BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011776
(477 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q84W91|C3H32_ARATH Zinc finger CCCH domain-containing protein 32 OS=Arabidopsis
thaliana GN=At2g47850 PE=2 SV=2
Length = 468
Score = 633 bits (1633), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/477 (70%), Positives = 390/477 (81%), Gaps = 15/477 (3%)
Query: 3 LYGRNNTSRNGSQSGHQPQWSPTDQATGLEESMWQSDLKVNESYPQRHGVPDCVFYMRTG 62
+Y RN NGSQS P W+P D TGL+ESMW+ L ++SYP+R G PDC +YMRTG
Sbjct: 1 MYARN-PPLNGSQSAQAPDWTPADADTGLQESMWRLGLG-SDSYPERPGAPDCAYYMRTG 58
Query: 63 VCGYGDRCRYNHPRNRAAVEAAVRATGDYPDRPGEPICQFYLKTGTCKFGASCKFHHPKH 122
VCGYG+RCRYNHPR+RA+VEA VRATG YP+R GEP CQFYLKTGTCKFGASCKFHHPK+
Sbjct: 59 VCGYGNRCRYNHPRDRASVEATVRATGQYPERFGEPPCQFYLKTGTCKFGASCKFHHPKN 118
Query: 123 SGGSMSHVPLNIYGYPLRPGEKECSYYLKTGQCKFGITCKFHHPQPAGTSL---PASAPQ 179
+GGSMSHVPLNIYGYP+R G+ ECSYYLKTGQCKFGITCKFHHPQPAGT++ PASAPQ
Sbjct: 119 AGGSMSHVPLNIYGYPVREGDNECSYYLKTGQCKFGITCKFHHPQPAGTTVPPPPASAPQ 178
Query: 180 FYPPVQSPTVPMAEQYGGASTSLRVARPPLLASSYVQGAYGPVLFSPGVVPFSGWNPYSA 239
FYP VQS M +QYGG S+SLRVAR LL SY+QGAYGP+L +PGVVP GW+PYSA
Sbjct: 179 FYPSVQS---LMPDQYGGPSSSLRVAR-TLLPGSYMQGAYGPMLLTPGVVPIPGWSPYSA 234
Query: 240 SVSPVLSPGAQPAVGATSLYGVTQISSSMPALAGLYPSLPSSAGPSSSGQMEQSFPERPG 299
VSP LSPGAQ AVGATSLYGVTQ++S+ P+L G+YPSL S P+ Q EQ+FPERPG
Sbjct: 235 PVSPALSPGAQHAVGATSLYGVTQLTSTTPSLPGVYPSLSS---PTGVIQKEQAFPERPG 291
Query: 300 EPECQYFLKTGDCKFGSSCRFHHPRDRVVPRTNCALSPLGLPLRPGAQPCTFYLQNGRCK 359
EPECQY+LKTGDCKFG+SC+FHHPRDRV PR NC LSP+GLPLRPG Q CTFY+QNG CK
Sbjct: 292 EPECQYYLKTGDCKFGTSCKFHHPRDRVPPRANCVLSPIGLPLRPGVQRCTFYVQNGFCK 351
Query: 360 FGATCKFDHPMGAMRYSPSASSLIETPVAPYPVGSLLSTLAPASSSSDLRPELISGSKKD 419
FG+TCKFDHPMG +RY+PSASSL + PVAPYPV SLL LA A SSS ELI+G KD
Sbjct: 352 FGSTCKFDHPMGTIRYNPSASSLADAPVAPYPVSSLLGALAAAPSSSST--ELIAGGAKD 409
Query: 420 SLLSRIPSSGNTSSSSVGLIFSQT-GSVPLSDLQLSGQSSVPLSSSRSARQGVEVRR 475
+ ++ +P+S +TS+ S GLIFSQ+ GS+P S+LQLS QSS+PL+ SR RQG E+RR
Sbjct: 410 AYMTGVPTSRSTSNISAGLIFSQSGGSIPFSELQLSSQSSLPLTGSRITRQGREIRR 466
>sp|Q5NAW2|C3H6_ORYSJ Zinc finger CCCH domain-containing protein 6 OS=Oryza sativa subsp.
japonica GN=Os01g0258700 PE=2 SV=2
Length = 476
Score = 420 bits (1080), Expect = e-116, Method: Compositional matrix adjust.
Identities = 219/451 (48%), Positives = 295/451 (65%), Gaps = 30/451 (6%)
Query: 29 TGLEESMWQSDLKVNES---------------YPQRHGVPDCVFYMRTGVCGYGDRCRYN 73
TGLE MW+ L P+R G DCV+Y+RTG CG+GDRCRYN
Sbjct: 24 TGLEGPMWRMGLGGGGGGGGGGGGGDGDAAGRLPERPGEEDCVYYLRTGACGFGDRCRYN 83
Query: 74 HPRNRAAVE----AAVRATGDYPDRPGEPICQFYLKTGTCKFGASCKFHHPKHSGGSMSH 129
HPR+R E A A DYP+R G+PIC++Y+KTGTCKFG +CK+HHPK G +
Sbjct: 84 HPRDRGGTEFGGGARNAAALDYPERAGQPICEYYMKTGTCKFGTNCKYHHPKQDGAVLP- 142
Query: 130 VPLNIYGYPLRPGEKECSYYLKTGQCKFGITCKFHHPQPAGTSLPASAPQFYPPVQSPTV 189
V LN G+P+R GEKECSYY+KTGQCKFG TCKFHHP+ G + P YPP+QSP++
Sbjct: 143 VMLNNSGFPIRLGEKECSYYMKTGQCKFGTTCKFHHPEFGGVPM---TPGIYPPLQSPSI 199
Query: 190 PMAEQYGGASTSLRVARPPLLASSYVQGAYGPVLFSPGVVPFSGWNPYSASVSPVLSPGA 249
Y + + ++ RPP++ SY+ G+Y P++ S G++P GW+PY ASV+PV+S GA
Sbjct: 200 ASPHPYASLA-NWQMGRPPVVPGSYIPGSYTPMMLSSGMIPLQGWSPYPASVNPVVSGGA 258
Query: 250 QPAVGATSLYGVTQI-SSSMPALAGLYPSLPSSAGPSSSGQMEQSFPERPGEPECQYFLK 308
Q V A +YG+ SSS A G Y SS G SS+ Q E FPERPG+P+CQY+++
Sbjct: 259 QQNVQAGPVYGMGHHGSSSTIAYGGPYVPYASSTGQSSNNQQEHGFPERPGQPDCQYYMR 318
Query: 309 TGDCKFGSSCRFHHPRDRVVPRTNCALSPLGLPLRPGAQPCTFYLQNGRCKFGATCKFDH 368
TGDCKFG++C++HHPR+ P++ ++ L LPLRPGAQPC +Y QNG C++G CK+DH
Sbjct: 319 TGDCKFGATCKYHHPRELSAPKSGYMVNSLCLPLRPGAQPCAYYAQNGYCRYGVACKYDH 378
Query: 369 PMGAMRYSPSASSLIETPVAPYPVGSLLSTLAPASSSSDLRPELISGSKKDSLLSRIPSS 428
PMG + YSPSA L + P+APYP+G ++TLAP+S S DLRPE I S KD ++++ +S
Sbjct: 379 PMGTLGYSPSALPLSDMPIAPYPIGFSIATLAPSSPSPDLRPEYI--STKDQSVNQV-TS 435
Query: 429 GNTSSSSVGLIFSQTGSVPLSDLQLSGQSSV 459
+S VG I + G P +D + Q++
Sbjct: 436 PVAASEPVGSILPK-GVFP-ADTMMRAQTNT 464
>sp|Q6NPN3|C3H58_ARATH Zinc finger CCCH domain-containing protein 58 OS=Arabidopsis
thaliana GN=At5g18550 PE=2 SV=1
Length = 465
Score = 414 bits (1064), Expect = e-115, Method: Compositional matrix adjust.
Identities = 233/457 (50%), Positives = 305/457 (66%), Gaps = 40/457 (8%)
Query: 1 MELYGRNNTSRNGSQSGHQPQWSPTDQATGLEESMWQSDLKVN----ESYPQRHGVPDCV 56
ME YG + S H+ WS TG+E SMW+ L+ E++P+R PDC+
Sbjct: 1 MERYGGAGEDESRSDPSHE--WSAQGTETGIEASMWRLGLRGGGGGGETFPERPDEPDCI 58
Query: 57 FYMRTGVCGYGDRCRYNHPRNRAAVEAAVRA-TGDYPDRPGEPICQFYLKTGTCKFGASC 115
+Y+RTGVCGYG RCR+NHPRNRA V +R G++P+R G+P+CQ +++TGTCKFGASC
Sbjct: 59 YYLRTGVCGYGSRCRFNHPRNRAPVLGGLRTEAGEFPERMGQPVCQHFMRTGTCKFGASC 118
Query: 116 KFHHPKHSGG--SMSHVPLNIYGYPLRPGEKECSYYLKTGQCKFGITCKFHHPQPAGTSL 173
K+HHP+ GG S++ V LN G+PLRPGEKECSY+++TGQCKFG TC++HHP P G
Sbjct: 119 KYHHPRQGGGGDSVTPVSLNYMGFPLRPGEKECSYFMRTGQCKFGSTCRYHHPVPPGVQA 178
Query: 174 P--------ASAPQFYPPVQSPTVPMAEQYGGASTSLRVARPPLLASSYVQG--AYGPVL 223
P ++ P YP +QS TVP ++QYG + +ARP LL SYVQ YG ++
Sbjct: 179 PSQQQQQQLSAGPTMYPSLQSQTVPSSQQYG-----VVLARPQLLPGSYVQSPYGYGQMV 233
Query: 224 FSPGVVPFSGWNPYSASVSPVLSPGAQPAVGATSLYGVTQISSSMPALAGLYPSLPSSAG 283
PG+VP+SGWNPY ASVS + SPG QP++G +S+YG+T +S S PA Y S PSS G
Sbjct: 234 LPPGMVPYSGWNPYQASVSAMPSPGTQPSMGTSSVYGITPLSPSAPA----YQSGPSSTG 289
Query: 284 PSSSGQMEQSFPERPGEPECQYFLKTGDCKFGSSCRFHHPRDRVVPRTNCALSPLGLPLR 343
S+ EQ+FP+RP +PECQYF++TGDCKFG+SCRFHHP + P + LS +GLPLR
Sbjct: 290 VSNK---EQTFPQRPEQPECQYFMRTGDCKFGTSCRFHHPMEAASPEAS-TLSHIGLPLR 345
Query: 344 PGAQPCTFYLQNGRCKFGATCKFDHPMGAMRYSPSASSLIET--PVAPYPVGSLLSTLAP 401
PGA PCT + Q+G CKFG CKFDH +G+ S S S T PVAPYP S L TLAP
Sbjct: 346 PGAVPCTHFAQHGICKFGPACKFDHSLGSSSLSYSPSPSSLTDMPVAPYP--SSLGTLAP 403
Query: 402 ASSSSDLRPELISGSKKDSLLSRIPSSGNTSSSSVGL 438
SSSSD ELIS S + + + ++G + + + G+
Sbjct: 404 -SSSSDQCTELISSSSIEPITT---TTGGSETVAAGV 436
>sp|Q5NAV3|C3H5_ORYSJ Zinc finger CCCH domain-containing protein 5 OS=Oryza sativa subsp.
japonica GN=Os01g0257400 PE=2 SV=1
Length = 466
Score = 396 bits (1018), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/403 (51%), Positives = 268/403 (66%), Gaps = 26/403 (6%)
Query: 29 TGLEESMWQ----------SDLKVNESYPQRHGVPDCVFYMRTGVCGYGDRCRYNHPRNR 78
TGLEESMW+ + P+R G DCV+Y+RTG CGYG+ CRYNHPR+R
Sbjct: 21 TGLEESMWRMGLGGGGGGGGEAVAAGRLPERPGEADCVYYLRTGACGYGENCRYNHPRDR 80
Query: 79 AAVEAAVRATG-------DYPDRPGEPICQFYLKTGTCKFGASCKFHHPKHSGGSMSHVP 131
AA AAV G +YP+RPG+P+C++Y+K GTCKFG++CK+ HP+ GS+ V
Sbjct: 81 AA--AAVLNGGGKTTHSAEYPERPGQPVCEYYMKNGTCKFGSNCKYDHPRE--GSVQAVM 136
Query: 132 LNIYGYPLRPGEKECSYYLKTGQCKFGITCKFHHPQPAGTSLPASAPQFYPPVQSPTVPM 191
LN GYPLR GEK+C+YY+KTG CKFG TCKFHHP+ G S P YPPVQ +
Sbjct: 137 LNSSGYPLRSGEKDCTYYVKTGHCKFGSTCKFHHPEIGGVS---ETPNMYPPVQPQPISS 193
Query: 192 AEQYGGASTSLRVARPPLLASSYVQGAYGPVLFSPGVVPFSGWNPYSASVSPVLSPGAQP 251
+ Y + ++ RPP+L S++ G+Y P++ VVP GWNPY + V+ V S G
Sbjct: 194 SHPYQHLA-GWQMGRPPVLPGSFLSGSYPPMMLPSTVVPMQGWNPYISPVNQVASAGGHQ 252
Query: 252 AVGATSLYGVTQISSSMPALAG-LYPSLPSSAGPSSSGQMEQSFPERPGEPECQYFLKTG 310
V A YG++ S G Y L SS PSSS + E +FP RPG+PECQY+LKTG
Sbjct: 253 TVQAGPFYGLSHQGPSAAVTYGSQYAPLSSSTMPSSSSKQEPAFPARPGQPECQYYLKTG 312
Query: 311 DCKFGSSCRFHHPRDRVVPRTNCALSPLGLPLRPGAQPCTFYLQNGRCKFGATCKFDHPM 370
CKFGS+C++HHP+ P++NC LSPLGLPLRPG+QPC +Y Q+G CKFG TCKFDHPM
Sbjct: 313 SCKFGSACKYHHPQYLNTPKSNCMLSPLGLPLRPGSQPCAYYTQHGFCKFGPTCKFDHPM 372
Query: 371 GAMRYSPSASSLIETPVAPYPVGSLLSTLAPASSSSDLRPELI 413
G + YSPSASS+ + P+APYP+ ++ +AP SSSSDLRPE +
Sbjct: 373 GTLSYSPSASSITDLPIAPYPLNYAVAPVAPPSSSSDLRPEYL 415
>sp|Q9SQU4|C3H34_ARATH Zinc finger CCCH domain-containing protein 34 OS=Arabidopsis
thaliana GN=At3g06410 PE=2 SV=2
Length = 462
Score = 379 bits (974), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/416 (51%), Positives = 274/416 (65%), Gaps = 37/416 (8%)
Query: 1 MELYGRNNTSRNGSQSGHQPQWSPTDQATGLEESMWQSDLKVN-------ESYPQRHGVP 53
ME YGR GS+S +W+ T +E MW+ L ESYP+R P
Sbjct: 1 MERYGRPG--EEGSRSDPSLEWTSHGGETAVEAPMWRLGLSGGGGGGGGGESYPERPDEP 58
Query: 54 DCVFYMRTGVCGYGDRCRYNHPRNRAAVEAAVRA-TGDYPDRPGEPICQFYLKTGTCKFG 112
DC++Y+RTGVCGYG RCR+NHPR+R AV VR G P+R G P+CQ +++TGTCKFG
Sbjct: 59 DCIYYLRTGVCGYGSRCRFNHPRDRGAVIGGVRGEAGALPERMGHPVCQHFMRTGTCKFG 118
Query: 113 ASCKFHHPKHSGG--SMSHVPLNIYGYPLRPGEKECSYYLKTGQCKFGITCKFHHPQPAG 170
ASCK+HHP+ GG S++ V L+ GYPLRPGEKECSYYL+TGQCKFG+TC+F+HP P
Sbjct: 119 ASCKYHHPRQGGGGGSVAPVSLSYLGYPLRPGEKECSYYLRTGQCKFGLTCRFNHPVPLA 178
Query: 171 TSLPASAP------------QFYPPVQSPTVPMAEQYGGASTSLRVARPPLLASSYVQGA 218
P P YP +QS ++P ++QYG L + RP L SY+Q
Sbjct: 179 VQGPPQQPQQQQPQPQPQLQTIYPTLQSQSIPSSQQYG-----LVLTRPSFLTGSYLQSP 233
Query: 219 YGP-VLFSPGVVPFSGWNPYSASVSPVLSPGAQPAVGATSLYGVTQISSSMPALAGLYPS 277
YGP ++ PG+VP+SGWNPY AS+S + SPG QP++G++S+YG+T +S S A G Y S
Sbjct: 234 YGPPMVLPPGMVPYSGWNPYQASLSAMPSPGTQPSIGSSSIYGLTPLSPSATAYTGTYQS 293
Query: 278 LPSSAGPSSSGQMEQSFPERPGEPECQYFLKTGDCKFGSSCRFHHPRDRVVPRTNCALSP 337
+PSS S + FP+RP +PECQYF++TGDCKFGSSCR+HHP D V P+T LS
Sbjct: 294 VPSSNSTS------KEFPQRPDQPECQYFMRTGDCKFGSSCRYHHPVDAVPPKTGIVLSS 347
Query: 338 LGLPLRPGAQPCTFYLQNGRCKFGATCKFDH-PMGAMRYSPSASSLIETPVAPYPV 392
+GLPLRPG CT + Q+G CKFG CKFDH ++ YSPSASSL + PVAPYP+
Sbjct: 348 IGLPLRPGVAQCTHFAQHGICKFGPACKFDHSMSSSLSYSPSASSLTDMPVAPYPI 403
Score = 90.1 bits (222), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 96/209 (45%), Gaps = 38/209 (18%)
Query: 293 SFPERPGEPECQYFLKTGDCKFGSSCRFHHPRD-----RVVPRTNCALSPLGLPLRPGAQ 347
+ PER G P CQ+F++TG CKFG+SC++HHPR V P +LS LG PLRPG +
