Query 011777
Match_columns 477
No_of_seqs 337 out of 2713
Neff 9.1
Searched_HMMs 46136
Date Fri Mar 29 05:07:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011777.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011777hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1404 Alanine-glyoxylate ami 100.0 1.2E-93 2.6E-98 670.6 39.7 422 48-470 2-432 (442)
2 COG0160 GabT 4-aminobutyrate a 100.0 4.6E-91 9.9E-96 689.2 47.5 422 52-476 13-445 (447)
3 COG4992 ArgD Ornithine/acetylo 100.0 2.6E-89 5.7E-94 656.6 41.3 389 56-476 5-398 (404)
4 COG0161 BioA Adenosylmethionin 100.0 2.7E-78 5.8E-83 594.0 39.7 410 63-476 8-443 (449)
5 PRK07678 aminotransferase; Val 100.0 1.2E-76 2.5E-81 606.7 46.0 421 55-477 5-450 (451)
6 PRK05965 hypothetical protein; 100.0 1.3E-76 2.8E-81 607.1 45.0 416 57-476 3-447 (459)
7 PRK07482 hypothetical protein; 100.0 4E-76 8.7E-81 603.7 45.3 420 55-476 3-454 (461)
8 PRK06058 4-aminobutyrate amino 100.0 2.5E-75 5.4E-80 597.2 46.9 419 52-477 14-443 (443)
9 PRK06938 diaminobutyrate--2-ox 100.0 2E-75 4.4E-80 597.8 45.4 417 58-476 25-460 (464)
10 PRK06062 hypothetical protein; 100.0 2.3E-75 4.9E-80 596.6 44.2 415 58-476 14-445 (451)
11 PRK05639 4-aminobutyrate amino 100.0 6.7E-75 1.5E-79 592.8 46.0 420 52-476 10-443 (457)
12 PRK07481 hypothetical protein; 100.0 5.1E-75 1.1E-79 594.3 44.7 396 78-477 24-446 (449)
13 PRK06931 diaminobutyrate--2-ox 100.0 7.4E-75 1.6E-79 593.5 45.3 419 56-476 18-454 (459)
14 PRK07483 hypothetical protein; 100.0 6.5E-75 1.4E-79 591.9 44.3 399 77-476 11-437 (443)
15 PRK08742 adenosylmethionine--8 100.0 4.1E-74 8.8E-79 588.0 46.2 417 54-476 17-467 (472)
16 TIGR03372 putres_am_tran putre 100.0 1.5E-74 3.2E-79 585.9 40.9 395 57-474 28-442 (442)
17 PRK06943 adenosylmethionine--8 100.0 7.1E-74 1.5E-78 585.3 45.5 411 57-476 11-446 (453)
18 PRK06916 adenosylmethionine--8 100.0 1.4E-73 3.1E-78 584.7 46.1 416 56-477 12-456 (460)
19 PRK07030 adenosylmethionine--8 100.0 1.2E-73 2.7E-78 584.9 45.0 392 79-476 30-446 (466)
20 PRK06082 4-aminobutyrate amino 100.0 3.3E-73 7.1E-78 581.3 46.6 418 50-476 27-451 (459)
21 PRK06148 hypothetical protein; 100.0 2.6E-73 5.6E-78 628.7 48.8 418 56-476 584-1010(1013)
22 PRK07480 putative aminotransfe 100.0 2.2E-73 4.7E-78 582.2 44.6 414 58-476 8-448 (456)
23 PRK07036 hypothetical protein; 100.0 3.9E-73 8.4E-78 581.9 46.3 413 59-476 10-452 (466)
24 PRK06105 aminotransferase; Pro 100.0 6.1E-73 1.3E-77 580.1 46.3 414 58-476 6-449 (460)
25 PRK11522 putrescine--2-oxoglut 100.0 3E-73 6.6E-78 580.3 43.0 397 58-476 36-451 (459)
26 PRK07495 4-aminobutyrate amino 100.0 1.5E-72 3.2E-77 572.3 47.1 412 58-476 4-421 (425)
27 PRK08593 4-aminobutyrate amino 100.0 1.1E-72 2.3E-77 576.5 46.4 417 56-476 3-429 (445)
28 TIGR00709 dat 2,4-diaminobutyr 100.0 3.5E-73 7.7E-78 580.6 42.4 397 78-476 21-435 (442)
29 PLN02760 4-aminobutyrate:pyruv 100.0 1E-72 2.3E-77 581.4 44.7 414 58-476 48-491 (504)
30 PRK06917 hypothetical protein; 100.0 1.8E-72 4E-77 574.6 44.7 395 81-476 16-437 (447)
31 PRK06541 hypothetical protein; 100.0 3.4E-72 7.3E-77 574.0 46.3 419 56-476 8-455 (460)
32 PRK12403 putative aminotransfe 100.0 5.3E-72 1.2E-76 573.1 46.4 415 58-476 12-452 (460)
33 PRK06918 4-aminobutyrate amino 100.0 7.9E-72 1.7E-76 573.0 47.2 423 51-476 11-443 (451)
34 KOG1402 Ornithine aminotransfe 100.0 7.5E-73 1.6E-77 518.0 34.8 394 54-475 20-426 (427)
35 PRK05769 4-aminobutyrate amino 100.0 1.1E-71 2.4E-76 568.3 47.4 417 51-476 11-439 (441)
36 PRK06777 4-aminobutyrate amino 100.0 9.4E-71 2E-75 559.8 47.4 412 57-475 3-420 (421)
37 PRK08360 4-aminobutyrate amino 100.0 1.1E-70 2.3E-75 560.9 47.9 417 56-476 2-426 (443)
38 PRK08117 4-aminobutyrate amino 100.0 1.1E-70 2.3E-75 563.1 46.6 416 57-476 5-429 (433)
39 TIGR00700 GABAtrnsam 4-aminobu 100.0 1.2E-70 2.6E-75 560.1 44.9 397 77-475 14-419 (420)
40 PRK06149 hypothetical protein; 100.0 1.2E-70 2.6E-75 607.8 48.3 421 53-476 542-970 (972)
41 PRK09792 4-aminobutyrate trans 100.0 4.9E-70 1.1E-74 554.6 46.9 410 59-475 5-420 (421)
42 PRK13360 omega amino acid--pyr 100.0 2E-70 4.4E-75 558.7 43.6 393 77-477 27-441 (442)
43 TIGR00699 GABAtrns_euk 4-amino 100.0 6E-70 1.3E-74 552.6 42.9 411 39-474 7-464 (464)
44 PRK05630 adenosylmethionine--8 100.0 3.8E-70 8.3E-75 553.5 40.9 381 78-476 22-420 (422)
45 PRK09221 beta alanine--pyruvat 100.0 7.8E-70 1.7E-74 554.9 42.8 393 77-477 30-444 (445)
46 PRK06173 adenosylmethionine--8 100.0 1E-69 2.2E-74 551.0 42.3 402 58-476 4-425 (429)
47 PRK07986 adenosylmethionine--8 100.0 1.8E-69 3.9E-74 548.4 40.9 381 79-476 26-423 (428)
48 COG0001 HemL Glutamate-1-semia 100.0 6.1E-69 1.3E-73 521.2 39.5 409 54-477 4-429 (432)
49 KOG1403 Predicted alanine-glyo 100.0 5.2E-70 1.1E-74 493.3 28.6 412 57-475 7-436 (452)
50 PRK12389 glutamate-1-semialdeh 100.0 3.2E-68 6.9E-73 542.4 44.8 408 54-477 3-428 (428)
51 PLN02482 glutamate-1-semialdeh 100.0 3.9E-68 8.4E-73 542.9 45.1 411 52-477 48-474 (474)
52 PRK04612 argD acetylornithine 100.0 2.3E-68 5E-73 538.7 42.7 374 77-476 21-403 (408)
53 TIGR02407 ectoine_ectB diamino 100.0 1.7E-68 3.7E-73 541.8 41.6 384 78-476 17-412 (412)
54 PRK04013 argD acetylornithine/ 100.0 1.7E-68 3.6E-73 529.8 39.2 355 76-476 4-360 (364)
55 PRK09264 diaminobutyrate--2-ox 100.0 5.5E-68 1.2E-72 540.6 41.4 384 78-476 21-416 (425)
56 PRK05964 adenosylmethionine--8 100.0 3.5E-67 7.6E-72 535.5 43.3 383 78-477 24-423 (423)
57 PLN00144 acetylornithine trans 100.0 4.9E-67 1.1E-71 526.4 39.8 366 82-477 1-381 (382)
58 TIGR03246 arg_catab_astC succi 100.0 1.8E-66 4E-71 526.3 42.5 372 77-476 16-395 (397)
59 PRK07046 aminotransferase; Val 100.0 3.8E-66 8.1E-71 527.9 43.6 401 54-476 27-450 (453)
60 PRK08297 L-lysine aminotransfe 100.0 3.8E-66 8.2E-71 527.5 42.0 382 79-477 27-442 (443)
61 PRK03715 argD acetylornithine 100.0 4.5E-66 9.7E-71 520.9 39.9 368 77-477 17-394 (395)
62 PRK00615 glutamate-1-semialdeh 100.0 3.4E-65 7.4E-70 517.4 43.7 405 55-476 5-428 (433)
63 KOG1401 Acetylornithine aminot 100.0 6.3E-66 1.4E-70 487.7 34.7 378 75-477 35-431 (433)
64 PRK12381 bifunctional succinyl 100.0 3.1E-65 6.8E-70 518.7 41.9 372 77-476 20-399 (406)
65 PLN02624 ornithine-delta-amino 100.0 2.9E-64 6.3E-69 518.4 47.6 395 56-476 38-444 (474)
66 PLN02974 adenosylmethionine-8- 100.0 2.2E-64 4.9E-69 538.5 44.0 415 55-474 312-816 (817)
67 TIGR03251 LAT_fam L-lysine 6-t 100.0 3.1E-64 6.8E-69 513.1 40.1 394 60-473 4-431 (431)
68 PRK08088 4-aminobutyrate amino 100.0 5.8E-63 1.3E-67 504.7 47.3 414 57-476 4-423 (425)
69 TIGR00508 bioA adenosylmethion 100.0 1.1E-63 2.3E-68 508.1 41.5 405 55-476 2-426 (427)
70 PRK04073 rocD ornithine--oxo-a 100.0 1.9E-63 4.1E-68 504.9 42.2 382 56-474 3-395 (396)
71 PF00202 Aminotran_3: Aminotra 100.0 4.3E-65 9.2E-70 503.9 27.7 329 81-413 1-338 (339)
72 PRK01278 argD acetylornithine 100.0 9.7E-63 2.1E-67 499.1 42.8 369 77-477 12-389 (389)
73 TIGR00713 hemL glutamate-1-sem 100.0 1.8E-62 3.8E-67 502.2 42.7 407 56-477 1-423 (423)
74 PRK00062 glutamate-1-semialdeh 100.0 1.4E-61 2.9E-66 494.2 41.8 408 55-477 2-425 (426)
75 PRK05093 argD bifunctional N-s 100.0 3.1E-60 6.8E-65 482.4 43.3 372 77-476 21-400 (403)
76 PRK03244 argD acetylornithine 100.0 1.9E-59 4.2E-64 476.6 42.8 384 58-476 8-394 (398)
77 PRK02936 argD acetylornithine 100.0 2E-59 4.4E-64 473.2 41.5 366 77-474 10-377 (377)
78 TIGR01885 Orn_aminotrans ornit 100.0 3.5E-58 7.5E-63 467.3 42.8 388 58-474 2-400 (401)
79 PRK06209 glutamate-1-semialdeh 100.0 4.1E-58 8.9E-63 468.1 41.1 387 57-476 1-405 (431)
80 PRK00854 rocD ornithine--oxo-a 100.0 1.9E-57 4.2E-62 462.3 43.4 385 57-475 5-400 (401)
81 PRK02627 acetylornithine amino 100.0 2.5E-57 5.4E-62 461.2 43.1 386 56-476 2-394 (396)
82 PTZ00125 ornithine aminotransf 100.0 7.7E-57 1.7E-61 458.0 42.1 373 77-476 12-395 (400)
83 PRK04260 acetylornithine amino 100.0 2.4E-56 5.1E-61 450.1 41.5 364 77-474 10-375 (375)
84 cd00610 OAT_like Acetyl ornith 100.0 8.3E-56 1.8E-60 452.5 43.8 404 64-474 5-413 (413)
85 KOG1405 4-aminobutyrate aminot 100.0 3.3E-54 7.2E-59 398.4 28.4 422 34-477 19-484 (484)
86 TIGR00707 argD acetylornithine 100.0 5.2E-50 1.1E-54 405.1 40.4 365 77-474 8-379 (379)
87 PRK07505 hypothetical protein; 100.0 8.1E-39 1.8E-43 325.4 35.2 348 78-476 28-399 (402)
88 PLN02822 serine palmitoyltrans 100.0 4.8E-36 1E-40 309.3 32.5 354 80-476 94-477 (481)
89 PRK13393 5-aminolevulinate syn 100.0 7.4E-34 1.6E-38 289.4 33.8 331 94-476 43-396 (406)
90 PRK09064 5-aminolevulinate syn 100.0 2.6E-32 5.7E-37 278.3 33.7 331 95-476 45-397 (407)
91 TIGR01821 5aminolev_synth 5-am 100.0 3.5E-32 7.7E-37 276.8 34.5 333 93-476 42-396 (402)
92 PRK05958 8-amino-7-oxononanoat 100.0 2.4E-31 5.1E-36 269.4 34.5 347 76-474 20-385 (385)
93 PRK07179 hypothetical protein; 100.0 1.9E-31 4.2E-36 271.8 33.9 337 75-476 41-398 (407)
94 TIGR01825 gly_Cac_T_rel pyrido 100.0 6.8E-31 1.5E-35 266.1 35.0 348 76-476 14-381 (385)
95 PRK06939 2-amino-3-ketobutyrat 100.0 1.4E-29 2.9E-34 257.6 35.1 347 79-476 25-393 (397)
96 PLN03227 serine palmitoyltrans 100.0 7.4E-30 1.6E-34 257.7 32.0 339 99-476 1-382 (392)
97 TIGR01822 2am3keto_CoA 2-amino 100.0 5.1E-29 1.1E-33 253.1 34.6 351 76-476 18-389 (393)
98 TIGR00858 bioF 8-amino-7-oxono 100.0 1.5E-28 3.2E-33 246.5 33.5 337 83-471 4-360 (360)
99 COG0436 Aspartate/tyrosine/aro 100.0 1.7E-28 3.7E-33 246.4 30.0 340 96-476 28-391 (393)
100 PRK13392 5-aminolevulinate syn 100.0 2.8E-28 6.1E-33 248.8 31.7 333 94-476 44-397 (410)
101 PLN02955 8-amino-7-oxononanoat 100.0 4E-27 8.7E-32 237.0 36.4 329 94-475 100-460 (476)
102 COG0156 BioF 7-keto-8-aminopel 100.0 1.7E-27 3.8E-32 234.4 30.7 329 93-473 36-387 (388)
103 PRK03317 histidinol-phosphate 100.0 6.1E-27 1.3E-31 235.6 29.2 326 97-475 27-363 (368)
104 PRK06225 aspartate aminotransf 100.0 3.5E-26 7.6E-31 231.1 31.2 338 95-476 27-376 (380)
105 PRK07682 hypothetical protein; 100.0 2.5E-26 5.4E-31 232.1 29.6 338 97-476 21-376 (378)
106 PRK06207 aspartate aminotransf 100.0 9.3E-26 2E-30 229.5 31.4 344 95-476 38-402 (405)
107 PLN00175 aminotransferase fami 100.0 9E-26 2E-30 229.9 31.1 340 97-476 55-413 (413)
108 PRK06108 aspartate aminotransf 100.0 1.2E-25 2.6E-30 227.5 31.9 338 97-475 25-381 (382)
109 PRK07324 transaminase; Validat 100.0 3.6E-26 7.8E-31 230.1 27.5 343 91-476 21-370 (373)
110 PRK03158 histidinol-phosphate 100.0 5.1E-26 1.1E-30 228.2 28.5 323 97-473 30-358 (359)
111 PRK02731 histidinol-phosphate 100.0 1E-25 2.2E-30 226.8 30.2 331 94-476 30-366 (367)
112 PRK07681 aspartate aminotransf 99.9 1.8E-25 3.9E-30 227.3 31.3 339 95-472 31-384 (399)
113 PRK15481 transcriptional regul 99.9 2.6E-25 5.5E-30 228.4 32.2 351 80-476 59-431 (431)
114 PRK05937 8-amino-7-oxononanoat 99.9 3.2E-25 7E-30 223.0 31.3 322 96-476 4-350 (370)
115 PRK07366 succinyldiaminopimela 99.9 2.6E-25 5.6E-30 225.4 30.3 344 94-474 28-388 (388)
116 PLN02483 serine palmitoyltrans 99.9 1.1E-24 2.4E-29 225.5 35.0 333 92-476 96-466 (489)
117 PRK08636 aspartate aminotransf 99.9 7.2E-25 1.6E-29 223.1 33.2 354 94-476 31-400 (403)
118 cd06454 KBL_like KBL_like; thi 99.9 5.1E-25 1.1E-29 220.0 31.1 328 96-473 1-348 (349)
119 PRK14809 histidinol-phosphate 99.9 3.7E-25 8.1E-30 221.7 29.6 325 94-475 28-356 (357)
120 PRK08960 hypothetical protein; 99.9 9.1E-25 2E-29 221.3 32.4 341 95-475 31-386 (387)
121 PRK01533 histidinol-phosphate 99.9 1.6E-25 3.5E-30 224.5 25.9 323 95-475 28-354 (366)
122 TIGR03537 DapC succinyldiamino 99.9 8.6E-25 1.9E-29 218.5 30.3 337 97-472 1-349 (350)
123 PRK09147 succinyldiaminopimela 99.9 1.3E-24 2.7E-29 220.9 31.8 341 94-475 27-395 (396)
124 PRK09148 aminotransferase; Val 99.9 9.1E-25 2E-29 222.3 30.7 347 94-476 28-390 (405)
125 PRK08153 histidinol-phosphate 99.9 4.8E-25 1E-29 221.7 28.0 326 97-476 33-365 (369)
126 PRK05764 aspartate aminotransf 99.9 1.1E-24 2.4E-29 221.2 30.8 348 95-476 30-391 (393)
127 COG0079 HisC Histidinol-phosph 99.9 9E-25 2E-29 215.8 29.1 324 97-476 23-354 (356)
128 PRK06290 aspartate aminotransf 99.9 1.7E-24 3.7E-29 220.1 31.6 350 94-477 42-406 (410)
129 PRK08068 transaminase; Reviewe 99.9 1.9E-24 4.1E-29 219.1 31.1 336 95-473 31-386 (389)
130 PRK08361 aspartate aminotransf 99.9 9.5E-25 2.1E-29 221.5 28.7 346 96-477 33-391 (391)
131 COG1167 ARO8 Transcriptional r 99.9 1.8E-24 3.9E-29 222.1 30.6 348 93-476 86-455 (459)
132 PRK12414 putative aminotransfe 99.9 2.6E-24 5.6E-29 217.7 31.3 336 97-472 30-383 (384)
133 PRK06348 aspartate aminotransf 99.9 2.7E-24 5.9E-29 217.6 31.3 336 97-473 30-382 (384)
134 TIGR01264 tyr_amTase_E tyrosin 99.9 2.2E-24 4.8E-29 219.5 30.9 349 95-477 30-400 (401)
135 PTZ00433 tyrosine aminotransfe 99.9 4.1E-24 9E-29 218.1 32.8 356 89-476 26-408 (412)
136 PRK06358 threonine-phosphate d 99.9 3.2E-24 7E-29 214.5 31.2 324 96-474 19-353 (354)
137 cd00613 GDC-P Glycine cleavage 99.9 1.5E-24 3.3E-29 220.6 28.9 330 103-470 23-398 (398)
138 TIGR03540 DapC_direct LL-diami 99.9 3.4E-24 7.4E-29 216.9 31.2 338 95-472 28-382 (383)
139 PLN02187 rooty/superroot1 99.9 4.6E-24 1E-28 219.8 32.5 355 93-476 63-438 (462)
140 PRK05942 aspartate aminotransf 99.9 4E-24 8.6E-29 217.1 31.5 337 95-473 34-389 (394)
141 PRK02610 histidinol-phosphate 99.9 3.4E-24 7.4E-29 216.0 30.1 336 96-477 28-372 (374)
142 TIGR01141 hisC histidinol-phos 99.9 2E-24 4.3E-29 215.6 27.8 320 96-471 19-346 (346)
143 PRK06107 aspartate aminotransf 99.9 6.7E-24 1.5E-28 215.9 32.1 352 95-477 32-401 (402)
144 PRK05957 aspartate aminotransf 99.9 7.2E-24 1.6E-28 214.7 32.2 337 98-476 29-385 (389)
145 PRK09276 LL-diaminopimelate am 99.9 3.9E-24 8.5E-29 216.6 30.0 338 95-472 30-384 (385)
146 PLN00143 tyrosine/nicotianamin 99.9 1.2E-23 2.5E-28 214.4 32.9 352 91-476 27-404 (409)
147 COG1168 MalY Bifunctional PLP- 99.9 5.2E-24 1.1E-28 202.1 28.0 328 113-476 39-386 (388)
148 PRK09082 methionine aminotrans 99.9 2.6E-24 5.7E-29 217.8 28.0 339 96-472 30-385 (386)
149 PRK00950 histidinol-phosphate 99.9 3.2E-24 6.8E-29 215.4 28.3 323 93-474 31-360 (361)
150 PLN00145 tyrosine/nicotianamin 99.9 1.7E-23 3.7E-28 214.1 33.9 351 95-476 51-424 (430)
151 PRK08912 hypothetical protein; 99.9 6.7E-24 1.5E-28 215.0 30.6 342 97-476 27-386 (387)
152 PRK08056 threonine-phosphate d 99.9 5.6E-24 1.2E-28 213.0 29.7 328 92-475 16-354 (356)
153 PRK05839 hypothetical protein; 99.9 4.5E-24 9.9E-29 215.0 28.8 332 94-475 22-373 (374)
154 PRK07865 N-succinyldiaminopime 99.9 7.8E-24 1.7E-28 212.7 30.0 323 95-471 26-363 (364)
155 PLN02656 tyrosine transaminase 99.9 2.5E-23 5.5E-28 212.0 34.0 353 94-476 29-403 (409)
156 PRK13355 bifunctional HTH-doma 99.9 8.4E-24 1.8E-28 221.5 31.1 350 93-476 143-514 (517)
157 PRK07777 aminotransferase; Val 99.9 1.1E-23 2.4E-28 213.4 30.6 340 97-475 25-385 (387)
158 PRK08363 alanine aminotransfer 99.9 1.8E-23 3.8E-28 212.7 32.1 348 94-476 28-394 (398)
159 PRK07550 hypothetical protein; 99.9 1.3E-23 2.7E-28 212.9 30.8 341 94-473 27-384 (386)
160 PLN03026 histidinol-phosphate 99.9 8.8E-24 1.9E-28 213.2 29.1 325 94-473 50-379 (380)
161 TIGR03539 DapC_actino succinyl 99.9 7E-24 1.5E-28 212.4 28.2 323 94-470 19-356 (357)
162 PRK07309 aromatic amino acid a 99.9 2.6E-23 5.7E-28 210.8 32.6 344 96-476 30-388 (391)
163 PRK07683 aminotransferase A; V 99.9 2.9E-23 6.3E-28 210.2 32.6 338 96-476 28-383 (387)
164 PRK08175 aminotransferase; Val 99.9 2.1E-23 4.6E-28 211.8 31.2 346 95-476 28-389 (395)
165 TIGR03538 DapC_gpp succinyldia 99.9 2.6E-23 5.7E-28 211.0 31.5 335 92-473 24-392 (393)
166 PRK07568 aspartate aminotransf 99.9 2.6E-23 5.6E-28 211.5 31.1 337 96-476 30-392 (397)
167 PRK06855 aminotransferase; Val 99.9 4.5E-23 9.8E-28 211.4 32.3 357 95-476 31-429 (433)
168 PRK14807 histidinol-phosphate 99.9 5.8E-23 1.3E-27 205.3 31.5 322 98-474 24-350 (351)
169 PRK09105 putative aminotransfe 99.9 3.7E-23 8E-28 207.9 29.5 321 97-475 44-369 (370)
170 COG1104 NifS Cysteine sulfinat 99.9 9E-24 2E-28 204.6 23.9 334 97-476 3-377 (386)
171 cd00609 AAT_like Aspartate ami 99.9 3E-23 6.6E-28 206.8 28.3 325 106-471 6-349 (350)
172 PRK05664 threonine-phosphate d 99.9 4.9E-23 1.1E-27 203.9 29.4 307 96-476 20-328 (330)
173 PRK07337 aminotransferase; Val 99.9 8.9E-23 1.9E-27 206.9 31.2 340 96-474 30-387 (388)
174 TIGR01265 tyr_nico_aTase tyros 99.9 1.1E-22 2.5E-27 207.0 31.3 350 94-476 29-401 (403)
175 PRK04870 histidinol-phosphate 99.9 6.2E-23 1.4E-27 205.6 28.9 325 95-474 25-356 (356)
176 PRK05387 histidinol-phosphate 99.9 7.8E-23 1.7E-27 204.7 29.5 325 95-476 23-353 (353)
177 PTZ00377 alanine aminotransfer 99.9 2.1E-22 4.6E-27 209.2 32.5 340 114-476 90-475 (481)
178 PRK07392 threonine-phosphate d 99.9 2.1E-22 4.6E-27 202.0 30.9 327 96-475 22-358 (360)
179 TIGR01140 L_thr_O3P_dcar L-thr 99.9 5.1E-23 1.1E-27 203.9 26.0 278 135-470 44-329 (330)
180 PRK03321 putative aminotransfe 99.9 6.1E-23 1.3E-27 205.4 26.6 323 97-476 23-351 (352)
181 PF00155 Aminotran_1_2: Aminot 99.9 1E-22 2.2E-27 204.6 28.3 341 97-470 2-363 (363)
182 PRK07590 L,L-diaminopimelate a 99.9 9.3E-23 2E-27 208.0 28.4 343 95-474 33-409 (409)
183 PRK14808 histidinol-phosphate 99.9 1.2E-22 2.7E-27 201.4 28.3 321 84-472 7-333 (335)
184 TIGR03392 FeS_syn_CsdA cystein 99.9 6.3E-22 1.4E-26 201.4 34.0 333 95-476 16-395 (398)
185 PRK06959 putative threonine-ph 99.9 1.1E-22 2.3E-27 202.1 27.4 307 96-476 24-333 (339)
186 PRK05166 histidinol-phosphate 99.9 1.6E-22 3.4E-27 203.8 28.7 328 95-475 35-370 (371)
187 PRK06425 histidinol-phosphate 99.9 7.4E-23 1.6E-27 202.9 25.3 283 134-474 36-331 (332)
188 PRK13520 L-tyrosine decarboxyl 99.9 5.4E-22 1.2E-26 199.9 31.7 318 112-476 31-371 (371)
189 PRK09265 aminotransferase AlaT 99.9 6.7E-22 1.4E-26 201.5 32.5 343 94-476 31-401 (404)
190 TIGR03576 pyridox_MJ0158 pyrid 99.9 1.9E-22 4.2E-27 199.9 27.7 303 113-475 34-346 (346)
191 PLN02721 threonine aldolase 99.9 4.1E-22 8.9E-27 199.4 30.3 334 97-476 6-352 (353)
192 PRK10874 cysteine sulfinate de 99.9 1.5E-21 3.3E-26 198.7 34.9 333 95-476 19-398 (401)
193 KOG1359 Glycine C-acetyltransf 99.9 4E-22 8.7E-27 181.5 26.1 341 76-475 46-411 (417)
194 KOG0259 Tyrosine aminotransfer 99.9 8.1E-22 1.8E-26 185.8 28.8 344 96-476 61-433 (447)
195 PLN02376 1-aminocyclopropane-1 99.9 6.9E-22 1.5E-26 204.8 31.2 316 137-475 97-437 (496)
196 PLN02672 methionine S-methyltr 99.9 7.1E-22 1.5E-26 215.1 32.0 356 89-475 690-1079(1082)
197 TIGR03542 DAPAT_plant LL-diami 99.9 2.6E-22 5.7E-27 204.2 26.7 341 95-474 32-402 (402)
198 TIGR03402 FeS_nifS cysteine de 99.9 6.3E-22 1.4E-26 200.1 29.2 328 98-476 2-372 (379)
199 PRK06836 aspartate aminotransf 99.9 1E-21 2.3E-26 199.3 30.7 334 96-476 33-391 (394)
200 KOG0257 Kynurenine aminotransf 99.9 1.5E-22 3.2E-27 194.2 22.2 336 113-472 45-415 (420)
201 PLN02450 1-aminocyclopropane-1 99.9 2.8E-21 6E-26 199.6 32.9 315 138-476 90-430 (468)
202 PRK09440 avtA valine--pyruvate 99.9 7.8E-22 1.7E-26 201.8 27.6 347 97-476 31-411 (416)
203 PRK03967 histidinol-phosphate 99.9 1E-21 2.3E-26 195.0 27.2 314 94-475 16-333 (337)
204 PRK09295 bifunctional cysteine 99.9 1.1E-20 2.3E-25 192.8 35.0 332 95-475 23-403 (406)
205 PRK08354 putative aminotransfe 99.9 4.9E-21 1.1E-25 188.1 30.5 302 93-473 5-309 (311)
206 PRK07908 hypothetical protein; 99.9 4.8E-21 1E-25 191.4 30.8 314 95-475 21-346 (349)
207 PRK09257 aromatic amino acid a 99.9 1.1E-21 2.4E-26 199.4 26.3 340 97-474 27-396 (396)
208 PRK04781 histidinol-phosphate 99.9 8.7E-22 1.9E-26 197.6 24.9 297 135-475 56-362 (364)
209 PLN02607 1-aminocyclopropane-1 99.9 4.7E-21 1E-25 196.4 30.6 312 137-476 98-437 (447)
210 PLN02231 alanine transaminase 99.9 4.3E-21 9.3E-26 200.0 30.7 336 114-476 142-527 (534)
211 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 5E-21 1.1E-25 191.6 30.2 320 113-474 10-355 (355)
212 cd06453 SufS_like Cysteine des 99.9 1.7E-20 3.8E-25 189.2 32.7 318 110-470 8-373 (373)
213 PTZ00376 aspartate aminotransf 99.9 2.3E-21 4.9E-26 197.4 26.3 337 96-475 29-402 (404)
214 TIGR01976 am_tr_V_VC1184 cyste 99.9 1.3E-20 2.9E-25 191.6 31.4 325 96-470 18-397 (397)
215 cd06451 AGAT_like Alanine-glyo 99.9 5.8E-21 1.3E-25 191.4 27.3 317 113-475 10-356 (356)
216 PRK01688 histidinol-phosphate 99.9 9.6E-22 2.1E-26 196.4 20.9 288 133-471 52-351 (351)
217 cd06502 TA_like Low-specificit 99.9 6.7E-21 1.5E-25 189.5 26.5 322 100-472 1-337 (338)
218 PRK02948 cysteine desulfurase; 99.9 6.5E-21 1.4E-25 192.8 26.6 330 97-476 2-374 (381)
219 TIGR02326 transamin_PhnW 2-ami 99.9 1.6E-20 3.5E-25 188.6 28.9 319 113-475 14-361 (363)
220 PRK09275 aspartate aminotransf 99.9 2.2E-21 4.7E-26 199.7 22.8 345 98-476 102-517 (527)
221 KOG1360 5-aminolevulinate synt 99.9 1.5E-20 3.3E-25 177.7 25.6 316 113-476 186-524 (570)
222 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 1.4E-20 2.9E-25 189.5 27.1 304 137-476 50-368 (370)
223 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 3.3E-20 7.2E-25 187.7 29.7 337 108-476 27-381 (387)
224 COG0520 csdA Selenocysteine ly 99.9 8.8E-20 1.9E-24 183.3 31.8 332 96-475 23-404 (405)
225 PRK08637 hypothetical protein; 99.9 5E-20 1.1E-24 186.6 29.6 305 137-477 47-387 (388)
226 TIGR01979 sufS cysteine desulf 99.9 2.7E-19 5.9E-24 182.4 34.5 332 97-477 20-402 (403)
227 TIGR03403 nifS_epsilon cystein 99.9 9.7E-20 2.1E-24 184.3 30.1 327 98-476 2-375 (382)
228 TIGR03801 asp_4_decarbox aspar 99.9 1.1E-20 2.5E-25 194.1 23.2 339 110-476 104-516 (521)
229 PLN02855 Bifunctional selenocy 99.9 2.1E-19 4.5E-24 184.3 31.4 336 95-476 32-418 (424)
230 TIGR02006 IscS cysteine desulf 99.9 2.7E-19 5.9E-24 182.1 31.9 329 96-476 4-377 (402)
231 PRK10534 L-threonine aldolase; 99.9 5.6E-20 1.2E-24 182.6 26.1 321 98-475 1-332 (333)
232 PLN02409 serine--glyoxylate am 99.9 8.5E-20 1.8E-24 185.5 27.5 322 113-476 20-372 (401)
233 PRK04635 histidinol-phosphate 99.9 2.8E-20 6E-25 186.2 22.1 288 134-473 56-352 (354)
234 TIGR01814 kynureninase kynuren 99.9 2.9E-19 6.3E-24 182.1 29.8 336 94-474 26-405 (406)
235 PF00266 Aminotran_5: Aminotra 99.9 4.4E-19 9.6E-24 178.7 30.6 320 98-466 2-371 (371)
236 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 2.4E-19 5.2E-24 180.0 27.2 330 110-474 10-360 (361)
237 PLN02397 aspartate transaminas 99.9 3E-19 6.5E-24 182.5 27.6 275 161-475 122-420 (423)
238 PRK13479 2-aminoethylphosphona 99.9 6.1E-19 1.3E-23 177.6 28.8 321 113-477 16-364 (368)
239 TIGR03812 tyr_de_CO2_Arch tyro 99.9 2.3E-18 4.9E-23 173.7 33.0 317 113-472 32-372 (373)
240 PLN02651 cysteine desulfurase 99.8 1.7E-19 3.7E-24 181.2 24.1 319 98-464 2-364 (364)
241 PRK13238 tnaA tryptophanase/L- 99.8 2E-18 4.3E-23 177.1 30.3 340 95-475 44-432 (460)
242 PLN02368 alanine transaminase 99.8 2.9E-19 6.3E-24 180.9 23.3 249 137-410 110-392 (407)
243 TIGR01977 am_tr_V_EF2568 cyste 99.8 5.1E-18 1.1E-22 171.4 30.2 319 113-472 12-375 (376)
244 PRK14012 cysteine desulfurase; 99.8 4.4E-18 9.5E-23 173.4 27.7 327 96-476 4-379 (404)
245 cd00378 SHMT Serine-glycine hy 99.8 7E-18 1.5E-22 171.9 28.4 333 96-475 19-384 (402)
246 KOG0256 1-aminocyclopropane-1- 99.8 2.1E-17 4.5E-22 157.6 28.8 318 112-475 121-460 (471)
247 COG2008 GLY1 Threonine aldolas 99.8 1.5E-17 3.3E-22 158.0 25.8 333 99-474 2-341 (342)
248 KOG1368 Threonine aldolase [Am 99.8 8.6E-18 1.9E-22 153.8 21.3 330 97-473 22-365 (384)
249 cd06450 DOPA_deC_like DOPA dec 99.8 7.5E-18 1.6E-22 168.1 21.9 286 137-472 37-344 (345)
250 PRK13034 serine hydroxymethylt 99.8 2.2E-16 4.9E-21 160.8 32.3 321 113-475 40-391 (416)
251 PRK00011 glyA serine hydroxyme 99.8 2.1E-16 4.5E-21 161.8 31.9 333 96-475 25-388 (416)
252 TIGR01437 selA_rel uncharacter 99.8 2.3E-16 4.9E-21 158.0 31.1 321 96-474 8-363 (363)
253 cd00614 CGS_like CGS_like: Cys 99.8 2.5E-17 5.3E-22 165.6 23.3 291 132-474 34-368 (369)
254 KOG0634 Aromatic amino acid am 99.8 1.9E-16 4.2E-21 152.3 28.0 296 157-476 126-466 (472)
255 PLN02242 methionine gamma-lyas 99.8 6.2E-17 1.3E-21 164.4 25.1 259 132-434 70-347 (418)
256 cd00616 AHBA_syn 3-amino-5-hyd 99.8 1.5E-16 3.2E-21 159.2 25.9 302 119-471 3-352 (352)
257 cd00617 Tnase_like Tryptophana 99.8 3.6E-16 7.7E-21 158.4 27.4 355 92-476 16-408 (431)
258 COG0075 Serine-pyruvate aminot 99.8 6.7E-16 1.5E-20 151.2 27.9 322 114-477 17-364 (383)
259 TIGR03235 DNA_S_dndA cysteine 99.7 1.4E-16 3.1E-21 159.5 22.0 290 111-443 8-321 (353)
260 PRK00451 glycine dehydrogenase 99.7 8.6E-16 1.9E-20 158.7 28.0 285 140-474 114-446 (447)
261 PRK07049 methionine gamma-lyas 99.7 7.6E-16 1.6E-20 157.0 26.1 223 132-390 77-310 (427)
262 KOG1549 Cysteine desulfurase N 99.7 4.3E-16 9.2E-21 151.9 22.6 337 96-476 44-418 (428)
263 PTZ00094 serine hydroxymethylt 99.7 1.8E-15 3.9E-20 156.0 28.7 329 113-475 46-407 (452)
264 PRK06767 methionine gamma-lyas 99.7 4.7E-16 1E-20 157.1 23.9 289 132-476 55-385 (386)
265 TIGR01325 O_suc_HS_sulf O-succ 99.7 4.3E-16 9.3E-21 157.0 22.2 241 132-413 48-306 (380)
266 PRK06460 hypothetical protein; 99.7 2.2E-15 4.7E-20 151.5 24.4 295 130-476 37-374 (376)
267 PRK07582 cystathionine gamma-l 99.7 3.4E-15 7.3E-20 149.7 25.2 280 132-471 45-364 (366)
268 PRK08133 O-succinylhomoserine 99.7 1.8E-15 3.9E-20 152.9 23.2 288 132-475 55-389 (390)
269 PRK08247 cystathionine gamma-s 99.7 4.7E-15 1E-19 148.8 26.0 239 130-412 44-287 (366)
270 PRK08249 cystathionine gamma-s 99.7 5.9E-15 1.3E-19 149.2 26.6 239 130-413 56-316 (398)
271 PRK06234 methionine gamma-lyas 99.7 4.4E-15 9.6E-20 150.5 25.5 256 130-437 56-337 (400)
272 PRK08045 cystathionine gamma-s 99.7 1E-14 2.2E-19 146.9 27.6 239 130-413 44-305 (386)
273 PRK07810 O-succinylhomoserine 99.7 4E-15 8.8E-20 150.6 24.7 237 132-413 64-323 (403)
274 PRK07050 cystathionine beta-ly 99.7 6.1E-15 1.3E-19 149.0 25.8 294 130-473 57-392 (394)
275 TIGR01328 met_gam_lyase methio 99.7 6.1E-15 1.3E-19 149.0 25.2 296 130-477 51-391 (391)
276 TIGR02080 O_succ_thio_ly O-suc 99.7 7.7E-15 1.7E-19 147.7 25.6 289 132-476 45-381 (382)
277 PRK04366 glycine dehydrogenase 99.7 1.8E-14 3.8E-19 149.4 28.5 324 112-476 81-448 (481)
278 TIGR02379 ECA_wecE TDP-4-keto- 99.7 2.1E-14 4.5E-19 144.3 27.8 309 115-474 11-375 (376)
279 TIGR01324 cysta_beta_ly_B cyst 99.7 3.1E-15 6.8E-20 150.0 21.6 293 133-476 45-376 (377)
280 PRK07504 O-succinylhomoserine 99.7 7.8E-15 1.7E-19 148.5 24.7 243 130-413 57-318 (398)
281 PRK03080 phosphoserine aminotr 99.7 1.1E-14 2.4E-19 146.9 25.6 314 114-476 24-373 (378)
282 COG3977 Alanine-alpha-ketoisov 99.7 3E-14 6.5E-19 130.9 25.3 305 136-476 76-411 (417)
283 PRK05968 hypothetical protein; 99.7 1.2E-14 2.6E-19 146.9 24.7 289 131-473 56-387 (389)
284 PRK07269 cystathionine gamma-s 99.7 2.8E-14 6.1E-19 142.5 26.3 236 130-413 46-288 (364)
285 PRK13580 serine hydroxymethylt 99.7 7.7E-14 1.7E-18 141.3 29.4 217 237-475 209-444 (493)
286 KOG1358 Serine palmitoyltransf 99.7 4.7E-15 1E-19 140.8 19.0 350 82-476 81-465 (467)
287 PRK07503 methionine gamma-lyas 99.7 5E-14 1.1E-18 142.9 27.4 220 130-390 57-282 (403)
288 PRK02769 histidine decarboxyla 99.7 1.2E-13 2.5E-18 138.5 29.3 287 138-475 65-371 (380)
289 PRK08776 cystathionine gamma-s 99.7 6E-14 1.3E-18 142.1 27.4 238 131-413 53-313 (405)
290 PRK08861 cystathionine gamma-s 99.7 4.4E-14 9.4E-19 142.0 26.2 239 130-413 45-306 (388)
291 TIGR01326 OAH_OAS_sulfhy OAH/O 99.7 6.4E-15 1.4E-19 150.2 19.8 166 132-336 51-219 (418)
292 PRK07811 cystathionine gamma-s 99.6 8.4E-14 1.8E-18 140.6 27.1 288 132-475 55-387 (388)
293 PRK08574 cystathionine gamma-s 99.6 4.8E-14 1E-18 142.1 24.9 217 132-390 47-268 (385)
294 KOG1357 Serine palmitoyltransf 99.6 1.5E-14 3.2E-19 139.8 19.9 309 112-473 155-499 (519)
295 TIGR01788 Glu-decarb-GAD gluta 99.6 1.4E-13 2.9E-18 139.9 28.1 330 113-477 53-430 (431)
296 PRK05355 3-phosphoserine/phosp 99.6 5.4E-14 1.2E-18 140.5 24.2 310 113-476 14-358 (360)
297 PRK09028 cystathionine beta-ly 99.6 1.2E-13 2.6E-18 138.7 26.6 236 133-413 56-313 (394)
298 TIGR01364 serC_1 phosphoserine 99.6 1.1E-13 2.4E-18 137.5 26.0 312 113-476 3-348 (349)
299 PRK06084 O-acetylhomoserine am 99.6 1.2E-13 2.7E-18 140.6 26.8 167 130-335 50-219 (425)
300 PLN02414 glycine dehydrogenase 99.6 2E-13 4.3E-18 149.3 29.4 302 138-476 568-907 (993)
301 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.6 2.2E-13 4.7E-18 137.4 27.5 308 115-474 11-374 (375)
302 PLN03032 serine decarboxylase; 99.6 3.2E-13 7E-18 134.4 27.9 286 137-472 65-372 (374)
303 PLN03226 serine hydroxymethylt 99.6 2.2E-13 4.7E-18 140.3 27.0 324 112-475 45-418 (475)
304 TIGR01329 cysta_beta_ly_E cyst 99.6 2.1E-13 4.6E-18 137.2 25.8 285 134-476 43-375 (378)
305 PLN02724 Molybdenum cofactor s 99.6 3.7E-13 8E-18 147.7 29.7 350 96-474 35-486 (805)
306 PRK11658 UDP-4-amino-4-deoxy-L 99.6 2.6E-13 5.5E-18 137.0 25.7 308 115-475 14-378 (379)
307 TIGR01366 serC_3 phosphoserine 99.6 6.2E-14 1.3E-18 140.3 20.9 313 113-477 14-361 (361)
308 PRK15407 lipopolysaccharide bi 99.6 1.1E-12 2.4E-17 134.2 28.9 310 117-475 46-435 (438)
309 PRK05994 O-acetylhomoserine am 99.6 5.5E-13 1.2E-17 136.2 26.6 163 133-334 58-223 (427)
310 KOG0633 Histidinol phosphate a 99.6 2.3E-13 5E-18 122.7 20.4 297 136-474 67-375 (375)
311 PRK05967 cystathionine beta-ly 99.6 4.6E-13 1E-17 134.3 24.7 237 132-413 58-316 (395)
312 PRK08064 cystathionine beta-ly 99.6 2.7E-13 5.9E-18 137.0 22.8 288 133-473 49-383 (390)
313 PRK06176 cystathionine gamma-s 99.6 1.7E-13 3.8E-18 137.8 21.1 174 131-344 43-221 (380)
314 TIGR03588 PseC UDP-4-keto-6-de 99.6 2.6E-12 5.7E-17 129.9 29.7 313 115-474 10-380 (380)
315 PRK08248 O-acetylhomoserine am 99.6 8.5E-13 1.9E-17 134.6 26.0 164 132-334 58-224 (431)
316 PRK05939 hypothetical protein; 99.6 9.1E-13 2E-17 133.2 24.9 166 130-335 39-207 (397)
317 PLN02509 cystathionine beta-ly 99.6 1.9E-12 4.1E-17 132.4 25.9 215 134-390 129-348 (464)
318 TIGR03531 selenium_SpcS O-phos 99.5 2.2E-12 4.8E-17 130.6 26.0 306 138-474 105-444 (444)
319 PF01053 Cys_Met_Meta_PP: Cys/ 99.5 1.2E-12 2.6E-17 130.9 23.9 290 130-475 47-386 (386)
320 PRK07671 cystathionine beta-ly 99.5 1.2E-12 2.6E-17 131.7 24.0 217 132-390 44-265 (377)
321 cd01494 AAT_I Aspartate aminot 99.5 2.1E-13 4.5E-18 121.0 16.6 167 140-335 2-170 (170)
322 cd00611 PSAT_like Phosphoserin 99.5 2E-12 4.3E-17 129.3 23.4 315 113-474 10-354 (355)
323 KOG2862 Alanine-glyoxylate ami 99.5 6.8E-12 1.5E-16 116.2 24.6 315 107-476 38-382 (385)
324 PRK08114 cystathionine beta-ly 99.5 4.2E-12 9E-17 127.3 25.3 239 130-413 54-316 (395)
325 PRK06702 O-acetylhomoserine am 99.5 5.2E-12 1.1E-16 128.0 26.2 260 113-413 37-347 (432)
326 PRK05367 glycine dehydrogenase 99.5 6.7E-12 1.4E-16 138.0 29.0 303 138-476 542-875 (954)
327 PRK08134 O-acetylhomoserine am 99.5 5.8E-12 1.2E-16 128.5 26.2 166 130-334 56-224 (433)
328 TIGR00461 gcvP glycine dehydro 99.5 1.8E-11 4E-16 132.5 31.0 300 138-475 530-866 (939)
329 PLN02880 tyrosine decarboxylas 99.5 5.5E-12 1.2E-16 130.6 25.4 318 137-476 121-484 (490)
330 PRK07812 O-acetylhomoserine am 99.5 5.9E-12 1.3E-16 128.3 25.0 164 133-334 64-230 (436)
331 TIGR02618 tyr_phenol_ly tyrosi 99.5 1.7E-11 3.8E-16 122.6 27.1 346 94-475 36-425 (450)
332 PRK04311 selenocysteine syntha 99.5 1.5E-11 3.3E-16 125.8 26.5 338 90-475 81-463 (464)
333 PLN02590 probable tyrosine dec 99.5 4.1E-10 8.9E-15 116.9 36.0 317 138-476 170-532 (539)
334 PRK13237 tyrosine phenol-lyase 99.5 6.7E-11 1.4E-15 118.8 28.7 347 94-475 43-432 (460)
335 PRK12566 glycine dehydrogenase 99.5 3.7E-11 8E-16 129.4 28.4 298 139-476 544-876 (954)
336 PF01041 DegT_DnrJ_EryC1: DegT 99.5 8.5E-12 1.8E-16 125.3 21.5 306 115-471 5-363 (363)
337 COG0399 WecE Predicted pyridox 99.4 5E-11 1.1E-15 117.3 25.6 312 115-476 15-373 (374)
338 PRK06434 cystathionine gamma-l 99.4 3.3E-11 7.2E-16 120.8 23.0 284 132-475 58-383 (384)
339 TIGR00474 selA seryl-tRNA(sec) 99.4 6.8E-11 1.5E-15 120.8 25.6 332 90-470 76-453 (454)
340 PRK05613 O-acetylhomoserine am 99.4 5.3E-11 1.1E-15 121.4 23.9 165 132-334 63-230 (437)
341 cd00615 Orn_deC_like Ornithine 99.4 2.4E-12 5.1E-17 125.5 13.4 227 136-389 57-293 (294)
342 COG2873 MET17 O-acetylhomoseri 99.4 2.5E-11 5.5E-16 115.4 18.4 189 110-340 35-228 (426)
343 PLN02263 serine decarboxylase 99.4 9.3E-10 2E-14 111.6 30.8 288 138-475 133-442 (470)
344 COG1103 Archaea-specific pyrid 99.4 9E-10 1.9E-14 100.4 27.2 327 113-476 29-380 (382)
345 TIGR03799 NOD_PanD_pyr putativ 99.4 2.7E-10 5.9E-15 118.3 27.2 309 137-469 128-518 (522)
346 PLN02452 phosphoserine transam 99.3 7.6E-10 1.6E-14 110.3 25.1 326 98-476 8-363 (365)
347 TIGR01365 serC_2 phosphoserine 99.3 1.2E-09 2.6E-14 108.9 25.8 317 114-476 15-373 (374)
348 KOG0258 Alanine aminotransfera 99.3 8.2E-10 1.8E-14 105.5 23.0 327 114-473 88-466 (475)
349 COG3844 Kynureninase [Amino ac 99.3 7.6E-09 1.6E-13 96.9 27.4 335 90-476 26-402 (407)
350 COG0626 MetC Cystathionine bet 99.3 3E-09 6.4E-14 105.5 25.6 291 130-476 55-394 (396)
351 PF01212 Beta_elim_lyase: Beta 99.3 5.3E-12 1.1E-16 121.6 5.8 201 113-341 7-214 (290)
352 TIGR02617 tnaA_trp_ase tryptop 99.2 8.7E-09 1.9E-13 102.5 25.9 349 96-475 41-440 (467)
353 COG1448 TyrB Aspartate/tyrosin 99.2 2.7E-09 5.8E-14 102.5 20.7 299 138-474 69-396 (396)
354 PF12897 Aminotran_MocR: Alani 99.2 7.1E-09 1.5E-13 99.9 21.7 303 137-474 68-413 (425)
355 PLN02271 serine hydroxymethylt 99.2 4.1E-08 8.9E-13 100.6 28.6 281 162-475 221-539 (586)
356 PRK12462 phosphoserine aminotr 99.2 2.3E-08 4.9E-13 98.9 26.0 320 100-475 7-361 (364)
357 KOG0053 Cystathionine beta-lya 99.2 5.6E-09 1.2E-13 102.3 21.0 195 133-366 72-271 (409)
358 PLN02414 glycine dehydrogenase 99.1 2.8E-08 6.1E-13 109.4 28.4 302 113-471 117-464 (993)
359 PRK05367 glycine dehydrogenase 99.0 7.4E-08 1.6E-12 106.5 26.5 275 140-471 123-437 (954)
360 COG0112 GlyA Glycine/serine hy 99.0 2.5E-07 5.4E-12 89.5 26.2 324 112-475 37-389 (413)
361 COG0076 GadB Glutamate decarbo 99.0 8.3E-08 1.8E-12 98.2 24.2 252 113-391 74-361 (460)
362 COG1003 GcvP Glycine cleavage 99.0 2.3E-07 4.9E-12 90.5 23.9 297 137-476 108-447 (496)
363 PF00282 Pyridoxal_deC: Pyrido 98.9 8E-07 1.7E-11 89.2 23.9 229 139-390 80-353 (373)
364 PRK15029 arginine decarboxylas 98.9 1E-06 2.2E-11 94.7 25.8 311 139-473 206-601 (755)
365 PF00464 SHMT: Serine hydroxym 98.8 2.3E-07 4.9E-12 92.6 18.1 273 161-468 92-397 (399)
366 PF01276 OKR_DC_1: Orn/Lys/Arg 98.8 5.8E-07 1.3E-11 90.1 18.9 232 137-391 65-317 (417)
367 COG3033 TnaA Tryptophanase [Am 98.7 5.4E-06 1.2E-10 79.1 23.5 354 94-475 44-443 (471)
368 COG0403 GcvP Glycine cleavage 98.6 4.2E-05 9.2E-10 75.0 26.9 284 141-474 123-448 (450)
369 TIGR00461 gcvP glycine dehydro 98.6 2.1E-05 4.6E-10 86.1 27.3 277 140-471 111-426 (939)
370 PRK13578 ornithine decarboxyla 98.5 1.3E-05 2.8E-10 85.6 22.1 310 139-473 175-562 (720)
371 PF02347 GDC-P: Glycine cleava 98.5 3E-05 6.5E-10 77.9 22.8 275 139-470 111-429 (429)
372 COG1921 SelA Selenocysteine sy 98.5 1.2E-05 2.5E-10 79.0 19.0 223 114-370 40-271 (395)
373 PRK15399 lysine decarboxylase 98.5 4.1E-05 8.9E-10 81.7 24.4 308 139-473 196-556 (713)
374 KOG0629 Glutamate decarboxylas 98.5 1.2E-05 2.7E-10 78.3 18.2 311 141-476 144-509 (510)
375 PF03841 SelA: L-seryl-tRNA se 98.5 3.6E-07 7.8E-12 88.7 7.3 224 108-369 11-260 (367)
376 TIGR03811 tyr_de_CO2_Ent tyros 98.5 6.6E-05 1.4E-09 79.3 24.5 151 237-391 262-475 (608)
377 PF04864 Alliinase_C: Allinase 98.4 3.8E-05 8.2E-10 73.6 19.6 281 137-472 45-361 (363)
378 COG1932 SerC Phosphoserine ami 98.4 0.00027 5.9E-09 68.2 25.5 198 252-476 145-363 (365)
379 PRK15400 lysine decarboxylase 98.4 8.3E-05 1.8E-09 79.4 23.2 305 139-473 196-556 (714)
380 KOG3846 L-kynurenine hydrolase 98.2 0.00023 5.1E-09 66.7 20.1 330 108-476 74-461 (465)
381 PF05889 SLA_LP_auto_ag: Solub 98.2 0.00036 7.7E-09 68.7 20.4 226 237-475 141-389 (389)
382 PF06838 Met_gamma_lyase: Meth 98.1 0.00025 5.4E-09 68.6 17.9 210 113-344 25-247 (403)
383 PRK12566 glycine dehydrogenase 98.1 0.0033 7.1E-08 69.0 27.2 271 140-471 126-439 (954)
384 KOG2040 Glycine dehydrogenase 98.0 0.00084 1.8E-08 68.9 20.5 301 138-473 582-915 (1001)
385 COG1982 LdcC Arginine/lysine/o 97.9 0.0012 2.6E-08 68.0 20.1 302 138-471 70-403 (557)
386 KOG1412 Aspartate aminotransfe 97.8 0.0016 3.5E-08 61.4 16.2 193 260-476 187-405 (410)
387 KOG1383 Glutamate decarboxylas 97.6 0.015 3.3E-07 58.0 20.9 322 114-476 93-446 (491)
388 KOG2467 Glycine/serine hydroxy 97.5 0.033 7.2E-07 53.9 20.6 210 238-474 179-424 (477)
389 KOG0628 Aromatic-L-amino-acid/ 97.4 0.014 3E-07 58.2 17.9 221 238-476 220-471 (511)
390 KOG1411 Aspartate aminotransfe 97.0 0.012 2.7E-07 56.3 12.2 215 79-332 52-285 (427)
391 COG4100 Cystathionine beta-lya 96.3 0.099 2.1E-06 49.4 12.9 211 113-344 36-258 (416)
392 PLN02994 1-aminocyclopropane-1 96.2 0.025 5.5E-07 49.1 8.0 73 116-193 77-153 (153)
393 KOG2040 Glycine dehydrogenase 91.9 20 0.00042 38.2 18.7 44 426-471 435-478 (1001)
394 KOG3843 Predicted serine hydro 90.9 2 4.4E-05 40.1 9.4 55 237-295 143-197 (432)
395 KOG1465 Translation initiation 78.2 54 0.0012 31.5 12.3 114 156-301 163-277 (353)
396 KOG2433 Uncharacterized conser 60.8 28 0.0006 34.6 6.7 63 113-178 434-498 (577)
397 cd01522 RHOD_1 Member of the R 60.8 35 0.00077 27.7 6.7 52 145-198 55-106 (117)
398 cd01821 Rhamnogalacturan_acety 55.7 27 0.00057 31.3 5.6 56 234-289 90-150 (198)
399 smart00642 Aamy Alpha-amylase 54.2 32 0.00069 30.2 5.6 47 250-296 31-94 (166)
400 cd01822 Lysophospholipase_L1_l 46.5 32 0.0007 29.8 4.5 55 235-290 85-140 (177)
401 PLN02672 methionine S-methyltr 45.4 1.3E+02 0.0029 34.7 10.0 120 152-293 446-565 (1082)
402 COG0108 RibB 3,4-dihydroxy-2-b 44.5 27 0.00059 31.4 3.5 36 250-290 155-190 (203)
403 COG0296 GlgB 1,4-alpha-glucan 43.1 25 0.00053 37.7 3.6 32 270-301 212-243 (628)
404 COG1105 FruK Fructose-1-phosph 41.0 67 0.0014 31.3 5.9 24 269-292 143-166 (310)
405 PF12138 Spherulin4: Spherulat 40.2 66 0.0014 30.4 5.7 51 238-289 19-71 (253)
406 COG0352 ThiE Thiamine monophos 38.1 62 0.0014 29.7 5.0 93 237-342 24-120 (211)
407 PF13481 AAA_25: AAA domain; P 37.9 45 0.00097 29.6 4.1 52 237-290 129-184 (193)
408 TIGR03573 WbuX N-acetyl sugar 37.7 4.2E+02 0.009 26.3 11.2 52 141-192 46-97 (343)
409 cd00158 RHOD Rhodanese Homolog 37.5 74 0.0016 23.6 4.8 40 153-194 49-88 (89)
410 PRK10886 DnaA initiator-associ 37.4 1.9E+02 0.0042 26.1 8.0 17 274-290 125-141 (196)
411 cd01836 FeeA_FeeB_like SGNH_hy 36.9 2.9E+02 0.0062 24.1 11.0 30 142-171 28-57 (191)
412 COG0648 Nfo Endonuclease IV [D 36.7 1.2E+02 0.0025 29.2 6.7 43 253-295 136-179 (280)
413 PRK08535 translation initiatio 36.4 3.4E+02 0.0075 26.5 10.2 138 115-290 86-227 (310)
414 TIGR00511 ribulose_e2b2 ribose 36.1 3.8E+02 0.0082 26.1 10.4 116 141-290 103-222 (301)
415 cd01834 SGNH_hydrolase_like_2 35.5 76 0.0016 27.7 5.2 56 234-289 85-151 (191)
416 PRK00162 glpE thiosulfate sulf 34.5 78 0.0017 25.1 4.6 51 142-195 47-97 (108)
417 COG2515 Acd 1-aminocyclopropan 34.5 4.5E+02 0.0097 25.6 13.4 31 265-297 255-285 (323)
418 cd01444 GlpE_ST GlpE sulfurtra 34.3 87 0.0019 23.9 4.8 42 151-194 53-94 (96)
419 PLN02160 thiosulfate sulfurtra 34.0 86 0.0019 26.4 4.9 45 151-197 78-122 (136)
420 PF13407 Peripla_BP_4: Peripla 33.9 1.2E+02 0.0026 27.9 6.6 44 234-290 42-85 (257)
421 COG0647 NagD Predicted sugar p 33.4 3.7E+02 0.008 25.7 9.5 56 87-152 9-66 (269)
422 cd01449 TST_Repeat_2 Thiosulfa 33.2 1.2E+02 0.0026 24.2 5.7 53 140-194 63-116 (118)
423 cd01528 RHOD_2 Member of the R 32.9 1.1E+02 0.0024 23.8 5.2 39 154-194 58-96 (101)
424 PRK06371 translation initiatio 32.6 2.1E+02 0.0045 28.2 7.9 38 251-290 215-254 (329)
425 TIGR01305 GMP_reduct_1 guanosi 32.5 3.5E+02 0.0076 26.8 9.3 31 268-301 195-225 (343)
426 cd01535 4RHOD_Repeat_4 Member 32.0 1.2E+02 0.0026 25.8 5.6 58 141-201 37-94 (145)
427 PRK08883 ribulose-phosphate 3- 31.4 4.2E+02 0.0091 24.4 12.2 51 237-291 119-173 (220)
428 cd01828 sialate_O-acetylestera 31.4 77 0.0017 27.3 4.4 56 234-289 68-128 (169)
429 TIGR00524 eIF-2B_rel eIF-2B al 30.6 4.6E+02 0.0099 25.5 9.9 38 251-290 197-236 (303)
430 cd04915 ACT_AK-Ectoine_2 ACT d 30.5 1.1E+02 0.0023 22.0 4.3 48 425-474 17-64 (66)
431 cd00411 Asparaginase Asparagin 30.0 5.4E+02 0.012 25.2 12.7 52 137-189 88-151 (323)
432 cd01523 RHOD_Lact_B Member of 30.0 1.1E+02 0.0024 23.7 4.8 41 151-194 58-98 (100)
433 PF01008 IF-2B: Initiation fac 29.9 2.6E+02 0.0055 26.7 8.1 120 142-291 96-216 (282)
434 PRK08335 translation initiatio 29.5 5.1E+02 0.011 24.8 10.5 116 141-290 97-216 (275)
435 cd01533 4RHOD_Repeat_2 Member 29.0 1.3E+02 0.0027 23.9 5.0 38 156-195 68-106 (109)
436 cd01832 SGNH_hydrolase_like_1 28.1 1.1E+02 0.0024 26.6 5.0 55 234-289 88-149 (185)
437 cd04501 SGNH_hydrolase_like_4 27.3 1.3E+02 0.0028 26.2 5.2 55 235-289 80-142 (183)
438 cd01534 4RHOD_Repeat_3 Member 27.3 1.5E+02 0.0033 22.7 5.1 36 156-194 58-93 (95)
439 COG3964 Predicted amidohydrola 26.9 72 0.0016 30.8 3.5 67 238-318 200-272 (386)
440 TIGR00789 flhB_rel flhB C-term 26.8 55 0.0012 25.0 2.3 22 274-295 29-50 (82)
441 cd01524 RHOD_Pyr_redox Member 26.6 2.2E+02 0.0049 21.4 5.9 48 143-194 41-88 (90)
442 PF07905 PucR: Purine cataboli 26.4 1.1E+02 0.0023 25.3 4.1 44 240-290 61-104 (123)
443 PLN03244 alpha-amylase; Provis 26.2 80 0.0017 34.9 4.1 32 270-301 439-470 (872)
444 COG0742 N6-adenine-specific me 26.0 2.1E+02 0.0046 25.6 6.1 83 92-192 41-125 (187)
445 TIGR03772 anch_rpt_subst ancho 25.7 6.2E+02 0.014 26.5 10.4 43 238-289 407-449 (479)
446 cd01018 ZntC Metal binding pro 25.6 5.7E+02 0.012 24.1 9.7 123 116-290 123-245 (266)
447 TIGR02981 phageshock_pspE phag 25.3 2.2E+02 0.0047 22.5 5.6 50 142-194 45-95 (101)
448 cd00984 DnaB_C DnaB helicase C 24.9 1.9E+02 0.0041 26.6 6.1 41 250-290 122-168 (242)
449 TIGR02402 trehalose_TreZ malto 24.7 1.3E+02 0.0029 31.9 5.5 52 250-301 123-189 (542)
450 COG1453 Predicted oxidoreducta 24.4 4.2E+02 0.0091 26.5 8.2 33 249-285 194-226 (391)
451 PRK05720 mtnA methylthioribose 24.3 6.9E+02 0.015 24.8 10.0 38 251-290 225-264 (344)
452 cd01519 RHOD_HSP67B2 Member of 24.3 1.4E+02 0.003 23.3 4.4 50 142-193 53-103 (106)
453 cd07571 ALP_N-acyl_transferase 24.2 1.9E+02 0.0041 27.4 6.0 53 237-290 25-77 (270)
454 cd01838 Isoamyl_acetate_hydrol 24.1 1.2E+02 0.0026 26.6 4.4 56 234-289 88-160 (199)
455 cd01422 MGS Methylglyoxal synt 23.8 2.4E+02 0.0052 22.9 5.7 46 238-290 60-106 (115)
456 cd01393 recA_like RecA is a b 23.4 2.1E+02 0.0045 26.0 6.0 42 249-290 112-164 (226)
457 COG4799 Acetyl-CoA carboxylase 23.2 1.8E+02 0.0039 30.6 5.9 75 251-326 324-412 (526)
458 COG2265 TrmA SAM-dependent met 23.0 5.9E+02 0.013 26.2 9.6 24 155-178 315-338 (432)
459 PRK10528 multifunctional acyl- 22.8 91 0.002 27.8 3.4 16 274-289 131-146 (191)
460 PRK05772 translation initiatio 22.6 5.7E+02 0.012 25.6 9.1 38 251-290 246-285 (363)
461 COG0821 gcpE 1-hydroxy-2-methy 22.5 7.6E+02 0.017 24.4 10.9 26 267-292 56-81 (361)
462 smart00545 JmjN Small domain f 22.4 1E+02 0.0022 20.2 2.6 21 270-290 15-35 (42)
463 TIGR03865 PQQ_CXXCW PQQ-depend 22.4 2E+02 0.0043 25.0 5.3 52 143-196 103-157 (162)
464 cd01827 sialate_O-acetylestera 22.3 1.4E+02 0.0031 26.0 4.6 53 237-289 92-152 (188)
465 PRK13602 putative ribosomal pr 22.2 3.1E+02 0.0067 20.8 5.7 45 238-293 17-61 (82)
466 cd01527 RHOD_YgaP Member of th 21.8 1.3E+02 0.0029 23.1 3.8 41 152-194 52-92 (99)
467 COG3155 ElbB Uncharacterized p 21.6 39 0.00084 29.2 0.6 42 311-352 112-154 (217)
468 PF02603 Hpr_kinase_N: HPr Ser 21.5 88 0.0019 26.0 2.7 38 239-290 73-110 (127)
469 PF03602 Cons_hypoth95: Conser 21.4 2.9E+02 0.0063 24.6 6.2 84 93-192 41-125 (183)
470 PF00926 DHBP_synthase: 3,4-di 21.1 1.3E+02 0.0028 27.2 3.8 36 250-290 151-186 (194)
471 TIGR00506 ribB 3,4-dihydroxy-2 21.0 1.3E+02 0.0029 27.2 3.9 35 251-290 157-191 (199)
472 PRK14057 epimerase; Provisiona 21.0 7.2E+02 0.016 23.5 10.7 50 237-291 145-199 (254)
473 PF11422 IBP39: Initiator bind 20.8 37 0.00081 29.8 0.4 22 75-98 150-171 (181)
474 PF06153 DUF970: Protein of un 20.8 33 0.00073 27.7 0.1 49 424-475 11-65 (109)
475 PF02082 Rrf2: Transcriptional 20.8 2.6E+02 0.0057 21.0 5.1 41 425-465 41-81 (83)
476 cd01529 4RHOD_Repeats Member o 20.7 2E+02 0.0042 22.0 4.5 41 152-194 54-94 (96)
477 COG2159 Predicted metal-depend 20.7 3.1E+02 0.0066 26.5 6.7 53 237-298 115-167 (293)
478 TIGR00512 salvage_mtnA S-methy 20.4 8.2E+02 0.018 24.2 9.6 38 251-290 225-264 (331)
479 cd04918 ACT_AK1-AT_2 ACT domai 20.4 1.8E+02 0.004 20.6 3.9 48 425-474 16-63 (65)
480 cd04920 ACT_AKiii-DAPDC_2 ACT 20.4 1.8E+02 0.0039 20.5 3.8 45 426-474 17-61 (63)
481 PF04909 Amidohydro_2: Amidohy 20.3 2.6E+02 0.0057 25.9 6.2 51 236-291 86-136 (273)
No 1
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-93 Score=670.58 Aligned_cols=422 Identities=65% Similarity=1.076 Sum_probs=402.9
Q ss_pred CCCCCCCCCHHHHHHHHhhhcCCCccccccCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhh
Q 011777 48 DPKPYTGPSADQVFQKRKQFLGPSIFHYYQKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKL 127 (477)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~ 127 (477)
.|+++++|..++.+.++++++++.+..++..|++|++|+|+||+|++|++|||+++|++++++|||||+|++++.+|+.+
T Consensus 2 ~p~~~~~~~~~~~~~~~~~~ls~~~~~~~~~Pl~Iv~~~~~ylyDe~G~ryLD~f~Gi~tvslGHchP~v~~a~~kQl~~ 81 (442)
T KOG1404|consen 2 MPPPYTGPSTDQVLQKRRAFLSPGLTSYYKKPLVIVRGEGQYLYDEEGRRYLDAFGGIVTVSLGHCHPDVVAAAVKQLKK 81 (442)
T ss_pred CCCccCCcchhhHHHHhhhcCCcceeccccCCceEEecceEEEEcCCCceeehhhCCeEEEEcCCCChHHHHHHHHhhhh
Confidence 45678899999999999999999988889999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCC
Q 011777 128 LQHATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTW 207 (477)
Q Consensus 128 ~~~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~ 207 (477)
+.|.++.|.+++..+|+++|.+++|.+++.++|+||||||||+||++||.|+++.+||+++++|||.+..++++++.+.|
T Consensus 82 l~H~t~~~~~~pi~~~Ae~L~s~~P~~l~~vfF~nsGsEANelal~mar~Yt~~~diIa~r~~YHG~t~~t~glt~~~~~ 161 (442)
T KOG1404|consen 82 LYHTTSGYLNPPIHDLAEALVSKLPGDLKVVFFVNSGSEANELALKMARLYTGNLDIIARRNSYHGNTLYTLGLTGLSPW 161 (442)
T ss_pred hEEeeccccCCcHHHHHHHHHHhCCCCceEEEEecCCchHHHHHHHHHHHhcCCceEEEeeccccCCchhhcccccCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCC--CCeeeecCCCCcCCCCCCC-----HHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHH
Q 011777 208 KYPIPQ--GEIHHVVNPDPYHGSFGSD-----AARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDI 280 (477)
Q Consensus 208 ~~~~~~--~~~~~~~~~~~~~~~~~~~-----~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l 280 (477)
+.+++. +++.+.+.|+++|.+|+++ ...+.+++++.+....++.+|++|+|||||.||++.++++||++++++
T Consensus 162 k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~ 241 (442)
T KOG1404|consen 162 KQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAKELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKV 241 (442)
T ss_pred cccCCCCCCcccccCCCCcccccCCCCchhhhHHHHHHHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHH
Confidence 998876 4999999999999999876 456788999999877788899999999999999999999999999999
Q ss_pred HHHhCcEEEEcCcccCccCCCCCCccccccCCCcceeeecccccCccceEEEEeCHHHHHhhcccc-cccCCCCcHHHHH
Q 011777 281 VRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIGNGLPLGAVVTTPEIANVMAQKI-QFNTFGGNPVCSA 359 (477)
Q Consensus 281 ~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pig~v~~~~~~~~~~~~~~-~~~t~~~~~~~~a 359 (477)
|+++|+++|.|||||||||+| ++|+++..++.|||+|++|++|+|+|+|++++++|+++.+.+.. +++||++||++|+
T Consensus 242 v~k~Ggl~IaDEVqtGfGRtG-~~wgfe~h~v~PDIvTmAKgiGnG~Pl~AVvtt~EIa~v~~~~~~~fnTyggnP~a~a 320 (442)
T KOG1404|consen 242 VRKRGGLFIADEVQTGFGRTG-HMWGFESHGVVPDIVTMAKGIGNGFPLGAVVTTPEIADVLNQKSSHFNTYGGNPVACA 320 (442)
T ss_pred HHHcCCEEEehhhhhcccccc-ccccccccCCCccHHHHHhhccCCCcceeeecCHHHHHHHHhccccccccCCCchhHH
Confidence 999999999999999999999 89999999999999999999999999999999999999998876 9999999999999
Q ss_pred HHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCC-CCCCccHHHHHHHHHHHHHcCc
Q 011777 360 GGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDR-KEKTPAKAETAVLFEKLRELGV 438 (477)
Q Consensus 360 aa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~-~~~~~~~~~~~~~~~~l~~~Gv 438 (477)
+++++|+++++|+++++..+.+.+|+++|.++.+++++++++||+|+|+++|+++++ ..+.|.......+.+.++++|+
T Consensus 321 vg~aVL~Vikee~LqE~aa~vG~yl~~~l~~l~d~h~iIGdVRG~GLm~GvE~V~dk~~~~pp~~~~~~~i~~~cke~Gv 400 (442)
T KOG1404|consen 321 VGLAVLKVIKEENLQENAAEVGSYLLEKLAALKDKHPIIGDVRGRGLMLGVELVSDKSEPKPPATAEGAVIGEQCKELGV 400 (442)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhcCCceeecccceeEEEEEEecccCCCCCcchHHHHHHHHHHHHhCe
Confidence 999999999999999999999999999999999999999999999999999999988 5666777778889999999999
Q ss_pred eeeccCCCCCEEEEeCCCCCcHHHHHHHHHHH
Q 011777 439 LVGKGGLHGNVFRIKPPMCFTKDDADFLVDAL 470 (477)
Q Consensus 439 ~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l 470 (477)
+++.++.+++++||.||+++|++||+.+++..
T Consensus 401 lvg~g~i~G~vfriaPPlciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 401 LVGKGGIHGNVFRIAPPLCITKEDIDFAVEYF 432 (442)
T ss_pred eeecccccceEEEecCCeeccHHHHHHHHHHH
Confidence 99999999999999999999999998888855
No 2
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=100.00 E-value=4.6e-91 Score=689.21 Aligned_cols=422 Identities=41% Similarity=0.617 Sum_probs=387.9
Q ss_pred CCCCCHHHHHHHHhhhcCCCccccccCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhcccc
Q 011777 52 YTGPSADQVFQKRKQFLGPSIFHYYQKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHA 131 (477)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~ 131 (477)
.++++..++++++.++++.+.... ..|+.+++++|+||||+|||+||||.+|+++.++||+||+|++|+++|++++.|.
T Consensus 13 ~~~~~~~~~~~r~~~~~~r~~~~~-~~p~~~~ra~G~~l~DvdG~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~~~h~ 91 (447)
T COG0160 13 APGPKALELIERREEALARSYGRF-RFPLVIVRAEGAYLYDVDGNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLNHT 91 (447)
T ss_pred CCCcchHHHHHHHHHHhccccccc-cCcceEEecccCEEEeCCCCEEEEcccCcchhccCCCCHHHHHHHHHHHHHhhcc
Confidence 567788899999999888775542 5689999999999999999999999999999999999999999999999999887
Q ss_pred ccccCC-hHHHHHHHHHHhhCCC-CCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCC-
Q 011777 132 TTIYLH-HAIADFAEALASKMPG-NLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWK- 208 (477)
Q Consensus 132 ~~~~~~-~~~~~l~~~La~~~~~-~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~- 208 (477)
...+.+ +...+++|+|.+.+|. ..++++|+|||+||||+|+|+||.+||+..||+|.++|||+|.+++++++....+
T Consensus 92 ~~~~~~~e~~v~~ae~L~~~~p~~~~~~~~f~~sGaeA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~ 171 (447)
T COG0160 92 HTRDLYYEPYVELAEKLTALAPGSGLKKVFFGNSGAEAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYK 171 (447)
T ss_pred cCCcccchhHHHHHHHHHHhCCcccCCeEEecCCcHHHHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccc
Confidence 777665 8899999999999998 6889999999999999999999999999999999999999999999999875433
Q ss_pred CCCC--CCCeeeecCCCCcCCCCCCCH----HHHHHHHHHHHh--ccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHH
Q 011777 209 YPIP--QGEIHHVVNPDPYHGSFGSDA----ARYAQDLQDHID--FGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDI 280 (477)
Q Consensus 209 ~~~~--~~~~~~~~~~~~~~~~~~~~~----~~~~~~le~~i~--~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l 280 (477)
..+. ..++.++|+|++||+++..++ ..+.+.+++.+. ...+.++|+||+||+||+||.++||++||++|+++
T Consensus 172 ~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~ 251 (447)
T COG0160 172 AGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKL 251 (447)
T ss_pred cCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHH
Confidence 2222 256999999999999987543 224555777554 23567899999999999999999999999999999
Q ss_pred HHHhCcEEEEcCcccCccCCCCCCccccccCCCcceeeecccccCccceEEEEeCHHHHHhhcccccccCCCCcHHHHHH
Q 011777 281 VRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIGNGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAG 360 (477)
Q Consensus 281 ~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aa 360 (477)
|+|||+++|+||||+|||||| ++|+++++|+.|||+|+||++|+|+|+|++++++++++ .....+.+||++||++|+|
T Consensus 252 ~~~~gillI~DEVQtG~GRTG-~~fa~E~~gv~PDivt~aK~ig~G~Pl~avv~r~ei~~-~~~g~~~~Tf~GNpva~Aa 329 (447)
T COG0160 252 CREHGILLIADEVQTGFGRTG-KMFAFEHFGVEPDIVTLAKSLGGGLPLSAVVGRAEIMD-WPPGGHGGTFGGNPVACAA 329 (447)
T ss_pred HHHcCCEEEEeccccCCCccc-cchhhhhcCCCCCEEEecccccCCCceeEEeccHHhcc-cCCcccCCCCCcCHHHHHH
Confidence 999999999999999999999 89999999999999999999999999999999999999 6677899999999999999
Q ss_pred HHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCcee
Q 011777 361 GLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLV 440 (477)
Q Consensus 361 a~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v 440 (477)
++++|++++++++.+++.+++++++++|.++.++|+.+++|||.|+|+++++++++.+++|+......+.+.++++|+++
T Consensus 330 a~AvL~vie~e~L~~~a~~~G~~l~~~L~~l~~~~~~IgdVRG~Glm~giE~v~d~~t~~p~~~~~~~i~~~~~~~Glil 409 (447)
T COG0160 330 ALAVLDVIEEENLLERAAELGEYLRDRLEELQEKHPLIGDVRGLGLMIGVELVKDRDTKEPDAELAAKIVARAFERGLLL 409 (447)
T ss_pred HHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHhhcCceecccccceEEEEEEecCCCCCCCCHHHHHHHHHHHHHcCCEE
Confidence 99999999999999999999999999999999999999999999999999999998889999999999999999999999
Q ss_pred eccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 441 GKGGLHGNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 441 ~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
..+|.++|+|||.||+++|++++|+++++|++++.+
T Consensus 410 ~~~G~~~nviRi~PPL~is~e~~d~~l~il~~al~~ 445 (447)
T COG0160 410 LTCGPHGNVLRILPPLTISDEELDEGLDILEEALKE 445 (447)
T ss_pred eccCCCCcEEEEeCCcccCHHHHHHHHHHHHHHHHh
Confidence 999989999999999999999999999999999875
No 3
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.6e-89 Score=656.57 Aligned_cols=389 Identities=38% Similarity=0.636 Sum_probs=358.7
Q ss_pred CHHHHHHHHhhhcCCCccccccCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhcccccccc
Q 011777 56 SADQVFQKRKQFLGPSIFHYYQKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIY 135 (477)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~ 135 (477)
.+....+...+++.+. |.+.|+.+++|+|+||||.+||+||||.+|+++++|||+||++++|+++|++++.|.+..|
T Consensus 5 ~~~~~~~~~~~~~~~~---Y~~~~~~~~~G~G~~v~D~~G~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h~sn~~ 81 (404)
T COG4992 5 LTAATIELFMKYLMPT---YGRLPVVIVRGEGAYVWDQQGREYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWHVSNLF 81 (404)
T ss_pred cHHHHHHHHHHhhhcc---cCcCceeEEeccccEEECCCCCEeeeeccceeeeccCCCCHHHHHHHHHHHHHhhhccccc
Confidence 3456667677776543 3456799999999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccC---CceEEEEccCccCCcccccccccCCCCCCCCC
Q 011777 136 LHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTG---NLGMIALRNAYHGGSSGTIGLTALNTWKYPIP 212 (477)
Q Consensus 136 ~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~---~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~ 212 (477)
.++...+|+++|++..| ..++|||+|||+||||+|+|+||.+++ +.+||.|.++|||+|.+++++++++.|+..+.
