+ V  K VSCG  HTA I     ++ +G   
Sbjct: 212 TCGNGKDGKLGHGDERSYLYPKKVE--TLQAV--KEVSCGDYHTACIDGKSIIYTFGSGT 267

Query: 435 YGQLG 439
            GQLG
Sbjct: 268 RGQLG 272



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 88/175 (50%), Gaps = 7/175 (4%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD--DELSPNCVSSLLGIQIEGVAA 359
           V+ +ACG  HS +++D G + T+G   +GQ G G +D    L P   +    +Q   VAA
Sbjct: 35  VEDMACGSAHSVILSD-GKVFTWGQNKHGQLGHGPSDYLGSLGPTAKTDGKCVQ---VAA 90

Query: 360 GLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
           G   ++ ++  G+++ FG  + G L  G + +++ P+++D+ S+       + CG RH A
Sbjct: 91  GYNFSMALTDRGEIFVFGEGRHGVLAQGDELSKSSPQVIDSLSVPGYVVDKIFCGERHCA 150

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLA 473
            I   G+   WG    GQLG     D + P +V  +     R ++CG  HT  L 
Sbjct: 151 CIVRYGQALTWGCGSDGQLGHSSRDDEHFPRKVEHLANVSVRTISCGSKHTCFLT 205



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 81/330 (24%), Positives = 129/330 (39%), Gaps = 67/330 (20%)

Query: 65  KLITWGSTDDLGQSYVTSGKHG----EIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVY 120
           KL+ WG  +D GQ  V+         ++ + F L  E      A G AH V +++G +V+
Sbjct: 1   KLVAWGD-NDFGQLGVSEQMMNHSLTDVQQTFDLRVE----DMACGSAHSVILSDG-KVF 54

Query: 121 TWGWKECVPSGR----VFGDLSTGTGLDKDVFERQSSF-LTEQVSPRSQVSRSSGGTSSG 175
           TWG  +    G       G L      D    +  + +  +  ++ R ++          
Sbjct: 55  TWGQNKHGQLGHGPSDYLGSLGPTAKTDGKCVQVAAGYNFSMALTDRGEIFVF------- 107

Query: 176 TDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLA 235
               G G  G     ++   + ++SS    ++LS         PG  +  +  G RH   
Sbjct: 108 ----GEGRHGV----LAQGDELSKSSPQVIDSLSV--------PGYVVDKIFCGERHCAC 151

Query: 236 LSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF 295
           +   GQ   WG G +GQLG  SR             +  +   +   L+  SV +     
Sbjct: 152 IVRYGQALTWGCGSDGQLGHSSR-------------DDEHFPRKVEHLANVSVRT----- 193

Query: 296 RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
                    I+CG +H+  +T   +L T G G  G+ G G     L P  V +L  ++  
Sbjct: 194 ---------ISCGSKHTCFLTSDNSLYTCGNGKDGKLGHGDERSYLYPKKVETLQAVK-- 242

Query: 356 GVAAGLWHTICISSDGDVYAFGGNQFGQLG 385
            V+ G +HT CI     +Y FG    GQLG
Sbjct: 243 EVSCGDYHTACIDGKSIIYTFGSGTRGQLG 272


>gi|428173156|gb|EKX42060.1| hypothetical protein GUITHDRAFT_95823 [Guillardia theta CCMP2712]
          Length = 546

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 122/279 (43%), Gaps = 39/279 (13%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           V  + ++ G  H  A++D G V+ WG G  GQLG G  +  +  P P+P I+       +
Sbjct: 273 VVFSALSFGAGHCAAVTDTGLVYTWGQGRYGQLGHGDDVDKII-PQPVPRIKGEVKSVSA 331

Query: 281 AALSRGSVNSEGPGFR------------------VP---------GNYVKGIACGGRHSA 313
                 +V   G  F                   +P         G  V     GG H+ 
Sbjct: 332 GFYHTVAVTHHGALFTWGDGKEGKLGHNDNAQRLIPTLVAAFIEWGMPVAAAQAGGSHTL 391

Query: 314 VITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDV 373
           V+   G + +FG G  G+ G G+ +D+ SP  +S+L   +   +AAG  H++ ++  G +
Sbjct: 392 VLNRRGQVFSFGSGDSGRLGHGNDNDQWSPTFLSALESERCVSIAAGFAHSVALTDQGQI 451

Query: 374 YAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWN 433
           Y +G  + G+LG G D  E LPR L   S + + + +V+ G  HT +   +G +   G  
Sbjct: 452 YTWGCGKLGRLGHGSDSDEVLPRKLALISHDTIKAIAVAAGEAHTCIFRSEGSLITLGRV 511

Query: 434 KYGQLGLG----DVIDRNIPSQVTIEGCVPRNVACGWWH 468
            +G++  G    D++D       T+   + R  +  W H
Sbjct: 512 SHGRMAEGSCAQDMLD-------TLHTAISRQSSNDWHH 543



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 91/172 (52%), Gaps = 6/172 (3%)

Query: 304 GIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWH 363
            ++ G  H A +TD G + T+G G YGQ G G   D++ P  V  + G +++ V+AG +H
Sbjct: 277 ALSFGAGHCAAVTDTGLVYTWGQGRYGQLGHGDDVDKIIPQPVPRIKG-EVKSVSAGFYH 335

Query: 364 TICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
           T+ ++  G ++ +G  + G+LG   +    +P L+ A     +   +   G  HT V+  
Sbjct: 336 TVAVTHHGALFTWGDGKEGKLGHNDNAQRLIPTLVAAFIEWGMPVAAAQAGGSHTLVLNR 395

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIP---SQVTIEGCVPRNVACGWWHTLLL 472
            G+VF +G    G+LG G+  D+  P   S +  E CV  ++A G+ H++ L
Sbjct: 396 RGQVFSFGSGDSGRLGHGNDNDQWSPTFLSALESERCV--SIAAGFAHSVAL 445



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 96/359 (26%), Positives = 143/359 (39%), Gaps = 59/359 (16%)

Query: 58  MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAA------GWAHCV 111
           + I+ S +++  G T + G++ + S     I +        S+++         G  HC 
Sbjct: 227 LTITKSCQVLVGGLTLEAGKTVLQSASFNSIKKHRVTRAGLSLLRRVVFSALSFGAGHCA 286

Query: 112 AVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG 171
           AVT+ G VYTWG       GR +G L  G  +DK + +       E  S  +    +   
Sbjct: 287 AVTDTGLVYTWG------QGR-YGQLGHGDDVDKIIPQPVPRIKGEVKSVSAGFYHTVAV 339

Query: 172 TSSGTDGR-GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVT--LNPGVRIATVAA 228
           T  G     G G+EG                   D      P LV   +  G+ +A   A
Sbjct: 340 THHGALFTWGDGKEGKL--------------GHNDNAQRLIPTLVAAFIEWGMPVAAAQA 385

Query: 229 GGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSV 288
           GG HTL L+  GQV+ +G G  G+LG G+     S     P   S+   +R  +      
Sbjct: 386 GGSHTLVLNRRGQVFSFGSGDSGRLGHGNDNDQWS-----PTFLSALESERCVS------ 434

Query: 289 NSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVS- 347
                           IA G  HS  +TD G + T+G G  G+ G GS  DE+ P  ++ 
Sbjct: 435 ----------------IAAGFAHSVALTDQGQIYTWGCGKLGRLGHGSDSDEVLPRKLAL 478

Query: 348 -SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLEN 405
            S   I+   VAAG  HT    S+G +   G    G++  G    + L  L  A S ++
Sbjct: 479 ISHDTIKAIAVAAGEAHTCIFRSEGSLITLGRVSHGRMAEGSCAQDMLDTLHTAISRQS 537



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 127/304 (41%), Gaps = 74/304 (24%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGE-----IPEPFPLPTEASIVKAAAGW 107
           G G   A++D+  + TW      GQ       HG+     IP+P P   +  +   +AG+
Sbjct: 281 GAGHCAAVTDTGLVYTW------GQGRYGQLGHGDDVDKIIPQPVPR-IKGEVKSVSAGF 333

Query: 108 AHCVAVTEGGEVYTWG-WKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVS 166
            H VAVT  G ++TWG  KE        G L       + +    ++F+ E   P +  +
Sbjct: 334 YHTVAVTHHGALFTWGDGKE--------GKLGHNDNAQRLIPTLVAAFI-EWGMPVA--A 382

Query: 167 RSSGGTSSGTDGR-------GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
             +GG+ +    R       GSG+ G    R+            G++N    P  ++   
Sbjct: 383 AQAGGSHTLVLNRRGQVFSFGSGDSG----RL----------GHGNDNDQWSPTFLSALE 428

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
             R  ++AAG  H++AL+D GQ++ WG G  G+LG GS      S   +P         R
Sbjct: 429 SERCVSIAAGFAHSVALTDQGQIYTWGCGKLGRLGHGS-----DSDEVLP---------R 474

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGI--ACGGRHSAVITDAGALLTFGWGLYGQCGQGST 337
             AL             +  + +K I  A G  H+ +    G+L+T G   +G+  +GS 
Sbjct: 475 KLAL-------------ISHDTIKAIAVAAGEAHTCIFRSEGSLITLGRVSHGRMAEGSC 521

Query: 338 DDEL 341
             ++
Sbjct: 522 AQDM 525



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 2/69 (2%)

Query: 403 LENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRN 461
           L  V   ++S GA H A + D G V+ WG  +YGQLG GD +D+ IP  V  I+G V ++
Sbjct: 270 LRRVVFSALSFGAGHCAAVTDTGLVYTWGQGRYGQLGHGDDVDKIIPQPVPRIKGEV-KS 328

Query: 462 VACGWWHTL 470
           V+ G++HT+
Sbjct: 329 VSAGFYHTV 337


>gi|74140658|dbj|BAB30628.3| unnamed protein product [Mus musculus]
          Length = 590

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 95/171 (55%), Gaps = 4/171 (2%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           ++CG  H+A++T    L  FG   +GQ G GS    + P C+ +L   +++  A G  HT
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 137

Query: 365 ICISSDGDVYAFGGNQFGQLGTGG-DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
           +  +  G VYA GGN  GQLG G  D  +T  +++     + +  K +S GA  +A + +
Sbjct: 138 LVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTI--KQLSAGANTSAALTE 195

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAV 474
           DGK+F WG N  GQ+GL D  +  IP +VT+ G     ++CG++H+  + +
Sbjct: 196 DGKLFMWGDNSEGQIGLEDKSNVCIPHEVTV-GKPISWISCGYYHSAFVTM 245



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 139/298 (46%), Gaps = 45/298 (15%)

Query: 213 CLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR-----IRMVSSPHP 267
           C+  L P  ++   A G  HTL  +D G V+  G   EGQLGLG          +    P
Sbjct: 118 CIKALKPE-KVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTP 176

Query: 268 IPCIES-SYGKDRSAALSRGSV------NSEG------------PGFRVPGNYVKGIACG 308
              I+  S G + SAAL+          NSEG            P     G  +  I+CG
Sbjct: 177 ADTIKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISWISCG 236

Query: 309 GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVS--SLLGI--QIEGVAAGLWHT 364
             HSA +T  G L TFG    G+ G     +EL  N  S   +LGI  ++  VA G  HT
Sbjct: 237 YYHSAFVTMDGELYTFGEPENGKLG---LPNELLMNHRSPQRVLGIPERVIQVACGGGHT 293

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAET-LPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
           + ++ +  VYAFG  QFGQLG G    ET  P++++   +++     +SCG  HTA++ +
Sbjct: 294 VVLT-EKVVYAFGLGQFGQLGLGTFLFETSEPKIIE--RIKDQKICHISCGENHTALMTE 350

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC------VPRNVACGWWHTLLLAVP 475
            G ++ +G  ++G+LGLG     N  +Q     C        + +ACG  H L+ A P
Sbjct: 351 LGLLYTFGDGRHGKLGLG---MENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVFATP 405



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 111/254 (43%), Gaps = 40/254 (15%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
           ++ G  HT  ++   +++ +G    GQLGLGS+  ++       CI++            
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKP----TCIKA------------ 121

Query: 286 GSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNC 345
                      +    VK  ACG  H+ V TD G +   G    GQ G G TDD  + + 
Sbjct: 122 -----------LKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQ 170

Query: 346 VSSLL-GIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLE 404
           +        I+ ++AG   +  ++ DG ++ +G N  GQ+G        +P        E
Sbjct: 171 IVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPH-------E 223

Query: 405 NVHSKS---VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPR- 460
               K    +SCG  H+A +  DG+++ +G  + G+LGL + +  N  S   + G   R 
Sbjct: 224 VTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERV 283

Query: 461 -NVACGWWHTLLLA 473
             VACG  HT++L 
Sbjct: 284 IQVACGGGHTVVLT 297



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 83/198 (41%), Gaps = 56/198 (28%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
           R+  VA GG HT+ L++   V+ +G G  GQLGLG+ +   S P  I             
Sbjct: 282 RVIQVACGGGHTVVLTE-KVVYAFGLGQFGQLGLGTFLFETSEPKIIE------------ 328

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD--D 339
                         R+    +  I+CG  H+A++T+ G L TFG G +G+ G G  +  +
Sbjct: 329 --------------RIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTN 374

Query: 340 ELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL-- 397
           +  P   S+ L   ++ +A G  H +  ++                         PRL  
Sbjct: 375 QFFPTLCSNFLRFAVQLIACGGCHMLVFAT-------------------------PRLGT 409

Query: 398 LDAPSLENVHSKSVSCGA 415
           +D P  E+V+   +S G+
Sbjct: 410 IDEPKFEDVYEPYISTGS 427


>gi|403263478|ref|XP_003924058.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Saimiri
           boliviensis boliviensis]
          Length = 1050

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 140/308 (45%), Gaps = 51/308 (16%)

Query: 84  KHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGL 143
           + G  PE      +  I+  A G +H +A+++ G++++WG      +G   G L   T  
Sbjct: 70  REGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG------AGSD-GQLGLMTTE 122

Query: 144 DKDVFERQSSFLTEQVSPRSQVSRSSGG---TSSGTDGRGSGEEGSKRRRISLAKQTAES 200
           D     R    L ++++ ++ +  S G     +   DG+      +   ++ L K+    
Sbjct: 123 DSVAVPR----LIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 201 SSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR 260
           +S         P  V    G+ +A VAAGG H+ ALS  G V+GWG    GQLGL     
Sbjct: 179 AS---------PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE-- 227

Query: 261 MVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA 320
                           KDR +      + ++          V  I+CG  H+AV+T +G 
Sbjct: 228 ----------------KDRESPCHVKLLRTQK---------VVYISCGEEHTAVLTKSGG 262

Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFGGN 379
           + TFG G  GQ G  S +DE++P  V  L+G ++  +A G  HT+  + S G +YAFG  
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 380 QFGQLGTG 387
             GQLGTG
Sbjct: 323 ARGQLGTG 330



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 112/251 (44%), Gaps = 30/251 (11%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
            I  VA G  H+LALSD GQ++ WG G +GQLGL +    V+ P  I             
Sbjct: 85  HIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ------------ 132

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDE 340
                         ++    +  ++CG  H   +   G   T+G   +GQ G G     +
Sbjct: 133 --------------KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
            SP  V SL GI +  VAAG  H+  +S  G V+ +G N  GQLG   ++    P  +  
Sbjct: 179 ASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKL 238

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVP 459
              + V    +SCG  HTAV+   G VF +G    GQLG   + D   P +V  + G   
Sbjct: 239 LRTQKV--VYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEV 296

Query: 460 RNVACGWWHTL 470
             +ACG  HTL
Sbjct: 297 TQIACGRQHTL 307



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 118/255 (46%), Gaps = 38/255 (14%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  VA GG H++ L + G+V+  G   +GQLG     R  + P  I  +           
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG---HEREGNKPEQIGALAD--------- 83

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                             ++  +ACG  HS  ++D G L ++G G  GQ G  +T+D ++
Sbjct: 84  -----------------QHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA 126

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD-QAETLPRLLDA 400
            P  +  L    I  V+ G WH + +++DG  + +G N  GQLG G +  ++  P+    
Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQ--RV 184

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI---EGC 457
            SLE +    V+ G  H+  ++  G VF WG N  GQLGL D  DR  P  V +   +  
Sbjct: 185 RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKV 244

Query: 458 VPRNVACGWWHTLLL 472
           V   ++CG  HT +L
Sbjct: 245 V--YISCGEEHTAVL 257



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 98/399 (24%), Positives = 159/399 (39%), Gaps = 81/399 (20%)

Query: 39  PLTVGS-AWRDVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLP 95
           P  +G+ A + +    CG   ++A+SD  +L +WG+  D     +T+     +P      
Sbjct: 75  PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 96  TEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFL 155
            + +I++ + G  HC+A+   G+ +TWG           G L    GL K+         
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWG-------KNSHGQL----GLGKE--------F 175

Query: 156 TEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLA-------KQTAESSSSGDENL 208
             Q SP  Q  RS  G        G    G+    +SL+          A      DE  
Sbjct: 176 PSQASP--QRVRSLEGIPLAQVAAG----GAHSFALSLSGAVFGWGMNNAGQLGLSDEKD 229

Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
              PC V L    ++  ++ G  HT  L+  G V+ +G G  GQLG  S   M    +P 
Sbjct: 230 RESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDS---MNDEVNPR 286

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHS-AVITDAGALLTFGWG 327
             +E                        + G+ V  IACG +H+ A +  +G +  FG G
Sbjct: 287 RVLE------------------------LMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLG 385
             GQ G G T +   P+ V             G W  H+  +++  D + +  +   Q+ 
Sbjct: 323 ARGQLGTGHTCNVKCPSPVK------------GYWAAHSGQLTARADRFKY--HIVKQIF 368

Query: 386 TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           +GGDQ   L    +  S   V  ++V+  A +T++I D+
Sbjct: 369 SGGDQTFVLCSKYENSS-PAVDFRTVN-QAHYTSLINDE 405



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 62/124 (50%), Gaps = 10/124 (8%)

Query: 354 IEGVAAGLWHTICISSDGDVYAFGGNQFGQLG--TGGDQAETLPRLLDAPSLENVHSKSV 411
           ++ VA G  H++ +  DG+VY  G N  GQLG    G++ E +  L D       H   V
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQIGALADQ------HIIHV 89

Query: 412 SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR-NIPSQV-TIEGCVPRNVACGWWHT 469
           +CG  H+  ++D G++F WG    GQLGL    D   +P  +  +       V+CG WH 
Sbjct: 90  ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149

Query: 470 LLLA 473
           L LA
Sbjct: 150 LALA 153


>gi|403263469|ref|XP_003924054.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
           [Saimiri boliviensis boliviensis]
          Length = 988

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 119/253 (47%), Gaps = 30/253 (11%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++   V+ G  H+LA+   G+V+ WG G EGQLG+G    +  +P  I  +         
Sbjct: 75  LKFDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEINFTPRKITTLN-------- 126

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DD 339
                             G  +  ++CG  HS  ++    + ++G   +GQ G G     
Sbjct: 127 ------------------GIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPS 168

Query: 340 ELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLP-RLL 398
           + SP  V SL GI +  VAAG  H+  +S  G  + +G N  GQL   G   +    + L
Sbjct: 169 QPSPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPL 228

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGC 457
              +L+N+    +SCG  HTAV++ DGKVF +G N  GQLG     ++  P  V  I+G 
Sbjct: 229 SIGALKNLGVIYISCGDEHTAVLSQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDGL 288

Query: 458 VPRNVACGWWHTL 470
           V + + CG  HT+
Sbjct: 289 VSQ-IDCGGDHTI 300



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 103/227 (45%), Gaps = 44/227 (19%)

Query: 214 LVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES 273
           + TLN G++I  V+ G  H+LALS   QV+ WG    GQLGLG       SP  +  +E 
Sbjct: 122 ITTLN-GIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQPSPQRVRSLE- 179

Query: 274 SYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWG------ 327
                                    G  +  +A GG HS  ++  G   +FGWG      
Sbjct: 180 -------------------------GIPLAQVAAGGAHSFALSLCGT--SFGWGSNSAGQ 212

Query: 328 --LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLG 385
             L G+  Q  ++  LS   + +L  + +  ++ G  HT  +S DG V+ FG N  GQLG
Sbjct: 213 LALSGRNVQVQSNKPLS---IGALKNLGVIYISCGDEHTAVLSQDGKVFTFGDNSSGQLG 269

Query: 386 TGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
                 +  P+L++   ++ + S+ + CG  HT A +   G+V  +G
Sbjct: 270 YSPTPEKRGPQLVE--RIDGLVSQ-IDCGGDHTIAYVHTTGQVVSFG 313



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 87/184 (47%), Gaps = 13/184 (7%)

Query: 298 PGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGV 357
           PG  +   A G RH+ ++     + + G    GQ G+        P  V +L  ++ + V
Sbjct: 21  PGAELLQAASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDLPEPVQALKTLKFDLV 80

Query: 358 AAGLWHTICISSDGDVYAFGGNQFGQLGTGG-DQAETLPRLLDAPSLENVHSKSVSCGAR 416
           + G  H++ +   G V+A+G    GQLG G   +    PR +   +L  +    VSCG  
Sbjct: 81  SCGKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEINFTPRKIT--TLNGIKIIQVSCGHY 138

Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ------VTIEGCVPRNVACGWWHTL 470
           H+  ++ D +VF WG N +GQLGLG    +  PSQ       ++EG     VA G  H+ 
Sbjct: 139 HSLALSKDSQVFSWGKNSHGQLGLG----KEFPSQPSPQRVRSLEGIPLAQVAAGGAHSF 194

Query: 471 LLAV 474
            L++
Sbjct: 195 ALSL 198


>gi|405954062|gb|EKC21598.1| Putative E3 ubiquitin-protein ligase HERC4 [Crassostrea gigas]
          Length = 1059

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 77/259 (29%), Positives = 118/259 (45%), Gaps = 29/259 (11%)

Query: 214 LVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES 273
           LV+    +++   A G   +L ++  G+V+ WG   +GQLG G               + 
Sbjct: 86  LVSSLSSMQVIQAAGGSEFSLVITTAGEVFSWGRNDKGQLGRG---------------KL 130

Query: 274 SYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCG 333
           S  ++R   L +           +    V  I CG  H   +TD G L ++G   YGQ G
Sbjct: 131 SKEEERKPKLMKS----------LAVCTVVQITCGANHCLALTDDGRLFSWGCNKYGQLG 180

Query: 334 QGSTDD-ELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAE 392
            GS+     +P  +  L GI I  +A+G  H+  ++    V+ +G N FGQLG   +  +
Sbjct: 181 LGSSHSFHDTPQQIVCLRGIPIAQIASGGNHSFILTWSRAVFGWGKNSFGQLGLNDEYDK 240

Query: 393 TLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
           + P L    SL N     +SCG  HT  +  +G VF +G   +GQLG     +  +P +V
Sbjct: 241 SHPTL--CKSLRNQKVMYISCGEDHTVALTKEGGVFSFGAGGFGQLGHNSTQNEILPKRV 298

Query: 453 T-IEGCVPRNVACGWWHTL 470
             + G V   VACG  HT+
Sbjct: 299 MELMGSVISQVACGRRHTV 317



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 115/402 (28%), Positives = 169/402 (42%), Gaps = 81/402 (20%)

Query: 69  WGSTDDLGQSYVTSGKHGEI--PEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKE 126
           WG ++D GQ  +   +   I  P+      E  I + + G  H + VT+ G++Y+ G  E
Sbjct: 7   WGRSND-GQLSIGFSEETSILSPKEVSRLQELDIKEISCGEKHTLIVTKDGKLYSCGSNE 65

Query: 127 CVPSGRVFGDL----STGTGLDKDVFERQSSFLTEQV------SPRSQVSRSSGGTSS-- 174
                  +G+L         +  DV E  SS  + QV      S  S V  ++G   S  
Sbjct: 66  -------YGELGHSKPRSRAVSIDVVELVSSLSSMQVIQAAGGSEFSLVITTAGEVFSWG 118

Query: 175 ----GTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGG 230
               G  GRG   +  +R+                      P L+       +  +  G 
Sbjct: 119 RNDKGQLGRGKLSKEEERK----------------------PKLMKSLAVCTVVQITCGA 156

Query: 231 RHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNS 290
            H LAL+D G+++ WG    GQLGLGS      +P  I C+             RG    
Sbjct: 157 NHCLALTDDGRLFSWGCNKYGQLGLGSSHSFHDTPQQIVCL-------------RG---- 199

Query: 291 EGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTDDELSPNCVSS 348
                 +P   +  IA GG HS ++T + A+  FGWG   +GQ G     D+  P    S
Sbjct: 200 ------IP---IAQIASGGNHSFILTWSRAV--FGWGKNSFGQLGLNDEYDKSHPTLCKS 248

Query: 349 LLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHS 408
           L   ++  ++ G  HT+ ++ +G V++FG   FGQLG    Q E LP+      L     
Sbjct: 249 LRNQKVMYISCGEDHTVALTKEGGVFSFGAGGFGQLGHNSTQNEILPK--RVMELMGSVI 306

Query: 409 KSVSCGARHTAVIA-DDGKVFCWGWNKYGQLGLGDVIDRNIP 449
             V+CG RHT   +   GK++ +G    GQLGLGD   RN P
Sbjct: 307 SQVACGRRHTVAFSPSSGKMYAFGSGGSGQLGLGDTSARNSP 348



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 114/240 (47%), Gaps = 35/240 (14%)

Query: 242 VWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNY 301
           V+GWG   +GQL +G                     + ++ LS   V+      R+    
Sbjct: 4   VFGWGRSNDGQLSIGF-------------------SEETSILSPKEVS------RLQELD 38

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSP----NCVSSLLGIQIEGV 357
           +K I+CG +H+ ++T  G L + G   YG+ G                VSSL  +Q+   
Sbjct: 39  IKEISCGEKHTLIVTKDGKLYSCGSNEYGELGHSKPRSRAVSIDVVELVSSLSSMQVIQA 98

Query: 358 AAGLWHTICISSDGDVYAFGGNQFGQLGTG--GDQAETLPRLLDAPSLENVHSKSVSCGA 415
           A G   ++ I++ G+V+++G N  GQLG G    + E  P+L+ + ++  V    ++CGA
Sbjct: 99  AGGSEFSLVITTAGEVFSWGRNDKGQLGRGKLSKEEERKPKLMKSLAVCTV--VQITCGA 156

Query: 416 RHTAVIADDGKVFCWGWNKYGQLGLGDVID-RNIPSQVT-IEGCVPRNVACGWWHTLLLA 473
            H   + DDG++F WG NKYGQLGLG      + P Q+  + G     +A G  H+ +L 
Sbjct: 157 NHCLALTDDGRLFSWGCNKYGQLGLGSSHSFHDTPQQIVCLRGIPIAQIASGGNHSFILT 216



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 100/233 (42%), Gaps = 21/233 (9%)

Query: 27  RSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGK 84
           RS  +S  VV L  ++ S       GG  F++ I+ + ++ +WG  D   LG+  ++  +
Sbjct: 75  RSRAVSIDVVELVSSLSSMQVIQAAGGSEFSLVITTAGEVFSWGRNDKGQLGRGKLSKEE 134

Query: 85  HGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLD 144
             + P+        ++V+   G  HC+A+T+ G +++WG   C   G++      G G  
Sbjct: 135 ERK-PKLMKSLAVCTVVQITCGANHCLALTDDGRLFSWG---CNKYGQL------GLGSS 184

Query: 145 KDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSG 204
               +     +  +  P +Q+  +SGG  S             R      K +       
Sbjct: 185 HSFHDTPQQIVCLRGIPIAQI--ASGGNHSFILTWS-------RAVFGWGKNSFGQLGLN 235

Query: 205 DENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS 257
           DE   + P L       ++  ++ G  HT+AL+  G V+ +G GG GQLG  S
Sbjct: 236 DEYDKSHPTLCKSLRNQKVMYISCGEDHTVALTKEGGVFSFGAGGFGQLGHNS 288


>gi|296196017|ref|XP_002745644.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
           [Callithrix jacchus]
          Length = 1050

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 140/308 (45%), Gaps = 51/308 (16%)

Query: 84  KHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGL 143
           + G  PE      +  I+  A G +H +A+++ G++++WG      +G   G L   T  
Sbjct: 70  REGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG------AGSD-GQLGLMTTE 122

Query: 144 DKDVFERQSSFLTEQVSPRSQVSRSSGG---TSSGTDGRGSGEEGSKRRRISLAKQTAES 200
           D     R    L ++++ ++ +  S G     +   DG+      +   ++ L K+    
Sbjct: 123 DSVAVPR----LIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 201 SSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR 260
           +S         P  V    G+ +A VAAGG H+ ALS  G V+GWG    GQLGL     
Sbjct: 179 AS---------PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE-- 227

Query: 261 MVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA 320
                           KDR +      + ++          V  I+CG  H+AV+T +G 
Sbjct: 228 ----------------KDRESPCHVKLLRTQK---------VVYISCGEEHTAVLTKSGG 262

Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFGGN 379
           + TFG G  GQ G  S +DE++P  V  L+G ++  +A G  HT+  + S G +YAFG  
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 380 QFGQLGTG 387
             GQLGTG
Sbjct: 323 ARGQLGTG 330



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 112/251 (44%), Gaps = 30/251 (11%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
            I  VA G  H+LALSD GQ++ WG G +GQLGL +    V+ P  I             
Sbjct: 85  HIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ------------ 132

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDE 340
                         ++    +  ++CG  H   +   G   T+G   +GQ G G     +
Sbjct: 133 --------------KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
            SP  V SL GI +  VAAG  H+  +S  G V+ +G N  GQLG   ++    P  +  
Sbjct: 179 ASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKL 238

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVP 459
              + V    +SCG  HTAV+   G VF +G    GQLG   + D   P +V  + G   
Sbjct: 239 LRTQKV--VYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEV 296

Query: 460 RNVACGWWHTL 470
             +ACG  HTL
Sbjct: 297 TQIACGRQHTL 307



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 118/255 (46%), Gaps = 38/255 (14%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  VA GG H++ L + G+V+  G   +GQLG     R  + P  I  +           
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG---HEREGNKPEQIGALAD--------- 83

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                             ++  +ACG  HS  ++D G L ++G G  GQ G  +T+D ++
Sbjct: 84  -----------------QHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA 126

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD-QAETLPRLLDA 400
            P  +  L    I  V+ G WH + +++DG  + +G N  GQLG G +  ++  P+    
Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQ--RV 184

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI---EGC 457
            SLE +    V+ G  H+  ++  G VF WG N  GQLGL D  DR  P  V +   +  
Sbjct: 185 RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKV 244

Query: 458 VPRNVACGWWHTLLL 472
           V   ++CG  HT +L
Sbjct: 245 V--YISCGEEHTAVL 257



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 91/369 (24%), Positives = 144/369 (39%), Gaps = 79/369 (21%)

Query: 39  PLTVGS-AWRDVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLP 95
           P  +G+ A + +    CG   ++A+SD  +L +WG+  D     +T+     +P      
Sbjct: 75  PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 96  TEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFL 155
            + +I++ + G  HC+A+   G+ +TWG           G L    GL K+         
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWG-------KNSHGQL----GLGKE--------F 175

Query: 156 TEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLA-------KQTAESSSSGDENL 208
             Q SP  Q  RS  G        G    G+    +SL+          A      DE  
Sbjct: 176 PSQASP--QRVRSLEGIPLAQVAAG----GAHSFALSLSGAVFGWGMNNAGQLGLSDEKD 229

Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
              PC V L    ++  ++ G  HT  L+  G V+ +G G  GQLG  S   M    +P 
Sbjct: 230 RESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDS---MNDEVNPR 286

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHS-AVITDAGALLTFGWG 327
             +E                        + G+ V  IACG +H+ A +  +G +  FG G
Sbjct: 287 RVLE------------------------LMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLG 385
             GQ G G T +   P+ V             G W  H+  +++  D + +  +   Q+ 
Sbjct: 323 ARGQLGTGHTCNVKCPSPVK------------GYWAAHSGQLTARADRFKY--HIVKQIF 368

Query: 386 TGGDQAETL 394
           +GGDQ   L
Sbjct: 369 SGGDQTFVL 377



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 62/124 (50%), Gaps = 10/124 (8%)

Query: 354 IEGVAAGLWHTICISSDGDVYAFGGNQFGQLG--TGGDQAETLPRLLDAPSLENVHSKSV 411
           ++ VA G  H++ +  DG+VY  G N  GQLG    G++ E +  L D       H   V
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQIGALADQ------HIIHV 89

Query: 412 SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR-NIPSQV-TIEGCVPRNVACGWWHT 469
           +CG  H+  ++D G++F WG    GQLGL    D   +P  +  +       V+CG WH 
Sbjct: 90  ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149

Query: 470 LLLA 473
           L LA
Sbjct: 150 LALA 153


>gi|8131930|gb|AAF73141.1|AF148798_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
           familiaris]
          Length = 683

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 58/170 (34%), Positives = 92/170 (54%), Gaps = 2/170 (1%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           ++CG  H+AV+T    L  FG   +GQ G GS      P CV +L   +++  A G  HT
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT 99

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           +  +  G VYA GGN  GQLG G  +  +   L+   + +    K +S G+  +A + +D
Sbjct: 100 LVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQR-KIKQLSAGSNTSAALTED 158

Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAV 474
           G++F WG N  GQ+GL +V +  +P QVT+ G     ++CG++H+  +  
Sbjct: 159 GELFMWGDNSEGQIGLENVTNVCVPQQVTV-GKPISWISCGYYHSAFVTT 207



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 146/301 (48%), Gaps = 51/301 (16%)

Query: 213 CLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR--------IRMVSS 264
           C+  L P  ++   A G  HTL  ++ G+V+  G   EGQLGLG          I   +S
Sbjct: 80  CVKALKPE-KVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTS 138

Query: 265 PHPIPCIESSYGKDRSAALSR-GSV-----NSEG------------PGFRVPGNYVKGIA 306
              I  +  S G + SAAL+  G +     NSEG            P     G  +  I+
Sbjct: 139 QRKIKQL--SAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVGKPISWIS 196

Query: 307 CGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL-----SPNCVSSLLGIQIEGVAAGL 361
           CG  HSA +T  G L TFG     +CG+    ++L      P  V  + G  ++ VA G 
Sbjct: 197 CGYYHSAFVTTEGQLYTFGEP---ECGKLGLPNQLLVNHRMPQPVPGIPGKVVQ-VACGG 252

Query: 362 WHTICISSDGDVYAFGGNQFGQLGTGGDQAET-LPRLLDAPSLENVHSKSVS---CGARH 417
            HT+ ++    VY FG  QFGQLG G    ET +P+     ++E++  + +S   CG  H
Sbjct: 253 GHTVVLTEKA-VYTFGLGQFGQLGLGTFLFETSVPK-----AIEHIKDQKISFIACGENH 306

Query: 418 TAVIADDGKVFCWGWNKYGQLGLG--DVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLAV 474
           TA+I D G ++ +G  ++G+LGLG  +  ++ IP+  +     + + V+CG  HTL+ A 
Sbjct: 307 TALITDMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGGCHTLVFAT 366

Query: 475 P 475
           P
Sbjct: 367 P 367



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 92/331 (27%), Positives = 139/331 (41%), Gaps = 68/331 (20%)

Query: 103 AAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPR 162
           AA G  H +  TEGG+VY  G       G   G L  G   ++  F    SF T Q   +
Sbjct: 92  AACGRNHTLVSTEGGKVYAAG-------GNNEGQLGLGDTEERSTF-HLISFFTSQRKIK 143

Query: 163 SQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLN 218
              + S+   +   DG     G   EG                  G EN++       + 
Sbjct: 144 QLSAGSNTSAALTEDGELFMWGDNSEG----------------QIGLENVTNVCVPQQVT 187

Query: 219 PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI----RMVSSPHPIPCIESS 274
            G  I+ ++ G  H+  ++  GQ++ +G    G+LGL +++    RM   P P+P I   
Sbjct: 188 VGKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRM---PQPVPGI--- 241

Query: 275 YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
                                  PG  V+ +ACGG H+ V+T+  A+ TFG G +GQ G 
Sbjct: 242 -----------------------PGKVVQ-VACGGGHTVVLTEK-AVYTFGLGQFGQLGL 276

Query: 335 GSTDDELS-PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQA-- 391
           G+   E S P  +  +   +I  +A G  HT  I+  G +Y FG  + G+LG G + +  
Sbjct: 277 GTFLFETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLGLGLENSTN 336

Query: 392 ETLPRLLDAPSLENVHSKSVSCGARHTAVIA 422
           + +P L    +      + VSCG  HT V A
Sbjct: 337 QFIPTLCS--NFLRFIVQLVSCGGCHTLVFA 365



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 120/255 (47%), Gaps = 42/255 (16%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
           ++ G  HT  ++   +++ +G    GQLGLGS+   VS P    C+++            
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSK-STVSKP---TCVKA------------ 83

Query: 286 GSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNC 345
                      +    VK  ACG  H+ V T+ G +   G    GQ G G T++  + + 
Sbjct: 84  -----------LKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHL 132

Query: 346 VSSLLGI-QIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLE 404
           +S      +I+ ++AG   +  ++ DG+++ +G N  GQ+G        +P+ +      
Sbjct: 133 ISFFTSQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTV---- 188

Query: 405 NVHSKS---VSCGARHTAVIADDGKVFCWGWNKYGQLGLGD--VIDRNIPSQVT-IEGCV 458
               K    +SCG  H+A +  +G+++ +G  + G+LGL +  +++  +P  V  I G V
Sbjct: 189 ---GKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPGKV 245

Query: 459 PRNVACGWWHTLLLA 473
            + VACG  HT++L 
Sbjct: 246 VQ-VACGGGHTVVLT 259


>gi|302876126|ref|YP_003844759.1| chromosome condensation regulator RCC1 [Clostridium cellulovorans
           743B]
 gi|302578983|gb|ADL52995.1| regulator of chromosome condensation RCC1 [Clostridium
           cellulovorans 743B]
          Length = 852

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 119/249 (47%), Gaps = 40/249 (16%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
           V+AG   T+AL + G VW WG+   G LG G+                            
Sbjct: 40  VSAGNTTTIALKNDGTVWSWGFNQNGHLGDGT---------------------------- 71

Query: 286 GSVNSEGPGFRVPG-NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN 344
            + NS  P  +V G N +  I+ G  H   +   G + T+G G  G+ G G+     +P 
Sbjct: 72  -TSNSNSP-VQVKGLNGITAISAGWAHFVALKSDGTVWTWGVGYSGELGDGTNSLRTTPA 129

Query: 345 CVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLE 404
            ++ L GI    ++AG  HT+ + +DG ++++G NQ+GQLGTG      +P  L  P   
Sbjct: 130 PINGLTGI--TAISAGWNHTLALKADGTLWSWGQNQYGQLGTGNTTNSNIP--LQVPG-- 183

Query: 405 NVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVA 463
            +   S+S G  H+ VI +DG V+ WG N +GQLG G   +   P Q++ + G +  NV+
Sbjct: 184 QIGITSISSGGGHSLVIKNDGTVWSWGCNNFGQLGNGTNSNNPTPHQISGLNGII--NVS 241

Query: 464 CGWWHTLLL 472
            G  H+  L
Sbjct: 242 AGVIHSTAL 250



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 122/253 (48%), Gaps = 29/253 (11%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES--------- 273
           I  ++AG  H +AL   G VW WG G  G+LG G+   + ++P PI  +           
Sbjct: 87  ITAISAGWAHFVALKSDGTVWTWGVGYSGELGDGTN-SLRTTPAPINGLTGITAISAGWN 145

Query: 274 ------------SYGKDRSAALSRGSVNSEGPGFRVPGNY-VKGIACGGRHSAVITDAGA 320
                       S+G+++   L  G+  +     +VPG   +  I+ GG HS VI + G 
Sbjct: 146 HTLALKADGTLWSWGQNQYGQLGTGNTTNSNIPLQVPGQIGITSISSGGGHSLVIKNDGT 205

Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
           + ++G   +GQ G G+  +  +P+ +S L GI    V+AG+ H+  + SDG V+ +G N 
Sbjct: 206 VWSWGCNNFGQLGNGTNSNNPTPHQISGLNGII--NVSAGVIHSTALKSDGTVWNWGCNF 263

Query: 381 FGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL 440
            G+L  G      +P  + A  L  +   +++ G   ++ I  DG  + WG N YGQLG 
Sbjct: 264 RGELANGNKIDSYIP--VQANGLNGI--IAITAGWEFSSAIKSDGTFWVWGVNDYGQLGN 319

Query: 441 GDVIDRNIPSQVT 453
           G   D   P QV+
Sbjct: 320 GSKSDVTSPMQVS 332



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 76/219 (34%), Positives = 103/219 (47%), Gaps = 29/219 (13%)

Query: 203 SGDENLSAFPCLVTLNPG-VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +G+   S  P  V   PG + I ++++GG H+L + + G VW WG    GQLG G+    
Sbjct: 169 TGNTTNSNIPLQV---PGQIGITSISSGGGHSLVIKNDGTVWSWGCNNFGQLGNGTNSNN 225

Query: 262 VSSPHPIP----CIESSYGKDRSAAL-SRGSVNSEGPGFR--------------VPGNYV 302
             +PH I      I  S G   S AL S G+V + G  FR              V  N +
Sbjct: 226 -PTPHQISGLNGIINVSAGVIHSTALKSDGTVWNWGCNFRGELANGNKIDSYIPVQANGL 284

Query: 303 KGI---ACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAA 359
            GI     G   S+ I   G    +G   YGQ G GS  D  SP  VSSL GI    +  
Sbjct: 285 NGIIAITAGWEFSSAIKSDGTFWVWGVNDYGQLGNGSKSDVTSPMQVSSLSGI--TAIDT 342

Query: 360 GLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           G  +T+ + +DG+++AFG N +GQLG G     T P L+
Sbjct: 343 GATYTVALKTDGNIFAFGENTYGQLGNGTTTGSTTPELV 381



 Score = 40.4 bits (93), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 3/64 (4%)

Query: 410 SVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWH 468
           +VS G   T  + +DG V+ WG+N+ G LG G   + N P QV  + G     ++ GW H
Sbjct: 39  AVSAGNTTTIALKNDGTVWSWGFNQNGHLGDGTTSNSNSPVQVKGLNGITA--ISAGWAH 96

Query: 469 TLLL 472
            + L
Sbjct: 97  FVAL 100


>gi|392343043|ref|XP_003754780.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Rattus
           norvegicus]
          Length = 1035

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 139/298 (46%), Gaps = 45/298 (15%)

Query: 213 CLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLG-----SRIRMVSSPHP 267
           C+  L P  ++   A G  HTL  +D G V+  G   EGQLGLG          +    P
Sbjct: 118 CIKALKPE-KVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIGFFTP 176

Query: 268 IPCIES-SYGKDRSAALSRGSV------NSEG------------PGFRVPGNYVKGIACG 308
              I+  S G + SAAL+          NSEG            P     G  +  I+CG
Sbjct: 177 SDIIKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVTVGKPISWISCG 236

Query: 309 GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVS--SLLGI--QIEGVAAGLWHT 364
             HSA +T  G L TFG    G+ G     ++L  N  S   +LGI  ++  VA G  HT
Sbjct: 237 YYHSAFVTTDGELYTFGEPENGKLG---LPNQLLINHRSPQRVLGIPDKVIQVACGGGHT 293

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAET-LPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
           + + ++  VYAFG  QFGQLG G    ET  P+++D   +++     +SCG  HTA++ D
Sbjct: 294 VVL-TEKVVYAFGLGQFGQLGLGTFLFETSEPKIID--RIKDQKISHISCGENHTALMTD 350

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC------VPRNVACGWWHTLLLAVP 475
            G ++ +G  ++G+LGLG     N  +Q     C        + +ACG  H L+ A P
Sbjct: 351 IGLMYTFGDGRHGKLGLG---MENFTNQFFPTLCSNFLKFTVQLIACGGCHMLVFATP 405



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/172 (34%), Positives = 92/172 (53%), Gaps = 6/172 (3%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           ++CG  H+A++T    L  FG   +GQ G GS      P C+ +L   +++  A G  HT
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCIKALKPEKVKLAACGRNHT 137

Query: 365 ICISSDGDVYAFGGNQFGQLGTGG-DQAETLPRL-LDAPSLENVHSKSVSCGARHTAVIA 422
           +  +  G VYA GGN  GQLG G  D  +T  ++    PS      K +S GA  +A + 
Sbjct: 138 LVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIGFFTPS---DIIKQLSAGANTSAALT 194

Query: 423 DDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAV 474
           +DGK+F WG N  GQ+GL +  +  IP +VT+ G     ++CG++H+  +  
Sbjct: 195 EDGKLFMWGDNSEGQIGLKNKSNVCIPHEVTV-GKPISWISCGYYHSAFVTT 245



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 128/289 (44%), Gaps = 58/289 (20%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
           ++ G  HT  ++   +++ +G    GQLGLGS+   +S P  I  ++    K + AA  R
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSK-SAISKPTCIKALKPE--KVKLAACGR 134

Query: 286 GSV--------------NSEGP---------------GFRVPGNYVKGIACGGRHSAVIT 316
                            N+EG                GF  P + +K ++ G   SA +T
Sbjct: 135 NHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIGFFTPSDIIKQLSAGANTSAALT 194

Query: 317 DAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAF 376
           + G L  +G    GQ G  +  +   P+ V+  +G  I  ++ G +H+  +++DG++Y F
Sbjct: 195 EDGKLFMWGDNSEGQIGLKNKSNVCIPHEVT--VGKPISWISCGYYHSAFVTTDGELYTF 252

Query: 377 GGNQFGQLGTGGD---QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWN 433
           G  + G+LG          +  R+L  P         V+CG  HT V+  +  V+ +G  
Sbjct: 253 GEPENGKLGLPNQLLINHRSPQRVLGIPD----KVIQVACGGGHTVVLT-EKVVYAFGLG 307

Query: 434 KYGQLGLG---------DVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           ++GQLGLG          +IDR    +++       +++CG  HT L+ 
Sbjct: 308 QFGQLGLGTFLFETSEPKIIDRIKDQKIS-------HISCGENHTALMT 349


>gi|312792299|ref|YP_004025222.1| regulator of chromosome condensation rcc1 [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312179439|gb|ADQ39609.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 754

 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 104/382 (27%), Positives = 167/382 (43%), Gaps = 59/382 (15%)

Query: 97  EASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLT 156
           E +I++ AAG  H +A+   G V+ WGW         +G   T           +SS + 
Sbjct: 45  ENNIIQIAAGNYHSLALKGDGTVWAWGWNH-------WGQCGT----------EESSIIP 87

Query: 157 EQVS-PRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLV 215
            +V   +  V+ ++G   S T          K+     A  + +    G+ +   +  + 
Sbjct: 88  VKVKGLKDVVAIAAGRYHSLT---------LKKDGTVWAWGSNKDGQLGNRDAGEYSIVP 138

Query: 216 TLNPGVR-IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES- 273
               G++ +  +AAG  ++L L   G VW WG     Q+  GS  +  S P  I  ++  
Sbjct: 139 VQVKGLKDVVAIAAGDGYSLGLKKDGTVWCWGLNESIQVIDGSN-KDFSVPFQIKGLKDV 197

Query: 274 ---SYGKDRSAALS-------------------RGSVNSEGPGFRVPG-NYVKGIACGGR 310
              + GKD S AL                    RG+        +V G   V  IA G  
Sbjct: 198 VAIAAGKDYSLALKKDGTVWMWEYKYNYYEQLRRGADEYSPVPVQVEGLKDVVAIAAGRY 257

Query: 311 HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
           HS  +   G +  +G   YGQ G G ++D   P  V +L    +  +AAG  H++ +  D
Sbjct: 258 HSLALKKDGTVWAWGNNYYGQLGNGKSEDSYDPVQVKNLK--DVVAIAAGENHSLALKKD 315

Query: 371 GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
           G ++A+G N++GQLG    +   +P  +   SL++V   +++ G  H+  +  DG V+ W
Sbjct: 316 GTIWAWGDNEWGQLGNSISEKLCVP--VQFKSLKDV--VAIAAGCEHSLALKKDGTVWSW 371

Query: 431 GWNKYGQLGLGDVIDRNIPSQV 452
           G N YGQLG G+ ID  +P QV
Sbjct: 372 GNNYYGQLGNGNSIDSYVPVQV 393



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/240 (31%), Positives = 116/240 (48%), Gaps = 27/240 (11%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR---IRMVSSPHPIPCIESSYGKDR 279
           +  +AAG  H+LAL   G VW WG    GQLG G        V   +    +  + G++ 
Sbjct: 249 VVAIAAGRYHSLALKKDGTVWAWGNNYYGQLGNGKSEDSYDPVQVKNLKDVVAIAAGENH 308

Query: 280 SAALSR-GSV------------NSEGPGFRVPGNY-----VKGIACGGRHSAVITDAGAL 321
           S AL + G++            NS      VP  +     V  IA G  HS  +   G +
Sbjct: 309 SLALKKDGTIWAWGDNEWGQLGNSISEKLCVPVQFKSLKDVVAIAAGCEHSLALKKDGTV 368

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
            ++G   YGQ G G++ D   P  V  L    +  +A G  H++ +  DG V+A+G N+F
Sbjct: 369 WSWGNNYYGQLGNGNSIDSYVPVQVRGLK--DVVAIATGNAHSLALKKDGTVWAWGNNEF 426

Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
           GQLG G +++  +P  +    L++V   +++ G+ H+     DG V+ WG N++GQLG G
Sbjct: 427 GQLGNGTNKSSFVP--VQVKGLKDV--VAIAAGSDHSLAFKKDGTVWAWGNNEFGQLGNG 482



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 125/455 (27%), Positives = 186/455 (40%), Gaps = 93/455 (20%)

Query: 47  RDVCG--GGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTE--ASIVK 102
           +DV     GC  ++A+     + +WG+       Y   G    I    P+       +V 
Sbjct: 347 KDVVAIAAGCEHSLALKKDGTVWSWGNN-----YYGQLGNGNSIDSYVPVQVRGLKDVVA 401

Query: 103 AAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPR 162
            A G AH +A+ + G V+ WG  E       FG L  GT         +SSF+  QV   
Sbjct: 402 IATGNAHSLALKKDGTVWAWGNNE-------FGQLGNGT--------NKSSFVPVQVKGL 446

Query: 163 SQVSRSSGGTSSG----TDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCL 214
             V   + G+        DG     G+ E G              + S G     A P  
Sbjct: 447 KDVVAIAAGSDHSLAFKKDGTVWAWGNNEFGQ-----------LGNGSGGYGQYYAVPVQ 495

Query: 215 VTLNPGVR-IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES 273
           V    G++ +  VAAG  H+LAL   G +W WG    G LG  + I     P  +  ++ 
Sbjct: 496 V---KGLKDVVAVAAGSVHSLALKKDGTIWAWGSNYHGLLG--NDIERSFVPVQVKGLKD 550

Query: 274 ----SYGKDRSAALSR-GSV-------------NSEGPGFRVPGNY-----VKGIACGGR 310
               + G + S  L + G+V             NS      VP        V  IA G  
Sbjct: 551 VVAIAAGSNHSLVLKKDGTVWAWGEVWFDLLNENSRLVYSSVPVQIKGLKDVVAIAAGEH 610

Query: 311 HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG------VAAGLWHT 364
           HS  +   G +  +G   +GQ G        SP    SL+ +Q++G      +A G WH+
Sbjct: 611 HSLGLKKDGTVWAWGDNFFGQLGN-------SPREKYSLVPVQVKGLKDILAIATGEWHS 663

Query: 365 ICISSDGDVYAFGGNQFGQLG---TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
           + I  DG V+A+G N  GQLG   +G D+   +P  +    +++V +  +S G+ H+  +
Sbjct: 664 LAIKKDGTVWAWGENSTGQLGNETSGKDKYSYVP--VQVKGIKDVLA--ISAGSYHSLAL 719

Query: 422 ADDGKVFCWGWNKYGQLGLGDV-IDRNIPSQVTIE 455
             DG V+ WG N  GQLG G   +   +P QV I+
Sbjct: 720 KKDGTVWGWGANARGQLGNGGAGVYSTVPVQVIIK 754



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 110/389 (28%), Positives = 162/389 (41%), Gaps = 69/389 (17%)

Query: 91  PFPLPTE--ASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVF 148
           P P+  E    +V  AAG  H +A+ + G V+ WG          +G L  G G  +D +
Sbjct: 238 PVPVQVEGLKDVVAIAAGRYHSLALKKDGTVWAWG-------NNYYGQL--GNGKSEDSY 288

Query: 149 E-RQSSFLTEQVSPRSQVSRSSGGTSSGTD-GRGSGEEGSKRRRISLAKQTAESSSSGDE 206
           +  Q   L + V+  +  + S      GT    G  E G     IS             E
Sbjct: 289 DPVQVKNLKDVVAIAAGENHSLALKKDGTIWAWGDNEWGQLGNSIS-------------E 335

Query: 207 NLSAFPCL-VTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSP 265
            L    C+ V       +  +AAG  H+LAL   G VW WG    GQLG G+ I    S 
Sbjct: 336 KL----CVPVQFKSLKDVVAIAAGCEHSLALKKDGTVWSWGNNYYGQLGNGNSI---DSY 388

Query: 266 HPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFG 325
            P+                RG  +            V  IA G  HS  +   G +  +G
Sbjct: 389 VPVQV--------------RGLKD------------VVAIATGNAHSLALKKDGTVWAWG 422

Query: 326 WGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLG 385
              +GQ G G+      P  V  L    +  +AAG  H++    DG V+A+G N+FGQLG
Sbjct: 423 NNEFGQLGNGTNKSSFVPVQVKGLK--DVVAIAAGSDHSLAFKKDGTVWAWGNNEFGQLG 480

Query: 386 TG-GDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVI 444
            G G   +     +    L++V   +V+ G+ H+  +  DG ++ WG N +G LG  D+ 
Sbjct: 481 NGSGGYGQYYAVPVQVKGLKDV--VAVAAGSVHSLALKKDGTIWAWGSNYHGLLG-NDIE 537

Query: 445 DRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
              +P QV  ++  V   +A G  H+L+L
Sbjct: 538 RSFVPVQVKGLKDVVA--IAAGSNHSLVL 564



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 121/274 (44%), Gaps = 31/274 (11%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGL-GSRIRMVSSPHPIPCIESSYGKDRS 280
            I  +AAG  H+LAL   G VW WG+   GQ G   S I  V        +  + G+  S
Sbjct: 47  NIIQIAAGNYHSLALKGDGTVWAWGWNHWGQCGTEESSIIPVKVKGLKDVVAIAAGRYHS 106

Query: 281 AALSR-GSV-----NSEGP-GFRVPGNY------VKG------IACGGRHSAVITDAGAL 321
             L + G+V     N +G  G R  G Y      VKG      IA G  +S  +   G +
Sbjct: 107 LTLKKDGTVWAWGSNKDGQLGNRDAGEYSIVPVQVKGLKDVVAIAAGDGYSLGLKKDGTV 166

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYA--FGGN 379
             +G     Q   GS  D   P  +  L    +  +AAG  +++ +  DG V+   +  N
Sbjct: 167 WCWGLNESIQVIDGSNKDFSVPFQIKGLK--DVVAIAAGKDYSLALKKDGTVWMWEYKYN 224

Query: 380 QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG 439
            + QL  G D+   +P  +    L++V   +++ G  H+  +  DG V+ WG N YGQLG
Sbjct: 225 YYEQLRRGADEYSPVP--VQVEGLKDV--VAIAAGRYHSLALKKDGTVWAWGNNYYGQLG 280

Query: 440 LGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLL 472
            G   D   P QV  ++  V   +A G  H+L L
Sbjct: 281 NGKSEDSYDPVQVKNLKDVVA--IAAGENHSLAL 312



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 63/112 (56%), Gaps = 7/112 (6%)

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           S   + S L   I  +AAG +H++ +  DG V+A+G N +GQ GT  +++  +P  +   
Sbjct: 36  SETTLLSKLENNIIQIAAGNYHSLALKGDGTVWAWGWNHWGQCGT--EESSIIP--VKVK 91

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNI-PSQV 452
            L++V   +++ G  H+  +  DG V+ WG NK GQLG  D  + +I P QV
Sbjct: 92  GLKDV--VAIAAGRYHSLTLKKDGTVWAWGSNKDGQLGNRDAGEYSIVPVQV 141


>gi|365877111|ref|ZP_09416617.1| Ig domain-containing protein [Elizabethkingia anophelis Ag1]
 gi|442586957|ref|ZP_21005779.1| Ig domain-containing protein [Elizabethkingia anophelis R26]
 gi|365755385|gb|EHM97318.1| Ig domain-containing protein [Elizabethkingia anophelis Ag1]
 gi|442563364|gb|ELR80577.1| Ig domain-containing protein [Elizabethkingia anophelis R26]
          Length = 658

 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 121/254 (47%), Gaps = 43/254 (16%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  +AAG  H+L LS  G+V+  G    GQLG+                           
Sbjct: 409 VKDIAAGDYHSLLLSTSGEVYVAGKNDYGQLGIMD------------------------L 444

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
           L+R   N   P F V    +K IA    HS ++T++G ++  G+   GQ G G+T+  ++
Sbjct: 445 LNR--TNFTKPKFNVSN--IKKIAASSEHSILLTNSGEVMVAGFNNRGQLGLGNTNASIT 500

Query: 343 PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPS 402
                ++    ++ ++   + T+ +++ G+VYA GGN  GQLG G +   T    +   +
Sbjct: 501 FQTSKTIS--DVKDISTSGYSTLVLTNSGEVYATGGNSNGQLGLGDETDRTSFTKISTVT 558

Query: 403 LENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR----NIPSQVTIEGCV 458
               ++K++S G  H  V+ + G+++  GWN YG+LG GD  +R     +P    IE   
Sbjct: 559 ----NAKNISMGVFHALVLTNSGEIYGCGWNAYGKLGFGDDTNRTSYTKVPDINNIE--- 611

Query: 459 PRNVACGWWHTLLL 472
             N+A G  H+LL+
Sbjct: 612 --NIAVGKDHSLLI 623



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 101/219 (46%), Gaps = 35/219 (15%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
            I  +AA   H++ L++ G+V   G+   GQLGLG+               +S     S 
Sbjct: 459 NIKKIAASSEHSILLTNSGEVMVAGFNNRGQLGLGNT-------------NASITFQTSK 505

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL 341
            +S                 VK I+  G  + V+T++G +   G    GQ G G   D  
Sbjct: 506 TISD----------------VKDISTSGYSTLVLTNSGEVYATGGNSNGQLGLGDETDRT 549

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           S   +S++     + ++ G++H + +++ G++Y  G N +G+LG G D   T       P
Sbjct: 550 SFTKISTV--TNAKNISMGVFHALVLTNSGEIYGCGWNAYGKLGFGDDTNRT--SYTKVP 605

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL 440
            + N+  ++++ G  H+ +I   GK++  G N YGQLGL
Sbjct: 606 DINNI--ENIAVGKDHSLLINSMGKIYGAGSNLYGQLGL 642



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 87/174 (50%), Gaps = 9/174 (5%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGI-QIEGVAAG 360
           +K IA G  H   + ++G +   G   YGQ G G  D   + N    L  I  ++ +AAG
Sbjct: 358 IKKIALGLTHILFLNNSGEVYVNGSNNYGQIGLG--DQWGTNNAYVKLTDIPTVKDIAAG 415

Query: 361 LWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL-LDAPSLENVHSKSVSCGARHTA 419
            +H++ +S+ G+VY  G N +GQLG      + L R     P     + K ++  + H+ 
Sbjct: 416 DYHSLLLSTSGEVYVAGKNDYGQLGI----MDLLNRTNFTKPKFNVSNIKKIAASSEHSI 471

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           ++ + G+V   G+N  GQLGLG+  + +I  Q +      ++++   + TL+L 
Sbjct: 472 LLTNSGEVMVAGFNNRGQLGLGNT-NASITFQTSKTISDVKDISTSGYSTLVLT 524



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 118/293 (40%), Gaps = 58/293 (19%)

Query: 94  LPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSS 153
           +PT   I   AAG  H + ++  GEVY  G  +    G +  DL   T   K  F   + 
Sbjct: 406 IPTVKDI---AAGDYHSLLLSTSGEVYVAGKNDYGQLGIM--DLLNRTNFTKPKFNVSNI 460

Query: 154 FLTEQVSPRSQVSRSSGGTS-SGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFP 212
                 S  S +  +SG    +G + RG    G+    I+   QT+++ S          
Sbjct: 461 KKIAASSEHSILLTNSGEVMVAGFNNRGQLGLGNTNASITF--QTSKTISD--------- 509

Query: 213 CLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIE 272
                     +  ++  G  TL L++ G+V+  G    GQLGLG                
Sbjct: 510 ----------VKDISTSGYSTLVLTNSGEVYATGGNSNGQLGLGDE-------------- 545

Query: 273 SSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQC 332
                DR++     +V +            K I+ G  H+ V+T++G +   GW  YG+ 
Sbjct: 546 ----TDRTSFTKISTVTN-----------AKNISMGVFHALVLTNSGEIYGCGWNAYGKL 590

Query: 333 GQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLG 385
           G G   +  S   V  +    IE +A G  H++ I+S G +Y  G N +GQLG
Sbjct: 591 GFGDDTNRTSYTKVPDIN--NIENIAVGKDHSLLINSMGKIYGAGSNLYGQLG 641


>gi|194227810|ref|XP_001917704.1| PREDICTED: LOW QUALITY PROTEIN: x-linked retinitis pigmentosa
           GTPase regulator-like [Equus caballus]
          Length = 915

 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 64/171 (37%), Positives = 94/171 (54%), Gaps = 4/171 (2%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           +ACG  H+AV+T    L  FG   +GQ G GS      P C+ +L   +++ VA G  HT
Sbjct: 40  LACGDEHTAVVTGNNKLYMFGSNNWGQLGLGSESPVSKPTCIKALKPEKVKFVACGRTHT 99

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQ-AETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
           I  +  G VYA GGN  GQLG G D+   T  R+    S   +  K +S G+  +A + +
Sbjct: 100 IVATEGGKVYATGGNSEGQLGLGDDEDRNTFHRIKFFTSQHKI--KQLSAGSSSSAALTE 157

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAV 474
           DG++F WG N  GQ+GL ++ +  +P QVTI G     V+CG++H+  +  
Sbjct: 158 DGELFMWGDNSEGQIGLKNIDNVCVPHQVTI-GKPISWVSCGYYHSAFITT 207



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 93/297 (31%), Positives = 136/297 (45%), Gaps = 43/297 (14%)