Sbjct: 96 ALPERMGHPVCQHFMRTGTCKFGASCKYHHPRQGGGGGSVAP---VSLSYLGYPLRPGEK 152
Query: 348 PCTFYLQNGRCKFGATCKFDHPMGAMRYSPSASSLIETPVAPYPVGSLLSTLAPASSSSD 407
C++YL+ G+CKFG TC+F+HP+ P + P + ++ TL S S
Sbjct: 153 ECSYYLRTGQCKFGLTCRFNHPVPLAVQGPPQQPQQQQPQPQPQLQTIYPTLQSQSIPSS 212
Query: 408 -------LRPELISGSKKDS-----------------------LLSRIPSSGNTSSSSVG 437
RP ++GS S LS +PS G S
Sbjct: 213 QQYGLVLTRPSFLTGSYLQSPYGPPMVLPPGMVPYSGWNPYQASLSAMPSPGTQPSIGSS 272
Query: 438 LIFSQTGSVPLSDLQLSGQSSVPLSSSRS 466
I+ T P + SVP S+S S
Sbjct: 273 SIYGLTPLSPSATAYTGTYQSVPSSNSTS 301
>sp|Q2R4J4|C3H63_ORYSJ Zinc finger CCCH domain-containing protein 63 OS=Oryza sativa
subsp. japonica GN=Os11g0472000 PE=2 SV=2
Length = 444
Score = 355 bits (910), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 189/399 (47%), Positives = 249/399 (62%), Gaps = 24/399 (6%)
Query: 32 EESMWQSDL-KVNES--YPQRHGVPDCVFYMRTGVCGYGDRCRYNHPRNRAAVEAAVRAT 88
EE+MWQ +L + E+ YP+R G PDC +YMRTG+C +G C++NHP +R AA R
Sbjct: 36 EEAMWQMNLGEAMEAGPYPERIGEPDCSYYMRTGLCRFGMTCKFNHPADRKMAVAAARMK 95
Query: 89 GDYPDRPGEPICQFYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGEKECSY 148
G+YP R G+P CQ+YLKTGTCKFGA+CKFHHP+ + V LN GYPLRP EKEC+Y
Sbjct: 96 GEYPQRIGQPECQYYLKTGTCKFGATCKFHHPREKAAIATRVQLNALGYPLRPNEKECAY 155
Query: 149 YLKTGQCKFGITCKFHHPQPAGTSLPASAPQFYPPVQSPTVPMAEQYGGASTSLRVAR-P 207
YL+TGQCKFG TCKFHHPQP+ T + A Y P QS T P Y GA T+ ++R
Sbjct: 156 YLRTGQCKFGSTCKFHHPQPSNTMV-AVRGSVYSPGQSVTSPSQHTYPGAVTNWPLSRSA 214
Query: 208 PLLASSYVQG--AYGPVLFSPGVVPFSGWNPYSASVSPVLSPGAQPAVGATSLYGVTQIS 265
+AS G +Y V+ PG+V GWNPY+A + S Q G Y ++ S
Sbjct: 215 SFIASPRWPGHSSYAQVIVPPGLVQVPGWNPYAAQIGSSSSDDQQRTAGGAQYYTGSRHS 274
Query: 266 SSMPALA--GLYPSLPSSAGPSS--SGQMEQSFPERPGEPECQYFLKTGDCKFGSSCRFH 321
+ P + G++ S + + P + Q E FPERP +PECQ+++KTGDCKFG+ C+FH
Sbjct: 275 ET-PNMGDQGMFSSYQAGSVPLGLYTVQRESIFPERPDQPECQFYMKTGDCKFGAVCKFH 333
Query: 322 HPRDRVVPRTNCALSPLGLPLRPGAQPCTFYLQNGRCKFGATCKFDHPMGAMRYSPSASS 381
HP++R++P NCALS LGLPLRPG CTFY + G CKFG CKFDHPMG + Y
Sbjct: 334 HPKERIIPTPNCALSSLGLPLRPGEPICTFYSRYGICKFGPNCKFDHPMGTVMYG----- 388
Query: 382 LIETPVAPYPVGSLLS--TLAPASSSSDLRPELISGSKK 418
+A P G + + LAP + S++ P+ +SG +
Sbjct: 389 -----LATSPTGDVSARRMLAPVPAHSEVSPDNVSGRSR 422
>sp|Q2QT65|C3H66_ORYSJ Zinc finger CCCH domain-containing protein 66 OS=Oryza sativa
subsp. japonica GN=Os12g0405100 PE=2 SV=1
Length = 454
Score = 346 bits (887), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 179/359 (49%), Positives = 223/359 (62%), Gaps = 11/359 (3%)
Query: 32 EESMWQSDLKVNES-----YPQRHGVPDCVFYMRTGVCGYGDRCRYNHPRNRAAVEAAVR 86
EE+MWQ L ES YP+R G PDC +YMRTG+C +G C++NHP NR AA R
Sbjct: 44 EEAMWQMTLGGGESMESTPYPERIGEPDCSYYMRTGLCRFGMTCKFNHPPNRKLAVAAAR 103
Query: 87 ATGDYPDRPGEPICQFYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGEKEC 146
G+YP R G+P CQ+YLKTGTCKFGA+CKFHHP+ + V LN+ GYP+RP EKEC
Sbjct: 104 MNGEYPYRVGQPECQYYLKTGTCKFGATCKFHHPREKAALANRVQLNVLGYPMRPNEKEC 163
Query: 147 SYYLKTGQCKFGITCKFHHPQPAGTSLPASAPQFYPPVQSPTVPMAEQYGGASTSLRVAR 206
+YYL+TGQCKF TCKFHHPQP+ T + A Y P QS T P Y GA T+ ++R
Sbjct: 164 AYYLRTGQCKFASTCKFHHPQPSNTMV-AVRNSMYSPGQSATSPGQHTYPGAVTNWTLSR 222
Query: 207 -PPLLASSYVQG--AYGPVLFSPGVVPFSGWNPYSASVSPVLSPGAQPAVGATSLYGVTQ 263
+AS G Y V+ G+V GWNPY+A + Q T YG Q
Sbjct: 223 SASFIASPRWPGHSGYAQVIVPQGLVQVPGWNPYAAQMGSSSPDDQQRTPVTTQYYGSRQ 282
Query: 264 ISSSMPALAGLYPSLPSSAGPSS--SGQMEQSFPERPGEPECQYFLKTGDCKFGSSCRFH 321
+ G+Y S + P + Q E FPERP +PECQ+++KTGDCKFG+ C+FH
Sbjct: 283 SETGGMGDHGMYQSYQGGSVPVGVYTVQGENIFPERPDQPECQFYMKTGDCKFGAVCKFH 342
Query: 322 HPRDRVVPRTNCALSPLGLPLRPGAQPCTFYLQNGRCKFGATCKFDHPMGAMRYSPSAS 380
HP++R+VP NCAL+ LGLPLRPG CTFY + G CKFG CKFDHPMG + Y + S
Sbjct: 343 HPKERLVPAPNCALNSLGLPLRPGEPVCTFYSRYGICKFGPNCKFDHPMGTLMYGSATS 401
Score = 40.0 bits (92), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 23/44 (52%)
Query: 47 PQRHGVPDCVFYMRTGVCGYGDRCRYNHPRNRAAVEAAVRATGD 90
P R G P C FY R G+C +G C+++HP +A GD
Sbjct: 362 PLRPGEPVCTFYSRYGICKFGPNCKFDHPMGTLMYGSATSPRGD 405
>sp|Q9SWF9|ZFNL_PEA Zinc finger CCCH domain-containing protein ZFN-like OS=Pisum
sativum PE=2 SV=1
Length = 417
Score = 340 bits (871), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 190/407 (46%), Positives = 242/407 (59%), Gaps = 30/407 (7%)
Query: 32 EESMWQSDLKVNES-----YPQRHGVPDCVFYMRTGVCGYGDRCRYNHPRNRAAVEAAVR 86
+E+MWQ +L+ +E+ YP+ G PDC +Y+RTG+C +G CR+NHP NR A R
Sbjct: 8 QEAMWQMNLRSSETMESGPYPEHPGEPDCSYYIRTGLCRFGATCRFNHPPNRKLAIATAR 67
Query: 87 ATGDYPDRPGEPICQFYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGEKEC 146
G++P+R G+P CQ+YLKTGTCKFGA+C+FHHPK G V LNI GYPLRP E E
Sbjct: 68 MKGEFPERLGQPECQYYLKTGTCKFGATCRFHHPKDKAGVAGRVALNILGYPLRPNESER 127
Query: 147 SYYLKTGQCKFGITCKFHHPQPAGTSLPASAPQFYPPVQSPTVPMAEQYGGASTSLRVAR 206
+YYL+TGQCKFG TCKFHHPQP+ L YP VQSPT P + Y T+
Sbjct: 128 AYYLRTGQCKFGNTCKFHHPQPSNMVLSMRGSTVYPTVQSPTTPGQQSYAAGITNWS--- 184
Query: 207 PPLLASSYV-----QG--AYGPVLFSPGVVPFSGWNPYSASVSPVLSPGAQPAVGATSLY 259
+SSYV QG +Y P++ GVV GW+ Y + S Q + Y
Sbjct: 185 ----SSSYVPSPRWQGPSSYAPLILPQGVVSVPGWSTYGGQMG---SESPQQTMRNDQTY 237
Query: 260 GVT-QISSSMPALAGLYPSLPSSAGPSS--SGQMEQSFPERPGEPECQYFLKTGDCKFGS 316
G + Q L G Y S + P + Q + FPERP +PECQ+++KTGDCKFG+
Sbjct: 238 GTSHQGELENAGLQGAYSQYRSGSVPVGFYALQRDNIFPERPDQPECQFYMKTGDCKFGA 297
Query: 317 SCRFHHPRDRVVPRTNCALSPLGLPLRPGAQPCTFYLQNGRCKFGATCKFDHPMGAMRYS 376
CRFHHPR+R +P +C LSP+GLPLRPG C FY + G CKFG +CKFDHPMG Y+
Sbjct: 298 VCRFHHPRERQIPAPDCVLSPIGLPLRPGEPLCVFYSRYGICKFGPSCKFDHPMGIFTYN 357
Query: 377 PSASSLIETPVAPYPVGSLLSTLAPASSSSDLRPELISGSKKDSLLS 423
AS L +TP +GS T A + SS L + SG+ K LS
Sbjct: 358 -VASPLADTPGRRL-LGSSSGTAALSLSSEGL---VESGTAKPRRLS 399
>sp|Q8GXX7|C3H33_ARATH Zinc finger CCCH domain-containing protein 33 OS=Arabidopsis
thaliana GN=ZFN1 PE=1 SV=1
Length = 397
Score = 319 bits (817), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 171/390 (43%), Positives = 225/390 (57%), Gaps = 36/390 (9%)
Query: 32 EESMWQSDLKVNE-----SYPQRHGVPDCVFYMRTGVCGYGDRCRYNHPRNRAAVEAAVR 86
+++MWQ +L +E SYP+R G PDC +Y+RTG+C +G CR+NHPR+R V A R
Sbjct: 18 QDAMWQMNLSSDETMETGSYPERPGEPDCSYYIRTGLCRFGSTCRFNHPRDRELVIATAR 77
Query: 87 ATGDYPDRPGEPICQFYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGEKEC 146
G+YP+R G+P C++YLKTGTCKFG +CKFHHP++ G V LN+ GYPLR E +C
Sbjct: 78 MRGEYPERIGQPECEYYLKTGTCKFGVTCKFHHPRNKAGIAGRVSLNMLGYPLRSNEVDC 137
Query: 147 SYYLKTGQCKFGITCKFHHPQPAGTSL--PASAPQFYPPVQSPTVPMAEQYGGASTSLRV 204
+Y+L+TG CKFG TCKF+HPQP T++ P S Q YP
Sbjct: 138 AYFLRTGHCKFGGTCKFNHPQPQPTNMMVPTSGQQSYP---------------------W 176
Query: 205 ARPPLLASSYVQG--AYGPVLFSPGVVPFSGWNPYSASVSPVLSPGAQPAVGATSLYGVT 262
+R +AS Q +Y ++ GVVP GWNPYS + V G +L
Sbjct: 177 SRASFIASPRWQDPSSYASLIMPQGVVPVQGWNPYSGQLGSVSPSGTGNDQNYRNLQQNE 236
Query: 263 QISSSMPALAGLYPSLPSSAGPSS---SGQMEQSFPERPGEPECQYFLKTGDCKFGSSCR 319
I S + P S+ P + E FPERPG+PECQ+++KTGDCKFG+ C+
Sbjct: 237 TIESGSQSQGSFSGYNPGSSVPLGGYYALPRENVFPERPGQPECQFYMKTGDCKFGTVCK 296
Query: 320 FHHPRDRVVPRTNCALSPLGLPLRPGAQPCTFYLQNGRCKFGATCKFDHPMGAMRYSPSA 379
FHHPRDR P +C LS +GLPLRPG C FY + G CKFG +CKFDHPM Y +A
Sbjct: 297 FHHPRDRQAPPPDCLLSSIGLPLRPGEPLCVFYTRYGICKFGPSCKFDHPMRVFTYDNTA 356
Query: 380 S---SLIETPVAPYPVGSLLSTLAPASSSS 406
S ++ET S+ T A++SS
Sbjct: 357 SETDEVVETSTGKSRRLSVSETRQAATTSS 386
>sp|Q5JLB5|C3H12_ORYSJ Zinc finger CCCH domain-containing protein 12 OS=Oryza sativa
subsp. japonica GN=Os01g0917400 PE=2 SV=2
Length = 439
Score = 318 bits (815), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 172/385 (44%), Positives = 219/385 (56%), Gaps = 23/385 (5%)
Query: 26 DQATGLEESMWQSDLKVNES------YPQRHGVPDCVFYMRTGVCGYGDRCRYNHPRNRA 79
D A E MWQ YP+R G PDC +Y+RTG+C +G CR+NHP++R
Sbjct: 51 DPAALYGEGMWQQMTMSGSGAMQPGPYPERSGEPDCTYYLRTGLCRFGMSCRFNHPQDRN 110
Query: 80 AVEAAVRATGDYPDRPGEPICQFYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPL 139
A+ R G+YP+R G+P CQ+YLKTGTCKFG +CKFHHP+ G V LN GYPL
Sbjct: 111 LAIASARMKGEYPERMGQPECQYYLKTGTCKFGPTCKFHHPREKAGIAGRVQLNTLGYPL 170
Query: 140 RPGEKECSYYLKTGQCKFGITCKFHHPQPAGTSLPASAPQFYPPVQSPTVPMAEQYGGAS 199
RP EKEC+YYLKTGQCK+G TCKFHHP+ + YP V S + Y G
Sbjct: 171 RPSEKECAYYLKTGQCKYGNTCKFHHPELFNAMASSRGSPIYPSVHS-SATAGPPYTGTM 229
Query: 200 TSLRVARPPLLASSYVQG--AYGPVLFSPGVVPFSGWNPYSASVSPVLSPGAQ-PAVGAT 256
S R + S Q Y P++ G+V WN Y+ + PV S ++ + GA
Sbjct: 230 ASWAFPRGSFIPSPRWQNPSNYAPMIVPQGLVQVPSWNSYTGQMMPVSSSESRLQSPGAQ 289
Query: 257 SLYGVTQISSSMPALAGLYPSLPSSA--GPSSSGQMEQSFPERPGEPECQYFLKTGDCKF 314
YG +Q + G+ SS+ P + Q E FPERP +PECQY++KTGDCKF
Sbjct: 290 QTYGTSQQVDASAGNQGMLSPYRSSSYPVPQYALQRENVFPERPDQPECQYYMKTGDCKF 349
Query: 315 GSSCRFHHPRDRVVPRTNCALSPLGLPLRPGAQPCTFYLQNGRCKFGATCKFDH-----P 369
G+ C+FHHPR R +P +C LSP+GLPLRPG + C FY + G CKFGA CKFDH P
Sbjct: 350 GAVCKFHHPRVRSMPTPDCVLSPVGLPLRPGEELCKFYSRYGICKFGANCKFDHPTMAPP 409
Query: 370 MGAMRYS------PSASSLIETPVA 388
MG Y P L+++P A
Sbjct: 410 MGVYAYGSASTNVPMVRRLLQSPSA 434
>sp|Q8L7N8|C3H57_ARATH Zinc finger CCCH domain-containing protein 57 OS=Arabidopsis
thaliana GN=ZFN3 PE=2 SV=2
Length = 375
Score = 297 bits (761), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 176/409 (43%), Positives = 227/409 (55%), Gaps = 72/409 (17%)
Query: 32 EESMWQSDLK------VNESYPQRHGVPDCVFYMRTGVCGYGDRCRYNHPRNRAAVEAAV 85
+ +MWQ +L V+ SYP+RHG PDC +Y+RTG+C +G CR+NHP +R V A
Sbjct: 19 QNAMWQMNLGSDDTMGVDGSYPERHGEPDCAYYIRTGLCRFGSTCRFNHPHDRKLVIATA 78
Query: 86 RATGDYPDRPGEPICQFYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGEKE 145
