BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011775
(477 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FN03|UVR8_ARATH Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana GN=UVR8 PE=1
SV=1
Length = 440
Score = 157 bits (396), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 126/411 (30%), Positives = 187/411 (45%), Gaps = 62/411 (15%)
Query: 49 VCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEAS------IVK 102
+ G ++A+ + +WG +D GQ HG+ E P PT+ S IV
Sbjct: 19 IISAGASHSVALLSGDIVCSWGRGED-GQL-----GHGD-AEDRPSPTQLSALDGHQIVS 71
Query: 103 AAAGWAHCVAVTEGG-EVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSP 161
G H VA ++ G EVY+WGW + FG L G G D+F +
Sbjct: 72 VTCGADHTVAYSQSGMEVYSWGWGD-------FGRL--GHGNSSDLFTPLPIKALHGIRI 122
Query: 162 RSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGV 221
+ S + +G ++ ++ L GD S P + G+
Sbjct: 123 KQIACGDSHCLAVTMEGEVQSWGRNQNGQLGL----------GDTEDSLVPQKIQAFEGI 172
Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
RI VAAG HT A+++ G ++GWG+G G LGLG DR+
Sbjct: 173 RIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLG---------------------DRTD 211
Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL 341
L V S G G + +ACG RH+ ++ +GAL T+GW YGQ G G +D L
Sbjct: 212 RLVPERVTSTG------GEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHL 265
Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
P+ + +L I ++ G HT+ ++SDG +Y +G N+FGQ+G G + + P + P
Sbjct: 266 IPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP 325
Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
+ V VSCG RHT + + VF WG GQLG+G+ +DRN P +
Sbjct: 326 DDQKV--VQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKII 374
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 130/262 (49%), Gaps = 30/262 (11%)
Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
P + G+RI +A G H LA++ G+V WG GQLGLG + P I
Sbjct: 111 PLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLV-PQKIQAF 169
Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
E G +K +A G H+A +T+ G L +GWG YG
Sbjct: 170 E--------------------------GIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGN 203
Query: 332 CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
G G D L P V+S G ++ VA G HTI +S G +Y +G +++GQLG G +
Sbjct: 204 LGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLED 263
Query: 392 ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
+P L+A L N +S G RHT + DGK++ WGWNK+GQ+G+G+ +D+ P Q
Sbjct: 264 HLIPHKLEA--LSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQ 321
Query: 452 VTI-EGCVPRNVACGWWHTLLL 472
V + V+CGW HTL +
Sbjct: 322 VRFPDDQKVVQVSCGWRHTLAV 343
Score = 136 bits (343), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 134/254 (52%), Gaps = 31/254 (12%)
Query: 219 PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
P ++ ++AG H++AL V WG G +GQLG G + P P S+
Sbjct: 13 PPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGD-----AEDRPSPTQLSA---- 63
Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA-LLTFGWGLYGQCGQGST 337
+ G+ + + CG H+ + +G + ++GWG +G+ G G++
Sbjct: 64 ------------------LDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNS 105
Query: 338 DDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
D +P + +L GI+I+ +A G H + ++ +G+V ++G NQ GQLG G + +P+
Sbjct: 106 SDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQK 165
Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC 457
+ A E + K V+ GA HTA + +DG ++ WGW +YG LGLGD DR +P +VT G
Sbjct: 166 IQA--FEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGG 223
Query: 458 VPRN-VACGWWHTL 470
+ VACGW HT+
Sbjct: 224 EKMSMVACGWRHTI 237
Score = 89.7 bits (221), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 145/334 (43%), Gaps = 55/334 (16%)
Query: 85 HGEIPEPF-PLPTEA----SIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLST 139
HG + F PLP +A I + A G +HC+AVT GEV +WG + G L
Sbjct: 102 HGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQN-------GQLGL 154
Query: 140 GTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTD--GRGSGEEGSKRRRISLAKQT 197
G D V ++ +F ++ + + + + D G G G G+ + L
Sbjct: 155 GDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGN----LGL---- 206
Query: 198 AESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS 257
GD P VT G +++ VA G RHT+++S G ++ +G+ GQLG G
Sbjct: 207 ------GDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGD 260
Query: 258 RIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITD 317
+ PH + + +S ++ I+ G RH+ +T
Sbjct: 261 -LEDHLIPHKLEALSNS--------------------------FISQISGGWRHTMALTS 293
Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
G L +GW +GQ G G+ D+ SP V ++ V+ G HT+ ++ +V+A+G
Sbjct: 294 DGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWG 353
Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSV 411
GQLG G P++++A S++ + +
Sbjct: 354 RGTNGQLGIGESVDRNFPKIIEALSVDGASGQHI 387
>sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens GN=HERC1
PE=1 SV=2
Length = 4861
Score = 126 bits (316), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/244 (34%), Positives = 128/244 (52%), Gaps = 31/244 (12%)
Query: 232 HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSE 291
H++AL++ G+V+ WG G G+LG G+ R P I ++
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQ------------------- 4132
Query: 292 GPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG 351
G V ++CG +HSAV+T G L TFG G YG+ G G+T ++ P V++L G
Sbjct: 4133 -------GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEG 4185
Query: 352 IQIEGVAAGLWHTICISSDGD-VYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
QI VA GL HT+ +S+DG V+AFG +G+LG G A++ P+ +D L + K
Sbjct: 4186 YQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDV--LCGIGIKK 4243
Query: 411 VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWWHT 469
V+CG + + + DG V+ +G ++ L G + N P Q+ + G + +VA G HT
Sbjct: 4244 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHT 4303
Query: 470 LLLA 473
L LA
Sbjct: 4304 LALA 4307
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 105/200 (52%), Gaps = 6/200 (3%)
Query: 275 YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
+G R L+ N P + + + CG + VI G +L G G YG+ GQ
Sbjct: 4002 WGAGRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQ 4061
Query: 335 GSTDDELSPNCVSSLLGIQIEGVAAGL---WHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
G++DD +S+L G + + H++ ++ G+V+++G +G+LG G
Sbjct: 4062 GNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDR 4121
Query: 392 ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
+ PR ++A E V +SCG +H+AV+ DGK+F +G YG+LGLG+ ++ +P +
Sbjct: 4122 QRRPRQIEALQGEEV--VQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPER 4179
Query: 452 VT-IEGCVPRNVACGWWHTL 470
VT +EG VACG HTL
Sbjct: 4180 VTALEGYQIGQVACGLNHTL 4199
Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 113/393 (28%), Positives = 165/393 (41%), Gaps = 75/393 (19%)
Query: 41 TVGSAWRDVCGGGCGFAMAISD--------SRKLITWGSTDDLGQSYVTSGKHGEIPEPF 92
+ A + +CG C F + + S + G++DDL V S G +
Sbjct: 4025 SFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVV--- 4081
Query: 93 PLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQS 152
+V + H +A+TE GEV++WG + +G L G D+ RQ
Sbjct: 4082 -----TQLVTSCGSDGHSMALTESGEVFSWGDGD-------YGKLGHGNS-DRQRRPRQI 4128
Query: 153 SFLT-EQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDEN 207
L E+V S + S +S DG+ G+G+ G R+ L G+ +
Sbjct: 4129 EALQGEEVVQMSCGFKHSAVVTS--DGKLFTFGNGDYG----RLGL----------GNTS 4172
Query: 208 LSAFPCLVTLNPGVRIATVAAGGRHTLALS-DIGQVWGWGYGGEGQLGLGSRIRMVSSPH 266
P VT G +I VA G HTLA+S D VW +G G G+LGLG+ SSP
Sbjct: 4173 NKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK-SSPQ 4231
Query: 267 PIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGW 326
I + G +K +ACG + S +T G + TFG
Sbjct: 4232 KIDVL--------------------------CGIGIKKVACGTQFSVALTKDGHVYTFGQ 4265
Query: 327 GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
+G + P + L G+ IE VA G HT+ ++S+GDVYA+G N GQLG
Sbjct: 4266 DRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL 4325
Query: 387 GGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
G P L+ +NV + +S G H+A
Sbjct: 4326 GHTNHVREPTLVTGLQGKNV--RQISAGRCHSA 4356
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 132/298 (44%), Gaps = 35/298 (11%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAG---GRHTLALSDIGQVWGWGYGGEGQLGLGSRI- 259
GD N + +T P I V++ HTLA + G+V+ WG G G+LG G+
Sbjct: 438 GDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSST 497
Query: 260 ----RMVSSP---HPIPCIESSY---------------GKDRSAALSRGSVNSEG-PGFR 296
+++ P + C+ + Y G+ L G NS P
Sbjct: 498 QKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLV 557
Query: 297 VPGNYVKGIACGGRHSAVITDAGALL-TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
+ V ++CG H+ ++ G + +FG G G+ G G T+ P + +L G+ I
Sbjct: 558 KDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIR 617
Query: 356 GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL-PRLLDAPSLENVHSKSVSCG 414
V AG ++ ++S G VYA+G LG G +A L P+L++ L VS G
Sbjct: 618 KVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE--ELAATRIVDVSIG 673
Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVI-DRNIPSQVT-IEGCVPRNVACGWWHTL 470
H ++ D +V+ WG N GQ G G+ P +V+ ++G + ++ G H+L
Sbjct: 674 DSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 95/174 (54%), Gaps = 5/174 (2%)
Query: 303 KGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW 362
+ I G + VI+ G++ G G YG+ G G ++++ + ++ I+ V++
Sbjct: 406 QTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKG 465
Query: 363 ---HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
HT+ +++G+V+++G +G+LG G + P+L+ P L+ VS G RH+A
Sbjct: 466 SDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCVSAGYRHSA 524
Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
+ +DG+++ WG +G+LG GD RNIP+ V V V+CG HT+ L+
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG-EVSCGSSHTIALS 577
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 112/251 (44%), Gaps = 31/251 (12%)
Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
T+ AG T +S G V G G G+LGLG S + + ++ RS
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLG------DSNNQSTLKKLTFEPHRSIKKV 460
Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPN 344
S S+G H+ T G + ++G G YG+ G G++ + P
Sbjct: 461 SSSKGSDG------------------HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPK 502
Query: 345 CVS-SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSL 403
+ L G + V+AG H+ ++ DG++Y +G FG+LG G + +P L+ +
Sbjct: 503 LIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK--DI 560
Query: 404 ENVHSKSVSCGARHTAVIADDGK-VFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRN 461
NV VSCG+ HT ++ DG+ V+ +G G+LG GD P + ++G R
Sbjct: 561 SNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRK 618
Query: 462 VACGWWHTLLL 472
V G +L L
Sbjct: 619 VCAGSQSSLAL 629
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 130/324 (40%), Gaps = 67/324 (20%)
Query: 52 GGCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVK-AAAGWA 108
G G +A + ++ +WG D LG ++ K+ P+ P + +V +AG+
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY---PKLIQGPLQGKVVVCVSAGYR 521
Query: 109 HCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRS 168
H AVTE GE+YTWG + FG L G D R L + +S +VS
Sbjct: 522 HSAAVTEDGELYTWGEGD-------FGRLGHG-----DSNSRNIPTLVKDISNVGEVSCG 569
Query: 169 SGGTSS-GTDGR-----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVR 222
S T + DGR G G+ G GD N P ++ G+
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKL--------------GHGDTNRVYKPKVIEALQGMF 615
Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
I V AG + +LAL+ GQV+ WG G LG GS P I
Sbjct: 616 IRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIE------------- 660
Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
+ + ++ G H ++ + +G GQCGQG++ ++
Sbjct: 661 -------------ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPIT 707
Query: 343 -PNCVSSLLGIQIEGVAAGLWHTI 365
P VS L GI I+ ++AG H++
Sbjct: 708 KPKKVSGLDGIAIQQISAGTSHSL 731
Score = 45.4 bits (106), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
+S +VY +G N QL G + P+L APS + ++++ G T VI+ DG
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKL--APSFSD--AQTIEAGQYCTFVISTDGS 423
Query: 427 VFCWGWNKYGQLGLGDVIDRNIPSQVTIE 455
V G YG+LGLGD +++ ++T E
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFE 452
Score = 37.0 bits (84), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Query: 372 DVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWG 431
DVY +G + GQL G +P APS ++ V CG T VI +G V G
Sbjct: 3998 DVYLWGAGRHGQLAEAGRNV-MVPAA--APSFS--QAQQVICGQNCTFVIQANGTVLACG 4052
Query: 432 WNKYGQLGLGDVIDRNIPSQVT 453
YG+LG G+ D ++ + ++
Sbjct: 4053 EGSYGRLGQGNSDDLHVLTVIS 4074
>sp|Q6PAV2|HERC4_MOUSE Probable E3 ubiquitin-protein ligase HERC4 OS=Mus musculus GN=Herc4
PE=2 SV=2
Length = 1057
Score = 119 bits (297), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 82/249 (32%), Positives = 112/249 (44%), Gaps = 30/249 (12%)
Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
I VA G HTLAL+D GQV+ WG +GQLGL + P I +
Sbjct: 86 IVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQ------- 138
Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDEL 341
+ +ACG HS ++ A + +G YGQ G G +
Sbjct: 139 -------------------IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQT 179
Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
SP + SLLGI VAAG H+ ++ G ++ +G N+FGQLG + +P LL
Sbjct: 180 SPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLL--K 237
Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
SL + + CG HTA + +G VF +G YGQLG P +V + G +
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297
Query: 461 NVACGWWHT 469
VACG HT
Sbjct: 298 QVACGRQHT 306
Score = 99.0 bits (245), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 143/365 (39%), Gaps = 75/365 (20%)
Query: 37 RLPLTVGSAWRDVCGGGCGF--AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPL 94
R V RDV GCG + + D + T G +DLGQ + K + PE
Sbjct: 27 RSDFFVNKKVRDV---GCGLRHTVFVLDDGTVYTCGC-NDLGQ--LGHEKSRKKPEQVVA 80
Query: 95 PTEASIVKAAAGWAHCVAVTEGGEVYTWGW-----------KECVPSGRVFGDLSTGTGL 143
+IV A G AH +A+ + G+VY WG +EC+ R LS
Sbjct: 81 LDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLS----- 135
Query: 144 DKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSS 203
D + + + ++ G G G G I KQT+
Sbjct: 136 DIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG----------IDCQKQTS----- 180
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
P L+ G+ VAAGG H+ L+ G ++GWG GQLGL
Sbjct: 181 --------PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE----- 227
Query: 264 SPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLT 323
DR S+ S+ + I CG H+A +T G + T
Sbjct: 228 -------------NDRYVPNLLKSLRSQK---------IVYICCGEDHTAALTKEGGVFT 265
Query: 324 FGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT-ICISSDGDVYAFGGNQFG 382
FG G YGQ G ST E++P V L+G + VA G HT + S G +Y+FG G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 383 QLGTG 387
QLGTG
Sbjct: 326 QLGTG 330
Score = 99.0 bits (245), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 108/235 (45%), Gaps = 33/235 (14%)
Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
++I VA G H+LALS +V+ WG GQLGLG + +SP I+S G
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQ---LIKSLLG---- 189
Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTD 338
+P +A GG HS V+T +GA+ FGWG +GQ G +
Sbjct: 190 ----------------IP---FMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDEN 228
Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
D PN + SL +I + G HT ++ +G V+ FG +GQLG E PR
Sbjct: 229 DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR-- 286
Query: 399 DAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
L V+CG +HT A + G+++ +G GQLG G +R P V
Sbjct: 287 KVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 93.2 bits (230), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 91/176 (51%), Gaps = 7/176 (3%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
V+ + CG RH+ + D G + T G GQ G + + P V +L I VA G
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVACGE 93
Query: 362 WHTICISSDGDVYAFGGNQFGQLG-TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
HT+ ++ G VYA+G + GQLG G ++ +PR + SL ++ V+CG H+
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLA 151
Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
++ +VFCWG NKYGQLGLG + Q+ ++ G VA G H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL 207
Score = 82.0 bits (201), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 14/160 (8%)
Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
+L +G YGQ G G D+E L P + ++ V GL HT+ + DG VY G
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
N GQL G +++ P + A +N+ +V+CG HT + D G+V+ WG + GQL
Sbjct: 61 NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVACGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 439 GLGDV-----IDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
GL + RNI S I+ VACG++H+L L+
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALS 153
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 123/304 (40%), Gaps = 48/304 (15%)
Query: 47 RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
+++ CG A +A++D ++ WG D S + +P ++ IV+ A
Sbjct: 84 QNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
G+ H +A+++ EV+ WG + +G L GL D ++ S L + +
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK-------YGQL----GLGIDCQKQTSPQLIKSLLGIPF 192
Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
+ ++GG S G R + DEN P L+ +I
Sbjct: 193 MQVAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRSQKIV 245
Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
+ G HT AL+ G V+ +G GG GQLG S + +P +
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 288
Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
F + G+ V +ACG +H SA + +G + +FG G GQ G GST + SP
Sbjct: 289 ----------FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Query: 344 NCVS 347
V
Sbjct: 339 FTVK 342
>sp|Q5PQN1|HERC4_RAT Probable E3 ubiquitin-protein ligase HERC4 OS=Rattus norvegicus
GN=Herc4 PE=2 SV=1
Length = 1057
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 112/249 (44%), Gaps = 30/249 (12%)
Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
I V+ G HTLAL+D GQV+ WG +GQLGL + P I +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQ------- 138
Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDDEL 341
+ +ACG HS ++ A + +G YGQ G G +
Sbjct: 139 -------------------IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQT 179
Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
SP + SLLGI VAAG H+ ++ G ++ +G N+FGQLG + +P LL
Sbjct: 180 SPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLL--K 237
Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
SL + + CG HTA + +G VF +G YGQLG P +V + G +
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297
Query: 461 NVACGWWHT 469
+ACG HT
Sbjct: 298 QIACGRQHT 306
Score = 97.1 bits (240), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 142/360 (39%), Gaps = 75/360 (20%)
Query: 42 VGSAWRDVCGGGCGF--AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEAS 99
V RDV GCG + + D + T G +DLGQ + K + PE +
Sbjct: 32 VNKKVRDV---GCGLRHTVFVLDDGTVYTCGC-NDLGQ--LGHEKSRKKPEQVVALDAQN 85
Query: 100 IVKAAAGWAHCVAVTEGGEVYTWGW-----------KECVPSGRVFGDLSTGTGLDKDVF 148
IV + G AH +A+ + G+VY WG +EC+ R LS D +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLS-----DIQIV 140
Query: 149 ERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENL 208
+ + ++ G G G G I KQT+
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLG----------IECQKQTS---------- 180
Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
P L+ G+ VAAGG H+ L+ G ++GWG GQLGL
Sbjct: 181 ---PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE---------- 227
Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL 328
DR S+ S+ + I CG H+A +T G + TFG G
Sbjct: 228 --------NDRYVPNLLKSLRSQK---------IVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT-ICISSDGDVYAFGGNQFGQLGTG 387
YGQ G ST E++P V L+G + +A G HT + S G +Y+FG GQLGTG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 92.4 bits (228), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 7/176 (3%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
V+ + CG RH+ + D G + T G GQ G + + P V +L I V+ G
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93
Query: 362 WHTICISSDGDVYAFGGNQFGQLG-TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
HT+ ++ G VYA+G + GQLG G ++ +PR + SL ++ V+CG H+
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLA 151
Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
++ +VFCWG NKYGQLGLG + Q+ ++ G VA G H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL 207
Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 82/160 (51%), Gaps = 14/160 (8%)
Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
+L +G YGQ G G D+E L P + ++ V GL HT+ + DG VY G
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
N GQL G +++ P + A +N+ +VSCG HT + D G+V+ WG + GQL
Sbjct: 61 NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 439 GLGDV-----IDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
GL + RNI S I+ VACG++H+L L+
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALS 153
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 121/304 (39%), Gaps = 48/304 (15%)
Query: 47 RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
+++ CG A +A++D ++ WG D S + +P ++ IV+ A
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
G+ H +A+++ EV+ WG + +G L G K + S L + +
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK-------YGQLGLGIECQK----QTSPQLIKSLLGIPF 192
Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
+ ++GG S G R + DEN P L+ +I
Sbjct: 193 MQVAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRSQKIV 245
Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
+ G HT AL+ G V+ +G GG GQLG S + +P +
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 288
Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
F + G+ V IACG +H SA + +G + +FG G GQ G GST + SP
Sbjct: 289 ----------FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Query: 344 NCVS 347
V
Sbjct: 339 FTVK 342
>sp|Q5GLZ8|HERC4_HUMAN Probable E3 ubiquitin-protein ligase HERC4 OS=Homo sapiens GN=HERC4
PE=1 SV=1
Length = 1057
Score = 116 bits (291), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 113/249 (45%), Gaps = 30/249 (12%)
Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
I V+ G HTLAL+D GQV+ WG +GQLGL + P I +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQ------- 138
Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDEL 341
+ +ACG HS ++ A + +G YGQ G G+ +
Sbjct: 139 -------------------IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQT 179
Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
SP + SLLGI VAAG H+ ++ G ++ +G N+FGQLG + +P LL
Sbjct: 180 SPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK-- 237
Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPR 460
SL + + CG HTA + +G VF +G YGQLG P +V + G +
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297
Query: 461 NVACGWWHT 469
+ACG HT
Sbjct: 298 EIACGRQHT 306
Score = 99.4 bits (246), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 109/235 (46%), Gaps = 33/235 (14%)
Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
++I VA G H+LALS +V+ WG GQLGLG+ + +SP ++S G
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQ---LLKSLLG---- 189
Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL--YGQCGQGSTD 338
+P +A GG HS V+T +GA+ FGWG +GQ G +
Sbjct: 190 ----------------IP---FMQVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDEN 228
Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
D PN + SL +I + G HT ++ +G V+ FG +GQLG E PR
Sbjct: 229 DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR-- 286
Query: 399 DAPSLENVHSKSVSCGARHT-AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV 452
L ++CG +HT A + G+++ +G GQLG G +R P V
Sbjct: 287 KVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/360 (27%), Positives = 142/360 (39%), Gaps = 75/360 (20%)
Query: 42 VGSAWRDVCGGGCGF--AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEAS 99
+ RDV GCG + + D + T G +DLGQ + K + PE +
Sbjct: 32 INKRVRDV---GCGLRHTVFVLDDGTVYTCGC-NDLGQ--LGHEKSRKKPEQVVALDAQN 85
Query: 100 IVKAAAGWAHCVAVTEGGEVYTWGW-----------KECVPSGRVFGDLSTGTGLDKDVF 148
IV + G AH +A+ + G+VY WG +EC+ R LS D +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLS-----DIQIV 140
Query: 149 ERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENL 208
+ + ++ G G G G+ KQT+
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGT----------DCKKQTS---------- 180
Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
P L+ G+ VAAGG H+ L+ G ++GWG GQLGL
Sbjct: 181 ---PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE---------- 227
Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL 328
DR S+ S+ + I CG H+A +T G + TFG G
Sbjct: 228 --------NDRYVPNLLKSLRSQK---------IVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT-ICISSDGDVYAFGGNQFGQLGTG 387
YGQ G ST E++P V L+G + +A G HT + S G +Y+FG GQLGTG
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 92.8 bits (229), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 7/176 (3%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
V+ + CG RH+ + D G + T G GQ G + + P V +L I V+ G
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGE 93
Query: 362 WHTICISSDGDVYAFGGNQFGQLG-TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
HT+ ++ G VYA+G + GQLG G ++ +PR + SL ++ V+CG H+
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLA 151
Query: 421 IADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLAV 474
++ +VFCWG NKYGQLGLG + Q+ ++ G VA G H+ +L +
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL 207
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 14/160 (8%)
Query: 321 LLTFGWGLYGQCGQGSTDDE--LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
+L +G +GQ G G D+E L P + ++ V GL HT+ + DG VY G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
N GQL G +++ P + A +N+ +VSCG HT + D G+V+ WG + GQL
Sbjct: 61 NDLGQL--GHEKSRKKPEQVVALDAQNI--VAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 439 GL-----GDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
GL + RNI S I+ VACG++H+L L+
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALS 153
Score = 72.4 bits (176), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 124/304 (40%), Gaps = 48/304 (15%)
Query: 47 RDVCGGGCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAA 104
+++ CG A +A++D ++ WG D V S + +P ++ IV+ A
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQ 164
G+ H +A+++ EV+ WG + +G L GT D ++ S L + +
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK-------YGQLGLGT----DCKKQTSPQLLKSLLGIPF 192
Query: 165 VSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIA 224
+ ++GG S G R + DEN P L+ +I
Sbjct: 193 MQVAAGGAHSFVLTLSGAIFGWGRNKFG-------QLGLNDENDRYVPNLLKSLRSQKIV 245
Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALS 284
+ G HT AL+ G V+ +G GG GQLG S + +P +
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKV---------------- 288
Query: 285 RGSVNSEGPGFRVPGNYVKGIACGGRH-SAVITDAGALLTFGWGLYGQCGQGSTDDELSP 343
F + G+ V IACG +H SA + +G + +FG G GQ G GST + SP
Sbjct: 289 ----------FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Query: 344 NCVS 347
V
Sbjct: 339 FTVK 342
>sp|Q9UII4|HERC5_HUMAN E3 ISG15--protein ligase HERC5 OS=Homo sapiens GN=HERC5 PE=1 SV=2
Length = 1024
Score = 116 bits (290), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 129/269 (47%), Gaps = 33/269 (12%)
Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI------PCIESSY 275
+I + G H+LALS G+++ WG GQLG+G + ++P + P + S
Sbjct: 139 KIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISA 198
Query: 276 GKDRSAALSR-GSVNS-----------------EGPGFR--VPGNYVKGIACGGRHSAVI 315
G+ S ALS G++ S + P + V+ +ACGG HSA++
Sbjct: 199 GEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALL 258
Query: 316 TDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD-GDVY 374
T G L TFG G +GQ G ST +EL P V+ L+G ++ +A G WHT+ SD G V+
Sbjct: 259 TQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVF 318
Query: 375 AFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNK 434
+FG + GQLG GG + + +P + S E + +S + + + + W +
Sbjct: 319 SFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWIKKE 378
Query: 435 YGQLGLGDVIDRNIPSQVTIEGCVPRNVA 463
+ L R IP+ EG V R +A
Sbjct: 379 NSYVNL----KRTIPT--LNEGTVKRWIA 401
Score = 99.8 bits (247), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 92/168 (54%), Gaps = 4/168 (2%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDELSPNCVSSLLGIQIEGVAAGLWH 363
I CG HS ++ G L +G L+GQ G G +P V L G+ + ++AG H
Sbjct: 143 ITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAH 202
Query: 364 TICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
++ +S G++Y++G N+ GQLG G +++ P L++ L+N + V+CG H+A++
Sbjct: 203 SMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEG--LDNQKVEFVACGGSHSALLTQ 260
Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTL 470
DG +F +G K+GQLG + P V + G +ACG WHTL
Sbjct: 261 DGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTL 308
Score = 55.5 bits (132), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 99/229 (43%), Gaps = 57/229 (24%)
Query: 57 AMAISDSRKLITWGSTDDLGQSYVTSGKHGE--IPEPFPLPTEASIV---------KAAA 105
++A+S +L WG HG+ + FP T IV + +A