Query: 213 CLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS--------RIRMVSS 264
           C+  L P  ++  VA G  HT+  ++ G+V+  G   EGQLGLG         RI+  +S
Sbjct: 80  CIKALKPE-KVKFVACGRTHTIVATEGGKVYATGGNSEGQLGLGDDEDRNTFHRIKFFTS 138

Query: 265 PHPIPCIESSYGKD----RSAALSRGSVNSEG------------PGFRVPGNYVKGIACG 308
            H I  + +             L     NSEG            P     G  +  ++CG
Sbjct: 139 QHKIKQLSAGSSSSAALTEDGELFMWGDNSEGQIGLKNIDNVCVPHQVTIGKPISWVSCG 198

Query: 309 GRHSAVITDAGALLTFGWGLYGQCGQGST--DDELSPNCVSSLLGIQIEGVAAGLWHTIC 366
             HSA IT  G L TFG    G+ G  S    +   P  V  +    I+ VA G  HT+ 
Sbjct: 199 YYHSAFITTEGELYTFGEPESGKLGLPSKLLINHRIPQLVPGIPEKVIQ-VACGGGHTVV 257

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAET-LPRLLDAPSLENVHSKSVSCGARHTAVIADDG 425
           ++ +  VY FG  QFGQLG G    ET  P +++   +++     +SCG  HTA+I D G
Sbjct: 258 LTENA-VYTFGLGQFGQLGLGTFIFETSEPTVIE--HIKDQKISYISCGENHTALITDTG 314

Query: 426 KVFCWGWNKYGQLGLG--DVIDRNIPSQVTIEGCVPRN-----VACGWWHTLLLAVP 475
            ++ +G  ++G+LGLG  +  ++ +P+      C  R      VACG  H L+ A P
Sbjct: 315 LIYTFGDGRHGKLGLGLENFTNQFVPTLC----CSSRRFIVQLVACGGCHMLVFATP 367



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 84/292 (28%), Positives = 125/292 (42%), Gaps = 60/292 (20%)

Query: 103 AAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPR 162
            A G  H +  TEGG+VY  G       G   G L  G   D++ F R   F T Q   +
Sbjct: 92  VACGRTHTIVATEGGKVYATG-------GNSEGQLGLGDDEDRNTFHR-IKFFTSQHKIK 143

Query: 163 SQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLN 218
              + SS   +   DG     G   EG    +I L            +N+   P  VT+ 
Sbjct: 144 QLSAGSSSSAALTEDGELFMWGDNSEG----QIGL---------KNIDNV-CVPHQVTI- 188

Query: 219 PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
            G  I+ V+ G  H+  ++  G+++ +G    G+LGL S++ +    H IP +       
Sbjct: 189 -GKPISWVSCGYYHSAFITTEGELYTFGEPESGKLGLPSKLLIN---HRIPQL------- 237

Query: 279 RSAALSRGSVNSEGPGFRVPG--NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGS 336
                             VPG    V  +ACGG H+ V+T+  A+ TFG G +GQ G G+
Sbjct: 238 ------------------VPGIPEKVIQVACGGGHTVVLTE-NAVYTFGLGQFGQLGLGT 278

Query: 337 TDDELS-PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG 387
              E S P  +  +   +I  ++ G  HT  I+  G +Y FG  + G+LG G
Sbjct: 279 FIFETSEPTVIEHIKDQKISYISCGENHTALITDTGLIYTFGDGRHGKLGLG 330



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 129/279 (46%), Gaps = 38/279 (13%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSY------GKDR 279
           +A G  HT  ++   +++ +G    GQLGLGS    VS P  I  ++         G+  
Sbjct: 40  LACGDEHTAVVTGNNKLYMFGSNNWGQLGLGSE-SPVSKPTCIKALKPEKVKFVACGRTH 98

Query: 280 SAALSRGSV------NSEGP---------------GFRVPGNYVKGIACGGRHSAVITDA 318
           +   + G        NSEG                 F    + +K ++ G   SA +T+ 
Sbjct: 99  TIVATEGGKVYATGGNSEGQLGLGDDEDRNTFHRIKFFTSQHKIKQLSAGSSSSAALTED 158

Query: 319 GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           G L  +G    GQ G  + D+   P+ V+  +G  I  V+ G +H+  I+++G++Y FG 
Sbjct: 159 GELFMWGDNSEGQIGLKNIDNVCVPHQVT--IGKPISWVSCGYYHSAFITTEGELYTFGE 216

Query: 379 NQFGQLGTGGDQ--AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYG 436
            + G+LG          +P+L+     + +    V+CG  HT V+ ++  V+ +G  ++G
Sbjct: 217 PESGKLGLPSKLLINHRIPQLVPGIPEKVIQ---VACGGGHTVVLTENA-VYTFGLGQFG 272

Query: 437 QLGLGDVI-DRNIPSQVT-IEGCVPRNVACGWWHTLLLA 473
           QLGLG  I + + P+ +  I+      ++CG  HT L+ 
Sbjct: 273 QLGLGTFIFETSEPTVIEHIKDQKISYISCGENHTALIT 311


>gi|403263467|ref|XP_003924053.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
           [Saimiri boliviensis boliviensis]
          Length = 1024

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 119/253 (47%), Gaps = 30/253 (11%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           ++   V+ G  H+LA+   G+V+ WG G EGQLG+G    +  +P  I  +         
Sbjct: 75  LKFDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEINFTPRKITTLN-------- 126

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DD 339
                             G  +  ++CG  HS  ++    + ++G   +GQ G G     
Sbjct: 127 ------------------GIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPS 168

Query: 340 ELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLP-RLL 398
           + SP  V SL GI +  VAAG  H+  +S  G  + +G N  GQL   G   +    + L
Sbjct: 169 QPSPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPL 228

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGC 457
              +L+N+    +SCG  HTAV++ DGKVF +G N  GQLG     ++  P  V  I+G 
Sbjct: 229 SIGALKNLGVIYISCGDEHTAVLSQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDGL 288

Query: 458 VPRNVACGWWHTL 470
           V + + CG  HT+
Sbjct: 289 VSQ-IDCGGDHTI 300



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 103/227 (45%), Gaps = 44/227 (19%)

Query: 214 LVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES 273
           + TLN G++I  V+ G  H+LALS   QV+ WG    GQLGLG       SP  +  +E 
Sbjct: 122 ITTLN-GIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQPSPQRVRSLE- 179

Query: 274 SYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWG------ 327
                                    G  +  +A GG HS  ++  G   +FGWG      
Sbjct: 180 -------------------------GIPLAQVAAGGAHSFALSLCGT--SFGWGSNSAGQ 212

Query: 328 --LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLG 385
             L G+  Q  ++  LS   + +L  + +  ++ G  HT  +S DG V+ FG N  GQLG
Sbjct: 213 LALSGRNVQVQSNKPLS---IGALKNLGVIYISCGDEHTAVLSQDGKVFTFGDNSSGQLG 269

Query: 386 TGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
                 +  P+L++   ++ + S+ + CG  HT A +   G+V  +G
Sbjct: 270 YSPTPEKRGPQLVE--RIDGLVSQ-IDCGGDHTIAYVHTTGQVVSFG 313



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 87/184 (47%), Gaps = 13/184 (7%)

Query: 298 PGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGV 357
           PG  +   A G RH+ ++     + + G    GQ G+        P  V +L  ++ + V
Sbjct: 21  PGAELLQAASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDLPEPVQALKTLKFDLV 80

Query: 358 AAGLWHTICISSDGDVYAFGGNQFGQLGTGG-DQAETLPRLLDAPSLENVHSKSVSCGAR 416
           + G  H++ +   G V+A+G    GQLG G   +    PR +   +L  +    VSCG  
Sbjct: 81  SCGKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEINFTPRKIT--TLNGIKIIQVSCGHY 138

Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ------VTIEGCVPRNVACGWWHTL 470
           H+  ++ D +VF WG N +GQLGLG    +  PSQ       ++EG     VA G  H+ 
Sbjct: 139 HSLALSKDSQVFSWGKNSHGQLGLG----KEFPSQPSPQRVRSLEGIPLAQVAAGGAHSF 194

Query: 471 LLAV 474
            L++
Sbjct: 195 ALSL 198


>gi|326496164|dbj|BAJ90703.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 907

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 62/171 (36%), Positives = 95/171 (55%), Gaps = 4/171 (2%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V  + CG RH++++T  G + T+G    G+ G G+ +D + P  V SL    I+ VA G 
Sbjct: 79  VYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLAASNIDFVACGE 138

Query: 362 WHTICISSDGDVYAFGG--NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
           +HT  +++ G++Y +G   +  G LG G D    +PR +  P LE +    VSCG  HTA
Sbjct: 139 FHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGP-LEGLQIAYVSCGTWHTA 197

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
           +I   G++F +G   +G LG G+V   + P +V ++ G     VACG WHT
Sbjct: 198 LITSMGQLFTFGDGSFGVLGHGNVKSISCPREVESLSGLKTIAVACGVWHT 248



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 122/258 (47%), Gaps = 42/258 (16%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G++IA V+ G  HT  ++ +GQ++ +G G  G LG G+ ++ +S P  +  +        
Sbjct: 183 GLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGN-VKSISCPREVESLS------- 234

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITD-----------AGALLTFGWGL 328
                              G     +ACG  H+A I +           AG L T+G G 
Sbjct: 235 -------------------GLKTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGD 275

Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGG 388
             + G G  +  L P CV+SL+      VA G   T+ +++ G V+  G + +GQLG   
Sbjct: 276 KHRLGHGDKEARLKPTCVASLIDYDFYRVACGHSLTVGLTTSGKVWTMGNSVYGQLG--N 333

Query: 389 DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNI 448
             ++  P L++   + + H   ++CG+ H AV+    +VF WG    G+LG GDV DR +
Sbjct: 334 PNSDGRPCLVE-DKIASEHVLQIACGSYHVAVLTSRSEVFTWGKGANGRLGHGDVEDRKV 392

Query: 449 PSQV-TIEGCVPRNVACG 465
           P+ V  +     R++ACG
Sbjct: 393 PTTVEALRDRAVRHIACG 410



 Score = 47.0 bits (110), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 61/166 (36%), Gaps = 32/166 (19%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
           GD+     P  V          VA G   T+ L+  G+VW  G    GQLG         
Sbjct: 282 GDKEARLKPTCVASLIDYDFYRVACGHSLTVGLTTSGKVWTMGNSVYGQLG--------- 332

Query: 264 SPHP--IPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
           +P+    PC+                        ++   +V  IACG  H AV+T    +
Sbjct: 333 NPNSDGRPCLVED---------------------KIASEHVLQIACGSYHVAVLTSRSEV 371

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI 367
            T+G G  G+ G G  +D   P  V +L    +  +A G   T  I
Sbjct: 372 FTWGKGANGRLGHGDVEDRKVPTTVEALRDRAVRHIACGANFTAAI 417


>gi|432856462|ref|XP_004068433.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Oryzias latipes]
          Length = 4777

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 86/303 (28%), Positives = 129/303 (42%), Gaps = 80/303 (26%)

Query: 221  VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            ++   V +GG+H LALS  G+V+ WG   +G+LG G+R          PC       DR 
Sbjct: 3982 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS---------PC-------DRP 4025

Query: 281  AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
              +             + G  V  IA GG HSA IT +G L T+G G YG+ G G ++D+
Sbjct: 4026 RVIES-----------LRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQ 4074

Query: 341  LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            L P  V +L G ++  VA  +G   T+C++ D  V+++G   +G+LG GG     +P  +
Sbjct: 4075 LKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKI 4134

Query: 399  DAPS--------------------------------------------------LENVHS 408
            D+ +                                                  L+    
Sbjct: 4135 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKV 4194

Query: 409  KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWW 467
             +++ G+ H     +DG+V+ WG N  GQLG G       P  V  ++G     VACG  
Sbjct: 4195 IAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSA 4254

Query: 468  HTL 470
            HTL
Sbjct: 4255 HTL 4257



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 78/266 (29%), Positives = 132/266 (49%), Gaps = 30/266 (11%)

Query: 212 PCLVTLNPGVRIATVAA--GGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP 269
           P L+      +I  +AA   G+H LALS  G+V+ WG G  G+LG G    +       P
Sbjct: 435 PMLIHGLSSRKIVKLAAHPDGQHFLALSTSGEVYSWGCGDGGRLGHGDATYLEE-----P 489

Query: 270 CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
            + +++   ++                  G  V  IACG  +SA +T  G L T+G G Y
Sbjct: 490 ALITTFSGKQT------------------GKQVVQIACGSTYSAAVTADGELYTWGRGNY 531

Query: 330 GQCGQGSTDDELSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTG 387
           G+ G GS++D  +P  V++L G ++  VA  +G   T+ ++ +G V+++G   +G+LG G
Sbjct: 532 GRLGHGSSEDVTTPMLVTALKGQKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG 591

Query: 388 GDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
           G      P+L++   L+++    V CG++ +  +  DG+V+ WG     +LG G      
Sbjct: 592 GSDGCKTPKLVE--KLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVR 649

Query: 448 IPSQV-TIEGCVPRNVACGWWHTLLL 472
            P  + +++G    ++A G  H L L
Sbjct: 650 YPKLLDSLQGKKVVDIAVGSTHCLAL 675



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 130/306 (42%), Gaps = 80/306 (26%)

Query: 218  NPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
            N  V+   V +GGRH +AL+  G+V+ WG G +G+LG  SR+     P  I  +++   +
Sbjct: 3006 NYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIR 3064

Query: 278  DRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST 337
            D                          IACG  HSA IT +G L ++G G YG+ G G  
Sbjct: 3065 D--------------------------IACGSSHSAAITSSGELYSWGLGEYGRLGHGDN 3098

Query: 338  DDELSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLP 395
              +L P  V  LLG ++  VA G     T+ ++ +G V+++G   FG+LG GG +   +P
Sbjct: 3099 TTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIP 3158

Query: 396  RLLDAPSLE------------------------------------NVHSKS--------- 410
            + ++  + +                                    +VH +          
Sbjct: 3159 QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQIVEGLRG 3218

Query: 411  -----VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVAC 464
                 V+ GA H   + D G+V+ WG N +GQ G G       P+ V  +EG     VAC
Sbjct: 3219 KKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVAC 3278

Query: 465  GWWHTL 470
            G  H++
Sbjct: 3279 GSSHSV 3284



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 145/364 (39%), Gaps = 80/364 (21%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V   +G  HC+A++  GEVY+WG  E         D   G G ++   +R    + E + 
Sbjct: 3985 VAVNSGGKHCLALSSEGEVYSWGEAE---------DGKLGHG-NRSPCDRPR--VIESLR 4032

Query: 161  PRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPG 220
                V  ++GG  S      SGE        +  K        GD      P LV    G
Sbjct: 4033 GVEVVDIAAGGAHSACIT-ASGE------LFTWGKGRYGRLGHGDSEDQLKPKLVDALQG 4085

Query: 221  VRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
             R+  VA  +G   TL L+D   VW WG G  G+LG G                   G D
Sbjct: 4086 HRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRG-------------------GSD 4126

Query: 279  RSAALSRGSVNSEGPGFRVPGNY-------VKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
                           G +VP          V  + CG + S  +T +GA+ T+G G Y +
Sbjct: 4127 ---------------GCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR 4171

Query: 332  CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
             G GS D    P  V  L G ++  +A G  H +C + DG+VY +G N  GQLG G   A
Sbjct: 4172 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNA 4231

Query: 392  ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
               PRL+ A  L+      V+CG+ HT           W  +K    G        +P+Q
Sbjct: 4232 IQRPRLVAA--LQGKKINRVACGSAHT---------LAWSTSKPTNAG-------KMPAQ 4273

Query: 452  VTIE 455
            V +E
Sbjct: 4274 VPME 4277



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 110/399 (27%), Positives = 164/399 (41%), Gaps = 60/399 (15%)

Query: 55   GFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVT 114
            G   A S   K+  WG  +D  Q     G   ++P      +  ++V+ A G     AVT
Sbjct: 2912 GLESAASIRTKVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT 2970

Query: 115  EGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSS 174
              G++Y  G      +GR+   LS+GT        RQ S L+  V  +  V+  SGG  +
Sbjct: 2971 VEGKIYACGE---ATNGRLGLGLSSGTI----QIPRQISALSNYVVKK--VAVHSGGRHA 3021

Query: 175  ---GTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVA 227
                 DG+    G G++G         K    S  + D+     P L+      RI  +A
Sbjct: 3022 MALTVDGKVFSWGEGDDG---------KLGHFSRMNCDK-----PRLIEALKTKRIRDIA 3067

Query: 228  AGGRHTLALSDIGQVWGWGYGGEGQLGLGS-----RIRMVSSPHPIPCIESSYGKDRSAA 282
             G  H+ A++  G+++ WG G  G+LG G      R ++V        I+ + G   +  
Sbjct: 3068 CGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQT 3127

Query: 283  LS---RGSVNSEGPG-------------------FRVPGNYVKGIACGGRHSAVITDAGA 320
            L+    G V S G G                    R+ G  V  I CG + S  +T +G 
Sbjct: 3128 LALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGV 3187

Query: 321  LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
            + T+G G Y + G G+      P  V  L G +I  VA G  H + ++  G VYA+G N 
Sbjct: 3188 VWTWGKGDYFRLGHGTDVHVRKPQIVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDND 3247

Query: 381  FGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
             GQ G G       P L+    LE      V+CG+ H+ 
Sbjct: 3248 HGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 3284



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 108/240 (45%), Gaps = 35/240 (14%)

Query: 204 GDENLSAFPCLVTL----NPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
           GD      P L+T       G ++  +A G  ++ A++  G+++ WG G  G+LG GS  
Sbjct: 481 GDATYLEEPALITTFSGKQTGKQVVQIACGSTYSAAVTADGELYTWGRGNYGRLGHGSS- 539

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGG--RHSAVITD 317
             V++P  +  ++                          G  V  +ACG     +  +T+
Sbjct: 540 EDVTTPMLVTALK--------------------------GQKVVDVACGSGDAQTLAVTE 573

Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
            G + ++G G YG+ G+G +D   +P  V  L  + I  V  G   ++ ++ DG VY +G
Sbjct: 574 NGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWG 633

Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQ 437
                +LG G D+    P+LLD  SL+      ++ G+ H   + D+G+V  WG N   Q
Sbjct: 634 KGDNQRLGHGTDEHVRYPKLLD--SLQGKKVVDIAVGSTHCLALTDEGEVHSWGSNDKLQ 691



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/271 (25%), Positives = 129/271 (47%), Gaps = 40/271 (14%)

Query: 225  TVAAGGRHTLALSDIGQVWGWGYGGEGQLG--LGSRIRM------VSSPHPIPCI---ES 273
            T++AGG         G ++GWG+   GQLG   G+++++      +++  P+  I   ++
Sbjct: 3888 TLSAGGS--------GTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQT 3939

Query: 274  SYGKDRSAAL--------------SRGSVNSEGPGFRVPGNYVKGIAC--GGRHSAVITD 317
             +       L                 SV++      +   ++K +A   GG+H   ++ 
Sbjct: 3940 LFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS 3999

Query: 318  AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
             G + ++G    G+ G G+      P  + SL G+++  +AAG  H+ CI++ G+++ +G
Sbjct: 4000 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWG 4059

Query: 378  GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGA--RHTAVIADDGKVFCWGWNKY 435
              ++G+LG G  + +  P+L+DA  L+      V+CG+    T  + DD  V+ WG   Y
Sbjct: 4060 KGRYGRLGHGDSEDQLKPKLVDA--LQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDY 4117

Query: 436  GQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
            G+LG G      +P ++ ++ G     V CG
Sbjct: 4118 GKLGRGGSDGCKVPMKIDSLTGLGVVKVECG 4148



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 90/347 (25%), Positives = 144/347 (41%), Gaps = 81/347 (23%)

Query: 100 IVKAAA--GWAHCVAVTEGGEVYTWGWKECVPSGRV-FGDLSTGTGLDKDVFERQSSFLT 156
           IVK AA     H +A++  GEVY+WG   C   GR+  GD    T L++      ++F  
Sbjct: 446 IVKLAAHPDGQHFLALSTSGEVYSWG---CGDGGRLGHGD---ATYLEEPAL--ITTFSG 497

Query: 157 EQVSPRSQVSRSSGGTSSGTDGRGSGE-----EGSKRRRISLAKQTAESSSSGDENLSAF 211
           +Q     QV + + G++        GE      G+  R   L   ++E  ++        
Sbjct: 498 KQTG--KQVVQIACGSTYSAAVTADGELYTWGRGNYGR---LGHGSSEDVTT-------- 544

Query: 212 PCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP 269
           P LVT   G ++  VA  +G   TLA+++ GQVW WG G  G+LG G             
Sbjct: 545 PMLVTALKGQKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG------------- 591

Query: 270 CIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITDAGALLTFGWG 327
                           GS   + P    ++    +  + CG + S  +T  G + T+G G
Sbjct: 592 ----------------GSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKG 635

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN----QFGQ 383
              + G G+ +    P  + SL G ++  +A G  H + ++ +G+V+++G N     F  
Sbjct: 636 DNQRLGHGTDEHVRYPKLLDSLQGKKVVDIAVGSTHCLALTDEGEVHSWGSNDKLQHFDT 695

Query: 384 LGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
           L     Q + L      P L + H   +SCG          G+ F W
Sbjct: 696 LFPNKKQPKAL------PGLNSKHIVGISCGP---------GQSFAW 727



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 83/168 (49%), Gaps = 6/168 (3%)

Query: 302  VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVA-- 358
            V  +A G +    +T  G +   G    G+ G G +   +  P  +S+L    ++ VA  
Sbjct: 2956 VVQVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIQIPRQISALSNYVVKKVAVH 3015

Query: 359  AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
            +G  H + ++ DG V+++G    G+LG         PRL++A  L+    + ++CG+ H+
Sbjct: 3016 SGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA--LKTKRIRDIACGSSHS 3073

Query: 419  AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACG 465
            A I   G+++ WG  +YG+LG GD   +  P  V +  G     VACG
Sbjct: 3074 AAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACG 3121



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 83/178 (46%), Gaps = 15/178 (8%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V  I C  +   +++ +GA+ T          Q      L+P  +  L   +I  +AA  
Sbjct: 404 VTQIVCSEKVFLILSRSGAVYT----------QNYKSTTLAPMLIHGLSSRKIVKLAAHP 453

Query: 362 --WHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSK--SVSCGARH 417
              H + +S+ G+VY++G    G+LG G       P L+   S +    +   ++CG+ +
Sbjct: 454 DGQHFLALSTSGEVYSWGCGDGGRLGHGDATYLEEPALITTFSGKQTGKQVVQIACGSTY 513

Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLAV 474
           +A +  DG+++ WG   YG+LG G   D   P  VT ++G    +VACG      LAV
Sbjct: 514 SAAVTADGELYTWGRGNYGRLGHGSSEDVTTPMLVTALKGQKVVDVACGSGDAQTLAV 571



 Score = 42.0 bits (97), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 3/78 (3%)

Query: 48  DVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAA 105
           D+    CG  F++A++   ++ TWG  D+    + T  +H   P+         +V  A 
Sbjct: 609 DIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTD-EHVRYPKLLDSLQGKKVVDIAV 667

Query: 106 GWAHCVAVTEGGEVYTWG 123
           G  HC+A+T+ GEV++WG
Sbjct: 668 GSTHCLALTDEGEVHSWG 685



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 5/73 (6%)

Query: 53   GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
            G  F++A++ S  + TWG  D   LG     S  H   P          ++  A G  HC
Sbjct: 4148 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRRPRQVQGLQGKKVIAIATGSLHC 4204

Query: 111  VAVTEGGEVYTWG 123
            V  TE GEVYTWG
Sbjct: 4205 VCCTEDGEVYTWG 4217


>gi|118349964|ref|XP_001008263.1| Regulator of chromosome condensation [Tetrahymena thermophila]
 gi|89290030|gb|EAR88018.1| Regulator of chromosome condensation [Tetrahymena thermophila
           SB210]
          Length = 2290

 Score =  102 bits (254), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 73/249 (29%), Positives = 108/249 (43%), Gaps = 43/249 (17%)

Query: 195 KQTAESSSSGDENLSAF--PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQ 252
           K   +    G+EN      P  + + P  +   VA G  H++AL+D GQ++ WG    GQ
Sbjct: 313 KSKIQKGQLGNENFVNVYEPTELLVWPKRKFIQVACGSSHSMALTDNGQIFTWGKNTRGQ 372

Query: 253 LGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHS 312
           LG G R   +                              P   +       I  G +HS
Sbjct: 373 LGQGHRNDQLK-----------------------------PTMIIIEVMATSICSGDQHS 403

Query: 313 AVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGD 372
           A I+D   L T+G G Y + G G T DEL P  V  L  + +  V+ G+ HT+ I+++G 
Sbjct: 404 AFISDEKELYTWGNGQYFRLGHGVTTDELYPKKVVVLEDVYVTHVSCGMTHTLAITNEGF 463

Query: 373 VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGW 432
           VYA+G    G+LG   +      + L  P+        VS G  H+  + D G ++ WG 
Sbjct: 464 VYAWGDGMSGKLGVQENN-----KSLHLPT-------RVSAGGLHSMALTDQGILYSWGS 511

Query: 433 NKYGQLGLG 441
           +K G LG+G
Sbjct: 512 SKGGVLGIG 520



 Score =  100 bits (250), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 67/237 (28%), Positives = 117/237 (49%), Gaps = 15/237 (6%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  V+ G  HTL ++D G ++ +G G +G+L L    +++        +++     +   
Sbjct: 270 IKHVSCGHHHTLVITDQGTIFYFGMGTQGKLFLLRECQLL--------LQNKSKIQKGQL 321

Query: 283 LSRGSVNSEGPGFRV--PGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
            +   VN   P   +  P      +ACG  HS  +TD G + T+G    GQ GQG  +D+
Sbjct: 322 GNENFVNVYEPTELLVWPKRKFIQVACGSSHSMALTDNGQIFTWGKNTRGQLGQGHRNDQ 381

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
           L P  +  ++ +    + +G  H+  IS + ++Y +G  Q+ +LG G    E  P+    
Sbjct: 382 LKPTMI--IIEVMATSICSGDQHSAFISDEKELYTWGNGQYFRLGHGVTTDELYPK--KV 437

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR-NIPSQVTIEG 456
             LE+V+   VSCG  HT  I ++G V+ WG    G+LG+ +     ++P++V+  G
Sbjct: 438 VVLEDVYVTHVSCGMTHTLAITNEGFVYAWGDGMSGKLGVQENNKSLHLPTRVSAGG 494



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 54/193 (27%), Positives = 93/193 (48%), Gaps = 26/193 (13%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYG------------------QCGQGSTDDELSP 343
           +K ++CG  H+ VITD G +  FG G  G                  Q GQ   ++ ++ 
Sbjct: 270 IKHVSCGHHHTLVITDQGTIFYFGMGTQGKLFLLRECQLLLQNKSKIQKGQLGNENFVNV 329

Query: 344 NCVSSLL---GIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
              + LL     +   VA G  H++ ++ +G ++ +G N  GQLG G    +  P ++  
Sbjct: 330 YEPTELLVWPKRKFIQVACGSSHSMALTDNGQIFTWGKNTRGQLGQGHRNDQLKPTMI-- 387

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVP 459
             +  V + S+  G +H+A I+D+ +++ WG  +Y +LG G   D   P +V + E    
Sbjct: 388 --IIEVMATSICSGDQHSAFISDEKELYTWGNGQYFRLGHGVTTDELYPKKVVVLEDVYV 445

Query: 460 RNVACGWWHTLLL 472
            +V+CG  HTL +
Sbjct: 446 THVSCGMTHTLAI 458



 Score = 40.4 bits (93), Expect = 1.9,   Method: Composition-based stats.
 Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 2/78 (2%)

Query: 363 HTICISSDGDVYAFGGNQFGQLGTGGD-QAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
           H I IS  G  Y++G N++ QLG G   +   +P+ +   +LE       +C  R +A++
Sbjct: 800 HAIAISHKGVAYSWGSNKYYQLGLGYMCKYNHIPQKIQG-ALETKRIIMSTCSDRFSALL 858

Query: 422 ADDGKVFCWGWNKYGQLG 439
            D G+++ +G +  G LG
Sbjct: 859 TDKGEIWTFGTSDSGVLG 876



 Score = 39.3 bits (90), Expect = 4.2,   Method: Composition-based stats.
 Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 13/115 (11%)

Query: 14  VFMWGY-LPGALPQ--RSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWG 70
           +F WG    G L Q  R+  L P ++ + +   S    +C G    A  ISD ++L TWG
Sbjct: 362 IFTWGKNTRGQLGQGHRNDQLKPTMIIIEVMATS----ICSGDQHSAF-ISDEKELYTWG 416

Query: 71  STD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWG 123
           +     LG    T   +   P+   +  +  +   + G  H +A+T  G VY WG
Sbjct: 417 NGQYFRLGHGVTTDELY---PKKVVVLEDVYVTHVSCGMTHTLAITNEGFVYAWG 468


>gi|345795744|ref|XP_535653.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Canis lupus
           familiaris]
          Length = 1050

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 112/251 (44%), Gaps = 30/251 (11%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
            I  VA G  H+LALSD GQ++ WG G +GQLGL +    V+ P  I             
Sbjct: 85  HIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ------------ 132

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDE 340
                         ++    +  ++CG  H   +   G   T+G   +GQ G G     +
Sbjct: 133 --------------KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEYPSQ 178

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
            SP  V SL GI +  VAAG  H+  +S  G V+ +G N  GQLG   ++    P  +  
Sbjct: 179 ASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKL 238

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVP 459
              + V    +SCG  HTAV+   G VF +G    GQLG   + D   P +V  + G   
Sbjct: 239 LRTQKV--VYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEV 296

Query: 460 RNVACGWWHTL 470
             +ACG  HTL
Sbjct: 297 TQIACGRQHTL 307



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 140/308 (45%), Gaps = 51/308 (16%)

Query: 84  KHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGL 143
           + G  PE      +  IV  A G +H +A+++ G++++WG      +G   G L   T  
Sbjct: 70  REGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWG------AGSD-GQLGLMTTE 122

Query: 144 DKDVFERQSSFLTEQVSPRSQVSRSSGG---TSSGTDGRGSGEEGSKRRRISLAKQTAES 200
           D     R    L ++++ ++ +  S G     +   DG+      +   ++ L K+    
Sbjct: 123 DSVAVPR----LIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEYPSQ 178

Query: 201 SSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR 260
           +S         P  V    G+ +A VAAGG H+ ALS  G V+GWG    GQLGL     
Sbjct: 179 AS---------PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE-- 227

Query: 261 MVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA 320
                           +DR +      + ++          V  I+CG  H+AV+T +G 
Sbjct: 228 ----------------EDRESPCHVKLLRTQK---------VVYISCGEEHTAVLTKSGG 262

Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFGGN 379
           + TFG G  GQ G  S +DE++P  V  L+G ++  +A G  HT+  + S G +YAFG  
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 380 QFGQLGTG 387
             GQLGTG
Sbjct: 323 AKGQLGTG 330



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 118/255 (46%), Gaps = 38/255 (14%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  VA GG H++ L + G+V+  G   +GQLG     R  + P  I  +           
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG---HEREGNKPEQIGALAD--------- 83

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                             ++  +ACG  HS  ++D G L ++G G  GQ G  +T+D ++
Sbjct: 84  -----------------QHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA 126

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ-AETLPRLLDA 400
            P  +  L    I  V+ G WH + +++DG  + +G N  GQLG G +  ++  P+    
Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEYPSQASPQ--RV 184

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI---EGC 457
            SLE +    V+ G  H+  ++  G VF WG N  GQLGL D  DR  P  V +   +  
Sbjct: 185 RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKV 244

Query: 458 VPRNVACGWWHTLLL 472
           V   ++CG  HT +L
Sbjct: 245 V--YISCGEEHTAVL 257



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 92/369 (24%), Positives = 144/369 (39%), Gaps = 79/369 (21%)

Query: 39  PLTVGS-AWRDVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLP 95
           P  +G+ A + +    CG   ++A+SD  +L +WG+  D     +T+     +P      
Sbjct: 75  PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 96  TEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFL 155
            + +I++ + G  HC+A+   G+ +TWG           G L    GL K+         
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWG-------KNSHGQL----GLGKEY-------- 175

Query: 156 TEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLA-------KQTAESSSSGDENL 208
             Q SP  Q  RS  G        G    G+    +SL+          A      DE  
Sbjct: 176 PSQASP--QRVRSLEGIPLAQVAAG----GAHSFALSLSGAVFGWGMNNAGQLGLSDEED 229

Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
              PC V L    ++  ++ G  HT  L+  G V+ +G G  GQLG  S   M    +P 
Sbjct: 230 RESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDS---MNDEVNPR 286

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHS-AVITDAGALLTFGWG 327
             +E                        + G+ V  IACG +H+ A +  +G +  FG G
Sbjct: 287 RVLE------------------------LMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLG 385
             GQ G G T +   P+ V             G W  H+  +S+  D + +  +   Q+ 
Sbjct: 323 AKGQLGTGHTCNVKCPSPVK------------GYWAAHSGQLSARADRFKY--HIVKQIF 368

Query: 386 TGGDQAETL 394
           +GGDQ   L
Sbjct: 369 SGGDQTFVL 377



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 62/124 (50%), Gaps = 10/124 (8%)

Query: 354 IEGVAAGLWHTICISSDGDVYAFGGNQFGQLG--TGGDQAETLPRLLDAPSLENVHSKSV 411
           ++ VA G  H++ +  DG+VY  G N  GQLG    G++ E +  L D       H   V
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQIGALADQ------HIVHV 89

Query: 412 SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR-NIPSQV-TIEGCVPRNVACGWWHT 469
           +CG  H+  ++D G++F WG    GQLGL    D   +P  +  +       V+CG WH 
Sbjct: 90  ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149

Query: 470 LLLA 473
           L LA
Sbjct: 150 LALA 153


>gi|330796442|ref|XP_003286276.1| hypothetical protein DICPUDRAFT_17436 [Dictyostelium purpureum]
 gi|325083781|gb|EGC37225.1| hypothetical protein DICPUDRAFT_17436 [Dictyostelium purpureum]
          Length = 423

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 72/222 (32%), Positives = 105/222 (47%), Gaps = 32/222 (14%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
            I  V +G  H+L L+  G V+ WG+G  G  GLG                    KD  A
Sbjct: 192 NIKKVCSGSDHSLVLNKDGTVYSWGHGYFGATGLGK-------------------KDNVA 232

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD--D 339
             ++   N E     +    V  IACGG HS ++T    + +FGWG YGQ G    D  +
Sbjct: 233 TPTKIQFNKE-----LENKLVLDIACGGYHSLILTSDNEIYSFGWGEYGQLGHSENDTKN 287

Query: 340 ELSPNCVSSL-LGIQIEGVAAGLWHT-ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
             SP  + S+    +I+ V AG   T   +   GDVY++G  + G LG G +Q   +P  
Sbjct: 288 YYSPKKIESINSSTKIKSVFAGSHATSFYVDEKGDVYSWGWGEGGTLGFGDNQNVYVPT- 346

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG 439
               SL N+  K ++ G +HT  + +D +V+ +G N +GQLG
Sbjct: 347 -QVKSLSNI--KKIAAGFKHTLALTNDNQVYVFGDNTFGQLG 385



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 131/284 (46%), Gaps = 46/284 (16%)

Query: 206 ENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLG-------SR 258
           ++L   P  +       I ++++G  H++  +D G ++ WG   +GQL  G        +
Sbjct: 115 KDLEVEPKRIETLKNRNIISLSSGYEHSIVTTDKG-LFSWGRSDKGQLANGELKSEIKDQ 173

Query: 259 IRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDA 318
           I   S P  I   +S++                          +K +  G  HS V+   
Sbjct: 174 INYSSKPQFIKNSDSTFRN------------------------IKKVCSGSDHSLVLNKD 209

Query: 319 GALLTFGWGLYGQCGQGSTDDELSPNCV---SSLLGIQIEGVAAGLWHTICISSDGDVYA 375
           G + ++G G +G  G G  D+  +P  +     L    +  +A G +H++ ++SD ++Y+
Sbjct: 210 GTVYSWGHGYFGATGLGKKDNVATPTKIQFNKELENKLVLDIACGGYHSLILTSDNEIYS 269

Query: 376 FGGNQFGQLGTGGDQAETLPRLLDAPS-LENVHS----KSVSCGARHTAVIADD-GKVFC 429
           FG  ++GQLG     +E   +   +P  +E+++S    KSV  G+  T+   D+ G V+ 
Sbjct: 270 FGWGEYGQLG----HSENDTKNYYSPKKIESINSSTKIKSVFAGSHATSFYVDEKGDVYS 325

Query: 430 WGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           WGW + G LG GD  +  +P+QV     + + +A G+ HTL L 
Sbjct: 326 WGWGEGGTLGFGDNQNVYVPTQVKSLSNIKK-IAAGFKHTLALT 368



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 89/182 (48%), Gaps = 15/182 (8%)

Query: 306 ACGGRHSAVITDAGALLTFGWGLYGQCG--QGSTDDELSPNCVSSLLGIQIEGVAAGLWH 363
           + GG    ++T    L + G G YG  G  +   D E+ P  + +L    I  +++G  H
Sbjct: 82  SLGGNFILMLTIDNDLYSMGKGSYGVLGLDKEMKDLEVEPKRIETLKNRNIISLSSGYEH 141

Query: 364 TICISSDGDVYAFGGNQFGQLGTGGDQAE--------TLPRLLDAPSLENVHSKSVSCGA 415
           +I +++D  ++++G +  GQL  G  ++E        + P+ +        + K V  G+
Sbjct: 142 SI-VTTDKGLFSWGRSDKGQLANGELKSEIKDQINYSSKPQFIKNSDSTFRNIKKVCSGS 200

Query: 416 RHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT----IEGCVPRNVACGWWHTLL 471
            H+ V+  DG V+ WG   +G  GLG   +   P+++     +E  +  ++ACG +H+L+
Sbjct: 201 DHSLVLNKDGTVYSWGHGYFGATGLGKKDNVATPTKIQFNKELENKLVLDIACGGYHSLI 260

Query: 472 LA 473
           L 
Sbjct: 261 LT 262


>gi|281344274|gb|EFB19858.1| hypothetical protein PANDA_001437 [Ailuropoda melanoleuca]
          Length = 1050

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 112/251 (44%), Gaps = 30/251 (11%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
            I  VA G  H+LALSD GQ++ WG G +GQLGL +    V+ P  I             
Sbjct: 85  HIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ------------ 132

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDE 340
                         ++    +  ++CG  H   +   G   T+G   +GQ G G     +
Sbjct: 133 --------------KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
            SP  V SL GI +  VAAG  H+  +S  G V+ +G N  GQLG   ++    P  +  
Sbjct: 179 ASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKL 238

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVP 459
              + V    +SCG  HTAV+   G VF +G    GQLG   + D   P +V  + G   
Sbjct: 239 LRTQKV--VYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEV 296

Query: 460 RNVACGWWHTL 470
             +ACG  HTL
Sbjct: 297 TQIACGRQHTL 307



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 140/308 (45%), Gaps = 51/308 (16%)

Query: 84  KHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGL 143
           + G  PE      +  IV  A G +H +A+++ G++++WG      +G   G L   T  
Sbjct: 70  REGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWG------AGSD-GQLGLMTTE 122

Query: 144 DKDVFERQSSFLTEQVSPRSQVSRSSGG---TSSGTDGRGSGEEGSKRRRISLAKQTAES 200
           D     R    L ++++ ++ +  S G     +   DG+      +   ++ L K+    
Sbjct: 123 DSVAVPR----LIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 201 SSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR 260
           +S         P  V    G+ +A VAAGG H+ ALS  G V+GWG    GQLGL     
Sbjct: 179 AS---------PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE-- 227

Query: 261 MVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA 320
                           +DR +      + ++          V  I+CG  H+AV+T +G 
Sbjct: 228 ----------------EDRESPCHVKLLRTQK---------VVYISCGEEHTAVLTKSGG 262

Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFGGN 379
           + TFG G  GQ G  S +DE++P  V  L+G ++  +A G  HT+  + S G +YAFG  
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 380 QFGQLGTG 387
             GQLGTG
Sbjct: 323 ARGQLGTG 330



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 118/255 (46%), Gaps = 38/255 (14%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  VA GG H++ L + G+V+  G   +GQLG     R  + P  I  +           
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG---HEREGNKPEQIGALAD--------- 83

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                             ++  +ACG  HS  ++D G L ++G G  GQ G  +T+D ++
Sbjct: 84  -----------------QHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA 126

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD-QAETLPRLLDA 400
            P  +  L    I  V+ G WH + +++DG  + +G N  GQLG G +  ++  P+    
Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQ--RV 184

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI---EGC 457
            SLE +    V+ G  H+  ++  G VF WG N  GQLGL D  DR  P  V +   +  
Sbjct: 185 RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKV 244

Query: 458 VPRNVACGWWHTLLL 472
           V   ++CG  HT +L
Sbjct: 245 V--YISCGEEHTAVL 257



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 92/369 (24%), Positives = 144/369 (39%), Gaps = 79/369 (21%)

Query: 39  PLTVGS-AWRDVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLP 95
           P  +G+ A + +    CG   ++A+SD  +L +WG+  D     +T+     +P      
Sbjct: 75  PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 96  TEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFL 155
            + +I++ + G  HC+A+   G+ +TWG           G L    GL K+         
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWG-------KNSHGQL----GLGKE--------F 175

Query: 156 TEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLA-------KQTAESSSSGDENL 208
             Q SP  Q  RS  G        G    G+    +SL+          A      DE  
Sbjct: 176 PSQASP--QRVRSLEGIPLAQVAAG----GAHSFALSLSGAVFGWGMNNAGQLGLSDEED 229

Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
              PC V L    ++  ++ G  HT  L+  G V+ +G G  GQLG  S   M    +P 
Sbjct: 230 RESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDS---MNDEVNPR 286

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHS-AVITDAGALLTFGWG 327
             +E                        + G+ V  IACG +H+ A +  +G +  FG G
Sbjct: 287 RVLE------------------------LMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLG 385
             GQ G G T +   P+ V             G W  H+  +S+  D + +  +   Q+ 
Sbjct: 323 ARGQLGTGHTCNVKCPSPVK------------GYWAAHSGQLSARADRFKY--HIVKQIF 368

Query: 386 TGGDQAETL 394
           +GGDQ   L
Sbjct: 369 SGGDQTFVL 377



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 62/124 (50%), Gaps = 10/124 (8%)

Query: 354 IEGVAAGLWHTICISSDGDVYAFGGNQFGQLG--TGGDQAETLPRLLDAPSLENVHSKSV 411
           ++ VA G  H++ +  DG+VY  G N  GQLG    G++ E +  L D       H   V
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQIGALADQ------HIVHV 89

Query: 412 SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR-NIPSQV-TIEGCVPRNVACGWWHT 469
           +CG  H+  ++D G++F WG    GQLGL    D   +P  +  +       V+CG WH 
Sbjct: 90  ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149

Query: 470 LLLA 473
           L LA
Sbjct: 150 LALA 153


>gi|301112376|ref|XP_002905267.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262095597|gb|EEY53649.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 233

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 95/199 (47%), Gaps = 30/199 (15%)

Query: 189 RRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYG 248
           R ++    ++   ++  + +   P +V     V I  VAAGG H+LA+   G+VW WG  
Sbjct: 59  RVVAWGWNSSGQVAAASKEMVQTPTIVEFPKAVEIVAVAAGGMHSLAVDSCGRVWAWGCN 118

Query: 249 GEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGN-YVKGIAC 307
             GQLG+G  +  + +P  +                            +P + + + IA 
Sbjct: 119 TYGQLGIGCEMDKLHTPSLVA---------------------------LPADVHAQRIAA 151

Query: 308 GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGI--QIEGVAAGLWHTI 365
           G  HSAVI  +G + TFGWGLY Q G  +T  EL P  V +L G+   I  VA G WHT 
Sbjct: 152 GWAHSAVILTSGEIFTFGWGLYNQLGHSTTQSELQPVIVDALQGLDSNIVQVACGNWHTA 211

Query: 366 CISSDGDVYAFGGNQFGQL 384
            ++  GD+Y +G  + GQL
Sbjct: 212 ALTESGDLYTWGWGKDGQL 230



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 62/174 (35%), Positives = 93/174 (53%), Gaps = 6/174 (3%)

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
           K +ACG  H+ V+TD+G ++ +GW   GQ    S +   +P  V     ++I  VAAG  
Sbjct: 42  KAVACGSNHALVLTDSGRVVAWGWNSSGQVAAASKEMVQTPTIVEFPKAVEIVAVAAGGM 101

Query: 363 HTICISSDGDVYAFGGNQFGQLGTGGDQAET-LPRLLDAPSLENVHSKSVSCGARHTAVI 421
           H++ + S G V+A+G N +GQLG G +  +   P L+  P+  +VH++ ++ G  H+AVI
Sbjct: 102 HSLAVDSCGRVWAWGCNTYGQLGIGCEMDKLHTPSLVALPA--DVHAQRIAAGWAHSAVI 159

Query: 422 ADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRN---VACGWWHTLLL 472
              G++F +GW  Y QLG         P  V     +  N   VACG WHT  L
Sbjct: 160 LTSGEIFTFGWGLYNQLGHSTTQSELQPVIVDALQGLDSNIVQVACGNWHTAAL 213



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/218 (30%), Positives = 101/218 (46%), Gaps = 28/218 (12%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
           R   VA G  H L L+D G+V  WG+   GQ+   S+  MV +P  +             
Sbjct: 40  RCKAVACGSNHALVLTDSGRVVAWGWNSSGQVAAASK-EMVQTPTIV------------- 85

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL 341
                    E P        +  +A GG HS  +   G +  +G   YGQ G G   D+L
Sbjct: 86  ---------EFP----KAVEIVAVAAGGMHSLAVDSCGRVWAWGCNTYGQLGIGCEMDKL 132

Query: 342 -SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
            +P+ V+    +  + +AAG  H+  I + G+++ FG   + QLG    Q+E  P ++DA
Sbjct: 133 HTPSLVALPADVHAQRIAAGWAHSAVILTSGEIFTFGWGLYNQLGHSTTQSELQPVIVDA 192

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
               + +   V+CG  HTA + + G ++ WGW K GQL
Sbjct: 193 LQGLDSNIVQVACGNWHTAALTESGDLYTWGWGKDGQL 230



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 84/203 (41%), Gaps = 21/203 (10%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
           G   A+ ++DS +++ WG     GQ    S +  + P     P    IV  AAG  H +A
Sbjct: 47  GSNHALVLTDSGRVVAWGWNSS-GQVAAASKEMVQTPTIVEFPKAVEIVAVAAGGMHSLA 105

Query: 113 VTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGT 172
           V   G V+ WG          +G L  G  +DK       S +       +Q  R + G 
Sbjct: 106 VDSCGRVWAWG-------CNTYGQLGIGCEMDK---LHTPSLVALPADVHAQ--RIAAGW 153

Query: 173 SSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGV--RIATVAAGG 230
           +       SGE  +      L  Q   S++  +      P +V    G+   I  VA G 
Sbjct: 154 AHSAVILTSGEIFTFGW--GLYNQLGHSTTQSELQ----PVIVDALQGLDSNIVQVACGN 207

Query: 231 RHTLALSDIGQVWGWGYGGEGQL 253
            HT AL++ G ++ WG+G +GQL
Sbjct: 208 WHTAALTESGDLYTWGWGKDGQL 230



 Score = 38.9 bits (89), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 6/101 (5%)

Query: 26  QRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLIT--WGSTDDLGQSYVTSG 83
           +   + +P +V LP  V +        G   +  I  S ++ T  WG  + LG S   S 
Sbjct: 128 EMDKLHTPSLVALPADVHA---QRIAAGWAHSAVILTSGEIFTFGWGLYNQLGHSTTQSE 184

Query: 84  KHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGW 124
               I +      +++IV+ A G  H  A+TE G++YTWGW
Sbjct: 185 LQPVIVDALQ-GLDSNIVQVACGNWHTAALTESGDLYTWGW 224



 Score = 38.5 bits (88), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 31/116 (26%), Positives = 47/116 (40%), Gaps = 10/116 (8%)

Query: 14  VFMWGYLPG---ALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWG 70
           V  WG+      A   +  + +P +V  P  V      V  GG   ++A+    ++  WG
Sbjct: 60  VVAWGWNSSGQVAAASKEMVQTPTIVEFPKAVEIV--AVAAGGM-HSLAVDSCGRVWAWG 116

Query: 71  STD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGW 124
                 LG        H   P    LP +    + AAGWAH   +   GE++T+GW
Sbjct: 117 CNTYGQLGIGCEMDKLH--TPSLVALPADVHAQRIAAGWAHSAVILTSGEIFTFGW 170


>gi|345325025|ref|XP_001513851.2| PREDICTED: RCC1 and BTB domain-containing protein 1
           [Ornithorhynchus anatinus]
          Length = 531

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 128/270 (47%), Gaps = 31/270 (11%)

Query: 203 SGDENLSAFPCLVTLNPGVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +GD   +  P  + L  G +I +++ G G H L  ++ G V+ WG+ G  QLG G+  + 
Sbjct: 56  TGDNQSTIVPKKLELLSGKKIKSLSYGSGPHVLLSTEDGIVYAWGHNGYSQLGNGTTNQG 115

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
           ++   PI    +   K                        V  +ACG  HS  + D G +
Sbjct: 116 IA---PIQICTNLMIKQ-----------------------VTEVACGSHHSMALADDGEV 149

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ-IEGVAAGLWHTICISSDGDVYAFGGNQ 380
             +G+   GQ G GST ++ +P  V++ L I+ +  +A G   ++ +  +G+VY +G N 
Sbjct: 150 YAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNG 209

Query: 381 FGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL 440
            GQLG G +  +  P      +L +V    + CG  HT  + D+G ++ WG N YGQLG 
Sbjct: 210 NGQLGLGNNGNQLTP--CRVAALHSVCVLQIVCGYAHTLALTDEGLLYAWGANTYGQLGT 267

Query: 441 GDVIDRNIPSQVTIEG-CVPRNVACGWWHT 469
           G+  +   P+Q+ +E   V    AC   HT
Sbjct: 268 GNKSNLLSPAQIMVEKERVVEIAACHSAHT 297



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 105/231 (45%), Gaps = 30/231 (12%)

Query: 203 SGDENLSAFPCLVTLNPGVR-IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +G  N    P  +  N  ++ +  VA G  H++AL+D G+V+ WGY   GQ+G GS    
Sbjct: 109 NGTTNQGIAPIQICTNLMIKQVTEVACGSHHSMALADDGEVYAWGYNNCGQVGSGS---- 164

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
            ++  P P               R   N       +    V  IACG   S  + D G +
Sbjct: 165 -TANQPTP---------------RKVTNC------LHIKRVVSIACGQTSSMAVLDNGEV 202

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             +G+   GQ G G+  ++L+P  V++L  + +  +  G  HT+ ++ +G +YA+G N +
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTPCRVAALHSVCVLQIVCGYAHTLALTDEGLLYAWGANTY 262

Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           GQLGTG       P  +       V  +  +C + HT A     G V+ WG
Sbjct: 263 GQLGTGNKSNLLSPAQIMVEKERVV--EIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 76/154 (49%), Gaps = 4/154 (2%)

Query: 315 ITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW-HTICISSDGDV 373
           +T +  +  FG       G G     + P  +  L G +I+ ++ G   H +  + DG V
Sbjct: 37  VTHSDEVFVFGVNCSNCLGTGDNQSTIVPKKLELLSGKKIKSLSYGSGPHVLLSTEDGIV 96

Query: 374 YAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWN 433
           YA+G N + QLG G       P  +   +L       V+CG+ H+  +ADDG+V+ WG+N
Sbjct: 97  YAWGHNGYSQLGNGTTNQGIAPIQI-CTNLMIKQVTEVACGSHHSMALADDGEVYAWGYN 155

Query: 434 KYGQLGLGDVIDRNIPSQVTIEGCVPR--NVACG 465
             GQ+G G   ++  P +VT    + R  ++ACG
Sbjct: 156 NCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACG 189



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 67/135 (49%), Gaps = 5/135 (3%)

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
           LSP  ++S+    + G +A     I ++   +V+ FG N    LGTG +Q+  +P+ L+ 
Sbjct: 13  LSPQEIASIRKACVFGTSAN--EAIYVTHSDEVFVFGVNCSNCLGTGDNQSTIVPKKLEL 70

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPR 460
            S + + S S   G  H  +  +DG V+ WG N Y QLG G       P Q+     + +
Sbjct: 71  LSGKKIKSLSYGSGP-HVLLSTEDGIVYAWGHNGYSQLGNGTTNQGIAPIQICTNLMIKQ 129

Query: 461 --NVACGWWHTLLLA 473
              VACG  H++ LA
Sbjct: 130 VTEVACGSHHSMALA 144



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 74/176 (42%), Gaps = 42/176 (23%)

Query: 100 IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQV 159
           + + A G  H +A+ + GEVY WG+  C       G + +G+  ++    +    +T  +
Sbjct: 130 VTEVACGSHHSMALADDGEVYAWGYNNC-------GQVGSGSTANQPTPRK----VTNCL 178

Query: 160 SPRSQVSRSSGGTSS------------GTDGRGSGEEGSKRRRISLAKQTAESSSSGDEN 207
             +  VS + G TSS            G +G G    G+   +++               
Sbjct: 179 HIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLT--------------- 223

Query: 208 LSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
               PC V     V +  +  G  HTLAL+D G ++ WG    GQLG G++  ++S
Sbjct: 224 ----PCRVAALHSVCVLQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNLLS 275


>gi|171847108|gb|AAI62028.1| Rpgr protein [Rattus norvegicus]
          Length = 677

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 96/295 (32%), Positives = 141/295 (47%), Gaps = 39/295 (13%)

Query: 213 CLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLG-----SRIRMVSSPHP 267
           C+  L P  ++   A G  HTL  +D G V+  G   EGQLGLG          +    P
Sbjct: 118 CIKALKPE-KVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIGFFTP 176

Query: 268 IPCIES-SYGKDRSAALSRGSV------NSEG------------PGFRVPGNYVKGIACG 308
              I+  S G + SAAL+          NSEG            P     G  +  I+CG
Sbjct: 177 SDIIKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVTVGKPISWISCG 236

Query: 309 GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVS--SLLGI--QIEGVAAGLWHT 364
             HSA +T  G L TFG    G+ G     ++L  N  S   +LGI  ++  VA G  HT
Sbjct: 237 YYHSAFVTTDGELYTFGEPENGKLG---LPNQLLINHRSPQRVLGIPDKVIQVACGGGHT 293

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAET-LPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
           + + ++  VYAFG  QFGQLG G    ET  P+++D   +++     +SCG  HTA++ D
Sbjct: 294 VVL-TEKVVYAFGLGQFGQLGLGTFLFETSEPKIID--RIKDQKISHISCGENHTALMTD 350

Query: 424 DGKVFCWGWNKYGQLGLG--DVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLAVP 475
            G ++ +G  ++G+LGLG  +  ++  P+  +       + +ACG  H L+ A P
Sbjct: 351 IGLMYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLKFTVQLIACGGCHMLVFATP 405



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/243 (31%), Positives = 115/243 (47%), Gaps = 17/243 (6%)

Query: 245 WGYGGEGQLGLGSRIRMVSSPHP--IPCIESSYGKDRSAALSRGSVNSEGP---GFRVPG 299
           WG GG GQ    +R+     P    IP       +  S     G+V + G       +P 
Sbjct: 7   WGTGGLGQYLRPNRVAPAVFPKQAQIPFAAFGMAEPESLVPDTGAVFTFGKTKFAENIPS 66

Query: 300 NY-VKG-----IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ 353
            +  K      ++CG  H+A++T    L  FG   +GQ G GS      P C+ +L   +
Sbjct: 67  KFWFKNDVPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCIKALKPEK 126

Query: 354 IEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGG-DQAETLPRL-LDAPSLENVHSKSV 411
           ++  A G  HT+  +  G VYA GGN  GQLG G  D  +T  ++    PS      K +
Sbjct: 127 VKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIGFFTPS---DIIKQL 183

Query: 412 SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLL 471
           S GA  +A + +DGK+F WG N  GQ+GL +  +  IP +VT+ G     ++CG++H+  
Sbjct: 184 SAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVTV-GKPISWISCGYYHSAF 242

Query: 472 LAV 474
           +  
Sbjct: 243 VTT 245


>gi|443697240|gb|ELT97775.1| hypothetical protein CAPTEDRAFT_180059 [Capitella teleta]
          Length = 453

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 114/237 (48%), Gaps = 32/237 (13%)

Query: 222 RIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
            I + A G G H LA ++ G+V+ WG+ G  QLG GS  +    P P P   S  GK  +
Sbjct: 77  NIVSFAYGSGPHVLATTNAGEVYSWGHNGYCQLGNGSTNQ---GPTPTPVTSSLLGKRIT 133

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
           A                       IACG  HS  ++  G +  +G    GQ G G+T ++
Sbjct: 134 A-----------------------IACGSHHSMALSSEGEIFAWGQNNCGQVGSGTTSNQ 170

Query: 341 LSPNCVSSLLG-IQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLP-RLL 398
            +P  V++ +G  +   +A G   +I     G+V+ +G N  GQLG G +  +  P RL+
Sbjct: 171 PTPRKVTACIGSKKCISIACGQTSSIAAFDTGEVFGWGYNGNGQLGLGNNINQPNPCRLV 230

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
               L NV    ++CG  HT  + D+G ++ WG N YGQLG G+  +   P ++ ++
Sbjct: 231 ---VLNNVFITQIACGYAHTLGLTDEGSLYAWGANSYGQLGTGNKANMISPVRIAVD 284



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 96/212 (45%), Gaps = 27/212 (12%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G RI  +A G  H++ALS  G+++ WG    GQ+G G+     +S  P P         R
Sbjct: 129 GKRITAIACGSHHSMALSSEGEIFAWGQNNCGQVGSGT-----TSNQPTP---------R 174

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDD 339
                 GS                 IACG   S    D G +  +G+   GQ G G+  +
Sbjct: 175 KVTACIGS------------KKCISIACGQTSSIAAFDTGEVFGWGYNGNGQLGLGNNIN 222

Query: 340 ELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLD 399
           + +P  +  L  + I  +A G  HT+ ++ +G +YA+G N +GQLGT G++A  +  +  
Sbjct: 223 QPNPCRLVVLNNVFITQIACGYAHTLGLTDEGSLYAWGANSYGQLGT-GNKANMISPVRI 281

Query: 400 APSLENVHSKSVSCGARHTAVIADDGKVFCWG 431
           A  L      + +     +A +   GKVF WG
Sbjct: 282 AVDLGRFVEIAATHYNHLSAALTQAGKVFMWG 313



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 93/214 (43%), Gaps = 34/214 (15%)

Query: 58  MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTE---ASIVKAAAGWAHCVAVT 114
           +A +++ ++ +WG     G   + +G   + P P P+ +      I   A G  H +A++
Sbjct: 90  LATTNAGEVYSWGHN---GYCQLGNGSTNQGPTPTPVTSSLLGKRITAIACGSHHSMALS 146

Query: 115 EGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSS 174
             GE++ WG   C       G + +GT  ++    +    +T  +  +  +S + G TSS
Sbjct: 147 SEGEIFAWGQNNC-------GQVGSGTTSNQPTPRK----VTACIGSKKCISIACGQTSS 195

Query: 175 GT-----DGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAG 229
                  +  G G  G+ +  +            G+      PC + +   V I  +A G
Sbjct: 196 IAAFDTGEVFGWGYNGNGQLGL------------GNNINQPNPCRLVVLNNVFITQIACG 243

Query: 230 GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
             HTL L+D G ++ WG    GQLG G++  M+S
Sbjct: 244 YAHTLGLTDEGSLYAWGANSYGQLGTGNKANMIS 277


>gi|354487926|ref|XP_003506122.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Cricetulus
           griseus]
 gi|344253822|gb|EGW09926.1| RCC1 and BTB domain-containing protein 2 [Cricetulus griseus]
          Length = 551

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 60/166 (36%), Positives = 98/166 (59%), Gaps = 3/166 (1%)

Query: 309 GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS-LLGIQIEGVAAGLWHTICI 367
           G H  + T  G + T+G   Y Q G G+T+  L P  +S+ L   Q+  VA G +H++ +
Sbjct: 108 GPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVL 167

Query: 368 SSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKV 427
           +SDG+V+A+G N  GQ+G+G    + +PR +    L+N    +++CG   +  + D G+V
Sbjct: 168 TSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTG-CLQNKVVMNIACGQMCSMAVVDTGEV 226

Query: 428 FCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
           + WG+N  GQLGLG   ++  P +V  ++G   + VACG+ HTL+L
Sbjct: 227 YVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 272



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 124/253 (49%), Gaps = 31/253 (12%)

Query: 220 GVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
           G +IA+++ G G H +  +  G+V+ WG+    QLG G+     ++   +PC  S+    
Sbjct: 97  GKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGT-----TNHGLVPCHIST---- 147

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
                             +    V  +ACG  HS V+T  G +  +G+   GQ G GST 
Sbjct: 148 -----------------NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTA 190

Query: 339 DELSPNCVSSLLGIQI-EGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
           ++  P  V+  L  ++   +A G   ++ +   G+VY +G N  GQLG G    +  P  
Sbjct: 191 NQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCR 250

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE-G 456
           + A  L+ +  + V+CG  HT V+ D+G+V+ WG N YGQLG G+  +++ P+ V +E  
Sbjct: 251 VAA--LQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVVEKD 308

Query: 457 CVPRNVACGWWHT 469
            +    AC   HT
Sbjct: 309 RIIEIAACHSAHT 321



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 114/233 (48%), Gaps = 34/233 (14%)

Query: 203 SGDENLSAFPCLVTLN-PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +G  N    PC ++ N    ++  VA G  H+L L+  G+V+ WGY   GQ+G GS    
Sbjct: 133 NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---- 188

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
            ++  PIP         R     +  V             V  IACG   S  + D G +
Sbjct: 189 -TANQPIP--------RRVTGCLQNKV-------------VMNIACGQMCSMAVVDTGEV 226

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             +G+   GQ G GS+ ++ +P  V++L GI+++ VA G  HT+ ++ +G VYA+G N +
Sbjct: 227 YVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSY 286

Query: 382 GQLGTGG--DQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           GQLGTG   +Q+   P +++   +  +     +C + HT A     G V+ WG
Sbjct: 287 GQLGTGNKSNQSYPTPVVVEKDRIIEI----AACHSAHTSAAKTQGGHVYMWG 335