R G+YP+R G+P C+FYLKTGTCKFG +CKFHHP++ G V +N+ YPLRP E +
Sbjct: 79 RIKGEYPERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGIDGSVSVNVLSYPLRPNEDD 138
Query: 146 CSYYLKTGQCKFGITCKFHHPQPAGTSLPASAPQFYPPVQSPTVPMAEQ--YGGASTSLR 203
CSY+L+ GQCKFG TCKF+HPQ T+L S PV S + Q Y + TS
Sbjct: 139 CSYFLRIGQCKFGGTCKFNHPQTQSTNLMVSVRG--SPVYSALQSLTGQPSYSWSRTSF- 195
Query: 204 VARPPLLA--SSYVQGAYGPVLFSPGVVPFSGWNPYSASVSPVLSPGAQPAVGATSLYGV 261
VA PP L S + G+ G LFS G +S + P+
Sbjct: 196 VANPPRLQDPSGFASGSQGG-LFSSGF--------HSGNSVPL----------------- 229
Query: 262 TQISSSMPALAGLYPSLPSSAGPSSSGQMEQSFPERPGEPECQYFLKTGDCKFGSSCRFH 321
G Y +LP E FPERPG+PECQ+++KTGDCKFG+ C+FH
Sbjct: 230 -----------GFY-ALPR----------ENVFPERPGQPECQFYMKTGDCKFGTVCKFH 267
Query: 322 HPRDRVVPRTNCALSPLGLPLRPGAQPCTFYLQNGRCKFGATCKFDHPMGAMRY------ 375
HPRDR P +C LS +GLPLRPG C FY + G CKFG +CKFDHPM Y
Sbjct: 268 HPRDRQTPPPDCVLSSVGLPLRPGEPLCVFYSRYGICKFGPSCKFDHPMRVFTYNNNTAS 327
Query: 376 -SPSASSLIETPVAPYPVGSLLSTLAPASSSSDLRPELISGSKKDSLLS 423
SPS+S ET + L+S+ A +S PE S KD+++
Sbjct: 328 PSPSSSLHQETAITTELRNLLVSSSVEAKPTS--LPETTSA--KDTIVD 372
>sp|Q94AD9|C3H3_ARATH Zinc finger CCCH domain-containing protein 3 OS=Arabidopsis
thaliana GN=At1g04990 PE=2 SV=1
Length = 404
Score = 223 bits (569), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 149/418 (35%), Positives = 208/418 (49%), Gaps = 72/418 (17%)
Query: 40 LKVNES-------YPQRHGVPDCVFYMRTGVCGYGDRCRYNHPRNRAAVEAAVRATGDYP 92
+KVNE+ YP R G DC FY+RTG+CGYG CRYNHP + A + + P
Sbjct: 31 MKVNETGVEELNPYPDRPGERDCQFYLRTGLCGYGSSCRYNHPTHLPQDVAYYKE--ELP 88
Query: 93 DRPGEPICQFYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGEKECSYYLKT 152
+R G+P C+++LKTG CK+G +CK+HHPK G+ V N+ G P+R GEK C YYL+T
Sbjct: 89 ERIGQPDCEYFLKTGACKYGPTCKYHHPKDRNGAQP-VMFNVIGLPMRLGEKPCPYYLRT 147
Query: 153 GQCKFGITCKFHHPQPAGTSLPASAPQFYPPVQSPTVPMAEQYGGASTSLRVARPPLLAS 212
G C+FG+ CKFHHPQP A +P + LR A + S
Sbjct: 148 GTCRFGVACKFHHPQPDNGHSTAYGMSSFP----------------AADLRYASGLTMMS 191
Query: 213 SY-------VQGAYGPVLFSP--GVVPFSGWNPYSASVSPVLSPGAQPAVGATSLYGVTQ 263
+Y V +Y P+L SP G +P GW PY A+ + S+Y V
Sbjct: 192 TYGTLPRPQVPQSYVPILVSPSQGFLPPQGWAPYMAA--------------SNSMYNV-- 235
Query: 264 ISSSMPALAGLYPSLPSSAGPSSSGQMEQSFPERPGEPECQYFLKTGDCKFGSSCRFHHP 323
+ P +G SSA + + + + E +PEC++F+ TG CK+G C++ HP
Sbjct: 236 --KNQPYYSG------SSASMAMAVALNRGLSESSDQPECRFFMNTGTCKYGDDCKYSHP 287
Query: 324 RDRVVPRTNCALSPLGLPLRPGAQPCTFYLQNGRCKFGATCKFDHPMGAMRYSPSASSLI 383
R+ ++P LP RPG C + G CKFG CKFDHPM A+SL
Sbjct: 288 GVRISQPPPSLINPFVLPARPGQPACGNFRSYGFCKFGPNCKFDHPMLPYPGLTMATSL- 346
Query: 384 ETPVAPYPVGSLLST---LAPASSSSDLRPELISGS---KKDSLLSRIPSSGNTSSSS 435
P P S ++T ++P + SD + L +G KK+S + P +G S
Sbjct: 347 -----PTPFASPVTTHQRISPTPNRSDSK-SLSNGKPDVKKESSETEKPDNGEVQDLS 398
>sp|Q9STM4|C3H43_ARATH Zinc finger CCCH domain-containing protein 43 OS=Arabidopsis
thaliana GN=At3g48440 PE=1 SV=1
Length = 448
Score = 211 bits (537), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 135/363 (37%), Positives = 184/363 (50%), Gaps = 37/363 (10%)
Query: 36 WQSDLKVNESYPQRHGVPDCVFYMRTGVCGYGDRCRYNHPRNRA---AVEAAVRATGDYP 92
W + N YP R G DC FYMRTG C +G C++NHP R A + VR D
Sbjct: 98 WSENESEN-VYPVRPGAEDCSFYMRTGSCKFGSSCKFNHPLARKFQIARDNKVREKEDDG 156
Query: 93 DRPGEPICQFYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGEKECSYYLKT 152
+ G C++Y +TG CK+G +C+F+H G S LN G PLRPGE EC YY++
Sbjct: 157 GKLGLIDCKYYFRTGGCKYGETCRFNHTIPKSGLASAPELNFLGLPLRPGEVECPYYMRN 216
Query: 153 GQCKFGITCKFHHPQPAGTSLPASAPQF--YPPVQSPTVPMAEQYGGASTSLRVARPPLL 210
G CK+G CKF+HP P T +P F V T + +STS R
Sbjct: 217 GSCKYGAECKFNHPDPT-TIGGTDSPSFRGNNGVSIGTFSPKATFQASSTSWSSPRHVNG 275
Query: 211 ASSYVQGAYGPVLFSP--GVVPFS-GWNPYSASVSP----VLSPGAQPAVGATSLYGVTQ 263
S ++ PV+ S GV + WN Y ASV V SP T L +
Sbjct: 276 TSPFI-----PVMLSQTHGVTSQNPEWNGYQASVYSSERGVFSPST------TYLMNNSS 324
Query: 264 ISSSMPALAGLYPSLPSSAGPSSSGQMEQSFPERPGEPECQYFLKTGDCKFGSSCRFHHP 323
+SM L+ +P+ + FPERP +PEC Y++KTGDCKF +C++HHP
Sbjct: 325 AETSM-LLSQYRHQMPA-----------EEFPERPDQPECSYYMKTGDCKFKFNCKYHHP 372
Query: 324 RDRVVPRTNCALSPLGLPLRPGAQPCTFYLQNGRCKFGATCKFDHPMGAMRYSPSASSLI 383
++R+ AL+ GLPLRP CT+Y + G CKFG C+FDH + + S+ +++
Sbjct: 373 KNRLPKLPPYALNDKGLPLRPDQNICTYYSRYGICKFGPACRFDHSVQPPYSTESSQAIV 432
Query: 384 ETP 386
E P
Sbjct: 433 EPP 435
>sp|Q941Q3|C3H37_ARATH Zinc finger CCCH domain-containing protein 37 OS=Arabidopsis
thaliana GN=HUA1 PE=1 SV=1
Length = 524
Score = 210 bits (535), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 142/401 (35%), Positives = 197/401 (49%), Gaps = 72/401 (17%)
Query: 3 LYGRNNTSRNGSQSGHQPQWSPTDQATGLEESMWQSDLKVNESYPQRHGVPDCVFYMRTG 62
L G +NT G W TD T + S L + YPQR G DC YM+T
Sbjct: 137 LLGAHNTI------GQTEAWYTTDYFTKRPKLESTSHLPI---YPQRAGEKDCTHYMQTR 187
Query: 63 VCGYGDRCRYNHPRNRAA------VEAAVRATGDYPDRPGEPICQFYLKTGTCKFGASCK 116
C +G+ CR++HP EA V +YP+RPGEP C +Y+KT CK+G+ CK
Sbjct: 188 TCKFGESCRFDHPIWVPEGGIPDWKEAPVVPNEEYPERPGEPDCPYYIKTQRCKYGSKCK 247
Query: 117 FHHPKHSGGSMSHVPLNIYGYPLRPGEKECSYYLKTGQCKFGITCKFHHPQPAGTSLPAS 176
F+HP+ ++ P RP E C++Y+KTG+CKFG++CKFHHP+ LP+S
Sbjct: 248 FNHPREEAAVSVETQDSL---PERPSEPMCTFYMKTGKCKFGLSCKFHHPK--DIQLPSS 302
Query: 177 APQFYPPVQSPTVPMAEQYGGASTSLRVARPPLLASSYVQGAYGPVLF--SPGVVPFSGW 234
+ Q G+S L + P + +V + P L+ S G+ SG
Sbjct: 303 S----------------QDIGSSVGL-TSEPDATNNPHV--TFTPALYHNSKGLPVRSG- 342
Query: 235 NPYSASVSPVLSPGAQPAVGATSLYGVTQISSSMPALAGLYPSLPSS---------AGPS 285
P GAT Y + ++ +P AG+ SL SS P+
Sbjct: 343 ----EVDCPFYLKTGSCKYGATCRYNHPERTAFIPQAAGVNYSLVSSNTANLNLGLVTPA 398
Query: 286 SS----------GQMEQSFPERPGEPECQYFLKTGDCKFGSSCRFHHPRDRVVPRT---- 331
+S G + ++P+RPG+ EC Y++KTG+CKFG C+FHHP DR+ T
Sbjct: 399 TSFYQTLTQPTLGVISATYPQRPGQSECDYYMKTGECKFGERCKFHHPADRLSAMTKQAP 458
Query: 332 ---NCALSPLGLPLRPGAQPCTFYLQNGRCKFGATCKFDHP 369
N LS G P R GA C +Y++ G CK+GATCKFDHP
Sbjct: 459 QQPNVKLSLAGYPRREGALNCPYYMKTGTCKYGATCKFDHP 499
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 78/164 (47%), Gaps = 42/164 (25%)
Query: 47 PQRHGVPDCVFYMRTGVCGYGDRCRYNHPRNRAAVEAAVRA------------------- 87
P R G DC FY++TG C YG CRYNHP A + A
Sbjct: 338 PVRSGEVDCPFYLKTGSCKYGATCRYNHPERTAFIPQAAGVNYSLVSSNTANLNLGLVTP 397
Query: 88 ----------------TGDYPDRPGEPICQFYLKTGTCKFGASCKFHHPKHSGGSMS--- 128
+ YP RPG+ C +Y+KTG CKFG CKFHHP +M+
Sbjct: 398 ATSFYQTLTQPTLGVISATYPQRPGQSECDYYMKTGECKFGERCKFHHPADRLSAMTKQA 457
Query: 129 ----HVPLNIYGYPLRPGEKECSYYLKTGQCKFGITCKFHHPQP 168
+V L++ GYP R G C YY+KTG CK+G TCKF HP P
Sbjct: 458 PQQPNVKLSLAGYPRREGALNCPYYMKTGTCKYGATCKFDHPPP 501
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 21/30 (70%)
Query: 341 PLRPGAQPCTFYLQNGRCKFGATCKFDHPM 370
P R G + CT Y+Q CKFG +C+FDHP+
Sbjct: 172 PQRAGEKDCTHYMQTRTCKFGESCRFDHPI 201
>sp|Q5RJC5|C3H67_ARATH Zinc finger CCCH domain-containing protein 67 OS=Arabidopsis
thaliana GN=At5g63260 PE=2 SV=2
Length = 435
Score = 204 bits (520), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 131/369 (35%), Positives = 184/369 (49%), Gaps = 48/369 (13%)
Query: 32 EESMWQSDLKVNESYPQRHGVPDCVFYMRTGVCGYGDRCRYNHPRNRAAV--EAAVRATG 89
+E S+ ++ YP R DC FYMRTG C YG C++NHP R VR
Sbjct: 84 KEEEEGSEKRMMMVYPVRPDSEDCSFYMRTGSCKYGSSCKFNHPVRRKLQIGRERVRERD 143
Query: 90 DYPDRPGEPICQFYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGEKECSYY 149
+ + P C++Y +TG CK+G SC+F H K S LN G P+RPGEKEC +Y
Sbjct: 144 EDVENPKLMECKYYFRTGGCKYGESCRFSHMKEHNSPASVPELNFLGLPIRPGEKECPFY 203
Query: 150 LKTGQCKFGITCKFHHPQPAGTSLPASAPQFYPPVQSPTVPMAEQYGGASTSLRV----A 205
++ G CKFG CKF+HP P + P+ G S S + +
Sbjct: 204 MRNGSCKFGSDCKFNHPDPTA-------------IGGVDSPLYRGNNGGSFSPKAPSQAS 250
Query: 206 RPPLLASSYVQGA----YGPVLF--SPGVVP-FSGWNPYSASVS--PVLSPGAQPAVGAT 256
++ ++ G + P +F S GV P S WN Y AS + P SP A +
Sbjct: 251 STSWSSTRHMNGTGTAPFIPSMFPHSRGVTPQASDWNGYQASSAYPPERSPLAPSSY--- 307
Query: 257 SLYGVTQISSSMPALAGLYPSLPSSAGPSSSGQME-QSFPERPGEPECQYFLKTGDCKFG 315
Q+++S+ +S+ QM + FPERP +PEC Y+LKTGDCKF
Sbjct: 308 ------QVNNSLAE---------TSSFSQYQHQMSVEEFPERPDQPECTYYLKTGDCKFK 352
Query: 316 SSCRFHHPRDRVVPRTNCALSPLGLPLRPGAQPCTFYLQNGRCKFGATCKFDHPMGAMRY 375
C++HHP++R+ + + + GLPLRP CT Y + G CKFG C+FDH + +
Sbjct: 353 YKCKYHHPKNRLPKQAAFSFNDKGLPLRPDQSMCTHYSRYGICKFGPACRFDHSIPPT-F 411
Query: 376 SPSASSLIE 384
SPS+S +E
Sbjct: 412 SPSSSQTVE 420
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 64/106 (60%), Gaps = 6/106 (5%)
Query: 296 ERPGEPECQYFLKTGDCKFGSSCRFHHPRDRVVPRTNCALSPLGLPLRPGAQPCTFYLQN 355
E P EC+Y+ +TG CK+G SCRF H ++ P + L+ LGLP+RPG + C FY++N
Sbjct: 147 ENPKLMECKYYFRTGGCKYGESCRFSHMKEHNSPASVPELNFLGLPIRPGEKECPFYMRN 206
Query: 356 GRCKFGATCKFDHPMGAMRYSPSASSLIETPVAPYPVGSLLSTLAP 401
G CKFG+ CKF+HP P+A +++P+ G S AP
Sbjct: 207 GSCKFGSDCKFNHP------DPTAIGGVDSPLYRGNNGGSFSPKAP 246
>sp|O48772|C3H26_ARATH Zinc finger CCCH domain-containing protein 26 OS=Arabidopsis
thaliana GN=ZFN2 PE=2 SV=1
Length = 453
Score = 203 bits (516), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 133/374 (35%), Positives = 187/374 (50%), Gaps = 55/374 (14%)
Query: 40 LKVNES-------YPQRHGVPDCVFYMRTGVCGYGDRCRYNHPRNRAAVEAAVRATGDYP 92
+KVNE YP R G DC F++RTG CGYG+ CRYNHP + + P
Sbjct: 28 MKVNEDNMEQSSPYPDRPGERDCQFFLRTGQCGYGNSCRYNHPLTNLP-QGIIYYRDQLP 86
Query: 93 DRPGEPICQFYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGEKECSYYLKT 152
+R G+P C+ TG CK+G +CK+HHPK G+ V N+ G P+R GEK C YY++T
Sbjct: 87 ERVGQPDCE----TGACKYGPTCKYHHPKDRNGA-GPVLFNVLGLPMRQGEKPCPYYMQT 141