Sbjct: 150 SLALSKGGELFAWGQ-----------NLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISA 198
Query: 106 GWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQV 165
G AH +A++ G +Y+WG EC G L G KD L E + +
Sbjct: 199 GEAHSMALSMSGNIYSWGKNEC-------GQLGLGHTESKD-----DPSLIEGLDNQKVE 246
Query: 166 SRSSGGTSSG---TDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLN 218
+ GG+ S DG G+G+ G Q +S+ + PCLV
Sbjct: 247 FVACGGSHSALLTQDGLLFTFGAGKHG----------QLGHNSTQNELR----PCLVAEL 292
Query: 219 PGVRIATVAAGGRHTLA-LSDIGQVWGWGYGGEGQLGL-GSRIRMVSSP 265
G R+ +A G HTLA +SD+G+V+ +G G +GQLG G+R +++ P
Sbjct: 293 VGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLP 341
Score = 52.4 bits (124), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 99/250 (39%), Gaps = 50/250 (20%)
Query: 97 EASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLT 156
E I++ G H +A+++GGE++ WG + G L G + +
Sbjct: 137 EKKIIQITCGDYHSLALSKGGELFAWG-------QNLHGQLGVGRKFPSTT----TPQIV 185
Query: 157 EQVS--PRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCL 214
E ++ P +Q+S + S G+ K L ES P L
Sbjct: 186 EHLAGVPLAQIS-AGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDD--------PSL 236
Query: 215 VTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESS 274
+ ++ VA GG H+ L+ G ++ +G G GQLG S + PC+
Sbjct: 237 IEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNS-----TQNELRPCLV-- 289
Query: 275 YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHS-AVITDAGALLTFGWGLYGQCG 333
+E G+RV IACG H+ A ++D G + +FG G GQ G
Sbjct: 290 ---------------AELVGYRVT-----QIACGRWHTLAYVSDLGKVFSFGSGKDGQLG 329
Query: 334 QGSTDDELSP 343
G T D+L P
Sbjct: 330 NGGTRDQLMP 339
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 72/175 (41%), Gaps = 45/175 (25%)
Query: 342 SPNCVSSLLGIQIEGVAAGLWHTICISSD------------------------------- 370
+P C+ ++I V G H + +SSD
Sbjct: 87 TPKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEYDNYSMKHLRFESILQEKKIIQITCG 146
Query: 371 ----------GDVYAFGGNQFGQLGTGGD-QAETLPRLLDAPSLENVHSKSVSCGARHTA 419
G+++A+G N GQLG G + T P++++ L V +S G H+
Sbjct: 147 DYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVE--HLAGVPLAQISAGEAHSM 204
Query: 420 VIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLA 473
++ G ++ WG N+ GQLGLG ++ PS + ++ VACG H+ LL
Sbjct: 205 ALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLT 259
>sp|A6NED2|RCCD1_HUMAN RCC1 domain-containing protein 1 OS=Homo sapiens GN=RCCD1 PE=1 SV=1
Length = 376
Score = 115 bits (289), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 115/249 (46%), Gaps = 45/249 (18%)
Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFR--VPGNYVKGIACGGRHSAVITDAGALLTFGW 326
P E+ G+ +R V+ P +R P + + G H+ ++ AG + ++G
Sbjct: 125 PAGEAQAGRLPLLPCARAYVSPRAPFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGG 184
Query: 327 GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLG- 385
G +GQ G G+ + EL P + +L G+ + VAAG WH++C+S GD+Y +G N+ GQL
Sbjct: 185 GRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLAL 244
Query: 386 ----------------------------TGGDQ---------AETLPRLLDAPSLENVHS 408
TGG + + P LLD P +
Sbjct: 245 PTRNLAEDGETVAREATELNEDGSQVKRTGGAEDGAPAPFIAVQPFPALLDLPM--GSDA 302
Query: 409 KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI---EGCVPRNVACG 465
SCG+RHTAV+ G+++ WGW KYGQLG D + P +V + + V CG
Sbjct: 303 VKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYFVDKQLQVKAVTCG 362
Query: 466 WWHTLLLAV 474
W+T + AV
Sbjct: 363 PWNTYVYAV 371
Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 78/173 (45%), Gaps = 15/173 (8%)
Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
P L+ G+ +A VAAGG H++ +S+ G ++ WG+ GQL L +R + +
Sbjct: 201 PRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTR-NLAEDGETVARE 259
Query: 272 ESSYGKDRSAALSRGSVNSEGPG-----------FRVP-GNYVKGIACGGRHSAVITDAG 319
+ +D S G P +P G+ +CG RH+AV+T G
Sbjct: 260 ATELNEDGSQVKRTGGAEDGAPAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTG 319
Query: 320 ALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG--IQIEGVAAGLWHTICISSD 370
L T+GWG YGQ G T P V + +Q++ V G W+T + +
Sbjct: 320 ELYTWGWGKYGQLGHEDTTSLDRPRRVEYFVDKQLQVKAVTCGPWNTYVYAVE 372
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 88/215 (40%), Gaps = 60/215 (27%)
Query: 53 GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEI--------PEPFPLPTEASIVKA- 103
G A+ + + ++ +WG G+HG++ EP L +V A
Sbjct: 166 GAEHALLLDAAGQVFSWGG-----------GRHGQLGHGTLEAELEPRLLEALQGLVMAE 214
Query: 104 -AAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGT---GLDKDVFERQSSFLTEQV 159
AAG H V V+E G++Y WGW E G L+ T D + R+++ L E
Sbjct: 215 VAAGGWHSVCVSETGDIYIWGWNES-------GQLALPTRNLAEDGETVAREATELNED- 266
Query: 160 SPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
SQV R+ G E+G+ I++ FP L+ L
Sbjct: 267 --GSQVKRTGGA-----------EDGAPAPFIAV---------------QPFPALLDLPM 298
Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG 254
G + G RHT ++ G+++ WG+G GQLG
Sbjct: 299 GSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLG 333
>sp|Q4R828|RCCD1_MACFA RCC1 domain-containing protein 1 OS=Macaca fascicularis GN=RCCD1
PE=2 SV=1
Length = 376
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 116/246 (47%), Gaps = 45/246 (18%)
Query: 272 ESSYGKDRSAALSRGSVNSEGPGFR--VPGNYVKGIACGGRHSAVITDAGALLTFGWGLY 329
E+ G+ +R V+ P +R P + + G H+ ++ AG + ++G G +
Sbjct: 128 EAQIGRLPLLPCARAYVSPRPPFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGGGRH 187
Query: 330 GQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLG---- 385
GQ G G+ + EL P + +L G+ + VAAG WH++C+S GD+Y +G N+ GQL
Sbjct: 188 GQLGHGTLEAELEPRLLEALQGLTMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTR 247
Query: 386 -------------TGGDQ---------------------AETLPRLLDAPSLENVHSKSV 411
TG ++ + P LLD P + + V
Sbjct: 248 NLAEDGETVAREATGLNEDGSQVKRTGRVEDGAPAPFIAVQPFPALLDLPLGSD--AVKV 305
Query: 412 SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI---EGCVPRNVACGWWH 468
SCG+RHTAV+ G+++ WGW KYGQLG D + P +V + + V CG W+
Sbjct: 306 SCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDWPRRVEYFVDKQLQVKAVTCGPWN 365
Query: 469 TLLLAV 474
T + AV
Sbjct: 366 TYVYAV 371
Score = 72.4 bits (176), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 80/173 (46%), Gaps = 15/173 (8%)
Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
P L+ G+ +A VAAGG H++ +S+ G ++ WG+ GQL L +R + +
Sbjct: 201 PRLLEALQGLTMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTR-NLAEDGETVARE 259
Query: 272 ESSYGKDRSAALSRGSVNSEGPG-----------FRVP-GNYVKGIACGGRHSAVITDAG 319
+ +D S G V P +P G+ ++CG RH+AV+T G
Sbjct: 260 ATGLNEDGSQVKRTGRVEDGAPAPFIAVQPFPALLDLPLGSDAVKVSCGSRHTAVVTRTG 319
Query: 320 ALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG--IQIEGVAAGLWHTICISSD 370
L T+GWG YGQ G T P V + +Q++ V G W+T + +
Sbjct: 320 ELYTWGWGKYGQLGHEDTTSLDWPRRVEYFVDKQLQVKAVTCGPWNTYVYAVE 372
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 87/207 (42%), Gaps = 44/207 (21%)
Query: 53 GCGFAMAISDSRKLITWG--STDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
G A+ + + ++ +WG LG + + + E T A + AA GW H
Sbjct: 166 GAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLTMAEV--AAGGW-HS 222
Query: 111 VAVTEGGEVYTWGWKECVPSGRVFGDLSTGT---GLDKDVFERQSSFLTEQVSPRSQVSR 167
V V+E G++Y WGW E G L+ T D + R+++ L E SQV R
Sbjct: 223 VCVSETGDIYIWGWNES-------GQLALPTRNLAEDGETVAREATGLNED---GSQVKR 272
Query: 168 SSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVA 227
+ G E+G+ I++ FP L+ L G V+
Sbjct: 273 T-----------GRVEDGAPAPFIAV---------------QPFPALLDLPLGSDAVKVS 306
Query: 228 AGGRHTLALSDIGQVWGWGYGGEGQLG 254
G RHT ++ G+++ WG+G GQLG
Sbjct: 307 CGSRHTAVVTRTGELYTWGWGKYGQLG 333
>sp|Q9VR91|HERC2_DROME Probable E3 ubiquitin-protein ligase HERC2 OS=Drosophila melanogaster
GN=HERC2 PE=1 SV=3
Length = 4912
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 134/306 (43%), Gaps = 80/306 (26%)
Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
V+ V +GG+H LAL+ G+V+ WG G +G+LG G+R+ SY + +
Sbjct: 4136 VKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRM--------------SYDRPKL 4181
Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
+ G V IACG HSA IT +G +LT+G G YG+ G G ++D+
Sbjct: 4182 VE-------------HLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQ 4228
Query: 341 LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
L P V +LLG + +A +G T+CI+ D +V+++G +G+LG GG LP +
Sbjct: 4229 LRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKI 4288
Query: 399 DA--------------------------------------------------PSLENVHS 408
++ +L+
Sbjct: 4289 ESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKI 4348
Query: 409 KSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACGWW 467
S++ G+ H +D G+V+ WG N GQLG G V P V ++G V CG
Sbjct: 4349 ISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSA 4408
Query: 468 HTLLLA 473
HTL L+
Sbjct: 4409 HTLALS 4414
Score = 105 bits (261), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 122/255 (47%), Gaps = 36/255 (14%)
Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
V+ V +GG+H LAL+ G+V+ WG G +G+LG G+R ++ K R
Sbjct: 3073 VKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNR--------------TTLDKPRL 3118
Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
R ++ +ACG HSA I+ G L T+G G YG+ G G +
Sbjct: 3119 VEALR-------------AKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQ 3165
Query: 341 LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
L P V++L G ++ VA G T+ ++ DG V+++G FG+LG GG + P +
Sbjct: 3166 LKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEI 3225
Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCV 458
+ L + + CGA+ + + G+V+ WG Y +LG G D+++ I G
Sbjct: 3226 E--RLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGG--DQHVRKPQPIGGLR 3281
Query: 459 PR---NVACGWWHTL 470
R +VA G H L
Sbjct: 3282 GRRVIHVAVGALHCL 3296
Score = 93.2 bits (230), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 119/255 (46%), Gaps = 30/255 (11%)
Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
+R +A G + +S G+V+ G G G+LGLG V PH +P + R
Sbjct: 3019 LRPIHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLGV-THNVPLPHQLPVL-------RQ 3070
Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
+ + +V+S GG+H+ +T G + ++G G G+ G G+
Sbjct: 3071 YVVKKVAVHS-----------------GGKHALALTLDGKVFSWGEGEDGKLGHGNRTTL 3113
Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
P V +L +I VA G H+ ISS G++Y +G ++G+LG G + + P+L+ A
Sbjct: 3114 DKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTA 3173
Query: 401 PSLENVHSKSVSCGAR--HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGC 457
L V+CG+R T + +DG VF WG +G+LG G + P ++ + G
Sbjct: 3174 --LAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGI 3231
Query: 458 VPRNVACGWWHTLLL 472
+ CG +L L
Sbjct: 3232 GVVQIECGAQFSLAL 3246
Score = 92.0 bits (227), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 136/324 (41%), Gaps = 50/324 (15%)
Query: 101 VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
V +G HC+A+T GEVY WG E G L G + D L E ++
Sbjct: 4139 VAVNSGGKHCLALTTEGEVYAWGEGE-------DGKLGHGNRMSYD-----RPKLVEHLN 4186
Query: 161 PRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPG 220
S V+ + G++ SG ++ K GD P LV G
Sbjct: 4187 GMS-VADIACGSAHSAAITASGHV------LTWGKGRYGRLGHGDSEDQLRPKLVEALLG 4239
Query: 221 VRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
R +A +G TL ++D VW WG G G+LG G S +P Y +
Sbjct: 4240 YRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGG-----SDGCKLP-----YKIE 4289
Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
A L V + CG + S +T +GA+ T+G G + + G GS D
Sbjct: 4290 SLAGLG-----------------VVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVD 4332
Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
P V++L G +I +A G H + S G+VY +G N GQLG G A PRL+
Sbjct: 4333 HVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLV 4392
Query: 399 DAPSLENVHSKSVSCGARHTAVIA 422
A L+ H V+CG+ HT ++
Sbjct: 4393 AA--LQGKHIVKVTCGSAHTLALS 4414
Score = 86.7 bits (213), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 109/386 (28%), Positives = 152/386 (39%), Gaps = 73/386 (18%)
Query: 56 FAMAISDSRKLITWGSTDDL------GQSYV----TSGKHG-----EIPEPFPLPT-EAS 99
F+ IS R + G + L G+ Y T+G+ G +P P LP
Sbjct: 3012 FSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLRQY 3071
Query: 100 IVKAAA---GWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLT 156
+VK A G H +A+T G+V++WG E G L G D +
Sbjct: 3072 VVKKVAVHSGGKHALALTLDGKVFSWGEGE-------DGKLGHGNRTTLDKPRLVEALRA 3124
Query: 157 EQVSPRSQVSRSSGGTSSGTDGR--GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCL 214
+++ + S S SS + G GE G GD P L
Sbjct: 3125 KKIRDVACGSSHSAAISSQGELYTWGLGEYGRL--------------GHGDNTTQLKPKL 3170
Query: 215 VTLNPGVRIATVAAGGR--HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIE 272
VT G R+ VA G R TLAL++ G V+ WG G G+LG G
Sbjct: 3171 VTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG--------------- 3215
Query: 273 SSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQC 332
S G D + R S G V I CG + S +T AG + T+G G Y +
Sbjct: 3216 -SEGSDTPHEIERLS-----------GIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRL 3263
Query: 333 GQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAE 392
G G P + L G ++ VA G H + ++ G VYA+G N GQ G+G
Sbjct: 3264 GHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVN 3323
Query: 393 TLPRLLDAPSLENVHSKSVSCGARHT 418
P L+ L+ V V+CG+ H+
Sbjct: 3324 KKPALVIG--LDAVFVNRVACGSSHS 3347
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 116/238 (48%), Gaps = 45/238 (18%)
Query: 230 GRHTLALSDIGQVWGWGYGGEGQLGLG-SRIRMVSSPHPIPCIESSYGKDRSAALSRGSV 288
GRH LA+ + WG G + +LG G + R V + + AAL + V
Sbjct: 625 GRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPT--------------KIAALEQHCV 670
Query: 289 NSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS 348
S + CG +SA IT G LLT+G G Y + G G++DD P V +
Sbjct: 671 QS--------------VYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVA 716
Query: 349 LLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENV 406
L + VA +G H++ ++S+G V+A+G +G+LG G P L++ SL V
Sbjct: 717 LSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVE--SLPRV 774
Query: 407 HSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC-VPRNVA 463
+ V G++ + ++ +G+++ WG K LG +++R +++GC VPR V+
Sbjct: 775 --QRVFAGSQFSVALSSEGQLYTWG--KATCLG-HQLVER------SVQGCSVPRLVS 821
Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 107/229 (46%), Gaps = 36/229 (15%)
Query: 242 VWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPG 299
++GWG+ GQLG GSRI+ P PC E P
Sbjct: 4051 IYGWGHNHRGQLGGLEGSRIKT-----PTPC--------------------EALSLLRPV 4085
Query: 300 NYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA- 358
+A G + +T G L G+G G+ G G +D P + SL + ++ VA
Sbjct: 4086 Q----LAGGEQSLFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAV 4141
Query: 359 -AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARH 417
+G H + ++++G+VYA+G + G+LG G + P+L++ L + ++CG+ H
Sbjct: 4142 NSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVE--HLNGMSVADIACGSAH 4199
Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
+A I G V WG +YG+LG GD D+ P V + G ++ACG
Sbjct: 4200 SAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACG 4248
Score = 65.9 bits (159), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 135/348 (38%), Gaps = 66/348 (18%)
Query: 24 LPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDD--LGQSYVT 81
LP + P+L VV+ + G A+A++ K+ +WG +D LG T
Sbjct: 3061 LPHQLPVLRQYVVK---------KVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRT 3111
Query: 82 SGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGT 141
+ + E I A G +H A++ GE+YTWG E +G L G
Sbjct: 3112 TLDKPRLVEAL---RAKKIRDVACGSSHSAAISSQGELYTWGLGE-------YGRLGHGD 3161
Query: 142 GLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQT 197
+ + ++ +V + SR + + DG G G+ G L +
Sbjct: 3162 NTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFG------KLGRGG 3215
Query: 198 AESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS 257
+E S + E + G+ + + G + +LAL+ G+VW WG G +LG G
Sbjct: 3216 SEGSDTPHE--------IERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGG 3267
Query: 258 RIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITD 317
+ V P PI G R G V +A G H +TD
Sbjct: 3268 D-QHVRKPQPI------------------------GGLR--GRRVIHVAVGALHCLAVTD 3300
Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTI 365
AG + +G +GQ G G+T P V L + + VA G H+I
Sbjct: 3301 AGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSI 3348
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 63/136 (46%)
Query: 307 CGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC 366
C GRH I ++G G + G G T P +++L ++ V G ++
Sbjct: 623 CEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAA 682
Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGK 426
I+ G++ +G + +LG G +LP L+ A S V ++ G H+ + +G
Sbjct: 683 ITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGL 742
Query: 427 VFCWGWNKYGQLGLGD 442
VF WG YG+LG G+
Sbjct: 743 VFAWGDGDYGKLGNGN 758
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 92/221 (41%), Gaps = 33/221 (14%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
G+ + + P LV + VA +G H+LAL+ G V+ WG G G+LG G+
Sbjct: 703 GNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGN---C 759
Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
S PI +ES L R V+ + G + S ++ G L
Sbjct: 760 NGSLQPI-LVES---------LPR----------------VQRVFAGSQFSVALSSEGQL 793
Query: 322 LTFGWG--LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN 379
T+G L Q + S P VSSL +I VA + H + +SS G+V+ +G N
Sbjct: 794 YTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRN 853
Query: 380 QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAV 420
Q+ +E L R SL + ++C + + V
Sbjct: 854 DSQQICPASVSSEPLLRTPILVSLPTFPASGIACTSAQSLV 894
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 81/159 (50%), Gaps = 13/159 (8%)
Query: 319 GALLTFGWGL--YGQCG--QGSTDDELSP-NCVSSLLGIQIEGVAAGLWHTICISSDGDV 373
GA +GWG GQ G +GS +P +S L +Q+ G L+ ++ DG +
Sbjct: 4047 GASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLF---AVTPDGKL 4103
Query: 374 YAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSC--GARHTAVIADDGKVFCWG 431
+A G G+LG GG + +P LL SL++V K V+ G +H + +G+V+ WG
Sbjct: 4104 FATGYGSGGRLGVGGSDSWAIPTLLG--SLQHVFVKKVAVNSGGKHCLALTTEGEVYAWG 4161
Query: 432 WNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHT 469
+ G+LG G+ + + P V + G ++ACG H+
Sbjct: 4162 EGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHS 4200
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 52 GGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHG-EIPEPFPLPTEASIVKAAAGWAHC 110
G F++A+S +L TWG LG V G +P IV A AHC
Sbjct: 779 AGSQFSVALSSEGQLYTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHC 838
Query: 111 VAVTEGGEVYTWG 123
+A++ GEV+ WG
Sbjct: 839 LALSSSGEVFGWG 851
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 81/208 (38%), Gaps = 32/208 (15%)
Query: 53 GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGE-----IPEPFPLPTEASIVKAA--A 105
GC ++ AI+ L+TWG +Y G HG +P ++ +V A +
Sbjct: 676 GCSYSAAITCGGNLLTWGRG-----TYARLG-HGNSDDRSLPTLVVALSDHMVVDVALGS 729
Query: 106 GWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQV 165
G AH +A+T G V+ WG + +G L G S V +V
Sbjct: 730 GDAHSLALTSEGLVFAWGDGD-------YGKLGNGNC--------NGSLQPILVESLPRV 774
Query: 166 SRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIAT 225
R G+ G+ + + L Q E S G + P LV+ RI
Sbjct: 775 QRVFAGSQFSVALSSEGQLYTWGKATCLGHQLVERSVQG----CSVPRLVSSLQHKRIVD 830
Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQL 253
VA H LALS G+V+GWG Q+
Sbjct: 831 VAVSVAHCLALSSSGEVFGWGRNDSQQI 858
Score = 36.2 bits (82), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 51/115 (44%), Gaps = 11/115 (9%)
Query: 352 IQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSV 411
QI+ VA + +S +G +Y + +AE LP ++ + + S +
Sbjct: 572 FQIKQVACCETQMLILSQEGKLYTWR--------LAKPEAEPLP--MEEVAHDVFISIAG 621
Query: 412 SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
C RH I + + WG + +LG GD R +P+++ +E ++V CG
Sbjct: 622 HCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCG 676
Score = 34.3 bits (77), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 9/78 (11%)
Query: 50 CGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEA----SIVKAAA 105
CG G + I+D + +WG D Y G+ G P E+ +VK
Sbjct: 4247 CGSGDAQTLCITDDDNVWSWGDGD-----YGKLGRGGSDGCKLPYKIESLAGLGVVKVEC 4301
Query: 106 GWAHCVAVTEGGEVYTWG 123
G VA+T+ G VYTWG
Sbjct: 4302 GSQFSVALTKSGAVYTWG 4319
>sp|Q8BTU7|RCCD1_MOUSE RCC1 domain-containing protein 1 OS=Mus musculus GN=Rccd1 PE=2 SV=2
Length = 377
Score = 109 bits (273), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 116/247 (46%), Gaps = 43/247 (17%)
Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFR--VPGNYVKGIACGGRHSAVITDAGALLTFGW 326
P ES G +R V E P + P V+ + G H ++ AG + ++G
Sbjct: 128 PSRESRMGTLPLLPCARAYVTPEPPFCQPLAPELRVRQLELGAEHVLLLCAAGQVFSWGA 187
Query: 327 GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT 386
G +GQ G G+ + EL P + +L G+++ VAAG WH++C+S GD+Y +G N+ GQL
Sbjct: 188 GRHGQLGHGTLEAELEPRLLEALQGLRMAKVAAGGWHSVCLSETGDIYIWGWNESGQLAL 247
Query: 387 -----GGDQAET-------------------------------LPRLLDAPSLENVHSKS 410
++AE P LLD P + +
Sbjct: 248 PTRSGTENKAEREEATELNEDGLKEELAVADAGAPAHFIAIQPFPALLDLPLGSD--AVM 305
Query: 411 VSCGARHTAVIADDGKVFCWGWNKYGQLGLGD--VIDRNIPSQVTIEGCVP-RNVACGWW 467
SCG+RHTAV+ G+++ WGW KYGQLG D +DR + +E + R V CG W
Sbjct: 306 ASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSLDRPCCVEYFVERQLEVRAVTCGPW 365
Query: 468 HTLLLAV 474
+T + A+
Sbjct: 366 NTYVYAM 372
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 81/182 (44%), Gaps = 31/182 (17%)
Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
P L+ G+R+A VAAGG H++ LS+ G ++ WG+ GQL L +R
Sbjct: 204 PRLLEALQGLRMAKVAAGGWHSVCLSETGDIYIWGWNESGQLALPTR----------SGT 253
Query: 272 ESSYGKDRSAALSRGSVNSE-------GPGFRVP------------GNYVKGIACGGRHS 312
E+ ++ + L+ + E P + G+ +CG RH+
Sbjct: 254 ENKAEREEATELNEDGLKEELAVADAGAPAHFIAIQPFPALLDLPLGSDAVMASCGSRHT 313
Query: 313 AVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE--GVAAGLWHTICISSD 370
AV+T G L T+GWG YGQ G + P CV + Q+E V G W+T + +
Sbjct: 314 AVVTRTGELYTWGWGKYGQLGHKDSTSLDRPCCVEYFVERQLEVRAVTCGPWNTYVYAME 373
Query: 371 GD 372
D
Sbjct: 374 RD 375
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 77/186 (41%), Gaps = 51/186 (27%)
Query: 82 SGKHGEI------PEPFPLPTEA----SIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSG 131
+G+HG++ E P EA + K AAG H V ++E G++Y WGW E SG
Sbjct: 187 AGRHGQLGHGTLEAELEPRLLEALQGLRMAKVAAGGWHSVCLSETGDIYIWGWNE---SG 243
Query: 132 RVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRI 191
++ + T SGT+ + EE ++
Sbjct: 244 QL-----------------------------------ALPTRSGTENKAEREEATELNED 268
Query: 192 SLAKQTAESSSSGDENLSA---FPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYG 248
L ++ A + + + A FP L+ L G + G RHT ++ G+++ WG+G
Sbjct: 269 GLKEELAVADAGAPAHFIAIQPFPALLDLPLGSDAVMASCGSRHTAVVTRTGELYTWGWG 328
Query: 249 GEGQLG 254
GQLG
Sbjct: 329 KYGQLG 334
Score = 36.2 bits (82), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Query: 70 GSTDDLGQSYVTSGKHGEIPEPFP----LPTEASIVKAAAGWAHCVAVTEGGEVYTWGW 124
G ++L + + H +PFP LP + V A+ G H VT GE+YTWGW
Sbjct: 269 GLKEELAVADAGAPAHFIAIQPFPALLDLPLGSDAVMASCGSRHTAVVTRTGELYTWGW 327
>sp|Q4U2R1|HERC2_MOUSE E3 ubiquitin-protein ligase HERC2 OS=Mus musculus GN=Herc2 PE=1
SV=3
Length = 4836
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 145/292 (49%), Gaps = 31/292 (10%)
Query: 186 SKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAA--GGRHTLALSDIGQVW 243
+++R + L++ + + + ++ A P LV I +AA G H LAL+ G+V+
Sbjct: 460 AEKRFLILSRNGRVYTQAYNSDMLA-PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY 518
Query: 244 GWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVK 303
WG G G+LG G + P P + S++ ++ G +V
Sbjct: 519 SWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA------------------GKHVV 555
Query: 304 GIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA--AGL 361
IACG +SA IT G L T+G G YG+ G GS++DE P V+ L G+++ VA +G
Sbjct: 556 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGD 615
Query: 362 WHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
T+ ++ +G V+++G +G+LG GG P+L++ L+++ V CG++ + +
Sbjct: 616 AQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE--KLQDLDVIKVRCGSQFSIAL 673
Query: 422 ADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
DG+V+ WG +LG G P + ++G +VA G H L L
Sbjct: 674 TKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 725
Score = 100 bits (248), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 128/303 (42%), Gaps = 80/303 (26%)
Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
V+ V +GGRH AL+ G+V+ WG G +G+LG SR+ P I +++ +D
Sbjct: 3048 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRD-- 3104
Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
IACG HSA +T +G L T+G G YG+ G G +
Sbjct: 3105 ------------------------IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ 3140
Query: 341 LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
L P V LLG ++ VA G T+ ++ +G V+++G FG+LG GG + +P+ +
Sbjct: 3141 LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNI 3200
Query: 399 DAPSLE------------------------------------NVHSKS------------ 410
+ + + +VH +
Sbjct: 3201 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI 3260
Query: 411 --VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWW 467
V+ GA H + D G+V+ WG N +GQ G G P+ V +EG VACG
Sbjct: 3261 VHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3320
Query: 468 HTL 470
H++
Sbjct: 3321 HSV 3323
Score = 93.2 bits (230), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 144/365 (39%), Gaps = 82/365 (22%)
Query: 101 VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
V +G HC+A++ GEVY+WG E D G G ++ +R + E +
Sbjct: 4044 VAVNSGGKHCLALSSEGEVYSWGEAE---------DGKLGHG-NRSPCDRPR--VIESLR 4091
Query: 161 PRSQVSRSSGGTSSG-TDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
V ++GG S G K R L +E P LV
Sbjct: 4092 GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLK--------PKLVEALQ 4143
Query: 220 GVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
G R+ +A +G TL L+D VW WG G G+LG G G
Sbjct: 4144 GHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-------------------GS 4184
Query: 278 DRSAALSRGSVNSEGPGFRVPGNY-------VKGIACGGRHSAVITDAGALLTFGWGLYG 330
D G +VP V + CG + S +T +GA+ T+G G Y
Sbjct: 4185 D---------------GCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4229
Query: 331 QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
+ G GS D P V L G ++ +A G H +C + DG+VY +G N GQLG G
Sbjct: 4230 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTN 4289
Query: 391 AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
A PRL+ A L+ V+CG+ HT W +K G +P+
Sbjct: 4290 AIQRPRLVAA--LQGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPA 4331
Query: 451 QVTIE 455
QV +E
Sbjct: 4332 QVPME 4336
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 109/389 (28%), Positives = 163/389 (41%), Gaps = 60/389 (15%)
Query: 65 KLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGW 124
K+ WG +D Q G ++P + ++V+ A G AVT G+VY+ G
Sbjct: 2961 KVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGE 3019
Query: 125 KECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG---TSSGTDGR-- 179
+GR+ +S+GT RQ + L+ V + V+ SGG T+ DG+
Sbjct: 3020 ---ATNGRLGLGMSSGTV----PIPRQITALSSYVVKK--VAVHSGGRHATALTVDGKVF 3070
Query: 180 --GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS 237
G G++G K S + D+ P L+ RI +A G H+ AL+
Sbjct: 3071 SWGEGDDG---------KLGHFSRMNCDK-----PRLIEALKTKRIRDIACGSSHSAALT 3116
Query: 238 DIGQVWGWGYGGEGQLGLGS-----RIRMVSSPHPIPCIESSYGKDRSAALS---RGSVN 289
G+++ WG G G+LG G + +MV I+ + G + L+ G V
Sbjct: 3117 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 3176
Query: 290 SEGPG-------------------FRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG 330
S G G R+ G V I CG + S +T +G + T+G G Y
Sbjct: 3177 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 3236
Query: 331 QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
+ G GS P V L G +I VA G H + ++ G VYA+G N GQ G G
Sbjct: 3237 RLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTT 3296
Query: 391 AETLPRLLDAPSLENVHSKSVSCGARHTA 419
P L+ LE V+CG+ H+
Sbjct: 3297 VNRKPTLVQG--LEGQKITRVACGSSHSV 3323
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 123/276 (44%), Gaps = 50/276 (18%)
Query: 225 TVAAGGRHTLALSDIGQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAA 282
T++AGG G ++GWG+ GQLG G+++++ P PC + R
Sbjct: 3947 TLSAGGS--------GTIYGWGHNHRGQLGGIEGAKVKV-----PTPC--EALATLRPVQ 3991
Query: 283 LSRG-----SVNSEGPGF-------------------------RVPGNYVKGIAC--GGR 310
L G +V ++G + + ++K +A GG+
Sbjct: 3992 LIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGK 4051
Query: 311 HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
H ++ G + ++G G+ G G+ P + SL GI++ VAAG H+ C+++
Sbjct: 4052 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAA 4111
Query: 371 GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
GD+Y +G ++G+LG + + P+L++A V + G T + DD V+ W
Sbjct: 4112 GDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSW 4171
Query: 431 GWNKYGQLGLGDVIDRNIPSQV-TIEGCVPRNVACG 465
G YG+LG G +P ++ ++ G V CG
Sbjct: 4172 GDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECG 4207
Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 93/217 (42%), Gaps = 38/217 (17%)