T Consensus 82 ~~~~~~~la~~L~~~s~-~~d~vff~NSGaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~ 160 (404)
T COG4992 82 YNEPQAELAEKLVELSP-FADRVFFCNSGAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFG 160 (404)
T ss_pred CChHHHHHHHHHHhhCc-cccEEEEcCCcHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCC
Confidence 99999999999999998 689999999999999999999999997 78999999999999999999999987776553
Q ss_pred C--CCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEE
Q 011777 213 Q--GEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIA 290 (477)
Q Consensus 213 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~ 290 (477)
+ +++.++| |++ +++++++|+ +++++||+|||||+||+++++++||+++++||++||++||+
T Consensus 161 Pl~~g~~~vp--------fnD-----i~al~~ai~----~~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~ 223 (404)
T COG4992 161 PLLPGFRHVP--------FND-----IEALEAAID----EDTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLIL 223 (404)
T ss_pred CCCCCceecC--------CCC-----HHHHHHHhc----cCeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEE
Confidence 3 5777775 443 688999997 48999999999999999999999999999999999999999
Q ss_pred cCcccCccCCCCCCccccccCCCcceeeecccccCccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhch
Q 011777 291 DEVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIGNGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDK 370 (477)
Q Consensus 291 DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~ 370 (477)
||||||+|||| ++|+++++|+.|||+|++|++|||+|+|++++++++.+.+....|++||+|||++|+++.++|+++.+
T Consensus 224 DEVQtG~GRTG-k~fA~e~~gV~PDI~tlaK~LgGG~PigA~la~~~~~~~~~~G~HgSTfGGNpLacAv~~a~l~~l~~ 302 (404)
T COG4992 224 DEVQTGLGRTG-KLFAYEHYGVEPDILTLAKALGGGFPIGAMLATEEIASAFTPGDHGSTFGGNPLACAVALAVLEVLLE 302 (404)
T ss_pred eccccCCCccc-hHHHHHHhCCCCCEEEeeccccCCccceeeEEchhhhhcCCCCcccCCCCcCHHHHHHHHHHHHHHcc
Confidence 99999999999 89999999999999999999999999999999988888899999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCCCCEE
Q 011777 371 ERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLHGNVF 450 (477)
Q Consensus 371 ~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~i 450 (477)
+++.+++++.+++++++|+++..+++.+..+||+|+|+++++..+. .+..+.+.|.++||++.+.+ .+++
T Consensus 303 e~ll~~v~~~g~~~~~~L~~l~~~~~~v~~vRG~GLmiGiel~~~~--------~a~~~~~~~~~~gvL~~~a~--~~Vi 372 (404)
T COG4992 303 EGLLENVREKGEYLLQRLRELKRRYPLVKEVRGRGLMIGIELKEPY--------RARDIVRALREEGVLVLPAG--PNVI 372 (404)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhcCCceeeeecceeEEEEEecCcc--------cHHHHHHHHHHCCeEEecCC--CCeE
Confidence 9999999999999999999999999999999999999999996531 35678999999999998866 6899
Q ss_pred EEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 451 RIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 451 Ri~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
||.||+++++|||++++++|++++++
T Consensus 373 R~~PpL~i~~eei~~~~~~l~~~l~~ 398 (404)
T COG4992 373 RFLPPLVITEEEIDEALDALERALAA 398 (404)
T ss_pred EecCCccCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999874
No 4
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=100.00 E-value=2.7e-78 Score=594.03 Aligned_cols=410 Identities=35% Similarity=0.533 Sum_probs=361.4
Q ss_pred HHhhhcCCCccc--cc-cCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhcccccc-ccCCh
Q 011777 63 KRKQFLGPSIFH--YY-QKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATT-IYLHH 138 (477)
Q Consensus 63 ~~~~~~~~~~~~--~~-~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~-~~~~~ 138 (477)
...++++..... .+ ..|.++++|+|.||||.|||+|||..+|+|++++||+||+|.+|+++|++++.|... .+.++
T Consensus 8 ~d~~~~whP~t~~~~~~~~~~~i~~aeG~yl~d~~G~r~lDg~sg~W~~~~Gh~~~~i~~Ai~~Q~~~l~~~~~~~~t~~ 87 (449)
T COG0161 8 ADLSHLWHPFTQMRDPLAEPRVIVRAEGVYLTDIDGRRYLDGMSGLWCVNHGHGRPEIAEAIKKQLDKLPHVMFGGFTHE 87 (449)
T ss_pred hhhhheeccccccccccccceeeeecceeEEEeCCCCEEEecccHHHHhhcCcCCHHHHHHHHHHHHhCCchhhcccCCc
Confidence 366676543221 11 228999999999999999999999999999999999999999999999999988744 45566
Q ss_pred HHHHHHHHHHhhCC-CCCCEEEEeCChHHHHHHHHHHHHhcc------CCceEEEEccCccCCcccccccccCCCCC-CC
Q 011777 139 AIADFAEALASKMP-GNLKVVYFVNSGTEANELAMLMARLST------GNLGMIALRNAYHGGSSGTIGLTALNTWK-YP 210 (477)
Q Consensus 139 ~~~~l~~~La~~~~-~~~~~v~~~~sGseA~~~Al~~ar~~~------~~~~ii~~~~~yhG~~~~~~~~~~~~~~~-~~ 210 (477)
+..+|+++|+++.| .++++|||++|||||||.|+|+|+.|. +|.++|+..++|||.|.+++++++..... ..
T Consensus 88 Pa~~LA~~L~~~aP~~~l~~vFf~~sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~ 167 (449)
T COG0161 88 PAIELAEKLAELAPEGGLDHVFFTDSGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAF 167 (449)
T ss_pred hHHHHHHHHHHhCCCCCccEEEEeCCchHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhh
Confidence 79999999999999 559999999999999999999999873 46679999999999999999999844322 22
Q ss_pred C--CCCCeeeecCCCCcCCCCCC-CHH---HHHHHHHHHHhccCCCCeeEEEecccCCC-CCeeeCCchhHHHHHHHHHH
Q 011777 211 I--PQGEIHHVVNPDPYHGSFGS-DAA---RYAQDLQDHIDFGTSGKVAGFIAETIQGV-GGAVELAPGYLKLVYDIVRK 283 (477)
Q Consensus 211 ~--~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~le~~i~~~~~~~~a~vi~epi~~~-~G~~~~~~~~l~~l~~l~~~ 283 (477)
. ...+..+++.|..|+.+... ... +++++||++|...+++++||||+||+.+. ||+++||++||++++++|++
T Consensus 168 ~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~k 247 (449)
T COG0161 168 YDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDK 247 (449)
T ss_pred ccccccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHH
Confidence 2 33678889999988877643 333 66889999999777799999999997777 99999999999999999999
Q ss_pred hCcEEEEcCcccCccCCCCCCccccccCCCcceeeecccccCc-cceEEEEeCHHHHHhhccc-----ccccCCCCcHHH
Q 011777 284 AGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIGNG-LPLGAVVTTPEIANVMAQK-----IQFNTFGGNPVC 357 (477)
Q Consensus 284 ~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg~G-~pig~v~~~~~~~~~~~~~-----~~~~t~~~~~~~ 357 (477)
|||+||+|||.||||||| ++|+++++|+.|||+|++|++++| +|+|++++++++.+.+... .|+.||++||++
T Consensus 248 y~ILlI~DEV~tGFGRTG-~~FA~e~~gi~PDi~~~aKGLT~GY~Pl~a~l~~~~I~~~~~~~~~~~f~HG~TYsghPla 326 (449)
T COG0161 248 YGILLIADEVATGFGRTG-KMFACEHAGIVPDILCLAKGLTGGYLPLSAVLTSDRIYEAFSDGDAGAFMHGHTYSGNPLA 326 (449)
T ss_pred cCcEEEeecceeCCCcCc-hhhhhhhcCCCCCeeeecccccccchhhHhHhhhHHHHHHHhcccCCeeccCCccccCHHH
Confidence 999999999999999999 899999999999999999999999 7999999999999988654 689999999999
Q ss_pred HHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHH-HHHHHHHHHHc
Q 011777 358 SAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAE-TAVLFEKLREL 436 (477)
Q Consensus 358 ~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~-~~~~~~~l~~~ 436 (477)
|+||+++|++++++++++++++.+.+|.++|+++...++.++++|+.|++.+++++.+..++.|.... ...+...++++
T Consensus 327 cAaAla~L~i~e~e~l~~~~~~~~~~l~~~L~~~l~~~p~VgdVR~~Gli~~iElv~d~~t~~~f~~~~~~~~~~~~~e~ 406 (449)
T COG0161 327 CAAALANLDILEEEDLLERVAEIGAYLQAGLQAALADHPLVGDVRGLGLIGAIELVADKATKTPFEARVGARVRAAALER 406 (449)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcccCCcEEEeeccceEEEEEEecccccccchhhhHHHHHHHHHHHC
Confidence 99999999999999999999999999999999976677999999999999999999988877766333 46788899999
Q ss_pred CceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 437 GVLVGKGGLHGNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 437 Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
|++++|. ++.+-++||+++|++|||++++++.+++++
T Consensus 407 Gl~iRp~---g~~i~~~PPliit~~eid~l~~~l~~al~~ 443 (449)
T COG0161 407 GLLIRPL---GDVIYLMPPLIITREEIDELVDALREALDE 443 (449)
T ss_pred CeEEeec---CCEEEEcCCccCCHHHHHHHHHHHHHHHHH
Confidence 9999987 578999999999999999999999999864
No 5
>PRK07678 aminotransferase; Validated
Probab=100.00 E-value=1.2e-76 Score=606.71 Aligned_cols=421 Identities=32% Similarity=0.532 Sum_probs=362.3
Q ss_pred CCHHHHHHHHhhhcCCCccccc-cCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhcccccc
Q 011777 55 PSADQVFQKRKQFLGPSIFHYY-QKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATT 133 (477)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~ 133 (477)
.++++++++.+++++.....+. ..|+++++|+|+||||.|||+||||.+|++++++||+||+|++|+.+|++++.+...
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~ 84 (451)
T PRK07678 5 KQTDELLAKDEQYVWHGMKPYNPNATMVVAKAEGAWVTDIQGNRYLDGMSGLWCVNVGYGRKELAEAAYEQLKTLSYFPL 84 (451)
T ss_pred cCHHHHHHHhhcccCCCccccccCCCeeEEeeeeeEEEeCCCCEEEEccccHHhhcCCCCCHHHHHHHHHHHHhcCcccc
Confidence 3567888877777654332222 248999999999999999999999999999999999999999999999998766554
Q ss_pred ccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhcc------CCceEEEEccCccCCcccccccccCCCC
Q 011777 134 IYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLST------GNLGMIALRNAYHGGSSGTIGLTALNTW 207 (477)
Q Consensus 134 ~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~------~~~~ii~~~~~yhG~~~~~~~~~~~~~~ 207 (477)
.+.++...+|+++|++.+|.. ++|+|+||||||||.|||+||.++ +|.+||.++++|||++.++++.++...+
T Consensus 85 ~~~~~~~~~lae~l~~~~~~~-~~v~f~~sGseA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~ 163 (451)
T PRK07678 85 TQSHEPAIKLAEKLNEWLGGE-YVIFFSNSGSEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQR 163 (451)
T ss_pred ccCCHHHHHHHHHHHHhCCCC-CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCccc
Confidence 567888999999999998763 689999999999999999999986 5788999999999999999999876554
Q ss_pred CCCCC--CCCeeeecCCCCcCCCCCCC----HHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHH
Q 011777 208 KYPIP--QGEIHHVVNPDPYHGSFGSD----AARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIV 281 (477)
Q Consensus 208 ~~~~~--~~~~~~~~~~~~~~~~~~~~----~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~ 281 (477)
+..+. .+++.+++.|+.++.+++.+ ...+++.++++++..+++++|+||+||+|+++|+++|+++||++|+++|
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc 243 (451)
T PRK07678 164 KYKYEPLAPGFLHVPPPDCYRMPGIESEDIYDLECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEIC 243 (451)
T ss_pred ccccCCCCCCCEEeCCCccccccccCChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHH
Confidence 43332 25788888888888776432 2334566788886444578999999999999999999999999999999
Q ss_pred HHhCcEEEEcCcccCccCCCCCCccccccCCCcceeeecccccCc-cceEEEEeCHHHHHhhcc------cccccCCCCc
Q 011777 282 RKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIGNG-LPLGAVVTTPEIANVMAQ------KIQFNTFGGN 354 (477)
Q Consensus 282 ~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg~G-~pig~v~~~~~~~~~~~~------~~~~~t~~~~ 354 (477)
++||+++|+|||||||||+| ++|+++++|+.||++|+||+++|| +|+|++++++++++.+.. ..|++||++|
T Consensus 244 ~~~g~llI~DEV~tGfGRtG-~~~~~~~~gv~PDivt~gK~lggG~~Pi~av~~~~~i~~~~~~~~~~~~~~h~~T~~gn 322 (451)
T PRK07678 244 QKHGALLISDEVICGFGRTG-KAFGFMNYGVKPDIITMAKGITSAYLPLSATAVKKEIYEAFKGKGEYEHFRHVNTFGGN 322 (451)
T ss_pred HHcCCEEEEeehhhcCCcCc-hhHHHHhcCCCCCEEEeecccccCCcceeEEEEcHHHHHHHhccCcccccccCCCCCcC
Confidence 99999999999999999999 799999999999999999999999 799999999999998863 2488999999
Q ss_pred HHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCc-cHHHHHHHHHHH
Q 011777 355 PVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTP-AKAETAVLFEKL 433 (477)
Q Consensus 355 ~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~-~~~~~~~~~~~l 433 (477)
|++|++++++|++++++++++++++++++|+++|+++.++++.+.++||.|+|+++++..+...+.| +......+.+.|
T Consensus 323 p~~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~~~~~~~~v~~vrg~Gl~~~i~~~~~~~~~~~~~~~~a~~i~~~l 402 (451)
T PRK07678 323 PAACALALKNLEIMENENLIERSAQLGELLLEQLKEELGEHPLVGDIRGKGLLVGIELVNDKETKEPADNDKVASVVAAC 402 (451)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEeeceEEEEEEecCCcccCcCchHHHHHHHHHH
Confidence 9999999999999998999999999999999999988888999999999999999999865433333 334567889999
Q ss_pred HHcCceeeccCC----CCCEEEEeCCCCCcHHHHHHHHHHHHHHHhhC
Q 011777 434 RELGVLVGKGGL----HGNVFRIKPPMCFTKDDADFLVDALDYSMSKL 477 (477)
Q Consensus 434 ~~~Gv~v~~~~~----~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~l 477 (477)
+++||++.+.+. .++.+||+||+++|++|||+++++|++++.++
T Consensus 403 ~~~Gv~~~~~g~~v~~~~~~lrl~Ppl~it~~eid~~~~~l~~~l~~~ 450 (451)
T PRK07678 403 KEKGLIIGKNGDTVAGYNNVLTLSPPLVISSEEIAFIVGTLKTALERI 450 (451)
T ss_pred HHCCcEEeecCccccCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHhc
Confidence 999999976432 24889999999999999999999999998764
No 6
>PRK05965 hypothetical protein; Provisional
Probab=100.00 E-value=1.3e-76 Score=607.08 Aligned_cols=416 Identities=31% Similarity=0.506 Sum_probs=355.2
Q ss_pred HHHHHHHHhhhcCCCcccc--c--cCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccc
Q 011777 57 ADQVFQKRKQFLGPSIFHY--Y--QKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHAT 132 (477)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~--~--~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~ 132 (477)
+.++.++..++.+.....+ . ..|+++++|+|+||||.|||+||||.+|++++++||+||+|++|+.+|++++.+..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~ 82 (459)
T PRK05965 3 SNSLIELDRAHLIHPVASYRGHEARGVTVLASAKGATLTDASGHQLLDAFAGLWCVNVGYGQESIVEAAAEQMRELPYAT 82 (459)
T ss_pred hHHHHHhhhhccccccccccccccCCCceEEeeeEeEEEECCCCEEEECcccHHhccCCCCCHHHHHHHHHHHHhcCCcc
Confidence 4456666555543322111 1 24789999999999999999999999999999999999999999999999876644
Q ss_pred c--ccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhc------cCCceEEEEccCccCCcccccccccC
Q 011777 133 T--IYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLS------TGNLGMIALRNAYHGGSSGTIGLTAL 204 (477)
Q Consensus 133 ~--~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~------~~~~~ii~~~~~yhG~~~~~~~~~~~ 204 (477)
. .+.++...+|+++|++.+|.+.++|+|++|||||||.|||+||.| ++|.+||+++++|||++.+++++++.
T Consensus 83 ~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~ 162 (459)
T PRK05965 83 GYFHFGSEPAIRLAAKLAERAPGSLNHVYFTLGGSDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTAL 162 (459)
T ss_pred cccccCCHHHHHHHHHHHhhCCCCcCEEEEeCChhHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCC
Confidence 3 356788899999999999877889999999999999999999998 45889999999999999998888876
Q ss_pred CCCCCCCC--CCCeeeecCCCCcCCCCCCCH----HHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHH
Q 011777 205 NTWKYPIP--QGEIHHVVNPDPYHGSFGSDA----ARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVY 278 (477)
Q Consensus 205 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~----~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~ 278 (477)
+.++.... ..++.+++.|++++++++++. ..++++++++++...++++++||+||+|+++|+++|+++||++|+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr 242 (459)
T PRK05965 163 PAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMR 242 (459)
T ss_pred chhhcccCCCCCCCEEcCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHH
Confidence 54443322 245567777888887776553 235677888887544478999999999999999999999999999
Q ss_pred HHHHHhCcEEEEcCcccCccCCCCCCccccccCCCcceeeecccccCc-cceEEEEeCHHHHHhhcc-------cccccC
Q 011777 279 DIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIGNG-LPLGAVVTTPEIANVMAQ-------KIQFNT 350 (477)
Q Consensus 279 ~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg~G-~pig~v~~~~~~~~~~~~-------~~~~~t 350 (477)
++|++||++||+|||||||||+| ++|+++++|+.|||+|+||+++|| +|+|++++++++++.+.. ..|++|
T Consensus 243 ~lc~~~gillI~DEV~tGfGRtG-~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T 321 (459)
T PRK05965 243 EACRELGILFVADEVITGFGRTG-PLFACEAEGVVPDLMTVAKGLTSGYVPMGAVLMSDHVYQGIADGAGAAAPVGHGYT 321 (459)
T ss_pred HHHHHcCCEEEEechhccCccCc-hhhhHhhcCCCCCeEEechhhccCCcceeEEEEcHHHHHHHhccccccccccccCC
Confidence 99999999999999999999999 799999999999999999999999 599999999999988753 258899
Q ss_pred CCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCc---cHHHHH
Q 011777 351 FGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTP---AKAETA 427 (477)
Q Consensus 351 ~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~---~~~~~~ 427 (477)
|++||++|++++++|++++++++.+++++++++|+++|+++. +++.+.++||.|+|+++++..+...+.+ ......
T Consensus 322 ~~gnpl~~Aaa~a~L~~l~~~~l~~~~~~~g~~l~~~l~~l~-~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~ 400 (459)
T PRK05965 322 YSAHPVSAAVGLEVLRLYHEGGLLANGQKAGPRFAAGLDALR-AHPLVGDVRGRGLLGALELVADKATKTPFDAALDPAD 400 (459)
T ss_pred CCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhc-cCCCEEEEeecceEEEEEEeccccccCCCCchhHHHH
Confidence 999999999999999999999999999999999999999985 5899999999999999999865433333 122456
Q ss_pred HHHHHHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 428 VLFEKLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 428 ~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
.+.+.++++||++.+.+ .+++|+.||+++|++||++++++|++++++
T Consensus 401 ~i~~~~~~~Gll~~~~g--~~~i~~~PpL~it~~ei~~~~~~l~~~l~~ 447 (459)
T PRK05965 401 RIFDRAYANGLVFRAFG--DGVLGFAPALCCTEGEFDLIFERTRKTLDD 447 (459)
T ss_pred HHHHHHHhCCeEEEecC--CcEEEEECCCcCCHHHHHHHHHHHHHHHHH
Confidence 78899999999998754 578999999999999999999999999865
No 7
>PRK07482 hypothetical protein; Provisional
Probab=100.00 E-value=4e-76 Score=603.75 Aligned_cols=420 Identities=29% Similarity=0.449 Sum_probs=357.2
Q ss_pred CCHHHHHHHHhhhcCCCcc---ccc---cCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhc
Q 011777 55 PSADQVFQKRKQFLGPSIF---HYY---QKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLL 128 (477)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~---~~~---~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~ 128 (477)
.+++++.++.+++++.... .+. ..|+++++|+|+||||.|||+||||.+|++++++||+||+|++|+++|++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~sg~~~~~lGh~~p~v~~Av~~q~~~~ 82 (461)
T PRK07482 3 QKIDELLAWDRDHFFHPSTHLGDHARGELPGRIVEGGEGIRITDAQGRRYIDAFAGLYCVNVGYGRTEVAEAIAEQAKEL 82 (461)
T ss_pred ccHHHHHHhhhhhccCCcccccccccccCCCeeEEeeeeeEEEECCCCEEEEcccchhhhcCCCCCHHHHHHHHHHHHhc
Confidence 3567788877666543321 111 2379999999999999999999999999999999999999999999999997
Q ss_pred ccccc--ccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhc------cCCceEEEEccCccCCcccccc
Q 011777 129 QHATT--IYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLS------TGNLGMIALRNAYHGGSSGTIG 200 (477)
Q Consensus 129 ~~~~~--~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~------~~~~~ii~~~~~yhG~~~~~~~ 200 (477)
.+... .+.++...+|+++|++..|.+.++|+|+||||||+|+|||+||.+ ++|.+||+++++|||++.++++
T Consensus 83 ~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s 162 (461)
T PRK07482 83 AYYHTYVGHGTEASITLSKRIIDRAPAGMSKVYYGLSGSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGS 162 (461)
T ss_pred CccccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhh
Confidence 64432 466888999999999999877899999999999999999999976 3588999999999999999999
Q ss_pred cccCCCCCCCCC--CCCeeeecCCCCcCCCC-CCCH----HHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchh
Q 011777 201 LTALNTWKYPIP--QGEIHHVVNPDPYHGSF-GSDA----ARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGY 273 (477)
Q Consensus 201 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~----~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~ 273 (477)
+++.+.++..+. ..++.+++.|+.+++++ +... ..+++++++++....++++|+||+||+||++|+++++++|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~y 242 (461)
T PRK07482 163 LTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGY 242 (461)
T ss_pred ccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHH
Confidence 987665544332 25677777777766543 2111 2256778888864445789999999999999999999999
Q ss_pred HHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCcceeeecccccCcc-ceEEEEeCHHHHHhhcc-------c
Q 011777 274 LKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIGNGL-PLGAVVTTPEIANVMAQ-------K 345 (477)
Q Consensus 274 l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~-pig~v~~~~~~~~~~~~-------~ 345 (477)
|++|+++|++||+++|+|||||||||+| ++|+++++|+.||++|+||+++||+ |+|++++++++++.+.. .
T Consensus 243 l~~lr~lc~~~giLlI~DEV~tGfGRtG-~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~ 321 (461)
T PRK07482 243 WPAIQAVLKKYDILLIADEVVTGFGRLG-SMFGSDHYGIEPDLITVAKGLTSAYAPLSGSIVGEKVWDVLEQGSDEHGAI 321 (461)
T ss_pred HHHHHHHHHHhCCEEEEeccccCCCcCc-chhhHHhcCCCCCEEEEccccccCccccceeeecHHHHHHHhcccccCCcc
Confidence 9999999999999999999999999999 7999999999999999999999995 99999999999987752 2
Q ss_pred ccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccH--
Q 011777 346 IQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAK-- 423 (477)
Q Consensus 346 ~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~-- 423 (477)
.|++||++||++|+|++++|++++++++++++++++++|+++|+++..+++.+.++||.|+|++++++.+...+.|..
T Consensus 322 ~h~~T~~gnpl~~Aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Glm~giel~~~~~~~~~~~~~ 401 (461)
T PRK07482 322 GHGWTYSGHPICAAAALANLDILERENLVGNAAEVGAYFRARLRAAFGDHPLVGEVRGVGMLAAVEFVADRDDRTPFDPA 401 (461)
T ss_pred ccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeeceeEEEEEeccCCCcCCCCChh
Confidence 488999999999999999999999999999999999999999999999999999999999999999986543333321
Q ss_pred -HHHHHHHHHHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 424 -AETAVLFEKLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 424 -~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
.....+...|+++||++.+.. .++++||.||+++|++||++++++|++++++
T Consensus 402 ~~~~~~i~~~~~~~Gvl~~~~~-~~~~i~~~Ppl~it~~ei~~~~~~l~~~l~~ 454 (461)
T PRK07482 402 LKIGPQVSAAALERGVIARAMP-HGDILGFAPPLVLTRAEADEIVAIAKDAVDE 454 (461)
T ss_pred hHHHHHHHHHHHHCCcEEecCC-CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 234678899999999986532 3589999999999999999999999999864
No 8
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=2.5e-75 Score=597.18 Aligned_cols=419 Identities=32% Similarity=0.489 Sum_probs=357.3
Q ss_pred CCCCCHHHHHHHHhhhcCCCccccccCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhcccc
Q 011777 52 YTGPSADQVFQKRKQFLGPSIFHYYQKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHA 131 (477)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~ 131 (477)
.+.|++.+++++..++++..... ..|+++++|+|+||||.|||+||||.+|++++++||+||+|++|+.+|++++.+.
T Consensus 14 ~~~~~s~~~~~~~~~~~~~~~~~--~~p~~i~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~ 91 (443)
T PRK06058 14 IPGPKSQALAERRAAAVAAGVGS--TLPVYVARAGGGIVEDVDGNRLIDLGSGIAVTSVGNSAPRVVEAVREQVARFTHT 91 (443)
T ss_pred CCCccHHHHHHHHHHhhcccccc--CCCceEEeeeeeEEEeCCCCEEEEcCcchhhhccCCCCHHHHHHHHHHHHhccCc
Confidence 45677888888877777554322 3589999999999999999999999999999999999999999999999987554
Q ss_pred cc-ccCChHHHHHHHHHHhhCCCC-CCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCC-CCC
Q 011777 132 TT-IYLHHAIADFAEALASKMPGN-LKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALN-TWK 208 (477)
Q Consensus 132 ~~-~~~~~~~~~l~~~La~~~~~~-~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~-~~~ 208 (477)
.. .+.++...+++++|++.+|.. .++++|++||+|||+.|+|+||.+++|++||+++++|||++.+++++++.. .++
T Consensus 92 ~~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~ 171 (443)
T PRK06058 92 CFMVTPYEGYVAVAEQLNRLTPGDHEKRSALFNSGAEAVENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYK 171 (443)
T ss_pred cccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccc
Confidence 33 246788899999999999854 369999999999999999999999999999999999999999999987642 233
Q ss_pred CCCC--CCCeeeecCCCCcCCCCCC--CHHH----HHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHH
Q 011777 209 YPIP--QGEIHHVVNPDPYHGSFGS--DAAR----YAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDI 280 (477)
Q Consensus 209 ~~~~--~~~~~~~~~~~~~~~~~~~--~~~~----~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l 280 (477)
..+. .+++..++.|.+++.+... +... +.+.+++.+ .++++|+||+||+|+++|+++|+++||++|+++
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~l 248 (443)
T PRK06058 172 SGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQV---GADNLAAVIIEPIQGEGGFIVPAEGFLPALLEW 248 (443)
T ss_pred cccCCCCCCceEcCCCcccccccccccchHHHHHHHHHHHHHhh---CCCceEEEEECCccCCCCCcCCCHHHHHHHHHH
Confidence 2221 2455666666666543211 1112 223333333 246899999999999999999999999999999
Q ss_pred HHHhCcEEEEcCcccCccCCCCCCccccccCCCcceeeecccccCccceEEEEeCHHHHHhhcccccccCCCCcHHHHHH
Q 011777 281 VRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIGNGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAG 360 (477)
Q Consensus 281 ~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aa 360 (477)
|++||+++|+||||+||||+| .+|+++++|+.||++|+||+++||+|+|++++++++++.+....+++||++||++|+|
T Consensus 249 c~~~gillI~DEV~tGfgRtG-~~fa~~~~gv~PDiv~~gK~l~~G~Pi~av~~~~~i~~~~~~~~~~~T~~gnpl~~aa 327 (443)
T PRK06058 249 CRENGVVFIADEVQTGFARTG-AWFACEHEGIVPDLITTAKGIAGGLPLSAVTGRAEIMDAPHPGGLGGTYGGNPVACAA 327 (443)
T ss_pred HHHcCCEEEEeccccCCCcCh-hhhHHHhcCCCCCEEEEcccccCCCccEEEEEcHHHHhhccCCCCCCCCCCCHHHHHH
Confidence 999999999999999999999 7889999999999999999999999999999999999998877788999999999999
Q ss_pred HHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCcee
Q 011777 361 GLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLV 440 (477)
Q Consensus 361 a~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v 440 (477)
++++|+.++++++.+++++++++++++|+++..+++.+.+++|.|+|+++++..+. .+.++......+.+.|+++||++
T Consensus 328 a~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~~i~~~~~~-~~~~~~~~~~~l~~~~~~~Gv~~ 406 (443)
T PRK06058 328 ALAAIETIEEDDLVARARQIEALMTDRLRALAAEDDRIGDVRGRGAMIAIELVKPG-TTEPDAELTKALAAAAHAAGVIV 406 (443)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhCCcEEeeeccceEEEEEEecCC-CCCCcHHHHHHHHHHHHHCCeEE
Confidence 99999999989999999999999999999998889999999999999999997653 23344455677889999999999
Q ss_pred eccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHHHhhC
Q 011777 441 GKGGLHGNVFRIKPPMCFTKDDADFLVDALDYSMSKL 477 (477)
Q Consensus 441 ~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~l 477 (477)
.+++.+++++||.||+++|++||++++++|+++++++
T Consensus 407 ~~~~~~~~~lr~~Ppl~~t~~~i~~~~~~l~~~l~~~ 443 (443)
T PRK06058 407 LTCGTYGNVIRLLPPLVIGDELLREGLDVLEAALADL 443 (443)
T ss_pred eccCCCCCEEEEECCCccCHHHHHHHHHHHHHHHHhC
Confidence 8876667899999999999999999999999999764
No 9
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=2e-75 Score=597.77 Aligned_cols=417 Identities=29% Similarity=0.464 Sum_probs=352.3
Q ss_pred HHHHHHHhhhcCCCccccccCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhcc-ccccccC
Q 011777 58 DQVFQKRKQFLGPSIFHYYQKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQ-HATTIYL 136 (477)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~-~~~~~~~ 136 (477)
++++++..++.+.........|+.+++|+|+||||.|||+||||.+|++++++||+||+|++|+++|+++.. +....+.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~ 104 (464)
T PRK06938 25 SPLLERQSRRESNARSYPRRIPLALKRARGIYVEDVEGRQFIDCLAGAGTLALGHNHPVVIEAIQQVLADELPLHTLDLT 104 (464)
T ss_pred HHHHHHHHhhhhhccccccCCCceEEeccccEEEeCCCCEEEEccCCccccccCCCCHHHHHHHHHHHHhhhcccccccC
Confidence 467777655532211111245899999999999999999999999999999999999999999999997533 3222456
Q ss_pred ChHHHHHHHHHHhhCCCCC---CEEEEe-CChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCC
Q 011777 137 HHAIADFAEALASKMPGNL---KVVYFV-NSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIP 212 (477)
Q Consensus 137 ~~~~~~l~~~La~~~~~~~---~~v~~~-~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~ 212 (477)
++...+|+++|.+.+|.++ ++++|+ ||||||++.|||+||.+++|.+||+++++|||++.+++++++...++..+.
T Consensus 105 ~~~~~~la~~L~~~~p~~~~~~~~v~f~~~SGSEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~ 184 (464)
T PRK06938 105 TPVKDQFVQDLFASLPEAFAREAKIQFCGPTGTDAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLG 184 (464)
T ss_pred CHHHHHHHHHHHHhCcccccccceEEEeCCCcHHHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCC
Confidence 8889999999999988654 367665 899999999999999999999999999999999999999887544433222
Q ss_pred --CCCeeeecCCCCcCCCCCCCHH----HHHHHHHHHHhcc--CCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHh
Q 011777 213 --QGEIHHVVNPDPYHGSFGSDAA----RYAQDLQDHIDFG--TSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKA 284 (477)
Q Consensus 213 --~~~~~~~~~~~~~~~~~~~~~~----~~~~~le~~i~~~--~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~ 284 (477)
.+++.+++.|+.++++++.... .+++.++++++.. +.+++|+||+||+|+++|+++|+++||++|+++|++|
T Consensus 185 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~ 264 (464)
T PRK06938 185 ALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEA 264 (464)
T ss_pred CCCCCcEEeCCCccccccccCchhhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHc
Confidence 2467778888877777654322 2467788888632 2247999999999999999999999999999999999
Q ss_pred CcEEEEcCcccCccCCCCCCccccccCCCcceeeecccccCccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHH
Q 011777 285 GGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIGNGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAV 364 (477)
Q Consensus 285 gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~ 364 (477)
|+++|+|||||||||+| ++|+++++|+.|||+|+||+++||+|+|++++++++ +.+....|++||++||++|+|++++
T Consensus 265 giLlI~DEV~tGfGRtG-~~~a~e~~gv~PDiv~~gKglggG~PlsAv~~~~~~-~~~~~~~~~~T~~gnpla~Aaa~a~ 342 (464)
T PRK06938 265 GIPLIVDEIQSGFGRTG-KMFAFEHAGIIPDVVVLSKAIGGSLPLAVVVYREWL-DTWQPGAHAGTFRGNQMAMAAGSAT 342 (464)
T ss_pred CCEEEEeccccCCCcCc-HHHHHHhcCCCCCEEEeeccccCCCceEEEeehhHh-hccCCCCCCCCCCcCHHHHHHHHHH
Confidence 99999999999999999 899999999999999999999999999999999885 6665567889999999999999999
Q ss_pred HHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCC-----Cc-cHHHHHHHHHHHHHcCc
Q 011777 365 LRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEK-----TP-AKAETAVLFEKLRELGV 438 (477)
Q Consensus 365 l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~-----~~-~~~~~~~~~~~l~~~Gv 438 (477)
|++++++++++++++++++|+++|+++.++++.+.++||.|+|++++++.+...+ .+ .......+.+.|+++||
T Consensus 343 L~~l~~~~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gl 422 (464)
T PRK06938 343 LRYIKEHRLAEHAAAMGERLREHLRQLQRDYPQLGDVRGRGLMLGVEIVDPQGEPDALGHPPANGELASLIQRECLRRGL 422 (464)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEeccCcccccccccCCccHHHHHHHHHHHHHCCe
Confidence 9999999999999999999999999999899999999999999999997543221 12 22345678889999999
Q ss_pred eeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 439 LVGKGGLHGNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 439 ~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
++.+++..++++||.||+++|++||++++++|++++.+
T Consensus 423 l~~~~g~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~ 460 (464)
T PRK06938 423 ILELGGRHGSVVRFLPPLIITAEQIDEVAEIFAEAVAA 460 (464)
T ss_pred EEeecCCCCCEEEEECCCccCHHHHHHHHHHHHHHHHH
Confidence 99876656799999999999999999999999999865
No 10
>PRK06062 hypothetical protein; Provisional
Probab=100.00 E-value=2.3e-75 Score=596.59 Aligned_cols=415 Identities=32% Similarity=0.519 Sum_probs=355.8
Q ss_pred HHHHHHHhhhcCCCcccc-ccCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccccC
Q 011777 58 DQVFQKRKQFLGPSIFHY-YQKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIYL 136 (477)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~-~~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~~ 136 (477)
++.++...+++++..... ...|+++++|+|+||||.|||+||||.+|++++++||+||+|++|+.+|++++.+....+.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~ 93 (451)
T PRK06062 14 ARAYALDRAHVFHSWSAQGKINPMVIAGAEGSYVWDYEGRRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLCTVAPAHA 93 (451)
T ss_pred HHHHHhhhhhccccccccccCCCceEEeceeeEEEECCCCEEEEcccCHHhhcCCCCCHHHHHHHHHHHHhcCCcCCccC
Confidence 344555555544332221 2358999999999999999999999999999999999999999999999999877655677
Q ss_pred ChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCC-CCC
Q 011777 137 HHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIP-QGE 215 (477)
Q Consensus 137 ~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~-~~~ 215 (477)
++...+|+++|+++.|.+.++|+|++|||||++.|+|+||.+++|.+||+++++|||++.+++++++.+.++...+ .++
T Consensus 94 ~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~ 173 (451)
T PRK06062 94 NDARSEAARLIAERAPGDLSKVFFTNGGADANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAG 173 (451)
T ss_pred CHHHHHHHHHHHHhCCCCCCEEEEcCChHHHHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCC
Confidence 8999999999999998778899999999999999999999999999999999999999999999987554332212 257
Q ss_pred eeeecCCCCcCCCCC--CCH---HHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEE
Q 011777 216 IHHVVNPDPYHGSFG--SDA---ARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIA 290 (477)
Q Consensus 216 ~~~~~~~~~~~~~~~--~~~---~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~ 290 (477)
+..++.|+++++++. ++. ..++++++++++...++++++||+||+++++|+++|+++||++|+++|++||++||+
T Consensus 174 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~ 253 (451)
T PRK06062 174 VVHFFGPFLYRSEFHATTEEEECERALAHLERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIA 253 (451)
T ss_pred CEEeCCCCccccccCCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEe
Confidence 777888888887763 221 234677888886443478999999999999999999999999999999999999999
Q ss_pred cCcccCccCCCCCCccccccCCCcceeeecccccCcc-ceEEEEeCHHHHHhhccc--ccccCCCCcHHHHHHHHHHHHh
Q 011777 291 DEVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIGNGL-PLGAVVTTPEIANVMAQK--IQFNTFGGNPVCSAGGLAVLRV 367 (477)
Q Consensus 291 DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~-pig~v~~~~~~~~~~~~~--~~~~t~~~~~~~~aaa~a~l~~ 367 (477)
||||+||||+| .+|+++++|+.||++||||+++||+ |+|++++++++++.+... .+++||++||++|++++++|++
T Consensus 254 DEV~tGfGRtG-~~~a~~~~gv~PDi~t~gK~lggG~~Pigav~~~~~i~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~ 332 (451)
T PRK06062 254 DEVMAGFGRTG-KWFAIEHFGVVPDLITFAKGVNSGYVPLGGVAISEAIAATFADRPYPGGLTYSGHPLACAAAVATINA 332 (451)
T ss_pred eccccCCCcCc-HHHHHHhcCCCCCeeeechhhhcCCcCcEEEEEcHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 99999999999 7999999999999999999999995 999999999999988643 4778999999999999999999
Q ss_pred hchhhHHHHHHHHH-HHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCcc------HHHHHHHHHHHHHcCcee
Q 011777 368 IDKERRQAHCADVG-SHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPA------KAETAVLFEKLRELGVLV 440 (477)
Q Consensus 368 l~~~~~~~~~~~~~-~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~------~~~~~~~~~~l~~~Gv~v 440 (477)
++++++.+++++++ ++++++|+++..+++.+.+++|.|+|+++++..+...+.|. ......+.+.|+++||++
T Consensus 333 l~~~~l~~~~~~~G~~~l~~~L~~l~~~~~~v~~vrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gvl~ 412 (451)
T PRK06062 333 MEEEGIVENAARIGAEVLGPGLRELAERHPSVGEVRGLGVFWALELVADRETREPLAPYGASSAAMAAVKAACKERGLLP 412 (451)
T ss_pred HHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcEEeEeccccEEEEEEcccccccCCCcccchhhHHHHHHHHHHHHCCcEE
Confidence 99889999999999 69999999999889999999999999999997543322221 123567889999999998
Q ss_pred eccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 441 GKGGLHGNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 441 ~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
.+. ++.+||+||+++|++|||+++++|++++++
T Consensus 413 ~~~---~~~lrl~ppl~~t~~eid~~~~~l~~~l~~ 445 (451)
T PRK06062 413 FVN---GNRIHVVPPCTVTEDEVREGLAILDAALAV 445 (451)
T ss_pred eec---CCEEEEECCccCCHHHHHHHHHHHHHHHHH
Confidence 753 578999999999999999999999999875
No 11
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=6.7e-75 Score=592.82 Aligned_cols=420 Identities=30% Similarity=0.478 Sum_probs=360.2
Q ss_pred CCCCCHHHHHHHHhhhcCCCccccccCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhcccc
Q 011777 52 YTGPSADQVFQKRKQFLGPSIFHYYQKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHA 131 (477)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~ 131 (477)
.++|++++++++..+++..... ....|+++++|+|+||||.|||+||||.+|++++++||+||+|++|+.+|++++.+.
T Consensus 10 ~~~~~s~~~~~~~~~~~~~~~~-~~~~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~ql~~~~~~ 88 (457)
T PRK05639 10 PPGPKAKELIEREKRVLSPGIG-VKLFPLVPKRGFGALIEDVDGNVFIDFLAGAAAASTGYSHPKLVKAVQEQVALIQHS 88 (457)
T ss_pred CCCCCHHHHHHHHHHhhccccC-cCCCCceEEeeecCEEEeCCCCEEEECCcCHHhhccCCCCHHHHHHHHHHHHhcccc
Confidence 5677888898887777655431 123589999999999999999999999999999999999999999999999987654
Q ss_pred ccc-cCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccC-CCCCC
Q 011777 132 TTI-YLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTAL-NTWKY 209 (477)
Q Consensus 132 ~~~-~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~-~~~~~ 209 (477)
... +.++...+|+++|++.+|.+.++|+|+||||||||.|+|+||.+++|.+||.++++|||++.+++++++. ..++.
T Consensus 89 ~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~ 168 (457)
T PRK05639 89 MIGYTHSERAIRVAEKLAEISPIENPKVLFGLSGSDAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKR 168 (457)
T ss_pred ccCccCCHHHHHHHHHHHhhCCCCcCEEEEeCchHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCccccc
Confidence 433 3467888999999999987678999999999999999999999999999999999999999999988764 22332
Q ss_pred CCC--CCCeeeecCCCCcCCCCCC----CH----HHHHHHHHHHHhc--cCCCCeeEEEecccCCCCCeeeCCchhHHHH
Q 011777 210 PIP--QGEIHHVVNPDPYHGSFGS----DA----ARYAQDLQDHIDF--GTSGKVAGFIAETIQGVGGAVELAPGYLKLV 277 (477)
Q Consensus 210 ~~~--~~~~~~~~~~~~~~~~~~~----~~----~~~~~~le~~i~~--~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l 277 (477)
.+. .+++.++++|++++++++. +. ..+++.+++++.. ..++++|+||+||+|+++|+++|+++||++|
T Consensus 169 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l 248 (457)
T PRK05639 169 GFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKEL 248 (457)
T ss_pred CCCCCCCCceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHH
Confidence 222 2567888888887766542 11 1244567766532 2357899999999999999999999999999
Q ss_pred HHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCcceeeecccccCccceEEEEeCHHHHHhhcccccccCCCCcHHH
Q 011777 278 YDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIGNGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVC 357 (477)
Q Consensus 278 ~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~ 357 (477)
+++|++||+++|+||||+||||+| .+|+++++|+.||+++|||+++||+|+|++++++++++ +....+.+||++||++
T Consensus 249 ~~lc~~~g~llI~DEv~tG~GrtG-~~~a~~~~gv~PDiv~~gK~l~gG~pi~av~~~~~i~~-~~~~~~~~T~~g~p~~ 326 (457)
T PRK05639 249 KKLLDEHGILLVMDEVQTGIGRTG-KWFASEWFEVKPDLIIFGKGVASGMGLSGVIGRKELMD-LTSGSALLTPAANPVI 326 (457)
T ss_pred HHHHHHcCCEEEEechhhccCcCc-hHHHHHhcCCCCCEEEechhhcCCCcceeEEehHHHHh-hcCCCcccCCCcCHHH
Confidence 999999999999999999999999 78999999999999999999999999999999999998 3334567899999999
Q ss_pred HHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcC
Q 011777 358 SAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELG 437 (477)
Q Consensus 358 ~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~G 437 (477)
|+|++++|++++++++++++++++++|+++|+++..+++.+.++||.|+|+++++..+.. .++......+.+.|+++|
T Consensus 327 ~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~VrG~Gl~~gve~~~~~~--~~~~~~~~~~~~~~~~~G 404 (457)
T PRK05639 327 SAAAEATLEIIEEENLLKNALKVGEFIKKRLLEMKESFEVIGDVRGKGLMIGVEIVKENG--KPDPELTGKICWRAFELG 404 (457)
T ss_pred HHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHhCCCEEeeccceeEEEEEEecCCC--CCCHHHHHHHHHHHHhCC
Confidence 999999999999999999999999999999999998999999999999999999975422 234445678899999999
Q ss_pred ceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 438 VLVGKGGLHGNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 438 v~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
+++.+.+..++++||.||+++|++|||+++++|++++++
T Consensus 405 v~~~~~g~~~~~lr~~Ppl~it~~~id~~~~~l~~~l~~ 443 (457)
T PRK05639 405 LILPSYGMFGNVIRITPPLVITKEIAEKGLEIMERAIKD 443 (457)
T ss_pred eEEeecCCCCCEEEEeCCCccCHHHHHHHHHHHHHHHHH
Confidence 999876555689999999999999999999999999864
No 12
>PRK07481 hypothetical protein; Provisional
Probab=100.00 E-value=5.1e-75 Score=594.28 Aligned_cols=396 Identities=34% Similarity=0.565 Sum_probs=347.2
Q ss_pred CceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhcccccc--ccCChHHHHHHHHHHhhCC-CC
Q 011777 78 KPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATT--IYLHHAIADFAEALASKMP-GN 154 (477)
Q Consensus 78 ~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~--~~~~~~~~~l~~~La~~~~-~~ 154 (477)
.|+++++|+|+||||.|||+||||.+|++++++||+||+|++|+.+|++++.+... .+.++...+++++|++.+| .+
T Consensus 24 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~~~~~ 103 (449)
T PRK07481 24 PPIIIVRGDGVYVYDIDGKKLLDGVGGLWNVNVGHNREEVKEAIVRQLDELEYYSTFDGTTHPRAIELSYELIDMFAPEG 103 (449)
T ss_pred CCceEEeccccEEEeCCCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhccceecccccCCHHHHHHHHHHHHhcCCCC
Confidence 58999999999999999999999999999999999999999999999998766433 3578889999999999984 45
Q ss_pred CCEEEEeCChHHHHHHHHHHHHhcc------CCceEEEEccCccCCcccccccccCCCCCCCCC--CCCeeeecCCCCcC
Q 011777 155 LKVVYFVNSGTEANELAMLMARLST------GNLGMIALRNAYHGGSSGTIGLTALNTWKYPIP--QGEIHHVVNPDPYH 226 (477)
Q Consensus 155 ~~~v~~~~sGseA~~~Al~~ar~~~------~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 226 (477)
.++|+|++|||||+|+|+|+||.++ +|.+||.++++|||++.+++++++...++..+. .+++.+++.|+.++
T Consensus 104 ~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 183 (449)
T PRK07481 104 MRRVFFSSGGSDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYR 183 (449)
T ss_pred CCEEEEcCchHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccc
Confidence 7899999999999999999999985 688999999999999999999887654443322 25788888888888
Q ss_pred CCCC-CCHH----HHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCC
Q 011777 227 GSFG-SDAA----RYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTG 301 (477)
Q Consensus 227 ~~~~-~~~~----~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G 301 (477)
++++ .|.. .+.+.+|++|...+++++|+||+||+|+++|+++|+++||++|+++|++||+++|+|||||||||+|
T Consensus 184 ~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG 263 (449)
T PRK07481 184 NPFTEQDPEELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTG 263 (449)
T ss_pred cccCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCc
Confidence 8887 2322 2345677777644567899999999999999999999999999999999999999999999999999
Q ss_pred CCCccccccCCCcceeeecccccCc-cceEEEEeCHHHHHhhcc-------cccccCCCCcHHHHHHHHHHHHhhchhhH
Q 011777 302 SHYWGFETQGVIPDIVTMAKGIGNG-LPLGAVVTTPEIANVMAQ-------KIQFNTFGGNPVCSAGGLAVLRVIDKERR 373 (477)
Q Consensus 302 ~~~~~~~~~gv~pDivt~sK~lg~G-~pig~v~~~~~~~~~~~~-------~~~~~t~~~~~~~~aaa~a~l~~l~~~~~ 373 (477)
.+|+++++|+.||++|+||+++|| +|+|++++++++++.+.. ..|++||++||++|+|++++|++++++++
T Consensus 264 -~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~l~~~~l 342 (449)
T PRK07481 264 -SWFGSRGWGVKPDIMCLAKGITSGYVPLGATMVNARIADAFEANADFGGAIMHGYTYSGHPVACAAALATLDIVVREDL 342 (449)
T ss_pred -hhhHhhhcCCCCCEEEEeecccCCCcCceEEEEcHHHHHHHhccCccccccccCCCCCCCHHHHHHHHHHHHHHHhhhH
Confidence 799999999999999999999999 599999999999998753 25789999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCcc---HHHHHHHHHHHHHcCceeeccCCCCCEE
Q 011777 374 QAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPA---KAETAVLFEKLRELGVLVGKGGLHGNVF 450 (477)
Q Consensus 374 ~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~---~~~~~~~~~~l~~~Gv~v~~~~~~~~~i 450 (477)
++++++++++|+++|+++.++++.+.++||.|+|+++++..+...+.+. ......+.+.|+++||++.+. ++.+
T Consensus 343 ~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Glm~gi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~---g~~i 419 (449)
T PRK07481 343 PANAAKRGAYLLEGLQPLKERFELVGDVRGKGLMLALDLVADKATREPIDPSKGYANAVADVARENGVLVRPS---GTKI 419 (449)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCeEEEeecceEEEEEecccccccCCCCchhHHHHHHHHHHHhCCeEEEec---CCEE
Confidence 9999999999999999999889999999999999999997654333332 234567888999999999875 3579
Q ss_pred EEeCCCCCcHHHHHHHHHHHHHHHhhC
Q 011777 451 RIKPPMCFTKDDADFLVDALDYSMSKL 477 (477)
Q Consensus 451 Ri~p~~~~t~e~i~~~l~~l~~~l~~l 477 (477)
||+||+++|++|||+++++|+++++++
T Consensus 420 ~l~Ppl~it~~eid~~~~~l~~~l~~~ 446 (449)
T PRK07481 420 ILSPPLVIQREDVDRIVDALDAGLSAV 446 (449)
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999998753
No 13
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=7.4e-75 Score=593.47 Aligned_cols=419 Identities=30% Similarity=0.477 Sum_probs=351.8
Q ss_pred CHHHHHHHHhhhcCCCccccccCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhccc-cccc
Q 011777 56 SADQVFQKRKQFLGPSIFHYYQKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQH-ATTI 134 (477)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~-~~~~ 134 (477)
.+++++++..++.+.........|+++++|+|+||||.|||+||||.+|++++++||+||+|++|+.+|+++..+ ....
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~q~~~~~~~~~~~ 97 (459)
T PRK06931 18 TNETYLARQAEFESNVRSYPRKLPLAIAKAQGVWVTDVEGNQYLDCLAGAGTLALGHNHPDVLQSIQDVLTSGLPLHTLD 97 (459)
T ss_pred chHHHHHHHHhhhhhccccccCCCceEEeccccEEEeCCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhhccccccc
Confidence 345677776655322111111458999999999999999999999999999999999999999999999986432 2223
Q ss_pred cCChHHHHHHHHHHhhCCCCC---CEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCC
Q 011777 135 YLHHAIADFAEALASKMPGNL---KVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPI 211 (477)
Q Consensus 135 ~~~~~~~~l~~~La~~~~~~~---~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~ 211 (477)
+.++...+|+++|++.+|... ..++|+||||||+|.|||+||.+++|.+||.++++|||++.+++++++...++..+
T Consensus 98 ~~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGsEAve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~ 177 (459)
T PRK06931 98 LTTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGADAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAV 177 (459)
T ss_pred cCCHHHHHHHHHHHHhCCCccccceEEEeCCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCC
Confidence 567888999999999987532 34577799999999999999999999999999999999999999988765444333
Q ss_pred C--CCCeeeecCCCCcCCCCCCCHHHHH----HHHHHHHhc--cCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHH
Q 011777 212 P--QGEIHHVVNPDPYHGSFGSDAARYA----QDLQDHIDF--GTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRK 283 (477)
Q Consensus 212 ~--~~~~~~~~~~~~~~~~~~~~~~~~~----~~le~~i~~--~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~ 283 (477)
. .+++.+++.|+.++++++.....+. +.+++.+.. ...+++|+||+||+|+++|+++++++||++|+++|++
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~ 257 (459)
T PRK06931 178 NGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQK 257 (459)
T ss_pred CCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHH
Confidence 2 2578889999999988874322222 234444432 1346799999999999999999999999999999999
Q ss_pred hCcEEEEcCcccCccCCCCCCccccccCCCcceeeecccccCccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHH
Q 011777 284 AGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIGNGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLA 363 (477)
Q Consensus 284 ~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a 363 (477)
||+++|+|||||||||+| .+|+++++|+.|||+|+||+++||+|+|++++++++ +.+....|++||++||++|+++++
T Consensus 258 ~g~LlI~DEV~tGfGRtG-~~~a~~~~gv~PDivt~gK~l~gG~Pi~av~~~~~~-~~~~~~~~~~T~~gnpla~aaala 335 (459)
T PRK06931 258 HGILLIVDEVQAGFARTG-KMFAFEHAGIEPDIIVMSKAVGGGLPLAVLGIKKEF-DAWQPGGHTGTFRGNQLAMATGLT 335 (459)
T ss_pred cCCEEEEecchhcCCcCc-hHHHhhhcCCCCCEEEecccccCCcceeeeeeHHHH-hhccCCCCCCCCCCCHHHHHHHHH
Confidence 999999999999999999 799999999999999999999999999999988775 766656789999999999999999
Q ss_pred HHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCC-----Cc-cHHHHHHHHHHHHHcC
Q 011777 364 VLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEK-----TP-AKAETAVLFEKLRELG 437 (477)
Q Consensus 364 ~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~-----~~-~~~~~~~~~~~l~~~G 437 (477)
+|++++++++++++++++++|+++|+++.++++.+.++||.|+|+++++.++...+ .+ +......+.+.|+++|
T Consensus 336 ~L~~l~~~~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 415 (459)
T PRK06931 336 TLKILKEENLAQNAAERGEWLKAQLAELQKRYPCIGNVRGRGLMIGIEIVDERQPADAMGSYPADGELAAAIQKACFENG 415 (459)
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhCCCeEeEecCceEEEEEEccCcccccccccCCccHHHHHHHHHHHHHCC
Confidence 99999999999999999999999999999899999999999999999997643221 12 2334567888999999
Q ss_pred ceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 438 VLVGKGGLHGNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 438 v~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
|++.+.+..++++||.||+++|++|||+++++|++++++
T Consensus 416 vl~~~~~~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~ 454 (459)
T PRK06931 416 LLLERGGRNGNVVRLLPPLLITQAECEEFIDRFEQALLA 454 (459)
T ss_pred cEEeecCCCCCEEEEECCCCcCHHHHHHHHHHHHHHHHH
Confidence 999876656789999999999999999999999999864
No 14
>PRK07483 hypothetical protein; Provisional
Probab=100.00 E-value=6.5e-75 Score=591.94 Aligned_cols=399 Identities=35% Similarity=0.534 Sum_probs=345.3
Q ss_pred cCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhcccccc-ccCChHHHHHHHHHHhhCCCCC
Q 011777 77 QKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATT-IYLHHAIADFAEALASKMPGNL 155 (477)
Q Consensus 77 ~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~-~~~~~~~~~l~~~La~~~~~~~ 155 (477)
..|+++++|+|+||||.|||+||||.+|++++++||+||+|++|+++|++++.+... .+.++...+|+++|++.+|.+.
T Consensus 11 ~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~av~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~ 90 (443)
T PRK07483 11 ATLPVAVAGEGIYLIDATGKRYLDASGGAAVSCLGHSHPRVIAAIHAQIDRLAYAHTSFFTTEPAEALADRLVAAAPAGL 90 (443)
T ss_pred CCCceEEeceEEEEEeCCCCEEEEcCccHhhhccCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCC
Confidence 458999999999999999999999999999999999999999999999998764333 3568889999999999998777
Q ss_pred CEEEEeCChHHHHHHHHHHHHhc------cCCceEEEEccCccCCcccccccccCCCCCCCCC--CCCeeeecCCCCcCC
Q 011777 156 KVVYFVNSGTEANELAMLMARLS------TGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIP--QGEIHHVVNPDPYHG 227 (477)
Q Consensus 156 ~~v~~~~sGseA~~~Al~~ar~~------~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 227 (477)
++++|+||||||||.|+|+||.+ ++|.+||.|+++|||++.+++++++...++..+. ..++.+++.|..|++
T Consensus 91 ~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~ 170 (443)
T PRK07483 91 EHVYFVSGGSEAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYRE 170 (443)
T ss_pred CEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCccccc
Confidence 89999999999999999999998 6788999999999999999999987654433222 245667777766665
Q ss_pred CCCC-C----HHHHHHHHHHHHhccCCCCeeEEEecccCC-CCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCC
Q 011777 228 SFGS-D----AARYAQDLQDHIDFGTSGKVAGFIAETIQG-VGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTG 301 (477)
Q Consensus 228 ~~~~-~----~~~~~~~le~~i~~~~~~~~a~vi~epi~~-~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G 301 (477)
+... + ...+++++++++...+.+++++||+||+|| ++|+++|+++||++|+++|++||+++|+|||||||||||
T Consensus 171 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG 250 (443)
T PRK07483 171 QRAGESDEAYGQRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTG 250 (443)
T ss_pred cccCCCHHHHHHHHHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCc
Confidence 4321 1 122456777777544457899999999998 589999999999999999999999999999999999999
Q ss_pred CCCccccccCCCcceeeecccccCcc-ceEEEEeCHHHHHhhccc----ccccCCCCcHHHHHHHHHHHHhhchhhHHHH
Q 011777 302 SHYWGFETQGVIPDIVTMAKGIGNGL-PLGAVVTTPEIANVMAQK----IQFNTFGGNPVCSAGGLAVLRVIDKERRQAH 376 (477)
Q Consensus 302 ~~~~~~~~~gv~pDivt~sK~lg~G~-pig~v~~~~~~~~~~~~~----~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~ 376 (477)
++|+++++++.|||+|+||+++||+ |+|++++++++++.+... .|++||++||++|++++++|+++++++++++
T Consensus 251 -~~~a~~~~gv~PDiv~~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~l~~i~~~~l~~~ 329 (443)
T PRK07483 251 -TLFACEEDGVAPDLVTIAKGLGAGYQPIGAVLASDRIYDAIADGSGFFQHGHTYLGHATACAAALAVQRVIAEDGLLAN 329 (443)
T ss_pred -HHHHHhhcCCCCCeeeehhhhccCccccEEEEEcHHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhcCHHHH
Confidence 8999999999999999999999996 999999999999887532 4789999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCcc---HHHHHHHHHHHHHcCceeeccC-----CCCC
Q 011777 377 CADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPA---KAETAVLFEKLRELGVLVGKGG-----LHGN 448 (477)
Q Consensus 377 ~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~---~~~~~~~~~~l~~~Gv~v~~~~-----~~~~ 448 (477)
+++++++|+++|+++.++++.+.++||.|+|+++++..+..++.|. ......+.+.++++||++.+.+ ..++
T Consensus 330 ~~~~g~~l~~~L~~l~~~~~~i~~vRG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~~~~~~~~~~ 409 (443)
T PRK07483 330 VRARGEQLRARLRERLGQHPHVGDIRGRGLFVGVELVADRATKAPFDPALKLHARIKREAMARGLMVYPMGGTIDGVRGD 409 (443)
T ss_pred HHHHHHHHHHHHHHHHhcCCCeeeEeecccEEEEEEeecccccCCCCchhhHHHHHHHHHHHCCcEEEecCccccCCCCC
Confidence 9999999999999998889999999999999999998654443331 2345678899999999997653 2358
Q ss_pred EEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 449 VFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 449 ~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
++||.||+++|++|||+++++|++++++
T Consensus 410 ~l~~~PpL~it~~eid~~~~~l~~~l~~ 437 (443)
T PRK07483 410 HVLLAPPFIITAAQIDEIVERLGDAIDA 437 (443)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999864
No 15
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=4.1e-74 Score=588.03 Aligned_cols=417 Identities=27% Similarity=0.442 Sum_probs=353.8
Q ss_pred CCCHHHHHHHHhhhcCCCccc---cc-c-CceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhc
Q 011777 54 GPSADQVFQKRKQFLGPSIFH---YY-Q-KPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLL 128 (477)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~---~~-~-~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~ 128 (477)
.+.+++++++..++++..... .+ . .|+.+++|+|+||||.|||+||||.+|++++++||+||+|++|+.+|++++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~l 96 (472)
T PRK08742 17 AQTAEHWRQRDLAVLWHPCTQMREHPHTLPLVPIARGEGAWLVGHDGRRYLDAVSSWWTNLFGHAEPRIGAAIAAQAGEL 96 (472)
T ss_pred cCcHHHHHHhhhcccccCCcccccccccCCCeeEEecccCEEEeCCCCEEEEcCccHHhccCCCCCHHHHHHHHHHHHhC
Confidence 345567777766665432222 11 1 247899999999999999999999999999999999999999999999987
Q ss_pred ccccc-ccCChHHHHHHHHHHhhCCC-----CCCEEEEeCChHHHHHHHHHHHHhc------cCCceEEEEccCccCCcc
Q 011777 129 QHATT-IYLHHAIADFAEALASKMPG-----NLKVVYFVNSGTEANELAMLMARLS------TGNLGMIALRNAYHGGSS 196 (477)
Q Consensus 129 ~~~~~-~~~~~~~~~l~~~La~~~~~-----~~~~v~~~~sGseA~~~Al~~ar~~------~~~~~ii~~~~~yhG~~~ 196 (477)
.+... .+.++...+|+++|++.+|. ++++|+|++|||||||.|||+||.+ ++|.+||+++++|||++.
T Consensus 97 ~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~~~~~v~f~~sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~ 176 (472)
T PRK08742 97 EQVMLAGFTHEPAVQLAEQLLAIAPRQDGRAPLSKVFYADNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETI 176 (472)
T ss_pred CCccccccCCHHHHHHHHHHHHhCCCcccCCCCCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCch
Confidence 65443 46688899999999999875 4679999999999999999999998 568899999999999999
Q ss_pred cccccccCCCCCCCCCC--CCeeeecCCCCcCCCCCCCHH----HHHHHHHHHHhccCCCCeeEEEecc-cCCCCCeeeC
Q 011777 197 GTIGLTALNTWKYPIPQ--GEIHHVVNPDPYHGSFGSDAA----RYAQDLQDHIDFGTSGKVAGFIAET-IQGVGGAVEL 269 (477)
Q Consensus 197 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~----~~~~~le~~i~~~~~~~~a~vi~ep-i~~~~G~~~~ 269 (477)
++++.++...++..+.+ +++.+++.|+.++++++.... .+++.++++++ .+++++++||+|| +||++|+++|
T Consensus 177 gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~iAAvI~EPviqg~gG~~~~ 255 (472)
T PRK08742 177 GALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYALQAADALQALFE-QSPGEICALILEPRLQCAGGMRMH 255 (472)
T ss_pred hhhhccCCcccccccCCCCCCCEEeCCCCccccccCCCHHHHHHHHHHHHHHHHH-hCCCceEEEEEccccccCCCcccC
Confidence 99999876555443322 467788888888776654332 24567777776 2357899999999 6999999999
Q ss_pred CchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCcceeeecccccCc-cceEEEEeCHHHHHhhcc----
Q 011777 270 APGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIGNG-LPLGAVVTTPEIANVMAQ---- 344 (477)
Q Consensus 270 ~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg~G-~pig~v~~~~~~~~~~~~---- 344 (477)
+++||++|+++|++||++||+|||||||||+| .+|+++++|+.||++|+||+++|| +|+|++++++++++.+..
T Consensus 256 p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG-~~~a~e~~gv~PDiv~~gKgl~gG~~Plaav~~~~ei~~~~~~~~~~ 334 (472)
T PRK08742 256 HPAYLRRARELCDAHGAFLIADEIATGFGRTG-TLFACEQAGVMPDLLCLSKGLTGGFLPLSAVLATQQLYDAFLDDSRE 334 (472)
T ss_pred CHHHHHHHHHHHHHcCCEEEEechhhCCCCCc-cchHHHhcCCCCCEEEEcccccCCCCCcceeeccHHHHHHhhccCcc
Confidence 99999999999999999999999999999999 899999999999999999999999 599999999999987742
Q ss_pred --cccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCcc
Q 011777 345 --KIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPA 422 (477)
Q Consensus 345 --~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~ 422 (477)
..|++||++||++|+|++++|++++++++.++++++++++++.++.+ .+++.+.++||.|+|++++++.+..++.+.
T Consensus 335 ~~~~h~~T~~gnpl~~Aaa~a~L~~i~~~~l~~~~~~~g~~l~~~~~~~-~~~~~i~dvRG~Gl~~giel~~~~~~~~~~ 413 (472)
T PRK08742 335 RAFLHSHSYTGNPLACAAALATLDIFADDDVIARNQPTAARMTQLAAQI-GEHPHVADVRQAGMVVAFELTRGGNKRTPF 413 (472)
T ss_pred CccCcCCCCCccHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH-hcCCCeeeEeccceEEEEEeccCccccccC
Confidence 24789999999999999999999999999999999999999877765 568999999999999999998655444332
Q ss_pred ---HHHHHHHHHHHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 423 ---KAETAVLFEKLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 423 ---~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
......+.+.++++||++.+. +++|||.||+++|++||++++++|++++++
T Consensus 414 ~~~~~~~~~~~~~~~~~Gll~~~~---g~vi~~~PpL~it~~ei~~~~~~l~~~l~~ 467 (472)
T PRK08742 414 PPAARVGLHAYRAALARGVVLRPL---GDVLYWMPPYCVDEAQLALLADTTRHAIDE 467 (472)
T ss_pred CchhHHHHHHHHHHHHCCeEEEec---CCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 123467888999999999875 489999999999999999999999999875
No 16
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=100.00 E-value=1.5e-74 Score=585.88 Aligned_cols=395 Identities=30% Similarity=0.497 Sum_probs=338.9
Q ss_pred HHHHHHHHhhhcCCCcccccc--------C-ceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhh
Q 011777 57 ADQVFQKRKQFLGPSIFHYYQ--------K-PLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKL 127 (477)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~--------~-p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~ 127 (477)
.++.++++++++.+.. ..+. . ++.+++++|+||||.|||+||||.+|++++++||+||+|++|+.+|+++
T Consensus 28 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~l~D~dG~~ylD~~~g~~~~~lGh~hp~v~~Av~~ql~~ 106 (442)
T TIGR03372 28 NQEVIECFKEHVNPGF-LEYRKSVTAGGDYGAVEWQAGGLNTLIDTQGNEFIDCLGGFGIFNVGHRNPNVIAAVENQLAK 106 (442)
T ss_pred cHHHHHHHhhccCHHH-HHHHHhhhccCCCCeeEEEeCCeeEEEECCCCEEEECCccHHhhhcCCCCHHHHHHHHHHHHh
Confidence 3567777777765442 1111 1 2345677789999999999999999999999999999999999999998
Q ss_pred ccccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhcc---CCceEEEEccCccCCcccccccccC
Q 011777 128 LQHATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLST---GNLGMIALRNAYHGGSSGTIGLTAL 204 (477)
Q Consensus 128 ~~~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~---~~~~ii~~~~~yhG~~~~~~~~~~~ 204 (477)
+.+.+..+.++...+|+++|++.+|.+.++++|+||||||||+|+|+||.++ ||.+||+++++|||++.++++.++.
T Consensus 107 l~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~ 186 (442)
T TIGR03372 107 QPLHSQELLDPLRALLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAK 186 (442)
T ss_pred CCCcccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCC
Confidence 7765544568889999999999998877899999999999999999999996 8889999999999999999999876
Q ss_pred CCCCCCCC--CCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhc--cCCCCeeEEEecccCCCCCeeeCCchhHHHHHHH
Q 011777 205 NTWKYPIP--QGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDF--GTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDI 280 (477)
Q Consensus 205 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~--~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l 280 (477)
+.++.... .+++.++++++ .+++++.++. .+++++++||+||+++++|+++|+++||++|+++
T Consensus 187 ~~~~~~~~p~~~~~~~~p~~d-------------~~~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~l 253 (442)
T TIGR03372 187 PAFRKPFMPLLPGFHHVAFGD-------------IEAMLKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRAL 253 (442)
T ss_pred cccCCCCCCCCCCCEEeCCCC-------------HHHHHHHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHH
Confidence 55433222 24566665443 2445555532 2346899999999999999999999999999999
Q ss_pred HHHhCcEEEEcCcccCccCCCCCCccccccCCCcceeeecccccCc-cceEEEEeCHHHHHhhc--ccccccCCCCcHHH
Q 011777 281 VRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIGNG-LPLGAVVTTPEIANVMA--QKIQFNTFGGNPVC 357 (477)
Q Consensus 281 ~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg~G-~pig~v~~~~~~~~~~~--~~~~~~t~~~~~~~ 357 (477)
|++||+++|+||||+||||+| .+|+++++|+.||++||||++||| +|+|++++++++++.+. ...|++||++||++
T Consensus 254 c~~~g~llI~DEV~tG~GRtG-~~~a~e~~gv~PDivt~gK~lg~G~~Pigavv~~~~i~~~~~~~~~~~~~T~~gnp~~ 332 (442)
T TIGR03372 254 CDEFGALLILDEVQTGMGRTG-KMFACEHEGVQPDILCLAKALGGGVMPIGATIATEAVFSVLFDNPFLHTTTFGGNPLA 332 (442)
T ss_pred HHHcCCEEEEeecccCCCccc-cchhhhhcCCCCCeeeehhhhcCCcccceEEEecHHHHHhhhccCccccCCCCCCHHH
Confidence 999999999999999999999 799999999999999999999999 79999999999998884 33688999999999
Q ss_pred HHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCC-CceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHc
Q 011777 358 SAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHD-IIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLREL 436 (477)
Q Consensus 358 ~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~-~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~ 436 (477)
|+|++++|++++++++.+++++++++++++|+++..+++ .+.++||.|+|+++++.++ .....+.+.|+++
T Consensus 333 ~Aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~~~~~~~i~~vRG~Gl~~giel~~~--------~~~~~i~~~l~~~ 404 (442)
T TIGR03372 333 CAAALATINELLEKNLPAQAAIKGDFLLDGFQQLAAEYPDLIIEARGKGLLMAIEFRDN--------EIGYAFAKELFQQ 404 (442)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecceEEEEEEeCCh--------HHHHHHHHHHHHC
Confidence 999999999999999999999999999999999998898 7899999999999999642 2346788999999
Q ss_pred CceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHHH
Q 011777 437 GVLVGKGGLHGNVFRIKPPMCFTKDDADFLVDALDYSM 474 (477)
Q Consensus 437 Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l 474 (477)
||++.+.+..++++||.||+++|++|+|+++++|++++
T Consensus 405 Gvl~~~~~~~~~~lr~~Ppl~~t~~~id~~~~~l~~~~ 442 (442)
T TIGR03372 405 NILVAGTLNNAKSIRIEPPLTITIEQCALVIKAAKDAL 442 (442)
T ss_pred CcEEeecCCCCCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence 99998654446899999999999999999999999864
No 17
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=7.1e-74 Score=585.31 Aligned_cols=411 Identities=27% Similarity=0.434 Sum_probs=349.5
Q ss_pred HHHHHHHHhhhcCCCccc--cc--cCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccc
Q 011777 57 ADQVFQKRKQFLGPSIFH--YY--QKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHAT 132 (477)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~--~~--~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~ 132 (477)
.+++.++.+++++..... .+ ..|+++++|+|+||||.|||+||||.+|++++++||+||+|++|+.+|++++.+..
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~ 90 (453)
T PRK06943 11 TDDWVARSLRAVWHPCTQMKHHERLPLLPVARGEGAWLYDRDGRRYLDAISSWWVNLFGHANPRINAALKDQLDTLEHAM 90 (453)
T ss_pred hhhHHHHhhcccccCCcCccccccCCCceEEecccCEEEeCCCCEEEEcchHHHHhcCCCCCHHHHHHHHHHHHhcCCcc
Confidence 355666666664322211 11 24899999999999999999999999999999999999999999999999876644
Q ss_pred c-ccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhc------cCCceEEEEccCccCCcccccccccCC
Q 011777 133 T-IYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLS------TGNLGMIALRNAYHGGSSGTIGLTALN 205 (477)
Q Consensus 133 ~-~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~------~~~~~ii~~~~~yhG~~~~~~~~~~~~ 205 (477)
. .+.++...+|+++|++..|...++|+|++|||||||.|+|+||.+ ++|.+||+++++|||++.+++++++..
T Consensus 91 ~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGseAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~ 170 (453)
T PRK06943 91 LAGCTHEPAIELAERLAALTGGTLGHAFFASDGASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVA 170 (453)
T ss_pred ccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCCh
Confidence 3 456888999999999999876789999999999999999999764 568899999999999999999999866
Q ss_pred CCCCCCCC--CCeeeecCCCCcCCCCCCCH----HHHHHHHHHHHhccCCCCeeEEEecc-cCCCCCeeeCCchhHHHHH
Q 011777 206 TWKYPIPQ--GEIHHVVNPDPYHGSFGSDA----ARYAQDLQDHIDFGTSGKVAGFIAET-IQGVGGAVELAPGYLKLVY 278 (477)
Q Consensus 206 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~----~~~~~~le~~i~~~~~~~~a~vi~ep-i~~~~G~~~~~~~~l~~l~ 278 (477)
.++..+.+ .++..++.|+.++.++.... ..++++++++++. +++++++||+|| +||++|+++++++||++|+
T Consensus 171 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr 249 (453)
T PRK06943 171 LFKDAYDPLIRHAHVVASPDARGARPGETAADVAARALADVRRLFAE-RAGKIAALIVEPLVQCAAGMAMHDPSYLRGLR 249 (453)
T ss_pred hhhcccccCCCCCEEECCCCccccccCCCHHHHHHHHHHHHHHHHHh-CCCceEEEEEeccccccCCcccCCHHHHHHHH
Confidence 55543322 45667777776665554322 2345777877763 457899999999 5999999999999999999
Q ss_pred HHHHHhCcEEEEcCcccCccCCCCCCccccccCCCcceeeecccccCc-cceEEEEeCHHHHHhhcc------cccccCC
Q 011777 279 DIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIGNG-LPLGAVVTTPEIANVMAQ------KIQFNTF 351 (477)
Q Consensus 279 ~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg~G-~pig~v~~~~~~~~~~~~------~~~~~t~ 351 (477)
++|++||+++|+|||||||||+| ++|+++++|+.||++|+||+++|| +|+|++++++++++.+.. ..|++||
T Consensus 250 ~lc~~~gillI~DEV~TG~GRtG-~~fa~~~~gv~PDivt~gKgl~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~T~ 328 (453)
T PRK06943 250 ALCDRYGVHLIADEIAVGCGRTG-TFFACEQAGVWPDFLCLSKGISGGYLPLSLVLSRDAIFAAFYDDDVTRGFLHSHSY 328 (453)
T ss_pred HHHHHcCCEEEeechhhCCCCCc-chhHHHhCCCCCCeEeeehhhccCcccceEEEEcHHHHHhhcccCccCCccCCCCC
Confidence 99999999999999999999999 899999999999999999999999 599999999999988753 2478999
Q ss_pred CCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHH
Q 011777 352 GGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFE 431 (477)
Q Consensus 352 ~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~ 431 (477)
++||++|++++++|++++++++++++++++++|+++|+++. +++.+.++||.|+|+++++..+. .+.......+.+
T Consensus 329 ~gnpl~~aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~-~~~~v~~vrG~Gl~~gvel~~~~---~~~~~~~~~i~~ 404 (453)
T PRK06943 329 TGNPLACRAALATLDLFAEDDVLARNARKSARLRAALAPLA-AHPQVRHLRQRGTIFAFDVALDG---DAARTFSRRFFE 404 (453)
T ss_pred CCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHh-cCCCEEeEeccccEEEEEEccCC---CcchHHHHHHHH
Confidence 99999999999999999999999999999999999999985 57888899999999999997432 223334567889
Q ss_pred HHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 432 KLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 432 ~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
.++++||++.+. ++.+||+||+++|++|||+++++|++++++
T Consensus 405 ~~~~~Gll~~~~---g~~l~~~Ppl~it~~eid~~~~~l~~al~~ 446 (453)
T PRK06943 405 AALERELLLRPI---GTTVYLMPPYVLDDDEIAWLAERTRATLDA 446 (453)
T ss_pred HHHHCCcEEEec---CCEEEEeCCCcCCHHHHHHHHHHHHHHHHH
Confidence 999999999865 468999999999999999999999999875
No 18
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1.4e-73 Score=584.69 Aligned_cols=416 Identities=31% Similarity=0.484 Sum_probs=357.2
Q ss_pred CHHHHHHHHhhhcCCCcc--ccc--cCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhcccc
Q 011777 56 SADQVFQKRKQFLGPSIF--HYY--QKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHA 131 (477)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~--~~~--~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~ 131 (477)
+++++++++.++++.... ..+ ..|+++++|+|+||||.|||+||||.+|++++++||+||+|++|+.+|++++.+.
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~ 91 (460)
T PRK06916 12 TYEELSEKNKAYVWHPFTQMKDYLEEDPLIIERGEGRKLYDVNGNEYYDGVSSIWLNVHGHQVPELDEAIREQLNKIAHS 91 (460)
T ss_pred ChHHHHHHHhhccccccccccccccCCCeeEEeccccEEEeCCCCEEEEcchhHHHhhcCCCCHHHHHHHHHHHHhCCCc
Confidence 346788887777653322 112 4589999999999999999999999999999999999999999999999987665
Q ss_pred cc-ccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhc------cCCceEEEEccCccCCcccccccccC
Q 011777 132 TT-IYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLS------TGNLGMIALRNAYHGGSSGTIGLTAL 204 (477)
Q Consensus 132 ~~-~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~------~~~~~ii~~~~~yhG~~~~~~~~~~~ 204 (477)
.. .+.++...+|+++|++.+|..+++++|+||||||||.|+|+||.+ ++|.+||.|+++|||.+.+++++++.
T Consensus 92 ~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~ 171 (460)
T PRK06916 92 TLLGLANVPSILLAEKLIEVVPEGLKKVFYSDSGATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAI 171 (460)
T ss_pred cccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCC
Confidence 43 356888999999999999877789999999999999999999984 67899999999999999999999876
Q ss_pred CCCCCCCCC--CCeeeecCCCCcCCCCCCCHH----HHHHHHHHHHhccCCCCeeEEEecc-cCCCCCeeeCCchhHHHH
Q 011777 205 NTWKYPIPQ--GEIHHVVNPDPYHGSFGSDAA----RYAQDLQDHIDFGTSGKVAGFIAET-IQGVGGAVELAPGYLKLV 277 (477)
Q Consensus 205 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~----~~~~~le~~i~~~~~~~~a~vi~ep-i~~~~G~~~~~~~~l~~l 277 (477)
..++..+.+ .++..++.|+.++++++.+.. .++++++++++ .+++++|+||+|| +|+++|+++|+++||++|
T Consensus 172 ~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~l 250 (460)
T PRK06916 172 DLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLK-EKHEEIAAIIVEPLVQGAGGMITMPKGYLKGL 250 (460)
T ss_pred cccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHH-hCCCcEEEEEEeccccCCCCcccCCHHHHHHH
Confidence 555433322 467778888878776653332 34667777776 3457899999999 799999999999999999
Q ss_pred HHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCcceeeecccccCc-cceEEEEeCHHHHHhhcc-------ccccc
Q 011777 278 YDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIGNG-LPLGAVVTTPEIANVMAQ-------KIQFN 349 (477)
Q Consensus 278 ~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg~G-~pig~v~~~~~~~~~~~~-------~~~~~ 349 (477)
+++|++||+++|+|||||||||+| ++|+++++|+.||++|+||+++|| +|+|++++++++++.+.. ..|++
T Consensus 251 r~lc~~~g~llI~DEV~TG~GRtG-~~~a~~~~gv~PDiv~~gK~l~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~~ 329 (460)
T PRK06916 251 RNLCTKYNVLFITDEVATGFGRTG-KMFACEHENVTPDIMTAGKGLTGGYLPIAITVTTDEIYNAFYGDYEEQKTFFHGH 329 (460)
T ss_pred HHHHHHcCCEEEeechhhCCCcCc-hhhHHHhcCCCCCeeeeehhhhcCccccceeeecHHHHHHhhccccccCccccCC
Confidence 999999999999999999999999 799999999999999999999999 599999999999987642 34788
Q ss_pred CCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCcc---HHHH
Q 011777 350 TFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPA---KAET 426 (477)
Q Consensus 350 t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~---~~~~ 426 (477)
||++||++|++++++|+++++++++++++++++++++.|+++.+ ++.+.++||.|+|+++++..+...+++. ....