Query: 153 GQCKFGITCKFHHPQPAGTSLPASAPQFYPPVQSPTVPMAEQYGGASTSL------RVAR 206
G C+FG+ CKFHHP P S P++ Y P+V G SL + R
Sbjct: 142 GLCRFGVACKFHHPHPH--SQPSNGHSAYAMSSFPSVGFPYASGMTMVSLPPATYGAIPR 199
Query: 207 PPLLASSYVQGAYGPVLFSP--GVVPFSGWNPYSASVSPVLSPGAQPAVGATSLYGVTQI 264
P + S AY P + +P G++P GW Y + +P+ + TQ+
Sbjct: 200 PQVPQSQ----AYMPYMVAPSQGLLPPQGWATYMTASNPIYN-------------MKTQL 242
Query: 265 SSSMPALAGLYPSLPSSAGPSSSGQMEQSFPERPGEPECQYFLKTGDCKFGSSCRFHHPR 324
SS S++ + SF ER EC++F+ TG CK+G C++ HP+
Sbjct: 243 DSSS-----------SASVAVTVTSHHHSFSERA---ECRFFMNTGTCKYGDDCKYSHPK 288
Query: 325 DRVVPRTNCALSPLGLPLRPGAQPCTFYLQNGRCKFGATCKFDHPMGAMRYSPSASSLIE 384
+R++ L+P+ LP RPG C + G CKFGA CKFDH M Y+ + ++
Sbjct: 289 ERLLQSPPTLLNPIVLPARPGQPACGNFKAYGFCKFGANCKFDHSMLLNPYNNTGLAMSS 348
Query: 385 TPVAPYPVGSLLST 398
P PYP +ST
Sbjct: 349 LPT-PYPYAPPVST 361
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 83/172 (48%), Gaps = 45/172 (26%)
Query: 286 SSGQMEQS--FPERPGEPECQYFLKTGDCKFGSSCRFHHP-----------RDRVVPRTN 332
+ MEQS +P+RPGE +CQ+FL+TG C +G+SCR++HP RD++ R
Sbjct: 31 NEDNMEQSSPYPDRPGERDCQFFLRTGQCGYGNSCRYNHPLTNLPQGIIYYRDQLPERVG 90
Query: 333 --------CALSP--------------------LGLPLRPGAQPCTFYLQNGRCKFGATC 364
C P LGLP+R G +PC +Y+Q G C+FG C
Sbjct: 91 QPDCETGACKYGPTCKYHHPKDRNGAGPVLFNVLGLPMRQGEKPCPYYMQTGLCRFGVAC 150
Query: 365 KFDHPMGAMR----YSPSASSLIETPVAPYPVGSLLSTLAPASSSSDLRPEL 412
KF HP + +S A S + PY G + +L PA+ + RP++
Sbjct: 151 KFHHPHPHSQPSNGHSAYAMSSFPSVGFPYASGMTMVSLPPATYGAIPRPQV 202
>sp|Q5ZDJ6|C3H8_ORYSJ Zinc finger CCCH domain-containing protein 8 OS=Oryza sativa subsp.
japonica GN=Os01g0616400 PE=2 SV=2
Length = 462
Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 117/359 (32%), Positives = 167/359 (46%), Gaps = 47/359 (13%)
Query: 46 YPQRHGVPDCVFYMRTGVCGYGDRCRYNHPRNRAA------VEAAVRATGDYPDRPGEPI 99
YPQR G DC FYM T C +G C+++HP+ E A YP++ GEP
Sbjct: 102 YPQRPGEKDCAFYMMTRTCKFGGSCKFDHPQWVPEGGIPNWKEQAANVEESYPEQEGEPD 161
Query: 100 CQFYLKTGTCKFGASCKFHHPKHSGGSMS-------HVPLNIYGYPLRPGEKECSYYLKT 152
C F++KTG CKFG+ CKF+HPK +++ H+ + P+RP E CS+Y KT
Sbjct: 162 CPFFMKTGKCKFGSKCKFNHPKEKVNALASGNTNDKHLIADSSILPVRPSEPLCSFYAKT 221
Query: 153 GQCKFGITCKFHHPQPAGTSLPASAPQFYPPVQSPTVPMAEQYGGASTSLRVARPPLLAS 212
G+CKF CKF+HP+ +P+S + P + TV G A+ S+ +A+
Sbjct: 222 GKCKFRAMCKFNHPK--DIEIPSSQNE---PESAVTVEGETDIGSAADSVSAKMQTPVAA 276
Query: 213 SYVQGAYG----------PVLFSPGVVPFSGWNPYSASVSPVLS---PGAQPAVGATSLY 259
+ + G P G F ++ VL+ P Q +
Sbjct: 277 AQEFNSKGLPMRPGEVDCPFYMKMGSCKFGSTCRFNHPDRLVLNFPLPLGQTILPTPESM 336
Query: 260 GVTQISSSMPALAGLYPSLPSSAGPSSSGQMEQSFPERPGEPECQYFLKTGDCKFGSSCR 319
+ ++ M +P GP ++P+RPG C +++KTG CKF C+
Sbjct: 337 LLNSSANFMQGFDFHAAHMPVGPGPV-------TYPQRPGATVCDFYMKTGFCKFADRCK 389
Query: 320 FHHPRDRVVP---------RTNCALSPLGLPLRPGAQPCTFYLQNGRCKFGATCKFDHP 369
FHHP DR P + L+ GLP R A C FY++ G CKFG CKFDHP
Sbjct: 390 FHHPIDRSAPDPSANWEPAEESVQLTLAGLPRREDAVVCAFYMKTGVCKFGMQCKFDHP 448
Score = 142 bits (358), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 106/360 (29%), Positives = 148/360 (41%), Gaps = 84/360 (23%)
Query: 13 GSQSGHQPQWSPTDQATGLEESMWQSDLKVNESYPQRHGVPDCVFYMRTGVCGYGDRCRY 72
GS PQW P +E V ESYP++ G PDC F+M+TG C +G +C++
Sbjct: 124 GSCKFDHPQWVPEGGIPNWKEQA----ANVEESYPEQEGEPDCPFFMKTGKCKFGSKCKF 179
Query: 73 NHPRNRAAVEAA--------VRATGDYPDRPGEPICQFYLKTGTCKFGASCKFHHPK--- 121
NHP+ + A+ + + P RP EP+C FY KTG CKF A CKF+HPK
Sbjct: 180 NHPKEKVNALASGNTNDKHLIADSSILPVRPSEPLCSFYAKTGKCKFRAMCKFNHPKDIE 239
Query: 122 ------------------------HSGGSMSHVPL------NIYGYPLRPGEKECSYYLK 151
S + P+ N G P+RPGE +C +Y+K
Sbjct: 240 IPSSQNEPESAVTVEGETDIGSAADSVSAKMQTPVAAAQEFNSKGLPMRPGEVDCPFYMK 299
Query: 152 TGQCKFGITCKFHHPQPAGTSLPASAPQFYPPVQSPTVPMAEQYGGASTSLRVARPPLLA 211
G CKFG TC+F+HP + P P+ +P E + L + +
Sbjct: 300 MGSCKFGSTCRFNHPDRLVLNFPL-------PLGQTILPTPE------SMLLNSSANFMQ 346
Query: 212 SSYVQGAYGPVLFSPGVVPFSGWNPYSASVSPVLSPGAQPAVGATSLYGVTQISSSMPAL 271
A+ PV PG PV P +P Y T
Sbjct: 347 GFDFHAAHMPV--GPG---------------PVTYP-QRPGATVCDFYMKTGFCKFADRC 388
Query: 272 AGLYPSLPSSAGPSSSGQ-MEQS-------FPERPGEPECQYFLKTGDCKFGSSCRFHHP 323
+P S+ PS++ + E+S P R C +++KTG CKFG C+F HP
Sbjct: 389 KFHHPIDRSAPDPSANWEPAEESVQLTLAGLPRREDAVVCAFYMKTGVCKFGMQCKFDHP 448
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/330 (30%), Positives = 148/330 (44%), Gaps = 67/330 (20%)
Query: 91 YPDRPGEPICQFYLKTGTCKFGASCKFHHPKH--SGG--SMSHVPLNIY-GYPLRPGEKE 145
YP RPGE C FY+ T TCKFG SCKF HP+ GG + N+ YP + GE +
Sbjct: 102 YPQRPGEKDCAFYMMTRTCKFGGSCKFDHPQWVPEGGIPNWKEQAANVEESYPEQEGEPD 161
Query: 146 CSYYLKTGQCKFGITCKFHHPQPAGTSLPASAPQFYPPVQSPTVPMAEQYGGASTSLRVA 205
C +++KTG+CKFG CKF+HP+ +L + +++ A +S+
Sbjct: 162 CPFFMKTGKCKFGSKCKFNHPKEKVNALASGNTN-------------DKHLIADSSILPV 208
Query: 206 RPPL-LASSYVQGAYGPVLFSPGVVPFSGWNPYSASVSPVLSPGAQPAVGATSLYGVTQI 264
RP L S Y + G F ++ + A ++ G T I
Sbjct: 209 RPSEPLCSFYAKT---------GKCKFRAMCKFNHPKDIEIPSSQNEPESAVTVEGETDI 259
Query: 265 SSSMPALAGLYPSLPSSAGPSSSGQMEQSFPERPGEPECQYFLKTGDCKFGSSCRFHHPR 324
S+ +++ + ++A +S + P RPGE +C +++K G CKFGS+CRF+HP
Sbjct: 260 GSAADSVSAKMQTPVAAAQEFNS----KGLPMRPGEVDCPFYMKMGSCKFGSTCRFNHP- 314
Query: 325 DRVV------------PRTNCAL----------------------SPLGLPLRPGAQPCT 350
DR+V P L P+ P RPGA C
Sbjct: 315 DRLVLNFPLPLGQTILPTPESMLLNSSANFMQGFDFHAAHMPVGPGPVTYPQRPGATVCD 374
Query: 351 FYLQNGRCKFGATCKFDHPMGAMRYSPSAS 380
FY++ G CKF CKF HP+ PSA+
Sbjct: 375 FYMKTGFCKFADRCKFHHPIDRSAPDPSAN 404
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 73/165 (44%), Gaps = 43/165 (26%)
Query: 47 PQRHGVPDCVFYMRTGVCGYGDRCRYNHPR-----------------------NRAA--- 80
P R G DC FYM+ G C +G CR+NHP N +A
Sbjct: 286 PMRPGEVDCPFYMKMGSCKFGSTCRFNHPDRLVLNFPLPLGQTILPTPESMLLNSSANFM 345
Query: 81 ----VEAAVRATG----DYPDRPGEPICQFYLKTGTCKFGASCKFHHPKHSGG------- 125
AA G YP RPG +C FY+KTG CKF CKFHHP
Sbjct: 346 QGFDFHAAHMPVGPGPVTYPQRPGATVCDFYMKTGFCKFADRCKFHHPIDRSAPDPSANW 405
Query: 126 --SMSHVPLNIYGYPLRPGEKECSYYLKTGQCKFGITCKFHHPQP 168
+ V L + G P R C++Y+KTG CKFG+ CKF HP P
Sbjct: 406 EPAEESVQLTLAGLPRREDAVVCAFYMKTGVCKFGMQCKFDHPPP 450
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 94/204 (46%), Gaps = 20/204 (9%)
Query: 248 GAQPAVGATSLYGVTQISSSMPALAGLYPSLPSSAGPSSSGQMEQS---FPERPGEPECQ 304
GA+ ++G + S++ + LY S + P ++E S +P+RPGE +C
Sbjct: 57 GARRSMGVLYHQPIMGSHSTVEQIEALYSSNTMTKRP----RLESSLPIYPQRPGEKDCA 112
Query: 305 YFLKTGDCKFGSSCRFHHPR---DRVVP--RTNCALSPLGLPLRPGAQPCTFYLQNGRCK 359
+++ T CKFG SC+F HP+ + +P + A P + G C F+++ G+CK
Sbjct: 113 FYMMTRTCKFGGSCKFDHPQWVPEGGIPNWKEQAANVEESYPEQEGEPDCPFFMKTGKCK 172
Query: 360 FGATCKFDHPMGAMRYSPSASS-----LIETPVAPYPVGSLLSTLAPASSSSDLRPELIS 414
FG+ CKF+HP + S ++ + ++ + P L + + R
Sbjct: 173 FGSKCKFNHPKEKVNALASGNTNDKHLIADSSILPVRPSEPLCSFYAKTGKCKFRAMCKF 232
Query: 415 GSKKDSLLSRIPSSGNTSSSSVGL 438
KD IPSS N S+V +
Sbjct: 233 NHPKD---IEIPSSQNEPESAVTV 253
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 11/69 (15%)
Query: 21 QWSPTDQATGLEESMWQSDLKVNESYPQRHGVPDCVFYMRTGVCGYGDRCRYNHPRNRAA 80
W P +++ L + P+R C FYM+TGVC +G +C+++HP + A
Sbjct: 404 NWEPAEESVQLTLA----------GLPRREDAVVCAFYMKTGVCKFGMQCKFDHPPPQEA 453
Query: 81 VEAAVRATG 89
+ A V +G
Sbjct: 454 I-AKVSNSG 461
>sp|Q2QTY2|C3H65_ORYSJ Zinc finger CCCH domain-containing protein 65 OS=Oryza sativa
subsp. japonica GN=Os12g0278800 PE=2 SV=1
Length = 529
Score = 158 bits (400), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 102/286 (35%), Positives = 138/286 (48%), Gaps = 39/286 (13%)
Query: 100 CQFYLKTGTCKFGASCKFHHP--KHSGGSMSHVPLNIYGYPLRPGEKECSYYLKTGQCKF 157
C++Y G CKFG +CK+ H K V LN G PLRPGEKEC YY++TG CK+
Sbjct: 243 CKYYSTPGGCKFGKACKYLHRDGKEGKTDAEKVDLNFLGLPLRPGEKECPYYMRTGSCKY 302
Query: 158 GITCKFHHPQPAGTSLPASAPQFYPPVQSPTVPMAEQYGGAST----------SLRVARP 207
CKFHHP P+ + + PQ ++ P + G +S ++
Sbjct: 303 ATNCKFHHPDPSNVA--SKDPQLE--HENGDAPQQDVQGSSSQPNASIWPDQRTVNEHHV 358
Query: 208 PLLA--SSYVQGAYGPVLFSPGVVPFSGWNPY-SASVSPVLSPGAQPAVGATSLYGVTQI 264
P +A SY G P G+ P WN Y ++P PG
Sbjct: 359 PFIAPSPSYSAGMLPPQ----GMYPPPEWNGYHQVPLNPYYPPGVP-------------- 400
Query: 265 SSSMPALAGLYPSLPSSAGPSSSGQMEQSFPERPGEPECQYFLKTGDCKFGSSCRFHHPR 324
PA +P + P + +PERPG+PECQ+F+K+G CKF C++HHPR
Sbjct: 401 FQHFPAAPINHPMYKAPEIPGHQQVPSEEYPERPGQPECQHFVKSGFCKFRMKCKYHHPR 460
Query: 325 DRVVPRTNCALSPLGLPLRPGAQPCTFYLQNGRCKFGATCKFDHPM 370
V P ALSPLGLP++P CT+Y + G CKFG C ++HP
Sbjct: 461 SPVPPAG--ALSPLGLPIKPDQPVCTYYGRYGVCKFGPACAYNHPF 504
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 62/103 (60%), Gaps = 12/103 (11%)
Query: 90 DYPDRPGEPICQFYLKTGTCKFGASCKFHHPKHSGGSMSHVP----LNIYGYPLRPGEKE 145
+YP+RPG+P CQ ++K+G CKF CK+HHP+ S VP L+ G P++P +
Sbjct: 429 EYPERPGQPECQHFVKSGFCKFRMKCKYHHPR------SPVPPAGALSPLGLPIKPDQPV 482
Query: 146 CSYYLKTGQCKFGITCKFHHPQPAGTSLPASAPQFYPPVQSPT 188
C+YY + G CKFG C ++HP + +PA+ P P Q PT
Sbjct: 483 CTYYGRYGVCKFGPACAYNHPF-NFSPVPAAGPPLL-PAQYPT 523
Score = 72.0 bits (175), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 58/101 (57%), Gaps = 7/101 (6%)
Query: 43 NESYPQRHGVPDCVFYMRTGVCGYGDRCRYNHPRNRAAVEAAVRATGDYPDRPGEPICQF 102
+E YP+R G P+C ++++G C + +C+Y+HPR+ A+ G P +P +P+C +
Sbjct: 427 SEEYPERPGQPECQHFVKSGFCKFRMKCKYHHPRSPVPPAGALSPLG-LPIKPDQPVCTY 485
Query: 103 YLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGE 143
Y + G CKFG +C ++HP + P+ G PL P +
Sbjct: 486 YGRYGVCKFGPACAYNHP------FNFSPVPAAGPPLLPAQ 520
Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 302 ECQYFLKTGDCKFGSSCRFHHPRDRVVPRTNCA---LSPLGLPLRPGAQPCTFYLQNGRC 358