Query: 202 SSGDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
SS DE A P LV G+++ VA +G TLA+++ GQVW WG G G+LG G
Sbjct: 588 SSEDE---AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG--- 641
Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITD 317
GS + P ++ V + CG + S +T
Sbjct: 642 --------------------------GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTK 675
Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
G + ++G G + G G+ + P + L G ++ VAAG H + ++ D +V+++G
Sbjct: 676 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
N Q T P P L++ H ++CG
Sbjct: 736 SND--QCQHFDTLRVTKPEPTALPGLDSKHIVGIACG 770
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 83/168 (49%), Gaps = 6/168 (3%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVA-- 358
V +A G + +T G + + G G+ G G + + P +++L ++ VA
Sbjct: 2995 VVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVH 3054
Query: 359 AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
+G H ++ DG V+++G G+LG PRL++A L+ + ++CG+ H+
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA--LKTKRIRDIACGSSHS 3112
Query: 419 AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACG 465
A + G+++ WG +YG+LG GD + P V + G VACG
Sbjct: 3113 AALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3160
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 123/333 (36%), Gaps = 87/333 (26%)
Query: 58 MAISDSRKLITWGSTDD--LGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTE 115
+A+S ++ +WG +D LG + + E +V AAG AH VT
Sbjct: 4054 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL---RGIEVVDVAAGGAHSACVTA 4110
Query: 116 GGEVYTWG-------------------WKECVPSGRVFGDLSTGTGLDKDVFERQSSFLT 156
G++YTWG E + RV D++ G+G + Q+ LT
Sbjct: 4111 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI-DIACGSG------DAQTLCLT 4163
Query: 157 EQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVT 216
+ S G G GRG G +G K P +
Sbjct: 4164 D-----DDTVWSWGDGDYGKLGRG-GSDGCK-----------------------VPMKID 4194
Query: 217 LNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYG 276
G+ + V G + ++AL+ G V+ WG G +LG GS V P + ++
Sbjct: 4195 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD-DHVRRPRQVQGLQ---- 4249
Query: 277 KDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGS 336
G V IA G H T+ G + T+G GQ G G+
Sbjct: 4250 ----------------------GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4287
Query: 337 TDDELSPNCVSSLLGIQIEGVAAGLWHTICISS 369
T+ P V++L G ++ VA G HT+ S+
Sbjct: 4288 TNAIQRPRLVAALQGKKVNRVACGSAHTLAWST 4320
Score = 41.2 bits (95), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 53 GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
G F++A++ S + TWG D LG S H P ++ A G HC
Sbjct: 4207 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRRPRQVQGLQGKKVIAIATGSLHC 4263
Query: 111 VAVTEGGEVYTWG 123
V TE GEVYTWG
Sbjct: 4264 VCCTEDGEVYTWG 4276
Score = 33.9 bits (76), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 9/78 (11%)
Query: 50 CGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHG----EIPEPFPLPTEASIVKAAA 105
CG G + ++D + +WG D Y G+ G ++P T +VK
Sbjct: 4152 CGSGDAQTLCLTDDDTVWSWGDGD-----YGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4206
Query: 106 GWAHCVAVTEGGEVYTWG 123
G VA+T+ G VYTWG
Sbjct: 4207 GSQFSVALTKSGAVYTWG 4224
Score = 33.1 bits (74), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 43/103 (41%), Gaps = 4/103 (3%)
Query: 352 IQIEGVAA-GLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
IQ EG+A+ G+ C + + G + Q A P+L+ + N+ +
Sbjct: 444 IQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSDMLA---PQLVQGLASRNIVKIA 500
Query: 411 VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT 453
H +A G+V+ WG G+LG GD + P ++
Sbjct: 501 AHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVIS 543
Score = 33.1 bits (74), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 9/78 (11%)
Query: 50 CGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHG----EIPEPFPLPTEASIVKAAA 105
CG G +A++++ ++ +WG D Y G+ G + P+ + ++K
Sbjct: 611 CGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKTPKLIEKLQDLDVIKVRC 665
Query: 106 GWAHCVAVTEGGEVYTWG 123
G +A+T+ G+VY+WG
Sbjct: 666 GSQFSIALTKDGQVYSWG 683
>sp|O95714|HERC2_HUMAN E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens GN=HERC2 PE=1
SV=2
Length = 4834
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 129/255 (50%), Gaps = 29/255 (11%)
Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
V+IA + G H LAL+ G+V+ WG G G+LG G + P P + S++ ++
Sbjct: 496 VKIAA-HSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV-----PLEEPKVISAFSGKQA 549
Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
G +V IACG +SA IT G L T+G G YG+ G GS++DE
Sbjct: 550 ------------------GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 591
Query: 341 LSPNCVSSLLGIQIEGVA--AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
P V+ L G+++ VA +G T+ ++ +G V+++G +G+LG GG P+L+
Sbjct: 592 AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLI 651
Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGC 457
+ L+++ V CG++ + + DG+V+ WG +LG G P + ++G
Sbjct: 652 E--KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGK 709
Query: 458 VPRNVACGWWHTLLL 472
+VA G H L L
Sbjct: 710 KVIDVAAGSTHCLAL 724
Score = 100 bits (248), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 128/303 (42%), Gaps = 80/303 (26%)
Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
V+ V +GGRH AL+ G+V+ WG G +G+LG SR+ P I +++ +D
Sbjct: 3047 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRD-- 3103
Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDE 340
IACG HSA +T +G L T+G G YG+ G G +
Sbjct: 3104 ------------------------IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ 3139
Query: 341 LSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
L P V LLG ++ VA G T+ ++ +G V+++G FG+LG GG + +P+ +
Sbjct: 3140 LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNI 3199
Query: 399 DAPSLE------------------------------------NVHSKS------------ 410
+ + + +VH +
Sbjct: 3200 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI 3259
Query: 411 --VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWW 467
V+ GA H + D G+V+ WG N +GQ G G P+ V +EG VACG
Sbjct: 3260 VHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3319
Query: 468 HTL 470
H++
Sbjct: 3320 HSV 3322
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 144/365 (39%), Gaps = 82/365 (22%)
Query: 101 VKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVS 160
V +G HC+A++ GEVY+WG E D G G ++ +R + E +
Sbjct: 4042 VAVNSGGKHCLALSSEGEVYSWGEAE---------DGKLGHG-NRSPCDRPR--VIESLR 4089
Query: 161 PRSQVSRSSGGTSSG-TDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNP 219
V ++GG S G K R L +E P LV
Sbjct: 4090 GIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLK--------PKLVEALQ 4141
Query: 220 GVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGK 277
G R+ +A +G TL L+D VW WG G G+LG G G
Sbjct: 4142 GHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-------------------GS 4182
Query: 278 DRSAALSRGSVNSEGPGFRVPGNY-------VKGIACGGRHSAVITDAGALLTFGWGLYG 330
D G +VP V + CG + S +T +GA+ T+G G Y
Sbjct: 4183 D---------------GCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4227
Query: 331 QCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQ 390
+ G GS D P V L G ++ +A G H +C + DG+VY +G N GQLG G
Sbjct: 4228 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTN 4287
Query: 391 AETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
A PRL+ A L+ V+CG+ HT W +K G +P+
Sbjct: 4288 AIQRPRLVAA--LQGKKVNRVACGSAHT---------LAWSTSKPASAG-------KLPA 4329
Query: 451 QVTIE 455
QV +E
Sbjct: 4330 QVPME 4334
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 111/400 (27%), Positives = 165/400 (41%), Gaps = 60/400 (15%)
Query: 53 GCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
G A + K+ WG +D Q G ++P + ++V+ A G A
Sbjct: 2948 AAGLESAATIRTKVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFA 3006
Query: 113 VTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGG- 171
VT G+VY G +GR+ +S+GT RQ + L+ V + V+ SGG
Sbjct: 3007 VTVEGKVYACGE---ATNGRLGLGISSGTV----PIPRQITALSSYVVKK--VAVHSGGR 3057
Query: 172 --TSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIAT 225
T+ DG+ G G++G K S + D+ P L+ RI
Sbjct: 3058 HATALTVDGKVFSWGEGDDG---------KLGHFSRMNCDK-----PRLIEALKTKRIRD 3103
Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS-----RIRMVSSPHPIPCIESSYGKDRS 280
+A G H+ AL+ G+++ WG G G+LG G + +MV I+ + G +
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3163
Query: 281 AALS---RGSVNSEGPG-------------------FRVPGNYVKGIACGGRHSAVITDA 318
L+ G V S G G R+ G V I CG + S +T +
Sbjct: 3164 QTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3223
Query: 319 GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
G + T+G G Y + G GS P V L G +I VA G H + ++ G VYA+G
Sbjct: 3224 GVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGD 3283
Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
N GQ G G P L+ LE V+CG+ H+
Sbjct: 3284 NDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHS 3321
Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 120/268 (44%), Gaps = 42/268 (15%)
Query: 233 TLALSDIGQVWGWGYGGEGQLG--LGSRIRMVSSPHPIPCIESSYGKDRSAALSRG---- 286
TL+ G ++GWG+ GQLG G+++++ P PC + R L G
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKV-----PTPC--EALATLRPVQLIGGEQTL 3997
Query: 287 -SVNSEGPGF-------------------------RVPGNYVKGIAC--GGRHSAVITDA 318
+V ++G + + ++K +A GG+H ++
Sbjct: 3998 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4057
Query: 319 GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
G + ++G G+ G G+ P + SL GI++ VAAG H+ C+++ GD+Y +G
Sbjct: 4058 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGK 4117
Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
++G+LG + + P+L++A V + G T + DD V+ WG YG+L
Sbjct: 4118 GRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKL 4177
Query: 439 GLGDVIDRNIPSQV-TIEGCVPRNVACG 465
G G +P ++ ++ G V CG
Sbjct: 4178 GRGGSDGCKVPMKIDSLTGLGVVKVECG 4205
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 92/217 (42%), Gaps = 38/217 (17%)
Query: 202 SSGDENLSAFPCLVTLNPGVRIATVA--AGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
SS DE A P LV G+++ VA +G TLA+++ GQVW WG G G+LG G
Sbjct: 587 SSEDE---AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG--- 640
Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF--RVPGNYVKGIACGGRHSAVITD 317
GS + P ++ V + CG + S +T
Sbjct: 641 --------------------------GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTK 674
Query: 318 AGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
G + ++G G + G G+ + P + L G ++ VAAG H + ++ D +V+++G
Sbjct: 675 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCG 414
N Q T P P L+ H ++CG
Sbjct: 735 SND--QCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 120/276 (43%), Gaps = 48/276 (17%)
Query: 205 DENLSAFPCLVTLNP---------GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG- 254
+E+L+A P L + N G I AAG + +V+ WG + QLG
Sbjct: 2917 EEDLAAVPFLASDNEEEEDEKGNSGSLIRKKAAGLESAATIR--TKVFVWGLNDKDQLGG 2974
Query: 255 -LGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSA 313
GS+I++ S+ + SA N V+ +A G +
Sbjct: 2975 LKGSKIKV-----------PSFSETLSAL-----------------NVVQ-VAGGSKSLF 3005
Query: 314 VITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVA--AGLWHTICISSD 370
+T G + G G+ G G + + P +++L ++ VA +G H ++ D
Sbjct: 3006 AVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVD 3065
Query: 371 GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
G V+++G G+LG PRL++A L+ + ++CG+ H+A + G+++ W
Sbjct: 3066 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEA--LKTKRIRDIACGSSHSAALTSSGELYTW 3123
Query: 431 GWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACG 465
G +YG+LG GD + P V + G VACG
Sbjct: 3124 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3159
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 121/310 (39%), Gaps = 47/310 (15%)
Query: 57 AMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEG 116
A A++ K+ +WG DD G+ S + + P I A G +H A+T
Sbjct: 3059 ATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 3117
Query: 117 GEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGT 176
GE+YTWG E GR G T L + + QV+ S+ +++ T G
Sbjct: 3118 GELYTWGLGE---YGR-LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173
Query: 177 DGR-GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLA 235
G G+ G R G E + + LN G + + G + +LA
Sbjct: 3174 VFSWGDGDFGKLGR-------------GGSEGCNIPQNIERLN-GQGVCQIECGAQFSLA 3219
Query: 236 LSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGF 295
L+ G VW WG G +LG GS + V P + G
Sbjct: 3220 LTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQVVE------------------------GL 3254
Query: 296 RVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE 355
R G + +A G H +TD+G + +G +GQ G G+T P V L G +I
Sbjct: 3255 R--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKIT 3312
Query: 356 GVAAGLWHTI 365
VA G H++
Sbjct: 3313 RVACGSSHSV 3322
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 123/333 (36%), Gaps = 87/333 (26%)
Query: 58 MAISDSRKLITWGSTDD--LGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTE 115
+A+S ++ +WG +D LG + + E +V AAG AH VT
Sbjct: 4052 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL---RGIEVVDVAAGGAHSACVTA 4108
Query: 116 GGEVYTWG-------------------WKECVPSGRVFGDLSTGTGLDKDVFERQSSFLT 156
G++YTWG E + RV D++ G+G + Q+ LT
Sbjct: 4109 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV-DIACGSG------DAQTLCLT 4161
Query: 157 EQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVT 216
+ S G G GRG G +G K P +
Sbjct: 4162 D-----DDTVWSWGDGDYGKLGRG-GSDGCK-----------------------VPMKID 4192
Query: 217 LNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYG 276
G+ + V G + ++AL+ G V+ WG G +LG GS V P + ++
Sbjct: 4193 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD-DHVRRPRQVQGLQ---- 4247
Query: 277 KDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGS 336
G V IA G H T+ G + T+G GQ G G+
Sbjct: 4248 ----------------------GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4285
Query: 337 TDDELSPNCVSSLLGIQIEGVAAGLWHTICISS 369
T+ P V++L G ++ VA G HT+ S+
Sbjct: 4286 TNAIQRPRLVAALQGKKVNRVACGSAHTLAWST 4318
Score = 41.2 bits (95), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 53 GCGFAMAISDSRKLITWGSTD--DLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
G F++A++ S + TWG D LG S H P ++ A G HC
Sbjct: 4205 GSQFSVALTKSGAVYTWGKGDYHRLGHG---SDDHVRRPRQVQGLQGKKVIAIATGSLHC 4261
Query: 111 VAVTEGGEVYTWG 123
V TE GEVYTWG
Sbjct: 4262 VCCTEDGEVYTWG 4274
Score = 33.5 bits (75), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 9/78 (11%)
Query: 50 CGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHG----EIPEPFPLPTEASIVKAAA 105
CG G + ++D + +WG D Y G+ G ++P T +VK
Sbjct: 4150 CGSGDAQTLCLTDDDTVWSWGDGD-----YGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4204
Query: 106 GWAHCVAVTEGGEVYTWG 123
G VA+T+ G VYTWG
Sbjct: 4205 GSQFSVALTKSGAVYTWG 4222
Score = 33.5 bits (75), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 9/78 (11%)
Query: 50 CGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHG----EIPEPFPLPTEASIVKAAA 105
CG G +A++++ ++ +WG D Y G+ G + P+ + +VK
Sbjct: 610 CGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 664
Query: 106 GWAHCVAVTEGGEVYTWG 123
G +A+T+ G+VY+WG
Sbjct: 665 GSQFSIALTKDGQVYSWG 682
Score = 33.1 bits (74), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 52/132 (39%), Gaps = 15/132 (11%)
Query: 323 TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFG 382
GWGL G + + P L + + +A + +S +G VY N
Sbjct: 425 VIGWGLIGWKYYANV---IGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN--- 478
Query: 383 QLGTGGDQAETL-PRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
++TL P+L+ + N+ + H +A G+V+ WG G+LG G
Sbjct: 479 --------SDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG 530
Query: 442 DVIDRNIPSQVT 453
D + P ++
Sbjct: 531 DTVPLEEPKVIS 542
>sp|Q92834|RPGR_HUMAN X-linked retinitis pigmentosa GTPase regulator OS=Homo sapiens
GN=RPGR PE=1 SV=2
Length = 1020
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 98/303 (32%), Positives = 143/303 (47%), Gaps = 45/303 (14%)
Query: 208 LSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR--------I 259
+S C+ L P ++ A G HTL ++ G V+ G EGQLGLG I
Sbjct: 75 ISKPTCVKALKPE-KVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVI 133
Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSV------NSEG------------PGFRVPGNY 301
+S H I + S G + SAAL+ NSEG P G
Sbjct: 134 SFFTSEHKIKQL--SAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKP 191
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST--DDELSPNCVSSLLGIQIEGVAA 359
V I+CG HSA +T G L FG G+ G + + +P VS + I+ VA
Sbjct: 192 VSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVIQ-VAC 250
Query: 360 GLWHTICISSDGDVYAFGGNQFGQLGTGGDQAET-LPRLLDAPSLENVHSKS---VSCGA 415
G HT+ ++ + VY FG QFGQLG G ET P++ +EN+ ++ +SCG
Sbjct: 251 GGEHTVVLTENA-VYTFGLGQFGQLGLGTFLFETSEPKV-----IENIRDQTISYISCGE 304
Query: 416 RHTAVIADDGKVFCWGWNKYGQLGLG--DVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
HTA+I D G ++ +G ++G+LGLG + + IP+ + + + VACG H ++
Sbjct: 305 NHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVF 364
Query: 473 AVP 475
A P
Sbjct: 365 AAP 367
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 93/170 (54%), Gaps = 2/170 (1%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
++CG HSAV+T L FG +GQ G GS P CV +L +++ A G HT
Sbjct: 40 LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHT 99
Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
+ + G+VYA GGN GQLG G + ++ + E+ K +S G+ +A + +D
Sbjct: 100 LVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEH-KIKQLSAGSNTSAALTED 158
Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAV 474
G++F WG N GQ+GL +V + +P QVTI G ++CG++H+ +
Sbjct: 159 GRLFMWGDNSEGQIGLKNVSNVCVPQQVTI-GKPVSWISCGYYHSAFVTT 207
Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 127/284 (44%), Gaps = 48/284 (16%)
Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIE------SSYGKDR 279
++ G H+ ++ +++ +G GQLGLGS+ +S P + ++ ++ G++
Sbjct: 40 LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSK-SAISKPTCVKALKPEKVKLAACGRNH 98
Query: 280 SAALSRGSV------NSEGP---------------GFRVPGNYVKGIACGGRHSAVITDA 318
+ + G N+EG F + +K ++ G SA +T+
Sbjct: 99 TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTED 158
Query: 319 GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
G L +G GQ G + + P V+ +G + ++ G +H+ +++DG++Y FG
Sbjct: 159 GRLFMWGDNSEGQIGLKNVSNVCVPQQVT--IGKPVSWISCGYYHSAFVTTDGELYVFGE 216
Query: 379 NQFGQLGTGGDQAETLPRLL----DAPSL-ENVHSK--SVSCGARHTAVIADDGKVFCWG 431
+ G+LG LP L P L + K V+CG HT V+ ++ V+ +G
Sbjct: 217 PENGKLG--------LPNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTENA-VYTFG 267
Query: 432 WNKYGQLGLGDVIDRNIPSQV--TIEGCVPRNVACGWWHTLLLA 473
++GQLGLG + +V I ++CG HT L+
Sbjct: 268 LGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALIT 311
Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 142/330 (43%), Gaps = 66/330 (20%)
Query: 103 AAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPR 162
AA G H + TEGG VY G G G L G +++ F S F +E
Sbjct: 92 AACGRNHTLVSTEGGNVYATG-------GNNEGQLGLGDTEERNTFHVISFFTSEH--KI 142
Query: 163 SQVSRSSGGTSSGT-DGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSA--FPCLV 215
Q+S S +++ T DGR G EG +I L +N+S P V
Sbjct: 143 KQLSAGSNTSAALTEDGRLFMWGDNSEG----QIGL------------KNVSNVCVPQQV 186
Query: 216 TLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSY 275
T+ G ++ ++ G H+ ++ G+++ +G G+LGL +++
Sbjct: 187 TI--GKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQL---------------L 229
Query: 276 GKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG 335
G R+ L +P ++ +ACGG H+ V+T+ A+ TFG G +GQ G G
Sbjct: 230 GNHRTPQLVS----------EIPEKVIQ-VACGGEHTVVLTE-NAVYTFGLGQFGQLGLG 277
Query: 336 STDDELS-PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAET- 393
+ E S P + ++ I ++ G HT I+ G +Y FG + G+LG G +
Sbjct: 278 TFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNH 337
Query: 394 -LPRLLDAPSLENVHSKSVSCGARHTAVIA 422
+P L + K V+CG H V A
Sbjct: 338 FIPTL--CSNFLRFIVKLVACGGCHMVVFA 365
>sp|Q8IVU3|HERC6_HUMAN Probable E3 ubiquitin-protein ligase HERC6 OS=Homo sapiens GN=HERC6
PE=2 SV=2
Length = 1022
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/256 (32%), Positives = 121/256 (47%), Gaps = 40/256 (15%)
Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
+ V+ G H+LA+ G+V+ WG G EGQLG+G + +P I +
Sbjct: 77 VDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTL----------- 125
Query: 283 LSRGSVNSEGPGFRVPGNYVKGI--ACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DD 339
N +K I +CG HS ++ + ++G +GQ G G
Sbjct: 126 -----------------NDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPS 168
Query: 340 ELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLD 399
+ SP V SL GI + VAAG H+ +S G + +G N GQL G +P +
Sbjct: 169 QASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSG---RNVPVQSN 225
Query: 400 AP----SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-I 454
P +L+N+ +SCG HTAV+ DGKVF +G N+ GQLG ++ P V I
Sbjct: 226 KPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERI 285
Query: 455 EGCVPRNVACGWWHTL 470
+G V + + CG +HTL
Sbjct: 286 DGLVSQ-IDCGSYHTL 300
Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 125/298 (41%), Gaps = 47/298 (15%)
Query: 83 GKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTG 142
+ GE+PEP + + G H +AV G V+ WG +G + G G
Sbjct: 60 AQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWG------AG---SEGQLGIG 110
Query: 143 LDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRI-SLAKQTAESS 201
K++ SF +P+ ++ + + G SK ++ S K +
Sbjct: 111 EFKEI-----SF-----TPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQL 160
Query: 202 SSGDENLS-AFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR 260
G E S A P V G+ +A VAAGG H+ ALS G +GWG GQL L R
Sbjct: 161 GLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNV 220
Query: 261 MVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA 320
V S P LS G++ + G V I+CG H+AV+T G
Sbjct: 221 PVQSNKP---------------LSVGALKNLG---------VVYISCGDAHTAVLTQDGK 256
Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFG 377
+ TFG GQ G T ++ P V + G+ + + G +HT+ + + G V +FG
Sbjct: 257 VFTFGDNRSGQLGYSPTPEKRGPQLVERIDGL-VSQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 66/125 (52%), Gaps = 4/125 (3%)
Query: 351 GIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
G ++ A+G H++ + ++ V + G N GQLG G Q LP + A LE +
Sbjct: 22 GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQA--LETLIVDL 79
Query: 411 VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNI-PSQV-TIEGCVPRNVACGWWH 468
VSCG H+ + G+VF WG GQLG+G+ + + P ++ T+ V+CG +H
Sbjct: 80 VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYH 139
Query: 469 TLLLA 473
+L L+
Sbjct: 140 SLALS 144
>sp|Q5RCZ7|RCBT2_PONAB RCC1 and BTB domain-containing protein 2 OS=Pongo abelii GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 102/176 (57%), Gaps = 7/176 (3%)
Query: 303 KGIAC----GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS-LLGIQIEGV 357
K IAC G H + T G + T+G Y Q G G+T+ L P +S+ L Q+ V
Sbjct: 98 KKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV 157
Query: 358 AAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARH 417
A G +H++ ++SDG+V+A+G N GQ+G+G + +PR + L+N +++CG
Sbjct: 158 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTG-CLQNKVVVTIACGQMC 216
Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
+ D G+V+ WG+N GQLGLG+ ++ P +V ++G + VACG+ HTL+L
Sbjct: 217 CMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 272
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 122/244 (50%), Gaps = 31/244 (12%)
Query: 214 LVTLNPGVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIE 272
L +LN G +IA ++ G G H + + G+V+ WG+ QLG G+ ++ +PC
Sbjct: 92 LDSLN-GKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT-----TNHGLVPCHI 145
Query: 273 SSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQC 332
S+ + V +ACG HS V+T G + +G+ GQ
Sbjct: 146 ST---------------------NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQV 184
Query: 333 GQGSTDDELSPNCVSSLLGIQIE-GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
G GST ++ P V+ L ++ +A G + + G+VY +G N GQLG G
Sbjct: 185 GSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGN 244
Query: 392 ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
+ P + A L+ + + V+CG HT V+ D+G+V+ WG N YGQLG G+ +++ P+
Sbjct: 245 QPTPCRVAA--LQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 302
Query: 452 VTIE 455
VT+E
Sbjct: 303 VTVE 306
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 109/231 (47%), Gaps = 30/231 (12%)
Query: 203 SGDENLSAFPCLVTLN-PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
+G N PC ++ N ++ VA G H+L L+ G+V+ WGY GQ+G GS +
Sbjct: 133 NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVN- 191
Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
PIP R + V V IACG + D G +
Sbjct: 192 ----QPIP--------RRVTGCLQNKV-------------VVTIACGQMCCMAVVDTGEV 226
Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
+G+ GQ G G++ ++ +P V++L GI+++ VA G HT+ ++ +G VYA+G N +
Sbjct: 227 YVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSY 286
Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
GQLGTG ++ P + + + +C + HT A G V+ WG
Sbjct: 287 GQLGTGNKSNQSYPTPVTVEKDRII--EIAACHSTHTSAAKTQGGHVYMWG 335
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 90/224 (40%), Gaps = 42/224 (18%)
Query: 65 KLITWG--STDDLGQSYVTSGKHGEIPEPFPLP-TEASIVKAAAGWAHCVAVTEGGEVYT 121
++ TWG + LG + HG +P + +++ A G H + +T GEV+
Sbjct: 119 EVFTWGHNAYSQLGNG---TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFA 175
Query: 122 WGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDG--- 178
WG+ G + +G+ +++ + R + L +V + T
Sbjct: 176 WGYNNS-------GQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYV 228
Query: 179 ---RGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLA 235
G+G+ G G+ PC V G+R+ VA G HTL
Sbjct: 229 WGYNGNGQLG-----------------LGNSGNQPTPCRVAALQGIRVQRVACGYAHTLV 271
Query: 236 LSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
L+D GQV+ WG GQLG G++ S P P+ + KDR
Sbjct: 272 LTDEGQVYAWGANSYGQLGTGNKSNQ-SYPTPV-----TVEKDR 309
Score = 52.8 bits (125), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 56/115 (48%), Gaps = 23/115 (20%)
Query: 370 DGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR----HTAVIADDG 425
+ +++ G N G LG G Q+ PR LD+ ++ K ++C + H + +G
Sbjct: 64 NDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS-----LNGKKIACLSYGSGPHIVLATTEG 118
Query: 426 KVFCWGWNKYGQLGLGDV--------IDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
+VF WG N Y QLG G I N+ ++ IE VACG +H+L+L
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIE------VACGSYHSLVL 167
Score = 39.7 bits (91), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 55/133 (41%), Gaps = 17/133 (12%)
Query: 14 VFMWGYL-PGALPQRSPILSPLVVRLP--LTVGSAWRDVCGGGCGFAMAISDSRKLITWG 70
VF WGY G + S + P+ R+ L CG C MA+ D+ ++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMC--CMAVVDTGEVYVWG 230
Query: 71 STDDLGQSYVTSGKHGEIPEPFPLPTEASI--VKAAAGWAHCVAVTEGGEVYTWGWKECV 128
G + G G P P + I + A G+AH + +T+ G+VY WG
Sbjct: 231 YN---GNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG----- 282
Query: 129 PSGRVFGDLSTGT 141
+G L TG
Sbjct: 283 --ANSYGQLGTGN 293
Score = 33.1 bits (74), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 53 GCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
CG+A + ++D ++ WG+ + GQ + + P P + + I AA H
Sbjct: 263 ACGYAHTLVLTDEGQVYAWGA-NSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHT 321
Query: 111 -VAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVF 148
A T+GG VY WG +C + L+ + D DVF
Sbjct: 322 SAAKTQGGHVYMWG--QCRGQSVILPHLTHFSCTD-DVF 357
>sp|O95199|RCBT2_HUMAN RCC1 and BTB domain-containing protein 2 OS=Homo sapiens GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 102/176 (57%), Gaps = 7/176 (3%)
Query: 303 KGIAC----GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS-LLGIQIEGV 357
K IAC G H + T G + T+G Y Q G G+T+ L P +S+ L Q+ V
Sbjct: 98 KKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV 157
Query: 358 AAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARH 417
A G +H++ ++SDG+V+A+G N GQ+G+G + +PR + L+N +++CG
Sbjct: 158 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTG-CLQNKVVVTIACGQMC 216
Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
+ D G+V+ WG+N GQLGLG+ ++ P +V ++G + VACG+ HTL+L
Sbjct: 217 CMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 272
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 122/244 (50%), Gaps = 31/244 (12%)
Query: 214 LVTLNPGVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIE 272
L +LN G +IA ++ G G H + + G+V+ WG+ QLG G+ ++ +PC
Sbjct: 92 LDSLN-GKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT-----TNHGLVPCHI 145
Query: 273 SSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQC 332
S+ + V +ACG HS V+T G + +G+ GQ
Sbjct: 146 ST---------------------NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQV 184
Query: 333 GQGSTDDELSPNCVSSLLGIQIE-GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
G GST ++ P V+ L ++ +A G + + G+VY +G N GQLG G
Sbjct: 185 GSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGN 244
Query: 392 ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