T Consensus 330 T~~gnpl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~l~~l~~-~~~v~~vrG~Glm~giel~~~~~~~~~~~~~~~~~ 408 (460)
T PRK06916 330 SYTGNPLGCAVALANLELYEKTNLIEQVARKTEYVATQLEDLFA-LKHVGDIRQLGLMVGIELVKNKETKEPFEWTERVG 408 (460)
T ss_pred CCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhc-CCCeEEeecCCceeeEEeecccccccCCCchhhHH
Confidence 99999999999999999999999999999999999999999864 8889999999999999998654444332 1234
Q ss_pred HHHHHHHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHHHhhC
Q 011777 427 AVLFEKLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADFLVDALDYSMSKL 477 (477)
Q Consensus 427 ~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~l 477 (477)
..+.+.|+++||++.+. ++++||.||+++|++||++++++|+++++++
T Consensus 409 ~~i~~~~~~~Gvl~~~~---g~~l~~~Ppl~it~~~id~~~~~l~~~l~~~ 456 (460)
T PRK06916 409 VQVCKRSRELGMLTRPL---GNTIVFMPPLASTIDELDEMLRILYKAISDV 456 (460)
T ss_pred HHHHHHHHHCCeEEEec---CCEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 67889999999999875 4799999999999999999999999998753
No 19
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1.2e-73 Score=584.87 Aligned_cols=392 Identities=26% Similarity=0.452 Sum_probs=343.3
Q ss_pred ceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhcccccc-ccCChHHHHHHHHHHhhCCCCCCE
Q 011777 79 PLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATT-IYLHHAIADFAEALASKMPGNLKV 157 (477)
Q Consensus 79 p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~-~~~~~~~~~l~~~La~~~~~~~~~ 157 (477)
|+++++|+|+||||.|||+||||.+|+++.++||+||+|++|+.+|++++.+... .+.++...+|+++|++.+|.+.++
T Consensus 30 ~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~~lae~L~~~~p~~~~~ 109 (466)
T PRK07030 30 LIPIRRGEGVWLEDFEGKRYLDAVSSWWVNVFGHANPRINQRIKDQVDQLEHVILAGFSHEPVIELSERLVKITPPGLSR 109 (466)
T ss_pred CceEEeeeccEEEECCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHHhCCCCcCE
Confidence 4689999999999999999999999999999999999999999999998766543 467888999999999999877789
Q ss_pred EEEeCChHHHHHHHHHHHHhc------cCCceEEEEccCccCCcccccccccCCCCCCCCCC--CCeeeecCCCCcCCCC
Q 011777 158 VYFVNSGTEANELAMLMARLS------TGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQ--GEIHHVVNPDPYHGSF 229 (477)
Q Consensus 158 v~~~~sGseA~~~Al~~ar~~------~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 229 (477)
|+|+||||||||.|+|+||.+ ++|.+||+++++|||++.+++++++...++..+.+ .++.+++.|+.+++++
T Consensus 110 v~f~~sGsEAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~ 189 (466)
T PRK07030 110 CFYADNGSSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPE 189 (466)
T ss_pred EEEeCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCcccccc
Confidence 999999999999999999887 57889999999999999999998876544433222 4677788888777765
Q ss_pred CCCHH----HHHHHHHHHHhccCCCCeeEEEecc-cCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCC
Q 011777 230 GSDAA----RYAQDLQDHIDFGTSGKVAGFIAET-IQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHY 304 (477)
Q Consensus 230 ~~~~~----~~~~~le~~i~~~~~~~~a~vi~ep-i~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~ 304 (477)
+.... .+++++++++. .+++++|+||+|| +|+++|+++++++||++|+++|++||+++|+|||||||||+| .+
T Consensus 190 ~~~~~~~~~~~l~~le~~~~-~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG-~~ 267 (466)
T PRK07030 190 GMSWEEHSRRMFAHMEQTLA-EHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTG-TM 267 (466)
T ss_pred CCCHHHHHHHHHHHHHHHHH-hCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccc-cc
Confidence 54332 24567788776 3457899999999 799999999999999999999999999999999999999999 79
Q ss_pred ccccccCCCcceeeecccccCc-cceEEEEeCHHHHHhhcc-------cccccCCCCcHHHHHHHHHHHHhhchhhHHHH
Q 011777 305 WGFETQGVIPDIVTMAKGIGNG-LPLGAVVTTPEIANVMAQ-------KIQFNTFGGNPVCSAGGLAVLRVIDKERRQAH 376 (477)
Q Consensus 305 ~~~~~~gv~pDivt~sK~lg~G-~pig~v~~~~~~~~~~~~-------~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~ 376 (477)
|+++++|+.||++|++|+++|| +|+|++++++++++.+.. ..|++||++||++|++++++|+++++++++++
T Consensus 268 ~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~~i~~~~l~~~ 347 (466)
T PRK07030 268 FACEQAGIRPDFLCLSKALTGGYLPLAAVLTTDTVYQAFYDDYPTLRAFLHSHSYTGNPLACAAALATLDIFEQDNVIEN 347 (466)
T ss_pred hHHHhcCCCCCEEeeehhccCCcccceEEEecHHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhcCHHHH
Confidence 9999999999999999999999 599999999999988742 25889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCcc---HHHHHHHHHHHHHcCceeeccCCCCCEEEEe
Q 011777 377 CADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPA---KAETAVLFEKLRELGVLVGKGGLHGNVFRIK 453 (477)
Q Consensus 377 ~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~---~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~ 453 (477)
+++++++|+++|+++. +++.+.++||.|+|+++++..+...+.|. ......+.+.++++||++.+. ++++||.
T Consensus 348 ~~~~G~~l~~~L~~l~-~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~---g~~i~~~ 423 (466)
T PRK07030 348 NRALARRMAEATAHLA-DHPHVAEVRQTGMILAIEMVQDKASKTPYPWQERRGLKVYQHALERGALLRPL---GSVVYFL 423 (466)
T ss_pred HHHHHHHHHHHHHHHh-cCCCEEEeEeceeEEEEEeccCccccccCcchhHHHHHHHHHHHHCCeEEEec---CCEEEEE
Confidence 9999999999999985 68899999999999999998654433332 122457888999999999864 4789999
Q ss_pred CCCCCcHHHHHHHHHHHHHHHhh
Q 011777 454 PPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 454 p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
||+++|++||++++++|++++++
T Consensus 424 Ppl~it~~eid~~~~~l~~al~~ 446 (466)
T PRK07030 424 PPYVITPEQIDFLAEVASEGIDI 446 (466)
T ss_pred CCccCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999875
No 20
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=3.3e-73 Score=581.32 Aligned_cols=418 Identities=25% Similarity=0.421 Sum_probs=356.0
Q ss_pred CCCCCCCHHHHHHHHhhhcCCCccccccCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhcc
Q 011777 50 KPYTGPSADQVFQKRKQFLGPSIFHYYQKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQ 129 (477)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~ 129 (477)
.++++|++++++++..+++..... ....|+++++|+|+||||.|||+||||++ .+++++||+||+|++|+.+|++++.
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~a~G~~l~D~dG~~ylD~~g-~~~~~lGh~~p~v~~Ai~~ql~~~~ 104 (459)
T PRK06082 27 ASMNDERTQALLKRDSEVFLHQAM-STPCLDVLASAEGIYIEDVDGKKYMDFHG-NNVHQLGYGHPHVIEKVKEQMAKLP 104 (459)
T ss_pred ccCCCcchHHHHHHHHHHhccccc-CCCCCceEEeeeeeEEEECCCCEEEEccc-HhhcccCCCCHHHHHHHHHHHHhCC
Confidence 345666777776655554432211 12337899999999999999999999974 4889999999999999999999877
Q ss_pred ccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCC
Q 011777 130 HATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKY 209 (477)
Q Consensus 130 ~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~ 209 (477)
+....+.++...+|+++|++.+|...++++|++||+||+++|+|+||.+++|.+||+|+++|||++.+++++++...++.
T Consensus 105 ~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~ 184 (459)
T PRK06082 105 FSPRRFTNETAIECAEKLTEIAGGELNRVLFAPGGTSAIGMALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQ 184 (459)
T ss_pred CccCccCCHHHHHHHHHHHHhCCCCCCEEEECCCcHHHHHHHHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCccccc
Confidence 65555678999999999999998767899999999999999999999999999999999999999999998887655443
Q ss_pred CCC--CCCeeeecCCCCcCCCCCCCH---HHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHh
Q 011777 210 PIP--QGEIHHVVNPDPYHGSFGSDA---ARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKA 284 (477)
Q Consensus 210 ~~~--~~~~~~~~~~~~~~~~~~~~~---~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~ 284 (477)
.+. .+++..++.|+.+++++++++ ..++++++++++. .+++++||+||++|++ .++|+++||++|+++|++|
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~--~~~vAavIvEPv~g~g-~~~~~~~yl~~lr~lc~~~ 261 (459)
T PRK06082 185 GMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEK--EGGIGAFIAEAVRNTD-VQVPSKAYWKRVREICDKH 261 (459)
T ss_pred CCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhc--CCCEEEEEECCccCCC-CcCCCHHHHHHHHHHHHHc
Confidence 322 257888888888888776432 2356778888763 3579999999999985 6788999999999999999
Q ss_pred CcEEEEcCcccCccCCCCCCccccccCCCcceeeecccccCc-cceEEEEeCHHHHHhhccc-ccccCCCCcHHHHHHHH
Q 011777 285 GGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIGNG-LPLGAVVTTPEIANVMAQK-IQFNTFGGNPVCSAGGL 362 (477)
Q Consensus 285 gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg~G-~pig~v~~~~~~~~~~~~~-~~~~t~~~~~~~~aaa~ 362 (477)
|+++|+||||+||||+| .+|+++++|+.||++|+||+++|| +|+|++++++++++.+... .+ +||++||++|++++
T Consensus 262 g~llI~DEV~tG~GRtG-~~fa~e~~gv~PDiv~~gKgl~gG~~P~~av~~~~~i~~~~~~~~~~-~T~~gnpl~~aaa~ 339 (459)
T PRK06082 262 NVLLIIDEIPNGMGRTG-EWFTHQAYGIEPDILCIGKGLGGGLVPIAAMITKDKYNTAAQISLGH-YTHEKSPLGCAAAL 339 (459)
T ss_pred CCEEEEechhhCCCccc-hhhHhHhhCCCCCEEEecccccCCCCcceEEEEcHHHHhhccCCCCC-CCCCcCHHHHHHHH
Confidence 99999999999999999 799999999999999999999999 5999999999988655322 34 79999999999999
Q ss_pred HHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeec
Q 011777 363 AVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGK 442 (477)
Q Consensus 363 a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~ 442 (477)
++|++++++++.+++++++++|+++|+++.++++.+.++||.|+|+++++..+...+.+.......+...++++||++.+
T Consensus 340 a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~ 419 (459)
T PRK06082 340 ATIEVIEQEGLLEKVKADSQFMRERLLEMKAKYPLIGDVRGIGLLWGVELVTDRHTKERAYDEAEAVLYRCLNNGLSFKV 419 (459)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeeccceeEEEEccCccccCccHHHHHHHHHHHHhCCCEEEe
Confidence 99999988899999999999999999999999999999999999999999865444444444567788899999999987
Q ss_pred cCCCCCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 443 GGLHGNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 443 ~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
.+ ++++||+||+++|++|||++++++++++.+
T Consensus 420 ~~--~~~i~~~Ppl~it~~eid~~~~~l~~~l~~ 451 (459)
T PRK06082 420 SQ--GNVIQLSPPLIITREELTQALAILEEAIAK 451 (459)
T ss_pred cC--CCEEEEeCCCccCHHHHHHHHHHHHHHHHH
Confidence 53 689999999999999999999999999865
No 21
>PRK06148 hypothetical protein; Provisional
Probab=100.00 E-value=2.6e-73 Score=628.73 Aligned_cols=418 Identities=46% Similarity=0.757 Sum_probs=366.5
Q ss_pred CHHHHHHHHhhhcCCCccccccCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhcccccccc
Q 011777 56 SADQVFQKRKQFLGPSIFHYYQKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIY 135 (477)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~ 135 (477)
+..++++++++++.+.....|..|+.+++|+|+||||.|||+||||.+|+ .++||+||+|++|+.+|++++.. ...+
T Consensus 584 ~~~~~~~~~~~~~~~~~~~~~~~p~~i~~g~G~~l~D~dG~~ylD~~~g~--~~lGH~hp~v~~Ai~~q~~~l~~-~~~~ 660 (1013)
T PRK06148 584 DKAEILRERKEHLLPNLSISYSDPIKFVRGWGVWLIDNRGRAYLDCFNNV--CHVGHAHPRVVAAAARQAARLNT-NTRY 660 (1013)
T ss_pred CHHHHHHHHHHhcCcccccccCCCceEEEeeecEEEECCCCEEEEcccCh--hhcCCCCHHHHHHHHHHHhhcCC-cCCc
Confidence 34566777778887776666788999999999999999999999999985 68999999999999999998633 2356
Q ss_pred CChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCC--CC
Q 011777 136 LHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPI--PQ 213 (477)
Q Consensus 136 ~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~--~~ 213 (477)
.++...+|+++|++.+|.+.++++|+|||||||++|||+||.+|||.+||+++++|||++.+++++++........ ..
T Consensus 661 ~~~~~~~lAe~L~~~~p~~~~~v~f~nSGsEA~e~AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~ 740 (1013)
T PRK06148 661 LHDAIVAYAERLTATLPDGLTVAFFVNSGSEANSLALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRP 740 (1013)
T ss_pred CCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCC
Confidence 7899999999999999877889999999999999999999999999999999999999999999987632211111 12
Q ss_pred CCeeeecCCCCcCCCCCCCH----HHHHHHHHHHHhc--cCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcE
Q 011777 214 GEIHHVVNPDPYHGSFGSDA----ARYAQDLQDHIDF--GTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGV 287 (477)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~----~~~~~~le~~i~~--~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gil 287 (477)
.++..++.|++++++|+.+. ..+.++++++++. .+++++|+||+||++|++|+++++++||++|+++|++||++
T Consensus 741 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~l 820 (1013)
T PRK06148 741 DHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGV 820 (1013)
T ss_pred CCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCE
Confidence 45667788888888887432 2355667777652 23468999999999999999999999999999999999999
Q ss_pred EEEcCcccCccCCCCCCccccccCCCcceeeecccccCccceEEEEeCHHHHHhhccc-ccccCCCCcHHHHHHHHHHHH
Q 011777 288 CIADEVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIGNGLPLGAVVTTPEIANVMAQK-IQFNTFGGNPVCSAGGLAVLR 366 (477)
Q Consensus 288 lI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pig~v~~~~~~~~~~~~~-~~~~t~~~~~~~~aaa~a~l~ 366 (477)
+|+|||||||||+|..+|+++++|+.|||+|+||++|||+|+|++++++++++.+... .+++||++||++|+|++++|+
T Consensus 821 lI~DEVqtGfGRtG~~~~a~e~~gv~PDivt~gK~lggG~Plgav~~~~ei~~~~~~g~~~~~Tf~gnpla~aaa~a~L~ 900 (1013)
T PRK06148 821 CIADEVQVGFGRVGSHWWAFETQGVVPDIVTMGKPIGNGHPMGAVVTTREIADSFDNGMEYFNTFGGNPVSCAIGLAVLD 900 (1013)
T ss_pred EEEEecccCCCCCCCcchhhhhcCCCcceeeecccccCCcceEEEEEcHHHHhhccCCCccccCCCCCHHHHHHHHHHHH
Confidence 9999999999999944899999999999999999999999999999999999988654 378999999999999999999
Q ss_pred hhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCC
Q 011777 367 VIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLH 446 (477)
Q Consensus 367 ~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~ 446 (477)
+++++++++++++++++|+++|+++.++++.+.++||.|+|+++++..+..++.|+......+.+.|+++||++.+.+..
T Consensus 901 ~i~~e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g~~ 980 (1013)
T PRK06148 901 IIEDEDLQRNALEIGNYLLAGLRELQDRFDIIGDVRGMGLFLGIELVTDRKTKAPATAIARYVKNGARERGILIGTEGPH 980 (1013)
T ss_pred HHhhccHHHHHHHHHHHHHHHHHHHHHhCCCceEEeeeceEEEEEecCCccccCccHHHHHHHHHHHHhCCeEEeccCCC
Confidence 99999999999999999999999999999999999999999999998765556666666778999999999999887666
Q ss_pred CCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 447 GNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 447 ~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
++++||.||+++|++|||+++++|++++++
T Consensus 981 ~~vlr~~Ppl~it~~~id~~l~~l~~~l~~ 1010 (1013)
T PRK06148 981 DNVLKIRPPLIFSRADADHLLEVLDDVLAA 1010 (1013)
T ss_pred CCEEEEeCCccCCHHHHHHHHHHHHHHHHH
Confidence 799999999999999999999999999875
No 22
>PRK07480 putative aminotransferase; Validated
Probab=100.00 E-value=2.2e-73 Score=582.21 Aligned_cols=414 Identities=29% Similarity=0.408 Sum_probs=348.7
Q ss_pred HHHHHHHhhhcCCCccc---cc-cCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhcccccc
Q 011777 58 DQVFQKRKQFLGPSIFH---YY-QKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATT 133 (477)
Q Consensus 58 ~~~~~~~~~~~~~~~~~---~~-~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~ 133 (477)
.++.++..++++..... +. ..|+++++|+|+||||.|||+||||.+|++++++||+||+|++|+++|++++.+...
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~ 87 (456)
T PRK07480 8 AELQALDAAHHLHPFSDMKALNEKGSRVITRAEGVYLWDSEGNKILDGMAGLWCVNVGYGRKELADAAARQMRELPYYNT 87 (456)
T ss_pred HHHHhhhhcccccCcccccccccCCCceEEeceeeEEEeCCCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCccc
Confidence 45555555554332211 11 247899999999999999999999999999999999999999999999998765433
Q ss_pred --ccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhc------cCCceEEEEccCccCCcccccccccCC
Q 011777 134 --IYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLS------TGNLGMIALRNAYHGGSSGTIGLTALN 205 (477)
Q Consensus 134 --~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~------~~~~~ii~~~~~yhG~~~~~~~~~~~~ 205 (477)
.+.++...+|+++|++.+|.+.++|+|++|||||+|.|+|+||.+ ++|.+||.++++|||++.+++++++..
T Consensus 88 ~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~ 167 (456)
T PRK07480 88 FFKTTHPPAIELAAKLAEVAPPGFNHVFFTNSGSEANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMK 167 (456)
T ss_pred ccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCCh
Confidence 357889999999999999877889999999999999999999998 568889999999999999999988755
Q ss_pred CCCCCCC--CCCeeeecCCCCcCCCCCCCHHH----HHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHH
Q 011777 206 TWKYPIP--QGEIHHVVNPDPYHGSFGSDAAR----YAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYD 279 (477)
Q Consensus 206 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~----~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~ 279 (477)
.++.... .+++.+++.|..++++++.+... +.+.+++.+....++++++||+||+|+++|+++++++||++|++
T Consensus 168 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~ 247 (456)
T PRK07480 168 YMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQR 247 (456)
T ss_pred hhhcccCCCCCCCeecCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHH
Confidence 4333222 35677888888888766433322 24666655543445789999999999999999999999999999
Q ss_pred HHHHhCcEEEEcCcccCccCCCCCCccccccCCCcceeeecccccCc-cceEEEEeCHHHHHhhc--c--cccccCCCCc
Q 011777 280 IVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIGNG-LPLGAVVTTPEIANVMA--Q--KIQFNTFGGN 354 (477)
Q Consensus 280 l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg~G-~pig~v~~~~~~~~~~~--~--~~~~~t~~~~ 354 (477)
+|++||+++|+|||||||||+| ++|+++++|+.||++||||+++|| +|+|++++++++++.+. . ..|++||++|
T Consensus 248 lc~~~g~llI~DEV~tGfGRtG-~~~a~~~~gv~PDiv~~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~T~~gn 326 (456)
T PRK07480 248 ICRKYDILLVADEVICGFGRTG-EWFGSQHFGIKPDLMTIAKGLTSGYIPMGAVGVGDRVAEVLIEEGGEFNHGFTYSGH 326 (456)
T ss_pred HHHHcCCEEEEechhhCCCcCc-chhhhhhcCCCCCeeeeehhhccCCccceEEEEcHHHHHHHhcCCCCcccCCCCCcC
Confidence 9999999999999999999999 899999999999999999999999 49999999999999883 2 2578999999
Q ss_pred HHHHHHHHHHHHhhchhhHHHHH-HHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCcc---HHHHHHHH
Q 011777 355 PVCSAGGLAVLRVIDKERRQAHC-ADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPA---KAETAVLF 430 (477)
Q Consensus 355 ~~~~aaa~a~l~~l~~~~~~~~~-~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~---~~~~~~~~ 430 (477)
|++|+|++++|++++++++.+++ ++++++|+++|+++ .+++.+.++||.|+|++++++.+...+.+. ......+.
T Consensus 327 pl~~Aaa~a~L~~l~~~~l~~~~~~~~g~~l~~~l~~l-~~~~~i~~vrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~ 405 (456)
T PRK07480 327 PVAAAVALANLRILRDEGIVERVRDDTGPYLQKRLREL-ADHPLVGEVRGVGLVGAIELVKDKATRERFEAGGGVGTICR 405 (456)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHh-hcCCCeeeEEeecceEEEEEeccccccccCcchhhHHHHHH
Confidence 99999999999999999999999 69999999999996 578999999999999999997654333331 11235677
Q ss_pred HHHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 431 EKLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 431 ~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
+.|+++||++.+. ++.+||+||+++|++|||+++++|++++.+
T Consensus 406 ~~~~~~Gll~~~~---~~~l~~~Ppl~it~~eid~~~~~l~~al~~ 448 (456)
T PRK07480 406 DHCFANGLIMRAV---GDRMIISPPLVITHAEIDELVEKARKALDA 448 (456)
T ss_pred HHHHHCCcEEeec---CCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 8899999999764 478999999999999999999999999864
No 23
>PRK07036 hypothetical protein; Provisional
Probab=100.00 E-value=3.9e-73 Score=581.85 Aligned_cols=413 Identities=31% Similarity=0.485 Sum_probs=350.9
Q ss_pred HHHHHHhhhcCCCcccc----ccCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccc
Q 011777 59 QVFQKRKQFLGPSIFHY----YQKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTI 134 (477)
Q Consensus 59 ~~~~~~~~~~~~~~~~~----~~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~ 134 (477)
++++..+++++...... ...|+.+++|+|+||||.|||+||||.+|++++++||+||+|++|+.+|++++.+....
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~ 89 (466)
T PRK07036 10 ALAQADKRHLLHPWHDFSSLGKEGSLVIVEAEGIYVTDADGRRYLDGIGGMWCVNVGYGREEMADAIADQARRLPYYTPF 89 (466)
T ss_pred HHHHHhhcccccCccCccccccCCCceEEeCceeEEEECCCCEEEECcccHHhhcCCCCCHHHHHHHHHHHHhCcccccc
Confidence 34455556654332211 12489999999999999999999999999999999999999999999999987654432
Q ss_pred --cCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhc------cCCceEEEEccCccCCcccccccccCCC
Q 011777 135 --YLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLS------TGNLGMIALRNAYHGGSSGTIGLTALNT 206 (477)
Q Consensus 135 --~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~------~~~~~ii~~~~~yhG~~~~~~~~~~~~~ 206 (477)
+.++...+|+++|++..|.+.++|+|+||||||||.|+|+||.+ ++|.+||.++++|||++.+++++++...
T Consensus 90 ~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~ 169 (466)
T PRK07036 90 GDMTNAPAAELAAKLAELAPGDLNHVFLTTGGSTAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAA 169 (466)
T ss_pred cccCCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCc
Confidence 56888999999999999887889999999999999999999988 4578999999999999999999887655
Q ss_pred CCCCCCC--CCeeeecCCCCcCCCCCCCHHH----HHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHH
Q 011777 207 WKYPIPQ--GEIHHVVNPDPYHGSFGSDAAR----YAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDI 280 (477)
Q Consensus 207 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~----~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l 280 (477)
++..+.+ .++.+++.|++++++.+..... +.+++++.+...+++++|+||+||+++++|+++|+++||++|+++
T Consensus 170 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~l 249 (466)
T PRK07036 170 DRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREI 249 (466)
T ss_pred ccccccCCCCCcEEecCCcccccccCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHH
Confidence 4433322 4677788888877766543222 345677777644567899999999999999999999999999999
Q ss_pred HHHhCcEEEEcCcccCccCCCCCCcccc-ccCCCcceeeecccccCc-cceEEEEeCHHHHHhhcc-------cccccCC
Q 011777 281 VRKAGGVCIADEVQTGFGRTGSHYWGFE-TQGVIPDIVTMAKGIGNG-LPLGAVVTTPEIANVMAQ-------KIQFNTF 351 (477)
Q Consensus 281 ~~~~gillI~DEv~~gfgr~G~~~~~~~-~~gv~pDivt~sK~lg~G-~pig~v~~~~~~~~~~~~-------~~~~~t~ 351 (477)
|++||+++|+|||||||||+| ++|+++ ++|+.|||+|+||+++|| +|+|++++++++++.+.. ..+++||
T Consensus 250 c~~~g~llI~DEV~tGfGRtG-~~~~~~~~~gv~PDivt~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~ 328 (466)
T PRK07036 250 CRRYDILYISDEVVTGFGRLG-HFFASEAVFGIQPDIITFAKGLTSGYQPLGAVIISERLLDVISGPNAKGNVFTHGFTY 328 (466)
T ss_pred HHHcCCEEEEeechhCCCcCc-hhhhhhhhcCCCCCEEEEccccccCccccEEEEEcHHHHHHHhcccCcCcccccCCCC
Confidence 999999999999999999999 789998 789999999999999999 599999999999998752 2477899
Q ss_pred CCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCc---cHHHHHH
Q 011777 352 GGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTP---AKAETAV 428 (477)
Q Consensus 352 ~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~---~~~~~~~ 428 (477)
++||++|++++++|++++++++++++++++++|+++|+++ .+++.+.++||.|+|++++++.+...+++ +......
T Consensus 329 ~gnpl~~aaa~a~Le~i~~~~l~~~~~~~g~~l~~~L~~l-~~~~~v~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~ 407 (466)
T PRK07036 329 SGHPVACAAALKNIEIMEREGLCEHVREVGPYFEERLASL-RELPLVGDVRGDHLMACVECVADKGSKALLPEDIAIGQR 407 (466)
T ss_pred CCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHh-ccCCCEEEEEeeceEEEEEEccCccccCCCCchhHHHHH
Confidence 9999999999999999998999999999999999999887 56899999999999999999865443333 2234567
Q ss_pred HHHHHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 429 LFEKLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 429 ~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
+.+.|+++||++.+. ++.+||+||+++|++|||+++++|++++++
T Consensus 408 ~~~~~~~~Gvl~~~~---~~~~~l~Ppl~it~~~id~~~~~l~~al~~ 452 (466)
T PRK07036 408 IDRHCQERGLLVRPL---EHLCVLSPPLIITRAQIDEIVAILRAAIEE 452 (466)
T ss_pred HHHHHHHCCcEEeec---CCEEEEeCCCcCCHHHHHHHHHHHHHHHHH
Confidence 888999999999864 378999999999999999999999998864
No 24
>PRK06105 aminotransferase; Provisional
Probab=100.00 E-value=6.1e-73 Score=580.06 Aligned_cols=414 Identities=29% Similarity=0.462 Sum_probs=351.1
Q ss_pred HHHHHHHhhhcCCCccc--cc--cCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccc-
Q 011777 58 DQVFQKRKQFLGPSIFH--YY--QKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHAT- 132 (477)
Q Consensus 58 ~~~~~~~~~~~~~~~~~--~~--~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~- 132 (477)
.+++++..++.+.+... .+ ..|+++++|+|+|+||.|||+||||.+|++++++||+||+|++|+.+|++++.+..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~ 85 (460)
T PRK06105 6 NSLEARDIAYHLHPYTNARRHEEEGPLVIERGEGIYVYDDAGKRYIEGMAGLWSVALGFSEQRLVEAAARQMKKLPFYHT 85 (460)
T ss_pred HHHHHhhhhhcccCCcccccccccCCceEEeeeEEEEEECCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHHhCCCeec
Confidence 45666666665433221 11 35899999999999999999999999999999999999999999999999876432
Q ss_pred -cccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhc------cCCceEEEEccCccCCcccccccccCC
Q 011777 133 -TIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLS------TGNLGMIALRNAYHGGSSGTIGLTALN 205 (477)
Q Consensus 133 -~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~------~~~~~ii~~~~~yhG~~~~~~~~~~~~ 205 (477)
..+.++...+|+++|++.+|.++++|+|+|||+||||+|||+||.+ ++|.+||.++++|||++.+++++++.+
T Consensus 86 ~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~ 165 (460)
T PRK06105 86 FSHKSHGPVIDLAEKLVAMAPVPMSKVFFTNSGSEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLP 165 (460)
T ss_pred ccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCc
Confidence 2357888999999999999877889999999999999999999876 468899999999999999999888755
Q ss_pred CCCCCC--CCCCeeeecCCCCcCCCCCC-C----HHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHH
Q 011777 206 TWKYPI--PQGEIHHVVNPDPYHGSFGS-D----AARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVY 278 (477)
Q Consensus 206 ~~~~~~--~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~ 278 (477)
.++..+ ..+++.+++.|+.+++.... . ...+.+++++++...+++++++||+||+|+++|+++++++||++|+
T Consensus 166 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr 245 (460)
T PRK06105 166 NNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQ 245 (460)
T ss_pred ccccccCCCCCCCEEcCCCcccccccCCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHH
Confidence 443322 23567788888766643211 1 1224678888886444578999999999999999999999999999
Q ss_pred HHHHHhCcEEEEcCcccCccCCCCCCccccccCCCcceeeecccccCc-cceEEEEeCHHHHHhhccc-------ccccC
Q 011777 279 DIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIGNG-LPLGAVVTTPEIANVMAQK-------IQFNT 350 (477)
Q Consensus 279 ~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg~G-~pig~v~~~~~~~~~~~~~-------~~~~t 350 (477)
++|++||+++|+|||||||||+| ++|+++++++.|||+|+||+++|| +|+|++++++++++.+... .|++|
T Consensus 246 ~lc~~~~~llI~DEv~tG~GRtG-~~f~~~~~~v~PDi~~~gK~lggG~~P~~av~~~~~i~~~~~~~~~~~~~~~h~~T 324 (460)
T PRK06105 246 AVLRKYDILLVADEVICGFGRTG-NMFGCETFGIKPDILVMSKQLSSSYQPLSAVLMNEKVYDPIADESGKIGTFGHGFT 324 (460)
T ss_pred HHHHHcCCeEEEeccccCCCcCc-hhhhHHhcCCCCCeeeeecccccCcccceEEEEcHHHHHHHhcccccCcccccCCC
Confidence 99999999999999999999999 799999999999999999999998 6999999999999887531 37889
Q ss_pred CCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCcc---HHHHH
Q 011777 351 FGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPA---KAETA 427 (477)
Q Consensus 351 ~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~---~~~~~ 427 (477)
|++||++|++++++|++++++++++++++++++|+++|+++ .+++.+.++||.|+|+++++..+...+.+. .....
T Consensus 325 ~~gnpl~~aaa~a~L~~i~~~~l~~~v~~~g~~l~~~L~~l-~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~a~ 403 (460)
T PRK06105 325 ASGHPVAAAVALENLAIIEERDLVGNAAERGARLQARLRAL-ADHPLVGEVRGVGLIAAVELVADKATKTPFEPPGKVGA 403 (460)
T ss_pred CCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHh-hcCCCeEEEEecceEEEEEEecCcccCCCCCchhHHHH
Confidence 99999999999999999999999999999999999999999 789999999999999999997654333331 22346
Q ss_pred HHHHHHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 428 VLFEKLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 428 ~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
.+.+.++++||++.+. ++++||+||+++|++|||+++++|++++++
T Consensus 404 ~i~~~~~~~Gvl~~~~---g~~i~l~Ppl~it~~eid~~~~~l~~~l~~ 449 (460)
T PRK06105 404 RANAAAHEHGVISRAM---GDTLAFCPPLIITAAQVDEMVDRFGRALDD 449 (460)
T ss_pred HHHHHHHHCCeEEEec---CCEEEEECCCccCHHHHHHHHHHHHHHHHH
Confidence 7888999999999874 479999999999999999999999999865
No 25
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=3e-73 Score=580.31 Aligned_cols=397 Identities=30% Similarity=0.479 Sum_probs=342.5
Q ss_pred HHHHHHHhhhcCCCccc-------cccCceeEEeeec-cEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhcc
Q 011777 58 DQVFQKRKQFLGPSIFH-------YYQKPLNIVEGKM-QYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQ 129 (477)
Q Consensus 58 ~~~~~~~~~~~~~~~~~-------~~~~p~~~~~g~G-~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~ 129 (477)
.+.++++++++.+.+.. ....|+++++|+| +||||.|||+||||.+|+++.++||+||+|++|+.+|++++.
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~l~D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~l~ 115 (459)
T PRK11522 36 REVIEYFKEHVNPGFLEYRKSVTAGGDYGAVEWQAGGLNTLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQP 115 (459)
T ss_pred HHHHHHHHhhcCHHHHHhhhcccccCCCCeeEEeccCeEEEEECCCCEEEECCcCHHhhhcCCCCHHHHHHHHHHHhhCc
Confidence 45667777777554211 1134679999999 999999999999999999999999999999999999999877
Q ss_pred ccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccC---CceEEEEccCccCCcccccccccCCC
Q 011777 130 HATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTG---NLGMIALRNAYHGGSSGTIGLTALNT 206 (477)
Q Consensus 130 ~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~---~~~ii~~~~~yhG~~~~~~~~~~~~~ 206 (477)
+.+..+.++...+|+++|++.+|.+.++++|+||||||||.|+|+||.+++ |.+||.++++|||++.++++.++...
T Consensus 116 ~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~ 195 (459)
T PRK11522 116 LHSQELLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKST 195 (459)
T ss_pred ccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCchHHHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcc
Confidence 655556688899999999999988788999999999999999999999985 67899999999999999999987655
Q ss_pred CCCCCCC--CCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhc--cCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHH
Q 011777 207 WKYPIPQ--GEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDF--GTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVR 282 (477)
Q Consensus 207 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~--~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~ 282 (477)
++.++.+ +++.+++ +++ .++++++++. .+++++++||+||+++++|+++||++||++|+++|+
T Consensus 196 ~~~~~~~~~~~~~~~~--------~~d-----~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~ 262 (459)
T PRK11522 196 FRKPFMPLLPGFRHVP--------FGN-----IEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCD 262 (459)
T ss_pred cccCCCCCCCCCcccC--------CCC-----HHHHHHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHH
Confidence 5433221 2333333 222 3567766652 234679999999999999999999999999999999
Q ss_pred HhCcEEEEcCcccCccCCCCCCccccccCCCcceeeecccccCc-cceEEEEeCHHHHHhhc--ccccccCCCCcHHHHH
Q 011777 283 KAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIGNG-LPLGAVVTTPEIANVMA--QKIQFNTFGGNPVCSA 359 (477)
Q Consensus 283 ~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg~G-~pig~v~~~~~~~~~~~--~~~~~~t~~~~~~~~a 359 (477)
+||+++|+||||+||||+| ++|+++++|+.||++||||++||| +|+|++++++++++.+. ...+++||++||++|+
T Consensus 263 ~~g~llI~DEV~tG~GRtG-~~~a~e~~gv~PDivt~gK~lggG~~Pigav~~~~~i~~~~~~~~~~~~~T~~gnp~~~A 341 (459)
T PRK11522 263 EFGALLILDEVQTGMGRTG-KMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFDNPFLHTTTFGGNPLACA 341 (459)
T ss_pred HcCCEEEeccceecCCccc-hhhhhhccCCCCCEEEechhhhCCCccceeEEEcHHHHHHhccCCcccCCCCCCCHHHHH
Confidence 9999999999999999999 799999999999999999999999 69999999999998774 3368899999999999
Q ss_pred HHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCC-CceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCc
Q 011777 360 GGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHD-IIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGV 438 (477)
Q Consensus 360 aa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~-~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv 438 (477)
+++++|++++++++.+++++++++|+++|+++..+++ .+.++||.|+|+++++..+ .....+.+.|+++||
T Consensus 342 aala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~VrG~Gl~~giel~~~--------~~~~~i~~~l~~~Gv 413 (459)
T PRK11522 342 AALATINVLLEQNLPAQAEQKGDYLLDGFRQLAREYPDLVQEARGKGMLMAIEFVDN--------EIGYNFASEMFRQRV 413 (459)
T ss_pred HHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEeceeEEEEEecCc--------hHHHHHHHHHHHCCe
Confidence 9999999999999999999999999999999988897 7899999999999999642 235578899999999
Q ss_pred eeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 439 LVGKGGLHGNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 439 ~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
++.+.+..++++||.||+++|++|||+++++|++++++
T Consensus 414 l~~~~~~~~~~lr~~Ppl~~t~~~id~~l~~l~~~l~~ 451 (459)
T PRK11522 414 LVAGTLNNAKTIRIEPPLTLTIEQCEQVLKAARKALAA 451 (459)
T ss_pred EEEecCCCCCEEEEECCccCCHHHHHHHHHHHHHHHHH
Confidence 99876545689999999999999999999999998864
No 26
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1.5e-72 Score=572.26 Aligned_cols=412 Identities=31% Similarity=0.452 Sum_probs=354.6
Q ss_pred HHHHHHHhhhcCCCccccccCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhcccccc-ccC
Q 011777 58 DQVFQKRKQFLGPSIFHYYQKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATT-IYL 136 (477)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~-~~~ 136 (477)
++++++...++.++... ..|+.+++|+|+||||.|||+||||++|++++++||+||+|++|+.+|++++.+... .+.
T Consensus 4 ~~~~~~~~~~~~~~~~~--~~p~~i~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~ 81 (425)
T PRK07495 4 TSLTDRRNAAISRGVGM--TTQIYADRAENAEIWDKEGRRYIDFAAGIAVVNTGHRHPRVIAAVKAQLDRFTHTCHQVVP 81 (425)
T ss_pred HHHHHHHHhhhccccCc--CCCeeEEeeeecEEEeCCCCEEEEccccHHhhccCCCCHHHHHHHHHHHhhccCcccCccC
Confidence 45666655555443221 237999999999999999999999999999999999999999999999998766433 466
Q ss_pred ChHHHHHHHHHHhhCCCCC-CEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccC-CCCCCCCCC-
Q 011777 137 HHAIADFAEALASKMPGNL-KVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTAL-NTWKYPIPQ- 213 (477)
Q Consensus 137 ~~~~~~l~~~La~~~~~~~-~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~-~~~~~~~~~- 213 (477)
++...+|+++|++.+|.+. ++|+|+||||||||.|+|+||.++||.+||.++++|||++.+++++++. ..++..+.+
T Consensus 82 ~~~~~~la~~l~~~~p~~~~~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~ 161 (425)
T PRK07495 82 YENYVRLAERLNALVPGDFAKKTIFVTTGAEAVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAM 161 (425)
T ss_pred CHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCC
Confidence 7889999999999998653 7999999999999999999999999999999999999999998887764 234333322
Q ss_pred -CCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhc-cCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEc
Q 011777 214 -GEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDF-GTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIAD 291 (477)
Q Consensus 214 -~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~-~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~D 291 (477)
+++.++++|+.+++ .+...++++++++++. .+++++++||+||+++++|+++++++|+++|+++|++||+++|+|
T Consensus 162 ~~~~~~~~~~~~~~g---~~~~~~~~~l~~~~~~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~D 238 (425)
T PRK07495 162 MPDVYHVPFPVELHG---VSVEQSLAALDKLFKADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIAD 238 (425)
T ss_pred CCCeEEecCCccccc---ccHHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 46777777766543 1233456677887753 245689999999999999988999999999999999999999999
Q ss_pred CcccCccCCCCCCccccccCCCcceeeecccccCccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchh
Q 011777 292 EVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIGNGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKE 371 (477)
Q Consensus 292 Ev~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~ 371 (477)
|||+||||+| .+|+++++++.||++||||++++|+|+|++++++++++.+....+.+||++||++|++++++|++++++
T Consensus 239 Ev~tG~gr~G-~~~a~~~~gv~pDi~tlsK~l~~G~pigav~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~ 317 (425)
T PRK07495 239 EVQTGFARTG-KLFAMEHHEVAADLTTMAKGLAGGFPLAAVTGRAEIMDAPGPGGLGGTYGGNPLGIAAAHAVLDVIEEE 317 (425)
T ss_pred chhhcCCcCC-CceeecccCCCCCEEeehhhhcCCccceEEEEcHHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHhc
Confidence 9999999999 688899999999999999999999999999999999998877778899999999999999999999988
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCCCCEEE
Q 011777 372 RRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLHGNVFR 451 (477)
Q Consensus 372 ~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iR 451 (477)
++.+++++++++++++|+++.++++.+.+++|.|+|+++++..+. .+.|+......+.+.++++||++.+.+..++++|
T Consensus 318 ~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~iel~~~~-~~~~~~~~~~~~~~~~~~~Gvl~~~~g~~~~~~r 396 (425)
T PRK07495 318 DLCERANQLGNRLKQRLASLRETVPEIADIRGPGFMNAVEFNDAD-SGLPSAEFANRVRLKALEKGLILLTCGVHGNVIR 396 (425)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhCCCeeeeecCceEEEEEEecCC-CCCccHHHHHHHHHHHHHCCeEEeecCCCCCEEE
Confidence 999999999999999999999889989999999999999997543 3445444567789999999999987655579999
Q ss_pred EeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 452 IKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 452 i~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
|.||+++|++|+|+++++|++++++
T Consensus 397 ~~Ppl~it~~~id~~~~~l~~~l~~ 421 (425)
T PRK07495 397 FLAPITIQDDVFAEALDILEASILE 421 (425)
T ss_pred EeCCCccCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999875
No 27
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-72 Score=576.49 Aligned_cols=417 Identities=29% Similarity=0.496 Sum_probs=358.9
Q ss_pred CHHHHHHHHhhhcCCCccccccCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhcccccc-c
Q 011777 56 SADQVFQKRKQFLGPSIFHYYQKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATT-I 134 (477)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~-~ 134 (477)
++++++++.++++.+.... ...|+++++|+|+||||.|||+||||.+|++++++||+||+|++|+.+|++++.+... .
T Consensus 3 ~~~~~~~~~~~~~~~~~~~-~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~~~~~~~~~ 81 (445)
T PRK08593 3 KAHQLIQEDEHYFAKSGRI-KYYPLVIDHGYGATLTDVDGKTYIDLLASASSQNVGHAPPRVVEAIKAQADKFIHYTPAY 81 (445)
T ss_pred hHHHHHHHHHHhhcccccc-CCCCceEEeeeeCEEEeCCCCEEEECCccHHhhcCCCCCHHHHHHHHHHHHhccCccccc
Confidence 4567788777776543221 2248999999999999999999999999999999999999999999999998766543 3
Q ss_pred cCChHHHHHHHHHHhhCCCCC-CEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCC-CCCCC-
Q 011777 135 YLHHAIADFAEALASKMPGNL-KVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNT-WKYPI- 211 (477)
Q Consensus 135 ~~~~~~~~l~~~La~~~~~~~-~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~-~~~~~- 211 (477)
+.++...+|+++|++.+|... ++|+|+|||+||||.|+|+||.+++|.+||.++++|||++.+++++++... ++..+
T Consensus 82 ~~~~~~~~lae~L~~~~p~~~~~~v~f~~SGseA~e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~ 161 (445)
T PRK08593 82 MYHEPLVRLAKKLCELAPGDFEKRVTFGLSGSDANDGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYG 161 (445)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCC
Confidence 568889999999999998653 699999999999999999999999999999999999999999998886432 22222
Q ss_pred -CCCCeeeecCCCCcCCCCCCCH----HHHHHHHHHHHhc-cCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhC
Q 011777 212 -PQGEIHHVVNPDPYHGSFGSDA----ARYAQDLQDHIDF-GTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAG 285 (477)
Q Consensus 212 -~~~~~~~~~~~~~~~~~~~~~~----~~~~~~le~~i~~-~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~g 285 (477)
..+++.+++.|+.+++++.... ..++++++++++. ..++++++||+||+++++|+++|+++||++|+++|++||
T Consensus 162 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g 241 (445)
T PRK08593 162 PLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHG 241 (445)
T ss_pred CCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 2357788888888877654332 2345666666653 234689999999999999999999999999999999999
Q ss_pred cEEEEcCcccCccCCCCCCccccccCCCcceeeecccccCccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHH
Q 011777 286 GVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIGNGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVL 365 (477)
Q Consensus 286 illI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l 365 (477)
+++|+||||+||||+| .+|+++++++.||++|+||++++|+|+|++++++++++.+....+.+|+++||++|++++++|
T Consensus 242 ~llI~DEv~tg~GrtG-~~~a~~~~gv~pDi~t~gK~l~~G~p~gav~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l 320 (445)
T PRK08593 242 ILFAVDDIQQGLGRTG-KWSSISHFNITPDLMSFGKSLAGGMPMSAIVGRKEIMESLEAPAHLFTTGANPVSCAAALATI 320 (445)
T ss_pred CEEEEechhhCCCcCc-hHHHHHhcCCCCCEeeecccccCCcccEEEEEcHHHHhhhccCCCCCCCCCCHHHHHHHHHHH
Confidence 9999999999999999 788889999999999999999999999999999999998876667789999999999999999
Q ss_pred HhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCC
Q 011777 366 RVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGL 445 (477)
Q Consensus 366 ~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~ 445 (477)
+.++++++++++++++++|+++|+++.++++.+.++||.|+|+++++..+...+.++......+.+.|+++||++.+.+
T Consensus 321 ~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~gi~l~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~~- 399 (445)
T PRK08593 321 DMIEDESLLQRSAEKGEYARKRFDQWVSKYNFVGDVRGYGLSIGIDIVSDKKLKTRDNEAALKICNYCFEHGVVIIAVA- 399 (445)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHHHHHhcCCcEEEEeccceEEEEEEecCCCcCCCcHHHHHHHHHHHHHCCeEEeccC-
Confidence 9999889999999999999999999998999999999999999999976543444555556788999999999997642
Q ss_pred CCCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 446 HGNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 446 ~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
++++||.||+++|++||++++++|++++++
T Consensus 400 -~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 429 (445)
T PRK08593 400 -GNVLRFQPPLVITYEQLDTALNTIEQAFTA 429 (445)
T ss_pred -CCEEEEECCCccCHHHHHHHHHHHHHHHHH
Confidence 589999999999999999999999998864
No 28
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=100.00 E-value=3.5e-73 Score=580.63 Aligned_cols=397 Identities=28% Similarity=0.450 Sum_probs=340.7
Q ss_pred CceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhcccccc-ccCChHHHHHHHHHHhhCCCC--
Q 011777 78 KPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATT-IYLHHAIADFAEALASKMPGN-- 154 (477)
Q Consensus 78 ~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~-~~~~~~~~~l~~~La~~~~~~-- 154 (477)
.|+++++|+|+||||.|||+||||.+|++++++||+||+|++|+.+|++++.+... .+.++...+|+++|++++|..
T Consensus 21 ~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~ 100 (442)
T TIGR00709 21 LPTAFAKAQGCWVTDVEGKEYLDFLAGAGTLALGHNHPNMKQKILDYLQSGLPLHTLDLTTPLKDAFIEALLNIIPKRKM 100 (442)
T ss_pred CCceEEeccccEEEeCCCCEEEEccccHhhhcCCCCCHHHHHHHHHHHHhccCccccccCcHHHHHHHHHHHHhCCCcCC
Confidence 58999999999999999999999999999999999999999999999998654433 356788999999999999753
Q ss_pred -CCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCC--CCCCeeeecCCCCcCCCCCC
Q 011777 155 -LKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPI--PQGEIHHVVNPDPYHGSFGS 231 (477)
Q Consensus 155 -~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 231 (477)
...++|+||||||||.|||+||.+|+|.+||+++++|||++.+++++++...++... ..+++..++.|+.++++++.
T Consensus 101 ~~~~~f~~~sGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (442)
T TIGR00709 101 DYKLQFPGPSGADAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGI 180 (442)
T ss_pred CccEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCccccccccC
Confidence 345667799999999999999999999999999999999999999998754333222 12567778888888887764
Q ss_pred CHHH----HHHHHHHHHhc--cCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCc
Q 011777 232 DAAR----YAQDLQDHIDF--GTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYW 305 (477)
Q Consensus 232 ~~~~----~~~~le~~i~~--~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~ 305 (477)
+.+. +.+.+++.+.. ...+++++||+||++|++|+++++++||++|+++|++||+++|+||||+||||+| ++|
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG-~~~ 259 (442)
T TIGR00709 181 GGEAGSNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSG-TMF 259 (442)
T ss_pred CchhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCC-chh
Confidence 3222 22334444431 1236799999999999999999999999999999999999999999999999999 799
Q ss_pred cccccCCCcceeeecccccCccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHH
Q 011777 306 GFETQGVIPDIVTMAKGIGNGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLL 385 (477)
Q Consensus 306 ~~~~~gv~pDivt~sK~lg~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~ 385 (477)
+++++++.||++|+||++++|+|+|+++++++ ++.+....+++||++||++|+|++++|+.++++++.+++++++++|+
T Consensus 260 a~~~~gv~PDiv~~gK~l~~G~Pigav~~~~~-~~~~~~~~~~~T~~gnpla~aaa~a~L~~i~~~~l~~~~~~~g~~l~ 338 (442)
T TIGR00709 260 AFEHAGIEPDFVVMSKAVGGGLPLAVLLIAPE-FDAWQPAGHTGTFRGNQLAMVTGTEALNYWKDDNLAQNAQERGERIT 338 (442)
T ss_pred HHHHcCCCCcEEEEcccccCCcccEEEEEchH-HhccCCCcCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998 46555556889999999999999999999988999999999999999
Q ss_pred HHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCC------ccHHHHHHHHHHHHHcCceeeccCCCCCEEEEeCCCCCc
Q 011777 386 GRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKT------PAKAETAVLFEKLRELGVLVGKGGLHGNVFRIKPPMCFT 459 (477)
Q Consensus 386 ~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~------~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t 459 (477)
++|+++.++++.+.++||.|+|+++++.++..++. ++......+...|+++||++.+.+..++++||.||+++|
T Consensus 339 ~~L~~l~~~~~~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~~l~~~Ppl~it 418 (442)
T TIGR00709 339 SFLDDMIKEHPCIGNVRGRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACFENGLLLETGGREGEVFRLLCPITID 418 (442)
T ss_pred HHHHHHHHhCCCeeeeeccceEEEEEEccCcccccccccCCcchHHHHHHHHHHHHCCeEEeecCCCCCEEEEECCCCCC
Confidence 99999998999999999999999999976532221 123345678889999999998766567999999999999
Q ss_pred HHHHHHHHHHHHHHHhh
Q 011777 460 KDDADFLVDALDYSMSK 476 (477)
Q Consensus 460 ~e~i~~~l~~l~~~l~~ 476 (477)
++||++++++|++++.+
T Consensus 419 ~~ei~~~~~~l~~~l~~ 435 (442)
T TIGR00709 419 QEECEEGISRFKQAVEE 435 (442)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999999864
No 29
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=100.00 E-value=1e-72 Score=581.40 Aligned_cols=414 Identities=26% Similarity=0.449 Sum_probs=348.3
Q ss_pred HHHHHHHhhhcCCCccc--c-ccCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhcccccc-
Q 011777 58 DQVFQKRKQFLGPSIFH--Y-YQKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATT- 133 (477)
Q Consensus 58 ~~~~~~~~~~~~~~~~~--~-~~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~- 133 (477)
++-..+..+.+.|-... . ...|+++++|+|+||||.|||+||||.+|+++++|||+||+|++|+.+|++++.+...
T Consensus 48 ~~~~~~~~~~~~p~~~~~~~~~~~p~~i~~~~G~~l~D~dG~~ylD~~sg~~~~~lGh~hp~v~~Av~~ql~~~~~~~~~ 127 (504)
T PLN02760 48 EENGFKGHDMLAPFTAGWQSTDLEPLVIEKSEGSYVYDINGKKYLDALAGLWCTALGGSEPRLVAAATEQLNKLPFYHSF 127 (504)
T ss_pred hhhhhccCCcccCcccccccccCCCceEEeeeeeEEEECCCCEEEEcCcCHHhcccCCCCHHHHHHHHHHHhhccceecc
Confidence 34445555555443221 1 2358999999999999999999999999999999999999999999999998765432
Q ss_pred -ccCChHHHHHHHHHHhhC-CCCCCEEEEeCChHHHHHHHHHHHHhc------cCCceEEEEccCccCCcccccccccCC
Q 011777 134 -IYLHHAIADFAEALASKM-PGNLKVVYFVNSGTEANELAMLMARLS------TGNLGMIALRNAYHGGSSGTIGLTALN 205 (477)
Q Consensus 134 -~~~~~~~~~l~~~La~~~-~~~~~~v~~~~sGseA~~~Al~~ar~~------~~~~~ii~~~~~yhG~~~~~~~~~~~~ 205 (477)
.+.++...+|+++|.+.+ +.++++++|+|||+|||+.|||+||.| ++|.+||+++++|||++.+++++++.+
T Consensus 128 ~~~~~~~~~~lae~L~~~~~~~~~~~v~f~~SGsEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~ 207 (504)
T PLN02760 128 WNRTTKPSLDLAKELLEMFTARKMGKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLP 207 (504)
T ss_pred cccCcHHHHHHHHHHHhhcCCCCCCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCCh
Confidence 356788999999999985 455679999999999999999999976 357899999999999999999888765
Q ss_pred CCCCC--CCCCCeeeecCCCCcCCCCCC-CH----HHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHH
Q 011777 206 TWKYP--IPQGEIHHVVNPDPYHGSFGS-DA----ARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVY 278 (477)
Q Consensus 206 ~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~ 278 (477)
.++.. .+..++.+++.|+.+++++.. +. ..+.+++++++...+++++++||+||+++++|+++|+++||++|+
T Consensus 208 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr 287 (504)
T PLN02760 208 ALHQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQ 287 (504)
T ss_pred hhccCCCCCCCCcEEeCCCcccccCCCCCcHHHHHHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHH
Confidence 44322 223567788888777654322 11 224567888775444568999999999999999999999999999
Q ss_pred HHHHHhCcEEEEcCcccCccCCCCCCccccccCCCcceeeecccccCc-cceEEEEeCHHHHHhhcc-------cccccC
Q 011777 279 DIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIGNG-LPLGAVVTTPEIANVMAQ-------KIQFNT 350 (477)
Q Consensus 279 ~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg~G-~pig~v~~~~~~~~~~~~-------~~~~~t 350 (477)
++|++||++||+|||||||||+| .+|+++++|+.|||+||||+++|| +|+|++++++++++.+.. ..|++|
T Consensus 288 ~lc~~~g~lLI~DEV~TGfGRtG-~~~a~e~~gv~PDivtlgK~lggG~~PigAv~~~~~i~d~~~~~~~~~~~~~h~~T 366 (504)
T PLN02760 288 AVLKKYDILFIADEVICAFGRLG-TMFGCDKYNIKPDLVSLAKALSSAYMPIGAVLVSPEISDVIHSQSNKLGSFAHGFT 366 (504)
T ss_pred HHHHHcCCEEEecchhhCCcccc-hhhHHHhcCCCCcEEEecccccCCccccceEeecHHHHhhhhcccccccCcccCCC
Confidence 99999999999999999999999 799999999999999999999999 599999999999998753 257899
Q ss_pred CCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCcc---HHHHH
Q 011777 351 FGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPA---KAETA 427 (477)
Q Consensus 351 ~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~---~~~~~ 427 (477)
|++||++|++++++|++++++++++++++++++|+++|+++ .+++++.++||.|+|+++++.++...+++. .....
T Consensus 367 ~~gnPl~~Aaala~Le~i~~~~l~~~~~~~g~~l~~~L~~l-~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~ 445 (504)
T PLN02760 367 YSGHPVSCAVALEALKIYKERNIPEHVNKIAPRFQDGIKAF-SGSPIIGEIRGTGLILGTEFVDNKSPNDPFPAEWGVGA 445 (504)
T ss_pred CCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH-hcCCCeeeEEeCceEEEEEEecCCcccccccchhHHHH
Confidence 99999999999999999999999999999999999999998 678999999999999999997654433332 22356
Q ss_pred HHHHHHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 428 VLFEKLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 428 ~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
.+.+.|+++||++.+. ++.+||+||+++|++|||+++++|++++++
T Consensus 446 ~i~~~~~~~Gvl~~~~---g~~lrl~Ppl~it~eeid~~~~~l~~al~~ 491 (504)
T PLN02760 446 YFGAECKKRGMLVRVA---GDNIMMSPPLIITPEEVDELISIYGKALKA 491 (504)
T ss_pred HHHHHHHhCCcEEEec---CCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 7889999999999864 468999999999999999999999999864
No 30
>PRK06917 hypothetical protein; Provisional
Probab=100.00 E-value=1.8e-72 Score=574.55 Aligned_cols=395 Identities=32% Similarity=0.513 Sum_probs=342.1
Q ss_pred eEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhcccccc-ccCChHHHHHHHHHHhhCCCCCCEEE
Q 011777 81 NIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATT-IYLHHAIADFAEALASKMPGNLKVVY 159 (477)
Q Consensus 81 ~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~-~~~~~~~~~l~~~La~~~~~~~~~v~ 159 (477)
++++|+|+||||.|||+||||.+|++++++||+||+|++|+++|++++.+... .+.++...+|+++|++.+|...++++
T Consensus 16 ~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~hp~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~ 95 (447)
T PRK06917 16 VISHGKGVYLYDQNGNKYFDGSSGAVTAGIGHGVKEIADAIKEQAEEVSFVYRSQFTSEPAEKLAKKLSDLSPGDLNWSF 95 (447)
T ss_pred eEEeeeeeEEEeCCCCEEEECchhHHhccCCCCCHHHHHHHHHHHhhCcCccccccCCHHHHHHHHHHHHhCCCCCCEEE
Confidence 58999999999999999999999999999999999999999999998755432 35688899999999999987778999
Q ss_pred EeCChHHHHHHHHHHHHhc------cCCceEEEEccCccCCcccccccccCCCCCCCCC--CCCeeeecCCCCcCCCCCC
Q 011777 160 FVNSGTEANELAMLMARLS------TGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIP--QGEIHHVVNPDPYHGSFGS 231 (477)
Q Consensus 160 ~~~sGseA~~~Al~~ar~~------~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 231 (477)
|++|||||+|.|+|+||.+ ++|.+||.|+++|||++.+++++++...++..+. ..++..++.|..++++++.
T Consensus 96 f~~sGsEAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 175 (447)
T PRK06917 96 FVNSGSEANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQK 175 (447)
T ss_pred EeCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCC
Confidence 9999999999999999765 6789999999999999999999877544433222 1356666777777776654
Q ss_pred CHH----HHHHHHHHHHhccCCCCeeEEEecccCCC-CCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCcc
Q 011777 232 DAA----RYAQDLQDHIDFGTSGKVAGFIAETIQGV-GGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWG 306 (477)
Q Consensus 232 ~~~----~~~~~le~~i~~~~~~~~a~vi~epi~~~-~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~ 306 (477)
+.. .+++.++++++....+++|+||+||++++ +|+++|+++||++|+++|++||+++|+|||++||||+| .+|+
T Consensus 176 ~~~~~~~~~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG-~~~a 254 (447)
T PRK06917 176 VYPTCQLACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTG-AMFA 254 (447)
T ss_pred ChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCccc-chhh
Confidence 422 24567788887444468999999999985 67899999999999999999999999999999999999 7999
Q ss_pred ccccCCCcceeeecccccCcc-ceEEEEeCHHHHHhhccc----ccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHH
Q 011777 307 FETQGVIPDIVTMAKGIGNGL-PLGAVVTTPEIANVMAQK----IQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVG 381 (477)
Q Consensus 307 ~~~~gv~pDivt~sK~lg~G~-pig~v~~~~~~~~~~~~~----~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~ 381 (477)
++++++.||++|+||+++||+ |+|++++++++++.+... .+++||++||++|++++++|++++++++++++++++
T Consensus 255 ~~~~gv~PDi~~~gK~l~~G~~Pi~a~~~~~~i~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~l~~~~~~~g 334 (447)
T PRK06917 255 MEHWGVEPDIMTLGKGLGAGYTPIAATVVSDRVMEPILRGSRSIMSGHTLSANPLSAATALAVLEYMEKHNLPEKAAEKG 334 (447)
T ss_pred HHhcCCCCCEEEeeehhccCCcceEEEEEcHHHHHHHhccCcccccccCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 999999999999999999996 999999999999987532 467899999999999999999998889999999999
Q ss_pred HHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCcc---HHHHHHHHHHHHHcCceeeccC-----CCCCEEEEe
Q 011777 382 SHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPA---KAETAVLFEKLRELGVLVGKGG-----LHGNVFRIK 453 (477)
Q Consensus 382 ~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~---~~~~~~~~~~l~~~Gv~v~~~~-----~~~~~iRi~ 453 (477)
++|+++|+++.++++.+.++||.|+|++++++.+...+++. ......+.+.|+++||++.+.+ ..++.+||+
T Consensus 335 ~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~g~~~~~i~l~ 414 (447)
T PRK06917 335 EYLIKGLQKVQQQSTIIGDVRGKGLLIGVEFVADKKTKQPFSKSQAVASELISVAAKNGLLLYPAVAGQDGKEGDAVIIA 414 (447)
T ss_pred HHHHHHHHHHHhcCCCEEEEeecceEEEEEEeccCCcCCCCcchhHHHHHHHHHHHhCCcEEEecccccCCCCCCEEEEE
Confidence 99999999999889999999999999999998654433332 2346778899999999998752 246899999
Q ss_pred CCCCCcHHHHHHHHHHHHHHHhh
Q 011777 454 PPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 454 p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
||+++|++|||+++++|++++++
T Consensus 415 Ppl~it~~eid~~~~~l~~~l~~ 437 (447)
T PRK06917 415 PPMTITYSELDELLSIFAKSVEE 437 (447)
T ss_pred CCCcCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999865
No 31
>PRK06541 hypothetical protein; Provisional
Probab=100.00 E-value=3.4e-72 Score=574.00 Aligned_cols=419 Identities=31% Similarity=0.499 Sum_probs=356.8
Q ss_pred CHHHHHHHHhhhcCCCccc---ccc-CceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhcccc
Q 011777 56 SADQVFQKRKQFLGPSIFH---YYQ-KPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHA 131 (477)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~---~~~-~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~ 131 (477)
++.++.++.+++++..... +.. .|+++++|+|+||||.|||+||||.+|++++++||+||+|++|+.+|++++.+.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~q~~~~~~~ 87 (460)
T PRK06541 8 SDTDLQALAKRHLWMHFTRHGAYIDAPVPVIVRGEGCYIWDDRGKRYLDGLAGLFVVQVGHGRAELAEAAAKQAGTLAFF 87 (460)
T ss_pred cHHHHHHHhhcccccCccCccccccCCCceEEeCcccEEEeCCCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhCcCc
Confidence 5667777777777644322 222 378899999999999999999999999999999999999999999999987664
Q ss_pred cc-ccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhc---c---CCceEEEEccCccCCcccccccccC
Q 011777 132 TT-IYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLS---T---GNLGMIALRNAYHGGSSGTIGLTAL 204 (477)
Q Consensus 132 ~~-~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~---~---~~~~ii~~~~~yhG~~~~~~~~~~~ 204 (477)
.. .+.++...+++++|++..|.+.++|+|++|||||+|.|+|+||.+ + +|.+||.++++|||++.+++++++.
T Consensus 88 ~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~ 167 (460)
T PRK06541 88 PLWSYAHPPAIELAERLAALAPGDLNRVFFTTGGSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGL 167 (460)
T ss_pred cccccCCHHHHHHHHHHHHhCCCCcCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCC
Confidence 43 467888999999999999877889999999999999999999988 3 4789999999999999999999876
Q ss_pred CCCCCCCC--CCCeeeecCCCCcCCC-CCCCHH----HHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHH
Q 011777 205 NTWKYPIP--QGEIHHVVNPDPYHGS-FGSDAA----RYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLV 277 (477)
Q Consensus 205 ~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~----~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l 277 (477)
+.++..+. .+++.+++.|+.++++ ++++.. .+++.++++++..+++++++||+||+++++|+++++++||++|
T Consensus 168 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l 247 (460)
T PRK06541 168 PAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERV 247 (460)
T ss_pred hhhccccCCCCCCcEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHH
Confidence 54443222 3578888888888776 554432 2457788888644457899999999999999999999999999
Q ss_pred HHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCcceeeecccccCcc-ceEEEEeCHHHHHhhccc----ccccCCC
Q 011777 278 YDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIGNGL-PLGAVVTTPEIANVMAQK----IQFNTFG 352 (477)
Q Consensus 278 ~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~-pig~v~~~~~~~~~~~~~----~~~~t~~ 352 (477)
+++|++||+++|+||||+||||+| .+|+++++|+.||++||||++++|+ |+|++++++++++.+... .+++||+
T Consensus 248 ~~lc~~~g~llI~DEV~tGfGR~G-~~~a~~~~gv~PDivt~gK~l~~G~~pigav~~~~~i~~~~~~~~~~~~~~~T~~ 326 (460)
T PRK06541 248 REICDRYDVLLVSDEVICAFGRLG-EMFGCERFGYVPDIITCAKGITSGYSPLGAMIASDRLFEPFLDGPTMFLHGYTFG 326 (460)
T ss_pred HHHHHHcCCEEEEechhhCCCcCc-hhhhhhhcCCCCCEEEecccccCCccceeEEEEcHHHHHHhhcCCCccccCCCCC
Confidence 999999999999999999999999 7889999999999999999999996 999999999999887532 3678999
Q ss_pred CcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccH------HHH
Q 011777 353 GNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAK------AET 426 (477)
Q Consensus 353 ~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~------~~~ 426 (477)
+||+++++++++|++++++++.+++++++++|+++|+++.. ++.+.+++|.|+|+++++..+..++.|.. ...
T Consensus 327 gnp~~~aaala~l~~l~~~~~~~~~~~~g~~l~~~L~~l~~-~~~v~~vrg~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~ 405 (460)
T PRK06541 327 GHPVSAAVALANLDIFEREGLLDHVRDNEPAFRATLEKLLD-LPIVGDVRGDGYFYGIELVKDKATKETFTDDESERLLR 405 (460)
T ss_pred CCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhc-CCCeEEEEecceEEEEEEecCcccccCCcchhhhhhHH
Confidence 99999999999999998889999999999999999999875 88889999999999999976543333311 112
Q ss_pred HHHHHHHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 427 AVLFEKLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 427 ~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
..+.+.|+++||++.+.+...+++||+||+++|++|||+++++|++++.+
T Consensus 406 ~~~~~~l~~~Gi~~~~~~~g~~~lrl~Ppl~~t~~~id~~~~~l~~~l~~ 455 (460)
T PRK06541 406 GFLSPALFEAGLYCRADDRGDPVVQLAPPLISGQEEFDEIEQILRSVLTE 455 (460)
T ss_pred HHHHHHHHhCCeEEEecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 35778999999999875333579999999999999999999999999864
No 32
>PRK12403 putative aminotransferase; Provisional
Probab=100.00 E-value=5.3e-72 Score=573.14 Aligned_cols=415 Identities=27% Similarity=0.381 Sum_probs=346.9
Q ss_pred HHHHHHHhhhcCCCccc--cc--cCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhcccccc
Q 011777 58 DQVFQKRKQFLGPSIFH--YY--QKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATT 133 (477)
Q Consensus 58 ~~~~~~~~~~~~~~~~~--~~--~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~ 133 (477)
+++.++..++.+..... .+ ..|+++++|+|+||||.|||+||||.+|+++++|||+||+|++|+++|++++.+...
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~hp~v~~A~~~q~~~~~~~~~ 91 (460)
T PRK12403 12 RDYQAADAAHHIHAFLDQKALNAEGPRVMVRGEGLHLWDNDGKRYLDGMSGLWCTNLGYGRKDLAAAAARQMEQLPYYNM 91 (460)
T ss_pred HHHHHhhhcccccccccccccccCCCceEEeceeeEEEeCCCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhCCCeec
Confidence 55666555554332221 11 248999999999999999999999999999999999999999999999998765443
Q ss_pred c--cCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhcc---C---CceEEEEccCccCCcccccccccCC
Q 011777 134 I--YLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLST---G---NLGMIALRNAYHGGSSGTIGLTALN 205 (477)
Q Consensus 134 ~--~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~---~---~~~ii~~~~~yhG~~~~~~~~~~~~ 205 (477)
. +.++...+|+++|++.+|.+.++++|++||+|||++|||+||.++ + +..|+.+.++|||++.+++++++..
T Consensus 92 ~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~ 171 (460)
T PRK12403 92 FFHTTHPAVIELSELLFSLLPGHYSHAIYTNSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMK 171 (460)
T ss_pred ccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCc
Confidence 2 457889999999999998777899999999999999999999873 4 4568889999999999999988755
Q ss_pred CCCCCCC-CCCeeeecCCCCcCCCCCCCHH----HHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHH
Q 011777 206 TWKYPIP-QGEIHHVVNPDPYHGSFGSDAA----RYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDI 280 (477)
Q Consensus 206 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~----~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l 280 (477)
.++...+ .+++.+++.|+.++++.+.... .+++++++.+...+++++++||+||++|++|++.++++||++|+++
T Consensus 172 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~l 251 (460)
T PRK12403 172 FMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRI 251 (460)
T ss_pred cccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHH
Confidence 4332211 2567788888877765543222 2346676666434457899999999999999999999999999999
Q ss_pred HHHhCcEEEEcCcccCccCCCCCCccccccCCCcceeeecccccCcc-ceEEEEeCHHHHHhhcc----cccccCCCCcH
Q 011777 281 VRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIGNGL-PLGAVVTTPEIANVMAQ----KIQFNTFGGNP 355 (477)
Q Consensus 281 ~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~-pig~v~~~~~~~~~~~~----~~~~~t~~~~~ 355 (477)
|++||++||+||||+||||+| ++|+++++|+.||++|+||+++||+ |+|++++++++++.+.. ..|++||++||
T Consensus 252 c~~~g~lLI~DEV~tGfGRtG-~~~a~e~~gv~PDiv~~gK~lggG~~Piga~v~~~~i~~~~~~~~~~~~~~~T~~gnP 330 (460)
T PRK12403 252 CRQYDVLLCADEVIGGFGRTG-EWFAHEHFGFEPDTLSIAKGLTSGYVPMGGLVLSKRIAEALVEQGGVFAHGLTYSGHP 330 (460)
T ss_pred HHHcCCEEEEeccccCCCcCc-hhhhhhhcCCCCCeEEEcccccccccceEEEEECHHHHHHHhcCCCccccCCCCCCCH
Confidence 999999999999999999999 7999999999999999999999995 99999999999988743 23788999999
Q ss_pred HHHHHHHHHHHhhchhhHHHHHH-HHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccH---HHHHHHHH
Q 011777 356 VCSAGGLAVLRVIDKERRQAHCA-DVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAK---AETAVLFE 431 (477)
Q Consensus 356 ~~~aaa~a~l~~l~~~~~~~~~~-~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~---~~~~~~~~ 431 (477)
++|++++++|+++++++++++++ +++++++++|+++..+++.+.++||.|+|++++++.+...+.+.. .....+.+
T Consensus 331 l~~Aaala~L~~i~~~~l~~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~~~~ 410 (460)
T PRK12403 331 VAAAVAIANLKALRDEGVVTRVKDDTGPYLQRCLREVFGDHPLVGEVQGAGLVAALQFAEDKATRKRFANENDLAWRCRT 410 (460)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhcCCCEEeEeecceEEEEEEccCccccccccchhHHHHHHHH
Confidence 99999999999999889999996 999999999999998999999999999999999976543333321 22345677
Q ss_pred HHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 432 KLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 432 ~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
.++++||++.+. ++.+||+||+++|++|||+++++|++++++
T Consensus 411 ~~~~~Gll~~~~---~~~~~l~Ppl~it~~eid~~~~~l~~al~~ 452 (460)
T PRK12403 411 IGFEEGVIIRST---LGRMIMAPALVAGRAEIDELVDKTRIAVDR 452 (460)
T ss_pred HHHhCCEEEEec---CCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 889999999754 357899999999999999999999999865
No 33
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=100.00 E-value=7.9e-72 Score=573.04 Aligned_cols=423 Identities=29% Similarity=0.489 Sum_probs=364.7
Q ss_pred CCCCCCHHHHHHHHhhhcCCCccccccCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhccc
Q 011777 51 PYTGPSADQVFQKRKQFLGPSIFHYYQKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQH 130 (477)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~ 130 (477)
.++.|++.+++++..++++.+... ..|+++++|+|+||||.|||+||||.+|++++++||+||+|++|+.+|++++.+
T Consensus 11 ~~~~~~s~~~~~~~~~~~~~~~~~--~~~~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~ 88 (451)
T PRK06918 11 QIPGPKAASLLERRQNIVPKGVSN--GIPTFAQSANGALVTDVDGNQYIDFAGAIGTINVGHSHPKVKEALHKQVDQYIH 88 (451)
T ss_pred cCCCCCHHHHHHHHHHhhcccccc--CCCceEEeccccEEEeCCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHHhccC
Confidence 466789999999998887655322 237899999999999999999999999999999999999999999999998766
Q ss_pred ccc-ccCChHHHHHHHHHHhhCCCCC-CEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccC-CCC
Q 011777 131 ATT-IYLHHAIADFAEALASKMPGNL-KVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTAL-NTW 207 (477)
Q Consensus 131 ~~~-~~~~~~~~~l~~~La~~~~~~~-~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~-~~~ 207 (477)
... .+.++...+|+++|++.+|... ++|+|+||||||||+|||+||.+++|.+||+++++|||++.+++++++. ..+
T Consensus 89 ~~~~~~~~~~~~~la~~L~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~ 168 (451)
T PRK06918 89 TGFNVMMYEPYIELAEKLAALAPGSFDKKVLFLNSGAEAVENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPY 168 (451)
T ss_pred ccccccccHHHHHHHHHHHHhCCCCCCCEEEEcCCcHHHHHHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccc
Confidence 533 3568889999999999998655 5999999999999999999999999999999999999999999988764 223
Q ss_pred CCCCC--CCCeeeecCCCCcCCCCCCCHH----HHHHHHHHHHh-ccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHH
Q 011777 208 KYPIP--QGEIHHVVNPDPYHGSFGSDAA----RYAQDLQDHID-FGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDI 280 (477)
Q Consensus 208 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~----~~~~~le~~i~-~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l 280 (477)
+..+. .+++.+++.|+.++++.+.... .+++.+++++. ..+++++++||+||+|+++|.++++++|+++|+++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l 248 (451)
T PRK06918 169 KFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNI 248 (451)
T ss_pred cccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHHHHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHH
Confidence 32222 2467777888777665543221 12345666553 22457899999999999999999999999999999
Q ss_pred HHHhCcEEEEcCcccCccCCCCCCccccccCCCcceeeecccccCccceEEEEeCHHHHHhhcccccccCCCCcHHHHHH
Q 011777 281 VRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIGNGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAG 360 (477)
Q Consensus 281 ~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aa 360 (477)
|++||++||+||||+||||+| .+++++++++.||+++|||++++|+|+||+++++++++.+....+.+||++||++|++
T Consensus 249 ~~~~gillI~DEV~tg~gr~g-~~~a~~~~~v~pDi~t~sK~l~~G~pig~v~~~~~i~~~~~~~~~~~T~~g~~l~~aa 327 (451)
T PRK06918 249 CSEHGILFVADEIQTGFARTG-KYFAIEHFDVVPDLITVSKSLGAGVPISGVIGRKEIMDESAPGELGGTYAGSPLGCAA 327 (451)
T ss_pred HHHcCCEEEEeccccCcCccC-ceehhHhcCCCCCEEeeehhhcCCCccEEEEEcHHHHhccCCCCcCcCCCcCHHHHHH
Confidence 999999999999999999999 6888899999999999999999999999999999999988777788999999999999
Q ss_pred HHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCcee
Q 011777 361 GLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLV 440 (477)
Q Consensus 361 a~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v 440 (477)
+.++|+.++++++.+++++++++++++|+++.++++.+.++++.|+|+++++..+...+.|+......+.+.|+++||++
T Consensus 328 a~a~l~~i~~~~~~~~~~~~g~~l~~~l~~l~~~~~~~~~vrg~G~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gvlv 407 (451)
T PRK06918 328 ALAVLDIIEKENLNDRAIELGKVVMNRFEEMKNKYNCIGDVRGLGAMCAFELVQDRKTKEPDKTLTANICKEANKRGLLL 407 (451)
T ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhCCCceeeccceeEEEEEEccCCCcCCCcHHHHHHHHHHHHHCCeEE
Confidence 99999999888999999999999999999998888888999999999999997544344455556778889999999999
Q ss_pred eccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 441 GKGGLHGNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 441 ~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
.+++.+++++||+||+++++++|++++++|++++++
T Consensus 408 ~~~~~~~~~lrl~p~l~~t~~~id~~l~~l~~~l~~ 443 (451)
T PRK06918 408 LSAGTYGNVIRVLMPLVITDEQLEEGLTIIEESLQA 443 (451)
T ss_pred eecCCCCCEEEEECCCccCHHHHHHHHHHHHHHHHH
Confidence 987766799999999999999999999999999864
No 34
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=7.5e-73 Score=518.04 Aligned_cols=394 Identities=30% Similarity=0.516 Sum_probs=344.5
Q ss_pred CCCHHHHHHHHhhhcCCCccccccCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhcccccc
Q 011777 54 GPSADQVFQKRKQFLGPSIFHYYQKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATT 133 (477)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~ 133 (477)
+-.+++.+++..++-.. ++.+.|+++++++|+++||++|++|+||.+++++++-|||||.|++++++|.+++..++.
T Consensus 20 ~~aS~~~~~~E~k~~ah---nyhpLpvvf~ka~g~~vwD~eGk~ylDflsaysaVnqGhchpki~~aLqeq~~kLtlssr 96 (427)
T KOG1402|consen 20 TTASQQIMERENKYGAH---NYHPLPVVFSKAKGSRVWDPEGKEYLDFLSAYSAVNQGHCHPKIIKALQEQADKLTLSSR 96 (427)
T ss_pred ccchhhhhchhhhcccc---cCCcCceEEEecCCcEEECCCccchhhhhhhhhhcccCCCCHHHHHHHHHHHhHhhhhhH
Confidence 33456677777776543 356779999999999999999999999999999999999999999999999999877666
Q ss_pred ccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhcc--------CCceEEEEccCccCCcccccccccCC
Q 011777 134 IYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLST--------GNLGMIALRNAYHGGSSGTIGLTALN 205 (477)
Q Consensus 134 ~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~--------~~~~ii~~~~~yhG~~~~~~~~~~~~ 205 (477)
.+.+....++++.++++++ .+.|+-+|+|.||+|.|+|+||.+. .+.+|++..++|||++.++++++..+
T Consensus 97 afYnd~~~~f~~~vt~lf~--~~kvlpmnTGaEa~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ 174 (427)
T KOG1402|consen 97 AFYNDVLGEFAEYVTKLFG--YDKVLPMNTGAEAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDP 174 (427)
T ss_pred HHhhhhHHHHHHHHHHhcC--cceeeecccchhHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCc
Confidence 6778889999999999995 5789999999999999999999642 23468889999999999999998765
Q ss_pred -CCC-CCCCCCC-eeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHH
Q 011777 206 -TWK-YPIPQGE-IHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVR 282 (477)
Q Consensus 206 -~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~ 282 (477)
.|. +....++ +..++ +++ +++|+.+++ .+.+++||+|||||++|+++||++||+++++||+
T Consensus 175 ds~~~fgp~~P~~~~~v~--------Y~d-----~eale~~l~---~~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCt 238 (427)
T KOG1402|consen 175 DSWDGFGPFLPGVVDKVP--------YGD-----AEALEVALK---SPNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCT 238 (427)
T ss_pred chhhccCCCCCCcceeec--------cCC-----HHHHHHHhc---CCCeeEEEeeccccccceEeCCchhHHHHHHHHH
Confidence 222 1111234 44443 332 688999887 4789999999999999999999999999999999
Q ss_pred HhCcEEEEcCcccCccCCCCCCccccccCCCcceeeecccccCc-cceEEEEeCHHHHHhhcccccccCCCCcHHHHHHH
Q 011777 283 KAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIGNG-LPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGG 361 (477)
Q Consensus 283 ~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg~G-~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa 361 (477)
+|++++|.||||||++||| ++|++++..+.||++.|+|+++|| +|++++++++++|..+.+..|++||++||++++++
T Consensus 239 kynvl~I~DEvQTGl~RTG-k~la~d~env~PDivilgKalSGG~~Pvsavl~~~~im~~~~pgeHgsTyggNpLg~~va 317 (427)
T KOG1402|consen 239 KYNVLLIADEVQTGLARTG-KLLACDYENVRPDIVILGKALSGGVYPVSAVLADDDIMLNIKPGEHGSTYGGNPLGCAVA 317 (427)
T ss_pred hhcEEEEehhhhhcccccC-cEEEeehhhcCCCeEEEeccccCCeeeeEEEEecHHHHhccCCCccccccCCChHHHHHH
Confidence 9999999999999999999 899999999999999999999999 79999999999999999999999999999999999
Q ss_pred HHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCC-CceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCcee
Q 011777 362 LAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHD-IIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLV 440 (477)
Q Consensus 362 ~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~-~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v 440 (477)
.|+|+++.++++.++.+.+|..++.+|+++..+.| ++..+||+|++.++++...+. ...++..++-.|+++|++.
T Consensus 318 iAalevi~eekL~era~~lG~~l~~~L~~l~~~~p~~v~~VRGrGl~~ai~i~~~~~----~~~~aw~~cl~lk~~g~LA 393 (427)
T KOG1402|consen 318 IAALEVIVEEKLVERAAKLGEILRDQLNKLQKKFPHVVKEVRGRGLLNAIVINPSKT----SGQDAWDVCLALKENGLLA 393 (427)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhheeeccceEEEEEeccccc----cchhHHHHHHccccccccc
Confidence 99999999999999999999999999999988875 578999999999999964321 2234567888899999998
Q ss_pred eccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHHHh
Q 011777 441 GKGGLHGNVFRIKPPMCFTKDDADFLVDALDYSMS 475 (477)
Q Consensus 441 ~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~ 475 (477)
.|. +++.|||.||++++++|+++.++++++++.