 Score = 38.9 bits (89), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 55/133 (41%), Gaps = 17/133 (12%)

Query: 14  VFMWGYL-PGALPQRSPILSPLVVRLP--LTVGSAWRDVCGGGCGFAMAISDSRKLITWG 70
           VF WGY   G +   S    P+  R+   L         CG  C  +MA+ D+ ++  WG
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMC--SMAVVDTGEVYVWG 230

Query: 71  STDDLGQSYVTSGKHGEIPEPFPLPTEASI--VKAAAGWAHCVAVTEGGEVYTWGWKECV 128
                G   +  G  G  P P  +     I   + A G+AH + +T+ G+VY WG     
Sbjct: 231 YN---GNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG----- 282

Query: 129 PSGRVFGDLSTGT 141
                +G L TG 
Sbjct: 283 --ANSYGQLGTGN 293


>gi|330836035|ref|YP_004410676.1| hypothetical protein [Sphaerochaeta coccoides DSM 17374]
 gi|329747938|gb|AEC01294.1| Listeria/Bacterioides repeat-containing protein [Sphaerochaeta
           coccoides DSM 17374]
          Length = 813

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 78/268 (29%), Positives = 123/268 (45%), Gaps = 41/268 (15%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  V+AGG HT+ L   G +W  GY   GQLGLG                S YG ++   
Sbjct: 536 VEAVSAGGSHTIILKKDGTLWATGYNWFGQLGLGI---------------SGYGTEKKTP 580

Query: 283 LS-RGSVNSEGPGFRVPGNY---VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
           +  + S+         P ++   VK ++ GG H+ ++     L   G+  YG+ G  ++ 
Sbjct: 581 MQVKASI--------APDDFMTDVKEVSAGGDHTMLLKKDDTLWATGYNYYGELGLDNSG 632

Query: 339 DELSPNCVSSLLGIQIE------GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAE 392
              + N    +  +  E        +AG  HT+ +  +G ++A G N +GQLG G    +
Sbjct: 633 SGTTKNTPVQVTSMNTEPSNPVTAFSAGGHHTMILKKNGTLWATGRNIYGQLGDGTTTEK 692

Query: 393 TLPRLLDAPSLEN---VHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIP 449
           T P  + A + +N       +VS G  HT ++  DG ++  G N  G+LG+GD  DR+ P
Sbjct: 693 TTPVQVKASTADNDFMTDVAAVSAGYHHTMIVKKDGTLWATGSNGNGELGVGDNTDRSTP 752

Query: 450 SQVTIEGCV-----PRNVACGWWHTLLL 472
            QV   G V        V+ G +HTL+L
Sbjct: 753 VQVKSSGGVGFMTDVAAVSAGIYHTLIL 780



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 111/239 (46%), Gaps = 32/239 (13%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  V+AGG HT+ L     +W  GY   G+LGL +               S  G  ++  
Sbjct: 596 VKEVSAGGDHTMLLKKDDTLWATGYNYYGELGLDN---------------SGSGTTKNTP 640

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
           +   S+N+E      P N V   + GG H+ ++   G L   G  +YGQ G G+T ++ +
Sbjct: 641 VQVTSMNTE------PSNPVTAFSAGGHHTMILKKNGTLWATGRNIYGQLGDGTTTEKTT 694

Query: 343 P-----NCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
           P     +   +     +  V+AG  HT+ +  DG ++A G N  G+LG G +   + P  
Sbjct: 695 PVQVKASTADNDFMTDVAAVSAGYHHTMIVKKDGTLWATGSNGNGELGVGDNTDRSTPVQ 754

Query: 398 LDAPS----LENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
           + +      + +V   +VS G  HT ++  DG ++  G N YGQLG G   + N P QV
Sbjct: 755 VKSSGGVGFMTDV--AAVSAGIYHTLILKKDGTLWATGRNNYGQLGDGTTTNTNTPVQV 811



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 119/265 (44%), Gaps = 39/265 (14%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           V++ TV+AGG  T+ L   G +W  G    GQLG G+     +   P+    S+   D  
Sbjct: 429 VKVKTVSAGGSSTMILKKDGSLWATGRNEWGQLGDGTTTNRTT---PVRVKASADYND-- 483

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                         F      VK ++ G  H+ ++   G L   G+   GQ G G  D+ 
Sbjct: 484 --------------FMTD---VKEVSIGTNHTMILKTDGTLWAAGYNNSGQLGVGDNDNR 526

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG----GDQAETLPR 396
            +P  V +     +E V+AG  HTI +  DG ++A G N FGQLG G    G + +T  +
Sbjct: 527 RTPVQVMT----DVEAVSAGGSHTIILKKDGTLWATGYNWFGQLGLGISGYGTEKKTPMQ 582

Query: 397 LLD--APSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL---GDVIDRNIPSQ 451
           +    AP       K VS G  HT ++  D  ++  G+N YG+LGL   G    +N P Q
Sbjct: 583 VKASIAPDDFMTDVKEVSAGGDHTMLLKKDDTLWATGYNYYGELGLDNSGSGTTKNTPVQ 642

Query: 452 VTIEGCVPRN----VACGWWHTLLL 472
           VT     P N     + G  HT++L
Sbjct: 643 VTSMNTEPSNPVTAFSAGGHHTMIL 667



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 74/181 (40%), Gaps = 26/181 (14%)

Query: 219 PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
           P   +   +AGG HT+ L   G +W  G    GQLG G+     +   P+    S+   D
Sbjct: 650 PSNPVTAFSAGGHHTMILKKNGTLWATGRNIYGQLGDGTTTEKTT---PVQVKASTADND 706

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
                           F      V  ++ G  H+ ++   G L   G    G+ G G   
Sbjct: 707 ----------------FMTD---VAAVSAGYHHTMIVKKDGTLWATGSNGNGELGVGDNT 747

Query: 339 DELSPNCVSSLLGI----QIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL 394
           D  +P  V S  G+     +  V+AG++HT+ +  DG ++A G N +GQLG G       
Sbjct: 748 DRSTPVQVKSSGGVGFMTDVAAVSAGIYHTLILKKDGTLWATGRNNYGQLGDGTTTNTNT 807

Query: 395 P 395
           P
Sbjct: 808 P 808


>gi|282395057|ref|NP_598844.3| RCC1 and BTB domain-containing protein 2 [Mus musculus]
 gi|282396060|ref|NP_001164165.1| RCC1 and BTB domain-containing protein 2 [Mus musculus]
 gi|81880241|sp|Q99LJ7.1|RCBT2_MOUSE RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
           Full=Chromosome condensation 1-like; AltName:
           Full=Regulator of chromosome condensation and BTB
           domain-containing protein 2
 gi|13096854|gb|AAH03224.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Mus musculus]
 gi|26327151|dbj|BAC27319.1| unnamed protein product [Mus musculus]
 gi|148703914|gb|EDL35861.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2, isoform CRA_a [Mus musculus]
 gi|339779805|gb|AEK06433.1| RC/BTB2 [Mus musculus]
 gi|339779807|gb|AEK06434.1| RC/BTB2 [Mus musculus]
          Length = 551

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 60/166 (36%), Positives = 98/166 (59%), Gaps = 3/166 (1%)

Query: 309 GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS-LLGIQIEGVAAGLWHTICI 367
           G H  + T  G + T+G   Y Q G G+T+  L P  +S+ L   Q+  VA G +H++ +
Sbjct: 108 GPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVL 167

Query: 368 SSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKV 427
           +SDG+V+A+G N  GQ+G+G    + +PR +    L+N    +++CG   +  + D G+V
Sbjct: 168 TSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTG-CLQNKVVMNIACGQMCSMAVVDTGEV 226

Query: 428 FCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
           + WG+N  GQLGLG   ++  P +V  ++G   + VACG+ HTL+L
Sbjct: 227 YVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 272



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 124/253 (49%), Gaps = 31/253 (12%)

Query: 220 GVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
           G +IA+++ G G H +  +  G+V+ WG+    QLG G+     ++   +PC  S+    
Sbjct: 97  GKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGT-----TNHGLVPCHIST---- 147

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
                             +    V  +ACG  HS V+T  G +  +G+   GQ G GST 
Sbjct: 148 -----------------NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTA 190

Query: 339 DELSPNCVSSLLGIQI-EGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
           ++  P  V+  L  ++   +A G   ++ +   G+VY +G N  GQLG G    +  P  
Sbjct: 191 NQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCR 250

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE-G 456
           + A  L+ +  + V+CG  HT V+ D+G+++ WG N YGQLG G+  +++ P+ V +E  
Sbjct: 251 VAA--LQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVEKD 308

Query: 457 CVPRNVACGWWHT 469
            +    AC   HT
Sbjct: 309 RIIEIAACHSAHT 321



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 114/233 (48%), Gaps = 34/233 (14%)

Query: 203 SGDENLSAFPCLVTLN-PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +G  N    PC ++ N    ++  VA G  H+L L+  G+V+ WGY   GQ+G GS    
Sbjct: 133 NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---- 188

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
            ++  PIP         R     +  V             V  IACG   S  + D G +
Sbjct: 189 -TANQPIP--------RRVTGCLQNKV-------------VMNIACGQMCSMAVVDTGEV 226

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             +G+   GQ G GS+ ++ +P  V++L GI+++ VA G  HT+ ++ +G +YA+G N +
Sbjct: 227 YVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSY 286

Query: 382 GQLGTGG--DQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           GQLGTG   +Q+   P +++   +  +     +C + HT A     G V+ WG
Sbjct: 287 GQLGTGNKSNQSYPTPVVVEKDRIIEI----AACHSAHTSAAKTQGGHVYMWG 335



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 55/111 (49%), Gaps = 15/111 (13%)

Query: 370 DGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFC 429
           + +++  G N  G LG G  Q+   PR LD+ + + + S S   G  H  +   DG+VF 
Sbjct: 64  NDEIFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGP-HIVLATTDGEVFT 122

Query: 430 WGWNKYGQLGLGDV--------IDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           WG N Y QLG G          I  N+ ++  IE      VACG +H+L+L
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIE------VACGSYHSLVL 167



 Score = 38.5 bits (88), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 55/133 (41%), Gaps = 17/133 (12%)

Query: 14  VFMWGYL-PGALPQRSPILSPLVVRLP--LTVGSAWRDVCGGGCGFAMAISDSRKLITWG 70
           VF WGY   G +   S    P+  R+   L         CG  C  +MA+ D+ ++  WG
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMC--SMAVVDTGEVYVWG 230

Query: 71  STDDLGQSYVTSGKHGEIPEPFPLPTEASI--VKAAAGWAHCVAVTEGGEVYTWGWKECV 128
                G   +  G  G  P P  +     I   + A G+AH + +T+ G++Y WG     
Sbjct: 231 YN---GNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWG----- 282

Query: 129 PSGRVFGDLSTGT 141
                +G L TG 
Sbjct: 283 --ANSYGQLGTGN 293


>gi|148703915|gb|EDL35862.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2, isoform CRA_b [Mus musculus]
 gi|148703916|gb|EDL35863.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2, isoform CRA_b [Mus musculus]
          Length = 560

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 60/166 (36%), Positives = 98/166 (59%), Gaps = 3/166 (1%)

Query: 309 GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS-LLGIQIEGVAAGLWHTICI 367
           G H  + T  G + T+G   Y Q G G+T+  L P  +S+ L   Q+  VA G +H++ +
Sbjct: 117 GPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVL 176

Query: 368 SSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKV 427
           +SDG+V+A+G N  GQ+G+G    + +PR +    L+N    +++CG   +  + D G+V
Sbjct: 177 TSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTG-CLQNKVVMNIACGQMCSMAVVDTGEV 235

Query: 428 FCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
           + WG+N  GQLGLG   ++  P +V  ++G   + VACG+ HTL+L
Sbjct: 236 YVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 281



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 124/253 (49%), Gaps = 31/253 (12%)

Query: 220 GVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
           G +IA+++ G G H +  +  G+V+ WG+    QLG G+     ++   +PC  S+    
Sbjct: 106 GKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGT-----TNHGLVPCHIST---- 156

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
                             +    V  +ACG  HS V+T  G +  +G+   GQ G GST 
Sbjct: 157 -----------------NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTA 199

Query: 339 DELSPNCVSSLLGIQI-EGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
           ++  P  V+  L  ++   +A G   ++ +   G+VY +G N  GQLG G    +  P  
Sbjct: 200 NQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCR 259

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE-G 456
           + A  L+ +  + V+CG  HT V+ D+G+++ WG N YGQLG G+  +++ P+ V +E  
Sbjct: 260 VAA--LQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVEKD 317

Query: 457 CVPRNVACGWWHT 469
            +    AC   HT
Sbjct: 318 RIIEIAACHSAHT 330



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 114/233 (48%), Gaps = 34/233 (14%)

Query: 203 SGDENLSAFPCLVTLN-PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +G  N    PC ++ N    ++  VA G  H+L L+  G+V+ WGY   GQ+G GS    
Sbjct: 142 NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---- 197

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
            ++  PIP         R     +  V             V  IACG   S  + D G +
Sbjct: 198 -TANQPIP--------RRVTGCLQNKV-------------VMNIACGQMCSMAVVDTGEV 235

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             +G+   GQ G GS+ ++ +P  V++L GI+++ VA G  HT+ ++ +G +YA+G N +
Sbjct: 236 YVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSY 295

Query: 382 GQLGTGG--DQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           GQLGTG   +Q+   P +++   +  +     +C + HT A     G V+ WG
Sbjct: 296 GQLGTGNKSNQSYPTPVVVEKDRIIEI----AACHSAHTSAAKTQGGHVYMWG 344



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 55/111 (49%), Gaps = 15/111 (13%)

Query: 370 DGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFC 429
           + +++  G N  G LG G  Q+   PR LD+ + + + S S   G  H  +   DG+VF 
Sbjct: 73  NDEIFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGP-HIVLATTDGEVFT 131

Query: 430 WGWNKYGQLGLGDV--------IDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           WG N Y QLG G          I  N+ ++  IE      VACG +H+L+L
Sbjct: 132 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIE------VACGSYHSLVL 176



 Score = 38.9 bits (89), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 55/133 (41%), Gaps = 17/133 (12%)

Query: 14  VFMWGYL-PGALPQRSPILSPLVVRLP--LTVGSAWRDVCGGGCGFAMAISDSRKLITWG 70
           VF WGY   G +   S    P+  R+   L         CG  C  +MA+ D+ ++  WG
Sbjct: 182 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMC--SMAVVDTGEVYVWG 239

Query: 71  STDDLGQSYVTSGKHGEIPEPFPLPTEASI--VKAAAGWAHCVAVTEGGEVYTWGWKECV 128
                G   +  G  G  P P  +     I   + A G+AH + +T+ G++Y WG     
Sbjct: 240 YN---GNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWG----- 291

Query: 129 PSGRVFGDLSTGT 141
                +G L TG 
Sbjct: 292 --ANSYGQLGTGN 302


>gi|348683616|gb|EGZ23431.1| hypothetical protein PHYSODRAFT_258036 [Phytophthora sojae]
          Length = 1271

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 85/314 (27%), Positives = 139/314 (44%), Gaps = 19/314 (6%)

Query: 172 TSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGR 231
           TS+G        E  K   +++A     + +    ++S    L        IA ++ G +
Sbjct: 513 TSTGDVYSYGDNEDKKAAAVTIATNANSADNDYTRSISKELALEKALHRTTIAMISCGAQ 572

Query: 232 HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGS---V 288
           H+LA++D G+++ WG G +G+LG G  +R  + P  +  +        S  L        
Sbjct: 573 HSLAITDAGELYTWGSGEDGRLGHGD-MRDRAVPRKVMSLLRESVASASCGLGDNKWRDT 631

Query: 289 NSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD-DELSPNCVS 347
             +  GF   G  +  + CG   +A +   G + T+G    GQCG G  D D++ P CV 
Sbjct: 632 PHQIVGF-PQGTRISNVVCGWNFTAALDRQGNIFTWGKTGEGQCGLGYVDKDQVVPRCVE 690

Query: 348 SL----LGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSL 403
            L     G     VA G  HT+ +++ G++Y++G  ++GQL     + +     L AP  
Sbjct: 691 KLREVAAGSAAVDVACGYTHTVVLTASGELYSWGLGEYGQLA----RVQLPSDALCAPD- 745

Query: 404 ENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNV 462
                  V CGA H+    +   +F WG N YG  GLG   +++ P ++          V
Sbjct: 746 ---QLTRVYCGAFHSIATTEKRVMFAWGLNSYGACGLGHTANKDKPERIDCFSSQTELVV 802

Query: 463 ACGWWHTLLLAVPP 476
           ACG  +T+ L V P
Sbjct: 803 ACGHKYTIALEVDP 816



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 81/294 (27%), Positives = 123/294 (41%), Gaps = 58/294 (19%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P  V+L  G  I  VA GG H L L+  G V+ +G   + +    +          I   
Sbjct: 488 PKQVSLLNGQPIVQVACGGEHLLYLTSTGDVYSYGDNEDKKAAAVT----------IATN 537

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
            +S   D + ++S+  +  E    R     +  I+CG +HS  ITDAG L T+G G  G+
Sbjct: 538 ANSADNDYTRSISK-ELALEKALHRTT---IAMISCGAQHSLAITDAGELYTWGSGEDGR 593

Query: 332 CGQGSTDDELSPNCVSSLL----------------------------GIQIEGVAAGLWH 363
            G G   D   P  V SLL                            G +I  V  G   
Sbjct: 594 LGHGDMRDRAVPRKVMSLLRESVASASCGLGDNKWRDTPHQIVGFPQGTRISNVVCGWNF 653

Query: 364 TICISSDGDVYAFGGNQFGQLGTGG-DQAETLPRLLDAPSLENVHSKS----VSCGARHT 418
           T  +   G+++ +G    GQ G G  D+ + +PR ++   L  V + S    V+CG  HT
Sbjct: 654 TAALDRQGNIFTWGKTGEGQCGLGYVDKDQVVPRCVE--KLREVAAGSAAVDVACGYTHT 711

Query: 419 AVIADDGKVFCWGWNKYGQLGLGDVIDRNI--PSQVTIEGCVPRNVACGWWHTL 470
            V+   G+++ WG  +YGQL    +    +  P Q+T        V CG +H++
Sbjct: 712 VVLTASGELYSWGLGEYGQLARVQLPSDALCAPDQLT-------RVYCGAFHSI 758


>gi|413926238|gb|AFW66170.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 442

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 119/412 (28%), Positives = 181/412 (43%), Gaps = 49/412 (11%)

Query: 85  HGEIPEPFP-LPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGL 143
           H  +P P P LP   S V  AAG  H +AV+  GEV+ WG  +    GR        T  
Sbjct: 53  HAYVPTPVPSLPPSVSAV--AAGHYHSLAVSAAGEVWAWGRNDEGQLGRGLHS-PRNTWS 109

Query: 144 DKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSS 203
           + ++     +   + VS    VS      + G+DG       SKR ++ L K   E+   
Sbjct: 110 NAELVRGLENVQVQAVSASGVVS-----AAIGSDGSLWVWGRSKRGQLGLGKDIVEA--- 161

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG-LGSRIRMV 262
                 A P  V       I  V+ G  H++AL+  G+++GWGY   G+LG +G   R +
Sbjct: 162 ------AVPSKVKALASYDIVKVSFGWGHSMALTKDGKLFGWGYSENGRLGEMGQSTRAL 215

Query: 263 SSPHPIPCIESSYGKDRSAALSR---GSVNSEG-------PGF--RVPGNYVKGIACGGR 310
           S+   I      Y      A+ +     + SE        P     V    V  ++CG  
Sbjct: 216 SAEEYIGKTVDKYSSVMLEAVEKMVEEKIQSEDDMPIIWEPSLVHEVSRLEVSDVSCGLD 275

Query: 311 HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI--- 367
           HS ++   G +L+ G   YGQ G+ +   EL P  +S     +   ++A + H++ +   
Sbjct: 276 HSLILCSDGIVLSGGDNTYGQLGRKAGPPELLPVGMS----YRPFSMSASVGHSLALCYT 331

Query: 368 SSDGD------VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
           +++G       + ++G N   QLG      E +P L+D+ S E +   S S G  H+  +
Sbjct: 332 TTEGTAGVETGLLSWGWNCSSQLGRSSQ--EDIPALVDSLSRERL--VSASAGRVHSVAL 387

Query: 422 ADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLL 472
              G+V+ WG  + G+LGLG  ID   P  V T+EG     VA G  H LLL
Sbjct: 388 TSKGEVWTWGSGRNGRLGLGSSIDEAAPCLVDTLEGVEVLQVAAGMDHNLLL 439



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 56/159 (35%), Positives = 82/159 (51%), Gaps = 5/159 (3%)

Query: 318 AGALLTFGWGLYGQCGQGS-TDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAF 376
           AG +  FG   +G  GQ         P  V SL    +  VAAG +H++ +S+ G+V+A+
Sbjct: 31  AGVVYGFGDNSHGAVGQPPPAAHAYVPTPVPSL-PPSVSAVAAGHYHSLAVSAAGEVWAW 89

Query: 377 GGNQFGQLGTG-GDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKY 435
           G N  GQLG G      T         LENV  ++VS     +A I  DG ++ WG +K 
Sbjct: 90  GRNDEGQLGRGLHSPRNTWSNAELVRGLENVQVQAVSASGVVSAAIGSDGSLWVWGRSKR 149

Query: 436 GQLGLG-DVIDRNIPSQV-TIEGCVPRNVACGWWHTLLL 472
           GQLGLG D+++  +PS+V  +       V+ GW H++ L
Sbjct: 150 GQLGLGKDIVEAAVPSKVKALASYDIVKVSFGWGHSMAL 188



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 88/204 (43%), Gaps = 33/204 (16%)

Query: 240 GQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPG 299
           G V+G+G    G +G          P P+P +  S                         
Sbjct: 32  GVVYGFGDNSHGAVGQPPPAAHAYVPTPVPSLPPS------------------------- 66

Query: 300 NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG---STDDELSPNCVSSLLGIQIEG 356
             V  +A G  HS  ++ AG +  +G    GQ G+G     +   +   V  L  +Q++ 
Sbjct: 67  --VSAVAAGHYHSLAVSAAGEVWAWGRNDEGQLGRGLHSPRNTWSNAELVRGLENVQVQA 124

Query: 357 VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAE-TLPRLLDAPSLENVHSKSVSCGA 415
           V+A    +  I SDG ++ +G ++ GQLG G D  E  +P  + A  L +     VS G 
Sbjct: 125 VSASGVVSAAIGSDGSLWVWGRSKRGQLGLGKDIVEAAVPSKVKA--LASYDIVKVSFGW 182

Query: 416 RHTAVIADDGKVFCWGWNKYGQLG 439
            H+  +  DGK+F WG+++ G+LG
Sbjct: 183 GHSMALTKDGKLFGWGYSENGRLG 206



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 83/352 (23%), Positives = 134/352 (38%), Gaps = 83/352 (23%)

Query: 59  AISDSRKLITWGSTDD----LGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVT 114
           AI     L  WG +      LG+  V +     +P          IVK + GW H +A+T
Sbjct: 134 AIGSDGSLWVWGRSKRGQLGLGKDIVEAA----VPSKVKALASYDIVKVSFGWGHSMALT 189

Query: 115 EGGEVYTWGWKECVPSGRVFGDLSTGT-GLDKDVF-----ERQSSFLTEQVSPRSQVSRS 168
           + G+++ WG+ E   +GR  G++   T  L  + +     ++ SS + E V    +    
Sbjct: 190 KDGKLFGWGYSE---NGR-LGEMGQSTRALSAEEYIGKTVDKYSSVMLEAVEKMVEEKIQ 245

Query: 169 SGGTSSGTDGRGSGEEGSKRRRISLAKQTAESS---------------SSGDENLSAF-- 211
           S       D      E S    +S  + +  S                S GD        
Sbjct: 246 S------EDDMPIIWEPSLVHEVSRLEVSDVSCGLDHSLILCSDGIVLSGGDNTYGQLGR 299

Query: 212 ----PCLVTLNPGVRIATVAAGGRHTLALSDIGQ---------VWGWGYGGEGQLGLGSR 258
               P L+ +    R  +++A   H+LAL              +  WG+    QLG    
Sbjct: 300 KAGPPELLPVGMSYRPFSMSASVGHSLALCYTTTEGTAGVETGLLSWGWNCSSQLGR--- 356

Query: 259 IRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDA 318
               SS   IP +  S  ++R  + S G V                      HS  +T  
Sbjct: 357 ----SSQEDIPALVDSLSRERLVSASAGRV----------------------HSVALTSK 390

Query: 319 GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
           G + T+G G  G+ G GS+ DE +P  V +L G+++  VAAG+ H + + ++
Sbjct: 391 GEVWTWGSGRNGRLGLGSSIDEAAPCLVDTLEGVEVLQVAAGMDHNLLLVAE 442


>gi|449685467|ref|XP_002154638.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
           [Hydra magnipapillata]
          Length = 1679

 Score =  102 bits (254), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 88/285 (30%), Positives = 136/285 (47%), Gaps = 36/285 (12%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR--------IRMVSSPHPIPCIES 273
           +I++      HTLAL+  G V+ WG G  G+LG G+         IR V     I  I  
Sbjct: 423 QISSSKGSDSHTLALTKNGVVYSWGDGEFGKLGHGNVATQKLPKVIRGVFKNQIITFI-- 480

Query: 274 SYGKDRSAALSR-GSVNSEGPG------------FRVPG-----NYVKGIACGGRHSAVI 315
           S G   SAA+++ G + + G G             RVP      +    +A G  H+ V+
Sbjct: 481 SAGSRHSAAITKDGDLYTWGEGEHGRLGHGDSSIQRVPTLVRSIDAASQVAAGCSHTVVL 540

Query: 316 T-DAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVY 374
           + D   + TFG G  G+ G G+T  E  P  V +L GI+I+ +AAG   +I ++  G +Y
Sbjct: 541 SKDEMTVWTFGAGDNGKLGHGNTKMEYYPKIVDALKGIRIKKIAAGTQCSIALTWTGFIY 600

Query: 375 AFGGNQFGQLGTG-GDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWN 433
            +G      LG G  D    LP++++  SL +VH   +S G  H   ++ D +V+ WG N
Sbjct: 601 VWGCGPC--LGVGAADAVHLLPKIVE--SLRDVHIVDISLGDCHCLALSADHEVYSWGNN 656

Query: 434 KYGQLGLGDVIDR-NIPSQV-TIEGCVPRNVACGWWHTLLLAVPP 476
             GQ GLG      ++P++V  ++G     ++ G  H+     PP
Sbjct: 657 NMGQCGLGHCFTPVSLPTKVLALDGIKIEQISTGTSHSFAWTTPP 701



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 52/163 (31%), Positives = 85/163 (52%), Gaps = 12/163 (7%)

Query: 317 DAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGI-----QIEGVAAGLWHTICISSDG 371
           D G+L   G G +G+ G G   D  S  C+  L        QI        HT+ ++ +G
Sbjct: 385 DDGSLHACGKGSHGKLGLG---DSSSKQCLHKLNLFNQNIDQISSSKGSDSHTLALTKNG 441

Query: 372 DVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWG 431
            VY++G  +FG+LG G    + LP+++     +N     +S G+RH+A I  DG ++ WG
Sbjct: 442 VVYSWGDGEFGKLGHGNVATQKLPKVIRG-VFKNQIITFISAGSRHSAAITKDGDLYTWG 500

Query: 432 WNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLA 473
             ++G+LG GD   + +P+ V +I+      VA G  HT++L+
Sbjct: 501 EGEHGRLGHGDSSIQRVPTLVRSIDAA--SQVAAGCSHTVVLS 541



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 75/324 (23%), Positives = 131/324 (40%), Gaps = 69/324 (21%)

Query: 52  GGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVK-AAAGWA 108
           G     +A++ +  + +WG  +   LG   V + K   +P+      +  I+   +AG  
Sbjct: 429 GSDSHTLALTKNGVVYSWGDGEFGKLGHGNVATQK---LPKVIRGVFKNQIITFISAGSR 485

Query: 109 HCVAVTEGGEVYTWGWKECVPSGRV-FGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSR 167
           H  A+T+ G++YTWG  E    GR+  GD S           ++   L   +   SQV+ 
Sbjct: 486 HSAAITKDGDLYTWGEGE---HGRLGHGDSSI----------QRVPTLVRSIDAASQVAA 532

Query: 168 SSGGTSSGTDGR------GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGV 221
               T   +         G+G+ G                  G+  +  +P +V    G+
Sbjct: 533 GCSHTVVLSKDEMTVWTFGAGDNGKL--------------GHGNTKMEYYPKIVDALKGI 578

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
           RI  +AAG + ++AL+  G ++ WG G    LG+G+      + H +P I  S       
Sbjct: 579 RIKKIAAGTQCSIALTWTGFIYVWGCG--PCLGVGA----ADAVHLLPKIVES------- 625

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL 341
                          +   ++  I+ G  H   ++    + ++G    GQCG G     +
Sbjct: 626 ---------------LRDVHIVDISLGDCHCLALSADHEVYSWGNNNMGQCGLGHCFTPV 670

Query: 342 S-PNCVSSLLGIQIEGVAAGLWHT 364
           S P  V +L GI+IE ++ G  H+
Sbjct: 671 SLPTKVLALDGIKIEQISTGTSHS 694


>gi|403370898|gb|EJY85318.1| hypothetical protein OXYTRI_16821 [Oxytricha trifallax]
          Length = 821

 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 122/452 (26%), Positives = 188/452 (41%), Gaps = 76/452 (16%)

Query: 26  QRSPILSPLVVR-LPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDD--LGQSYVTS 82
           QR  I  P   R L L   +  + +CG    F +  S    + +WGS  +  LG SY   
Sbjct: 76  QRGMIRDPRPERVLALEKYNINQVICGSDQTFCITKSPENHVFSWGSNQNAKLGHSYYKP 135

Query: 83  GKHGEIPEPFPLPTEASIVKA---------AAGWAHCVA-VTEGGEVYTWGW-------- 124
             +        +  + +IVKA         + G +H  A   E G VY WG         
Sbjct: 136 SPNNVSSSSIQIVKQPTIVKALENQKIDGLSCGTSHSFAWSNESGLVYGWGLGLNGRLGN 195

Query: 125 --KECVPSGRVFGDLSTGTGLDKDVFE----RQSSFLTEQVSPRSQVSRSSGGT------ 172
             +  V   +V   L     +   V +       +    Q+ P+++   S          
Sbjct: 196 ENEGVVQEPQVLECLKIAMEIKMKVLQISCGENHTLALIQMPPQNEGETSQNKLFVWGNN 255

Query: 173 ---SSGTDGR--GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVA 227
                G D +  G+ E+    R IS+  Q        D +          N   ++  V 
Sbjct: 256 DKLQLGMDNQADGNNEDMQSAREISVPHQLDPDPFQHDTD--------NKNYSNQLIGVH 307

Query: 228 AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGS 287
           A   ++ AL+  G V+ WG G  G+LG    + +   P P                    
Sbjct: 308 ASYYYSAALTSNGNVYTWGSGEFGRLGY---MDIKKQPQP-------------------K 345

Query: 288 VNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVS 347
           V  E  GF+V       I+ G  H A IT+ G + ++G G+ GQ G GS  +E     VS
Sbjct: 346 VLKELTGFQVT-----RISLGYYHGAAITEQGQVFSWGRGINGQLGHGSVLNEDQVRPVS 400

Query: 348 SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVH 407
           +L  I I  ++ G  HT+ +++ G+VY++GG Q GQLG G    ++LP  +   +LE+ +
Sbjct: 401 ALQNIHIIDISCGESHTLALTNKGEVYSWGGGQLGQLGHGDFLRQSLP--IKVANLED-N 457

Query: 408 SKSVSCGARHTAVIADDGKVFCWGWNKYGQLG 439
              +S G RH++ + DDGK+F WG N+YGQLG
Sbjct: 458 IAQISAGKRHSSALTDDGKLFTWGSNEYGQLG 489



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 130/289 (44%), Gaps = 47/289 (16%)

Query: 210 AFPCL-VTLNPGVRIATVAAGGRHTLALSDI----------GQVWGWGYGGEGQLGLGSR 258
              CL + +   +++  ++ G  HTLAL  +           +++ WG   + QLG+ ++
Sbjct: 206 VLECLKIAMEIKMKVLQISCGENHTLALIQMPPQNEGETSQNKLFVWGNNDKLQLGMDNQ 265

Query: 259 I----------RMVSSPH---PIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGI 305
                      R +S PH   P P    +  K+ S                   N + G+
Sbjct: 266 ADGNNEDMQSAREISVPHQLDPDPFQHDTDNKNYS-------------------NQLIGV 306

Query: 306 ACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTI 365
                +SA +T  G + T+G G +G+ G      +  P  +  L G Q+  ++ G +H  
Sbjct: 307 HASYYYSAALTSNGNVYTWGSGEFGRLGYMDIKKQPQPKVLKELTGFQVTRISLGYYHGA 366

Query: 366 CISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDG 425
            I+  G V+++G    GQLG G    E   R + A  L+N+H   +SCG  HT  + + G
Sbjct: 367 AITEQGQVFSWGRGINGQLGHGSVLNEDQVRPVSA--LQNIHIIDISCGESHTLALTNKG 424

Query: 426 KVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLA 473
           +V+ WG  + GQLG GD + +++P +V  +E  + + ++ G  H+  L 
Sbjct: 425 EVYSWGGGQLGQLGHGDFLRQSLPIKVANLEDNIAQ-ISAGKRHSSALT 472



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 110/270 (40%), Gaps = 52/270 (19%)

Query: 70  GSTDDLGQSYVTSGKHGEIPEPFPLPTEAS-----IVKAAAGWAHCVAVTEGGEVYTWGW 124
           G+ +D+  +   S  H   P+PF   T+       ++   A + +  A+T  G VYTWG 
Sbjct: 268 GNNEDMQSAREISVPHQLDPDPFQHDTDNKNYSNQLIGVHASYYYSAALTSNGNVYTWGS 327

Query: 125 KECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEE 184
            E    GR+ G +         V +  + F         QV+R S G   G      G+ 
Sbjct: 328 GEF---GRL-GYMDIKKQPQPKVLKELTGF---------QVTRISLGYYHGAAITEQGQV 374

Query: 185 GSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWG 244
            S  R I+   Q    S   ++ +     L      + I  ++ G  HTLAL++ G+V+ 
Sbjct: 375 FSWGRGIN--GQLGHGSVLNEDQVRPVSAL----QNIHIIDISCGESHTLALTNKGEVYS 428

Query: 245 WGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKG 304
           WG G  GQLG G  +R  S P  +  +E +                           +  
Sbjct: 429 WGGGQLGQLGHGDFLRQ-SLPIKVANLEDN---------------------------IAQ 460

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
           I+ G RHS+ +TD G L T+G   YGQ G+
Sbjct: 461 ISAGKRHSSALTDDGKLFTWGSNEYGQLGR 490



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 44/190 (23%), Positives = 72/190 (37%), Gaps = 29/190 (15%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL--------------SPNCVS 347
           +  + CG   +  IT +     F WG       G +  +                P  V 
Sbjct: 96  INQVICGSDQTFCITKSPENHVFSWGSNQNAKLGHSYYKPSPNNVSSSSIQIVKQPTIVK 155

Query: 348 SLLGIQIEGVAAGLWHTICISSD-GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLE-- 404
           +L   +I+G++ G  H+   S++ G VY +G    G+LG   +     P++L+   +   
Sbjct: 156 ALENQKIDGLSCGTSHSFAWSNESGLVYGWGLGLNGRLGNENEGVVQEPQVLECLKIAME 215

Query: 405 -NVHSKSVSCGARHTAVI----------ADDGKVFCWGWNKYGQLGLGDVID-RNIPSQV 452
             +    +SCG  HT  +              K+F WG N   QLG+ +  D  N   Q 
Sbjct: 216 IKMKVLQISCGENHTLALIQMPPQNEGETSQNKLFVWGNNDKLQLGMDNQADGNNEDMQS 275

Query: 453 TIEGCVPRNV 462
             E  VP  +
Sbjct: 276 AREISVPHQL 285


>gi|302822159|ref|XP_002992739.1| hypothetical protein SELMODRAFT_430894 [Selaginella moellendorffii]
 gi|300139480|gb|EFJ06220.1| hypothetical protein SELMODRAFT_430894 [Selaginella moellendorffii]
          Length = 982

 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 60/171 (35%), Positives = 95/171 (55%), Gaps = 4/171 (2%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V  IACG RH+A++T  G +  +G    G+ G G   D   P  V +L G+  E VA G 
Sbjct: 282 VSSIACGSRHAALVTKQGDVFCWGEEYGGRLGHGIDVDVSEPQLVQALAGVNTELVACGD 341

Query: 362 WHTICISSDGDVYAFGGNQF--GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
           +HT  ++  G++Y +G +    G +G     +  +P+ + +P LE V   S++CGA HTA
Sbjct: 342 FHTCAVTLSGELYTWGADAQSGGLVGHSNPVSHWMPKRMSSP-LEGVRISSIACGAWHTA 400

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
           +++  G++F +G   +G LG GD  +  IP +V +++G      ACG WHT
Sbjct: 401 LVSSAGQLFTFGDGTFGVLGHGDKRNLAIPKEVESLKGLKTVRAACGIWHT 451



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 121/268 (45%), Gaps = 42/268 (15%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           GVRI+++A G  HT  +S  GQ++ +G G  G LG G + R ++ P  +  ++       
Sbjct: 386 GVRISSIACGAWHTALVSSAGQLFTFGDGTFGVLGHGDK-RNLAIPKEVESLK------- 437

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITD------------AGALLTFGWG 327
                              G      ACG  H+A + +            +G L T+G G
Sbjct: 438 -------------------GLKTVRAACGIWHTAAVVEVIVGYSSATSCSSGKLFTWGDG 478

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG 387
              + G G  + +L P CV++L+      VA G   T+ +++ G V+  G   +GQLG  
Sbjct: 479 DKYRLGHGDKEQKLVPTCVAALVDYNFRQVACGHSLTVALTTSGRVFTMGSTIYGQLGNP 538

Query: 388 GDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
               + +P ++D   L     + + CGA H A ++   +++ WG    G+LG GDV DR 
Sbjct: 539 KADGK-VPGMVDG-ELARTFVEEIGCGAHHVAALSSKTEIYTWGKGANGRLGHGDVEDRT 596

Query: 448 IPSQV-TIEGCVPRNVACGWWHTLLLAV 474
            P+ V  +     + VACG   T ++ +
Sbjct: 597 APTLVEALRDKQVKTVACGSSFTAVICL 624



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 77/268 (28%), Positives = 122/268 (45%), Gaps = 47/268 (17%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           ++++A G RH   ++  G V+ WG    G+LG G  +  VS P  +  +           
Sbjct: 282 VSSIACGSRHAALVTKQGDVFCWGEEYGGRLGHGIDVD-VSEPQLVQAL----------- 329

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY--GQCGQGSTDDE 340
                VN+E             +ACG  H+  +T +G L T+G      G  G  +    
Sbjct: 330 ---AGVNTE------------LVACGDFHTCAVTLSGELYTWGADAQSGGLVGHSNPVSH 374

Query: 341 LSPNCVSS-LLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLD 399
             P  +SS L G++I  +A G WHT  +SS G ++ FG   FG LG G  +   +P+ ++
Sbjct: 375 WMPKRMSSPLEGVRISSIACGAWHTALVSSAGQLFTFGDGTFGVLGHGDKRNLAIPKEVE 434

Query: 400 APSLENVHSKSVSCGARHTAVIAD------------DGKVFCWGWNKYGQLGLGDVIDRN 447
             SL+ + +   +CG  HTA + +             GK+F WG     +LG GD   + 
Sbjct: 435 --SLKGLKTVRAACGIWHTAAVVEVIVGYSSATSCSSGKLFTWGDGDKYRLGHGDKEQKL 492

Query: 448 IPSQV-TIEGCVPRNVACGWWHTLLLAV 474
           +P+ V  +     R VACG  H+L +A+
Sbjct: 493 VPTCVAALVDYNFRQVACG--HSLTVAL 518



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 79/276 (28%), Positives = 116/276 (42%), Gaps = 41/276 (14%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P LV    GV    VA G  HT A++  G+++ WG   +   GL      VS  H +P  
Sbjct: 323 PQLVQALAGVNTELVACGDFHTCAVTLSGELYTWGADAQSG-GLVGHSNPVS--HWMP-- 377

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
                K  S+ L               G  +  IACG  H+A+++ AG L TFG G +G 
Sbjct: 378 -----KRMSSPLE--------------GVRISSIACGAWHTALVSSAGQLFTFGDGTFGV 418

Query: 332 CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI------------SSDGDVYAFGGN 379
            G G   +   P  V SL G++    A G+WHT  +             S G ++ +G  
Sbjct: 419 LGHGDKRNLAIPKEVESLKGLKTVRAACGIWHTAAVVEVIVGYSSATSCSSGKLFTWGDG 478

Query: 380 QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG 439
              +LG G  + + +P  + A  L + + + V+CG   T  +   G+VF  G   YGQLG
Sbjct: 479 DKYRLGHGDKEQKLVPTCVAA--LVDYNFRQVACGHSLTVALTTSGRVFTMGSTIYGQLG 536

Query: 440 LGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLA 473
                D  +P  V   +       + CG  H   L+
Sbjct: 537 -NPKADGKVPGMVDGELARTFVEEIGCGAHHVAALS 571



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 78/145 (53%), Gaps = 6/145 (4%)

Query: 333 GQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAE 392
           G GS  D L P  + + + + +  +A G  H   ++  GDV+ +G    G+LG G D   
Sbjct: 261 GAGSRVDSLVPKALQAAVVLDVSSIACGSRHAALVTKQGDVFCWGEEYGGRLGHGIDVDV 320

Query: 393 TLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKY--GQLGLGDVIDRNIPS 450
           + P+L+ A  L  V+++ V+CG  HT  +   G+++ WG +    G +G  + +   +P 
Sbjct: 321 SEPQLVQA--LAGVNTELVACGDFHTCAVTLSGELYTWGADAQSGGLVGHSNPVSHWMPK 378

Query: 451 QVT--IEGCVPRNVACGWWHTLLLA 473
           +++  +EG    ++ACG WHT L++
Sbjct: 379 RMSSPLEGVRISSIACGAWHTALVS 403


>gi|66358878|ref|XP_626617.1| RCC1 domain containing protein [Cryptosporidium parvum Iowa II]
 gi|46228329|gb|EAK89228.1| RCC1 domain containing protein [Cryptosporidium parvum Iowa II]
          Length = 1878

 Score =  102 bits (254), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 76/260 (29%), Positives = 115/260 (44%), Gaps = 42/260 (16%)

Query: 211 FPCLVTLNPGVRIATVAAGGRHTLAL-----SDIGQVWGWGYGGEGQLGLGSRIRMVSSP 265
           FP  V     + +  V+ G  HT  L        G+V+  G G  G+LG         + 
Sbjct: 83  FPMKVNFFSALEVFQVSCGYSHTAVLVKGISEASGRVYTMGLGDRGRLGYTRGYTEFGNE 142

Query: 266 H-----------PIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAV 314
           H           P+PCI +      +A +SR                   I+CG  HS  
Sbjct: 143 HDKNDLNESWYTPVPCIVNF---PFNAKISR-------------------ISCGANHSLA 180

Query: 315 ITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS-LLGIQIEGVAAGLWHTICISSDGDV 373
           ++D+G +  +G G YG  G G  +D  SP  + +     ++  +AAG  H++C + DG V
Sbjct: 181 LSDSGLVFAWGIGQYGCLGTGELNDVYSPVKIEAGPTDKKVLHIAAGARHSLCCNEDGQV 240

Query: 374 YAFGGNQFGQLGTGGDQA-ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGW 432
           +A+G N  G+LGTGG    +T+P  +   SL   H   V+ G  H+  I   G ++ WG 
Sbjct: 241 FAWGSNSNGRLGTGGSYGMKTVPTQIK--SLSQYHITLVAAGESHSGCIDSFGYIYTWGN 298

Query: 433 NKYGQLGLGDVIDRNIPSQV 452
              G+LG G   D NIP ++
Sbjct: 299 GGSGKLGHGTQSDCNIPRRI 318



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 74/265 (27%), Positives = 114/265 (43%), Gaps = 35/265 (13%)

Query: 188 RRRISLAKQTAESSSSGDEN------LSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQ 241
           R R+   +   E  +  D+N       +  PC+V      +I+ ++ G  H+LALSD G 
Sbjct: 127 RGRLGYTRGYTEFGNEHDKNDLNESWYTPVPCIVNFPFNAKISRISCGANHSLALSDSGL 186

Query: 242 VWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNY 301
           V+ WG G  G LG G  +  V SP  I                       GP        
Sbjct: 187 VFAWGIGQYGCLGTG-ELNDVYSPVKI---------------------EAGP----TDKK 220

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ-GSTDDELSPNCVSSLLGIQIEGVAAG 360
           V  IA G RHS    + G +  +G    G+ G  GS   +  P  + SL    I  VAAG
Sbjct: 221 VLHIAAGARHSLCCNEDGQVFAWGSNSNGRLGTGGSYGMKTVPTQIKSLSQYHITLVAAG 280

Query: 361 LWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
             H+ CI S G +Y +G    G+LG G      +PR ++   + ++    ++ GA ++  
Sbjct: 281 ESHSGCIDSFGYIYTWGNGGSGKLGHGTQSDCNIPRRIEG--ISSLPFVQLTLGAFNSMA 338

Query: 421 IADDGKVFCWGWNKYGQLGLGDVID 445
           ++  G+V+ WG  ++  + L   ID
Sbjct: 339 LSQSGEVYIWGAKQHEIISLPTKID 363



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 71/272 (26%), Positives = 118/272 (43%), Gaps = 40/272 (14%)

Query: 219 PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
           P   +  +A G  HTL L   G ++ WG    GQLG+ +R R           +S  G  
Sbjct: 486 PSWSVRQIACGTSHTLLLVYGGTIFAWGDNKYGQLGVDTRRR-----------KSQNGDK 534

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
             + L+  +       F  P   ++ +ACG  HS      G   ++G G  GQ G G+  
Sbjct: 535 NESFLNEPTEIK----FSEP---IRRVACGSWHSLCCDIKGNCFSWGRGDRGQLGTGAIR 587

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISS-------------DGDVYAFGGNQFGQLG 385
           +   P  + +L  + IE VA G  ++ CI +              GD++ +G    G+LG
Sbjct: 588 NLYEPAGIVTLKNV-IE-VAGGELYSACIVACITTGNKDLDTINSGDLWIWGDGDLGKLG 645

Query: 386 TGGDQAETLPRLLDAPSLENVHSK--SVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDV 443
            G      L   + AP   N+ +    V+ G+ HT V+   G++  WG   YG+LG    
Sbjct: 646 LGD---HVLKSCIAAPRHLNLGTPIIKVALGSSHTLVLTASGELITWGAGYYGRLGTNST 702

Query: 444 IDRNIPSQV--TIEGCVPRNVACGWWHTLLLA 473
              + P ++   I+G    ++A G +H++ ++
Sbjct: 703 KSHSNPIKIRFPIKGVQIVDIAVGSYHSMAVS 734



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 79/301 (26%), Positives = 129/301 (42%), Gaps = 45/301 (14%)

Query: 170 GGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAF--PCLVTLNPGVRIATVA 227
           GGT         G+ G   RR          S +GD+N S    P  +  +  +R   VA
Sbjct: 506 GGTIFAWGDNKYGQLGVDTRR--------RKSQNGDKNESFLNEPTEIKFSEPIR--RVA 555

Query: 228 AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI----PCIESSYGKDRSAAL 283
            G  H+L     G  + WG G  GQLG G+ IR +  P  I      IE + G+  SA +
Sbjct: 556 CGSWHSLCCDIKGNCFSWGRGDRGQLGTGA-IRNLYEPAGIVTLKNVIEVAGGELYSACI 614

Query: 284 SRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                             V  I  G +    I ++G L  +G G  G+ G G   D +  
Sbjct: 615 ------------------VACITTGNKDLDTI-NSGDLWIWGDGDLGKLGLG---DHVLK 652

Query: 344 NCVSSL----LGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLD 399
           +C+++     LG  I  VA G  HT+ +++ G++  +G   +G+LGT   ++ + P  + 
Sbjct: 653 SCIAAPRHLNLGTPIIKVALGSSHTLVLTASGELITWGAGYYGRLGTNSTKSHSNPIKIR 712

Query: 400 APSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVP 459
            P ++ V    ++ G+ H+  ++  G ++ WG      L   DV+   I +++     VP
Sbjct: 713 FP-IKGVQIVDIAVGSYHSMAVSSLGDLWVWG-KAENVLSEKDVLTPYIFAKLESPSGVP 770

Query: 460 R 460
           R
Sbjct: 771 R 771



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 72/295 (24%), Positives = 121/295 (41%), Gaps = 56/295 (18%)

Query: 99  SIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVF-ERQSSFLTE 157
           S+ + A G +H + +  GG ++ WG  +       +G L   T   K    ++  SFL E
Sbjct: 489 SVRQIACGTSHTLLLVYGGTIFAWGDNK-------YGQLGVDTRRRKSQNGDKNESFLNE 541

Query: 158 --QVSPRSQVSRSSGGT--SSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPC 213
             ++     + R + G+  S   D +G+     +  R  L        +    NL     
Sbjct: 542 PTEIKFSEPIRRVACGSWHSLCCDIKGNCFSWGRGDRGQLG-------TGAIRNLYEPAG 594

Query: 214 LVTLNPGVRIA----------TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
           +VTL   + +A               G   L   + G +W WG G  G+LGLG  +    
Sbjct: 595 IVTLKNVIEVAGGELYSACIVACITTGNKDLDTINSGDLWIWGDGDLGKLGLGDHV---- 650

Query: 264 SPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLT 323
                  ++S     R   L               G  +  +A G  H+ V+T +G L+T
Sbjct: 651 -------LKSCIAAPRHLNL---------------GTPIIKVALGSSHTLVLTASGELIT 688

Query: 324 FGWGLYGQCGQGSTDDELSPNCVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
           +G G YG+ G  ST    +P  +   + G+QI  +A G +H++ +SS GD++ +G
Sbjct: 689 WGAGYYGRLGTNSTKSHSNPIKIRFPIKGVQIVDIAVGSYHSMAVSSLGDLWVWG 743



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 55/201 (27%), Positives = 88/201 (43%), Gaps = 24/201 (11%)

Query: 294 GFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCG---------QGSTDDELSPN 344
           G ++P   V+ IACG  H+ ++   G +  +G   YGQ G          G  ++     
Sbjct: 482 GSQIPSWSVRQIACGTSHTLLLVYGGTIFAWGDNKYGQLGVDTRRRKSQNGDKNESFLNE 541

Query: 345 CVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ-------AETLPRL 397
                    I  VA G WH++C    G+ +++G    GQLGTG  +         TL  +
Sbjct: 542 PTEIKFSEPIRRVACGSWHSLCCDIKGNCFSWGRGDRGQLGTGAIRNLYEPAGIVTLKNV 601

Query: 398 LDAPSLENVHSKSVSC---GARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNI---PSQ 451
           ++    E   +  V+C   G +    I + G ++ WG    G+LGLGD + ++    P  
Sbjct: 602 IEVAGGELYSACIVACITTGNKDLDTI-NSGDLWIWGDGDLGKLGLGDHVLKSCIAAPRH 660

Query: 452 VTIEGCVPRNVACGWWHTLLL 472
           + + G     VA G  HTL+L
Sbjct: 661 LNL-GTPIIKVALGSSHTLVL 680



 Score = 45.4 bits (106), Expect = 0.065,   Method: Composition-based stats.
 Identities = 56/245 (22%), Positives = 95/245 (38%), Gaps = 47/245 (19%)

Query: 33  PLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQ-SYVTSGKHGEIPEP 91
           P +V  P     + R  CG     ++A+SDS  +  WG    +GQ   + +G+  ++  P
Sbjct: 157 PCIVNFPFNAKIS-RISCGAN--HSLALSDSGLVFAWG----IGQYGCLGTGELNDVYSP 209

Query: 92  FPL---PTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVF 148
             +   PT+  ++  AAG  H +   E G+V+ WG      +GR+    S G        
Sbjct: 210 VKIEAGPTDKKVLHIAAGARHSLCCNEDGQVFAWGSNS---NGRLGTGGSYGMKTVPTQI 266

Query: 149 ERQSSFLTEQVSPRSQVS---------RSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAE 199
           +  S +    V+     S          + G   SG  G G+  + +  RRI        
Sbjct: 267 KSLSQYHITLVAAGESHSGCIDSFGYIYTWGNGGSGKLGHGTQSDCNIPRRI-------- 318

Query: 200 SSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
                 E +S+ P             +  G  +++ALS  G+V+ WG      + L ++I
Sbjct: 319 ------EGISSLP----------FVQLTLGAFNSMALSQSGEVYIWGAKQHEIISLPTKI 362

Query: 260 RMVSS 264
               S
Sbjct: 363 DAFDS 367


>gi|440792449|gb|ELR13671.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein, partial [Acanthamoeba castellanii
           str. Neff]
          Length = 297

 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 88/263 (33%), Positives = 124/263 (47%), Gaps = 22/263 (8%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  VAAG  H+LAL+  G+V  WG  G  Q+G       +         E    + +   
Sbjct: 25  VVQVAAGWSHSLALAASGKVLCWGSSGFNQMGC------LYEEEDAAGTEEEAARSQQQL 78

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
           + R  V +   G       V  IA G RHSA++T  G LLT G G +G+ G G      +
Sbjct: 79  VKRRLVPAPMAGLH-SSIVVTCIAAGMRHSALVTQEGHLLTLGHGKFGELGHGDLATRST 137

Query: 343 PNCVSSLLG--IQIEGVAAGLWHTICISSDGDVYAFGGNQFGQL---GTGGDQAETL--- 394
           P  V+ L    +++  VA G  HT+C+++ G           ++   GT   + ET    
Sbjct: 138 PTLVAHLAESRLRVAQVACGQKHTVCLTAGGVPPTSSSKPKPRMIIRGTRHRRGETCHST 197

Query: 395 PRLLDAPSLENVHSKSVSCGARHTAVIADDGK-VFCWGWNKYGQLGLGDVIDRNIPSQVT 453
           P+ +D P+  N  SK V CG   T ++ADDG  +F  G N YGQLGLGD  DR  P+++ 
Sbjct: 198 PQPVDVPA--NKVSKIV-CGWSFTLIVADDGSSLFGLGRNNYGQLGLGDTTDRPRPTRIP 254

Query: 454 IEG---CVPRNVACGWWHTLLLA 473
            E         + CG  HTLLLA
Sbjct: 255 SEAWNDAPIDKIVCGCEHTLLLA 277



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 77/358 (21%), Positives = 139/358 (38%), Gaps = 83/358 (23%)

Query: 89  PEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVF 148
           P P  +    ++V+ AAGW+H +A+   G+V  WG              S+G      ++
Sbjct: 14  PTPQRVVLPETVVQVAAGWSHSLALAASGKVLCWG--------------SSGFNQMGCLY 59

Query: 149 ERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENL 208
           E + +  TE+ + RSQ                  ++  KRR +                 
Sbjct: 60  EEEDAAGTEEEAARSQ------------------QQLVKRRLVPAP-------------- 87

Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
                +  L+  + +  +AAG RH+  ++  G +   G+G  G+LG G  +   S+P  +
Sbjct: 88  -----MAGLHSSIVVTCIAAGMRHSALVTQEGHLLTLGHGKFGELGHGD-LATRSTPTLV 141

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL 328
             +  S  +                        V  +ACG +H+  +T  G   T     
Sbjct: 142 AHLAESRLR------------------------VAQVACGQKHTVCLTAGGVPPTSSSKP 177

Query: 329 YGQCGQGSTDDELSPNCVSSLLGI-----QIEGVAAGLWHTICISSDGD-VYAFGGNQFG 382
             +     T       C S+   +     ++  +  G   T+ ++ DG  ++  G N +G
Sbjct: 178 KPRMIIRGTRHRRGETCHSTPQPVDVPANKVSKIVCGWSFTLIVADDGSSLFGLGRNNYG 237

Query: 383 QLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL 440
           QLG G       P  + + +  +     + CG  HT ++A  G++F WGWN++G LG+
Sbjct: 238 QLGLGDTTDRPRPTRIPSEAWNDAPIDKIVCGCEHTLLLAG-GQLFSWGWNEHGNLGV 294


>gi|348685793|gb|EGZ25608.1| hypothetical protein PHYSODRAFT_297207 [Phytophthora sojae]
          Length = 529

 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 110/405 (27%), Positives = 171/405 (42%), Gaps = 41/405 (10%)

Query: 66  LITWGSTDDLGQSYVTSGKHGEIPEPFP------LPTEASIVKAAAGWAHCVAVTEGGEV 119
           L+T+GS D     +   G+  ++   FP      L  +  I + A G  H   +T  GEV
Sbjct: 109 LLTFGSGDCGQLGHGVEGEDEDLMVKFPRVVRPLLKLKLKIARVACGGLHSAVITTAGEV 168

Query: 120 YTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGR 179
           YTWG  +    GR  GD +T + +D         F  EQ +   Q+      T+  T   
Sbjct: 169 YTWGCSDDGALGRD-GDENTPSKVD--------GFGPEQATA-VQIVGGDCHTAVVTLAG 218

Query: 180 GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDI 239
                G  R +       A S+ +  +     P L+       IA V  G    LA ++ 
Sbjct: 219 RVYMWGCYRDKEGKQWCDAPSAKAAFKQKQTRPFLIKALD--NIADVKCGNAFNLARTND 276

Query: 240 GQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRV 297
           G+V+ WG G  GQLG  + + ++     + +  +   + + +   L +          ++
Sbjct: 277 GRVYSWGLGEMGQLGRKVDAEMKDADGEYKVEMVYKEHLQPKLVMLGKD---------QL 327

Query: 298 PGNYVKGIACGGRHSAV-ITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG 356
           P   VK I CG  HS   ++  G L T G   YGQ G GSTD+      V  L    +  
Sbjct: 328 P--VVKSIGCGSYHSMFALSSNGYLYTCGLNNYGQLGIGSTDNCSELQLVEDLSFKNVAF 385

Query: 357 VAAGLWHTICISSDGDVYAFGGNQFGQLG-----TGGDQAETLPRLLDAPSLENVHS--- 408
           V  G  H++ +++DGDVY FG    GQLG     + GD  +  P+ +  P  +N  S   
Sbjct: 386 VDGGEHHSVVLTNDGDVYTFGRADSGQLGMLDTCSTGDFKDR-PQKVTIPKPKNSGSNVV 444

Query: 409 KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT 453
           + ++ G+ H   + +   +F WG+    QLG G   D N P Q+ 
Sbjct: 445 RMIATGSNHALALTESDAIFSWGYGDMLQLGHGLDQDENKPRQLN 489



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 85/336 (25%), Positives = 135/336 (40%), Gaps = 74/336 (22%)

Query: 205 DENLSA-FPCLVT--LNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLG----- 256
           DE+L   FP +V   L   ++IA VA GG H+  ++  G+V+ WG   +G LG       
Sbjct: 128 DEDLMVKFPRVVRPLLKLKLKIARVACGGLHSAVITTAGEVYTWGCSDDGALGRDGDENT 187

Query: 257 ------------------------SRIRMVSSPHPIPCIESSYGK---DRSAALSRGSVN 289
                                   + + +    +   C     GK   D  +A +     
Sbjct: 188 PSKVDGFGPEQATAVQIVGGDCHTAVVTLAGRVYMWGCYRDKEGKQWCDAPSAKAAFKQK 247

Query: 290 SEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST------------ 337
              P      + +  + CG   +   T+ G + ++G G  GQ G+               
Sbjct: 248 QTRPFLIKALDNIADVKCGNAFNLARTNDGRVYSWGLGEMGQLGRKVDAEMKDADGEYKV 307

Query: 338 ----DDELSPNCVSSLLGIQ----IEGVAAGLWHTI-CISSDGDVYAFGGNQFGQLGTGG 388
                + L P  V  +LG      ++ +  G +H++  +SS+G +Y  G N +GQLG G 
Sbjct: 308 EMVYKEHLQPKLV--MLGKDQLPVVKSIGCGSYHSMFALSSNGYLYTCGLNNYGQLGIGS 365

Query: 389 DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL------GD 442
               +  +L++  S +NV    V  G  H+ V+ +DG V+ +G    GQLG+      GD
Sbjct: 366 TDNCSELQLVEDLSFKNV--AFVDGGEHHSVVLTNDGDVYTFGRADSGQLGMLDTCSTGD 423

Query: 443 VIDRNIPSQVTIE------GCVPRNVACGWWHTLLL 472
             DR  P +VTI         V R +A G  H L L
Sbjct: 424 FKDR--PQKVTIPKPKNSGSNVVRMIATGSNHALAL 457



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 109/429 (25%), Positives = 174/429 (40%), Gaps = 80/429 (18%)

Query: 33  PLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPF 92
           P VVR  L +      V  GG   A+ I+ + ++ TWG +DD        G+ G+   P 
Sbjct: 136 PRVVRPLLKLKLKIARVACGGLHSAV-ITTAGEVYTWGCSDD-----GALGRDGDENTPS 189

Query: 93  PL----PTEASIVKAAAGWAHCVAVTEGGEVYTWG-WKECVPSGRVFGDLSTGTGLDKDV 147
            +    P +A+ V+   G  H   VT  G VY WG +++    G+ + D  +     K  
Sbjct: 190 KVDGFGPEQATAVQIVGGDCHTAVVTLAGRVYMWGCYRD--KEGKQWCDAPSA----KAA 243

Query: 148 FERQSS--FLTEQVSPRSQVSRSSGGTSSGT-DGR----GSGEEGSKRRRISLAKQTAES 200
           F+++ +  FL + +   + V   +    + T DGR    G GE G   R++    + A+ 
Sbjct: 244 FKQKQTRPFLIKALDNIADVKCGNAFNLARTNDGRVYSWGLGEMGQLGRKVDAEMKDADG 303

Query: 201 SSSGD----ENLSAFPCLVTLNPGVR--IATVAAGGRHTL-ALSDIGQVWGWGYGGEGQL 253
               +    E+L   P LV L       + ++  G  H++ ALS  G ++  G    GQL
Sbjct: 304 EYKVEMVYKEHLQ--PKLVMLGKDQLPVVKSIGCGSYHSMFALSSNGYLYTCGLNNYGQL 361