+ P + A L+ + + V+CG HT V+ D+G+V+ WG N YGQLG G+ +++ P+
Sbjct: 245 QPTPCRVAA--LQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 302
Query: 452 VTIE 455
VT+E
Sbjct: 303 VTVE 306
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 109/231 (47%), Gaps = 30/231 (12%)
Query: 203 SGDENLSAFPCLVTLN-PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
+G N PC ++ N ++ VA G H+L L+ G+V+ WGY GQ+G GS +
Sbjct: 133 NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVN- 191
Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
PIP R + V V IACG + D G +
Sbjct: 192 ----QPIP--------RRVTGCLQNKV-------------VVTIACGQMCCMAVVDTGEV 226
Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
+G+ GQ G G++ ++ +P V++L GI+++ VA G HT+ ++ +G VYA+G N +
Sbjct: 227 YVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSY 286
Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
GQLGTG ++ P + + + +C + HT A G V+ WG
Sbjct: 287 GQLGTGNKSNQSYPTPVTVEKDRII--EIAACHSTHTSAAKTQGGHVYMWG 335
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 90/224 (40%), Gaps = 42/224 (18%)
Query: 65 KLITWG--STDDLGQSYVTSGKHGEIPEPFPLP-TEASIVKAAAGWAHCVAVTEGGEVYT 121
++ TWG + LG + HG +P + +++ A G H + +T GEV+
Sbjct: 119 EVFTWGHNAYSQLGNG---TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFA 175
Query: 122 WGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDG--- 178
WG+ G + +G+ +++ + R + L +V + T
Sbjct: 176 WGYNNS-------GQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYV 228
Query: 179 ---RGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLA 235
G+G+ G G+ PC V G+R+ VA G HTL
Sbjct: 229 WGYNGNGQLG-----------------LGNSGNQPTPCRVAALQGIRVQRVACGYAHTLV 271
Query: 236 LSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
L+D GQV+ WG GQLG G++ S P P+ + KDR
Sbjct: 272 LTDEGQVYAWGANSYGQLGTGNKSNQ-SYPTPV-----TVEKDR 309
Score = 52.8 bits (125), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 56/115 (48%), Gaps = 23/115 (20%)
Query: 370 DGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR----HTAVIADDG 425
+ +++ G N G LG G Q+ PR LD+ ++ K ++C + H + +G
Sbjct: 64 NDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS-----LNGKKIACLSYGSGPHIVLATTEG 118
Query: 426 KVFCWGWNKYGQLGLGDV--------IDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
+VF WG N Y QLG G I N+ ++ IE VACG +H+L+L
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIE------VACGSYHSLVL 167
Score = 39.7 bits (91), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 55/133 (41%), Gaps = 17/133 (12%)
Query: 14 VFMWGYL-PGALPQRSPILSPLVVRLP--LTVGSAWRDVCGGGCGFAMAISDSRKLITWG 70
VF WGY G + S + P+ R+ L CG C MA+ D+ ++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMC--CMAVVDTGEVYVWG 230
Query: 71 STDDLGQSYVTSGKHGEIPEPFPLPTEASI--VKAAAGWAHCVAVTEGGEVYTWGWKECV 128
G + G G P P + I + A G+AH + +T+ G+VY WG
Sbjct: 231 YN---GNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG----- 282
Query: 129 PSGRVFGDLSTGT 141
+G L TG
Sbjct: 283 --ANSYGQLGTGN 293
Score = 33.1 bits (74), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 53 GCGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC 110
CG+A + ++D ++ WG+ + GQ + + P P + + I AA H
Sbjct: 263 ACGYAHTLVLTDEGQVYAWGA-NSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHT 321
Query: 111 -VAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVF 148
A T+GG VY WG +C + L+ + D DVF
Sbjct: 322 SAAKTQGGHVYMWG--QCRGQSVILPHLTHFSCTD-DVF 357
>sp|Q9R0X5|RPGR_MOUSE X-linked retinitis pigmentosa GTPase regulator OS=Mus musculus
GN=Rpgr PE=1 SV=2
Length = 1001
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 95/171 (55%), Gaps = 4/171 (2%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
++CG H+A++T L FG +GQ G GS + P C+ +L +++ A G HT
Sbjct: 40 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 99
Query: 365 ICISSDGDVYAFGGNQFGQLGTGG-DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
+ + G VYA GGN GQLG G D +T +++ + + K +S GA +A + +
Sbjct: 100 LVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTI--KQLSAGANTSAALTE 157
Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAV 474
DGK+F WG N GQ+GL D + IP +VT+ G ++CG++H+ + +
Sbjct: 158 DGKLFMWGDNSEGQIGLEDKSNVCIPHEVTV-GKPISWISCGYYHSAFVTM 207
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 139/298 (46%), Gaps = 45/298 (15%)
Query: 213 CLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR-----IRMVSSPHP 267
C+ L P ++ A G HTL +D G V+ G EGQLGLG + P
Sbjct: 80 CIKALKPE-KVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTP 138
Query: 268 IPCIES-SYGKDRSAALSRGSV------NSEG------------PGFRVPGNYVKGIACG 308
I+ S G + SAAL+ NSEG P G + I+CG
Sbjct: 139 ADTIKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISWISCG 198
Query: 309 GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVS--SLLGI--QIEGVAAGLWHT 364
HSA +T G L TFG G+ G +EL N S +LGI ++ VA G HT
Sbjct: 199 YYHSAFVTMDGELYTFGEPENGKLG---LPNELLMNHRSPQRVLGIPERVIQVACGGGHT 255
Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAET-LPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
+ ++ + VYAFG QFGQLG G ET P++++ +++ +SCG HTA++ +
Sbjct: 256 VVLT-EKVVYAFGLGQFGQLGLGTFLFETSEPKIIE--RIKDQKICHISCGENHTALMTE 312
Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC------VPRNVACGWWHTLLLAVP 475
G ++ +G ++G+LGLG N +Q C + +ACG H L+ A P
Sbjct: 313 LGLLYTFGDGRHGKLGLG---MENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVFATP 367
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 111/258 (43%), Gaps = 48/258 (18%)
Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
++ G HT ++ +++ +G GQLGLGS+ ++ CI++
Sbjct: 40 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKP----TCIKA------------ 83
Query: 286 GSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNC 345
+ VK ACG H+ V TD G + G GQ G G TDD + +
Sbjct: 84 -----------LKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQ 132
Query: 346 VSSLL-GIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLE 404
+ I+ ++AG + ++ DG ++ +G N GQ+G +P
Sbjct: 133 IVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIP--------- 183
Query: 405 NVHSKSV-------SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC 457
H +V SCG H+A + DG+++ +G + G+LGL + + N S + G
Sbjct: 184 --HEVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGI 241
Query: 458 VPR--NVACGWWHTLLLA 473
R VACG HT++L
Sbjct: 242 PERVIQVACGGGHTVVLT 259
Score = 65.9 bits (159), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 83/198 (41%), Gaps = 56/198 (28%)
Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
R+ VA GG HT+ L++ V+ +G G GQLGLG+ + S P I
Sbjct: 244 RVIQVACGGGHTVVLTE-KVVYAFGLGQFGQLGLGTFLFETSEPKIIE------------ 290
Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD--D 339
R+ + I+CG H+A++T+ G L TFG G +G+ G G + +
Sbjct: 291 --------------RIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTN 336
Query: 340 ELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL-- 397
+ P S+ L ++ +A G H + ++ PRL
Sbjct: 337 QFFPTLCSNFLRFAVQLIACGGCHMLVFAT-------------------------PRLGT 371
Query: 398 LDAPSLENVHSKSVSCGA 415
+D P E+V+ +S G+
Sbjct: 372 IDEPKFEDVYEPYISTGS 389
>sp|Q6P798|RCBT2_RAT RCC1 and BTB domain-containing protein 2 OS=Rattus norvegicus
GN=Rcbtb2 PE=2 SV=1
Length = 551
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 98/166 (59%), Gaps = 3/166 (1%)
Query: 309 GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS-LLGIQIEGVAAGLWHTICI 367
G H + T G + T+G Y Q G G+T+ L P +S+ L Q+ VA G +H++ +
Sbjct: 108 GPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVL 167
Query: 368 SSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKV 427
+SDG+V+A+G N GQ+G+G + +PR + L+N S++CG + + D G+V
Sbjct: 168 TSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTG-CLQNKVVMSIACGQMCSMAVVDTGEV 226
Query: 428 FCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
+ WG+N GQLGLG ++ P +V ++G + VACG+ HTL+L
Sbjct: 227 YVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 272
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 124/253 (49%), Gaps = 31/253 (12%)
Query: 220 GVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
G +IA+++ G G H + + G+V+ WG+ QLG G+ ++ +PC S+
Sbjct: 97 GKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGT-----TNHGLVPCHIST---- 147
Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
+ V +ACG HS V+T G + +G+ GQ G GST
Sbjct: 148 -----------------NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTA 190
Query: 339 DELSPNCVSSLLGIQI-EGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
++ P V+ L ++ +A G ++ + G+VY +G N GQLG G + P
Sbjct: 191 NQPIPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCR 250
Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE-G 456
+ A L+ + + V+CG HT V+ D+G+++ WG N YGQLG G+ +++ P+ V +E
Sbjct: 251 VAA--LQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVEKD 308
Query: 457 CVPRNVACGWWHT 469
+ AC HT
Sbjct: 309 RIIEIAACHSAHT 321
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 115/233 (49%), Gaps = 34/233 (14%)
Query: 203 SGDENLSAFPCLVTLN-PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
+G N PC ++ N ++ VA G H+L L+ G+V+ WGY GQ+G GS
Sbjct: 133 NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---- 188
Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
++ PIP R + V V IACG S + D G +
Sbjct: 189 -TANQPIP--------RRVTGCLQNKV-------------VMSIACGQMCSMAVVDTGEV 226
Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
+G+ GQ G GS+ ++ +P V++L GI+++ VA G HT+ ++ +G +YA+G N +
Sbjct: 227 YVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSY 286
Query: 382 GQLGTGG--DQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
GQLGTG +Q+ P +++ + + +C + HT A + G V+ WG
Sbjct: 287 GQLGTGNKSNQSYPTPVVVEKDRIIEI----AACHSAHTSAAKSQGGHVYMWG 335
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 55/111 (49%), Gaps = 15/111 (13%)
Query: 370 DGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFC 429
+ +++ G N G LG G Q+ PR LD+ + + + S S G H + DG+VF
Sbjct: 64 NDEIFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGP-HIVLATTDGEVFT 122
Query: 430 WGWNKYGQLGLGDV--------IDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
WG N Y QLG G I N+ ++ IE VACG +H+L+L
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIE------VACGSYHSLVL 167
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 106/258 (41%), Gaps = 57/258 (22%)
Query: 51 GGGCGFAMAISDSRKLITWG--STDDLGQSYVTSGKHGEIPEPFPLP-TEASIVKAAAGW 107
G G +A +D ++ TWG + LG + HG +P + +++ A G
Sbjct: 106 GSGPHIVLATTDG-EVFTWGHNAYSQLGNG---TTNHGLVPCHISTNLSNKQVIEVACGS 161
Query: 108 AHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSR 167
H + +T GEV+ WG+ G + +G+ ++ + R + L +V +S
Sbjct: 162 YHSLVLTSDGEVFAWGYNNS-------GQVGSGSTANQPIPRRVTGCLQNKVV----MSI 210
Query: 168 SSGGTSS------------GTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLV 215
+ G S G +G G G SSG++ PC V
Sbjct: 211 ACGQMCSMAVVDTGEVYVWGYNGNGQLGLG----------------SSGNQ---PTPCRV 251
Query: 216 TLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPC----- 270
G+R+ VA G HTL L+D GQ++ WG GQLG G++ S P P+
Sbjct: 252 AALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQ-SYPTPVVVEKDRI 310
Query: 271 --IESSYGKDRSAALSRG 286
I + + SAA S+G
Sbjct: 311 IEIAACHSAHTSAAKSQG 328
Score = 38.1 bits (87), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 55/133 (41%), Gaps = 17/133 (12%)
Query: 14 VFMWGYL-PGALPQRSPILSPLVVRLP--LTVGSAWRDVCGGGCGFAMAISDSRKLITWG 70
VF WGY G + S P+ R+ L CG C +MA+ D+ ++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMSIACGQMC--SMAVVDTGEVYVWG 230
Query: 71 STDDLGQSYVTSGKHGEIPEPFPLPTEASI--VKAAAGWAHCVAVTEGGEVYTWGWKECV 128
G + G G P P + I + A G+AH + +T+ G++Y WG
Sbjct: 231 YN---GNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWG----- 282
Query: 129 PSGRVFGDLSTGT 141
+G L TG
Sbjct: 283 --ANSYGQLGTGN 293
Score = 33.1 bits (74), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 8/114 (7%)
Query: 14 VFMWGYL-PGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFA--MAISDSRKLITWG 70
V++WGY G L S P R+ G + V CG+A + ++D ++ WG
Sbjct: 226 VYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRV---ACGYAHTLVLTDEGQIYAWG 282
Query: 71 STDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC-VAVTEGGEVYTWG 123
+ + GQ + + P P + + I AA AH A ++GG VY WG
Sbjct: 283 A-NSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKSQGGHVYMWG 335
>sp|Q15034|HERC3_HUMAN Probable E3 ubiquitin-protein ligase HERC3 OS=Homo sapiens GN=HERC3
PE=1 SV=1
Length = 1050
Score = 102 bits (255), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 140/308 (45%), Gaps = 51/308 (16%)
Query: 84 KHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGL 143
+ G PE + I+ A G +H +A+++ G++++WG +G G L T
Sbjct: 70 REGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG------AGSD-GQLGLMTTE 122
Query: 144 DKDVFERQSSFLTEQVSPRSQVSRSSGG---TSSGTDGRGSGEEGSKRRRISLAKQTAES 200
D R L ++++ ++ + S G + DG+ + ++ L K+
Sbjct: 123 DSVAVPR----LIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178
Query: 201 SSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIR 260
+S P V G+ +A VAAGG H+ ALS G V+GWG GQLGL
Sbjct: 179 AS---------PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE-- 227
Query: 261 MVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGA 320
KDR + + ++ V I+CG H+AV+T +G
Sbjct: 228 ----------------KDRESPCHVKLLRTQK---------VVYISCGEEHTAVLTKSGG 262
Query: 321 LLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTIC-ISSDGDVYAFGGN 379
+ TFG G GQ G S +DE++P V L+G ++ +A G HT+ + S G +YAFG
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322
Query: 380 QFGQLGTG 387
GQLGTG
Sbjct: 323 ARGQLGTG 330
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 112/251 (44%), Gaps = 30/251 (11%)
Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
I VA G H+LALSD GQ++ WG G +GQLGL + V+ P I
Sbjct: 85 HIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ------------ 132
Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST-DDE 340
++ + ++CG H + G T+G +GQ G G +
Sbjct: 133 --------------KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178
Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
SP V SL GI + VAAG H+ +S G V+ +G N GQLG ++ P +
Sbjct: 179 ASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKL 238
Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVP 459
+ V +SCG HTAV+ G VF +G GQLG + D P +V + G
Sbjct: 239 LRTQKV--VYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEV 296
Query: 460 RNVACGWWHTL 470
+ACG HTL
Sbjct: 297 TQIACGRQHTL 307
Score = 96.3 bits (238), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 118/255 (46%), Gaps = 38/255 (14%)
Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
+ VA GG H++ L + G+V+ G +GQLG R + P I +
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG---HEREGNKPEQIGALAD--------- 83
Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS 342
++ +ACG HS ++D G L ++G G GQ G +T+D ++
Sbjct: 84 -----------------QHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA 126
Query: 343 -PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD-QAETLPRLLDA 400
P + L I V+ G WH + +++DG + +G N GQLG G + ++ P+
Sbjct: 127 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQ--RV 184
Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI---EGC 457
SLE + V+ G H+ ++ G VF WG N GQLGL D DR P V + +
Sbjct: 185 RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKV 244
Query: 458 VPRNVACGWWHTLLL 472
V ++CG HT +L
Sbjct: 245 V--YISCGEEHTAVL 257
Score = 62.0 bits (149), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 144/369 (39%), Gaps = 79/369 (21%)
Query: 39 PLTVGS-AWRDVCGGGCG--FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLP 95
P +G+ A + + CG ++A+SD +L +WG+ D +T+ +P
Sbjct: 75 PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134
Query: 96 TEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFL 155
+ +I++ + G HC+A+ G+ +TWG G L GL K+
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWG-------KNSHGQL----GLGKE--------F 175
Query: 156 TEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLA-------KQTAESSSSGDENL 208
Q SP Q RS G G G+ +SL+ A DE
Sbjct: 176 PSQASP--QRVRSLEGIPLAQVAAG----GAHSFALSLSGAVFGWGMNNAGQLGLSDEKD 229
Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
PC V L ++ ++ G HT L+ G V+ +G G GQLG S M +P
Sbjct: 230 RESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDS---MNDEVNPR 286
Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHS-AVITDAGALLTFGWG 327
+E + G+ V IACG +H+ A + +G + FG G
Sbjct: 287 RVLE------------------------LMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322
Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW--HTICISSDGDVYAFGGNQFGQLG 385
GQ G G T + P+ V G W H+ +S+ D + + + Q+
Sbjct: 323 ARGQLGTGHTCNVKCPSPVK------------GYWAAHSGQLSARADRFKY--HIVKQIF 368
Query: 386 TGGDQAETL 394
+GGDQ L
Sbjct: 369 SGGDQTFVL 377
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 62/124 (50%), Gaps = 10/124 (8%)
Query: 354 IEGVAAGLWHTICISSDGDVYAFGGNQFGQLG--TGGDQAETLPRLLDAPSLENVHSKSV 411
++ VA G H++ + DG+VY G N GQLG G++ E + L D H V
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQIGALADQ------HIIHV 89
Query: 412 SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR-NIPSQV-TIEGCVPRNVACGWWHT 469
+CG H+ ++D G++F WG GQLGL D +P + + V+CG WH
Sbjct: 90 ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 470 LLLA 473
L LA
Sbjct: 150 LALA 153
>sp|Q9N1T2|RPGR_CANFA X-linked retinitis pigmentosa GTPase regulator OS=Canis familiaris
GN=RPGR PE=2 SV=1
Length = 1003
Score = 102 bits (255), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 92/170 (54%), Gaps = 2/170 (1%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
++CG H+AV+T L FG +GQ G GS P CV +L +++ A G HT
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT 99
Query: 365 ICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
+ + G VYA GGN GQLG G + + L+ + + K +S G+ +A + +D
Sbjct: 100 LVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQR-KIKQLSAGSNTSAALTED 158
Query: 425 GKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLAV 474
G++F WG N GQ+GL +V + +P QVT+ G ++CG++H+ +
Sbjct: 159 GELFMWGDNSEGQIGLENVTNVCVPQQVTV-GKPISWISCGYYHSAFVTT 207
Score = 102 bits (253), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 96/301 (31%), Positives = 144/301 (47%), Gaps = 51/301 (16%)
Query: 213 CLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR--------IRMVSS 264
C+ L P ++ A G HTL ++ G+V+ G EGQLGLG I +S
Sbjct: 80 CVKALKPE-KVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTS 138
Query: 265 PHPIPCIESSYGKDRSAALSRGSV------NSEG------------PGFRVPGNYVKGIA 306
I + S G + SAAL+ NSEG P G + I+
Sbjct: 139 QRKIKQL--SAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVGKPISWIS 196
Query: 307 CGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL-----SPNCVSSLLGIQIEGVAAGL 361
CG HSA +T G L TFG +CG+ ++L P V + G ++ VA G
Sbjct: 197 CGYYHSAFVTTEGQLYTFGEP---ECGKLGLPNQLLVNHRMPQPVPGIPGKVVQ-VACGG 252
Query: 362 WHTICISSDGDVYAFGGNQFGQLGTGGDQAET-LPRLLDAPSLENVHSKSVS---CGARH 417
HT+ ++ VY FG QFGQLG G ET +P+ ++E++ + +S CG H
Sbjct: 253 GHTVVLTEKA-VYTFGLGQFGQLGLGTFLFETSVPK-----AIEHIKDQKISFIACGENH 306
Query: 418 TAVIADDGKVFCWGWNKYGQLGLG--DVIDRNIPSQVT-IEGCVPRNVACGWWHTLLLAV 474
TA+I D G ++ +G ++G+LGLG + ++ IP+ + + + V+CG HTL+ A
Sbjct: 307 TALITDMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGGCHTLVFAT 366
Query: 475 P 475
P
Sbjct: 367 P 367
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 144/333 (43%), Gaps = 72/333 (21%)
Query: 103 AAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPR 162
AA G H + TEGG+VY G G G L G ++ F SF T Q +
Sbjct: 92 AACGRNHTLVSTEGGKVYAAG-------GNNEGQLGLGDTEERSTF-HLISFFTSQRKIK 143
Query: 163 SQVSRSSGGTSSGTDGR----GSGEEGSKRRRISLAKQTAESSSSGDENLSA--FPCLVT 216
+ S+ + DG G EG +I L EN++ P VT
Sbjct: 144 QLSAGSNTSAALTEDGELFMWGDNSEG----QIGL------------ENVTNVCVPQQVT 187
Query: 217 LNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI----RMVSSPHPIPCIE 272
+ G I+ ++ G H+ ++ GQ++ +G G+LGL +++ RM P P+P I
Sbjct: 188 V--GKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRM---PQPVPGI- 241
Query: 273 SSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQC 332
PG V+ +ACGG H+ V+T+ A+ TFG G +GQ
Sbjct: 242 -------------------------PGKVVQ-VACGGGHTVVLTEK-AVYTFGLGQFGQL 274
Query: 333 GQGSTDDELS-PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQA 391
G G+ E S P + + +I +A G HT I+ G +Y FG + G+LG G + +
Sbjct: 275 GLGTFLFETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLGLGLENS 334
Query: 392 --ETLPRLLDAPSLENVHSKSVSCGARHTAVIA 422
+ +P L + + VSCG HT V A
Sbjct: 335 TNQFIPTL--CSNFLRFIVQLVSCGGCHTLVFA 365
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 120/265 (45%), Gaps = 62/265 (23%)
Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSR 285
++ G HT ++ +++ +G GQLGLGS+ VS P C+++
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSK-STVSKP---TCVKA------------ 83
Query: 286 GSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNC 345
+ VK ACG H+ V T+ G + G GQ G G T++ + +
Sbjct: 84 -----------LKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHL 132
Query: 346 VSSLLGI-QIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLE 404
+S +I+ ++AG + ++ DG+++ +G N GQ+G LE
Sbjct: 133 ISFFTSQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIG-----------------LE 175
Query: 405 NVHSKSV-------------SCGARHTAVIADDGKVFCWGWNKYGQLGLGD--VIDRNIP 449
NV + V SCG H+A + +G+++ +G + G+LGL + +++ +P
Sbjct: 176 NVTNVCVPQQVTVGKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMP 235
Query: 450 SQVT-IEGCVPRNVACGWWHTLLLA 473
V I G V + VACG HT++L
Sbjct: 236 QPVPGIPGKVVQ-VACGGGHTVVLT 259
>sp|Q99LJ7|RCBT2_MOUSE RCC1 and BTB domain-containing protein 2 OS=Mus musculus GN=Rcbtb2
PE=2 SV=1
Length = 551
Score = 102 bits (254), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 98/166 (59%), Gaps = 3/166 (1%)
Query: 309 GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSS-LLGIQIEGVAAGLWHTICI 367
G H + T G + T+G Y Q G G+T+ L P +S+ L Q+ VA G +H++ +
Sbjct: 108 GPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVL 167
Query: 368 SSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKV 427
+SDG+V+A+G N GQ+G+G + +PR + L+N +++CG + + D G+V
Sbjct: 168 TSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTG-CLQNKVVMNIACGQMCSMAVVDTGEV 226
Query: 428 FCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
+ WG+N GQLGLG ++ P +V ++G + VACG+ HTL+L
Sbjct: 227 YVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 272
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 124/253 (49%), Gaps = 31/253 (12%)
Query: 220 GVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
G +IA+++ G G H + + G+V+ WG+ QLG G+ ++ +PC S+
Sbjct: 97 GKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGT-----TNHGLVPCHIST---- 147
Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
+ V +ACG HS V+T G + +G+ GQ G GST
Sbjct: 148 -----------------NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTA 190
Query: 339 DELSPNCVSSLLGIQI-EGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
++ P V+ L ++ +A G ++ + G+VY +G N GQLG G + P
Sbjct: 191 NQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCR 250
Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE-G 456
+ A L+ + + V+CG HT V+ D+G+++ WG N YGQLG G+ +++ P+ V +E
Sbjct: 251 VAA--LQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVEKD 308
Query: 457 CVPRNVACGWWHT 469
+ AC HT
Sbjct: 309 RIIEIAACHSAHT 321
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 114/233 (48%), Gaps = 34/233 (14%)
Query: 203 SGDENLSAFPCLVTLN-PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
+G N PC ++ N ++ VA G H+L L+ G+V+ WGY GQ+G GS
Sbjct: 133 NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---- 188
Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
++ PIP R + V V IACG S + D G +
Sbjct: 189 -TANQPIP--------RRVTGCLQNKV-------------VMNIACGQMCSMAVVDTGEV 226
Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
+G+ GQ G GS+ ++ +P V++L GI+++ VA G HT+ ++ +G +YA+G N +
Sbjct: 227 YVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSY 286
Query: 382 GQLGTGG--DQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
GQLGTG +Q+ P +++ + + +C + HT A G V+ WG
Sbjct: 287 GQLGTGNKSNQSYPTPVVVEKDRIIEI----AACHSAHTSAAKTQGGHVYMWG 335
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 55/111 (49%), Gaps = 15/111 (13%)
Query: 370 DGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFC 429
+ +++ G N G LG G Q+ PR LD+ + + + S S G H + DG+VF
Sbjct: 64 NDEIFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGP-HIVLATTDGEVFT 122
Query: 430 WGWNKYGQLGLGDV--------IDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
WG N Y QLG G I N+ ++ IE VACG +H+L+L
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIE------VACGSYHSLVL 167
Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 94/227 (41%), Gaps = 38/227 (16%)
Query: 51 GGGCGFAMAISDSRKLITWG--STDDLGQSYVTSGKHGEIPEPFPLP-TEASIVKAAAGW 107
G G +A +D ++ TWG + LG + HG +P + +++ A G
Sbjct: 106 GSGPHIVLATTDG-EVFTWGHNAYSQLGNG---TTNHGLVPCHISTNLSNKQVIEVACGS 161
Query: 108 AHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSR 167
H + +T GEV+ WG+ G + +G+ ++ + R + L +V +
Sbjct: 162 YHSLVLTSDGEVFAWGYNNS-------GQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQ 214
Query: 168 SSGGTSSGTDG------RGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGV 221
T G+G+ G SSG++ PC V G+
Sbjct: 215 MCSMAVVDTGEVYVWGYNGNGQLG--------------LGSSGNQ---PTPCRVAALQGI 257
Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
R+ VA G HTL L+D GQ++ WG GQLG G++ S P P+
Sbjct: 258 RVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQ-SYPTPV 303
Score = 38.5 bits (88), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 55/133 (41%), Gaps = 17/133 (12%)
Query: 14 VFMWGYL-PGALPQRSPILSPLVVRLP--LTVGSAWRDVCGGGCGFAMAISDSRKLITWG 70
VF WGY G + S P+ R+ L CG C +MA+ D+ ++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMC--SMAVVDTGEVYVWG 230
Query: 71 STDDLGQSYVTSGKHGEIPEPFPLPTEASI--VKAAAGWAHCVAVTEGGEVYTWGWKECV 128
G + G G P P + I + A G+AH + +T+ G++Y WG
Sbjct: 231 YN---GNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWG----- 282
Query: 129 PSGRVFGDLSTGT 141
+G L TG
Sbjct: 283 --ANSYGQLGTGN 293
Score = 35.0 bits (79), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 8/114 (7%)
Query: 14 VFMWGYL-PGALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFA--MAISDSRKLITWG 70
V++WGY G L S P R+ G + V CG+A + ++D ++ WG
Sbjct: 226 VYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRV---ACGYAHTLVLTDEGQIYAWG 282
Query: 71 STDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC-VAVTEGGEVYTWG 123
+ + GQ + + P P + + I AA AH A T+GG VY WG
Sbjct: 283 A-NSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 335
>sp|Q6NYE2|RCC2_DANRE Protein RCC2 homolog OS=Danio rerio GN=rcc2 PE=2 SV=1
Length = 495
Score = 100 bits (248), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 125/281 (44%), Gaps = 56/281 (19%)
Query: 221 VRIATVAAG--GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
V+++ V +G H+L ++ G++W WG +GQLG G R+ +P I
Sbjct: 121 VQVSCVVSGPCAAHSLIITTEGKLWSWGRNDKGQLGHGDTKRL-EAPKLI---------- 169
Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGS-T 337
EG G V + ACG H+ +T+ G + TFG GQ GQG+ T
Sbjct: 170 ------------EGLGEEV----IVAAACGRNHTLALTENGTVYTFGENKLGQLGQGNQT 213
Query: 338 DDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD-------- 389
D LSP + G I VA G ++ + G++Y+FG ++GQLG D
Sbjct: 214 DAVLSPATIQ-YNGQPIVKVACGAEFSMIVDCKGNLYSFGCPEYGQLGHNSDGKFIARAQ 272
Query: 390 ----QAETLPRLL----------DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKY 435
E +PR + + NV ++ V+CGA HT V+ +VF WG+ Y
Sbjct: 273 RIEFDCELIPRRVAIFIEKTKDGQVLPVPNVVARDVACGANHTLVLDSQKRVFSWGFGGY 332
Query: 436 GQLGLGDVIDRNIPSQVTIEGCVPR---NVACGWWHTLLLA 473
G+LG + D +P V + R + CG+ + L+
Sbjct: 333 GRLGHAEQKDEMVPRLVKLFDFPGRGATQIYCGYQCSFALS 373
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 100/388 (25%), Positives = 154/388 (39%), Gaps = 54/388 (13%)
Query: 49 VCGGGCG-FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGW 107
V G C ++ I+ KL +WG D GQ K E P+ E IV AA G
Sbjct: 126 VVSGPCAAHSLIITTEGKLWSWGRNDK-GQLGHGDTKRLEAPKLIEGLGEEVIVAAACGR 184
Query: 108 AHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQV------SP 161
H +A+TE G VYT+G + G L G D + + + + +
Sbjct: 185 NHTLALTENGTVYTFGENK-------LGQLGQGNQTDAVLSPATIQYNGQPIVKVACGAE 237
Query: 162 RSQVSRSSGGTSS-GTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAF-----PCLV 215
S + G S G G S + I+ A++ ++ F V
Sbjct: 238 FSMIVDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKTKDGQV 297
Query: 216 TLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSY 275
P V VA G HTL L +V+ WG+GG G+LG + +P
Sbjct: 298 LPVPNVVARDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQ-----KDEMVP------ 346
Query: 276 GKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG 335
R L F PG I CG + S +++ G L F WG+
Sbjct: 347 ---RLVKL-----------FDFPGRGATQIYCGYQCSFALSEMGGL--FFWGVTNT---- 386
Query: 336 STDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN-QFGQLGTGGDQAETL 394
S + + P V L G +I +A G +I +++D ++G + FG+LG G ++ ++
Sbjct: 387 SRESTMYPKAVQDLCGWKIRSLACGK-SSIIVAADDSTISWGPSPTFGELGYGDNKPKSS 445
Query: 395 PRLLDAPSLENVHSKSVSCGARHTAVIA 422
+ +L+ V+S+ V G H+ VIA
Sbjct: 446 TTAQEVKTLDGVYSEQVVMGYSHSLVIA 473
Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 94/233 (40%), Gaps = 51/233 (21%)
Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
I A G HTLAL++ G V+ +G GQLG G++ V SP I
Sbjct: 177 IVAAACGRNHTLALTENGTVYTFGENKLGQLGQGNQTDAVLSPATI-------------- 222
Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST----- 337
+ G + +ACG S ++ G L +FG YGQ G S
Sbjct: 223 -------------QYNGQPIVKVACGAEFSMIVDCKGNLYSFGCPEYGQLGHNSDGKFIA 269
Query: 338 -------DDELSPNCVSSLLGIQIEG------------VAAGLWHTICISSDGDVYAFGG 378
D EL P V+ + +G VA G HT+ + S V+++G
Sbjct: 270 RAQRIEFDCELIPRRVAIFIEKTKDGQVLPVPNVVARDVACGANHTLVLDSQKRVFSWGF 329
Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWG 431
+G+LG + E +PRL+ + + CG + + +++ G +F WG
Sbjct: 330 GGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYCGYQCSFALSEMGGLFFWG 382
>sp|Q8BK67|RCC2_MOUSE Protein RCC2 OS=Mus musculus GN=Rcc2 PE=2 SV=1
Length = 520
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 126/295 (42%), Gaps = 65/295 (22%)
Query: 190 RISLAKQTAESSSSGDENL---SAFPCLVTLNPGVRIATVAAG--GRHTLALSDIGQVWG 244
R + KQ A + G +NL + CL GVR+ TV +G H+L ++ G++W
Sbjct: 117 RKEVPKQQAAYRNLG-QNLWGPHRYGCL----SGVRVRTVVSGSCAAHSLLITTEGKLWS 171
Query: 245 WGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKG 304
WG +GQLG G R V +P I ALS ++
Sbjct: 172 WGRNEKGQLGHGDTKR-VEAPRLI------------EALSHEAIVL-------------- 204
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
ACG H+ +TD G++ FG GQ G G+ D + G I +A G +
Sbjct: 205 AACGRNHTLALTDTGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPITKMACGAEFS 264
Query: 365 ICISSDGDVYAFGGNQFGQLGTGGD------------QAETLPR-------------LLD 399
+ + G++Y+FG ++GQLG D E +PR +L
Sbjct: 265 MLMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILP 324
Query: 400 APSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI 454
P NV + V+CGA HT V+ +VF WG+ YG+LG + D +P V +
Sbjct: 325 VP---NVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKL 376
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 90/190 (47%), Gaps = 33/190 (17%)
Query: 311 HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
HS +IT G L ++G GQ G G T +P + +L I A G HT+ ++
Sbjct: 159 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDT 218
Query: 371 GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVS---CGARHTAVIADDGKV 427
G V+AFG N+ GQLG G+Q + +P +P+ + + ++ CGA + ++ G +
Sbjct: 219 GSVFAFGENKMGQLGL-GNQTDAVP----SPAQIMYNGQPITKMACGAEFSMLMDCKGNL 273
Query: 428 FCWGWNKYGQLGL---GDVIDRN---------IPSQVTI-------------EGCVPRNV 462
+ +G +YGQLG G I R +P +V I V R+V
Sbjct: 274 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 333
Query: 463 ACGWWHTLLL 472
ACG HTL+L
Sbjct: 334 ACGANHTLVL 343
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 130/325 (40%), Gaps = 64/325 (19%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
GD P L+ I A G HTLAL+D G V+ +G GQLGLG++ V
Sbjct: 183 GDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQTDAVP 242
Query: 264 SPHPI-----PCIESSYGKDRSAALS-RGSVNS--------------------------- 290
SP I P + + G + S + +G++ S
Sbjct: 243 SPAQIMYNGQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYD 302
Query: 291 ----------------EGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQ 334
+G VP V+ +ACG H+ V+ + ++G+G YG+ G
Sbjct: 303 CELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGH 362
Query: 335 GSTDDELSPNCVS--SLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAE 392
DE+ P V G + AG + +S G ++ +G + T
Sbjct: 363 AEQKDEMVPRLVKLFDFPGRGATQIYAGYTCSFAVSEVGGLFFWGATNTSREST------ 416
Query: 393 TLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWN-KYGQLGLGDVIDRNIPSQ 451
P+ + L +S++CG + + ++A D WG + +G+LG GD ++ +
Sbjct: 417 MYPKAVQ--DLCGWRIRSLACG-KSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAA 473
Query: 452 ---VTIEGCVPRNVACGWWHTLLLA 473
T++G VA G+ H+L++A
Sbjct: 474 QEVKTLDGIFSEQVAMGYSHSLVIA 498
Score = 39.3 bits (90), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 412 SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNV---ACGWWH 468
SC A H+ +I +GK++ WG N+ GQLG GD + + + IE + ACG H
Sbjct: 155 SCAA-HSLLITTEGKLWSWGRNEKGQLGHGDT--KRVEAPRLIEALSHEAIVLAACGRNH 211
Query: 469 TLLL 472
TL L
Sbjct: 212 TLAL 215
>sp|Q9P258|RCC2_HUMAN Protein RCC2 OS=Homo sapiens GN=RCC2 PE=1 SV=2
Length = 522
Score = 97.1 bits (240), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 125/295 (42%), Gaps = 65/295 (22%)
Query: 190 RISLAKQTAESSSSGDENL---SAFPCLVTLNPGVRIATVAAG--GRHTLALSDIGQVWG 244
R + KQ A + G +NL + CL GVR+ TV +G H+L ++ G++W
Sbjct: 119 RKEVPKQQAAYRNLG-QNLWGPHRYGCLA----GVRVRTVVSGSCAAHSLLITTEGKLWS 173
Query: 245 WGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKG 304
WG +GQLG G R V +P I EG V +
Sbjct: 174 WGRNEKGQLGHGDTKR-VEAPRLI----------------------EGLSHEV----IVS 206
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
ACG H+ +T+ G++ FG GQ G G+ D + G I +A G +
Sbjct: 207 AACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPITKMACGAEFS 266
Query: 365 ICISSDGDVYAFGGNQFGQLGTGGD------------QAETLPR-------------LLD 399
+ + G++Y+FG ++GQLG D E +PR +L
Sbjct: 267 MIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILP 326
Query: 400 APSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI 454
P NV + V+CGA HT V+ +VF WG+ YG+LG + D +P V +
Sbjct: 327 VP---NVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKL 378
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 89/190 (46%), Gaps = 33/190 (17%)
Query: 311 HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
HS +IT G L ++G GQ G G T +P + L I A G HT+ ++
Sbjct: 161 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTET 220
Query: 371 GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVS---CGARHTAVIADDGKV 427
G V+AFG N+ GQLG G+Q + +P +P+ + + ++ CGA + ++ G +
Sbjct: 221 GSVFAFGENKMGQLGL-GNQTDAVP----SPAQIMYNGQPITKMACGAEFSMIMDCKGNL 275
Query: 428 FCWGWNKYGQLGL---GDVIDRN---------IPSQVTI-------------EGCVPRNV 462
+ +G +YGQLG G I R +P +V I V R+V
Sbjct: 276 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 335
Query: 463 ACGWWHTLLL 472
ACG HTL+L
Sbjct: 336 ACGANHTLVL 345
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 98/252 (38%), Gaps = 51/252 (20%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
GD P L+ I + A G HTLAL++ G V+ +G GQLGLG++ V
Sbjct: 185 GDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAVP 244
Query: 264 SPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLT 323
SP I G + +ACG S ++ G L +
Sbjct: 245 SPAQI---------------------------MYNGQPITKMACGAEFSMIMDCKGNLYS 277
Query: 324 FGWGLYGQCGQGST------------DDELSPNCVSSLL------------GIQIEGVAA 359
FG YGQ G S D EL P V+ + + + VA
Sbjct: 278 FGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVAC 337
Query: 360 GLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
G HT+ + S V+++G +G+LG + E +PRL+ + + G +
Sbjct: 338 GANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTCSF 397
Query: 420 VIADDGKVFCWG 431
+++ G +F WG
Sbjct: 398 AVSEVGGLFFWG 409
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 96/392 (24%), Positives = 151/392 (38%), Gaps = 54/392 (13%)
Query: 47 RDVCGGGCG-FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAA 105
R V G C ++ I+ KL +WG + GQ K E P + IV AA
Sbjct: 151 RTVVSGSCAAHSLLITTEGKLWSWGRNEK-GQLGHGDTKRVEAPRLIEGLSHEVIVSAAC 209
Query: 106 GWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPR--- 162
G H +A+TE G V+ +G + G L G D Q + + ++
Sbjct: 210 GRNHTLALTETGSVFAFGENK-------MGQLGLGNQTDAVPSPAQIMYNGQPITKMACG 262
Query: 163 ---SQVSRSSGGTSS-GTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAF-----PC 213
S + G S G G S + I+ A++ ++ F
Sbjct: 263 AEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDG 322
Query: 214 LVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES 273
+ P V + VA G HTL L +V+ WG+GG G+LG + +P
Sbjct: 323 QILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQ-----KDEMVP---- 373
Query: 274 SYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCG 333
R L F PG I G S +++ G L F WG
Sbjct: 374 -----RLVKL-----------FDFPGRGASQIYAGYTCSFAVSEVGGL--FFWG----AT 411
Query: 334 QGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGN-QFGQLGTGGDQAE 392
S + + P V L G +I +A G +I +++D ++G + FG+LG G + +
Sbjct: 412 NTSRESTMYPKAVQDLCGWRIRSLACGK-SSIIVAADESTISWGPSPTFGELGYGDHKPK 470
Query: 393 TLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
+ + +L+ + S+ V+ G H+ VIA D
Sbjct: 471 SSTAAQEVKTLDGIFSEQVAMGYSHSLVIARD 502
Score = 41.6 bits (96), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 6/64 (9%)
Query: 412 SCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGC---VPRNVACGWWH 468
SC A H+ +I +GK++ WG N+ GQLG GD + + + IEG V + ACG H
Sbjct: 157 SCAA-HSLLITTEGKLWSWGRNEKGQLGHGDT--KRVEAPRLIEGLSHEVIVSAACGRNH 213
Query: 469 TLLL 472
TL L
Sbjct: 214 TLAL 217
>sp|Q8NDN9|RCBT1_HUMAN RCC1 and BTB domain-containing protein 1 OS=Homo sapiens GN=RCBTB1
PE=2 SV=1
Length = 531
Score = 96.7 bits (239), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 121/253 (47%), Gaps = 31/253 (12%)
Query: 220 GVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
G +I +++ G G H L ++ G V+ WG+ G QLG G+ + ++ P+ + K
Sbjct: 73 GKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIA---PVQVCTNLLIKQ 129
Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
V +ACG HS + G + +G+ GQ G GST
Sbjct: 130 -----------------------VVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTA 166
Query: 339 DELSPNCVSSLLGIQ-IEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
++ +P V++ L I+ + G+A G ++ + +G+VY +G N GQLG G + + P
Sbjct: 167 NQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTP-- 224
Query: 398 LDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEG- 456
+ +L +V + CG HT + D+G ++ WG N YGQLG G+ + P+ + +E
Sbjct: 225 VRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVEKE 284
Query: 457 CVPRNVACGWWHT 469
V AC HT
Sbjct: 285 RVVEIAACHSAHT 297
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 105/231 (45%), Gaps = 30/231 (12%)
Query: 203 SGDENLSAFPCLVTLNPGVR-IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
+G N P V N ++ + VA G H++AL+ G+V+ WGY GQ+G GS
Sbjct: 109 NGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGS---- 164
Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
++ P P R N + V GIACG S + D G +
Sbjct: 165 -TANQPTP---------------RKVTNC------LHIKRVVGIACGQTSSMAVLDNGEV 202
Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
+G+ GQ G G+ ++L+P V++L + + + G HT+ ++ +G +YA+G N +
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTY 262
Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT-AVIADDGKVFCWG 431
GQLGTG P + V + +C + HT A G V+ WG
Sbjct: 263 GQLGTGNKNNLLSPAHIMVEKERVV--EIAACHSAHTSAAKTQGGHVYMWG 311
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 74/154 (48%), Gaps = 4/154 (2%)
Query: 315 ITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW-HTICISSDGDV 373
+TD + FG G G L P + L G +I+ ++ G H + + DG V
Sbjct: 37 VTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVV 96
Query: 374 YAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWN 433
YA+G N + QLG G P + +L V+CG+ H+ +A DG+VF WG+N
Sbjct: 97 YAWGHNGYSQLGNGTTNQGIAPVQV-CTNLLIKQVVEVACGSHHSMALAADGEVFAWGYN 155
Query: 434 KYGQLGLGDVIDRNIPSQVTIEGCVPRNV--ACG 465
GQ+G G ++ P +VT + R V ACG
Sbjct: 156 NCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACG 189
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 73/179 (40%), Gaps = 42/179 (23%)
Query: 100 IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQV 159
+V+ A G H +A+ GEV+ WG+ C G + +G+ ++ + +T +
Sbjct: 130 VVEVACGSHHSMALAADGEVFAWGYNNC-------GQVGSGSTANQPTPRK----VTNCL 178
Query: 160 SPRSQVSRSSGGTSS------------GTDGRGSGEEGSKRRRISLAKQTAESSSSGDEN 207
+ V + G TSS G +G G G+ +++
Sbjct: 179 HIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLT--------------- 223
Query: 208 LSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPH 266
P V V + + G HTLAL+D G ++ WG GQLG G++ ++S H
Sbjct: 224 ----PVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAH 278
Score = 32.3 bits (72), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 51/112 (45%), Gaps = 10/112 (8%)
Query: 54 CGFA--MAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHC- 110
CG+A +A++D L WG+ + GQ + + P + E + AA AH
Sbjct: 240 CGYAHTLALTDEGLLYAWGA-NTYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTS 298
Query: 111 VAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPR 162
A T+GG VY WG +C + L+ + D DVF + F T VS R
Sbjct: 299 AAKTQGGHVYMWG--QCRGQSVILPHLTHFSCTD-DVF---ACFATPAVSWR 344
>sp|F2Z461|HERC6_MOUSE E3 ISG15--protein ligase Herc6 OS=Mus musculus GN=Herc6 PE=2 SV=1
Length = 1003
Score = 95.5 bits (236), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 117/252 (46%), Gaps = 28/252 (11%)
Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRS 280
+ + V+ G H++A+ G+V+ WG G EGQLG+G + P I +
Sbjct: 74 LHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKAL--------- 124
Query: 281 AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG-STDD 339
G + ++CG HS +++ G + ++G GQ G G ++
Sbjct: 125 -----------------AGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRS 167
Query: 340 ELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQA-ETLPRLL 398
+ P V SL GI + VAAG H+ +S G + +G N+ GQL G++ E + +
Sbjct: 168 QAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPH 227
Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCV 458
+L+N+ +SCG HTAV+ ++G+VF +G N GQL + P + G
Sbjct: 228 SIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGGR 287
Query: 459 PRNVACGWWHTL 470
+ C +HT+
Sbjct: 288 VSQIECASYHTI 299
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 98/234 (41%), Gaps = 41/234 (17%)
Query: 206 ENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSP 265
+ +S P + G++I V+ G H+LALS+ G V+ WG EGQLGLG R + P
Sbjct: 112 KEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIP 171
Query: 266 HPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFG 325
+ +E G + +A GG HS ++ G +FG
Sbjct: 172 QKVKSLE--------------------------GIPLAQVAAGGTHSFALSLTGT--SFG 203
Query: 326 W-----GLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQ 380
W G G + P+ + +L + + ++ G HT ++ +G V+ FGGN
Sbjct: 204 WGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNS 263
Query: 381 FGQLGTGGDQAETLPRLLDAPSLENV--HSKSVSCGARHT-AVIADDGKVFCWG 431
GQL + P+L +E + + C + HT A + G+V G
Sbjct: 264 SGQLQPSPRSGQRGPQL-----IEGIGGRVSQIECASYHTIAYVYTTGQVVSLG 312
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 72/125 (57%), Gaps = 4/125 (3%)
Query: 351 GIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKS 410
GI++ A+G H++ + S+ VY+ G N +GQLG DQ+ P + A L ++H
Sbjct: 21 GIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQA--LNDLHVDL 78
Query: 411 VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRN-IPSQV-TIEGCVPRNVACGWWH 468
VSCG H+ + GKVF WG GQLG+G+ + + +P+++ + G V+CG +H
Sbjct: 79 VSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYH 138
Query: 469 TLLLA 473
+L L+
Sbjct: 139 SLALS 143
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 86/172 (50%), Gaps = 5/172 (2%)
Query: 306 ACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTI 365
A G HS ++ + + G +GQ GQ P + +L + ++ V+ G H++
Sbjct: 28 ASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSV 87
Query: 366 CISSDGDVYAFGGNQFGQLGTGG-DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
+ G V+A+G GQLG G + +P + A L + VSCG H+ +++D
Sbjct: 88 AVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKA--LAGIKIIQVSCGHYHSLALSED 145
Query: 425 GKVFCWGWNKYGQLGLG-DVIDRNIPSQV-TIEGCVPRNVACGWWHTLLLAV 474
G VF WG N GQLGLG + + IP +V ++EG VA G H+ L++
Sbjct: 146 GHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSL 197
>sp|Q6NXM2|RCBT1_MOUSE RCC1 and BTB domain-containing protein 1 OS=Mus musculus GN=Rcbtb1
PE=2 SV=1
Length = 531
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 123/270 (45%), Gaps = 31/270 (11%)
Query: 203 SGDENLSAFPCLVTLNPGVRIATVAAG-GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
+GD + P + G +I +++ G G H L ++ G V+ WG+ G QLG G+ +
Sbjct: 56 TGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQG 115
Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
++ P+ + K V +ACG HS + G L
Sbjct: 116 IA---PVQVCTNLLIKQ-----------------------VIEVACGSHHSMALAADGEL 149
Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ-IEGVAAGLWHTICISSDGDVYAFGGNQ 380
+G+ GQ G GST ++ +P V++ L + + +A G ++ + G+VY +G N
Sbjct: 150 FAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNG 209
Query: 381 FGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL 440
GQLG G + + P + +L + + CG HT + D+G ++ WG N YGQLG
Sbjct: 210 NGQLGLGNNGNQLTP--VRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGT 267
Query: 441 GDVIDRNIPSQVTIEG-CVPRNVACGWWHT 469
G + P+Q+ +E V AC HT
Sbjct: 268 GSKNNLLSPTQIMVEKERVIEIAACHSTHT 297
Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 98/177 (55%), Gaps = 4/177 (2%)
Query: 299 GNYVKGIACG-GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSP-NCVSSLLGIQIEG 356
G +K ++ G G H + T+ G + +G Y Q G G+T+ ++P ++LL Q+
Sbjct: 73 GKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIE 132
Query: 357 VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR 416
VA G H++ +++DG+++A+G N GQ+G+G + PR + L +++CG
Sbjct: 133 VACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKV-TNCLHTKRVVNIACGQT 191
Query: 417 HTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT-IEGCVPRNVACGWWHTLLL 472
+ + D G+V+ WG+N GQLGLG+ ++ P +V + G + CG+ HTL L
Sbjct: 192 SSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLAL 248
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 109/235 (46%), Gaps = 38/235 (16%)
Query: 203 SGDENLSAFPCLVTLNPGVR-IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRM 261
+G N P V N ++ + VA G H++AL+ G+++ WGY GQ+G GS
Sbjct: 109 NGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGS---- 164
Query: 262 VSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGAL 321
++ P P R N + V IACG S + D+G +
Sbjct: 165 -TANQPTP---------------RKVTNC------LHTKRVVNIACGQTSSMAVLDSGEV 202
Query: 322 LTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQF 381
+G+ GQ G G+ ++L+P V++L G+ + + G HT+ ++ +G +YA+G N +
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTY 262
Query: 382 GQLGTGGDQAETLPRLLDAPSLENVHSKSV----SCGARHT-AVIADDGKVFCWG 431
GQLGTG L +P+ V + V +C + HT A G V+ WG
Sbjct: 263 GQLGTGSKNN------LLSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 77/161 (47%), Gaps = 18/161 (11%)
Query: 315 ITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLW-HTICISSDGDV 373
+TD + FG G G L P + +L G +I+ ++ G H + + DG V
Sbjct: 37 VTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVV 96
Query: 374 YAFGGNQFGQLGTGGDQAETLP-----RLLDAPSLENVHSKSVSCGARHTAVIADDGKVF 428
YA+G N + QLG G P LL +E V+CG+ H+ +A DG++F
Sbjct: 97 YAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIE------VACGSHHSMALAADGELF 150
Query: 429 CWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPR----NVACG 465
WG+N GQ+G G ++ P +VT C+ N+ACG
Sbjct: 151 AWGYNNCGQVGSGSTANQPTPRKVT--NCLHTKRVVNIACG 189
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 66/135 (48%), Gaps = 5/135 (3%)
Query: 341 LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA 400
LSP S+ + G +A I ++ + +V+ FG N LGTG +Q+ +P+ L+A
Sbjct: 13 LSPQEAGSIRKACVFGTSAN--EAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEA 70
Query: 401 PSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPR 460
+ + S S G H + +DG V+ WG N Y QLG G P QV + +
Sbjct: 71 LCGKKIKSLSYGSGP-HVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQ 129
Query: 461 --NVACGWWHTLLLA 473
VACG H++ LA
Sbjct: 130 VIEVACGSHHSMALA 144
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 74/176 (42%), Gaps = 42/176 (23%)
Query: 100 IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQV 159
+++ A G H +A+ GE++ WG+ C G + +G+ ++ + +T +
Sbjct: 130 VIEVACGSHHSMALAADGELFAWGYNNC-------GQVGSGSTANQPTPRK----VTNCL 178
Query: 160 SPRSQVSRSSGGTSS------------GTDGRGSGEEGSKRRRISLAKQTAESSSSGDEN 207
+ V+ + G TSS G +G G G+ +++
Sbjct: 179 HTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLT--------------- 223
Query: 208 LSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
P V G+ + + G HTLAL+D G ++ WG GQLG GS+ ++S
Sbjct: 224 ----PVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLS 275
>sp|P23800|RCC1_MESAU Regulator of chromosome condensation OS=Mesocricetus auratus
GN=RCC1 PE=1 SV=1
Length = 421
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 109/401 (27%), Positives = 169/401 (42%), Gaps = 55/401 (13%)
Query: 87 EIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKD 146
E +P +P +V+A AG H V + + G+VY++G C G L +D
Sbjct: 56 ERKKPALVPLLQDVVQAEAGGMHTVCLNQSGQVYSFG---CNDEG----------ALGRD 102
Query: 147 VFERQSSFLTEQVSPRSQVSRSSGGTSSGT----DGR----GSGEEGSKRRRISLAKQTA 198
S + +V + +V + S G S DGR GS + + I L +
Sbjct: 103 TSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGV--IGLLEPMK 160
Query: 199 ESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR 258
+S P V L+ + + VA+G H + L+ G ++ G G +GQLG R
Sbjct: 161 KS---------MVPVQVQLD--MPVVKVASGNDHLVMLTTDGDLYTLGCGEQGQLG---R 206
Query: 259 IRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDA 318
+ P G +R + S G RV + CG + I+
Sbjct: 207 V-----PELFANRGGRQGLERLLVPKCVLLKSRGSRGRV---RFQDAFCGAYLTFAISRE 258
Query: 319 GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE--GVAAGLWHTICISSDGDVYAF 376
G + FG Y Q G T P ++S G + G HTIC+ S+G Y+
Sbjct: 259 GHVYGFGLSNYHQLGTPGTASCFIPQNLTSFKNSTKSWVGFSGGQHHTICMDSEGKAYSL 318
Query: 377 GGNQFGQLGTG-GDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKY 435
G ++G+LG G G + +++P L+ + + SV+CGA ++ DG+VF WG
Sbjct: 319 GRAEYGRLGLGEGAEEKSIPTLISRLPVVS----SVACGASVGYAVSKDGRVFAWGMGTN 374
Query: 436 GQLGLGDVIDRNIPSQVT---IEGCVPRNVACGWWHTLLLA 473
QLG G D P ++T +E V V+ G HT+LL
Sbjct: 375 YQLGTGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLLV 415
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 102/414 (24%), Positives = 158/414 (38%), Gaps = 62/414 (14%)
Query: 23 ALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTS 82
L ++ P L PL+ + VC ++ S ++ ++G D+ TS
Sbjct: 54 VLERKKPALVPLLQDVVQAEAGGMHTVC---------LNQSGQVYSFGCNDEGALGRDTS 104
Query: 83 GKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTG 142
+ E+ P + + +V+ +AG +H A+TE G V+ WG F D + G
Sbjct: 105 VEGSEMV-PGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGS---------FRDNNGVIG 154
Query: 143 LDKDVFERQSSFLTEQVSPRSQVSRSSGGTSS----GTDGR----GSGEEGSKRRRISLA 194
L + + + S + QV V + + G TDG G GE+G R L
Sbjct: 155 LLEPM---KKSMVPVQVQLDMPVVKVASGNDHLVMLTTDGDLYTLGCGEQGQLGRVPELF 211
Query: 195 KQTAESSSSGDENLSAFPCLVTLNPG----VRIATVAAGGRHTLALSDIGQVWGWGYGGE 250
G E L C++ + G VR G T A+S G V+G+G
Sbjct: 212 AN--RGGRQGLERLLVPKCVLLKSRGSRGRVRFQDAFCGAYLTFAISREGHVYGFGLSNY 269
Query: 251 GQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGR 310
QLG +P C + F+ G + G
Sbjct: 270 HQLG---------TPGTASCF----------------IPQNLTSFKNSTKSWVGFSGGQH 304
Query: 311 HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
H+ + G + G YG+ G G +E S + S L + + VA G +S D
Sbjct: 305 HTICMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPV-VSSVACGASVGYAVSKD 363
Query: 371 GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
G V+A+G QLGTG D+ P + LEN +VS G +HT ++ D
Sbjct: 364 GRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLLVKD 417
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 109/270 (40%), Gaps = 57/270 (21%)
Query: 232 HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES------------------ 273
H ++ G V G G GQLGLG + P +P ++
Sbjct: 27 HRSHKTEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQDVVQAEAGGMHTVCLNQSG 86
Query: 274 ---SYGKDRSAALSRGSVNSEGPGFRVPGNY-----VKGIACGGRHSAVITDAGALLTFG 325
S+G + AL R + + EG VPG V ++ G H+A +T+ G + F
Sbjct: 87 QVYSFGCNDEGALGRDT-SVEGSEM-VPGKVELQEKVVQVSAGDSHTAALTEDGRV--FL 142
Query: 326 WGLYGQCGQGSTDDELSPNCVSSLLGIQIE------GVAAGLWHTICISSDGDVYAFGGN 379
WG + L P S++ +Q++ VA+G H + +++DGD+Y G
Sbjct: 143 WGSFRD--NNGVIGLLEP-MKKSMVPVQVQLDMPVVKVASGNDHLVMLTTDGDLYTLGCG 199
Query: 380 QFGQLG--------TGGDQAETLPRLLDAP--------SLENVHSKSVSCGARHTAVIAD 423
+ GQLG GG Q L RLL S V + CGA T I+
Sbjct: 200 EQGQLGRVPELFANRGGRQG--LERLLVPKCVLLKSRGSRGRVRFQDAFCGAYLTFAISR 257
Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVT 453
+G V+ +G + Y QLG IP +T
Sbjct: 258 EGHVYGFGLSNYHQLGTPGTASCFIPQNLT 287
>sp|Q8VE37|RCC1_MOUSE Regulator of chromosome condensation OS=Mus musculus GN=Rcc1 PE=1
SV=1
Length = 421
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 109/401 (27%), Positives = 169/401 (42%), Gaps = 55/401 (13%)
Query: 87 EIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKD 146
E +P +P +V+A AG H V +++ G+VY++G C G L +D
Sbjct: 56 ERKKPALVPLLQDVVQAEAGGMHTVCLSQSGQVYSFG---CNDEG----------ALGRD 102
Query: 147 VFERQSSFLTEQVSPRSQVSRSSGGTSSGT----DGR----GSGEEGSKRRRISLAKQTA 198
S + +V + +V + S G S DGR GS + + I L +
Sbjct: 103 TSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGV--IGLLEPMK 160
Query: 199 ESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR 258
+S P V L+ V VA+G H + L++ G ++ G G +GQLG R
Sbjct: 161 KS---------MVPVQVQLDAPV--VKVASGNDHLVMLTNDGDLYTLGCGEQGQLG---R 206
Query: 259 IRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDA 318
+ P G R + S G RV + CG + I+
Sbjct: 207 V-----PELFANRGGRQGLGRLLVPRCVLLKSRGTRGRV---RFQDAFCGAYFTFAISRE 258
Query: 319 GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE--GVAAGLWHTICISSDGDVYAF 376
G + FG Y Q G T P ++S G + G HT+C+ S+G Y+
Sbjct: 259 GHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSL 318
Query: 377 GGNQFGQLGTG-GDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKY 435
G ++G+LG G G + +++P L+ + + SV+CGA ++ DG+VF WG
Sbjct: 319 GRAEYGRLGLGEGAEEKSIPTLISRLPVVS----SVACGASVGYAVSKDGRVFAWGMGTN 374
Query: 436 GQLGLGDVIDRNIPSQVT---IEGCVPRNVACGWWHTLLLA 473
QLG G D P ++T +E V V+ G HT+LL
Sbjct: 375 YQLGTGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLLV 415
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 101/414 (24%), Positives = 157/414 (37%), Gaps = 62/414 (14%)
Query: 23 ALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTS 82
L ++ P L PL+ + VC +S S ++ ++G D+ TS
Sbjct: 54 VLERKKPALVPLLQDVVQAEAGGMHTVC---------LSQSGQVYSFGCNDEGALGRDTS 104
Query: 83 GKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTG 142
+ E+ P + + +V+ +AG +H A+TE G V+ WG F D + G
Sbjct: 105 VEGSEMV-PGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGS---------FRDNNGVIG 154
Query: 143 LDKDVFERQSSFLTEQVSPRSQVSRSSGGTSS----GTDGR----GSGEEGSKRRRISLA 194
L + + + S + QV + V + + G DG G GE+G R L
Sbjct: 155 LLEPM---KKSMVPVQVQLDAPVVKVASGNDHLVMLTNDGDLYTLGCGEQGQLGRVPELF 211
Query: 195 KQTAESSSSGDENLSAFPCLVTLNPG----VRIATVAAGGRHTLALSDIGQVWGWGYGGE 250
G L C++ + G VR G T A+S G V+G+G
Sbjct: 212 ANRGGRQGLG--RLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAISREGHVYGFGLSNY 269
Query: 251 GQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGR 310
QLG +P C + F+ G + G
Sbjct: 270 HQLG---------TPGTGSCF----------------IPQNLTSFKNSTKSWVGFSGGQH 304
Query: 311 HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
H+ + G + G YG+ G G +E S + S L + + VA G +S D
Sbjct: 305 HTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPV-VSSVACGASVGYAVSKD 363
Query: 371 GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
G V+A+G QLGTG D+ P + LEN +VS G +HT ++ D
Sbjct: 364 GRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLLVKD 417
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 110/268 (41%), Gaps = 53/268 (19%)
Query: 232 HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES------------------ 273
H ++ G V G G GQLGLG + P +P ++
Sbjct: 27 HRSHNTEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQDVVQAEAGGMHTVCLSQSG 86
Query: 274 ---SYGKDRSAALSRGSVNSEGPGFRVPGNY-----VKGIACGGRHSAVITDAGALLTFG 325
S+G + AL R + + EG VPG V ++ G H+A +T+ G + F
Sbjct: 87 QVYSFGCNDEGALGRDT-SVEGSEM-VPGKVELQEKVVQVSAGDSHTAALTEDGRV--FL 142
Query: 326 WGLYGQCGQGSTDDELSPNCVSSLLGIQIE------GVAAGLWHTICISSDGDVYAFGGN 379
WG + L P S++ +Q++ VA+G H + +++DGD+Y G
Sbjct: 143 WGSFRD--NNGVIGLLEP-MKKSMVPVQVQLDAPVVKVASGNDHLVMLTNDGDLYTLGCG 199
Query: 380 QFGQLG--------TGGDQA---ETLPR--LLDAPSLE-NVHSKSVSCGARHTAVIADDG 425
+ GQLG GG Q +PR LL + V + CGA T I+ +G
Sbjct: 200 EQGQLGRVPELFANRGGRQGLGRLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAISREG 259
Query: 426 KVFCWGWNKYGQLGLGDVIDRNIPSQVT 453
V+ +G + Y QLG IP +T
Sbjct: 260 HVYGFGLSNYHQLGTPGTGSCFIPQNLT 287
>sp|Q8SSY6|SPKUL_DICDI Bifunctional serine/threonine-protein kinase/NEDD4-like E3
ubiquitin-protein ligase OS=Dictyostelium discoideum
GN=DDB_G0276527 PE=3 SV=2
Length = 1887
Score = 89.0 bits (219), Expect = 8e-17, Method: Composition-based stats.
Identities = 70/251 (27%), Positives = 121/251 (48%), Gaps = 45/251 (17%)
Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR-IRMVSSPHPIPCIESSYGKDR 279
++I ++ G + ++D G ++ +G G G+LGLG + + M S+P + ++
Sbjct: 338 IKIVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQSLQ------- 390
Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGS-TD 338
G+++ ++ GG HS V+T+ G + +FG GQ G G ++
Sbjct: 391 -------------------GHFIIDMSSGGGHSLVLTNKGLVFSFGRNDQGQLGIGCFSN 431
Query: 339 DELSPNCVSSLLG--------IQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD- 389
+ P + I I V+AG +H+I IS + D YA+G + +G LGT D
Sbjct: 432 QQTIPKQIQWFQTSQQQQQQPINIIKVSAGGYHSIAISDNNDTYAWGRSDYGVLGTSIDV 491
Query: 390 QAE-TLPRLLDAPSL--ENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDR 446
Q + LP L+++ S+ +NV VS G +H ++ DG ++ WG N +LG D
Sbjct: 492 QGDRNLPVLINSNSVVVDNVKFIDVSSGFQHNVAMSIDGSLYSWGCNAGQRLGFKS--DE 549
Query: 447 NIPSQVTIEGC 457
N Q+T + C
Sbjct: 550 N---QLTPKKC 557
Score = 72.8 bits (177), Expect = 5e-12, Method: Composition-based stats.
Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 47/215 (21%)
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCV---SSLLGIQIEGVAAGL 361
I+ G HS+ ITD G L TFG GL G+ G G+ + SP V + +++ +A G
Sbjct: 193 ISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKPSLRVVSIANGG 252
Query: 362 WHTICISSDGDVYAFGGNQFGQLGTGG---DQAETLPRLLD------------------- 399
H++ ++ G VY++GGN QLG G +LP+L++
Sbjct: 253 KHSLALTICGKVYSWGGNDSCQLGLGNGSSSSYYSLPQLINFNISYNNNNNNNNNNSTNN 312
Query: 400 -------------------APSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL 440
+ + + +SCG +AVI D G +F +G +G+LGL
Sbjct: 313 NNNNNNDGAQQQFSLSQNSSSNNNKIKIVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGL 372
Query: 441 GD--VIDRNIPSQV-TIEGCVPRNVACGWWHTLLL 472
G+ ++ ++ P V +++G +++ G H+L+L
Sbjct: 373 GEQSLLMQSTPKLVQSLQGHFIIDMSSGGGHSLVL 407
Score = 47.0 bits (110), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 5/59 (8%)
Query: 204 GDENLSAF--PCLVTL---NPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS 257
G NL ++ P LV P +R+ ++A GG+H+LAL+ G+V+ WG QLGLG+
Sbjct: 221 GHGNLESYSSPKLVEFFQTKPSLRVVSIANGGKHSLALTICGKVYSWGGNDSCQLGLGN 279
Score = 32.3 bits (72), Expect = 8.1, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 411 VSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPR----NVACGW 466
+S GA H++ I D G ++ +G G+LG G++ + P V P ++A G
Sbjct: 193 ISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKPSLRVVSIANGG 252
Query: 467 WHTLLLAV 474
H+L L +
Sbjct: 253 KHSLALTI 260
>sp|P18754|RCC1_HUMAN Regulator of chromosome condensation OS=Homo sapiens GN=RCC1 PE=1
SV=1
Length = 421
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 108/398 (27%), Positives = 168/398 (42%), Gaps = 49/398 (12%)
Query: 87 EIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLST-GTGLDK 145
E +P + +V+A AG H V +++ G+VY++G C G + D S G+ +
Sbjct: 56 ERKKPALVSIPEDVVQAEAGGMHTVCLSKSGQVYSFG---CNDEGALGRDTSVEGSEMVP 112
Query: 146 DVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRR---ISLAKQTAESSS 202
E Q + QVS T++ TD GS R I L + +S
Sbjct: 113 GKVELQEKVV--------QVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKS-- 162
Query: 203 SGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMV 262
P V L+ V + VA+G H + L+ G ++ G G +GQLG R+
Sbjct: 163 -------MVPVQVQLD--VPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLG---RV--- 207
Query: 263 SSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALL 322
P G +R + S G V + CG + I+ G +
Sbjct: 208 --PELFANRGGRQGLERLLVPKCVMLKSRGSRGHV---RFQDAFCGAYFTFAISHEGHVY 262
Query: 323 TFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE--GVAAGLWHTICISSDGDVYAFGGNQ 380
FG Y Q G T+ P ++S G + G HT+C+ S+G Y+ G +
Sbjct: 263 GFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAE 322
Query: 381 FGQLGTG-GDQAETLPRLLD-APSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
+G+LG G G + +++P L+ P++ SV+CGA + DG+VF WG QL
Sbjct: 323 YGRLGLGEGAEEKSIPTLISRLPAVS-----SVACGASVGYAVTKDGRVFAWGMGTNYQL 377
Query: 439 GLGDVIDRNIPSQVT---IEGCVPRNVACGWWHTLLLA 473
G G D P ++ +E V +V+ G HT+LL
Sbjct: 378 GTGQDEDAWSPVEMMGKQLENRVVLSVSSGGQHTVLLV 415
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 102/406 (25%), Positives = 156/406 (38%), Gaps = 60/406 (14%)
Query: 32 SPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEP 91
P +V +P V A G + +S S ++ ++G D+ TS + E+ P
Sbjct: 59 KPALVSIPEDVVQAE-----AGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMV-P 112
Query: 92 FPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQ 151
+ + +V+ +AG +H A+T+ G V+ WG F D + GL + + +
Sbjct: 113 GKVELQEKVVQVSAGDSHTAALTDDGRVFLWGS---------FRDNNGVIGLLEPM---K 160
Query: 152 SSFLTEQVSPRSQVSRSSGGTSS----GTDGR----GSGEEGSKRRRISLAKQTAESSSS 203
S + QV V + + G DG G GE+G R L
Sbjct: 161 KSMVPVQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFAN--RGGRQ 218
Query: 204 GDENLSAFPCLVTLNPG----VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRI 259
G E L C++ + G VR G T A+S G V+G+G QLG
Sbjct: 219 GLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLG----- 273
Query: 260 RMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAG 319
P ES + + F+ G + G H+ + G
Sbjct: 274 --------TPGTESCF------------IPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEG 313
Query: 320 ALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGG 378
+ G YG+ G G +E S P +S L + VA G ++ DG V+A+G
Sbjct: 314 KAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAV--SSVACGASVGYAVTKDGRVFAWGM 371
Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
QLGTG D+ P + LEN SVS G +HT ++ D
Sbjct: 372 GTNYQLGTGQDEDAWSPVEMMGKQLENRVVLSVSSGGQHTVLLVKD 417
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 110/268 (41%), Gaps = 53/268 (19%)
Query: 232 HTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPH----PIPCIESSYGKDRSAALSR-G 286
H ++ G V G G GQLGLG + P P +++ G + LS+ G
Sbjct: 27 HRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDVVQAEAGGMHTVCLSKSG 86
Query: 287 SV-----NSEGPGFR---------VPGNY-----VKGIACGGRHSAVITDAGALLTFGWG 327
V N EG R VPG V ++ G H+A +TD G + F WG
Sbjct: 87 QVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRV--FLWG 144
Query: 328 LYGQCGQGSTDDELSPNCVSSLLGIQIE------GVAAGLWHTICISSDGDVYAFGGNQF 381
+ L P S++ +Q++ VA+G H + +++DGD+Y G +
Sbjct: 145 SFRD--NNGVIGLLEP-MKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQ 201
Query: 382 GQLG--------TGGDQAETLPRLLDAP--------SLENVHSKSVSCGARHTAVIADDG 425
GQLG GG Q L RLL S +V + CGA T I+ +G
Sbjct: 202 GQLGRVPELFANRGGRQG--LERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEG 259
Query: 426 KVFCWGWNKYGQLGLGDVIDRNIPSQVT 453
V+ +G + Y QLG IP +T
Sbjct: 260 HVYGFGLSNYHQLGTPGTESCFIPQNLT 287
>sp|Q5DX34|RPGRH_CAEEL X-linked retinitis pigmentosa GTPase regulator homolog
OS=Caenorhabditis elegans GN=glo-4 PE=1 SV=1
Length = 1392
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 98/217 (45%), Gaps = 33/217 (15%)
Query: 219 PGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKD 278
PG R +A G H L LS GQ+ WG GQ G+G R +++ H
Sbjct: 774 PGGRPRAIACGAEHILVLSSSGQLSAWGGNRFGQCGVGHSFR-IANLH------------ 820
Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQG--S 336
V+ + P ++ IACG HSA I G+L TFGWG++GQ G G +
Sbjct: 821 --------QVDGDWPA-------IEKIACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRN 865
Query: 337 TDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPR 396
++L P V+ L+ ++ +A G HT+ ++ G V G +GQ+G D +
Sbjct: 866 NSNQLVPTRVNGLI-CKVTQIACGRAHTVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFA- 923
Query: 397 LLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWN 433
L + + ++ H+ I +D +VF WG N
Sbjct: 924 -FTPLPLGPLRVRDIATHYYHSICITEDNRVFEWGRN 959
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 93/186 (50%), Gaps = 17/186 (9%)
Query: 295 FRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ- 353
PG + IACG H V++ +G L +G +GQCG G + +++L +
Sbjct: 771 LEYPGGRPRAIACGAEHILVLSSSGQLSAWGGNRFGQCGVGHSFR------IANLHQVDG 824
Query: 354 ----IEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGG--DQAETLPRLLDAPSLENVH 407
IE +A G +H+ I SDG ++ FG +GQLG GG + + +P ++ +
Sbjct: 825 DWPAIEKIACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVNGLICK--- 881
Query: 408 SKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIP-SQVTIEGCVPRNVACGW 466
++CG HT V+ D G+V G YGQ+G+ D I + + + + R++A +
Sbjct: 882 VTQIACGRAHTVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPLGPLRVRDIATHY 941
Query: 467 WHTLLL 472
+H++ +
Sbjct: 942 YHSICI 947
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 94/227 (41%), Gaps = 63/227 (27%)
Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIP------------ 269
++ +A G HT+ L+D G+V G G GQ+G+ I+ V + P+P
Sbjct: 881 KVTQIACGRAHTVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPLGPLRVRDIATH 940
Query: 270 -----CIESS-------------------YGKDRSAALS-----------------RGSV 288
CI K RSA L R ++
Sbjct: 941 YYHSICITEDNRVFEWGRNPQELKMRMFVMKKIRSAQLKNTEDPSSPSPSTNGSTPRVNL 1000
Query: 289 N------SEGPGFRVPGNYVKG----IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
N E G R +++ G +ACG HSA+IT G L T+G GL Q G G+ +
Sbjct: 1001 NLPAEIPREDLGLREVKHFLDGNIVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKN 1060
Query: 339 DELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLG 385
+ + P+ V G + V+ G HTI + DG V+A+G N FGQ G
Sbjct: 1061 ERMEPHQVFEPNGAKWVNVSLGNNHTIASTDDGSVFAWGKNDFGQCG 1107
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 392 ETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
+ LPR+L+ P ++++CGA H V++ G++ WG N++GQ G+G Q
Sbjct: 765 QHLPRVLEYPG---GRPRAIACGAEHILVLSSSGQLSAWGGNRFGQCGVGHSFRIANLHQ 821
Query: 452 VTIEGCVPRNVACGWWHTLLL 472
V + +ACG +H+ +
Sbjct: 822 VDGDWPAIEKIACGQFHSAFI 842
Score = 33.1 bits (74), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 28/55 (50%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR 258
G++N P V G + V+ G HT+A +D G V+ WG GQ G+ ++
Sbjct: 1057 GNKNERMEPHQVFEPNGAKWVNVSLGNNHTIASTDDGSVFAWGKNDFGQCGVLTK 1111
>sp|P25183|RCC1_XENLA Regulator of chromosome condensation OS=Xenopus laevis GN=rcc1 PE=2
SV=1
Length = 424
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 108/399 (27%), Positives = 168/399 (42%), Gaps = 54/399 (13%)
Query: 87 EIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKD 146
E +P + IV+AAAG H V + G +YT+G C G L +D
Sbjct: 62 ERKKPALVTLTEDIVQAAAGGMHTVCLGASGSIYTFG---CNDEG----------ALGRD 108
Query: 147 VFERQSSFLTEQVSPRSQVSRSSGGTSSGT----DGR----GSGEEGSKRRRISLAKQTA 198
E S +V +V + S G S DGR GS + + I L +
Sbjct: 109 TSEEGSEMQPGKVELAEKVVQVSAGDSHTAALTEDGRVFVFGSFRDNNGV--IGLLEPMK 166
Query: 199 ESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR 258
+S P V +N + +A+G H + L+ G ++ G G +GQLG R
Sbjct: 167 KS---------MVPVQVQIN--TPVIKIASGNDHLVLLTVDGDLYTSGCGEQGQLG---R 212
Query: 259 IRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDA 318
+ P G +R + ++G G RV + + + CG + ++
Sbjct: 213 V-----PERFTNRGGRKGLERLLVPQCIHLKAKGSG-RV---HFQDVFCGAYFTFAVSQE 263
Query: 319 GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIE--GVAAGLWHTICISSDGDVYAF 376
G + FG Y Q G +T +P ++S G + G HT+C+ S+G Y+
Sbjct: 264 GHVYGFGLSNYHQLGTKNTQACYAPQNLTSFKNSTKSWIGFSGGQHHTVCVDSEGKAYSL 323
Query: 377 GGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYG 436
G ++G+LG G+ AE P L ++ SV+ GA + ++ DG VF WG
Sbjct: 324 GRAEYGRLGL-GENAEEQSEPTPIPDLPKIN--SVASGASVSYAVSTDGCVFAWGMGTNL 380
Query: 437 QLGLGDVIDRNIPSQVT---IEGCVPRNVACGWWHTLLL 472
QLG G+ D P Q+T +E +V+ G HT+LL
Sbjct: 381 QLGTGEEEDVWSPEQMTGKHLEDREVLSVSSGGQHTVLL 419
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 99/410 (24%), Positives = 155/410 (37%), Gaps = 63/410 (15%)
Query: 24 LPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSG 83
+ ++ P L L + VC G G + T+G D+ TS
Sbjct: 61 MERKKPALVTLTEDIVQAAAGGMHTVCLGASG---------SIYTFGCNDEGALGRDTSE 111
Query: 84 KHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGL 143
+ E+ +P + +V+ +AG +H A+TE G V+ VFG G+
Sbjct: 112 EGSEM-QPGKVELAEKVVQVSAGDSHTAALTEDGRVF------------VFGSFRDNNGV 158
Query: 144 DKDVFERQSSFLTEQVSPRSQVSRSSGGTSS----GTDG----RGSGEEGSKRRRISLAK 195
+ + S + QV + V + + G DG G GE+G R +
Sbjct: 159 IGLLEPMKKSMVPVQVQINTPVIKIASGNDHLVLLTVDGDLYTSGCGEQGQLGRVPE--R 216
Query: 196 QTAESSSSGDENLSAFPCLVTLNPG---VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQ 252
T G E L C+ G V V G T A+S G V+G+G Q
Sbjct: 217 FTNRGGRKGLERLLVPQCIHLKAKGSGRVHFQDVFCGAYFTFAVSQEGHVYGFGLSNYHQ 276
Query: 253 LGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHS 312
LG K+ A + ++ S F+ G + G H+
Sbjct: 277 LGT---------------------KNTQACYAPQNLTS----FKNSTKSWIGFSGGQHHT 311
Query: 313 AVITDAGALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQIEGVAAGLWHTICISSDG 371
+ G + G YG+ G G +E S P + L +I VA+G + +S+DG
Sbjct: 312 VCVDSEGKAYSLGRAEYGRLGLGENAEEQSEPTPIPDL--PKINSVASGASVSYAVSTDG 369
Query: 372 DVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
V+A+G QLGTG ++ P + LE+ SVS G +HT ++
Sbjct: 370 CVFAWGMGTNLQLGTGEEEDVWSPEQMTGKHLEDREVLSVSSGGQHTVLL 419
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 103/263 (39%), Gaps = 60/263 (22%)
Query: 240 GQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES---------------------SYGKD 278
GQV G G GQLGLG I P + E ++G +
Sbjct: 41 GQVLTLGQGDVGQLGLGEDIMERKKPALVTLTEDIVQAAAGGMHTVCLGASGSIYTFGCN 100
Query: 279 RSAALSRGSVNSEG----PGFRVPGNYVKGIACGGRHSAVITDAGALLTFGW-----GLY 329
AL R + EG PG V ++ G H+A +T+ G + FG G+
Sbjct: 101 DEGALGR-DTSEEGSEMQPGKVELAEKVVQVSAGDSHTAALTEDGRVFVFGSFRDNNGVI 159
Query: 330 GQCGQGSTDDELSPNCVSSLLGIQIE------GVAAGLWHTICISSDGDVYAFGGNQFGQ 383
G L S++ +Q++ +A+G H + ++ DGD+Y G + GQ
Sbjct: 160 G----------LLEPMKKSMVPVQVQINTPVIKIASGNDHLVLLTVDGDLYTSGCGEQGQ 209
Query: 384 LG------TGGDQAETLPRL-------LDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
LG T + L RL L A VH + V CGA T ++ +G V+ +
Sbjct: 210 LGRVPERFTNRGGRKGLERLLVPQCIHLKAKGSGRVHFQDVFCGAYFTFAVSQEGHVYGF 269
Query: 431 GWNKYGQLGLGDVIDRNIPSQVT 453
G + Y QLG + P +T
Sbjct: 270 GLSNYHQLGTKNTQACYAPQNLT 292
>sp|Q52KW8|RCC2_XENLA Protein RCC2 homolog OS=Xenopus laevis GN=rcc2 PE=2 SV=1
Length = 513
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 123/295 (41%), Gaps = 65/295 (22%)
Query: 190 RISLAKQTAESSSSGDENL---SAFPCLVTLNPGVRIATVAAG--GRHTLALSDIGQVWG 244
R + KQ A + G +NL + CL GV++ +VA+G H+L ++ G++W
Sbjct: 110 RKEVPKQQAAYRNLG-QNLWGPHRYGCLT----GVQVRSVASGSCAAHSLLITVEGKLWS 164
Query: 245 WGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKG 304
WG +GQLG G I+ + P I ++ G
Sbjct: 165 WGRNDKGQLGHGD-IKRIDVPKLIESLK--------------------------GEVFVH 197
Query: 305 IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHT 364
ACG H+ +T+ G++ FG GQ G G+ D + G I VA G +
Sbjct: 198 AACGRNHTLALTENGSVYAFGENKMGQLGLGNKTDAVPSPAQILYNGQPITKVACGAEFS 257
Query: 365 ICISSDGDVYAFGGNQFGQLGTGGD------------QAETLPR-------------LLD 399
+ + G++Y+FG ++GQLG D E + R +L
Sbjct: 258 MIMDCKGNLYSFGCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIAIFIEKTKDGQILP 317
Query: 400 APSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI 454
P NV + ++CG H+ ++ +VF WG+ YG+LG + D +P V +
Sbjct: 318 VP---NVVVRDIACGINHSLILDSQKRVFSWGFGGYGRLGHSEQRDEMVPRLVKL 369
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 93/204 (45%), Gaps = 31/204 (15%)
Query: 297 VPGNYVKGIACG--GRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQI 354
+ G V+ +A G HS +IT G L ++G GQ G G P + SL G
Sbjct: 136 LTGVQVRSVASGSCAAHSLLITVEGKLWSWGRNDKGQLGHGDIKRIDVPKLIESLKGEVF 195
Query: 355 EGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHS-KSVSC 413
A G HT+ ++ +G VYAFG N+ GQLG G++ + +P A L N V+C
Sbjct: 196 VHAACGRNHTLALTENGSVYAFGENKMGQLGL-GNKTDAVPS--PAQILYNGQPITKVAC 252
Query: 414 GARHTAVIADDGKVFCWGWNKYGQLG------------------------LGDVIDRNIP 449
GA + ++ G ++ +G +YGQLG + I++
Sbjct: 253 GAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIAIFIEKTKD 312
Query: 450 SQVT-IEGCVPRNVACGWWHTLLL 472
Q+ + V R++ACG H+L+L
Sbjct: 313 GQILPVPNVVVRDIACGINHSLIL 336
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 98/252 (38%), Gaps = 51/252 (20%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
GD P L+ G A G HTLAL++ G V+ +G GQLGLG++ V
Sbjct: 176 GDIKRIDVPKLIESLKGEVFVHAACGRNHTLALTENGSVYAFGENKMGQLGLGNKTDAVP 235
Query: 264 SPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLT 323
SP I G + +ACG S ++ G L +
Sbjct: 236 SPAQI---------------------------LYNGQPITKVACGAEFSMIMDCKGNLYS 268
Query: 324 FGWGLYGQCGQGST------------DDELSPNCVSSLL------------GIQIEGVAA 359
FG YGQ G S D EL ++ + + + +A
Sbjct: 269 FGCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIAIFIEKTKDGQILPVPNVVVRDIAC 328
Query: 360 GLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTA 419
G+ H++ + S V+++G +G+LG + E +PRL+ + + GA +
Sbjct: 329 GINHSLILDSQKRVFSWGFGGYGRLGHSEQRDEMVPRLVKLFDFPGRGAAQIYAGATCSF 388
Query: 420 VIADDGKVFCWG 431
+++ G +F WG
Sbjct: 389 AVSEMGGLFFWG 400
Score = 69.3 bits (168), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 98/409 (23%), Positives = 157/409 (38%), Gaps = 68/409 (16%)
Query: 37 RLPLTVGSAWRDVCGGGCG-FAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLP 95
R G R V G C ++ I+ KL +WG D GQ K ++P+
Sbjct: 132 RYGCLTGVQVRSVASGSCAAHSLLITVEGKLWSWGRNDK-GQLGHGDIKRIDVPKLIESL 190
Query: 96 TEASIVKAAAGWAHCVAVTEGGEVYTWGWK-----------ECVPS-------GRVFGDL 137
V AA G H +A+TE G VY +G + VPS G+ +
Sbjct: 191 KGEVFVHAACGRNHTLALTENGSVYAFGENKMGQLGLGNKTDAVPSPAQILYNGQPITKV 250
Query: 138 STGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQT 197
+ G + + + + + Q+ +S G R + RRI++
Sbjct: 251 ACGAEFSM-IMDCKGNLYSFGCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIAI---F 306
Query: 198 AESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLG- 256
E + G + P V + +A G H+L L +V+ WG+GG G+LG
Sbjct: 307 IEKTKDGQ---------ILPVPNVVVRDIACGINHSLILDSQKRVFSWGFGGYGRLGHSE 357
Query: 257 SRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVIT 316
R MV P + F PG I G S ++
Sbjct: 358 QRDEMV--PRLVKL------------------------FDFPGRGAAQIYAGATCSFAVS 391
Query: 317 DAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAF 376
+ G L F WG S D + P V L G ++ +A G +I +++D ++
Sbjct: 392 EMGGL--FFWG----ATNTSRDSTMYPKAVQDLCGWKVRSLACGK-SSIIVAADESTISW 444
Query: 377 GGN-QFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
G + FG+LG G ++A++ + +L+ ++S V G HT V+A D
Sbjct: 445 GPSPTFGELGYGDNKAKSSTTAQEVKTLDGIYSDQVIMGNSHTLVVARD 493
>sp|P28745|RCC1_SCHPO Protein pim1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pim1 PE=1 SV=2
Length = 539
Score = 86.7 bits (213), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 145/369 (39%), Gaps = 68/369 (18%)
Query: 100 IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLS--TGTGLDKDVFERQSSFLTE 157
+V A G H A++ G VYTWG + GR+ D G +D D+ E S +
Sbjct: 110 VVDLAVGGMHSAALSHDGRVYTWGVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEG 169
Query: 158 QVSPR--SQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLV 215
+S ++V S T++ TD G+ R + + + + P
Sbjct: 170 ALSHLRVTKVICSDNLTAAITDNGCCFTWGTFRCSDGVLGYSDSQKRTAEPTQMRLP--- 226
Query: 216 TLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG--LGSRIRMVS-SPHPIPCIE 272
I +A G H +AL+ G+V+ WG G + QLG + R R+ +P P+
Sbjct: 227 ------EICQLATGTDHIIALTTTGKVYTWGNGQQFQLGRRMLERRRLQGLTPQPL---- 276
Query: 273 SSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQC 332
AL + + G HS I + G + +G + QC
Sbjct: 277 ---------ALKN----------------IISVGAGSYHSFAIDNKGRVYAWGLNITRQC 311
Query: 333 GQGSTDDE-----LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLG-- 385
G D+E P V +L G ++ + G HT+ + DG V A+G + QLG
Sbjct: 312 GIEVEDEEEGAVITKPTLVDALEGYNVKSITGGEHHTLALLEDGRVLAWGRDDRHQLGIP 371
Query: 386 ------------TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWN 433
G + + P ++ P L NV V CG H + DGKV+ WG
Sbjct: 372 DNALPETVVKDEKGNNYYLSTPTII--PGLTNV--IQVVCGTHHNLAVTSDGKVYSWGSA 427
Query: 434 KYGQLGLGD 442
+ ++G GD
Sbjct: 428 ENYEVGQGD 436
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 123/306 (40%), Gaps = 52/306 (16%)
Query: 55 GFAMAISDSRKLITWGS--TDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVA 112
AI+D+ TWG+ D Y S K P LP I + A G H +A
Sbjct: 184 NLTAAITDNGCCFTWGTFRCSDGVLGYSDSQKRTAEPTQMRLP---EICQLATGTDHIIA 240
Query: 113 VTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQS-SFLTEQ-VSPRSQVSRSSG 170
+T G+VYTWG +G+ F L + + ER+ LT Q ++ ++ +S +G
Sbjct: 241 LTTTGKVYTWG------NGQQFQ-------LGRRMLERRRLQGLTPQPLALKNIISVGAG 287
Query: 171 GTSS-GTDGRGSGEEGSKRRRI-----SLAKQTAESSSSGDEN-LSAFPCLVTLNPGVRI 223
S D +G R+ ++ +Q +E + P LV G +
Sbjct: 288 SYHSFAIDNKG---------RVYAWGLNITRQCGIEVEDEEEGAVITKPTLVDALEGYNV 338
Query: 224 ATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAAL 283
++ G HTLAL + G+V WG QLG+ P + + KD
Sbjct: 339 KSITGGEHHTLALLEDGRVLAWGRDDRHQLGI-----------PDNALPETVVKDEKGNN 387
Query: 284 SRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS- 342
S + PG V + CG H+ +T G + ++G + GQG D++++
Sbjct: 388 YYLSTPTIIPGL----TNVIQVVCGTHHNLAVTSDGKVYSWGSAENYEVGQGDNDEDVAV 443
Query: 343 PNCVSS 348
P V S
Sbjct: 444 PTLVRS 449
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 90/221 (40%), Gaps = 27/221 (12%)
Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
ES K+ + R V+S RVPG+ K I + + T+ + FG G +
Sbjct: 28 ESDVMKNGKKPVKRAKVSSLPKPVRVPGS-AKRI---NKIPELPTERLNVYVFGSGSMNE 83
Query: 332 CGQGSTDDEL----SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT- 386
G G + ++ N + S + + +A G H+ +S DG VY +G N LG
Sbjct: 84 LGMGEEEMDVVYRPRLNPILSTDKVGVVDLAVGGMHSAALSHDGRVYTWGVNDDYALGRL 143
Query: 387 GGDQAETLPRLLDAPSLENVHSK-----------SVSCGARHTAVIADDGKVFCWGWNK- 434
DQ + +D LE SK V C TA I D+G F WG +
Sbjct: 144 TKDQKDENGDKVDNDLLEGTPSKVEGALSHLRVTKVICSDNLTAAITDNGCCFTWGTFRC 203
Query: 435 -YGQLGLGDVIDRNI-PSQVTI-EGCVPRNVACGWWHTLLL 472
G LG D R P+Q+ + E C +A G H + L
Sbjct: 204 SDGVLGYSDSQKRTAEPTQMRLPEIC---QLATGTDHIIAL 241
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 91/240 (37%), Gaps = 22/240 (9%)
Query: 33 PLVVRLPLTVGSAWRDVC--GGGCGFAMAISDSRKLITWGSTDD--LGQSYVTSGK-HGE 87
P +RLP ++C G +A++ + K+ TWG+ LG+ + + G
Sbjct: 220 PTQMRLP--------EICQLATGTDHIIALTTTGKVYTWGNGQQFQLGRRMLERRRLQGL 271
Query: 88 IPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDV 147
P+P L +I+ AG H A+ G VY WG G D G + K
Sbjct: 272 TPQPLAL---KNIISVGAGSYHSFAIDNKGRVYAWGLNITRQCGIEVEDEEEGAVITKPT 328
Query: 148 FERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDEN 207
E + +S + DGR R ++ + + DE
Sbjct: 329 L----VDALEGYNVKSITGGEHHTLALLEDGRVLAWGRDDRHQLGIPDNALPETVVKDEK 384
Query: 208 -LSAFPCLVTLNPGV-RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSP 265
+ + T+ PG+ + V G H LA++ G+V+ WG ++G G V+ P
Sbjct: 385 GNNYYLSTPTIIPGLTNVIQVVCGTHHNLAVTSDGKVYSWGSAENYEVGQGDNDEDVAVP 444
>sp|Q54VW7|GACGG_DICDI Rho GTPase-activating protein gacGG OS=Dictyostelium discoideum
GN=gacGG PE=3 SV=1
Length = 1203
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 96/229 (41%), Gaps = 43/229 (18%)
Query: 216 TLNPGV-RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESS 274
T NP + I + G H+LAL++ G+++GWG QL I + P I I
Sbjct: 28 TFNPLIPNICFMDNGYNHSLALTETGELYGWGDNRHHQLSSNKAITSIDKPIKIQVI--- 84
Query: 275 YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLY---GQ 331
P VK I+CGG SA I + G L + WG G+
Sbjct: 85 -----------------------PNQRVKSISCGGNFSAAIMENGLL--YVWGTLIEGGK 119
Query: 332 CGQGSTDDELSP--NCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD 389
C + T +L CVS +GI V A T VY +G N+ GQLG GD
Sbjct: 120 CTESPTKVDLLKGVTCVS--IGINHCAVVADSPTT---PEKRSVYTWGTNRKGQLGVVGD 174
Query: 390 QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
PR + S + SV CG TA I + +VF WG+NK Q+
Sbjct: 175 SITNAPRRVTLGS----KAISVCCGEEFTAAIVEGNEVFVWGYNKSRQI 219
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 99/251 (39%), Gaps = 37/251 (14%)
Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEG-------------------Q 252
P + + P R+ +++ GG + A+ + G ++ WG EG
Sbjct: 78 PIKIQVIPNQRVKSISCGGNFSAAIMENGLLYVWGTLIEGGKCTESPTKVDLLKGVTCVS 137
Query: 253 LGLGSRIRMVSSPHPIPCIESSY--GKDRSAAL-SRGSVNSEGPGFRVPGNYVKGIACGG 309
+G+ + SP P S Y G +R L G + P G+ + CG
Sbjct: 138 IGINHCAVVADSP-TTPEKRSVYTWGTNRKGQLGVVGDSITNAPRRVTLGSKAISVCCGE 196
Query: 310 RHSAVITDAGALLTFGWGLYGQ-CGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICIS 368
+A I + + +G+ Q C S DE+ V LG I ++ + S
Sbjct: 197 EFTAAIVEGNEVFVWGYNKSRQICSNNS--DEIISIPVKPFLGRDIVELSCTKNYIAARS 254
Query: 369 SDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVF 428
G+V +G N+ Q+ GD + ++ P+ K +S H V+++ G++F
Sbjct: 255 GVGNVCVWGSNE--QVCRIGDD-----KFINFPN----KIKQISASTSHILVLSEKGEIF 303
Query: 429 CWGWNKYGQLG 439
WG ++ QL
Sbjct: 304 SWGNSEDNQLS 314
Score = 40.8 bits (94), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 26/169 (15%)
Query: 308 GGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELS----PNCVSSLLGIQIEGVAAGLWH 363
G HS +T+ G L +GWG + Q S++ ++ P + + +++ ++ G
Sbjct: 42 GYNHSLALTETGEL--YGWG-DNRHHQLSSNKAITSIDKPIKIQVIPNQRVKSISCGGNF 98
Query: 364 TICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
+ I +G +Y +G L GG E+ P +D L+ V VS G H AV+AD
Sbjct: 99 SAAIMENGLLYVWGT-----LIEGGKCTES-PTKVDL--LKGV--TCVSIGINHCAVVAD 148
Query: 424 ------DGKVFCWGWNKYGQLG-LGDVIDRNIPSQVTIEGCVPRNVACG 465
V+ WG N+ GQLG +GD I N P +VT+ G +V CG
Sbjct: 149 SPTTPEKRSVYTWGTNRKGQLGVVGDSIT-NAPRRVTL-GSKAISVCCG 195
Score = 37.4 bits (85), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 73/197 (37%), Gaps = 40/197 (20%)
Query: 62 DSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYT 121
+ R + TWG T+ GQ V P L ++A + G A+ EG EV+
Sbjct: 154 EKRSVYTWG-TNRKGQLGVVGDSITNAPRRVTLGSKA--ISVCCGEEFTAAIVEGNEVFV 210
Query: 122 WGWKE----CVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTD 177
WG+ + C + + L +D+ E + ++ RS V G
Sbjct: 211 WGYNKSRQICSNNSDEIISIPVKPFLGRDIVELSCT--KNYIAARSGV----GNVCVW-- 262
Query: 178 GRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAGGRHTLALS 237
GS E+ + GD+ FP +I ++A H L LS
Sbjct: 263 --GSNEQVCR---------------IGDDKFINFPN--------KIKQISASTSHILVLS 297
Query: 238 DIGQVWGWGYGGEGQLG 254
+ G+++ WG + QL
Sbjct: 298 EKGEIFSWGNSEDNQLS 314
>sp|Q86SG6|NEK8_HUMAN Serine/threonine-protein kinase Nek8 OS=Homo sapiens GN=NEK8 PE=1
SV=1
Length = 692
Score = 83.2 bits (204), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 112/277 (40%), Gaps = 47/277 (16%)
Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCI 271
P +V G + VA G H LALS +++ WG G G+LGLG+R S P +P
Sbjct: 434 PTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDSGRLGLGTR-ESHSCPQQVPM- 491
Query: 272 ESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 331
PG + + CG S ++T G L G + +