T Consensus 394 kpt--H~~IiRfaPPL~I~e~dl~eg~e~i~k~i~ 426 (427)
T KOG1402|consen 394 KPT--HGNIIRFAPPLVISEEDLREGIEAIEKTIA 426 (427)
T ss_pred CCC--CCCeEEecCCcccCHHHHHHHHHHHHHHhc
Confidence 874 588999999999999999999999998864
No 35
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-71 Score=568.34 Aligned_cols=417 Identities=36% Similarity=0.562 Sum_probs=358.9
Q ss_pred CCCCCCHHHHHHHHhhhcCCCccccccCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhccc
Q 011777 51 PYTGPSADQVFQKRKQFLGPSIFHYYQKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQH 130 (477)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~ 130 (477)
..+.|++++++++.++++++... ...|+++++|+|+||||.|||+||||.+|++++++||+||+|++|+.+|++++.+
T Consensus 11 ~~~~~~s~~l~~~~~~~~~~~~~--~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~ 88 (441)
T PRK05769 11 ELPGPKAREIIERDEKYLAQSTR--RWYPLVIERGEGVWVEDVDGNVYLDFNAGIAVTNVGHAHPKVVKAVKEQAEKFLH 88 (441)
T ss_pred cCCCccHHHHHHHHHHhhCcccc--cCCCeeEEecceEEEEeCCCCEEEECCCchhhcccCCCCHHHHHHHHHHHHhccC
Confidence 36678899998887777765422 2358999999999999999999999999999999999999999999999998766
Q ss_pred ccc-ccCChHHHHHHHHHHhhCCCC-CCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCC-CC
Q 011777 131 ATT-IYLHHAIADFAEALASKMPGN-LKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALN-TW 207 (477)
Q Consensus 131 ~~~-~~~~~~~~~l~~~La~~~~~~-~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~-~~ 207 (477)
... .+.++...+|+++|++.+|.+ .++|+|+||||||||.|+|+||.+++|.+||.++++|||++.++++.++.. .+
T Consensus 89 ~~~~~~~~~~~~~lAe~L~~~~p~~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~ 168 (441)
T PRK05769 89 YSLTDFYYEPAVELAERLVEIAPGGFEKKVFFTNSGTESNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQ 168 (441)
T ss_pred ccCcccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCccc
Confidence 443 356888999999999999753 579999999999999999999999999999999999999999999887532 22
Q ss_pred CCCC--CCCCeeeecCCCCcCCCCC-CCHH----HHHHHHHH-HHhc-cCCCCeeEEEecccCCCCCeeeCCchhHHHHH
Q 011777 208 KYPI--PQGEIHHVVNPDPYHGSFG-SDAA----RYAQDLQD-HIDF-GTSGKVAGFIAETIQGVGGAVELAPGYLKLVY 278 (477)
Q Consensus 208 ~~~~--~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~le~-~i~~-~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~ 278 (477)
+..+ ..+++.+++.|+.++++++ .+.. .+++.+++ +++. .+++++++||+||+++++|+++|+++||++|+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~ 248 (441)
T PRK05769 169 RKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELR 248 (441)
T ss_pred ccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHH
Confidence 2222 1257888888888888876 3322 24555777 3332 23578999999999999999999999999999
Q ss_pred HHHHHhCcEEEEcCcccCccCCCCCCccccccCCCcceeeecccccCccceEEEEeCHHHHHhhcccccccCCCCcHHHH
Q 011777 279 DIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIGNGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCS 358 (477)
Q Consensus 279 ~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~ 358 (477)
++|++||+++|+||||+||||+| .+|+++++++.||+++|||++++|+|+|++++++++++.+ ...+++||++||++|
T Consensus 249 ~l~~~~g~lli~DEv~tG~gr~G-~~~a~~~~gv~pDivt~~K~l~~G~p~gav~~~~~i~~~~-~~~~~~T~~g~p~~~ 326 (441)
T PRK05769 249 KLADKYGILLIDDEVQTGMGRTG-KMFAIEHFGVEPDIITLAKAIAGGLPLGAVIGRAELMFLP-PGSHANTFGGNPVAA 326 (441)
T ss_pred HHHHHcCCEEEEechhhCCCccc-ceehhhccCCCCCEEEEcccccCCcccEEEEEehhhhhcC-CCCCCCCCCcCHHHH
Confidence 99999999999999999999999 7888899999999999999999999999999999998644 346889999999999
Q ss_pred HHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCc
Q 011777 359 AGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGV 438 (477)
Q Consensus 359 aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv 438 (477)
++++++|+++++ ++++++++++++|+++|+++..+++.+.+++|.|+|+++++..+. +.++......+.+.|+++||
T Consensus 327 aaa~a~L~~l~~-~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~--~~~~~~~~~~~~~~~~~~Gi 403 (441)
T PRK05769 327 AAALATLEELEE-GLLENAQKLGEYLRKELKELKEKYEFIGDVRGLGLMIGVELVKDR--KEPDPKLRDKVLYEAFKRGL 403 (441)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCCCeeeeecceEEEEEEeccCC--ccccHHHHHHHHHHHHhCCc
Confidence 999999999988 999999999999999999998889999999999999999997543 23444456778899999999
Q ss_pred eeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 439 LVGKGGLHGNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 439 ~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
++.+.+ .+.+||+||+++|++|||+++++|++++.+
T Consensus 404 l~~~~~--~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 439 (441)
T PRK05769 404 LLLGAG--KSAIRIIPPLIITEEEADIGLEILEEAIKE 439 (441)
T ss_pred EEecCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 997654 478999999999999999999999999875
No 36
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=9.4e-71 Score=559.83 Aligned_cols=412 Identities=30% Similarity=0.429 Sum_probs=352.5
Q ss_pred HHHHHHHHhhhcCCCccccccCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhcccccc-cc
Q 011777 57 ADQVFQKRKQFLGPSIFHYYQKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATT-IY 135 (477)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~-~~ 135 (477)
+.+++++..++++..... ..|+++++|+|+||||.|||+||||.+|++++++||+||+|++|+++|++++.+... .+
T Consensus 3 ~~~~~~~~~~~~~~~~~~--~~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~ 80 (421)
T PRK06777 3 NSELNQRRLEATPRGVGV--MCDFYAERAENATLWDVEGREYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQFTHTAYQIV 80 (421)
T ss_pred hHHHHHHHHHhcccccCc--CCCeeEEeeecCEEEeCCCCEEEEcccCHHhhccCCCCHHHHHHHHHHHhhccccccccc
Confidence 456677766666544332 238999999999999999999999999999999999999999999999998765433 34
Q ss_pred CChHHHHHHHHHHhhCCC-CCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCC-CCCCCCC-
Q 011777 136 LHHAIADFAEALASKMPG-NLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALN-TWKYPIP- 212 (477)
Q Consensus 136 ~~~~~~~l~~~La~~~~~-~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~-~~~~~~~- 212 (477)
.++...+|+++|++..|. +.++++|+||||||+|.|+|+||.+++|.+||.|+++|||++.+++++++.. .++....
T Consensus 81 ~~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~ 160 (421)
T PRK06777 81 PYASYVTLAERINALAPIDGPAKTAFFTTGAEAVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGP 160 (421)
T ss_pred CChHHHHHHHHHHHhCCCCCCceEEEeCCcHHHHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCC
Confidence 678889999999999874 4679999999999999999999999999999999999999999999987642 2332221
Q ss_pred -CCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhc-cCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEE
Q 011777 213 -QGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDF-GTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIA 290 (477)
Q Consensus 213 -~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~-~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~ 290 (477)
..++.+++.|+.+++ .....++++++++++. .+++++++||+||+++++|+.+++++||++|+++|++||+++|+
T Consensus 161 ~~~~~~~~~~p~~~~~---~~~~~~~~~l~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~ 237 (421)
T PRK06777 161 FPGSIFHALYPNELHG---VSVEEALSSVERLFKADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIA 237 (421)
T ss_pred CCCCcEEcCCCccccC---cCHHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 245666666654432 1233446678887763 24578999999999999999999999999999999999999999
Q ss_pred cCcccCccCCCCCCccccccCCCcceeeecccccCccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhch
Q 011777 291 DEVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIGNGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDK 370 (477)
Q Consensus 291 DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~ 370 (477)
||||+||||+| .+|+++++++.||++|+||++++|+|+|++++++++++.+....+.+||++||++|++++++|+.+++
T Consensus 238 DEv~tg~gr~g-~~~~~~~~~~~pDiv~~sK~l~~G~pigav~~~~~i~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~ 316 (421)
T PRK06777 238 DEVQTGFARTG-KLFAMEYYDVKPDLITMAKSLGGGMPISAVVGRAEVMDAPAPGGLGGTYAGNPLAVAAALAVLDVIAE 316 (421)
T ss_pred echhhCCccCC-chhhhhhcCCCCCEEeeehhhcCCCceEEEEEcHHHHhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh
Confidence 99999999999 78888999999999999999999999999999999999888777889999999999999999999988
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCCCCEE
Q 011777 371 ERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLHGNVF 450 (477)
Q Consensus 371 ~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~i 450 (477)
+++.+++++++++++++|+++..+++.+.+++|.|+|+++++..+. ...+.......+.+.++++||++.+++.+++++
T Consensus 317 ~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~~i~~~~~~-~~~~~~~~~~~l~~~~~~~Gv~i~~~~~~g~~l 395 (421)
T PRK06777 317 EKLCQRALILGAHLVEVLEKAKASCPAIVDIRARGSMVAVEFNDPQ-TGKPSPEFTRQYQRQALEEGLLLLSCGVHGNVI 395 (421)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCceEEEEEEEecCc-cCCccHHHHHHHHHHHHhCCeEEeecCCCCCEE
Confidence 8999999999999999999998888999999999999999986432 222344456678888999999999987778899
Q ss_pred EEeCCCCCcHHHHHHHHHHHHHHHh
Q 011777 451 RIKPPMCFTKDDADFLVDALDYSMS 475 (477)
Q Consensus 451 Ri~p~~~~t~e~i~~~l~~l~~~l~ 475 (477)
||.||++++++++++++++|++++.
T Consensus 396 r~~ppl~i~~~~i~~~~~~l~~~l~ 420 (421)
T PRK06777 396 RFLYPLTIPDAQFSKALNILTRLLA 420 (421)
T ss_pred EEeCCCCCCHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999875
No 37
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-70 Score=560.91 Aligned_cols=417 Identities=31% Similarity=0.495 Sum_probs=359.0
Q ss_pred CHHHHHHHHhhhcCCCccccccCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccc-
Q 011777 56 SADQVFQKRKQFLGPSIFHYYQKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTI- 134 (477)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~- 134 (477)
++.+++++..+++.+.... ...|+++++|+|+||||.|||+||||.+|++++++||+||+|++|+.+|++++.+....
T Consensus 2 ~~~~~~~~~~~~~~~~~~~-~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~ 80 (443)
T PRK08360 2 KPLEIIERYSKVISPANRV-TYYPLVPVKAENAKVWDIEGNEYIDFLSDAAVQNVGHNNPRVVKAIKEQTDKLIHYTPIY 80 (443)
T ss_pred CHHHHHHHHHHhccccccc-ccCCceEEecceeEEEECCCCEEEEccccHhhcccCCCCHHHHHHHHHHHHhccCccccc
Confidence 4567888888886654311 13489999999999999999999999999999999999999999999999987665443
Q ss_pred cCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCC-CCCCCCC-
Q 011777 135 YLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALN-TWKYPIP- 212 (477)
Q Consensus 135 ~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~-~~~~~~~- 212 (477)
+.++...+|+++|++.+|...++|+|+||||||||.|||+||.+++|.+|+.+.++|||++.+++++++.. .++..+.
T Consensus 81 ~~~~~~~~la~~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~ 160 (443)
T PRK08360 81 GFPVEPLLLAEKLIEIAPGDNPKVSFGLSGSDANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGE 160 (443)
T ss_pred cCcHHHHHHHHHHHHhCCCCCCEEEEcCCHHHHHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCC
Confidence 44788899999999999877789999999999999999999999999999999999999999998887632 2222111
Q ss_pred CCCeeeecCCCCcCCCCCCCHH----HHHHHHHHHHhcc-CCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcE
Q 011777 213 QGEIHHVVNPDPYHGSFGSDAA----RYAQDLQDHIDFG-TSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGV 287 (477)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~le~~i~~~-~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gil 287 (477)
.+++.++++|+.++.++..+.. .+++.++++++.. +.+++++||+||+||++|.+.++++|+++|+++|++||++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~l 240 (443)
T PRK08360 161 LSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGIL 240 (443)
T ss_pred CCCcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCE
Confidence 3567888888887766643211 2355567777532 3478999999999999999999999999999999999999
Q ss_pred EEEcCcccCccCCCCCCccccccCCCcceeeecccccCccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHh
Q 011777 288 CIADEVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIGNGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRV 367 (477)
Q Consensus 288 lI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~ 367 (477)
+|+||||+||||+| .+|+++++++.||++|+||++++|+|+|++++++++++.+....+.+|+++||++|++++++|+.
T Consensus 241 lI~DEv~~g~gr~G-~~~a~~~~~~~pDiitlsK~l~~G~pigav~~~~~i~~~~~~~~~~~T~~~~p~~~aaa~a~l~~ 319 (443)
T PRK08360 241 LVVDEVQSGLGRTG-KWFAIEHFGVEPDIITLGKPLGGGLPISATIGRAEIMDSLPPLAHAFTLSGNPVASAAALAVIEE 319 (443)
T ss_pred EEEeccccCCCcCc-cchhhhhcCCCCCEEEecccccCCceeEEEEEcHHHHhhhcCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 99999999999999 68888888999999999999999999999999999999987767889999999999999999999
Q ss_pred hchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCCC
Q 011777 368 IDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLHG 447 (477)
Q Consensus 368 l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~ 447 (477)
++++++.+++++++++++++|+++..+++.+.+++|.|+|+++++.++..++.++...+..+.+.|+++|+++.+.. +
T Consensus 320 l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrg~Gl~~gie~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~--~ 397 (443)
T PRK08360 320 IEEKNLLKRAEKLGNYTKKRLEEMKKKHELIGDVRGIGLMIGVDLVKDRETKERAYEEAAKVVWRAWELGLIVTFFS--G 397 (443)
T ss_pred HHHcCHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEEecCCcccCccHHHHHHHHHHHHHCCeEEeecC--C
Confidence 98889999999999999999999988899999999999999999986554444554556788899999999987543 6
Q ss_pred CEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 448 NVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 448 ~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
+.+||+||+++|++||++++++|++++++
T Consensus 398 ~~lr~~P~l~~t~~~id~~~~~l~~~l~~ 426 (443)
T PRK08360 398 NVLRIQPPLTIEKEVLDEGLDILEEAIED 426 (443)
T ss_pred CEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999864
No 38
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-70 Score=563.07 Aligned_cols=416 Identities=36% Similarity=0.566 Sum_probs=356.8
Q ss_pred HHHHHHHHhhhcCCCccccccCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccc-ccc
Q 011777 57 ADQVFQKRKQFLGPSIFHYYQKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHAT-TIY 135 (477)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~-~~~ 135 (477)
..+++++..+++.+.....+ .|+++++++|+|+||.|||+||||.+|+++++|||+||+|++|+.+|++++.+.. ..+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~q~~~~~~~~~~~~ 83 (433)
T PRK08117 5 WSDLVERYPQLLAPALAKDH-PNLPVVKGEGCYYYGVDGKEYLDFTSGIAVANVGHRHPKVVQAIKEQADKLMHGPSGVI 83 (433)
T ss_pred HHHHHHHHHHHhhhhccccC-CCceEEeeeeeEEEeCCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccCcccccc
Confidence 46777777776655432222 2489999999999999999999999999999999999999999999999876654 345
Q ss_pred CChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccC-CCCCCCC-C-
Q 011777 136 LHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTAL-NTWKYPI-P- 212 (477)
Q Consensus 136 ~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~-~~~~~~~-~- 212 (477)
.++...+|+++|++++|...++++|+|||+|||+.|||+||.+++|.+||+++++|||++.+++++++. ..++... +
T Consensus 84 ~~~~~~~la~~L~~~~~~~~~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~ 163 (433)
T PRK08117 84 YYESILKLAEELAEITPGGLDCFFFSNSGAEAIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPL 163 (433)
T ss_pred CCHHHHHHHHHHHHhCCCCCCEEEEeCcHHHHHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCC
Confidence 678899999999999977778999999999999999999999999999999999999999999887653 2222221 1
Q ss_pred CCCeeeecCCCCcCCCCCCCHH----HHHHHHHHHHhc-cCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcE
Q 011777 213 QGEIHHVVNPDPYHGSFGSDAA----RYAQDLQDHIDF-GTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGV 287 (477)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~le~~i~~-~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gil 287 (477)
.+++.+++.|+.++++...+.. .++++++++++. ..++++++||+||+++++|++.++++||++|+++|++||++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~l 243 (433)
T PRK08117 164 LGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGIL 243 (433)
T ss_pred CCCcEEeCCCccccccccCchhHHHHHHHHHHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCE
Confidence 3577888888877765543222 245677777763 23468999999999999999999999999999999999999
Q ss_pred EEEcCcccCccCCCCCCccccccCCCcceeeecccccCccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHh
Q 011777 288 CIADEVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIGNGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRV 367 (477)
Q Consensus 288 lI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~ 367 (477)
||+||||+||||+| .+|+++++++.||++||||++++|+|+|++++++++++.+....+++||++||+++++++++|+.
T Consensus 244 lI~DEv~tG~gr~G-~~~~~~~~gv~pDi~t~sK~lg~G~pigav~~~~~i~~~~~~~~~~~T~~~np~~~aaa~a~L~~ 322 (433)
T PRK08117 244 LIFDEVQTGFGRTG-EWFAAQTFGVVPDIMTIAKGIASGLPLSAVVASKELMEQWPLGSHGTTFGGNPVACAAALATLEV 322 (433)
T ss_pred EEEecchhccCccc-cchhHhhcCCCCCEeehhhhccCCCcceeEEEcHHHHhhccCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 99999999999999 78888889999999999999999999999999999999887667889999999999999999999
Q ss_pred hchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCCC
Q 011777 368 IDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLHG 447 (477)
Q Consensus 368 l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~ 447 (477)
++++++++++++++++++++|.++..+++.+.++++.|+|+++++..+. +.++......+.+.|+++||++.+.+..+
T Consensus 323 l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~Gl~~gi~~~~~~--~~~~~~~~~~~~~~l~~~Gv~~~~~g~~~ 400 (433)
T PRK08117 323 IKEEKLLDNANEMGAYALERLEVLKEKHPVIGDVRGIGLMIGIEIVDPD--GEPDGDAVEKILDKCLEKGLLFYLCGNAG 400 (433)
T ss_pred HHhccHHHHHHHHHHHHHHHHHHHHhcCCceeeeecCCcEEEEEEecCC--CCcchHHHHHHHHHHHHCCCEEeecCCCC
Confidence 9888999999999999999999998888988999999999999997543 23444456778899999999998765556
Q ss_pred CEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 448 NVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 448 ~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
+++||+||+++|+++|++++++|++++++
T Consensus 401 ~~lRl~p~~~~t~~~i~~~~~~l~~~l~~ 429 (433)
T PRK08117 401 NVLRMIPPLTVTKEEIDEGLDILDEALTE 429 (433)
T ss_pred CEEEEeCCccCCHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999865
No 39
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=100.00 E-value=1.2e-70 Score=560.14 Aligned_cols=397 Identities=31% Similarity=0.449 Sum_probs=346.5
Q ss_pred cCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhcccccc-ccCChHHHHHHHHHHhhCCC-C
Q 011777 77 QKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATT-IYLHHAIADFAEALASKMPG-N 154 (477)
Q Consensus 77 ~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~-~~~~~~~~~l~~~La~~~~~-~ 154 (477)
+.|+++++|+|+||||.|||+||||.+|++++++||+||+|++|+.+|++++.+... .+.++...+++++|++.+|. +
T Consensus 14 ~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~ 93 (420)
T TIGR00700 14 TLPVFAARAEGAILEDVDGNRLIDFASGIAVLNIGHSHPRVVDAVRTQVAEFTHTCFMVTPYEGYVALAEKLNRIAPGSG 93 (420)
T ss_pred CCCeeEEeeeeeEEEeCCCCEEEECccCHHhccCCCCCHHHHHHHHHHHHhccCccccccCChHHHHHHHHHHHhCCCCC
Confidence 458999999999999999999999999999999999999999999999998765443 25577889999999999974 4
Q ss_pred CCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCC-CCCCCCC--CCCeeeecCCCCcCCCCCC
Q 011777 155 LKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALN-TWKYPIP--QGEIHHVVNPDPYHGSFGS 231 (477)
Q Consensus 155 ~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~ 231 (477)
.++|+|++|||||+|.|+|+||.++||.+||+++++|||++.+++++++.. .++..+. .+++.+++.|++++.+.+.
T Consensus 94 ~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (420)
T TIGR00700 94 PKKSVFFNSGAEAVENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLD 173 (420)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccc
Confidence 579999999999999999999999999999999999999999999887642 2332221 2467778888777654321
Q ss_pred C---HHHHHHHHHHHHh-ccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccc
Q 011777 232 D---AARYAQDLQDHID-FGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGF 307 (477)
Q Consensus 232 ~---~~~~~~~le~~i~-~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~ 307 (477)
. ...+++.+++++. ..+++++|+||+||+|+++|+++++++|+++|+++|++||++||+||||+||||+| .+|++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g-~~~a~ 252 (420)
T TIGR00700 174 KQLSTDGELAAARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTG-AMFAC 252 (420)
T ss_pred cchhHHHHHHHHHHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccc-hhHHH
Confidence 1 1223566777664 23457899999999999999999999999999999999999999999999999999 68888
Q ss_pred cccCCCcceeeecccccCccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHH
Q 011777 308 ETQGVIPDIVTMAKGIGNGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGR 387 (477)
Q Consensus 308 ~~~gv~pDivt~sK~lg~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~ 387 (477)
+++++.||+++|||++++|+|+|++++++++++.+....+.+||++||++|++++++|+.++++++.+++++++++++++
T Consensus 253 ~~~~~~pDi~~lsK~l~~G~pig~v~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~ 332 (420)
T TIGR00700 253 EHEGPEPDLITTAKSLADGLPLSGVTGRAEIMDAPAPGGLGGTYAGNPLACAAALAVLAIIESEGLIERARQIGRLVTDR 332 (420)
T ss_pred hhcCCCCCEEEeeccccCCcceEEEEecHHHHhhcCCCCcCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999988777788999999999999999999998889999999999999999
Q ss_pred HHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHHHH
Q 011777 388 LRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADFLV 467 (477)
Q Consensus 388 L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l 467 (477)
|+++.++++.+.++++.|+|+++++.++ ....|+......+.+.|+++||++.|++.+++++||+||+++++++|++++
T Consensus 333 L~~l~~~~~~~~~vrg~G~~~~i~~~~~-~~~~~~~~~~~~l~~~~~~~Gv~i~p~~~f~~~lRl~p~l~~~~~~l~~~~ 411 (420)
T TIGR00700 333 LTTLKAVDPRIGDVRGLGAMIAVELVDP-GTTEPDAGLAERIATAAHAAGLLLLTCGMFGNIIRFLPPLTIGDELLSEGL 411 (420)
T ss_pred HHHHHhhCCCEEEeeccceEEEEEEecC-CCCCccHHHHHHHHHHHHHCCeEEeccCCCCCEEEEECCCCcCHHHHHHHH
Confidence 9999888888899999999999999643 223355556678888999999999998777899999999999999999999
Q ss_pred HHHHHHHh
Q 011777 468 DALDYSMS 475 (477)
Q Consensus 468 ~~l~~~l~ 475 (477)
++|+++++
T Consensus 412 ~~l~~~l~ 419 (420)
T TIGR00700 412 DILCAILA 419 (420)
T ss_pred HHHHHHhh
Confidence 99999875
No 40
>PRK06149 hypothetical protein; Provisional
Probab=100.00 E-value=1.2e-70 Score=607.76 Aligned_cols=421 Identities=42% Similarity=0.718 Sum_probs=366.5
Q ss_pred CCCCHHHHHHHHhhhcCCCccccccCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccc
Q 011777 53 TGPSADQVFQKRKQFLGPSIFHYYQKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHAT 132 (477)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~ 132 (477)
+.+++.++++++++++.+....+++.|+.+++|+|+|+||.|||+||||.+|+ .++||+||+|++|+.+|+.++.+.
T Consensus 542 ~~~~~~~l~~~~~~~~~~~~~~~~~~p~~i~~g~G~~l~D~dG~~ylD~~~~~--~~lGh~hp~v~~Ai~~q~~~l~~~- 618 (972)
T PRK06149 542 PPPDAAALLARRDASFARVQKHYYADPPQIERGWRHHLFDMAGRSYLDMVNNV--TVLGHGHPRLAAAAARQWSLLNTN- 618 (972)
T ss_pred CCCCHHHHHHHHHHhhccchhhcccCCCeEEEeeeeEEEeCCCCEEEECCCCc--cccCCCCHHHHHHHHHHHHhcccc-
Confidence 44678899999999887765556677899999999999999999999999886 379999999999999999987543
Q ss_pred cccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCC---
Q 011777 133 TIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKY--- 209 (477)
Q Consensus 133 ~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~--- 209 (477)
+.+.++...+|+++|++.+|.+.++++|+|||+|||+.|||+||.++||.+||+++++|||++.+++++++......
T Consensus 619 ~~~~~~~~~elae~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~ 698 (972)
T PRK06149 619 SRFHYAAVAEFSERLAALAPDGLDTVFLVNSGSEANDLAIRLAWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQAL 698 (972)
T ss_pred ccccCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHhcCCCeEEEEeCCCCCcChhHhhhcCCcccccccc
Confidence 34567889999999999998778899999999999999999999999999999999999999999877754321111
Q ss_pred CCCCCCeeeecCCCCcCCCCCCC--HHHHHHHHHHHHhc--cCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhC
Q 011777 210 PIPQGEIHHVVNPDPYHGSFGSD--AARYAQDLQDHIDF--GTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAG 285 (477)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~le~~i~~--~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~g 285 (477)
.....++..++.|+.++++|+.+ ...|.+++++.++. .+.+++++||+||++|++|+++++++||++|+++|++||
T Consensus 699 ~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g 778 (972)
T PRK06149 699 ETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARG 778 (972)
T ss_pred CCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcC
Confidence 11123667788888888888643 34566676666642 235689999999999999999999999999999999999
Q ss_pred cEEEEcCcccCccCCCCCCccccccCCCcceeeecccccCccceEEEEeCHHHHHhhcc-cccccCCCCcHHHHHHHHHH
Q 011777 286 GVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIGNGLPLGAVVTTPEIANVMAQ-KIQFNTFGGNPVCSAGGLAV 364 (477)
Q Consensus 286 illI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pig~v~~~~~~~~~~~~-~~~~~t~~~~~~~~aaa~a~ 364 (477)
+++|+|||||||||+|..+|+++++|+.|||+||||++|||+|+|++++++++++.+.. ..+++|+++||++|++++++
T Consensus 779 ~llI~DEV~tGfGRtG~~~~a~e~~gv~PDivt~gK~lg~G~Pl~av~~~~~i~~~~~~~~~~~sT~~gnP~~~aaala~ 858 (972)
T PRK06149 779 GVCIADEVQVGYGRLGHYFWGFEQQGVVPDIITMAKGMGNGHPLGAVITRREIAEALEAEGYFFSSTGGSPVSCRIGMAV 858 (972)
T ss_pred CEEEEEeehhcCCccCccchhhhhcCCCCCEEEecccccCCeeeEEEEEcHHHHhhhccCCcccCCCCCCHHHHHHHHHH
Confidence 99999999999999994478999999999999999999999999999999999998864 34567899999999999999
Q ss_pred HHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccC
Q 011777 365 LRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGG 444 (477)
Q Consensus 365 l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~ 444 (477)
|++++++++++++++++++|+++|+++..+++++.++||.|+|+++++..+..++.+.......+.+.|+++||++.+.+
T Consensus 859 L~~i~~e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~l~~~Gvl~~~~g 938 (972)
T PRK06149 859 LDVLREEKLQENARRVGDHLKARLEALADRHPLIGAVHGMGLYLGVELVRDRQTLEPATEETAAICDRLLELGVIMQPTG 938 (972)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeecceEEEEEEecCcccCCCChHHHHHHHHHHHhCCeEEeecC
Confidence 99999999999999999999999999999999999999999999999986655555665667789999999999999877
Q ss_pred CCCCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 445 LHGNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 445 ~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
...+++||.||+++|++|||+++++|++++.+
T Consensus 939 ~~~~vl~~~Ppl~it~~~id~~~~~l~~~l~~ 970 (972)
T PRK06149 939 DHLNILKIKPPLCLDRESADFFVDMLDRVLTE 970 (972)
T ss_pred CCCCEEEEECCCcCCHHHHHHHHHHHHHHHHh
Confidence 66799999999999999999999999999865
No 41
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=100.00 E-value=4.9e-70 Score=554.55 Aligned_cols=410 Identities=29% Similarity=0.397 Sum_probs=349.1
Q ss_pred HHHHHHhhhcCCCccccccCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhcccccc-ccCC
Q 011777 59 QVFQKRKQFLGPSIFHYYQKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATT-IYLH 137 (477)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~-~~~~ 137 (477)
+++++...++.+.... ..|+++++|+|+||||.|||+||||.+|++++++||+||+|++|+.+|++++.+... .+.+
T Consensus 5 ~~~~~~~~~~~~~~~~--~~~~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~ 82 (421)
T PRK09792 5 EFHQRRLSATPRGVGV--MCNFFAQSAENATLKDVEGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFTHTAYQIVPY 82 (421)
T ss_pred HHHHHHHhhccccccc--CCCeeEEeccccEEEeCCCCEEEEccCchhhhcCCCCCHHHHHHHHHHHHhccCcccCccCC
Confidence 4555544444333222 236899999999999999999999999999999999999999999999998765433 3567
Q ss_pred hHHHHHHHHHHhhCCC-CCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCC-CCCCCCC--C
Q 011777 138 HAIADFAEALASKMPG-NLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALN-TWKYPIP--Q 213 (477)
Q Consensus 138 ~~~~~l~~~La~~~~~-~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~-~~~~~~~--~ 213 (477)
+...+|+++|++..|. +.++++|++|||||||.|+|+||.++||.+||+++++|||++.++++.++.. .++..+. .
T Consensus 83 ~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~ 162 (421)
T PRK09792 83 ESYVTLAEKINALAPVSGQAKTAFFTTGAEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFP 162 (421)
T ss_pred HHHHHHHHHHHHhCCCCCCceEEEeCChHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCC
Confidence 8889999999999874 3579999999999999999999999999999999999999999999987642 2333222 2
Q ss_pred CCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhcc-CCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcC
Q 011777 214 GEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFG-TSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADE 292 (477)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~-~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DE 292 (477)
.++.++++|..+++ .+...+++.++++++.. .++++++||+||+|+++|+++++++|+++|+++|++||+++|+||
T Consensus 163 ~~~~~v~~p~~~~~---~~~~~~~~~l~~~~~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DE 239 (421)
T PRK09792 163 GSVYHVPYPSDLHG---ISTQDSLDAIERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADE 239 (421)
T ss_pred CCcEEcCCCccccc---ccHHHHHHHHHHHHHhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEec
Confidence 35667777665432 12234567788887631 346899999999999999989999999999999999999999999
Q ss_pred cccCccCCCCCCccccccCCCcceeeecccccCccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhh
Q 011777 293 VQTGFGRTGSHYWGFETQGVIPDIVTMAKGIGNGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKER 372 (477)
Q Consensus 293 v~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~ 372 (477)
||+||||+| .+|+++++++.||++||||++++|+|+|++++++++++.+....+.+||++||++|+|++++++++++++
T Consensus 240 v~tg~gr~G-~~~a~~~~~~~pDi~t~gK~l~~G~pigav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~ 318 (421)
T PRK09792 240 VQSGFARTG-KLFAMDHYADKPDLMTMAKSLAGGMPLSGVVGNANIMDAPAPGGLGGTYAGNPLAVAAAHAVLNIIDKES 318 (421)
T ss_pred cccCCCCCC-chhHHHhcCCCCcEEEeehhhcCCCceEEEEEcHHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHhhh
Confidence 999999999 7889999999999999999999999999999999999988777788999999999999999999998889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCCCCEEEE
Q 011777 373 RQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLHGNVFRI 452 (477)
Q Consensus 373 ~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi 452 (477)
+++++++++++++++|+++.++++.+.+++|.|+|+++++.++ ..+.+.......+.+.|+++||++.+.+..+++|||
T Consensus 319 ~~~~~~~~g~~l~~~l~~l~~~~p~v~~vrG~Gl~~~ie~~~~-~~~~~~~~~~~~l~~~~~~~Gv~i~~~g~~~~~irl 397 (421)
T PRK09792 319 LCERANQLGQRLKNTLIDAKESVPAIAAVRGLGSMIAAEFNDP-QTGEPSAAIAQKIQQRALAQGLLLLTCGAYGNVIRF 397 (421)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCcceecccceEEEEEecCC-ccCCcchHHHHHHHHHHHHCCcEEeecCCCCCEEEE
Confidence 9999999999999999999988998999999999999999643 222333345678899999999999765555799999
Q ss_pred eCCCCCcHHHHHHHHHHHHHHHh
Q 011777 453 KPPMCFTKDDADFLVDALDYSMS 475 (477)
Q Consensus 453 ~p~~~~t~e~i~~~l~~l~~~l~ 475 (477)
.||++++++||++++++|++++.
T Consensus 398 ~P~l~i~~~ei~~~~~~l~~~l~ 420 (421)
T PRK09792 398 LYPLTIPDAQFDAAMKILQDALS 420 (421)
T ss_pred eCCCcCCHHHHHHHHHHHHHHHh
Confidence 99999999999999999999885
No 42
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=100.00 E-value=2e-70 Score=558.73 Aligned_cols=393 Identities=28% Similarity=0.449 Sum_probs=338.2
Q ss_pred cCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhcccccc-ccCChHHHHHHHHHHhhCCCCC
Q 011777 77 QKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATT-IYLHHAIADFAEALASKMPGNL 155 (477)
Q Consensus 77 ~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~-~~~~~~~~~l~~~La~~~~~~~ 155 (477)
+.|+++++|+|+||||.|||+||||.+|++++++||+||+|++|+.+|++++.+... .+.++...+++++|++.+|.+.
T Consensus 27 ~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~l~~~~p~~~ 106 (442)
T PRK13360 27 KAPRLLVAAKGMYYTTHDGRRVLDGTAGLWCVNAGHGRPEIVEAVRAQAGELDYAPAFQMGHPKAFELANRIAEIAPGGL 106 (442)
T ss_pred CCCceEEeeeeeEEEeCCCCEEEECchhHHHhccCCCCHHHHHHHHHHHHhCCCcccCCcCCHHHHHHHHHHHHhCCCCC
Confidence 357899999999999999999999999999999999999999999999998765543 3568889999999999998778
Q ss_pred CEEEEeCChHHHHHHHHHHHHhcc------CCceEEEEccCccCCcccccccccCCCCCCCCC--CCCeeeecCCC-CcC
Q 011777 156 KVVYFVNSGTEANELAMLMARLST------GNLGMIALRNAYHGGSSGTIGLTALNTWKYPIP--QGEIHHVVNPD-PYH 226 (477)
Q Consensus 156 ~~v~~~~sGseA~~~Al~~ar~~~------~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~ 226 (477)
++|+|+||||||||.|+|+||.++ +|.+||+|+++|||++.+++++++...++..+. .+++.+++.+. .++
T Consensus 107 ~~v~f~~sGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~ 186 (442)
T PRK13360 107 NHVFFTNSGSESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLAR 186 (442)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhc
Confidence 899999999999999999999885 578999999999999999999987655443322 24566666663 355
Q ss_pred CCCCCCH----HHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCC
Q 011777 227 GSFGSDA----ARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGS 302 (477)
Q Consensus 227 ~~~~~~~----~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~ 302 (477)
+++..+. ..+.+++++++.....+++++||+||+++++|++.|+++||++|+++|++||+++|+|||||||||+|
T Consensus 187 ~~~~~~~~~~~~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG- 265 (442)
T PRK13360 187 NAFSKGQPEHGAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLG- 265 (442)
T ss_pred cccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCc-
Confidence 5554332 22467888888644457899999999999999999999999999999999999999999999999999
Q ss_pred CCccccccCCCcceeeecccccCc-cceEEEEeCHHHHHhhccc-------ccccCCCCcHHHHHHHHHHHHhhchhhHH
Q 011777 303 HYWGFETQGVIPDIVTMAKGIGNG-LPLGAVVTTPEIANVMAQK-------IQFNTFGGNPVCSAGGLAVLRVIDKERRQ 374 (477)
Q Consensus 303 ~~~~~~~~gv~pDivt~sK~lg~G-~pig~v~~~~~~~~~~~~~-------~~~~t~~~~~~~~aaa~a~l~~l~~~~~~ 374 (477)
++|+++++|+.||++||||+++|| +|+|++++++++++.+... .+++||++||++|++++++|++++++++.
T Consensus 266 ~~~a~~~~gv~PDivt~gK~l~gG~~P~gav~~~~~i~~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~L~~l~~~~l~ 345 (442)
T PRK13360 266 APFAAQYFGVTPDLLTCAKGLTNGAIPMGAVFVSSEIHDAFMQGPEAGIEFFHGYTYSGHPLACAAALATLDLYEREGLL 345 (442)
T ss_pred cchhhhhcCCCCceeeeeeccccCccceEEEEEcHHHHHHhhcCCccccccccCCCCCCCHHHHHHHHHHHHHHHhCCHH
Confidence 789999999999999999999998 8999999999999887532 36789999999999999999999988999
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCCCCEEEEeC
Q 011777 375 AHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLHGNVFRIKP 454 (477)
Q Consensus 375 ~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p 454 (477)
+++++++++++++|+++. +++.+.++||.|+++++++...... + ...+..+.+.|+++||++.+. ++.+||+|
T Consensus 346 ~~~~~~g~~l~~~l~~l~-~~~~v~~vrG~Gl~~~~~l~~~~~~--~-~~~~~~~~~~l~~~Gvl~~~~---~~~lr~~P 418 (442)
T PRK13360 346 TRAARLAPYWEDALHSLR-DAPHVIDIRNLGLVGAVELAPRDGK--P-GKRAYEVFLKCFEKGLMIRYT---GDILALSP 418 (442)
T ss_pred HHHHHHHHHHHHHHHHhh-cCCCeeeeeccceEEEEEEecCCCC--c-chhHHHHHHHHHHCCcEEEec---CCEEEEeC
Confidence 999999999999999885 4788899999999999999743211 1 123456788899999999764 47899999
Q ss_pred CCCCcHHHHHHHHHHHHHHHhhC
Q 011777 455 PMCFTKDDADFLVDALDYSMSKL 477 (477)
Q Consensus 455 ~~~~t~e~i~~~l~~l~~~l~~l 477 (477)
|+++|++|||+++++|+++++++
T Consensus 419 pl~~t~~eid~~~~~l~~~l~~~ 441 (442)
T PRK13360 419 PLIIEEAQIDELFDILAQALKET 441 (442)
T ss_pred CCccCHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999998763
No 43
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=100.00 E-value=6e-70 Score=552.65 Aligned_cols=411 Identities=26% Similarity=0.404 Sum_probs=335.8
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHhhhcCCCccccccCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHH
Q 011777 39 PPQLPPFDHDPKPYTGPSADQVFQKRKQFLGPSIFHYYQKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVL 118 (477)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~ 118 (477)
+|.+|.+.. ++++|++++++++..+++.... +..|+.+++|+|+||||.|||+||||++|++++++||+||+|+
T Consensus 7 ~~~~~~~~~---~~~~~~s~~l~~~~~~~~~~~~---~~~p~~~~~a~G~~l~D~dG~~ylD~~sg~~~~~lGh~~p~i~ 80 (464)
T TIGR00699 7 EPTGPLMKT---EIPGPKSKAAMKQLNEVFDARA---VHFLADYEKSRGNYLVDVDGNRLLDLYSQISSIPIGYNNPALL 80 (464)
T ss_pred CCCCCcccc---CCCCccHHHHHHHHHhhhcccC---cccceEEEecccCEEEeCCCCEEEEccCCHhhhcCCCCCHHHH
Confidence 455555544 5778999999999888863221 2558999999999999999999999999999999999999999
Q ss_pred HHHHHH--HhhccccccccCChHHHHHHHHHHh----hCCCCCCEEEEeCChHHHHHHHHHHHHhccC------------
Q 011777 119 NAIFEQ--SKLLQHATTIYLHHAIADFAEALAS----KMPGNLKVVYFVNSGTEANELAMLMARLSTG------------ 180 (477)
Q Consensus 119 ~Av~~~--l~~~~~~~~~~~~~~~~~l~~~La~----~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~------------ 180 (477)
+|+.+| ...+.+.. .+.++...+++++|++ .+|.++++|+|+|||+||||.|||+||.+++
T Consensus 81 ~Ai~~q~~~~~l~~~~-~~~~~~~~~la~~l~~~l~~~~p~~~~~v~f~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~ 159 (464)
T TIGR00699 81 KAAQSPEMATTLINRP-ALGNFPSKDWAKILKEGILKVAPKGQDQVWTGMSGSDANELAFKAAFMYYRSKQRGYQADFSE 159 (464)
T ss_pred HHHHHHHHHHhhcccc-cCCcHHHHHHHHHHHHhHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCccccccc
Confidence 999985 33443433 3567777888888754 6776778999999999999999999987632
Q ss_pred ---------------CceEEEEccCccCCcccccccccCCCCCC-CCCCCCeeeecCCCCcCCCCCC-------CHHHHH
Q 011777 181 ---------------NLGMIALRNAYHGGSSGTIGLTALNTWKY-PIPQGEIHHVVNPDPYHGSFGS-------DAARYA 237 (477)
Q Consensus 181 ---------------~~~ii~~~~~yhG~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~ 237 (477)
|.+||+|+++|||++.+++++++.+.++. ..+..++.+++.|+ +++++.. ....++
T Consensus 160 ~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~~~~~p~p~-~~~~~~~~~~~~~~~~~~~l 238 (464)
T TIGR00699 160 EENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFDWPQAPFPS-LKYPLEEHVKENAKEEQRCL 238 (464)
T ss_pred ccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCceecCCCC-cccccccccccchhHHHHHH
Confidence 23799999999999999999987643332 22224556666665 3333211 123457
Q ss_pred HHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCC--cc
Q 011777 238 QDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVI--PD 315 (477)
Q Consensus 238 ~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~--pD 315 (477)
++++++++. +.+++|+||+||+++++|+++++++||++|+++|++||++||+||||+||||+| .+|+++++|+. ||
T Consensus 239 ~~l~~~l~~-~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGrtG-~~fa~e~~gv~~~PD 316 (464)
T TIGR00699 239 EEVEDLIKK-WHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQTGVGATG-KFWAHEHWNLDDPPD 316 (464)
T ss_pred HHHHHHHHh-cCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeeeeCCCCCc-chhHHHhcCCCCCCC
Confidence 778888863 346799999999999999999999999999999999999999999999999999 79999999997 99
Q ss_pred eeeeccccc-CccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHh
Q 011777 316 IVTMAKGIG-NGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQER 394 (477)
Q Consensus 316 ivt~sK~lg-~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~ 394 (477)
++|+||+++ ||+. +.++ .........+++||++||++|++++++|++++++++.+++++++++|+++|+++.++
T Consensus 317 i~t~gK~lg~gG~~----~~~~-~~~~~~~~~~~~T~~gnp~~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~ 391 (464)
T TIGR00699 317 MVTFSKKFQTAGYF----FHDP-AFRPNKPYRQFNTWMGDPSRALILREIIQEIKRKDLLENVAHVGDYLYTGLEDLQKK 391 (464)
T ss_pred EEEehhhhccCCcc----ccch-hccCCCCcccccCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999996 5643 3332 222122345889999999999999999999999999999999999999999999888
Q ss_pred CC-Cceeee--ccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHH
Q 011777 395 HD-IIGDVR--GRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADFLVDALD 471 (477)
Q Consensus 395 ~~-~~~~v~--g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~ 471 (477)
++ .+.++| |.|+|+++++. +......+.+.++++||++.+.+ .++|||.||+++|++|||+++++|+
T Consensus 392 ~~~~i~~vRg~G~Glm~gie~~--------~~~~~~~i~~~~~~~Gvl~~~~g--~~~ir~~Ppl~it~~eid~~~~~l~ 461 (464)
T TIGR00699 392 YPEFIQNLRGKGRGTFIAWDTP--------DEAKRDKLLKKARNNGVNIGGCG--VKAIRLRPMLVFQKHHADIFLEIIS 461 (464)
T ss_pred CCCceeeecccCeEEEEEEecC--------CHHHHHHHHHHHHHCCcEEecCC--CCeEEEeCCCCCCHHHHHHHHHHHH
Confidence 98 789999 99999999982 22335678999999999998753 4899999999999999999999999
Q ss_pred HHH
Q 011777 472 YSM 474 (477)
Q Consensus 472 ~~l 474 (477)
+++
T Consensus 462 ~~~ 464 (464)
T TIGR00699 462 KII 464 (464)
T ss_pred HhC
Confidence 874
No 44
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=3.8e-70 Score=553.54 Aligned_cols=381 Identities=23% Similarity=0.323 Sum_probs=327.7
Q ss_pred CceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhcccccc-ccCChHHHHHHHHHHhhCCCCCC
Q 011777 78 KPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATT-IYLHHAIADFAEALASKMPGNLK 156 (477)
Q Consensus 78 ~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~-~~~~~~~~~l~~~La~~~~~~~~ 156 (477)
.|+++++|+|+||||.|||+||||.+|++++++||+||+|++|+.+|++++.+... .+.++...+|+++|++..|.+++
T Consensus 22 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~ 101 (422)
T PRK05630 22 RNRLVTSTDGVFLTLEDGSTVIDAMSSWWSAAHGHGHPRLKAAAHKQIDTMSHVMFGGLTHEPAIKLTRKLLNLTDNGLD 101 (422)
T ss_pred CCeeEEeceeeEEEECCCCEEEEcchhHHHhcCCCCCHHHHHHHHHHHHhCCCcccCCcCCHHHHHHHHHHHhhCCCCcC
Confidence 57999999999999999999999999999999999999999999999998766543 35678899999999999987788
Q ss_pred EEEEeCChHHHHHHHHHHHHhcc------CCceEEEEccCccCCcccccccccCC-CCCCCCCC--CCeeeecCCCCcCC
Q 011777 157 VVYFVNSGTEANELAMLMARLST------GNLGMIALRNAYHGGSSGTIGLTALN-TWKYPIPQ--GEIHHVVNPDPYHG 227 (477)
Q Consensus 157 ~v~~~~sGseA~~~Al~~ar~~~------~~~~ii~~~~~yhG~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~ 227 (477)
+|+|++|||||+|.|+|+||.++ +|.+||+++++|||.+.+++++++.. .++..+.+ .++.+++.|.....
T Consensus 102 ~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 181 (422)
T PRK05630 102 HVFYSDSGSVSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPVRGS 181 (422)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcccCC
Confidence 99999999999999999999985 57889999999999999999987632 22222111 34555555532211
Q ss_pred CCCCCHHHHHHHHHHHHhccCCCCeeEEEeccc-CCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCcc
Q 011777 228 SFGSDAARYAQDLQDHIDFGTSGKVAGFIAETI-QGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWG 306 (477)
Q Consensus 228 ~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi-~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~ 306 (477)
.+ ++...+.+.+++++. +++++||+||+ |+++|+++|+++|+++|+++|++||+++|+||||+||||+| .+|+
T Consensus 182 ~~-~~~~~~~~~~~~~~~----~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG-~~~a 255 (422)
T PRK05630 182 SP-QEISEYLRSLELLID----ETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTG-ELFA 255 (422)
T ss_pred Ch-HHHHHHHHHHHHHHh----hceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCc-hhhH
Confidence 11 223445667777765 58999999996 99999999999999999999999999999999999999999 7999
Q ss_pred ccccCCCcceeeecccccCc-cceEEEEeCHHHHHhhccc------ccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHH
Q 011777 307 FETQGVIPDIVTMAKGIGNG-LPLGAVVTTPEIANVMAQK------IQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCAD 379 (477)
Q Consensus 307 ~~~~gv~pDivt~sK~lg~G-~pig~v~~~~~~~~~~~~~------~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~ 379 (477)
++++++.||++||||+++|| +|+|++++++++++.+... .|++||++||++|++++++|++++++++.+++++
T Consensus 256 ~~~~gv~PDi~t~gK~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~~l~~~~~~~~~~~ 335 (422)
T PRK05630 256 TLAAGVTPDIMCVGKALTGGFMSFAATLCTDKVAQLISTPNGGGALMHGPTFMANPLACAVAHASLEIIETGMWRKQVKR 335 (422)
T ss_pred HHhcCCCCCeeeeechhhcCccccceeeccHHHHHHHhccCCCCccccCCCCcCCHHHHHHHHHHHHHHHhCcHHHHHHH
Confidence 99999999999999999999 5999999999999987531 5789999999999999999999998899999999
Q ss_pred HHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCCCCEEEEeCCCCCc
Q 011777 380 VGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLHGNVFRIKPPMCFT 459 (477)
Q Consensus 380 ~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t 459 (477)
++++|+++|+++. +++.+.++||.|+|+++++..+. ....+.+.++++||++.+. ++++||.||+++|
T Consensus 336 ~g~~l~~~L~~l~-~~~~v~~vRg~Gl~~~ie~~~~~--------~~~~~~~~~~~~Gl~~~~~---g~~l~~~PpL~it 403 (422)
T PRK05630 336 IEAELIAGLSPLA-HLPGVADVRVLGAIGVVEMEQPV--------DMEEATQAAVDHGVWLRPF---GRLVYVMPPYITT 403 (422)
T ss_pred HHHHHHHHHHHhh-cCCCeeeeeccccEEEEEECCcc--------cHHHHHHHHHHCCeEEEec---CCEEEEECCccCC
Confidence 9999999999875 47888999999999999995321 1346788999999999864 4799999999999
Q ss_pred HHHHHHHHHHHHHHHhh
Q 011777 460 KDDADFLVDALDYSMSK 476 (477)
Q Consensus 460 ~e~i~~~l~~l~~~l~~ 476 (477)
++|||+++++|+++++.
T Consensus 404 ~~~i~~~~~~l~~al~~ 420 (422)
T PRK05630 404 SEQIAQICAALAAAVKA 420 (422)
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99999999999999863
No 45
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=100.00 E-value=7.8e-70 Score=554.91 Aligned_cols=393 Identities=31% Similarity=0.468 Sum_probs=337.7
Q ss_pred cCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhcccccc-ccCChHHHHHHHHHHhhCCCCC
Q 011777 77 QKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATT-IYLHHAIADFAEALASKMPGNL 155 (477)
Q Consensus 77 ~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~-~~~~~~~~~l~~~La~~~~~~~ 155 (477)
+.|+++++|+|+||||.|||+||||.+|++++++||+||+|++|+++|++++.+... .+.++...+|+++|++.+|.+.
T Consensus 30 ~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~L~~~~p~~~ 109 (445)
T PRK09221 30 AAPRLLVSAEGMYYTDADGRKILDGTAGLWCCNAGHGRPEIVEAVARQAATLDYAPAFQMGHPLAFELAERLAELAPGGL 109 (445)
T ss_pred CCCceEEeccccEEEeCCCCEEEEccccHhhccCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCC
Confidence 357899999999999999999999999999999999999999999999998766544 3568889999999999998778
Q ss_pred CEEEEeCChHHHHHHHHHHHHhcc------CCceEEEEccCccCCcccccccccCCCCCCCCC--CCCeeeecCCC-CcC
Q 011777 156 KVVYFVNSGTEANELAMLMARLST------GNLGMIALRNAYHGGSSGTIGLTALNTWKYPIP--QGEIHHVVNPD-PYH 226 (477)
Q Consensus 156 ~~v~~~~sGseA~~~Al~~ar~~~------~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~ 226 (477)
++|+|++|||||+|.|+|+||.++ +|.+||+++++|||.+.+++++++...++..+. ..++.+++.++ .++
T Consensus 110 ~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (445)
T PRK09221 110 DHVFFTNSGSESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPE 189 (445)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccc
Confidence 899999999999999999999885 477899999999999999999887654433222 24566666665 555
Q ss_pred CCCCCCH----HHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCC
Q 011777 227 GSFGSDA----ARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGS 302 (477)
Q Consensus 227 ~~~~~~~----~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~ 302 (477)
+++.... ..+.++++++++....+++++||+||+++++|++.|+++||++|+++|++||+++|+||||+||||+|
T Consensus 190 ~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG- 268 (445)
T PRK09221 190 NAFSKGQPEHGAELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLG- 268 (445)
T ss_pred cccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCc-
Confidence 5454322 22456788888754447899999999999999999999999999999999999999999999999999
Q ss_pred CCccccccCCCcceeeecccccCc-cceEEEEeCHHHHHhhcc-------cccccCCCCcHHHHHHHHHHHHhhchhhHH
Q 011777 303 HYWGFETQGVIPDIVTMAKGIGNG-LPLGAVVTTPEIANVMAQ-------KIQFNTFGGNPVCSAGGLAVLRVIDKERRQ 374 (477)
Q Consensus 303 ~~~~~~~~gv~pDivt~sK~lg~G-~pig~v~~~~~~~~~~~~-------~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~ 374 (477)
.+|+++++++.||++|+||+++|| +|+|++++++++++.+.. ..+++||++||+++++++++|++++++++.
T Consensus 269 ~~~~~~~~gv~PDi~~~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~L~~i~~~~l~ 348 (445)
T PRK09221 269 AAFAAERFGVTPDIITFAKGLTNGAIPMGAVIASDEIYDAFMQGPEYAIEFFHGYTYSAHPVACAAGLATLDIYREEDLF 348 (445)
T ss_pred hhhHHHhcCCCCCEEEeccccccCcccceeeEEcHHHHHhhccCcccccccccccCCCcCHHHHHHHHHHHHHHHhccHH
Confidence 799999999999999999999998 799999999999988753 246789999999999999999999888999
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCCCCEEEEeC
Q 011777 375 AHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLHGNVFRIKP 454 (477)
Q Consensus 375 ~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p 454 (477)
+++++++++++++|+++. +++.+.++||.|++.++++..... .+ ......+.+.|+++||++.++ ++.+||+|
T Consensus 349 ~~~~~~g~~l~~~l~~l~-~~~~v~~vrg~Gl~~~v~~~~~~~--~~-~~~~~~~~~~~~~~Gv~~~~~---~~~lr~~P 421 (445)
T PRK09221 349 ERAAELAPYFEDAVHSLK-GLPHVIDIRNIGLVAGIELAPRPG--AP-GARGYEAFMKCFEKGLLVRYT---GDTIALSP 421 (445)
T ss_pred HHHHHHHHHHHHHHHhhc-cCCCEEEEecCceEEEEEEecccc--cc-cchHHHHHHHHHHCCeEEeec---CCEEEEEC
Confidence 999999999999999884 578889999999999999975321 11 123456888999999999764 47899999
Q ss_pred CCCCcHHHHHHHHHHHHHHHhhC
Q 011777 455 PMCFTKDDADFLVDALDYSMSKL 477 (477)
Q Consensus 455 ~~~~t~e~i~~~l~~l~~~l~~l 477 (477)
|+++|++||++++++|++++.++
T Consensus 422 pl~~t~~eid~~~~~l~~~l~~~ 444 (445)
T PRK09221 422 PLIIEKAQIDELVDALGDALRAV 444 (445)
T ss_pred CccCCHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999998753
No 46
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1e-69 Score=551.00 Aligned_cols=402 Identities=24% Similarity=0.363 Sum_probs=336.5
Q ss_pred HHHHHHHhhhcCCCcccc-ccCc-eeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhcccccc-c
Q 011777 58 DQVFQKRKQFLGPSIFHY-YQKP-LNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATT-I 134 (477)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~-~~~p-~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~-~ 134 (477)
.+++++..++++...... ...| +++++|+|+||||.|||+||||.+|++++++||+||+|++|+++|++++.+... .
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~ 83 (429)
T PRK06173 4 QELLELDRQHIWHPYSSVTDPIPVYPVERADGVMITLKDGRRLIDGMSSWWAALHGYNHPRLNAAATNQLAKMSHIMFGG 83 (429)
T ss_pred HHHhhhhhcccccccccccccCCCceEEeceeeEEEcCCCCEEEEccchHHhccCCCCCHHHHHHHHHHHHhcCCccccc
Confidence 345555555654332211 1234 468999999999999999999999999999999999999999999999776543 3
Q ss_pred cCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhc------cCCceEEEEccCccCCcccccccccC-CCC
Q 011777 135 YLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLS------TGNLGMIALRNAYHGGSSGTIGLTAL-NTW 207 (477)
Q Consensus 135 ~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~------~~~~~ii~~~~~yhG~~~~~~~~~~~-~~~ 207 (477)
+.++...+|+++|++.+|.++++|+|++|||||||+|+|+||.+ ++|.+||+++++|||.+.+++++++. ..+
T Consensus 84 ~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~ 163 (429)
T PRK06173 84 FTHEPAVELAQKLLEILPPSLNKIFFADSGSVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGM 163 (429)
T ss_pred cCCHHHHHHHHHHHhhCCCCcCEEEEeCCchHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhh
Confidence 56888999999999999877899999999999999999999988 46889999999999999999888653 223
Q ss_pred CCCCC--CCCeeeecCCCCcCCCCCCC-HHHHHHHHHHHHhccCCCCeeEEEeccc-CCCCCeeeCCchhHHHHHHHHHH
Q 011777 208 KYPIP--QGEIHHVVNPDPYHGSFGSD-AARYAQDLQDHIDFGTSGKVAGFIAETI-QGVGGAVELAPGYLKLVYDIVRK 283 (477)
Q Consensus 208 ~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~le~~i~~~~~~~~a~vi~epi-~~~~G~~~~~~~~l~~l~~l~~~ 283 (477)
+..+. .+++.+++.|+.+ ++.+ ...+++.++++++. +++++|+||+||+ ||++|+++|+++|+++|+++|++
T Consensus 164 ~~~~~~~~~~~~~~~~p~~~---~~~~~~~~~l~~l~~~i~~-~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~ 239 (429)
T PRK06173 164 HGLFNHSLPVQYFLPQPSIK---FGEEWNDEAIEPLQDLLEQ-KGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQ 239 (429)
T ss_pred hhcccccCCCCeEeCCCCcc---cchhHHHHHHHHHHHHHHh-CCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHH
Confidence 32222 1345556555432 1111 12346677888863 3468999999997 99999999999999999999999
Q ss_pred hCcEEEEcCcccCccCCCCCCccccccCCCcceeeecccccCc-cceEEEEeCHHHHHhhcc-----cccccCCCCcHHH
Q 011777 284 AGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIGNG-LPLGAVVTTPEIANVMAQ-----KIQFNTFGGNPVC 357 (477)
Q Consensus 284 ~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg~G-~pig~v~~~~~~~~~~~~-----~~~~~t~~~~~~~ 357 (477)
||+++|+||||+||||+| .+|+++++|+.||++||||+++|| +|++++++++++++.+.. ..+++||++||++
T Consensus 240 ~g~llI~DEv~tG~GrtG-~~~a~~~~gv~PDiv~~gK~l~gG~~p~~a~~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~ 318 (429)
T PRK06173 240 YGVLLIFDEIATGFGRTG-KLFALEHAGVVPDIMCIGKALTGGYLTLSATITTEAIAQTICSGEAKCFMHGPTFMANPLA 318 (429)
T ss_pred cCCeEEecchhcCCCcCC-cchHHHhcCCCCCEEEeehhhhCCccccceEEecHHHHHHHhcCCCCccccCCCCCcCHHH
Confidence 999999999999999999 788999999999999999999999 599999999999998753 2477899999999
Q ss_pred HHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcC
Q 011777 358 SAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELG 437 (477)
Q Consensus 358 ~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~G 437 (477)
|++++++|++++++++.+++++++++|+++|+++ .+++.+.++|+.|+|+++++..+. ....+.+.|+++|
T Consensus 319 ~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~L~~~-~~~~~v~~vRg~Gl~~~iel~~~~--------~~~~i~~~l~e~G 389 (429)
T PRK06173 319 CAIAAESIRLLLESPWQQNIQRIEAQLKQELAPA-AEFDSVAEVRVLGAIGVVEMKEPV--------NMATLQPRFVEHG 389 (429)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHh-hcCCCeeeeeccceEEEEEeCCcc--------cHHHHHHHHHHCC
Confidence 9999999999998889999999999999999986 457888899999999999995321 2357888999999
Q ss_pred ceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 438 VLVGKGGLHGNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 438 v~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
|++.+. ++++||.||+++|++||++++++|++++.+
T Consensus 390 i~v~~~---g~~l~~~Ppl~it~~ei~~~~~~l~~~l~~ 425 (429)
T PRK06173 390 IWVRPF---GKLVYIMPPFIISPDELSQLTSGLLRVLKQ 425 (429)
T ss_pred eEEEec---CCEEEEeCCccCCHHHHHHHHHHHHHHHHH
Confidence 999875 479999999999999999999999999864
No 47
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=100.00 E-value=1.8e-69 Score=548.43 Aligned_cols=381 Identities=26% Similarity=0.379 Sum_probs=328.6
Q ss_pred ceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhcccccc-ccCChHHHHHHHHHHhhCCCCCCE
Q 011777 79 PLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATT-IYLHHAIADFAEALASKMPGNLKV 157 (477)
Q Consensus 79 p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~-~~~~~~~~~l~~~La~~~~~~~~~ 157 (477)
|+.+++|+|+|+||.|||+||||.+|++++++||+||+|++|+++|++++.+... .+.++...+|+++|++.+|.+.++
T Consensus 26 ~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~ 105 (428)
T PRK07986 26 VYPVVSAEGCELILADGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGITHPPAIELCRKLVAMTPQPLEC 105 (428)
T ss_pred CeeEEeeeeeEEEeCCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHhhcCCccccccCCHHHHHHHHHHHhhCCCCcCE
Confidence 4789999999999999999999999999999999999999999999998765443 346888999999999999877889
Q ss_pred EEEeCChHHHHHHHHHHHHhc-----cCCceEEEEccCccCCcccccccccCC-CCCCCCC--CCCeeeecCCCCcCCCC
Q 011777 158 VYFVNSGTEANELAMLMARLS-----TGNLGMIALRNAYHGGSSGTIGLTALN-TWKYPIP--QGEIHHVVNPDPYHGSF 229 (477)
Q Consensus 158 v~~~~sGseA~~~Al~~ar~~-----~~~~~ii~~~~~yhG~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~ 229 (477)
++|+||||||+|.|+|+||.+ ++|.+||+++++|||.+.+++++++.. .++..+. .+++.+++.|+.+.
T Consensus 106 v~f~~SGsEAve~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~--- 182 (428)
T PRK07986 106 VFLADSGSVAVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRF--- 182 (428)
T ss_pred EEEeCCcHHHHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCccc---
Confidence 999999999999999999988 678999999999999999999887632 2222221 13555565554321
Q ss_pred CCC-HHHHHHHHHHHHhccCCCCeeEEEeccc-CCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccc
Q 011777 230 GSD-AARYAQDLQDHIDFGTSGKVAGFIAETI-QGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGF 307 (477)
Q Consensus 230 ~~~-~~~~~~~le~~i~~~~~~~~a~vi~epi-~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~ 307 (477)
..+ ....+++++++++. .++++++||+||+ ++.+|+++++++||++|+++|++||+++|+||||+||||+| ++|++
T Consensus 183 ~~~~~~~d~~~l~~~l~~-~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG-~~fa~ 260 (428)
T PRK07986 183 DGEWDERDIAPFARLMAA-HRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTG-KLFAC 260 (428)
T ss_pred chhhHHHHHHHHHHHHHh-CCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCC-Ceeee
Confidence 110 11235677777763 3468999999996 99999999999999999999999999999999999999999 79999
Q ss_pred cccCCCcceeeecccccCc-cceEEEEeCHHHHHhhccc-----ccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHH
Q 011777 308 ETQGVIPDIVTMAKGIGNG-LPLGAVVTTPEIANVMAQK-----IQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVG 381 (477)
Q Consensus 308 ~~~gv~pDivt~sK~lg~G-~pig~v~~~~~~~~~~~~~-----~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~ 381 (477)
+++|+.||++|+||+++|| +|+|++++++++++.+... .+++||++||++|++++++|++++++++++++++++
T Consensus 261 ~~~gv~PDi~t~gK~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~~i~~~~~~~~~~~~g 340 (428)
T PRK07986 261 EHAGIAPDILCLGKALTGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAVANASLSLLESGDWQQQVAAIE 340 (428)
T ss_pred cccCCCCCEEEechhhhCCcccCcchhchHHHHHHhhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 9999999999999999999 6999999999999988653 378899999999999999999999889999999999
Q ss_pred HHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCCCCEEEEeCCCCCcHH
Q 011777 382 SHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLHGNVFRIKPPMCFTKD 461 (477)
Q Consensus 382 ~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e 461 (477)
++++++|+++. +++.+.++||.|+|+++++..+. ....+.+.|+++||++.+. ++++||.||+++|++
T Consensus 341 ~~l~~~l~~l~-~~~~i~~vRg~Gl~~~ve~~~~~--------~~~~~~~~l~~~Gl~~~~~---g~~i~~~Ppl~it~~ 408 (428)
T PRK07986 341 AQLREELAPLR-DAPMVADVRVLGAIGVVETTRPV--------NMAALQRFFVEQGVWIRPF---GKLIYLMPPYIILPE 408 (428)
T ss_pred HHHHHHHHHHh-cCCCEEeEeccceEEEEEeCCcc--------cHHHHHHHHHHCCcEEEec---CCEEEEeCCCCCCHH
Confidence 99999999986 48888999999999999985321 1456888999999999875 479999999999999
Q ss_pred HHHHHHHHHHHHHhh
Q 011777 462 DADFLVDALDYSMSK 476 (477)
Q Consensus 462 ~i~~~l~~l~~~l~~ 476 (477)
||++++++|++++.+
T Consensus 409 ei~~~~~~l~~~l~~ 423 (428)
T PRK07986 409 QLQRLTAAVNRAVQD 423 (428)
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999999863
No 48
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=100.00 E-value=6.1e-69 Score=521.22 Aligned_cols=409 Identities=29% Similarity=0.389 Sum_probs=339.0
Q ss_pred CCCHHHHHHHHhhhcCCCcc---c-ccc---CceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHh
Q 011777 54 GPSADQVFQKRKQFLGPSIF---H-YYQ---KPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSK 126 (477)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~---~-~~~---~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~ 126 (477)
.++|++++++.+++++-++. . +.. .|+.+.+|+|+||||+|||+||||+++++.+.|||+||.|++|+.+|++
T Consensus 4 ~~~S~~l~~~A~~~~pGGvnspvra~~~v~~~P~fi~~g~Ga~l~DvDGn~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~ 83 (432)
T COG0001 4 FPKSEALFERAKKVIPGGVNSPVRAFKSVGGYPIFIERGKGAYLTDVDGNEYIDYVLGWGPLILGHAHPAVVEAVQEQLE 83 (432)
T ss_pred ccchHHHHHHHhhhCCCCCCccccccCCCCCCCeeEEeccCCeEEeCCCCEeeehhccCcccccCCCCHHHHHHHHHHHH
Confidence 46889999999999974332 1 222 7999999999999999999999999999999999999999999999999
Q ss_pred hccccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCC
Q 011777 127 LLQHATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNT 206 (477)
Q Consensus 127 ~~~~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~ 206 (477)
++... .-+++...++++.|.+++|. .++|.|+||||||++.|||+||.+|||++||.|+|+|||+.+..+.-.+...
T Consensus 84 ~G~~f--g~Pte~Ei~~Aell~~~~p~-~e~vrfvnSGTEAtmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~ 160 (432)
T COG0001 84 RGLSF--GAPTELEVELAELLIERVPS-IEKVRFVNSGTEATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGA 160 (432)
T ss_pred hcCCC--CCCCHHHHHHHHHHHHhcCc-ccEEEEecchhHHHHHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCc
Confidence 86432 23678889999999999986 5899999999999999999999999999999999999999998877644222
Q ss_pred CCCCCCC-CCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhC
Q 011777 207 WKYPIPQ-GEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAG 285 (477)
Q Consensus 207 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~g 285 (477)
-....+. .|+......+..-.+||+ ++.++++++.. ++++|+||+||++++.|+++|.++||++|+++|++||
T Consensus 161 ~t~g~p~s~Gvp~~~a~~ti~~~yND-----~~al~~~~~~~-g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G 234 (432)
T COG0001 161 ATLGSPSSPGVPADVAKHTLVLPYND-----LEALEEAFEEY-GDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHG 234 (432)
T ss_pred ccCCCCCCCCCChhhhccEEEecCCC-----HHHHHHHHHHc-CCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcC
Confidence 2111121 343333333333445664 68888888743 4799999999999999999999999999999999999
Q ss_pred cEEEEcCcccCccCCCCCCccccccCCCcceeeecccccCccceEEEEeCHHHHHhhccc---ccccCCCCcHHHHHHHH
Q 011777 286 GVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIGNGLPLGAVVTTPEIANVMAQK---IQFNTFGGNPVCSAGGL 362 (477)
Q Consensus 286 illI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pig~v~~~~~~~~~~~~~---~~~~t~~~~~~~~aaa~ 362 (477)
++||+|||.|||.- . .-.+.+++|++||+.||+|.+|||+|+|++.+++++|+.+... .+.+|+++||++++|+.
T Consensus 235 ~lLI~DEViTGFR~-~-~gGaq~~~gi~PDlttlGKiIGGGlP~ga~gGr~eiM~~~~p~g~vyqaGT~sgnplamaAG~ 312 (432)
T COG0001 235 ALLIFDEVITGFRV-A-LGGAQGYYGVEPDLTTLGKIIGGGLPIGAFGGRAEIMEQLAPLGPVYQAGTLSGNPLAMAAGL 312 (432)
T ss_pred cEEEEecchhhccc-C-CcccccccCcCcchhhhhhhhcCCcceeeeccHHHHHhhhCCCCCccccCCCCCcHHHHHHHH
Confidence 99999999999943 2 1224578999999999999999999999999999999987653 57899999999999999
Q ss_pred HHHHhhch-hhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCC-----CCccHHHHHHHHHHHHHc
Q 011777 363 AVLRVIDK-ERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKE-----KTPAKAETAVLFEKLREL 436 (477)
Q Consensus 363 a~l~~l~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~-----~~~~~~~~~~~~~~l~~~ 436 (477)
++|+.+.+ +..++++.+.+++|+++|+++..++++...+.+.|.|+.+.|...... +..+......+.+.|+++
T Consensus 313 atl~~l~~~~~~y~~l~~~~~~L~~gl~~~~~~~g~~~~v~~~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l~~ 392 (432)
T COG0001 313 ATLEELMTEEGVYERLDALGERLAEGLRAAAERHGIPLTVNRVGSMFGIFFTEEGVRNYADAKRSDVERFAKFFHHLLNR 392 (432)
T ss_pred HHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeecceEEEEecCCCCCCHHHHHhhchHHHHHHHHHHHhC
Confidence 99999987 458999999999999999999999999999999999999999764311 112333455677799999
Q ss_pred CceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHHHhhC
Q 011777 437 GVLVGKGGLHGNVFRIKPPMCFTKDDADFLVDALDYSMSKL 477 (477)
Q Consensus 437 Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~l 477 (477)
||++.|.. ++..+ + +..||++|||+.+++++++++++
T Consensus 393 GV~l~ps~-~ea~f-l--S~ahte~di~~~~~a~~~~~~~~ 429 (432)
T COG0001 393 GVYLAPSQ-FEAGF-L--STAHTEEDIDRTLEAADEAFKEL 429 (432)
T ss_pred CcccCCcc-cccee-e--ecccCHHHHHHHHHHHHHHHHHh
Confidence 99999864 22222 3 68899999999999999998753
No 49
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=100.00 E-value=5.2e-70 Score=493.33 Aligned_cols=412 Identities=44% Similarity=0.762 Sum_probs=370.7
Q ss_pred HHHHHHHHhhhcCCCccccc-cCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhcccccccc
Q 011777 57 ADQVFQKRKQFLGPSIFHYY-QKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIY 135 (477)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~-~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~ 135 (477)
.++.+.++++++.+....+| ..|+.|+|++|+|++|++|++|||+.++.. -.|||||+|++|...|+.... ++.++
T Consensus 7 K~etlklRk~hIG~~Cq~Fy~sDP~kivRaq~QYmfDE~g~~yLDCInNVa--Hvghchp~VV~A~~kQmat~~-tN~RF 83 (452)
T KOG1403|consen 7 KTETLKLRKQHIGQACQLFYRSDPLKIVRAQGQYMFDEEGTRYLDCINNVA--HVGHCHPEVVRAGAKQMATIS-TNNRF 83 (452)
T ss_pred hHHHHhHHHhccCcceeEEecCCchhhehhccceeeccCcccHHHHhhhhh--hcccCCHHHHHHHHHHHhHhc-ccchh
Confidence 35788999999988765544 579999999999999999999999998775 579999999999999998653 45578
Q ss_pred CChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCC---
Q 011777 136 LHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIP--- 212 (477)
Q Consensus 136 ~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~--- 212 (477)
.+....+.++.|...+|. ++.++|+|||||||++|+++||.+++..++|..+.+|||+....+-++ .|++..+
T Consensus 84 lhd~lv~cA~~l~stlPe-Lsvc~F~NSGSEANDLALRLAR~ftkhqDvItldHAYHGHl~s~mE~S---PYKF~~g~~v 159 (452)
T KOG1403|consen 84 LHDELVQCARTLTSTLPE-LSVCFFVNSGSEANDLALRLARNFTKHQDVITLDHAYHGHLQSVMEVS---PYKFNQGGGV 159 (452)
T ss_pred hHHHHHHHHHHHhhcCCC-ceEEEEecCCchhhHHHHHHHHhhcccCceEEEechhccceeeeeecc---ceeccCCCCc
Confidence 888999999999999997 899999999999999999999999999999999999999987776664 4555433
Q ss_pred -CCC-eeeecCCCCcCCCCCCC-------HHHHHHHHHHHHhc--cCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHH
Q 011777 213 -QGE-IHHVVNPDPYHGSFGSD-------AARYAQDLQDHIDF--GTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIV 281 (477)
Q Consensus 213 -~~~-~~~~~~~~~~~~~~~~~-------~~~~~~~le~~i~~--~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~ 281 (477)
.++ ++..|.|+.||+.+.++ +..|.++++++++. .....+|++|.|..|+.||.+.||.+|++.+.+..
T Consensus 160 ~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~V 239 (452)
T KOG1403|consen 160 AKPDYVHVAPCPDVYRGKFRDKMYPDADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAV 239 (452)
T ss_pred CCCceeEecCCccccccccccccCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHH
Confidence 244 45567899999887542 23578889888873 24567999999999999999999999999999999
Q ss_pred HHhCcEEEEcCcccCccCCCCCCccccccCCCcceeeecccccCccceEEEEeCHHHHHhhcc--cccccCCCCcHHHHH
Q 011777 282 RKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIGNGLPLGAVVTTPEIANVMAQ--KIQFNTFGGNPVCSA 359 (477)
Q Consensus 282 ~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pig~v~~~~~~~~~~~~--~~~~~t~~~~~~~~a 359 (477)
+.+|.++|.||||.||||.|+++|+++.++..|||+|++|.+|+|.|+++|++++++.+.+.. ..+++||+|||++||
T Consensus 240 r~aGGv~IaDEVQvGFGRvG~hyWafq~y~fiPDIVtmgKpmGNGhPVa~VattkeIA~Af~atgv~YFNTyGGnPVsCA 319 (452)
T KOG1403|consen 240 RSAGGVCIADEVQVGFGRVGSHYWAFQTYNFIPDIVTMGKPMGNGHPVAAVATTKEIAQAFHATGVEYFNTYGGNPVSCA 319 (452)
T ss_pred hcCCCeEEeehhhhcccccchhhhhhhhhccccchheecccCCCCCeeeEEeccHHHHHHhccccceehhccCCCchhHH
Confidence 999999999999999999999999999999999999999999999999999999999999875 368899999999999
Q ss_pred HHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHc-Cc
Q 011777 360 GGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLREL-GV 438 (477)
Q Consensus 360 aa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv 438 (477)
+++++++++++|+++++..+.+++|...|+++..+|+.++++||.|+|+++++++|...+.|+...+..+..+|++. +|
T Consensus 320 v~laVm~v~e~E~Lq~ha~~vG~~L~~lL~~~k~kh~~IGDvRGvGLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~V 399 (452)
T KOG1403|consen 320 VGLAVMRVCEDENLQEHAQQVGEKLEVLLRRLKQKHECIGDVRGVGLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYRV 399 (452)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhccceeccccceEEEeeeeecccccCCCcHHHHHHHHHHHHHhhhE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999875 79
Q ss_pred eeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHHHh
Q 011777 439 LVGKGGLHGNVFRIKPPMCFTKDDADFLVDALDYSMS 475 (477)
Q Consensus 439 ~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~ 475 (477)
++...|+..|.+.|.||++.+++++++++..|++++.
T Consensus 400 LlsaDGPh~NilKiKPPmCFneena~e~v~~ld~iLT 436 (452)
T KOG1403|consen 400 LLSADGPHRNILKIKPPMCFNEENADEFVLGLDEILT 436 (452)
T ss_pred EEecCCCCCceeecCCCcccChhhHHHHHHHHHHHHH
Confidence 9998888899999999999999999999999998875
No 50
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=3.2e-68 Score=542.38 Aligned_cols=408 Identities=26% Similarity=0.371 Sum_probs=339.6
Q ss_pred CCCHHHHHHHHhhhcCCCcc---ccc-----cCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHH
Q 011777 54 GPSADQVFQKRKQFLGPSIF---HYY-----QKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQS 125 (477)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~---~~~-----~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l 125 (477)
.|+|.+++++.+++++-... .++ +.|+++++|+|+||||.|||+||||.+|++++++||+||+|++|+.+|+
T Consensus 3 ~~~s~~~~~~a~~~~p~g~~~~~~~~~~~~~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~ 82 (428)
T PRK12389 3 FTKSEALHQEALEHIVGGVNSPSRSYKAVGGGAPVVMERGKGAYFYDVDGNKYIDYLAAYGPIITGHAHPHITKAITEAA 82 (428)
T ss_pred ChhhHHHHHHHHhhCCCCCCCccccccccCCCCCeEEEeccCCEEEeCCCCEEEEccccccccccCCCCHHHHHHHHHHH
Confidence 36889999999999975432 222 3589999999999999999999999999999999999999999999999
Q ss_pred hhccccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCC
Q 011777 126 KLLQHATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALN 205 (477)
Q Consensus 126 ~~~~~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~ 205 (477)
+++.+. .+.++...+++++|++.+|. .++++|++|||||||.|+|+||.+++|.+||.|+++|||++.++++.++..
T Consensus 83 ~~~~~~--~~~~~~~~~la~~l~~~~p~-~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~ 159 (428)
T PRK12389 83 ENGVLY--GTPTELEIEFAKMLKEAIPS-LEKVRFVNSGTEAVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSG 159 (428)
T ss_pred HhCCcc--CCCCHHHHHHHHHHHHhCCC-CcEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCc
Confidence 986542 35678899999999999884 689999999999999999999999999999999999999999999887643
Q ss_pred CCCCCCCC-CCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHh
Q 011777 206 TWKYPIPQ-GEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKA 284 (477)
Q Consensus 206 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~ 284 (477)
.++...+. .++.....++.++.++++ .+.++++++.. .+++++||+||+++++|+++|+++||++|+++|++|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~d-----~~~l~~~l~~~-~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~ 233 (428)
T PRK12389 160 PSTLGTPDSAGVPKSIAQEVITVPFND-----IEALKEALDKW-GDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEA 233 (428)
T ss_pred ccccCCCCCCCCCCcccCceEEcCCCC-----HHHHHHHHHhc-CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHc
Confidence 32211111 122211223333444442 47788888633 467999999999999999999999999999999999
Q ss_pred CcEEEEcCcccCccCCCCCCccccccCCCcceeeecccccCccceEEEEeCHHHHHhhcc---cccccCCCCcHHHHHHH
Q 011777 285 GGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIGNGLPLGAVVTTPEIANVMAQ---KIQFNTFGGNPVCSAGG 361 (477)
Q Consensus 285 gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pig~v~~~~~~~~~~~~---~~~~~t~~~~~~~~aaa 361 (477)
|+++|+||||+|| |+| ..++.+++|+.||++|+||+++||+|+|++++++++++.+.. ..+++||++||++|+|+
T Consensus 234 g~llI~DEV~tG~-Rt~-~~~a~~~~gv~PDivt~gK~lggG~Pi~av~~~~~i~~~~~~~~~~~~~~T~~gnpl~~Aaa 311 (428)
T PRK12389 234 GALVIYDEVITAF-RFM-YGGAQDLLGVEPDLTALGKIIGGGLPIGAYGGRKDIMEQVAPLGPAYQAGTMAGNPASMAAG 311 (428)
T ss_pred CCEEEEEcccccc-ccC-cchhhHHhCCCCCeeeechhhcCCCceeEEeEHHHHHhhhccCCCcccccCCccCHHHHHHH
Confidence 9999999999999 898 566778899999999999999999999999999999998853 35788999999999999
Q ss_pred HHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceee-eccceeEEEEEeeCCCC-----CCccHHHHHHHHHHHHH
Q 011777 362 LAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDV-RGRGLMVGMELVTDRKE-----KTPAKAETAVLFEKLRE 435 (477)
Q Consensus 362 ~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v-~g~g~~~~i~~~~~~~~-----~~~~~~~~~~~~~~l~~ 435 (477)
+++|++++++++++++++++++|+++|+++.++++.+.++ ++.| ++++++..+... ..++......+.+.|++
T Consensus 312 la~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~v~r~~g-~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 390 (428)
T PRK12389 312 IACLEVLQQEGVYEKLDRLGAMLEEGILEAAEKHGITITINRLKG-ALTVYFTDEKVTNYDQAERSDGEAFGKFFKLMLN 390 (428)
T ss_pred HHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCc-EEEEEEeCCCCCChhhhcccCHHHHHHHHHHHHH
Confidence 9999999988999999999999999999998889987777 7777 778988754211 11233345778899999
Q ss_pred cCceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHHHhhC
Q 011777 436 LGVLVGKGGLHGNVFRIKPPMCFTKDDADFLVDALDYSMSKL 477 (477)
Q Consensus 436 ~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~l 477 (477)
+||++.+.+ .+. +.||+++|++||++++++|+++++++
T Consensus 391 ~Gv~~~~~~--~~~--~~~~l~~t~e~id~~~~~l~~~l~~~ 428 (428)
T PRK12389 391 QGINLAPSK--YEA--WFLTTAHTEEDIEETLEAVDRAFAQL 428 (428)
T ss_pred CCcEeecCC--CCC--eeecCCCCHHHHHHHHHHHHHHHHhC
Confidence 999998753 222 45799999999999999999999764
No 51
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=100.00 E-value=3.9e-68 Score=542.93 Aligned_cols=411 Identities=22% Similarity=0.326 Sum_probs=332.9
Q ss_pred CCCCCHHHHHHHHhhhcCCCcc---ccc----cCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHH
Q 011777 52 YTGPSADQVFQKRKQFLGPSIF---HYY----QKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQ 124 (477)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~---~~~----~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~ 124 (477)
+..++|.+++++.+++++-+.. ..+ +.|+++++|+|+||||.|||+||||.+|+++++|||+||+|.+|+.+|
T Consensus 48 ~~~~~S~~l~~ra~~~~pgGv~~~~r~~~~~~~~p~~~~~a~G~~l~D~dG~~yiD~~~g~g~~~lGh~~p~v~~av~~q 127 (474)
T PLN02482 48 FTTTKSEEIFKAAKELMPGGVNSPVRAFKSVGGQPIVFDRVKGSYAWDVDGNEYIDYVGSWGPAIIGHADDEVLAALAET 127 (474)
T ss_pred CCChHHHHHHHHHHhhCCCCCCCcchhhcccCCCCeeEEEeeeCEEEECCCCEEEEecccccccccCCCCHHHHHHHHHH
Confidence 4457899999999999974332 111 358999999999999999999999999999999999999999999999
Q ss_pred HhhccccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccC
Q 011777 125 SKLLQHATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTAL 204 (477)
Q Consensus 125 l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~ 204 (477)
++++.+. ...++...+|+++|++.+|. .++|+|+||||||++.|+|+||.+|||.+||.|+++|||+++........