EC+Y+ G CKFG +C++ H RD +T+ L+ LGLPLRPG + C +Y++ G C
Sbjct: 242 ECKYYSTPGGCKFGKACKYLH-RDGKEGKTDAEKVDLNFLGLPLRPGEKECPYYMRTGSC 300
Query: 359 KFGATCKFDHP 369
K+ CKF HP
Sbjct: 301 KYATNCKFHHP 311
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 54 DCVFYMRTGVCGYGDRCRYNHPRNRAAVEAAVRATGDY---PDRPGEPICQFYLKTGTCK 110
+C +Y G C +G C+Y H + A + ++ P RPGE C +Y++TG+CK
Sbjct: 242 ECKYYSTPGGCKFGKACKYLHRDGKEGKTDAEKVDLNFLGLPLRPGEKECPYYMRTGSCK 301
Query: 111 FGASCKFHHPKHS 123
+ +CKFHHP S
Sbjct: 302 YATNCKFHHPDPS 314
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 294 FPERPGEPECQYFLKTGDCKFGSSCRFHHPRDRVVPRTN 332
FP RPGEP+C Y++K G C+FG C+F+HP + R
Sbjct: 105 FPRRPGEPDCTYYVKFGSCRFGMKCKFNHPARKKKSRVK 143
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 25/30 (83%)
Query: 137 YPLRPGEKECSYYLKTGQCKFGITCKFHHP 166
+P RPGE +C+YY+K G C+FG+ CKF+HP
Sbjct: 105 FPRRPGEPDCTYYVKFGSCRFGMKCKFNHP 134
Score = 49.3 bits (116), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 91 YPDRPGEPICQFYLKTGTCKFGASCKFHHP 120
+P RPGEP C +Y+K G+C+FG CKF+HP
Sbjct: 105 FPRRPGEPDCTYYVKFGSCRFGMKCKFNHP 134
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 73/199 (36%), Gaps = 73/199 (36%)
Query: 47 PQRHGVPDCVFYMRTGVCGYGDRCRYNHPR--NRAAVEAAVR-ATGDYPDRP-----GEP 98
P R G +C +YMRTG C Y C+++HP N A+ + + GD P + +P
Sbjct: 283 PLRPGEKECPYYMRTGSCKYATNCKFHHPDPSNVASKDPQLEHENGDAPQQDVQGSSSQP 342
Query: 99 ICQFYLKTGTCKFGASCKFHH-------PKHSGGSM--------------SHVPLN---- 133
+ T HH P +S G + VPLN
Sbjct: 343 NASIWPDQRT------VNEHHVPFIAPSPSYSAGMLPPQGMYPPPEWNGYHQVPLNPYYP 396
Query: 134 ----------------IYGYPLRPGEK--------------ECSYYLKTGQCKFGITCKF 163
+Y P PG + EC +++K+G CKF + CK+
Sbjct: 397 PGVPFQHFPAAPINHPMYKAPEIPGHQQVPSEEYPERPGQPECQHFVKSGFCKFRMKCKY 456
Query: 164 HHPQ----PAGTSLPASAP 178
HHP+ PAG P P
Sbjct: 457 HHPRSPVPPAGALSPLGLP 475
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 24/33 (72%)
Query: 46 YPQRHGVPDCVFYMRTGVCGYGDRCRYNHPRNR 78
+P+R G PDC +Y++ G C +G +C++NHP +
Sbjct: 105 FPRRPGEPDCTYYVKFGSCRFGMKCKFNHPARK 137
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 21/30 (70%)
Query: 340 LPLRPGAQPCTFYLQNGRCKFGATCKFDHP 369
P RPG CT+Y++ G C+FG CKF+HP
Sbjct: 105 FPRRPGEPDCTYYVKFGSCRFGMKCKFNHP 134
Score = 32.7 bits (73), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 15/23 (65%)
Query: 143 EKECSYYLKTGQCKFGITCKFHH 165
++EC YY G CKFG CK+ H
Sbjct: 240 QEECKYYSTPGGCKFGKACKYLH 262
>sp|Q5Z5Q3|C3H43_ORYSJ Zinc finger CCCH domain-containing protein 43 OS=Oryza sativa
subsp. japonica GN=Os06g0520600 PE=2 SV=1
Length = 711
Score = 125 bits (315), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 64/150 (42%), Positives = 84/150 (56%), Gaps = 22/150 (14%)
Query: 41 KVNESYPQRHGVPDCVFYMRTGVCGYGDRCRYNHPRNRAAVEAAVRATGD-YPDRPGEPI 99
KV E +P+R G PDC +Y++ G C +G C YNHP R A + + +P RPGEP
Sbjct: 36 KVEEQHPRRPGEPDCSYYVKFGSCKFGISCVYNHPDPRPQHGADDKKPAEQFPRRPGEPD 95
Query: 100 CQFYLKTGTCKFGASCKFHHP---------KHSGGSMSH------------VPLNIYGYP 138
C +Y+K G+CKFG +C+F+HP ++ G+ H V LN+ G P
Sbjct: 96 CSYYVKFGSCKFGMNCRFNHPPRMPVPPQQEYFSGNACHCHHIEGKSKVEQVKLNVLGLP 155
Query: 139 LRPGEKECSYYLKTGQCKFGITCKFHHPQP 168
LRPG CSYY+ G CKFG CKF HP P
Sbjct: 156 LRPGTGLCSYYMNRGICKFGTNCKFDHPDP 185
Score = 92.0 bits (227), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 54/99 (54%), Gaps = 21/99 (21%)
Query: 292 QSFPERPGEPECQYFLKTGDCKFGSSCRFHHPRDRVVP---------------------R 330
+ FP RPGEP+C Y++K G CKFG +CRF+HP VP
Sbjct: 85 EQFPRRPGEPDCSYYVKFGSCKFGMNCRFNHPPRMPVPPQQEYFSGNACHCHHIEGKSKV 144
Query: 331 TNCALSPLGLPLRPGAQPCTFYLQNGRCKFGATCKFDHP 369
L+ LGLPLRPG C++Y+ G CKFG CKFDHP
Sbjct: 145 EQVKLNVLGLPLRPGTGLCSYYMNRGICKFGTNCKFDHP 183
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 51/84 (60%)
Query: 286 SSGQMEQSFPERPGEPECQYFLKTGDCKFGSSCRFHHPRDRVVPRTNCALSPLGLPLRPG 345
+ ++E+ P RPGEP+C Y++K G CKFG SC ++HP R + P RPG
Sbjct: 33 KTKKVEEQHPRRPGEPDCSYYVKFGSCKFGISCVYNHPDPRPQHGADDKKPAEQFPRRPG 92
Query: 346 AQPCTFYLQNGRCKFGATCKFDHP 369
C++Y++ G CKFG C+F+HP
Sbjct: 93 EPDCSYYVKFGSCKFGMNCRFNHP 116
Score = 73.2 bits (178), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 49/105 (46%), Gaps = 22/105 (20%)
Query: 38 SDLKVNESYPQRHGVPDCVFYMRTGVCGYGDRCRYNHP---------------------- 75
D K E +P+R G PDC +Y++ G C +G CR+NHP
Sbjct: 79 DDKKPAEQFPRRPGEPDCSYYVKFGSCKFGMNCRFNHPPRMPVPPQQEYFSGNACHCHHI 138
Query: 76 RNRAAVEAAVRATGDYPDRPGEPICQFYLKTGTCKFGASCKFHHP 120
++ VE P RPG +C +Y+ G CKFG +CKF HP
Sbjct: 139 EGKSKVEQVKLNVLGLPLRPGTGLCSYYMNRGICKFGTNCKFDHP 183
>sp|Q0DBW8|C3H42_ORYSJ Zinc finger CCCH domain-containing protein 42 OS=Oryza sativa
subsp. japonica GN=Os06g0519400 PE=2 SV=1
Length = 279
Score = 120 bits (301), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/144 (43%), Positives = 77/144 (53%), Gaps = 24/144 (16%)
Query: 44 ESYPQRHGVPDCVFYMRTGVCGYGDRCRYNHPRNRAAVEAAVRATGDYPDRPGEPICQFY 103
+ YP+R GVPDC +Y+ G C +G RC YNHP A + ++P RPGE C Y
Sbjct: 74 QEYPRRPGVPDCSYYVEFGSCKFGMRCLYNHPAKHAGGCDKL----EHPQRPGEHDCLHY 129
Query: 104 LKTGTCKFGASCKFHHP------------------KHSGG--SMSHVPLNIYGYPLRPGE 143
L+ G CK+G +C+F+HP HS G HV LN G PLRPG
Sbjct: 130 LRFGRCKYGMNCRFNHPPDRLPQQQVYFPWKACHCHHSEGKSEAEHVKLNFLGLPLRPGT 189
Query: 144 KECSYYLKTGQCKFGITCKFHHPQ 167
CSYY+ G CKFG CKFHHP
Sbjct: 190 GLCSYYMNRGICKFGSNCKFHHPN 213
Score = 83.6 bits (205), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 74/151 (49%), Gaps = 27/151 (17%)
Query: 239 ASVSPVLSPGAQPAVGATSLYGVTQISSSMPALAGLYPSLPSSAGPSSSGQMEQSFPERP 298
A+V P P +P V S Y + S + LY AG G + P+RP
Sbjct: 69 AAVEPQEYP-RRPGVPDCSYY--VEFGSCKFGMRCLYNHPAKHAG----GCDKLEHPQRP 121
Query: 299 GEPECQYFLKTGDCKFGSSCRFHHPRDRV------VPRTNC--------------ALSPL 338
GE +C ++L+ G CK+G +CRF+HP DR+ P C L+ L
Sbjct: 122 GEHDCLHYLRFGRCKYGMNCRFNHPPDRLPQQQVYFPWKACHCHHSEGKSEAEHVKLNFL 181
Query: 339 GLPLRPGAQPCTFYLQNGRCKFGATCKFDHP 369
GLPLRPG C++Y+ G CKFG+ CKF HP
Sbjct: 182 GLPLRPGTGLCSYYMNRGICKFGSNCKFHHP 212
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 48/101 (47%), Gaps = 21/101 (20%)
Query: 46 YPQRHGVPDCVFYMRTGVCGYGDRCRYNHPRNR---------------------AAVEAA 84
+PQR G DC+ Y+R G C YG CR+NHP +R + E
Sbjct: 117 HPQRPGEHDCLHYLRFGRCKYGMNCRFNHPPDRLPQQQVYFPWKACHCHHSEGKSEAEHV 176
Query: 85 VRATGDYPDRPGEPICQFYLKTGTCKFGASCKFHHPKHSGG 125
P RPG +C +Y+ G CKFG++CKFHHP G
Sbjct: 177 KLNFLGLPLRPGTGLCSYYMNRGICKFGSNCKFHHPNSGSG 217
Score = 34.3 bits (77), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 47 PQRHGVPDCVFYMRTGVCGYGDRCRYNHPRNRAAVE 82
P R G C +YM G+C +G C+++HP + + E
Sbjct: 184 PLRPGTGLCSYYMNRGICKFGSNCKFHHPNSGSGHE 219
>sp|Q3ECU8|C3H13_ARATH Zinc finger CCCH domain-containing protein 13 OS=Arabidopsis
thaliana GN=At1g48195 PE=4 SV=1
Length = 82
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 52/78 (66%)
Query: 291 EQSFPERPGEPECQYFLKTGDCKFGSSCRFHHPRDRVVPRTNCALSPLGLPLRPGAQPCT 350
E+ FPERPGEPEC Y+L+TG+C +C++HHP++ C L+ GLPLRPG C
Sbjct: 3 EEKFPERPGEPECSYYLRTGNCYLKQNCKYHHPKNITPSEPQCTLNDKGLPLRPGQAICP 62
Query: 351 FYLQNGRCKFGATCKFDH 368
Y + G C+ G TCKFDH
Sbjct: 63 HYSRFGICRSGPTCKFDH 80
Score = 79.3 bits (194), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 48/75 (64%)
Query: 91 YPDRPGEPICQFYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGEKECSYYL 150
+P+RPGEP C +YL+TG C +CK+HHPK+ S LN G PLRPG+ C +Y
Sbjct: 6 FPERPGEPECSYYLRTGNCYLKQNCKYHHPKNITPSEPQCTLNDKGLPLRPGQAICPHYS 65
Query: 151 KTGQCKFGITCKFHH 165
+ G C+ G TCKF H
Sbjct: 66 RFGICRSGPTCKFDH 80
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 44 ESYPQRHGVPDCVFYMRTGVCGYGDRCRYNHPRNRAAVEAAVRATGD-YPDRPGEPICQF 102
E +P+R G P+C +Y+RTG C C+Y+HP+N E P RPG+ IC
Sbjct: 4 EKFPERPGEPECSYYLRTGNCYLKQNCKYHHPKNITPSEPQCTLNDKGLPLRPGQAICPH 63
Query: 103 YLKTGTCKFGASCKFHH 119
Y + G C+ G +CKF H
Sbjct: 64 YSRFGICRSGPTCKFDH 80
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 25/38 (65%)
Query: 137 YPLRPGEKECSYYLKTGQCKFGITCKFHHPQPAGTSLP 174
+P RPGE ECSYYL+TG C CK+HHP+ S P
Sbjct: 6 FPERPGEPECSYYLRTGNCYLKQNCKYHHPKNITPSEP 43
Score = 35.4 bits (80), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 21/46 (45%)
Query: 335 LSPLGLPLRPGAQPCTFYLQNGRCKFGATCKFDHPMGAMRYSPSAS 380
+S P RPG C++YL+ G C CK+ HP P +
Sbjct: 1 MSEEKFPERPGEPECSYYLRTGNCYLKQNCKYHHPKNITPSEPQCT 46
>sp|Q9C7P1|C3H10_ARATH Putative zinc finger CCCH domain-containing protein 10
OS=Arabidopsis thaliana GN=At1g29600/At1g29610 PE=2 SV=2
Length = 389
Score = 55.8 bits (133), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 45/86 (52%), Gaps = 18/86 (20%)
Query: 91 YPDRPGEPICQFYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGEK-ECSYY 149
YP RPGE C FY+K C++G+ C ++HP PL P R G+K +C
Sbjct: 128 YPVRPGEDNCLFYMKNHLCEWGSECCYNHP----------PLQ--EIPCRIGKKLDC--- 172
Query: 150 LKTGQCKFGITCKFHHPQPA-GTSLP 174
K G CK G C F+HP+ G SLP
Sbjct: 173 -KAGACKRGSNCPFNHPKERDGDSLP 197
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 14/82 (17%)
Query: 45 SYPQRHGVPDCVFYMRTGVCGYGDRCRYNHPRNRAAVEAAVRATGDYPDRPGEPICQFYL 104
+YP R G +C+FYM+ +C +G C YNHP + P R G+ +
Sbjct: 127 AYPVRPGEDNCLFYMKNHLCEWGSECCYNHP-----------PLQEIPCRIGKKL---DC 172
Query: 105 KTGTCKFGASCKFHHPKHSGGS 126
K G CK G++C F+HPK G
Sbjct: 173 KAGACKRGSNCPFNHPKERDGD 194
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 17/78 (21%)
Query: 293 SFPERPGEPECQYFLKTGDCKFGSSCRFHHPRDRVVPRTNCALSPL-GLPLRPGAQPCTF 351
++P RPGE C +++K C++GS C ++HP PL +P R G +
Sbjct: 127 AYPVRPGEDNCLFYMKNHLCEWGSECCYNHP-------------PLQEIPCRIGKK---L 170
Query: 352 YLQNGRCKFGATCKFDHP 369