Query: 254 GLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSA 313
           G+GS            C E    +D    LS  +V            +V G   G  HS 
Sbjct: 362 GIGSTDN---------CSELQLVED----LSFKNV-----------AFVDG---GEHHSV 394

Query: 314 VITDAGALLTFGWGLYGQCGQGST----DDELSPNCVS-----SLLGIQIEGVAAGLWHT 364
           V+T+ G + TFG    GQ G   T    D +  P  V+     +     +  +A G  H 
Sbjct: 395 VLTNDGDVYTFGRADSGQLGMLDTCSTGDFKDRPQKVTIPKPKNSGSNVVRMIATGSNHA 454

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLD-----------APSLENVHSKSVSC 413
           + ++    ++++G     QLG G DQ E  PR L+                      +  
Sbjct: 455 LALTESDAIFSWGYGDMLQLGHGLDQDENKPRQLNWSNATYGKEGKNKKFGEAEILQIEA 514

Query: 414 GARHTAVIA 422
           G +H+AV+A
Sbjct: 515 GGQHSAVLA 523


>gi|291408963|ref|XP_002720777.1| PREDICTED: regulator of chromosome condensation (RCC1) and BTB
           (POZ) domain containing protein 1 [Oryctolagus
           cuniculus]
          Length = 531

 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 80/270 (29%), Positives = 129/270 (47%), Gaps = 31/270 (11%)

Query: 203 SGDENLSAFPCLVTLNPGVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +GD   +  P  +    G +I +++ G G H L  ++ G V+ WG+ G  QLG G+  + 
Sbjct: 56  TGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQG 115

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
           ++   PI    +   K                        V  +ACG  HS V+   G +
Sbjct: 116 IA---PIQVCTNLLIKQ-----------------------VVEVACGSHHSMVLAADGEV 149

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ-IEGVAAGLWHTICISSDGDVYAFGGNQ 380
             +G+   GQ G GST ++ +P  V++ L I+ + G+A G   ++ +  +G+VYA+G N 
Sbjct: 150 YAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYAWGYNG 209

Query: 381 FGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL 440
            GQLG G +  +  P  +   +L +V    + CG  HT  + D+G ++ WG N YGQLG 
Sbjct: 210 NGQLGLGNNGNQLTP--VRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGT 267

Query: 441 GDVIDRNIPSQVTIEG-CVPRNVACGWWHT 469
           G+  +   P+ V +E   V    AC   HT
Sbjct: 268 GNKNNLLSPAHVMVEKERVVEIAACHSAHT 297



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 68/235 (28%), Positives = 107/235 (45%), Gaps = 38/235 (16%)

Query: 203 SGDENLSAFPCLVTLNPGVR-IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +G  N    P  V  N  ++ +  VA G  H++ L+  G+V+ WGY   GQ+G GS    
Sbjct: 109 NGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMVLAADGEVYAWGYNNCGQVGSGS---- 164

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
            ++  P P               R   N       +    V GIACG   S  + D G +
Sbjct: 165 -TANQPTP---------------RKVTNC------LHIKRVVGIACGQTSSMAVLDNGEV 202

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             +G+   GQ G G+  ++L+P  V++L  + +  +  G  HT+ ++ +G +YA+G N +
Sbjct: 203 YAWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTY 262

Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSV----SCGARHT-AVIADDGKVFCWG 431
           GQLGTG          L +P+   V  + V    +C + HT A     G V+ WG
Sbjct: 263 GQLGTGNKNN------LLSPAHVMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 77/154 (50%), Gaps = 4/154 (2%)

Query: 315 ITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW-HTICISSDGDV 373
           +TD+  +  FG       G G     L P  + +L G +I+ ++ G   H +  + DG V
Sbjct: 37  VTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVV 96

Query: 374 YAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWN 433
           YA+G N + QLG G       P +    +L       V+CG+ H+ V+A DG+V+ WG+N
Sbjct: 97  YAWGHNGYSQLGNGTTNQGIAP-IQVCTNLLIKQVVEVACGSHHSMVLAADGEVYAWGYN 155

Query: 434 KYGQLGLGDVIDRNIPSQVTIEGCVPRNV--ACG 465
             GQ+G G   ++  P +VT    + R V  ACG
Sbjct: 156 NCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACG 189


>gi|63995563|gb|AAY41038.1| unknown [Homo sapiens]
          Length = 382

 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 83/258 (32%), Positives = 115/258 (44%), Gaps = 31/258 (12%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
            I  VA G  H+LALSD GQ++ WG G +GQLGL +    V+ P  I             
Sbjct: 85  HIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ------------ 132

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDE 340
                         ++    +  ++CG  H   +   G   T+G   +GQ G G     +
Sbjct: 133 --------------KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
            SP  V SL GI +  VAAG  H+  +S  G V+ +G N  GQLG   ++    P  +  
Sbjct: 179 ASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKL 238

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVP 459
              + V    +SCG  HTAV+   G VF +G    GQLG   + D   P +V  + G   
Sbjct: 239 LRTQKV--VYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEV 296

Query: 460 RNVACGWWHTLLLAVPPT 477
             +ACG  HTL   VP +
Sbjct: 297 TQIACGRQHTLAF-VPSS 313



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 138/308 (44%), Gaps = 51/308 (16%)

Query: 84  KHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGL 143
           + G  PE      +  I+  A G +H +A+++ G++++WG           G L   T  
Sbjct: 70  REGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGS-------DGQLGLMTTE 122

Query: 144 DKDVFERQSSFLTEQVSPRSQVSRSSGG---TSSGTDGRGSGEEGSKRRRISLAKQTAES 200
           D     R    L ++++ ++ +  S G     +   DG+      +   ++ L K+    
Sbjct: 123 DSVAVPR----LIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 201 SSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR 260
           +S         P  V    G+ +A VAAGG H+ ALS  G V+GWG    GQLGL     
Sbjct: 179 AS---------PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE-- 227

Query: 261 MVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA 320
                           KDR +      + ++          V  I+CG  H+AV+T +G 
Sbjct: 228 ----------------KDRESPCHVKLLRTQ---------KVVYISCGEEHTAVLTKSGG 262

Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFGGN 379
           + TFG G  GQ G  S +DE++P  V  L+G ++  +A G  HT+  + S G +YAFG  
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 380 QFGQLGTG 387
             GQLGTG
Sbjct: 323 ARGQLGTG 330



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 117/253 (46%), Gaps = 34/253 (13%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  VA GG H++ L + G+V+  G   +GQLG     R  + P  I  +           
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG---HEREGNKPEQIGALAD--------- 83

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                             ++  +ACG  HS  ++D G L ++G G  GQ G  +T+D ++
Sbjct: 84  -----------------QHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA 126

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD-QAETLPRLLDA 400
            P  +  L    I  V+ G WH + +++DG  + +G N  GQLG G +  ++  P+ +  
Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVR- 185

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVP- 459
            SLE +    V+ G  H+  ++  G VF WG N  GQLGL D  DR  P  V +      
Sbjct: 186 -SLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKV 244

Query: 460 RNVACGWWHTLLL 472
             ++CG  HT +L
Sbjct: 245 VYISCGEEHTAVL 257



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 87/348 (25%), Positives = 135/348 (38%), Gaps = 76/348 (21%)

Query: 57  AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEG 116
           ++A+SD  +L +WG+  D     +T+     +P       + +I++ + G  HC+A+   
Sbjct: 96  SLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAAD 155

Query: 117 GEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGT 176
           G+ +TWG           G L    GL K+           Q SP  Q  RS  G     
Sbjct: 156 GQFFTWGKNS-------HGQL----GLGKE--------FPSQASP--QRVRSLEGIPLAQ 194

Query: 177 DGRGSGEEGSKRRRISLA-------KQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAG 229
              G    G+    +SL+          A      DE     PC V L    ++  ++ G
Sbjct: 195 VAAG----GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCG 250

Query: 230 GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVN 289
             HT  L+  G V+ +G G  GQLG  S   M    +P   +E                 
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDS---MNDEVNPRRVLE----------------- 290

Query: 290 SEGPGFRVPGNYVKGIACGGRHS-AVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS 348
                  + G+ V  IACG +H+ A +  +G +  FG G  GQ G G T +   P+ V  
Sbjct: 291 -------LMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK- 342

Query: 349 LLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETL 394
                      G W  H+  +S+  D + +  +   Q+ +GGDQ   L
Sbjct: 343 -----------GYWAAHSGQLSARADRFKY--HIVKQIFSGGDQTFVL 377



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 62/124 (50%), Gaps = 10/124 (8%)

Query: 354 IEGVAAGLWHTICISSDGDVYAFGGNQFGQLG--TGGDQAETLPRLLDAPSLENVHSKSV 411
           ++ VA G  H++ +  DG+VY  G N  GQLG    G++ E +  L D       H   V
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQIGALADQ------HIIHV 89

Query: 412 SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR-NIPSQV-TIEGCVPRNVACGWWHT 469
           +CG  H+  ++D G++F WG    GQLGL    D   +P  +  +       V+CG WH 
Sbjct: 90  ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149

Query: 470 LLLA 473
           L LA
Sbjct: 150 LALA 153


>gi|444919547|ref|ZP_21239559.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444708350|gb|ELW49425.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 684

 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 81/245 (33%), Positives = 108/245 (44%), Gaps = 36/245 (14%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
            +   AAG  H+LAL + G VW WGY G GQLG GS   + S   P+     S G     
Sbjct: 37  EVVAAAAGSIHSLALRNDGTVWAWGYNGYGQLGNGS---LGSRAEPVQVQGLSGGVS--- 90

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL 341
                                  +  G  HS  + D G +  +G    GQ G+G+T   L
Sbjct: 91  -----------------------VDAGHYHSLAVRDDGTVWAWGDNPNGQLGEGTTTRRL 127

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
            P  V  L   ++  V AG  H++ + SDG V+A+G N  GQLG G     T  RL+  P
Sbjct: 128 VPVQVQGL--SEVVAVTAGSSHSLALRSDGTVWAWGANASGQLGEG----TTTNRLVPVP 181

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRN 461
            L      +V  G+ H+  +  DG V+ WG N  GQLG G    R +P QV + G V   
Sbjct: 182 VLGLSEVVAVEAGSSHSLALRSDGTVWAWGANASGQLGDGTTTKRLVPVQV-LSGVVAME 240

Query: 462 VACGW 466
              G+
Sbjct: 241 AGSGY 245



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 111/385 (28%), Positives = 161/385 (41%), Gaps = 54/385 (14%)

Query: 92  FPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQ 151
            P+   + +V   AG  + +AV   G V+ WG+     SG++  D  T       V    
Sbjct: 228 VPVQVLSGVVAMEAGSGYSLAVRNDGTVWAWGYNF---SGQLGDDTVTSRSTPVQVLGLS 284

Query: 152 SSFLTEQVSPRSQVSRSSGGTSS-GTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSA 210
                   S  S   RS G   + G++  G   EG+   R                   A
Sbjct: 285 EVVAVAAGSSLSLALRSDGTVWAWGSNDYGQRGEGTTSNR-------------------A 325

Query: 211 FPCLVT-LNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS--------RIRM 261
           FP     L+ GV    VAAG  H+LA+   G VW WG    GQLG G+        +++ 
Sbjct: 326 FPVQARGLSGGV---AVAAGYAHSLAVRSDGTVWAWGSNASGQLGEGTTSNRSEPVQVQG 382

Query: 262 VSSPHPIPCIESS------------YGKDRSAALSRGSVNSEGPGFRVPG-NYVKGIACG 308
           +S    +    SS            +G + S  L  G+        +V G + V  +  G
Sbjct: 383 LSGVVAVSAGASSSLAIRSDGTVWAWGSNASGQLGDGTTTDRLVPVQVQGLSGVVAVVAG 442

Query: 309 GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICIS 368
              S  + + G +  +G+  YGQ G  ++   L P  V+ L G+    VAAG  H++ + 
Sbjct: 443 TSFSLAVRNDGTVWGWGYNGYGQLGTFTSLFVLVPVQVTGLSGV--VAVAAGNLHSLAVR 500

Query: 369 SDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVF 428
           SDG V+A G N  GQLG G     + P  +    L  V   SV+ G  H+  +  DG V+
Sbjct: 501 SDGTVWALGRNDNGQLGDGSWTNRSAP--VQVTGLSGV--VSVAAGDSHSLAVRYDGSVW 556

Query: 429 CWGWNKYGQLGLGDVIDRNIPSQVT 453
            WG+N +GQLG G    R+ P QVT
Sbjct: 557 AWGYNSFGQLGDGSWFQRSAPVQVT 581



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 112/412 (27%), Positives = 169/412 (41%), Gaps = 56/412 (13%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTE--ASIVKAAAGWAHC 110
           G   ++A+     +  WGS D     Y   G+       FP+     +  V  AAG+AH 
Sbjct: 292 GSSLSLALRSDGTVWAWGSND-----YGQRGEGTTSNRAFPVQARGLSGGVAVAAGYAHS 346

Query: 111 VAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSG 170
           +AV   G V+ WG           G L  GT  ++            QV   S V   S 
Sbjct: 347 LAVRSDGTVWAWG-------SNASGQLGEGTTSNRS--------EPVQVQGLSGVVAVSA 391

Query: 171 GTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGG 230
           G SS    R  G           A  +  S   GD   +     V +     +  V AG 
Sbjct: 392 GASSSLAIRSDGTV--------WAWGSNASGQLGDGTTTDRLVPVQVQGLSGVVAVVAGT 443

Query: 231 RHTLALSDIGQVWGWGYGGEGQLGLGSRIRMV----------------SSPHPIPCIES- 273
             +LA+ + G VWGWGY G GQLG  + + ++                 + H +      
Sbjct: 444 SFSLAVRNDGTVWGWGYNGYGQLGTFTSLFVLVPVQVTGLSGVVAVAAGNLHSLAVRSDG 503

Query: 274 ---SYGKDRSAALSRGSVNSEGPGFRVPG-NYVKGIACGGRHSAVITDAGALLTFGWGLY 329
              + G++ +  L  GS  +     +V G + V  +A G  HS  +   G++  +G+  +
Sbjct: 504 TVWALGRNDNGQLGDGSWTNRSAPVQVTGLSGVVSVAAGDSHSLAVRYDGSVWAWGYNSF 563

Query: 330 GQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD 389
           GQ G GS     +P  V+ L G     VAA   +++ +  DG V+A+G N +GQLG G  
Sbjct: 564 GQLGDGSWFQRSAPVQVTGLSGR--GSVAASSDYSMAVRYDGTVWAWGFNLYGQLGDGTT 621

Query: 390 QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
            +  L  +     L  V   +V  G+ H+  +  DG V+ WG+N +GQLG G
Sbjct: 622 SSNQLVPV-QVQQLRGV--VAVEVGSSHSLALRSDGTVWTWGYNSFGQLGNG 670



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 46/124 (37%), Positives = 65/124 (52%), Gaps = 8/124 (6%)

Query: 330 GQCGQGSTDDELSPNCVSSLLGI-QIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGG 388
           GQ G G+ D+  +P  V   LG+ ++   AAG  H++ + +DG V+A+G N +GQLG G 
Sbjct: 16  GQLGDGTRDNRSTPVQV---LGLSEVVAAAAGSIHSLALRNDGTVWAWGYNGYGQLGNGS 72

Query: 389 DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNI 448
             +   P  +   S       SV  G  H+  + DDG V+ WG N  GQLG G    R +
Sbjct: 73  LGSRAEPVQVQGLS----GGVSVDAGHYHSLAVRDDGTVWAWGDNPNGQLGEGTTTRRLV 128

Query: 449 PSQV 452
           P QV
Sbjct: 129 PVQV 132



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 38/104 (36%), Positives = 55/104 (52%), Gaps = 7/104 (6%)

Query: 370 DGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFC 429
           DG V+A G N  GQLG G     + P  +    L  V   + + G+ H+  + +DG V+ 
Sbjct: 4   DGTVWAAGNNGSGQLGDGTRDNRSTP--VQVLGLSEV--VAAAAGSIHSLALRNDGTVWA 59

Query: 430 WGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
           WG+N YGQLG G +  R  P QV  + G V  +V  G +H+L +
Sbjct: 60  WGYNGYGQLGNGSLGSRAEPVQVQGLSGGV--SVDAGHYHSLAV 101


>gi|156546048|ref|XP_001600404.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Nasonia
           vitripennis]
          Length = 533

 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 84/268 (31%), Positives = 128/268 (47%), Gaps = 29/268 (10%)

Query: 192 SLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAG-GRHTLALSDIGQVWGWGYGGE 250
           +L   TA    +GD + +  P  V    G  I T A G G H LAL++ G+++ WG+ G 
Sbjct: 47  ALGSNTAGCLGTGDSHSTLHPKKVEALCGKGIKTFAYGSGPHVLALTNKGEIYSWGHNGY 106

Query: 251 GQLGLGSRIRMVS------------------SPHPIPCIES----SYGKDRSAALSRGSV 288
            +LG GS  + ++                  S H +   E     S+G++    +S G  
Sbjct: 107 CELGNGSTNQGLTPTLCLNLNEKVVTAIACGSHHSVALTEDGEVYSWGQNNCGQVSSGIS 166

Query: 289 NSEGPGFRV----PGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN 344
           +++G   +V     G  V  IACG   S  +TD G +  +G+   GQ G G+  ++LSP 
Sbjct: 167 SNQGAPRKVNSALTGKVVVSIACGQTSSMAVTDVGEVFGWGYNGVGQLGIGNYVNQLSPC 226

Query: 345 CVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLE 404
            V+ L GI IE VA G  HT+ +S +G +Y +GGN FGQLG G       P  L+   + 
Sbjct: 227 KVTGLNGIVIEKVACGYAHTLALSDEGALYVWGGNGFGQLGLGNKANACTPIKLNVTEMG 286

Query: 405 NVHSKSVSCGARHTAV-IADDGKVFCWG 431
            + S   +    H +V +   GK++ WG
Sbjct: 287 RI-SDIATLHYNHISVAMGQGGKIYMWG 313



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 80/274 (29%), Positives = 130/274 (47%), Gaps = 35/274 (12%)

Query: 207 NLSAFPCLVTLNPG----VRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +L  +P    L P     + +A V    G   L ++  G V+  G    G LG G     
Sbjct: 5   DLKNWPIFSLLEPKFISTIHMAVVYGNLGNEALIVTKDGDVYALGSNTAGCLGTGDS--- 61

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACG-GRHSAVITDAGA 320
            S+ HP         K   A   +G               +K  A G G H   +T+ G 
Sbjct: 62  HSTLHP---------KKVEALCGKG---------------IKTFAYGSGPHVLALTNKGE 97

Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
           + ++G   Y + G GST+  L+P    +L    +  +A G  H++ ++ DG+VY++G N 
Sbjct: 98  IYSWGHNGYCELGNGSTNQGLTPTLCLNLNEKVVTAIACGSHHSVALTEDGEVYSWGQNN 157

Query: 381 FGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL 440
            GQ+ +G    +  PR +++ +L      S++CG   +  + D G+VF WG+N  GQLG+
Sbjct: 158 CGQVSSGISSNQGAPRKVNS-ALTGKVVVSIACGQTSSMAVTDVGEVFGWGYNGVGQLGI 216

Query: 441 GDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLA 473
           G+ +++  P +VT + G V   VACG+ HTL L+
Sbjct: 217 GNYVNQLSPCKVTGLNGIVIEKVACGYAHTLALS 250



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 67/215 (31%), Positives = 95/215 (44%), Gaps = 47/215 (21%)

Query: 58  MAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTE 115
           +A+++  ++ +WG     +LG     S   G  P       E  +   A G  H VA+TE
Sbjct: 90  LALTNKGEIYSWGHNGYCELGNG---STNQGLTPTLCLNLNEKVVTAIACGSHHSVALTE 146

Query: 116 GGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSS- 174
            GEVY+WG   C       G +S+G   ++    + +S LT +V     VS + G TSS 
Sbjct: 147 DGEVYSWGQNNC-------GQVSSGISSNQGAPRKVNSALTGKVV----VSIACGQTSSM 195

Query: 175 -----------GTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRI 223
                      G +G G    G+   ++S                   PC VT   G+ I
Sbjct: 196 AVTDVGEVFGWGYNGVGQLGIGNYVNQLS-------------------PCKVTGLNGIVI 236

Query: 224 ATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR 258
             VA G  HTLALSD G ++ WG  G GQLGLG++
Sbjct: 237 EKVACGYAHTLALSDEGALYVWGGNGFGQLGLGNK 271


>gi|443686928|gb|ELT90046.1| hypothetical protein CAPTEDRAFT_159495 [Capitella teleta]
          Length = 446

 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 102/390 (26%), Positives = 169/390 (43%), Gaps = 41/390 (10%)

Query: 90  EPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFE 149
            P  +  +  IV+ AAG  H   +T+ G+V+T+G  +        G L   T  ++D FE
Sbjct: 88  RPALVKIDGEIVQIAAGGMHTACLTKDGKVFTFGCND-------EGALGRSTPEEEDCFE 140

Query: 150 RQSSFLTEQVSPRSQVSRSSGGTSS-GTDGRGSGEEGSKRRRISLAKQTAESSSSGDENL 208
                L  ++    Q+S     T++   DG   G    +    S+  QT ++ S      
Sbjct: 141 PSVVDLKAKIV---QISAGDSHTAALADDGELYGWGTFRDANGSIGLQTPKTRS------ 191

Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
              P  + L  G R+  VA+G  H L L++ GQ++  G   +GQLG              
Sbjct: 192 ---PTPIVLLSGQRVIKVASGDDHILCLTENGQIFSMGNADQGQLG-----------RVA 237

Query: 269 PCIESSYG-KDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWG 327
            C  +  G K  S  L+  +V+      ++       +  GG  S   TD G + ++G  
Sbjct: 238 ECFSTRGGRKGLSLLLTPAAVHC-----KLRKAKFTDVWTGGWTSFAKTDTGDIYSWGLN 292

Query: 328 LYGQCGQGSTDDELSPN-CVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
            Y Q G     +   P+ C S    +  + ++ G  HTI + ++G VY  G   +G LG 
Sbjct: 293 NYFQIGFDDMVNRYVPDRCKSFKTDLDWKDISGGQHHTIALDANGQVYTLGRKDYGVLGL 352

Query: 387 GGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR 446
           G +  E         SL++V   +V+CG+  +  +A++G V+ WG     QLG  +  D 
Sbjct: 353 GDNVTEEKSEPTAVTSLKDVKCSAVTCGSAVSLAVAENGAVYAWGMGCNQQLGQAEDDDL 412

Query: 447 NIPSQVTIEGCVPRN---VACGWWHTLLLA 473
             P+Q+  +    R+   V+ G  HT++LA
Sbjct: 413 YEPTQIISKQMETRDGIMVSAGGQHTVILA 442



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 113/283 (39%), Gaps = 44/283 (15%)

Query: 207 NLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPH 266
           +LS  P L  L    +  ++ +   H      +GQ    G G  GQLGLG  I   + P 
Sbjct: 34  DLSTKPTLNGLKKKAQKVSLVSHRSHGHV---VGQTLTIGTGDTGQLGLGEDIMDRARPA 90

Query: 267 PIP----------------CIES-----SYGKDRSAALSRGSVNSEG---PGFRVPGNYV 302
            +                 C+       ++G +   AL R +   E    P        +
Sbjct: 91  LVKIDGEIVQIAAGGMHTACLTKDGKVFTFGCNDEGALGRSTPEEEDCFEPSVVDLKAKI 150

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGS----TDDELSPNCVSSLLGIQIEGVA 358
             I+ G  H+A + D G L  +GWG + +   GS    T    SP  +  L G ++  VA
Sbjct: 151 VQISAGDSHTAALADDGEL--YGWGTF-RDANGSIGLQTPKTRSPTPIVLLSGQRVIKVA 207

Query: 359 AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL-----PRLLDAPS-----LENVHS 408
           +G  H +C++ +G +++ G    GQLG   +   T        LL  P+     L     
Sbjct: 208 SGDDHILCLTENGQIFSMGNADQGQLGRVAECFSTRGGRKGLSLLLTPAAVHCKLRKAKF 267

Query: 409 KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
             V  G   +    D G ++ WG N Y Q+G  D+++R +P +
Sbjct: 268 TDVWTGGWTSFAKTDTGDIYSWGLNNYFQIGFDDMVNRYVPDR 310



 Score = 39.7 bits (91), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 31/122 (25%), Positives = 49/122 (40%), Gaps = 5/122 (4%)

Query: 18  GYLPGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQ 77
           G L  + P+      P VV L   +          G     A++D  +L  WG+  D   
Sbjct: 126 GALGRSTPEEEDCFEPSVVDLKAKIVQ-----ISAGDSHTAALADDGELYGWGTFRDANG 180

Query: 78  SYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDL 137
           S          P P  L +   ++K A+G  H + +TE G++++ G  +    GRV    
Sbjct: 181 SIGLQTPKTRSPTPIVLLSGQRVIKVASGDDHILCLTENGQIFSMGNADQGQLGRVAECF 240

Query: 138 ST 139
           ST
Sbjct: 241 ST 242


>gi|2829910|gb|AAC00618.1| Unknown protein, contains regulator of chromosome condensation
           motifs [Arabidopsis thaliana]
          Length = 1108

 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 107/414 (25%), Positives = 176/414 (42%), Gaps = 67/414 (16%)

Query: 74  DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRV 133
           D   SY+T+     +P+P        + + A G  H   VT  GE++TWG +     GR+
Sbjct: 262 DKNASYLTTRTDVLVPKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEES---GGRL 318

Query: 134 FGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEE---GSKRRR 190
                 G G+ KDVF  +   L E ++  S V   + G         +GE    G     
Sbjct: 319 ------GHGIGKDVFHPR---LVESLTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHN 369

Query: 191 ISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGE 250
           + L    ++ S    + ++      +L  G+ +A+V+ G  HT  ++  G+++ +G G  
Sbjct: 370 VGLLGHGSDISHWIPKRIAG-----SLE-GLHVASVSCGPWHTALITSYGRLFTFGDGTF 423

Query: 251 GQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGR 310
           G LG G +   V  P  +  +                      G R        ++CG  
Sbjct: 424 GVLGHGDK-ETVQYPREVESLS---------------------GLRTIA-----VSCGVW 456

Query: 311 HSAVITD------------AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
           H+A + +            +G L T+G G   + G G  D  L P CV +L+      +A
Sbjct: 457 HTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIA 516

Query: 359 AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
            G   T+ +++ G V+  G   +GQLG      + LP L++   L +   + +SCGA H 
Sbjct: 517 CGHSLTVGLTTSGQVFTMGSTVYGQLGNLQTDGK-LPCLVE-DKLASEFVEEISCGAYHV 574

Query: 419 AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNV---ACGWWHT 469
           A +    +V+ WG    G+LG GD+ DR +P+   +E    R+V   ACG  +T
Sbjct: 575 AALTSRNEVYTWGKGANGRLGHGDLEDRKVPT--IVEALKDRHVKYIACGSNYT 626



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 82/283 (28%), Positives = 122/283 (43%), Gaps = 56/283 (19%)

Query: 212 PCLV-TLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGE--GQLGLGSRIRMVSSPHPI 268
           P LV +L     +  VA G  HT A++  G+++ WG G    G LG GS I      H I
Sbjct: 329 PRLVESLTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDI-----SHWI 383

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL 328
           P         R A    GS+          G +V  ++CG  H+A+IT  G L TFG G 
Sbjct: 384 P--------KRIA----GSLE---------GLHVASVSCGPWHTALITSYGRLFTFGDGT 422

Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI------------SSDGDVYAF 376
           +G  G G  +    P  V SL G++   V+ G+WHT  +             S G ++ +
Sbjct: 423 FGVLGHGDKETVQYPREVESLSGLRTIAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTW 482

Query: 377 GGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYG 436
           G     +LG G       P  +  P+L + +   ++CG   T  +   G+VF  G   YG
Sbjct: 483 GDGDKNRLGHGDKDPRLKPTCV--PALIDYNFHKIACGHSLTVGLTTSGQVFTMGSTVYG 540

Query: 437 QLG-------LGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           QLG       L  +++  + S+   E      ++CG +H   L
Sbjct: 541 QLGNLQTDGKLPCLVEDKLASEFVEE------ISCGAYHVAAL 577



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 72/139 (51%), Gaps = 7/139 (5%)

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D L P  + S + + +  +A G+ H   ++  G+++ +G    G+LG G  +    PRL+
Sbjct: 273 DVLVPKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRLV 332

Query: 399 DAPSLENVHSKS-VSCGARHTAVIADDGKVFCW--GWNKYGQLGLGDVIDRNIPSQV--T 453
           +  SL    S   V+CG  HT  +   G+++ W  G +  G LG G  I   IP ++  +
Sbjct: 333 E--SLTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGS 390

Query: 454 IEGCVPRNVACGWWHTLLL 472
           +EG    +V+CG WHT L+
Sbjct: 391 LEGLHVASVSCGPWHTALI 409



 Score = 47.8 bits (112), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 62/156 (39%), Gaps = 31/156 (19%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P L+  N       +A G   T+ L+  GQV+  G    GQLG       + +   +PC+
Sbjct: 505 PALIDYN----FHKIACGHSLTVGLTTSGQVFTMGSTVYGQLG------NLQTDGKLPCL 554

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
                                   ++   +V+ I+CG  H A +T    + T+G G  G+
Sbjct: 555 VED---------------------KLASEFVEEISCGAYHVAALTSRNEVYTWGKGANGR 593

Query: 332 CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI 367
            G G  +D   P  V +L    ++ +A G  +T  I
Sbjct: 594 LGHGDLEDRKVPTIVEALKDRHVKYIACGSNYTAAI 629


>gi|307686853|ref|ZP_07629299.1| regulator of chromosome condensation RCC1 [Clostridium
           cellulovorans 743B]
          Length = 671

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 119/249 (47%), Gaps = 40/249 (16%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
           V+AG   T+AL + G VW WG+   G LG G+                            
Sbjct: 40  VSAGNTTTIALKNDGTVWSWGFNQNGHLGDGT---------------------------- 71

Query: 286 GSVNSEGPGFRVPG-NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN 344
            + NS  P  +V G N +  I+ G  H   +   G + T+G G  G+ G G+     +P 
Sbjct: 72  -TSNSNSP-VQVKGLNGITAISAGWAHFVALKSDGTVWTWGVGYSGELGDGTNSLRTTPA 129

Query: 345 CVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLE 404
            ++ L GI    ++AG  HT+ + +DG ++++G NQ+GQLGTG      +P  L  P   
Sbjct: 130 PINGLTGI--TAISAGWNHTLALKADGTLWSWGQNQYGQLGTGNTTNSNIP--LQVPG-- 183

Query: 405 NVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVA 463
            +   S+S G  H+ VI +DG V+ WG N +GQLG G   +   P Q++ + G +  NV+
Sbjct: 184 QIGITSISSGGGHSLVIKNDGTVWSWGCNNFGQLGNGTNSNNPTPHQISGLNGII--NVS 241

Query: 464 CGWWHTLLL 472
            G  H+  L
Sbjct: 242 AGVIHSTAL 250



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 122/253 (48%), Gaps = 29/253 (11%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES--------- 273
           I  ++AG  H +AL   G VW WG G  G+LG G+   + ++P PI  +           
Sbjct: 87  ITAISAGWAHFVALKSDGTVWTWGVGYSGELGDGTN-SLRTTPAPINGLTGITAISAGWN 145

Query: 274 ------------SYGKDRSAALSRGSVNSEGPGFRVPGNY-VKGIACGGRHSAVITDAGA 320
                       S+G+++   L  G+  +     +VPG   +  I+ GG HS VI + G 
Sbjct: 146 HTLALKADGTLWSWGQNQYGQLGTGNTTNSNIPLQVPGQIGITSISSGGGHSLVIKNDGT 205

Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
           + ++G   +GQ G G+  +  +P+ +S L GI    V+AG+ H+  + SDG V+ +G N 
Sbjct: 206 VWSWGCNNFGQLGNGTNSNNPTPHQISGLNGII--NVSAGVIHSTALKSDGTVWNWGCNF 263

Query: 381 FGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL 440
            G+L  G      +P  + A  L  +   +++ G   ++ I  DG  + WG N YGQLG 
Sbjct: 264 RGELANGNKIDSYIP--VQANGLNGI--IAITAGWEFSSAIKSDGTFWVWGVNDYGQLGN 319

Query: 441 GDVIDRNIPSQVT 453
           G   D   P QV+
Sbjct: 320 GSKSDVTSPMQVS 332



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 109/399 (27%), Positives = 164/399 (41%), Gaps = 66/399 (16%)

Query: 34  LVVRLPLTVGSAWRDVCGGGCGF---------AMAISDSRKLITWGSTDDLGQSYVTSGK 84
           LV+ L  TV +  + V  G  G+          +A+ +   + +WG   +    ++  G 
Sbjct: 15  LVLILTYTVTTHSQKVVAGTSGYIAVSAGNTTTIALKNDGTVWSWGFNQN---GHLGDGT 71

Query: 85  HGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLD 144
                 P  +     I   +AGWAH VA+   G V+TW                 G G  
Sbjct: 72  TSNSNSPVQVKGLNGITAISAGWAHFVALKSDGTVWTW-----------------GVGYS 114

Query: 145 KDVFERQSSFLTEQ--VSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSS 202
            ++ +  +S  T    ++  + ++  S G +     +  G         S  +       
Sbjct: 115 GELGDGTNSLRTTPAPINGLTGITAISAGWNHTLALKADG------TLWSWGQNQYGQLG 168

Query: 203 SGDENLSAFPCLVTLNPG-VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +G+   S  P  V   PG + I ++++GG H+L + + G VW WG    GQLG G+    
Sbjct: 169 TGNTTNSNIPLQV---PGQIGITSISSGGGHSLVIKNDGTVWSWGCNNFGQLGNGTNSNN 225

Query: 262 VSSPHPIP----CIESSYGKDRSAAL-SRGSVNSEGPGFR--------------VPGNYV 302
             +PH I      I  S G   S AL S G+V + G  FR              V  N +
Sbjct: 226 -PTPHQISGLNGIINVSAGVIHSTALKSDGTVWNWGCNFRGELANGNKIDSYIPVQANGL 284

Query: 303 KGI---ACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAA 359
            GI     G   S+ I   G    +G   YGQ G GS  D  SP  VSSL GI    +  
Sbjct: 285 NGIIAITAGWEFSSAIKSDGTFWVWGVNDYGQLGNGSKSDVTSPMQVSSLSGI--TAIDT 342

Query: 360 GLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           G  +T+ + +DG+++AFG N +GQLG G     T P L+
Sbjct: 343 GATYTVALKTDGNIFAFGENTYGQLGNGTTTGSTTPELV 381



 Score = 40.0 bits (92), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 3/64 (4%)

Query: 410 SVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWH 468
           +VS G   T  + +DG V+ WG+N+ G LG G   + N P QV  + G     ++ GW H
Sbjct: 39  AVSAGNTTTIALKNDGTVWSWGFNQNGHLGDGTTSNSNSPVQVKGLNGITA--ISAGWAH 96

Query: 469 TLLL 472
            + L
Sbjct: 97  FVAL 100


>gi|224495959|ref|NP_001139096.1| probable E3 ubiquitin-protein ligase HERC3 [Danio rerio]
          Length = 1046

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 81/268 (30%), Positives = 120/268 (44%), Gaps = 31/268 (11%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P LV      +I+ V+ G  H+LA+++ GQV+ WG G  GQLGLG+    V  P  I   
Sbjct: 75  PELVGALDAQKISGVSCGQAHSLAVNEQGQVFAWGAGDGGQLGLGTAEEAVRVPRLIK-- 132

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
                                   ++  + +  + CG  H   ++  G L  +G    GQ
Sbjct: 133 ------------------------KLCEHRISQVMCGNHHCIALSKDGQLFVWGENSSGQ 168

Query: 332 CGQGSTD-DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            G G  +   LSP  + SL GI +  ++AG  H+  +S  G V+ +G N  GQLG   +Q
Sbjct: 169 LGLGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQ 228

Query: 391 AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
              +P       L +     +SCG  HTA +  +G +F +G    GQLG     +  +P 
Sbjct: 229 DRAVP--CHIKFLRSQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQLGHDSTRNEPLPR 286

Query: 451 QVT-IEGCVPRNVACGWWHTLLLAVPPT 477
           +V  + G     +ACG  HTL   VP T
Sbjct: 287 RVMELMGTEVSQIACGRNHTLAF-VPST 313



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 78/193 (40%), Positives = 95/193 (49%), Gaps = 27/193 (13%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHP------IPCIESSY 275
           RI+ V  G  H +ALS  GQ++ WG    GQLGLG       SP P      IP  + S 
Sbjct: 138 RISQVMCGNHHCIALSKDGQLFVWGENSSGQLGLGKGEPSTLSPQPLKSLCGIPLTQISA 197

Query: 276 GKDRSAALS-RGSV-----NSEGP-GFR------VP-------GNYVKGIACGGRHSAVI 315
           G D S ALS  G+V     NS G  G        VP          V  I+CG  H+A +
Sbjct: 198 GGDHSFALSFSGAVFGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQKVVYISCGEEHTAAL 257

Query: 316 TDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVY 374
           T  G L TFG G  GQ G  ST +E  P  V  L+G ++  +A G  HT+  + S G +Y
Sbjct: 258 TKEGGLFTFGNGSKGQLGHDSTRNEPLPRRVMELMGTEVSQIACGRNHTLAFVPSTGLIY 317

Query: 375 AFGGNQFGQLGTG 387
           AFG N  GQLGTG
Sbjct: 318 AFGCNTQGQLGTG 330



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 114/253 (45%), Gaps = 40/253 (15%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGL---GSRIRMVSSPHPIPCIESSYGKDR 279
           +  VA G +H+L L   G V+  G    GQLG    GSR  +V                 
Sbjct: 36  LKEVACGNQHSLFLLHDGSVYTCGSNSCGQLGHDKGGSRPELV----------------- 78

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDD 339
                 G+++++          + G++CG  HS  + + G +  +G G  GQ G G+ ++
Sbjct: 79  ------GALDAQK---------ISGVSCGQAHSLAVNEQGQVFAWGAGDGGQLGLGTAEE 123

Query: 340 ELS-PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL-PRL 397
            +  P  +  L   +I  V  G  H I +S DG ++ +G N  GQLG G  +  TL P+ 
Sbjct: 124 AVRVPRLIKKLCEHRISQVMCGNHHCIALSKDGQLFVWGENSSGQLGLGKGEPSTLSPQP 183

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEG 456
           L   SL  +    +S G  H+  ++  G VF WG N  GQLGL D  DR +P  +  +  
Sbjct: 184 LK--SLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQDRAVPCHIKFLRS 241

Query: 457 CVPRNVACGWWHT 469
                ++CG  HT
Sbjct: 242 QKVVYISCGEEHT 254



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 74/312 (23%), Positives = 119/312 (38%), Gaps = 60/312 (19%)

Query: 47  RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
           + + G  CG A  +A+++  ++  WG+ D       T+ +   +P       E  I +  
Sbjct: 84  QKISGVSCGQAHSLAVNEQGQVFAWGAGDGGQLGLGTAEEAVRVPRLIKKLCEHRISQVM 143

Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQV----- 159
            G  HC+A+++ G+++ WG           G L  G G        + S L+ Q      
Sbjct: 144 CGNHHCIALSKDGQLFVWGENSS-------GQLGLGKG--------EPSTLSPQPLKSLC 188

Query: 160 -SPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLN 218
             P +Q+  S+GG  S          G         K +A      DE   A PC +   
Sbjct: 189 GIPLTQI--SAGGDHSFALSFSGAVFG-------WGKNSAGQLGLNDEQDRAVPCHIKFL 239

Query: 219 PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
              ++  ++ G  HT AL+  G ++ +G G +GQLG                    +   
Sbjct: 240 RSQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQLG--------------------HDST 279

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHS-AVITDAGALLTFGWGLYGQCGQGST 337
           R+  L R  +        + G  V  IACG  H+ A +   G +  FG    GQ G G  
Sbjct: 280 RNEPLPRRVM-------ELMGTEVSQIACGRNHTLAFVPSTGLIYAFGCNTQGQLGTGIR 332

Query: 338 DDELSPNCVSSL 349
               SP  VS++
Sbjct: 333 GSAKSPVPVSNI 344


>gi|380792513|gb|AFE68132.1| RCC1 and BTB domain-containing protein 2, partial [Macaca mulatta]
          Length = 369

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 60/166 (36%), Positives = 97/166 (58%), Gaps = 3/166 (1%)

Query: 309 GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS-LLGIQIEGVAAGLWHTICI 367
           G H  + T  G + T+G   Y Q G G+T+  L P  +S+ L   Q+  VA G +H++ +
Sbjct: 108 GPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVL 167

Query: 368 SSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKV 427
           +SDG+V+A+G N  GQ+G+G    + +PR +    L+N    +++CG      + D G+V
Sbjct: 168 TSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTG-CLQNKVVVTIACGQMCCMAVVDTGEV 226

Query: 428 FCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
           + WG+N  GQLGLG   ++  P +V  ++G   + VACG+ HTL+L
Sbjct: 227 YVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 272



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 73/238 (30%), Positives = 120/238 (50%), Gaps = 30/238 (12%)

Query: 220 GVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
           G +IA+++ G G H +  +  G+V+ WG+    QLG G+     ++   +PC  S+   +
Sbjct: 97  GKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT-----TNHGLVPCQISTNLSN 151

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
           +                      V  +ACG  HS V+T  G +  +G+   GQ G GST 
Sbjct: 152 KQ---------------------VIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTV 190

Query: 339 DELSPNCVSSLLGIQIE-GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
           ++  P  V+  L  ++   +A G    + +   G+VY +G N  GQLG G    +  P  
Sbjct: 191 NQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCR 250

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
           + A  L+ +  + V+CG  HT V+ D+G+V+ WG N YGQLG G+  +++ P+ VT+E
Sbjct: 251 VAA--LQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTME 306



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 70/231 (30%), Positives = 109/231 (47%), Gaps = 30/231 (12%)

Query: 203 SGDENLSAFPCLVTLN-PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +G  N    PC ++ N    ++  VA G  H+L L+  G+V+ WGY   GQ+G GS +  
Sbjct: 133 NGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVN- 191

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
                PIP         R     +  V             V  IACG      + D G +
Sbjct: 192 ----QPIP--------RRVTGCLQNKV-------------VVTIACGQMCCMAVVDTGEV 226

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             +G+   GQ G GS+ ++ +P  V++L GI+++ VA G  HT+ ++ +G VYA+G N +
Sbjct: 227 YVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSY 286

Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           GQLGTG    ++ P  +       +  +  +C + HT A     G V+ WG
Sbjct: 287 GQLGTGNKSNQSYPTPVTMEKDRII--EIAACHSTHTSAAKTQGGHVYMWG 335



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 3/105 (2%)

Query: 370 DGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFC 429
           + +++  G N  G LG G  Q+   PR LD+ S + + S S   G  H  +   +G+VF 
Sbjct: 64  NDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIASLSYGSGP-HIVLATTEGEVFT 122

Query: 430 WGWNKYGQLGLGDVIDRNIPSQVTIEGCVPR--NVACGWWHTLLL 472
           WG N Y QLG G      +P Q++      +   VACG +H+L+L
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVL 167



 Score = 39.7 bits (91), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 55/132 (41%), Gaps = 17/132 (12%)

Query: 14  VFMWGYL-PGALPQRSPILSPLVVRLP--LTVGSAWRDVCGGGCGFAMAISDSRKLITWG 70
           VF WGY   G +   S +  P+  R+   L         CG  C   MA+ D+ ++  WG
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMC--CMAVVDTGEVYVWG 230

Query: 71  STDDLGQSYVTSGKHGEIPEPFPLPTEASI--VKAAAGWAHCVAVTEGGEVYTWGWKECV 128
                G   +  G  G  P P  +     I   + A G+AH + +T+ G+VY WG     
Sbjct: 231 YN---GNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG----- 282

Query: 129 PSGRVFGDLSTG 140
                +G L TG
Sbjct: 283 --ANSYGQLGTG 292


>gi|358419997|ref|XP_003584389.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Bos
           taurus]
          Length = 538

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 57/170 (33%), Positives = 93/170 (54%), Gaps = 2/170 (1%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           ++CG  H+A+ T    L  FG   +GQ G GS      P C+ +L   +++ VA G  HT
Sbjct: 85  LSCGDEHTAITTGNNKLFMFGSNNWGQLGLGSKATVNKPTCIKALKPEKVKFVACGRNHT 144

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           + ++  G VYA GGN  GQLG G     +   L+   + ++   K +S G+  +A + +D
Sbjct: 145 LILTGGGQVYATGGNNEGQLGLGDTDERSAFHLISFFTSQH-KIKQLSAGSNTSAALTED 203

Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAV 474
           G++F WG N  GQ+GL ++ +  +P QVTI G     ++CG++H+  +  
Sbjct: 204 GELFMWGDNSEGQIGLQNITNICVPHQVTI-GKPISWISCGYYHSAFVTT 252



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 74/266 (27%), Positives = 122/266 (45%), Gaps = 37/266 (13%)

Query: 213 CLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIE 272
           C+  L P  ++  VA G  HTL L+  GQV+  G   EGQLGLG                
Sbjct: 125 CIKALKPE-KVKFVACGRNHTLILTGGGQVYATGGNNEGQLGLGDT-------------- 169

Query: 273 SSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQC 332
                D  +A    S       F    + +K ++ G   SA +T+ G L  +G    GQ 
Sbjct: 170 -----DERSAFHLIS-------FFTSQHKIKQLSAGSNTSAALTEDGELFMWGDNSEGQI 217

Query: 333 GQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ-- 390
           G  +  +   P+ V+  +G  I  ++ G +H+  ++++G++Y FG  + G+LG       
Sbjct: 218 GLQNITNICVPHQVT--IGKPISWISCGYYHSAFVTTEGELYTFGEPESGKLGLPPKLLV 275

Query: 391 AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
              +P+L+   S + +    V+CG  HT V+ +   V+ +G  ++GQLGLG         
Sbjct: 276 NHKVPQLVPGISEKVIQ---VACGGGHTVVLTEKA-VYTFGLGQFGQLGLGTFTFETSEP 331

Query: 451 QV--TIEGCVPRNVACGWWHTLLLAV 474
           +V  +++     +V CG  HT L+ V
Sbjct: 332 KVIESVKDKKISHVCCGENHTALITV 357



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 96/223 (43%), Gaps = 48/223 (21%)

Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
           SAF  +       +I  ++AG   + AL++ G+++ WG   EGQ+GL   I  +  PH +
Sbjct: 173 SAFHLISFFTSQHKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGL-QNITNICVPHQV 231

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL 328
                                         G  +  I+CG  HSA +T  G L TFG   
Sbjct: 232 TI----------------------------GKPISWISCGYYHSAFVTTEGELYTFGEPE 263

Query: 329 YGQCGQGSTDDELSPNCVSSL--------LGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
            G+ G       L P  + +         +  ++  VA G  HT+ ++    VY FG  Q
Sbjct: 264 SGKLG-------LPPKLLVNHKVPQLVPGISEKVIQVACGGGHTVVLTEKA-VYTFGLGQ 315

Query: 381 FGQLGTGGDQAET-LPRLLDAPSLENVHSKSVSCGARHTAVIA 422
           FGQLG G    ET  P++++  S+++     V CG  HTA+I 
Sbjct: 316 FGQLGLGTFTFETSEPKVIE--SVKDKKISHVCCGENHTALIT 356



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 52/114 (45%), Gaps = 25/114 (21%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL----DAPSLENVHSKSVSCGARHTAVIA 422
           +   G V+ FG  +F         AE +P       D P        S+SCG  HTA+  
Sbjct: 53  VPDSGAVFTFGKTKF---------AENMPSKFWFKRDIPI-------SLSCGDEHTAITT 96

Query: 423 DDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRN---VACGWWHTLLLA 473
            + K+F +G N +GQLGLG     N P+   I+   P     VACG  HTL+L 
Sbjct: 97  GNNKLFMFGSNNWGQLGLGSKATVNKPT--CIKALKPEKVKFVACGRNHTLILT 148


>gi|300794901|ref|NP_001179920.1| RCC1 and BTB domain-containing protein 2 [Bos taurus]
 gi|296481887|tpg|DAA24002.1| TPA: regulator of chromosome condensation (RCC1) and BTB (POZ)
           domain containing protein 2 [Bos taurus]
          Length = 527

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 63/176 (35%), Positives = 102/176 (57%), Gaps = 7/176 (3%)

Query: 303 KGIAC----GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS-LLGIQIEGV 357
           K IAC     G H  + T  G + T+G   Y Q G G+T+  L P  +S+ L   Q+  V
Sbjct: 74  KKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEV 133

Query: 358 AAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARH 417
           A G +H++ ++SDG+V+A+G N  GQ+G+G    + +PR +    L++    +++CG   
Sbjct: 134 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTG-CLQSKVVVNIACGQMC 192

Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLL 472
           +  + + G+VF WG+N  GQLGLG   ++  P +V  ++G   + VACG+ HTL+L
Sbjct: 193 SMAVVNTGEVFVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 248



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 117/238 (49%), Gaps = 30/238 (12%)

Query: 220 GVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
           G +IA ++ G G H +  +  G+V+ WG+    QLG G+                     
Sbjct: 73  GKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTT-------------------- 112

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
            +A L    +++      +    V  +ACG  HS V+T  G +  +G+   GQ G GST 
Sbjct: 113 -NAGLVPYHIST-----NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTA 166

Query: 339 DELSPNCVSSLLGIQIE-GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
           ++  P  V+  L  ++   +A G   ++ + + G+V+ +G N  GQLG G    +  P  
Sbjct: 167 NQPIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGSSGNQPTP-- 224

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
               +L+ +  + V+CG  HT V+ D+G+V+ WG N YGQLG G+  +++ P+ V +E
Sbjct: 225 CRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVVE 282



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 114/238 (47%), Gaps = 44/238 (18%)

Query: 203 SGDENLSAFPCLVTLN-PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +G  N    P  ++ N    ++  VA G  H+L L+  G+V+ WGY   GQ+G GS    
Sbjct: 109 NGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---- 164

Query: 262 VSSPHPIP-----CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVIT 316
            ++  PIP     C++S                            V  IACG   S  + 
Sbjct: 165 -TANQPIPRRVTGCLQS--------------------------KVVVNIACGQMCSMAVV 197

Query: 317 DAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAF 376
           + G +  +G+   GQ G GS+ ++ +P  V++L GI+++ VA G  HT+ ++ +G VYA+
Sbjct: 198 NTGEVFVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAW 257

Query: 377 GGNQFGQLGTGG--DQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           G N +GQLGTG   +Q+   P +++   +  +     +C + HT A     G V+ WG
Sbjct: 258 GANSYGQLGTGNKSNQSYPTPVVVEKDRIIEI----AACHSAHTSAAKTQGGHVYMWG 311



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 79/187 (42%), Gaps = 34/187 (18%)

Query: 91  PFPLPTEAS---IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDV 147
           P+ + T  S   +++ A G  H + +T  GEV+ WG+          G + +G+  ++ +
Sbjct: 118 PYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS-------GQVGSGSTANQPI 170

Query: 148 FERQSSFLTEQVSPRSQVSRSSGGTSSGTDG------RGSGEEGSKRRRISLAKQTAESS 201
             R +  L  +V       +        T         G+G+ G                
Sbjct: 171 PRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLGL--------------G 216

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           SSG++     PC V    G+R+  VA G  HTL L+D GQV+ WG    GQLG G++   
Sbjct: 217 SSGNQ---PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQ 273

Query: 262 VSSPHPI 268
            S P P+
Sbjct: 274 -SYPTPV 279



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 15/111 (13%)

Query: 370 DGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFC 429
           + +++  G N  G LG G  Q+   PR LD+ S + +   S   G  H  +   +G+VF 
Sbjct: 40  NDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGP-HIVLATTEGEVFT 98

Query: 430 WGWNKYGQLGLGDV--------IDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           WG N Y QLG G          I  N+ ++  IE      VACG +H+L+L
Sbjct: 99  WGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIE------VACGSYHSLVL 143


>gi|413946332|gb|AFW78981.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 1009

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 66/171 (38%), Positives = 92/171 (53%), Gaps = 4/171 (2%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V+ IACG RH A+ T  G +  +G  L G+ G G+  D   P  V +L    +E VA G 
Sbjct: 245 VQQIACGYRHIALTTRQGEVFAWGEELGGRLGHGTDADISRPKLVEALAVSNVEYVACGE 304

Query: 362 WHTICISSDGDVYAFGGNQF--GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
           +HT  I++ GD+Y +G   +  G LG G   +  LP+ +  P LE V   SVSCG+ H+A
Sbjct: 305 FHTCAITASGDLYTWGDGYYNAGLLGHGAGTSHWLPKRVSGP-LEGVQVLSVSCGSWHSA 363

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
           +    GKVF +G   +G LG G+      P +V T+ G     VACG WH+
Sbjct: 364 LTTSSGKVFTFGDGTFGALGHGNRHTVAYPKEVETLSGFRTIKVACGLWHS 414



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 77/266 (28%), Positives = 119/266 (44%), Gaps = 40/266 (15%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           GV++ +V+ G  H+   +  G+V+ +G G  G LG G+R   V+ P  +  +        
Sbjct: 349 GVQVLSVSCGSWHSALTTSSGKVFTFGDGTFGALGHGNR-HTVAYPKEVETLS------- 400

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITD----------AGALLTFGWGLY 329
                         GFR     +K +ACG  HSA I +          +  L T+G G  
Sbjct: 401 --------------GFRT----IK-VACGLWHSAAIVETTNQAGVNVISRKLFTWGAGDK 441

Query: 330 GQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD 389
              G G  D  L P CV SL+      VA G   TI +S+ G V+  G +  GQLG    
Sbjct: 442 NPLGHGDKDARLVPTCVQSLIDYNFHQVACGHSMTIALSTSGHVFTMGSSSNGQLGNPKS 501

Query: 390 QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIP 449
             +    + D  + E V  + +SCG+ H AV+    +V+ WG    G+LG G V D+  P
Sbjct: 502 DGKHPTPVQDRLAGELV--EEISCGSCHVAVLTSRSEVYTWGMGANGRLGHGGVEDKKKP 559

Query: 450 SQV-TIEGCVPRNVACGWWHTLLLAV 474
           + V  ++    +++ACG   T  + +
Sbjct: 560 TLVEALKDRHVKSIACGSNFTTCICI 585



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 113/274 (41%), Gaps = 41/274 (14%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWG--YGGEGQLGLGSRIRMVSSPHPIP 269
           P LV       +  VA G  HT A++  G ++ WG  Y   G LG G+      + H +P
Sbjct: 286 PKLVEALAVSNVEYVACGEFHTCAITASGDLYTWGDGYYNAGLLGHGA-----GTSHWLP 340

Query: 270 CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
              S                  GP   + G  V  ++CG  HSA+ T +G + TFG G +
Sbjct: 341 KRVS------------------GP---LEGVQVLSVSCGSWHSALTTSSGKVFTFGDGTF 379

Query: 330 GQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGD----------VYAFGGN 379
           G  G G+      P  V +L G +   VA GLWH+  I    +          ++ +G  
Sbjct: 380 GALGHGNRHTVAYPKEVETLSGFRTIKVACGLWHSAAIVETTNQAGVNVISRKLFTWGAG 439

Query: 380 QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG 439
               LG G   A  +P  + +    N H   V+CG   T  ++  G VF  G +  GQLG
Sbjct: 440 DKNPLGHGDKDARLVPTCVQSLIDYNFH--QVACGHSMTIALSTSGHVFTMGSSSNGQLG 497

Query: 440 LGDVIDRN-IPSQVTIEGCVPRNVACGWWHTLLL 472
                 ++  P Q  + G +   ++CG  H  +L
Sbjct: 498 NPKSDGKHPTPVQDRLAGELVEEISCGSCHVAVL 531



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 74/140 (52%), Gaps = 6/140 (4%)

Query: 336 STDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLP 395
           S  D L P  + S + + ++ +A G  H    +  G+V+A+G    G+LG G D   + P
Sbjct: 227 SKADILIPKPLESDVVLDVQQIACGYRHIALTTRQGEVFAWGEELGGRLGHGTDADISRP 286

Query: 396 RLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKY--GQLGLGDVIDRNIPSQVT 453
           +L++A ++ NV  + V+CG  HT  I   G ++ WG   Y  G LG G      +P +V+
Sbjct: 287 KLVEALAVSNV--EYVACGEFHTCAITASGDLYTWGDGYYNAGLLGHGAGTSHWLPKRVS 344

Query: 454 --IEGCVPRNVACGWWHTLL 471
             +EG    +V+CG WH+ L
Sbjct: 345 GPLEGVQVLSVSCGSWHSAL 364



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 64/164 (39%), Gaps = 27/164 (16%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
           GD++    P  V          VA G   T+ALS  G V+  G    GQLG         
Sbjct: 447 GDKDARLVPTCVQSLIDYNFHQVACGHSMTIALSTSGHVFTMGSSSNGQLGNPKS----D 502

Query: 264 SPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLT 323
             HP P  +                       R+ G  V+ I+CG  H AV+T    + T
Sbjct: 503 GKHPTPVQD-----------------------RLAGELVEEISCGSCHVAVLTSRSEVYT 539

Query: 324 FGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI 367
           +G G  G+ G G  +D+  P  V +L    ++ +A G   T CI
Sbjct: 540 WGMGANGRLGHGGVEDKKKPTLVEALKDRHVKSIACGSNFTTCI 583


>gi|67617767|ref|XP_667559.1| hect domain and RLD 2 [Cryptosporidium hominis TU502]
 gi|54658712|gb|EAL37335.1| hect domain and RLD 2 [Cryptosporidium hominis]
          Length = 1878

 Score =  102 bits (253), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 77/260 (29%), Positives = 115/260 (44%), Gaps = 42/260 (16%)

Query: 211 FPCLVTLNPGVRIATVAAGGRHTLAL-----SDIGQVWGWGYGGEGQLGLGSRIRMVSSP 265
           FP  V     + +  V+ G  HT  L        G+V+  G G  G+LG         + 
Sbjct: 83  FPMKVNFFSALEVFQVSCGYSHTAVLVKGISEASGRVYTMGLGDRGRLGYTRGHTEFGNE 142

Query: 266 H-----------PIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAV 314
           H           PIPCI +      +A +SR                   I+CG  HS  
Sbjct: 143 HDKNDLNESWYTPIPCIVNF---PFNAKISR-------------------ISCGANHSLA 180

Query: 315 ITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS-LLGIQIEGVAAGLWHTICISSDGDV 373
           ++D+G +  +G G YG  G G  +D  SP  + +     ++  +AAG  H++C + DG V
Sbjct: 181 LSDSGLVFAWGIGQYGCLGTGELNDVYSPVKIEAGPTDKKVLHIAAGARHSLCCNEDGQV 240

Query: 374 YAFGGNQFGQLGTGGDQA-ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGW 432
           +A+G N  G+LGTGG    +T+P  +   SL   H   V+ G  H+  I   G ++ WG 
Sbjct: 241 FAWGSNSNGRLGTGGSYGMKTVPTQIK--SLSQYHITLVAAGESHSGCIDSFGYIYTWGN 298

Query: 433 NKYGQLGLGDVIDRNIPSQV 452
              G+LG G   D NIP ++
Sbjct: 299 GGSGKLGHGTQSDCNIPRRI 318



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 74/265 (27%), Positives = 114/265 (43%), Gaps = 35/265 (13%)

Query: 188 RRRISLAKQTAESSSSGDEN------LSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQ 241
           R R+   +   E  +  D+N       +  PC+V      +I+ ++ G  H+LALSD G 
Sbjct: 127 RGRLGYTRGHTEFGNEHDKNDLNESWYTPIPCIVNFPFNAKISRISCGANHSLALSDSGL 186

Query: 242 VWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNY 301
           V+ WG G  G LG G  +  V SP  I                       GP        
Sbjct: 187 VFAWGIGQYGCLGTG-ELNDVYSPVKI---------------------EAGP----TDKK 220

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ-GSTDDELSPNCVSSLLGIQIEGVAAG 360
           V  IA G RHS    + G +  +G    G+ G  GS   +  P  + SL    I  VAAG
Sbjct: 221 VLHIAAGARHSLCCNEDGQVFAWGSNSNGRLGTGGSYGMKTVPTQIKSLSQYHITLVAAG 280

Query: 361 LWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
             H+ CI S G +Y +G    G+LG G      +PR ++   + ++    ++ GA ++  
Sbjct: 281 ESHSGCIDSFGYIYTWGNGGSGKLGHGTQSDCNIPRRIEG--ISSLPFVQLTLGAFNSMA 338

Query: 421 IADDGKVFCWGWNKYGQLGLGDVID 445
           ++  G+V+ WG  ++  + L   ID
Sbjct: 339 LSQSGEVYIWGAKQHEIISLPTKID 363



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 70/272 (25%), Positives = 117/272 (43%), Gaps = 40/272 (14%)

Query: 219 PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
           P   +  +A G  HTL L   G ++ WG    GQLG+ +R R           +S  G  
Sbjct: 486 PSWSVRQIACGTSHTLLLVYGGTIFAWGDNKYGQLGIDTRRR-----------KSQDGDK 534

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
             + L+  +       F  P   ++ +ACG  HS      G   ++G G  GQ G G+  
Sbjct: 535 NESFLNEPTEIK----FSEP---IRRVACGSWHSLCCDIKGNCFSWGRGDRGQLGTGAIR 587

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISS-------------DGDVYAFGGNQFGQLG 385
           +   P  + +L  + IE VA G  ++ CI +              GD++ +G    G+LG
Sbjct: 588 NLYEPAGIVTLKNV-IE-VAGGELYSACIVACITTGNKDLDTINSGDLWIWGDGDLGKLG 645

Query: 386 TGGDQAETLPRLLDAPSLENVHSK--SVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDV 443
            G      L   + AP   N+ +    V+ G+ HT  +   G++  WG   YG+LG    
Sbjct: 646 LGD---HVLKSCIAAPRHLNLGTPIIKVALGSSHTLALTASGELITWGAGYYGRLGTNST 702

Query: 444 IDRNIPSQV--TIEGCVPRNVACGWWHTLLLA 473
              + P ++   I+G    ++A G +H++ ++
Sbjct: 703 KSHSNPIKIRFPIKGVQIVDIAVGSYHSMAVS 734



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 78/301 (25%), Positives = 128/301 (42%), Gaps = 45/301 (14%)

Query: 170 GGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAF--PCLVTLNPGVRIATVA 227
           GGT         G+ G   RR          S  GD+N S    P  +  +  +R   VA
Sbjct: 506 GGTIFAWGDNKYGQLGIDTRR--------RKSQDGDKNESFLNEPTEIKFSEPIR--RVA 555