T Consensus 128 l~~~~~~--~~~~~~~~~lAe~l~~~~p~-~~~v~f~~SGsEA~e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~ 204 (474)
T PLN02482 128 MKKGTSF--GAPCLLENVLAEMVIDAVPS-VEMVRFVNSGTEACMGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGS 204 (474)
T ss_pred HhhCCCC--CCCCHHHHHHHHHHHHhCCC-CCEEEEeCChHHHHHHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCC
Confidence 9986543 34678889999999999986 78999999999999999999999999999999999999988654433221
Q ss_pred CCCCCCCC-CCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHH
Q 011777 205 NTWKYPIP-QGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRK 283 (477)
Q Consensus 205 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~ 283 (477)
.......+ ..++.....++..+.++++ +++++++++. +++++++||+||+++++|+++|+++||++|+++|++
T Consensus 205 ~~~~~~~~~~~g~~~~~~~~~~~~~~nd-----~~~l~~~l~~-~~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~ 278 (474)
T PLN02482 205 GVATLGLPDSPGVPKAATSATLTAPYND-----LEAVKKLFEA-NKGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKE 278 (474)
T ss_pred CccccCCCCCCCCCCCCCCCeEEecCCC-----hHHHHHHHHh-CCCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHH
Confidence 11111011 1222222222233445553 4778888863 357899999999999999999999999999999999
Q ss_pred hCcEEEEcCcccCccCCCCCCccccccCCCcceeeecccccCccceEEEEeCHHHHHhhcc---cccccCCCCcHHHHHH
Q 011777 284 AGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIGNGLPLGAVVTTPEIANVMAQ---KIQFNTFGGNPVCSAG 360 (477)
Q Consensus 284 ~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pig~v~~~~~~~~~~~~---~~~~~t~~~~~~~~aa 360 (477)
||+++|+|||++|| |+| ..++.+++|+.||++||||+++||+|+|++++++++++.+.. ..+++||++||++++|
T Consensus 279 ~g~lLI~DEV~tGf-R~g-~~ga~~~~gv~PDi~t~gK~lggG~Pigav~g~~ei~~~~~~~~~~~~~~T~~gnpl~~aA 356 (474)
T PLN02482 279 NGALLVFDEVMTGF-RIA-YGGAQEYFGITPDLTTLGKVIGGGLPVGAYGGRREIMEMVAPAGPMYQAGTLSGNPLAMTA 356 (474)
T ss_pred cCCEEEEeccccCe-ecC-cchHhHHhCCCCCEEEecchhhCCCceEEEEEcHHHHHhhccCCCcccccCcchhHHHHHH
Confidence 99999999999999 998 678888999999999999999999999999999999998853 3477899999999999
Q ss_pred HHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCC-----CCCccHHHHHHHHHHHHH
Q 011777 361 GLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRK-----EKTPAKAETAVLFEKLRE 435 (477)
Q Consensus 361 a~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~-----~~~~~~~~~~~~~~~l~~ 435 (477)
++++|++++++++++++++++++|+++|+++..+++....+.+.+.|++++|..+.. .+.++......+.+.|++
T Consensus 357 ala~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~g~~~~~~~v~g~~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l~~ 436 (474)
T PLN02482 357 GIHTLKRLQQPGTYEYLDKITKKLIQGILEAGKKAGHEMCGGYISGMFGFFFTEGPVYNFADAKKSDTAKFARFHRGMLE 436 (474)
T ss_pred HHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHhcCCCEEEcccceEEEEEEecCCccChhhhccCCHHHHHHHHHHHHH
Confidence 999999998889999999999999999999987765332222333377888875421 122344456678899999
Q ss_pred cCceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHHHhhC
Q 011777 436 LGVLVGKGGLHGNVFRIKPPMCFTKDDADFLVDALDYSMSKL 477 (477)
Q Consensus 436 ~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~l 477 (477)
+||++.+.+... + .||+.+|++|||+++++++++++++
T Consensus 437 ~Gv~~~~~~~~~---~-~psl~ht~~dId~~l~al~~~l~~~ 474 (474)
T PLN02482 437 EGVYLAPSQFEA---G-FTSLAHTEEDIDFTIAAAERVLARI 474 (474)
T ss_pred CCeEEeccCCCC---C-cCCCCCCHHHHHHHHHHHHHHHHhC
Confidence 999998753211 2 3899999999999999999999764
No 52
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=2.3e-68 Score=538.73 Aligned_cols=374 Identities=30% Similarity=0.501 Sum_probs=329.2
Q ss_pred cCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCCCC
Q 011777 77 QKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGNLK 156 (477)
Q Consensus 77 ~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~~ 156 (477)
+.|+++++|+|+||||.|||+||||.+|++++++||+||+|++|+.+|++++.+....+.++...+|+++|++..|. .+
T Consensus 21 ~~~~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~~-~~ 99 (408)
T PRK04612 21 PRQVVLERGQGSRVWDDQGREYLDLAAGIAVCGLGHNDPDLVAALTEQAGKLWHTSNVFYSAPPLKLAEELVTASRF-AE 99 (408)
T ss_pred CCCceEEEeeeCEEEECCCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhhCCC-CC
Confidence 45789999999999999999999999999999999999999999999999876665456678889999999998875 37
Q ss_pred EEEEeCChHHHHHHHHHHHHhcc-------CCceEEEEccCccCCcccccccccCCCCCCCCC--CCCeeeecCCCCcCC
Q 011777 157 VVYFVNSGTEANELAMLMARLST-------GNLGMIALRNAYHGGSSGTIGLTALNTWKYPIP--QGEIHHVVNPDPYHG 227 (477)
Q Consensus 157 ~v~~~~sGseA~~~Al~~ar~~~-------~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 227 (477)
+++|++|||||||.|+|+||.++ +|.+||.|+++|||++.++++.++.+.++..+. ..++.+++.++
T Consensus 100 ~v~f~~sGseA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d---- 175 (408)
T PRK04612 100 KVFLCNSGTEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFND---- 175 (408)
T ss_pred EEEEcCchHHHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCCCC----
Confidence 99999999999999999999884 356799999999999999999887655443322 13344433221
Q ss_pred CCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccc
Q 011777 228 SFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGF 307 (477)
Q Consensus 228 ~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~ 307 (477)
.+.+++++. .+++++||+||+++++|++.++++|+++|+++|++||+++|+||||+||||+| .+|+.
T Consensus 176 ---------~~~l~~~~~---~~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G-~~~a~ 242 (408)
T PRK04612 176 ---------VEALEAAMA---GGDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTG-TLFAH 242 (408)
T ss_pred ---------HHHHHHhhC---CCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCC-chhhh
Confidence 467777775 46899999999999999999999999999999999999999999999999999 78887
Q ss_pred cccCCCcceeeecccccCccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHH
Q 011777 308 ETQGVIPDIVTMAKGIGNGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGR 387 (477)
Q Consensus 308 ~~~gv~pDivt~sK~lg~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~ 387 (477)
+.+++.||++||||++++|+|+|++++++++++.+....+.+||++||++|++++++|+.++++++.+++++++++++++
T Consensus 243 ~~~~~~pdi~t~~K~l~~G~piga~~~~~~~~~~~~~~~~~~t~~~~p~~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~ 322 (408)
T PRK04612 243 WQEQVTPDIVTLAKALGGGFPIGAMLAGPKVAETMQFGAHGTTFGGNPLAAAVARVALRKLASPQIAANVARQSAALRAG 322 (408)
T ss_pred hhcCCCCCEEEEcchhcCCCceEEEEECHHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 88899999999999999999999999999999888777788999999999999999999999899999999999999999
Q ss_pred HHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHHHH
Q 011777 388 LRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADFLV 467 (477)
Q Consensus 388 L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l 467 (477)
|+++.++++.+.+++|.|+|+++++..+. ......+.+.|+++||++.+.+ .+.+||.||+.+|++||++++
T Consensus 323 l~~l~~~~~~i~~vrg~Gl~~~i~~~~~~------~~~a~~i~~~l~~~Gvlv~~~g--~~~lRl~Ppl~it~eeid~~l 394 (408)
T PRK04612 323 LEALNAEFGVFAQVRGRGLMLGAVLAPAH------AGQAGAILDLAAEHGLLLLQAG--PDVLRFVPALNLTDAELADGL 394 (408)
T ss_pred HHHHHhhCCCeeeeeccceEEEEEecCch------hhHHHHHHHHHHHCCeEEeeCC--CCEEEEcCCccCCHHHHHHHH
Confidence 99999999999999999999999996321 1235678889999999998754 489999999999999999999
Q ss_pred HHHHHHHhh
Q 011777 468 DALDYSMSK 476 (477)
Q Consensus 468 ~~l~~~l~~ 476 (477)
++|++++.+
T Consensus 395 ~~l~~~l~~ 403 (408)
T PRK04612 395 ARLRLALAD 403 (408)
T ss_pred HHHHHHHHH
Confidence 999999864
No 53
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=100.00 E-value=1.7e-68 Score=541.78 Aligned_cols=384 Identities=26% Similarity=0.396 Sum_probs=328.4
Q ss_pred CceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhcccccc-ccCChHHHHHHHHHHhhC--CCC
Q 011777 78 KPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATT-IYLHHAIADFAEALASKM--PGN 154 (477)
Q Consensus 78 ~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~-~~~~~~~~~l~~~La~~~--~~~ 154 (477)
.|+++++|+|+||||.|||+||||.+|++++++||+||+|++|+++|+++..+... .+.++...+|+++|++.+ |.+
T Consensus 17 ~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~ 96 (412)
T TIGR02407 17 FPTVFEKAKGSTLWDEDGKEYIDFFAGAGALNYGHNNPKLKQALIDYLADDGIIHSLDMATEAKREFLETFNEIILKPRG 96 (412)
T ss_pred CCceEEecccCEEEeCCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhccceeccccCcHHHHHHHHHHHHhccCccC
Confidence 58999999999999999999999999999999999999999999999987544333 245788899999999985 322
Q ss_pred C-CEEEE-eCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCC--CCCCeeeecCCCCcCCCCC
Q 011777 155 L-KVVYF-VNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPI--PQGEIHHVVNPDPYHGSFG 230 (477)
Q Consensus 155 ~-~~v~~-~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 230 (477)
. ++++| +||||||||.|+|+||.+++|.+||+++++|||++.++++.++...++... +..++.+++.++...
T Consensus 97 ~~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~---- 172 (412)
T TIGR02407 97 LDYKVQFPGPTGTNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLG---- 172 (412)
T ss_pred CCceEEEeCCCchHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccc----
Confidence 3 25656 599999999999999999999999999999999999999988755443332 224566665554221
Q ss_pred CCHHHHHHHHHHHHhccC--CCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCcccc
Q 011777 231 SDAARYAQDLQDHIDFGT--SGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFE 308 (477)
Q Consensus 231 ~~~~~~~~~le~~i~~~~--~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~ 308 (477)
+...+++.++++++... .+++++||+||+|+++|+++++++||++|+++|++||++||+||||+||||+| ++|+++
T Consensus 173 -~~~~~~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG-~~~a~~ 250 (412)
T TIGR02407 173 -GDVDTIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTG-TFFSFE 250 (412)
T ss_pred -cchhHHHHHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc-hhHHhc
Confidence 11223567888876321 25789999999999999999999999999999999999999999999999999 788999
Q ss_pred ccCCCcceeeecccccC-ccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHh-hchhhHHHHHHHHHHHHHH
Q 011777 309 TQGVIPDIVTMAKGIGN-GLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRV-IDKERRQAHCADVGSHLLG 386 (477)
Q Consensus 309 ~~gv~pDivt~sK~lg~-G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~-l~~~~~~~~~~~~~~~l~~ 386 (477)
++++.||++++||++++ |+|+|++++++++ +.+....+.+||++||++++++.++|+. ++++++.++++++++++++
T Consensus 251 ~~~v~PDi~~~~K~lg~~G~pigav~~~~~~-~~~~~~~~~~T~~gnpl~~aaa~a~l~~~i~~~~l~~~~~~~g~~l~~ 329 (412)
T TIGR02407 251 PAGIEPDIVCLSKSISGYGLPLALTLIKPEL-DVWKPGEHNGTFRGNNLAFVTATAALEYYWSDDAFEKAVQRKSEIIQE 329 (412)
T ss_pred ccCCCCCEEEechhccCCccceeEEEEchhh-hccCCCccCCCCCccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHH
Confidence 99999999999999998 9999999999987 6665567889999999999999999995 7778899999999999999
Q ss_pred HHHHHHHhCC-CceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHH
Q 011777 387 RLRTLQERHD-IIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADF 465 (477)
Q Consensus 387 ~L~~l~~~~~-~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~ 465 (477)
+|+++.++++ .+.++++.|+|+++++.. ......+.+.|+++||++.+.+..++.|||.||+++|++|+++
T Consensus 330 ~l~~l~~~~~~~~~~vrg~Gl~~~l~l~~--------~~~~~~~~~~~~~~Gv~v~~~~~~~~~lr~~p~l~~t~~~i~~ 401 (412)
T TIGR02407 330 RLDRIVAEYPELIKQVRGRGLMQGIECGD--------GDLAGKIAKAAFENGLIIETSGPNDEVIKLLPPLTIDEETLQQ 401 (412)
T ss_pred HHHHHHhhCCCceEeeecceeEEEEEecC--------hHHHHHHHHHHHHCCCEEeccCCCCCEEEEECCCCCCHHHHHH
Confidence 9999988887 678999999999999942 2345678899999999998766557899999999999999999
Q ss_pred HHHHHHHHHhh
Q 011777 466 LVDALDYSMSK 476 (477)
Q Consensus 466 ~l~~l~~~l~~ 476 (477)
++++|++++++
T Consensus 402 ~~~~l~~~l~~ 412 (412)
T TIGR02407 402 GLDILEQAVEE 412 (412)
T ss_pred HHHHHHHHHhC
Confidence 99999999864
No 54
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=100.00 E-value=1.7e-68 Score=529.75 Aligned_cols=355 Identities=35% Similarity=0.565 Sum_probs=311.3
Q ss_pred ccCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCCC
Q 011777 76 YQKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGNL 155 (477)
Q Consensus 76 ~~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~ 155 (477)
|..|+.+++|+|+|+||.|||+||||.+|++++++||+||+|++|+++|++++.+....+.++...+++++|++.. +.
T Consensus 4 ~~~~~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~la~~l~~~~--~~ 81 (364)
T PRK04013 4 YRKRLRLVRGEGIYVWDSQGRRYLDLIAGIGVNVLGHNHPEWVEEMSEQLEKLVVAGPMFEHEEKEEMLEELSKWV--NY 81 (364)
T ss_pred cCCCccEEEeecCEEEECCCCEEEEcccChhhccCCCCCHHHHHHHHHHHHhcCCccCCcCCHHHHHHHHHHHhhc--CC
Confidence 5678999999999999999999999999999999999999999999999999776655677899999999999987 35
Q ss_pred CEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCC--CCeeeecCCCCcCCCCCCCH
Q 011777 156 KVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQ--GEIHHVVNPDPYHGSFGSDA 233 (477)
Q Consensus 156 ~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 233 (477)
++++|+||||||++.|+|+||.+++|++||+++++|||++.++++.++.+.++....+ .++.+++.++
T Consensus 82 ~~v~~~~SGseA~e~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~~d---------- 151 (364)
T PRK04013 82 EYVYMGNSGTEAVEAALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPFND---------- 151 (364)
T ss_pred CEEEEeCchHHHHHHHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecCCC----------
Confidence 7999999999999999999999999999999999999999999998876554433322 3444443221
Q ss_pred HHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCC
Q 011777 234 ARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVI 313 (477)
Q Consensus 234 ~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~ 313 (477)
.+++++.+. +++++||+||++|++|+++++++||++|+++|++||+++|+||||+|| |+| ++|+++++++.
T Consensus 152 ---~~~l~~~i~----~~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~-RtG-~~~a~~~~gv~ 222 (364)
T PRK04013 152 ---VEAAKEAIT----KETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTG-KFLAIEHYKVE 222 (364)
T ss_pred ---HHHHHHHhc----CCcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcC-CCC-chhHHHhcCCC
Confidence 366777775 579999999999999999999999999999999999999999999999 999 79999999999
Q ss_pred cceeeecccccCccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHH
Q 011777 314 PDIVTMAKGIGNGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQE 393 (477)
Q Consensus 314 pDivt~sK~lg~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~ 393 (477)
||++|+||+++||+|+|+++.++++. ...|++||++||++|+|++++|++++++++.+++++. |.++.
T Consensus 223 PDiv~~gK~lggG~P~~a~~~~~~~~----~~~~~~T~~gnp~~~aaa~a~l~~i~~~~l~~~~~~~-------l~~l~- 290 (364)
T PRK04013 223 PDIVTMGKGIGNGVPVSLTLTNFDVE----RGKHGSTFGGNPLACKAVAVTLRILRRERLVEKAGEK-------FIEIK- 290 (364)
T ss_pred CCEEEecccccCCceeEEEEeccccc----CCCcCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHH-------HHHhc-
Confidence 99999999999999999999998862 3458899999999999999999999999999988774 33332
Q ss_pred hCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHH
Q 011777 394 RHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADFLVDALDYS 473 (477)
Q Consensus 394 ~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~ 473 (477)
.+.+.++||.|+|+++++.. + ...+.+.++++|+++.+.+ .+++||.||+++|++|+++++++|+++
T Consensus 291 -~~~v~~vRG~Gl~~gve~~~------~----~~~i~~~~~~~Gll~~~~g--~~vlr~~Ppl~it~~~i~~~~~~l~~~ 357 (364)
T PRK04013 291 -GERVVTTRGRGLMIGIVLKK------P----VGKYVEELQNRGYLVHTAG--QRVIRLLPPLIISKDTMEEAKSAIEGV 357 (364)
T ss_pred -cCcceeeeeCcEEEEEEeCC------c----HHHHHHHHHhCCcEEeeCC--CCEEEEeCCcccCHHHHHHHHHHHHHH
Confidence 36789999999999999953 1 3468889999999998754 589999999999999999999999999
Q ss_pred Hhh
Q 011777 474 MSK 476 (477)
Q Consensus 474 l~~ 476 (477)
+.+
T Consensus 358 l~~ 360 (364)
T PRK04013 358 IND 360 (364)
T ss_pred HHH
Confidence 875
No 55
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=100.00 E-value=5.5e-68 Score=540.60 Aligned_cols=384 Identities=26% Similarity=0.430 Sum_probs=327.6
Q ss_pred CceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhcccccc-ccCChHHHHHHHHHHhhC--CCC
Q 011777 78 KPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATT-IYLHHAIADFAEALASKM--PGN 154 (477)
Q Consensus 78 ~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~-~~~~~~~~~l~~~La~~~--~~~ 154 (477)
.|+++++|+|+||||.|||+||||.+|+++++|||+||+|.+|+++|+++..+... .+.++...+|+++|++.+ |.+
T Consensus 21 ~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~ 100 (425)
T PRK09264 21 FPVVFDKAKGSWLYDEDGKEYIDFFAGAGALNYGHNNPVLKQALIDYLQRDGITHGLDMHTTAKREFLETFEETILKPRG 100 (425)
T ss_pred CCccEEeeecCEEEeCCCCEeeecccchhhccCCCCCHHHHHHHHHHHHhcccccccccCcHHHHHHHHHHHHhhcCCcC
Confidence 58999999999999999999999999999999999999999999999987544333 345788899999999975 333
Q ss_pred CC-EEEE-eCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCC--CCCCeeeecCCCCcCCCCC
Q 011777 155 LK-VVYF-VNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPI--PQGEIHHVVNPDPYHGSFG 230 (477)
Q Consensus 155 ~~-~v~~-~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 230 (477)
.+ +++| +||||||||.|+|+||.+++|.+||+++++|||++.++++.++...++... +..++.++++|+.++..
T Consensus 101 ~~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-- 178 (425)
T PRK09264 101 LDYKVQFTGPTGTNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGD-- 178 (425)
T ss_pred CCceEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccc--
Confidence 43 6766 589999999999999999999999999999999999999998765444322 22467777766543221
Q ss_pred CCHHHHHHHHHHHHhccC--CCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCcccc
Q 011777 231 SDAARYAQDLQDHIDFGT--SGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFE 308 (477)
Q Consensus 231 ~~~~~~~~~le~~i~~~~--~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~ 308 (477)
...+++++++++... .+++++||+||+++++|+++++++||++|+++|++||++||+||||+||||+| .+|+++
T Consensus 179 ---~~~~~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG-~~~~~~ 254 (425)
T PRK09264 179 ---VDTLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTG-TFFSFE 254 (425)
T ss_pred ---hhHHHHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCcccc-HHHHHh
Confidence 123577888886322 25799999999999999999999999999999999999999999999999999 788899
Q ss_pred ccCCCcceeeecccccC-ccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHH-HhhchhhHHHHHHHHHHHHHH
Q 011777 309 TQGVIPDIVTMAKGIGN-GLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVL-RVIDKERRQAHCADVGSHLLG 386 (477)
Q Consensus 309 ~~gv~pDivt~sK~lg~-G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l-~~l~~~~~~~~~~~~~~~l~~ 386 (477)
++++.||++|+||++++ |+|+|++++++++. .+....+.+||++||+++++++++| ++++++++.++++++++++++
T Consensus 255 ~~~v~PDi~t~~K~l~~~G~pigav~~~~~i~-~~~~~~~~~T~~gnp~~~aaa~a~l~~~~~~~~l~~~~~~~g~~l~~ 333 (425)
T PRK09264 255 RAGITPDIVTLSKSISGYGLPMALVLIKPELD-VWKPGEHNGTFRGNNLAFVTATAALEEYWSDDAFEKEVKAKGELVRE 333 (425)
T ss_pred hcCCCCCEEEeccccCCCccceEEEEEchhhh-ccCCCccCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 99999999999999998 99999999999974 5555567889999999999999999 666667899999999999999
Q ss_pred HHHHHHHhCCC-ceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHH
Q 011777 387 RLRTLQERHDI-IGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADF 465 (477)
Q Consensus 387 ~L~~l~~~~~~-~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~ 465 (477)
+|+++..+++. +.++++.|+++++++.. ......+.+.++++||++.+.+.+.+.|||+||+++|++||++
T Consensus 334 ~l~~l~~~~~~~~~~vrg~Gl~~~i~l~~--------~~~~~~l~~~~~~~Gv~~~~~~~~~~~lr~~p~l~~t~~ei~~ 405 (425)
T PRK09264 334 RLEEIAAKYPGLGAEVRGRGMMQGIDFGD--------GELAGKIAAEAFENGLIIETSGPEDEVVKLLPPLTIDEEELEE 405 (425)
T ss_pred HHHHHHHhCCCceecceecccEEEEEecC--------hHHHHHHHHHHHHCCCEEeccCCCCCEEEEeCCCCCCHHHHHH
Confidence 99999877874 47899999999999842 2345678899999999998876566899999999999999999
Q ss_pred HHHHHHHHHhh
Q 011777 466 LVDALDYSMSK 476 (477)
Q Consensus 466 ~l~~l~~~l~~ 476 (477)
++++|++++++
T Consensus 406 ~~~~l~~~l~~ 416 (425)
T PRK09264 406 GLDILEEAVAE 416 (425)
T ss_pred HHHHHHHHHHH
Confidence 99999998864
No 56
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=3.5e-67 Score=535.53 Aligned_cols=383 Identities=30% Similarity=0.440 Sum_probs=330.7
Q ss_pred CceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhcccccc-ccCChHHHHHHHHHHhhCCCCCC
Q 011777 78 KPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATT-IYLHHAIADFAEALASKMPGNLK 156 (477)
Q Consensus 78 ~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~-~~~~~~~~~l~~~La~~~~~~~~ 156 (477)
.|+++++|+|+||||.|||+||||.+|++++++||+||+|++|+++|++++.+... .+.++...+|+++|++.+|.+.+
T Consensus 24 ~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~ 103 (423)
T PRK05964 24 PPIPIVRAEGAYLYLADGRELIDAISSWWVATHGHNHPYIDQAIREQLDRLDHVIFAGFTHEPAERLAQRLVALTPGGLD 103 (423)
T ss_pred CCeeEEeccccEEEeCCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHhhCCCccccccCCHHHHHHHHHHHHhCCCCCC
Confidence 58999999999999999999999999999999999999999999999998765443 46788899999999999987678
Q ss_pred EEEEeCChHHHHHHHHHHHHhc------cCCceEEEEccCccCCcccccccccCCCCCCCCCC--CCeeeecCCCCcCCC
Q 011777 157 VVYFVNSGTEANELAMLMARLS------TGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQ--GEIHHVVNPDPYHGS 228 (477)
Q Consensus 157 ~v~~~~sGseA~~~Al~~ar~~------~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 228 (477)
+++|++||+||+|.|+|+||.+ ++|.+||+++++|||++.+++++++...++....+ .++.++++|.
T Consensus 104 ~v~f~~sGseA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~----- 178 (423)
T PRK05964 104 HVFFSDSGSVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPP----- 178 (423)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCc-----
Confidence 9999999999999999999988 68899999999999999999998775544322211 2344454432
Q ss_pred CCCCHHHHHHHHHHHHhccCCCCeeEEEecc-cCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccc
Q 011777 229 FGSDAARYAQDLQDHIDFGTSGKVAGFIAET-IQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGF 307 (477)
Q Consensus 229 ~~~~~~~~~~~le~~i~~~~~~~~a~vi~ep-i~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~ 307 (477)
++....+++++++++.. +.+++++||+|| +++++|+++++++||++|+++|++||++||+||||+||||+| .+|++
T Consensus 179 -~d~~~~~~~~l~~~l~~-~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G-~~~a~ 255 (423)
T PRK05964 179 -DGYEQATLDALEALLEK-HAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTG-TLFAC 255 (423)
T ss_pred -chhHHHHHHHHHHHHHh-CCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCc-chhHH
Confidence 11223456788888863 346899999999 799999999999999999999999999999999999999999 78888
Q ss_pred cccCCCcceeeecccccCc-cceEEEEeCHHHHHhhccc------ccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHH
Q 011777 308 ETQGVIPDIVTMAKGIGNG-LPLGAVVTTPEIANVMAQK------IQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADV 380 (477)
Q Consensus 308 ~~~gv~pDivt~sK~lg~G-~pig~v~~~~~~~~~~~~~------~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~ 380 (477)
+++++.||++++||+++|| +|+|++++++++++.+... .+++||++||+++++++++|++++++++.+++.++
T Consensus 256 ~~~~v~pDi~~~~K~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~l~~~~~~~~~~~~ 335 (423)
T PRK05964 256 EQAGVSPDIMCLSKGLTGGYLPLAATLCTAEIFEAFYSDDRAKAFMHSPSYTANPLACAAANASLDLFEDEPVLERVAAL 335 (423)
T ss_pred HhcCCCCCeeeeehhhhcCcccceEEEEcHHHHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 9999999999999999988 8999999999999987532 47789999999999999999999888999999999
Q ss_pred HHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCCCCEEEEeCCCCCcH
Q 011777 381 GSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLHGNVFRIKPPMCFTK 460 (477)
Q Consensus 381 ~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~ 460 (477)
+++++++|+++. +++.+.++++.|+|+++++..+.. ......+.+.|.++||++.+. ++.+||+||+.+|+
T Consensus 336 g~~l~~~l~~l~-~~~~i~~vrg~Gl~~~i~l~~~~~-----~~~~~~l~~~l~~~Gv~v~~~---~~~lR~~p~l~~t~ 406 (423)
T PRK05964 336 SAGLAEGLEPFR-DLPGVADVRVLGAIGAVELDRPVL-----ERDGPALRAFALERGVLLRPL---GNTIYLMPPYIITA 406 (423)
T ss_pred HHHHHHHHHhhc-cCCCeEEeecccEEEEEEeccCcc-----hhHHHHHHHHHHHCCeEEEec---CCEEEEeCCcccCH
Confidence 999999999884 477778899999999999954310 123567889999999999874 47899999999999
Q ss_pred HHHHHHHHHHHHHHhhC
Q 011777 461 DDADFLVDALDYSMSKL 477 (477)
Q Consensus 461 e~i~~~l~~l~~~l~~l 477 (477)
+|||+++++|+++++++
T Consensus 407 edId~~v~~l~~al~~~ 423 (423)
T PRK05964 407 EELDRITDAIVEVADEL 423 (423)
T ss_pred HHHHHHHHHHHHHHhhC
Confidence 99999999999999875
No 57
>PLN00144 acetylornithine transaminase
Probab=100.00 E-value=4.9e-67 Score=526.39 Aligned_cols=366 Identities=33% Similarity=0.531 Sum_probs=323.6
Q ss_pred EEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCCCCEEEEe
Q 011777 82 IVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGNLKVVYFV 161 (477)
Q Consensus 82 ~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~ 161 (477)
+++|+|+|+||.|||+||||.+|++++++||+||+|++|+.+|++++.+....+.++...+|+++|++..+ .++|+|+
T Consensus 1 ~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~v~f~ 78 (382)
T PLN00144 1 FVSGKGCKLYDVEGKEYLDMAAGIAVNALGHGDPDWVKAVAEQAGTLAHVSNVYHTIPQVELAKRLVASSF--ADRVFFC 78 (382)
T ss_pred CeeeeccEEEeCCCCEEEECCcCHHhccCCCCCHHHHHHHHHHHHhcCCccccccCHHHHHHHHHHHhcCC--CCeEEEe
Confidence 46899999999999999999999999999999999999999999987765555568889999999999874 4799999
Q ss_pred CChHHHHHHHHHHHHhccC-------------CceEEEEccCccCCcccccccccCCCCCCCCCC--CCeeeecCCCCcC
Q 011777 162 NSGTEANELAMLMARLSTG-------------NLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQ--GEIHHVVNPDPYH 226 (477)
Q Consensus 162 ~sGseA~~~Al~~ar~~~~-------------~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 226 (477)
+|||||+|.|+|+||.+++ +.+||+++++|||++.++++.++...++..+.+ +++.++++++
T Consensus 79 ~sGseA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d--- 155 (382)
T PLN00144 79 NSGTEANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEYGN--- 155 (382)
T ss_pred CCcHHHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCCCC---
Confidence 9999999999999999875 468999999999999999998876544433221 3444443322
Q ss_pred CCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCcc
Q 011777 227 GSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWG 306 (477)
Q Consensus 227 ~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~ 306 (477)
++.+++++. .+++++||+||+||++|+..++++|+++|+++|++||+++|+||||+||||+| .+|+
T Consensus 156 ----------~~~l~~~~~---~~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g-~~~~ 221 (382)
T PLN00144 156 ----------LEAARKLIQ---KGKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTG-YLWA 221 (382)
T ss_pred ----------HHHHHHhcC---CCCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc-hHhh
Confidence 477887774 36899999999999999889999999999999999999999999999999999 6888
Q ss_pred ccccCCCcceeeecccccCccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHH
Q 011777 307 FETQGVIPDIVTMAKGIGNGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLG 386 (477)
Q Consensus 307 ~~~~gv~pDivt~sK~lg~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~ 386 (477)
++++++.||++||||++++|+|+|++++++++++.+....+.+||++||+++++++++|++++++++.++++++++++++
T Consensus 222 ~~~~~~~PDi~t~sK~l~~G~pig~v~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~ 301 (382)
T PLN00144 222 HEAYGVEPDIMTLAKPLAGGLPIGAVLVTEKVASAINPGDHGSTFAGGPLVCNAALAVLDKISKPGFLASVAKKGEYLRE 301 (382)
T ss_pred hhhcCCCCCEEEecccccCCcceEEEEEcHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHH
Confidence 88899999999999999999999999999999999877778899999999999999999999988999999999999999
Q ss_pred HHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHHH
Q 011777 387 RLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADFL 466 (477)
Q Consensus 387 ~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~ 466 (477)
.|+++..+++.+.++++.|+|+|+++.. ....+.+.++++||++.+++. +++|||+||+++++++++++
T Consensus 302 ~l~~~~~~~~~~~~vrg~G~~~~l~l~~----------~~~~~~~~~~~~Gv~i~~~~~-~~~lrl~p~~~~~~~~i~~~ 370 (382)
T PLN00144 302 LLRRKLGGNPHVKEVRGVGLLVGIQLDV----------PAGPLVDACRDSGLLVLTAGK-GDVVRLVPPLVISEAELEQA 370 (382)
T ss_pred HHHHHHhhCCCceeeecCceEEEEEecC----------ccHHHHHHHHHCCeEEeecCC-CCEEEEeCCCccCHHHHHHH
Confidence 9999988888889999999999999921 124688899999999988743 58999999999999999999
Q ss_pred HHHHHHHHhhC
Q 011777 467 VDALDYSMSKL 477 (477)
Q Consensus 467 l~~l~~~l~~l 477 (477)
+++|++++.++
T Consensus 371 ~~~l~~~l~~~ 381 (382)
T PLN00144 371 VEILADCLPAL 381 (382)
T ss_pred HHHHHHHHHhc
Confidence 99999998753
No 58
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=100.00 E-value=1.8e-66 Score=526.26 Aligned_cols=372 Identities=30% Similarity=0.510 Sum_probs=326.5
Q ss_pred cCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCCCC
Q 011777 77 QKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGNLK 156 (477)
Q Consensus 77 ~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~~ 156 (477)
..|+++++|+|+|+||.|||+||||.+|+++.+|||+||+|++|+.+|++++.+....+.++...+|+++|++..+. +
T Consensus 16 ~~~~~~~~~~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~L~~~~~~--~ 93 (397)
T TIGR03246 16 PAPFIPVRGEGSRVWDQQGKEYIDFAGGIAVNALGHAHPELVKALIEQADKLWHIGNGYTNEPVLRLAKKLVDATFA--D 93 (397)
T ss_pred CCCceEEEeecCEEEeCCCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhcccccCccCCHHHHHHHHHHHhhCCC--C
Confidence 45799999999999999999999999999999999999999999999999865544446678889999999998853 6
Q ss_pred EEEEeCChHHHHHHHHHHHHhcc------CCceEEEEccCccCCcccccccccCCCCCCCCC--CCCeeeecCCCCcCCC
Q 011777 157 VVYFVNSGTEANELAMLMARLST------GNLGMIALRNAYHGGSSGTIGLTALNTWKYPIP--QGEIHHVVNPDPYHGS 228 (477)
Q Consensus 157 ~v~~~~sGseA~~~Al~~ar~~~------~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 228 (477)
+++|++||+|||+.|+|+||.++ +|.+||+++++|||++.++++.++...++..+. ..++.+++.++
T Consensus 94 ~~~f~~SGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d----- 168 (397)
T TIGR03246 94 KVFFCNSGAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPYND----- 168 (397)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCCCC-----
Confidence 99999999999999999999885 788999999999999998888876544332221 13444443222
Q ss_pred CCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCcccc
Q 011777 229 FGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFE 308 (477)
Q Consensus 229 ~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~ 308 (477)
++++++++. +++++||+||+++++|+++|+++||++|+++|++||+++|+||||+||||+| .+|+++
T Consensus 169 --------~~~l~~~l~----~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G-~~~a~~ 235 (397)
T TIGR03246 169 --------LAAAKALIS----DKTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTG-ELYAYM 235 (397)
T ss_pred --------HHHHHHHhc----cCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccc-cchhhh
Confidence 577888775 4799999999999999999999999999999999999999999999999999 788888
Q ss_pred ccCCCcceeeecccccCccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHH
Q 011777 309 TQGVIPDIVTMAKGIGNGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRL 388 (477)
Q Consensus 309 ~~gv~pDivt~sK~lg~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L 388 (477)
++++.||++|+||++++|+|+|++++++++++.+....+++||++||+++++++++|+.++++++.+++++++++++++|
T Consensus 236 ~~gv~pDi~t~~K~lggG~pigav~~~~~i~~~~~~~~~~~t~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~~~~l~~~L 315 (397)
T TIGR03246 236 HYGVTPDILTSAKALGGGFPIGAMLTTTEIAAHLKVGTHGTTYGGNPLACAVAGKVLDLVNTPELLAGVKQRHDLFVDGL 315 (397)
T ss_pred hcCCCCCEEEeehhhhCCcceeEEEEcHHHHHhccCCCcCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999987767888999999999999999999888889999999999999999
Q ss_pred HHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHHHHH
Q 011777 389 RTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADFLVD 468 (477)
Q Consensus 389 ~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~ 468 (477)
+++..+++.+.++++.|+++++++..+ .......+.+.|+++|+++.+.+ .+++||+||+.+|++||+++++
T Consensus 316 ~~l~~~~~~~~~vrg~G~~~~i~~~~~------~~~~~~~~~~~l~~~Gv~~~~~g--~~~lR~~p~~~~t~~~i~~~~~ 387 (397)
T TIGR03246 316 EKINARYNVFSEIRGKGLLIGAVLTEA------YQGKAKQFVNAAAEEGVIALIAG--PNVVRFAPSLVISDDDIDEGLA 387 (397)
T ss_pred HHHHhcCCCeEeeecCceEEEEEEcCc------hhhHHHHHHHHHHHCCeEEeecC--CCEEEEeCCCCCCHHHHHHHHH
Confidence 999877888899999999999998532 11235678899999999998754 4799999999999999999999
Q ss_pred HHHHHHhh
Q 011777 469 ALDYSMSK 476 (477)
Q Consensus 469 ~l~~~l~~ 476 (477)
+|++++.+
T Consensus 388 ~l~~~l~~ 395 (397)
T TIGR03246 388 RFERAIEQ 395 (397)
T ss_pred HHHHHHHH
Confidence 99999875
No 59
>PRK07046 aminotransferase; Validated
Probab=100.00 E-value=3.8e-66 Score=527.87 Aligned_cols=401 Identities=23% Similarity=0.265 Sum_probs=327.3
Q ss_pred CCCHHHHHHHHhhhcCCCc-cc---cc--cCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhh
Q 011777 54 GPSADQVFQKRKQFLGPSI-FH---YY--QKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKL 127 (477)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~-~~---~~--~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~ 127 (477)
.|+|.+++++.+++++-+. .. .+ ..|+++++|+|+||||.|||+||||.+++++++|||+||+|++|+.+|+++
T Consensus 27 ~~~S~~l~~ra~~~~p~g~~~~~~~~~~~~~p~~~~~a~G~~v~D~DG~~yiD~~~g~g~~~lGh~~p~i~~Av~~q~~~ 106 (453)
T PRK07046 27 HPRSRALAARAAQHLLGGVPMHWMNDWPTPFPLFVAEARGARFTDVDGHRYDDFCLGDTGAMFGHSPAPVARALAEQARR 106 (453)
T ss_pred ChhhHHHHHHHHhhCCCCcccccccccCCCCCCeEEeeeeCEEEeCCCCEEEEecccccccccCCCCHHHHHHHHHHHHh
Confidence 4678999999999997544 21 12 468999999999999999999999999999999999999999999999998
Q ss_pred ccccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccc--cCC
Q 011777 128 LQHATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLT--ALN 205 (477)
Q Consensus 128 ~~~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~--~~~ 205 (477)
+.+ ..+.++...+|+++|++..+ .++|+|+||||||++.|+|+||.+|||++||.|+++|||++++++... +..
T Consensus 107 ~~~--~~~~~~~~~~lAe~l~~~~~--~~~v~F~nSGtEA~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~ 182 (453)
T PRK07046 107 GLT--TMLPSEDAAWVGEELARRFG--LPYWQVATTATDANRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRP 182 (453)
T ss_pred CCC--CCCCCHHHHHHHHHHHHHhC--CCEEEEECCHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCC
Confidence 643 23568889999999999984 689999999999999999999999999999999999999987766542 111
Q ss_pred CCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhC
Q 011777 206 TWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAG 285 (477)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~g 285 (477)
..+... .+......++....+|++ ++.+++++. .+++++||+||+++++|.++|+++||++|+++|++||
T Consensus 183 ~~~~~~--~g~~~~~~~~~~~~~~nd-----~~~l~~~l~---~~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g 252 (453)
T PRK07046 183 VQRPGL--LGQVHDLTATTRVVEFND-----LAALEAALA---DGDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYG 252 (453)
T ss_pred CCCCCC--CCCCccccCceEeeCCCC-----HHHHHHHhC---CCCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhC
Confidence 111111 111100011122234443 577888774 4689999999999999999999999999999999999
Q ss_pred cEEEEcCcccCccCCCCCCccccccCCCcceeeecccccCccceEEEEeCHHHHHhhcc---------cccccCCCCcHH
Q 011777 286 GVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIGNGLPLGAVVTTPEIANVMAQ---------KIQFNTFGGNPV 356 (477)
Q Consensus 286 illI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pig~v~~~~~~~~~~~~---------~~~~~t~~~~~~ 356 (477)
+++|+|||+| | |.| .....+++|+.||++||||+++||+|+|++++++++++.+.. ..+++||++||+
T Consensus 253 ~llI~DEV~t-f-r~g-~Gg~~~~~gv~PDi~t~gK~lggG~Pi~av~g~~~i~~~~~~~~~~~~~~~~~~~~T~~gnpl 329 (453)
T PRK07046 253 TLLVIDETHT-I-SSG-PGGYTRAHGLEPDFLVVGKPIAGGVPCAVYGFSAELAERAQAAKASAPPGHSGIGTTLSANAL 329 (453)
T ss_pred CEEEEEcccc-C-ccC-CcchhHHhCCCccceeehhhhcCCCcceeeeehHHHHHHHhhccccCCCCCceeCCCCcccHH
Confidence 9999999998 4 233 111236689999999999999999999999999999998752 136789999999
Q ss_pred HHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCC-----C-ccHHHHHHHH
Q 011777 357 CSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEK-----T-PAKAETAVLF 430 (477)
Q Consensus 357 ~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~-----~-~~~~~~~~~~ 430 (477)
+|+|++++|++++++++++++++++++|+++|+++..+++.+..+++.|+++.+.+.++.... . .+......+.
T Consensus 330 ~~aa~~a~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (453)
T PRK07046 330 AMAAMRATLAEVMTEAAYAHMLALAARLAAGLRAVIARHGLPWHVTRVGARVEFQFAPTPPRNGAEAAAALDPELEAALH 409 (453)
T ss_pred HHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCcEEEEEEeCCCCCCHHHHhcccCHHHHHHHH
Confidence 999999999999888899999999999999999999899999999999999998885432110 1 1233456788
Q ss_pred HHHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 431 EKLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 431 ~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
..|+++||++.+. ++.++++|+ +|++|||++++++++++++
T Consensus 410 ~~~~~~Gv~~~~~---~~~~~~~p~--~t~~did~~~~~~~~~l~~ 450 (453)
T PRK07046 410 LYLLNRGVLITPF---HNMMLVCPA--TTAADVDRLVAAFDACLGE 450 (453)
T ss_pred HHHHHCCCEEecc---cCcEEEeCC--CCHHHHHHHHHHHHHHHHH
Confidence 8899999999863 467888876 8999999999999999875
No 60
>PRK08297 L-lysine aminotransferase; Provisional
Probab=100.00 E-value=3.8e-66 Score=527.48 Aligned_cols=382 Identities=29% Similarity=0.428 Sum_probs=313.9
Q ss_pred ceeEEeeeccEEEeC-CCCEEEeecCCcccccCCCCCHHHHH--HHHHHHhhccc--cc-cccCChHHHHHHHHHHhhC-
Q 011777 79 PLNIVEGKMQYLFDE-NGRRYLDAFAGIVTVSCGHCHPDVLN--AIFEQSKLLQH--AT-TIYLHHAIADFAEALASKM- 151 (477)
Q Consensus 79 p~~~~~g~G~~~~d~-dG~~ylD~~~g~~~~~lGh~~p~v~~--Av~~~l~~~~~--~~-~~~~~~~~~~l~~~La~~~- 151 (477)
++.+++|+|+||||. |||+||||.+|++++++||+||+|++ |+.+|++++.+ .. ..+.++...+++++|++..
T Consensus 27 ~~~i~~a~G~~l~D~~dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~ql~~l~~~~~~~~~~~~~~~~~la~~l~~~~~ 106 (443)
T PRK08297 27 VLDLERSQGSYLVDARTGRRYLDMFTFFASSALGMNHPALADDPEFRAELGRAALNKPSNSDVYTVEMARFVDTFARVLG 106 (443)
T ss_pred ceEEEeccCCEEEECCCCCEeeecccCHhhhcCCCCChHHhhHHHHHHHHHHhhhhccccCCcCCHHHHHHHHHHHhhcC
Confidence 355899999999995 99999999999999999999999999 99999988653 22 2456788899999999987
Q ss_pred CCCCCEEEEeCChHHHHHHHHHHHHhcc------------CCceEEEEccCccCCcccccccccCCCC-CCCCCCCCeee
Q 011777 152 PGNLKVVYFVNSGTEANELAMLMARLST------------GNLGMIALRNAYHGGSSGTIGLTALNTW-KYPIPQGEIHH 218 (477)
Q Consensus 152 ~~~~~~v~~~~sGseA~~~Al~~ar~~~------------~~~~ii~~~~~yhG~~~~~~~~~~~~~~-~~~~~~~~~~~ 218 (477)
|.+.++|+|+|||+||||.|+|+||.|+ +|.+||+++++|||++.+++++++.... +...+..+..+
T Consensus 107 p~~~~~v~f~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~ 186 (443)
T PRK08297 107 DPELPHLFFVDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPR 186 (443)
T ss_pred CCCCCEEEEeCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccc
Confidence 6667899999999999999999999873 2578999999999999999999864322 11111112222
Q ss_pred ecCCCCcCCCCC-CC-------HHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEE
Q 011777 219 VVNPDPYHGSFG-SD-------AARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIA 290 (477)
Q Consensus 219 ~~~~~~~~~~~~-~~-------~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~ 290 (477)
++.|.. ..++. .+ ...+++++++++.. +++++++||+||+|+++|+++|+++||++|+++|++||+++|+
T Consensus 187 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~ 264 (443)
T PRK08297 187 IDNPKL-RFPLPGEDLEEVEALEAEALAQARAAFER-HPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIF 264 (443)
T ss_pred cCCCCC-CCCCcccccchhhHHHHHHHHHHHHHHHh-CCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEE
Confidence 222222 11110 00 12245667777763 4578999999999999999999999999999999999999999
Q ss_pred cCcccCccCCCCCCccccccCCCcceeeecccccCccceEEEEeCHHHHHhh----c-ccccccCCCCcHHHHHHHHHHH
Q 011777 291 DEVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIGNGLPLGAVVTTPEIANVM----A-QKIQFNTFGGNPVCSAGGLAVL 365 (477)
Q Consensus 291 DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pig~v~~~~~~~~~~----~-~~~~~~t~~~~~~~~aaa~a~l 365 (477)
|||||||||+| .+|+++++++.||++||||++. +|++++.+++.+.+ . ...+++||++||++|++++++|
T Consensus 265 DEV~tGfGRtG-~~~a~~~~gv~PDiv~~gK~l~----~~a~l~~~~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L 339 (443)
T PRK08297 265 DEVQTGVGLTG-TAWAYQQLGVRPDIVAFGKKTQ----VCGIMAGRRVDEVEDNVFAVSSRINSTWGGNLVDMVRARRIL 339 (443)
T ss_pred echhhccCccc-hHHHHHhcCCCCCEEEeccccc----ccceecchHHHHhhhhhccCccccCCCCCccHHHHHHHHHHH
Confidence 99999999999 7999999999999999999974 45666666654322 1 2247899999999999999999
Q ss_pred HhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCce-eeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccC
Q 011777 366 RVIDKERRQAHCADVGSHLLGRLRTLQERHDIIG-DVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGG 444 (477)
Q Consensus 366 ~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~-~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~ 444 (477)
++++++++++++++++++++++|+++..+++.+. ++||.|+|+++++.+ ......+.+.|+++||++.+.+
T Consensus 340 ~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~vrg~G~~~~i~~~~--------~~~~~~~~~~l~~~Gvl~~~~~ 411 (443)
T PRK08297 340 EVIEEDGLVENAARQGEYLLARLEELAAEFPAVVSNVRGRGLMCAFDLPT--------TADRDEVIRRLWEEGVLVLPCG 411 (443)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHHHHHCCCcceeeeccceEEEEEecC--------HHHHHHHHHHHHHCCEEEecCC
Confidence 9999899999999999999999999988888665 999999999999942 2235678889999999998764
Q ss_pred CCCCEEEEeCCCCCcHHHHHHHHHHHHHHHhhC
Q 011777 445 LHGNVFRIKPPMCFTKDDADFLVDALDYSMSKL 477 (477)
Q Consensus 445 ~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~l 477 (477)
.+.+||+||+++|++|||+++++|++++.++
T Consensus 412 --~~~lr~~P~l~~t~~eid~~l~~l~~~l~~~ 442 (443)
T PRK08297 412 --ERSIRFRPALTVTTEEIDAAIDALRRALPEV 442 (443)
T ss_pred --CCeEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 4789999999999999999999999998764
No 61
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=4.5e-66 Score=520.85 Aligned_cols=368 Identities=29% Similarity=0.506 Sum_probs=315.1
Q ss_pred cCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCCCC
Q 011777 77 QKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGNLK 156 (477)
Q Consensus 77 ~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~~ 156 (477)
..|+++++++|+|+||.|||+||||.+|++++++||+||+|++|+.+|++++.+....+.++...+|+++|.+..+ .+
T Consensus 17 ~~~~~~~~~~G~~~~d~dG~~~lD~~sg~~~~~lGh~~p~v~~a~~~q~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~ 94 (395)
T PRK03715 17 RPDIVFTHGKGSWLYDHNGKRYLDFIQGWAVNCLGHCNPGMVEALAAQAEKLINPSPAFYNEPMAKLAGLLTQHSC--FD 94 (395)
T ss_pred CCCceEEeeecCEEEECCCCEEEECCcChhhccCCCCCHHHHHHHHHHHHhcccccccccCHHHHHHHHHHhhccC--CC
Confidence 3468999999999999999999999999999999999999999999999987665555567888999999998753 57
Q ss_pred EEEEeCChHHHHHHHHHHHHhcc-----CCceEEEEccCccCCcccccccccCCCCCCCCCC--CCeeeecCCCCcCCCC
Q 011777 157 VVYFVNSGTEANELAMLMARLST-----GNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQ--GEIHHVVNPDPYHGSF 229 (477)
Q Consensus 157 ~v~~~~sGseA~~~Al~~ar~~~-----~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 229 (477)
+++|++||+|||+.|+|++|.++ ++.+||.++++|||++.+++++++...++....+ .++.+++ +
T Consensus 95 ~v~f~~SGseA~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~--------~ 166 (395)
T PRK03715 95 KVFFANSGAEANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAE--------L 166 (395)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeC--------C
Confidence 89999999999999999999773 6688999999999999999998875544332211 2333322 2
Q ss_pred CCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccc
Q 011777 230 GSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFET 309 (477)
Q Consensus 230 ~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~ 309 (477)
++ ++++++++. +++++||+||+++++|+++|+++|+++|+++|++||+++|+||||+||||+| ++|++++
T Consensus 167 ~d-----~~~l~~~l~----~~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG-~~~a~~~ 236 (395)
T PRK03715 167 ND-----IASVEKLIT----DKTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTG-TLFAYEL 236 (395)
T ss_pred ch-----HHHHHHHcC----CCceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCc-chhhHhh
Confidence 21 467777775 4789999999999999999999999999999999999999999999999999 7899999
Q ss_pred cCCCcceeeecccccCccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHH
Q 011777 310 QGVIPDIVTMAKGIGNGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLR 389 (477)
Q Consensus 310 ~gv~pDivt~sK~lg~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~ 389 (477)
+++.||++|+||++++|+|+|++++++++.. +....+++||++||+++++++++|++++++++.+++++++++++++|+
T Consensus 237 ~gv~PDi~t~gK~lg~G~p~~av~~~~~i~~-~~~~~~~~T~~g~pl~~aaala~L~~l~~~~l~~~~~~~g~~l~~~L~ 315 (395)
T PRK03715 237 SGIEPDIMTLGKGIGGGVPLAALLAKAEVAV-FEAGDQGGTYNGNPLMTAVGVAVISQLLAPGFLEGVRARGEYLKEKLL 315 (395)
T ss_pred cCCCCceeeehhhhhCCcceEEEEEcccccc-ccCCCcCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999863 444457899999999999999999999988999999999999999999
Q ss_pred HHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHc---CceeeccCCCCCEEEEeCCCCCcHHHHHHH
Q 011777 390 TLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLREL---GVLVGKGGLHGNVFRIKPPMCFTKDDADFL 466 (477)
Q Consensus 390 ~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~---Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~ 466 (477)
++..+++ +.++||.|+|+++++..+ ....+.+.+.+. ||++.+.. .+.+||+||+.+|++||+++
T Consensus 316 ~l~~~~~-i~~vrG~Glm~~i~l~~~---------~~~~~~~~~~~~~~~Gi~~~~~~--~~~lR~~p~l~~t~~ei~~~ 383 (395)
T PRK03715 316 ELSEERG-LEGERGEGLLRALLLGKD---------IGPQIVEKARDMQPDGLLLNAPR--PNLLRFMPALNVTTEEIDQM 383 (395)
T ss_pred HHhhcCC-cCeEEcceeEEEEEecCc---------hHHHHHHHHHhccCCCEEEeecC--CCEEEEeCCcccCHHHHHHH
Confidence 9988777 677999999999999532 123444445555 99987543 58999999999999999999
Q ss_pred HHHHHHHHhhC
Q 011777 467 VDALDYSMSKL 477 (477)
Q Consensus 467 l~~l~~~l~~l 477 (477)
+++|+++++++
T Consensus 384 ~~~l~~~l~~~ 394 (395)
T PRK03715 384 IAMLRSVLDKL 394 (395)
T ss_pred HHHHHHHHHhh
Confidence 99999998753
No 62
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=3.4e-65 Score=517.39 Aligned_cols=405 Identities=22% Similarity=0.290 Sum_probs=328.7
Q ss_pred CCHHHHHHHHhhhcCCCcc---ccc----cCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhh
Q 011777 55 PSADQVFQKRKQFLGPSIF---HYY----QKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKL 127 (477)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~---~~~----~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~ 127 (477)
|++.+++++.+++++.+.. ..+ ..|+++++|+|+||||.|||+||||.+|++++++||+||+|++|+.+|+++
T Consensus 5 ~~s~~l~~~a~~~~p~g~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~yiD~~~g~~~~~lGh~~p~v~~ai~~q~~~ 84 (433)
T PRK00615 5 QEMTHTFSEACQYFPGGVNSPVRACRSVGITPPIVSSASGDIFIDSLGKTFIDFCGSWGSLIHGHSHPKICDAIQQGAER 84 (433)
T ss_pred HHHHHHHHHHHhhCCCCcCCCcccccccCCCCceEEEeeeCEEEECCCCEEEEcccchhccccCCCCHHHHHHHHHHHHh
Confidence 5678999999999975432 122 468999999999999999999999999999999999999999999999998
Q ss_pred ccccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCc---ccccccccC
Q 011777 128 LQHATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGS---SGTIGLTAL 204 (477)
Q Consensus 128 ~~~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~---~~~~~~~~~ 204 (477)
+.. ..+.++...+|+++|.+.+|...++|+|++||+||++.|+|+||.+|||.+||.++++|||++ .++++.++.
T Consensus 85 ~~~--~~~~~~~~~~la~~L~~~~~~~~~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~ 162 (433)
T PRK00615 85 GTS--YGLTSEQEILFAEELFSYLGLEDHKIRFVSSGTEATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSET 162 (433)
T ss_pred CCC--CCCCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCC
Confidence 643 235678899999999999986567999999999999999999999999999999999999998 444444432
Q ss_pred CCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHh
Q 011777 205 NTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKA 284 (477)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~ 284 (477)
........ .+ ...+.+.....++++ .++++++++.. .+++++||+||+++++|.++|+++||++|+++|++|
T Consensus 163 ~~~~~~~~-~~-~~~~~~~~~~~~~~d-----~~~l~~~l~~~-~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~ 234 (433)
T PRK00615 163 SLDTLTHL-VD-TDLAHPLTLSLPYND-----FQIFQTVMNSL-GHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRT 234 (433)
T ss_pred CcCcCCCC-CC-CCCCCCCeEeCCCCC-----HHHHHHHHHhc-CCceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHc
Confidence 11110000 00 000001111123332 47788888633 367999999999999999999999999999999999
Q ss_pred CcEEEEcCcccCccCCCCCCccccccCCCcceeeecccccCccceEEEEeCHHHHHhhccc---ccccCCCCcHHHHHHH
Q 011777 285 GGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIGNGLPLGAVVTTPEIANVMAQK---IQFNTFGGNPVCSAGG 361 (477)
Q Consensus 285 gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pig~v~~~~~~~~~~~~~---~~~~t~~~~~~~~aaa 361 (477)
|+++|+||||+|| |+| .+++++++++.||++||||++|||+|+|++++++++++.+... .+++||++||++|+|+
T Consensus 235 g~llI~DEv~tG~-R~G-~~ga~~~~gv~PDi~~~gK~lggG~p~~av~~~~~i~~~~~~~~~~~~~~T~~g~p~~~aa~ 312 (433)
T PRK00615 235 GSLSIMDEVVTGF-RVA-QGGAAAIYHVKPDITVYGKILGGGLPAAAVVAHKSIMDHLAPEGTIFQAGTLSGNPLAMAAG 312 (433)
T ss_pred CCEEEEEcccccc-ccc-HhHHHHhcCCCCCeEEEcccccCCcceeeeeecHHHHhhhcCCCCcccCCCCcccHHHHHHH
Confidence 9999999999999 899 6888899999999999999999999999999999999988532 3678999999999999
Q ss_pred HHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCC-ceeeeccceeEEEEEeeCCCC--C---CccHHHHHHHHHHHHH
Q 011777 362 LAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDI-IGDVRGRGLMVGMELVTDRKE--K---TPAKAETAVLFEKLRE 435 (477)
Q Consensus 362 ~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~-~~~v~g~g~~~~i~~~~~~~~--~---~~~~~~~~~~~~~l~~ 435 (477)
+++|++++++++++++++++++++++|+++..+++. +..++ .|+|+++++..+..+ + ..+......+.+.|.+
T Consensus 313 la~L~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~g~~v~~~r-~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 391 (433)
T PRK00615 313 KASINLCREQGFYTQLSTLEQNFLSPIEEMIRSQGFPVSLVR-YGSMFSFFFNENRPNNLAEAQLSDIEAFQTFYQSAFS 391 (433)
T ss_pred HHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEe-eceEEEEEEeCCCCCChHHHhhCCHHHHHHHHHHHHH
Confidence 999999988889999999999999999998777443 66677 899999999754321 0 1123345678999999
Q ss_pred cCceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 436 LGVLVGKGGLHGNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 436 ~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
+||++.+...... ..+..||++|||++++++++++++
T Consensus 392 ~Gv~~~~~~~~~~----~ls~~ht~~did~~~~a~~~~~~~ 428 (433)
T PRK00615 392 KGVYLSPSPFEAS----FLSSAHSMENLDYAQNVLIDSLEK 428 (433)
T ss_pred CCeeecCcccccc----ceecCCCHHHHHHHHHHHHHHHHH
Confidence 9999987532222 346889999999999999999875
No 63
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=6.3e-66 Score=487.67 Aligned_cols=378 Identities=31% Similarity=0.493 Sum_probs=319.4
Q ss_pred cccCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCC-C
Q 011777 75 YYQKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMP-G 153 (477)
Q Consensus 75 ~~~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~-~ 153 (477)
+.+.|+++.+++|+++||.||++||||++++++..+||+||+|.+|+.+|+.++.|+...+......+++++|.+... .
T Consensus 35 ~a~~pv~~~~gkg~kl~D~~g~EyiD~~ssw~~~~~Ghanpev~ral~~q~~k~~hs~~~~~t~eav~l~~~l~~~~~~~ 114 (433)
T KOG1401|consen 35 YARYPVVIESGKGSKLFDPDGKEYIDFTSSWAVTILGHANPEVARALAEQAKKLGHSSNGYFTLEAVELEEVLSAVLGKG 114 (433)
T ss_pred cCCCceeeecceeeeeecCCcceeeeeccceeccccCCCCHHHHHHHHHHHhhheeccCccccHHHHHHHHHHHhcccCC
Confidence 346689999999999999999999999999999999999999999999999999998877766668899999998873 3
Q ss_pred CCCEEEEeCChHHHHHHHHHHHHhccCCce------EEEEccCccCCcccccccccCCCCCCCCCC--CCeeeecCCCCc
Q 011777 154 NLKVVYFVNSGTEANELAMLMARLSTGNLG------MIALRNAYHGGSSGTIGLTALNTWKYPIPQ--GEIHHVVNPDPY 225 (477)
Q Consensus 154 ~~~~v~~~~sGseA~~~Al~~ar~~~~~~~------ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 225 (477)
..++|+|+||||||||.|||+||+.+..+. +|.|+++|||.+.++++.++.+.|+.+..+ +++...
T Consensus 115 ~~~rvff~nsGTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~------ 188 (433)
T KOG1401|consen 115 SAERVFFCNSGTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTA------ 188 (433)
T ss_pred CccEEEEecCCcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeec------
Confidence 468999999999999999999999875544 999999999999999999988777665433 333333
Q ss_pred CCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCc
Q 011777 226 HGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYW 305 (477)
Q Consensus 226 ~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~ 305 (477)
.+++ ..+++++++. ++++++|||+||+||+||.++++++||..|+++|+++|+++|+|||||||||+| ..|
T Consensus 189 --~ynd-----~t~l~k~~~~-h~~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g-~~~ 259 (433)
T KOG1401|consen 189 --EYND-----STALEKLFES-HKGEIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLG-YGW 259 (433)
T ss_pred --ccCC-----HHHHHHHHHh-CCCceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccc-hHH
Confidence 2232 4788888873 456899999999999999999999999999999999999999999999999999 899
Q ss_pred cccccCCCcceeeecccccCccceEEEEeCHHHHHhhccccc---ccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHH
Q 011777 306 GFETQGVIPDIVTMAKGIGNGLPLGAVVTTPEIANVMAQKIQ---FNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGS 382 (477)
Q Consensus 306 ~~~~~gv~pDivt~sK~lg~G~pig~v~~~~~~~~~~~~~~~---~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~ 382 (477)
++++++++|||.|++|.++||+|+|++++++++++.+....+ ++||++||++|.++..+|+.+.+.++++++.+.++
T Consensus 260 a~e~~~~~PDI~t~aK~L~gGlPigA~~v~~kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l~~~e~~k~vs~~~k 339 (433)
T KOG1401|consen 260 AQEYFGVTPDITTVAKPLGGGLPIGATGVRDKVAEMISPGDHLYHGGTFSGNPLACSAGIKVLDELKDPETLKNVSKIGK 339 (433)
T ss_pred HHHHhCcCCcceeehhhccCCceeEEEeehHHHHhhcCCCCccccCcccCCChhhhhHHHHHHHHHcCHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999987655 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCceee-eccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCC--CCCEEEEeC--CCC
Q 011777 383 HLLGRLRTLQERHDIIGDV-RGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGL--HGNVFRIKP--PMC 457 (477)
Q Consensus 383 ~l~~~L~~l~~~~~~~~~v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~--~~~~iRi~p--~~~ 457 (477)
.|+++|.+...+++..... +++|+++++++..+. ..+.+...++|.++.+.+. ....+||.| .++
T Consensus 340 ~L~~~l~e~~~~~~~~i~g~~grgl~ig~~~~~p~----------~~~~d~~~~~~ll~~~~~~~~~~~gv~i~P~~~l~ 409 (433)
T KOG1401|consen 340 ELRKLLDEYLKKTPNSICGGVGRGLVIGFEFEGPV----------YKFADAAREQGLLILTLGKGLLEEGVRIAPIYLLT 409 (433)
T ss_pred HHHHHHHHHhccCCCceeeeeeeEEEEEEEEeech----------hhhhhhhhhhhHHHHHHhcccccceEEEecccccc
Confidence 9999999988887644333 889999999986532 2233333344444433221 113467777 444
Q ss_pred C--cHHHHHHHHHHHHHHHhhC
Q 011777 458 F--TKDDADFLVDALDYSMSKL 477 (477)
Q Consensus 458 ~--t~e~i~~~l~~l~~~l~~l 477 (477)
+ ++|.++++++++++.++++
T Consensus 410 ~~~~~E~i~~~l~i~~~~l~~~ 431 (433)
T KOG1401|consen 410 VEHTPEVIQRLLTILEKVLSAL 431 (433)
T ss_pred ccCcHHHHHHHHHHHHHHHHHh
Confidence 4 4899999999999988753
No 64
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=100.00 E-value=3.1e-65 Score=518.74 Aligned_cols=372 Identities=29% Similarity=0.494 Sum_probs=324.9
Q ss_pred cCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCCCC
Q 011777 77 QKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGNLK 156 (477)
Q Consensus 77 ~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~~ 156 (477)
+.|+.+++|+|+||||.|||+||||.+|+++++|||+||+|++|+.+|++++.+....+.++...+|+++|++..+ .+
T Consensus 20 ~~~~~~~~~~G~~~~d~dG~~~lD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~ 97 (406)
T PRK12381 20 PAPFIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPALREALNEQASKFWHTGNGYTNEPVLRLAKKLIDATF--AD 97 (406)
T ss_pred CCCceEEEeecCEEEeCCCCEEEEcCcCHhhccCCCCCHHHHHHHHHHHhhcccccCccCCHHHHHHHHHHHhhCC--CC
Confidence 4578999999999999999999999999999999999999999999999986554445667888999999999874 47
Q ss_pred EEEEeCChHHHHHHHHHHHHhcc------CCceEEEEccCccCCcccccccccCCCCCCCCCC--CCeeeecCCCCcCCC
Q 011777 157 VVYFVNSGTEANELAMLMARLST------GNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQ--GEIHHVVNPDPYHGS 228 (477)
Q Consensus 157 ~v~~~~sGseA~~~Al~~ar~~~------~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 228 (477)
+++|++||+|||+.|+|+||.++ ++.+|+.++++|||++.+++++++.+.++....+ .++.+++
T Consensus 98 ~v~~~~sGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 169 (406)
T PRK12381 98 RVFFCNSGAEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAA-------- 169 (406)
T ss_pred eEEEcCCcHHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeC--------
Confidence 99999999999999999999885 7889999999999999999888876544432211 2333332
Q ss_pred CCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCcccc
Q 011777 229 FGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFE 308 (477)
Q Consensus 229 ~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~ 308 (477)
+++ ++++++++. +++++||+||+++++|+++++++|+++|+++|++||++||+||||+||||+| .+|+++
T Consensus 170 ~~d-----~~~l~~~l~----~~~aaviiEPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G-~~~~~~ 239 (406)
T PRK12381 170 YND-----LNSASALID----DQTCAVIVEPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTG-ELYAYM 239 (406)
T ss_pred CCC-----HHHHHHhcc----CCeeEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCc-chhhhH
Confidence 222 477887775 4799999999999999999999999999999999999999999999999999 678888
Q ss_pred ccCCCcceeeecccccCccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHH
Q 011777 309 TQGVIPDIVTMAKGIGNGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRL 388 (477)
Q Consensus 309 ~~gv~pDivt~sK~lg~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L 388 (477)
++++.||++||||++++|+|+|++++++++++.+....+.+||++||+++++++++|+.++++++.+++++++++++++|
T Consensus 240 ~~~v~pDi~t~sK~l~gG~~ig~~~~~~~~~~~~~~~~~~~t~~~~pl~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L 319 (406)
T PRK12381 240 HYGVTPDVLTTAKALGGGFPIGAMLTTEKCASVMTVGTHGTTYGGNPLASAVAGKVLELINTPEMLNGVKQRHDWFVERL 319 (406)
T ss_pred hhCCCCCEEEehhhhhCCCceEEEEEcHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999988777889999999999999999999988889999999999999999
Q ss_pred HHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHHHHH
Q 011777 389 RTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADFLVD 468 (477)
Q Consensus 389 ~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~ 468 (477)
+++..+++.+.++++.|+|+++++..+ .......+.+.|+++||++.+.+ .+++||+||+++|+++|+++++
T Consensus 320 ~~l~~~~~~~~~vrg~Gl~~~~~l~~~------~~~~~~~~~~~l~~~Gv~v~~~g--~~~lRl~p~~~~t~~~i~~~~~ 391 (406)
T PRK12381 320 NTINARYGLFSEIRGLGLLIGCVLNAE------YAGKAKQISQEAAKAGVMVLIAG--PNVVRFAPALNISEEEITTGLD 391 (406)
T ss_pred HHHHhhCCCEEEEecCeEEEEEEecCc------hhhHHHHHHHHHHHCCcEEeeCC--CCEEEEeCCccCCHHHHHHHHH
Confidence 999777888889999999999998532 11235678899999999997654 4799999999999999999999
Q ss_pred HHHHHHhh
Q 011777 469 ALDYSMSK 476 (477)
Q Consensus 469 ~l~~~l~~ 476 (477)
+|++++++
T Consensus 392 ~l~~~l~~ 399 (406)
T PRK12381 392 RFARACER 399 (406)
T ss_pred HHHHHHHH
Confidence 99998864
No 65
>PLN02624 ornithine-delta-aminotransferase
Probab=100.00 E-value=2.9e-64 Score=518.36 Aligned_cols=395 Identities=28% Similarity=0.466 Sum_probs=337.2
Q ss_pred CHHHHHHHHhhhcCCCccccccCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhcccccccc
Q 011777 56 SADQVFQKRKQFLGPSIFHYYQKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIY 135 (477)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~ 135 (477)
.++++++...++..+. +++.|+++++++|+|+||.||++||||++|++++++||+||+|++|+++|++++.+....+
T Consensus 38 ~~~~~~~~~~~~~~~~---~~~~p~~~~~a~G~~l~d~dG~~ylD~~sg~~~~~~Gh~~p~v~~ai~~ql~~~~~~~~~~ 114 (474)
T PLN02624 38 SSAHLIELEEKYSAHN---YHPIPVVFSRAKGSRIWDPEGKKYLDFLSAYSAVNQGHCHPKIIKALTEQAEKLTLSSRAF 114 (474)
T ss_pred chHHHHHHHHHhhccc---cCCCCceEEeeeeCEEEECCCCEEEEcccchhcccCCCCCHHHHHHHHHHHHhcCCccccc
Confidence 3467888777775543 3356899999999999999999999999999999999999999999999999977655556
Q ss_pred CChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhcc--------CCceEEEEccCccCCcccccccccCCCC
Q 011777 136 LHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLST--------GNLGMIALRNAYHGGSSGTIGLTALNTW 207 (477)
Q Consensus 136 ~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~--------~~~~ii~~~~~yhG~~~~~~~~~~~~~~ 207 (477)
.++...+|+++|+++++ .++++|+|||+|||+.|||+||.++ ++..||.+.++|||++.+++++++.+.+
T Consensus 115 ~~~~~~~la~~L~~~~~--~~~~~f~~SGseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~ 192 (474)
T PLN02624 115 YNDKFPEFAEYLTSMFG--YDMVLPMNTGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEA 192 (474)
T ss_pred CCHHHHHHHHHHHhhcC--CCeEEEeCChHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccc
Confidence 78889999999999984 5799999999999999999999863 3457999999999999999998875544
Q ss_pred CCCCC--CCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhC
Q 011777 208 KYPIP--QGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAG 285 (477)
Q Consensus 208 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~g 285 (477)
+..+. .+++.++++ ++ .+.++++++. +.+++++||+||+++++|.+.++++||++|+++|++||
T Consensus 193 ~~~~~~~~~~~~~~~~--------~d-----~~~l~~~l~~-~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~g 258 (474)
T PLN02624 193 TRGFGPLLPGHLKVDF--------GD-----LDALEKIFEE-DGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHN 258 (474)
T ss_pred cccCCCCCCCceEeCC--------CC-----HHHHHHHHHh-CCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 33221 134444432 21 4778888863 34689999999999999999999999999999999999
Q ss_pred cEEEEcCcccCccCCCCCCccccccCCCcceeeecccccCc-cceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHH
Q 011777 286 GVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIGNG-LPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAV 364 (477)
Q Consensus 286 illI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg~G-~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~ 364 (477)
+++|+||||+||||+| .+|+++++++.||++++||++++| +|+|++++++++++.+....+++||++||++++++.++
T Consensus 259 illI~DEv~tG~GrtG-~~~a~~~~~i~pDiv~lsK~lggG~~pigav~~~~~i~~~~~~~~~~~T~~g~pl~~aaa~aa 337 (474)
T PLN02624 259 VLMIADEIQTGLARTG-KMLACDWEEVRPDVVILGKALGGGVIPVSAVLADKDVMLCIKPGEHGSTFGGNPLASAVAMAA 337 (474)
T ss_pred CEEEEeccccCcCcCc-chhhHHhcCCCCCEEEecccccCCCCcceeeeecHHHHhHhccCCcCCCCCCCHHHHHHHHHH
Confidence 9999999999999999 788888899999999999999987 89999999999998887777889999999999999999
Q ss_pred HHhhchhhHHHHHHHHHHHHHHHHHHHHHhCC-CceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeecc
Q 011777 365 LRVIDKERRQAHCADVGSHLLGRLRTLQERHD-IIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKG 443 (477)
Q Consensus 365 l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~-~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~ 443 (477)
|+.++++++.+++.+++++++++|.++..+++ .+.++++.|+|+++++..+. .......++.+.|+++||++.++
T Consensus 338 Le~l~~~~l~~~~~~~~~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~l~~~~----~~~~~a~~~~~~L~e~GV~v~p~ 413 (474)
T PLN02624 338 LQVVQDEKLAERSAKLGQELRDQLQKIQKQFPKLIKEVRGRGLLNAVVLNSPK----LGPVSAYDVCLKLKERGLLAKPT 413 (474)
T ss_pred HHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEeeEEEEEEEecCCC----cChHHHHHHHHHHHhCCeEEecC
Confidence 99998888999999999999999999988887 47789999999999884321 11234567888899999999886
Q ss_pred CCCCCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 444 GLHGNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 444 ~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
+ ++++||+||+.+|++||++++++|++++.+
T Consensus 414 ~--~~~lR~~p~l~~t~e~id~~l~~L~~~l~~ 444 (474)
T PLN02624 414 H--DTIIRLAPPLSISEDELQECSKALSDVLEH 444 (474)
T ss_pred C--CCEEEEECCccCCHHHHHHHHHHHHHHHHH
Confidence 4 689999999999999999999999988753
No 66
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=100.00 E-value=2.2e-64 Score=538.54 Aligned_cols=415 Identities=20% Similarity=0.240 Sum_probs=332.0
Q ss_pred CCHHHHHHHHhhhcCCCcccc--c--cCceeEEeeecc----EEEeCCCC----EEEeecCCcccccCC-CCCHHHHHHH
Q 011777 55 PSADQVFQKRKQFLGPSIFHY--Y--QKPLNIVEGKMQ----YLFDENGR----RYLDAFAGIVTVSCG-HCHPDVLNAI 121 (477)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~--~--~~p~~~~~g~G~----~~~d~dG~----~ylD~~~g~~~~~lG-h~~p~v~~Av 121 (477)
++++++.++..++++.....+ + ..|.+|++++|. |++|.||+ +|||+.+++|++++| |+||+|++|+
T Consensus 312 ~~~~~~~~~a~~~iw~Pftq~~~~~~~~~~vi~~a~G~~~~~~~~d~~G~~~~~~ylD~~sg~w~~~lG~h~~p~I~~Ai 391 (817)
T PLN02974 312 QRLQSMPKEAGEVLWWPFTQHALVPRDSVTVIDSRCGEDFSVYKPKTNSTCSIVQQFDACASWWTQGPDPTLQPELARAV 391 (817)
T ss_pred HHHHHHHHHHhhhccCCcccccccCCCCceEEEeeecCceeEEEECCCCCcccceEEEcchhHHHhCCCcCCCHHHHHHH
Confidence 345566777777775433221 1 246889999998 99999998 999999999999999 6899999999
Q ss_pred HHHHhhcccccc-ccCChHHHHHHHHHHhhCCCC-CCEEEEeCChHHHHHHHHHHHHh-cc------------------C
Q 011777 122 FEQSKLLQHATT-IYLHHAIADFAEALASKMPGN-LKVVYFVNSGTEANELAMLMARL-ST------------------G 180 (477)
Q Consensus 122 ~~~l~~~~~~~~-~~~~~~~~~l~~~La~~~~~~-~~~v~~~~sGseA~~~Al~~ar~-~~------------------~ 180 (477)
.+|+.++.|... .+.++...+|+++|.+..+.+ +++|+|++|||||||.|||+|+. ++ +
T Consensus 392 ~~Qa~rl~hv~~~~~~hepa~~LAe~L~~~~~~~~l~rVffs~sGSeAvE~AlKmA~r~y~~~~G~~~~~~~~~~~~~~~ 471 (817)
T PLN02974 392 AYAAGRYGHVMFPENVHEPALRAAELLLGGPGKGWASRVFFSDNGSTAIEVALKMAFRKFIVDHGFLENSGNEKRGGDLI 471 (817)
T ss_pred HHHHhhCCccccCccCCHHHHHHHHHHHhccCCCCCCEEEECCchHHHHHHHHHHHHHHHHHhcCCCcccccccccccCC
Confidence 999999887654 357899999999999965423 68999999999999999999953 52 3
Q ss_pred CceEEEEccCccCCcccccccccCCCCCCCC--C--CCCeeee--------------cCCCCcCCCC-------CC----
Q 011777 181 NLGMIALRNAYHGGSSGTIGLTALNTWKYPI--P--QGEIHHV--------------VNPDPYHGSF-------GS---- 231 (477)
Q Consensus 181 ~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~--~--~~~~~~~--------------~~~~~~~~~~-------~~---- 231 (477)
|.+||.++++|||.|.+++++++.+.+...+ + .+...++ ++|..+++.. .+
T Consensus 472 r~kIIa~~gsYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 551 (817)
T PLN02974 472 ELKVLALDGSYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMRNGRWNISLPEGFSSGLEGEETTWESRDEV 551 (817)
T ss_pred CCEEEEECCCcCCCCHHHHhhCCchhhhcccccccccCCCcccCCCccccccccccccCCcccccccccccccccccccc
Confidence 7789999999999999999998754332211 1 1111222 2222222211 00
Q ss_pred -----C----HHHHHHHHHHHHhc----cCCCCeeEEEeccc-CCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCc
Q 011777 232 -----D----AARYAQDLQDHIDF----GTSGKVAGFIAETI-QGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGF 297 (477)
Q Consensus 232 -----~----~~~~~~~le~~i~~----~~~~~~a~vi~epi-~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gf 297 (477)
+ ...|.+.+++.|+. ..++++++||+||+ ||.||+++++++|+++|+++|++||++||+|||+|||
T Consensus 552 f~~~r~~~~~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGf 631 (817)
T PLN02974 552 FDKTRDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGL 631 (817)
T ss_pred ccccccchhhhHHHHHHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCC
Confidence 0 12345677777763 23578999999995 8999999999999999999999999999999999999
Q ss_pred cCCCCCCccccccCCCcceeeecccccCc-cceEEEEeCHHHHHhhcc------cccccCCCCcHHHHHHHHHHHHhhch
Q 011777 298 GRTGSHYWGFETQGVIPDIVTMAKGIGNG-LPLGAVVTTPEIANVMAQ------KIQFNTFGGNPVCSAGGLAVLRVIDK 370 (477)
Q Consensus 298 gr~G~~~~~~~~~gv~pDivt~sK~lg~G-~pig~v~~~~~~~~~~~~------~~~~~t~~~~~~~~aaa~a~l~~l~~ 370 (477)
||+| ++|+++++|+.|||+|++|+++|| +|+|++++++++++.+.. ..|++||++||++|+|++++|+++++
T Consensus 632 GRtG-~~fa~e~~gv~PDIi~~gKgLtgG~~Plaa~l~~~~I~~~f~~~~~~~~~~hg~Ty~gnpl~cAaala~L~~~~~ 710 (817)
T PLN02974 632 WRLG-VESAWELLGCKPDIACYAKLLTGGLVPLAATLATEEVFEAFRGPSKLDALLHGHSYTAHPMGCAAAAKALQWYKD 710 (817)
T ss_pred Cccc-chhhHHhcCCCCCEEeecccccCCCCccEEEEEcHHHHHhhccccccCCcccCCCCCcCHHHHHHHHHHHHHHHc
Confidence 9999 899999999999999999999999 699999999999998852 24889999999999999999999988
Q ss_pred hh----HHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCcc-HHHHHHHHHHHH-HcCceeeccC
Q 011777 371 ER----RQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPA-KAETAVLFEKLR-ELGVLVGKGG 444 (477)
Q Consensus 371 ~~----~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~-~~~~~~~~~~l~-~~Gv~v~~~~ 444 (477)
++ +.++..++++++.++|.+...+++.+.++|+.|+|++++++++... .+. ......+.+.++ ++||++++.