+ G CK G+ C F+HP
Sbjct: 171 DCKAGACKRGSNCPFNHP 188
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 128 SHVPLNIYGYPLRPGEKECSYYLKTGQCKFGITCKFHHP 166
SH P+ YP+RPGE C +Y+K C++G C ++HP
Sbjct: 119 SHAPVLSSAYPVRPGEDNCLFYMKNHLCEWGSECCYNHP 157
>sp|A3CEM4|C3H64_ORYSJ Putative zinc finger CCCH domain-containing protein 64 OS=Oryza
sativa subsp. japonica GN=Os12g0129500 PE=4 SV=2
Length = 527
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 288 GQMEQSFPERPGEPECQYFLKTGDCKFGSSCRFHHPRDRVVPRTNCALSPLGLPL 342
G++ Q +PERPGEP C+Y++K G+CK + C+++HP+DR +T + L L
Sbjct: 205 GKLVQ-YPERPGEPFCRYYMKFGECKHMTFCKYNHPKDRFSCKTTNTIRSESLCL 258
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 78 RAAVEAAVRATGDYPDRPGEPICQFYLKTGTCKFGASCKFHHPK 121
+A V + + YP+RPGEP C++Y+K G CK CK++HPK
Sbjct: 197 KAGVISLLGKLVQYPERPGEPFCRYYMKFGECKHMTFCKYNHPK 240
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 23/34 (67%)
Query: 134 IYGYPLRPGEKECSYYLKTGQCKFGITCKFHHPQ 167
+ YP RPGE C YY+K G+CK CK++HP+
Sbjct: 207 LVQYPERPGEPFCRYYMKFGECKHMTFCKYNHPK 240
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 46 YPQRHGVPDCVFYMRTGVCGYGDRCRYNHPRNR 78
YP+R G P C +YM+ G C + C+YNHP++R
Sbjct: 210 YPERPGEPFCRYYMKFGECKHMTFCKYNHPKDR 242
Score = 35.4 bits (80), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 341 PLRPGAQPCTFYLQNGRCKFGATCKFDHPMGAMRYSPSASSLIET 385
P RPG C +Y++ G CK CK++HP R+S ++ I +
Sbjct: 211 PERPGEPFCRYYMKFGECKHMTFCKYNHPKD--RFSCKTTNTIRS 253
>sp|Q9C7P4|C3H9_ARATH Putative zinc finger CCCH domain-containing protein 9
OS=Arabidopsis thaliana GN=At1g29570 PE=4 SV=1
Length = 321
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 33/47 (70%)
Query: 74 HPRNRAAVEAAVRATGDYPDRPGEPICQFYLKTGTCKFGASCKFHHP 120
+P+++ + +R + YP RPG+ CQFYLK G C++ +SC+F+HP
Sbjct: 35 NPQDQIQSKERMRQSSPYPVRPGKKDCQFYLKNGLCRYRSSCRFNHP 81
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 27/39 (69%)
Query: 137 YPLRPGEKECSYYLKTGQCKFGITCKFHHPQPAGTSLPA 175
YP+RPG+K+C +YLK G C++ +C+F+HP LP
Sbjct: 52 YPVRPGKKDCQFYLKNGLCRYRSSCRFNHPTQRPQELPV 90
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 12/61 (19%)
Query: 285 SSSGQMEQS--FPERPGEPECQYFLKTGDCKFGSSCRFHHPRDRVVPRTNCALSPLGLPL 342
S +M QS +P RPG+ +CQ++LK G C++ SSCRF+HP R P LP+
Sbjct: 41 QSKERMRQSSPYPVRPGKKDCQFYLKNGLCRYRSSCRFNHPTQR----------PQELPV 90
Query: 343 R 343
R
Sbjct: 91 R 91
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 24/29 (82%)
Query: 341 PLRPGAQPCTFYLQNGRCKFGATCKFDHP 369
P+RPG + C FYL+NG C++ ++C+F+HP
Sbjct: 53 PVRPGKKDCQFYLKNGLCRYRSSCRFNHP 81
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 46 YPQRHGVPDCVFYMRTGVCGYGDRCRYNHPRNRAAVEAAVRATGDYPDRP-GEPICQFYL 104
YP R G DC FY++ G+C Y CR+NHP R E VR DR EP+ Q +
Sbjct: 52 YPVRPGKKDCQFYLKNGLCRYRSSCRFNHPTQRPQ-ELPVRICKHIMDRNVAEPMYQDWR 110
Query: 105 KTGTCK 110
++ + +
Sbjct: 111 ESESER 116
>sp|O74463|YQC1_SCHPO Uncharacterized protein C1739.01 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPCC1739.01 PE=1 SV=2
Length = 547
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 31/75 (41%), Gaps = 20/75 (26%)
Query: 100 CQFYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGEKECSYYLKTGQCKFGI 159
C+F+ + GTC G +C F H L C Y+LK G CKFG
Sbjct: 47 CKFF-RNGTCTAGENCPFSHS------------------LETERPICKYFLK-GNCKFGP 86
Query: 160 TCKFHHPQPAGTSLP 174
C H P T+LP
Sbjct: 87 KCALSHALPGNTNLP 101
Score = 40.8 bits (94), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 19/65 (29%)
Query: 55 CVFYMRTGVCGYGDRCRYNHPRNRAAVEAAVRATGDYPDRPGEPICQFYLKTGTCKFGAS 114
C F+ R G C G+ C ++H ++E PIC+++LK G CKFG
Sbjct: 47 CKFF-RNGTCTAGENCPFSH-----SLETE------------RPICKYFLK-GNCKFGPK 87
Query: 115 CKFHH 119
C H
Sbjct: 88 CALSH 92
Score = 33.1 bits (74), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 27/68 (39%), Gaps = 20/68 (29%)
Query: 303 CQYFLKTGDCKFGSSCRFHHPRDRVVPRTNCALSPLGLPLRPGAQPCTFYLQNGRCKFGA 362
C++F + G C G +C F H + P C ++L+ G CKFG
Sbjct: 47 CKFF-RNGTCTAGENCPFSHSLETERPI------------------CKYFLK-GNCKFGP 86
Query: 363 TCKFDHPM 370
C H +
Sbjct: 87 KCALSHAL 94
>sp|Q8IXZ2|ZC3H3_HUMAN Zinc finger CCCH domain-containing protein 3 OS=Homo sapiens
GN=ZC3H3 PE=1 SV=3
Length = 948
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 50/122 (40%), Gaps = 31/122 (25%)
Query: 55 CVFYMRTGVCGYGDRCRYNH-PRNRAAVEAAVRATGDYPD----------RPGEPICQFY 103
C++Y R G C G+RC Y H P A VR T D + P+C ++
Sbjct: 673 CMYYNRFGRCNRGERCPYIHDPEKVAVCTRFVRGTCKKTDGTCPFSHHVSKEKMPVCSYF 732
Query: 104 LKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGEKECSYYLKTGQCKFGITCKF 163
LK G C ++C + SHV Y R E CS +LK G C G CK
Sbjct: 733 LK-GICS-NSNCPY----------SHV------YVSRKAE-VCSDFLK-GYCPLGAKCKK 772
Query: 164 HH 165
H
Sbjct: 773 KH 774
>sp|P41000|CPS3_SCHPO Protein cps3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=cps3 PE=1 SV=3
Length = 583
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 73/165 (44%), Gaps = 41/165 (24%)
Query: 303 CQYFLKTGDCKFGSSCRFHHPRDRVVPRTNCALSPLGLPLRPGAQPCTFYLQNGRCKFGA 362
C++F + G C G +C F H + +T C Y Q G CKFG+
Sbjct: 41 CKFF-RQGTCTSGKNCIFSHDLELATEKTICK-----------------YFQKGNCKFGS 82
Query: 363 TCKFDHPMGAMR------YSPSASSLIETP--VAPYPVGSLLS---------TLAPASSS 405
C +H + R ++PS +++ + ++ P+ +++S T+A A++S
Sbjct: 83 KCALEHVLPDGRKVKTRAFAPSTTAMGSSSQNISAAPMANIISNNDKILPMTTMASATAS 142
Query: 406 SD---LRPELISGSKKDSLL---SRIPSSGNTSSSSVGLIFSQTG 444
+ ++ E + K++S + S + + N S+S ++S G
Sbjct: 143 EEKNRIKDEALVIKKEESNVAIPSEVTVAANAFSASTEDVYSIVG 187
Score = 39.3 bits (90), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 17/65 (26%)
Query: 55 CVFYMRTGVCGYGDRCRYNHPRNRAAVEAAVRATGDYPDRPGEPICQFYLKTGTCKFGAS 114
C F+ R G C G C ++H +E A T IC+++ K G CKFG+
Sbjct: 41 CKFF-RQGTCTSGKNCIFSHD-----LELATEKT----------ICKYFQK-GNCKFGSK 83
Query: 115 CKFHH 119
C H
Sbjct: 84 CALEH 88
Score = 38.5 bits (88), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 30/78 (38%), Gaps = 18/78 (23%)
Query: 100 CQFYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGEKECSYYLKTGQCKFGI 159
C+F+ + GTC G +C F H L + C Y+ K G CKFG
Sbjct: 41 CKFF-RQGTCTSGKNCIFSH----------------DLELATEKTICKYFQK-GNCKFGS 82
Query: 160 TCKFHHPQPAGTSLPASA 177
C H P G + A
Sbjct: 83 KCALEHVLPDGRKVKTRA 100
>sp|Q8JFF3|MKRN1_SERQU Probable E3 ubiquitin-protein ligase makorin-1 OS=Seriola
quinqueradiata GN=mkrn1 PE=2 SV=1
Length = 435
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 16/67 (23%)
Query: 55 CVFYMRTGVCGYGDRCRYNHPRNRAAVEAAVRATGDYPDRPGEPICQFYLKTGTCKFGAS 114
C ++M G+C GD CRY+H + +P IC+F+ K G C FG
Sbjct: 24 CRYFMH-GLCKEGDNCRYSHDLTNS--------------KPAAMICKFFQK-GNCVFGDR 67
Query: 115 CKFHHPK 121
C+F H K
Sbjct: 68 CRFEHCK 74
Score = 38.9 bits (89), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 17/66 (25%)
Query: 303 CQYFLKTGDCKFGSSCRFHHPRDRVVPRTNCALSPLGLPLRPGAQPCTFYLQNGRCKFGA 362
C+YF+ G CK G +CR+ H TN +P A C F+ Q G C FG
Sbjct: 24 CRYFMH-GLCKEGDNCRYSHDL------TN---------SKPAAMICKFF-QKGNCVFGD 66
Query: 363 TCKFDH 368
C+F+H
Sbjct: 67 RCRFEH 72
Score = 36.2 bits (82), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 19/81 (23%)
Query: 103 YLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGEKECSYYLKTGQCKFGITCK 162
Y G CK G +C++ H + +P C ++ K G C FG C+
Sbjct: 26 YFMHGLCKEGDNCRYSHDLTNS---------------KPAAMICKFFQK-GNCVFGDRCR 69
Query: 163 FHHPQPA-GTSLPASAPQFYP 182
F H +PA LP APQ P
Sbjct: 70 FEHCKPAKNEELP--APQMLP 88
>sp|Q4SRI6|MKRN1_TETNG Probable E3 ubiquitin-protein ligase makorin-1 OS=Tetraodon
nigroviridis GN=mkrn1 PE=3 SV=1
Length = 372
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 16/67 (23%)
Query: 55 CVFYMRTGVCGYGDRCRYNHPRNRAAVEAAVRATGDYPDRPGEPICQFYLKTGTCKFGAS 114
C ++M G+C GD CRY+H + +P IC+F+ K G C FG
Sbjct: 24 CRYFMH-GLCKEGDNCRYSHDLTNS--------------KPAAMICKFFQK-GNCVFGER 67
Query: 115 CKFHHPK 121
C+F H K
Sbjct: 68 CRFDHCK 74
Score = 40.8 bits (94), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 32/66 (48%), Gaps = 17/66 (25%)
Query: 303 CQYFLKTGDCKFGSSCRFHHPRDRVVPRTNCALSPLGLPLRPGAQPCTFYLQNGRCKFGA 362
C+YF+ G CK G +CR+ H TN +P A C F+ Q G C FG
Sbjct: 24 CRYFMH-GLCKEGDNCRYSHDL------TN---------SKPAAMICKFF-QKGNCVFGE 66
Query: 363 TCKFDH 368
C+FDH
Sbjct: 67 RCRFDH 72
Score = 32.3 bits (72), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 20/90 (22%)
Query: 82 EAAVRATGDYPDRPG---EPICQFYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYP 138
EAAV +T P G C++++ G CK G +C++ H +
Sbjct: 3 EAAVASTVTLPVSGGWTKHVTCRYFMH-GLCKEGDNCRYSHDLTNS-------------- 47
Query: 139 LRPGEKECSYYLKTGQCKFGITCKFHHPQP 168
+P C ++ K G C FG C+F H +P
Sbjct: 48 -KPAAMICKFFQK-GNCVFGERCRFDHCKP 75
>sp|P61129|ZC3H6_HUMAN Zinc finger CCCH domain-containing protein 6 OS=Homo sapiens
GN=ZC3H6 PE=2 SV=2
Length = 1189
Score = 42.4 bits (98), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 48/124 (38%), Gaps = 39/124 (31%)
Query: 42 VNESYPQRHGVPDCVFYMRTGVCGYGDRCRYNHPRNRAAVEAAVRATGDYPDRPGEPICQ 101
+N+ + G C +++ G C GD+C+++H A +E + IC+
Sbjct: 265 INQHTVEHKGKQICKYFLE-GRCIKGDQCKFDH---DAELEKR------------KEICK 308
Query: 102 FYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGEKECSYYLKTGQCKFGITC 161
FYL+ G C G +C + H E C +Y +C G C
Sbjct: 309 FYLQ-GYCTKGENCIYMH----------------------NEFPCKFYHSGAKCYQGDNC 345
Query: 162 KFHH 165
KF H
Sbjct: 346 KFSH 349
Score = 40.4 bits (93), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 34/86 (39%), Gaps = 8/86 (9%)
Query: 290 MEQSFPERPGEPECQYFLKTGDCKFGSSCRFHHPRDRVVPRTNCALSPLGLPLR------ 343