Query: 228 AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI----PCIESSYGKDRSAAL 283
            G  H+L     G  + WG G  GQLG G+ IR +  P  I      IE + G+  SA +
Sbjct: 556 CGSWHSLCCDIKGNCFSWGRGDRGQLGTGA-IRNLYEPAGIVTLKNVIEVAGGELYSACI 614

Query: 284 SRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
                             V  I  G +    I ++G L  +G G  G+ G G   D +  
Sbjct: 615 ------------------VACITTGNKDLDTI-NSGDLWIWGDGDLGKLGLG---DHVLK 652

Query: 344 NCVSSL----LGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLD 399
           +C+++     LG  I  VA G  HT+ +++ G++  +G   +G+LGT   ++ + P  + 
Sbjct: 653 SCIAAPRHLNLGTPIIKVALGSSHTLALTASGELITWGAGYYGRLGTNSTKSHSNPIKIR 712

Query: 400 APSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVP 459
            P ++ V    ++ G+ H+  ++  G ++ WG      L   DV+   I +++     +P
Sbjct: 713 FP-IKGVQIVDIAVGSYHSMAVSSLGDLWVWG-KAENVLSEKDVLTPYIFAKLESPSGIP 770

Query: 460 R 460
           R
Sbjct: 771 R 771



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 71/295 (24%), Positives = 120/295 (40%), Gaps = 56/295 (18%)

Query: 99  SIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDV-FERQSSFLTE 157
           S+ + A G +H + +  GG ++ WG  +       +G L   T   K    ++  SFL E
Sbjct: 489 SVRQIACGTSHTLLLVYGGTIFAWGDNK-------YGQLGIDTRRRKSQDGDKNESFLNE 541

Query: 158 --QVSPRSQVSRSSGGT--SSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPC 213
             ++     + R + G+  S   D +G+     +  R  L        +    NL     
Sbjct: 542 PTEIKFSEPIRRVACGSWHSLCCDIKGNCFSWGRGDRGQLG-------TGAIRNLYEPAG 594

Query: 214 LVTLNPGVRIA----------TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
           +VTL   + +A               G   L   + G +W WG G  G+LGLG  +    
Sbjct: 595 IVTLKNVIEVAGGELYSACIVACITTGNKDLDTINSGDLWIWGDGDLGKLGLGDHV---- 650

Query: 264 SPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLT 323
                  ++S     R   L               G  +  +A G  H+  +T +G L+T
Sbjct: 651 -------LKSCIAAPRHLNL---------------GTPIIKVALGSSHTLALTASGELIT 688

Query: 324 FGWGLYGQCGQGSTDDELSPNCVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
           +G G YG+ G  ST    +P  +   + G+QI  +A G +H++ +SS GD++ +G
Sbjct: 689 WGAGYYGRLGTNSTKSHSNPIKIRFPIKGVQIVDIAVGSYHSMAVSSLGDLWVWG 743



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 24/201 (11%)

Query: 294 GFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCG-----QGSTDDELSPNCVSS 348
           G ++P   V+ IACG  H+ ++   G +  +G   YGQ G     + S D + + + ++ 
Sbjct: 482 GSQIPSWSVRQIACGTSHTLLLVYGGTIFAWGDNKYGQLGIDTRRRKSQDGDKNESFLNE 541

Query: 349 LLGIQ----IEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ-------AETLPRL 397
              I+    I  VA G WH++C    G+ +++G    GQLGTG  +         TL  +
Sbjct: 542 PTEIKFSEPIRRVACGSWHSLCCDIKGNCFSWGRGDRGQLGTGAIRNLYEPAGIVTLKNV 601

Query: 398 LDAPSLENVHSKSVSC---GARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNI---PSQ 451
           ++    E   +  V+C   G +    I + G ++ WG    G+LGLGD + ++    P  
Sbjct: 602 IEVAGGELYSACIVACITTGNKDLDTI-NSGDLWIWGDGDLGKLGLGDHVLKSCIAAPRH 660

Query: 452 VTIEGCVPRNVACGWWHTLLL 472
           + + G     VA G  HTL L
Sbjct: 661 LNL-GTPIIKVALGSSHTLAL 680



 Score = 45.8 bits (107), Expect = 0.051,   Method: Composition-based stats.
 Identities = 58/250 (23%), Positives = 98/250 (39%), Gaps = 49/250 (19%)

Query: 28  SPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQ-SYVTSGKHG 86
           +PI  P +V  P     + R  CG     ++A+SDS  +  WG    +GQ   + +G+  
Sbjct: 154 TPI--PCIVNFPFNAKIS-RISCGAN--HSLALSDSGLVFAWG----IGQYGCLGTGELN 204

Query: 87  EIPEPFPL---PTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGL 143
           ++  P  +   PT+  ++  AAG  H +   E G+V+ WG      +GR+    S G   
Sbjct: 205 DVYSPVKIEAGPTDKKVLHIAAGARHSLCCNEDGQVFAWGSNS---NGRLGTGGSYGMKT 261

Query: 144 DKDVFERQSSFLTEQVSPRSQVS---------RSSGGTSSGTDGRGSGEEGSKRRRISLA 194
                +  S +    V+     S          + G   SG  G G+  + +  RRI   
Sbjct: 262 VPTQIKSLSQYHITLVAAGESHSGCIDSFGYIYTWGNGGSGKLGHGTQSDCNIPRRI--- 318

Query: 195 KQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG 254
                      E +S+ P             +  G  +++ALS  G+V+ WG      + 
Sbjct: 319 -----------EGISSLP----------FVQLTLGAFNSMALSQSGEVYIWGAKQHEIIS 357

Query: 255 LGSRIRMVSS 264
           L ++I    S
Sbjct: 358 LPTKIDAFDS 367



 Score = 40.8 bits (94), Expect = 1.4,   Method: Composition-based stats.
 Identities = 54/214 (25%), Positives = 79/214 (36%), Gaps = 38/214 (17%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEA-SIVKAAAGWAHCV 111
           G    +A++ S +LITWG+    G+    S K    P     P +   IV  A G  H +
Sbjct: 673 GSSHTLALTASGELITWGA-GYYGRLGTNSTKSHSNPIKIRFPIKGVQIVDIAVGSYHSM 731

Query: 112 AVTEGGEVYTWGWKECVPSGR------VFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQV 165
           AV+  G+++ WG  E V S +      +F  L + +G+                 PR   
Sbjct: 732 AVSSLGDLWVWGKAENVLSEKDVLTPYIFAKLESPSGI-----------------PRIYS 774

Query: 166 SRSSGGTSSGTDGRGS----GEEGSKRRRIS-LAKQTAESSSSGDENLSAFPCLVTLNPG 220
             + G  S      G     G E S+   I  L       S +G   +          PG
Sbjct: 775 IHAFGDVSYAITQSGVLWIWGPENSETENIQGLETSIKIKSHTGRAEMIVL-------PG 827

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG 254
             I  V+    H + L   G+V  WG    G+LG
Sbjct: 828 NAIG-VSGSTTHHVCLLASGEVVSWGDPSRGKLG 860


>gi|224589107|ref|NP_001139174.1| probable E3 ubiquitin-protein ligase HERC4-like [Danio rerio]
          Length = 985

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 118/257 (45%), Gaps = 37/257 (14%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
             ++  +A G +H++ALS+ GQ++ WG    GQLGL     ++ SP  +  +        
Sbjct: 117 NTKVIQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQSPQHLQSL-------- 168

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY--GQCGQGST 337
                              G  V  I+ GG HS V++ +G +  FGWG    GQ G G T
Sbjct: 169 ------------------CGIPVAQISAGGNHSFVLSLSGVV--FGWGSNSAGQLGLGDT 208

Query: 338 DDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
            D   P  V SL G +   ++ G  HT  +S  G V+ FG   FGQLG    + E  PRL
Sbjct: 209 TDRFVPTIVKSLSGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRL 268

Query: 398 LDAPSLENVHSKSVSCGARHTAV-IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEG 456
           +    L       V+CG  HT V +A   +++ +G    GQLG G+ + +++P  V +  
Sbjct: 269 V--AELWGSKVSQVTCGRHHTLVLVALTNRIYSFGCGMQGQLGNGEQVKQSVPLPVLL-- 324

Query: 457 CVPRNVACGWWHTLLLA 473
             P +  C +    ++A
Sbjct: 325 --PTDCNCEFTMEKIIA 339



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 87/177 (49%), Gaps = 23/177 (12%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           ++ I CG   + ++ D G +L      Y  C             +  L   ++  +A G 
Sbjct: 81  IRSIVCGEDGAVLLADGGKVLLMDK--YTVC-----------RPLKGLDNTKVIQIACGD 127

Query: 362 WHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP----SLENVHSKSVSCGARH 417
            H++ +S+DG ++ +G N  GQLG   +QA     L+ +P    SL  +    +S G  H
Sbjct: 128 QHSVALSNDGQLFVWGENAHGQLGLRKEQA-----LIQSPQHLQSLCGIPVAQISAGGNH 182

Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLA 473
           + V++  G VF WG N  GQLGLGD  DR +P+ V ++ G    +++CG  HT  L+
Sbjct: 183 SFVLSLSGVVFGWGSNSAGQLGLGDTTDRFVPTIVKSLSGKKTVSISCGGEHTATLS 239



 Score = 43.9 bits (102), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 65/174 (37%), Gaps = 42/174 (24%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
           GD      P +V    G +  +++ GG HT  LS  G V+ +G GG GQLG  S   +  
Sbjct: 206 GDTTDRFVPTIVKSLSGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNS---LKD 262

Query: 264 SPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITD-AGALL 322
             HP    E                        + G+ V  + CG  H+ V+      + 
Sbjct: 263 EHHPRLVAE------------------------LWGSKVSQVTCGRHHTLVLVALTNRIY 298

Query: 323 TFGWGLYGQCGQGSTDDELSP---------NCVSSLLGIQIEGVAAGLWHTICI 367
           +FG G+ GQ G G    +  P         NC        +E + AG  H+  +
Sbjct: 299 SFGCGMQGQLGNGEQVKQSVPLPVLLPTDCNC-----EFTMEKIIAGEKHSFAL 347


>gi|145334779|ref|NP_001078735.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|8978337|dbj|BAA98190.1| regulator of chromosome condensation (cell cycle regulatory
           protein) like [Arabidopsis thaliana]
 gi|332008270|gb|AED95653.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 454

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 114/405 (28%), Positives = 177/405 (43%), Gaps = 59/405 (14%)

Query: 94  LPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSS 153
           LP++ S +  +AG  H +AVT  GE++ WG  +    GR+  D        K V      
Sbjct: 80  LPSDISSI--SAGHYHSLAVTSSGEIWAWGRNDEGQLGRIVIDSRDSRSEPKRVEG---- 133

Query: 154 FLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESS-SSGDENLSAFP 212
              E V+ ++  +      + G DG       SKR ++ L     E+   S  ENL+A  
Sbjct: 134 --LENVNVQAAFASGVVSAAIGDDGSLWVWGRSKRGQLGLGNGIIEARVPSRVENLAAE- 190

Query: 213 CLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIE 272
                     +  V+ G  H LAL+  G+V+GWGY  +G++G       V  P     ++
Sbjct: 191 ---------HVVKVSLGWGHALALTVDGKVFGWGYVADGRVG------NVGLPLEASLLD 235

Query: 273 SSYGKDRSAALSRGSVNSEGPGFRVP----------------------GNYVKGIACGGR 310
           S          + G +N E    +V                          V  IACG  
Sbjct: 236 SITDGSMKGHHAAGDLNLEAAEKKVVEAMSKENDMPIAWEPCLVEETCNEKVADIACGSD 295

Query: 311 HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
           HS ++   G LL+ G  +YGQ G+   D  + P  ++         +AAGL H++ I + 
Sbjct: 296 HSLILCHDGTLLSAGSNIYGQLGRSKQDLGMKPVDITE----SPISIAAGLGHSLAICNR 351

Query: 371 GD--VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVF 428
           G+  + ++G N+  QLG G  + E LPR  +    +     SVS G  H+  + + G+ +
Sbjct: 352 GERNILSWGWNRSRQLGRG--KPENLPR--EVEGFDGESPASVSAGRVHSLCVTEKGEAW 407

Query: 429 CWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
            WG  K G+LGLG   D   P  +  +EGCV + VA G+ H+L+L
Sbjct: 408 VWGCGKNGRLGLGSSSDEPEPMLLEDVEGCVLQAVA-GFDHSLIL 451



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 14/165 (8%)

Query: 321 LLTFGWGLYGQCGQGSTD------DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVY 374
           +++FG G  G  G  S+       D   P  VS+L    I  ++AG +H++ ++S G+++
Sbjct: 46  VMSFGDGNLGALGLSSSSIPGMGMDAYEPTVVSNLPS-DISSISAGHYHSLAVTSSGEIW 104

Query: 375 AFGGNQFGQLG---TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWG 431
           A+G N  GQLG        + + P+ ++   LENV+ ++       +A I DDG ++ WG
Sbjct: 105 AWGRNDEGQLGRIVIDSRDSRSEPKRVEG--LENVNVQAAFASGVVSAAIGDDGSLWVWG 162

Query: 432 WNKYGQLGLGD-VIDRNIPSQV-TIEGCVPRNVACGWWHTLLLAV 474
            +K GQLGLG+ +I+  +PS+V  +       V+ GW H L L V
Sbjct: 163 RSKRGQLGLGNGIIEARVPSRVENLAAEHVVKVSLGWGHALALTV 207



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 75/307 (24%), Positives = 120/307 (39%), Gaps = 69/307 (22%)

Query: 208 LSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHP 267
           + A+   V  N    I++++AG  H+LA++  G++W WG   EGQLG     R+V     
Sbjct: 69  MDAYEPTVVSNLPSDISSISAGHYHSLAVTSSGEIWAWGRNDEGQLG-----RIV----- 118

Query: 268 IPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWG 327
           I   +S     R   L             V   +  G+      SA I D G+L  +G  
Sbjct: 119 IDSRDSRSEPKRVEGLEN---------VNVQAAFASGVV-----SAAIGDDGSLWVWGRS 164

Query: 328 LYGQCGQGSTDDELS-PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
             GQ G G+   E   P+ V +L    +  V+ G  H + ++ DG V+ +G    G++G 
Sbjct: 165 KRGQLGLGNGIIEARVPSRVENLAAEHVVKVSLGWGHALALTVDGKVFGWGYVADGRVGN 224

Query: 387 GGDQAE-------------------------TLPRLLDAPSLE----------------N 405
            G   E                            ++++A S E                N
Sbjct: 225 VGLPLEASLLDSITDGSMKGHHAAGDLNLEAAEKKVVEAMSKENDMPIAWEPCLVEETCN 284

Query: 406 VHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACG 465
                ++CG+ H+ ++  DG +   G N YGQLG         P  +T     P ++A G
Sbjct: 285 EKVADIACGSDHSLILCHDGTLLSAGSNIYGQLGRSKQDLGMKPVDITES---PISIAAG 341

Query: 466 WWHTLLL 472
             H+L +
Sbjct: 342 LGHSLAI 348


>gi|330837197|ref|YP_004411838.1| hypothetical protein [Sphaerochaeta coccoides DSM 17374]
 gi|329749100|gb|AEC02456.1| Listeria/Bacterioides repeat-containing protein [Sphaerochaeta
           coccoides DSM 17374]
          Length = 813

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 131/293 (44%), Gaps = 43/293 (14%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES-SYGKDRSA 281
           +  V+ G  HT+ L   G +W  GY   GQLG+G      +    +  +E+ S G++ + 
Sbjct: 488 VKEVSIGTNHTMILKTDGTLWAAGYNNSGQLGVGDNDNRRTPVQVMTDVEAVSAGRNHTM 547

Query: 282 ALSR-GSVNSEGPGFR------------------------VPGNY---VKGIACGGRHSA 313
            L + G++ + G  +                          P ++   VK ++ GG H+ 
Sbjct: 548 ILKKDGTLWATGDNYNGQLGLGISGYGTEKKTPMQVKASIAPDDFMTDVKEVSAGGDHTM 607

Query: 314 VITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE------GVAAGLWHTICI 367
           ++     L   G   YG+ G  ++    + N    +  +  E        +AG ++T+ +
Sbjct: 608 LLKKDDTLWATGANYYGELGLDNSGSGTTKNTPVQVTSMNTEPSNPVTAFSAGGYYTMIL 667

Query: 368 SSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLEN---VHSKSVSCGARHTAVIADD 424
             DG ++A G N +GQLG G    +T P  + A + +N       +VS G  HT ++  D
Sbjct: 668 KKDGTLWATGRNNYGQLGDGTTTEKTTPVQVKASTADNDFMTDVAAVSVGYYHTMIVKKD 727

Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCV-----PRNVACGWWHTLLL 472
           G ++  G N YGQLG G + +RNIP QV   G V        VA G +HT+++
Sbjct: 728 GTLWATGRNNYGQLGDGTIENRNIPVQVKGSGGVGFMTDVAAVAAGTYHTMIV 780



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 108/239 (45%), Gaps = 32/239 (13%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  V+AGG HT+ L     +W  G    G+LGL +               S  G  ++  
Sbjct: 596 VKEVSAGGDHTMLLKKDDTLWATGANYYGELGLDN---------------SGSGTTKNTP 640

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
           +   S+N+E      P N V   + GG ++ ++   G L   G   YGQ G G+T ++ +
Sbjct: 641 VQVTSMNTE------PSNPVTAFSAGGYYTMILKKDGTLWATGRNNYGQLGDGTTTEKTT 694

Query: 343 P-----NCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
           P     +   +     +  V+ G +HT+ +  DG ++A G N +GQLG G  +   +P  
Sbjct: 695 PVQVKASTADNDFMTDVAAVSVGYYHTMIVKKDGTLWATGRNNYGQLGDGTIENRNIPVQ 754

Query: 398 LDAPS----LENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
           +        + +V   +V+ G  HT ++  DG ++  G N YGQLG     DR  P Q+
Sbjct: 755 VKGSGGVGFMTDV--AAVAAGTYHTMIVKKDGTLWATGRNDYGQLGDDTTTDRITPVQI 811



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 79/265 (29%), Positives = 118/265 (44%), Gaps = 39/265 (14%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           V++ TV+AGG  T+ L   G +W  G    GQLG G+     +   P+    S+   D  
Sbjct: 429 VKVKTVSAGGSSTMILKKDGSLWATGRNEWGQLGDGTTTNRTT---PVRVKASADYND-- 483

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
                         F      VK ++ G  H+ ++   G L   G+   GQ G G  D+ 
Sbjct: 484 --------------FMTD---VKEVSIGTNHTMILKTDGTLWAAGYNNSGQLGVGDNDNR 526

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG----GDQAETLPR 396
            +P  V +     +E V+AG  HT+ +  DG ++A G N  GQLG G    G + +T  +
Sbjct: 527 RTPVQVMT----DVEAVSAGRNHTMILKKDGTLWATGDNYNGQLGLGISGYGTEKKTPMQ 582

Query: 397 LLD--APSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL---GDVIDRNIPSQ 451
           +    AP       K VS G  HT ++  D  ++  G N YG+LGL   G    +N P Q
Sbjct: 583 VKASIAPDDFMTDVKEVSAGGDHTMLLKKDDTLWATGANYYGELGLDNSGSGTTKNTPVQ 642

Query: 452 VTIEGCVPRN----VACGWWHTLLL 472
           VT     P N     + G ++T++L
Sbjct: 643 VTSMNTEPSNPVTAFSAGGYYTMIL 667



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 72/171 (42%), Gaps = 26/171 (15%)

Query: 219 PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
           P   +   +AGG +T+ L   G +W  G    GQLG G+     +   P+    S+   D
Sbjct: 650 PSNPVTAFSAGGYYTMILKKDGTLWATGRNNYGQLGDGTTTEKTT---PVQVKASTADND 706

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
                           F      V  ++ G  H+ ++   G L   G   YGQ G G+ +
Sbjct: 707 ----------------FMTD---VAAVSVGYYHTMIVKKDGTLWATGRNNYGQLGDGTIE 747

Query: 339 DELSPNCVSSLLGI----QIEGVAAGLWHTICISSDGDVYAFGGNQFGQLG 385
           +   P  V    G+     +  VAAG +HT+ +  DG ++A G N +GQLG
Sbjct: 748 NRNIPVQVKGSGGVGFMTDVAAVAAGTYHTMIVKKDGTLWATGRNDYGQLG 798


>gi|18087541|gb|AAL58903.1|AF462811_1 At1g76950/F22K20_5 [Arabidopsis thaliana]
 gi|27363446|gb|AAO11642.1| At1g76950/F22K20_5 [Arabidopsis thaliana]
          Length = 1103

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 107/414 (25%), Positives = 176/414 (42%), Gaps = 67/414 (16%)

Query: 74  DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRV 133
           D   SY+T+     +P+P        + + A G  H   VT  GE++TWG +     GR+
Sbjct: 257 DKNASYLTTRTDVLVPKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEES---GGRL 313

Query: 134 FGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEE---GSKRRR 190
                 G G+ KDVF  +   L E ++  S V   + G         +GE    G     
Sbjct: 314 ------GHGIGKDVFHPR---LVESLTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHN 364

Query: 191 ISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGE 250
           + L    ++ S    + ++      +L  G+ +A+V+ G  HT  ++  G+++ +G G  
Sbjct: 365 VGLLGHGSDISHWIPKRIAG-----SLE-GLHVASVSCGPWHTALITSYGRLFTFGDGTF 418

Query: 251 GQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGR 310
           G LG G +   V  P  +  +                      G R        ++CG  
Sbjct: 419 GVLGHGDK-ETVQYPREVESLS---------------------GLRTIA-----VSCGVW 451

Query: 311 HSAVITD------------AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
           H+A + +            +G L T+G G   + G G  D  L P CV +L+      +A
Sbjct: 452 HTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIA 511

Query: 359 AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
            G   T+ +++ G V+  G   +GQLG      + LP L++   L +   + +SCGA H 
Sbjct: 512 CGHSLTVGLTTSGQVFTMGSTVYGQLGNLQTDGK-LPCLVE-DKLASEFVEEISCGAYHV 569

Query: 419 AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNV---ACGWWHT 469
           A +    +V+ WG    G+LG GD+ DR +P+   +E    R+V   ACG  +T
Sbjct: 570 AALTSRNEVYTWGKGANGRLGHGDLEDRKVPT--IVEALKDRHVKYIACGSNYT 621



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 82/283 (28%), Positives = 122/283 (43%), Gaps = 56/283 (19%)

Query: 212 PCLV-TLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGE--GQLGLGSRIRMVSSPHPI 268
           P LV +L     +  VA G  HT A++  G+++ WG G    G LG GS I      H I
Sbjct: 324 PRLVESLTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDI-----SHWI 378

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL 328
           P         R A    GS+          G +V  ++CG  H+A+IT  G L TFG G 
Sbjct: 379 P--------KRIA----GSLE---------GLHVASVSCGPWHTALITSYGRLFTFGDGT 417

Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI------------SSDGDVYAF 376
           +G  G G  +    P  V SL G++   V+ G+WHT  +             S G ++ +
Sbjct: 418 FGVLGHGDKETVQYPREVESLSGLRTIAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTW 477

Query: 377 GGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYG 436
           G     +LG G       P  +  P+L + +   ++CG   T  +   G+VF  G   YG
Sbjct: 478 GDGDKNRLGHGDKDPRLKPTCV--PALIDYNFHKIACGHSLTVGLTTSGQVFTMGSTVYG 535

Query: 437 QLG-------LGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           QLG       L  +++  + S+   E      ++CG +H   L
Sbjct: 536 QLGNLQTDGKLPCLVEDKLASEFVEE------ISCGAYHVAAL 572



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 72/139 (51%), Gaps = 7/139 (5%)

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D L P  + S + + +  +A G+ H   ++  G+++ +G    G+LG G  +    PRL+
Sbjct: 268 DVLVPKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRLV 327

Query: 399 DAPSLENVHSKS-VSCGARHTAVIADDGKVFCW--GWNKYGQLGLGDVIDRNIPSQV--T 453
           +  SL    S   V+CG  HT  +   G+++ W  G +  G LG G  I   IP ++  +
Sbjct: 328 E--SLTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGS 385

Query: 454 IEGCVPRNVACGWWHTLLL 472
           +EG    +V+CG WHT L+
Sbjct: 386 LEGLHVASVSCGPWHTALI 404



 Score = 47.4 bits (111), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 62/156 (39%), Gaps = 31/156 (19%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P L+  N       +A G   T+ L+  GQV+  G    GQLG       + +   +PC+
Sbjct: 500 PALIDYN----FHKIACGHSLTVGLTTSGQVFTMGSTVYGQLG------NLQTDGKLPCL 549

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
                                   ++   +V+ I+CG  H A +T    + T+G G  G+
Sbjct: 550 VED---------------------KLASEFVEEISCGAYHVAALTSRNEVYTWGKGANGR 588

Query: 332 CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI 367
            G G  +D   P  V +L    ++ +A G  +T  I
Sbjct: 589 LGHGDLEDRKVPTIVEALKDRHVKYIACGSNYTAAI 624


>gi|242074110|ref|XP_002446991.1| hypothetical protein SORBIDRAFT_06g026493 [Sorghum bicolor]
 gi|241938174|gb|EES11319.1| hypothetical protein SORBIDRAFT_06g026493 [Sorghum bicolor]
          Length = 1024

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 90/354 (25%), Positives = 147/354 (41%), Gaps = 91/354 (25%)

Query: 205 DENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM-VS 263
           D+   + P LV     + + ++A G  H   ++  G+V+ WG    G  G+G+++ + VS
Sbjct: 245 DDTSKSLPMLVDSTNMLDVQSIACGETHAAIITKQGEVYSWGNESSG--GIGNQVNIKVS 302

Query: 264 SPHPIPCIES------SYGKDRSAALS-------------RGSVNSEGPGFRVP------ 298
            P  +  + S      +YG   + A++              G ++        P      
Sbjct: 303 RPKLVESVASLHVKAVAYGSKHACAVTVSGELFEWGEGPHMGQLDCYANNLWFPHKLFSP 362

Query: 299 --GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEG 356
             G  V  IACG  H+A+IT +G L T+G G +G  G G T     P  V  L G +++ 
Sbjct: 363 LDGISVVKIACGPWHTAIITSSGQLYTYGDGTFGVLGHGDTQGTTRPKEVEYLKGSRVKC 422

Query: 357 VAAGLWHTICI----------SSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPS---- 402
           VA G WHT  I          S    ++ +G    G+LG    + + +P  +D+ +    
Sbjct: 423 VACGPWHTAAIVEVLSDFKSNSPRSKLFTWGDADRGKLGHADKKMKLIPTCVDSLTDYDF 482

Query: 403 -----------------------------LENVHS-----------------KSVSCGAR 416
                                        L N H+                 + +S G+ 
Sbjct: 483 IQVSCGMALTVVLSITGVVFTIGSSMHGQLGNPHADGRTVCAVEGLLKTEFVRHISSGSS 542

Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
           H AV+  +GKVF WG  K GQLGLGD ++R+ P+ V  +EG    +++CG+ +T
Sbjct: 543 HVAVLTTNGKVFTWGKGKEGQLGLGDYLNRSTPTLVDALEGRQVESISCGYNYT 596



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 108/437 (24%), Positives = 175/437 (40%), Gaps = 97/437 (22%)

Query: 14  VFMWGYLPGALPQRSPILSPLVVRLPLTVGSA-WRDVCGGGCG--FAMAISDSRKLITWG 70
           VF WG   G++         L    P+ V S    DV    CG   A  I+   ++ +WG
Sbjct: 231 VFFWGDAFGSILDYDDTSKSL----PMLVDSTNMLDVQSIACGETHAAIITKQGEVYSWG 286

Query: 71  STDDLGQSYVTSGKHGEIPEPFPLPTEASI-VKAAA-GWAHCVAVTEGGEVYTWGWKECV 128
           +    G   + +  + ++  P  + + AS+ VKA A G  H  AVT  GE++ WG     
Sbjct: 287 NESSGG---IGNQVNIKVSRPKLVESVASLHVKAVAYGSKHACAVTVSGELFEWG----- 338

Query: 129 PSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVS---------RSSGGTSSG---T 176
             G   G L        D +     F  +  SP   +S          ++  TSSG   T
Sbjct: 339 -EGPHMGQL--------DCYANNLWFPHKLFSPLDGISVVKIACGPWHTAIITSSGQLYT 389

Query: 177 DGRGS-GEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLA 235
            G G+ G  G                  GD   +  P  V    G R+  VA G  HT A
Sbjct: 390 YGDGTFGVLGH-----------------GDTQGTTRPKEVEYLKGSRVKCVACGPWHTAA 432

Query: 236 LSDI----------GQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
           + ++           +++ WG    G+LG   + +M   P    C++S    D       
Sbjct: 433 IVEVLSDFKSNSPRSKLFTWGDADRGKLGHADK-KMKLIP---TCVDSLTDYD------- 481

Query: 286 GSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNC 345
                          +++ ++CG   + V++  G + T G  ++GQ G    D   +   
Sbjct: 482 ---------------FIQ-VSCGMALTVVLSITGVVFTIGSSMHGQLGNPHADGR-TVCA 524

Query: 346 VSSLLGIQ-IEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLE 404
           V  LL  + +  +++G  H   ++++G V+ +G  + GQLG G     + P L+DA  LE
Sbjct: 525 VEGLLKTEFVRHISSGSSHVAVLTTNGKVFTWGKGKEGQLGLGDYLNRSTPTLVDA--LE 582

Query: 405 NVHSKSVSCGARHTAVI 421
               +S+SCG  +TA +
Sbjct: 583 GRQVESISCGYNYTAAV 599



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 8/111 (7%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           + S  DV+ F G+ FG +    D +++LP L+D+ ++ +V  +S++CG  H A+I   G+
Sbjct: 225 LDSLKDVF-FWGDAFGSILDYDDTSKSLPMLVDSTNMLDV--QSIACGETHAAIITKQGE 281

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVP---RNVACGWWHTLLLAV 474
           V+ WG    G  G+G+ ++  +     +E       + VA G  H   + V
Sbjct: 282 VYSWGNESSG--GIGNQVNIKVSRPKLVESVASLHVKAVAYGSKHACAVTV 330


>gi|442319627|ref|YP_007359648.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441487269|gb|AGC43964.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 1096

 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 77/230 (33%), Positives = 109/230 (47%), Gaps = 35/230 (15%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I  + AG  H+LAL   G VW WG    GQLG G+ I   S P P+P + +         
Sbjct: 99  ITAIGAGELHSLALKSDGTVWSWGANTNGQLGDGTLISR-SVPAPVPGLTN--------- 148

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                              V  IA G  HS V+   G +  +G    GQ G G+    L+
Sbjct: 149 -------------------VVAIAAGFSHSMVLKADGTVWAWGLNAAGQLGDGTPTRRLT 189

Query: 343 PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPS 402
           P  V  L G++   +AAG  H++ +++DG ++ +GGN  GQLGTG     +    L  P 
Sbjct: 190 PVQVLGLTGVK--DIAAGNVHSLALTADGRLWTWGGNVDGQLGTGDLVGRSTAAAL--PG 245

Query: 403 LENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
           +  V   ++S G  H+ ++  DG V+ WG N  GQLGLG V+    P+QV
Sbjct: 246 MTGV--VALSGGGSHSLILKMDGSVWSWGKNDAGQLGLGSVVSTPTPTQV 293



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 122/434 (28%), Positives = 186/434 (42%), Gaps = 69/434 (15%)

Query: 68  TWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKEC 127
           +WG  ++ GQ  + +G   + P P  +    SI    AG  H +A+   G V++WG    
Sbjct: 70  SWGG-NNYGQ--LGTGSTRQNPMPARVWRLFSITAIGAGELHSLALKSDGTVWSWG---- 122

Query: 128 VPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGT------DGRGS 181
                  G L  GT + + V       LT  V+  +  S S    + GT      +  G 
Sbjct: 123 ---ANTNGQLGDGTLISRSV-PAPVPGLTNVVAIAAGFSHSMVLKADGTVWAWGLNAAGQ 178

Query: 182 GEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQ 241
             +G+  RR++                   P  V    GV+   +AAG  H+LAL+  G+
Sbjct: 179 LGDGTPTRRLT-------------------PVQVLGLTGVK--DIAAGNVHSLALTADGR 217

Query: 242 VWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES---------------------SYGKDRS 280
           +W WG   +GQLG G  +   S+   +P +                       S+GK+ +
Sbjct: 218 LWTWGGNVDGQLGTGDLVGR-STAAALPGMTGVVALSGGGSHSLILKMDGSVWSWGKNDA 276

Query: 281 AALSRGSVNSEGPGFRVPG-NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDD 339
             L  GSV S     +VPG   +  +  GG+HS  +   G +  +G     Q G G+   
Sbjct: 277 GQLGLGSVVSTPTPTQVPGLTEMVAVTGGGQHSVALRVDGTVWAWGSNARAQLGDGTQTQ 336

Query: 340 ELSPNCVSSLLGIQIEGVAA-GLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            LSP  V+ L   Q++GVAA G  H++ +  +G+V+A+G N  GQ+G G      L +L+
Sbjct: 337 RLSPCQVTGL--TQVKGVAAGGGLHSVAVKGNGEVWAWGSNSEGQVGDG----TYLMKLV 390

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCV 458
              +   V    VS G  HT  +  DG  + WG N   QLG G    R +P QV +    
Sbjct: 391 PTTARVLVERADVSAGGGHTLALKPDGTAWGWGLNAQSQLGDGTTTARPLPVQV-LNLTR 449

Query: 459 PRNVACGWWHTLLL 472
              V+ G +H+L L
Sbjct: 450 VAAVSAGTYHSLAL 463



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 109/376 (28%), Positives = 160/376 (42%), Gaps = 68/376 (18%)

Query: 104 AAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRS 163
           AAG  H +A+T  G ++TWG       G V G L TG     D+  R ++     ++   
Sbjct: 203 AAGNVHSLALTADGRLWTWG-------GNVDGQLGTG-----DLVGRSTAAALPGMT--G 248

Query: 164 QVSRSSGGTSS---GTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPG 220
            V+ S GG+ S     DG             S  K  A     G    +  P  V   PG
Sbjct: 249 VVALSGGGSHSLILKMDG----------SVWSWGKNDAGQLGLGSVVSTPTPTQV---PG 295

Query: 221 V-RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           +  +  V  GG+H++AL   G VW WG     QLG G++ + +S     PC  +      
Sbjct: 296 LTEMVAVTGGGQHSVALRVDGTVWAWGSNARAQLGDGTQTQRLS-----PCQVTGL---- 346

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIAC-GGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
                                 VKG+A  GG HS  +   G +  +G    GQ G G+  
Sbjct: 347 --------------------TQVKGVAAGGGLHSVAVKGNGEVWAWGSNSEGQVGDGTYL 386

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
            +L P     L  ++   V+AG  HT+ +  DG  + +G N   QLG G   A  LP  +
Sbjct: 387 MKLVPTTARVL--VERADVSAGGGHTLALKPDGTAWGWGLNAQSQLGDGTTTARPLPVQV 444

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCV 458
               L      +VS G  H+  + +DG V+ WG N +G +G G  ++R+ P +V+    V
Sbjct: 445 ----LNLTRVAAVSAGTYHSLALKEDGTVWGWGANYWGAIGDGTALNRSQPVKVSGT-LV 499

Query: 459 PRNVACGWWHTLLLAV 474
              VA G +H+L L+V
Sbjct: 500 AMTVASGNFHSLALSV 515



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 152/499 (30%), Positives = 212/499 (42%), Gaps = 82/499 (16%)

Query: 9   KMERVVFMWGYL-PGALPQRSPILSPLVVRLP-LTVGSAWRDVCGGGCGFAMAISDSRKL 66
           KM+  V+ WG    G L   S + +P   ++P LT   A   V GGG   ++A+     +
Sbjct: 263 KMDGSVWSWGKNDAGQLGLGSVVSTPTPTQVPGLTEMVA---VTGGGQ-HSVALRVDGTV 318

Query: 67  ITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVK--AAAGWAHCVAVTEGGEVYTWGW 124
             WGS     ++ +  G   +   P  + T  + VK  AA G  H VAV   GEV+ WG 
Sbjct: 319 WAWGSN---ARAQLGDGTQTQRLSPCQV-TGLTQVKGVAAGGGLHSVAVKGNGEVWAWG- 373

Query: 125 KECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSS-GTDGRGSGE 183
                     G +  GT L K +    +  L E    R+ VS   G T +   DG   G 
Sbjct: 374 ------SNSEGQVGDGTYLMK-LVPTTARVLVE----RADVSAGGGHTLALKPDGTAWGW 422

Query: 184 EGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVW 243
             + + ++            GD   +A P  V +    R+A V+AG  H+LAL + G VW
Sbjct: 423 GLNAQSQL------------GDGTTTARPLPVQVLNLTRVAAVSAGTYHSLALKEDGTVW 470

Query: 244 GWGYGGEGQLGLGS---RIRMVSSPHPIPCIESSYGKDRSAALS-RGSV-----NSEG-- 292
           GWG    G +G G+   R + V     +  +  + G   S ALS  GSV     NS G  
Sbjct: 471 GWGANYWGAIGDGTALNRSQPVKVSGTLVAMTVASGNFHSLALSVDGSVWAWGDNSLGQL 530

Query: 293 ----------PGFRVPG-NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL 341
                       FRVP    V  +A GG HS  +   G +  + WG    C         
Sbjct: 531 GDGTVTPTRNAPFRVPNLEGVVSLAAGGEHSLALKADGTV--WVWGRQDTCAD------- 581

Query: 342 SPNCVSSLLGI--QIEG------VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAET 393
            P  V  +L +  Q++G      V AG  H++ + +DG ++A+G N  GQL  G      
Sbjct: 582 -PENVGRVLRVPEQVQGLTDAVAVRAGRCHSVVLRADGTLWAWGRNAEGQLADGTFTDRM 640

Query: 394 LPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT 453
            P  +D   L  V S SV  G+  T  +  DG  + WG N  GQLG G  + R  P+QV 
Sbjct: 641 TPARVDG--LTGVISFSV--GSEQTLALKADGTAWAWGPNAQGQLGGGLSVPRTRPTQVP 696

Query: 454 IEGCVPRNVACGWWHTLLL 472
               V R VA G  H L+L
Sbjct: 697 TLTDV-RTVAMGAVHALVL 714



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/228 (30%), Positives = 99/228 (43%), Gaps = 35/228 (15%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
           +A G  H LAL   G+V  WG   EG+LG G+                            
Sbjct: 803 IAGGATHGLALKTDGRVLSWGANAEGELGDGT---------------------------- 834

Query: 286 GSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNC 345
            +V    P    P   V  IA G RHS  +   G++  +G  + GQ G G+T   + P  
Sbjct: 835 -TVARRAPAVVGPLAGVLSIAVGARHSLALLGDGSVQAWGSNIQGQLGDGTTVSRVLPVR 893

Query: 346 VSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLEN 405
           V  L G+    +AAG   ++ +  DG V+A+GGN  GQLG       TL  L+   +   
Sbjct: 894 VQGLTGV--AAIAAGDGFSLALKHDGTVWAWGGNTLGQLG----DNTTLRSLVPVRTQAL 947

Query: 406 VHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT 453
               +V+ G  H+  +  DG ++ WG N YG+LG G    +  P QVT
Sbjct: 948 TGVTAVAAGRNHSLALKGDGTLWAWGSNTYGELGDGTQARKLAPVQVT 995



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 106/430 (24%), Positives = 171/430 (39%), Gaps = 77/430 (17%)

Query: 56  FAMAISDSRKLITWG--STDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAV 113
            ++A+S    +  WG  S   LG   VT  ++     PF +P    +V  AAG  H +A+
Sbjct: 509 HSLALSVDGSVWAWGDNSLGQLGDGTVTPTRN----APFRVPNLEGVVSLAAGGEHSLAL 564

Query: 114 TEGGEVYTWGWKECVPS----GRVFGDLSTGTGLDKDVFERQSSFLTEQVSPR-----SQ 164
              G V+ WG ++        GRV                 Q   LT+ V+ R     S 
Sbjct: 565 KADGTVWVWGRQDTCADPENVGRVL------------RVPEQVQGLTDAVAVRAGRCHSV 612

Query: 165 VSRSSGGTSS-GTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRI 223
           V R+ G   + G +  G   +G+   R++ A+    +                      +
Sbjct: 613 VLRADGTLWAWGRNAEGQLADGTFTDRMTPARVDGLTG---------------------V 651

Query: 224 ATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES---------- 273
            + + G   TLAL   G  W WG   +GQLG G  +   + P  +P +            
Sbjct: 652 ISFSVGSEQTLALKADGTAWAWGPNAQGQLGGGLSVPR-TRPTQVPTLTDVRTVAMGAVH 710

Query: 274 -----------SYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL 322
                      ++G +    +  G+++ +    R      +G+A   ++S  I   G++ 
Sbjct: 711 ALVLKDDLTLWAWGSNAEGQVGDGALDWQAAPVRSGLAASRGLAAATQYSLGIALDGSVQ 770

Query: 323 TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFG 382
           + G    GQ G G+      P  V  L   +   +A G  H + + +DG V ++G N  G
Sbjct: 771 STGANASGQLGDGTLFPRAEPVPVIGL--SECRAIAGGATHGLALKTDGRVLSWGANAEG 828

Query: 383 QLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGD 442
           +LG G   A   P ++    L  V   S++ GARH+  +  DG V  WG N  GQLG G 
Sbjct: 829 ELGDGTTVARRAPAVVG--PLAGV--LSIAVGARHSLALLGDGSVQAWGSNIQGQLGDGT 884

Query: 443 VIDRNIPSQV 452
            + R +P +V
Sbjct: 885 TVSRVLPVRV 894



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 107/230 (46%), Gaps = 34/230 (14%)

Query: 223  IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
            +A +AAG   +LAL   G VW WG    GQLG  + +R +     +P         R+ A
Sbjct: 900  VAAIAAGDGFSLALKHDGTVWAWGGNTLGQLGDNTTLRSL-----VPV--------RTQA 946

Query: 283  LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
            L+                 V  +A G  HS  +   G L  +G   YG+ G G+   +L+
Sbjct: 947  LT----------------GVTAVAAGRNHSLALKGDGTLWAWGSNTYGELGDGTQARKLA 990

Query: 343  PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPS 402
            P  V+SL G+    + AG  H++ ++S G V+ +G NQFGQ+G G    ++  +LL A  
Sbjct: 991  PVQVTSLTGV--SALDAGDHHSLAVTSGGKVWGWGRNQFGQVGKG---VKSNWQLLPAQV 1045

Query: 403  LENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
                 + +V+ G  H+  +  D  V+ WG    GQLG G    R  P QV
Sbjct: 1046 PGLTSAVAVAGGGEHSLALLSDRSVWAWGHGDMGQLGTGMSNLRLSPVQV 1095



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 7/117 (5%)

Query: 357 VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR 416
           V AG  H++ + +DG V+++GGN +GQLGTG  +   +P    A         ++  G  
Sbjct: 52  VLAGRHHSLVLKADGTVWSWGGNNYGQLGTGSTRQNPMP----ARVWRLFSITAIGAGEL 107

Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
           H+  +  DG V+ WG N  GQLG G +I R++P+ V  +   V   +A G+ H+++L
Sbjct: 108 HSLALKSDGTVWSWGANTNGQLGDGTLISRSVPAPVPGLTNVVA--IAAGFSHSMVL 162



 Score = 47.0 bits (110), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 102/253 (40%), Gaps = 36/253 (14%)

Query: 14   VFMWG-YLPGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGST 72
            V  WG  + G L   + +   L VR+    G A       G GF++A+     +  WG  
Sbjct: 869  VQAWGSNIQGQLGDGTTVSRVLPVRVQGLTGVA---AIAAGDGFSLALKHDGTVWAWGG- 924

Query: 73   DDLGQSYVTSGKHGEIPEPFPLPTEA--SIVKAAAGWAHCVAVTEGGEVYTWGWKECVPS 130
            + LGQ     G +  +    P+ T+A   +   AAG  H +A+   G ++ WG       
Sbjct: 925  NTLGQL----GDNTTLRSLVPVRTQALTGVTAVAAGRNHSLALKGDGTLWAWG------- 973

Query: 131  GRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRR 190
               +G+L  GT   K +   Q + LT  VS        S   +SG    G G        
Sbjct: 974  SNTYGELGDGTQARK-LAPVQVTSLTG-VSALDAGDHHSLAVTSGGKVWGWGR------- 1024

Query: 191  ISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIAT-VAAGGRHTLALSDIGQVWGWGYGG 249
                 Q  +       N    P  V   PG+  A  VA GG H+LAL     VW WG+G 
Sbjct: 1025 ----NQFGQVGKGVKSNWQLLPAQV---PGLTSAVAVAGGGEHSLALLSDRSVWAWGHGD 1077

Query: 250  EGQLGLG-SRIRM 261
             GQLG G S +R+
Sbjct: 1078 MGQLGTGMSNLRL 1090



 Score = 43.5 bits (101), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 74/326 (22%), Positives = 124/326 (38%), Gaps = 75/326 (23%)

Query: 24   LPQRSP-ILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTS 82
            + +R+P ++ PL   L + VG+            ++A+     +  WGS     Q  +  
Sbjct: 836  VARRAPAVVGPLAGVLSIAVGAR----------HSLALLGDGSVQAWGSNI---QGQLGD 882

Query: 83   GKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTG 142
            G       P  +     +   AAG    +A+   G V+ WG       G   G L   T 
Sbjct: 883  GTTVSRVLPVRVQGLTGVAAIAAGDGFSLALKHDGTVWAWG-------GNTLGQLGDNTT 935

Query: 143  LDKDVFERQSSF--LTEQVSPRSQ-VSRSSGGT--SSGTDGRGSGEEGSKRRRISLAKQT 197
            L   V  R  +   +T   + R+  ++    GT  + G++  G   +G++ R+++     
Sbjct: 936  LRSLVPVRTQALTGVTAVAAGRNHSLALKGDGTLWAWGSNTYGELGDGTQARKLA----- 990

Query: 198  AESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS 257
                          P  VT   GV  + + AG  H+LA++  G+VWGWG    GQ+G G 
Sbjct: 991  --------------PVQVTSLTGV--SALDAGDHHSLAVTSGGKVWGWGRNQFGQVGKGV 1034

Query: 258  RIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITD 317
            +      P  +P + S+                              +A GG HS  +  
Sbjct: 1035 KSNWQLLPAQVPGLTSAV----------------------------AVAGGGEHSLALLS 1066

Query: 318  AGALLTFGWGLYGQCGQGSTDDELSP 343
              ++  +G G  GQ G G ++  LSP
Sbjct: 1067 DRSVWAWGHGDMGQLGTGMSNLRLSP 1092


>gi|74002225|ref|XP_851549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Canis lupus
           familiaris]
          Length = 1015

 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 116/253 (45%), Gaps = 30/253 (11%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           + +  V+ G  H+LA+   G+V+ WG G EGQLG G        P  I  +         
Sbjct: 75  LHVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLIPMKIKTLNDIK----- 129

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DD 339
                                +K ++CG  HS  +++ G + ++G    GQ G G     
Sbjct: 130 ---------------------IKQVSCGHYHSLALSEGGQVFSWGSNSDGQLGLGKKFPS 168

Query: 340 ELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAE-TLPRLL 398
           + SP  V SL GI +  VAAG  H+  +S  G  + +G N  GQL    +       +  
Sbjct: 169 QASPQRVRSLDGIPLAQVAAGGAHSFALSLSGTSFGWGRNNAGQLALHKNNVSGQSYKPY 228

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGC 457
              +L+N+    +SCG  HT V+  +GKVF +G N YGQLG     +++ P  V  I+G 
Sbjct: 229 SISALKNLGVIYISCGYEHTVVLTQNGKVFTFGDNTYGQLGHSPTAEKSGPQLVEGIDGL 288

Query: 458 VPRNVACGWWHTL 470
           V + + CG +HTL
Sbjct: 289 VSQ-IDCGSYHTL 300



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 70/159 (44%), Gaps = 26/159 (16%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G+ +A VAAGG H+ ALS  G  +GWG    GQL L          H       SY    
Sbjct: 180 GIPLAQVAAGGAHSFALSLSGTSFGWGRNNAGQLAL----------HKNNVSGQSYKPYS 229

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDD 339
            +AL    V                I+CG  H+ V+T  G + TFG   YGQ G   T +
Sbjct: 230 ISALKNLGVIY--------------ISCGYEHTVVLTQNGKVFTFGDNTYGQLGHSPTAE 275

Query: 340 ELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFG 377
           +  P  V  + G+ +  +  G +HT+  + + G V +FG
Sbjct: 276 KSGPQLVEGIDGL-VSQIDCGSYHTLAYVYTTGKVVSFG 313


>gi|417407323|gb|JAA50277.1| Putative rcc1 and btb domain-containing protein 2, partial
           [Desmodus rotundus]
          Length = 511

 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 101/176 (57%), Gaps = 7/176 (3%)

Query: 303 KGIAC----GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS-LLGIQIEGV 357
           K IAC     G H  + T  G + T+G   Y Q G G+T+    P  +S+ L   Q+  V
Sbjct: 84  KKIACLSYGSGPHIVLATTEGEVFTWGHNAYNQLGNGTTNHGSVPCHISTNLSNKQVIEV 143

Query: 358 AAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARH 417
           A G +H++ ++SDG+V+A+G N  GQ+G+G    + +PR +    L+N    +++CG   
Sbjct: 144 ACGSYHSLVLTSDGEVFAWGCNNSGQVGSGSTANQPIPRRVTG-CLQNRVVVNIACGQMC 202

Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
           +  + D G+V+ WG+N  GQLGLG   + + P ++  ++G   + VACG+ HTL+L
Sbjct: 203 SMAVVDSGEVYVWGYNGNGQLGLGSSGNHSTPCRIAALQGIRVQRVACGYAHTLVL 258



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 73/238 (30%), Positives = 117/238 (49%), Gaps = 30/238 (12%)

Query: 220 GVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
           G +IA ++ G G H +  +  G+V+ WG+    QLG G+     ++   +PC  S+    
Sbjct: 83  GKKIACLSYGSGPHIVLATTEGEVFTWGHNAYNQLGNGT-----TNHGSVPCHIST---- 133

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
                             +    V  +ACG  HS V+T  G +  +G    GQ G GST 
Sbjct: 134 -----------------NLSNKQVIEVACGSYHSLVLTSDGEVFAWGCNNSGQVGSGSTA 176

Query: 339 DELSPNCVSSLLGIQIE-GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
           ++  P  V+  L  ++   +A G   ++ +   G+VY +G N  GQLG G     + P  
Sbjct: 177 NQPIPRRVTGCLQNRVVVNIACGQMCSMAVVDSGEVYVWGYNGNGQLGLGSSGNHSTPCR 236

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
           + A  L+ +  + V+CG  HT V+ DDG+V+ WG N YGQLG G+  +++ P+ V +E
Sbjct: 237 IAA--LQGIRVQRVACGYAHTLVLTDDGQVYAWGANSYGQLGTGNKSNQSYPTPVVVE 292



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 92/215 (42%), Gaps = 41/215 (19%)

Query: 65  KLITWG--STDDLGQSYVTSGKHGEIPEPFPLP-TEASIVKAAAGWAHCVAVTEGGEVYT 121
           ++ TWG  + + LG     +  HG +P       +   +++ A G  H + +T  GEV+ 
Sbjct: 105 EVFTWGHNAYNQLGNG---TTNHGSVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFA 161

Query: 122 WGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPR-------SQVSRSSGGTSS 174
           WG   C  SG+V     +G+  ++ +  R +  L  +V          S     SG    
Sbjct: 162 WG---CNNSGQV----GSGSTANQPIPRRVTGCLQNRVVVNIACGQMCSMAVVDSGEVYV 214

Query: 175 -GTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHT 233
            G +G G    GS                SG+ +    PC +    G+R+  VA G  HT
Sbjct: 215 WGYNGNGQLGLGS----------------SGNHST---PCRIAALQGIRVQRVACGYAHT 255

Query: 234 LALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
           L L+D GQV+ WG    GQLG G++    S P P+
Sbjct: 256 LVLTDDGQVYAWGANSYGQLGTGNKSNQ-SYPTPV 289



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 3/108 (2%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           ++ + +++  G N  G LG G  Q+   PR LD+ S + +   S   G  H  +   +G+
Sbjct: 47  MTVNDEIFVLGTNCCGCLGLGDIQSTIEPRRLDSLSGKKIACLSYGSGP-HIVLATTEGE 105

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPR--NVACGWWHTLLL 472
           VF WG N Y QLG G     ++P  ++      +   VACG +H+L+L
Sbjct: 106 VFTWGHNAYNQLGNGTTNHGSVPCHISTNLSNKQVIEVACGSYHSLVL 153


>gi|340505322|gb|EGR31664.1| hypothetical protein IMG5_104860 [Ichthyophthirius multifiliis]
          Length = 1126

 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 77/267 (28%), Positives = 127/267 (47%), Gaps = 36/267 (13%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
           G+E+L        LN   +   VA G  H+LAL+  G ++ WG    GQLG G++   + 
Sbjct: 54  GNEHLEDVKIPQQLNLKQKFVQVACGATHSLALTISGIIFSWGKNLRGQLGHGNQNDCLK 113

Query: 264 SPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLT 323
              P   I++                       +   Y   I CG +HSA ++    L T
Sbjct: 114 ---PKEVIQND----------------------IIAEY---IDCGDQHSAFVSKNKELYT 145

Query: 324 FGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQ 383
           +G G Y + G G T DEL P  V  L    +  V+ G+ HT+ ++ +G VYA+G   +G+
Sbjct: 146 WGNGQYYRLGHGVTTDELIPKKVVVLEDYYVTHVSCGMNHTLIVTGEGFVYAWGDGMYGK 205

Query: 384 LGTGGD-QAETLPR---LLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG 439
           LG   D + +TLP    ++     +N     V+ G+ H+  ++ +G++F WG +K G LG
Sbjct: 206 LGVSEDCKTQTLPTRVGMICKKFRKNKMYYQVAAGSMHSLALSTNGQIFTWGSSKSGNLG 265

Query: 440 LG---DVIDRNI-PSQVTIEGCVPRNV 462
           +G   D+ D    P +++I+    +N+
Sbjct: 266 IGYNKDIQDYYTQPQKISIKLNKDKNL 292



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 70/259 (27%), Positives = 117/259 (45%), Gaps = 39/259 (15%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
            I  +A G  HTL + +  Q++ +G G  G LG    +  V  P  +             
Sbjct: 22  EIIYIACGHHHTLIIDENNQLYSFGMGKTGLLG-NEHLEDVKIPQQL------------- 67

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL 341
                          +   +V+ +ACG  HS  +T +G + ++G  L GQ G G+ +D L
Sbjct: 68  --------------NLKQKFVQ-VACGATHSLALTISGIIFSWGKNLRGQLGHGNQNDCL 112

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
            P  V     I  E +  G  H+  +S + ++Y +G  Q+ +LG G    E +P+     
Sbjct: 113 KPKEVIQN-DIIAEYIDCGDQHSAFVSKNKELYTWGNGQYYRLGHGVTTDELIPK--KVV 169

Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG-DVIDRNIPSQVTI------ 454
            LE+ +   VSCG  HT ++  +G V+ WG   YG+LG+  D   + +P++V +      
Sbjct: 170 VLEDYYVTHVSCGMNHTLIVTGEGFVYAWGDGMYGKLGVSEDCKTQTLPTRVGMICKKFR 229

Query: 455 EGCVPRNVACGWWHTLLLA 473
           +  +   VA G  H+L L+
Sbjct: 230 KNKMYYQVAAGSMHSLALS 248



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 82/325 (25%), Positives = 134/325 (41%), Gaps = 57/325 (17%)

Query: 180 GSGEEGSKRRRISLA----KQTAESSSSG--DENLSAF--PCLVTLNPGVRIATVAAGGR 231
           GS ++G K  + S+     KQ A++ ++   D +L+ F  P  +       I  ++    
Sbjct: 379 GSVKKGIKLNQNSIVSKKLKQQAKTKNTNEIDTDLNDFNRPFQIQYFKNNIIRYISCSYL 438

Query: 232 HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
           H +A+S  GQ + WG     QLG+G        P  +  I  +    ++  +S       
Sbjct: 439 HAIAISQKGQAYVWGKNIYYQLGVGYSCNYNYIPQKLQGILET----KTIIMS------- 487

Query: 292 GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL--SPNCVSSL 349
                         AC  + SA++TD G + TFG    G  G    +  +   P  V+ +
Sbjct: 488 --------------ACSDKFSALLTDKGEVWTFGTSDCGVLGHQEKNYYVVPEPKMVNDI 533

Query: 350 LGIQIEGVAAGLWHTICISSDG-DVYAFGGNQFGQLGTGGDQAETLPRLLDAPSL----- 403
              Q+  +A G    + IS+    +YA+G N +GQLG    + E      D         
Sbjct: 534 P--QMIYIACGPQGMVSISAHKRQLYAWGNNIYGQLGIKIYRTEMNVNEYDEDKNGKQQN 591

Query: 404 ------ENVHSKSVSCGARHTAVIADDGKVFCWGWNKY-GQLGLGDVID-RNIPSQ-VTI 454
                 E V  KSV  G  H+  I ++GK++  G   Y GQ  + +V D + I  Q + I
Sbjct: 592 NEQIKPEEVQIKSVDMGMFHSVAIDNNGKIYSCGLRIYSGQANVFNVEDAKGIDDQFILI 651

Query: 455 EGCVPRN-----VACGWWHTLLLAV 474
                +N     V+C  +HTL L++
Sbjct: 652 RTNELQNQQFIQVSCSEYHTLALSI 676


>gi|421871589|ref|ZP_16303210.1| regulator of chromosome condensation family protein [Brevibacillus
           laterosporus GI-9]
 gi|372459473|emb|CCF12759.1| regulator of chromosome condensation family protein [Brevibacillus
           laterosporus GI-9]
          Length = 392

 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 76/262 (29%), Positives = 122/262 (46%), Gaps = 30/262 (11%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES--------- 273
           +  V  G  HT+AL   G VW WG+   G+LG         +PH +  +           
Sbjct: 85  VLMVDTGTSHTVALQKDGTVWTWGWSAYGELGNEKAKSTEKTPHHVKWLSDVKQVRAGEN 144

Query: 274 ------------SYGKDRSAALSRGSVNSEGPGFRVPG-NYVKGIACGGRHSAVITDAGA 320
                       ++GK+RS  L  G+  +     +V G   +  I  G   S  +++ G 
Sbjct: 145 FTLALKEDGTVWAFGKNRSGQLGDGTTETRVKPVQVSGLTDIVAIDAGEEFSLALSEDGT 204

Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
           +  +G    GQ G G+ +  L P  VS L    +  ++ G      ++S+GDVY +G NQ
Sbjct: 205 VWAWGNNSVGQLGNGTREKALQPVQVSEL--TDVIAISTGEKQGYAVTSNGDVYGWGYNQ 262

Query: 381 FGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL 440
            G+LG G  ++   P L+D   + +V   +V  G +HT  + +DG V+ WG N +GQLG 
Sbjct: 263 -GKLGDGTKKSSNSPVLIDG--IYDV--IAVDSGKQHTLALKEDGTVWAWGTNTHGQLGY 317

Query: 441 GDVIDRNI-PSQVTIEGCVPRN 461
           G  ++ ++ P+QV +E   P N
Sbjct: 318 GTPVNYSMTPNQVFLESTEPLN 339



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 98/389 (25%), Positives = 162/389 (41%), Gaps = 58/389 (14%)

Query: 67  ITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKE 126
           + +G+  D      +S   G+   P P+   + ++    G +H VA+ + G V+TWGW  
Sbjct: 52  VIYGTGSDANGGLGSSSVKGKTTSPVPVDDLSDVLMVDTGTSHTVALQKDGTVWTWGW-- 109

Query: 127 CVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGS 186
                  +G+L    G +K     ++    + +S   QV R+    +      G+     
Sbjct: 110 -----SAYGEL----GNEKAKSTEKTPHHVKWLSDVKQV-RAGENFTLALKEDGTVWAFG 159

Query: 187 KRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWG 246
           K R   L   T E+           P  V ++    I  + AG   +LALS+ G VW WG
Sbjct: 160 KNRSGQLGDGTTETRVK--------P--VQVSGLTDIVAIDAGEEFSLALSEDGTVWAWG 209

Query: 247 YGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIA 306
               GQLG G+R + +    P+   E +                           V  I+
Sbjct: 210 NNSVGQLGNGTREKAL---QPVQVSELTD--------------------------VIAIS 240

Query: 307 CGGRHSAVITDAGALLTFGWGL-YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTI 365
            G +    +T  G +  +GWG   G+ G G+     SP  +  +    +  V +G  HT+
Sbjct: 241 TGEKQGYAVTSNGDV--YGWGYNQGKLGDGTKKSSNSPVLIDGIY--DVIAVDSGKQHTL 296

Query: 366 CISSDGDVYAFGGNQFGQLGTGGDQAETL-PRLLDAPSLENVHS-KSVSCGARHTAVIAD 423
            +  DG V+A+G N  GQLG G     ++ P  +   S E ++   ++  G  H+  I  
Sbjct: 297 ALKEDGTVWAWGTNTHGQLGYGTPVNYSMTPNQVFLESTEPLNQIVAIDAGGFHSHAIKK 356

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
           DG V+ WG+N  G+LGLG    +  P+++
Sbjct: 357 DGTVWSWGFNSNGELGLGHSKKQMYPAKI 385



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 106/262 (40%), Gaps = 51/262 (19%)

Query: 90  EPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFE 149
           +P  +     IV   AG    +A++E G V+ WG           G L  GT        
Sbjct: 176 KPVQVSGLTDIVAIDAGEEFSLALSEDGTVWAWG-------NNSVGQLGNGT-------- 220

Query: 150 RQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGE-EGSKRRRISLAKQTAESSSSGDENL 208
           R+ +    QVS  + V   S G   G     +G+  G    +  L   T +SS+S     
Sbjct: 221 REKALQPVQVSELTDVIAISTGEKQGYAVTSNGDVYGWGYNQGKLGDGTKKSSNS----- 275

Query: 209 SAFPCLVTLNPGVR-IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHP 267
              P L+    G+  +  V +G +HTLAL + G VW WG    GQLG G+ +    +P+ 
Sbjct: 276 ---PVLI---DGIYDVIAVDSGKQHTLALKEDGTVWAWGTNTHGQLGYGTPVNYSMTPNQ 329