T Consensus 711 ~~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~VRg~Gl~~~iel~~~~~~-~~~~~~~a~~v~~~~~~~~Gl~~r~~- 788 (817)
T PLN02974 711 PSTNPNLIPPGSRLRELWDEELVRAISSLPNVERVVSLGTVLALELDAEGSG-SGYSSLYARSVVRRLRREDGIYARPL- 788 (817)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEeeeeEEEEEEecCCcc-cccchHHHHHHHHHHHHhCCEEEEec-
Confidence 74 4455555666677777444456899999999999999999865432 222 233567888888 999999875
Q ss_pred CCCCEEEEeCCCCCcHHHHHHHHHHHHHHH
Q 011777 445 LHGNVFRIKPPMCFTKDDADFLVDALDYSM 474 (477)
Q Consensus 445 ~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l 474 (477)
+|+|++.||+.++++++++++++|++.+
T Consensus 789 --Gnvi~l~pP~~i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 789 --GNVVYLMCGPTTSPETCTRLLRKVYRRL 816 (817)
T ss_pred --CCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 5899999999999999999999999876
No 67
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=100.00 E-value=3.1e-64 Score=513.09 Aligned_cols=394 Identities=27% Similarity=0.426 Sum_probs=316.0
Q ss_pred HHHHHhhhcCCCccccccCceeEEeeeccEEEeC-CCCEEEeecCCcccccCCCCCHHHH--HHHHHHHhhccc---ccc
Q 011777 60 VFQKRKQFLGPSIFHYYQKPLNIVEGKMQYLFDE-NGRRYLDAFAGIVTVSCGHCHPDVL--NAIFEQSKLLQH---ATT 133 (477)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~~~d~-dG~~ylD~~~g~~~~~lGh~~p~v~--~Av~~~l~~~~~---~~~ 133 (477)
+++...+|.... .++.++.+++|+|+||||. |||+||||.+|++++++||+||+|+ +|+.+|++++.+ ...
T Consensus 4 ~~~~~~~~~~~~---~~p~~~~~~~a~G~~l~D~~dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~q~~~~~~~~~~~~ 80 (431)
T TIGR03251 4 VHEVLSRHMLTD---GFDLVLDLDRSRGSVLVDARDGRRYLDMFSFFASMALGMNHPALVDDLAFRARLGAAAVNKPSNS 80 (431)
T ss_pred HHHHHHHHhhcc---CCceeeEEEeccCCEEEECCCCCChhhcccChhhcCCCCCChhhhHHHHHHHHHHHhhhcccccC
Confidence 455555555322 1222344699999999996 9999999999999999999999999 999999998643 222
Q ss_pred ccCChHHHHHHHHHHhhC-CCCCCEEEEeCChHHHHHHHHHHHHhccC------------CceEEEEccCccCCcccccc
Q 011777 134 IYLHHAIADFAEALASKM-PGNLKVVYFVNSGTEANELAMLMARLSTG------------NLGMIALRNAYHGGSSGTIG 200 (477)
Q Consensus 134 ~~~~~~~~~l~~~La~~~-~~~~~~v~~~~sGseA~~~Al~~ar~~~~------------~~~ii~~~~~yhG~~~~~~~ 200 (477)
.+.++...+++++|++.. +.++++++|+||||||||+|+|+||.|++ |.+||.|+++|||++.++++
T Consensus 81 ~~~~~~~~~l~~~l~~~~~~~~~~~v~f~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als 160 (431)
T TIGR03251 81 DVYTVAMARFVDTFARVLGDPALPHLFFIEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLS 160 (431)
T ss_pred CCCCHHHHHHHHHHHHhcCCCCcCEEEEeCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhh
Confidence 356788889999999986 55678999999999999999999998863 46899999999999999999
Q ss_pred cccCCCCCCC-CCCCCeeeecCCCCcCCCCCC---C-----HHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCc
Q 011777 201 LTALNTWKYP-IPQGEIHHVVNPDPYHGSFGS---D-----AARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAP 271 (477)
Q Consensus 201 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---~-----~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~ 271 (477)
+++...++.. .+..+..+++.|.. +++++. + ...+++++++++.. +++++++||+||+++++|++++++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~iAavivEPv~g~~G~~~~~~ 238 (431)
T TIGR03251 161 LTNTDPRKTARFPKFDWPRIDNPKL-TFPLDAPNLDQVIALEEEALRQARAAFAE-RPHDIACFIAEPIQGEGGDNHFRP 238 (431)
T ss_pred ccCCccccccCCCCCCCccCCCCcc-cCCccccccchhhHHHHHHHHHHHHHHHh-CCCcEEEEEEeccccCCCCcCCCH
Confidence 8875433221 11112222333322 122211 1 12346667777763 457899999999999999999999
Q ss_pred hhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCcceeeecccccCccceEEEEeCHHHHHhh----c-ccc
Q 011777 272 GYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIGNGLPLGAVVTTPEIANVM----A-QKI 346 (477)
Q Consensus 272 ~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pig~v~~~~~~~~~~----~-~~~ 346 (477)
+||++|+++|++||++||+||||+||||+| .+|+++++|+.||++++||++ |+++++..+++.+.. . ...
T Consensus 239 ~~l~~l~~lc~~~g~llI~DEV~tG~GrtG-~~~a~~~~gv~PDi~~~gK~~----~~~g~~~~~~i~~~~~~~~~~~~~ 313 (431)
T TIGR03251 239 EFLRAMRALCDEHDALLIFDEVQTGVGLTG-TAWAYQQLGVQPDIVAFGKKT----QVCGIMAGRRVDEVADNVFAVPSR 313 (431)
T ss_pred HHHHHHHHHHHHcCCEEEEecchhccCccc-hHHHHHhcCCCCCEEEecccC----ccceEEecchHHHhhhhcccCccc
Confidence 999999999999999999999999999999 789999999999999999997 455555665543221 1 224
Q ss_pred cccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCC-CceeeeccceeEEEEEeeCCCCCCccHHH
Q 011777 347 QFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHD-IIGDVRGRGLMVGMELVTDRKEKTPAKAE 425 (477)
Q Consensus 347 ~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~-~~~~v~g~g~~~~i~~~~~~~~~~~~~~~ 425 (477)
+.+||++||+++++++++|++++++++.+++++++++++++|+++.++++ .+.+++|.|+|+++++.. ...
T Consensus 314 ~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~~~~--------~~~ 385 (431)
T TIGR03251 314 LNSTWGGNLVDMVRATRILEIIEEERLVDNARVQGAHLLARLHELAAEFPHLVSNPRGRGLMCAFDLPS--------TAD 385 (431)
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCccceecccccceeEEEEeCC--------HHH
Confidence 77899999999999999999998889999999999999999999988888 889999999999999832 223
Q ss_pred HHHHHHHHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHH
Q 011777 426 TAVLFEKLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADFLVDALDYS 473 (477)
Q Consensus 426 ~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~ 473 (477)
...+.+.|+++||++.+.+ .+.+||+||+.+|++||++++++|+++
T Consensus 386 ~~~~~~~l~~~Gvl~~~~g--~~~lr~~P~l~~t~~eid~~l~~l~~~ 431 (431)
T TIGR03251 386 RDEVIRQLYREGVLLLGCG--ERSIRFRPPLTVTREEIDAAIDAIRRV 431 (431)
T ss_pred HHHHHHHHHhCCeEEecCC--CCeEEEECCccCCHHHHHHHHHHHHhC
Confidence 5678899999999998754 478999999999999999999999863
No 68
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=100.00 E-value=5.8e-63 Score=504.74 Aligned_cols=414 Identities=30% Similarity=0.472 Sum_probs=352.4
Q ss_pred HHHHHHHHhhhcCCCccccccCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccc-c
Q 011777 57 ADQVFQKRKQFLGPSIFHYYQKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTI-Y 135 (477)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~-~ 135 (477)
.+++.++.+++.+.+... ..|+++++++|+||||+||++||||.+|++++++||+||+|.+++.+|++++.+.... +
T Consensus 4 ~~~~~~~~~~~~~~~~~~--~~p~~~~~~~G~~l~d~dG~~~lD~~~g~~~~~lGh~~~~i~~a~~~~~~~~~~~~~~~~ 81 (425)
T PRK08088 4 NKSLMQRRSAAVPRGVGQ--IHPIFADRAENCRVWDVEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQVL 81 (425)
T ss_pred HHHHHHHHHHhhccccCC--CCCceEEeeeeCEEEeCCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHhhCCCcccccc
Confidence 356777776666544322 3489999999999999999999999999999999999999999999999987654332 3
Q ss_pred CChHHHHHHHHHHhhCCCCC-CEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCC-CCCCCC--
Q 011777 136 LHHAIADFAEALASKMPGNL-KVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALN-TWKYPI-- 211 (477)
Q Consensus 136 ~~~~~~~l~~~La~~~~~~~-~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~-~~~~~~-- 211 (477)
.++...+|+++|++..+.+. ++++|++||+||++.|+|+||.++++.+||.++++|||.+.++++.++.. .+....
T Consensus 82 ~~~~~~~la~~l~~~~~~~~~~~~~f~~sGsea~e~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~ 161 (425)
T PRK08088 82 AYEPYLELCEKMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGL 161 (425)
T ss_pred CCHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCccccCCCC
Confidence 46778899999999887654 69999999999999999999999999999999999999999999887532 122222
Q ss_pred CCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhc-cCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEE
Q 011777 212 PQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDF-GTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIA 290 (477)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~-~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~ 290 (477)
...++.++++|..++. .+...++++++++++. ..++++++||+||+++++|.+.++++++++|+++|++||+++|+
T Consensus 162 ~~~~~~~~~~p~~~~~---~~~~~~~~~l~~~l~~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~ 238 (425)
T PRK08088 162 MPGHVYRALYPCPLHG---VSEDDAIASIERIFKNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIA 238 (425)
T ss_pred CCCCcEEcCCCccccC---ccHHHHHHHHHHHHHhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEE
Confidence 1245555555554431 1223346678888752 23578999999999999999999999999999999999999999
Q ss_pred cCcccCccCCCCCCccccccCCCcceeeecccccCccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhch
Q 011777 291 DEVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIGNGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDK 370 (477)
Q Consensus 291 DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~ 370 (477)
||+|+||||+| .+++++..++.||+.+|||++++|+|+||+++++++++.+....+.+|+++||+.++++.++|+.++.
T Consensus 239 Dev~~g~g~~g-~~~~~~~~~~~pdi~s~sK~l~~G~rig~v~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~ 317 (425)
T PRK08088 239 DEVQTGAGRTG-TLFAMEQMGVAADLTTFAKSIAGGFPLAGVTGRAEVMDAIAPGGLGGTYAGNPIACAAALAVLKVFEQ 317 (425)
T ss_pred eccccCCCcCc-chhHHhhcCCCCCEEEEeccccCCCcceeeEecHHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHh
Confidence 99999999999 67788888999999999999999999999999999999988777889999999999999999999988
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCCCCEE
Q 011777 371 ERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLHGNVF 450 (477)
Q Consensus 371 ~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~i 450 (477)
+++++++++.++++++.|.++..+++.+..++|.|+|+|+++..+...+.|.......+.+.|.++||++.+++.++++|
T Consensus 318 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~g~G~~~~l~l~~~~~~~~p~~~~~~~l~~~~~~~Gv~~~~~~~~~~~i 397 (425)
T PRK08088 318 ENLLQKANALGEKLKDGLLAIAEKHPEIGDVRGLGAMIAIELFEDGDHSKPNAKLTAQIVARARDKGLILLSCGPYYNVL 397 (425)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeccceEEEEEEecCCCCCCCCHHHHHHHHHHHHhCCCEEecCCCCCCEE
Confidence 89999999999999999999988888888999999999999976544445655667889999999999988766667999
Q ss_pred EEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 451 RIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 451 Ri~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
||+|++.++++||++++++|++++.+
T Consensus 398 Rl~~~~~~t~~ei~~~i~~l~~~l~~ 423 (425)
T PRK08088 398 RILVPLTIEDAQIRQGLEIIAQCFDE 423 (425)
T ss_pred EEECCCCcCHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999865
No 69
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=100.00 E-value=1.1e-63 Score=508.14 Aligned_cols=405 Identities=25% Similarity=0.362 Sum_probs=331.8
Q ss_pred CCHHHHHHHHhhhcCCCc-ccccc-CceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccc
Q 011777 55 PSADQVFQKRKQFLGPSI-FHYYQ-KPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHAT 132 (477)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~-~~~~~-~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~ 132 (477)
|+.+++++...++++... ..... .++.+++++|+|+||.|||+||||++|+++++|||+||+|++|+.+|++++.+..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~ 81 (427)
T TIGR00508 2 PDTASLLAFDQRHIWHPYTSMSSPLPVYPVESADGVELTLDDGRRLIDGMSSWWAAIHGYNHPRLNAAAQKQIDKMSHVM 81 (427)
T ss_pred CChHHHHhccccccccCccCccccCCCceEEeeeeeEEEeCCCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCcc
Confidence 344556665444443211 11112 2467899999999999999999999999999999999999999999999876443
Q ss_pred c-ccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhcc------CCceEEEEccCccCCcccccccccCC
Q 011777 133 T-IYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLST------GNLGMIALRNAYHGGSSGTIGLTALN 205 (477)
Q Consensus 133 ~-~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~------~~~~ii~~~~~yhG~~~~~~~~~~~~ 205 (477)
. .+.++...+++++|++.+|.++++++|++||+||++.|+|+||.++ +|.+||+|+++|||++.+++++++..
T Consensus 82 ~~~~~~~~~~~la~~l~~~~~~~~~~v~f~~sGseA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~ 161 (427)
T TIGR00508 82 FGGFTHKPAIELCQKLVKMTPNALDCVFLADSGSVAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPE 161 (427)
T ss_pred ccccCCHHHHHHHHHHHhhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCc
Confidence 3 3467888999999999998878899999999999999999999874 57899999999999999999887642
Q ss_pred C-CCCCCC--CCCeeeecCCCCc-CCCCCCCHHHHHHHHHHHHhccCCCCeeEEEeccc-CCCCCeeeCCchhHHHHHHH
Q 011777 206 T-WKYPIP--QGEIHHVVNPDPY-HGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETI-QGVGGAVELAPGYLKLVYDI 280 (477)
Q Consensus 206 ~-~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi-~~~~G~~~~~~~~l~~l~~l 280 (477)
. ++.... .+++..++.|... ..+++ ..+++++++++... .+++++||+||+ +++||+++++++||++|+++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~---~~~~~~l~~~l~~~-~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~l 237 (427)
T TIGR00508 162 NSMHSLYKGYLPEQIFAPAPQNRFDEEWN---EEAITPLAKLMELH-SDEIAAVILEPIVQGAGGMRFYHPTYLKRVQAL 237 (427)
T ss_pred ccccccccccCCCCeEcCCCCccccchhH---HHHHHHHHHHHHhc-CCcEEEEEEechhcCcCCcccCCHHHHHHHHHH
Confidence 1 111111 1234444444321 11111 12356777777632 467999999997 99999999999999999999
Q ss_pred HHHhCcEEEEcCcccCccCCCCCCccccccCCCcceeeecccccCc-cceEEEEeCHHHHHhhccc-----ccccCCCCc
Q 011777 281 VRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIGNG-LPLGAVVTTPEIANVMAQK-----IQFNTFGGN 354 (477)
Q Consensus 281 ~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg~G-~pig~v~~~~~~~~~~~~~-----~~~~t~~~~ 354 (477)
|++||+++|+||||+||||+| .+|+++++++.||++++||+++|| +|++++++++++++.+... .+++||++|
T Consensus 238 c~~~~~llI~DEv~tG~Gr~G-~~~~~~~~~v~pDi~~~gK~l~gG~~p~~a~~~~~~~~~~~~~~~~~~~~~~~T~~g~ 316 (427)
T TIGR00508 238 CKQYDILLIADEIATGFGRTG-KLFACEHAGVVPDILCVGKALTGGYMTLSATVTTDKVAQTISSGEAGCFMHGPTFMGN 316 (427)
T ss_pred HHHcCCEEEEeccccCCCcCC-ccchhhhcCCCCCEEEechhhhcCcccceEEEEcHHHHHHHhcCCCCccccCCCCCcC
Confidence 999999999999999999999 788899999999999999999999 5999999999999988642 377899999
Q ss_pred HHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHH
Q 011777 355 PVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLR 434 (477)
Q Consensus 355 ~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~ 434 (477)
|+++++++++|++++++++.+++++++++|+++|+++. +++.+.+++|.|+++++++..+. ....+.+.|+
T Consensus 317 p~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~-~~~~i~~vrg~G~~~~i~~~~~~--------~~~~~~~~l~ 387 (427)
T TIGR00508 317 PLACAVAEASLAILLEGEWQKQVSAIENQLKRELSPLR-KNPVVKDVRVLGAIGVVEMYKPV--------NVEELQKKFV 387 (427)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhh-cCCCEEeEeccccEEEEEECCcc--------CHHHHHHHHH
Confidence 99999999999999888999999999999999999985 46667899999999999995321 1356889999
Q ss_pred HcCceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 435 ELGVLVGKGGLHGNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 435 ~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
++||++.+. ++.+|++||+++|++|||+++++|++++++
T Consensus 388 ~~Gv~~~~~---~~~l~~~ppl~~t~~~id~~~~~l~~~l~~ 426 (427)
T TIGR00508 388 EQGVWIRPF---GKLIYVMPPYIITTEQLQKLTAALIEALHE 426 (427)
T ss_pred HCCeEEEec---CCEEEEECCCCCCHHHHHHHHHHHHHHHhc
Confidence 999999764 468999999999999999999999999864
No 70
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=100.00 E-value=1.9e-63 Score=504.89 Aligned_cols=382 Identities=27% Similarity=0.492 Sum_probs=327.2
Q ss_pred CHHHHHHHHhhhcCCCccccccCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhcccccccc
Q 011777 56 SADQVFQKRKQFLGPSIFHYYQKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIY 135 (477)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~ 135 (477)
++++++++..+++.+. +.+.|+++++|+|+||||.|||+||||.+|++++++||+||+|++|+.+|++++.+....+
T Consensus 3 ~~~~~~~~~~~~~~~~---~~~~p~~~~~~~G~~l~d~~G~~~lD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~~~ 79 (396)
T PRK04073 3 KSEKIIELTNHYGAHN---YHPLPIVISEAEGVWVKDPEGNRYMDMLSAYSAVNQGHRHPKIIQALKDQADKVTLTSRAF 79 (396)
T ss_pred hHHHHHHHHHHhcccc---cCCCCceEEeeeecEEEECCCCEEEEcCCCHHhccCCCCCHHHHHHHHHHHhhcccccccc
Confidence 4568888877775443 2356899999999999999999999999999999999999999999999999876654445
Q ss_pred CChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhc--------cCCceEEEEccCccCCcccccccccCCCC
Q 011777 136 LHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLS--------TGNLGMIALRNAYHGGSSGTIGLTALNTW 207 (477)
Q Consensus 136 ~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~--------~~~~~ii~~~~~yhG~~~~~~~~~~~~~~ 207 (477)
.++...+|+++|+++.+. ++++|++||+|||+.|||+||.+ +++++||.++++|||++.+++++++.+.+
T Consensus 80 ~~~~~~~l~~~l~~~~~~--~~~~~~~SGseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~ 157 (396)
T PRK04073 80 HSDQLGPWYEKVAKLTGK--DMVLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEY 157 (396)
T ss_pred CCHHHHHHHHHHHhcCCC--CeEEEcCChHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCccc
Confidence 678889999999998753 69999999999999999999987 57889999999999999999888765443
Q ss_pred CCCCC--CCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhC
Q 011777 208 KYPIP--QGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAG 285 (477)
Q Consensus 208 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~g 285 (477)
+.... .+++.+++. ++ ++++++.+. +++++||+||++|++|.+.++++||++|+++|++||
T Consensus 158 ~~~~~~~~~~~~~~~~--------~d-----~~~l~~~i~----~~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g 220 (396)
T PRK04073 158 KRGFGPMLPGIKKIPY--------GD-----LEALKAAIT----PNTAAFLVEPIQGEAGINIPPEGFLKAARELCKEEN 220 (396)
T ss_pred ccCCCCCCCCceEeCC--------CC-----HHHHHHhcc----cCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcC
Confidence 32221 134444432 21 477777775 468999999999999999999999999999999999
Q ss_pred cEEEEcCcccCccCCCCCCccccccCCCcceeeecccccCc-cceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHH
Q 011777 286 GVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIGNG-LPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAV 364 (477)
Q Consensus 286 illI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg~G-~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~ 364 (477)
+++|+||+|+||||+| .++++++.++.||+++|||++|+| +|+|++++++++++.+....+..||++||+++++++++
T Consensus 221 ~lli~DEv~~g~g~~g-~~~~~~~~~~~pdi~~~sK~lg~gg~~ig~~~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aa 299 (396)
T PRK04073 221 VLFIADEIQTGLGRTG-KLFACDWDNVTPDMYILGKALGGGVFPISCVAANRDILGVFTPGSHGSTFGGNPLACAVSIAA 299 (396)
T ss_pred CEEEEecchhCCCcCc-HHHHhhhcCCCCCEEEecccccCCCCcceEEEEcHHHHhhhcCCCCCCCCCCCHHHHHHHHHH
Confidence 9999999999999999 677778889999999999999975 99999999999999887767889999999999999999
Q ss_pred HHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccC
Q 011777 365 LRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGG 444 (477)
Q Consensus 365 l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~ 444 (477)
|+.++++++.++.+++++++.++|+++ .++.+..+++.|+|+++++.. ....+.+.|+++||++.+.+
T Consensus 300 L~~~~~~~l~~~~~~~~~~l~~~L~~l--~~~~i~~~~~~g~~~~~~~~~----------~~~~~~~~l~~~Gv~~~~~~ 367 (396)
T PRK04073 300 LEVLEEEKLPERSLELGEYFKEQLKEI--DNPMIKEVRGRGLFIGVELNE----------PARPYCEALKEEGLLCKETH 367 (396)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHhh--cCCcccceecceEEEEEEecc----------hHHHHHHHHHHCCeEEecCC
Confidence 999887889999999999999999886 345677889999999998742 13578888999999998653
Q ss_pred CCCCEEEEeCCCCCcHHHHHHHHHHHHHHH
Q 011777 445 LHGNVFRIKPPMCFTKDDADFLVDALDYSM 474 (477)
Q Consensus 445 ~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l 474 (477)
+++|||+||+++|++||++++++|++++
T Consensus 368 --~~~iRi~p~l~~t~e~i~~~~~~l~~~l 395 (396)
T PRK04073 368 --ETVIRFAPPLVITKEELDWAFEKIKAVL 395 (396)
T ss_pred --CCEEEEECCcccCHHHHHHHHHHHHHHh
Confidence 5799999999999999999999999876
No 71
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=100.00 E-value=4.3e-65 Score=503.90 Aligned_cols=329 Identities=39% Similarity=0.637 Sum_probs=288.6
Q ss_pred eEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccc-cccCChHHHHHHHHHHhhCCCCCCEEE
Q 011777 81 NIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHAT-TIYLHHAIADFAEALASKMPGNLKVVY 159 (477)
Q Consensus 81 ~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~-~~~~~~~~~~l~~~La~~~~~~~~~v~ 159 (477)
++++++|+||||.|||+||||.++++++++||+||+|.+++.+|++++.+.. ..+.++...+|+++|.+.+|...++|+
T Consensus 1 ~i~~a~G~~l~d~dG~~~lD~~~~~~~~~lGh~~p~i~~ai~~~~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~ 80 (339)
T PF00202_consen 1 FIERAEGAYLWDVDGREYLDFMSGYGSVNLGHNHPEIAEAIAEQANKLNYVSFSGFTHPEAAELAEKLAELFPGGLDRVF 80 (339)
T ss_dssp EEEEEEBTEEEETTSEEEEESSHHHHTTTT-BT-HHHHHHHHHHHHHCSSCSTTTSEEHHHHHHHHHHHHHSSTTEEEEE
T ss_pred CeEEeecCEEEECCCCEEEECCCCccceecCCCccccchhHHHHhhhcccccccceeccchhhhhhhhhhccccccceee
Confidence 4789999999999999999999999999999999999999999999987655 456788899999999999988889999
Q ss_pred EeCChHHHHHHHHHHHH------hccCCceEEEEccCccCCcccccccccCCCCCCCCCC--CCeeeecCCCCcCCCCCC
Q 011777 160 FVNSGTEANELAMLMAR------LSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQ--GEIHHVVNPDPYHGSFGS 231 (477)
Q Consensus 160 ~~~sGseA~~~Al~~ar------~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 231 (477)
|++||+||||.|||+|| ..++|.+|+.|+++|||++.+++++++.+.++....+ .++.++|.|++.+ +.
T Consensus 81 f~~sGseAve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~---~~ 157 (339)
T PF00202_consen 81 FANSGSEAVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAA---DE 157 (339)
T ss_dssp EESSHHHHHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHH---HH
T ss_pred eccCchHHHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccch---hh
Confidence 99999999999999999 7789999999999999999999999776554443322 4667777776543 00
Q ss_pred CHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccC
Q 011777 232 DAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQG 311 (477)
Q Consensus 232 ~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~g 311 (477)
......+++++.+.....+++++||+||+++++|.+.++++||++|+++|++||+++|+|||||||||+| ++|++++++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG-~~~a~~~~g 236 (339)
T PF00202_consen 158 EEQACLNALEELIAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTG-KFFASEHYG 236 (339)
T ss_dssp HHHHHHHHHHHHHHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTS-SSSGHHHHT
T ss_pred hHHHHHHHHHHHHHhhcCCcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccccC-Cccceeccc
Confidence 1122344555555434457899999999999999999999999999999999999999999999999999 899999999
Q ss_pred CCcceeeecccccCccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHH
Q 011777 312 VIPDIVTMAKGIGNGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTL 391 (477)
Q Consensus 312 v~pDivt~sK~lg~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l 391 (477)
+.||++|+||+++||+|+|++++++++++.+....+++||++||++|++++++|+.++++++.+++++.+++++++|+++
T Consensus 237 v~PDiv~~gK~l~gG~p~sav~~~~~i~~~~~~~~~~~T~~g~p~~~aaa~~~l~~~~~~~~~~~~~~~g~~l~~~L~~l 316 (339)
T PF00202_consen 237 VDPDIVTFGKGLGGGLPISAVLGSEEIMEAFQPGSHGSTFGGNPLSCAAALATLEILEEEDLLERVRELGERLREGLREL 316 (339)
T ss_dssp SSSSEEEEEGGGGTTSSEEEEEEEHHHHTTSCTTSSTCTTTT-HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHH
T ss_pred ccCcccccccchhhhhhcccccccchhhccccccccccccccchHhhhhhhhHHHhhccHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998778999999999999999999999999999999999999999999999
Q ss_pred HHhCCCceeeeccceeEEEEEe
Q 011777 392 QERHDIIGDVRGRGLMVGMELV 413 (477)
Q Consensus 392 ~~~~~~~~~v~g~g~~~~i~~~ 413 (477)
.++++.+..++|.|+|++++++
T Consensus 317 ~~~~~~i~~vrg~Gl~~~ie~~ 338 (339)
T PF00202_consen 317 AARYPLIGEVRGIGLMIGIELV 338 (339)
T ss_dssp HHHTTTEEEEEEETTEEEEEES
T ss_pred HHhCCCeEEEeeeCeEEEEEEE
Confidence 9999999999999999999985
No 72
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=9.7e-63 Score=499.13 Aligned_cols=369 Identities=34% Similarity=0.515 Sum_probs=323.3
Q ss_pred cCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCCCC
Q 011777 77 QKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGNLK 156 (477)
Q Consensus 77 ~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~~ 156 (477)
..|+.+++|+|+|+||.|||+||||.+|++++++||+||+|++|+.+|++++.+....+.++...+++++|++..+ .+
T Consensus 12 ~~~~~~~~~~G~~~~d~dG~~~lD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~ 89 (389)
T PRK01278 12 RADLAFERGEGVWLIDEDGERYLDFASGIAVNSLGHAHPHLVEALKEQAEKLWHVSNLYRIPEQERLAERLVENSF--AD 89 (389)
T ss_pred CCCceEEeeecCEEEECCCCEEEECCccHhhccCCCCCHHHHHHHHHHHHhcCccccccCChHHHHHHHHHHhhCC--CC
Confidence 4579999999999999999999999999999999999999999999999986655545668889999999999874 46
Q ss_pred EEEEeCChHHHHHHHHHHHHhc------cCCceEEEEccCccCCcccccccccCCCCCCCCC--CCCeeeecCCCCcCCC
Q 011777 157 VVYFVNSGTEANELAMLMARLS------TGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIP--QGEIHHVVNPDPYHGS 228 (477)
Q Consensus 157 ~v~~~~sGseA~~~Al~~ar~~------~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 228 (477)
+|+|++||+||++.|+|++|.+ +++.+||+++++|||++.+++..++.+.+..... ..++.+++.++
T Consensus 90 ~v~~~~sGseA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d----- 164 (389)
T PRK01278 90 KVFFTNSGAEAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGD----- 164 (389)
T ss_pred EEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCC-----
Confidence 8999999999999999999887 5678999999999999999988876544332211 12333332221
Q ss_pred CCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCcccc
Q 011777 229 FGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFE 308 (477)
Q Consensus 229 ~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~ 308 (477)
.++++++++ +++++|++||+++++|+++++++++++|+++|++||++||+||||+||||+| .+++++
T Consensus 165 --------~~~l~~~l~----~~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g-~~~~~~ 231 (389)
T PRK01278 165 --------IEALKAAIT----PNTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTG-KLFAHE 231 (389)
T ss_pred --------HHHHHHhhC----CCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCC-cceeec
Confidence 478888775 4799999999999999899999999999999999999999999999999999 677778
Q ss_pred ccCCCcceeeecccccCccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHH
Q 011777 309 TQGVIPDIVTMAKGIGNGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRL 388 (477)
Q Consensus 309 ~~gv~pDivt~sK~lg~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L 388 (477)
++++.||++||||++++|+|+|++++++++++.+....+.+||++||+++++++++|+.++++++.+++++++++++++|
T Consensus 232 ~~~~~pdi~t~sK~l~~G~~ig~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~l 311 (389)
T PRK01278 232 WAGVTPDIMAVAKGIGGGFPLGACLATEEAAKGMTPGTHGSTYGGNPLAMAVGNAVLDVILAPGFLDNVQRMGLYLKQKL 311 (389)
T ss_pred ccCCCCCEEEEehhccCCcceEEEEEcHHHHhccCCCCCCCCCCccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999888778889999999999999999999987788999999999999999
Q ss_pred HHHHHhCC-CceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHHHH
Q 011777 389 RTLQERHD-IIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADFLV 467 (477)
Q Consensus 389 ~~l~~~~~-~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l 467 (477)
+++..+++ .+.++++.|+++++++.. ...++.+.|+++||++.|++ .+++||+||+++++++|++++
T Consensus 312 ~~l~~~~~~~~~~v~g~G~~~~i~~~~----------~~~~~~~~l~~~GV~~~p~~--~~~lR~~p~~~~~~~~i~~~l 379 (389)
T PRK01278 312 EGLVDRFPDVIEEVRGKGLLLGLKCVV----------PNRDLVQALRDEGLLTVGAG--DNVVRLLPPLIITEEEIDEAL 379 (389)
T ss_pred HHHHhhCCCceeeEecccEEEEEEEec----------CHHHHHHHHHHCCeEEeecC--CCEEEEeCCcccCHHHHHHHH
Confidence 99877776 778899999999988842 14578899999999999875 589999999999999999999
Q ss_pred HHHHHHHhhC
Q 011777 468 DALDYSMSKL 477 (477)
Q Consensus 468 ~~l~~~l~~l 477 (477)
++|++++.++
T Consensus 380 ~~l~~~l~~~ 389 (389)
T PRK01278 380 ERLERAAESL 389 (389)
T ss_pred HHHHHHHHhC
Confidence 9999998764
No 73
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=100.00 E-value=1.8e-62 Score=502.24 Aligned_cols=407 Identities=26% Similarity=0.362 Sum_probs=332.8
Q ss_pred CHHHHHHHHhhhcCCCcc---ccc----cCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhc
Q 011777 56 SADQVFQKRKQFLGPSIF---HYY----QKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLL 128 (477)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~---~~~----~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~ 128 (477)
+|++++++.+++++-+.. .+. +.|+++++|+|+||||.|||+||||.+|++++++||+||+|++|+.+|+++.
T Consensus 1 ~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~ 80 (423)
T TIGR00713 1 KSENLFEEAKQVFPGGVNSPVRAFKSVGPTPFFVARGKGAYLYDVDGNEYIDYVLSWGPLILGHAHPRVVEAVKEALERG 80 (423)
T ss_pred CcHHHHHHHHhhCCCCCCCcccccccCCCCCeeEEeccCCEEEeCCCCEEEEccccccccccCCCCHHHHHHHHHHHHhC
Confidence 467899999999975432 112 4589999999999999999999999999999999999999999999999886
Q ss_pred cccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCC
Q 011777 129 QHATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWK 208 (477)
Q Consensus 129 ~~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~ 208 (477)
.+. .+.++...+|+++|++.++.. ++|+|++||+||++.|+|+||.++++++||.++++|||++...++.++.....
T Consensus 81 ~~~--~~~~~~~~~lae~l~~~~~~~-~~v~~~~sGseA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~ 157 (423)
T TIGR00713 81 TSY--GAPTEAEILLAKEIISRVPSV-EMVRFVNSGTEATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAAT 157 (423)
T ss_pred CcC--CCCCHHHHHHHHHHHHhCCcc-cEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccc
Confidence 432 245778899999999998763 78999999999999999999999999999999999999988777654322111
Q ss_pred CCCCC-CCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcE
Q 011777 209 YPIPQ-GEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGV 287 (477)
Q Consensus 209 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gil 287 (477)
...+. +++.....++.++.++++ .++++++++.. .+++++||+||+++++|.+.++++|+++|+++|++||++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~d-----~~~l~~~i~~~-~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~l 231 (423)
T TIGR00713 158 LGLPTSPGVPEDFAKLTLVLPYND-----LEALEEVFEEY-GEEIAGVIVEPVAGNMGVVPPKPEFLAGLRALTEEYGSL 231 (423)
T ss_pred cCCCCCCCCCcccccceEEeCCCC-----HHHHHHHHHHc-CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHhCCE
Confidence 11110 111111112223333332 57888888632 367999999999999998888899999999999999999
Q ss_pred EEEcCcccCccCCCCCCccccccCCCcceeeecccccCccceEEEEeCHHHHHhhcc---cccccCCCCcHHHHHHHHHH
Q 011777 288 CIADEVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIGNGLPLGAVVTTPEIANVMAQ---KIQFNTFGGNPVCSAGGLAV 364 (477)
Q Consensus 288 lI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pig~v~~~~~~~~~~~~---~~~~~t~~~~~~~~aaa~a~ 364 (477)
+|+||||+|| |+| ..++.+++++.||++||||++++|+|+|++++++++++.+.. ..+++||++||++|++++++
T Consensus 232 lI~DEv~~g~-r~g-~~~~~~~~~~~pDi~t~sK~l~~G~pig~v~~~~~i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~ 309 (423)
T TIGR00713 232 LIFDEVMTGF-RVA-LGGAQEYFGVEPDLTTLGKIIGGGLPVGAFGGRREIMERLAPEGPVYQAGTLSGNPLAMAAGLAT 309 (423)
T ss_pred EEEEcccccc-ccC-cchhHHHhCCCcchhhhhhhhcCCCceeeeeEHHHHHHhhCcCCCeeeccCCCCCHHHHHHHHHH
Confidence 9999999999 888 566778889999999999999999999999999999998863 34678999999999999999
Q ss_pred HHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCC-----CCccHHHHHHHHHHHHHcCce
Q 011777 365 LRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKE-----KTPAKAETAVLFEKLRELGVL 439 (477)
Q Consensus 365 l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~-----~~~~~~~~~~~~~~l~~~Gv~ 439 (477)
|+.++++++.+++++++++++++|.++.++++.+..+++.|+|+++++..+... +.++......+.+.|+++||+
T Consensus 310 l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~ 389 (423)
T TIGR00713 310 LKLLDEEGVYTELDELAKRLAEGLSEVLEDTGIPHTVNRVGSMFSLFFTEEEVTNYADAKKSDTELFAKFFHEMLDKGVF 389 (423)
T ss_pred HHHHhcccHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeccEEEEEEecCCCCChhhhhcccHHHHHHHHHHHHHCCeE
Confidence 999988789999999999999999999888988888999999999988643211 112233456788899999999
Q ss_pred eeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHHHhhC
Q 011777 440 VGKGGLHGNVFRIKPPMCFTKDDADFLVDALDYSMSKL 477 (477)
Q Consensus 440 v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~l 477 (477)
+.+.+ .+.+||+|+ +|+++|++++++|+++++++
T Consensus 390 v~~~~--~~~~~l~~~--~t~~~i~~~~~~l~~~l~~~ 423 (423)
T TIGR00713 390 LPPSQ--FEACFLSAA--HTEEDIENTIEAAEEVFAEL 423 (423)
T ss_pred EecCC--ccceeeECC--CCHHHHHHHHHHHHHHHhhC
Confidence 87643 256889876 79999999999999999764
No 74
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=1.4e-61 Score=494.15 Aligned_cols=408 Identities=25% Similarity=0.366 Sum_probs=333.8
Q ss_pred CCHHHHHHHHhhhcCCCc------cccc-cCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhh
Q 011777 55 PSADQVFQKRKQFLGPSI------FHYY-QKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKL 127 (477)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~------~~~~-~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~ 127 (477)
|++++|+++++++++-.. +..+ ..|+.+++++|+||||.||++||||.+|+++.++||+||+|++++.+|+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~G~~l~d~dG~~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~~ 81 (426)
T PRK00062 2 SKSEELFERAKKLIPGGVNSPVRAFKSVGGTPRFIERAKGAYLYDVDGNEYIDYVGSWGPMILGHAHPEVVEAVIEAAEK 81 (426)
T ss_pred chhHHHHHHHHHhCCCCcCCcccccCCCCCCCeEEEeCcCCEEEeCCCCEEEEcccchhhhhcCCCCHHHHHHHHHHHHh
Confidence 678999999988886332 1111 347899999999999999999999999999999999999999999999988
Q ss_pred ccccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCC
Q 011777 128 LQHATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTW 207 (477)
Q Consensus 128 ~~~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~ 207 (477)
..+ ..+.++...+|+++|++.++. .++|+|++||+|||+.|+|+++.++++++||.++++|||++.+....++....
T Consensus 82 ~~~--~~~~~~~~~~la~~L~~~~~~-~~~v~~~~sGseA~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~ 158 (426)
T PRK00062 82 GLS--FGAPTELEVELAELVIELVPS-IEMVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAA 158 (426)
T ss_pred CCc--CCCCCHHHHHHHHHHHHhCCC-CCEEEEecCHHHHHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCcccc
Confidence 432 234678889999999998874 67999999999999999999999999999999999999999777666432211
Q ss_pred CCCCCC-CCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCc
Q 011777 208 KYPIPQ-GEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGG 286 (477)
Q Consensus 208 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gi 286 (477)
....+. .+......+..++.++++ ++++++.++. ..+++++||+||+++++|.+.++++||++|+++|++||+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~d-----~~~l~~~i~~-~~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~ 232 (426)
T PRK00062 159 TLGLPDSPGVPEDFAKHTLTAPYND-----LEAVEELFEE-YGDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGA 232 (426)
T ss_pred ccCCCCCCCCCcccccceEEcCCCC-----HHHHHHHHHh-CCCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCC
Confidence 111010 111110011223333332 5778887763 246899999999999999999999999999999999999
Q ss_pred EEEEcCcccCccCCCCCCccccccCCCcceeeecccccCccceEEEEeCHHHHHhhcc---cccccCCCCcHHHHHHHHH
Q 011777 287 VCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIGNGLPLGAVVTTPEIANVMAQ---KIQFNTFGGNPVCSAGGLA 363 (477)
Q Consensus 287 llI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pig~v~~~~~~~~~~~~---~~~~~t~~~~~~~~aaa~a 363 (477)
++|+||||+|| |+| .++..+++++.||++++||++++|+|+|++++++++++.+.. ..+++|+++||++++++++
T Consensus 233 llI~DEv~~G~-r~g-~~~~~~~~~~~pDi~~~gK~l~~G~p~ga~~~~~~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a 310 (426)
T PRK00062 233 LLIFDEVMTGF-RVA-LGGAQGYYGVTPDLTTLGKIIGGGLPVGAFGGRREIMEQLAPLGPVYQAGTLSGNPLAMAAGLA 310 (426)
T ss_pred EEEEeechhcc-ccC-CccHHHHhCCCcchHhhhhHhhCCCcceeeeEHHHHHHhhccCCCceecccCcCCHHHHHHHHH
Confidence 99999999999 888 577778899999999999999999999999999999998852 2466799999999999999
Q ss_pred HHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCC-----CCccHHHHHHHHHHHHHcCc
Q 011777 364 VLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKE-----KTPAKAETAVLFEKLRELGV 438 (477)
Q Consensus 364 ~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~-----~~~~~~~~~~~~~~l~~~Gv 438 (477)
+|+.++++++++++++++++++++|+++..+++.+.++++.|+|+++++..+... +.++......+.+.|+++||
T Consensus 311 ~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vrg~G~~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~~Gv 390 (426)
T PRK00062 311 TLKLLKEPGFYEELEALTKRLAEGLKEAAKKAGIPLTVNRVGSMFGLFFTDEPVTNYADAKKSDTERFARFFHAMLDEGV 390 (426)
T ss_pred HHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecceEEEEEecCCCcchhhhccccHHHHHHHHHHHHHCCe
Confidence 9999988889999999999999999999888998899999999999999753211 22333445789999999999
Q ss_pred eeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHHHhhC
Q 011777 439 LVGKGGLHGNVFRIKPPMCFTKDDADFLVDALDYSMSKL 477 (477)
Q Consensus 439 ~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~l 477 (477)
++.+.+ .+.+++ ++++|++||++++++|+++++++
T Consensus 391 ~v~~~~--~~~~~~--~~~~t~~ei~~~~~~l~~~l~~~ 425 (426)
T PRK00062 391 YLAPSQ--FEAGFV--SAAHTDEDIEKTLEAARKAFAAL 425 (426)
T ss_pred EeecCC--cCceee--eccCCHHHHHHHHHHHHHHHHhh
Confidence 998754 245666 58999999999999999998753
No 75
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=100.00 E-value=3.1e-60 Score=482.42 Aligned_cols=372 Identities=30% Similarity=0.516 Sum_probs=318.9
Q ss_pred cCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCCCC
Q 011777 77 QKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGNLK 156 (477)
Q Consensus 77 ~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~~ 156 (477)
+.|+++++++|+||||.||++||||.+|+++.+|||+||+|.+++.+++++..+....+.++...+++++|++..+ .+
T Consensus 21 ~~~~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~ 98 (403)
T PRK05093 21 PAEFIPVRGEGSRVWDQQGKEYIDFAGGIAVTALGHCHPALVKALKEQGEKLWHISNVFTNEPALRLAKKLIDATF--AE 98 (403)
T ss_pred CCCeeEEEeecCEEEeCCCCEEEEcCcCHHhccCCCCCHHHHHHHHHHHHhcCcccCccCCHHHHHHHHHHHhhCC--CC
Confidence 5679999999999999999999999999999999999999999999999875544333456778899999999874 47
Q ss_pred EEEEeCChHHHHHHHHHHHHhcc------CCceEEEEccCccCCcccccccccCCCCCCCCCC--CCeeeecCCCCcCCC
Q 011777 157 VVYFVNSGTEANELAMLMARLST------GNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQ--GEIHHVVNPDPYHGS 228 (477)
Q Consensus 157 ~v~~~~sGseA~~~Al~~ar~~~------~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 228 (477)
+++|++||+|||+.|+|+||.++ ++.+||+++++|||++.+++++++...+.....+ .++.++ +
T Consensus 99 ~~~~~~sGseA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~ 170 (403)
T PRK05093 99 RVFFANSGAEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHV--------P 170 (403)
T ss_pred EEEEeCchHHHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEe--------C
Confidence 99999999999999999999885 6789999999999999988887655433222211 223333 2
Q ss_pred CCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCcccc
Q 011777 229 FGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFE 308 (477)
Q Consensus 229 ~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~ 308 (477)
+++ ++++++.+. +++++||+||+++++|++.++++|+++|+++|++||+++|+||||+|||++| .+++++
T Consensus 171 ~~d-----~~~l~~~l~----~~~aaiiiep~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g-~~~~~~ 240 (403)
T PRK05093 171 FND-----LAAVKAVID----DHTCAVVVEPIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTG-DLFAYM 240 (403)
T ss_pred CCC-----HHHHHHHhc----CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCc-cchhhh
Confidence 222 477887775 4699999999999999888999999999999999999999999999999999 677777
Q ss_pred ccCCCcceeeecccccCccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHH
Q 011777 309 TQGVIPDIVTMAKGIGNGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRL 388 (477)
Q Consensus 309 ~~gv~pDivt~sK~lg~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L 388 (477)
++++.||+.+|||++++|+|+|++++++++++.+....+..|++++|+.|++++++|+.+.++++.++++++++++++.|
T Consensus 241 ~~~~~pdi~s~sK~l~~G~rig~vv~~~~i~~~l~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~L 320 (403)
T PRK05093 241 HYGVTPDILTSAKALGGGFPIGAMLTTAEIASHFKVGTHGSTYGGNPLACAVAEAVFDIINTPEVLEGVKARRQRFVDGL 320 (403)
T ss_pred hcCCCCCEEEecccccCCcceEEEEEcHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999988767778999999999999999999877788999999999999999
Q ss_pred HHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHHHHH
Q 011777 389 RTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADFLVD 468 (477)
Q Consensus 389 ~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~ 468 (477)
+++..+++.+..+++.|+++++++... ......++.+.|+++||++.+.+ .+++||+|++.+++++|+++++
T Consensus 321 ~~~~~~~~~~~~~~~~G~~~~~~l~~~------~~~~~~~~~~~l~~~Gv~v~~~g--~~~lRl~~~~~~~~~~i~~~~~ 392 (403)
T PRK05093 321 QKINQKYGVFSEIRGMGLLIGAELKPQ------YKGRARDFLNAAAEEGVMVLVAG--PDVLRFAPSLVIEEADIDEGLA 392 (403)
T ss_pred HHHHhhCCCeEeEeeCceEEEEEecCc------chhHHHHHHHHHHHCCeEEecCC--CCEEEEeCCCCCCHHHHHHHHH
Confidence 998766777788999999999998421 01235678899999999998754 4799999999999999999999
Q ss_pred HHHHHHhh
Q 011777 469 ALDYSMSK 476 (477)
Q Consensus 469 ~l~~~l~~ 476 (477)
+|++++.+
T Consensus 393 ~l~~~l~~ 400 (403)
T PRK05093 393 RFEKAVAK 400 (403)
T ss_pred HHHHHHHH
Confidence 99998865
No 76
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=1.9e-59 Score=476.58 Aligned_cols=384 Identities=34% Similarity=0.582 Sum_probs=324.7
Q ss_pred HHHHHHHhhhcCCCccccccCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccccCC
Q 011777 58 DQVFQKRKQFLGPSIFHYYQKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIYLH 137 (477)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~~~ 137 (477)
++.++...+++.+.. ...|+++.+++|+|+||.|||+||||.+++++++|||+||+|++++.+++++..+....|.+
T Consensus 8 ~~~~~~~~~~~~~~~---~~~~~~~~~~~G~~~~d~dg~~~lD~~s~~~~~~lG~~~p~v~~ai~~~~~~~~~~~~~~~~ 84 (398)
T PRK03244 8 AELLQRWQAVMMNNY---GTPPLALVRGEGAVVWDVDGKEYLDLLGGIAVNALGHAHPAVVEAVTRQLATLGHVSNLFAT 84 (398)
T ss_pred HHHHHHHHHHhhhhc---cCCCceEEEeeecEEEECCCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhccCccCccCC
Confidence 345555445544331 24579999999999999999999999999999999999999999999999986554445777
Q ss_pred hHHHHHHHHHHhhCCCC-CCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCC--C
Q 011777 138 HAIADFAEALASKMPGN-LKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQ--G 214 (477)
Q Consensus 138 ~~~~~l~~~La~~~~~~-~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~--~ 214 (477)
+...+|+++|++.++.. .++++|++||+||++.|+++++. +++++||.++++|||++.+++..++...+...... .
T Consensus 85 ~~~~~la~~l~~~~~~~~~~~v~~~~sgsea~~~al~~~~~-~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~ 163 (398)
T PRK03244 85 EPQIALAERLVELLGAPEGGRVFFCNSGAEANEAAFKLARL-TGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPG 163 (398)
T ss_pred HHHHHHHHHHHHhCCCCCCCEEEEeCchHHHHHHHHHHHHH-HCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCC
Confidence 88889999999998743 47999999999999999999987 67889999999999999988877654332222211 1
Q ss_pred CeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcc
Q 011777 215 EIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQ 294 (477)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~ 294 (477)
++..++. + | .+++++++. +++++|++||+++++|.+.++++|+++|+++|++||+++|+||+|
T Consensus 164 ~~~~~~~--------~-d----~~~l~~~~~----~~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~ 226 (398)
T PRK03244 164 GVEHVPY--------G-D----VDALAAAVD----DDTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQ 226 (398)
T ss_pred CceEeCC--------C-C----HHHHHHhhc----CCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccc
Confidence 2232221 1 1 477777774 478999999999999999999999999999999999999999999
Q ss_pred cCccCCCCCCccccccCCCcceeeecccccCccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHH
Q 011777 295 TGFGRTGSHYWGFETQGVIPDIVTMAKGIGNGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQ 374 (477)
Q Consensus 295 ~gfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~ 374 (477)
+||||+| .+++++++++.||++||||++++|+|+|++++++++++.+....+.+||++||+++++++++|+.++++++.
T Consensus 227 ~g~gr~g-~~~~~~~~~~~pDi~t~sK~l~~G~~ig~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~ 305 (398)
T PRK03244 227 TGIGRTG-AWFAHQHDGVTPDVVTLAKGLGGGLPIGACLAFGPAADLLTPGLHGSTFGGNPVACAAALAVLDTIASEGLL 305 (398)
T ss_pred cCCcccc-hHHhhhhhCCCCCEEEEchhhhCCcccEEEEEcHHHHhhccCCCCcCCCCCCHHHHHHHHHHHHHHHhccHH
Confidence 9999999 677788889999999999999999999999999999998877678899999999999999999998888899
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCCCCEEEEeC
Q 011777 375 AHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLHGNVFRIKP 454 (477)
Q Consensus 375 ~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p 454 (477)
++++++++++++.|+++ .++.+..+++.|+++++++..+ ....+.+.|+++||++.+.+ .++|||+|
T Consensus 306 ~~~~~~~~~l~~~L~~~--~~~~~~~v~g~g~~~~i~~~~~---------~~~~~~~~l~~~Gv~~~~~~--~~~iR~~p 372 (398)
T PRK03244 306 ENAERLGEQLRAGIEAL--GHPLVDHVRGRGLLLGIVLTAP---------VAKAVEAAAREAGFLVNAVA--PDVIRLAP 372 (398)
T ss_pred HHHHHHHHHHHHHHHhc--CCCceeeEeeccEEEEEEEecc---------HHHHHHHHHHHCCeEEeecC--CCEEEEEC
Confidence 99999999999999886 4676778999999999998421 34678899999999998753 58999999
Q ss_pred CCCCcHHHHHHHHHHHHHHHhh
Q 011777 455 PMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 455 ~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
++.++++||++++++|++++.+
T Consensus 373 ~~~~t~~~i~~~~~~l~~~l~~ 394 (398)
T PRK03244 373 PLIITDAQVDAFVAALPAILDA 394 (398)
T ss_pred CCcCCHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999865
No 77
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=2e-59 Score=473.15 Aligned_cols=366 Identities=36% Similarity=0.608 Sum_probs=315.4
Q ss_pred cCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCCCC
Q 011777 77 QKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGNLK 156 (477)
Q Consensus 77 ~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~~ 156 (477)
+.|+.+++++|+|+||.|||+||||.+|+++++|||+||+|++|+.+|+++..+....+.++...+++++|.+..+ .+
T Consensus 10 ~~~~~~~~~~G~~~~d~~G~~~lD~~s~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~ 87 (377)
T PRK02936 10 RFPIDIVKGKGTKVTDNNGKTYLDFTSGIAVCNLGHCHPTVTKAVQEQLDDIWHVSNLFTNSLQEEVASLLAENSA--GD 87 (377)
T ss_pred CCCceEEEeecCEEEeCCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhcCC--CC
Confidence 3578999999999999999999999999999999999999999999999986554444567888899999998765 36
Q ss_pred EEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCC--CCeeeecCCCCcCCCCCCCHH
Q 011777 157 VVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQ--GEIHHVVNPDPYHGSFGSDAA 234 (477)
Q Consensus 157 ~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 234 (477)
+++|++||+|||+.|+++++.++++++||+++++|||++.+.++.++...++....+ .++..+ ++++
T Consensus 88 ~~~~~~sG~~a~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~d--- 156 (377)
T PRK02936 88 LVFFCNSGAEANEAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHV--------PFND--- 156 (377)
T ss_pred EEEEeCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEe--------CCCC---
Confidence 899999999999999999999999999999999999999988887654332221111 122222 2221
Q ss_pred HHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCc
Q 011777 235 RYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIP 314 (477)
Q Consensus 235 ~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~p 314 (477)
.+++++.+. +++++|++||+++++|.++++++||++|+++|++||+++|+||||+|||++| .+++++++++.|
T Consensus 157 --~~~l~~~~~----~~~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g-~~~~~~~~~~~~ 229 (377)
T PRK02936 157 --IKALKEVMN----EEVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTG-TLFAYEQFGLDP 229 (377)
T ss_pred --HHHHHHhcc----CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc-hhhHHHhhCCCC
Confidence 477887775 4689999999999999888999999999999999999999999999999999 677777889999
Q ss_pred ceeeecccccCccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHh
Q 011777 315 DIVTMAKGIGNGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQER 394 (477)
Q Consensus 315 Divt~sK~lg~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~ 394 (477)
|++||||++++|+|+|++++++++++.+....+.+||++||+++++++++|+.+..+++.+++++++++++++|+++..+
T Consensus 230 di~t~sK~l~~G~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 309 (377)
T PRK02936 230 DIVTVAKGLGNGIPVGAMIGKKELGTAFGPGSHGSTFGGNPLAMAAAKEVLQVIKQPSFLEEVQEKGEYFLQKLQEELEH 309 (377)
T ss_pred cEEEEcccccCCCccEEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999987767788999999999999999999877788999999999999999987666
Q ss_pred CCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHHH
Q 011777 395 HDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADFLVDALDYSM 474 (477)
Q Consensus 395 ~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l 474 (477)
++.+..+++.|+++++++..+ ...+.+.|+++||++.+.+ .+++||+||+.+++++|++++++|++++
T Consensus 310 ~~~~~~v~~~g~~~~i~~~~~----------~~~~~~~l~~~gv~v~~~g--~~~lRi~p~~~~~~~~i~~~i~~l~~~~ 377 (377)
T PRK02936 310 LECVKNIRGKGLMIGIECTEE----------VAPVIEQLREEGLLVLSAG--PNVIRLLPPLVVTKEELDQAVYLLKKVL 377 (377)
T ss_pred CCcEEeEeecceEEEEEecch----------HHHHHHHHHHCCeEEecCC--CCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence 787888889999999998421 4568889999999998864 5799999999999999999999998864
No 78
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=100.00 E-value=3.5e-58 Score=467.32 Aligned_cols=388 Identities=27% Similarity=0.482 Sum_probs=325.6
Q ss_pred HHHHHHHhhhcCCCccccccCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccccCC
Q 011777 58 DQVFQKRKQFLGPSIFHYYQKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIYLH 137 (477)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~~~ 137 (477)
++++++..++.... +.+.|+.+.+++|+||||.||++||||.+++++.++||+||+|++|+.++++++.+....+.+
T Consensus 2 ~~~~~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~~g~~~lD~~s~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~~~~~~ 78 (401)
T TIGR01885 2 EEAIERENKYGAHN---YHPLPVVFSKAEGVHVWDVEGKRYLDFLSAYSAVNQGHCHPKIVKALTEQAQKLTLSSRAFYN 78 (401)
T ss_pred hhHHHHHHHhhhcc---cCCCCceEEeeecCEEEeCCCCEEEEcccCHhhccCCCCCHHHHHHHHHHHHhccccccccCC
Confidence 46777777765432 234578889999999999999999999999999999999999999999999987655444467
Q ss_pred hHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhc--------cCCceEEEEccCccCCcccccccccCCCCCC
Q 011777 138 HAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLS--------TGNLGMIALRNAYHGGSSGTIGLTALNTWKY 209 (477)
Q Consensus 138 ~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~--------~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~ 209 (477)
+...+++++|+++++ .++++|++||+|||+.|++++|.+ +++..|++++++|||++.+.+++++...++.
T Consensus 79 ~~~~~l~~~l~~~~~--~~~~~~~~SGs~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~ 156 (401)
T TIGR01885 79 DVFGEFAEYVTKLFG--YDKVLPMNTGAEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRT 156 (401)
T ss_pred HHHHHHHHHHHhhcC--CCEEEEeCccHHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCccccc
Confidence 888999999999985 479999999999999999999876 3578899999999999999888876433322
Q ss_pred CCCC--CCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcE
Q 011777 210 PIPQ--GEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGV 287 (477)
Q Consensus 210 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gil 287 (477)
.... .++..++ +++ .++++++++.. ++++++|++||+++++|.+.++++||++|+++|++||++
T Consensus 157 ~~~~~~~~~~~~~--------~~d-----~~~le~~l~~~-~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~l 222 (401)
T TIGR01885 157 NFGPYVPGFKKIP--------YNN-----LEALEEALEDH-GPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVL 222 (401)
T ss_pred ccCCCCCCceEeC--------CCC-----HHHHHHHHHhc-CCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCE
Confidence 2211 2233332 221 47888888643 357999999999999999999999999999999999999
Q ss_pred EEEcCcccCccCCCCCCccccccCCCcceeeecccccCc-cceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHH
Q 011777 288 CIADEVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIGNG-LPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLR 366 (477)
Q Consensus 288 lI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg~G-~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~ 366 (477)
+|+||||+||||+| .+++++++++.||++++||++++| +|+|++++++++++.+....+..||++||++++++.++|+
T Consensus 223 li~DEv~~g~g~~G-~~~~~~~~~~~~di~~~gK~l~~g~~~ig~v~~~~~i~~~~~~~~~~~t~~~~p~~~~aa~a~L~ 301 (401)
T TIGR01885 223 LIADEIQTGLGRTG-KLLCVDHENVKPDIVLLGKALSGGVYPVSAVLADDDVMLTIKPGEHGSTYGGNPLACAVAVAALE 301 (401)
T ss_pred EEEechhhCCCccc-hhhHHhhcCCCCCEEEeeccccCCCCCcEEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHHHHH
Confidence 99999999999999 677777889999999999999986 8999999999999988765677899999999999999999
Q ss_pred hhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCC
Q 011777 367 VIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLH 446 (477)
Q Consensus 367 ~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~ 446 (477)
.++++++.+++++++++++++|+++ .++.+..+++.|+|+.+++..+. ......++.+.|.++||++.+.+
T Consensus 302 ~i~~~~l~~~~~~~~~~~~~~L~~l--~~~~~~~~~g~g~~~~i~~~~~~-----~~~~~~~l~~~l~~~Gv~v~~~~-- 372 (401)
T TIGR01885 302 VLEEEKLAENAEKLGEIFRDQLKKL--PKPIITEVRGRGLLNAIVIDESK-----TGRTAWDLCLKLKEKGLLAKPTH-- 372 (401)
T ss_pred HHHhccHHHHHHHHHHHHHHHHHhc--cCCceeEEeecCeeEEEEeccCc-----chhHHHHHHHHHHhCCEEEEecC--
Confidence 9987788899999999999999987 34667788999999999884321 01245778899999999998764
Q ss_pred CCEEEEeCCCCCcHHHHHHHHHHHHHHH
Q 011777 447 GNVFRIKPPMCFTKDDADFLVDALDYSM 474 (477)
Q Consensus 447 ~~~iRi~p~~~~t~e~i~~~l~~l~~~l 474 (477)
++.+||+||+.+|+++|++++++|++++
T Consensus 373 ~~~lRi~p~l~~t~~~i~~~l~~l~~~l 400 (401)
T TIGR01885 373 GNIIRLAPPLVITEEQLDEGLEIIKKVI 400 (401)
T ss_pred CCEEEEeCCccCCHHHHHHHHHHHHHHh
Confidence 6799999999999999999999999876
No 79
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=100.00 E-value=4.1e-58 Score=468.12 Aligned_cols=387 Identities=20% Similarity=0.291 Sum_probs=307.6
Q ss_pred HHHHHHHHhhhcCCCccc----c--c--cCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhc
Q 011777 57 ADQVFQKRKQFLGPSIFH----Y--Y--QKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLL 128 (477)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~----~--~--~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~ 128 (477)
|.++++++.++++.+... . + ..|+++++|+|+||||.|||+||||.+|++++++||+||+|++|+++|++++
T Consensus 1 s~~l~~~a~~~~p~g~~~~~~~~~~~~~~~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~ 80 (431)
T PRK06209 1 SQLLQSRLHALIPGGAHTYAKGDDQYPELAPGFIQRGSGAHVWDVDGNEYIEYGMGLRAVGLGHAYPPVVEAVREALQDG 80 (431)
T ss_pred CHHHHHHHHhhCCCCCCCCccccccCCCCCCeEEEeccCCEEEeCCCCEEEEccccccchhcCCCCHHHHHHHHHHHHhC
Confidence 357888999998754321 1 1 3578999999999999999999999999999999999999999999999986
Q ss_pred cccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEE-ccCccCCcccccccccCCCC
Q 011777 129 QHATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIAL-RNAYHGGSSGTIGLTALNTW 207 (477)
Q Consensus 129 ~~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~-~~~yhG~~~~~~~~~~~~~~ 207 (477)
.+. ...+....+|+++|++.+|. .++++|+||||||+|.|+|+||.++||.+|+.+ .++|||...+....+....
T Consensus 81 ~~~--~~~~~~~~~la~~l~~~~p~-~~~v~f~~sGseA~e~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~- 156 (431)
T PRK06209 81 CNF--TRPSAIELDAAESFLELIDG-ADMVKFCKNGSDATSAAVRLARAYTGRDLVARCADHPFFSTDDWFIGTTPMSA- 156 (431)
T ss_pred cCC--CCCCHHHHHHHHHHHHhCCc-cceEEEecCHHHHHHHHHHHHHHHhCCCeEEEeccCccccccccccccCCCCC-
Confidence 532 23345556899999999875 579999999999999999999999999999999 7888875443332211000
Q ss_pred CCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcE
Q 011777 208 KYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGV 287 (477)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gil 287 (477)
..+. .... .....++++ +++++++++. +.+++++||+||++++ .++++||++|+++|++||++
T Consensus 157 --~~~~-~~~~----~~~~~~~~d-----~~~l~~~l~~-~~~~~aavi~Epv~g~----~~~~~~l~~l~~lc~~~g~l 219 (431)
T PRK06209 157 --GIPA-SVSA----LTVTFRYND-----IASLEALFED-HPGRIACVILEPATAD----EPQDGFLHEVRRLCHENGAL 219 (431)
T ss_pred --CCCh-hHhc----cccccCCCC-----HHHHHHHHHh-CCCCEEEEEEccccCC----CCCHHHHHHHHHHHHHcCCE
Confidence 0000 0100 111122332 5788888863 3468999999999876 67899999999999999999
Q ss_pred EEEcCcccCccCCCCCCcccc-ccCCCcceeeecccccCccceEEEEeCHHHHHh--hcc------cccccCCCCcHHHH
Q 011777 288 CIADEVQTGFGRTGSHYWGFE-TQGVIPDIVTMAKGIGNGLPLGAVVTTPEIANV--MAQ------KIQFNTFGGNPVCS 358 (477)
Q Consensus 288 lI~DEv~~gfgr~G~~~~~~~-~~gv~pDivt~sK~lg~G~pig~v~~~~~~~~~--~~~------~~~~~t~~~~~~~~ 358 (477)
+|+|||++||++++ ++++ ++++.||++|+||++|+|+|+|++++++++++. +.. ..+++||++||+++
T Consensus 220 LI~DEv~tG~~~~~---~g~~~~~gv~PDi~t~gK~lggG~p~~av~~~~~i~~~~~~~~~~~~~~~~~~~T~~~np~~~ 296 (431)
T PRK06209 220 FILDEMITGFRWHM---RGAQKLYGIVPDLSCFGKALGNGFAVSALAGKREYMELGGLEHTDRERVFLLSTTHGAETHAL 296 (431)
T ss_pred EEEEcccccCCcCc---chhhHHhCCCcceeeehhhhcCCcccEEEEEHHHHHhhhcccccCCCCceeeccCCCCCHHHH
Confidence 99999999998754 3344 689999999999999999999999999999986 311 13678999999999
Q ss_pred HHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCc
Q 011777 359 AGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGV 438 (477)
Q Consensus 359 aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv 438 (477)
++++++|++++++++.+++++++++++++|+++..+++.+.++++.|.++.+++......+.+.......+.+.|+++|+
T Consensus 297 aaa~a~l~~i~~~~~~~~~~~~g~~l~~~L~~~~~~~~~~~~vr~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi 376 (431)
T PRK06209 297 AAAIATMAIYRDEDVIERLHEQGAKLAAGVNEAAAEHGLQDHVRVSGRPCCLTYSTLDGNGQPSQAFRTLFLQETIRRGV 376 (431)
T ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeecceEEEEEecCCcccCCcHHHHHHHHHHHHHCCc
Confidence 99999999999889999999999999999999988899888899999998888864332233444444578889999999
Q ss_pred eeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 439 LVGKGGLHGNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 439 ~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
++.+ +++ +..+|++||++++++|++++++
T Consensus 377 ~~p~-------l~i--s~~ht~~dId~~l~~l~~~l~~ 405 (431)
T PRK06209 377 LMPS-------LVV--SYAHGDADIERTIDAVHGALGV 405 (431)
T ss_pred cccc-------ccc--cccCCHHHHHHHHHHHHHHHHH
Confidence 8732 344 5788999999999999998864
No 80
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=100.00 E-value=1.9e-57 Score=462.33 Aligned_cols=385 Identities=28% Similarity=0.488 Sum_probs=322.0
Q ss_pred HHHHHHHHhhhcCCCccccccCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccccC
Q 011777 57 ADQVFQKRKQFLGPSIFHYYQKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIYL 136 (477)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~~ 136 (477)
++++++....+.... +++.|+.+.+++|+|+||.||++||||.++++++++||+||+|++|+.+|++++.+....+.
T Consensus 5 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~G~~~~d~~g~~~lD~~~~~~~~~~Gh~~~~i~~a~~~~~~~~~~~~~~~~ 81 (401)
T PRK00854 5 SEDLIATEQRLGAHN---YKPLDVVLTRGEGVWVWDTDGNRYLDCLSAYSAVNQGHCHPKILAAMVEQAGRLTLTSRAFR 81 (401)
T ss_pred CHHHHHHHhhhhhcc---cCCCCceEEeeeeCEEEECCCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhccccccccC
Confidence 467776554433222 23567899999999999999999999999999999999999999999999998766554456
Q ss_pred ChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhc--------cCCceEEEEccCccCCcccccccccCCCCC
Q 011777 137 HHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLS--------TGNLGMIALRNAYHGGSSGTIGLTALNTWK 208 (477)
Q Consensus 137 ~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~--------~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~ 208 (477)
++...+|+++|+++.+. ++++|++||+||+++|++++|.+ +++++||++.++|||++...++.+..+.++
T Consensus 82 ~~~~~~l~~~l~~~~~~--~~~~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~ 159 (401)
T PRK00854 82 NDQLAPLYEELAALTGS--HKVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDAR 159 (401)
T ss_pred CHHHHHHHHHHHhhCCC--CEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCcccc
Confidence 78889999999998864 68999999999999999999876 356799999999999998887776544332
Q ss_pred CCCC--CCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCc
Q 011777 209 YPIP--QGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGG 286 (477)
Q Consensus 209 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gi 286 (477)
.... ..++.+++.++ .+++++.+. +++++|++||++|++|.+.++++||++|+++|++||+
T Consensus 160 ~~~~~~~~~~~~~~~~d-------------~~~le~~i~----~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi 222 (401)
T PRK00854 160 GGFGPFTPGFRVVPFGD-------------AEALEAAIT----PNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNV 222 (401)
T ss_pred ccCCCCCCCeEEeCCCC-------------HHHHHHHhC----CCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCC
Confidence 2221 13444443221 478888775 4789999999999999999999999999999999999
Q ss_pred EEEEcCcccCccCCCCCCccccccCCCcceeeecccccCc-cceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHH
Q 011777 287 VCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIGNG-LPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVL 365 (477)
Q Consensus 287 llI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg~G-~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l 365 (477)
++|+||+|+|||++| .+++.+++++.||++++||++++| +|+|++++++++++.+....+..||++||+++++++++|
T Consensus 223 ~lI~DEv~~g~g~~g-~~~~~~~~g~~~D~~~~~K~l~gg~~~ig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aa~~a~L 301 (401)
T PRK00854 223 TLILDEIQTGLGRTG-KLLAEEHEGIEADVTLIGKALSGGFYPVSAVLSNSEVLGVLKPGQHGSTFGGNPLACAVARAAL 301 (401)
T ss_pred EEEEechhhCCCCCc-hHhHHhhcCCCCCEEEecccccCCccCeEEEEEcHHHHhcccCCCCCCCCCcCHHHHHHHHHHH
Confidence 999999999999999 566667889999999999999988 799999999999998876667889999999999999999
Q ss_pred HhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCC
Q 011777 366 RVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGL 445 (477)
Q Consensus 366 ~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~ 445 (477)
+.++++++.++++++++++.+.|+++. ...+..+++.|.|+.+++..+ .....++.+.|+++||++.+.+
T Consensus 302 ~~l~~~~~~~~~~~~~~~l~~~L~~~~--~~~~~~~~g~g~~~~i~~~~~-------~~~~~~~~~~L~~~GV~v~~~~- 371 (401)
T PRK00854 302 KVLTEEGMIENAAEMGAYFLEGLRSIR--SNIVREVRGRGLMLAVELEPE-------AGGARQYCEALKERGLLAKDTH- 371 (401)
T ss_pred HHHHHcCHHHHHHHHHHHHHHHHHhhc--cCceEEEeccceEEEEEEecC-------chhHHHHHHHHHHCCeEEecCC-
Confidence 998877789999999999999998873 344567789999999887532 1134678899999999997643
Q ss_pred CCCEEEEeCCCCCcHHHHHHHHHHHHHHHh
Q 011777 446 HGNVFRIKPPMCFTKDDADFLVDALDYSMS 475 (477)
Q Consensus 446 ~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~ 475 (477)
++++||+|++.+++++|++++++|++++.
T Consensus 372 -~~~lR~~p~~~~t~e~i~~~i~~l~~~l~ 400 (401)
T PRK00854 372 -DHTIRLAPPLVITREQVDWALEQIAKVLA 400 (401)
T ss_pred -CCEEEEeCCcccCHHHHHHHHHHHHHHhh
Confidence 57999999999999999999999999874
No 81
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=2.5e-57 Score=461.18 Aligned_cols=386 Identities=35% Similarity=0.599 Sum_probs=328.6
Q ss_pred CHHHHHHHHhhhcCCCccccccCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhcccccccc
Q 011777 56 SADQVFQKRKQFLGPSIFHYYQKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIY 135 (477)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~ 135 (477)
.+.++.++.++++... +.+.|+++++++|+|+||.|||+||||.+|++++++||+||+|.+++.+++++..+....|
T Consensus 2 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~G~~~~d~dg~~~iD~~~g~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~ 78 (396)
T PRK02627 2 TSEAIIELEKKYLMNT---YGRLPIAFVRGEGARLWDDDGKEYLDFLAGIAVNNLGHCHPKLVEAIQEQAAKLIHTSNLY 78 (396)
T ss_pred CHHHHHHHHHHhhccc---ccCCCceEEeeeeCEEEeCCCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhcccccccc
Confidence 3566767666665443 2355899999999999999999999999999999999999999999999998865544557
Q ss_pred CChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCC-----ceEEEEccCccCCcccccccccCCCCCCC
Q 011777 136 LHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGN-----LGMIALRNAYHGGSSGTIGLTALNTWKYP 210 (477)
Q Consensus 136 ~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~-----~~ii~~~~~yhG~~~~~~~~~~~~~~~~~ 210 (477)
.++...+++++|++.. +.++++|++||+||+++|+++++.++++ ++|++++++|||++...+..++...++..
T Consensus 79 ~~~~~~~la~~l~~~~--~~~~v~~~~gg~eA~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~ 156 (396)
T PRK02627 79 YIEPQEELAEKLVELS--GMDKVFFCNSGAEANEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEG 156 (396)
T ss_pred CCHHHHHHHHHHHhhc--CCCEEEECCCcHHHHHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCcccccc
Confidence 7888999999999986 4589999999999999999999988776 78999999999999988887764433221
Q ss_pred CCC--CCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEE
Q 011777 211 IPQ--GEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVC 288 (477)
Q Consensus 211 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gill 288 (477)
..+ .++..++ +++ ++++++++. +++++|++||+++++|..+++++++++|+++|++||++|
T Consensus 157 ~~~~~~~~~~~~--------~~d-----~~~l~~~i~----~~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~l 219 (396)
T PRK02627 157 FEPLVEGFIYVP--------FND-----IEALKAAIT----DKTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILL 219 (396)
T ss_pred CCCCCCCceEeC--------CCC-----HHHHHHhcC----CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEE
Confidence 111 2222222 111 477887774 578999999999999988899999999999999999999
Q ss_pred EEcCcccCccCCCCCCccccccCCCcceeeecccccCccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhh
Q 011777 289 IADEVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIGNGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVI 368 (477)
Q Consensus 289 I~DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l 368 (477)
|+||+|+|||++| .+++++..++.||+++|||++++|+|+|++++++++++.+....+..||++|+++++++.++|+.+
T Consensus 220 I~DE~~~g~g~~g-~~~~~~~~~~~pdi~t~sK~~~~G~rig~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~ 298 (396)
T PRK02627 220 ILDEVQTGMGRTG-KLFAYQHYGIEPDIMTLAKGLGGGVPIGAVLAKEKVADVFTPGDHGSTFGGNPLACAAALAVIEII 298 (396)
T ss_pred EEechhcCCCccC-ceeeehhcCCCCCEEEEcchhhCCcccEEEEEcHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 9999999999999 677778889999999999999999999999999999998876667889999999999999999998
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCCCC
Q 011777 369 DKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLHGN 448 (477)
Q Consensus 369 ~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~ 448 (477)
+++++.+++++++++++++|.++..+++.+..+++.|+++++++.. ...++.+.|+++||++.+++ .+
T Consensus 299 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~----------~~~~~~~~l~~~Gv~v~~~~--~~ 366 (396)
T PRK02627 299 EEEGLLENAAEVGEYLRAKLRELLEKYPGIKEVRGLGLMIGIELDR----------PAAEIVKKALEKGLLINVTG--DN 366 (396)
T ss_pred hhccHHHHHHHHHHHHHHHHHHHHHhCCCeeeeccCcEEEEEEecC----------cHHHHHHHHHHCCeEEeecC--CC
Confidence 8888999999999999999999877777777888999999998821 14578889999999999865 47
Q ss_pred EEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 449 VFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 449 ~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
++||+|++.++++++++++++|++++++
T Consensus 367 ~lRi~~~~~~~~~~i~~~~~~l~~~l~~ 394 (396)
T PRK02627 367 VLRLLPPLIISKEEIDEAVDRLEEVLKE 394 (396)
T ss_pred EEEEECCcccCHHHHHHHHHHHHHHHHh
Confidence 8999999999999999999999999875
No 82
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=100.00 E-value=7.7e-57 Score=458.01 Aligned_cols=373 Identities=27% Similarity=0.464 Sum_probs=315.4
Q ss_pred cCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCCCC
Q 011777 77 QKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGNLK 156 (477)
Q Consensus 77 ~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~~ 156 (477)
+.|+.+++++|+|+||.|||+||||.+|+++.++||+||+|++|+.++++++.+....+.++...++++.|++..+ .+
T Consensus 12 ~~~~~~~~~~G~~~~d~dg~~~lD~~~~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~ 89 (400)
T PTZ00125 12 PLPVVLKRGKGVFVWDVEGKKYYDFLSAYSAVNQGHCHPKILAALINQAQKLTLTSRAFYNDVLGLAEKYITDLFG--YD 89 (400)
T ss_pred CCCccEEeeecCEEEeCCCCEEEEcccCHhhccCCcCCHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHhCCC--CC
Confidence 4578999999999999999999999999999999999999999999999887665544456777888888887763 47
Q ss_pred EEEEeCChHHHHHHHHHHHHhc--------cCCceEEEEccCccCCcccccccccCCCCCCCCCC--CCeeeecCCCCcC
Q 011777 157 VVYFVNSGTEANELAMLMARLS--------TGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQ--GEIHHVVNPDPYH 226 (477)
Q Consensus 157 ~v~~~~sGseA~~~Al~~ar~~--------~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 226 (477)
+++|++||+|||+.|+++++.+ +++.+||+++++|||.+.+.++.+....+.....+ .++..++.
T Consensus 90 ~~~~~~SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 164 (400)
T PTZ00125 90 KVLPMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDY----- 164 (400)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCC-----
Confidence 9999999999999999999854 24678999999999999998887754322211111 13333321
Q ss_pred CCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCcc
Q 011777 227 GSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWG 306 (477)
Q Consensus 227 ~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~ 306 (477)
+ | +++++++++ .+++++|++||+++++|.+.++++|+++|+++|++||+++|+||||+|||++| .++.
T Consensus 165 ---~-d----~~~le~~l~---~~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G-~~~~ 232 (400)
T PTZ00125 165 ---N-D----VEALEKLLQ---DPNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTG-KLLA 232 (400)
T ss_pred ---C-C----HHHHHHHhC---CCCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc-hhhH
Confidence 1 1 578888885 35799999999999999999999999999999999999999999999999999 6777
Q ss_pred ccccCCCcceeeecccccCc-cceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHH
Q 011777 307 FETQGVIPDIVTMAKGIGNG-LPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLL 385 (477)
Q Consensus 307 ~~~~gv~pDivt~sK~lg~G-~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~ 385 (477)
.+.+++.||++++||++++| +|+|++++++++++.+....+..|+++||+.++++.++|+.++++++.+++++++++++
T Consensus 233 ~~~~~~~pd~~~~sK~l~~g~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~i~~~~~~~~~~~~~~~l~ 312 (400)
T PTZ00125 233 HDHEGVKPDIVLLGKALSGGLYPISAVLANDDVMLVIKPGEHGSTYGGNPLACAVAVEALEVLKEEKLAENAQRLGEVFR 312 (400)
T ss_pred HHhcCCCCCEEEEcccccCCCcCcEEEEEcHHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 77889999999999999988 49999999999999887666778999999999999999999887788999999999999
Q ss_pred HHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHH
Q 011777 386 GRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADF 465 (477)
Q Consensus 386 ~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~ 465 (477)
++|+++...++.+..+++.|+++++++..+ .......+.+.|+++||++.+++ ++++||+|++.+++++|++
T Consensus 313 ~~l~~l~~~~~~~~~~~~~g~~~~v~~~~~------~~~~~~~~~~~l~~~Gv~v~~~~--~~~lRi~~~~~~~~~~i~~ 384 (400)
T PTZ00125 313 DGLKELLKKSPWVKEIRGKGLLNAIVFDHS------DGVNAWDLCLKLKENGLLAKPTH--DNIIRFAPPLVITKEQLDQ 384 (400)
T ss_pred HHHHHHHhcCCCeEEEecccEEEEEEEccC------cchHHHHHHHHHHHCCeEEeecC--CCEEEEECCccCCHHHHHH
Confidence 999998767777778899999999988431 12245678899999999998864 6899999999999999999
Q ss_pred HHHHHHHHHhh
Q 011777 466 LVDALDYSMSK 476 (477)
Q Consensus 466 ~l~~l~~~l~~ 476 (477)
++++|++++++
T Consensus 385 ~l~~l~~~l~~ 395 (400)
T PTZ00125 385 ALEIIKKVLKS 395 (400)
T ss_pred HHHHHHHHHHH
Confidence 99999998875
No 83
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=2.4e-56 Score=450.09 Aligned_cols=364 Identities=30% Similarity=0.528 Sum_probs=307.8
Q ss_pred cCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCCCC
Q 011777 77 QKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGNLK 156 (477)
Q Consensus 77 ~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~~ 156 (477)
+.|+++++++|+||||.||++||||.+|++++++|| ||+|++|+.++++++.+....+.++...+++++|... ...