+ Q E G+ C+YFL+ G C G C+F H + + C G +
Sbjct: 265 INQHTVEHKGKQICKYFLE-GRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIY 323
Query: 344 -PGAQPCTFYLQNGRCKFGATCKFDH 368
PC FY +C G CKF H
Sbjct: 324 MHNEFPCKFYHSGAKCYQGDNCKFSH 349
>sp|P0CS64|YTH1_CRYNJ mRNA 3'-end-processing protein YTH1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=YTH1 PE=3 SV=1
Length = 332
Score = 42.0 bits (97), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 40/96 (41%), Gaps = 10/96 (10%)
Query: 301 PECQYFLKTGDCKFGSSCRFHHPRDRVVP-----RTNCALSPLGLPLRPGAQPCTFYLQN 355
P C +F+K G C+ G C + HPRDR V R C L P + C Y
Sbjct: 125 PVCIWFVKQGKCELGGECLYFHPRDRRVECPDYNRGFCVLGPNCPRKHIRRRLCDAYAA- 183
Query: 356 GRCKFGATCKFDHPMGAMRYSPSASSLIETPVAPYP 391
G C G CK HP P A S I P+ P P
Sbjct: 184 GFCPDGKDCKLAHPSPN---RPPAESYI-NPIPPDP 215
Score = 40.4 bits (93), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 43/121 (35%), Gaps = 27/121 (22%)
Query: 55 CVFYMRTGVCGYGDRCRYNHPRNRAAVEAAVRATGDYPDRPGEPICQFYLKTGTCKFGAS 114
C Y+R +C GD C Y H N + P+C +++K G C+ G
Sbjct: 99 CKHYLRN-LCKMGDNCEYTHDFNLRTM----------------PVCIWFVKQGKCELGGE 141
Query: 115 CKFHHPKHSGGSMSHVPLNIYGY-------PLRPGEKECSYYLKTGQCKFGITCKFHHPQ 167
C + HP+ P G+ P + + G C G CK HP
Sbjct: 142 CLYFHPR---DRRVECPDYNRGFCVLGPNCPRKHIRRRLCDAYAAGFCPDGKDCKLAHPS 198
Query: 168 P 168
P
Sbjct: 199 P 199
Score = 36.2 bits (82), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 18/76 (23%)
Query: 99 ICQFYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGEKECSYYLKTGQCKFG 158
+C+ YL+ CK G +C++ H N+ P+ C +++K G+C+ G
Sbjct: 98 VCKHYLRN-LCKMGDNCEYTHD-----------FNLRTMPV------CIWFVKQGKCELG 139
Query: 159 ITCKFHHPQPAGTSLP 174
C + HP+ P
Sbjct: 140 GECLYFHPRDRRVECP 155
Score = 35.0 bits (79), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 33/76 (43%), Gaps = 9/76 (11%)
Query: 52 VPDCVFYMRTGVCGYGDRCRYNHPRNRAAVEAAVRATGDYPDRPGEP-------ICQFYL 104
+P C+++++ G C G C Y HPR+R VE G P P +C Y
Sbjct: 124 MPVCIWFVKQGKCELGGECLYFHPRDR-RVECPDYNRGFCVLGPNCPRKHIRRRLCDAY- 181
Query: 105 KTGTCKFGASCKFHHP 120
G C G CK HP
Sbjct: 182 AAGFCPDGKDCKLAHP 197
>sp|P0CS65|YTH1_CRYNB mRNA 3'-end-processing protein YTH1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=YTH1 PE=3 SV=1
Length = 332
Score = 42.0 bits (97), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 40/96 (41%), Gaps = 10/96 (10%)
Query: 301 PECQYFLKTGDCKFGSSCRFHHPRDRVVP-----RTNCALSPLGLPLRPGAQPCTFYLQN 355
P C +F+K G C+ G C + HPRDR V R C L P + C Y
Sbjct: 125 PVCIWFVKQGKCELGGECLYFHPRDRRVECPDYNRGFCVLGPNCPRKHIRRRLCDAYAA- 183
Query: 356 GRCKFGATCKFDHPMGAMRYSPSASSLIETPVAPYP 391
G C G CK HP P A S I P+ P P
Sbjct: 184 GFCPDGKDCKLAHPSPN---RPPAESYI-NPIPPDP 215
Score = 40.4 bits (93), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 43/121 (35%), Gaps = 27/121 (22%)
Query: 55 CVFYMRTGVCGYGDRCRYNHPRNRAAVEAAVRATGDYPDRPGEPICQFYLKTGTCKFGAS 114
C Y+R +C GD C Y H N + P+C +++K G C+ G
Sbjct: 99 CKHYLRN-LCKMGDNCEYTHDFNLRTM----------------PVCIWFVKQGKCELGGE 141
Query: 115 CKFHHPKHSGGSMSHVPLNIYGY-------PLRPGEKECSYYLKTGQCKFGITCKFHHPQ 167
C + HP+ P G+ P + + G C G CK HP
Sbjct: 142 CLYFHPR---DRRVECPDYNRGFCVLGPNCPRKHIRRRLCDAYAAGFCPDGKDCKLAHPS 198
Query: 168 P 168
P
Sbjct: 199 P 199
Score = 36.2 bits (82), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 18/76 (23%)
Query: 99 ICQFYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGEKECSYYLKTGQCKFG 158
+C+ YL+ CK G +C++ H N+ P+ C +++K G+C+ G
Sbjct: 98 VCKHYLRN-LCKMGDNCEYTHD-----------FNLRTMPV------CIWFVKQGKCELG 139
Query: 159 ITCKFHHPQPAGTSLP 174
C + HP+ P
Sbjct: 140 GECLYFHPRDRRVECP 155
Score = 35.0 bits (79), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 33/76 (43%), Gaps = 9/76 (11%)
Query: 52 VPDCVFYMRTGVCGYGDRCRYNHPRNRAAVEAAVRATGDYPDRPGEP-------ICQFYL 104
+P C+++++ G C G C Y HPR+R VE G P P +C Y
Sbjct: 124 MPVCIWFVKQGKCELGGECLYFHPRDR-RVECPDYNRGFCVLGPNCPRKHIRRRLCDAY- 181
Query: 105 KTGTCKFGASCKFHHP 120
G C G CK HP
Sbjct: 182 AAGFCPDGKDCKLAHP 197
>sp|Q8GVZ8|C3H48_ORYSJ Putative zinc finger CCCH domain-containing protein 48 OS=Oryza
sativa subsp. japonica GN=Os07g0139000 PE=4 SV=1
Length = 496
Score = 42.0 bits (97), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 51/136 (37%), Gaps = 35/136 (25%)
Query: 48 QRHGVPDCVFYMRTGV-CGYGDRCRYNHPRNRAAVEAAVRATGDY--------------- 91
+ H C Y G+ C G+ C+Y H + + AV + D
Sbjct: 376 EEHKTKLCAEYYSRGLGCPRGNTCKYAHGEDDLRLVVAVSSLADAGEGSSSSDSSFAALG 435
Query: 92 -PDRPGEPICQFYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGEKECSYYL 150
D+ +C+ + G C F A+C+F H + + G+KE +Y
Sbjct: 436 GEDKYKTKLCKTFTSGGLCLFAANCRFAHGE-----------------VELGKKEPCWYF 478
Query: 151 KTGQ-CKFGITCKFHH 165
+GQ C G TC F H
Sbjct: 479 FSGQTCPRGDTCGFRH 494
Score = 33.1 bits (74), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 25/66 (37%), Gaps = 16/66 (24%)
Query: 303 CQYFLKTGDCKFGSSCRFHHPRDRVVPRTNCALSPLGLPLRPGAQPCTFYLQNGRCKFGA 362
C+ F G C F ++CRF H + + +PC ++ C G
Sbjct: 445 CKTFTSGGLCLFAANCRFAHGEVELGKK----------------EPCWYFFSGQTCPRGD 488
Query: 363 TCKFDH 368
TC F H
Sbjct: 489 TCGFRH 494
>sp|Q5NU14|MKRN1_TAKRU Probable E3 ubiquitin-protein ligase makorin-1 OS=Takifugu rubripes
GN=mkrn1 PE=2 SV=1
Length = 429
Score = 42.0 bits (97), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 16/67 (23%)
Query: 55 CVFYMRTGVCGYGDRCRYNHPRNRAAVEAAVRATGDYPDRPGEPICQFYLKTGTCKFGAS 114
C ++M G+C GD CRY+H + +P +C+F+ K G C FG
Sbjct: 24 CRYFMH-GLCKEGDNCRYSHDLTSS--------------KPAAMMCKFFQK-GNCVFGER 67
Query: 115 CKFHHPK 121
C+F H K
Sbjct: 68 CRFEHCK 74
Score = 39.3 bits (90), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 17/66 (25%)
Query: 303 CQYFLKTGDCKFGSSCRFHHPRDRVVPRTNCALSPLGLPLRPGAQPCTFYLQNGRCKFGA 362
C+YF+ G CK G +CR+ H +P A C F+ Q G C FG
Sbjct: 24 CRYFMH-GLCKEGDNCRYSHDL---------------TSSKPAAMMCKFF-QKGNCVFGE 66
Query: 363 TCKFDH 368
C+F+H
Sbjct: 67 RCRFEH 72
Score = 35.8 bits (81), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 43/102 (42%), Gaps = 21/102 (20%)
Query: 82 EAAVRATGDYPDRPG---EPICQFYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYP 138
EAAV +T P G C++++ G CK G +C++ H S
Sbjct: 3 EAAVASTVTLPVTGGWTKHVTCRYFMH-GLCKEGDNCRYSHDLTSS-------------- 47
Query: 139 LRPGEKECSYYLKTGQCKFGITCKFHHPQPAGTSLPASAPQF 180
+P C ++ K G C FG C+F H +P S S PQ
Sbjct: 48 -KPAAMMCKFFQK-GNCVFGERCRFEHCKPT-KSEEVSNPQM 86
>sp|Q8N5P1|ZC3H8_HUMAN Zinc finger CCCH domain-containing protein 8 OS=Homo sapiens
GN=ZC3H8 PE=1 SV=2
Length = 291
Score = 42.0 bits (97), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 34/86 (39%), Gaps = 8/86 (9%)
Query: 290 MEQSFPERPGEPECQYFLKTGDCKFGSSCRFHHPRDRVVPRTNCALSPLGLPLR------ 343
+ Q ER G+ C+YFL+ C G C+F H + + C G R
Sbjct: 184 INQHTVERKGKQICKYFLERK-CIKGDQCKFDHDAEIEKKKEMCKFYVQGYCTRGENCLY 242
Query: 344 -PGAQPCTFYLQNGRCKFGATCKFDH 368
PC FY +C G CKF H
Sbjct: 243 LHNEYPCKFYHTGTKCYQGEYCKFSH 268
Score = 37.0 bits (84), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 50/124 (40%), Gaps = 39/124 (31%)
Query: 42 VNESYPQRHGVPDCVFYMRTGVCGYGDRCRYNHPRNRAAVEAAVRATGDYPDRPGEPICQ 101
+N+ +R G C +++ C GD+C+++H A +E + +C+
Sbjct: 184 INQHTVERKGKQICKYFLERK-CIKGDQCKFDHD---AEIEKK------------KEMCK 227
Query: 102 FYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGEKECSYYLKTGQCKFGITC 161
FY++ G C G +C + H + YP C +Y +C G C
Sbjct: 228 FYVQ-GYCTRGENCLYLHNE---------------YP-------CKFYHTGTKCYQGEYC 264
Query: 162 KFHH 165
KF H
Sbjct: 265 KFSH 268
>sp|Q8BYK8|ZC3H6_MOUSE Zinc finger CCCH domain-containing protein 6 OS=Mus musculus
GN=Zc3h6 PE=2 SV=2
Length = 1177
Score = 41.2 bits (95), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 47/124 (37%), Gaps = 39/124 (31%)
Query: 42 VNESYPQRHGVPDCVFYMRTGVCGYGDRCRYNHPRNRAAVEAAVRATGDYPDRPGEPICQ 101
+N+ + G C +++ G C GD C++NH A +E + +C+
Sbjct: 263 INQHTVEHKGKQICKYFLE-GRCIKGDHCKFNH---DAELEKK------------KEVCK 306
Query: 102 FYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGEKECSYYLKTGQCKFGITC 161
+YL+ G C G +C + H E C +Y +C G C
Sbjct: 307 YYLQ-GYCTKGENCIYMH----------------------SEFPCKFYHSGAKCYQGDKC 343
Query: 162 KFHH 165
KF H
Sbjct: 344 KFSH 347
Score = 39.7 bits (91), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 35/86 (40%), Gaps = 8/86 (9%)
Query: 290 MEQSFPERPGEPECQYFLKTGDCKFGSSCRFHHPRDRVVPRTNCALSPLGLPLR------ 343
+ Q E G+ C+YFL+ G C G C+F+H + + C G +
Sbjct: 263 INQHTVEHKGKQICKYFLE-GRCIKGDHCKFNHDAELEKKKEVCKYYLQGYCTKGENCIY 321
Query: 344 -PGAQPCTFYLQNGRCKFGATCKFDH 368
PC FY +C G CKF H
Sbjct: 322 MHSEFPCKFYHSGAKCYQGDKCKFSH 347
>sp|Q9UHC7|MKRN1_HUMAN E3 ubiquitin-protein ligase makorin-1 OS=Homo sapiens GN=MKRN1 PE=1
SV=3
Length = 482
Score = 41.2 bits (95), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 17/67 (25%)
Query: 55 CVFYMRTGVCGYGDRCRYNHPRNRAAVEAAVRATGDYPDRPGEPICQFYLKTGTCKFGAS 114
C ++M GVC GD CRY+H D D P +C+ Y + G C +G
Sbjct: 61 CRYFMH-GVCKEGDNCRYSH---------------DLSDSPYSVVCK-YFQRGYCIYGDR 103
Query: 115 CKFHHPK 121
C++ H K
Sbjct: 104 CRYEHSK 110
Score = 34.3 bits (77), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 18/80 (22%)
Query: 303 CQYFLKTGDCKFGSSCRFHHPRDRVVPRTNCALSPLGLPLRPGAQPCTFYLQNGRCKFGA 362
C+YF+ G CK G +CR+ H + + SP + + Y Q G C +G
Sbjct: 61 CRYFMH-GVCKEGDNCRYSH---------DLSDSPYSVVCK--------YFQRGYCIYGD 102
Query: 363 TCKFDHPMGAMRYSPSASSL 382
C+++H + +A+ L
Sbjct: 103 RCRYEHSKPLKQEEATATEL 122
>sp|Q1EHT7|C3H4_ORYSJ Zinc finger CCCH domain-containing protein 4 OS=Oryza sativa subsp.