Query: 268 IPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWG 327
           +  +ES+                       P N +  I  GG HS  I   G + ++G+ 
Sbjct: 330 V-FLESTE----------------------PLNQIVAIDAGGFHSHAIKKDGTVWSWGFN 366

Query: 328 LYGQCGQGSTDDELSPNCVSSL 349
             G+ G G +  ++ P  + ++
Sbjct: 367 SNGELGLGHSKKQMYPAKIETI 388


>gi|295789061|ref|NP_001171424.1| X-linked retinitis pigmentosa GTPase regulator isoform 5 [Mus
           musculus]
 gi|26332729|dbj|BAC30082.1| unnamed protein product [Mus musculus]
          Length = 557

 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 95/171 (55%), Gaps = 4/171 (2%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           ++CG  H+A++T    L  FG   +GQ G GS    + P C+ +L   +++  A G  HT
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 137

Query: 365 ICISSDGDVYAFGGNQFGQLGTGG-DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
           +  +  G VYA GGN  GQLG G  D  +T  +++     + +  K +S GA  +A + +
Sbjct: 138 LVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTI--KQLSAGANTSAALTE 195

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAV 474
           DGK+F WG N  GQ+GL D  +  IP +VT+ G     ++CG++H+  + +
Sbjct: 196 DGKLFMWGDNSEGQIGLEDKSNVCIPHEVTV-GKPISWISCGYYHSAFVTM 245



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 139/298 (46%), Gaps = 45/298 (15%)

Query: 213 CLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR-----IRMVSSPHP 267
           C+  L P  ++   A G  HTL  +D G V+  G   EGQLGLG          +    P
Sbjct: 118 CIKALKPE-KVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTP 176

Query: 268 IPCIES-SYGKDRSAALSRGSV------NSEG------------PGFRVPGNYVKGIACG 308
              I+  S G + SAAL+          NSEG            P     G  +  I+CG
Sbjct: 177 ADTIKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISWISCG 236

Query: 309 GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVS--SLLGI--QIEGVAAGLWHT 364
             HSA +T  G L TFG    G+ G     +EL  N  S   +LGI  ++  VA G  HT
Sbjct: 237 YYHSAFVTMDGELYTFGEPENGKLG---LPNELLMNHRSPQRVLGIPERVIQVACGGGHT 293

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAET-LPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
           + ++ +  VYAFG  QFGQLG G    ET  P++++   +++     +SCG  HTA++ +
Sbjct: 294 VVLT-EKVVYAFGLGQFGQLGLGTFLFETSEPKIIE--RIKDQKICHISCGENHTALMTE 350

Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC------VPRNVACGWWHTLLLAVP 475
            G ++ +G  ++G+LGLG     N  +Q     C        + +ACG  H L+ A P
Sbjct: 351 LGLLYTFGDGRHGKLGLG---MENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVFATP 405



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 70/282 (24%), Positives = 124/282 (43%), Gaps = 44/282 (15%)

Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
           ++ G  HT  ++   +++ +G    GQLGLGS+  ++  P  I  ++    K + AA  R
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAII-KPTCIKALKPE--KVKLAACGR 134

Query: 286 GSV--------------NSEGP---------------GFRVPGNYVKGIACGGRHSAVIT 316
                            N+EG                 F  P + +K ++ G   SA +T
Sbjct: 135 NHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALT 194

Query: 317 DAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAF 376
           + G L  +G    GQ G     +   P+ V+  +G  I  ++ G +H+  ++ DG++Y F
Sbjct: 195 EDGKLFMWGDNSEGQIGLEDKSNVCIPHEVT--VGKPISWISCGYYHSAFVTMDGELYTF 252

Query: 377 GGNQFGQLGTGGD---QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWN 433
           G  + G+LG   +      +  R+L  P         V+CG  HT V+ +   V+ +G  
Sbjct: 253 GEPENGKLGLPNELLMNHRSPQRVLGIPE----RVIQVACGGGHTVVLTEK-VVYAFGLG 307

Query: 434 KYGQLGLGDVIDRNIPSQVT--IEGCVPRNVACGWWHTLLLA 473
           ++GQLGLG  +      ++   I+     +++CG  HT L+ 
Sbjct: 308 QFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMT 349



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 83/198 (41%), Gaps = 56/198 (28%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
           R+  VA GG HT+ L++   V+ +G G  GQLGLG+ +   S P  I             
Sbjct: 282 RVIQVACGGGHTVVLTE-KVVYAFGLGQFGQLGLGTFLFETSEPKIIE------------ 328

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD--D 339
                         R+    +  I+CG  H+A++T+ G L TFG G +G+ G G  +  +
Sbjct: 329 --------------RIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTN 374

Query: 340 ELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL-- 397
           +  P   S+ L   ++ +A G  H +  ++                         PRL  
Sbjct: 375 QFFPTLCSNFLRFAVQLIACGGCHMLVFAT-------------------------PRLGT 409

Query: 398 LDAPSLENVHSKSVSCGA 415
           +D P  E+V+   +S G+
Sbjct: 410 IDEPKFEDVYEPYISTGS 427


>gi|449481389|ref|XP_004156168.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Cucumis sativus]
          Length = 485

 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 110/369 (29%), Positives = 153/369 (41%), Gaps = 63/369 (17%)

Query: 89  PEPFPLPTEASI--VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGT----G 142
           P+ F  P E +   +  A G  H  AV   G ++TWG  +       FG L  GT     
Sbjct: 49  PDLFGCPGEINSRWLDIACGREHTAAVASDGSLFTWGAND-------FGQLGDGTEEKSK 101

Query: 143 LDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSS 202
           L K V + Q  F+         VS  +  T++  + R +    S RR             
Sbjct: 102 LPKKVNQLQGEFV-------KSVSCGAHCTAAIAEPRENDGTLSTRRLWIW--------- 145

Query: 203 SGDENLSAFPCLV--TLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR 260
            G    S FP L      P   I  V+ G  H +ALSD GQ+  WGY   GQLG G    
Sbjct: 146 -GQNQGSNFPRLFWGAFTPQTIIRQVSCGAVHVVALSDDGQLQAWGYNEYGQLGRGVTSE 204

Query: 261 MVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA 320
            +     I    +++ K             E P        +  ++CG  HSA I++ G 
Sbjct: 205 GLQGARII----NAFAK----------FLDEAPELVT----ITKVSCGEYHSAAISENGE 246

Query: 321 LLTFGWGLYGQ---CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
           + T+G G  GQ   C   S D EL P  V +L GI ++ +A G  HT  I+ +G +YA+G
Sbjct: 247 VYTWGLGSMGQLGHCSLQSADKELIPRRVVALDGICVKDIACGGVHTCAITQNGSLYAWG 306

Query: 378 GN---------QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVF 428
           G          Q G        +ET  R L    + +   + V+CG  HT V   DG++ 
Sbjct: 307 GGQVGQLGVGPQTGFFSCIAGDSETFLRNLPVVVVSD-GVQHVACGHSHTLVSTKDGRIH 365

Query: 429 CWGWNKYGQ 437
            WG+N YGQ
Sbjct: 366 GWGYNSYGQ 374



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 81/296 (27%), Positives = 128/296 (43%), Gaps = 65/296 (21%)

Query: 229 GGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSP---HP--IPC--------IESSY 275
           G    ++L     ++ WGY   GQ G   +   +  P   HP    C        ++ + 
Sbjct: 8   GMTQNVSLPRKSAIYVWGYNQSGQTGRKGKDHQLRVPRQLHPDLFGCPGEINSRWLDIAC 67

Query: 276 GKDRSAAL-SRGSVNSEGPG-------------------FRVPGNYVKGIACGGRHSAVI 315
           G++ +AA+ S GS+ + G                      ++ G +VK ++CG   +A I
Sbjct: 68  GREHTAAVASDGSLFTWGANDFGQLGDGTEEKSKLPKKVNQLQGEFVKSVSCGAHCTAAI 127

Query: 316 TDA----GALLTFGWGLYGQCGQGSTDDEL-----SPNCVSSLLGIQIEGVAAGLWHTIC 366
            +     G L T    ++GQ  QGS    L     +P  +       I  V+ G  H + 
Sbjct: 128 AEPRENDGTLSTRRLWIWGQ-NQGSNFPRLFWGAFTPQTI-------IRQVSCGAVHVVA 179

Query: 367 ISSDGDVYAFGGNQFGQLG--------TGGDQAETLPRLLD-APSLENVHSKSVSCGARH 417
           +S DG + A+G N++GQLG         G        + LD AP L  +    VSCG  H
Sbjct: 180 LSDDGQLQAWGYNEYGQLGRGVTSEGLQGARIINAFAKFLDEAPELVTI--TKVSCGEYH 237

Query: 418 TAVIADDGKVFCWGWNKYGQLG---LGDVIDRNIPSQVT-IEGCVPRNVACGWWHT 469
           +A I+++G+V+ WG    GQLG   L       IP +V  ++G   +++ACG  HT
Sbjct: 238 SAAISENGEVYTWGLGSMGQLGHCSLQSADKELIPRRVVALDGICVKDIACGGVHT 293


>gi|336116892|ref|YP_004571659.1| hypothetical protein MLP_12420 [Microlunatus phosphovorus NM-1]
 gi|334684671|dbj|BAK34256.1| hypothetical protein MLP_12420 [Microlunatus phosphovorus NM-1]
          Length = 508

 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 82/277 (29%), Positives = 134/277 (48%), Gaps = 44/277 (15%)

Query: 203 SGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMV 262
           +GD   +A    V +     +  V  GG H+LAL + G VW WG+G +GQLG G+     
Sbjct: 264 AGDTGFNAHTIPVKVEGLSGVTAVDIGGWHSLALREDGTVWSWGHGHQGQLGDGT----- 318

Query: 263 SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPG-NYVKGIACGGRHSAVITDAGAL 321
           +S H    +                         VPG + VK ++ G RHS  +   G +
Sbjct: 319 NSDHNAAAV-------------------------VPGLSGVKAVSAGYRHSLALLRDGTV 353

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAA---GLWH----TICISSDGDVY 374
            ++G+   GQ G G+  +  +P  V+SL G +++ +AA    ++H    ++ +  DG V+
Sbjct: 354 WSWGYNAQGQLGDGTNTNRNTPVKVASL-GGRVKAIAASSSNVFHDPSFSLALLEDGTVW 412

Query: 375 AFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNK 434
           ++G N + QLG G + +   P  +    L  V  K+++ G RH+  +  DG V+ WG N 
Sbjct: 413 SWGTNDWHQLGDGTNTSRNTP--VKVSDLSGV--KAIAPGGRHSLALLKDGTVWGWGAND 468

Query: 435 YGQLGLGDVIDRNIPSQVTIEGCVP-RNVACGWWHTL 470
           +GQ+G GD       + V IEG    + +A G WH++
Sbjct: 469 HGQVGTGDGTPDRYAAPVKIEGISHVKAIAAGGWHSI 505



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 109/246 (44%), Gaps = 35/246 (14%)

Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
           V ++ +  GG  +LAL + G VW WG     QLG G++             E+ +     
Sbjct: 178 VGVSAIDGGGWFSLALLNDGSVWSWGRNDWAQLGDGTK-------------ETRHAPVDV 224

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST--D 338
             L+R                VK IA GG  S  +   G + ++G   + Q G G T  +
Sbjct: 225 MHLARFG--------------VKAIAAGGWTSLALLKDGTVWSWGANDWRQLGAGDTGFN 270

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
               P  V  L G+    V  G WH++ +  DG V+++G    GQLG G +       ++
Sbjct: 271 AHTIPVKVEGLSGVT--AVDIGGWHSLALREDGTVWSWGHGHQGQLGDGTNSDHNAAAVV 328

Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCV 458
             P L  V  K+VS G RH+  +  DG V+ WG+N  GQLG G   +RN P +V   G  
Sbjct: 329 --PGLSGV--KAVSAGYRHSLALLRDGTVWSWGYNAQGQLGDGTNTNRNTPVKVASLGGR 384

Query: 459 PRNVAC 464
            + +A 
Sbjct: 385 VKAIAA 390



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 104/234 (44%), Gaps = 34/234 (14%)

Query: 241 QVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGN 300
           Q W WG    G+LG G+  R  + P P+P ++                            
Sbjct: 146 QGWVWGQNDHGELGDGTNKRRFA-PSPMPYLDQVG------------------------- 179

Query: 301 YVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAG 360
            V  I  GG  S  + + G++ ++G   + Q G G+ +   +P  V  L    ++ +AAG
Sbjct: 180 -VSAIDGGGWFSLALLNDGSVWSWGRNDWAQLGDGTKETRHAPVDVMHLARFGVKAIAAG 238

Query: 361 LWHTICISSDGDVYAFGGNQFGQLGTG--GDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
            W ++ +  DG V+++G N + QLG G  G  A T+P  +    L  V   +V  G  H+
Sbjct: 239 GWTSLALLKDGTVWSWGANDWRQLGAGDTGFNAHTIP--VKVEGLSGV--TAVDIGGWHS 294

Query: 419 AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
             + +DG V+ WG    GQLG G   D N  + V     V + V+ G+ H+L L
Sbjct: 295 LALREDGTVWSWGHGHQGQLGDGTNSDHNAAAVVPGLSGV-KAVSAGYRHSLAL 347


>gi|440898458|gb|ELR49953.1| RCC1 and BTB domain-containing protein 2, partial [Bos grunniens
           mutus]
          Length = 544

 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 63/176 (35%), Positives = 102/176 (57%), Gaps = 7/176 (3%)

Query: 303 KGIAC----GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS-LLGIQIEGV 357
           K IAC     G H  + T  G + T+G   Y Q G G+T+  L P  +S+ L   Q+  V
Sbjct: 91  KKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEV 150

Query: 358 AAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARH 417
           A G +H++ ++SDG+V+A+G N  GQ+G+G    + +PR +    L++    +++CG   
Sbjct: 151 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTG-CLQSKVVVNIACGQMC 209

Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHTLLL 472
           +  + + G+VF WG+N  GQLGLG   ++  P +V  ++G   + VACG+ HTL+L
Sbjct: 210 SMAVVNTGEVFVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 265



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 122/253 (48%), Gaps = 31/253 (12%)

Query: 220 GVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
           G +IA ++ G G H +  +  G+V+ WG+    QLG G+                     
Sbjct: 90  GKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTT-------------------- 129

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
            +A L    +++      +    V  +ACG  HS V+T  G +  +G+   GQ G GST 
Sbjct: 130 -NAGLVPYHIST-----NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTA 183

Query: 339 DELSPNCVSSLLGIQIE-GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
           ++  P  V+  L  ++   +A G   ++ + + G+V+ +G N  GQLG G    +  P  
Sbjct: 184 NQPIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGSSGNQPTP-- 241

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE-G 456
               +L+ +  + V+CG  HT V+ D+G+V+ WG N YGQLG G+  +++ P+ V +E  
Sbjct: 242 CRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVVEKD 301

Query: 457 CVPRNVACGWWHT 469
            +    AC   HT
Sbjct: 302 RIIEIAACHSAHT 314



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 114/238 (47%), Gaps = 44/238 (18%)

Query: 203 SGDENLSAFPCLVTLN-PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +G  N    P  ++ N    ++  VA G  H+L L+  G+V+ WGY   GQ+G GS    
Sbjct: 126 NGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---- 181

Query: 262 VSSPHPIP-----CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVIT 316
            ++  PIP     C++S                            V  IACG   S  + 
Sbjct: 182 -TANQPIPRRVTGCLQS--------------------------KVVVNIACGQMCSMAVV 214

Query: 317 DAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAF 376
           + G +  +G+   GQ G GS+ ++ +P  V++L GI+++ VA G  HT+ ++ +G VYA+
Sbjct: 215 NTGEVFVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAW 274

Query: 377 GGNQFGQLGTGG--DQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           G N +GQLGTG   +Q+   P +++   +  +     +C + HT A     G V+ WG
Sbjct: 275 GANSYGQLGTGNKSNQSYPTPVVVEKDRIIEI----AACHSAHTSAAKTQGGHVYMWG 328



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 79/187 (42%), Gaps = 34/187 (18%)

Query: 91  PFPLPTEAS---IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDV 147
           P+ + T  S   +++ A G  H + +T  GEV+ WG+          G + +G+  ++ +
Sbjct: 135 PYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS-------GQVGSGSTANQPI 187

Query: 148 FERQSSFLTEQVSPRSQVSRSSGGTSSGTDG------RGSGEEGSKRRRISLAKQTAESS 201
             R +  L  +V       +        T         G+G+ G                
Sbjct: 188 PRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLGL--------------G 233

Query: 202 SSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           SSG++     PC V    G+R+  VA G  HTL L+D GQV+ WG    GQLG G++   
Sbjct: 234 SSGNQ---PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQ 290

Query: 262 VSSPHPI 268
            S P P+
Sbjct: 291 -SYPTPV 296



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 15/111 (13%)

Query: 370 DGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFC 429
           + +++  G N  G LG G  Q+   PR LD+ S + +   S   G  H  +   +G+VF 
Sbjct: 57  NDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGP-HIVLATTEGEVFT 115

Query: 430 WGWNKYGQLGLGDV--------IDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           WG N Y QLG G          I  N+ ++  IE      VACG +H+L+L
Sbjct: 116 WGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIE------VACGSYHSLVL 160


>gi|348525468|ref|XP_003450244.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like
           [Oreochromis niloticus]
          Length = 536

 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 73/231 (31%), Positives = 110/231 (47%), Gaps = 30/231 (12%)

Query: 203 SGDENLSAFPCLVTLNP-GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +G  N    P LV+ N    R+  VA G  HT+AL+  G+V+ WGY   GQ+G GS    
Sbjct: 118 NGTTNHGLTPALVSTNLLSKRVTEVACGSHHTIALTTDGEVYAWGYNNSGQVGSGS---- 173

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
            ++  P P   SS  +++                      V  IACG   S  + D G +
Sbjct: 174 -TANQPTPRRVSSCLQNK---------------------VVVNIACGQLCSMAVLDNGEI 211

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             +G+   GQ G G+  ++ +P  +++L G+ I  VA G  HT+ ++ +G VYA+G N +
Sbjct: 212 YGWGYNCNGQLGLGNNGNQQTPCRIAALQGVNIVQVACGYAHTLALTDEGFVYAWGANSY 271

Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           GQLGTG    + LP  ++      V  +  +C   HT A     G+V  WG
Sbjct: 272 GQLGTGNKSNQALPTPINTDKERIV--EVAACHTSHTSAAKTQSGQVLMWG 320



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/166 (36%), Positives = 98/166 (59%), Gaps = 3/166 (1%)

Query: 309 GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS-LLGIQIEGVAAGLWHTICI 367
           G H  + T  G +  +G   Y Q G G+T+  L+P  VS+ LL  ++  VA G  HTI +
Sbjct: 93  GPHVVIATADGEVYAWGHNGYSQLGNGTTNHGLTPALVSTNLLSKRVTEVACGSHHTIAL 152

Query: 368 SSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKV 427
           ++DG+VYA+G N  GQ+G+G    +  PR + +  L+N    +++CG   +  + D+G++
Sbjct: 153 TTDGEVYAWGYNNSGQVGSGSTANQPTPRRVSS-CLQNKVVVNIACGQLCSMAVLDNGEI 211

Query: 428 FCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
           + WG+N  GQLGLG+  ++  P ++  ++G     VACG+ HTL L
Sbjct: 212 YGWGYNCNGQLGLGNNGNQQTPCRIAALQGVNIVQVACGYAHTLAL 257



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/269 (28%), Positives = 130/269 (48%), Gaps = 31/269 (11%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMV 262
           GD   +  P  + +  G +I +++ G G H +  +  G+V+ WG+ G  QLG G+    +
Sbjct: 66  GDLQSTIEPRRIDVLCGKKIVSLSYGTGPHVVIATADGEVYAWGHNGYSQLGNGTTNHGL 125

Query: 263 SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL 322
           +     P + S+                      +    V  +ACG  H+  +T  G + 
Sbjct: 126 T-----PALVST---------------------NLLSKRVTEVACGSHHTIALTTDGEVY 159

Query: 323 TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE-GVAAGLWHTICISSDGDVYAFGGNQF 381
            +G+   GQ G GST ++ +P  VSS L  ++   +A G   ++ +  +G++Y +G N  
Sbjct: 160 AWGYNNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDNGEIYGWGYNCN 219

Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
           GQLG G +  +  P  + A  L+ V+   V+CG  HT  + D+G V+ WG N YGQLG G
Sbjct: 220 GQLGLGNNGNQQTPCRIAA--LQGVNIVQVACGYAHTLALTDEGFVYAWGANSYGQLGTG 277

Query: 442 DVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
           +  ++ +P+ + T +  +    AC   HT
Sbjct: 278 NKSNQALPTPINTDKERIVEVAACHTSHT 306



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 52/108 (48%), Gaps = 3/108 (2%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           ++ + +V+A G N  G LG G  Q+   PR +D    + + S S   G  H  +   DG+
Sbjct: 46  VTVNDEVFALGTNCSGCLGLGDLQSTIEPRRIDVLCGKKIVSLSYGTGP-HVVIATADGE 104

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPR--NVACGWWHTLLL 472
           V+ WG N Y QLG G       P+ V+      R   VACG  HT+ L
Sbjct: 105 VYAWGHNGYSQLGNGTTNHGLTPALVSTNLLSKRVTEVACGSHHTIAL 152


>gi|302824131|ref|XP_002993711.1| hypothetical protein SELMODRAFT_431761 [Selaginella moellendorffii]
 gi|300138435|gb|EFJ05203.1| hypothetical protein SELMODRAFT_431761 [Selaginella moellendorffii]
          Length = 991

 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 60/171 (35%), Positives = 95/171 (55%), Gaps = 4/171 (2%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
           V  IACG RH+A++T  G +  +G    G+ G G   D   P  V +L G+  E VA G 
Sbjct: 291 VSSIACGSRHAALVTKQGDVFCWGEEYGGRLGHGIDVDVSEPQLVQALAGVNAELVACGD 350

Query: 362 WHTICISSDGDVYAFGGNQF--GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
           +HT  ++  G++Y +G +    G +G     +  +P+ + +P LE V   S++CGA HTA
Sbjct: 351 FHTCAVTLSGELYTWGADAQSGGLVGHSNPVSHWMPKRMSSP-LEGVRISSIACGAWHTA 409

Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
           +++  G++F +G   +G LG GD  +  IP +V +++G      ACG WHT
Sbjct: 410 LVSSAGQLFTFGDGTFGVLGHGDKRNLAIPKEVESLKGLKTVRAACGIWHT 460



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 121/268 (45%), Gaps = 42/268 (15%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           GVRI+++A G  HT  +S  GQ++ +G G  G LG G + R ++ P  +  ++       
Sbjct: 395 GVRISSIACGAWHTALVSSAGQLFTFGDGTFGVLGHGDK-RNLAIPKEVESLK------- 446

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITD------------AGALLTFGWG 327
                              G      ACG  H+A + +            +G L T+G G
Sbjct: 447 -------------------GLKTVRAACGIWHTAAVVEVIVGYSSATSCSSGKLFTWGDG 487

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG 387
              + G G  + +L P CV++L+      VA G   T+ +++ G V+  G   +GQLG  
Sbjct: 488 DKYRLGHGDKEQKLVPTCVAALVDYNFRQVACGHSLTVALTTSGRVFTMGSTIYGQLGNP 547

Query: 388 GDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN 447
               + +P ++D   L     + + CGA H A ++   +++ WG    G+LG GDV DR 
Sbjct: 548 KADGK-VPGMVDG-ELARTFVEEIGCGAHHVAALSSKTEIYTWGKGANGRLGHGDVEDRT 605

Query: 448 IPSQV-TIEGCVPRNVACGWWHTLLLAV 474
            P+ V  +     + VACG   T ++ +
Sbjct: 606 APTLVEALRDKQVKTVACGSSFTAVICL 633



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 77/268 (28%), Positives = 122/268 (45%), Gaps = 47/268 (17%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           ++++A G RH   ++  G V+ WG    G+LG G  +  VS P  +  +           
Sbjct: 291 VSSIACGSRHAALVTKQGDVFCWGEEYGGRLGHGIDVD-VSEPQLVQAL----------- 338

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY--GQCGQGSTDDE 340
                VN+E             +ACG  H+  +T +G L T+G      G  G  +    
Sbjct: 339 ---AGVNAE------------LVACGDFHTCAVTLSGELYTWGADAQSGGLVGHSNPVSH 383

Query: 341 LSPNCVSS-LLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLD 399
             P  +SS L G++I  +A G WHT  +SS G ++ FG   FG LG G  +   +P+ ++
Sbjct: 384 WMPKRMSSPLEGVRISSIACGAWHTALVSSAGQLFTFGDGTFGVLGHGDKRNLAIPKEVE 443

Query: 400 APSLENVHSKSVSCGARHTAVIAD------------DGKVFCWGWNKYGQLGLGDVIDRN 447
             SL+ + +   +CG  HTA + +             GK+F WG     +LG GD   + 
Sbjct: 444 --SLKGLKTVRAACGIWHTAAVVEVIVGYSSATSCSSGKLFTWGDGDKYRLGHGDKEQKL 501

Query: 448 IPSQV-TIEGCVPRNVACGWWHTLLLAV 474
           +P+ V  +     R VACG  H+L +A+
Sbjct: 502 VPTCVAALVDYNFRQVACG--HSLTVAL 527



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 79/276 (28%), Positives = 116/276 (42%), Gaps = 41/276 (14%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P LV    GV    VA G  HT A++  G+++ WG   +   GL      VS  H +P  
Sbjct: 332 PQLVQALAGVNAELVACGDFHTCAVTLSGELYTWGADAQSG-GLVGHSNPVS--HWMP-- 386

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
                K  S+ L               G  +  IACG  H+A+++ AG L TFG G +G 
Sbjct: 387 -----KRMSSPLE--------------GVRISSIACGAWHTALVSSAGQLFTFGDGTFGV 427

Query: 332 CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI------------SSDGDVYAFGGN 379
            G G   +   P  V SL G++    A G+WHT  +             S G ++ +G  
Sbjct: 428 LGHGDKRNLAIPKEVESLKGLKTVRAACGIWHTAAVVEVIVGYSSATSCSSGKLFTWGDG 487

Query: 380 QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG 439
              +LG G  + + +P  + A  L + + + V+CG   T  +   G+VF  G   YGQLG
Sbjct: 488 DKYRLGHGDKEQKLVPTCVAA--LVDYNFRQVACGHSLTVALTTSGRVFTMGSTIYGQLG 545

Query: 440 LGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLA 473
                D  +P  V   +       + CG  H   L+
Sbjct: 546 -NPKADGKVPGMVDGELARTFVEEIGCGAHHVAALS 580



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 78/145 (53%), Gaps = 6/145 (4%)

Query: 333 GQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAE 392
           G GS  D L P  + + + + +  +A G  H   ++  GDV+ +G    G+LG G D   
Sbjct: 270 GAGSRVDSLVPKALQAAVVLDVSSIACGSRHAALVTKQGDVFCWGEEYGGRLGHGIDVDV 329

Query: 393 TLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKY--GQLGLGDVIDRNIPS 450
           + P+L+ A  L  V+++ V+CG  HT  +   G+++ WG +    G +G  + +   +P 
Sbjct: 330 SEPQLVQA--LAGVNAELVACGDFHTCAVTLSGELYTWGADAQSGGLVGHSNPVSHWMPK 387

Query: 451 QVT--IEGCVPRNVACGWWHTLLLA 473
           +++  +EG    ++ACG WHT L++
Sbjct: 388 RMSSPLEGVRISSIACGAWHTALVS 412


>gi|118396198|ref|XP_001030441.1| Regulator of chromosome condensation (RCC1) [Tetrahymena thermophila]
 gi|89284744|gb|EAR82778.1| Regulator of chromosome condensation (RCC1) [Tetrahymena thermophila
            SB210]
          Length = 1984

 Score =  102 bits (253), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 65/238 (27%), Positives = 112/238 (47%), Gaps = 36/238 (15%)

Query: 211  FPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI-RMVSSPHPIP 269
            FP L+       + +VA G +H++A++  G V  WG     QLGLG +    V  P PIP
Sbjct: 1532 FPKLIVPLKDTIVTSVACGYQHSVAITYAGTVLAWGDNSHSQLGLGEKSPSSVPFPTPIP 1591

Query: 270  CIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
             + +                            ++ ++CG  H+  +   G + ++G G  
Sbjct: 1592 ALTN----------------------------IQSVSCGSEHTLALDYIGQVFSWGNGEG 1623

Query: 330  GQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLG---- 385
            G  G G+ D   SP  + +L G+ ++ +  G  H++ ++ +  VY++G N+ GQLG    
Sbjct: 1624 GLLGHGNEDVCPSPKIIEALKGLNVDFIVCGGLHSLVLTKNRQVYSWGRNEGGQLGIDKK 1683

Query: 386  --TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
              T      T P+ +   +LE V    ++ G  H+  +A +G+V+ WG+N  GQ+GLG
Sbjct: 1684 LFTNEKCYLTTPKRVKG-NLEGVGVIQIAAGEAHSLALALNGQVYGWGYNMNGQIGLG 1740



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 71/250 (28%), Positives = 115/250 (46%), Gaps = 40/250 (16%)

Query: 239  IGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVP 298
            +G ++ WG   EGQ+G                  + Y   ++    +  VN   P   VP
Sbjct: 1499 VGVMFSWGQNTEGQMG------------------NVYDPKQNLLSKKIKVNF--PKLIVP 1538

Query: 299  --GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGI---- 352
                 V  +ACG +HS  IT AG +L +G   + Q G G    E SP+ V     I    
Sbjct: 1539 LKDTIVTSVACGYQHSVAITYAGTVLAWGDNSHSQLGLG----EKSPSSVPFPTPIPALT 1594

Query: 353  QIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVS 412
             I+ V+ G  HT+ +   G V+++G  + G LG G +     P++++A  L+ ++   + 
Sbjct: 1595 NIQSVSCGSEHTLALDYIGQVFSWGNGEGGLLGHGNEDVCPSPKIIEA--LKGLNVDFIV 1652

Query: 413  CGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN------IPSQV--TIEGCVPRNVAC 464
            CG  H+ V+  + +V+ WG N+ GQLG+   +  N       P +V   +EG     +A 
Sbjct: 1653 CGGLHSLVLTKNRQVYSWGRNEGGQLGIDKKLFTNEKCYLTTPKRVKGNLEGVGVIQIAA 1712

Query: 465  GWWHTLLLAV 474
            G  H+L LA+
Sbjct: 1713 GEAHSLALAL 1722



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 84/313 (26%), Positives = 128/313 (40%), Gaps = 90/313 (28%)

Query: 204  GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
            G+++ S+ P    +     I +V+ G  HTLAL  IGQV+ WG G  G LG G+   +  
Sbjct: 1577 GEKSPSSVPFPTPIPALTNIQSVSCGSEHTLALDYIGQVFSWGNGEGGLLGHGNE-DVCP 1635

Query: 264  SPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLT 323
            SP  I  ++                          G  V  I CGG HS V+T    + +
Sbjct: 1636 SPKIIEALK--------------------------GLNVDFIVCGGLHSLVLTKNRQVYS 1669

Query: 324  FGWGLYGQCGQGSTDDELSPN--CV--------SSLLGIQIEGVAAGLWHTICISSDGDV 373
            +G    GQ G    D +L  N  C          +L G+ +  +AAG  H++ ++ +G V
Sbjct: 1670 WGRNEGGQLG---IDKKLFTNEKCYLTTPKRVKGNLEGVGVIQIAAGEAHSLALALNGQV 1726

Query: 374  YAFGGNQFGQLGTGGDQAETL----PRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFC 429
            Y +G N  GQ+G G  Q +T     P+L+  P L  +                   K+FC
Sbjct: 1727 YGWGYNMNGQIGLGM-QTDTYPVYEPQLI--PKLNKIE------------------KIFC 1765

Query: 430  WGWNKYGQLGL-----------GDVIDRNIPS---QVTIEGCVPR-----------NVAC 464
             G N   QLGL            +++D+  P    +   +  +P+           +V+C
Sbjct: 1766 CGLNDSNQLGLEKEPIKITSTTNNILDQYKPQDQKRAVTDVFIPKKMDCFHQIPVLHVSC 1825

Query: 465  GWWHTLLLAVPPT 477
            G  H+L L V  T
Sbjct: 1826 GHNHSLALVVADT 1838



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 72/301 (23%), Positives = 120/301 (39%), Gaps = 69/301 (22%)

Query: 204  GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
            G+E++   P ++    G+ +  +  GG H+L L+   QV+ WG    GQLG+  ++    
Sbjct: 1629 GNEDVCPSPKIIEALKGLNVDFIVCGGLHSLVLTKNRQVYSWGRNEGGQLGIDKKL---- 1684

Query: 264  SPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLT 323
                      +  K       R   N EG G       V  IA G  HS  +   G +  
Sbjct: 1685 ---------FTNEKCYLTTPKRVKGNLEGVG-------VIQIAAGEAHSLALALNGQVYG 1728

Query: 324  FGWGLYGQCGQGSTDDE---LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
            +G+ + GQ G G   D      P  +  L  I+                   ++  G N 
Sbjct: 1729 WGYNMNGQIGLGMQTDTYPVYEPQLIPKLNKIE------------------KIFCCGLND 1770

Query: 381  FGQLG-------------------TGGDQAETLPRLLDAPSLENVHS---KSVSCGARHT 418
              QLG                      DQ   +  +     ++  H      VSCG  H+
Sbjct: 1771 SNQLGLEKEPIKITSTTNNILDQYKPQDQKRAVTDVFIPKKMDCFHQIPVLHVSCGHNHS 1830

Query: 419  -AVIADDGK---VFCWGWNKYGQLGLGDV-IDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
             A++  D K   +F WG +K+GQLG+G+   + ++P  +T ++     ++ACG +H+L++
Sbjct: 1831 LALVVADTKHYMLFAWGMHKHGQLGIGETGQNSSVPRPITYLQDVTTYSMACGSYHSLVV 1890

Query: 473  A 473
            A
Sbjct: 1891 A 1891


>gi|18411298|ref|NP_565144.1| regulator of chromosome condensation and FYVE zinc finger
           domain-containing protein [Arabidopsis thaliana]
 gi|15811367|gb|AAL08940.1| zinc finger protein [Arabidopsis thaliana]
 gi|332197787|gb|AEE35908.1| regulator of chromosome condensation and FYVE zinc finger
           domain-containing protein [Arabidopsis thaliana]
          Length = 1103

 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 107/414 (25%), Positives = 176/414 (42%), Gaps = 67/414 (16%)

Query: 74  DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRV 133
           D   SY+T+     +P+P        + + A G  H   VT  GE++TWG +     GR+
Sbjct: 257 DKNASYLTTRTDVLVPKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEES---GGRL 313

Query: 134 FGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEE---GSKRRR 190
                 G G+ KDVF  +   L E ++  S V   + G         +GE    G     
Sbjct: 314 ------GHGIGKDVFHPR---LVESLTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHN 364

Query: 191 ISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGE 250
           + L    ++ S    + ++      +L  G+ +A+V+ G  HT  ++  G+++ +G G  
Sbjct: 365 VGLLGHGSDISHWIPKRIAG-----SLE-GLHVASVSCGPWHTALITSYGRLFTFGDGTF 418

Query: 251 GQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGR 310
           G LG G +   V  P  +  +                      G R        ++CG  
Sbjct: 419 GVLGHGDK-ETVQYPREVESLS---------------------GLRTIA-----VSCGVW 451

Query: 311 HSAVITD------------AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
           H+A + +            +G L T+G G   + G G  D  L P CV +L+      +A
Sbjct: 452 HTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIA 511

Query: 359 AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
            G   T+ +++ G V+  G   +GQLG      + LP L++   L +   + +SCGA H 
Sbjct: 512 CGHSLTVGLTTSGQVFTMGSTVYGQLGNLQTDGK-LPCLVE-DKLASEFVEEISCGAYHV 569

Query: 419 AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNV---ACGWWHT 469
           A +    +V+ WG    G+LG GD+ DR +P+   +E    R+V   ACG  +T
Sbjct: 570 AALTSRNEVYTWGKGANGRLGHGDLEDRKVPT--IVEALKDRHVKYIACGSNYT 621



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 82/283 (28%), Positives = 122/283 (43%), Gaps = 56/283 (19%)

Query: 212 PCLV-TLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGE--GQLGLGSRIRMVSSPHPI 268
           P LV +L     +  VA G  HT A++  G+++ WG G    G LG GS I      H I
Sbjct: 324 PRLVESLTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDI-----SHWI 378

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL 328
           P         R A    GS+          G +V  ++CG  H+A+IT  G L TFG G 
Sbjct: 379 P--------KRIA----GSLE---------GLHVASVSCGPWHTALITSYGRLFTFGDGT 417

Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI------------SSDGDVYAF 376
           +G  G G  +    P  V SL G++   V+ G+WHT  +             S G ++ +
Sbjct: 418 FGVLGHGDKETVQYPREVESLSGLRTIAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTW 477

Query: 377 GGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYG 436
           G     +LG G       P  +  P+L + +   ++CG   T  +   G+VF  G   YG
Sbjct: 478 GDGDKNRLGHGDKDPRLKPTCV--PALIDYNFHKIACGHSLTVGLTTSGQVFTMGSTVYG 535

Query: 437 QLG-------LGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           QLG       L  +++  + S+   E      ++CG +H   L
Sbjct: 536 QLGNLQTDGKLPCLVEDKLASEFVEE------ISCGAYHVAAL 572



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 72/139 (51%), Gaps = 7/139 (5%)

Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
           D L P  + S + + +  +A G+ H   ++  G+++ +G    G+LG G  +    PRL+
Sbjct: 268 DVLVPKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRLV 327

Query: 399 DAPSLENVHSKS-VSCGARHTAVIADDGKVFCW--GWNKYGQLGLGDVIDRNIPSQV--T 453
           +  SL    S   V+CG  HT  +   G+++ W  G +  G LG G  I   IP ++  +
Sbjct: 328 E--SLTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGS 385

Query: 454 IEGCVPRNVACGWWHTLLL 472
           +EG    +V+CG WHT L+
Sbjct: 386 LEGLHVASVSCGPWHTALI 404



 Score = 47.4 bits (111), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 62/156 (39%), Gaps = 31/156 (19%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P L+  N       +A G   T+ L+  GQV+  G    GQLG       + +   +PC+
Sbjct: 500 PALIDYN----FHKIACGHSLTVGLTTSGQVFTMGSTVYGQLG------NLQTDGKLPCL 549

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
                                   ++   +V+ I+CG  H A +T    + T+G G  G+
Sbjct: 550 VED---------------------KLASEFVEEISCGAYHVAALTSRNEVYTWGKGANGR 588

Query: 332 CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI 367
            G G  +D   P  V +L    ++ +A G  +T  I
Sbjct: 589 LGHGDLEDRKVPTIVEALKDRHVKYIACGSNYTAAI 624


>gi|74144437|dbj|BAE36068.1| unnamed protein product [Mus musculus]
          Length = 527

 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 60/166 (36%), Positives = 98/166 (59%), Gaps = 3/166 (1%)

Query: 309 GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS-LLGIQIEGVAAGLWHTICI 367
           G H  + T  G + T+G   Y Q G G+T+  L P  +S+ L   Q+  VA G +H++ +
Sbjct: 84  GPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVL 143

Query: 368 SSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKV 427
           +SDG+V+A+G N  GQ+G+G    + +PR +    L+N    +++CG   +  + D G+V
Sbjct: 144 TSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTG-CLQNKVVMNIACGQMCSMAVVDTGEV 202

Query: 428 FCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
           + WG+N  GQLGLG   ++  P +V  ++G   + VACG+ HTL+L
Sbjct: 203 YVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 248



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 118/238 (49%), Gaps = 30/238 (12%)

Query: 220 GVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
           G +IA+++ G G H +  +  G+V+ WG+    QLG G+     ++   +PC  S+    
Sbjct: 73  GKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGT-----TNHGLVPCHIST---- 123

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
                             +    V  +ACG  HS V+T  G +  +G+   GQ G GST 
Sbjct: 124 -----------------NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTA 166

Query: 339 DELSPNCVSSLLGIQI-EGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
           ++  P  V+  L  ++   +A G   ++ +   G+VY +G N  GQLG G    +  P  
Sbjct: 167 NQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTP-- 224

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
               +L+ +  + V+CG  HT V+ D+G+++ WG N YGQLG G+  +++ P+ V +E
Sbjct: 225 CRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVE 282



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 114/233 (48%), Gaps = 34/233 (14%)

Query: 203 SGDENLSAFPCLVTLN-PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +G  N    PC ++ N    ++  VA G  H+L L+  G+V+ WGY   GQ+G GS    
Sbjct: 109 NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---- 164

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
            ++  PIP         R     +  V             V  IACG   S  + D G +
Sbjct: 165 -TANQPIP--------RRVTGCLQNKV-------------VMNIACGQMCSMAVVDTGEV 202

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             +G+   GQ G GS+ ++ +P  V++L GI+++ VA G  HT+ ++ +G +YA+G N +
Sbjct: 203 YVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSY 262

Query: 382 GQLGTGG--DQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           GQLGTG   +Q+   P +++   +  +     +C + HT A     G V+ WG
Sbjct: 263 GQLGTGNKSNQSYPTPVVVEKDRIIEI----AACHSAHTSAAKTQGGHVYMWG 311



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 55/111 (49%), Gaps = 15/111 (13%)

Query: 370 DGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFC 429
           + +++  G N  G LG G  Q+   PR LD+ + + + S S   G  H  +   DG+VF 
Sbjct: 40  NDEIFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGP-HIVLATTDGEVFT 98

Query: 430 WGWNKYGQLGLGDV--------IDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           WG N Y QLG G          I  N+ ++  IE      VACG +H+L+L
Sbjct: 99  WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIE------VACGSYHSLVL 143



 Score = 38.5 bits (88), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 55/133 (41%), Gaps = 17/133 (12%)

Query: 14  VFMWGYL-PGALPQRSPILSPLVVRLP--LTVGSAWRDVCGGGCGFAMAISDSRKLITWG 70
           VF WGY   G +   S    P+  R+   L         CG  C  +MA+ D+ ++  WG
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMC--SMAVVDTGEVYVWG 206

Query: 71  STDDLGQSYVTSGKHGEIPEPFPLPTEASI--VKAAAGWAHCVAVTEGGEVYTWGWKECV 128
                G   +  G  G  P P  +     I   + A G+AH + +T+ G++Y WG     
Sbjct: 207 YN---GNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWG----- 258

Query: 129 PSGRVFGDLSTGT 141
                +G L TG 
Sbjct: 259 --ANSYGQLGTGN 269


>gi|301111610|ref|XP_002904884.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262095214|gb|EEY53266.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 527

 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 111/405 (27%), Positives = 169/405 (41%), Gaps = 44/405 (10%)

Query: 65  KLITWGSTDDLGQSYVTSGKHGEIPEPFPLPT----EASIVKAAAGWAHCVAVTEGGEVY 120
           +++T+GS D  GQ      K  ++   FPL      +  IV+ A G  H  A+T  GEV+
Sbjct: 108 QMLTFGSGD-CGQLGHGVEKDKDLMVEFPLVVRPLVKLEIVRVACGGLHSAAITSAGEVF 166

Query: 121 TWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRG 180
           TWG  +    GRV          D+++  + + F  +Q +   QV      T+  T    
Sbjct: 167 TWGCDDDGALGRVG---------DENIPTKVTGFGPQQATA-VQVVGGDCHTAVVTLAGK 216

Query: 181 SGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIG 240
               G  R +       A S+    +     P L+       IA V  G    LA ++ G
Sbjct: 217 VYTWGCYRDKEGKQWCDAPSAKDAFKKKQTEPFLIKALD--NIADVRCGSSFNLARTNDG 274

Query: 241 QVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVP 298
           +V+ WG G  GQLG  +  +++     + +  + + + + +   L              P
Sbjct: 275 RVYSWGLGEMGQLGRTVDDQMKDFKGDYKVDMVYNDHLQPKPVTLGND-----------P 323

Query: 299 GNYVKGIACGGRHSAV-ITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGV 357
              VK I CG  HS   ++  G L T G   YGQ G G+T++      V  L    +  V
Sbjct: 324 LPVVKAIGCGSYHSLFALSSNGYLYTCGLNNYGQLGIGNTENCTELQLVEDLSSKNVAYV 383

Query: 358 AAGLWHTICISSDGDVYAFGGNQFGQLG-----TGGD-----QAETLPRLLDAPSLENVH 407
             G  H++ ++ DGDVY FG    GQLG     + GD     Q  T+P+  D  S +   
Sbjct: 384 DGGSHHSVVLTIDGDVYTFGRADSGQLGMLETCSTGDFKDRPQKVTIPKPKDGGSRQVC- 442

Query: 408 SKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
              +S G+ HT  + +   +F WG+     LG G   D N P QV
Sbjct: 443 --MISSGSNHTLALTESNAIFSWGYGDMLALGNGVDRDENKPYQV 485



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 114/429 (26%), Positives = 176/429 (41%), Gaps = 80/429 (18%)

Query: 33  PLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPF 92
           PLVVR PL      R  CGG    + AI+ + ++ TWG  DD        G+ G+   P 
Sbjct: 135 PLVVR-PLVKLEIVRVACGGL--HSAAITSAGEVFTWGCDDD-----GALGRVGDENIPT 186

Query: 93  PL----PTEASIVKAAAGWAHCVAVTEGGEVYTWG-WKECVPSGRVFGDLSTGTGLDKDV 147
            +    P +A+ V+   G  H   VT  G+VYTWG +++    G+ + D  +     KD 
Sbjct: 187 KVTGFGPQQATAVQVVGGDCHTAVVTLAGKVYTWGCYRD--KEGKQWCDAPSA----KDA 240

Query: 148 FERQSS--FLTEQVSPRSQVS-RSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAES 200
           F+++ +  FL + +   + V   SS   +   DGR    G GE G   R +    +  + 
Sbjct: 241 FKKKQTEPFLIKALDNIADVRCGSSFNLARTNDGRVYSWGLGEMGQLGRTVDDQMKDFKG 300

Query: 201 SSSGD----ENLSAFPCLVTLNPGVRIATVAAGGRHTL-ALSDIGQVWGWGYGGEGQLGL 255
               D    ++L   P  +  +P   +  +  G  H+L ALS  G ++  G    GQLG+
Sbjct: 301 DYKVDMVYNDHLQPKPVTLGNDPLPVVKAIGCGSYHSLFALSSNGYLYTCGLNNYGQLGI 360

Query: 256 GSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVI 315
           G+            C E    +D    LS  +V            YV G   G  HS V+
Sbjct: 361 GNTEN---------CTELQLVED----LSSKNV-----------AYVDG---GSHHSVVL 393

Query: 316 TDAGALLTFGWGLYGQCGQGST----DDELSPNCVSSLL-----GIQIEGVAAGLWHTIC 366
           T  G + TFG    GQ G   T    D +  P  V+          Q+  +++G  HT+ 
Sbjct: 394 TIDGDVYTFGRADSGQLGMLETCSTGDFKDRPQKVTIPKPKDGGSRQVCMISSGSNHTLA 453

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS-------------VSC 413
           ++    ++++G      LG G D+ E  P  +D     N   K              V  
Sbjct: 454 LTESNAIFSWGYGDMLALGNGVDRDENKPYQVDWSKATNGKDKKGKKMVFGKAEFLQVEA 513

Query: 414 GARHTAVIA 422
           G +H+AV+A
Sbjct: 514 GGQHSAVLA 522



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 78/306 (25%), Positives = 124/306 (40%), Gaps = 65/306 (21%)

Query: 208 LSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG-LGSR-------- 258
           +  FP +V     + I  VA GG H+ A++  G+V+ WG   +G LG +G          
Sbjct: 131 MVEFPLVVRPLVKLEIVRVACGGLHSAAITSAGEVFTWGCDDDGALGRVGDENIPTKVTG 190

Query: 259 --------------------IRMVSSPHPIPCIESSYGK---DRSAALSRGSVNSEGPGF 295
                               + +    +   C     GK   D  +A          P  
Sbjct: 191 FGPQQATAVQVVGGDCHTAVVTLAGKVYTWGCYRDKEGKQWCDAPSAKDAFKKKQTEPFL 250

Query: 296 RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD----------------D 339
               + +  + CG   +   T+ G + ++G G  GQ G+   D                D
Sbjct: 251 IKALDNIADVRCGSSFNLARTNDGRVYSWGLGEMGQLGRTVDDQMKDFKGDYKVDMVYND 310

Query: 340 ELSPNCVSSLLGIQ----IEGVAAGLWHTI-CISSDGDVYAFGGNQFGQLGTGGDQAETL 394
            L P  V+  LG      ++ +  G +H++  +SS+G +Y  G N +GQLG G  +  T 
Sbjct: 311 HLQPKPVT--LGNDPLPVVKAIGCGSYHSLFALSSNGYLYTCGLNNYGQLGIGNTENCTE 368

Query: 395 PRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL------GDVIDRNI 448
            +L++  S +NV    V  G+ H+ V+  DG V+ +G    GQLG+      GD  DR  
Sbjct: 369 LQLVEDLSSKNV--AYVDGGSHHSVVLTIDGDVYTFGRADSGQLGMLETCSTGDFKDR-- 424

Query: 449 PSQVTI 454
           P +VTI
Sbjct: 425 PQKVTI 430



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/118 (36%), Positives = 60/118 (50%), Gaps = 6/118 (5%)

Query: 318 AGALLTFGWGLYGQCGQGSTDDE----LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDV 373
           AG +LTFG G  GQ G G   D+      P  V  L+ ++I  VA G  H+  I+S G+V
Sbjct: 106 AGQMLTFGSGDCGQLGHGVEKDKDLMVEFPLVVRPLVKLEIVRVACGGLHSAAITSAGEV 165

Query: 374 YAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWG 431
           + +G +  G LG  GD  E +P  +     +   +  V  G  HTAV+   GKV+ WG
Sbjct: 166 FTWGCDDDGALGRVGD--ENIPTKVTGFGPQQATAVQVVGGDCHTAVVTLAGKVYTWG 221


>gi|427797227|gb|JAA64065.1| Putative alpha-tubulin suppressor, partial [Rhipicephalus
           pulchellus]
          Length = 606

 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 125/260 (48%), Gaps = 29/260 (11%)

Query: 216 TLNPGVRIATV-AAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESS 274
           T    +R+A V  + G   L ++    V+  G    G LGLG                 S
Sbjct: 92  TFVSKLRLACVFGSSGNEALMVTQDDDVFALGSNSSGCLGLGD-------------THGS 138

Query: 275 YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
               +  AL R  +++   G              G H   +T++G LL++G   Y Q G 
Sbjct: 139 LEPRKVDALCRKGIHALAYG-------------SGPHVLAVTESGELLSWGHNGYCQLGN 185

Query: 335 GSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL 394
                 L P+ +S+ L  ++  VA G  H++ ++++GDVYA+G N  GQ+G+G    +  
Sbjct: 186 NCNTQGLVPSSISAGLSHRVAQVACGSHHSLALTTNGDVYAWGQNNCGQVGSGSTTNQPT 245

Query: 395 PRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT- 453
           PR + +  +       V+CG   +  + ++G+VF WG+N  GQLGLG+ +++  P +VT 
Sbjct: 246 PRKVSS-GIGGRRCIGVACGQTSSMAVMENGEVFGWGYNGNGQLGLGNNVNQTSPCRVTN 304

Query: 454 IEGCVPRNVACGWWHTLLLA 473
           ++G V   V CG+ HT+ L+
Sbjct: 305 LQGVVIHKVVCGYAHTMALS 324



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 71/224 (31%), Positives = 110/224 (49%), Gaps = 30/224 (13%)

Query: 230 GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVN 289
           G H LA+++ G++  WG+ G  QLG     + +  P  I           SA LS     
Sbjct: 160 GPHVLAVTESGELLSWGHNGYCQLGNNCNTQGLV-PSSI-----------SAGLS----- 202

Query: 290 SEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSL 349
                     + V  +ACG  HS  +T  G +  +G    GQ G GST ++ +P  VSS 
Sbjct: 203 ----------HRVAQVACGSHHSLALTTNGDVYAWGQNNCGQVGSGSTTNQPTPRKVSSG 252

Query: 350 LG-IQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHS 408
           +G  +  GVA G   ++ +  +G+V+ +G N  GQLG G +  +T P      +L+ V  
Sbjct: 253 IGGRRCIGVACGQTSSMAVMENGEVFGWGYNGNGQLGLGNNVNQTSP--CRVTNLQGVVI 310

Query: 409 KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
             V CG  HT  ++D+G ++ WG N YGQLG G+  ++  P ++
Sbjct: 311 HKVVCGYAHTMALSDEGVLYTWGANSYGQLGTGNKANQVSPFKM 354



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 98/214 (45%), Gaps = 35/214 (16%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
           R+A VA G  H+LAL+  G V+ WG    GQ+G GS     ++  P P            
Sbjct: 204 RVAQVACGSHHSLALTTNGDVYAWGQNNCGQVGSGS-----TTNQPTP-----------R 247

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL 341
            +S G          + G    G+ACG   S  + + G +  +G+   GQ G G+  ++ 
Sbjct: 248 KVSSG----------IGGRRCIGVACGQTSSMAVMENGEVFGWGYNGNGQLGLGNNVNQT 297

Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
           SP  V++L G+ I  V  G  HT+ +S +G +Y +G N +GQLGTG    +  P  +   
Sbjct: 298 SPCRVTNLQGVVIHKVVCGYAHTMALSDEGVLYTWGANSYGQLGTGNKANQVSPFKMPTD 357

Query: 402 SLENVHSKSVSCGARH----TAVIADDGKVFCWG 431
                  + V   A H    +AV+    +V+ WG
Sbjct: 358 I-----GRIVEIAASHYNHISAVMTQTSRVYMWG 386



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 28/159 (17%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G R   VA G   ++A+ + G+V+GWGY G GQLGLG+ +   S     PC  ++     
Sbjct: 255 GRRCIGVACGQTSSMAVMENGEVFGWGYNGNGQLGLGNNVNQTS-----PCRVTN----- 304

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDD 339
                            + G  +  + CG  H+  ++D G L T+G   YGQ G G+  +
Sbjct: 305 -----------------LQGVVIHKVVCGYAHTMALSDEGVLYTWGANSYGQLGTGNKAN 347

Query: 340 ELSPNCVSSLLGIQIEGVAAGLWH-TICISSDGDVYAFG 377
           ++SP  + + +G  +E  A+   H +  ++    VY +G
Sbjct: 348 QVSPFKMPTDIGRIVEIAASHYNHISAVMTQTSRVYMWG 386



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 106/242 (43%), Gaps = 37/242 (15%)

Query: 58  MAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTE 115
           +A+++S +L++WG      LG +  T G    +P          + + A G  H +A+T 
Sbjct: 164 LAVTESGELLSWGHNGYCQLGNNCNTQGL---VPSSISAGLSHRVAQVACGSHHSLALTT 220

Query: 116 GGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSG 175
            G+VY WG   C       G + +G+  ++    + SS     +  R  +  + G TSS 
Sbjct: 221 NGDVYAWGQNNC-------GQVGSGSTTNQPTPRKVSS----GIGGRRCIGVACGQTSSM 269

Query: 176 T---DGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRH 232
               +G   G   +   ++ L     ++S          PC VT   GV I  V  G  H
Sbjct: 270 AVMENGEVFGWGYNGNGQLGLGNNVNQTS----------PCRVTNLQGVVIHKVVCGYAH 319

Query: 233 TLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPC-------IESSYGKDRSAALSR 285
           T+ALSD G ++ WG    GQLG G++   V SP  +P        I +S+    SA +++
Sbjct: 320 TMALSDEGVLYTWGANSYGQLGTGNKANQV-SPFKMPTDIGRIVEIAASHYNHISAVMTQ 378

Query: 286 GS 287
            S
Sbjct: 379 TS 380



 Score = 39.7 bits (91), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 56/122 (45%), Gaps = 24/122 (19%)

Query: 14  VFMWGY-------LPGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFA--MAISDSR 64
           VF WGY       L   + Q SP       R+    G     V    CG+A  MA+SD  
Sbjct: 277 VFGWGYNGNGQLGLGNNVNQTSP------CRVTNLQGVVIHKVV---CGYAHTMALSDEG 327

Query: 65  KLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEA-SIVK-AAAGWAHCVAV-TEGGEVYT 121
            L TWG+ +  GQ  + +G       PF +PT+   IV+ AA+ + H  AV T+   VY 
Sbjct: 328 VLYTWGA-NSYGQ--LGTGNKANQVSPFKMPTDIGRIVEIAASHYNHISAVMTQTSRVYM 384

Query: 122 WG 123
           WG
Sbjct: 385 WG 386


>gi|340721975|ref|XP_003399388.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like isoform 1
           [Bombus terrestris]
          Length = 534

 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 121/255 (47%), Gaps = 31/255 (12%)

Query: 203 SGDENLSAFPCLVTLNPGVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +GD   + +P  V    G  I T A G G H LAL++ G+V+ WG+   G+LG  S   M
Sbjct: 58  TGDACNTFYPKKVEALCGKNIKTFAYGKGPHVLALTEEGKVYSWGHNSHGELGNCSTNHM 117

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
           +    P+P  ++              +N E         ++  IACG  HS  +T+ G +
Sbjct: 118 I----PMPVTKN--------------LNDE---------FIVDIACGSHHSLALTNEGKV 150

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCV-SSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
             +G    GQ G+    +E +P  V S+L G  +  ++ G   ++ ++  G VY +G N 
Sbjct: 151 YAWGENTCGQVGKSVNINENTPMKVNSTLAGKTVICISCGQSSSMTVTDTGKVYGWGCND 210

Query: 381 FGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL 440
            GQLG G    +  P   +   L +V  K + CG  H   +++ G ++ WG N YGQLGL
Sbjct: 211 VGQLGIGNYVNQVDP--CEVTMLVDVVIKKIVCGYAHVLALSNKGALYVWGGNNYGQLGL 268

Query: 441 GDVIDRNIPSQVTIE 455
           G  ++   P Q+  E
Sbjct: 269 GMKMNMCNPVQLKQE 283



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 94/177 (53%), Gaps = 3/177 (1%)

Query: 299 GNYVKGIACG-GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGV 357
           G  +K  A G G H   +T+ G + ++G   +G+ G  ST+  +      +L    I  +
Sbjct: 75  GKNIKTFAYGKGPHVLALTEEGKVYSWGHNSHGELGNCSTNHMIPMPVTKNLNDEFIVDI 134

Query: 358 AAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARH 417
           A G  H++ ++++G VYA+G N  GQ+G   +  E  P  +++ +L       +SCG   
Sbjct: 135 ACGSHHSLALTNEGKVYAWGENTCGQVGKSVNINENTPMKVNS-TLAGKTVICISCGQSS 193

Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLA 473
           +  + D GKV+ WG N  GQLG+G+ +++  P +VT +   V + + CG+ H L L+
Sbjct: 194 SMTVTDTGKVYGWGCNDVGQLGIGNYVNQVDPCEVTMLVDVVIKKIVCGYAHVLALS 250



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 83/181 (45%), Gaps = 17/181 (9%)

Query: 297 VPGNYVKGIACG------GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLL 350
           +  NYV  I         G  + +IT    +   G    G  G G   +   P  V +L 
Sbjct: 15  LDSNYVSKIHMALVYGDLGNEALIITRDKIVYALGSNTSGCLGTGDACNTFYPKKVEALC 74

Query: 351 GIQIEGVAAGLW-HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSK 409
           G  I+  A G   H + ++ +G VY++G N  G+LG           ++  P  +N++ +
Sbjct: 75  GKNIKTFAYGKGPHVLALTEEGKVYSWGHNSHGELGNCSTN-----HMIPMPVTKNLNDE 129

Query: 410 ---SVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVAC 464
               ++CG+ H+  + ++GKV+ WG N  GQ+G    I+ N P +V  T+ G     ++C
Sbjct: 130 FIVDIACGSHHSLALTNEGKVYAWGENTCGQVGKSVNINENTPMKVNSTLAGKTVICISC 189

Query: 465 G 465
           G
Sbjct: 190 G 190



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 56/110 (50%), Gaps = 4/110 (3%)

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
           + I+ D  VYA G N  G LGTG       P+ ++A   +N+ + +   G  H   + ++
Sbjct: 37  LIITRDKIVYALGSNTSGCLGTGDACNTFYPKKVEALCGKNIKTFAYGKGP-HVLALTEE 95

Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQVT--IEGCVPRNVACGWWHTLLL 472
           GKV+ WG N +G+LG     +  IP  VT  +      ++ACG  H+L L
Sbjct: 96  GKVYSWGHNSHGELGNCST-NHMIPMPVTKNLNDEFIVDIACGSHHSLAL 144



 Score = 38.5 bits (88), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 12/110 (10%)

Query: 39  PLTVGS--AWRDVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPL 94
           P+ V S  A + V    CG   +M ++D+ K+  WG  +D+GQ  + +  +   P    +
Sbjct: 172 PMKVNSTLAGKTVICISCGQSSSMTVTDTGKVYGWGC-NDVGQLGIGNYVNQVDPCEVTM 230

Query: 95  PTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLD 144
             +  I K   G+AH +A++  G +Y WG       G  +G L  G  ++
Sbjct: 231 LVDVVIKKIVCGYAHVLALSNKGALYVWG-------GNNYGQLGLGMKMN 273


>gi|403362993|gb|EJY81232.1| TBC1 domain family member 12 [Oxytricha trifallax]
          Length = 1044

 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 99/204 (48%), Gaps = 34/204 (16%)

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
           +  Y  D+  +LS   +NS      +  +++  ++CG  HS ++T +G + +FG   YGQ
Sbjct: 209 QQKYAADQQISLSFSKLNS------IQSHFISQVSCGQSHSLLLTSSGFVYSFGKNEYGQ 262

Query: 332 CGQGSTDDELS-PNCVSSLLGIQIEGVAAGLWHTICISSDGD------------------ 372
            GQ S  D+L  P  +  LL +++  ++ G  H I I +  D                  
Sbjct: 263 LGQTSASDDLKEPTIIFQLLNLKVFSISCGQHHNIVIGTSRDTMASTFQIYSTESALFTT 322

Query: 373 -------VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDG 425
                  VY +G NQ+GQLG G D+   +P L++   L + + K V CG  HT ++ ++ 
Sbjct: 323 IDKNKTLVYGWGFNQYGQLGLGDDKNRNVPTLVEL--LLDYNFKKVKCGKNHTGLLDENS 380