T Consensus 10 ~~~~~~~~~~G~~l~d~dg~~~lD~~s~~~~~~lG~-~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~---~~~ 85 (375)
T PRK04260 10 RAAIEFVKAEGNYLIDTDGKKYLDFSSGIGVTNLGF-HPQVQQALQKQAGLIWHSPNLYLNSLQEEVAQKLIGD---KDY 85 (375)
T ss_pred CCCceEEEeeeCEEEeCCCCEEEECCCCcccccCCC-CHHHHHHHHHHHHhcCcccCccCCHHHHHHHHHHhcC---cCC
Confidence 357899999999999999999999999999999999 9999999999998764433344566667777766542 123
Q ss_pred EEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCC--CCeeeecCCCCcCCCCCCCHH
Q 011777 157 VVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQ--GEIHHVVNPDPYHGSFGSDAA 234 (477)
Q Consensus 157 ~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 234 (477)
.++|++||+|||+.|++++|.++++++||+++++|||++..+++.++...+...... ..+... +++ |
T Consensus 86 ~~~~~~SGseA~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~-d-- 154 (375)
T PRK04260 86 LAFFCNSGAEANEAAIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYA--------IFN-D-- 154 (375)
T ss_pred EEEEcCccHHHHHHHHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEe--------CCC-C--
Confidence 689999999999999999999999999999999999999888877654332221111 111111 121 1
Q ss_pred HHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCc
Q 011777 235 RYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIP 314 (477)
Q Consensus 235 ~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~p 314 (477)
++++++++. +++++|++||+++++|++.++++||++++++|+++|+++|+||+|+|||++| .++.++.+++.|
T Consensus 155 --l~~l~~~l~----~~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g-~~~~~~~~~~~p 227 (375)
T PRK04260 155 --LNSVKALVN----KNTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTG-KLYAFEHYGIEP 227 (375)
T ss_pred --HHHHHHhcC----CCeEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc-chhhhHhhCCCC
Confidence 477777664 4689999999999999999999999999999999999999999999999999 677777889999
Q ss_pred ceeeecccccCccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHh
Q 011777 315 DIVTMAKGIGNGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQER 394 (477)
Q Consensus 315 Divt~sK~lg~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~ 394 (477)
|++||||++++|+|+|++++++++++.+....+.+||++|+++++++.++|+.++.+++.+++++.++++++++.++..+
T Consensus 228 di~t~sK~l~~G~~ig~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 307 (375)
T PRK04260 228 DIFTLAKGLANGVPVGAMLAKSSLGGAFGYGSHGSTFGGNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQLQKALQD 307 (375)
T ss_pred CEEEecccccCCcceEEEEEcHHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999887667889999999999999999999988889999999999999999998888
Q ss_pred CCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHHH
Q 011777 395 HDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADFLVDALDYSM 474 (477)
Q Consensus 395 ~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l 474 (477)
++.+..+++.|+++++++.. ....+.+.|+++||++.+.+ .+.+||+||+.++++|+++++++|++++
T Consensus 308 ~~~~~~~~~~g~~~~~~~~~----------~~~~~~~~l~~~Gi~v~~~~--~~~lR~~~~~~~t~~~i~~~l~~l~~~~ 375 (375)
T PRK04260 308 KETVTTVRGLGYMIGIETTA----------DLSQLVEAARDKGLIVLTAG--TNVIRLLPPLTLTKEEIEQGIAILSEVF 375 (375)
T ss_pred CCCeeEEeccceEEEEEecC----------cHHHHHHHHHhCCCEEecCC--CCEEEEcCCCccCHHHHHHHHHHHHHhC
Confidence 87778888999999999832 13578899999999998764 4789999999999999999999998763
No 84
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=100.00 E-value=8.3e-56 Score=452.51 Aligned_cols=404 Identities=41% Similarity=0.660 Sum_probs=329.3
Q ss_pred HhhhcCCCccccccCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccc-cCChHHHH
Q 011777 64 RKQFLGPSIFHYYQKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTI-YLHHAIAD 142 (477)
Q Consensus 64 ~~~~~~~~~~~~~~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~-~~~~~~~~ 142 (477)
.+++++.... ....|+++++++|.++||.||++||||.+|++++++||+||+|++++.+++.+..+.... +.++...+
T Consensus 5 ~~~~~~~~~~-~~~~~~~~~~~~g~~~~d~dG~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~ 83 (413)
T cd00610 5 DRKVLWHGYT-VRPYPLVIVRAEGAYLYDVDGNRYLDFLSGIGVLNLGHNHPEVVEALKEQLAKLTHFSLGFFYNEPAVE 83 (413)
T ss_pred hhhhcccccc-CCCCCceEEeeecCEEEeCCCCEEEEcCccHHhhccCCCCHHHHHHHHHHHHhCcCccCcccCCHHHHH
Confidence 3445443322 225689999999999999999999999999999999999999999999999876443322 25778999
Q ss_pred HHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCC--CCeeeec
Q 011777 143 FAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQ--GEIHHVV 220 (477)
Q Consensus 143 l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 220 (477)
++++|+++++...++++|++||+||++.|+++++.++++++|++++++|||++...+..++...+...... ..+..++
T Consensus 84 l~~~l~~~~~~~~~~v~~~~sgsea~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (413)
T cd00610 84 LAELLLALTPEGLDKVFFVNSGTEAVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVP 163 (413)
T ss_pred HHHHHHHhCCCCCCEEEEcCcHHHHHHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeC
Confidence 99999999986678999999999999999999998899999999999999999988887654322211111 2233333
Q ss_pred CCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCC
Q 011777 221 NPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRT 300 (477)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~ 300 (477)
.+.+.+. ..+....+++|+++++. +++++++|++||+++++|.+.++++|+++|+++|++||+++|+||+|+||||+
T Consensus 164 ~~~~~~~--~~~~~~d~~~l~~~l~~-~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~ 240 (413)
T cd00610 164 YPYRYRP--PAELADDLEALEEALEE-HPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRT 240 (413)
T ss_pred CCccccc--hhhHHHHHHHHHHHHhc-CCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcC
Confidence 2211110 01122235677777763 23578999999999999988999999999999999999999999999999999
Q ss_pred CCCCccccccCCCcceeeecccccCccceEEEEeCHHHHHhh--cccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHH
Q 011777 301 GSHYWGFETQGVIPDIVTMAKGIGNGLPLGAVVTTPEIANVM--AQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCA 378 (477)
Q Consensus 301 G~~~~~~~~~gv~pDivt~sK~lg~G~pig~v~~~~~~~~~~--~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~ 378 (477)
| ..+.++.+++.||++++||++++|+|+|++++++++++.+ ....+.+|+++|+++++++.++|+.++++++.++++
T Consensus 241 g-~~~~~~~~~~~~d~~t~sK~l~~g~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~l~~~~~~~~~~ 319 (413)
T cd00610 241 G-KMFAFEHFGVEPDIVTLGKGLGGGLPLGAVLGREEIMDAFPAGPGLHGGTFGGNPLACAAALAVLEVLEEEGLLENAA 319 (413)
T ss_pred c-chhhHhhcCCCCCeEEEcccccCccccEEEEEcHHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHhccHHHHHH
Confidence 8 5667788899999999999999999999999999999986 445677899999999999999999998888999999
Q ss_pred HHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCCCCEEEEeCCCCC
Q 011777 379 DVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLHGNVFRIKPPMCF 458 (477)
Q Consensus 379 ~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~ 458 (477)
+++++++++|+++...++.+..+++.|.++++.+..+.....++......+.+.|+++||++.+++ ++.+|++|++.+
T Consensus 320 ~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~~~~--~~~lR~~~~~~~ 397 (413)
T cd00610 320 ELGEYLRERLRELAEKHPLVGDVRGRGLMIGIELVKDRATKPPDKELAAKIIKAALERGLLLRPSG--GNVIRLLPPLII 397 (413)
T ss_pred HHHHHHHHHHHHHHhhCCcEEEeecCceEEEEEEecCCCcCCcchHHHHHHHHHHHHCCeEEeecC--CCEEEEECCCcC
Confidence 999999999999876667777788999999999865422222333456778999999999999875 688999999999
Q ss_pred cHHHHHHHHHHHHHHH
Q 011777 459 TKDDADFLVDALDYSM 474 (477)
Q Consensus 459 t~e~i~~~l~~l~~~l 474 (477)
|++||++++++|++++
T Consensus 398 t~~~i~~~~~~l~~~l 413 (413)
T cd00610 398 TEEEIDEGLDALDEAL 413 (413)
T ss_pred CHHHHHHHHHHHHHhC
Confidence 9999999999998764
No 85
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=3.3e-54 Score=398.44 Aligned_cols=422 Identities=27% Similarity=0.390 Sum_probs=344.4
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCCHHHHHHHHhhhcCCCccccccCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCC
Q 011777 34 AVATTPPQLPPFDHDPKPYTGPSADQVFQKRKQFLGPSIFHYYQKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHC 113 (477)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~ 113 (477)
..+.++|+.|.+.+. ++|||+++++.++..++......++ +...++.-|.|++|+|||.+||.++.+.++++||+
T Consensus 19 ~~~n~ep~gP~ikTe--sIPGPks~~l~kel~~v~~t~~v~F---~~dYEkS~GNYlvDvDGN~lLDvYsQIsSvplGYn 93 (484)
T KOG1405|consen 19 VDVNFEPDGPSIKTE--SIPGPKSQELKKELDKVQDTEAVHF---FVDYEKSIGNYLVDVDGNRLLDVYSQISSVPLGYN 93 (484)
T ss_pred cccccCCCCCccccc--cCCCchhHHHHHHHhHhhcccceEE---ehhhhhhcCceEEecCCCeeehhhhhhcccccCCC
Confidence 344559999988865 5999999999999888876543333 25667889999999999999999999999999999
Q ss_pred CHHHHHHHHH-HHhh-ccccc--cccCC-hHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhcc---------
Q 011777 114 HPDVLNAIFE-QSKL-LQHAT--TIYLH-HAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLST--------- 179 (477)
Q Consensus 114 ~p~v~~Av~~-~l~~-~~~~~--~~~~~-~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~--------- 179 (477)
||.++++... +..+ +.... ..++. +..+.+.+.|....|.+.+.|++.-+|+.|||.|+|.|..+-
T Consensus 94 ~P~LvK~a~~p~~~~~lvnRPALg~fP~kd~~~~l~~~ll~~APKG~~~v~tm~cGs~aNEnA~K~afiwy~~k~rg~~~ 173 (484)
T KOG1405|consen 94 NPALVKAAQQPQNATMLVNRPALGNFPPKDFAEKLRQSLLSIAPKGQKQVITMLCGSCANENAYKTAFIWYRAKERGQAG 173 (484)
T ss_pred CHHHHHHhcChHHHHHHhccccccCCChhhHHHHHHHHHHhhCcchHHHHHHHhccccccHHHHHHHHHHHHhhcCCCCC
Confidence 9999998753 2222 22111 12332 234445555666678888999999999999999999885431
Q ss_pred -----------------CCceEEEEccCccCCcccccccccC-CCCCCCCCCCCeeeecCCCCcCCCCCC-------CHH
Q 011777 180 -----------------GNLGMIALRNAYHGGSSGTIGLTAL-NTWKYPIPQGEIHHVVNPDPYHGSFGS-------DAA 234 (477)
Q Consensus 180 -----------------~~~~ii~~~~~yhG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~ 234 (477)
+.-.|++|.++|||++.+.++.+.. +.++..+|..+|.+.++|. |+.|.+. .+.
T Consensus 174 ~s~~e~eScm~n~aPg~P~lsvlsF~gaFHGR~~g~lstT~SKpIHKldiPaFdWPiA~fP~-ykYPLdenv~~N~ked~ 252 (484)
T KOG1405|consen 174 FSAEELESCMINQAPGAPDLSVLSFKGAFHGRTFGSLSTTHSKPIHKLDIPAFDWPIAPFPR-YKYPLDENVAENKKEDQ 252 (484)
T ss_pred CCHHHHHHHHhcCCCCCCceeeeeeccccccccccccccccCccccccCCCCCCCCCCCCcc-ccCChhhhhhhhhhhhh
Confidence 1237999999999999999999864 4678888888888888775 5556543 245
Q ss_pred HHHHHHHHHHhccC--CCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCC
Q 011777 235 RYAQDLQDHIDFGT--SGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGV 312 (477)
Q Consensus 235 ~~~~~le~~i~~~~--~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv 312 (477)
.|++++|++|...+ ...+|++|+||||++||..-.+++|+++|+++|+|||+.+|+||||||-|-|| ++|+.++|++
T Consensus 253 ~Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTG-k~WaHehw~l 331 (484)
T KOG1405|consen 253 GCLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATG-KFWAHEHWNL 331 (484)
T ss_pred hHHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccC-ceeeehhcCC
Confidence 68999999998543 34799999999999999999999999999999999999999999999999999 8999999988
Q ss_pred --CcceeeecccccCccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHH
Q 011777 313 --IPDIVTMAKGIGNGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRT 390 (477)
Q Consensus 313 --~pDivt~sK~lg~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~ 390 (477)
.||+|||||-|-.| |+ .-.++++-. ....+++||.|.|.-.....+++++|.++++.+++...|+.|..+|.+
T Consensus 332 ~~PpD~vTFSKK~q~g---Gf-fh~~~frpn-~pYrifNTWmGdP~k~lll~~vv~~I~~~~Ll~n~~~vG~~l~~gL~~ 406 (484)
T KOG1405|consen 332 DSPPDVVTFSKKFQTG---GF-FHDEEFRPN-EPYRIFNTWMGDPSKNLLLEEVVQEIKREDLLNNVAHVGKALLKGLLE 406 (484)
T ss_pred CCCccceehhhhhhcC---cc-ccCcccCCC-chHHHhhhhcCChHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 58999999999854 43 333333211 123467999999999999999999999999999999999999999999
Q ss_pred HHHhCC-CceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHHHHHH
Q 011777 391 LQERHD-IIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADFLVDA 469 (477)
Q Consensus 391 l~~~~~-~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~ 469 (477)
+.+++| .+..+||+|.|+.+++ |.+..-+.+...++-+|+.++.+| ...|||+|+++.++...+-++++
T Consensus 407 Lq~~~p~~~~~~RGrGTF~a~d~--------ps~~~Rdk~i~~~~~nGv~~GGCg--~~siRfRPsLvf~~~Ha~i~l~~ 476 (484)
T KOG1405|consen 407 LQAKYPGKINNLRGRGTFIAWDC--------PSGSIRDKLILIARLNGVNLGGCG--DKSIRFRPSLVFRKHHADIFLDI 476 (484)
T ss_pred HHHhCchhhhcccccceEEEEeC--------CChHHHHHHHHHHHHcCceecccc--cceeeeccceeehhhhHHHHHHH
Confidence 999996 5778999999999998 444556788999999999998765 56899999999999999999999
Q ss_pred HHHHHhhC
Q 011777 470 LDYSMSKL 477 (477)
Q Consensus 470 l~~~l~~l 477 (477)
|+++++.+
T Consensus 477 ~~k~l~~l 484 (484)
T KOG1405|consen 477 FDKILAGL 484 (484)
T ss_pred HHHHhccC
Confidence 99998754
No 86
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=100.00 E-value=5.2e-50 Score=405.09 Aligned_cols=365 Identities=38% Similarity=0.625 Sum_probs=304.9
Q ss_pred cCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCCCC
Q 011777 77 QKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGNLK 156 (477)
Q Consensus 77 ~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~~ 156 (477)
+.|+.+++++|.++||.||++||||.+|+++++|||+||.|.+++.+++++..+....|.++...+|+++|+++++ .+
T Consensus 8 ~~~~~~~~~~g~~~~~~~g~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g--~~ 85 (379)
T TIGR00707 8 RLPVKIVRGKGAYVYDVNGKEYLDFVAGIAVNSLGHAHPKLVEALKEQLEKLVHVSNLYYTEPQEELAEKLVEHSG--AD 85 (379)
T ss_pred CCCccEEEeecCEEEeCCCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhCC--CC
Confidence 4689999999999999999999999999999999999999999999999886554455678889999999999985 46
Q ss_pred EEEEeCChHHHHHHHHHHHHhccC-----CceEEEEccCccCCcccccccccCCCCCCCCCC--CCeeeecCCCCcCCCC
Q 011777 157 VVYFVNSGTEANELAMLMARLSTG-----NLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQ--GEIHHVVNPDPYHGSF 229 (477)
Q Consensus 157 ~v~~~~sGseA~~~Al~~ar~~~~-----~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 229 (477)
++++++||+||++.++++++.+++ +++|++++++|||+...+...++...+...... ..+... ++
T Consensus 86 ~~~~~~sg~~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~ 157 (379)
T TIGR00707 86 RVFFCNSGAEANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYA--------PY 157 (379)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceee--------CC
Confidence 999999999999999999887665 689999999999999888777654322111000 111111 12
Q ss_pred CCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccc
Q 011777 230 GSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFET 309 (477)
Q Consensus 230 ~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~ 309 (477)
+ | .+++++.+. +++++|+++|+++++|.++++.+++++|.++|++||+++|+||+|++|+++| ..+.++.
T Consensus 158 ~-d----~~~l~~~~~----~~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g-~~~~~~~ 227 (379)
T TIGR00707 158 N-D----IESLKKAID----DETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTG-KFFAYEH 227 (379)
T ss_pred C-C----HHHHHHHhh----hCeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc-hhhhHHh
Confidence 2 1 477777775 3678999999999999877899999999999999999999999999999988 5555566
Q ss_pred cCCCcceeeecccccCccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHH
Q 011777 310 QGVIPDIVTMAKGIGNGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLR 389 (477)
Q Consensus 310 ~gv~pDivt~sK~lg~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~ 389 (477)
.++.||+++|||++++|+|+||+++++++++.+....+..+|+.|+++++++.++|+.++.+++.+++++++++++++|.
T Consensus 228 ~~~~~d~~t~sK~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~aaL~~~~~~~~~~~~~~~~~~~~~~l~ 307 (379)
T TIGR00707 228 YGIEPDIITLAKGLGGGVPIGATLAKEEVAEAFTPGDHGSTFGGNPLACAAALAVLEVIEKERLLENVKEKGDYFKERLE 307 (379)
T ss_pred cCCCCCEEEEcccccCCcccEEEEEcHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 78899999999999999999999999999999887667788999999999999999988777788999999999999998
Q ss_pred HHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHHHHHH
Q 011777 390 TLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADFLVDA 469 (477)
Q Consensus 390 ~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~ 469 (477)
++....+. ..+++.|.++++++..+ ..++.+.|+++||++.+.+ .+++||+|++.++++++++++++
T Consensus 308 ~~~~~~~~-~~~~~~g~~~~~~~~~~----------~~~~~~~l~~~Gv~v~~~~--~~~lRi~~~~~~t~~~i~~~~~~ 374 (379)
T TIGR00707 308 ELGKNYPN-KEVRGKGLMLGIELEAP----------CKDIVKKALEKGLLVNCAG--PKVLRFLPPLIITKEEIDEAVSA 374 (379)
T ss_pred HHHhhCCC-CccccCceEEEEEecCc----------HHHHHHHHHHCCcEEeeCC--CCEEEEECCCcCCHHHHHHHHHH
Confidence 87555443 44566788989887321 3578888999999999864 47899999999999999999999
Q ss_pred HHHHH
Q 011777 470 LDYSM 474 (477)
Q Consensus 470 l~~~l 474 (477)
|++++
T Consensus 375 l~~~~ 379 (379)
T TIGR00707 375 LEEAI 379 (379)
T ss_pred HHHhC
Confidence 98764
No 87
>PRK07505 hypothetical protein; Provisional
Probab=100.00 E-value=8.1e-39 Score=325.36 Aligned_cols=348 Identities=15% Similarity=0.182 Sum_probs=248.6
Q ss_pred CceeEEeeeccEEEeCCCCEEEeecCCcccccCC-CCCHHHHHHHHHHHhhcc--c-ccc--ccCChHHHHHHHHHHhhC
Q 011777 78 KPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCG-HCHPDVLNAIFEQSKLLQ--H-ATT--IYLHHAIADFAEALASKM 151 (477)
Q Consensus 78 ~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lG-h~~p~v~~Av~~~l~~~~--~-~~~--~~~~~~~~~l~~~La~~~ 151 (477)
.++.+++|+|+++||.||++||||.+. ..+| |+||+|++|+.+|+++.. + ... .+.++...+++++|++++
T Consensus 28 ~~~~~~~~~G~~~~d~~g~~~ld~~s~---~~lgl~~~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~la~~~ 104 (402)
T PRK07505 28 NGLTVGEREGILITLADGHTFVNFVSC---SYLGLDTHPAIIEGAVDALKRTGSLHLSSSRTRVRSQILKDLEEALSELF 104 (402)
T ss_pred ccceeeccCCccEEecCCceEEEeecC---CccCCCCCHHHHHHHHHHHHHhCCCCCCccchhhhhHHHHHHHHHHHHHh
Confidence 457899999999999999999999883 4788 999999999999998743 2 111 234677899999999998
Q ss_pred CCCCCEEEEeCChHHHHHHHHHHHHh--cc-CCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCC
Q 011777 152 PGNLKVVYFVNSGTEANELAMLMARL--ST-GNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGS 228 (477)
Q Consensus 152 ~~~~~~v~~~~sGseA~~~Al~~ar~--~~-~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (477)
+. ++++++||++|++.++++++. ++ ++.++|+++++|||........ ... ..++..++.+
T Consensus 105 ~~---~~~~~~sG~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~------~~~--~~~v~~~~~~------ 167 (402)
T PRK07505 105 GA---SVLTFTSCSAAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGI------CAD--ETEVETIDHN------ 167 (402)
T ss_pred CC---CEEEECChHHHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhh------hhc--CCeEEEeCCC------
Confidence 65 577788999999999998764 23 5667999999999843211110 000 1133333321
Q ss_pred CCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcc--cCccCCCCCCcc
Q 011777 229 FGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQ--TGFGRTGSHYWG 306 (477)
Q Consensus 229 ~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~--~gfgr~G~~~~~ 306 (477)
| .++++++++ ++..+++++||++++|+ +.+ +++|.++|++||++||+||+| ++||++| ..+.
T Consensus 168 ---d----~~~l~~~~~---~~~~~~vl~~p~~~~G~-~~~----~~~i~~l~~~~~~~li~DEa~~~~~~g~~g-~~~~ 231 (402)
T PRK07505 168 ---D----LDALEDICK---TNKTVAYVADGVYSMGG-IAP----VKELLRLQEKYGLFLYIDDAHGLSIYGKNG-EGYV 231 (402)
T ss_pred ---C----HHHHHHHHh---cCCCEEEEEecccccCC-cCC----HHHHHHHHHHcCCEEEEECcccccCcCCCC-CchH
Confidence 1 477888775 24578999999988755 555 899999999999999999998 6789988 5666
Q ss_pred ccccCC-Cccee----eecccccCccceEEEEe-CHHHHHhhcccccccCCCCc--HHHHHHHHHHHHhhchhhHHHHHH
Q 011777 307 FETQGV-IPDIV----TMAKGIGNGLPLGAVVT-TPEIANVMAQKIQFNTFGGN--PVCSAGGLAVLRVIDKERRQAHCA 378 (477)
Q Consensus 307 ~~~~gv-~pDiv----t~sK~lg~G~pig~v~~-~~~~~~~~~~~~~~~t~~~~--~~~~aaa~a~l~~l~~~~~~~~~~ 378 (477)
.+++++ .||.+ |+||+++++ .|+++. ++++.+.+....+..||+++ +++++++.++++.+.++.+.+.
T Consensus 232 ~~~~~~~~~d~~i~~~s~sK~~~~~--Gg~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~~~~~~~~~~~-- 307 (402)
T PRK07505 232 RSELDYRLNERTIIAASLGKAFGAS--GGVIMLGDAEQIELILRYAGPLAFSQSLNVAALGAILASAEIHLSEELDQL-- 307 (402)
T ss_pred HHHcCCCCCCCeEEEEechhhhhcc--CeEEEeCCHHHHHHHHHhCCCceeCCCCCHHHHHHHHHHHHHHhccCcHHH--
Confidence 677776 67744 799999853 267664 78888888766666777655 6899999999986655443332
Q ss_pred HHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCC-----CCCEEEEe
Q 011777 379 DVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGL-----HGNVFRIK 453 (477)
Q Consensus 379 ~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~-----~~~~iRi~ 453 (477)
.++++++++.+... ....+++.++++...... .......+.+.|+++||++.+... ..+++||+
T Consensus 308 --~~~l~~~~~~~~~~--~~~~~~g~~~~i~~~~~~-------~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~lRi~ 376 (402)
T PRK07505 308 --QQKLQNNIALFDSL--IPTEQSGSFLPIRLIYIG-------DEDTAIKAAKQLLDRGFYTSPVFFPVVAKGRAGLRIM 376 (402)
T ss_pred --HHHHHHHHHHHHHH--HHhcCCCCCCCEEEEEeC-------CHHHHHHHHHHHHHCCCeEeeecCCCCCCCCceEEEe
Confidence 23333333322111 012235556554322211 112356788999999999987521 23689999
Q ss_pred CCCCCcHHHHHHHHHHHHHHHhh
Q 011777 454 PPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 454 p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
|++.+|++|+++++++|++++++
T Consensus 377 ~~~~~t~eei~~~~~~l~~~l~~ 399 (402)
T PRK07505 377 FRASHTNDEIKRLCSLLKEILDE 399 (402)
T ss_pred cCccCCHHHHHHHHHHHHHHHHh
Confidence 99999999999999999998864
No 88
>PLN02822 serine palmitoyltransferase
Probab=100.00 E-value=4.8e-36 Score=309.34 Aligned_cols=354 Identities=13% Similarity=0.073 Sum_probs=261.0
Q ss_pred eeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccc-----cccCChHHHHHHHHHHhhCCCC
Q 011777 80 LNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHAT-----TIYLHHAIADFAEALASKMPGN 154 (477)
Q Consensus 80 ~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~-----~~~~~~~~~~l~~~La~~~~~~ 154 (477)
+++.+++|.+++ .||++||||.++.+.... .||+|++++.++++++...+ ..+.++...+|+++|+++++.
T Consensus 94 ~~~~~~~G~~i~-~~G~~~id~~s~~~lgl~--~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~~- 169 (481)
T PLN02822 94 PVLESAAGPHTI-INGKDVVNFASANYLGLI--GNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLGT- 169 (481)
T ss_pred CceecCCCCeEE-ECCceEEEeECCCcCCCC--CCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhCC-
Confidence 478889999999 899999999988664322 58999999999999854321 123567799999999999985
Q ss_pred CCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHH
Q 011777 155 LKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAA 234 (477)
Q Consensus 155 ~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (477)
.+.++|++|++ ++..+++ .++++.++|++++.||+.....+.+.+. .+..+ +++ |
T Consensus 170 ~~~i~~s~G~~-a~~sai~---a~~~~gd~Ii~d~~~H~s~~~~~~ls~~----------~~~~~--------~~n-d-- 224 (481)
T PLN02822 170 PDSILYSYGLS-TIFSVIP---AFCKKGDIIVADEGVHWGIQNGLYLSRS----------TIVYF--------KHN-D-- 224 (481)
T ss_pred CCEEEECCHHH-HHHHHHH---HhCCCCCEEEEeCCccHHHHHHHHHcCC----------eEEEE--------CCC-C--
Confidence 36788887666 6777777 4467778888999999887655554432 11111 111 1
Q ss_pred HHHHHHHHHHhccC-----CCCe-eEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCccc--CccCCCCCCcc
Q 011777 235 RYAQDLQDHIDFGT-----SGKV-AGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQT--GFGRTGSHYWG 306 (477)
Q Consensus 235 ~~~~~le~~i~~~~-----~~~~-a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~--gfgr~G~~~~~ 306 (477)
.++++..++... .+++ ++|++|++++++|.+.+ |++|+++|++||++||+||+|+ .+|++| .. .
T Consensus 225 --~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~~----L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G-~G-~ 296 (481)
T PLN02822 225 --MESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIAP----LDEIVRLKEKYRFRVLLDESNSFGVLGKSG-RG-L 296 (481)
T ss_pred --HHHHHHHHHHHhhhhcccCCCcEEEEEecCCCCCCCccC----HHHHHHHHHHcCCEEEEECCccccccCCCC-CC-h
Confidence 234444443211 1234 89999999999998888 9999999999999999999998 446667 33 4
Q ss_pred ccccCC---Ccceee--ecccccC-ccceEEEEeCHHHHHhhcccccccCCCCc--HHHHHHHHHHHHhhch-hhHHHHH
Q 011777 307 FETQGV---IPDIVT--MAKGIGN-GLPLGAVVTTPEIANVMAQKIQFNTFGGN--PVCSAGGLAVLRVIDK-ERRQAHC 377 (477)
Q Consensus 307 ~~~~gv---~pDivt--~sK~lg~-G~pig~v~~~~~~~~~~~~~~~~~t~~~~--~~~~aaa~a~l~~l~~-~~~~~~~ 377 (477)
.+++++ .+|+++ |||++|. | |++++++++++.+....++.+|+++ |..++|++++|+.+++ +++.+++
T Consensus 297 ~e~~~v~~~~~dii~~s~sKalg~~G---G~i~g~~~ii~~~~~~~~~~~fsa~lPp~~~~Aa~~aL~~l~~~~~~~~~l 373 (481)
T PLN02822 297 SEHFGVPIEKIDIITAAMGHALATEG---GFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEDNPSVLAKL 373 (481)
T ss_pred HHHcCCCCCCCeEEEecchhhhhhCC---eEEEcCHHHHHHHHhcCCceeeccccCHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 577887 689887 7899983 5 8999999999998877778899877 8889999999998765 6788999
Q ss_pred HHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHH-HcCceeeccC--CC-----CCE
Q 011777 378 ADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLR-ELGVLVGKGG--LH-----GNV 449 (477)
Q Consensus 378 ~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~--~~-----~~~ 449 (477)
++++++++++|+++. ++.....+.+.++.+.+.........+.....++++.|+ ++||++.++. .+ ...
T Consensus 374 ~~~~~~l~~~L~~~~---g~~~~~~~~spi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~ 450 (481)
T PLN02822 374 KENIALLHKGLSDIP---GLSIGSNTLSPIVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVG 450 (481)
T ss_pred HHHHHHHHHHHHhcC---CcccCCCCCCCEEEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCc
Confidence 999999999998752 221222345667777773211111112233567888887 8899998652 11 246
Q ss_pred EEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 450 FRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 450 iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
+|++.+..+|++||++++++|++++.+
T Consensus 451 lRi~is~~~t~edI~~~~~~l~~~~~~ 477 (481)
T PLN02822 451 IRLFVSAGHTESDILKASESLKRVAAS 477 (481)
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998765
No 89
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=100.00 E-value=7.4e-34 Score=289.36 Aligned_cols=331 Identities=20% Similarity=0.198 Sum_probs=246.1
Q ss_pred CCCEEEeecCCcccccCCC-CCHHHHHHHHHHHhhccccc-----cccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHH
Q 011777 94 NGRRYLDAFAGIVTVSCGH-CHPDVLNAIFEQSKLLQHAT-----TIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEA 167 (477)
Q Consensus 94 dG~~ylD~~~g~~~~~lGh-~~p~v~~Av~~~l~~~~~~~-----~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA 167 (477)
+|+++|+|+++.+ ||. +||+|++|+.++++++.+.. ..+.++...+|+++|+++++. +.++|++||++|
T Consensus 43 ~~~~~~~~~sn~y---lgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~--~~~~~~~SG~~A 117 (406)
T PRK13393 43 GPREVTVWCSNDY---LGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHGK--EAALLFTSGYVS 117 (406)
T ss_pred CCccEEEeecccc---cCCCCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhCC--CcEEEeCCcHHH
Confidence 4689999998765 787 69999999999999865421 113345789999999999964 678999999999
Q ss_pred HHHHHH-HHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhc
Q 011777 168 NELAML-MARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDF 246 (477)
Q Consensus 168 ~~~Al~-~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~ 246 (477)
|+.|++ +++.+ ++++|+++..||+.+...+...+.. +..++ ++ | .++++++++.
T Consensus 118 n~~ai~~l~~~~--~g~~I~~~~~~H~s~~~~~~~~g~~----------~~~~~--------~~-d----~~~l~~~l~~ 172 (406)
T PRK13393 118 NWAALSTLGSRL--PGCVILSDELNHASMIEGIRHSRAE----------KRIFR--------HN-D----PADLERKLSD 172 (406)
T ss_pred HHHHHHHhhcCC--CCCEEEEccchhHHHHHHHHHcCCe----------EEEeC--------CC-C----HHHHHHHHHh
Confidence 999999 45432 3468888999999877665443211 11111 11 1 3667777764
Q ss_pred cCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCccc-Cc-cCCCCCCccccccCCC--ccee--eec
Q 011777 247 GTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQT-GF-GRTGSHYWGFETQGVI--PDIV--TMA 320 (477)
Q Consensus 247 ~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~-gf-gr~G~~~~~~~~~gv~--pDiv--t~s 320 (477)
..++++++|++|++++++|.+.+ +++|.++|++||+++|+||+|+ |+ |++| ..+ .+++++. +|++ |||
T Consensus 173 ~~~~~~~~v~~~~v~~~~G~~~~----l~~i~~l~~~~~~~livDea~~~g~~g~~G-~g~-~~~~~~~~~~~i~~~tls 246 (406)
T PRK13393 173 LDPHRPKLVAFESVYSMDGDIAP----IAEICDVAEKHGAMTYLDEVHAVGLYGPRG-GGI-AEREGLADRLTIIEGTLA 246 (406)
T ss_pred ccCCCCEEEEEcCCCCCCCchhC----HHHHHHHHHHcCCEEEEECCccccccCCCC-Cch-hhhcCCCCCCeEEEEeCc
Confidence 33346789999999999998888 9999999999999999999997 66 7777 333 3555654 5777 899
Q ss_pred ccccC-ccceEEEEeCHHHHHhhcccccc--cCCCCcHHHHHHHHHHHHhhchhh-HHHHHHHHHHHHHHHHHHHHHhCC
Q 011777 321 KGIGN-GLPLGAVVTTPEIANVMAQKIQF--NTFGGNPVCSAGGLAVLRVIDKER-RQAHCADVGSHLLGRLRTLQERHD 396 (477)
Q Consensus 321 K~lg~-G~pig~v~~~~~~~~~~~~~~~~--~t~~~~~~~~aaa~a~l~~l~~~~-~~~~~~~~~~~l~~~L~~l~~~~~ 396 (477)
|++|. | ||+++++++++.+...... .+.+.+|.+++++.++|+.+++.. ..+++.++++++++.|+++ .++
T Consensus 247 Ka~g~~G---G~~~~~~~~~~~l~~~~~~~~~t~~~~p~~~aa~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~ 321 (406)
T PRK13393 247 KAFGVMG---GYITGSAALCDFIRSFASGFIFTTSLPPAVAAGALASVRHLKASSAERERHQDRVARLRARLDKA--GIP 321 (406)
T ss_pred hhhcccC---ceeeCCHHHHHHHHHhCcCceecCccCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHc--CCC
Confidence 99984 5 8889999998887654332 366788999999999999876432 3455667888888888764 222
Q ss_pred CceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHH-cCceeeccC----C-CCCEEEEeCCCCCcHHHHHHHHHHH
Q 011777 397 IIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRE-LGVLVGKGG----L-HGNVFRIKPPMCFTKDDADFLVDAL 470 (477)
Q Consensus 397 ~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~----~-~~~~iRi~p~~~~t~e~i~~~l~~l 470 (477)
.+++.|.|+.+.+.. ......+.+.|++ +||++.+.. . ..+.+||+|++.+|++|+++++++|
T Consensus 322 ---~~~~~~~i~~v~~~~--------~~~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~~~t~edid~l~~~l 390 (406)
T PRK13393 322 ---HLPNPSHIVPVMVGD--------PVLCKQISDELLDRYGIYVQPINYPTVPRGTERLRITPSPLHTDADIEHLVQAL 390 (406)
T ss_pred ---cCCCCCCeEEEEeCC--------HHHHHHHHHHHHHhCCEEEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHH
Confidence 235678887775421 1235678888887 599997642 1 2368999999999999999999999
Q ss_pred HHHHhh
Q 011777 471 DYSMSK 476 (477)
Q Consensus 471 ~~~l~~ 476 (477)
++++.+
T Consensus 391 ~~~~~~ 396 (406)
T PRK13393 391 SEIWAR 396 (406)
T ss_pred HHHHHh
Confidence 998764
No 90
>PRK09064 5-aminolevulinate synthase; Validated
Probab=100.00 E-value=2.6e-32 Score=278.32 Aligned_cols=331 Identities=19% Similarity=0.212 Sum_probs=240.3
Q ss_pred CCEEEeecCCcccccCCCC-CHHHHHHHHHHHhhccccc----cc-cCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHH
Q 011777 95 GRRYLDAFAGIVTVSCGHC-HPDVLNAIFEQSKLLQHAT----TI-YLHHAIADFAEALASKMPGNLKVVYFVNSGTEAN 168 (477)
Q Consensus 95 G~~ylD~~~g~~~~~lGh~-~p~v~~Av~~~l~~~~~~~----~~-~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~ 168 (477)
|++++||+++.+ ||++ ||+|++|+.+++++..+.. .. +.++...+|+++|+++++. +..++++||++||
T Consensus 45 ~~~~~~~~s~dy---lgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g~--~~~~~~~sG~~an 119 (407)
T PRK09064 45 EREVTVWCSNDY---LGMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLHGK--EAALVFTSGYVSN 119 (407)
T ss_pred CceEEEEECCCC---cCCCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhCC--CcEEEECcHHHHH
Confidence 699999987754 7876 9999999999998864321 11 2467789999999999863 5678889999999
Q ss_pred HHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccC
Q 011777 169 ELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGT 248 (477)
Q Consensus 169 ~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~ 248 (477)
+.+++++.... ++.+++.+..+|+.....+...+.+ +...+ .+ | .++++++++...
T Consensus 120 ~~ai~~l~~~~-~~~~i~~~~~~h~s~~~~~~~~~~~----------~~~~~--------~~-d----~~~le~~l~~~~ 175 (407)
T PRK09064 120 DATLSTLAKLI-PDCVIFSDELNHASMIEGIRRSRCE----------KHIFR--------HN-D----VAHLEELLAAAD 175 (407)
T ss_pred HHHHHHHhCCC-CCCEEEEeCcchHHHHHHHHHcCCc----------EEEEC--------CC-C----HHHHHHHHHhcc
Confidence 99999876442 3456666655676543333222111 11111 11 1 477888876433
Q ss_pred CCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCccc-C-ccCCCCCCccccccCC--Cccee--eeccc
Q 011777 249 SGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQT-G-FGRTGSHYWGFETQGV--IPDIV--TMAKG 322 (477)
Q Consensus 249 ~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~-g-fgr~G~~~~~~~~~gv--~pDiv--t~sK~ 322 (477)
++++++|++|++++++|.+.+ +++|.++|++||++||+||+|+ | ||++| ..+ .++.++ .+|++ ||||+
T Consensus 176 ~~~~~~v~~~~v~s~~G~~~~----l~~i~~l~~~~~~~livDEa~~~G~~g~~g-~g~-~~~~~~~~~~div~~t~sKa 249 (407)
T PRK09064 176 PDRPKLIAFESVYSMDGDIAP----IAEICDLADKYNALTYLDEVHAVGMYGPRG-GGI-AERDGLMDRIDIIEGTLAKA 249 (407)
T ss_pred CCCCeEEEEeCCCCCCccccC----HHHHHHHHHHcCCEEEEECCCcccccCCCC-CCh-HHhcCCCCCCeEEEEecchh
Confidence 346789999999999998887 9999999999999999999998 5 57777 333 345554 46887 89999
Q ss_pred ccC-ccceEEEEeCHHHHHhhcccc--cccCCCCcHHHHHHHHHHHHhhchh-hHHHHHHHHHHHHHHHHHHHHHhCCCc
Q 011777 323 IGN-GLPLGAVVTTPEIANVMAQKI--QFNTFGGNPVCSAGGLAVLRVIDKE-RRQAHCADVGSHLLGRLRTLQERHDII 398 (477)
Q Consensus 323 lg~-G~pig~v~~~~~~~~~~~~~~--~~~t~~~~~~~~aaa~a~l~~l~~~-~~~~~~~~~~~~l~~~L~~l~~~~~~~ 398 (477)
+|. | |++++++++++.+.... +..+.+.+|.++++++++++.+++. ...+++.++++++++.|+++ .+..
T Consensus 250 ~g~~G---G~~~~~~~~~~~l~~~~~~~~~t~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~- 323 (407)
T PRK09064 250 FGVMG---GYIAGSAALVDAVRSYAPGFIFTTSLPPAIAAAALASIRHLKESNEERERHQERAAKLKAALDAA--GIPV- 323 (407)
T ss_pred hhccC---ceEecCHHHHHHHHHhCccccccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc--CCCC-
Confidence 984 5 88999999988776432 2235578899999999999988764 34577888899999888775 2222
Q ss_pred eeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHH-cCceeeccCC-----CCCEEEEeCCCCCcHHHHHHHHHHHHH
Q 011777 399 GDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRE-LGVLVGKGGL-----HGNVFRIKPPMCFTKDDADFLVDALDY 472 (477)
Q Consensus 399 ~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~~-----~~~~iRi~p~~~~t~e~i~~~l~~l~~ 472 (477)
+...+.++.+.+. ......++.+.|++ +||++.+... ..+++||+|++.+|++|++++++.|++
T Consensus 324 --~~~~~~iv~i~~~--------~~~~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRis~~~~~t~edi~~l~~~l~~ 393 (407)
T PRK09064 324 --MPNESHIVPVMVG--------DPEKCKKASDMLLEEHGIYVQPINYPTVPRGTERLRITPTPFHTDEMIDHLVEALVE 393 (407)
T ss_pred --CCCCCCEEEEEeC--------CHHHHHHHHHHHHHhCCEEEeeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 2234666666552 11235678888875 5999976421 236899999999999999999999999
Q ss_pred HHhh
Q 011777 473 SMSK 476 (477)
Q Consensus 473 ~l~~ 476 (477)
++++
T Consensus 394 ~~~~ 397 (407)
T PRK09064 394 VWAR 397 (407)
T ss_pred HHHH
Confidence 8764
No 91
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=100.00 E-value=3.5e-32 Score=276.83 Aligned_cols=333 Identities=19% Similarity=0.181 Sum_probs=241.3
Q ss_pred CCCCEEEeecCCcccccCCC-CCHHHHHHHHHHHhhcccccc-----ccCChHHHHHHHHHHhhCCCCCCEEEEeCChHH
Q 011777 93 ENGRRYLDAFAGIVTVSCGH-CHPDVLNAIFEQSKLLQHATT-----IYLHHAIADFAEALASKMPGNLKVVYFVNSGTE 166 (477)
Q Consensus 93 ~dG~~ylD~~~g~~~~~lGh-~~p~v~~Av~~~l~~~~~~~~-----~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGse 166 (477)
.+|+++++|.++.+ ||. +||+|++|+.++++++.+... .+.++...+|+++|+++++. +..++++||++
T Consensus 42 ~~~~~~~~~~sn~y---lgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g~--~~~l~~~sG~~ 116 (402)
T TIGR01821 42 DGAKDVTVWCSNDY---LGMGQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHGK--ESALVFTSGYV 116 (402)
T ss_pred CCCeeEEEeEccCc---CCCCCCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhCC--CeEEEECchHH
Confidence 34699999988765 554 599999999999998653221 13467789999999999964 56889999999
Q ss_pred HHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhc
Q 011777 167 ANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDF 246 (477)
Q Consensus 167 A~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~ 246 (477)
||+.+++++... .++.+|+.+..||+.....+...+.+ +...+ ++ | .++++++++.
T Consensus 117 an~~ai~~l~~~-~~~~~v~~~~~~h~s~~~~~~~~g~~----------~~~~~--------~~-d----~~~l~~~l~~ 172 (402)
T TIGR01821 117 ANDATLATLAKI-IPGCVIFSDELNHASMIEGIRHSGAE----------KFIFR--------HN-D----VAHLEKLLQS 172 (402)
T ss_pred HHHHHHHHhhCC-CCCCEEEEcchHhHHHHHHHHHcCCe----------EEEEC--------CC-C----HHHHHHHHHh
Confidence 999999987643 23567777788998765544432211 11111 11 1 3677877764
Q ss_pred cCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCccc-Cc-cCCCCCCccccccCC--Cccee--eec
Q 011777 247 GTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQT-GF-GRTGSHYWGFETQGV--IPDIV--TMA 320 (477)
Q Consensus 247 ~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~-gf-gr~G~~~~~~~~~gv--~pDiv--t~s 320 (477)
..++++++|++|++++++|.+.+ +++|.++|++||+++|+||+|+ |+ |..| .. ..+++++ .+|++ |||
T Consensus 173 ~~~~~~~~v~~e~~~~~~G~~~~----l~~i~~l~~~~~~~livDea~~~G~~g~~g-~g-~~~~~~~~~~~div~~t~s 246 (402)
T TIGR01821 173 VDPNRPKIIAFESVYSMDGDIAP----IEEICDLADKYGALTYLDEVHAVGLYGPRG-GG-IAERDGLMHRIDIIEGTLA 246 (402)
T ss_pred ccCCCCeEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEeCcccccccCCCC-Cc-cchhccCCCCCeEEEEech
Confidence 33346789999999999998877 9999999999999999999998 42 4444 21 1244554 46877 899
Q ss_pred ccccC-ccceEEEEeCHHHHHhhcccc--cccCCCCcHHHHHHHHHHHHhhchh-hHHHHHHHHHHHHHHHHHHHHHhCC
Q 011777 321 KGIGN-GLPLGAVVTTPEIANVMAQKI--QFNTFGGNPVCSAGGLAVLRVIDKE-RRQAHCADVGSHLLGRLRTLQERHD 396 (477)
Q Consensus 321 K~lg~-G~pig~v~~~~~~~~~~~~~~--~~~t~~~~~~~~aaa~a~l~~l~~~-~~~~~~~~~~~~l~~~L~~l~~~~~ 396 (477)
|++|+ | ||+++++++++.+.... +..|.+.||.++++++++|+.+++. .+.++..+++++++++|+++ .++
T Consensus 247 Ka~g~~G---G~i~~~~~~~~~l~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~ 321 (402)
T TIGR01821 247 KAFGVVG---GYIAASRKLIDAIRSYAPGFIFTTSLPPAIAAGATASIRHLKESQDLRRAHQENVKRLKNLLEAL--GIP 321 (402)
T ss_pred hhhccCC---ceeecCHHHHHHHHHhCcCceecCcCCHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHc--CCC
Confidence 99984 5 78999999998876432 2245678899999999999987654 34566677888888888764 222
Q ss_pred CceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHH-cCceeeccC-----CCCCEEEEeCCCCCcHHHHHHHHHHH
Q 011777 397 IIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRE-LGVLVGKGG-----LHGNVFRIKPPMCFTKDDADFLVDAL 470 (477)
Q Consensus 397 ~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~-----~~~~~iRi~p~~~~t~e~i~~~l~~l 470 (477)
. +.+.+.++.+.+. ......++.+.|++ +||++.+.. ...+++||+|++.+|++||++++++|
T Consensus 322 ~---~~~~~~i~~i~~~--------~~~~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis~~~~~t~edi~~~~~~l 390 (402)
T TIGR01821 322 V---IPNPSHIVPVIIG--------DAALCKKVSDLLLNKHGIYVQPINYPTVPRGTERLRITPTPAHTDKMIDDLVEAL 390 (402)
T ss_pred c---CCCCCCEEEEEeC--------CHHHHHHHHHHHHhcCCEEEEeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHH
Confidence 2 2345677766542 11234568888865 599987641 12368999999999999999999999
Q ss_pred HHHHhh
Q 011777 471 DYSMSK 476 (477)
Q Consensus 471 ~~~l~~ 476 (477)
++++++
T Consensus 391 ~~~~~~ 396 (402)
T TIGR01821 391 LLVWDR 396 (402)
T ss_pred HHHHHH
Confidence 998865
No 92
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=100.00 E-value=2.4e-31 Score=269.39 Aligned_cols=347 Identities=19% Similarity=0.209 Sum_probs=243.5
Q ss_pred ccCceeEEeeeccEEEeCCCCEEEeecCCcccccCCC-CCHHHHHHHHHHHhhccccc-----cccCChHHHHHHHHHHh
Q 011777 76 YQKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGH-CHPDVLNAIFEQSKLLQHAT-----TIYLHHAIADFAEALAS 149 (477)
Q Consensus 76 ~~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh-~~p~v~~Av~~~l~~~~~~~-----~~~~~~~~~~l~~~La~ 149 (477)
|+.-.++.+++|.+||+ +|++|||+.++. ++|| ++|+|++++.+++....... ..+..+...++++.+++
T Consensus 20 ~~~~~~~~~~~g~~~~~-~g~~~id~~~~~---~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~ 95 (385)
T PRK05958 20 YRSLRPREGGAGRWLVV-DGRRMLNFASND---YLGLARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAE 95 (385)
T ss_pred CccccccccCCCceeEe-CCceEEEeeCCC---cccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHH
Confidence 33335788999999997 999999999874 4787 78999999999998643211 12345678899999999
Q ss_pred hCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCC
Q 011777 150 KMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSF 229 (477)
Q Consensus 150 ~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (477)
+++. +.++++++|++++..+++.. ..+++.|++. ..+|+.........+. .+..++.+
T Consensus 96 ~~~~--~~~i~~~~g~~~~~~~l~~~--~~~gd~V~~~-~~~~~~~~~~~~~~g~----------~~~~~~~~------- 153 (385)
T PRK05958 96 WFGA--ERALLFSSGYAANLAVLTAL--AGKGDLIVSD-KLNHASLIDGARLSRA----------RVRRYPHN------- 153 (385)
T ss_pred HhCC--CcEEEECcHHHHHHHHHHHh--CCCCCEEEEe-CccCHHHHHHHHhcCC----------ceEEeCCC-------
Confidence 9863 56778888999999877644 2244555554 5556654443333221 11112111
Q ss_pred CCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccC--ccCCCCCCccc
Q 011777 230 GSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTG--FGRTGSHYWGF 307 (477)
Q Consensus 230 ~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g--fgr~G~~~~~~ 307 (477)
| .++++++++.. .+++++++++++++++|.+.+ +++|.++|++||+++|+||+|+. ++++|..+...
T Consensus 154 --d----~~~l~~~i~~~-~~~~~lvi~~~~~~~~G~~~~----l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~ 222 (385)
T PRK05958 154 --D----VDALEALLAKW-RAGRALIVTESVFSMDGDLAP----LAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAE 222 (385)
T ss_pred --C----HHHHHHHHHhc-cCCCeEEEEEecccCCCCcCC----HHHHHHHHHHhCCEEEEECcccccccCCCCCchHHh
Confidence 1 47788887632 124788999999988887665 99999999999999999999963 34444211111
Q ss_pred cccCCCcc---eeeecccccCccceEEEEeCHHHHHhhccc--ccccCCCCcHHHHHHHHHHHHhhch-hhHHHHHHHHH
Q 011777 308 ETQGVIPD---IVTMAKGIGNGLPLGAVVTTPEIANVMAQK--IQFNTFGGNPVCSAGGLAVLRVIDK-ERRQAHCADVG 381 (477)
Q Consensus 308 ~~~gv~pD---ivt~sK~lg~G~pig~v~~~~~~~~~~~~~--~~~~t~~~~~~~~aaa~a~l~~l~~-~~~~~~~~~~~ 381 (477)
......+| +.++||++++ +.|++++++++++.+... .+..+.+.+++.++++.++|+.+++ +++.+++.+++
T Consensus 223 ~~~~~~~~~i~~~s~sK~~~~--~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~ 300 (385)
T PRK05958 223 AGLAGEPDVILVGTLGKALGS--SGAAVLGSETLIDYLINRARPFIFTTALPPAQAAAARAALRILRREPERRERLAALI 300 (385)
T ss_pred hCCCCCCceEEEEechhhccc--CCcEEEcCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 11223455 5579999974 228999999988876532 2334456788888889899987765 36778888888
Q ss_pred HHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCC-----CCCEEEEeCCC
Q 011777 382 SHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGL-----HGNVFRIKPPM 456 (477)
Q Consensus 382 ~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~-----~~~~iRi~p~~ 456 (477)
+++.+.|+++ ... .+.+.|.++++.+. ......++.+.|+++||.+.+... ..+++||+|+.
T Consensus 301 ~~l~~~L~~~--~~~---~~~~~~~~~~~~~~--------~~~~~~~~~~~l~~~gI~v~~~~~~~~~~~~~~lRis~~~ 367 (385)
T PRK05958 301 ARLRAGLRAL--GFQ---LMDSQSAIQPLIVG--------DNERALALAAALQEQGFWVGAIRPPTVPAGTSRLRITLTA 367 (385)
T ss_pred HHHHHHHHHc--CCC---cCCCCCCEEEEEeC--------CHHHHHHHHHHHHHCCceEecccCCCCCCCCceEEEEecC
Confidence 8898888875 122 23456778887762 123456788999999999976321 23689999999
Q ss_pred CCcHHHHHHHHHHHHHHH
Q 011777 457 CFTKDDADFLVDALDYSM 474 (477)
Q Consensus 457 ~~t~e~i~~~l~~l~~~l 474 (477)
.++++|+++++++|++++
T Consensus 368 ~~~~~~i~~~l~~l~~~~ 385 (385)
T PRK05958 368 AHTEADIDRLLEALAEAL 385 (385)
T ss_pred CCCHHHHHHHHHHHHhcC
Confidence 999999999999998764
No 93
>PRK07179 hypothetical protein; Provisional
Probab=100.00 E-value=1.9e-31 Score=271.78 Aligned_cols=337 Identities=19% Similarity=0.182 Sum_probs=238.4
Q ss_pred cccCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhcc---ccccccC--ChHHHHHHHHHHh
Q 011777 75 YYQKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQ---HATTIYL--HHAIADFAEALAS 149 (477)
Q Consensus 75 ~~~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~---~~~~~~~--~~~~~~l~~~La~ 149 (477)
+.+.+++..++.|.+++|-+||+|||+. +||+|++++.+++++.. +.+..+. .+...+|+++|++
T Consensus 41 ~~~~~~~~~~~~g~~~~~~~~~~YL~l~----------~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~ 110 (407)
T PRK07179 41 WNGKHLVLGKTPGPDAIILQSNDYLNLS----------GHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAA 110 (407)
T ss_pred cCCceEEeecCCCCcEEEeecCCccCCC----------CCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHH
Confidence 3456889999999999999999999986 68999999999998752 2222232 3578899999999
Q ss_pred hCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCC
Q 011777 150 KMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSF 229 (477)
Q Consensus 150 ~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (477)
+++. +.++|++||++||+++++.... +++.|++. ...|......... .+...++++.
T Consensus 111 ~~g~--~~~~~~~sG~~An~~~l~~l~~--~g~~v~~~-~~~h~s~~~~~~~------------~g~~~~~~~~------ 167 (407)
T PRK07179 111 FTGF--ESCLLCQSGWAANVGLLQTIAD--PNTPVYID-FFAHMSLWEGVRA------------AGAQAHPFRH------ 167 (407)
T ss_pred HhCC--CcEEEECCHHHHHHHHHHHhCC--CCCEEEEE-CCcCHHHHHHHHH------------CCCeEEEecC------
Confidence 9865 5678999999999999986643 34455543 3333322111111 1222222111
Q ss_pred CCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccC--ccCCCCCCccc
Q 011777 230 GSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTG--FGRTGSHYWGF 307 (477)
Q Consensus 230 ~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g--fgr~G~~~~~~ 307 (477)
+ | +++++++++. .++++|+++++++++|.+.+ +++|.++|++||+++|+||+|+. +|++| ..+ +
T Consensus 168 ~-d----~~~l~~~l~~---~~~~lV~v~~v~n~tG~i~p----l~~I~~l~~~~~~~livDea~~~g~~g~~g-~g~-~ 233 (407)
T PRK07179 168 N-D----VDHLRRQIER---HGPGIIVVDSVYSTTGTIAP----LADIVDIAEEFGCVLVVDESHSLGTHGPQG-AGL-V 233 (407)
T ss_pred C-C----HHHHHHHHHh---cCCeEEEECCCCCCCCcccc----HHHHHHHHHHcCCEEEEECcccccCcCCCC-Cch-H
Confidence 1 1 4788888862 24689999999999998887 89999999999999999999973 24455 221 3
Q ss_pred cccCCC--ccee--eecccccCccceEEEEeCHHHHHhhcccc----cccCCCCcHHHHHHHHHHHHhhchh-hHHHHHH
Q 011777 308 ETQGVI--PDIV--TMAKGIGNGLPLGAVVTTPEIANVMAQKI----QFNTFGGNPVCSAGGLAVLRVIDKE-RRQAHCA 378 (477)
Q Consensus 308 ~~~gv~--pDiv--t~sK~lg~G~pig~v~~~~~~~~~~~~~~----~~~t~~~~~~~~aaa~a~l~~l~~~-~~~~~~~ 378 (477)
..+++. +|++ +++|++++ ++|++++++++++.+.... +++|+ ++..++++.++++.+... +..++++
T Consensus 234 ~~~~~~~~vdi~~~S~sK~~g~--~~G~l~~~~~~~~~~~~~~~~~~~~~t~--~~~~~aa~~aal~~~~~~~~~~~~l~ 309 (407)
T PRK07179 234 AELGLTSRVHFITASLAKAFAG--RAGIITCPRELAEYVPFVSYPAIFSSTL--LPHEIAGLEATLEVIESADDRRARLH 309 (407)
T ss_pred HhcCCCCCCCEEEeechHhhhc--cCeEEEeCHHHHHHHHHhCcCeeeCCCC--CHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 445553 4775 47899974 6899999999888775322 22333 345555666778776553 5778899
Q ss_pred HHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceee----ccCC-CCCEEEEe
Q 011777 379 DVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVG----KGGL-HGNVFRIK 453 (477)
Q Consensus 379 ~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~----~~~~-~~~~iRi~ 453 (477)
++.+++++.|.++ .+ .+.+.+.++++.+.. ......+.+.|.++||++. +... ..+++||+
T Consensus 310 ~~~~~l~~~L~~~--g~----~v~~~~~i~~l~~~~--------~~~~~~~~~~L~~~GI~~~~~~~p~~~~~~~~lRis 375 (407)
T PRK07179 310 ANARFLREGLSEL--GY----NIRSESQIIALETGS--------ERNTEVLRDALEERNVFGAVFCAPATPKNRNLIRLS 375 (407)
T ss_pred HHHHHHHHHHHHc--CC----CCCCCCCEEEEEeCC--------HHHHHHHHHHHHHCCceEeeecCCCCCCCCceEEEE
Confidence 9999999998775 22 233567788877521 1234678889999999732 3211 24789999
Q ss_pred CCCCCcHHHHHHHHHHHHHHHhh
Q 011777 454 PPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 454 p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
++..+|++||++++++|++++++
T Consensus 376 ~~~~~t~edi~~~~~~l~~~~~~ 398 (407)
T PRK07179 376 LNADLTASDLDRVLEVCREARDE 398 (407)
T ss_pred ECCCCCHHHHHHHHHHHHHHHHh
Confidence 99999999999999999998764
No 94
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=100.00 E-value=6.8e-31 Score=266.12 Aligned_cols=348 Identities=15% Similarity=0.128 Sum_probs=240.1
Q ss_pred ccCceeEEeeeccEEEeCCCCEEEeecCCcccccCCC-CCHHHHHHHHHHHhhccccc-----cccCChHHHHHHHHHHh
Q 011777 76 YQKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGH-CHPDVLNAIFEQSKLLQHAT-----TIYLHHAIADFAEALAS 149 (477)
Q Consensus 76 ~~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh-~~p~v~~Av~~~l~~~~~~~-----~~~~~~~~~~l~~~La~ 149 (477)
|..|..+.+++|+||| .||++||||.++ ..+|| ++|++.+++.+++++..+.. ..+..+.+.++++++++
T Consensus 14 ~~~~~~~~~~~g~~~~-~~g~~~id~~~~---~~~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~ 89 (385)
T TIGR01825 14 YISIRVLESAQGPRVR-VNGKEVINLSSN---NYLGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAK 89 (385)
T ss_pred cccccccccCCCceEE-ECCceEEEeecc---CccCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHH
Confidence 3467889999999999 999999999875 34789 89999999999988643211 22346778999999999
Q ss_pred hCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCC
Q 011777 150 KMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSF 229 (477)
Q Consensus 150 ~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (477)
.++. +..++.+||++|+..+++... .+++.|++. ..+|+.........+ ......+ ..
T Consensus 90 ~~g~--~~~i~~~sG~~a~~~a~~~~~--~~gd~vi~~-~~~~~~~~~~~~~~g------------~~~~~~~-----~~ 147 (385)
T TIGR01825 90 FKKT--EAALVFQSGFNTNQGVLSALL--RKGDIVLSD-ELNHASIIDGLRLTK------------ATKKIYK-----HA 147 (385)
T ss_pred HhCC--CcEEEECcHHHHHHHHHHHhC--CCCCEEEEE-ccccHHHHHHHHhcC------------CceEEeC-----CC
Confidence 8764 345667788999998888653 345555554 455554433222221 1111110 01
Q ss_pred CCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccC--ccCCCCCCccc
Q 011777 230 GSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTG--FGRTGSHYWGF 307 (477)
Q Consensus 230 ~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g--fgr~G~~~~~~ 307 (477)
| .+++++.++.....++++|+++++++++|.+.+ +++|.++|++||+++|+||+|+. ++++| . ...
T Consensus 148 --d----~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~~----~~~i~~l~~~~~~~li~De~~~~~~~~~~~-~-~~~ 215 (385)
T TIGR01825 148 --D----MDDLDRVLRENPSYGKKLIVTDGVFSMDGDVAP----LPEIVELAERYGAVTYVDDAHGSGVMGEAG-R-GTV 215 (385)
T ss_pred --C----HHHHHHHHHhhccCCCeEEEEecCCcCCCCccC----HHHHHHHHHHhCCEEEEECcccccCcCCCC-C-ccH
Confidence 1 366777766332246789999999999997776 89999999999999999999964 34444 2 112
Q ss_pred cccCCCcc----eeeecccccCccceEEEEeCHHHHHhhccccc--ccCCCCcHHHHHHHHHHHHhhch-hhHHHHHHHH
Q 011777 308 ETQGVIPD----IVTMAKGIGNGLPLGAVVTTPEIANVMAQKIQ--FNTFGGNPVCSAGGLAVLRVIDK-ERRQAHCADV 380 (477)
Q Consensus 308 ~~~gv~pD----ivt~sK~lg~G~pig~v~~~~~~~~~~~~~~~--~~t~~~~~~~~aaa~a~l~~l~~-~~~~~~~~~~ 380 (477)
.++++.+| +.+|||++++ +.||+++++++++.+..... ..+...++..++++.++++.+.+ ++..+++.++
T Consensus 216 ~~~~~~~~~~i~~~s~sK~~~~--~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~ 293 (385)
T TIGR01825 216 HHFGLEDKVDIQVGTLSKAIGV--VGGYAAGHKELIEYLKNRARPFLFSTAQPPAVVAALAAAVDELQRSPELMERLWDN 293 (385)
T ss_pred hhcCCCcCCcEEEEeccHHhhc--CCCEEecCHHHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 23333333 4689999964 33899999999888764322 11223567888888899987643 4577888888
Q ss_pred HHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccC-----CCCCEEEEeCC
Q 011777 381 GSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGG-----LHGNVFRIKPP 455 (477)
Q Consensus 381 ~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~-----~~~~~iRi~p~ 455 (477)
++++.+.|.++ ..+. ....+.++++.+. .......+.+.|+++||++...+ ...+++|++|+
T Consensus 294 ~~~l~~~L~~~--g~~~---~~~~~~~~~~~~~--------~~~~~~~~~~~L~~~gi~v~~~~~~~~~~~~~~iRi~~~ 360 (385)
T TIGR01825 294 TRFFKAGLGKL--GYDT---GGSETPITPVVIG--------DEKAAQEFSRRLFDEGIFAQSIVFPTVPRGTARIRNIPT 360 (385)
T ss_pred HHHHHHHHHHc--CCCC---CCCCCCEEEEEEC--------CHHHHHHHHHHHHHCCcEEcccCCCCCCCCCceEEEEEc
Confidence 88898888775 2222 1233445555441 11234678889999999885321 12368999999
Q ss_pred CCCcHHHHHHHHHHHHHHHhh
Q 011777 456 MCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 456 ~~~t~e~i~~~l~~l~~~l~~ 476 (477)
+.++++++++++++|++++++
T Consensus 361 ~~~~~e~i~~~~~~l~~~~~~ 381 (385)
T TIGR01825 361 AEHTKDDLDQALDAYEKVGKE 381 (385)
T ss_pred CCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999998864
No 95
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.98 E-value=1.4e-29 Score=257.61 Aligned_cols=347 Identities=16% Similarity=0.162 Sum_probs=239.9
Q ss_pred ceeEEeeeccEEEeCCCCEEEeecCCcccccCCC-CCHHHHHHHHHHHhhcccccc-----ccCChHHHHHHHHHHhhCC
Q 011777 79 PLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGH-CHPDVLNAIFEQSKLLQHATT-----IYLHHAIADFAEALASKMP 152 (477)
Q Consensus 79 p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh-~~p~v~~Av~~~l~~~~~~~~-----~~~~~~~~~l~~~La~~~~ 152 (477)
+..+++++|.++||.+|+.||||.++. .+|| ++|++.+++.+++++..+... .+..+.+.+++++++++++
T Consensus 25 ~~~~~~~~~~~~~~~~g~~~i~l~~~~---~~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g 101 (397)
T PRK06939 25 ERVITSPQGADITVADGKEVINFCANN---YLGLANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFLG 101 (397)
T ss_pred cccccCCCCceEEecCCCeEEEeeccC---ccccCCCHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHHhC
Confidence 356789999999999999999998763 3678 689999999999876432211 2345678899999999986
Q ss_pred CCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCC
Q 011777 153 GNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSD 232 (477)
Q Consensus 153 ~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (477)
.+ +.+ ++++|++++..+++... .+++.|++.++.|++.......... ..+.++. . |
T Consensus 102 ~~-~~i-~~tsG~~a~~~~~~~l~--~~gd~vi~~~~~~~~~~~~~~~~~~-------------~~~~~~~------~-d 157 (397)
T PRK06939 102 TE-DAI-LYSSCFDANGGLFETLL--GKEDAIISDALNHASIIDGVRLCKA-------------KRYRYAN------N-D 157 (397)
T ss_pred CC-cEE-EEcChHHHHHHHHHHhC--CCCCEEEEEhhhhHHHHHHHHhcCC-------------ceEEeCC------C-C
Confidence 53 444 55556999999887653 3667888888888765443322211 1111111 1 1
Q ss_pred HHHHHHHHHHHHhcc--CCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCccc-Cc-cCCCCCCcccc
Q 011777 233 AARYAQDLQDHIDFG--TSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQT-GF-GRTGSHYWGFE 308 (477)
Q Consensus 233 ~~~~~~~le~~i~~~--~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~-gf-gr~G~~~~~~~ 308 (477)
.+++++.++.. ...++++|++++++++.|...+ +++|.++|++||++||+||+|+ |+ ++.| . ....
T Consensus 158 ----~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~----~~~l~~la~~~~~~li~De~~~~g~~~~~~-~-~~~~ 227 (397)
T PRK06939 158 ----MADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAP----LPEICDLADKYDALVMVDDSHAVGFVGENG-R-GTVE 227 (397)
T ss_pred ----HHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcCC----HHHHHHHHHHhCCEEEEECcccccCcCCCC-C-CHHH
Confidence 46777776531 1236788999889988886554 9999999999999999999995 33 3333 1 1223
Q ss_pred ccCC--Cccee--eecccccCccceEEEEeCHHHHHhhcccccccCC--CCcHHHHHHHHHHHHhhch-hhHHHHHHHHH
Q 011777 309 TQGV--IPDIV--TMAKGIGNGLPLGAVVTTPEIANVMAQKIQFNTF--GGNPVCSAGGLAVLRVIDK-ERRQAHCADVG 381 (477)
Q Consensus 309 ~~gv--~pDiv--t~sK~lg~G~pig~v~~~~~~~~~~~~~~~~~t~--~~~~~~~aaa~a~l~~l~~-~~~~~~~~~~~ 381 (477)
..++ .+|++ ++||++++ +++||+++++++++.+........+ +.++..++++.++++.+.+ +++.++++++.
T Consensus 228 ~~~~~~~~~i~~~S~sK~~~g-~r~G~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~ 306 (397)
T PRK06939 228 HFGVMDRVDIITGTLGKALGG-ASGGYTAGRKEVIDWLRQRSRPYLFSNSLAPAIVAASIKVLELLEESDELRDRLWENA 306 (397)
T ss_pred HcCCCCCCcEEEEECHHHhCc-cCceEEEeCHHHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 3344 35666 79999964 5899999999999887653222222 2346667777888887654 45677788888
Q ss_pred HHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccC-----CCCCEEEEeCCC
Q 011777 382 SHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGG-----LHGNVFRIKPPM 456 (477)
Q Consensus 382 ~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~-----~~~~~iRi~p~~ 456 (477)
+++++.|+++ +. ....+.+.++.+.+. ......++.+.|+++||.+.+.. ...+++|+++++
T Consensus 307 ~~l~~~L~~~----~~-~~~~~~~~~~~~~~~--------~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~~~~iRi~~~~ 373 (397)
T PRK06939 307 RYFREGMTAA----GF-TLGPGEHPIIPVMLG--------DAKLAQEFADRLLEEGVYVIGFSFPVVPKGQARIRTQMSA 373 (397)
T ss_pred HHHHHHHHHc----CC-CcCCCCCCEEEEEEC--------CHHHHHHHHHHHHHCCceEeeeCCCCCCCCCceEEEEECC
Confidence 8888887664 21 112345556554431 12235678899999999887531 123689999999
Q ss_pred CCcHHHHHHHHHHHHHHHhh
Q 011777 457 CFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 457 ~~t~e~i~~~l~~l~~~l~~ 476 (477)
.+++++|++++++|++++++
T Consensus 374 ~~~~~~i~~~l~~L~~~~~~ 393 (397)
T PRK06939 374 AHTKEQLDRAIDAFEKVGKE 393 (397)
T ss_pred CCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999998875
No 96
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.98 E-value=7.4e-30 Score=257.69 Aligned_cols=339 Identities=15% Similarity=0.165 Sum_probs=235.1
Q ss_pred EeecCCcccccCCC-CCHHHHHHHHHHHhhccccc--c--cc-CChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHH
Q 011777 99 LDAFAGIVTVSCGH-CHPDVLNAIFEQSKLLQHAT--T--IY-LHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAM 172 (477)
Q Consensus 99 lD~~~g~~~~~lGh-~~p~v~~Av~~~l~~~~~~~--~--~~-~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al 172 (477)
|||.++.+ ||. .||++++++.+++++....+ + .| ......+|+++++++++. +..++++||..|+..++
T Consensus 1 ~~f~s~dy---Lgl~~~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~g~--e~al~~~sG~~a~~~~i 75 (392)
T PLN03227 1 LNFATHDF---LSTSSSPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFLGT--ESAILYSDGASTTSSTV 75 (392)
T ss_pred CCCcCcCc---cCCCCCHHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHhCC--CcEEEecCcHHHHHHHH
Confidence 35555443 444 58999999999998733111 1 12 245688999999999965 46778888888888777
Q ss_pred HHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhcc-----
Q 011777 173 LMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFG----- 247 (477)
Q Consensus 173 ~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~----- 247 (477)
... ..+++.|++.++.|.....+. .+... .+..+ +++ | .+++++.++..
T Consensus 76 ~~l--~~~GD~Vl~~~~~h~s~~~~~-~l~~~----------~~~~~--------~~~-d----~~~l~~~~~~i~~~~~ 129 (392)
T PLN03227 76 AAF--AKRGDLLVVDRGVNEALLVGV-SLSRA----------NVRWF--------RHN-D----MKDLRRVLEQVRAQDV 129 (392)
T ss_pred HHh--CCCCCEEEEeccccHHHHHHH-HHcCC----------eEEEe--------CCC-C----HHHHHHHHHHhhhhcc
Confidence 653 345677777776665443322 11110 11111 111 1 23344333211
Q ss_pred -----CCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCccc--CccCCCCCCccccccCCCc----ce
Q 011777 248 -----TSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQT--GFGRTGSHYWGFETQGVIP----DI 316 (477)
Q Consensus 248 -----~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~--gfgr~G~~~~~~~~~gv~p----Di 316 (477)
...++..|++||+++++|.+.+ +++|+++|++||+++|+||+|+ .+|++| . +..+++|+.| |+
T Consensus 130 a~~~~~~~~t~~vi~E~v~~~~G~i~~----l~~i~~l~~~~g~~livDe~~~~g~~g~~G-~-g~~~~~g~~p~~~~Di 203 (392)
T PLN03227 130 ALKRKPTDQRRFLVVEGLYKNTGTLAP----LKELVALKEEFHYRLILDESFSFGTLGKSG-R-GSLEHAGLKPMVHAEI 203 (392)
T ss_pred ccccccCCCcEEEEEcCCcCCCCcccC----HHHHHHHHHHcCCEEEEECcccccccCCCC-C-cHHHHcCCCCCCCceE
Confidence 1135789999999999998887 9999999999999999999997 345555 3 5678899998 99
Q ss_pred eeecccccCccceEEEEeCHHHHHhhcccccccCCCCc--HHHHHHHHHHHHh-hchhhHHHHHHHHHHHHHHHHHHHHH
Q 011777 317 VTMAKGIGNGLPLGAVVTTPEIANVMAQKIQFNTFGGN--PVCSAGGLAVLRV-IDKERRQAHCADVGSHLLGRLRTLQE 393 (477)
Q Consensus 317 vt~sK~lg~G~pig~v~~~~~~~~~~~~~~~~~t~~~~--~~~~aaa~a~l~~-l~~~~~~~~~~~~~~~l~~~L~~l~~ 393 (477)
+++|++-+.|++.|++++++++++.+....+..+|+++ |+.++|++++++. ++.+++.+++++++++++++|++ .
T Consensus 204 v~~slsk~~g~~gg~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~aa~~al~~~~~~~~~~~~l~~~~~~l~~~L~~--~ 281 (392)
T PLN03227 204 VTFSLENAFGSVGGMTVGSEEVVDHQRLSGSGYCFSASAPPFLAKADATATAGELAGPQLLNRLHDSIANLYSTLTN--S 281 (392)
T ss_pred EEeechhhhhccCcEEecCHHHHHHHHHhCcCccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHh--c
Confidence 98764433345558888999998877666677788876 8788888877755 45567899999999999999987 3
Q ss_pred hCCCceeeecc--------ceeEEEEEeeCCCCCCc-cHHHHHHHHHHHHHcCceeeccC---------CCCCEEEEeCC
Q 011777 394 RHDIIGDVRGR--------GLMVGMELVTDRKEKTP-AKAETAVLFEKLRELGVLVGKGG---------LHGNVFRIKPP 455 (477)
Q Consensus 394 ~~~~~~~v~g~--------g~~~~i~~~~~~~~~~~-~~~~~~~~~~~l~~~Gv~v~~~~---------~~~~~iRi~p~ 455 (477)
.++.+.++|+. |+++++++.++...+.+ .......+.+.|+++|+++.+.+ .....+|++.+
T Consensus 282 ~~~~~~~~rg~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~~~~~~~~P~~~iR~~~~ 361 (392)
T PLN03227 282 SHPYALKLRNRLVITSDPISPIIYLRLSDQEATRRTDETLILDQIAHHSLSEGVAVVSTGGHVKKFLQLVPPPCLRVVAN 361 (392)
T ss_pred CCccccccccccccCCCCCCCEEEEEeCCHHHhhhhhhhhHHHHHHHHHHHCCCEEEecccccCCcCCCCCCceEEEEec
Confidence 56667777763 55788888432111101 11123578899999999986422 11356899999
Q ss_pred CCCcHHHHHHHHHHHHHHHhh
Q 011777 456 MCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 456 ~~~t~e~i~~~l~~l~~~l~~ 476 (477)
..+|+|||++++++|++++++
T Consensus 362 ~~~t~eei~~~~~~l~~~~~~ 382 (392)
T PLN03227 362 ASHTREDIDKLLTVLGEAVEA 382 (392)
T ss_pred CCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999865
No 97
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.97 E-value=5.1e-29 Score=253.08 Aligned_cols=351 Identities=16% Similarity=0.151 Sum_probs=242.4
Q ss_pred ccCceeEEeeeccEEEeCCCCEEEeecCCcccccCCCC-CHHHHHHHHHHHhhcc--ccccc---cCChHHHHHHHHHHh
Q 011777 76 YQKPLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHC-HPDVLNAIFEQSKLLQ--HATTI---YLHHAIADFAEALAS 149 (477)
Q Consensus 76 ~~~p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~-~p~v~~Av~~~l~~~~--~~~~~---~~~~~~~~l~~~La~ 149 (477)
++.|..+.++.|.++++.+|++||||.++. .||++ +|++++++.+++.+.. +..+. +..+...++++.+++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~---~lg~~~~~~v~~~~~~~~~~~~~~~~~s~~~~G~~~~~~~le~~ia~ 94 (393)
T TIGR01822 18 FKSERIITSPQGADIRVADGREVLNFCANN---YLGLSSHPDLIQAAKDALDEHGFGMSSVRFICGTQDIHKELEAKIAA 94 (393)
T ss_pred CCcccccccCCCceEEecCCceEEEeeCCC---ccccCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHH
Confidence 345677888999999999999999999885 46776 8999999999998732 12222 235567899999999
Q ss_pred hCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCC
Q 011777 150 KMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSF 229 (477)
Q Consensus 150 ~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (477)
+++. +.+++++||++|+..++... ..+++.|++.++.|+....+...... . ++. . + .
T Consensus 95 ~~g~--~~~ii~~~~~~a~~~~~~~l--~~~gd~vi~~~~~~~s~~~~~~~~~~-~---------~~~-~--~------~ 151 (393)
T TIGR01822 95 FLGT--EDTILYASCFDANGGLFETL--LGAEDAIISDALNHASIIDGVRLCKA-K---------RYR-Y--A------N 151 (393)
T ss_pred HhCC--CcEEEECchHHHHHHHHHHh--CCCCCEEEEeccccHHHHHHHHhcCC-c---------eEE-e--C------C
Confidence 9965 45777799999999877654 24567788877777654433222111 1 110 0 0 0
Q ss_pred CCCHHHHHHHHHHHHhcc--CCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCC-cc
Q 011777 230 GSDAARYAQDLQDHIDFG--TSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHY-WG 306 (477)
Q Consensus 230 ~~~~~~~~~~le~~i~~~--~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~-~~ 306 (477)
.| .+++++.++.. ...++++|+++++++++|.+.+ +++|.++|++||++||+||+|. +|..|... ..
T Consensus 152 -~d----~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~----l~~i~~la~~~~~~li~De~~~-~g~~~~~~~~~ 221 (393)
T TIGR01822 152 -ND----MADLEAQLKEARAAGARHRLIATDGVFSMDGVIAP----LDEICDLADKYDALVMVDECHA-TGFLGPTGRGS 221 (393)
T ss_pred -CC----HHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCC----HHHHHHHHHHcCCEEEEECCcc-ccCcCCCCCch
Confidence 11 47777777632 1226789999999999998776 9999999999999999999994 43322110 11
Q ss_pred ccccCC--Cccee--eecccccCccceEEEEeCHHHHHhhcccccccCCC--CcHHHHHHHHHHHHhhch-hhHHHHHHH
Q 011777 307 FETQGV--IPDIV--TMAKGIGNGLPLGAVVTTPEIANVMAQKIQFNTFG--GNPVCSAGGLAVLRVIDK-ERRQAHCAD 379 (477)
Q Consensus 307 ~~~~gv--~pDiv--t~sK~lg~G~pig~v~~~~~~~~~~~~~~~~~t~~--~~~~~~aaa~a~l~~l~~-~~~~~~~~~ 379 (477)
.+..++ .+|++ ++||+++ |+++||+++++++++.+........++ .++..+++++++++.++. ++..+++++
T Consensus 222 ~~~~~~~~~~di~~~s~sK~l~-g~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~ 300 (393)
T TIGR01822 222 HELCGVMGRVDIITGTLGKALG-GASGGFTTARKEVVELLRQRSRPYLFSNSLPPAVVGASIKVLEMLEASNELRDRLWA 300 (393)
T ss_pred HHhcCCCCCCeEEEEEChHHhh-CCCcEEEEeCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 123333 35666 6899987 478999999999998876532222232 356667778888887643 457788888
Q ss_pred HHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccC-----CCCCEEEEeC
Q 011777 380 VGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGG-----LHGNVFRIKP 454 (477)
Q Consensus 380 ~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~-----~~~~~iRi~p 454 (477)
+.+++++.|+++ .... ..+.+.++.+.+. ......++.+.|+++||.+.... .....+|+++
T Consensus 301 ~~~~l~~~L~~~--g~~~---~~~~~~~~~i~~~--------~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~iRis~ 367 (393)
T TIGR01822 301 NTRYFRERMEAA--GFDI---KPADHPIIPVMLY--------DAVLAQRFARRLLEEGIYVTGFFYPVVPKGQARIRVQI 367 (393)
T ss_pred HHHHHHHHHHHc--CCCC---CCCCCCEEEEEeC--------CHHHHHHHHHHHHHCCeeEeeeCCCCCCCCCceEEEEE
Confidence 888888888764 2221 1223455555442 12345678889999999886321 1124799999
Q ss_pred CCCCcHHHHHHHHHHHHHHHhh
Q 011777 455 PMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 455 ~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
+..+|++||++++++|++++++
T Consensus 368 ~~~~t~edi~~~~~~l~~~~~~ 389 (393)
T TIGR01822 368 SAAHTEEQLDRAVEAFTRIGRE 389 (393)
T ss_pred CCCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998764
No 98
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.97 E-value=1.5e-28 Score=246.55 Aligned_cols=337 Identities=18% Similarity=0.194 Sum_probs=229.6
Q ss_pred EeeeccEEEeCCCCEEEeecCCcccccCCC-CCHHHHHHHHHHHhhcccccc-----ccCChHHHHHHHHHHhhCCCCCC
Q 011777 83 VEGKMQYLFDENGRRYLDAFAGIVTVSCGH-CHPDVLNAIFEQSKLLQHATT-----IYLHHAIADFAEALASKMPGNLK 156 (477)
Q Consensus 83 ~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh-~~p~v~~Av~~~l~~~~~~~~-----~~~~~~~~~l~~~La~~~~~~~~ 156 (477)
.++.|.++. .+|++||||.+| .++|| +||+|++++.+++++...... .+..+...++++.|+++++. +
T Consensus 4 ~~~~~~~~~-~~g~~~id~~~~---~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~--~ 77 (360)
T TIGR00858 4 DRGPGPEVV-RDGRRLLNFSSN---DYLGLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKGT--E 77 (360)
T ss_pred ccCCCCeEE-ECCceEEecccC---CcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCC--C
Confidence 477899997 899999999997 46896 789999999999976332111 12246678899999998863 3
Q ss_pred EEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHH
Q 011777 157 VVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARY 236 (477)
Q Consensus 157 ~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (477)
..+++++|++++..+++.+. .+++.|++.++.|..... .....+. .+..++.+ |
T Consensus 78 ~~i~~~~G~~~~~~~l~~~~--~~gd~v~~~~~~~~~~~~-~~~~~g~----------~~~~~~~~---------d---- 131 (360)
T TIGR00858 78 AALLFSSGYLANVGVISALV--GKGDLILSDALNHASLID-GCRLSGA----------RVRRYRHN---------D---- 131 (360)
T ss_pred CEEEECchHHHHHHHHHHhC--CCCCEEEEEccccHHHHH-HHHhcCC----------ceEEecCC---------C----
Confidence 45566677899888776542 355667766655543322 2222111 11111111 1
Q ss_pred HHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCC-CccccccCCCcc
Q 011777 237 AQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSH-YWGFETQGVIPD 315 (477)
Q Consensus 237 ~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~-~~~~~~~gv~pD 315 (477)
.+++++.++.....++++|+++++++++|.+.+ +++|.++|++||+++|+||+|+ ++..+.. ......+++.++
T Consensus 132 ~~~l~~~~~~~~~~~~~~v~~~~~~~~~G~~~~----~~~i~~l~~~~~~~li~De~~~-~~~~~~~~~~~~~~~~~~~~ 206 (360)
T TIGR00858 132 VEHLERLLEKNRGERRKLIVTDGVFSMDGDIAP----LPQLVALAERYGAWLMVDDAHG-TGVLGEDGRGTLEHFGLKPE 206 (360)
T ss_pred HHHHHHHHHHcccCCCeEEEEeCCccCCCCCcC----HHHHHHHHHHcCcEEEEECccc-ccCcCCCCCchHHhcCCCcc
Confidence 477888776322135788999998888887666 8999999999999999999997 3332211 111233444443
Q ss_pred -----eeeecccccCccceEEEEeCHHHHHhhcccc--cccCCCCcHHHHHHHHHHHHhhch-hhHHHHHHHHHHHHHHH
Q 011777 316 -----IVTMAKGIGNGLPLGAVVTTPEIANVMAQKI--QFNTFGGNPVCSAGGLAVLRVIDK-ERRQAHCADVGSHLLGR 387 (477)
Q Consensus 316 -----ivt~sK~lg~G~pig~v~~~~~~~~~~~~~~--~~~t~~~~~~~~aaa~a~l~~l~~-~~~~~~~~~~~~~l~~~ 387 (477)
+.++||++++ +.||+++++++++.+.... +..+.+.++..++++.++++.+.. ++..+++.++.+++.+.