Sbjct: 492 -------------------------PPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNK 526
Query: 332 CG--QGSTDDELSPNC-VSSLLGIQIEGVAA-----------GLWHTICISSDGDVYAFG 377
G S +E P+ V L + G A G H+ +++ GD Y FG
Sbjct: 527 LGLDHLSLGEEPVPHQQVEEALSFTLLGSAPLDQEPLLSIDLGTAHSAAVTASGDCYTFG 586
Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQ 437
NQ GQLGT + P LE + V+CG T I + +V+ WG G+
Sbjct: 587 SNQHGQLGTNTRRGSRAP--CKVQGLEGIKMAMVACGDAFTVAIGAESEVYSWGKGARGR 644
Query: 438 LGLGDVIDRNIPSQVTIEGCVP---RNVACGWWHTLL 471
LG D D +P V ++ P +V+C +TLL
Sbjct: 645 LGRRDE-DAGLPRPVQLDETHPYTVTSVSCCHGNTLL 680
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 79/145 (54%), Gaps = 2/145 (1%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
G +K +ACG +A +TD G ++TFG G G G GS D P V +LLG ++ VA
Sbjct: 390 GVTIKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVA 449
Query: 359 AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
G H + +S++ +++A+G G+LG G ++ + P+ + P + ++ V CG +
Sbjct: 450 CGASHVLALSTERELFAWGRGDSGRLGLGTRESHSCPQQVPMPPGQE--AQRVVCGIDSS 507
Query: 419 AVIADDGKVFCWGWNKYGQLGLGDV 443
++ G+ G N++ +LGL +
Sbjct: 508 MILTVPGQALACGSNRFNKLGLDHL 532
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 89/195 (45%), Gaps = 14/195 (7%)
Query: 292 GPGFRVP--GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGS----TDDELSPNC 345
G R+P V +A G A +T +G L+ + G G GS ++ P
Sbjct: 322 GTPLRLPMLNTEVVQVAAGRTQKAGVTRSGRLILWEAPPLG-AGGGSLLPGAVEQPQPQF 380
Query: 346 VSSLL----GIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAP 401
+S L G+ I+ VA G + T C++ G + FG G LG G + P +++A
Sbjct: 381 ISRFLEGQSGVTIKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEA- 439
Query: 402 SLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPR 460
L V+CGA H ++ + ++F WG G+LGLG + P QV + G +
Sbjct: 440 -LLGYEMVQVACGASHVLALSTERELFAWGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQ 498
Query: 461 NVACGWWHTLLLAVP 475
V CG +++L VP
Sbjct: 499 RVVCGIDSSMILTVP 513
>sp|Q8K1R7|NEK9_MOUSE Serine/threonine-protein kinase Nek9 OS=Mus musculus GN=Nek9 PE=1
SV=2
Length = 984
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 83/179 (46%), Gaps = 12/179 (6%)
Query: 303 KGIACGGRHSAVITDAGALLTF-----GWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGV 357
+ + G H AV+T L T+ G L+GQ G G P V L G I V
Sbjct: 372 RQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQV 431
Query: 358 AAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHS---KSVSCG 414
+ G T+C++ +G +YAFG + +G +G P +L+ L S + VSCG
Sbjct: 432 SCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSG---PEVLEPMQLNFFLSNPVEQVSCG 488
Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACGWWHTLLL 472
H V+ + +V+ WG +YG+LGL D P +V + + + V CG T LL
Sbjct: 489 DNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGTFLL 547
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 106/254 (41%), Gaps = 36/254 (14%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
GD+ P V G I V+ G T+ ++D GQ++ +G G +G + VS
Sbjct: 409 GDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMG----VDKVS 464
Query: 264 SPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLT 323
P + ++ ++ N V+ ++CG H V+T + +
Sbjct: 465 GPEVLEPMQLNF---------------------FLSNPVEQVSCGDNHVVVLTRNKEVYS 503
Query: 324 FGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQ 383
+G G YG+ G S +D +P V + I V G T ++ G V A G N+F +
Sbjct: 504 WGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNK 563
Query: 384 LG--------TGGDQAETLPRLLD---APSLENVHSKSVSCGARHTAVIADDGKVFCWGW 432
LG + +P A L ++++ G HTA I + G++ +G
Sbjct: 564 LGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGC 623
Query: 433 NKYGQLGLGDVIDR 446
NK GQLG+G+ R
Sbjct: 624 NKCGQLGVGNYKKR 637
Score = 65.5 bits (158), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 102/271 (37%), Gaps = 48/271 (17%)
Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
+ V+ G H + L+ +V+ WG G G+LGL S E Y +
Sbjct: 482 VEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDS--------------EEDYYTPQRVD 527
Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG-----QCGQGST 337
+ + + + + CG + ++T +G +L G + QC G
Sbjct: 528 VPKALI-------------IVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGII 574
Query: 338 DDELS---PNCVSSLLGIQ-----IEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD 389
+ E P S L Q I +A G HT I G + FG N+ GQLG G
Sbjct: 575 NHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNY 634
Query: 390 QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL-------GD 442
+ LL P L VSCG T DD +F WG G+L + G
Sbjct: 635 KKRLGINLLGGP-LGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGS 693
Query: 443 VIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
I + P + +++C WHT+L+
Sbjct: 694 DICTSWPRPIFGSLHHVPDLSCRGWHTILIV 724
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 102/407 (25%), Positives = 153/407 (37%), Gaps = 75/407 (18%)
Query: 43 GSAWRDVCGGGCGFAMAISDSRKLITW----GSTDDLGQSYVTSGKHGEIPEPFPLPTEA 98
G + R VC G FA+ ++ ++L TW G T GQ P+
Sbjct: 368 GCSARQVCAGNTHFAV-VTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGK 426
Query: 99 SIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDK----DVFE-RQSS 153
+I + + G V VT+ G++Y +G D G+DK +V E Q +
Sbjct: 427 AIHQVSCGDDFTVCVTDEGQLYAFG-----------SDYYGCMGVDKVSGPEVLEPMQLN 475
Query: 154 FLTEQVSPRSQVSRSSGGTSSGTDGR-----GSGEEGSKRRRISLAKQTAESSSSGDENL 208
F +P QVS T + G GE G R+ L E
Sbjct: 476 FFLS--NPVEQVSCGDNHVVVLTRNKEVYSWGCGEYG----RLGL----------DSEED 519
Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLG---SRIRMVSSP 265
P V + + I V G T L+ G+V G +LGL S I +
Sbjct: 520 YYTPQRVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAY 579
Query: 266 HPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFG 325
H +P +S+ + + + ++ IA G H+A I + G LLTFG
Sbjct: 580 HEVP-YTTSFTLAKQLSFYK----------------IRTIAPGKTHTAAIDERGRLLTFG 622
Query: 326 WGLYGQCGQGSTDDELSPNCVSSLL-GIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQL 384
GQ G G+ L N + L G Q+ V+ G TI + D ++A+G G+L
Sbjct: 623 CNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRL 682
Query: 385 GT-------GGDQAETLPRLLDAPSLENVHS-KSVSCGARHTAVIAD 423
G D + PR P ++H +SC HT +I +
Sbjct: 683 AMTPTERPHGSDICTSWPR----PIFGSLHHVPDLSCRGWHTILIVE 725
>sp|Q8TD19|NEK9_HUMAN Serine/threonine-protein kinase Nek9 OS=Homo sapiens GN=NEK9 PE=1
SV=2
Length = 979
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 83/180 (46%), Gaps = 12/180 (6%)
Query: 303 KGIACGGRHSAVITDAGALLTF-----GWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGV 357
+ + G H AV+T L T+ G L+GQ G G P V L G I V
Sbjct: 372 RQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQV 431
Query: 358 AAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHS---KSVSCG 414
+ G T+C++ +G +YAFG + +G +G P +L+ L S + VSCG
Sbjct: 432 SCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAG---PEVLEPMQLNFFLSNPVEQVSCG 488
Query: 415 ARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACGWWHTLLLA 473
H V+ + +V+ WG +YG+LGL D P +V + + + V CG T LL
Sbjct: 489 DNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLT 548
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 106/254 (41%), Gaps = 36/254 (14%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
GD+ P V G I V+ G T+ ++D GQ++ +G G +G + V+
Sbjct: 409 GDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMG----VDKVA 464
Query: 264 SPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLT 323
P + ++ ++ N V+ ++CG H V+T + +
Sbjct: 465 GPEVLEPMQLNF---------------------FLSNPVEQVSCGDNHVVVLTRNKEVYS 503
Query: 324 FGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQ 383
+G G YG+ G S +D +P V + I V G T ++ G V A G N+F +
Sbjct: 504 WGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNK 563
Query: 384 LG--------TGGDQAETLPRLLD---APSLENVHSKSVSCGARHTAVIADDGKVFCWGW 432
LG + +P A L ++++ G HTA I + G++ +G
Sbjct: 564 LGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGC 623
Query: 433 NKYGQLGLGDVIDR 446
NK GQLG+G+ R
Sbjct: 624 NKCGQLGVGNYKKR 637
Score = 65.9 bits (159), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 102/271 (37%), Gaps = 48/271 (17%)
Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAA 282
+ V+ G H + L+ +V+ WG G G+LGL S E Y +
Sbjct: 482 VEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDS--------------EEDYYTPQKVD 527
Query: 283 LSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYG-----QCGQGST 337
+ + + + + CG + ++T +G +L G + QC G
Sbjct: 528 VPKALI-------------IVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGII 574
Query: 338 DDELS---PNCVSSLLGIQ-----IEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGD 389
+ E P S L Q I +A G HT I G + FG N+ GQLG G
Sbjct: 575 NHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNY 634
Query: 390 QAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL-------GD 442
+ LL P L VSCG T DD +F WG G+L + G
Sbjct: 635 KKRLGINLLGGP-LGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGS 693
Query: 443 VIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
I + P + +++C WHT+L+
Sbjct: 694 DICTSWPRPIFGSLHHVPDLSCRGWHTILIV 724
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 154/407 (37%), Gaps = 75/407 (18%)
Query: 43 GSAWRDVCGGGCGFAMAISDSRKLITW----GSTDDLGQSYVTSGKHGEIPEPFPLPTEA 98
G + R VC G FA+ ++ ++L TW G T GQ P+
Sbjct: 368 GCSARQVCAGNTHFAV-VTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGK 426
Query: 99 SIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDK----DVFE-RQSS 153
+I + + G V VT+ G++Y +G D G+DK +V E Q +
Sbjct: 427 AIRQVSCGDDFTVCVTDEGQLYAFG-----------SDYYGCMGVDKVAGPEVLEPMQLN 475
Query: 154 FLTEQVSPRSQVSRSSGGTSSGTDGR-----GSGEEGSKRRRISLAKQTAESSSSGDENL 208
F +P QVS T + G GE G R+ L + +
Sbjct: 476 FFLS--NPVEQVSCGDNHVVVLTRNKEVYSWGCGEYG----RLGLDSEEDYYT------- 522
Query: 209 SAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLG---SRIRMVSSP 265
P V + + I V G T L+ G+V G +LGL S I +
Sbjct: 523 ---PQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAY 579
Query: 266 HPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFG 325
H +P +S+ + + + ++ IA G H+A I + G LLTFG
Sbjct: 580 HEVP-YTTSFTLAKQLSFYK----------------IRTIAPGKTHTAAIDERGRLLTFG 622
Query: 326 WGLYGQCGQGSTDDELSPNCVSSLL-GIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQL 384
GQ G G+ L N + L G Q+ V+ G TI + D ++A+G G+L
Sbjct: 623 CNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRL 682
Query: 385 GT-------GGDQAETLPRLLDAPSLENVHS-KSVSCGARHTAVIAD 423
G D + PR P ++H +SC HT +I +
Sbjct: 683 AMTPTERPHGSDICTSWPR----PIFGSLHHVPDLSCRGWHTILIVE 725
>sp|Q7ZZC8|NEK9_XENLA Serine/threonine-protein kinase Nek9 OS=Xenopus laevis GN=nek9 PE=2
SV=1
Length = 944
Score = 79.7 bits (195), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 79/178 (44%), Gaps = 6/178 (3%)
Query: 303 KGIACGGRHSAVITDAGALLTF-----GWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGV 357
+ + G H AV+T L T+ G L+GQ G G P V L G ++ V
Sbjct: 354 RQVCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQPKHVEKLQGKSVQKV 413
Query: 358 AAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARH 417
+ G T+CI+ +G +Y+FG + +G LG + L N VSCG H
Sbjct: 414 SCGSDFTVCITDEGQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFFLNEPVDQVSCGDSH 473
Query: 418 TAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE-GCVPRNVACGWWHTLLLAV 474
+ V+ WG +YG+LGL D P +V ++ G NV CG + LL +
Sbjct: 474 IMALTRSKSVYSWGCGEYGRLGLDSEDDVYSPQKVEVQRGLCIVNVCCGSDGSFLLTL 531
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 99/234 (42%), Gaps = 36/234 (15%)
Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDR 279
G + V+ G T+ ++D GQ++ +G G LG + S G +
Sbjct: 407 GKSVQKVSCGSDFTVCITDEGQLYSFGSDYYGCLG----------------VNQSAGSEV 450
Query: 280 SAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDD 339
L +E V ++CG H +T + ++ ++G G YG+ G S DD
Sbjct: 451 LEPLLVDFFLNEP---------VDQVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSEDD 501
Query: 340 ELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQA-------- 391
SP V G+ I V G + ++ G V A G N+ +LG A
Sbjct: 502 VYSPQKVEVQRGLCIVNVCCGSDGSFLLTLTGKVLACGLNEHNKLGLNQYTAGIINHEAF 561
Query: 392 ETLP---RLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGD 442
+ +P L A L +S+S G HTA I + G++ +G NK GQLG+GD
Sbjct: 562 QEVPYTTSLTLAKQLSFYKIRSISPGRTHTAAIDERGRLLTFGSNKCGQLGVGD 615
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 97/229 (42%), Gaps = 36/229 (15%)
Query: 220 GVRIATVAAGGRHTLALSDIGQVWGW-----GYGGEGQLGLGSRIRMVSSPHPIPCIESS 274
G R V AG H ++ +++ W G GQLG G R +S
Sbjct: 350 GWRARQVCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDR--------------AS 395
Query: 275 YGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCG- 333
Y + + ++ G V+ ++CG + ITD G L +FG YG G
Sbjct: 396 YRQPKHVE-------------KLQGKSVQKVSCGSDFTVCITDEGQLYSFGSDYYGCLGV 442
Query: 334 -QGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAE 392
Q + + L P V L ++ V+ G H + ++ VY++G ++G+LG +
Sbjct: 443 NQSAGSEVLEPLLVDFFLNEPVDQVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSEDDV 502
Query: 393 TLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
P+ ++ + +V CG+ + ++ GKV G N++ +LGL
Sbjct: 503 YSPQKVEVQ--RGLCIVNVCCGSDGSFLLTLTGKVLACGLNEHNKLGLN 549
Score = 62.8 bits (151), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 141/392 (35%), Gaps = 60/392 (15%)
Query: 102 KAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSP 161
+ AG AH VT E+YTW + ++ G L G D+ + + Q
Sbjct: 355 QVCAGDAHFAVVTVEKELYTWVNMQ--GGSKLHGQLGHG---DRASYRQPKHVEKLQGKS 409
Query: 162 RSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGV 221
+VS S T TD GS Q+A G E L P LV
Sbjct: 410 VQKVSCGSDFTVCITDEGQLYSFGSDYYGCLGVNQSA-----GSEVLE--PLLVDFFLNE 462
Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
+ V+ G H +AL+ V+ WG G G+LGL S V SP +
Sbjct: 463 PVDQVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSEDD-VYSPQKV------------- 508
Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCG-----QGS 336
+ RG + + CG S ++T G +L G + + G G
Sbjct: 509 EVQRGLC-------------IVNVCCGSDGSFLLTLTGKVLACGLNEHNKLGLNQYTAGI 555
Query: 337 TDDE--------LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGG 388
+ E S L +I ++ G HT I G + FG N+ GQLG G
Sbjct: 556 INHEAFQEVPYTTSLTLAKQLSFYKIRSISPGRTHTAAIDERGRLLTFGSNKCGQLGVGD 615
Query: 389 DQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL-------G 441
+ LL P L VSCG T D +F WG G+L + G
Sbjct: 616 YRKHLGINLLGGP-LGGKQVIRVSCGDEFTTAATADNHIFAWGNGGNGRLAMTPNERPQG 674
Query: 442 DVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
I + P + +++C WHT+L+
Sbjct: 675 SDICTSWPRPIFGSLHHVTDLSCRGWHTILIV 706
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 97/400 (24%), Positives = 149/400 (37%), Gaps = 69/400 (17%)
Query: 47 RDVCGGGCGFAMAISDSRKLITWGSTD-------DLGQSYVTSGKHGEIPEPFPLPTEAS 99
R VC G FA+ ++ ++L TW + LG S + P+ S
Sbjct: 354 RQVCAGDAHFAV-VTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQ---PKHVEKLQGKS 409
Query: 100 IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFE--RQSSFLTE 157
+ K + G V +T+ G++Y++G +G L +V E FL E
Sbjct: 410 VQKVSCGSDFTVCITDEGQLYSFG-------SDYYGCLGVNQSAGSEVLEPLLVDFFLNE 462
Query: 158 QVSPRSQVSRSSGGTSSGTDGR-----GSGEEGSKRRRISLAKQTAESSSSGDENLSAFP 212
P QVS + T + G GE G R+ L S D+ S P
Sbjct: 463 ---PVDQVSCGDSHIMALTRSKSVYSWGCGEYG----RLGL--------DSEDDVYS--P 505
Query: 213 CLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIE 272
V + G+ I V G + L+ G+V G +LGL + + +
Sbjct: 506 QKVEVQRGLCIVNVCCGSDGSFLLTLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVP 565
Query: 273 SSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQC 332
+ + LS + S PG H+A I + G LLTFG GQ
Sbjct: 566 YTTSLTLAKQLSFYKIRSISPG--------------RTHTAAIDERGRLLTFGSNKCGQL 611
Query: 333 GQGSTDDELSPNCVSSLL-GIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT----- 386
G G L N + L G Q+ V+ G T ++D ++A+G G+L
Sbjct: 612 GVGDYRKHLGINLLGGPLGGKQVIRVSCGDEFTTAATADNHIFAWGNGGNGRLAMTPNER 671
Query: 387 --GGDQAETLPRLLDAPSLENVHSKS-VSCGARHTAVIAD 423
G D + PR P ++H + +SC HT +I +
Sbjct: 672 PQGSDICTSWPR----PIFGSLHHVTDLSCRGWHTILIVE 707
>sp|P21827|RCC1_YEAST Guanine nucleotide exchange factor SRM1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SRM1 PE=1 SV=1
Length = 482
Score = 79.0 bits (193), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 108/442 (24%), Positives = 170/442 (38%), Gaps = 93/442 (21%)
Query: 70 GSTDDLGQSYVTSGKHGEIP--EPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWKEC 127
GS +LG + K + P PF EA I+ A G H +A+ E V++WG +
Sbjct: 54 GSMCELGLGPLAKNKEVKRPRLNPFLPRDEAKIISFAVGGMHTLALDEESNVWSWGCNDV 113
Query: 128 VPSGRVFGDLSTGTGLDKDVFERQSSF-----LTEQVSPRSQVSRSSGGTSSGTDGRGSG 182
GR D S KD+ SS L E S +++ R S +
Sbjct: 114 GALGR---DTSNAKEQLKDMDADDSSDDEDGDLNELESTPAKIPRESFPPLA-------- 162
Query: 183 EEGSKRRRISLAKQTAESSSSGDE---------------------NLSAFPCLVTLNPGV 221
EG K +++ + + S E + P V
Sbjct: 163 -EGHKVVQLAATDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKY 221
Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLG--LGSRIRMVS-SPHPIPCIESSYGKD 278
I +A G H L L + G V+ WG G + QLG + R R+ + P P
Sbjct: 222 NIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGRKVMERFRLKTLDPRPF---------- 271
Query: 279 RSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTD 338
G R +VK IA G H +T L+++G +GQCG
Sbjct: 272 ---------------GLR----HVKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSEDV 312
Query: 339 DE----LSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL 394
++ P ++ + I +AAG H++ +S DGD+Y+ G ++G D L
Sbjct: 313 EDGALVTKPKRLALPDNVVIRSIAAGEHHSLILSQDGDLYSCGRLDMFEVGIPKD---NL 369
Query: 395 P-----------RLLDAPS-LENV-HSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLG 441
P R + P+ L NV KSV+ G+ H+ +A +G + WG+ + +GLG
Sbjct: 370 PEYTYKDVHGKARAVPLPTKLNNVPKFKSVAAGSHHSVAVAQNGIAYSWGFGETYAVGLG 429
Query: 442 DV-IDRNIPSQVTIEGCVPRNV 462
D +P+++ N+
Sbjct: 430 PFEDDTEVPTRIKNTATQDHNI 451
Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 121/281 (43%), Gaps = 33/281 (11%)
Query: 217 LNPGV-----RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS-----RIRMVSSPH 266
LNP + +I + A GG HTLAL + VW WG G LG + +++ + +
Sbjct: 75 LNPFLPRDEAKIISFAVGGMHTLALDEESNVWSWGCNDVGALGRDTSNAKEQLKDMDADD 134
Query: 267 PIPCIESSYGKDRS--AALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTF 324
+ + S A + R S G +V V+ A A+ ++ +
Sbjct: 135 SSDDEDGDLNELESTPAKIPRESFPPLAEGHKV----VQLAATDNMSCALFSNGE---VY 187
Query: 325 GWGLYGQCGQG-------STDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
WG + +C +G + +P V + I +A G H + + +G V+A+G
Sbjct: 188 AWGTF-RCNEGILGFYQDKIKIQKTPWKVPTFSKYNIVQLAPGKDHILFLDEEGMVFAWG 246
Query: 378 GNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQ 437
Q QLG + L + LD H K ++ G H + D K+ WG N++GQ
Sbjct: 247 NGQQNQLGRKVMERFRL-KTLDPRPFGLRHVKYIASGENHCFALTKDNKLVSWGLNQFGQ 305
Query: 438 LGLGDVIDR----NIPSQVTI-EGCVPRNVACGWWHTLLLA 473
G+ + ++ P ++ + + V R++A G H+L+L+
Sbjct: 306 CGVSEDVEDGALVTKPKRLALPDNVVIRSIAAGEHHSLILS 346
>sp|Q90XC2|NEK8_DANRE Serine/threonine-protein kinase Nek8 OS=Danio rerio GN=nek8 PE=2
SV=1
Length = 697
Score = 79.0 bits (193), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 80/152 (52%), Gaps = 2/152 (1%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
G +K ++CG + +TD G ++TFG G G G G+ +D P V +LLG ++ V+
Sbjct: 397 GVTIKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHGNFNDVTQPKIVEALLGYELVQVS 456
Query: 359 AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
G H + ++++ +V+++G G+LG + P+ + P+ + ++ V CG +
Sbjct: 457 CGASHVLAVTNEREVFSWGRGDNGRLGLATQDSHNCPQQVSLPA--DFEAQRVLCGVDCS 514
Query: 419 AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPS 450
+++ ++ G N++ +LGL V PS
Sbjct: 515 MIMSTQHQILACGNNRFNKLGLDKVSGTEEPS 546
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 6/120 (5%)
Query: 339 DELSPNCVSSLL----GIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL 394
+++ P +S L G+ I+ V+ G T C++ G + FG G LG G T
Sbjct: 381 EQMQPQFISRFLEGQSGVTIKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHGNFNDVTQ 440
Query: 395 PRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTI 454
P++++A L VSCGA H + ++ +VF WG G+LGL N P QV++
Sbjct: 441 PKIVEA--LLGYELVQVSCGASHVLAVTNEREVFSWGRGDNGRLGLATQDSHNCPQQVSL 498
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 118/290 (40%), Gaps = 51/290 (17%)
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
G+ N P +V G + V+ G H LA+++ +V+ WG G G+LGL +
Sbjct: 433 GNFNDVTQPKIVEALLGYELVQVSCGASHVLAVTNEREVFSWGRGDNGRLGLAT------ 486
Query: 264 SPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNY-VKGIACGGRHSAVITDAGALL 322
+ S+ + +L P ++ + + CG S +++ +L
Sbjct: 487 --------QDSHNCPQQVSL--------------PADFEAQRVLCGVDCSMIMSTQHQIL 524
Query: 323 TFGWGLYGQCG--QGSTDDELSPNCVSSLLGI------------QIEGVAAGLWHTICIS 368
G + + G + S +E S C + + +I + G H++ ++
Sbjct: 525 ACGNNRFNKLGLDKVSGTEEPSSFCQVEEVHLFQLVQSAPLNTEKIVYIDIGTAHSVAVT 584
Query: 369 SDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVF 428
G + FG NQ GQLG ++ +P L+ + +CG T I +G+V+
Sbjct: 585 EKGQCFTFGSNQHGQLGCSHRRSSRVP--YQVSGLQGI--TMAACGDAFTLAIGAEGEVY 640
Query: 429 CWGWNKYGQLGLGDVIDRNIPSQVTIE---GCVPRNVACGWWHTLLLAVP 475
WG G+LG + D IP V ++ +VAC +TLL P
Sbjct: 641 TWGKGARGRLGRKEE-DFGIPKPVQLDESHAFTVTSVACCHGNTLLAVKP 689
Score = 35.4 bits (80), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 56/130 (43%), Gaps = 21/130 (16%)
Query: 11 ERVVFMWGYLPGA---LPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSRKLI 67
ER VF WG L + P V LP A R +CG C +M +S +++
Sbjct: 468 EREVFSWGRGDNGRLGLATQDSHNCPQQVSLPADF-EAQRVLCGVDC--SMIMSTQHQIL 524
Query: 68 TWGST--DDLGQSYVTSGKH------------GEIPEPFPLPTEASIVKAAAGWAHCVAV 113
G+ + LG V+ + ++ + PL TE IV G AH VAV
Sbjct: 525 ACGNNRFNKLGLDKVSGTEEPSSFCQVEEVHLFQLVQSAPLNTE-KIVYIDIGTAHSVAV 583
Query: 114 TEGGEVYTWG 123
TE G+ +T+G
Sbjct: 584 TEKGQCFTFG 593
>sp|Q91ZR4|NEK8_MOUSE Serine/threonine-protein kinase Nek8 OS=Mus musculus GN=Nek8 PE=1
SV=1
Length = 698
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 77/142 (54%), Gaps = 2/142 (1%)
Query: 299 GNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVA 358
G +K +ACG +A +TD G ++TFG G G G G+ D P V +LLG ++ VA
Sbjct: 396 GVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGNLTDISQPTIVEALLGYEMVQVA 455
Query: 359 AGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHT 418
G H + +S+DG+++A+G G+LG G ++ P+ P ++ V CG +
Sbjct: 456 CGASHVLALSTDGELFAWGRGDGGRLGLGTRESHNCPQ--QVPVAPGQEAQRVVCGIDSS 513
Query: 419 AVIADDGKVFCWGWNKYGQLGL 440
++ G+V G N++ +LGL
Sbjct: 514 MILTSPGRVLACGSNRFNKLGL 535
Score = 73.2 bits (178), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 111/411 (27%), Positives = 160/411 (38%), Gaps = 74/411 (18%)
Query: 86 GEIPEPFPLPT-EASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLD 144
G + P LP +V+ AAG VT G + W E P G G L G
Sbjct: 325 GGLSSPLRLPMLNTEVVQVAAGRTQKAGVTRSGRLILW---EAPPLGAGGGTLLPGA--- 378
Query: 145 KDVFERQSSFLTEQVSPRSQVSRSSGG-----TSSGTDGRGSGEEGSKRRRISLAKQTAE 199
V Q F++ + +S V+ T+ TD R I + +
Sbjct: 379 --VELPQPQFVSRFLEGQSGVTIKHVACGDLFTACLTD-----------RGIIMTFGSGS 425
Query: 200 SSSSGDENLSAF--PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS 257
+ G NL+ P +V G + VA G H LALS G+++ WG G G+LGLG+
Sbjct: 426 NGCLGHGNLTDISQPTIVEALLGYEMVQVACGASHVLALSTDGELFAWGRGDGGRLGLGT 485
Query: 258 RIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITD 317
R + P +P PG + + CG S ++T
Sbjct: 486 R-ESHNCPQQVPV--------------------------APGQEAQRVVCGIDSSMILTS 518
Query: 318 AGALLTFGWGLYGQCG--QGSTDDELSP-NCVSSLLGIQIEG-----------VAAGLWH 363
G +L G + + G S D+E P V L G V G H
Sbjct: 519 PGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEEALSFTPLGSAPLDQEPLLCVDLGTAH 578
Query: 364 TICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIAD 423
+ I++ GD Y FG NQ GQLGT + P + LE + V+CG T +
Sbjct: 579 SAAITASGDCYTFGSNQHGQLGTSSRRVSRAPCRVQG--LEGIKMVMVACGDAFTVAVGA 636
Query: 424 DGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVP---RNVACGWWHTLL 471
+G+V+ WG G+LG D D +P V ++ P +V+C +TLL
Sbjct: 637 EGEVYSWGKGTRGRLGRRDE-DAGLPRPVQLDETHPYMVTSVSCCHGNTLL 686
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 66/138 (47%), Gaps = 7/138 (5%)
Query: 343 PNCVSSLL----GIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
P VS L G+ I+ VA G T C++ G + FG G LG G + P ++
Sbjct: 384 PQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGNLTDISQPTIV 443
Query: 399 DAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIE-GC 457
+A L V+CGA H ++ DG++F WG G+LGLG N P QV + G
Sbjct: 444 EA--LLGYEMVQVACGASHVLALSTDGELFAWGRGDGGRLGLGTRESHNCPQQVPVAPGQ 501
Query: 458 VPRNVACGWWHTLLLAVP 475
+ V CG +++L P
Sbjct: 502 EAQRVVCGIDSSMILTSP 519
>sp|Q9CYF5|WBS16_MOUSE Williams-Beuren syndrome chromosomal region 16 protein homolog
OS=Mus musculus GN=Wbscr16 PE=2 SV=1
Length = 461
Score = 75.5 bits (184), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 139/355 (39%), Gaps = 105/355 (29%)
Query: 222 RIATVAAGGRHTLALS---DIGQVWGWGYGGEGQLGL---------GSRIRMVSSPHPIP 269
+I++ A G TL S D+ +VWG G + QLG G + SP P+P
Sbjct: 105 KISSAACGYGFTLLSSKTKDVTKVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVPLP 164
Query: 270 --------CIESSYGK-------DRSAALSRGSVNSEGP-GFRVPGNYVKG--------- 304
++ S G+ DR S G+ NS G G +V + V
Sbjct: 165 LDRPQETKVLQVSCGRAHSLVLTDREGVFSMGN-NSHGQCGRKVVEDEVYSESHKVHRMQ 223
Query: 305 --------IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVS-SLLGIQIE 355
+ CG HS +TD G + + GWG GQ G G + +P+ + L G+ +
Sbjct: 224 DFDGQVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPSKLGGDLAGVTVV 283
Query: 356 GVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETL--------------------- 394
VA + +S+DG V+ +G +++ QL + D +
Sbjct: 284 QVATYGDCCLALSADGGVFGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGKVKQVACGGT 343
Query: 395 ----------------------PRLLDA-------PSL-------ENVHSKSVSCGARHT 418
P+LL+ P+L V + CG H
Sbjct: 344 GCAVLNAEGHVFVWGYGILGKGPKLLETAIPEMIPPTLFGLTEFNPEVQVSQIRCGLSHF 403
Query: 419 AVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPRNVACGWWHTLLLA 473
A + + G++F WG N G LG+G + D+ P +VT+ G P +VACG H + LA
Sbjct: 404 AALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPG-EPVDVACGVDHMVTLA 457
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 97/426 (22%), Positives = 157/426 (36%), Gaps = 79/426 (18%)
Query: 22 GALPQRSPILSPLVVRLPLTVGSAWRDVCGGGCGFAMAISDSR-KLIT--WG-------- 70
G P+R + P+ RL L + CG+ + S+ K +T WG
Sbjct: 86 GLRPRRR--IQPVPYRLELD-----HKISSAACGYGFTLLSSKTKDVTKVWGMGLNKDSQ 138
Query: 71 -----STDDLGQSYVTSGKHGEIPEPFPLPTEASIVKAAAGWAHCVAVTEGGEVYTWGWK 125
S D + Y + +P P P E +++ + G AH + +T+ V++ G
Sbjct: 139 LGFHRSRKDKTRGYEYVLEPSPVPLPLDRPQETKVLQVSCGRAHSLVLTDREGVFSMGNN 198
Query: 126 ECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSSGGTSSG-TDGRGSGEE 184
GR + + K R F + V S T G G G +
Sbjct: 199 SHGQCGRKVVEDEVYSESHK--VHRMQDFDGQVVQVVCGQDHSLFLTDKGEVYSCGWGAD 256
Query: 185 GSKRRRISLAKQTAESSSSGDENLSAFPCLVTLN-PGVRIATVAAGGRHTLALSDIGQVW 243
G + G N+++ P + + GV + VA G LALS G V+
Sbjct: 257 GQ--------------TGLGHYNITSTPSKLGGDLAGVTVVQVATYGDCCLALSADGGVF 302
Query: 244 GWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVK 303
GWG QL + V+ P +P S GK VK
Sbjct: 303 GWGNSEYLQLASVTDSTQVNVPRCLPF--SGVGK------------------------VK 336
Query: 304 GIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLG-------IQIEG 356
+ACGG AV+ G + +G+G+ G+ G + + +L G +Q+
Sbjct: 337 QVACGGTGCAVLNAEGHVFVWGYGILGK-GPKLLETAIPEMIPPTLFGLTEFNPEVQVSQ 395
Query: 357 VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGAR 416
+ GL H +++ G+++ +G N G LG G + + P + P V+CG
Sbjct: 396 IRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPG----EPVDVACGVD 451
Query: 417 HTAVIA 422
H +A
Sbjct: 452 HMVTLA 457
Score = 34.3 bits (77), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 13/83 (15%)
Query: 214 LVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS--------RIRMVSSP 265
L NP V+++ + G H AL++ G+++ WG G LG+G R+ M P
Sbjct: 384 LTEFNPEVQVSQIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGEP 443
Query: 266 HPIPCIESSYGKDRSAALSRGSV 288
+ C G D L++ +
Sbjct: 444 VDVAC-----GVDHMVTLAKSFI 461
>sp|Q3MHW0|SRGEF_BOVIN Secretion-regulating guanine nucleotide exchange factor OS=Bos
taurus GN=SERGEF PE=2 SV=1
Length = 464
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 87/198 (43%), Gaps = 30/198 (15%)
Query: 235 ALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPG 294
A+ ++ WG GQLGLG + ++S+ S + K
Sbjct: 10 AVPTAAALFAWGANSYGQLGLGHKEDVLSAQQ-----LSDFCKS---------------- 48
Query: 295 FRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQI 354
+K I GG HSAV+TD G+L G GQ G G T++ L SLLG I
Sbjct: 49 -----GCIKRITGGGGHSAVVTDEGSLFVCGLNKDGQLGLGHTEEVLYFTPCKSLLGCAI 103
Query: 355 EGVAAGLWHTICISSDGDVYAFGGNQFGQLGT-GGDQAETLPRLLDAPSLENVHSKSVSC 413
+ VA G TI ++ +G V + G N FGQLG G + +P+ ++ L S++
Sbjct: 104 QQVACGWDFTIILTENGQVLSCGSNSFGQLGVPHGPRRCVIPQAIE---LLREKVVSIAA 160
Query: 414 GARHTAVIADDGKVFCWG 431
G RH G VF WG
Sbjct: 161 GLRHALAATASGTVFQWG 178
Score = 65.5 bits (158), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 96/244 (39%), Gaps = 41/244 (16%)
Query: 205 DENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSS 264
+E L PC L G I VA G T+ L++ GQV G GQLG+ R
Sbjct: 87 EEVLYFTPCKSLL--GCAIQQVACGWDFTIILTENGQVLSCGSNSFGQLGVPHGPRRCVI 144
Query: 265 PHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTF 324
P I + V IA G RH+ T +G + +
Sbjct: 145 PQAIELLREK---------------------------VVSIAAGLRHALAATASGTVFQW 177
Query: 325 GWGLYGQCGQGSTDDEL-------SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFG 377
G GL + L P+ V+ L Q V AG H+ ++ G++Y +G
Sbjct: 178 GTGLASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAGSDHSASLTDAGELYVWG 237
Query: 378 GNQFGQLGTGGDQAE--TLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKY 435
N+ GQL + QA LP+ ++A +N +V G H GKVF WG Y
Sbjct: 238 SNKHGQLAS---QAAFLLLPQRIEARCFQNEKIAAVWSGWTHLVAQTVTGKVFTWGRADY 294
Query: 436 GQLG 439
GQLG
Sbjct: 295 GQLG 298
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 107/274 (39%), Gaps = 43/274 (15%)
Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
++ ++AAG RH LA + G V+ WG G L S R + +P ++ +
Sbjct: 154 KVVSIAAGLRHALAATASGTVFQWGTG------LASSGRRLCPGQTLPLFLTA----KEP 203
Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGST---- 337
+ G NS+ + G HSA +TDAG L +G +GQ +
Sbjct: 204 STVTGLENSQ----------AVCVLAGSDHSASLTDAGELYVWGSNKHGQLASQAAFLLL 253
Query: 338 DDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRL 397
+ C + +I V +G H + + G V+ +G +GQLG + E
Sbjct: 254 PQRIEARCFQNE---KIAAVWSGWTHLVAQTVTGKVFTWGRADYGQLGRTVETREGWESE 310
Query: 398 LDAPSLEN--------------VHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDV 443
PSL + +SCG+ H + G WGWN++G G G
Sbjct: 311 KQDPSLPGSGPQKGTPSCLPCLTGATEISCGSEHNLAVIG-GVCHSWGWNEHGMCGDGTE 369
Query: 444 IDRNIPSQVT-IEGCVPRNVACGWWHTLLLAVPP 476
D P V + + +V CG H+L L P
Sbjct: 370 ADVWAPKPVPGLRFFLGLHVGCGAGHSLALCQLP 403
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 61/112 (54%), Gaps = 12/112 (10%)
Query: 367 ISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHS----KSVSCGARHTAVIA 422
+ + ++A+G N +GQLG G + +L A L + K ++ G H+AV+
Sbjct: 11 VPTAAALFAWGANSYGQLGLGHKE-----DVLSAQQLSDFCKSGCIKRITGGGGHSAVVT 65
Query: 423 DDGKVFCWGWNKYGQLGLG--DVIDRNIPSQVTIEGCVPRNVACGWWHTLLL 472
D+G +F G NK GQLGLG + + P + ++ GC + VACGW T++L
Sbjct: 66 DEGSLFVCGLNKDGQLGLGHTEEVLYFTPCK-SLLGCAIQQVACGWDFTIIL 116
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 74/161 (45%), Gaps = 4/161 (2%)
Query: 312 SAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQ-IEGVAAGLWHTICISSD 370
S + A AL +G YGQ G G +D LS +S I+ + G H+ ++ +
Sbjct: 8 SEAVPTAAALFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGCIKRITGGGGHSAVVTDE 67
Query: 371 GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCW 430
G ++ G N+ GQLG G E + SL + V+CG T ++ ++G+V
Sbjct: 68 GSLFVCGLNKDGQLGLG--HTEEVLYFTPCKSLLGCAIQQVACGWDFTIILTENGQVLSC 125
Query: 431 GWNKYGQLGLGDVIDRN-IPSQVTIEGCVPRNVACGWWHTL 470
G N +GQLG+ R IP + + ++A G H L
Sbjct: 126 GSNSFGQLGVPHGPRRCVIPQAIELLREKVVSIAAGLRHAL 166
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 86/374 (22%), Positives = 135/374 (36%), Gaps = 72/374 (19%)
Query: 48 DVCGGGC--------GFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEAS 99
D C GC G + ++D L G D GQ + + P +
Sbjct: 44 DFCKSGCIKRITGGGGHSAVVTDEGSLFVCGLNKD-GQLGLGHTEEVLYFTPCKSLLGCA 102
Query: 100 IVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQ- 158
I + A GW + +TE G+V + G FG L G + V + L E+
Sbjct: 103 IQQVACGWDFTIILTENGQVLSCG-------SNSFGQLGVPHGPRRCVIPQAIELLREKV 155
Query: 159 VSPRSQVSRSSGGTSSGTDGR-GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTL 217
VS + + + T+SGT + G+G S RR QT + E P VT
Sbjct: 156 VSIAAGLRHALAATASGTVFQWGTGLASSGRRLCP--GQTLPLFLTAKE-----PSTVTG 208
Query: 218 NPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESS--- 274
+ V AG H+ +L+D G+++ WG GQL + ++ C ++
Sbjct: 209 LENSQAVCVLAGSDHSASLTDAGELYVWGSNKHGQLASQAAFLLLPQRIEARCFQNEKIA 268
Query: 275 -------------------------YGKDRSAALSRGSVNSEGPGFRVPGNYVKG----- 304
YG+ +R SE +PG+ +
Sbjct: 269 AVWSGWTHLVAQTVTGKVFTWGRADYGQLGRTVETREGWESEKQDPSLPGSGPQKGTPSC 328
Query: 305 ---------IACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSL---LGI 352
I+CG H+ + G ++GW +G CG G+ D +P V L LG+
Sbjct: 329 LPCLTGATEISCGSEHNLAVI-GGVCHSWGWNEHGMCGDGTEADVWAPKPVPGLRFFLGL 387
Query: 353 QIEGVAAGLWHTIC 366
+ G AG +C
Sbjct: 388 HV-GCGAGHSLALC 400
>sp|Q96I51|WBS16_HUMAN Williams-Beuren syndrome chromosomal region 16 protein OS=Homo
sapiens GN=WBSCR16 PE=1 SV=2
Length = 464
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 112/262 (42%), Gaps = 42/262 (16%)
Query: 222 RIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSYGKDRSA 281
++ VA G H+L L+D G+V+ G+G +GQ GLG + SSP + G D +
Sbjct: 231 QVVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLG-HYNITSSP-------TKLGGDLAG 282
Query: 282 ALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL 341
N ++ G AV D G FGWG S D
Sbjct: 283 V-----------------NVIQVATYGDCCLAVSADGG---LFGWGNSEYLQLASVTDST 322
Query: 342 S---PNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLL 398
P C+ ++ A G ++ +G V+ +G +G LG G + E+ +
Sbjct: 323 QVNVPRCLHFSGVGKVRQAACGGTGCAVLNGEGHVFVWG---YGILGKGPNLVESAVPEM 379
Query: 399 DAPSL-------ENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVIDRNIPSQ 451
P+L + + CG H A + + G++F WG N G LG+G + D+ P +
Sbjct: 380 IPPTLFGLTEFNPEIQVSRIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWR 439
Query: 452 VTIEGCVPRNVACGWWHTLLLA 473
VT+ G P +VACG H + LA
Sbjct: 440 VTMPG-EPVDVACGVDHMVTLA 460
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 106/263 (40%), Gaps = 25/263 (9%)
Query: 212 PCLVTLNPGVRIATVAAGGRHTLALS---DIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
P L +I++ A G TL S D+ +VWG G + QLG
Sbjct: 98 PVPYRLELDQKISSAACGYGFTLLSSKTADVTKVWGMGLNKDSQLGFH------------ 145
Query: 269 PCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTFGWGL 328
S K R P R V ++CG HS V+TD + + G
Sbjct: 146 ---RSRKDKTRGYEYVLEPSPVSLPLDRPQETRVLQVSCGRAHSLVLTDREGVFSMGNNS 202
Query: 329 YGQCGQGSTDDEL--SPNCVSSLLGI--QIEGVAAGLWHTICISSDGDVYAFGGNQFGQL 384
YGQCG+ ++E+ + V + Q+ VA G H++ ++ G+VY+ G GQ
Sbjct: 203 YGQCGRKVVENEIYSESHRVHRMQDFDGQVVQVACGQDHSLFLTDKGEVYSCGWGADGQT 262
Query: 385 GTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG-LGDV 443
G G + P L L V+ V+ ++ DG +F WG ++Y QL + D
Sbjct: 263 GLGHYNITSSPTKLGG-DLAGVNVIQVATYGDCCLAVSADGGLFGWGNSEYLQLASVTDS 321
Query: 444 IDRNIPSQVTIEGC-VPRNVACG 465
N+P + G R ACG
Sbjct: 322 TQVNVPRCLHFSGVGKVRQAACG 344
Score = 37.4 bits (85), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 120/320 (37%), Gaps = 46/320 (14%)
Query: 30 ILSPLVVRLPLTVGSAWRDVCGGGCGFA--MAISDSRKLITWGSTD--DLGQSYVTSGKH 85
+L P V LPL R V CG A + ++D + + G+ G+ V + +
Sbjct: 158 VLEPSPVSLPLDRPQETR-VLQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVVENEIY 216
Query: 86 GEIPEPFPLPT-EASIVKAAAGWAHCVAVTEGGEVYTWGWKECVPSGR-VFGDLSTGTGL 143
E + + +V+ A G H + +T+ GEVY+ GW +G + S+ T L
Sbjct: 217 SESHRVHRMQDFDGQVVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSSPTKL 276
Query: 144 DKDVFERQSSFLTEQVSPRSQVSRSSGGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSS 203
D+ + QV+ + G G G+ E Q A + S
Sbjct: 277 GGDL----AGVNVIQVATYGDCCLAV-SADGGLFGWGNSE----------YLQLASVTDS 321
Query: 204 GDENLSAFPCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVS 263
N+ CL G ++ A GG L+ G V+ WGY G LG G + +
Sbjct: 322 TQVNVPR--CLHFSGVG-KVRQAACGGTGCAVLNGEGHVFVWGY---GILGKGPNLVESA 375
Query: 264 SPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLT 323
P IP + +G P V I CG H A +T+ G L
Sbjct: 376 VPEMIP--PTLFGLTEFN----------------PEIQVSRIRCGLSHFAALTNKGELFV 417
Query: 324 FGWGLYGQCGQGSTDDELSP 343
+G + G G G +D+ P
Sbjct: 418 WGKNIRGCLGIGRLEDQYFP 437
Score = 33.9 bits (76), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 13/83 (15%)
Query: 214 LVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGS--------RIRMVSSP 265
L NP ++++ + G H AL++ G+++ WG G LG+G R+ M P
Sbjct: 387 LTEFNPEIQVSRIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGEP 446
Query: 266 HPIPCIESSYGKDRSAALSRGSV 288
+ C G D L++ +
Sbjct: 447 VDVAC-----GVDHMVTLAKSFI 464
>sp|P25171|RCC1_DROME Regulator of chromosome condensation OS=Drosophila melanogaster
GN=Bj1 PE=1 SV=2
Length = 547
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 85/160 (53%), Gaps = 14/160 (8%)
Query: 319 GALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGI-QIEGVAAGLWHTICISSDGDVYAFG 377
G +L G G GQ G G +D L +S + GI ++AG H + ++ GD+Y+FG
Sbjct: 42 GNVLVCGNGDVGQLGLG--EDILERKRLSPVAGIPDAVDISAGGMHNLVLTKSGDIYSFG 99
Query: 378 GNQFGQLG--TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWG--WN 433
N G LG T D +E+ P L+D P + +S G H+A + +DG+VF WG +
Sbjct: 100 CNDEGALGRDTSEDGSESKPDLIDLPG----KALCISAGDSHSACLLEDGRVFAWGSFRD 155
Query: 434 KYGQLGLGDVIDRNIPSQVTI-EGCVPRNVACGWWHTLLL 472
+G +GL ID N + + + EG V ++A G H ++L
Sbjct: 156 SHGNMGL--TIDGNKRTPIDLMEGTVCCSIASGADHLVIL 193
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 101/261 (38%), Gaps = 48/261 (18%)
Query: 226 VAAGGRHTLALSDIGQVWGWGYGGEGQLGLG-------SRIRMVSSPHPIPCIESSYGKD 278
++AGG H L L+ G ++ +G EG LG S+ ++ P CI S G
Sbjct: 79 ISAGGMHNLVLTKSGDIYSFGCNDEGALGRDTSEDGSESKPDLIDLPGKALCI--SAGDS 136
Query: 279 RSAAL--------------SRGSV------NSEGPGFRVPGNYVKGIACGGRHSAVITDA 318
SA L S G++ N P + G IA G H ++T A
Sbjct: 137 HSACLLEDGRVFAWGSFRDSHGNMGLTIDGNKRTPIDLMEGTVCCSIASGADHLVILTTA 196
Query: 319 GALLTFGWGLYGQCGQGS-----------TDDELSPNCVSSLLGIQIEGVAAGLWHTICI 367
G + T G GQ G+ S D L P + E + A + T
Sbjct: 197 GKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLLRPTQLIITRAKPFEAIWATNYCTFMR 256
Query: 368 SSDGDV-YAFGGNQFGQLG--TGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADD 424
S V +A G N F QL T G + P + + + ++ G HT ++ D
Sbjct: 257 ESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTELKDI-----RHIAGGQHHTVILTTD 311
Query: 425 GKVFCWGWNKYGQLGLGDVID 445
K G +YG+LGLGDV D
Sbjct: 312 LKCSVVGRPEYGRLGLGDVKD 332
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 96/232 (41%), Gaps = 26/232 (11%)
Query: 215 VTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESS 274
+ L G ++A+G H + L+ G+V+ G +GQLG S R +S E
Sbjct: 172 IDLMEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGRLSE-RSISG-------EGR 223
Query: 275 YGKDRSAALSRGSVNSEGPGFRV-PGNYVKGIACGGRHSAVITDAGALLTFGWGLYGQCG 333
GK ++ + P + NY + R S + G + Q
Sbjct: 224 RGKRDLLRPTQLIITRAKPFEAIWATNYCTFM----RESQT----QVIWATGLNNFKQLA 275
Query: 334 QGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAET 393
+ E + + + L I +A G HT+ +++D G ++G+LG G
Sbjct: 276 HETKGKEFALTPIKTELK-DIRHIAGGQHHTVILTTDLKCSVVGRPEYGRLGLG-----D 329
Query: 394 LPRLLDAPSLENVHSK---SVSCGARHTAVIADDGKVFCWGWNKYGQLGLGD 442
+ +++ P++ ++ SV CG + + DGK++ WG QLG+GD
Sbjct: 330 VKDVVEKPTIVKKLTEKIVSVGCGEVCSYAVTIDGKLYSWGSGVNNQLGVGD 381
Score = 40.0 bits (92), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 61/152 (40%), Gaps = 15/152 (9%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
++ IA G H+ ++T G YG+ G G D + + L +I V G
Sbjct: 295 IRHIAGGQHHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTEKIVSVGCGE 354
Query: 362 WHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVI 421
+ ++ DG +Y++G QLG G E P ++ + + + H S G +H
Sbjct: 355 VCSYAVTIDGKLYSWGSGVNNQLGVGDGDDELEPIVVVSKNTQGKHMLLASGGGQHA--- 411
Query: 422 ADDGKVFCWGWNKYGQLGLGDVIDRNIPSQVT 453
+F +K Q N+P +V+
Sbjct: 412 -----IFLVKADKQDQ-------KENVPVKVS 431
>sp|Q54X24|RCCDA_DICDI RCC1 domain-containing protein DDB_G0279253 OS=Dictyostelium
discoideum GN=DDB_G0279253 PE=4 SV=1
Length = 512
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 31/153 (20%)
Query: 352 IQIEGVAAGLWHTICISSDGDVYAFGGNQFGQLGT--GGDQAETL-----------PRLL 398
I+I V+ G+ H+I +SS+ DVY +G N+FGQL G+ ++ P +
Sbjct: 231 IRIVSVSCGMRHSIALSSENDVYGWGCNKFGQLSNLIDGNSLKSNNNNNNINDIADPMVQ 290
Query: 399 DAPSLENVHSK----SVSCGARHTAVIADDGK-VFCWGWNKYGQLGLGDVIDRNIPSQVT 453
D+P L N ++ +SCG +HT ++ + K V +G NK+GQLG G+ ID++ P +
Sbjct: 291 DSPKLINFKNEIKIIQISCGFQHTLLLDINFKNVLSFGQNKFGQLGNGNFIDQSNPCVID 350
Query: 454 IEGCV-------------PRNVACGWWHTLLLA 473
I + + + CGW ++ LL
Sbjct: 351 ISSFILPTSTSKSLNDIKIKEIQCGWSNSCLLT 383
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 115/258 (44%), Gaps = 44/258 (17%)
Query: 215 VTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESS 274
+ N +RI +V+ G RH++ALS V+GWG GQL ++ ++
Sbjct: 225 ILFNNKIRIVSVSCGMRHSIALSSENDVYGWGCNKFGQLS-----NLIDGNSLKSNNNNN 279
Query: 275 YGKDRSAALSRGSVNSEGPGFRVPGNYVK--GIACGGRHSAVI-TDAGALLTFGWGLYGQ 331
D + + + S P N +K I+CG +H+ ++ + +L+FG +GQ
Sbjct: 280 NINDIADPMVQDS-----PKLINFKNEIKIIQISCGFQHTLLLDINFKNVLSFGQNKFGQ 334
Query: 332 CGQGSTDDELSPNCV-------------SSLLGIQIEGVAAGLWHTICISSDGD-VYAFG 377
G G+ D+ +P CV SL I+I+ + G W C+ ++ D +Y G
Sbjct: 335 LGNGNFIDQSNP-CVIDISSFILPTSTSKSLNDIKIKEIQCG-WSNSCLLTNQDKLYICG 392
Query: 378 GNQFGQLGTGGDQA-----ETLPRLLDAPSLENVHSKSVSCGARHTAV----------IA 422
++G LG D + +LL++ S K+ S G+ H +
Sbjct: 393 RGEYGILGDNRDLSLDNSNSNQFKLLNSESFNENKIKNFSIGSEHILIQVYSNDNNNNNN 452
Query: 423 DDGKVFCWGWNKYGQLGL 440
++ ++ +GWN++ QLGL
Sbjct: 453 NNNNIYSFGWNEHYQLGL 470
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 70/150 (46%), Gaps = 29/150 (19%)
Query: 320 ALLTFGWGLYGQCGQGSTDDELS-PNCVSSLLGIQ----IEGVAAGLWHTICISSDGDVY 374
+ ++G G GQ G G+TDD +S P V G + + + G H++ I +GD+Y
Sbjct: 2 KIYSWGSGNLGQLGIGNTDDSVSTPTLVLPPDGKKDYEIVNDIVGGGCHSMMIIDNGDLY 61
Query: 375 AFGGNQFGQLGTGGDQA------------------------ETLPRLLDAPSLENVHSKS 410
FG N GQLG ++ +T+P +L+ + ++ K+
Sbjct: 62 TFGSNDSGQLGINSNEQQQQQQQQQQQQQQQQQQQQQQQQYQTIPTILNYFKINSIKIKN 121
Query: 411 VSCGARHTAVIADDGKVFCWGWNKYGQLGL 440
S G H+ ++G ++ WG N +GQLG+
Sbjct: 122 CSGGWAHSLACDNNGNIYSWGSNSHGQLGI 151
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 20/100 (20%)
Query: 395 PRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLG--------------- 439
P+L++ + SVSCG RH+ ++ + V+ WG NK+GQL
Sbjct: 220 PKLIEILFNNKIRIVSVSCGMRHSIALSSENDVYGWGCNKFGQLSNLIDGNSLKSNNNNN 279
Query: 440 ----LGDVIDRNIPSQVTIEGCVP-RNVACGWWHTLLLAV 474
+ D + ++ P + + + ++CG+ HTLLL +
Sbjct: 280 NINDIADPMVQDSPKLINFKNEIKIIQISCGFQHTLLLDI 319
Score = 32.7 bits (73), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 24/44 (54%)
Query: 221 VRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSS 264
++I + G H+LA + G ++ WG GQLG+ + + S+
Sbjct: 117 IKIKNCSGGWAHSLACDNNGNIYSWGSNSHGQLGIDTTCSLNST 160
>sp|Q9UGK8|SRGEF_HUMAN Secretion-regulating guanine nucleotide exchange factor OS=Homo
sapiens GN=SERGEF PE=1 SV=2
Length = 458
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 77/184 (41%), Gaps = 34/184 (18%)
Query: 251 GQLGLGSRIRMVSSPHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGR 310
GQLGLG + ++ +P + + K RS V+ I GG
Sbjct: 26 GQLGLGHKEDVL-----LPQQLNDFCKPRS---------------------VRRITGGGG 59
Query: 311 HSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGLWHTICISSD 370
HSAV+TD G L G GQ G G T+D SL G I+ VA G TI ++ +
Sbjct: 60 HSAVVTDGGDLFVCGLNKDGQLGLGHTEDIPYFTPCKSLFGCPIQQVACGWDFTIMLTEN 119
Query: 371 GDVYAFGGNQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSC---GARHTAVIADDGKV 427
G V + G N FGQLG PR P +H + V C G RH G V
Sbjct: 120 GQVLSCGSNSFGQLGVPHG-----PRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGIV 174
Query: 428 FCWG 431
F WG
Sbjct: 175 FQWG 178
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 77/194 (39%), Gaps = 57/194 (29%)
Query: 302 VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAGL 361
V+ I GG HSAV+TD G L G GQ G G T+D SL G I+ VA G
Sbjct: 51 VRRITGGGGHSAVVTDGGDLFVCGLNKDGQLGLGHTEDIPYFTPCKSLFGCPIQQVACGW 110
Query: 362 WHTICISSDGDVYAFGGNQFG--------------------------------------- 382
TI ++ +G V + G N FG
Sbjct: 111 DFTIMLTENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIELHKEKVVCIAAGLRHAVAATA 170
Query: 383 -----QLGTGGDQA-------ETLPRLLDA--PS----LENVHSKSVSCGARHTAVIADD 424
Q GTG +TLP A PS LEN + V G+ H+A + D
Sbjct: 171 SGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDA 230
Query: 425 GKVFCWGWNKYGQL 438
G+V+ WG NK+GQL
Sbjct: 231 GEVYVWGSNKHGQL 244
Score = 62.4 bits (150), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 100/245 (40%), Gaps = 44/245 (17%)
Query: 206 ENLSAF-PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSS 264
E++ F PC G I VA G T+ L++ GQV G GQLG+ R
Sbjct: 87 EDIPYFTPCKSLF--GCPIQQVACGWDFTIMLTENGQVLSCGSNSFGQLGVPHGPRRCVV 144
Query: 265 PHPIPCIESSYGKDRSAALSRGSVNSEGPGFRVPGNYVKGIACGGRHSAVITDAGALLTF 324
P I + V IA G RH+ T +G + +
Sbjct: 145 PQAI---------------------------ELHKEKVVCIAAGLRHAVAATASGIVFQW 177
Query: 325 GWGLYGQCGQ----GSTDDEL----SPNCVSSLLGIQIEGVAAGLWHTICISSDGDVYAF 376
G GL CG+ G T P+ V+ L + V AG H+ ++ G+VY +
Sbjct: 178 GTGL-ASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVW 236
Query: 377 GGNQFGQLGTGGDQAETL--PRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNK 434
G N+ GQL ++A L P+ ++A +N ++ G H + GK+F WG
Sbjct: 237 GSNKHGQL---ANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRAD 293
Query: 435 YGQLG 439
YGQLG
Sbjct: 294 YGQLG 298
Score = 55.8 bits (133), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 3/113 (2%)
Query: 329 YGQCGQGSTDDELSPNCVSSLLGIQ-IEGVAAGLWHTICISSDGDVYAFGGNQFGQLGTG 387
YGQ G G +D L P ++ + + + G H+ ++ GD++ G N+ GQLG G
Sbjct: 25 YGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTDGGDLFVCGLNKDGQLGLG 84
Query: 388 GDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQLGL 440
E +P SL + V+CG T ++ ++G+V G N +GQLG+
Sbjct: 85 --HTEDIPYFTPCKSLFGCPIQQVACGWDFTIMLTENGQVLSCGSNSFGQLGV 135
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 53/97 (54%), Gaps = 6/97 (6%)
Query: 379 NQFGQLGTGGDQAETLPRLLDAPSLENVHSKSVSCGARHTAVIADDGKVFCWGWNKYGQL 438
N +GQLG G + LP+ L+ + + ++ G H+AV+ D G +F G NK GQL
Sbjct: 23 NSYGQLGLGHKEDVLLPQQLN-DFCKPRSVRRITGGGGHSAVVTDGGDLFVCGLNKDGQL 81
Query: 439 GLGDVIDRNIPSQV---TIEGCVPRNVACGWWHTLLL 472
GLG D IP ++ GC + VACGW T++L
Sbjct: 82 GLGHTED--IPYFTPCKSLFGCPIQQVACGWDFTIML 116
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 133/367 (36%), Gaps = 65/367 (17%)
Query: 47 RDVCGGGCGFAMAISDSRKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTE--ASIVKAA 104
R + GGG G + ++D L G D GQ + G +IP P + I + A
Sbjct: 52 RRITGGG-GHSAVVTDGGDLFVCGLNKD-GQ--LGLGHTEDIPYFTPCKSLFGCPIQQVA 107
Query: 105 AGWAHCVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQV-SPRS 163
GW + +TE G+V + G FG L G + V + E+V +
Sbjct: 108 CGWDFTIMLTENGQVLSCG-------SNSFGQLGVPHGPRRCVVPQAIELHKEKVVCIAA 160
Query: 164 QVSRSSGGTSSGTDGR-GSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVR 222
+ + T+SG + G+G RR QT + E P VT +
Sbjct: 161 GLRHAVAATASGIVFQWGTGLASCGRRLC--PGQTLPLFFTAKE-----PSRVTGLENSK 213
Query: 223 IATVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIES--------- 273
V AG H+ +L+D G+V+ WG GQL + V C ++
Sbjct: 214 AMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANEAAFLPVPQKIEAHCFQNEKVTAIWSG 273
Query: 274 --------------SYGKDRSAALSRGSVNSEG----------PGFRVPGNY-------- 301
++G+ L R EG P R P +
Sbjct: 274 WTHLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRPPNSMPSSPHCLT 333
Query: 302 -VKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIQIEGVAAG 360
++CG H+ I G ++GW +G CG G+ + +P V +LL V G
Sbjct: 334 GATEVSCGSEHNLAII-GGVCYSWGWNEHGMCGDGTEANVWAPKPVQALLSSSGLLVGCG 392
Query: 361 LWHTICI 367
H++ +
Sbjct: 393 AGHSLAL 399
>sp|P52499|RCC1_CANAX Protein RCC1 OS=Candida albicans GN=RCC1 PE=3 SV=1
Length = 464
Score = 69.3 bits (168), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 114/278 (41%), Gaps = 44/278 (15%)
Query: 212 PCLVTLNPGVRIATVAAGGRHTLALSDIGQVWGWG--YGGEGQLG-LGSRIRMVSSPHPI 268
P LV P I +AA + AL G V+ WG EG LG L I++ +P I
Sbjct: 135 PALVENLPEGEIVQLAATDNLSAALLSNGDVYSWGCFRCNEGLLGFLRDEIKLQKTPLKI 194
Query: 269 PCIESSYGKDRSAALSRGSVNSE-------GPGFRV--------------PGNY----VK 303
++ RS + +++S+ G +++ P + +K
Sbjct: 195 KELKKHCPIMRSVKIILLALDSKEWMPGVNGQQYQLGRRILERHRYRSLEPQQFGLYNIK 254
Query: 304 GIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDEL-------SPNCVSSLLGIQIEG 356
IA G H I + + +G YGQC + EL P + L I+
Sbjct: 255 YIASGDFHCFAIDHSHNVYAWGLNQYGQCALTGDNGELEDGSVLMKPTLIPELSHKGIKE 314
Query: 357 VAAGLWHTICISSDGDVYAFGGNQFGQLGTGGDQAETLPRLLDA---------PSLENVH 407
+AAG HT+ ++ DG VYA+G ++G D+ ++ +L V
Sbjct: 315 IAAGEHHTLALTEDGQVYAWGRYDMKEIGIPKDKLPKSTFKINTGTHGSFSFLQNLFAVK 374
Query: 408 SKSVSCGARHTAVIADDGKVFCWGWNKYGQLGLGDVID 445
K++ G+ H+ + +DG V+ WG+ + GLG ID
Sbjct: 375 IKTIGVGSHHSFAVTEDGVVYAWGFAETYGPGLGPSID 412
Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 82/219 (37%), Gaps = 70/219 (31%)
Query: 58 MAISDSRKLITWGSTDDLGQSYVTSGKHGEI--------PEPFPLPTEASIVKAAAGWAH 109
AI S + WG + GQ +T G +GE+ P P + I + AAG H
Sbjct: 264 FAIDHSHNVYAWG-LNQYGQCALT-GDNGELEDGSVLMKPTLIPELSHKGIKEIAAGEHH 321
Query: 110 CVAVTEGGEVYTWGWKECVPSGRVFGDLSTGTGLDKDVFERQSSFLTEQVSPRSQVSRSS 169
+A+TE G+VY WG + + E P+ ++ +S+
Sbjct: 322 TLALTEDGQVYAWGRYD----------------------------MKEIGIPKDKLPKST 353
Query: 170 GGTSSGTDGRGSGEEGSKRRRISLAKQTAESSSSGDENLSAFPCLVTLNPGVRIATVAAG 229
++GT G S S +NL A V+I T+ G
Sbjct: 354 FKINTGTHG----------------------SFSFLQNLFA----------VKIKTIGVG 381
Query: 230 GRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPI 268
H+ A+++ G V+ WG+ GLG I V P I
Sbjct: 382 SHHSFAVTEDGVVYAWGFAETYGPGLGPSIDDVEKPTRI 420
Score = 32.7 bits (73), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 220 GVRIATVAAGGRHTLALSDIGQVWGWG 246
G +I A GG HTLAL ++W WG
Sbjct: 64 GTKIVDFAVGGMHTLALDGKNRIWSWG 90
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.136 0.431
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 199,362,364
Number of Sequences: 539616
Number of extensions: 9256646
Number of successful extensions: 25130
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 23378
Number of HSP's gapped (non-prelim): 766
length of query: 477
length of database: 191,569,459
effective HSP length: 121
effective length of query: 356
effective length of database: 126,275,923
effective search space: 44954228588
effective search space used: 44954228588
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)