Query: 426 KVFCWGWNKYGQLGLGDVIDRNIP 449
            +F +G N +GQ+G+    D+  P
Sbjct: 381 CLFIFGQNNHGQIGISTNDDQFTP 404



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 54/159 (33%), Positives = 78/159 (49%), Gaps = 29/159 (18%)

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLG-TGGDQAETLPRLLD 399
           LS + ++S+    I  V+ G  H++ ++S G VY+FG N++GQLG T        P ++ 
Sbjct: 220 LSFSKLNSIQSHFISQVSCGQSHSLLLTSSGFVYSFGKNEYGQLGQTSASDDLKEPTII- 278

Query: 400 APSLENVHSKSVSCGARHTAVI-----------------------ADDGK--VFCWGWNK 434
              L N+   S+SCG  H  VI                        D  K  V+ WG+N+
Sbjct: 279 -FQLLNLKVFSISCGQHHNIVIGTSRDTMASTFQIYSTESALFTTIDKNKTLVYGWGFNQ 337

Query: 435 YGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
           YGQLGLGD  +RN+P+ V  +     + V CG  HT LL
Sbjct: 338 YGQLGLGDDKNRNVPTLVELLLDYNFKKVKCGKNHTGLL 376



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 70/195 (35%), Gaps = 53/195 (27%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           I+ V+ G  H+L L+  G V+ +G    GQLG  S    +  P  I              
Sbjct: 233 ISQVSCGQSHSLLLTSSGFVYSFGKNEYGQLGQTSASDDLKEPTII-------------- 278

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVI-----------------------TDAG 319
                       F++    V  I+CG  H+ VI                        D  
Sbjct: 279 ------------FQLLNLKVFSISCGQHHNIVIGTSRDTMASTFQIYSTESALFTTIDKN 326

Query: 320 ALLTFGWGL--YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
             L +GWG   YGQ G G   +   P  V  LL    + V  G  HT  +  +  ++ FG
Sbjct: 327 KTLVYGWGFNQYGQLGLGDDKNRNVPTLVELLLDYNFKKVKCGKNHTGLLDENSCLFIFG 386

Query: 378 GNQFGQLG--TGGDQ 390
            N  GQ+G  T  DQ
Sbjct: 387 QNNHGQIGISTNDDQ 401


>gi|392355475|ref|XP_003752052.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Rattus
           norvegicus]
          Length = 608

 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 96/295 (32%), Positives = 141/295 (47%), Gaps = 39/295 (13%)

Query: 213 CLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLG-----SRIRMVSSPHP 267
           C+  L P  ++   A G  HTL  +D G V+  G   EGQLGLG          +    P
Sbjct: 118 CIKALKPE-KVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIGFFTP 176

Query: 268 IPCIES-SYGKDRSAALSRGSV------NSEG------------PGFRVPGNYVKGIACG 308
              I+  S G + SAAL+          NSEG            P     G  +  I+CG
Sbjct: 177 SDIIKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVTVGKPISWISCG 236

Query: 309 GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVS--SLLGI--QIEGVAAGLWHT 364
             HSA +T  G L TFG    G+ G     ++L  N  S   +LGI  ++  VA G  HT
Sbjct: 237 YYHSAFVTTDGELYTFGEPENGKLG---LPNQLLINHRSPQRVLGIPDKVIQVACGGGHT 293

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAET-LPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
           + + ++  VYAFG  QFGQLG G    ET  P+++D   +++     +SCG  HTA++ D
Sbjct: 294 VVL-TEKVVYAFGLGQFGQLGLGTFLFETSEPKIID--RIKDQKISHISCGENHTALMTD 350

Query: 424 DGKVFCWGWNKYGQLGLG--DVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLAVP 475
            G ++ +G  ++G+LGLG  +  ++  P+  +       + +ACG  H L+ A P
Sbjct: 351 IGLMYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLKFTVQLIACGGCHMLVFATP 405



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/243 (31%), Positives = 115/243 (47%), Gaps = 17/243 (6%)

Query: 245 WGYGGEGQLGLGSRIRMVSSPHP--IPCIESSYGKDRSAALSRGSVNSEGP---GFRVPG 299
           WG GG GQ    +R+     P    IP       +  S     G+V + G       +P 
Sbjct: 7   WGTGGLGQYLRPNRVAPAVFPKQAQIPFAAFGMAEPESLVPDTGAVFTFGKTKFAENIPS 66

Query: 300 NY-VKG-----IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ 353
            +  K      ++CG  H+A++T    L  FG   +GQ G GS      P C+ +L   +
Sbjct: 67  KFWFKNDVPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCIKALKPEK 126

Query: 354 IEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGG-DQAETLPRL-LDAPSLENVHSKSV 411
           ++  A G  HT+  +  G VYA GGN  GQLG G  D  +T  ++    PS      K +
Sbjct: 127 VKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIGFFTPS---DIIKQL 183

Query: 412 SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLL 471
           S GA  +A + +DGK+F WG N  GQ+GL +  +  IP +VT+ G     ++CG++H+  
Sbjct: 184 SAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVTV-GKPISWISCGYYHSAF 242

Query: 472 LAV 474
           +  
Sbjct: 243 VTT 245


>gi|24659266|gb|AAH38960.1| HERC3 protein [Homo sapiens]
          Length = 368

 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 112/251 (44%), Gaps = 30/251 (11%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
            I  VA G  H+LALSD GQ++ WG G +GQLGL +    V+ P  I             
Sbjct: 85  HIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ------------ 132

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDE 340
                         ++    +  ++CG  H   +   G   T+G   +GQ G G     +
Sbjct: 133 --------------KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
            SP  V SL GI +  VAAG  H+  +S  G V+ +G N  GQLG   ++    P  +  
Sbjct: 179 ASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKL 238

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVP 459
              + V    +SCG  HTAV+   G VF +G    GQLG   + D   P +V  + G   
Sbjct: 239 LRTQKV--VYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEV 296

Query: 460 RNVACGWWHTL 470
             +ACG  HTL
Sbjct: 297 TQIACGRQHTL 307



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 138/308 (44%), Gaps = 51/308 (16%)

Query: 84  KHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGL 143
           + G  PE      +  I+  A G +H +A+++ G++++WG           G L   T  
Sbjct: 70  REGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG-------AGSDGQLGLMTTE 122

Query: 144 DKDVFERQSSFLTEQVSPRSQVSRSSGG---TSSGTDGRGSGEEGSKRRRISLAKQTAES 200
           D     R    L ++++ ++ +  S G     +   DG+      +   ++ L K+    
Sbjct: 123 DSVAVPR----LIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 201 SSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR 260
           +S         P  V    G+ +A VAAGG H+ ALS  G V+GWG    GQLGL     
Sbjct: 179 AS---------PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE-- 227

Query: 261 MVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA 320
                           KDR +      + ++          V  I+CG  H+AV+T +G 
Sbjct: 228 ----------------KDRESPCHVKLLRTQ---------KVVYISCGEEHTAVLTKSGG 262

Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFGGN 379
           + TFG G  GQ G  S +DE++P  V  L+G ++  +A G  HT+  + S G +YAFG  
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 380 QFGQLGTG 387
             GQLGTG
Sbjct: 323 ARGQLGTG 330



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 117/253 (46%), Gaps = 34/253 (13%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  VA GG H++ L + G+V+  G   +GQLG     R  + P  I  +           
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG---HEREGNKPEQIGALAD--------- 83

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                             ++  +ACG  HS  ++D G L ++G G  GQ G  +T+D ++
Sbjct: 84  -----------------QHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA 126

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD-QAETLPRLLDA 400
            P  +  L    I  V+ G WH + +++DG  + +G N  GQLG G +  ++  P+ +  
Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVR- 185

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVP- 459
            SLE +    V+ G  H+  ++  G VF WG N  GQLGL D  DR  P  V +      
Sbjct: 186 -SLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKV 244

Query: 460 RNVACGWWHTLLL 472
             ++CG  HT +L
Sbjct: 245 VYISCGEEHTAVL 257



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 62/124 (50%), Gaps = 10/124 (8%)

Query: 354 IEGVAAGLWHTICISSDGDVYAFGGNQFGQLG--TGGDQAETLPRLLDAPSLENVHSKSV 411
           ++ VA G  H++ +  DG+VY  G N  GQLG    G++ E +  L D       H   V
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQIGALADQ------HIIHV 89

Query: 412 SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR-NIPSQV-TIEGCVPRNVACGWWHT 469
           +CG  H+  ++D G++F WG    GQLGL    D   +P  +  +       V+CG WH 
Sbjct: 90  ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149

Query: 470 LLLA 473
           L LA
Sbjct: 150 LALA 153



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 76/298 (25%), Positives = 116/298 (38%), Gaps = 60/298 (20%)

Query: 57  AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEG 116
           ++A+SD  +L +WG+  D     +T+     +P       + +I++ + G  HC+A+   
Sbjct: 96  SLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAAD 155

Query: 117 GEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGT 176
           G+ +TWG           G L    GL K+           Q SP  Q  RS  G     
Sbjct: 156 GQFFTWGKNS-------HGQL----GLGKE--------FPSQASP--QRVRSLEGIPLAQ 194

Query: 177 DGRGSGEEGSKRRRISLA-------KQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAG 229
              G    G+    +SL+          A      DE     PC V L    ++  ++ G
Sbjct: 195 VAAG----GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCG 250

Query: 230 GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVN 289
             HT  L+  G V+ +G G  GQLG  S   M    +P   +E                 
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDS---MNDEVNPRRVLE----------------- 290

Query: 290 SEGPGFRVPGNYVKGIACGGRHS-AVITDAGALLTFGWGLYGQCGQGSTDDELSPNCV 346
                  + G+ V  IACG +H+ A +  +G +  FG G  GQ G G T +   P+ V
Sbjct: 291 -------LMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 341


>gi|402901988|ref|XP_003913913.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
           [Papio anubis]
 gi|355754693|gb|EHH58594.1| hypothetical protein EGM_08474 [Macaca fascicularis]
          Length = 556

 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 124/253 (49%), Gaps = 31/253 (12%)

Query: 220 GVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
           G +IA+++ G G H +  +  G+V+ WG+    QLG G+     ++   +PC  S+    
Sbjct: 102 GKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT-----TNHGLVPCQIST---- 152

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
                             +    V  +ACG  HS V+T  G +  +G+   GQ G GST 
Sbjct: 153 -----------------NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTV 195

Query: 339 DELSPNCVSSLLGIQIE-GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
           ++  P  V+  L  ++   +A G    + +   G+VY +G N  GQLG G    +  P  
Sbjct: 196 NQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCR 255

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE-G 456
           + A  L+ +  + V+CG  HT V+ D+G+V+ WG N YGQLG G+  +++ P+ VT+E  
Sbjct: 256 VAA--LQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKD 313

Query: 457 CVPRNVACGWWHT 469
            +    AC   HT
Sbjct: 314 RIIEIAACHSTHT 326



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 60/166 (36%), Positives = 97/166 (58%), Gaps = 3/166 (1%)

Query: 309 GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS-LLGIQIEGVAAGLWHTICI 367
           G H  + T  G + T+G   Y Q G G+T+  L P  +S+ L   Q+  VA G +H++ +
Sbjct: 113 GPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVL 172

Query: 368 SSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKV 427
           +SDG+V+A+G N  GQ+G+G    + +PR +    L+N    +++CG      + D G+V
Sbjct: 173 TSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTG-CLQNKVVVTIACGQMCCMAVVDTGEV 231

Query: 428 FCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
           + WG+N  GQLGLG   ++  P +V  ++G   + VACG+ HTL+L
Sbjct: 232 YVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 277



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 70/231 (30%), Positives = 109/231 (47%), Gaps = 30/231 (12%)

Query: 203 SGDENLSAFPCLVTLN-PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +G  N    PC ++ N    ++  VA G  H+L L+  G+V+ WGY   GQ+G GS +  
Sbjct: 138 NGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVN- 196

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
                PIP         R     +  V             V  IACG      + D G +
Sbjct: 197 ----QPIP--------RRVTGCLQNKV-------------VVTIACGQMCCMAVVDTGEV 231

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             +G+   GQ G GS+ ++ +P  V++L GI+++ VA G  HT+ ++ +G VYA+G N +
Sbjct: 232 YVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSY 291

Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           GQLGTG    ++ P  +       +  +  +C + HT A     G V+ WG
Sbjct: 292 GQLGTGNKSNQSYPTPVTVEKDRII--EIAACHSTHTSAAKTQGGHVYMWG 340



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 3/105 (2%)

Query: 370 DGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFC 429
           + +++  G N  G LG G  Q+   PR LD+ S + + S S   G  H  +   +G+VF 
Sbjct: 69  NDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIASLSYGSGP-HIVLATTEGEVFT 127

Query: 430 WGWNKYGQLGLGDVIDRNIPSQVTIEGCVPR--NVACGWWHTLLL 472
           WG N Y QLG G      +P Q++      +   VACG +H+L+L
Sbjct: 128 WGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVL 172



 Score = 38.9 bits (89), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 55/133 (41%), Gaps = 17/133 (12%)

Query: 14  VFMWGYL-PGALPQRSPILSPLVVRLP--LTVGSAWRDVCGGGCGFAMAISDSRKLITWG 70
           VF WGY   G +   S +  P+  R+   L         CG  C   MA+ D+ ++  WG
Sbjct: 178 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMC--CMAVVDTGEVYVWG 235

Query: 71  STDDLGQSYVTSGKHGEIPEPFPLPTEASI--VKAAAGWAHCVAVTEGGEVYTWGWKECV 128
                G   +  G  G  P P  +     I   + A G+AH + +T+ G+VY WG     
Sbjct: 236 YN---GNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG----- 287

Query: 129 PSGRVFGDLSTGT 141
                +G L TG 
Sbjct: 288 --ANSYGQLGTGN 298


>gi|145512133|ref|XP_001441983.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124409255|emb|CAK74586.1| unnamed protein product [Paramecium tetraurelia]
          Length = 2041

 Score =  101 bits (252), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 72/247 (29%), Positives = 114/247 (46%), Gaps = 37/247 (14%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G+    +AAG  H+LAL+   QV+GWG    GQLG+G++             E+     +
Sbjct: 349 GLFFNEIAAGAYHSLALAKNNQVYGWGVNNRGQLGIGNK-------------ENQLLPKQ 395

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDD 339
                R  +  +             + CG +HSA IT    L T+G G Y + G G   D
Sbjct: 396 LTFFDRKKIQCQY------------LYCGDQHSACITTNKELYTWGNGDYYRLGHGMLLD 443

Query: 340 ELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ--AETLPRL 397
           E+ P  +  L  + +  VA G  H++CI+++G VYA+G ++   LG    Q   +TLP+ 
Sbjct: 444 EMEPKKIEILQDVYVLDVALGTIHSLCITNEGFVYAWGSSKDSVLGMPTQQYKDQTLPQR 503

Query: 398 --LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
             L + S  +     V+ G  H+  ++++G ++ WG NK   LG        +  Q    
Sbjct: 504 VGLMSQSFRDASFYQVAAGTSHSLSLSENGHLYVWGSNKNSLLG--------VRLQGQEH 555

Query: 456 GCVPRNV 462
            CVP+ V
Sbjct: 556 TCVPQKV 562



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 53/173 (30%), Positives = 93/173 (53%), Gaps = 3/173 (1%)

Query: 301 YVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAG 360
           +VK I CG  H+  +T+ GA+  +G G  G  G G  DD  +P  +  + G+    +AAG
Sbjct: 301 FVK-IVCGHHHTMALTEEGAVFIWGMGSQGCLGNGRVDDLETPTQID-ISGLFFNEIAAG 358

Query: 361 LWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
            +H++ ++ +  VY +G N  GQLG G  + + LP+ L     + +  + + CG +H+A 
Sbjct: 359 AYHSLALAKNNQVYGWGVNNRGQLGIGNKENQLLPKQLTFFDRKKIQCQYLYCGDQHSAC 418

Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACGWWHTLLL 472
           I  + +++ WG   Y +LG G ++D   P ++ I +     +VA G  H+L +
Sbjct: 419 ITTNKELYTWGNGDYYRLGHGMLLDEMEPKKIEILQDVYVLDVALGTIHSLCI 471



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 94/453 (20%), Positives = 173/453 (38%), Gaps = 86/453 (18%)

Query: 93  PLPTEASIVKAAAGWAHCVAVTEGGEVYTWGW--KECVPSGRVFGDLSTGTGLD-KDVFE 149
           P+  +   VK   G  H +A+TE G V+ WG   + C+ +GRV  DL T T +D   +F 
Sbjct: 294 PIALKQEFVKIVCGHHHTMALTEEGAVFIWGMGSQGCLGNGRV-DDLETPTQIDISGLFF 352

Query: 150 RQ---SSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISL---AKQTAESSSS 203
            +    ++ +  ++  +QV    G  + G  G G+ E     ++++     K   +    
Sbjct: 353 NEIAAGAYHSLALAKNNQVY-GWGVNNRGQLGIGNKENQLLPKQLTFFDRKKIQCQYLYC 411

Query: 204 GDENLSAF---------------------------PCLVTLNPGVRIATVAAGGRHTLAL 236
           GD++ +                             P  + +   V +  VA G  H+L +
Sbjct: 412 GDQHSACITTNKELYTWGNGDYYRLGHGMLLDEMEPKKIEILQDVYVLDVALGTIHSLCI 471

Query: 237 SDIGQVWGWGYGGEGQLGLGSR-IRMVSSPHPIPCIESSY----------GKDRSAALSR 285
           ++ G V+ WG   +  LG+ ++  +  + P  +  +  S+          G   S +LS 
Sbjct: 472 TNEGFVYAWGSSKDSVLGMPTQQYKDQTLPQRVGLMSQSFRDASFYQVAAGTSHSLSLSE 531

Query: 286 -------GSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
                  GS  +   G R+ G     +      S  +  +       + L  +  Q   D
Sbjct: 532 NGHLYVWGSNKNSLLGVRLQGQEHTCVPQKVEQSEDLEKSCIEKALFFNLKKEEQQMMKD 591

Query: 339 DELSPNCVSSLLGIQIEGVAA------------GLWHTICISSDGDVYAFGGNQFGQLGT 386
           ++L     ++L+   ++                G  +T  I + G +YA G NQ G L  
Sbjct: 592 EKLVTFEQTTLMKTILQSTMGQSHECKYKFATLGTKNTYFIDNTGHLYACGSNQKGMLCK 651

Query: 387 GGDQAETLPRLL---DAPSL--------------ENVHSKSVSCGARHTAVIADDGKVFC 429
              + +   + +   D P +               N   + +SC   H   +   G  +C
Sbjct: 652 NPHKKQKFKQFIPQKDPPDILFEQSFTPIEIVYFRNTIIRYISCQYNHCIAVTAKGNAYC 711

Query: 430 WGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNV 462
           WG N+Y QLGLG   D ++ + + +EG + + V
Sbjct: 712 WGSNQYNQLGLGFQSD-HVFTPILLEGAIEQKV 743



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/63 (39%), Positives = 34/63 (53%)

Query: 411 VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTL 470
           + CG  HT  + ++G VF WG    G LG G V D   P+Q+ I G     +A G +H+L
Sbjct: 304 IVCGHHHTMALTEEGAVFIWGMGSQGCLGNGRVDDLETPTQIDISGLFFNEIAAGAYHSL 363

Query: 471 LLA 473
            LA
Sbjct: 364 ALA 366



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 86/378 (22%), Positives = 142/378 (37%), Gaps = 87/378 (23%)

Query: 107  WAHCVAVTEGGEVYTWGWKEC------VPSGRVFGDLSTGTGLDKDVF------ERQSSF 154
            + HC+AVT  G  Y WG  +         S  VF  +     +++ V       E+ S+ 
Sbjct: 697  YNHCIAVTAKGNAYCWGSNQYNQLGLGFQSDHVFTPILLEGAIEQKVIIMAITGEKFSAL 756

Query: 155  LTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCL 214
            LT+Q     +V   S GTS        G  G + +   +  +           ++  P +
Sbjct: 757  LTDQ----GEVW--SFGTSE------FGVLGHELKNFYVIMEP--------RMINDIPSM 796

Query: 215  VTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLG-----SRIRMVSSPHPIP 269
            + L         A   +   A+    Q+W WG    GQLG+        I + ++     
Sbjct: 797  INL---------ACSNQTMFAIDQKQQLWAWGNNQFGQLGISLQRDEEEINLQTNKQ--- 844

Query: 270  CIESSYGKDRSAALSRGS------VNSEGPGFR-VPGN-YVKGIACGGRHSAVITDAGAL 321
             + S + + ++   S  +         + P  R + G  +V  ++CG  H+ +IT    L
Sbjct: 845  -VSSEFLEWKAQLKSLKNPERYIVYQPDKPSTRSITGEAFVDQVSCGLYHTCIITTNQEL 903

Query: 322  LTFGWGLY-GQCGQGSTDDELSP-------NCVSSLL---GIQIEGVAAGLWHTICISSD 370
            LT G   Y G   Q   D E          +  SS L     + + VA   +HT+ ++  
Sbjct: 904  LTCGLAKYAGHQSQEPEDPEQQQAQQAQFIDAFSSTLEHSSKKFKLVACHEYHTVAVTVS 963

Query: 371  GDVYAFG--------GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIA 422
             D+   G          +F  L   G Q            L+N+  K V+CG  H  ++ 
Sbjct: 964  SDLVFLGPEGKERGLHEKFANLFRDGKQMPV--------ELQNI--KFVACGPNHALILN 1013

Query: 423  DDGKVFCWGWNKYGQLGL 440
            D G+ + WG    G+LGL
Sbjct: 1014 DQGQTYTWGATMGGRLGL 1031



 Score = 50.1 bits (118), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 70/144 (48%), Gaps = 10/144 (6%)

Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDELSPNCVSSLLGIQIEGVA-A 359
           ++ I+C   H   +T  G    +G   Y Q G G  +D   +P  +   +  ++  +A  
Sbjct: 690 IRYISCQYNHCIAVTAKGNAYCWGSNQYNQLGLGFQSDHVFTPILLEGAIEQKVIIMAIT 749

Query: 360 GLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL--PRLL-DAPSLENVHSKSVSCGAR 416
           G   +  ++  G+V++FG ++FG LG        +  PR++ D PS+ N+     +C  +
Sbjct: 750 GEKFSALLTDQGEVWSFGTSEFGVLGHELKNFYVIMEPRMINDIPSMINL-----ACSNQ 804

Query: 417 HTAVIADDGKVFCWGWNKYGQLGL 440
               I    +++ WG N++GQLG+
Sbjct: 805 TMFAIDQKQQLWAWGNNQFGQLGI 828


>gi|426231463|ref|XP_004009758.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Ovis aries]
          Length = 1050

 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 139/308 (45%), Gaps = 51/308 (16%)

Query: 84  KHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGL 143
           + G  PE      +  IV  A G +H +A+++ G++++WG      +G   G L   T  
Sbjct: 70  REGNKPEQIGALADQHIVHVACGESHSLALSDQGQLFSWG------AGSD-GQLGLMTTE 122

Query: 144 DKDVFERQSSFLTEQVSPRSQVSRSSGG---TSSGTDGRGSGEEGSKRRRISLAKQTAES 200
           D     R    L ++++ ++ +  S G     +   DG+      +   ++ L K+    
Sbjct: 123 DSVAVPR----LIQKLNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQ 178

Query: 201 SSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR 260
           +S         P  V    G+ +A V AGG H+ ALS  G V+GWG    GQLGL     
Sbjct: 179 AS---------PQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE-- 227

Query: 261 MVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA 320
                           KDR +      + ++          V  I+CG  H+AV+T +G 
Sbjct: 228 ----------------KDRESPCHVKLLRTQK---------VVYISCGEEHTAVLTKSGG 262

Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFGGN 379
           + TFG G  GQ G  S +DE++P  V  L+G ++  +A G  HT+  + S G +YAFG  
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 380 QFGQLGTG 387
             GQLGTG
Sbjct: 323 ARGQLGTG 330



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 117/255 (45%), Gaps = 38/255 (14%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  VA GG H++ L + G+V+  G   +GQLG     R  + P  I  +           
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGANTKGQLG---HEREGNKPEQIGALAD--------- 83

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                             ++  +ACG  HS  ++D G L ++G G  GQ G  +T+D ++
Sbjct: 84  -----------------QHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVA 126

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD-QAETLPRLLDA 400
            P  +  L    I  V+ G WH + +++DG  + +G N  GQLG G +  ++  P+    
Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQ--RV 184

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI---EGC 457
            SLE +    V  G  H+  ++  G VF WG N  GQLGL D  DR  P  V +   +  
Sbjct: 185 RSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKV 244

Query: 458 VPRNVACGWWHTLLL 472
           V   ++CG  HT +L
Sbjct: 245 V--YISCGEEHTAVL 257



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 81/261 (31%), Positives = 112/261 (42%), Gaps = 34/261 (13%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP------CIESSY 275
            I  VA G  H+LALSD GQ++ WG G +GQLGL +    V+ P  I        ++ S 
Sbjct: 85  HIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSC 144

Query: 276 GKDRSAALS---------RGSVNSEGPGFRVP------------GNYVKGIACGGRHSAV 314
           G     AL+         R S    G G   P            G  +  +  GG HS  
Sbjct: 145 GNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFA 204

Query: 315 ITDAGALLTFGWGLY--GQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGD 372
           ++ +GA+  FGWG+   GQ G     D  SP  V  L   ++  ++ G  HT  ++  G 
Sbjct: 205 LSLSGAV--FGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 373 VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           V+ FG    GQLG      E  PR      L       ++CG +HT A +   G ++ +G
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPR--RVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 320

Query: 432 WNKYGQLGLGDVIDRNIPSQV 452
               GQLG G   +   PS V
Sbjct: 321 CGARGQLGTGHTCNVKCPSPV 341



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 62/124 (50%), Gaps = 10/124 (8%)

Query: 354 IEGVAAGLWHTICISSDGDVYAFGGNQFGQLG--TGGDQAETLPRLLDAPSLENVHSKSV 411
           ++ VA G  H++ +  DG+VY  G N  GQLG    G++ E +  L D       H   V
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGANTKGQLGHEREGNKPEQIGALADQ------HIVHV 89

Query: 412 SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR-NIPSQV-TIEGCVPRNVACGWWHT 469
           +CG  H+  ++D G++F WG    GQLGL    D   +P  +  +       V+CG WH 
Sbjct: 90  ACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149

Query: 470 LLLA 473
           L LA
Sbjct: 150 LALA 153


>gi|326918486|ref|XP_003205519.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
           [Meleagris gallopavo]
          Length = 1050

 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 90/292 (30%), Positives = 135/292 (46%), Gaps = 51/292 (17%)

Query: 100 IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQV 159
           IV  A G +H VA+++ G+V++WG      +G   G L   T  D     R    L +++
Sbjct: 86  IVHVACGESHSVALSDQGQVFSWG------AGSD-GQLGLTTIEDAVTVPR----LIKKL 134

Query: 160 SPRSQVSRSSGG---TSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVT 216
           + ++ +  S G     +   DG+      +   ++ L K+    +S         P  V 
Sbjct: 135 NQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQAS---------PQRVK 185

Query: 217 LNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYG 276
              G+ +A VAAGG H+ ALS  G V+GWG    GQLGL                     
Sbjct: 186 SLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDE------------------ 227

Query: 277 KDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGS 336
           +DR +      + S+          V  I+CG  H+AV+T +G + TFG G  GQ G  S
Sbjct: 228 RDRESPCHVKLLRSQK---------VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDS 278

Query: 337 TDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFGGNQFGQLGTG 387
            +DE++P  V  L+G ++  +A G  HT+  + S G +YAFG    GQLGTG
Sbjct: 279 MNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTG 330



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 119/255 (46%), Gaps = 34/255 (13%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
            +  VA GG H++ L + G+V+  G   +GQLG  S     S P  I             
Sbjct: 35  NVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHESE---GSKPELI------------G 79

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL 341
           AL+              G ++  +ACG  HS  ++D G + ++G G  GQ G  + +D +
Sbjct: 80  ALA--------------GQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAV 125

Query: 342 S-PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD-QAETLPRLLD 399
           + P  +  L    I  ++ G WH + +++DG  + +G N +GQLG G +  ++  P+   
Sbjct: 126 TVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQ--R 183

Query: 400 APSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCV 458
             SL+ +    V+ G  H+  ++  G VF WG N  GQLGL D  DR  P  V  +    
Sbjct: 184 VKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQK 243

Query: 459 PRNVACGWWHTLLLA 473
              ++CG  HT +L 
Sbjct: 244 VVYISCGEEHTAVLT 258



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 86/279 (30%), Positives = 119/279 (42%), Gaps = 34/279 (12%)

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
           G E+  + P L+    G  I  VA G  H++ALSD GQV+ WG G +GQLGL +    V+
Sbjct: 67  GHESEGSKPELIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVT 126

Query: 264 SPHPIP------CIESSYGKDRSAALS---------RGSVNSEGPGFRVP---------- 298
            P  I        ++ S G     AL+         + S    G G   P          
Sbjct: 127 VPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKS 186

Query: 299 --GNYVKGIACGGRHSAVITDAGALLTFGWGLY--GQCGQGSTDDELSPNCVSSLLGIQI 354
             G  +  +A GG HS  ++ +GA+  FGWG    GQ G     D  SP  V  L   ++
Sbjct: 187 LDGIPLAQVAAGGAHSFALSLSGAV--FGWGKNSSGQLGLSDERDRESPCHVKLLRSQKV 244

Query: 355 EGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
             ++ G  HT  ++  G V+ FG    GQLG      E  PR      L       ++CG
Sbjct: 245 VYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPR--RVLELMGSEVSQIACG 302

Query: 415 ARHT-AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
             HT A +   G ++ +G    GQLG G   +   PS V
Sbjct: 303 RHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPV 341



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 78/157 (49%), Gaps = 8/157 (5%)

Query: 321 LLTFGWGLYGQCGQGSTDDEL--SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
           +L +G+  +GQ G GS    +   P     +    ++ VA G  H++ +  DG+VY  G 
Sbjct: 1   MLCWGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
           N  GQLG   + ++  P L+ A  L   H   V+CG  H+  ++D G+VF WG    GQL
Sbjct: 61  NTKGQLGHESEGSK--PELIGA--LAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQL 116

Query: 439 GLGDVIDR-NIPSQVT-IEGCVPRNVACGWWHTLLLA 473
           GL  + D   +P  +  +       ++CG WH L LA
Sbjct: 117 GLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALA 153



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 79/320 (24%), Positives = 125/320 (39%), Gaps = 63/320 (19%)

Query: 39  PLTVGS-AWRDVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLP 95
           P  +G+ A + +    CG   ++A+SD  ++ +WG+  D      T      +P      
Sbjct: 75  PELIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKL 134

Query: 96  TEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFL 155
            + +I++ + G  HC+A+   G+ +TWG          +G L    GL K+         
Sbjct: 135 NQQTILQISCGNWHCLALAADGQFFTWGQNS-------YGQL----GLGKEC-------- 175

Query: 156 TEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLA-------KQTAESSSSGDENL 208
             Q SP  Q  +S  G        G    G+    +SL+       K ++      DE  
Sbjct: 176 PSQASP--QRVKSLDGIPLAQVAAG----GAHSFALSLSGAVFGWGKNSSGQLGLSDERD 229

Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
              PC V L    ++  ++ G  HT  L+  G V+ +G G  GQLG  S   M    +P 
Sbjct: 230 RESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDS---MNDEVNPR 286

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHS-AVITDAGALLTFGWG 327
             +E                        + G+ V  IACG  H+ A +  +G +  FG G
Sbjct: 287 RVLE------------------------LMGSEVSQIACGRHHTLAFVPSSGMIYAFGCG 322

Query: 328 LYGQCGQGSTDDELSPNCVS 347
             GQ G G T +   P+ V 
Sbjct: 323 TRGQLGTGHTCNVKCPSPVK 342


>gi|330836303|ref|YP_004410944.1| cell wall/surface repeat protein [Sphaerochaeta coccoides DSM
           17374]
 gi|329748206|gb|AEC01562.1| cell wall/surface repeat protein [Sphaerochaeta coccoides DSM
           17374]
          Length = 950

 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 84/295 (28%), Positives = 132/295 (44%), Gaps = 41/295 (13%)

Query: 216 TLNPGVR-IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR---------------- 258
           TLN  +  +  V+ G RHT+ L   G +W  G    GQLGLGS+                
Sbjct: 625 TLNDFMTDVVAVSTGERHTMILKKDGTLWATGKNYFGQLGLGSQEPDRSTPTQVTFMGTD 684

Query: 259 IRMVSSPHPIPCIES------SYGKDRSAALSRGSVNSEGPGFRVPGNY--------VKG 304
           +  VS+ H    I        + G +    L  G+ ++     +V  +         V  
Sbjct: 685 VAAVSTGHSYTMILKKDDTLWATGFNSYGQLGDGTTSNRTSPVQVKASTTLNDFMTDVAA 744

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           ++ G  H+ ++   G L   G    GQ G  +  D  +P  V+S +G  +  V+AG  HT
Sbjct: 745 VSTGDDHTMILKKDGTLWAIGRNYSGQLGDDTQTDRSTPVQVTS-MGTDVAAVSAGGNHT 803

Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPS----LENVHSKSVSCGARHTAV 420
           + +  DG ++  G N FGQLG        +P  +        + +V  K+ S G  HT +
Sbjct: 804 LILKKDGTLWVTGYNGFGQLGDSTTDNRNMPVQVKGSGGVGFMTDV--KAASAGMYHTMI 861

Query: 421 IADDGKVFCWGWNKYGQLGLGDV---IDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           +  DG ++  G N++GQLGLGD      R+IP Q+T  G    +V+ G +HT++L
Sbjct: 862 LKKDGTLWATGGNEFGQLGLGDSGSETSRSIPVQITSMGNDVADVSTGRFHTMIL 916



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 113/244 (46%), Gaps = 36/244 (14%)

Query: 216 TLNPGVR-IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESS 274
           TLN  +  +A V+ G  HT+ L   G +W  G    GQLG  ++                
Sbjct: 734 TLNDFMTDVAAVSTGDDHTMILKKDGTLWAIGRNYSGQLGDDTQ---------------- 777

Query: 275 YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
              DRS  +   S+ ++          V  ++ GG H+ ++   G L   G+  +GQ G 
Sbjct: 778 --TDRSTPVQVTSMGTD----------VAAVSAGGNHTLILKKDGTLWVTGYNGFGQLGD 825

Query: 335 GSTDDELSPNCVSSLLGI----QIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
            +TD+   P  V    G+     ++  +AG++HT+ +  DG ++A GGN+FGQLG G   
Sbjct: 826 STTDNRNMPVQVKGSGGVGFMTDVKAASAGMYHTMILKKDGTLWATGGNEFGQLGLGDSG 885

Query: 391 AETLPRL-LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL-GDVIDRNI 448
           +ET   + +   S+ N     VS G  HT ++  DG ++  G N + QLG  GD   R  
Sbjct: 886 SETSRSIPVQITSMGN-DVADVSTGRFHTMILKKDGTLWATGRNNFAQLGNGGDTSVRTT 944

Query: 449 PSQV 452
           P Q+
Sbjct: 945 PVQI 948



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 47/130 (36%), Positives = 71/130 (54%), Gaps = 4/130 (3%)

Query: 352 IQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLEN---VHS 408
           ++I+ V+AG ++TI +  DG ++A G N +GQLG G       P  + A +  N      
Sbjct: 574 VKIKAVSAGDYYTIILKMDGTLWATGQNTYGQLGDGTLINRYTPVQVKASTTLNDFMTDV 633

Query: 409 KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVI-DRNIPSQVTIEGCVPRNVACGWW 467
            +VS G RHT ++  DG ++  G N +GQLGLG    DR+ P+QVT  G     V+ G  
Sbjct: 634 VAVSTGERHTMILKKDGTLWATGKNYFGQLGLGSQEPDRSTPTQVTFMGTDVAAVSTGHS 693

Query: 468 HTLLLAVPPT 477
           +T++L    T
Sbjct: 694 YTMILKKDDT 703



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 84/183 (45%), Gaps = 28/183 (15%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
           P  VT + G  +A V+AGG HTL L   G +W  GY G GQLG                 
Sbjct: 783 PVQVT-SMGTDVAAVSAGGNHTLILKKDGTLWVTGYNGFGQLG----------------- 824

Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
           +S+          +G   S G GF      VK  + G  H+ ++   G L   G   +GQ
Sbjct: 825 DSTTDNRNMPVQVKG---SGGVGFMTD---VKAASAGMYHTMILKKDGTLWATGGNEFGQ 878

Query: 332 CGQGSTDDELS---PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGG 388
            G G +  E S   P  ++S +G  +  V+ G +HT+ +  DG ++A G N F QLG GG
Sbjct: 879 LGLGDSGSETSRSIPVQITS-MGNDVADVSTGRFHTMILKKDGTLWATGRNNFAQLGNGG 937

Query: 389 DQA 391
           D +
Sbjct: 938 DTS 940


>gi|449481391|ref|XP_004156169.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Cucumis sativus]
          Length = 472

 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 109/370 (29%), Positives = 153/370 (41%), Gaps = 65/370 (17%)

Query: 89  PEPFPLPTEASI--VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGT----G 142
           P+ F  P E +   +  A G  H  AV   G ++TWG  +       FG L  GT     
Sbjct: 49  PDLFGCPGEINSRWLDIACGREHTAAVASDGSLFTWGAND-------FGQLGDGTEEKSK 101

Query: 143 LDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGS-KRRRISLAKQTAESS 201
           L K V + Q  F+          S S G   +         +G+   RR+ +  Q   S+
Sbjct: 102 LPKKVNQLQGEFVK---------SVSCGAHCTAAIAEPRENDGTLSTRRLWIWGQNQGSN 152

Query: 202 SSGDENLSAFPCLV--TLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
                    FP L      P   I  V+ G  H +ALSD GQ+  WGY   GQLG G   
Sbjct: 153 ---------FPRLFWGAFTPQTIIRQVSCGAVHVVALSDDGQLQAWGYNEYGQLGRGVTS 203

Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAG 319
             +     I    +++ K             E P        +  ++CG  HSA I++ G
Sbjct: 204 EGLQGARII----NAFAK----------FLDEAPELVT----ITKVSCGEYHSAAISENG 245

Query: 320 ALLTFGWGLYGQ---CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAF 376
            + T+G G  GQ   C   S D EL P  V +L GI ++ +A G  HT  I+ +G +YA+
Sbjct: 246 EVYTWGLGSMGQLGHCSLQSADKELIPRRVVALDGICVKDIACGGVHTCAITQNGSLYAW 305

Query: 377 GGN---------QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKV 427
           GG          Q G        +ET  R L    + +   + V+CG  HT V   DG++
Sbjct: 306 GGGQVGQLGVGPQTGFFSCIAGDSETFLRNLPVVVVSD-GVQHVACGHSHTLVSTKDGRI 364

Query: 428 FCWGWNKYGQ 437
             WG+N YGQ
Sbjct: 365 HGWGYNSYGQ 374



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 77/311 (24%), Positives = 118/311 (37%), Gaps = 89/311 (28%)

Query: 229 GGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI-PCIESSYGKDRSAALSRGS 287
           G    ++L     ++ WGY   GQ G   +   +  P  + P +    G+  S  L    
Sbjct: 8   GMTQNVSLPRKSAIYVWGYNQSGQTGRKGKDHQLRVPRQLHPDLFGCPGEINSRWLD--- 64

Query: 288 VNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVS 347
                            IACG  H+A +   G+L T+G   +GQ G G+ +    P  V+
Sbjct: 65  -----------------IACGREHTAAVASDGSLFTWGANDFGQLGDGTEEKSKLPKKVN 107

Query: 348 SLLGIQIEGVAAG---------------------LW------------------------ 362
            L G  ++ V+ G                     LW                        
Sbjct: 108 QLQGEFVKSVSCGAHCTAAIAEPRENDGTLSTRRLWIWGQNQGSNFPRLFWGAFTPQTII 167

Query: 363 --------HTICISSDGDVYAFGGNQFGQLG--------TGGDQAETLPRLLD-APSLEN 405
                   H + +S DG + A+G N++GQLG         G        + LD AP L  
Sbjct: 168 RQVSCGAVHVVALSDDGQLQAWGYNEYGQLGRGVTSEGLQGARIINAFAKFLDEAPELVT 227

Query: 406 VHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG---LGDVIDRNIPSQVT-IEGCVPRN 461
           +    VSCG  H+A I+++G+V+ WG    GQLG   L       IP +V  ++G   ++
Sbjct: 228 I--TKVSCGEYHSAAISENGEVYTWGLGSMGQLGHCSLQSADKELIPRRVVALDGICVKD 285

Query: 462 VACGWWHTLLL 472
           +ACG  HT  +
Sbjct: 286 IACGGVHTCAI 296


>gi|224083557|ref|XP_002307065.1| predicted protein [Populus trichocarpa]
 gi|222856514|gb|EEE94061.1| predicted protein [Populus trichocarpa]
          Length = 419

 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 78/266 (29%), Positives = 123/266 (46%), Gaps = 46/266 (17%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR-MVSSPHPIPCIESSYGKDRS 280
            I  ++AG  H+ A++  G+++ WG    GQLGLG +   +V  P  + C+         
Sbjct: 118 EIVQISAGYHHSCAITVDGELYTWGKNSNGQLGLGKKAENVVPVPTKVECL--------- 168

Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ--------- 331
                             G  +K +A    HS  +TD G  L++G G  G+         
Sbjct: 169 -----------------SGINIKMVALASEHSIAVTDGGQALSWGGGGSGRLGHGHQSSL 211

Query: 332 CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
            G   +  E +P  +  L G++++ +AAGL H+ CI  +G VY FG     +L  G    
Sbjct: 212 LGFFRSSSEYTPRHIKKLEGVKVKNIAAGLLHSACIDENGSVYIFGEKAVDKLAFGDANN 271

Query: 392 ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
            T P ++        +S+ V+CG  HT VI   G+++ WG N+ G LG G +   +IP +
Sbjct: 272 ATTPSMIGKLP----YSQEVACGGYHTCVITSGGELYTWGSNENGCLGNGSIDVLHIPER 327

Query: 452 VTIEGCVPRN----VACGWWHTLLLA 473
           V  EG   R+    V+CGW HT  ++
Sbjct: 328 V--EGPFLRSPVEKVSCGWKHTAAIS 351



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 110/394 (27%), Positives = 162/394 (41%), Gaps = 68/394 (17%)

Query: 97  EASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLT 156
            +++   + G AH + +TE G VY  G  +       FG L         +   + S L 
Sbjct: 64  NSNLKSISCGGAHTLFLTETGRVYATGLND-------FGQLGVSNNTTYCMEPLEVSGLK 116

Query: 157 EQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVT 216
           +++   S     S   +   DG       +   ++ L K+         EN+   P  V 
Sbjct: 117 KEIVQISAGYHHSCAIT--VDGELYTWGKNSNGQLGLGKKA--------ENVVPVPTKVE 166

Query: 217 LNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEG------QLGLGSRIRMVS--SPHPI 268
              G+ I  VA    H++A++D GQ   WG GG G      Q  L    R  S  +P  I
Sbjct: 167 CLSGINIKMVALASEHSIAVTDGGQALSWGGGGSGRLGHGHQSSLLGFFRSSSEYTPRHI 226

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL 328
             +E                          G  VK IA G  HSA I + G++  FG   
Sbjct: 227 KKLE--------------------------GVKVKNIAAGLLHSACIDENGSVYIFGEKA 260

Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGG 388
             +   G  ++  +P+ +  L   Q   VA G +HT  I+S G++Y +G N+ G LG G 
Sbjct: 261 VDKLAFGDANNATTPSMIGKLPYSQ--EVACGGYHTCVITSGGELYTWGSNENGCLGNGS 318

Query: 389 DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGW------------NKYG 436
                +P  ++ P L +   K VSCG +HTA I+ +G VF WGW            +  G
Sbjct: 319 IDVLHIPERVEGPFLRSPVEK-VSCGWKHTAAIS-EGNVFTWGWGGSHGTFSEDGLSSGG 376

Query: 437 QLGLGDVIDRNIPSQVTIEGCVPR-NVACGWWHT 469
           QLG GD  D   P+ V  E  +    V+CG+ HT
Sbjct: 377 QLGHGDDFDYVNPTLVAFEKKMKALEVSCGFNHT 410



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 40/66 (60%)

Query: 377 GGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYG 436
           G   +G+LG G   +   P+L+++ S  N + KS+SCG  HT  + + G+V+  G N +G
Sbjct: 36  GNGDYGRLGYGNLDSMWRPKLMNSSSFHNSNLKSISCGGAHTLFLTETGRVYATGLNDFG 95

Query: 437 QLGLGD 442
           QLG+ +
Sbjct: 96  QLGVSN 101


>gi|350419254|ref|XP_003492121.1| PREDICTED: secretion-regulating guanine nucleotide exchange
           factor-like [Bombus impatiens]
          Length = 727

 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 127/278 (45%), Gaps = 47/278 (16%)

Query: 210 AFPCLV-----TLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSS 264
             PC V     +L P  +I  +  G  HTL L D G+V+  G+  +GQ+G  ++      
Sbjct: 26  VLPCEVDLSKCSLEPK-KIKKIVGGAGHTLILDDSGRVYSCGWNNKGQVGFPTK------ 78

Query: 265 PHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTF 324
                           + LS   +N      ++    +  IACG   SA +T  G LL +
Sbjct: 79  ---------------DSILSFRELNE-----KLKNKVIVDIACGWDCSAALTIEGTLLLW 118

Query: 325 GWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQL 384
           G   +GQ G+     + +      + G +I+G++ GL HT+ ++ D  +   G    GQL
Sbjct: 119 GSNRFGQLGKHPNSLQWTHEPFEVVTGRKIKGISMGLRHTVLLTEDCKILVAGTGSKGQL 178

Query: 385 GTGG-------DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQ 437
           G          + A +   +L    +E     SVSCG  HT  +A DG ++ +G NKYGQ
Sbjct: 179 GLSFSNSKGSLNAAYSFTEVLTLSDIE-----SVSCGQYHTIAVAKDGNIYAFGDNKYGQ 233

Query: 438 LGLG-DVIDRN-IPSQVT-IEGCVPRNVACGWWHTLLL 472
           LGL  D   +  IP +++ ++  +P N+  GW H ++L
Sbjct: 234 LGLNTDACPKTFIPIKLSDVQFKLPINMYSGWSHVIVL 271



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 78/160 (48%), Gaps = 9/160 (5%)

Query: 320 ALLTFGWGLYGQCGQGSTDDELSPNC-----VSSLLGIQIEGVAAGLWHTICISSDGDVY 374
           +L+++G   +GQ GQG   +E    C       SL   +I+ +  G  HT+ +   G VY
Sbjct: 4   SLMSWGANSHGQLGQGIESEECVLPCEVDLSKCSLEPKKIKKIVGGAGHTLILDDSGRVY 63

Query: 375 AFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNK 434
           + G N  GQ+G     +    R L+   L+N     ++CG   +A +  +G +  WG N+
Sbjct: 64  SCGWNNKGQVGFPTKDSILSFRELN-EKLKNKVIVDIACGWDCSAALTIEGTLLLWGSNR 122

Query: 435 YGQLGL--GDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
           +GQLG     +   + P +V + G   + ++ G  HT+LL
Sbjct: 123 FGQLGKHPNSLQWTHEPFEV-VTGRKIKGISMGLRHTVLL 161



 Score = 38.5 bits (88), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 11/99 (11%)

Query: 29  PI-LSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGE 87
           PI LS +  +LP+ + S W  V          + +   +  WG  +  GQ  +   +   
Sbjct: 247 PIKLSDVQFKLPINMYSGWSHVI---------VLNDNNIFGWGR-NTYGQLGIIKLEKPS 296

Query: 88  IPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKE 126
           I +   +     + + +AG  H VA+TE GE+  WGW E
Sbjct: 297 IWKATRIENLPKVHRVSAGSEHNVALTENGEILCWGWNE 335


>gi|332025816|gb|EGI65973.1| X-linked retinitis pigmentosa GTPase regulator [Acromyrmex
           echinatior]
          Length = 771

 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 80/264 (30%), Positives = 122/264 (46%), Gaps = 48/264 (18%)

Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
           G RI  +AAG  H++AL+  G V  WG   EGQLGL     +V  P  +P  E       
Sbjct: 190 GPRIIQLAAGSHHSMALTSDGGVVAWGSNLEGQLGLPEISGLVYKPMKVPIPEP------ 243

Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDD 339
                                 VK I+ G  HS  +T++G +   G    G+ G      
Sbjct: 244 ----------------------VKEISAGYYHSVFLTESGLIYICGESESGKLG------ 275

Query: 340 ELSPNCVSSLLGIQIE------GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAET 393
            L+ N  + +   Q++       VA G  HT  ++ +G++Y  G N  GQLG G +  ET
Sbjct: 276 -LNINFSTQVAPKQMQLPAPALHVACGGHHTFILAENGNIYCSGSNASGQLGMGINVNET 334

Query: 394 -LPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
             P+LL   +L++     + CG  H+A++ + GK+F  G  ++G+LGL +  + N   +V
Sbjct: 335 PTPKLLPRGALQDEKIIKIVCGESHSAILTESGKLFTCGDGRHGKLGLEE--NENNVHEV 392

Query: 453 TI----EGCVPRNVACGWWHTLLL 472
           T     +     NVACG  HT+L+
Sbjct: 393 TFAVKYQELFVSNVACGGCHTILV 416



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 59/185 (31%), Positives = 91/185 (49%), Gaps = 11/185 (5%)

Query: 295 FRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQI 354
           F +  + V  I CG  HSAV+   G L  FG   +GQ G G  +    P+CV  L   ++
Sbjct: 77  FFIRKDPVVIIECGDEHSAVVCQTGRLFIFGSNDWGQLGLGHRNHISKPSCVKILKPERV 136

Query: 355 EGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG----GDQAETLPRLLDAPSLENVHSKS 410
             VA G  HT+  +    ++A G NQ GQLG      GD + + P L+    L       
Sbjct: 137 THVACGRAHTLICTGAQKIFACGSNQEGQLGRENSVIGDSSSS-PILIYDCGLAGPRIIQ 195

Query: 411 VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDV---IDRNIPSQVTIEGCVPRNVACGWW 467
           ++ G+ H+  +  DG V  WG N  GQLGL ++   + +  P +V I   V + ++ G++
Sbjct: 196 LAAGSHHSMALTSDGGVVAWGSNLEGQLGLPEISGLVYK--PMKVPIPEPV-KEISAGYY 252

Query: 468 HTLLL 472
           H++ L
Sbjct: 253 HSVFL 257



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 113/264 (42%), Gaps = 51/264 (19%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  +  G  H+  +   G+++ +G    GQLGLG R   +S P  +  ++          
Sbjct: 84  VVIIECGDEHSAVVCQTGRLFIFGSNDWGQLGLGHR-NHISKPSCVKILKPE-------- 134

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST---DD 339
                              V  +ACG  H+ + T A  +   G    GQ G+ ++   D 
Sbjct: 135 ------------------RVTHVACGRAHTLICTGAQKIFACGSNQEGQLGRENSVIGDS 176

Query: 340 ELSPNCVSS--LLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
             SP  +    L G +I  +AAG  H++ ++SDG V A+G N  GQLG        LP +
Sbjct: 177 SSSPILIYDCGLAGPRIIQLAAGSHHSMALTSDGGVVAWGSNLEGQLG--------LPEI 228

Query: 398 -------LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNI-P 449
                  +  P  E V  K +S G  H+  + + G ++  G ++ G+LGL       + P
Sbjct: 229 SGLVYKPMKVPIPEPV--KEISAGYYHSVFLTESGLIYICGESESGKLGLNINFSTQVAP 286

Query: 450 SQVTIEGCVPRNVACGWWHTLLLA 473
            Q+ +      +VACG  HT +LA
Sbjct: 287 KQMQLPAPA-LHVACGGHHTFILA 309


>gi|326668760|ref|XP_686789.5| PREDICTED: e3 ubiquitin-protein ligase HERC2, partial [Danio rerio]
          Length = 3645

 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 130/306 (42%), Gaps = 80/306 (26%)

Query: 218  NPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
            N  V+   V +GGRH +AL+  G+V+ WG G +G+LG  SR+     P  I  +++   +
Sbjct: 1853 NYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIR 1911

Query: 278  DRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST 337
            D                          IACG  HSA IT +G L ++G G YG+ G G  
Sbjct: 1912 D--------------------------IACGSSHSAAITSSGELYSWGLGEYGRLGHGDN 1945

Query: 338  DDELSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLP 395
              +L P  V  LLG ++  VA G     T+ ++ +G V+++G   FG+LG GG +   +P
Sbjct: 1946 TTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEGMVFSWGDGDFGKLGRGGSEGCNIP 2005

Query: 396  RLLDAPSLE------------------------------------NVHSKS--------- 410
            + ++  + +                                    +VH +          
Sbjct: 2006 QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRG 2065

Query: 411  -----VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVAC 464
                 V+ GA H   + + G+VF WG N +GQ G G       P+ V  +EG     VAC
Sbjct: 2066 KKIVHVAVGALHCLAVTETGQVFAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVAC 2125

Query: 465  GWWHTL 470
            G  H++
Sbjct: 2126 GSSHSV 2131



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 106/366 (28%), Positives = 147/366 (40%), Gaps = 84/366 (22%)

Query: 101  VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
            V   +G  HC+A++  GE+Y+WG  E         D   G G ++   +R    + E + 
Sbjct: 2853 VAVNSGGKHCLALSSEGELYSWGEAE---------DGKLGHG-NRSPCDRPR--VIESLR 2900

Query: 161  PRSQVSRSSGGTSSGTDGRGSGEEGS--KRRRISLAKQTAESSSSGDENLSAFPCLVTLN 218
                V  ++GG  S      SGE  +  K R   L          GD      P LV   
Sbjct: 2901 GVEVVDIAAGGAHSACIT-ASGELYTWGKGRYGRLGH--------GDSEDQLKPKLVEAL 2951

Query: 219  PGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYG 276
             G R+  VA  +G   TL L+D   VW WG G  G+LG G                   G
Sbjct: 2952 QGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRG-------------------G 2992

Query: 277  KDRSAALSRGSVNSEGPGFRVPGNY-------VKGIACGGRHSAVITDAGALLTFGWGLY 329
             D               G +VP          V  + CG + S  +T +GA+ T+G G Y
Sbjct: 2993 SD---------------GCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 3037

Query: 330  GQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD 389
             + G GS D    P  V  L G ++  +A G  H +C + DG+VY +G N  GQLG G  
Sbjct: 3038 HRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTT 3097

Query: 390  QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIP 449
             A   PRL+ A  L+      V+CG+ HT           W  +K    G        +P
Sbjct: 3098 NAIQRPRLVAA--LQGKKINRVACGSAHT---------LAWSTSKPTNAG-------KLP 3139

Query: 450  SQVTIE 455
            +QV +E
Sbjct: 3140 AQVPME 3145



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 117/412 (28%), Positives = 162/412 (39%), Gaps = 86/412 (20%)

Query: 55   GFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVT 114
            G   A +   K+  WG  +D  Q     G   ++P      +  ++V+ A G     AVT
Sbjct: 1759 GLESAATIRTKVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT 1817

Query: 115  EGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSS 174
              G+VY  G      +GR+   LS+GT        RQ S L+  V  +  V+  SGG  +
Sbjct: 1818 AEGKVYACGE---ATNGRLGLGLSSGT----IPIPRQISALSNYVVKK--VAVHSGGRHA 1868

Query: 175  ---GTDGR----GSGEEGS----------KRRRISLAK------------QTAESSSSG- 204
                 DG+    G G++G           K R I   K             +A  +SSG 
Sbjct: 1869 MALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGE 1928

Query: 205  ---------------DENLSAFPCLVTLNPGVRIATVAAGGR--HTLALSDIGQVWGWGY 247
                           D      P LV +  G R+  VA G R   TLAL+D G V+ WG 
Sbjct: 1929 LYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEGMVFSWGD 1988

Query: 248  GGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIAC 307
            G  G+LG G      S    IP                   N E    R+ G  V  I C
Sbjct: 1989 GDFGKLGRGG-----SEGCNIP------------------QNIE----RLNGQGVCQIEC 2021

Query: 308  GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICI 367
            G + S  +T +G + T+G G Y + G G+      P  V  L G +I  VA G  H + +
Sbjct: 2022 GAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAV 2081

Query: 368  SSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
            +  G V+A+G N  GQ G G       P L+    LE      V+CG+ H+ 
Sbjct: 2082 TETGQVFAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSV 2131



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/263 (25%), Positives = 126/263 (47%), Gaps = 32/263 (12%)

Query: 233  TLALSDIGQVWGWGYGGEGQLG--LGSRIRM------VSSPHPIPCI---ESSYGKDRSA 281
            TL+    G ++GWG+   GQLG   G+++++      +++  P+  I   ++ +      
Sbjct: 2756 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADG 2815

Query: 282  AL--------------SRGSVNSEGPGFRVPGNYVKGIAC--GGRHSAVITDAGALLTFG 325
             L                 SV++      +   +++ +A   GG+H   ++  G L ++G
Sbjct: 2816 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGELYSWG 2875

Query: 326  WGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLG 385
                G+ G G+      P  + SL G+++  +AAG  H+ CI++ G++Y +G  ++G+LG
Sbjct: 2876 EAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELYTWGKGRYGRLG 2935

Query: 386  TGGDQAETLPRLLDAPSLENVHSKSVSCGA--RHTAVIADDGKVFCWGWNKYGQLGLGDV 443
             G  + +  P+L++A  L+      V+CG+    T  + DD  V+ WG   YG+LG G  
Sbjct: 2936 HGDSEDQLKPKLVEA--LQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGS 2993

Query: 444  IDRNIPSQV-TIEGCVPRNVACG 465
                +P ++ ++ G     V CG
Sbjct: 2994 DGCKVPMKIDSLTGLGVVKVECG 3016



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 119/274 (43%), Gaps = 44/274 (16%)

Query: 205  DENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDI-------GQVWGWGYGGEGQLG--L 255
            DE+L+  P L + N        A G      LS +        +V+ WG   + QLG   
Sbjct: 1726 DEDLATVPFLASDNEEEEDEKTATGSMSRKRLSGLESAATIRTKVFVWGLNDKDQLGGLK 1785

Query: 256  GSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVI 315
            GS+I++            S+ +  SA                  N V+ +A G +    +
Sbjct: 1786 GSKIKV-----------PSFSETLSAL-----------------NVVQ-VAGGSKSLFAV 1816

Query: 316  TDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVA--AGLWHTICISSDGD 372
            T  G +   G    G+ G G +   +  P  +S+L    ++ VA  +G  H + ++ DG 
Sbjct: 1817 TAEGKVYACGEATNGRLGLGLSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGK 1876

Query: 373  VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGW 432
            V+++G    G+LG         PRL++A  L+    + ++CG+ H+A I   G+++ WG 
Sbjct: 1877 VFSWGEGDDGKLGHFSRMNCDKPRLIEA--LKTKRIRDIACGSSHSAAITSSGELYSWGL 1934

Query: 433  NKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACG 465
             +YG+LG GD   +  P  V +  G     VACG
Sbjct: 1935 GEYGRLGHGDNTTQLRPKLVKVLLGHRVVQVACG 1968



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 82/323 (25%), Positives = 122/323 (37%), Gaps = 67/323 (20%)

Query: 58   MAISDSRKLITWGSTDD--LGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTE 115
            +A+S   +L +WG  +D  LG    +      + E         +V  AAG AH   +T 
Sbjct: 2863 LALSSEGELYSWGEAEDGKLGHGNRSPCDRPRVIESL---RGVEVVDIAAGGAHSACITA 2919

Query: 116  GGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG---- 171
             GE+YTWG       GR +G L  G     D  ++    L E +     +  + G     
Sbjct: 2920 SGELYTWG------KGR-YGRLGHG-----DSEDQLKPKLVEALQGHRVIDVACGSGDAQ 2967

Query: 172  TSSGTDGR-----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATV 226
            T   TD       G G+ G   R              G  +    P  +    G+ +  V
Sbjct: 2968 TLCLTDDDMVWSWGDGDYGKLGR--------------GGSDGCKVPMKIDSLTGLGVVKV 3013

Query: 227  AAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRG 286
              G + ++AL+  G V+ WG G   +LG GS    V  P  +  ++              
Sbjct: 3014 ECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD-DHVRRPRQVQGLQ-------------- 3058

Query: 287  SVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCV 346
                        G  V  IA G  H    T+ G + T+G    GQ G G+T+    P  V
Sbjct: 3059 ------------GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 3106

Query: 347  SSLLGIQIEGVAAGLWHTICISS 369
            ++L G +I  VA G  HT+  S+
Sbjct: 3107 AALQGKKINRVACGSAHTLAWST 3129



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 5/73 (6%)

Query: 53   GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
            G  F++A++ S  + TWG  D   LG     S  H   P          ++  A G  HC
Sbjct: 3016 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRRPRQVQGLQGKKVIAIATGSLHC 3072

Query: 111  VAVTEGGEVYTWG 123
            V  TE GEVYTWG
Sbjct: 3073 VCCTEDGEVYTWG 3085


>gi|297274438|ref|XP_001101212.2| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 3
           [Macaca mulatta]
          Length = 519

 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 118/238 (49%), Gaps = 30/238 (12%)

Query: 220 GVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
           G +IA+++ G G H +  +  G+V+ WG+    QLG G+     ++   +PC  S+    
Sbjct: 97  GKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT-----TNHGLVPCQIST---- 147

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
                             +    V  +ACG  HS V+T  G +  +G+   GQ G GST 
Sbjct: 148 -----------------NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTV 190

Query: 339 DELSPNCVSSLLGIQIE-GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
           ++  P  V+  L  ++   +A G    + +   G+VY +G N  GQLG G    +  P  
Sbjct: 191 NQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTP-- 248

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
               +L+ +  + V+CG  HT V+ D+G+V+ WG N YGQLG G+  +++ P+ VT+E
Sbjct: 249 CRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE 306



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 60/166 (36%), Positives = 97/166 (58%), Gaps = 3/166 (1%)

Query: 309 GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS-LLGIQIEGVAAGLWHTICI 367
           G H  + T  G + T+G   Y Q G G+T+  L P  +S+ L   Q+  VA G +H++ +
Sbjct: 108 GPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVL 167

Query: 368 SSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKV 427
           +SDG+V+A+G N  GQ+G+G    + +PR +    L+N    +++CG      + D G+V
Sbjct: 168 TSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTG-CLQNKVVVTIACGQMCCMAVVDTGEV 226