japonica GN=Os01g0256800 PE=2 SV=1
Length = 1007
Score = 40.8 bits (94), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 18/65 (27%)
Query: 55 CVFYMRTGVCGYGDRCRYNHPRNRAAVEAAVRATGDYPDRPGEPICQFYLKTGTCKFGAS 114
CVF++ G C GD C ++H R PIC+F+L C+ G S
Sbjct: 729 CVFFL-NGSCNRGDTCHFSHS-----------------SRAPRPICKFFLTLQGCRNGNS 770
Query: 115 CKFHH 119
C F H
Sbjct: 771 CSFSH 775
>sp|Q9UPT8|ZC3H4_HUMAN Zinc finger CCCH domain-containing protein 4 OS=Homo sapiens
GN=ZC3H4 PE=1 SV=3
Length = 1303
Score = 40.0 bits (92), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 32/80 (40%), Gaps = 8/80 (10%)
Query: 296 ERPGEPECQYFLKTGDCKFGSSCRFHHPRDRVVPRTNCALSPLGL-------PLRPGAQP 348
++ G+ C+YF++ G C +G C F H + R C G P G P
Sbjct: 389 DKKGKVICKYFVE-GRCTWGDHCNFSHDIELPKKRELCKFYITGFCARAENCPYMHGDFP 447
Query: 349 CTFYLQNGRCKFGATCKFDH 368
C Y G C G C F H
Sbjct: 448 CKLYHTTGNCINGDDCMFSH 467
Score = 39.3 bits (90), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 8/80 (10%)
Query: 93 DRPGEPICQFYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGY-------PLRPGEKE 145
D+ G+ IC+++++ G C +G C F H I G+ P G+
Sbjct: 389 DKKGKVICKYFVE-GRCTWGDHCNFSHDIELPKKRELCKFYITGFCARAENCPYMHGDFP 447
Query: 146 CSYYLKTGQCKFGITCKFHH 165
C Y TG C G C F H
Sbjct: 448 CKLYHTTGNCINGDDCMFSH 467
Score = 37.4 bits (85), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 25/65 (38%), Gaps = 22/65 (33%)
Query: 55 CVFYMRTGVCGYGDRCRYNHPRNRAAVEAAVRATGDYPDRPGEPICQFYLKTGTCKFGAS 114
C FY+ TG C + C Y H GD+P C+ Y TG C G
Sbjct: 425 CKFYI-TGFCARAENCPYMH--------------GDFP-------CKLYHTTGNCINGDD 462
Query: 115 CKFHH 119
C F H
Sbjct: 463 CMFSH 467
>sp|Q02799|LEE1_YEAST Zinc finger protein LEE1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=LEE1 PE=4 SV=1
Length = 301
Score = 40.0 bits (92), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 60/145 (41%), Gaps = 26/145 (17%)
Query: 90 DYPDRPGEPICQFYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGEKECSYY 149
DY P C+F+ K G C+ G+SC F H S +++P C Y+
Sbjct: 87 DYSHVP----CKFF-KMGNCQAGSSCPFSHSPDIISSANNLP--------------CKYF 127
Query: 150 LKTGQCKFGITCKFHHPQPAGTSLPASAP-QFYPPVQSPTVPMAEQYGGASTSLRVARPP 208
K G CKFG C H P G + + P PP Q+ + A AS S + PP
Sbjct: 128 AK-GNCKFGNKCVNAHVLPNGFKMNSKEPIDITPPSQNNYLSHAR---SASFSTYTS-PP 182
Query: 209 LLA-SSYVQGAYGPVLFSPGVVPFS 232
L A + + A FS + +S
Sbjct: 183 LSAQTEFSHSASNANYFSSQYLMYS 207
Score = 37.4 bits (85), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 15/65 (23%)
Query: 306 FLKTGDCKFGSSCRFHHPRDRVVPRTNCALSPLGLPLRPGAQPCTFYLQNGRCKFGATCK 365
F K G+C+ GSSC F H D + N PC ++ + G CKFG C
Sbjct: 95 FFKMGNCQAGSSCPFSHSPDIISSANNL--------------PCKYFAK-GNCKFGNKCV 139
Query: 366 FDHPM 370
H +
Sbjct: 140 NAHVL 144
>sp|Q9QXP6|MKRN1_MOUSE E3 ubiquitin-protein ligase makorin-1 OS=Mus musculus GN=Mkrn1 PE=2
SV=1
Length = 481
Score = 40.0 bits (92), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 17/67 (25%)
Query: 55 CVFYMRTGVCGYGDRCRYNHPRNRAAVEAAVRATGDYPDRPGEPICQFYLKTGTCKFGAS 114
C ++M GVC GD CRY+H D D P +C+ Y + G C +G
Sbjct: 61 CRYFMH-GVCKEGDNCRYSH---------------DLSDSPYGVVCK-YFQRGYCVYGDR 103
Query: 115 CKFHHPK 121
C++ H K
Sbjct: 104 CRYEHSK 110
Score = 37.0 bits (84), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 18/84 (21%)
Query: 303 CQYFLKTGDCKFGSSCRFHHPRDRVVPRTNCALSPLGLPLRPGAQPCTFYLQNGRCKFGA 362
C+YF+ G CK G +CR+ H + + SP G+ + Y Q G C +G
Sbjct: 61 CRYFMH-GVCKEGDNCRYSH---------DLSDSPYGVVCK--------YFQRGYCVYGD 102
Query: 363 TCKFDHPMGAMRYSPSASSLIETP 386
C+++H + +A+ L P
Sbjct: 103 RCRYEHSKPLKQEEVTATDLSAKP 126
>sp|Q9JJ48|ZC3H8_MOUSE Zinc finger CCCH domain-containing protein 8 OS=Mus musculus
GN=Zc3h8 PE=1 SV=2
Length = 305
Score = 39.7 bits (91), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 35/90 (38%), Gaps = 8/90 (8%)
Query: 286 SSGQMEQSFPERPGEPECQYFLKTGDCKFGSSCRFHHPRDRVVPRTNCALSPLGLPLR-- 343
S G + Q ER G+ C+YFL+ C G C+F H + + C G +
Sbjct: 194 SQGFINQHTVERKGKQVCKYFLERK-CIKGDQCKFDHDAEIEKKKEMCKYYVQGYCTKGE 252
Query: 344 -----PGAQPCTFYLQNGRCKFGATCKFDH 368
PC FY +C G C F H
Sbjct: 253 NCLYLHSEYPCKFYHTGTKCYQGDHCNFSH 282
Score = 34.3 bits (77), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 49/124 (39%), Gaps = 39/124 (31%)
Query: 42 VNESYPQRHGVPDCVFYMRTGVCGYGDRCRYNHPRNRAAVEAAVRATGDYPDRPGEPICQ 101
+N+ +R G C +++ C GD+C+++H A +E + +C+
Sbjct: 198 INQHTVERKGKQVCKYFLERK-CIKGDQCKFDHD---AEIEKK------------KEMCK 241
Query: 102 FYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGEKECSYYLKTGQCKFGITC 161
+Y++ G C G +C + H + YP C +Y +C G C
Sbjct: 242 YYVQ-GYCTKGENCLYLHSE---------------YP-------CKFYHTGTKCYQGDHC 278
Query: 162 KFHH 165
F H
Sbjct: 279 NFSH 282
>sp|Q6ZPZ3|ZC3H4_MOUSE Zinc finger CCCH domain-containing protein 4 OS=Mus musculus
GN=Zc3h4 PE=1 SV=2
Length = 1304
Score = 39.7 bits (91), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 28/73 (38%), Gaps = 8/73 (10%)
Query: 303 CQYFLKTGDCKFGSSCRFHHPRDRVVPRTNCALSPLGL-------PLRPGAQPCTFYLQN 355
C+YF++ G C +G C F H + R C G P G PC Y
Sbjct: 395 CKYFVE-GRCTWGDHCNFSHDIELPKKRELCKFYITGFCARAENCPYMHGDFPCKLYHTT 453
Query: 356 GRCKFGATCKFDH 368
G C G C F H
Sbjct: 454 GNCINGDDCMFSH 466
Score = 38.9 bits (89), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 40/111 (36%), Gaps = 39/111 (35%)
Query: 55 CVFYMRTGVCGYGDRCRYNHPRNRAAVEAAVRATGDYPDRPGEPICQFYLKTGTCKFGAS 114
C +++ G C +GD C ++H +E + +C+FY+ TG C +
Sbjct: 395 CKYFVE-GRCTWGDHCNFSH-----DIELPKKRE----------LCKFYI-TGFCARAEN 437
Query: 115 CKFHHPKHSGGSMSHVPLNIYGYPLRPGEKECSYYLKTGQCKFGITCKFHH 165
C + H G+ C Y TG C G C F H
Sbjct: 438 CPYMH----------------------GDFPCKLYHTTGNCINGDDCMFSH 466
>sp|A2ZVY5|C3H9_ORYSJ Zinc finger CCCH domain-containing protein 9 OS=Oryza sativa subsp.
japonica GN=Os01g0645000 PE=2 SV=1
Length = 333
Score = 39.3 bits (90), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 46/111 (41%), Gaps = 24/111 (21%)
Query: 12 NGSQSGHQPQWSPTDQATGLE---ESMWQSDLKVNESYPQRHGVPDCVFYMRTGVCGYGD 68
+G + G + + P D LE + M++++L C + TG C YGD
Sbjct: 232 DGGKKGDEQKAQPADSGAELEVYNQGMFKTEL--------------CNKWEETGDCPYGD 277
Query: 69 RCRYNHPRNRAAVEAAVRATGDYPDRPGEPICQFYLKTGTCKFGASCKFHH 119
+C++ H E +R +P R +C+ L C +G C F H
Sbjct: 278 QCQFAH----GVTE--LRPVIRHP-RYKTAVCRMVLAGDVCPYGHRCHFRH 321
Score = 33.9 bits (76), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 36/91 (39%), Gaps = 9/91 (9%)
Query: 281 SAGPSSSGQMEQSFPERPGEPE-CQYFLKTGDCKFGSSCRFHHPRDRVVPRTNCALSPLG 339
A P+ SG + + + + E C + +TGDC +G C+F H L P+
Sbjct: 241 KAQPADSGAELEVYNQGMFKTELCNKWEETGDCPYGDQCQFAH--------GVTELRPVI 292
Query: 340 LPLRPGAQPCTFYLQNGRCKFGATCKFDHPM 370
R C L C +G C F H +
Sbjct: 293 RHPRYKTAVCRMVLAGDVCPYGHRCHFRHSL 323
>sp|Q13434|MKRN4_HUMAN Putative E3 ubiquitin-protein ligase makorin-4 OS=Homo sapiens
GN=MKRN4P PE=5 SV=1
Length = 485
Score = 39.3 bits (90), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 16/64 (25%)
Query: 58 YMRTGVCGYGDRCRYNHPRNRAAVEAAVRATGDYPDRPGEPICQFYLKTGTCKFGASCKF 117
Y + G+C GD CRY+H D DR +C+ Y + G C +G C+
Sbjct: 98 YFKYGICKEGDNCRYSH---------------DLSDRLCGVVCK-YFQRGCCVYGDRCRC 141
Query: 118 HHPK 121
H K
Sbjct: 142 EHSK 145
>sp|Q8CHP0|ZC3H3_MOUSE Zinc finger CCCH domain-containing protein 3 OS=Mus musculus
GN=Zc3h3 PE=2 SV=1
Length = 950
Score = 38.9 bits (89), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 49/122 (40%), Gaps = 31/122 (25%)
Query: 55 CVFYMRTGVCGYGDRCRYNH-PRNRAAVEAAVRATGDYPD----------RPGEPICQFY 103
C++Y R G C G+ C Y H P A VR T D + P+C ++
Sbjct: 668 CMYYNRFGRCNRGECCPYIHDPEKVAVCTRFVRGTCKKTDGSCPFSHHVSKEKMPVCSYF 727
Query: 104 LKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGEKECSYYLKTGQCKFGITCKF 163
LK G C ++C + SHV Y R E CS +LK G C G CK
Sbjct: 728 LK-GICS-NSNCPY----------SHV------YVSRKAE-VCSDFLK-GYCPLGAKCKK 767
Query: 164 HH 165
H
Sbjct: 768 KH 769
>sp|Q9LTS7|C3H65_ARATH Zinc finger CCCH domain-containing protein 65 OS=Arabidopsis
thaliana GN=EMB1789 PE=2 SV=1
Length = 675
Score = 38.5 bits (88), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 45/121 (37%), Gaps = 40/121 (33%)
Query: 55 CVFYMRTGVCGYGDRCRYNHPRNRAAVEAAVRATGDYPDRPGEPICQFYLKTGTCKFGAS 114
C Y++ G C GD+C+++H P+ P C Y T +C G
Sbjct: 356 CRHYLK-GRCHEGDKCKFSH--------------DTIPETKCSPCC--YFATQSCMKGDD 398
Query: 115 CKFHHPKHSGGSMSHVPLNIYGYPLRPGEKECSYYLKTGQCKFGITCKFHH---PQPAGT 171
C F H ++ YP C+ ++ G C G +C F H PQ A
Sbjct: 399 CPFDH-------------DLSKYP-------CNNFITKGFCYRGDSCLFSHKGTPQSASD 438
Query: 172 S 172
+
Sbjct: 439 T 439
Score = 34.7 bits (78), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 59/151 (39%), Gaps = 33/151 (21%)
Query: 303 CQYFLKTGDCKFGSSCRFHHPRDRVVPRTNCA--------------LSPLGLPLRPGAQP 348
C+++LK G C G C+F H +P T C+ P L P
Sbjct: 356 CRHYLK-GRCHEGDKCKFSHD---TIPETKCSPCCYFATQSCMKGDDCPFDHDL--SKYP 409
Query: 349 CTFYLQNGRCKFGATCKFDHPMGAMRYSPSASSLIETPVAPYPVGSLLSTLAPASSSSDL 408
C ++ G C G +C F H + +P ++S +TP A V S T A S
Sbjct: 410 CNNFITKGFCYRGDSCLFSH-----KGTPQSAS--DTPSANVTVSSTKITAASFS----- 457
Query: 409 RPELISGSKKDSLLSRIPSSGNTSSSSVGLI 439
P+ ++++P+ SSSV +
Sbjct: 458 -PQKTKKQSVRDAIAKLPAIQARVSSSVAFL 487
>sp|Q6L5G1|C3H39_ORYSJ Zinc finger CCCH domain-containing protein 39 OS=Oryza sativa
subsp. japonica GN=Os05g0576300 PE=2 SV=1
Length = 343
Score = 38.5 bits (88), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 7/65 (10%)
Query: 55 CVFYMRTGVCGYGDRCRYNHPRNRAAVEAAVRATGDYPDRPGEPICQFYLKTGTCKFGAS 114
C + TG C YGD+C++ H A +R +P R +C+ L G C +G
Sbjct: 274 CNKWEETGACPYGDQCQFAHG------VAELRPVIRHP-RYKTQVCRMVLAGGVCPYGHR 326
Query: 115 CKFHH 119
C F H
Sbjct: 327 CHFRH 331
Score = 33.9 bits (76), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 8/68 (11%)
Query: 303 CQYFLKTGDCKFGSSCRFHHPRDRVVPRTNCALSPLGLPLRPGAQPCTFYLQNGRCKFGA 362
C + +TG C +G C+F H L P+ R Q C L G C +G
Sbjct: 274 CNKWEETGACPYGDQCQFAH--------GVAELRPVIRHPRYKTQVCRMVLAGGVCPYGH 325
Query: 363 TCKFDHPM 370
C F H +
Sbjct: 326 RCHFRHSI 333
>sp|Q3ED78|C3H7_ARATH Zinc finger CCCH domain-containing protein 7 OS=Arabidopsis
thaliana GN=At1g21570 PE=1 SV=1
Length = 470
Score = 38.1 bits (87), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 33/85 (38%), Gaps = 28/85 (32%)
Query: 43 NESYPQRHG-----VPDCVFYMRTGVCGYGDRCRYNHPRNRAAVEAAVRATGDYPDRPGE 97
NE+ P RH P C +++ G C GD CR H N
Sbjct: 311 NEACPYRHVHVNPIAPICDGFLK-GYCSEGDECRKKHSYN-------------------- 349
Query: 98 PICQFYLKTGTCKFGASCKFHHPKH 122
C + TG+C G CK HHPK+
Sbjct: 350 --CPVFEATGSCSQGLKCKLHHPKN 372
Score = 37.4 bits (85), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 47/121 (38%), Gaps = 44/121 (36%)
Query: 47 PQRHGVPDCVFYMRTGVCGYGDRCRYNHPRNRAAVEAAVRATGDYPDRPGEPICQFYLKT 106
P+R +PDC +Y++ G+C + C Y H V P PIC +LK
Sbjct: 295 PER--MPDCSYYLQ-GLCN-NEACPYRH----------VHVN------PIAPICDGFLK- 333
Query: 107 GTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGEKECSYYLKTGQCKFGITCKFHHP 166
G C G C+ KHS C + TG C G+ CK HHP
Sbjct: 334 GYCSEGDECR---KKHSYN--------------------CPVFEATGSCSQGLKCKLHHP 370
Query: 167 Q 167
+
Sbjct: 371 K 371
>sp|Q6P5D3|DHX57_MOUSE Putative ATP-dependent RNA helicase DHX57 OS=Mus musculus GN=Dhx57
PE=2 SV=2
Length = 1388
Score = 38.1 bits (87), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Query: 287 SGQMEQSFPERPGEPE-CQYFLKTGDCKFGSSCRFHH 322
S Q E S R PE C+++LK G+CKFGS C+F H
Sbjct: 288 SKQKESSKNVRDTSPETCKFYLK-GNCKFGSKCKFKH 323
Score = 37.0 bits (84), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 14/20 (70%), Positives = 16/20 (80%), Gaps = 1/20 (5%)
Query: 100 CQFYLKTGTCKFGASCKFHH 119
C+FYLK G CKFG+ CKF H
Sbjct: 305 CKFYLK-GNCKFGSKCKFKH 323
Score = 35.0 bits (79), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
Query: 347 QPCTFYLQNGRCKFGATCKFDHPM 370
+ C FYL+ G CKFG+ CKF H +
Sbjct: 303 ETCKFYLK-GNCKFGSKCKFKHEV 325
Score = 34.7 bits (78), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/23 (60%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Query: 146 CSYYLKTGQCKFGITCKFHHPQP 168
C +YLK G CKFG CKF H P
Sbjct: 305 CKFYLK-GNCKFGSKCKFKHEVP 326
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.132 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 198,133,164
Number of Sequences: 539616
Number of extensions: 9026844
Number of successful extensions: 28185
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 105
Number of HSP's successfully gapped in prelim test: 314
Number of HSP's that attempted gapping in prelim test: 25210
Number of HSP's gapped (non-prelim): 2275
length of query: 477
length of database: 191,569,459
effective HSP length: 121
effective length of query: 356
effective length of database: 126,275,923
effective search space: 44954228588
effective search space used: 44954228588
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)