Query: 428 FCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
           + WG+N  GQLGLG   ++  P +V  ++G   + VACG+ HTL+L
Sbjct: 227 YVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 272



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 70/231 (30%), Positives = 109/231 (47%), Gaps = 30/231 (12%)

Query: 203 SGDENLSAFPCLVTLN-PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +G  N    PC ++ N    ++  VA G  H+L L+  G+V+ WGY   GQ+G GS +  
Sbjct: 133 NGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVN- 191

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
                PIP         R     +  V             V  IACG      + D G +
Sbjct: 192 ----QPIP--------RRVTGCLQNKV-------------VVTIACGQMCCMAVVDTGEV 226

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             +G+   GQ G GS+ ++ +P  V++L GI+++ VA G  HT+ ++ +G VYA+G N +
Sbjct: 227 YVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSY 286

Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           GQLGTG    ++ P  +       +  +  +C + HT A     G V+ WG
Sbjct: 287 GQLGTGNKSNQSYPTPVTVEKDRII--EIAACHSTHTSAAKTQGGHVYMWG 335



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 3/105 (2%)

Query: 370 DGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFC 429
           + +++  G N  G LG G  Q+   PR LD+ S + + S S   G  H  +   +G+VF 
Sbjct: 64  NDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIASLSYGSGP-HIVLATTEGEVFT 122

Query: 430 WGWNKYGQLGLGDVIDRNIPSQVTIEGCVPR--NVACGWWHTLLL 472
           WG N Y QLG G      +P Q++      +   VACG +H+L+L
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVL 167



 Score = 39.7 bits (91), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 55/133 (41%), Gaps = 17/133 (12%)

Query: 14  VFMWGYL-PGALPQRSPILSPLVVRLP--LTVGSAWRDVCGGGCGFAMAISDSRKLITWG 70
           VF WGY   G +   S +  P+  R+   L         CG  C   MA+ D+ ++  WG
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMC--CMAVVDTGEVYVWG 230

Query: 71  STDDLGQSYVTSGKHGEIPEPFPLPTEASI--VKAAAGWAHCVAVTEGGEVYTWGWKECV 128
                G   +  G  G  P P  +     I   + A G+AH + +T+ G+VY WG     
Sbjct: 231 YN---GNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG----- 282

Query: 129 PSGRVFGDLSTGT 141
                +G L TG 
Sbjct: 283 --ANSYGQLGTGN 293


>gi|195586891|ref|XP_002083201.1| GD13608 [Drosophila simulans]
 gi|194195210|gb|EDX08786.1| GD13608 [Drosophila simulans]
          Length = 1058

 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 87/280 (31%), Positives = 123/280 (43%), Gaps = 30/280 (10%)

Query: 219 PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLG---SRIRMVSSPHPIPCIESSY 275
           P   +  V+ G RHTL L+  G+V+  G     QLG      R +++        I+ S 
Sbjct: 38  PDTAVQQVSCGHRHTLFLTATGKVYACGSNDYSQLGHDLPTKRPQLIPELQDYVIIQISC 97

Query: 276 GKDRSAALSR-GSVNS-------------EGPGFRVP-------GNYVKGIACGGRHSAV 314
           G   S ALS  G V S             E    ++P          V  IACG  HS  
Sbjct: 98  GSRHSLALSDWGQVLSWGDNDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLA 157

Query: 315 ITDAGALLTFGWGLYGQCGQGSTDDELSPNC---VSSLLGIQIEGVAAGLWHTICISSDG 371
           +T  G L ++G  +YGQ G  S +D    N    +++LLGI +  +A G  H+  IS  G
Sbjct: 158 LTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSG 217

Query: 372 DVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWG 431
            V+ +G N  GQLG   +     P  L   +L  +  +  +CG   +  + ++G VF  G
Sbjct: 218 AVFGWGRNNCGQLGLNDETNRAYPTQLK--TLRTLGVRFAACGDEFSVFLTNEGGVFTCG 275

Query: 432 WNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
              YGQLG G   +  +P  V  + G     VACG  HTL
Sbjct: 276 AGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTL 315



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/265 (31%), Positives = 121/265 (45%), Gaps = 39/265 (14%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI------PCIESSYG 276
           I  ++ G RH+LALSD GQV  WG    GQLG  +   +V  P  +        ++ + G
Sbjct: 92  IIQISCGSRHSLALSDWGQVLSWGDNDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACG 151

Query: 277 KDRSAALS------------RGSVNSEGPGFRVPGNY-----------VKGIACGGRHSA 313
            + S AL+             G +    P      NY           +  IACGG HS 
Sbjct: 152 NNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSF 211

Query: 314 VITDAGALLTFGWGLYGQCGQGSTDDELS---PNCVSSLLGIQIEGVAAGLWHTICISSD 370
           +I+ +GA+  FGWG    CGQ   +DE +   P  + +L  + +   A G   ++ ++++
Sbjct: 212 LISKSGAV--FGWG-RNNCGQLGLNDETNRAYPTQLKTLRTLGVRFAACGDEFSVFLTNE 268

Query: 371 GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFC 429
           G V+  G   +GQLG G    E LPR++    L       V+CG RHT A +   GKV+ 
Sbjct: 269 GGVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLAFVPSRGKVYA 326

Query: 430 WGWNKYGQLGLGDVIDRNIPSQVTI 454
           +G    GQLG        +P QV I
Sbjct: 327 FGLGSSGQLGTRSTKSLMLP-QVVI 350



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 103/375 (27%), Positives = 162/375 (43%), Gaps = 53/375 (14%)

Query: 30  ILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGE 87
           IL+P   ++P T  +A + V  G     + ++ + K+   GS D   LG    T      
Sbjct: 28  ILTP--RQIPWTPDTAVQQVSCGH-RHTLFLTATGKVYACGSNDYSQLGHDLPTKR---- 80

Query: 88  IPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDV 147
            P+  P   +  I++ + G  H +A+++ G+V +WG  +C       G L  G   +K++
Sbjct: 81  -PQLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDNDC-------GQL--GHATEKEI 130

Query: 148 FERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDEN 207
              Q   +  Q+  ++ V  + G   S       GE  S    I         +S  D  
Sbjct: 131 V--QLPKVVRQLVSKTVVQIACGNNHS-LALTSCGELYSWGSNIY---GQLGVNSPNDLT 184

Query: 208 LSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHP 267
              +P  +T   G+ +A +A GG H+  +S  G V+GWG    GQLGL            
Sbjct: 185 HCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDE--------- 235

Query: 268 IPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWG 327
                     +R+      ++ + G         V+  ACG   S  +T+ G + T G G
Sbjct: 236 ---------TNRAYPTQLKTLRTLG---------VRFAACGDEFSVFLTNEGGVFTCGAG 277

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFGGNQFGQLGT 386
            YGQ G G + +E+ P  V  L+G  I  VA G  HT+  + S G VYAFG    GQLGT
Sbjct: 278 AYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLAFVPSRGKVYAFGLGSSGQLGT 337

Query: 387 GGDQAETLPRLLDAP 401
              ++  LP+++  P
Sbjct: 338 RSTKSLMLPQVVIGP 352



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 80/155 (51%), Gaps = 22/155 (14%)

Query: 329 YGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
           +GQ G G  +DE  L+P  +       ++ V+ G  HT+ +++ G VYA G N + QLG 
Sbjct: 15  HGQLGLGGIEDEQILTPRQIPWTPDTAVQQVSCGHRHTLFLTATGKVYACGSNDYSQLG- 73

Query: 387 GGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG------- 439
             D     P+L+  P L++     +SCG+RH+  ++D G+V  WG N  GQLG       
Sbjct: 74  -HDLPTKRPQLI--PELQDYVIIQISCGSRHSLALSDWGQVLSWGDNDCGQLGHATEKEI 130

Query: 440 --LGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
             L  V+ R + S+  ++      +ACG  H+L L
Sbjct: 131 VQLPKVV-RQLVSKTVVQ------IACGNNHSLAL 158



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 82/330 (24%), Positives = 128/330 (38%), Gaps = 59/330 (17%)

Query: 20  LPGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSY 79
           LP   PQ  P L   V+ + ++ GS            ++A+SD  ++++WG  D     +
Sbjct: 76  LPTKRPQLIPELQDYVI-IQISCGSR----------HSLALSDWGQVLSWGDNDCGQLGH 124

Query: 80  VTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLST 139
            T  +  ++P+        ++V+ A G  H +A+T  GE+Y+WG         ++G L  
Sbjct: 125 ATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWG-------SNIYGQLGV 177

Query: 140 GTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAE 199
            +  D           T    P + +  + GG  S    +     G  R           
Sbjct: 178 NSPNDLTHCNYPLRLTTLLGIPLAAI--ACGGNHSFLISKSGAVFGWGRNNCG------- 228

Query: 200 SSSSGDENLSAFPC-LVTLNP-GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS 257
                DE   A+P  L TL   GVR A  A G   ++ L++ G V+  G G  GQLG G 
Sbjct: 229 QLGLNDETNRAYPTQLKTLRTLGVRFA--ACGDEFSVFLTNEGGVFTCGAGAYGQLGHG- 285

Query: 258 RIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHS-AVIT 316
                SS   +P +                         + G+ +  +ACG RH+ A + 
Sbjct: 286 ----FSSNEMLPRM----------------------VMELMGSTITQVACGNRHTLAFVP 319

Query: 317 DAGALLTFGWGLYGQCGQGSTDDELSPNCV 346
             G +  FG G  GQ G  ST   + P  V
Sbjct: 320 SRGKVYAFGLGSSGQLGTRSTKSLMLPQVV 349



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 1/107 (0%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           ++S  ++Y +G    GQLG GG + E +      P   +   + VSCG RHT  +   GK
Sbjct: 1   MASGKELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVSCGHRHTLFLTATGK 60

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
           V+  G N Y QLG  D+  +       ++  V   ++CG  H+L L+
Sbjct: 61  VYACGSNDYSQLG-HDLPTKRPQLIPELQDYVIIQISCGSRHSLALS 106


>gi|290994544|ref|XP_002679892.1| serine/threonine protein kinase [Naegleria gruberi]
 gi|284093510|gb|EFC47148.1| serine/threonine protein kinase [Naegleria gruberi]
          Length = 1485

 Score =  101 bits (252), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 86/281 (30%), Positives = 128/281 (45%), Gaps = 59/281 (20%)

Query: 215  VTLNP------GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
            +T NP      GV IA V  G  H L   D   ++  G+ G GQLG+G+    V+SP   
Sbjct: 786  ITQNPPYGIPKGVVIANVTCGAYHILVTDDNNNLYAAGFNGNGQLGVGNE---VNSPE-- 840

Query: 269  PCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL 328
                          L + + NS+  G       +   +CG +HS V+T+ GA   FG   
Sbjct: 841  --------------LVKVNWNSQANG------KIFQTSCGAKHSLVLTEKGAF-AFGDNT 879

Query: 329  YGQCGQGSTDDELSPNCVSSLLGIQIE---GVAAGLWHTICISSDGDVYAFGGNQFGQLG 385
            YGQ G    D   SP      + I I+    V AG +H+  ++ +G + AFG N + QLG
Sbjct: 880  YGQLGVSGIDKSSSP------IKIPIDNPVAVYAGFYHSHILTRNGTLLAFGRNDYQQLG 933

Query: 386  T--GGDQAETLPRLLDAP----SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG 439
               GG    T+P  ++ P     + ++ S     GA HT ++   G V+ +G N YGQLG
Sbjct: 934  PLYGGGSIVTIPTAVNFPYAYGGIADIQS-----GAFHTVILTSTGMVYAYGNNDYGQLG 988

Query: 440  LGDVIDRNIPSQVTIEGC--VPR---NVACGWWHTLLLAVP 475
                +D+   S     G    PR   ++A G +H+++L  P
Sbjct: 989  FS--LDKTATSAEFKFGSNNSPRIAISIAAGAFHSVVLTSP 1027



 Score = 41.6 bits (96), Expect = 1.00,   Method: Composition-based stats.
 Identities = 38/144 (26%), Positives = 55/144 (38%), Gaps = 13/144 (9%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
           + CG RH  V+       T G   YGQ G          N V       +  + A  + T
Sbjct: 599 MVCGRRHLVVLMQDNTTYTVGSNYYGQLGLRGVSYSSKLNFVRG----DVSDIEAADFTT 654

Query: 365 ICISSDGDVYAFGGNQFGQLG-TGGDQAETLPRLLDAPS-------LENVHSKSVSCGAR 416
             I++   +YAFG N  GQLG T    + +L    D            +  + S+S GA 
Sbjct: 655 FLIANQSKLYAFGMNNMGQLGVTSASSSRSLRYTTDLAQDAFAVVDFGSSMNYSISTGAY 714

Query: 417 HTAVIADDGKVFCWGWNKYGQLGL 440
            T + + +G  F  G N     G+
Sbjct: 715 QTFIASLNG-TFVSGLNYNNMFGI 737


>gi|348682416|gb|EGZ22232.1| hypothetical protein PHYSODRAFT_330063 [Phytophthora sojae]
          Length = 2101

 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 84/291 (28%), Positives = 130/291 (44%), Gaps = 44/291 (15%)

Query: 195  KQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG 254
            + TAE++S     +++FP      P  R+  +A G RHT  ++D   ++ +G+G  G+LG
Sbjct: 1724 RPTAENASPI--RMASFP-----RPLRRVVQIACGYRHTALITDDRHLYTFGHGECGRLG 1776

Query: 255  LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAV 314
             G++                  +D +  +S G   S      V    V  ++CG  H+  
Sbjct: 1777 HGNQ------------------EDCTEPVSVGYFTSLIEAEGVDVGGVVEVSCGREHTMA 1818

Query: 315  ITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVY 374
            +T +G L  FGWG  G+ G G T   L P  V+ L  I    VA G  HT+ ++  G V+
Sbjct: 1819 VTASGDLFGFGWGEAGRLGTGETGSSLYPTRVTDLQNIA--AVACGREHTLALTRKGRVF 1876

Query: 375  AFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNK 434
            AFG    G+LG G +  E LP       LE+    ++  G  H+  ++ +G V  WG+  
Sbjct: 1877 AFGAGFGGRLGNGSETDEELP--FAVQGLEDYRIAAIDAGECHSCALSTEGDVLTWGFGS 1934

Query: 435  YGQLGLGDVIDRNIPSQV---------------TIEGCVPRNVACGWWHTL 470
             G LG GD  +   P ++                 E  V   +ACG +HTL
Sbjct: 1935 SGALGHGDRDNCLEPRRIEGPWTGNAIDGEENQASETSVVSAIACGSYHTL 1985



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 109/415 (26%), Positives = 166/415 (40%), Gaps = 92/415 (22%)

Query: 92   FPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQ 151
            FP P    +V+ A G+ H   +T+   +YT+G  EC   GR+      G G  +D  E  
Sbjct: 1738 FPRPLR-RVVQIACGYRHTALITDDRHLYTFGHGEC---GRL------GHGNQEDCTEPV 1787

Query: 152  SS-FLTEQVSPRSQVSRSSGGTSSGTD------------GRGSGEEGSKRRRISLAKQTA 198
            S  + T  +             S G +            G G GE G    R+       
Sbjct: 1788 SVGYFTSLIEAEGVDVGGVVEVSCGREHTMAVTASGDLFGFGWGEAG----RL------- 1836

Query: 199  ESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR 258
                +G+   S +P  VT      IA VA G  HTLAL+  G+V+ +G G  G+LG GS 
Sbjct: 1837 ---GTGETGSSLYPTRVT--DLQNIAAVACGREHTLALTRKGRVFAFGAGFGGRLGNGS- 1890

Query: 259  IRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPG--NY-VKGIACGGRHSAVI 315
                                          + E P F V G  +Y +  I  G  HS  +
Sbjct: 1891 ----------------------------ETDEELP-FAVQGLEDYRIAAIDAGECHSCAL 1921

Query: 316  TDAGALLTFGWGLYGQCGQGSTDDELSPNCV------SSLLGIQ--------IEGVAAGL 361
            +  G +LT+G+G  G  G G  D+ L P  +      +++ G +        +  +A G 
Sbjct: 1922 STEGDVLTWGFGSSGALGHGDRDNCLEPRRIEGPWTGNAIDGEENQASETSVVSAIACGS 1981

Query: 362  WHTICISSDGDVYAFGGNQFGQLG----TGGDQAETLPRLLDAPSLENVHSKSVSCGARH 417
            +HT+  +SDG +Y +G    GQL     T  +     P+ +  P+  N   +SV+CG   
Sbjct: 1982 YHTLAATSDGALYGWGDAAAGQLSVEYITAPEMVVLTPQRIRVPT--NSGIRSVACGTFT 2039

Query: 418  TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
            +AV  + G +F WG    G     +V D  +     +       VACG +H + +
Sbjct: 2040 SAVCTNQGHLFLWGSPAAGNGAPLEVDDARVKRIGVLGEFEFSQVACGAYHAVAI 2094



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 58/147 (39%), Gaps = 26/147 (17%)

Query: 223  IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
            ++ +A G  HTLA +  G ++GWG    GQL     +  +++P  +              
Sbjct: 1974 VSAIACGSYHTLAATSDGALYGWGDAAAGQLS----VEYITAPEMVVLTPQR-------- 2021

Query: 283  LSRGSVNSEGPGFRVPGNY-VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL 341
                         RVP N  ++ +ACG   SAV T+ G L  +G    G       DD  
Sbjct: 2022 ------------IRVPTNSGIRSVACGTFTSAVCTNQGHLFLWGSPAAGNGAPLEVDDAR 2069

Query: 342  SPNCVSSLLGIQIEGVAAGLWHTICIS 368
                +  L   +   VA G +H + I+
Sbjct: 2070 VKR-IGVLGEFEFSQVACGAYHAVAIT 2095


>gi|301755552|ref|XP_002913643.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
           [Ailuropoda melanoleuca]
          Length = 1129

 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 138/308 (44%), Gaps = 51/308 (16%)

Query: 84  KHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGL 143
           + G  PE      +  IV  A G +H +A+++ G++++WG           G L   T  
Sbjct: 149 REGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWG-------AGSDGQLGLMTTE 201

Query: 144 DKDVFERQSSFLTEQVSPRSQVSRSSGG---TSSGTDGRGSGEEGSKRRRISLAKQTAES 200
           D     R    L ++++ ++ +  S G     +   DG+      +   ++ L K+    
Sbjct: 202 DSVAVPR----LIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 257

Query: 201 SSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR 260
           +S         P  V    G+ +A VAAGG H+ ALS  G V+GWG    GQLGL     
Sbjct: 258 AS---------PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE-- 306

Query: 261 MVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA 320
                           +DR +      + ++          V  I+CG  H+AV+T +G 
Sbjct: 307 ----------------EDRESPCHVKLLRTQK---------VVYISCGEEHTAVLTKSGG 341

Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFGGN 379
           + TFG G  GQ G  S +DE++P  V  L+G ++  +A G  HT+  + S G +YAFG  
Sbjct: 342 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 401

Query: 380 QFGQLGTG 387
             GQLGTG
Sbjct: 402 ARGQLGTG 409



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 118/255 (46%), Gaps = 38/255 (14%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  VA GG H++ L + G+V+  G   +GQLG     R  + P  I  +           
Sbjct: 115 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG---HEREGNKPEQIGALAD--------- 162

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                             ++  +ACG  HS  ++D G L ++G G  GQ G  +T+D ++
Sbjct: 163 -----------------QHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA 205

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD-QAETLPRLLDA 400
            P  +  L    I  V+ G WH + +++DG  + +G N  GQLG G +  ++  P+    
Sbjct: 206 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQ--RV 263

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI---EGC 457
            SLE +    V+ G  H+  ++  G VF WG N  GQLGL D  DR  P  V +   +  
Sbjct: 264 RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKV 323

Query: 458 VPRNVACGWWHTLLL 472
           V   ++CG  HT +L
Sbjct: 324 V--YISCGEEHTAVL 336



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 80/261 (30%), Positives = 114/261 (43%), Gaps = 34/261 (13%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES-------- 273
            I  VA G  H+LALSD GQ++ WG G +GQLGL +    V+ P  I  +          
Sbjct: 164 HIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSC 223

Query: 274 ---------------SYGKDRSAALSRGS-VNSEGPGFRV---PGNYVKGIACGGRHSAV 314
                          ++GK+    L  G    S+    RV    G  +  +A GG HS  
Sbjct: 224 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFA 283

Query: 315 ITDAGALLTFGWGLY--GQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGD 372
           ++ +GA+  FGWG+   GQ G    +D  SP  V  L   ++  ++ G  HT  ++  G 
Sbjct: 284 LSLSGAV--FGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 341

Query: 373 VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           V+ FG    GQLG      E  PR      L       ++CG +HT A +   G ++ +G
Sbjct: 342 VFTFGAGSCGQLGHDSMNDEVNPR--RVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 399

Query: 432 WNKYGQLGLGDVIDRNIPSQV 452
               GQLG G   +   PS V
Sbjct: 400 CGARGQLGTGHTCNVKCPSPV 420



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 92/369 (24%), Positives = 144/369 (39%), Gaps = 79/369 (21%)

Query: 39  PLTVGS-AWRDVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLP 95
           P  +G+ A + +    CG   ++A+SD  +L +WG+  D     +T+     +P      
Sbjct: 154 PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 213

Query: 96  TEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFL 155
            + +I++ + G  HC+A+   G+ +TWG           G L    GL K+         
Sbjct: 214 NQQTILQVSCGNWHCLALAADGQFFTWG-------KNSHGQL----GLGKE--------F 254

Query: 156 TEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLA-------KQTAESSSSGDENL 208
             Q SP  Q  RS  G        G    G+    +SL+          A      DE  
Sbjct: 255 PSQASP--QRVRSLEGIPLAQVAAG----GAHSFALSLSGAVFGWGMNNAGQLGLSDEED 308

Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
              PC V L    ++  ++ G  HT  L+  G V+ +G G  GQLG  S   M    +P 
Sbjct: 309 RESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDS---MNDEVNPR 365

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHS-AVITDAGALLTFGWG 327
             +E                        + G+ V  IACG +H+ A +  +G +  FG G
Sbjct: 366 RVLE------------------------LMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 401

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLG 385
             GQ G G T +   P+ V             G W  H+  +S+  D + +  +   Q+ 
Sbjct: 402 ARGQLGTGHTCNVKCPSPVK------------GYWAAHSGQLSARADRFKY--HIVKQIF 447

Query: 386 TGGDQAETL 394
           +GGDQ   L
Sbjct: 448 SGGDQTFVL 456



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 62/124 (50%), Gaps = 10/124 (8%)

Query: 354 IEGVAAGLWHTICISSDGDVYAFGGNQFGQLG--TGGDQAETLPRLLDAPSLENVHSKSV 411
           ++ VA G  H++ +  DG+VY  G N  GQLG    G++ E +  L D       H   V
Sbjct: 115 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQIGALADQ------HIVHV 168

Query: 412 SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR-NIPSQV-TIEGCVPRNVACGWWHT 469
           +CG  H+  ++D G++F WG    GQLGL    D   +P  +  +       V+CG WH 
Sbjct: 169 ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 228

Query: 470 LLLA 473
           L LA
Sbjct: 229 LALA 232


>gi|402901986|ref|XP_003913912.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Papio anubis]
          Length = 551

 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 124/253 (49%), Gaps = 31/253 (12%)

Query: 220 GVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
           G +IA+++ G G H +  +  G+V+ WG+    QLG G+     ++   +PC  S+    
Sbjct: 97  GKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT-----TNHGLVPCQIST---- 147

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
                             +    V  +ACG  HS V+T  G +  +G+   GQ G GST 
Sbjct: 148 -----------------NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTV 190

Query: 339 DELSPNCVSSLLGIQIE-GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
           ++  P  V+  L  ++   +A G    + +   G+VY +G N  GQLG G    +  P  
Sbjct: 191 NQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCR 250

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE-G 456
           + A  L+ +  + V+CG  HT V+ D+G+V+ WG N YGQLG G+  +++ P+ VT+E  
Sbjct: 251 VAA--LQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKD 308

Query: 457 CVPRNVACGWWHT 469
            +    AC   HT
Sbjct: 309 RIIEIAACHSTHT 321



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 60/166 (36%), Positives = 97/166 (58%), Gaps = 3/166 (1%)

Query: 309 GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS-LLGIQIEGVAAGLWHTICI 367
           G H  + T  G + T+G   Y Q G G+T+  L P  +S+ L   Q+  VA G +H++ +
Sbjct: 108 GPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVL 167

Query: 368 SSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKV 427
           +SDG+V+A+G N  GQ+G+G    + +PR +    L+N    +++CG      + D G+V
Sbjct: 168 TSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTG-CLQNKVVVTIACGQMCCMAVVDTGEV 226

Query: 428 FCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
           + WG+N  GQLGLG   ++  P +V  ++G   + VACG+ HTL+L
Sbjct: 227 YVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 272



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 70/231 (30%), Positives = 109/231 (47%), Gaps = 30/231 (12%)

Query: 203 SGDENLSAFPCLVTLN-PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +G  N    PC ++ N    ++  VA G  H+L L+  G+V+ WGY   GQ+G GS +  
Sbjct: 133 NGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVN- 191

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
                PIP         R     +  V             V  IACG      + D G +
Sbjct: 192 ----QPIP--------RRVTGCLQNKV-------------VVTIACGQMCCMAVVDTGEV 226

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             +G+   GQ G GS+ ++ +P  V++L GI+++ VA G  HT+ ++ +G VYA+G N +
Sbjct: 227 YVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSY 286

Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           GQLGTG    ++ P  +       +  +  +C + HT A     G V+ WG
Sbjct: 287 GQLGTGNKSNQSYPTPVTVEKDRII--EIAACHSTHTSAAKTQGGHVYMWG 335



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 3/105 (2%)

Query: 370 DGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFC 429
           + +++  G N  G LG G  Q+   PR LD+ S + + S S   G  H  +   +G+VF 
Sbjct: 64  NDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIASLSYGSGP-HIVLATTEGEVFT 122

Query: 430 WGWNKYGQLGLGDVIDRNIPSQVTIEGCVPR--NVACGWWHTLLL 472
           WG N Y QLG G      +P Q++      +   VACG +H+L+L
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVL 167



 Score = 39.3 bits (90), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 55/133 (41%), Gaps = 17/133 (12%)

Query: 14  VFMWGYL-PGALPQRSPILSPLVVRLP--LTVGSAWRDVCGGGCGFAMAISDSRKLITWG 70
           VF WGY   G +   S +  P+  R+   L         CG  C   MA+ D+ ++  WG
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMC--CMAVVDTGEVYVWG 230

Query: 71  STDDLGQSYVTSGKHGEIPEPFPLPTEASI--VKAAAGWAHCVAVTEGGEVYTWGWKECV 128
                G   +  G  G  P P  +     I   + A G+AH + +T+ G+VY WG     
Sbjct: 231 YN---GNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG----- 282

Query: 129 PSGRVFGDLSTGT 141
                +G L TG 
Sbjct: 283 --ANSYGQLGTGN 293


>gi|344284757|ref|XP_003414131.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Loxodonta
           africana]
          Length = 1050

 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 112/251 (44%), Gaps = 30/251 (11%)

Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
            I  VA G  H+LALSD GQ++ WG G +GQLGL +    V+ P  I             
Sbjct: 85  HIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ------------ 132

Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDE 340
                         ++    +  ++CG  H   +   G   T+G   +GQ G G     +
Sbjct: 133 --------------KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
            SP  V SL GI +  V AG  H+  +S  G V+ +G N  GQLG   ++    P  +  
Sbjct: 179 ASPQRVRSLEGIPLAQVTAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKL 238

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVP 459
              + V    +SCG  HTAV+  +G VF +G    GQLG   + D   P +V  + G   
Sbjct: 239 LRTQKV--VYISCGEEHTAVLTKNGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEV 296

Query: 460 RNVACGWWHTL 470
             +ACG  HTL
Sbjct: 297 TQIACGRQHTL 307



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 138/308 (44%), Gaps = 51/308 (16%)

Query: 84  KHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGL 143
           + G  PE      +  IV  A G +H +A+++ G++++WG      +G   G L   T  
Sbjct: 70  REGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWG------AGSD-GQLGLMTTE 122

Query: 144 DKDVFERQSSFLTEQVSPRSQVSRSSGG---TSSGTDGRGSGEEGSKRRRISLAKQTAES 200
           D     R    L ++++ ++ +  S G     +   DG+      +   ++ L K+    
Sbjct: 123 DSVAVPR----LIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 201 SSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR 260
           +S         P  V    G+ +A V AGG H+ ALS  G V+GWG    GQLGL     
Sbjct: 179 AS---------PQRVRSLEGIPLAQVTAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE-- 227

Query: 261 MVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA 320
                           KDR +      + ++          V  I+CG  H+AV+T  G 
Sbjct: 228 ----------------KDRESPCHVKLLRTQK---------VVYISCGEEHTAVLTKNGG 262

Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFGGN 379
           + TFG G  GQ G  S +DE++P  V  L+G ++  +A G  HT+  + S G +YAFG  
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 380 QFGQLGTG 387
             GQLGTG
Sbjct: 323 ARGQLGTG 330



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 118/255 (46%), Gaps = 38/255 (14%)

Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
           +  VA GG H++ L + G+V+  G   +GQLG     R  + P  I  +   +       
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG---HEREGNKPEQIGALADQH------- 85

Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
                              +  +ACG  HS  ++D G L ++G G  GQ G  +T+D ++
Sbjct: 86  -------------------IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA 126

Query: 343 -PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD-QAETLPRLLDA 400
            P  +  L    I  V+ G WH + +++DG  + +G N  GQLG G +  ++  P+    
Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQ--RV 184

Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI---EGC 457
            SLE +    V+ G  H+  ++  G VF WG N  GQLGL D  DR  P  V +   +  
Sbjct: 185 RSLEGIPLAQVTAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKV 244

Query: 458 VPRNVACGWWHTLLL 472
           V   ++CG  HT +L
Sbjct: 245 V--YISCGEEHTAVL 257



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 92/369 (24%), Positives = 144/369 (39%), Gaps = 79/369 (21%)

Query: 39  PLTVGS-AWRDVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLP 95
           P  +G+ A + +    CG   ++A+SD  +L +WG+  D     +T+     +P      
Sbjct: 75  PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 96  TEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFL 155
            + +I++ + G  HC+A+   G+ +TWG           G L    GL K+         
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWG-------KNSHGQL----GLGKE--------F 175

Query: 156 TEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLA-------KQTAESSSSGDENL 208
             Q SP  Q  RS  G        G    G+    +SL+          A      DE  
Sbjct: 176 PSQASP--QRVRSLEGIPLAQVTAG----GAHSFALSLSGAVFGWGMNNAGQLGLSDEKD 229

Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
              PC V L    ++  ++ G  HT  L+  G V+ +G G  GQLG  S   M    +P 
Sbjct: 230 RESPCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGSCGQLGHDS---MNDEVNPR 286

Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHS-AVITDAGALLTFGWG 327
             +E                        + G+ V  IACG +H+ A +  +G +  FG G
Sbjct: 287 RVLE------------------------LMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLG 385
             GQ G G T +   P+ V             G W  H+  +S+  D + +  +   Q+ 
Sbjct: 323 ARGQLGTGHTCNVKCPSPVK------------GYWAAHSGQLSARADRFKY--HIVKQIF 368

Query: 386 TGGDQAETL 394
           +GGDQ   L
Sbjct: 369 SGGDQTFVL 377



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 62/124 (50%), Gaps = 10/124 (8%)

Query: 354 IEGVAAGLWHTICISSDGDVYAFGGNQFGQLG--TGGDQAETLPRLLDAPSLENVHSKSV 411
           ++ VA G  H++ +  DG+VY  G N  GQLG    G++ E +  L D       H   V
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQIGALADQ------HIVHV 89

Query: 412 SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR-NIPSQV-TIEGCVPRNVACGWWHT 469
           +CG  H+  ++D G++F WG    GQLGL    D   +P  +  +       V+CG WH 
Sbjct: 90  ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149

Query: 470 LLLA 473
           L LA
Sbjct: 150 LALA 153


>gi|21711763|gb|AAM75072.1| RE53774p [Drosophila melanogaster]
          Length = 1058

 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 85/276 (30%), Positives = 125/276 (45%), Gaps = 39/276 (14%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI--- 268
           P L+       I  +  G RH+LALSD GQV  WG    GQLG  +   +V  P  +   
Sbjct: 81  PLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQL 140

Query: 269 ---PCIESSYGKDRSAALS------------RGSVNSEGPGFRVPGNY-----------V 302
                ++ + G + S AL+             G +    P      NY           +
Sbjct: 141 VTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPL 200

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS---PNCVSSLLGIQIEGVAA 359
             IACGG HS +I+ +GA+  FGWG    CGQ   +DE +   P  + +L  + +  VA 
Sbjct: 201 AAIACGGNHSFLISKSGAV--FGWG-RNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVAC 257

Query: 360 GLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT- 418
           G   ++ ++++G V+  G   +GQLG G    E LPR++    L       V+CG RHT 
Sbjct: 258 GDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTL 315

Query: 419 AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI 454
           A++   G+V+ +G    GQLG        +P QV I
Sbjct: 316 ALVPSRGRVYAFGLGSSGQLGTRSTKSLMLP-QVVI 350



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 104/375 (27%), Positives = 161/375 (42%), Gaps = 53/375 (14%)

Query: 30  ILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIP 89
           IL+P   ++P T  +A + V  G     + ++ + K+   GS D     Y   G      
Sbjct: 28  ILTP--SQIPWTPDTAVQQVACGH-RHTLFLTATGKVYACGSND-----YSQLGHDLPTK 79

Query: 90  EPFPLP--TEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDV 147
            P  +P   +  I++   G  H +A+++ G+V +WG  +C       G L  G   DK++
Sbjct: 80  RPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDC-------GQL--GHATDKEI 130

Query: 148 FERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDEN 207
              Q   +  Q+  ++ V  + G   S       GE  S    I         +S  D  
Sbjct: 131 V--QLPKVVRQLVTKTVVQIACGNNHSLA-LTSCGELYSWGSNIY---GQLGVNSPNDLT 184

Query: 208 LSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHP 267
              +P  +T   G+ +A +A GG H+  +S  G V+GWG    GQLGL            
Sbjct: 185 HCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDE--------- 235

Query: 268 IPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWG 327
                     +RS      ++ + G         V+ +ACG   S  +T+ G + T G G
Sbjct: 236 ---------TNRSYPTQLKTLRTLG---------VRFVACGDEFSVFLTNEGGVFTCGAG 277

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFGGNQFGQLGT 386
            YGQ G G + +E+ P  V  L+G  I  VA G  HT+  + S G VYAFG    GQLGT
Sbjct: 278 AYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGT 337

Query: 387 GGDQAETLPRLLDAP 401
              ++  LP+++  P
Sbjct: 338 RSTKSLMLPQVVIGP 352



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 109/279 (39%), Gaps = 80/279 (28%)

Query: 241 QVWGWGYGGEGQLGLG-SRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPG 299
           +++ WG    GQLGLG      + +P  IP                            P 
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPW--------------------------TPD 39

Query: 300 NYVKGIACGGRHSAVITDAGALLTFGWGLYGQ---------------------------- 331
             V+ +ACG RH+  +T  G +   G   Y Q                            
Sbjct: 40  TAVQQVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTKRPLLIPELQDYVIIQICCGS 99

Query: 332 -------------------CGQ--GSTDDELS--PNCVSSLLGIQIEGVAAGLWHTICIS 368
                              CGQ   +TD E+   P  V  L+   +  +A G  H++ ++
Sbjct: 100 RHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALT 159

Query: 369 SDGDVYAFGGNQFGQLGTGGDQAETLPRL-LDAPSLENVHSKSVSCGARHTAVIADDGKV 427
           S G++Y++G N +GQLG       T     L   +L  +   +++CG  H+ +I+  G V
Sbjct: 160 SCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAV 219

Query: 428 FCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
           F WG N  GQLGL D  +R+ P+Q+ T+     R VACG
Sbjct: 220 FGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACG 258



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 77/152 (50%), Gaps = 16/152 (10%)

Query: 329 YGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
           +GQ G G  +DE  L+P+ +       ++ VA G  HT+ +++ G VYA G N + QLG 
Sbjct: 15  HGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSNDYSQLG- 73

Query: 387 GGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR 446
             D     P L+  P L++     + CG+RH+  ++D G+V  WG N  GQ  LG   D+
Sbjct: 74  -HDLPTKRPLLI--PELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQ--LGHATDK 128

Query: 447 NIPS------QVTIEGCVPRNVACGWWHTLLL 472
            I        Q+  +  V   +ACG  H+L L
Sbjct: 129 EIVQLPKVVRQLVTKTVV--QIACGNNHSLAL 158



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 77/324 (23%), Positives = 126/324 (38%), Gaps = 51/324 (15%)

Query: 24  LPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSG 83
           LP + P+L P +    +        +C G    ++A+SD  ++++WG  D     + T  
Sbjct: 76  LPTKRPLLIPELQDYVII------QICCGS-RHSLALSDWGQVLSWGDNDCGQLGHATDK 128

Query: 84  KHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGL 143
           +  ++P+        ++V+ A G  H +A+T  GE+Y+WG         ++G L   +  
Sbjct: 129 EIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWG-------SNIYGQLGVNSPN 181

Query: 144 DKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSS 203
           D           T    P + +  + GG  S    +     G  R          E++ S
Sbjct: 182 DLTHCNYPLRLTTLLGIPLAAI--ACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRS 239

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
               L     L     GVR   VA G   ++ L++ G V+  G G  GQLG G      S
Sbjct: 240 YPTQLKTLRTL-----GVRF--VACGDEFSVFLTNEGGVFTCGAGAYGQLGHG-----FS 287

Query: 264 SPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHS-AVITDAGALL 322
           S   +P +                         + G+ +  +ACG RH+ A++   G + 
Sbjct: 288 SNEMLPRM----------------------VMELMGSTITQVACGNRHTLALVPSRGRVY 325

Query: 323 TFGWGLYGQCGQGSTDDELSPNCV 346
            FG G  GQ G  ST   + P  V
Sbjct: 326 AFGLGSSGQLGTRSTKSLMLPQVV 349



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 11/112 (9%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           ++S  ++Y +G    GQLG GG + E +      P   +   + V+CG RHT  +   GK
Sbjct: 1   MASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGK 60

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQV-----TIEGCVPRNVACGWWHTLLLA 473
           V+  G N Y QLG       ++P++       ++  V   + CG  H+L L+
Sbjct: 61  VYACGSNDYSQLG------HDLPTKRPLLIPELQDYVIIQICCGSRHSLALS 106


>gi|24655113|ref|NP_728591.1| CG9153, isoform A [Drosophila melanogaster]
 gi|24655115|ref|NP_612098.2| CG9153, isoform B [Drosophila melanogaster]
 gi|23092754|gb|AAF47474.2| CG9153, isoform A [Drosophila melanogaster]
 gi|23092755|gb|AAF47475.2| CG9153, isoform B [Drosophila melanogaster]
          Length = 1058

 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 85/276 (30%), Positives = 125/276 (45%), Gaps = 39/276 (14%)

Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI--- 268
           P L+       I  +  G RH+LALSD GQV  WG    GQLG  +   +V  P  +   
Sbjct: 81  PLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQL 140

Query: 269 ---PCIESSYGKDRSAALS------------RGSVNSEGPGFRVPGNY-----------V 302
                ++ + G + S AL+             G +    P      NY           +
Sbjct: 141 VTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPL 200

Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS---PNCVSSLLGIQIEGVAA 359
             IACGG HS +I+ +GA+  FGWG    CGQ   +DE +   P  + +L  + +  VA 
Sbjct: 201 AAIACGGNHSFLISKSGAV--FGWG-RNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVAC 257

Query: 360 GLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT- 418
           G   ++ ++++G V+  G   +GQLG G    E LPR++    L       V+CG RHT 
Sbjct: 258 GDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTL 315

Query: 419 AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI 454
           A++   G+V+ +G    GQLG        +P QV I
Sbjct: 316 ALVPSRGRVYAFGLGSSGQLGTRSTKSLMLP-QVVI 350



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 104/375 (27%), Positives = 161/375 (42%), Gaps = 53/375 (14%)

Query: 30  ILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIP 89
           IL+P   ++P T  +A + V  G     + ++ + K+   GS D     Y   G      
Sbjct: 28  ILTP--SQIPWTPDTAVQQVACGH-RHTLFLTATGKVYACGSND-----YSQLGHDLPTK 79

Query: 90  EPFPLP--TEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDV 147
            P  +P   +  I++   G  H +A+++ G+V +WG  +C       G L  G   DK++
Sbjct: 80  RPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDC-------GQL--GHATDKEI 130

Query: 148 FERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDEN 207
              Q   +  Q+  ++ V  + G   S       GE  S    I         +S  D  
Sbjct: 131 V--QLPKVVRQLVTKTVVQIACGNNHSLA-LTSCGELYSWGSNIY---GQLGVNSPNDLT 184

Query: 208 LSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHP 267
              +P  +T   G+ +A +A GG H+  +S  G V+GWG    GQLGL            
Sbjct: 185 HCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDE--------- 235

Query: 268 IPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWG 327
                     +RS      ++ + G         V+ +ACG   S  +T+ G + T G G
Sbjct: 236 ---------TNRSYPTQLKTLRTLG---------VRFVACGDEFSVFLTNEGGVFTCGAG 277

Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFGGNQFGQLGT 386
            YGQ G G + +E+ P  V  L+G  I  VA G  HT+  + S G VYAFG    GQLGT
Sbjct: 278 AYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGT 337

Query: 387 GGDQAETLPRLLDAP 401
              ++  LP+++  P
Sbjct: 338 RSTKSLMLPQVVIGP 352



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 109/279 (39%), Gaps = 80/279 (28%)

Query: 241 QVWGWGYGGEGQLGLG-SRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPG 299
           +++ WG    GQLGLG      + +P  IP                            P 
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPW--------------------------TPD 39

Query: 300 NYVKGIACGGRHSAVITDAGALLTFGWGLYGQ---------------------------- 331
             V+ +ACG RH+  +T  G +   G   Y Q                            
Sbjct: 40  TAVQQVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTKRPLLIPELQDYVIIQICCGS 99

Query: 332 -------------------CGQ--GSTDDELS--PNCVSSLLGIQIEGVAAGLWHTICIS 368
                              CGQ   +TD E+   P  V  L+   +  +A G  H++ ++
Sbjct: 100 RHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALT 159

Query: 369 SDGDVYAFGGNQFGQLGTGGDQAETLPRL-LDAPSLENVHSKSVSCGARHTAVIADDGKV 427
           S G++Y++G N +GQLG       T     L   +L  +   +++CG  H+ +I+  G V
Sbjct: 160 SCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAV 219

Query: 428 FCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
           F WG N  GQLGL D  +R+ P+Q+ T+     R VACG
Sbjct: 220 FGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACG 258



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 77/152 (50%), Gaps = 16/152 (10%)

Query: 329 YGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
           +GQ G G  +DE  L+P+ +       ++ VA G  HT+ +++ G VYA G N + QLG 
Sbjct: 15  HGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSNDYSQLG- 73

Query: 387 GGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR 446
             D     P L+  P L++     + CG+RH+  ++D G+V  WG N  GQ  LG   D+
Sbjct: 74  -HDLPTKRPLLI--PELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQ--LGHATDK 128

Query: 447 NIPS------QVTIEGCVPRNVACGWWHTLLL 472
            I        Q+  +  V   +ACG  H+L L
Sbjct: 129 EIVQLPKVVRQLVTKTVV--QIACGNNHSLAL 158



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 77/324 (23%), Positives = 126/324 (38%), Gaps = 51/324 (15%)

Query: 24  LPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSG 83
           LP + P+L P +    +        +C G    ++A+SD  ++++WG  D     + T  
Sbjct: 76  LPTKRPLLIPELQDYVII------QICCGS-RHSLALSDWGQVLSWGDNDCGQLGHATDK 128

Query: 84  KHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGL 143
           +  ++P+        ++V+ A G  H +A+T  GE+Y+WG         ++G L   +  
Sbjct: 129 EIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWG-------SNIYGQLGVNSPN 181

Query: 144 DKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSS 203
           D           T    P + +  + GG  S    +     G  R          E++ S
Sbjct: 182 DLTHCNYPLRLTTLLGIPLAAI--ACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRS 239

Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
               L     L     GVR   VA G   ++ L++ G V+  G G  GQLG G      S
Sbjct: 240 YPTQLKTLRTL-----GVRF--VACGDEFSVFLTNEGGVFTCGAGAYGQLGHG-----FS 287

Query: 264 SPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHS-AVITDAGALL 322
           S   +P +                         + G+ +  +ACG RH+ A++   G + 
Sbjct: 288 SNEMLPRM----------------------VMELMGSTITQVACGNRHTLALVPSRGRVY 325

Query: 323 TFGWGLYGQCGQGSTDDELSPNCV 346
            FG G  GQ G  ST   + P  V
Sbjct: 326 AFGLGSSGQLGTRSTKSLMLPQVV 349



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 11/112 (9%)

Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
           ++S  ++Y +G    GQLG GG + E +      P   +   + V+CG RHT  +   GK
Sbjct: 1   MASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGK 60

Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQV-----TIEGCVPRNVACGWWHTLLLA 473
           V+  G N Y QLG       ++P++       ++  V   + CG  H+L L+
Sbjct: 61  VYACGSNDYSQLG------HDLPTKRPLLIPELQDYVIIQICCGSRHSLALS 106


>gi|328712024|ref|XP_001948029.2| PREDICTED: hypothetical protein LOC100158844 [Acyrthosiphon pisum]
          Length = 1626

 Score =  101 bits (251), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 105/390 (26%), Positives = 156/390 (40%), Gaps = 93/390 (23%)

Query: 104  AAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLT----EQV 159
             AGWAH   +    ++YTWG          +G L  G  + K       S+      E +
Sbjct: 801  GAGWAHAAHI-RNHKLYTWGHSS-------YGCLGVGPHMTKTATPNPVSWFVYIRVEVI 852

Query: 160  SPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
                  + S   T++G    GS   G                 +G    + +P LV    
Sbjct: 853  QVACGRNHSIALTTNGVYSWGSNHYGQL--------------GTGRRGQAPYPMLVDSLS 898

Query: 220  GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIE-----SS 274
               I +V+AG  H+LA+S  GQ+W WG+G  GQLG G+ I     P  +  +E     S+
Sbjct: 899  NELIVSVSAGQYHSLAISASGQLWTWGWGVYGQLGHGA-IDDCEKPKLLKSLENENIISA 957

Query: 275  YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
            YG                               G  HS ++T  G + TFG G +GQ G 
Sbjct: 958  YG-------------------------------GYSHSIILTSNGKVFTFGSGSFGQLGN 986

Query: 335  GSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN----QF--------- 381
            GST    SP  V  L    I+ +    +H + +S  G +Y +G +    +F         
Sbjct: 987  GSTTKITSPVPVYGLPE-PIKCIYTAYFHNLALSDVGRLYTWGSSPQVLRFHAQSQKRAR 1045

Query: 382  GQL----GTGGDQAETLPRLLD------APSLENVHSKS-----VSCGARHTAVIADDGK 426
             QL    G   D AE      D      +P+L +    S     + CG  H+AVI+  G+
Sbjct: 1046 NQLVLNEGDQADDAEIDALTADDGLLHLSPTLVDTSHISGDIFQMCCGCHHSAVISTTGQ 1105

Query: 427  VFCWGWNKYGQLGLGDVIDRNIPSQVTIEG 456
            ++ WG N  GQLG+  + +R +P+ VT+ G
Sbjct: 1106 LYTWGLNLDGQLGVSGIRERLVPT-VTLVG 1134



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 66/236 (27%), Positives = 107/236 (45%), Gaps = 33/236 (13%)

Query: 224  ATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP--------CIESSY 275
            +++ AG  H   + +  +++ WG+   G LG+G  +   ++P+P+          I+ + 
Sbjct: 798  SSLGAGWAHAAHIRN-HKLYTWGHSSYGCLGVGPHMTKTATPNPVSWFVYIRVEVIQVAC 856

Query: 276  GKDRSAALSRGSVNSEGP--------GFRVPGNY-----------VKGIACGGRHSAVIT 316
            G++ S AL+   V S G         G R    Y           +  ++ G  HS  I+
Sbjct: 857  GRNHSIALTTNGVYSWGSNHYGQLGTGRRGQAPYPMLVDSLSNELIVSVSAGQYHSLAIS 916

Query: 317  DAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAF 376
             +G L T+GWG+YGQ G G+ DD   P  + SL    I     G  H+I ++S+G V+ F
Sbjct: 917  ASGQLWTWGWGVYGQLGHGAIDDCEKPKLLKSLENENIISAYGGYSHSIILTSNGKVFTF 976

Query: 377  GGNQFGQLGTGGDQAETLP-RLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWG 431
            G   FGQLG G     T P  +   P       K +     H   ++D G+++ WG
Sbjct: 977  GSGSFGQLGNGSTTKITSPVPVYGLPE----PIKCIYTAYFHNLALSDVGRLYTWG 1028



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 57/148 (38%), Positives = 80/148 (54%), Gaps = 7/148 (4%)

Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGS-TDDELSPNCVSSLLGIQIE--GVAAGL 361
           +  G  H+A I +   L T+G   YG  G G       +PN VS  + I++E   VA G 
Sbjct: 800 LGAGWAHAAHIRNH-KLYTWGHSSYGCLGVGPHMTKTATPNPVSWFVYIRVEVIQVACGR 858

Query: 362 WHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
            H+I ++++G VY++G N +GQLGTG       P L+D  SL N    SVS G  H+  I
Sbjct: 859 NHSIALTTNG-VYSWGSNHYGQLGTGRRGQAPYPMLVD--SLSNELIVSVSAGQYHSLAI 915

Query: 422 ADDGKVFCWGWNKYGQLGLGDVIDRNIP 449
           +  G+++ WGW  YGQLG G + D   P
Sbjct: 916 SASGQLWTWGWGVYGQLGHGAIDDCEKP 943



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 93/360 (25%), Positives = 151/360 (41%), Gaps = 60/360 (16%)

Query: 53   GCGFAMAIS-DSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEAS--IVKAAAGWAH 109
             CG   +I+  +  + +WGS +  GQ  + +G+ G+ P P  + + ++  IV  +AG  H
Sbjct: 855  ACGRNHSIALTTNGVYSWGS-NHYGQ--LGTGRRGQAPYPMLVDSLSNELIVSVSAGQYH 911

Query: 110  CVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQ-VSPRSQVSRS 168
             +A++  G+++TWGW        V+G L  G   D +  +   S   E  +S     S S
Sbjct: 912  SLAISASGQLWTWGWG-------VYGQLGHGAIDDCEKPKLLKSLENENIISAYGGYSHS 964

Query: 169  SGGTSSG---TDGRGS-GEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
               TS+G   T G GS G+ G               + S  +  S  P      P   I 
Sbjct: 965  IILTSNGKVFTFGSGSFGQLG---------------NGSTTKITSPVPVYGLPEP---IK 1006

Query: 225  TVAAGGRHTLALSDIGQVWGWG-------YGGEGQLGLGSRIRMVSSPHPIPC-IESSYG 276
             +     H LALSD+G+++ WG       +  + Q    +++ +          I++   
Sbjct: 1007 CIYTAYFHNLALSDVGRLYTWGSSPQVLRFHAQSQKRARNQLVLNEGDQADDAEIDALTA 1066

Query: 277  KDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGS 336
             D    LS   V++      + G+  + + CG  HSAVI+  G L T+G  L GQ G   
Sbjct: 1067 DDGLLHLSPTLVDTS----HISGDIFQ-MCCGCHHSAVISTTGQLYTWGLNLDGQLGVSG 1121

Query: 337  TDDELSPNCV-----------SSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLG 385
              + L P              SS  G  I+ V  G   T+ + +   ++ +G N  GQLG
Sbjct: 1122 IRERLVPTVTLVGPPSVIVDSSSTSGSLIKEVRCGADFTLALDAANKLWGWGSNHEGQLG 1181


>gi|387541132|gb|AFJ71193.1| RCC1 and BTB domain-containing protein 2 [Macaca mulatta]
          Length = 551

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 60/166 (36%), Positives = 97/166 (58%), Gaps = 3/166 (1%)

Query: 309 GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS-LLGIQIEGVAAGLWHTICI 367
           G H  + T  G + T+G   Y Q G G+T+  L P  +S+ L   Q+  VA G +H++ +
Sbjct: 108 GPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVL 167

Query: 368 SSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKV 427
           +SDG+V+A+G N  GQ+G+G    + +PR +    L+N    +++CG      + D G+V
Sbjct: 168 TSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTG-CLQNKVVVTIACGQMCCMAVVDTGEV 226

Query: 428 FCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
           + WG+N  GQLGLG   ++  P +V  ++G   + VACG+ HTL+L
Sbjct: 227 YVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 272



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 124/253 (49%), Gaps = 31/253 (12%)

Query: 220 GVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
           G +IA+++ G G H +  +  G+V+ WG+    QLG G+     ++   +PC  S+    
Sbjct: 97  GKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT-----TNHGLVPCQIST---- 147

Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
                             +    V  +ACG  HS V+T  G +  +G+   GQ G GST 
Sbjct: 148 -----------------NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTV 190

Query: 339 DELSPNCVSSLLGIQIE-GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
           ++  P  V+  L  ++   +A G    + +   G+VY +G N  GQLG G    +  P  
Sbjct: 191 NQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCR 250

Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE-G 456
           + A  L+ +  + V+CG  HT V+ D+G+V+ WG N YGQLG G+  +++ P+ VT+E  
Sbjct: 251 VAA--LQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTMEKD 308

Query: 457 CVPRNVACGWWHT 469
            +    AC   HT
Sbjct: 309 RIIEIAACHSTHT 321



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 70/231 (30%), Positives = 109/231 (47%), Gaps = 30/231 (12%)

Query: 203 SGDENLSAFPCLVTLN-PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
           +G  N    PC ++ N    ++  VA G  H+L L+  G+V+ WGY   GQ+G GS +  
Sbjct: 133 NGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVN- 191

Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
                PIP         R     +  V             V  IACG      + D G +
Sbjct: 192 ----QPIP--------RRVTGCLQNKV-------------VVTIACGQMCCMAVVDTGEV 226

Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
             +G+   GQ G GS+ ++ +P  V++L GI+++ VA G  HT+ ++ +G VYA+G N +
Sbjct: 227 YVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSY 286

Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
           GQLGTG    ++ P  +       +  +  +C + HT A     G V+ WG
Sbjct: 287 GQLGTGNKSNQSYPTPVTMEKDRII--EIAACHSTHTSAAKTQGGHVYMWG 335



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 3/105 (2%)

Query: 370 DGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFC 429
           + +++  G N  G LG G  Q+   PR LD+ S + + S S   G  H  +   +G+VF 
Sbjct: 64  NDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIASLSYGSGP-HIVLATTEGEVFT 122

Query: 430 WGWNKYGQLGLGDVIDRNIPSQVTIEGCVPR--NVACGWWHTLLL 472
           WG N Y QLG G      +P Q++      +   VACG +H+L+L
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVL 167



 Score = 39.3 bits (90), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 55/133 (41%), Gaps = 17/133 (12%)

Query: 14  VFMWGYL-PGALPQRSPILSPLVVRLP--LTVGSAWRDVCGGGCGFAMAISDSRKLITWG 70
           VF WGY   G +   S +  P+  R+   L         CG  C   MA+ D+ ++  WG
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMC--CMAVVDTGEVYVWG 230

Query: 71  STDDLGQSYVTSGKHGEIPEPFPLPTEASI--VKAAAGWAHCVAVTEGGEVYTWGWKECV 128
                G   +  G  G  P P  +     I   + A G+AH + +T+ G+VY WG     
Sbjct: 231 YN---GNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG----- 282

Query: 129 PSGRVFGDLSTGT 141
                +G L TG 
Sbjct: 283 --ANSYGQLGTGN 293


>gi|325180310|emb|CCA14713.1| regulator of chromosome condensation (RCC1)like protein putative
           [Albugo laibachii Nc14]
          Length = 393

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/235 (30%), Positives = 112/235 (47%), Gaps = 28/235 (11%)

Query: 203 SGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMV 262
           S ++++ + P +V    G++I  ++ G  HT A+ + G+++ WG+GG    G G+     
Sbjct: 82  SSNQDIQSIPRVVDALRGIKIVDISCGEYHTGAVDEEGKLFTWGWGGSTMKGSGALGHAG 141

Query: 263 SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL 322
                IP             L R  V+   P        VK + CG  H+  +T  G + 
Sbjct: 142 GEDESIP------------RLVRTLVDQGVP--------VKSVECGELHTVALTKDGEIW 181

Query: 323 TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFG 382
            +G G YG+ G G++D+   P  V       I  ++AG   T  I+  G+VY++G N   
Sbjct: 182 AWGNGEYGRLGNGASDNFEVPEPVEYFADENIASISAGRDFTFAITEHGEVYSWGINSHS 241

Query: 383 QLGTGGD------QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWG 431
           QLG GG         ET+P +++A  L NV+   VS G  H A + +DGK+F WG
Sbjct: 242 QLGLGGGLTVDYYNMETIPVVVEA--LSNVNVAQVSAGYDHAAAVTNDGKMFMWG 294



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 79/274 (28%), Positives = 126/274 (45%), Gaps = 44/274 (16%)

Query: 203 SGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMV 262
           S  E LS  P ++    G  IA +  G  H+ A+   G+++ WG     QLG GS  + +
Sbjct: 30  SSYEELS--PRILETFEGKNIAKLDFGATHSAAIDKEGKLYTWGSNEYHQLGHGSSNQDI 87

Query: 263 SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL 322
            S   IP +  +                      + G  +  I+CG  H+  + + G L 
Sbjct: 88  QS---IPRVVDA----------------------LRGIKIVDISCGEYHTGAVDEEGKLF 122

Query: 323 TFGWGLY-----GQCGQGSTDDELSPNCVSSLL--GIQIEGVAAGLWHTICISSDGDVYA 375
           T+GWG       G  G    +DE  P  V +L+  G+ ++ V  G  HT+ ++ DG+++A
Sbjct: 123 TWGWGGSTMKGSGALGHAGGEDESIPRLVRTLVDQGVPVKSVECGELHTVALTKDGEIWA 182

Query: 376 FGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKY 435
           +G  ++G+LG G      +P  ++  + EN+   S+S G   T  I + G+V+ WG N +
Sbjct: 183 WGNGEYGRLGNGASDNFEVPEPVEYFADENI--ASISAGRDFTFAITEHGEVYSWGINSH 240

Query: 436 GQLGLG-----DVID-RNIPSQVTIEGCVPRNVA 463
            QLGLG     D  +   IP  V +E     NVA
Sbjct: 241 SQLGLGGGLTVDYYNMETIP--VVVEALSNVNVA 272



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 110/235 (46%), Gaps = 28/235 (11%)

Query: 236 LSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF 295
           +S    V+ WG G +GQLG GS  +          I SSY +     L            
Sbjct: 1   MSTQSTVFTWGTGTQGQLGHGSFEK--------TGIRSSYEELSPRILET---------- 42

Query: 296 RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS--PNCVSSLLGIQ 353
              G  +  +  G  HSA I   G L T+G   Y Q G GS++ ++   P  V +L GI+
Sbjct: 43  -FEGKNIAKLDFGATHSAAIDKEGKLYTWGSNEYHQLGHGSSNQDIQSIPRVVDALRGIK 101

Query: 354 IEGVAAGLWHTICISSDGDVYAFG--GNQF---GQLGTGGDQAETLPRLLDAPSLENVHS 408
           I  ++ G +HT  +  +G ++ +G  G+     G LG  G + E++PRL+     + V  
Sbjct: 102 IVDISCGEYHTGAVDEEGKLFTWGWGGSTMKGSGALGHAGGEDESIPRLVRTLVDQGVPV 161

Query: 409 KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVA 463
           KSV CG  HT  +  DG+++ WG  +YG+LG G   +  +P  V  E     N+A
Sbjct: 162 KSVECGELHTVALTKDGEIWAWGNGEYGRLGNGASDNFEVPEPV--EYFADENIA 214



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 98/376 (26%), Positives = 156/376 (41%), Gaps = 59/376 (15%)

Query: 53  GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGE-IPEPFPLPTEASIVKAAAGWAHCV 111
           G   + AI    KL TWGS +     + +S +  + IP          IV  + G  H  
Sbjct: 54  GATHSAAIDKEGKLYTWGSNEYHQLGHGSSNQDIQSIPRVVDALRGIKIVDISCGEYHTG 113

Query: 112 AVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG 171
           AV E G+++TWGW      G   G L    G D+ +  R    L +Q  P   V      
Sbjct: 114 AVDEEGKLFTWGWGGSTMKGS--GALGHAGGEDESI-PRLVRTLVDQGVPVKSVECGELH 170

Query: 172 TSSGT-DGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATV 226
           T + T DG     G+GE G    R+           +G  +    P  V       IA++
Sbjct: 171 TVALTKDGEIWAWGNGEYG----RLG----------NGASDNFEVPEPVEYFADENIASI 216

Query: 227 AAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM-VSSPHPIPCIESSYGKDRSAALSR 285
           +AG   T A+++ G+V+ WG     QLGLG  + +   +   IP +          ALS 
Sbjct: 217 SAGRDFTFAITEHGEVYSWGINSHSQLGLGGGLTVDYYNMETIPVV--------VEALS- 267

Query: 286 GSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNC 345
            +VN            V  ++ G  H+A +T+ G +  +G  L+           L P+ 
Sbjct: 268 -NVN------------VAQVSAGYDHAAAVTNDGKMFMWGAKLW-----------LEPHE 303

Query: 346 VSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLEN 405
           ++ L    I  V  G ++T  +S+ G+++ FG      LG G  + +  P L+++ +  N
Sbjct: 304 MTILKDETIISVQCGRYYTAALSASGNLFTFGKGHSNCLGHGERKTQLQPLLVESLNRYN 363

Query: 406 VHSKSVSCGARHTAVI 421
           V   S++CG  H   +
Sbjct: 364 V--VSMTCGYSHMGAL 377


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.316    0.136    0.431 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,544,648,143
Number of Sequences: 23463169
Number of extensions: 402065497
Number of successful extensions: 1154839
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4491
Number of HSP's successfully gapped in prelim test: 1306
Number of HSP's that attempted gapping in prelim test: 1037666
Number of HSP's gapped (non-prelim): 48440
length of query: 477
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 331
effective length of database: 8,933,572,693
effective search space: 2957012561383
effective search space used: 2957012561383
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 79 (35.0 bits)