T Consensus 207 ~~~i~i~s~sK~~~~--~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~ 284 (360)
T TIGR00858 207 PVDIQVGTLSKALGS--YGAYVAGSQALIDYLINRARTLIFSTALPPAVAAAALAALELIQEEPWRREKLLALIARLRAG 284 (360)
T ss_pred CCcEEEEechhhhhc--cCcEEEcCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHH
Confidence 5589999986 2289999999888775432 222334667778888888886654 35678888888888888
Q ss_pred HHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCC-----CCCEEEEeCCCCCcHHH
Q 011777 388 LRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGL-----HGNVFRIKPPMCFTKDD 462 (477)
Q Consensus 388 L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~-----~~~~iRi~p~~~~t~e~ 462 (477)
|.++ +. ......|.++++.+. ......++.+.|+++||++.++.. .++++|++++..++++|
T Consensus 285 L~~~----~~-~~~~~~~~~~~~~~~--------~~~~~~~~~~~l~~~gI~v~~~~~~~~~~~~~~iRis~~~~~~~~~ 351 (360)
T TIGR00858 285 LEAL----GF-TLMPSCTPIVPVIIG--------DNASALALAEELQQQGIFVGAIRPPTVPAGTSRLRLTLSAAHTPGD 351 (360)
T ss_pred HHHc----CC-ccCCCCCCEEEEEeC--------CHHHHHHHHHHHHHCCeeEeeeCCCCCCCCCceEEEEEcCCCCHHH
Confidence 8764 21 112345778887762 122356788999999999975421 13689999999999999
Q ss_pred HHHHHHHHH
Q 011777 463 ADFLVDALD 471 (477)
Q Consensus 463 i~~~l~~l~ 471 (477)
+++++++|+
T Consensus 352 i~~~l~~l~ 360 (360)
T TIGR00858 352 IDRLAEALK 360 (360)
T ss_pred HHHHHHhhC
Confidence 999999873
No 99
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.97 E-value=1.7e-28 Score=246.43 Aligned_cols=340 Identities=16% Similarity=0.133 Sum_probs=234.4
Q ss_pred CEEEeecCCcccccCCCCCHHHHHHHHHHHhhcc--ccccccCChHHHHHHHHHHhhCC--CCCC-EEEEeCChHHHHHH
Q 011777 96 RRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQ--HATTIYLHHAIADFAEALASKMP--GNLK-VVYFVNSGTEANEL 170 (477)
Q Consensus 96 ~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~--~~~~~~~~~~~~~l~~~La~~~~--~~~~-~v~~~~sGseA~~~ 170 (477)
...||+..|.+.. ..++.+++++.+++.... ++...+..+.++.+++++.+..+ ...+ .|++|+|++||+..
T Consensus 28 ~~vi~l~iG~Pd~---~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~~ 104 (393)
T COG0436 28 EDVIDLSIGEPDF---PTPEHIIEAAIEALEEGGTHYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALFL 104 (393)
T ss_pred CCEEEeCCCCCCC---CCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHHH
Confidence 4678887776522 357889999999998763 33344556667777777777754 2333 49999999999999
Q ss_pred HHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcC-CCCCCCHHHHHHHHHHHHhccCC
Q 011777 171 AMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYH-GSFGSDAARYAQDLQDHIDFGTS 249 (477)
Q Consensus 171 Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~le~~i~~~~~ 249 (477)
++..... +++.||+++|+|..+.......++.. +.++.... ..|.-| .++|++.++
T Consensus 105 ~~~a~~~--pGDeVlip~P~Y~~y~~~~~~~gg~~-------------v~v~l~~~~~~f~~d----~~~l~~~i~---- 161 (393)
T COG0436 105 AFLALLN--PGDEVLIPDPGYPSYEAAVKLAGGKP-------------VPVPLDEEENGFKPD----LEDLEAAIT---- 161 (393)
T ss_pred HHHHhcC--CCCEEEEeCCCCcCHHHHHHhcCCEE-------------EEEeCCcCccCCcCC----HHHHHhhcC----
Confidence 9986644 67889999999988766655554422 12111000 122222 478888876
Q ss_pred CCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCc-cccccC---CCcceeeecccccC
Q 011777 250 GKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYW-GFETQG---VIPDIVTMAKGIGN 325 (477)
Q Consensus 250 ~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~-~~~~~g---v~pDivt~sK~lg~ 325 (477)
+++++|+++..+|++| .+.++++|++|.++|++||++||+||+|.+|.+.|..+. ..+..+ ...-+-+|||.++.
T Consensus 162 ~ktk~i~ln~P~NPTG-av~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~m 240 (393)
T COG0436 162 PKTKAIILNSPNNPTG-AVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGM 240 (393)
T ss_pred ccceEEEEeCCCCCcC-cCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEecccccccc
Confidence 3677777766666666 567999999999999999999999999999988873122 222222 12234479999995
Q ss_pred -ccceEEEEeC-HHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHH----HHHHHHHHHHHHHHHHHHhCCCce
Q 011777 326 -GLPLGAVVTT-PEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQA----HCADVGSHLLGRLRTLQERHDIIG 399 (477)
Q Consensus 326 -G~pig~v~~~-~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~----~~~~~~~~l~~~L~~l~~~~~~~~ 399 (477)
|||+||++++ +++++.+.......+++.+.++|.|+.++|+.-++.+..+ .++++++.+.+.|++ .+.+.
T Consensus 241 tGwRvG~~v~~~~~l~~~~~~~~~~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~----~~g~~ 316 (393)
T COG0436 241 TGWRIGWVVGPPEELIAALRKLKSYLTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNE----IGGLS 316 (393)
T ss_pred cccceeEeecChHHHHHHHHHHHHhcccCCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHh----cCCee
Confidence 9999999999 8888888766666778999999999999998642222333 344455555555444 34344
Q ss_pred eee-ccceeE-EEEEeeCCCCCCccHHHHHHHHHHHHH-cCceeeccCCCC-----CEEEEeCCCCCcHHHHHHHHHHHH
Q 011777 400 DVR-GRGLMV-GMELVTDRKEKTPAKAETAVLFEKLRE-LGVLVGKGGLHG-----NVFRIKPPMCFTKDDADFLVDALD 471 (477)
Q Consensus 400 ~v~-g~g~~~-~i~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~~~~-----~~iRi~p~~~~t~e~i~~~l~~l~ 471 (477)
... ..|.|+ ++++... ....+++..|++ .||.+.||..++ +++||+ +..++++++++++++.
T Consensus 317 ~~~~p~Ga~Y~~~~i~~~--------~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis--~~~~~~~l~~a~~rl~ 386 (393)
T COG0436 317 VVKPPEGAFYLFPKIPEL--------LDSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLS--LATSEETLEEALRRLA 386 (393)
T ss_pred eccCCCeeEEEEeecCCC--------CCHHHHHHHHHHhCCEEEecccccCCCCCCCeEEEE--EecCHHHHHHHHHHHH
Confidence 444 556655 4444211 123456665554 589999985544 579994 7778899999999999
Q ss_pred HHHhh
Q 011777 472 YSMSK 476 (477)
Q Consensus 472 ~~l~~ 476 (477)
+.+..
T Consensus 387 ~~~~~ 391 (393)
T COG0436 387 RFLAE 391 (393)
T ss_pred HHHHh
Confidence 98864
No 100
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.97 E-value=2.8e-28 Score=248.77 Aligned_cols=333 Identities=19% Similarity=0.230 Sum_probs=228.9
Q ss_pred CCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccc----ccc-CChHHHHHHHHHHhhCCCCCCEEEEeCChHHHH
Q 011777 94 NGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHAT----TIY-LHHAIADFAEALASKMPGNLKVVYFVNSGTEAN 168 (477)
Q Consensus 94 dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~----~~~-~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~ 168 (477)
+|+++++|.++.+ ++|| +||+|++++.++++++.+.. ..+ ..+...+|+++|+++++. +..++++||++||
T Consensus 44 ~~~~~~~~~sn~y-l~l~-~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~g~--~~~i~~~sG~~a~ 119 (410)
T PRK13392 44 GPRRVTIWCSNDY-LGMG-QHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHGK--ESALLFTSGYVSN 119 (410)
T ss_pred CCceEEEEECCCc-cCCC-CCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHhCC--CCEEEECcHHHHH
Confidence 5789999988654 3454 58999999999998754321 112 234678999999999974 4567778899999
Q ss_pred HHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccC
Q 011777 169 ELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGT 248 (477)
Q Consensus 169 ~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~ 248 (477)
+.+++......++ .+|+.+..+|+.........+.. +..+ + .+ | .+++++.++...
T Consensus 120 ~~~i~~l~~~~~g-~~vi~~~~~h~s~~~~~~~~g~~----------~~~~--~------~~-d----~~~l~~~l~~~~ 175 (410)
T PRK13392 120 DAALSTLGKLLPG-CVILSDALNHASMIEGIRRSGAE----------KQVF--R------HN-D----LADLEEQLASVD 175 (410)
T ss_pred HHHHHHHhcCCCC-CEEEEehhhhHHHHHHHHHcCCe----------EEEE--e------CC-C----HHHHHHHHHhcc
Confidence 9999844221223 45566666887654433332211 1111 1 11 1 245666665333
Q ss_pred CCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCccc-Cc-cCCCCCCccccccCC--Cccee--eeccc
Q 011777 249 SGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQT-GF-GRTGSHYWGFETQGV--IPDIV--TMAKG 322 (477)
Q Consensus 249 ~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~-gf-gr~G~~~~~~~~~gv--~pDiv--t~sK~ 322 (477)
.+++++|+++++++++|.+.+ +++|.++|++||+++|+||+|+ |+ |..| ..+ .++.++ .+|++ +|||+
T Consensus 176 ~~~t~~v~i~~~~n~tG~~~~----l~~i~~l~~~~~~~livDea~~~g~~g~~g-~g~-~~~~~~~~~~div~~tlsK~ 249 (410)
T PRK13392 176 PDRPKLIAFESVYSMDGDIAP----IEAICDLADRYNALTYVDEVHAVGLYGARG-GGI-AERDGLMDRIDMIQGTLAKA 249 (410)
T ss_pred CCCCEEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEECCccccCcCCCC-Cch-hhhccCCCCCcEEEEEChHh
Confidence 356789999999999998877 9999999999999999999998 43 5555 222 233343 45766 89999
Q ss_pred ccC-ccceEEEEeCHHHHHhhccccc--ccCCCCcHHHHHHHHHHHHhhchh-hHHHHHHHHHHHHHHHHHHHHHhCCCc
Q 011777 323 IGN-GLPLGAVVTTPEIANVMAQKIQ--FNTFGGNPVCSAGGLAVLRVIDKE-RRQAHCADVGSHLLGRLRTLQERHDII 398 (477)
Q Consensus 323 lg~-G~pig~v~~~~~~~~~~~~~~~--~~t~~~~~~~~aaa~a~l~~l~~~-~~~~~~~~~~~~l~~~L~~l~~~~~~~ 398 (477)
+|. | ||+++++++++.+..... ..+.+.+|++++++.++|+.++.. ...+++.++.+++++.|+++ ....
T Consensus 250 ~g~~G---G~~~~~~~~~~~l~~~~~~~~~s~~~~~~~~~a~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~- 323 (410)
T PRK13392 250 FGCLG---GYIAASADLIDFVRSFAPGFIFTTALPPAVAAGATAAIRHLKTSQTERDAHQDRVAALKAKLNAN--GIPV- 323 (410)
T ss_pred hhccc---chhhcCHHHHHHHHHhCcchhccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc--CCCC-
Confidence 984 5 888899999887765432 234556788899999999877543 34466677778888877764 2221
Q ss_pred eeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHH-HcCceeeccCC-----CCCEEEEeCCCCCcHHHHHHHHHHHHH
Q 011777 399 GDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLR-ELGVLVGKGGL-----HGNVFRIKPPMCFTKDDADFLVDALDY 472 (477)
Q Consensus 399 ~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~-----~~~~iRi~p~~~~t~e~i~~~l~~l~~ 472 (477)
.++.+.++.+.+. ......++.+.|+ ++||++.+... ...++|++++..+|++|+++++++|++
T Consensus 324 --~~~~~~~~~i~~~--------~~~~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lRis~~~~~t~edid~l~~aL~~ 393 (410)
T PRK13392 324 --MPSPSHIVPVMVG--------DPTLCKAISDRLMSEHGIYIQPINYPTVPRGTERLRITPTPLHDDEDIDALVAALVA 393 (410)
T ss_pred --CCCCCCEEEEEeC--------CHHHHHHHHHHHHHhCCEEEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHH
Confidence 2345666655542 1123457888886 67999986421 236899999999999999999999999
Q ss_pred HHhh
Q 011777 473 SMSK 476 (477)
Q Consensus 473 ~l~~ 476 (477)
++++
T Consensus 394 ~~~~ 397 (410)
T PRK13392 394 IWDR 397 (410)
T ss_pred HHHH
Confidence 8765
No 101
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.97 E-value=4e-27 Score=236.97 Aligned_cols=329 Identities=16% Similarity=0.115 Sum_probs=233.6
Q ss_pred CCCEEEeecCCcccccCCC-CCHHHHHHHHHHHhhcccccc-----ccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHH
Q 011777 94 NGRRYLDAFAGIVTVSCGH-CHPDVLNAIFEQSKLLQHATT-----IYLHHAIADFAEALASKMPGNLKVVYFVNSGTEA 167 (477)
Q Consensus 94 dG~~ylD~~~g~~~~~lGh-~~p~v~~Av~~~l~~~~~~~~-----~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA 167 (477)
.++++|||.++.+ ||. .||+|++++.+.++++..... .+......+|.++|+++++ .+.+++++||..|
T Consensus 100 ~~r~~l~FsSndY---LGL~~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~g--~e~all~sSGy~A 174 (476)
T PLN02955 100 RFKKLLLFSGNDY---LGLSSHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLKK--KEDCLVCPTGFAA 174 (476)
T ss_pred CCceEEEeeccCc---cCCCCCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHHC--CCcEEEECChHHH
Confidence 4579999988765 664 599999999999998643221 2345678899999999994 4679999999999
Q ss_pred HHHHHHHHHh-----------ccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHH
Q 011777 168 NELAMLMARL-----------STGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARY 236 (477)
Q Consensus 168 ~~~Al~~ar~-----------~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (477)
|..++..... ..+++.+|+.+...|........+.... .+..... .++++
T Consensus 175 N~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~--------~~a~~~~------f~HND----- 235 (476)
T PLN02955 175 NMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQ--------GNVEVFV------YRHCD----- 235 (476)
T ss_pred HHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhcccc--------CCceEEE------eCCCC-----
Confidence 9999975421 0245667888888898766555443110 0111111 12222
Q ss_pred HHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCc--cCCCCCCccccccCCCc
Q 011777 237 AQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGF--GRTGSHYWGFETQGVIP 314 (477)
Q Consensus 237 ~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gf--gr~G~~~~~~~~~gv~p 314 (477)
+++|+++++... ++.+.|++|++.++.|.+.| |++|.++|++||++||+||+++.+ |.+| ....+++++.+
T Consensus 236 ~~~Le~~L~~~~-~~~~~Vv~EgV~SmdGdiap----L~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G--~G~~e~~g~~~ 308 (476)
T PLN02955 236 MYHLNSLLSSCK-MKRKVVVTDSLFSMDGDFAP----MEELSQLRKKYGFLLVIDDAHGTFVCGENG--GGVAEEFNCEA 308 (476)
T ss_pred HHHHHHHHHhCC-CCceEEEEeCCCCCCCCcCC----HHHHHHHHHHcCcEEEEcccccCceecCCC--CcHHHHhCCCC
Confidence 588988887443 35588999999999999888 999999999999999999999733 4444 22346777766
Q ss_pred ce----eeecccccC-ccceEEEEeCHHHHHhhcccccccCC--CCcHHHHHHHHHHHHhhch-hhHHHHHHHHHHHHHH
Q 011777 315 DI----VTMAKGIGN-GLPLGAVVTTPEIANVMAQKIQFNTF--GGNPVCSAGGLAVLRVIDK-ERRQAHCADVGSHLLG 386 (477)
Q Consensus 315 Di----vt~sK~lg~-G~pig~v~~~~~~~~~~~~~~~~~t~--~~~~~~~aaa~a~l~~l~~-~~~~~~~~~~~~~l~~ 386 (477)
|+ .||||++|. | |++++++++++.+........| +.+|...++++++++++.. +...+++.++.+++++
T Consensus 309 di~ii~~TLsKA~G~~G---Gfi~gs~~~~~~l~~~~~~~ifStalpp~~aaa~laal~l~~~~~~~r~~L~~n~~~fr~ 385 (476)
T PLN02955 309 DVDLCVGTLSKAAGCHG---GFIACSKKWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARKEKWRRKAIWERVKEFKA 385 (476)
T ss_pred CCcEEEEeCccchhccC---ceeecHHHHHHHHHHhCCCCeecccccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 65 589999983 4 7899999999888754333333 3446667778888988754 3455667777776665
Q ss_pred HHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccC-----CCCCEEEEeCCCCCcHH
Q 011777 387 RLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGG-----LHGNVFRIKPPMCFTKD 461 (477)
Q Consensus 387 ~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~-----~~~~~iRi~p~~~~t~e 461 (477)
.+ .++. ...++.+.+. +...+..+.+.|+++||++.+.. .....+||+.+..||++
T Consensus 386 ~~-----G~~~------~sPI~pI~ig--------~~~~a~~~~~~L~~~Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~e 446 (476)
T PLN02955 386 LS-----GVDI------SSPIISLVVG--------NQEKALKASRYLLKSGFHVMAIRPPTVPPNSCRLRVTLSAAHTTE 446 (476)
T ss_pred hc-----CCCC------CCCEEEEEeC--------CHHHHHHHHHHHHHCCCEEEEECCCCCCCCCceEEEeeCCCCCHH
Confidence 21 1111 2445555552 33456778999999999986541 12357999999999999
Q ss_pred HHHHHHHHHHHHHh
Q 011777 462 DADFLVDALDYSMS 475 (477)
Q Consensus 462 ~i~~~l~~l~~~l~ 475 (477)
||+.+++.|.+++.
T Consensus 447 dId~lv~~L~~~~~ 460 (476)
T PLN02955 447 DVKKLITALSSCLD 460 (476)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999988764
No 102
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.96 E-value=1.7e-27 Score=234.39 Aligned_cols=329 Identities=19% Similarity=0.256 Sum_probs=245.4
Q ss_pred CCCCEEEeecCCcccccCCC-CCHHHHHHHHHHHhhccccc-----cccCChHHHHHHHHHHhhCCCCCCEEEEeCChHH
Q 011777 93 ENGRRYLDAFAGIVTVSCGH-CHPDVLNAIFEQSKLLQHAT-----TIYLHHAIADFAEALASKMPGNLKVVYFVNSGTE 166 (477)
Q Consensus 93 ~dG~~ylD~~~g~~~~~lGh-~~p~v~~Av~~~l~~~~~~~-----~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGse 166 (477)
.+|++++||+++.+ ||. .||++++++.+.+++..... ..+.++...+|.++|+++++ .+..++.+||-.
T Consensus 36 ~~~~~~~nf~SNdY---LGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~g--~e~al~f~SGy~ 110 (388)
T COG0156 36 ADGRKVLNFCSNDY---LGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFLG--AEAALLFSSGFV 110 (388)
T ss_pred cCCceeEeeeccCc---ccccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHhC--CCcEEEEcccch
Confidence 45999999999886 676 59999999999999843211 13567889999999999995 478999999999
Q ss_pred HHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhc
Q 011777 167 ANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDF 246 (477)
Q Consensus 167 A~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~ 246 (477)
||..++... .+++.+|+.+--.|.+......++......+. .+ | +++||+.++.
T Consensus 111 AN~~~i~~l---~~~~dli~~D~lnHASiidG~rls~a~~~~f~------------------Hn-D----~~~Le~~l~~ 164 (388)
T COG0156 111 ANLGLLSAL---LKKGDLIFSDELNHASIIDGIRLSRAEVRRFK------------------HN-D----LDHLEALLEE 164 (388)
T ss_pred hHHHHHHHh---cCCCcEEEEechhhhhHHHHHHhCCCcEEEec------------------CC-C----HHHHHHHHHh
Confidence 999988744 35678888888889886666665543322211 11 1 5889999875
Q ss_pred cCCC--CeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCcc-ccccCCCcc---e--ee
Q 011777 247 GTSG--KVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWG-FETQGVIPD---I--VT 318 (477)
Q Consensus 247 ~~~~--~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~-~~~~gv~pD---i--vt 318 (477)
.... +...|++|.+.++.|.+.| |++|.++++|||++|++||+|+ +|-.|...-+ .+++|+.++ + .|
T Consensus 165 ~~~~~~~~~~IvtegVfSMdGdiAp----L~~l~~L~~ky~a~L~VDEAHa-~Gv~G~~GrG~~e~~g~~~~~vdi~~gT 239 (388)
T COG0156 165 ARENGARRKLIVTEGVFSMDGDIAP----LPELVELAEKYGALLYVDEAHA-VGVLGPNGRGLAEHFGLEPEEVDIIVGT 239 (388)
T ss_pred hhccCCCceEEEEeccccCCCCcCC----HHHHHHHHHHhCcEEEEEcccc-ccccCCCCccHHHHhCCCCccceEEEEE
Confidence 2211 4689999999999999999 9999999999999999999997 5544422222 367777643 3 37
Q ss_pred ecccccC-ccceEEEEeCHHHHHhhcccccc--cCCCCcHHHHHHHHHHHHhhch-hhHHHHHHHHHHHHHHHHHHHHHh
Q 011777 319 MAKGIGN-GLPLGAVVTTPEIANVMAQKIQF--NTFGGNPVCSAGGLAVLRVIDK-ERRQAHCADVGSHLLGRLRTLQER 394 (477)
Q Consensus 319 ~sK~lg~-G~pig~v~~~~~~~~~~~~~~~~--~t~~~~~~~~aaa~a~l~~l~~-~~~~~~~~~~~~~l~~~L~~l~~~ 394 (477)
|||++|+ | |++.++..+.+.+...... .+-+.+|..++++.++|+++++ .+..++++++..++++.++..
T Consensus 240 lsKAlGs~G---g~v~g~~~~~d~L~~~ar~~ifStalpP~~aaa~~~al~~l~~~~~~r~~L~~~~~~~~~~~~~~--- 313 (388)
T COG0156 240 LGKALGSSG---GYIAGSAALIDYLRNRARPFIFSTALPPAVAAAALAALRILEEGPERRERLQELAAFFRSLLKAL--- 313 (388)
T ss_pred chhhhcccC---ceeeCcHHHHHHHHHhCCceeccCCCCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc---
Confidence 9999995 7 8999999999998875433 3445678888899999999875 467888888888888555443
Q ss_pred CCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccC-----CCCCEEEEeCCCCCcHHHHHHHHHH
Q 011777 395 HDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGG-----LHGNVFRIKPPMCFTKDDADFLVDA 469 (477)
Q Consensus 395 ~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~-----~~~~~iRi~p~~~~t~e~i~~~l~~ 469 (477)
+.. ..+....++.+.+. +...+.++...|+++||++.+.. .....+|++++..+|++||+.+++.
T Consensus 314 -~~~-~~~s~s~I~pv~~g--------d~~~a~~~s~~l~~~Gi~v~~i~~PTVp~gtarlRi~lta~ht~~~I~~l~~~ 383 (388)
T COG0156 314 -GLV-LLPSESPIIPVILG--------DEERALEASRALLEEGIYVSAIRPPTVPKGTARLRITLTAAHTEEDIDRLAEA 383 (388)
T ss_pred -CCc-cCCCCCCeeeeEeC--------CHHHHHHHHHHHHHCCeeEeeecCCCCCCCcceEEEEecCCCCHHHHHHHHHH
Confidence 211 12233445555553 23457788899999999986431 1236899999999999999999999
Q ss_pred HHHH
Q 011777 470 LDYS 473 (477)
Q Consensus 470 l~~~ 473 (477)
|.++
T Consensus 384 l~~~ 387 (388)
T COG0156 384 LSEV 387 (388)
T ss_pred HHhh
Confidence 9875
No 103
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=6.1e-27 Score=235.62 Aligned_cols=326 Identities=17% Similarity=0.155 Sum_probs=214.0
Q ss_pred EEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhC------CCCCCEEEEeCChHHHHHH
Q 011777 97 RYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKM------PGNLKVVYFVNSGTEANEL 170 (477)
Q Consensus 97 ~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~------~~~~~~v~~~~sGseA~~~ 170 (477)
..+|+..|.. +++ .+|.+++++.+.+.........|+.+...+|++.+++++ +.+.++|++|+|++|++..
T Consensus 27 ~~i~l~~~~~--~~~-~~~~~~~al~~~l~~~~~~~~~Y~~~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l~~ 103 (368)
T PRK03317 27 VPVRLNTNEN--PYP-PSPALVADIAEAVAEAAAGLNRYPDRDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEILQQ 103 (368)
T ss_pred ceeEecCCCC--CCC-CCHHHHHHHHHHHhhhhhhhccCCCCchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHHHH
Confidence 3688776654 454 688999999988764221222344433455556666554 4456789999999999999
Q ss_pred HHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCC
Q 011777 171 AMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSG 250 (477)
Q Consensus 171 Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~ 250 (477)
+++.... +++.|++..++|+++....... +...++.+.. ..++.| .++++++++. .
T Consensus 104 ~~~~~~~--~gd~v~v~~P~y~~~~~~~~~~-------------g~~~~~~~~~--~~~~~d----~~~l~~~~~~---~ 159 (368)
T PRK03317 104 LLQAFGG--PGRTALGFVPSYSMHPIIARGT-------------HTEWVEGPRA--ADFTLD----VDAAVAAIAE---H 159 (368)
T ss_pred HHHHhcC--CCCEEEEeCCChHHHHHHHHhc-------------CCeeEEcccC--CCCCCC----HHHHHHHHhc---c
Confidence 9886543 5678999999998875543322 2222222211 112212 4677777752 2
Q ss_pred CeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCccee---eeccccc-Cc
Q 011777 251 KVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIV---TMAKGIG-NG 326 (477)
Q Consensus 251 ~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDiv---t~sK~lg-~G 326 (477)
++++++++..+|++|.+.+ .+++.++|+.++++||+||+|++|++.| ........+..|+++ ||||++| .|
T Consensus 160 ~~~~i~l~~p~NPtG~~~~----~~~l~~l~~~~~~~lI~DE~y~~~~~~~-~~~~~~~~~~~~~~i~~~SfSK~~g~~G 234 (368)
T PRK03317 160 RPDVVFLTSPNNPTGTALP----LDDVEAILDAAPGIVVVDEAYAEFRRSG-TPSALTLLPEYPRLVVSRTMSKAFAFAG 234 (368)
T ss_pred CCCEEEEeCCCCCCCCCCC----HHHHHHHHHHCCceEEEeCCchhhcccC-CcCHHHHHHhCCCEEEEEechhhhccch
Confidence 3444555555677786665 6666777777789999999999998766 333344444456766 8999998 69
Q ss_pred cceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccce
Q 011777 327 LPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGL 406 (477)
Q Consensus 327 ~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~ 406 (477)
+|+||+++++++++.+.... .+|+.++++++++.++|+.. +.+.++.++. ...++.+.+...+++. ....+.|.
T Consensus 235 lRiG~~~~~~~~~~~l~~~~--~~~~~s~~~~~a~~~~l~~~--~~~~~~~~~~-~~~~~~l~~~L~~~g~-~~~~~~~~ 308 (368)
T PRK03317 235 GRLGYLAAAPAVVDALRLVR--LPYHLSAVTQAAARAALRHA--DELLASVAAL-RAERDRVVAWLRELGL-RVAPSDAN 308 (368)
T ss_pred hhhhhhhCCHHHHHHHHhcC--CCCCCCHHHHHHHHHHhhCH--HHHHHHHHHH-HHHHHHHHHHHHHCCC-EeCCCCCc
Confidence 99999999999999887543 46788999999999998743 2333333222 2223333333333442 22344555
Q ss_pred eEEE-EEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHHHh
Q 011777 407 MVGM-ELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADFLVDALDYSMS 475 (477)
Q Consensus 407 ~~~i-~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~ 475 (477)
++.+ .+ + ....+.+.|+++||++.+.+ ..+++||+. .+++++++++++|+++++
T Consensus 309 ~~~~~~~--------~---~~~~~~~~l~~~Gv~v~~~~-~~~~iRi~~---~~~~~~~~~~~~l~~~~~ 363 (368)
T PRK03317 309 FVLFGRF--------A---DRHAVWQGLLDRGVLIRDVG-IPGWLRVTI---GTPEENDAFLAALAEVLA 363 (368)
T ss_pred EEEEecc--------C---CHHHHHHHHHHCCEEEEeCC-CCCeEEEec---CCHHHHHHHHHHHHHHHH
Confidence 5443 22 1 13568889999999998764 357999964 378899999999998875
No 104
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.96 E-value=3.5e-26 Score=231.10 Aligned_cols=338 Identities=14% Similarity=0.154 Sum_probs=224.7
Q ss_pred CCEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccccCC-hHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHH
Q 011777 95 GRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIYLH-HAIADFAEALASKMPGNLKVVYFVNSGTEANELAML 173 (477)
Q Consensus 95 G~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~~~-~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~ 173 (477)
+..+||+..+. +.++ .+|++.+++.+.+.... ...|.. ....++++.++++++.+.++|++++|+++|+..+++
T Consensus 27 ~~~~i~l~~~~--~~~~-~~~~~~~a~~~~~~~~~--~~~y~~~~g~~~lr~~ia~~l~~~~~~v~~~~g~t~al~~~~~ 101 (380)
T PRK06225 27 DKEMIWMGQNT--NHLG-PHEEVREAMIRCIEEGE--YCKYPPPEGFPELRELILKDLGLDDDEALITAGATESLYLVMR 101 (380)
T ss_pred cCCeEEccCCC--CCCC-CCHHHHHHHHHHHhcCC--CCCCCCCcchHHHHHHHHHhcCCCCCcEEEeCCHHHHHHHHHH
Confidence 34578877654 3454 68999999999886532 122333 346789999999988777889999999999999998
Q ss_pred HHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCC-cCCCCCCCHHHHHHHHHHHHhccCCCCe
Q 011777 174 MARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDP-YHGSFGSDAARYAQDLQDHIDFGTSGKV 252 (477)
Q Consensus 174 ~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~le~~i~~~~~~~~ 252 (477)
... .+++.|++.+++|+......... |...+.++.. ....+..| .+++++.+. +++
T Consensus 102 ~~~--~~gd~vl~~~p~y~~~~~~~~~~-------------g~~~~~v~~~~~~~~~~~d----~~~l~~~~~----~~~ 158 (380)
T PRK06225 102 AFL--SPGDNAVTPDPGYLIIDNFASRF-------------GAEVIEVPIYSEECNYKLT----PELVKENMD----ENT 158 (380)
T ss_pred Hhc--CCCCEEEEcCCCCcchHHHHHHh-------------CceEEeeccccccCCccCC----HHHHHhhcC----CCc
Confidence 653 24567999999987543222111 2222222210 01111112 366776664 345
Q ss_pred eEEE-ecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccc-cCCCcceeeeccccc-Cccce
Q 011777 253 AGFI-AETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFET-QGVIPDIVTMAKGIG-NGLPL 329 (477)
Q Consensus 253 a~vi-~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~-~gv~pDivt~sK~lg-~G~pi 329 (477)
++++ ++| ++++|. .++.+.+++|.++|++||+++|+||+|.+|.. + ....... .+...++.+|||.+| .|+|+
T Consensus 159 ~~v~l~~p-~NptG~-~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~-~-~~~~~~~~~~~~i~~~s~SK~~g~~G~Ri 234 (380)
T PRK06225 159 RLIYLIDP-LNPLGS-SYTEEEIKEFAEIARDNDAFLLHDCTYRDFAR-E-HTLAAEYAPEHTVTSYSFSKIFGMAGLRI 234 (380)
T ss_pred eEEEEeCC-CCCCCc-CCCHHHHHHHHHHHHHCCcEEEEehhHHHHhc-c-CCchhhcCCCCEEEEeechhhcCCcccee
Confidence 5554 555 556664 55788899999999999999999999987743 2 1111111 123345668999998 69999
Q ss_pred EEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCC--ceeeecccee
Q 011777 330 GAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDI--IGDVRGRGLM 407 (477)
Q Consensus 330 g~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~--~~~v~g~g~~ 407 (477)
||+++++++++.+.... .++++.|.+++.++.++++. .+++.+++++..+..++.+.+..++.+. +...+..|.+
T Consensus 235 G~i~~~~~l~~~~~~~~-~~~~~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~ 311 (380)
T PRK06225 235 GAVVATPDLIEVVKSIV-INDLGTNVIAQEAAIAGLKV--KDEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGNM 311 (380)
T ss_pred EEEecCHHHHHHHHHHH-hcccCCCHHHHHHHHHHHhc--chHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCCCeE
Confidence 99999999998876532 35678889999888888764 2345555555555545555544444322 2223456788
Q ss_pred EEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCC-----CCCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 408 VGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGL-----HGNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 408 ~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~-----~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
+++++.... ....++.+.|.++||.+.++.. ..+++|++. ..+++++++++++|.+++++
T Consensus 312 ~~~~~~~~~-------~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~iR~s~--~~~~e~l~~~~~~l~~~~~~ 376 (380)
T PRK06225 312 MVIDISEAG-------IDPEDLVEYLLERKIFVRQGTYTSKRFGDRYIRVSF--SIPREQVEVFCEEFPDVVET 376 (380)
T ss_pred EEEEccccc-------CCHHHHHHHHHHCCEEEcCCcccCcCCCCceEEEEe--CCCHHHHHHHHHHHHHHHHH
Confidence 888874211 1245688888899999988621 235899974 46899999999999998864
No 105
>PRK07682 hypothetical protein; Validated
Probab=99.95 E-value=2.5e-26 Score=232.05 Aligned_cols=338 Identities=13% Similarity=0.098 Sum_probs=217.7
Q ss_pred EEEeecCCcccccCCCCCHHHHHHHHHHHhhcc--ccccccCChHHHHHHHHHHhhCC--CCCC-EEEEeCChHHHHHHH
Q 011777 97 RYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQ--HATTIYLHHAIADFAEALASKMP--GNLK-VVYFVNSGTEANELA 171 (477)
Q Consensus 97 ~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~--~~~~~~~~~~~~~l~~~La~~~~--~~~~-~v~~~~sGseA~~~A 171 (477)
..|+|..|... ++ .++.+.+++.+.++... +....+..+.+.++++++.+.++ .+.+ +|++|+|+++|+..+
T Consensus 21 ~~i~l~~~~~~--~~-~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~ 97 (378)
T PRK07682 21 GVISLGVGEPD--FV-TPWNVREASIRSLEQGYTSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALDVA 97 (378)
T ss_pred CeEEeCCCCCC--CC-CCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHH
Confidence 36777776653 44 46678888888776421 22223344566677777766533 2333 799999999999999
Q ss_pred HHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCC
Q 011777 172 MLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGK 251 (477)
Q Consensus 172 l~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~ 251 (477)
++... .+++.|++.+++|+++.......+. ..+.++......+..| .+++++++. ++
T Consensus 98 ~~~l~--~~gd~vl~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~d----~~~l~~~~~----~~ 154 (378)
T PRK07682 98 MRAII--NPGDEVLIVEPSFVSYAPLVTLAGG-------------VPVPVATTLENEFKVQ----PAQIEAAIT----AK 154 (378)
T ss_pred HHHhC--CCCCEEEEeCCCchhhHHHHHHcCC-------------EEEEeecCCccCCCCC----HHHHHhhcC----cc
Confidence 88653 3668899999999876443322221 1122221111111112 467777664 24
Q ss_pred eeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccc-cccCC---Ccceeeeccccc-Cc
Q 011777 252 VAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGF-ETQGV---IPDIVTMAKGIG-NG 326 (477)
Q Consensus 252 ~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~-~~~gv---~pDivt~sK~lg-~G 326 (477)
++++++...+|++|. .++++.+++|.++|++||+++|+||+|.+|.+.+ .+.++ ...+. ...+.+|||.++ .|
T Consensus 155 ~~~v~~~~p~NPtG~-~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~~~~~~i~~~S~SK~~~~~G 232 (378)
T PRK07682 155 TKAILLCSPNNPTGA-VLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDE-AYTSFASIKGMRERTILISGFSKGFAMTG 232 (378)
T ss_pred cEEEEEECCCCCcCc-CcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCC-CCCChhhcccccCCEEEEecCcccccChh
Confidence 555544444666774 6688899999999999999999999999987665 32222 11222 223447999999 69
Q ss_pred cceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhch--hhHHHHHHHHHHHHHHHHHHHHHhCCCceeeecc
Q 011777 327 LPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDK--ERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGR 404 (477)
Q Consensus 327 ~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~ 404 (477)
+|+||+++++++++.+.......+++.+++++.++.++|+..+. ++..+.++++.+.+.+.|++ ++. ....+.
T Consensus 233 lR~G~~~~~~~~i~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~----~~~-~~~~p~ 307 (378)
T PRK07682 233 WRLGFIAAPVYFSEAMLKIHQYSMMCAPTMAQFAALEALRAGNDDVIRMRDSYRKRRNFFVTSFNE----IGL-TCHVPG 307 (378)
T ss_pred hhhhhhhcCHHHHHHHHHHHHhhccCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHH----CCC-ccCCCC
Confidence 99999999999999887654445567889999999888864221 22334444555555555544 332 222333
Q ss_pred -ceeEEEEEeeCCCCCCccHHHHHHHHHHHH-HcCceeeccCCC----CCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 405 -GLMVGMELVTDRKEKTPAKAETAVLFEKLR-ELGVLVGKGGLH----GNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 405 -g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~----~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
|+++|+.+.... ....++.+.++ ++||.+.++..+ .+++||+.. .+++++++++++|.+++++
T Consensus 308 g~~~~~~~~~~~~-------~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis~~--~~~~~l~~~l~~l~~~l~~ 376 (378)
T PRK07682 308 GAFYAFPSISSTG-------LSSEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYA--TSLEQLQEAMKRMKRFVEN 376 (378)
T ss_pred eeEEEEEeccCCC-------CCHHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEEeC--CCHHHHHHHHHHHHHHHhh
Confidence 455566553210 12346777765 689999987432 478999755 5789999999999998865
No 106
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.95 E-value=9.3e-26 Score=229.52 Aligned_cols=344 Identities=13% Similarity=0.062 Sum_probs=220.3
Q ss_pred CCEEEeecCCcccccCCCCCHHHHHHHHHHHhhc---cccccccCChHHHHHHHHHHhhCC--CCC-CEEEEeCChHHHH
Q 011777 95 GRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLL---QHATTIYLHHAIADFAEALASKMP--GNL-KVVYFVNSGTEAN 168 (477)
Q Consensus 95 G~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~---~~~~~~~~~~~~~~l~~~La~~~~--~~~-~~v~~~~sGseA~ 168 (477)
++..+||..|... .++ .+|.+.+++.+.+... .|....+..+.+..+++++++..+ .+. ++|++|+|+++|+
T Consensus 38 ~~~~i~l~~g~~~-~~~-p~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~al 115 (405)
T PRK06207 38 PGRPVDFSHGDVD-AHE-PTPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGAL 115 (405)
T ss_pred CCCceecCCcCCC-CCC-CCHHHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHH
Confidence 4456677766543 333 5678999988877642 122223344567788888887755 344 7899999999999
Q ss_pred HHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCc---CCCCCCCHHHHHHHHHHHHh
Q 011777 169 ELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPY---HGSFGSDAARYAQDLQDHID 245 (477)
Q Consensus 169 ~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~le~~i~ 245 (477)
..+++... .+++.|++.+++|++........+ ...++++..+ ...++.| .++|+++++
T Consensus 116 ~~~~~~l~--~~Gd~Vlv~~P~y~~~~~~~~~~g-------------~~v~~v~~~~~~~~~~~~~d----~~~l~~~~~ 176 (405)
T PRK06207 116 FLAVAATV--ARGDKVAIVQPDYFANRKLVEFFE-------------GEMVPVQLDYLSADKRAGLD----LDQLEEAFK 176 (405)
T ss_pred HHHHHHhc--CCCCEEEEeCCCchhHHHHHHHcC-------------CEEEEEeccccCcccCCCcC----HHHHHHhhh
Confidence 99888653 366889999999988654433322 1222221110 0111112 467777765
Q ss_pred ccCCCCee-EEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCC----Ccceeeec
Q 011777 246 FGTSGKVA-GFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGV----IPDIVTMA 320 (477)
Q Consensus 246 ~~~~~~~a-~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv----~pDivt~s 320 (477)
.+++ .+++.| +|++| .+.+.+.+++|.++|++||++||+||+|..|.+.|..+-.+..... ..-+-+||
T Consensus 177 ----~~~k~v~l~~P-~NPTG-~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfS 250 (405)
T PRK06207 177 ----AGVRVFLFSNP-NNPAG-VVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPS 250 (405)
T ss_pred ----hcCeEEEECCC-CCCCC-cCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecch
Confidence 2344 455556 56666 5568888999999999999999999999988665522111111111 22233689
Q ss_pred cccc-CccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCce
Q 011777 321 KGIG-NGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIG 399 (477)
Q Consensus 321 K~lg-~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~ 399 (477)
|.++ .|+|+||+++++++++.+........++.+.+.+.++.++|+.- +.+.++..+.....++.+.+...+++.+.
T Consensus 251 K~~~lpGlRiG~ii~~~~l~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~ 328 (405)
T PRK06207 251 KTESLSGYRLGVAFGSPAIIDRMEKLQAIVSLRAAGYSQAVLRTWFSEP--DGWMKDRIARHQAIRDDLLRVLRGVEGVF 328 (405)
T ss_pred hhccCcccceEEEEcCHHHHHHHHHHHhHhccCCCHHHHHHHHHHHhCc--HHHHHHHHHHHHHHHHHHHHHHhcCCCce
Confidence 9999 79999999999999988876544455566778888888877531 12222222222223333433333343233
Q ss_pred eeec-cceeEEEEEeeCCCCCCccHHHHHHHHHHHH-HcCceeeccCCC----CCEEEEeCCCCCcHHHHHHHHHHHHHH
Q 011777 400 DVRG-RGLMVGMELVTDRKEKTPAKAETAVLFEKLR-ELGVLVGKGGLH----GNVFRIKPPMCFTKDDADFLVDALDYS 473 (477)
Q Consensus 400 ~v~g-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~----~~~iRi~p~~~~t~e~i~~~l~~l~~~ 473 (477)
...+ .|+++|+++.... ....++.+.|+ ++||.+.|+..+ .+++||+.. .+++++++++++|.++
T Consensus 329 ~~~p~gg~fl~~~l~~~~-------~~~~~~~~~l~~~~gV~v~pG~~F~~~~~~~~Ris~~--~~~~~l~~al~rl~~~ 399 (405)
T PRK06207 329 VRAPQAGSYLFPRLPRLA-------VSLHDFVKILRLQAGVIVTPGTEFSPHTADSIRLNFS--QDHAAAVAAAERIAQL 399 (405)
T ss_pred ecCCCeeEEEEEeCcccC-------CCHHHHHHHHHHhcCEEEeCchHhCCCCCCeEEEEec--CCHHHHHHHHHHHHHH
Confidence 3333 4778888873210 12356777786 689999998543 478999765 4789999999999998
Q ss_pred Hhh
Q 011777 474 MSK 476 (477)
Q Consensus 474 l~~ 476 (477)
+++
T Consensus 400 l~~ 402 (405)
T PRK06207 400 IER 402 (405)
T ss_pred HHH
Confidence 864
No 107
>PLN00175 aminotransferase family protein; Provisional
Probab=99.95 E-value=9e-26 Score=229.95 Aligned_cols=340 Identities=14% Similarity=0.077 Sum_probs=220.0
Q ss_pred EEEeecCCcccccCCCCCHHHHHHHHHHHhhc--cccccccCChHHHHHHHHHHhhCC--CCCC-EEEEeCChHHHHHHH
Q 011777 97 RYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLL--QHATTIYLHHAIADFAEALASKMP--GNLK-VVYFVNSGTEANELA 171 (477)
Q Consensus 97 ~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~--~~~~~~~~~~~~~~l~~~La~~~~--~~~~-~v~~~~sGseA~~~A 171 (477)
..+||..|.+. +. .++.+.+++.+.++.. .|....+..+.+..+++.+.+..+ .+.+ +|++|+|+++|+..+
T Consensus 55 ~~i~l~~G~P~--~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~al~~~ 131 (413)
T PLN00175 55 GAINLGQGFPN--FD-GPDFVKEAAIQAIRDGKNQYARGFGVPELNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAIAAT 131 (413)
T ss_pred CeEecCCCCCC--CC-CCHHHHHHHHHHHhcCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHHHHHH
Confidence 57898888763 22 4788999998887752 122222334556666666665543 2344 699999999999998
Q ss_pred HHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCC
Q 011777 172 MLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGK 251 (477)
Q Consensus 172 l~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~ 251 (477)
+.... .+++.|++.+++|..+.......+ ...+.++.... .+..+ .++|++.+. .+
T Consensus 132 ~~~l~--~~gd~Vlv~~P~y~~~~~~~~~~g-------------~~~~~v~~~~~-~~~~~----~~~l~~~~~----~~ 187 (413)
T PLN00175 132 ILGLI--NPGDEVILFAPFYDSYEATLSMAG-------------AKIKTVTLRPP-DFAVP----EDELKAAFT----SK 187 (413)
T ss_pred HHHhC--CCCCEEEEeCCCchhHHHHHHHcC-------------CEEEEEECCcc-cCCCC----HHHHHHhcC----cC
Confidence 87543 467889999999987644333221 22222211100 12212 467777765 34
Q ss_pred eeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccc-cccCC---Ccceeeeccccc-Cc
Q 011777 252 VAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGF-ETQGV---IPDIVTMAKGIG-NG 326 (477)
Q Consensus 252 ~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~-~~~gv---~pDivt~sK~lg-~G 326 (477)
+++|++.+.+|++| .+.+++.+++|.++|++||+++|+||+|..|.+.+ ....+ +..+. ..-+-+|||.++ .|
T Consensus 188 ~k~i~i~~p~NPtG-~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~-~~~s~~~~~~~~~~vi~i~SfSK~~~~~G 265 (413)
T PLN00175 188 TRAILINTPHNPTG-KMFTREELELIASLCKENDVLAFTDEVYDKLAFEG-DHISMASLPGMYERTVTMNSLGKTFSLTG 265 (413)
T ss_pred ceEEEecCCCCCCC-cCCCHHHHHHHHHHHHHcCcEEEEecccCccccCC-cccChhhCCCCcCcEEEEecchhhccCcc
Confidence 66777766677777 45689999999999999999999999999886544 22222 22222 223347999999 69
Q ss_pred cceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeecc-c
Q 011777 327 LPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGR-G 405 (477)
Q Consensus 327 ~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~-g 405 (477)
+|+||+++++++++.+.......+++.+.+.+.++.++|+.. +.+.++.++..+..++.+.+..++++. ....+. |
T Consensus 266 ~RiG~~v~~~~l~~~l~~~~~~~~~~~s~~~Q~a~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~p~g~ 342 (413)
T PLN00175 266 WKIGWAIAPPHLTWGVRQAHSFLTFATATPMQWAAVAALRAP--ESYYEELKRDYSAKKDILVEGLKEVGF-KVYPSSGT 342 (413)
T ss_pred hheeeeEeCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHCCC-eecCCCee
Confidence 999999999999988876555567888999999998888642 233333333333333333333333442 223344 4
Q ss_pred eeEEEEEeeCCCCCCccHHHHHHHHHHHH-HcCceeeccCCC-------CCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 406 LMVGMELVTDRKEKTPAKAETAVLFEKLR-ELGVLVGKGGLH-------GNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 406 ~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~-------~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
.++|+.+.... .. ...++.+.|+ ++||.+.|+..+ .+++||+.. .+++++++++++|.+++++
T Consensus 343 ~f~~~~~~~~~---~~---~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~--~~~e~l~~~~~rL~~~~~~ 413 (413)
T PLN00175 343 YFVMVDHTPFG---FE---NDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFC--KDEETLRAAVERMKTKLKR 413 (413)
T ss_pred EEEEEeccccC---CC---CHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEc--CCHHHHHHHHHHHHHHHhC
Confidence 55677652110 00 1346777775 569999987432 368999764 5899999999999998763
No 108
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.95 E-value=1.2e-25 Score=227.46 Aligned_cols=338 Identities=15% Similarity=0.113 Sum_probs=220.4
Q ss_pred EEEeecCCcccccCCCCCHHHHHHHHHHHhhcc--ccccccCChHHHHHHHHHHhhCC--CCCCEEEEeCChHHHHHHHH
Q 011777 97 RYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQ--HATTIYLHHAIADFAEALASKMP--GNLKVVYFVNSGTEANELAM 172 (477)
Q Consensus 97 ~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~--~~~~~~~~~~~~~l~~~La~~~~--~~~~~v~~~~sGseA~~~Al 172 (477)
..+||..|.+. ++ .++.+.+++.+.+.... +....+..+.+..+++.+.+.++ .+.++|++++|+++|+..++
T Consensus 25 ~~i~l~~g~~~--~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al~~~~ 101 (382)
T PRK06108 25 GVLPLWFGESD--LP-TPDFIRDAAAAALADGETFYTHNLGIPELREALARYVSRLHGVATPPERIAVTSSGVQALMLAA 101 (382)
T ss_pred CeEEecCCCCC--CC-CCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHHHHHH
Confidence 46888877753 33 37899999988876532 22223345667777777776655 55679999999999999998
Q ss_pred HHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcC-CCCCCCHHHHHHHHHHHHhccCCCC
Q 011777 173 LMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYH-GSFGSDAARYAQDLQDHIDFGTSGK 251 (477)
Q Consensus 173 ~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~le~~i~~~~~~~ 251 (477)
+.... +++.|++.+++|.......... |...+.+|.... ..+..| .+++++.++ .+
T Consensus 102 ~~l~~--~gd~vl~~~p~y~~~~~~~~~~-------------g~~~~~v~~~~~~~~~~~d----~~~l~~~~~----~~ 158 (382)
T PRK06108 102 QALVG--PGDEVVAVTPLWPNLVAAPKIL-------------GARVVCVPLDFGGGGWTLD----LDRLLAAIT----PR 158 (382)
T ss_pred HHhcC--CCCEEEEeCCCccchHHHHHHC-------------CCEEEEeeCCCCCCCccCC----HHHHHHhcC----cc
Confidence 86533 5678999999987654332221 222222222110 111111 467777664 24
Q ss_pred eeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCC-CCCCcc-ccccCCCcc---eeeeccccc-C
Q 011777 252 VAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRT-GSHYWG-FETQGVIPD---IVTMAKGIG-N 325 (477)
Q Consensus 252 ~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~-G~~~~~-~~~~gv~pD---ivt~sK~lg-~ 325 (477)
+++++++..+|++|. ..+.+.+++|.++|++||+++|+||+|.+|.+. +..... .+..+.... +.+|||.++ .
T Consensus 159 ~~~i~l~~p~NPtG~-~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~ 237 (382)
T PRK06108 159 TRALFINSPNNPTGW-TASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMT 237 (382)
T ss_pred ceEEEEECCCCCCCc-ccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCc
Confidence 556666555677774 468899999999999999999999999988654 211111 111111122 337999998 5
Q ss_pred ccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhch--hhHHHHHHHHHHHHHHHHHHHHHhCCCceeeec
Q 011777 326 GLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDK--ERRQAHCADVGSHLLGRLRTLQERHDIIGDVRG 403 (477)
Q Consensus 326 G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g 403 (477)
|+|+||+++++++++.+.......+++.+++.+.++.++|+...+ ++..++++++.+++.+.|++ .+.+....+
T Consensus 238 G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~p 313 (382)
T PRK06108 238 GWRLGWLVAPPALGQVLEKLIEYNTSCVAQFVQRAAVAALDEGEDFVAELVARLRRSRDHLVDALRA----LPGVEVAKP 313 (382)
T ss_pred ccceeeeeCCHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHh----CCCCcccCC
Confidence 999999999999988876554445667789999999888864311 23344444455555554443 332333334
Q ss_pred c-ceeEEEEEeeCCCCCCccHHHHHHHHHHHH-HcCceeeccCCC----CCEEEEeCCCCCcHHHHHHHHHHHHHHHh
Q 011777 404 R-GLMVGMELVTDRKEKTPAKAETAVLFEKLR-ELGVLVGKGGLH----GNVFRIKPPMCFTKDDADFLVDALDYSMS 475 (477)
Q Consensus 404 ~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~----~~~iRi~p~~~~t~e~i~~~l~~l~~~l~ 475 (477)
. |+++++.+... ....++.+.|+ ++||.+.++..+ .+++||++.. +++++++++++|.++++
T Consensus 314 ~~g~~~~~~l~~~--------~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~~--~~~~l~~~l~~l~~~l~ 381 (382)
T PRK06108 314 DGAMYAFFRIPGV--------TDSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFAR--DPARLDEAVERLRRFLA 381 (382)
T ss_pred CeeEEEEEeCCCC--------CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC--CHHHHHHHHHHHHHHHh
Confidence 4 55667766321 12346777764 579999887432 4789998776 89999999999999875
No 109
>PRK07324 transaminase; Validated
Probab=99.95 E-value=3.6e-26 Score=230.08 Aligned_cols=343 Identities=14% Similarity=0.102 Sum_probs=222.9
Q ss_pred EeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCC-CCCCEEEEeCChHHHHH
Q 011777 91 FDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMP-GNLKVVYFVNSGTEANE 169 (477)
Q Consensus 91 ~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~-~~~~~v~~~~sGseA~~ 169 (477)
++..|..++++..|-.. +. .++.+ +++.+++........ ......+|++.+++++. .+.++|++|+|+++|+.
T Consensus 21 ~~~~~~~~~~~~~~e~~--~~-~~~~~-~~~~~~~~~~~~~Y~--~~~G~~~lr~~ia~~~~~~~~~~vi~t~G~~~al~ 94 (373)
T PRK07324 21 YDIAESCIDSLTLEELL--AL-AGKNP-EAFYQELGQKKLTYG--WIEGSPEFKEAVASLYQNVKPENILQTNGATGANF 94 (373)
T ss_pred cccccCCCCCCcHHHHH--hc-cCcch-HHHHHHHhcCCccCC--CCCCCHHHHHHHHHHhcCCChhhEEEcCChHHHHH
Confidence 34555556666554432 11 35566 788777765322111 12234567777777653 35678999999999999
Q ss_pred HHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCC
Q 011777 170 LAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTS 249 (477)
Q Consensus 170 ~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~ 249 (477)
.++.... .+++.|++..++|.......... |...+.+|......+..| .+++++++.
T Consensus 95 ~~~~~l~--~~gd~Vl~~~P~y~~~~~~~~~~-------------g~~v~~v~~~~~~~~~~d----~~~l~~~~~---- 151 (373)
T PRK07324 95 LVLYALV--EPGDHVISVYPTYQQLYDIPESL-------------GAEVDYWQLKEENGWLPD----LDELRRLVR---- 151 (373)
T ss_pred HHHHHhC--CCCCEEEEcCCCchhHHHHHHHc-------------CCEEEEEecccccCCCCC----HHHHHHhCC----
Confidence 9988653 35678999999987664332222 222222222111112111 466766654
Q ss_pred CCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccc-cccCCCcceeeeccccc-Ccc
Q 011777 250 GKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGF-ETQGVIPDIVTMAKGIG-NGL 327 (477)
Q Consensus 250 ~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~-~~~gv~pDivt~sK~lg-~G~ 327 (477)
.++++|++...+|++| .+.+++.+++|.++|++||+++|+||+|.++...+ ....+ +..+....+-+|||.++ .|+
T Consensus 152 ~~~kli~i~~p~NPtG-~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~-~~~s~~~~~~~~I~~~s~SK~~~~~G~ 229 (373)
T PRK07324 152 PNTKLICINNANNPTG-ALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDG-STPSIADLYEKGISTNSMSKTYSLPGI 229 (373)
T ss_pred CCCcEEEEeCCCCCCC-CCCCHHHHHHHHHHHHHCCCEEEEEccccccccCC-CCCChhhccCCEEEEecchhhcCCccc
Confidence 3556777766667777 45688899999999999999999999999887654 22221 22222223447999999 699
Q ss_pred ceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccc-e
Q 011777 328 PLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRG-L 406 (477)
Q Consensus 328 pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g-~ 406 (477)
|+||+++++++++.+.......+++.+.+++.++..+|+. .+.+.++.++..+..++.+.+..++++.+..+.+.| .
T Consensus 230 RiG~i~~~~~li~~~~~~~~~~~~~~~~~~q~~a~~~l~~--~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~p~gg~ 307 (373)
T PRK07324 230 RVGWIAANEEVIDILRKYRDYTMICAGVFDDMLASLALEH--RDAILERNRKIVRTNLAILDEWVAKEPRVSYVKPKAVS 307 (373)
T ss_pred eeEEEecCHHHHHHHHHHhCcEEecCChHHHHHHHHHHcC--HHHHHHHHHHHHHHHHHHHHHHHhcCCCceEECCCceE
Confidence 9999999999999888766666788888999888887752 244555555554444555555554555454555555 4
Q ss_pred eEEEEEeeCCCCCCccHHHHHHHHHHHH-HcCceeeccCCC--CCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 407 MVGMELVTDRKEKTPAKAETAVLFEKLR-ELGVLVGKGGLH--GNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 407 ~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~--~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
+.++.+... ....++.+.|+ ++||.+.|+..+ .+++||+. ..+++.+++++++|.+++++
T Consensus 308 ~~~i~~~~~--------~~~~~~~~~ll~~~gv~v~pg~~F~~~~~iRis~--~~~~~~l~~~l~rl~~~l~~ 370 (373)
T PRK07324 308 TSFVKLDVD--------MPSEDFCLKLLKETGVLLVPGNRFDLEGHVRIGY--CCDTETLKKGLKKLSEFLRE 370 (373)
T ss_pred EEEEEeCCC--------CCHHHHHHHHHHhcCEEEECccccCCCCeEEEEe--cCCHHHHHHHHHHHHHHHHh
Confidence 445555221 12345677664 679999998644 37899964 56799999999999998864
No 110
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=5.1e-26 Score=228.20 Aligned_cols=323 Identities=14% Similarity=0.103 Sum_probs=216.2
Q ss_pred EEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHH
Q 011777 97 RYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMAR 176 (477)
Q Consensus 97 ~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar 176 (477)
.++||.++.. ++| .+|.+.+++.++++...+ |+.....++++.+++++..+.++|++|+|+++++..+++...
T Consensus 30 ~~i~l~~n~~--~~~-~~~~v~~a~~~~~~~~~~----~p~~g~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~~~ 102 (359)
T PRK03158 30 KIVKLASNEN--PYG-PSPKVKEAIAAHLDELAL----YPDGYAPELRTKVAKHLGVDEEQLLFGAGLDEVIQMISRALL 102 (359)
T ss_pred ceEEecCCCC--CCC-CCHHHHHHHHHHHHHhhc----CCCCcHHHHHHHHHHHhCCCHHHEEECCCHHHHHHHHHHHHh
Confidence 6789888765 466 488999999988765332 334456778888888887667889999999999998877543
Q ss_pred hccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEE
Q 011777 177 LSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFI 256 (477)
Q Consensus 177 ~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi 256 (477)
.+++.|++.+++|+++....... |.....+|.. . +..| ++++++.++ +++++++
T Consensus 103 --~~gd~v~~~~p~y~~~~~~~~~~-------------g~~~~~~~~~-~--~~~d----~~~l~~~~~----~~~~~v~ 156 (359)
T PRK03158 103 --NPGTNTVMAEPTFSQYRHNAIIE-------------GAEVREVPLK-D--GGHD----LEAMLKAID----EQTKIVW 156 (359)
T ss_pred --CCCCEEEEcCCCHHHHHHHHHHc-------------CCeEEEEecC-C--CCcC----HHHHHHhcC----CCCCEEE
Confidence 35678999999999864433222 1122222211 1 1111 456666554 3455666
Q ss_pred ecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccc---cccCCCcceeeeccccc-CccceEEE
Q 011777 257 AETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGF---ETQGVIPDIVTMAKGIG-NGLPLGAV 332 (477)
Q Consensus 257 ~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~---~~~gv~pDivt~sK~lg-~G~pig~v 332 (477)
++..+|++|.+. +.+.+.++.+.|+ +|+++|+||+|..|...+...... +..+...-+.+|||.+| .|+|+||+
T Consensus 157 i~~p~NPtG~~~-~~~~l~~~~~~~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~ 234 (359)
T PRK03158 157 ICNPNNPTGTYV-NHEELLSFLESVP-SHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYG 234 (359)
T ss_pred EeCCCCCCCCCC-CHHHHHHHHHhCC-CCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhhehh
Confidence 555577788655 4455555555543 699999999998875433111111 12222222347999999 69999999
Q ss_pred EeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEE
Q 011777 333 VTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMEL 412 (477)
Q Consensus 333 ~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~ 412 (477)
++++++++.+.... .+++.|++++.++.++|+ +.++.+++++..+..++.+.+...+++ +...++.|.++++.+
T Consensus 235 v~~~~~~~~~~~~~--~~~~~~~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~g~~i~~~~ 308 (359)
T PRK03158 235 IASEELIEKLNIAR--PPFNTTRIAQYAAIAALE---DQAFLKECVEKNAEGLEQYYAFCKEYG-LFYYPSQTNFIFVDT 308 (359)
T ss_pred cCCHHHHHHHHHhc--CCCCCCHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHHHHCC-CeeCCCcCcEEEEEC
Confidence 99999998886543 357889999999998885 334455555544555555555444554 333556788888876
Q ss_pred eeCCCCCCccHHHHHHHHHHHHHcCceeeccCCC--CCEEEEeCCCCCcHHHHHHHHHHHHHH
Q 011777 413 VTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLH--GNVFRIKPPMCFTKDDADFLVDALDYS 473 (477)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~--~~~iRi~p~~~~t~e~i~~~l~~l~~~ 473 (477)
.. ...++.+.|+++||.+.++..+ .+++||+.. +++++++++++|+++
T Consensus 309 ~~----------~~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~~---~~~~~~~l~~al~~~ 358 (359)
T PRK03158 309 GR----------DANELFEALLKKGYIVRSGAALGFPTGVRITIG---LKEQNDKIIELLKEL 358 (359)
T ss_pred CC----------CHHHHHHHHHHCCeEEeeCCCCCCCCeEEEecC---CHHHHHHHHHHHHHh
Confidence 21 1356888888999999997433 478999643 899999999999875
No 111
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.95 E-value=1e-25 Score=226.80 Aligned_cols=331 Identities=17% Similarity=0.176 Sum_probs=220.4
Q ss_pred CCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHH
Q 011777 94 NGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAML 173 (477)
Q Consensus 94 dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~ 173 (477)
+++.++||.++.. .+| .+|.+.+++.+.+.... .|......++++.++++++.+.++|++++|+++++..+++
T Consensus 30 ~~~~~i~l~~~~~--~~~-~~~~~~~a~~~~~~~~~----~y~~~~~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~ 102 (367)
T PRK02731 30 GIADIIKLASNEN--PLG-PSPKAIEAIRAAADELH----RYPDGSGFELKAALAEKFGVDPERIILGNGSDEILELLAR 102 (367)
T ss_pred CCCceEEecCCCC--CCC-CCHHHHHHHHHHHHhhc----CCCCCcHHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHH
Confidence 6778999988763 466 57889999988776432 3443445688899999887766789999999999988776
Q ss_pred HHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCee
Q 011777 174 MARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVA 253 (477)
Q Consensus 174 ~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a 253 (477)
... .+++.|++.+++|.++....... |.....+|.. .+..| ++++++.++ ++++
T Consensus 103 ~l~--~~gd~vl~~~p~y~~~~~~~~~~-------------g~~~~~~~~~---~~~~~----~~~l~~~~~----~~~~ 156 (367)
T PRK02731 103 AYL--GPGDEVIYSEHGFAVYPIAAQAV-------------GAKPVEVPAK---DYGHD----LDAMLAAVT----PRTR 156 (367)
T ss_pred Hhc--CCCCEEEEecCCHHHHHHHHHHc-------------CCeEEEeccc---CCCCC----HHHHHHHhC----CCCc
Confidence 542 35678999999887654332221 2222222210 11111 467777665 3456
Q ss_pred EEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCccee---eeccccc-Cccce
Q 011777 254 GFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIV---TMAKGIG-NGLPL 329 (477)
Q Consensus 254 ~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDiv---t~sK~lg-~G~pi 329 (477)
+|+++..++++|.+. +.+.++++.+.|+ +|+++|+||+|..+.+.+....++...+..++++ +|||.+| .|+|+
T Consensus 157 ~v~l~~p~nptG~~~-~~~~l~~l~~~~~-~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~Ri 234 (367)
T PRK02731 157 LVFIANPNNPTGTYL-PAEEVERFLAGVP-PDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRV 234 (367)
T ss_pred EEEEeCCCCCCCcCC-CHHHHHHHHHhCC-CCcEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEeeehHhhcCcccce
Confidence 666666677778555 4444555554443 5999999999987765441122223333334444 7999998 69999
Q ss_pred EEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEE
Q 011777 330 GAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVG 409 (477)
Q Consensus 330 g~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~ 409 (477)
||+++++++++.+.... .+++.+.+++.++.+.|+ .+++.++.++..+..++.+.+...+++.. ..++.|.+++
T Consensus 235 G~l~~~~~~~~~l~~~~--~~~~~~~~~~~~a~~~l~---~~~~~~~~~~~~~~~~~~l~~~L~~~g~~-~~~~~g~~~~ 308 (367)
T PRK02731 235 GYGIAPPEIIDALNRVR--QPFNVNSLALAAAVAALD---DDAFVEKSRALNAEGMAWLTEFLAELGLE-YIPSVGNFIL 308 (367)
T ss_pred eeeeCCHHHHHHHHHcc--CCCCCCHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHHHCCCc-cCCCCceEEE
Confidence 99999999998887543 356778888888888775 33444555555455555555544444432 2345688888
Q ss_pred EEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCC--CCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 410 MELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLH--GNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 410 i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~--~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
+.+... ....++.+.|.++||.+.++..+ .+++|+++. +.++++++++.|+++++.
T Consensus 309 i~~~~~--------~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~e~~~l~~aL~~~~~~ 366 (367)
T PRK02731 309 VDFDDG--------KDAAEAYQALLKRGVIVRPVAGYGLPNALRITIG---TEEENRRFLAALKEFLAA 366 (367)
T ss_pred EECCCC--------CCHHHHHHHHHHCCEEEEeCCCCCCCCeEEEecC---CHHHHHHHHHHHHHHHhc
Confidence 887211 12457888999999999987544 378999754 789999999999998753
No 112
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.95 E-value=1.8e-25 Score=227.31 Aligned_cols=339 Identities=14% Similarity=0.054 Sum_probs=216.8
Q ss_pred CCEEEeecCCcccccCCCCCHHHHHHHHHHHhhcc-ccc-cccCChHHHHHHHHHHhhCC--CCC-CEEEEeCChHHHHH
Q 011777 95 GRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQ-HAT-TIYLHHAIADFAEALASKMP--GNL-KVVYFVNSGTEANE 169 (477)
Q Consensus 95 G~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~-~~~-~~~~~~~~~~l~~~La~~~~--~~~-~~v~~~~sGseA~~ 169 (477)
|..++||..|... ++ .++.+.+++.+.+.... +.. ..+..+.++.+++.+.+..+ .+. ++|++|+|+++|+.
T Consensus 31 ~~~~i~l~~g~p~--~~-~~~~~~~~~~~~~~~~~~~~y~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~ 107 (399)
T PRK07681 31 GHKMIDLSIGNPD--MP-PADFVREEMVHTANQKESYGYTLSGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDGLV 107 (399)
T ss_pred CCCeEEeCCCCCC--CC-CCHHHHHHHHHHHhccccCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHHHH
Confidence 5678898887643 44 46888888888765421 111 12333445566666655432 355 68999999999999
Q ss_pred HHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCC
Q 011777 170 LAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTS 249 (477)
Q Consensus 170 ~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~ 249 (477)
.+++... .+++.|++.+++|.++....... |...+++|......+..| .+++++.+.
T Consensus 108 ~~~~~~~--~~Gd~Vlv~~P~y~~~~~~~~~~-------------G~~~~~v~~~~~~~~~~d----~~~l~~~~~---- 164 (399)
T PRK07681 108 HLPMVYA--NPGDIILVPDPGYTAYETGIQMA-------------GATSYYMPLKKENDFLPD----LELIPEEIA---- 164 (399)
T ss_pred HHHHHhC--CCCCEEEECCCCccchHHHHHhc-------------CCEEEEEecCCCCCCcCC----HHHHHHhcc----
Confidence 9887653 35678999999998875544333 223333322111112111 356666554
Q ss_pred CCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccc-cc---cCCCcceeeeccccc-
Q 011777 250 GKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGF-ET---QGVIPDIVTMAKGIG- 324 (477)
Q Consensus 250 ~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~-~~---~gv~pDivt~sK~lg- 324 (477)
.++++|++...+|++| .+.+++.+++|.++|++||++||+||+|.+|...+.....+ .. .+....+-+|||.++
T Consensus 165 ~~~k~v~l~~P~NPTG-~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~ 243 (399)
T PRK07681 165 DKAKMMILNFPGNPVP-AMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSL 243 (399)
T ss_pred ccceEEEEeCCCCCcC-cCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeecccccCC
Confidence 2455666653356666 55688899999999999999999999999885444111111 11 122233457999998
Q ss_pred CccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeecc
Q 011777 325 NGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGR 404 (477)
Q Consensus 325 ~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~ 404 (477)
.|+|+||+++++++++.+.......+++.+.+.+.++.++|+.. +.+.++.++..+..++.+.+...++++....+..
T Consensus 244 ~GlRiG~~i~~~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p~~ 321 (399)
T PRK07681 244 AGSRIGYMIGNEEIVRALTQFKSNTDYGVFLPIQKAACAALRNG--AAFCEKNRGIYQERRDTLVDGFRTFGWNVDKPAG 321 (399)
T ss_pred ccceeEEEecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCc--HHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCe
Confidence 79999999999999988876554456778888888888888642 2333333333333333333333334422112334
Q ss_pred ceeEEEEEeeCCCCCCccHHHHHHHHHHHHH-cCceeeccCCC----CCEEEEeCCCCCcHHHHHHHHHHHHH
Q 011777 405 GLMVGMELVTDRKEKTPAKAETAVLFEKLRE-LGVLVGKGGLH----GNVFRIKPPMCFTKDDADFLVDALDY 472 (477)
Q Consensus 405 g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~~~----~~~iRi~p~~~~t~e~i~~~l~~l~~ 472 (477)
|.++|+++... ....++.+.+++ +||.+.++..+ .+++||+.. .+++++++++++|.+
T Consensus 322 g~f~~~~l~~~--------~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~--~~~~~~~~~l~~l~~ 384 (399)
T PRK07681 322 SMFVWAEIPKG--------WTSLSFAYALMDRANVVVTPGHAFGPHGEGFVRIALV--QDEEVLQQAVENIRN 384 (399)
T ss_pred eeEEEEECCCC--------CCHHHHHHHHHHhCCEEEeCChhhCcCCCCeEEEEec--CCHHHHHHHHHHHHH
Confidence 77888877321 123567777776 89999987432 368999754 678999999999987
No 113
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.95 E-value=2.6e-25 Score=228.39 Aligned_cols=351 Identities=13% Similarity=0.051 Sum_probs=219.2
Q ss_pred eeEEeeeccEEEeCC----------CCEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccccCCh-HHHHHHHHHH
Q 011777 80 LNIVEGKMQYLFDEN----------GRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIYLHH-AIADFAEALA 148 (477)
Q Consensus 80 ~~~~~g~G~~~~d~d----------G~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~~~~-~~~~l~~~La 148 (477)
+....++|.+|.+.+ +...+||..|.. ..-..|.+.+++.+...... .|..+ ...+|++.++
T Consensus 59 i~~~~~~G~~v~~~~~~~~~~~~~~~~~~i~L~~g~p---~~~~~p~~~~~~~~~~~~~~----~Y~~~~g~~~lr~~ia 131 (431)
T PRK15481 59 AQSQGRNGTVIRGSPSPVALEGGDPGTPLHDLAGGNP---DPQRLPDLSRYFARLSRTPR----LYGDAPVSPELHAWAA 131 (431)
T ss_pred EEEeCCCceEEccCcchhhhcccCCcchhhhhhcCCC---ChhHhHHHHHHHHHhhhhhh----hcCCcCCCHHHHHHHH
Confidence 445566777775422 223456554432 11123566777666544321 12211 1234555555
Q ss_pred hhCC---CCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCc
Q 011777 149 SKMP---GNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPY 225 (477)
Q Consensus 149 ~~~~---~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (477)
+++. ...++|++|+|+++|+..+++.... +++.|++.+++|.++.......+ ...+++|...
T Consensus 132 ~~~~~~~~~~~~Iiit~G~~~al~~~~~~l~~--pgd~Vlv~~P~y~~~~~~~~~~g-------------~~~~~v~~~~ 196 (431)
T PRK15481 132 RWLRDDCPVAFEIDLTSGAIDAIERLLCAHLL--PGDSVAVEDPCFLSSINMLRYAG-------------FSASPVSVDA 196 (431)
T ss_pred HHHhhccCCcCeEEEecCcHHHHHHHHHHhCC--CCCEEEEeCCCcHHHHHHHHHcC-------------CeEEeeccCC
Confidence 5432 1235899999999999999886543 56889999999988765544432 2222222110
Q ss_pred CCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecc-cCCCCCeeeCCchhHHHHHHHHHHh-CcEEEEcCcccCccCCCCC
Q 011777 226 HGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAET-IQGVGGAVELAPGYLKLVYDIVRKA-GGVCIADEVQTGFGRTGSH 303 (477)
Q Consensus 226 ~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~ep-i~~~~G~~~~~~~~l~~l~~l~~~~-gillI~DEv~~gfgr~G~~ 303 (477)
..++ .++++++++ .+++++++.| .||++| ...+++.+++|.++|++| +++||+||+|..|...+ .
T Consensus 197 -~g~~------~~~l~~~~~----~~~k~i~~~p~p~NPTG-~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~-~ 263 (431)
T PRK15481 197 -EGMQ------PEKLERALA----QGARAVILTPRAHNPTG-CSLSARRAAALRNLLARYPQVLVIIDDHFALLSSSP-Y 263 (431)
T ss_pred -CCCC------HHHHHHHHh----cCCCEEEECCCCCCCCC-ccCCHHHHHHHHHHHHhcCCceEEecCchhhhccCC-C
Confidence 1122 477888775 2455666654 555666 556888999999999999 99999999999885433 1
Q ss_pred Cccccc-cCCCcceeeecccccCccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHH
Q 011777 304 YWGFET-QGVIPDIVTMAKGIGNGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGS 382 (477)
Q Consensus 304 ~~~~~~-~gv~pDivt~sK~lg~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~ 382 (477)
.-.... .....-+-+|||.++.|+|+||+++++++++.+.......+++.+.+++.++.++|+.-..+++++.+++..+
T Consensus 264 ~~~~~~~~~~vi~~~SfSK~~~~GlRiG~~i~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~ 343 (431)
T PRK15481 264 HSVIPQTTQRWALIRSVSKALGPDLRLAFVASDSATSARLRLRLNSGTQWVSHLLQDLVYACLTDPEYQARLAQARLFYA 343 (431)
T ss_pred CCCCcCCCCCEEEEeeeccccCCCceeEEEeCCHHHHHHHHHHHhccccCCCHHHHHHHHHHHhCccHHHHHHHHHHHHH
Confidence 111111 1111223379999999999999999999988886544444566789999999998874322222333333333
Q ss_pred HHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCC-----CCEEEEeCCCC
Q 011777 383 HLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLH-----GNVFRIKPPMC 457 (477)
Q Consensus 383 ~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~-----~~~iRi~p~~~ 457 (477)
..++.+.+...+++.....+..|+++|+.+.. ...++.+.|.++||.+.++..+ ++++||+...
T Consensus 344 ~~r~~~~~~L~~~~~~~~~p~gg~f~~~~l~~----------~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~iRis~~~- 412 (431)
T PRK15481 344 QRRQKLARALQQYGIAIPSPGDGLNLWLPLDT----------DSQATALTLAKSGWLVREGEAFGVSAPSHGLRITLST- 412 (431)
T ss_pred HHHHHHHHHHHHcCCccccCCCeEEEEEECCC----------CHHHHHHHHHHCCcEEecCCccccCCCCCeEEEEcCC-
Confidence 33333333333344322234568888887731 1346778888999999997543 3589998654
Q ss_pred CcHHHHHHHHHHHHHHHhh
Q 011777 458 FTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 458 ~t~e~i~~~l~~l~~~l~~ 476 (477)
.+++++++++++|.+++.+
T Consensus 413 ~~~~~i~~~~~~l~~~~~~ 431 (431)
T PRK15481 413 LNDAEINRLAADLHQALNR 431 (431)
T ss_pred CChHHHHHHHHHHHHHhcC
Confidence 5789999999999998753
No 114
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.95 E-value=3.2e-25 Score=223.04 Aligned_cols=322 Identities=16% Similarity=0.166 Sum_probs=215.4
Q ss_pred CEEEeecCCcccccCCCC-CHHHHHHHHHHHhhc--------cccccc----cCChHHHHHHHHHHhhCCCCCCEEEEeC
Q 011777 96 RRYLDAFAGIVTVSCGHC-HPDVLNAIFEQSKLL--------QHATTI----YLHHAIADFAEALASKMPGNLKVVYFVN 162 (477)
Q Consensus 96 ~~ylD~~~g~~~~~lGh~-~p~v~~Av~~~l~~~--------~~~~~~----~~~~~~~~l~~~La~~~~~~~~~v~~~~ 162 (477)
.+++||.++.+ ||++ +|++.+++.+++.+. .+.... +.++...+++++|+++++. +.+++.+
T Consensus 4 ~~~~~~~s~~Y---L~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~--~~~l~~~ 78 (370)
T PRK05937 4 SLSIDFVTNDF---LGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGA--PEAFIVP 78 (370)
T ss_pred CceEEeECCCc---cCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCC--CeEEEEC
Confidence 35778877664 7764 899999999988774 222211 2456789999999999976 4668888
Q ss_pred ChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHH
Q 011777 163 SGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQD 242 (477)
Q Consensus 163 sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~ 242 (477)
||+.||...+. ...+++++|+.+..+|+.....+.... +.. +.+ ++. | ++++++
T Consensus 79 sG~~a~~~~~~---~~~~~~d~ii~d~~~H~sv~~~~~~~~-----------~~~-~~~------~~~-d----~~~l~~ 132 (370)
T PRK05937 79 SGYMANLGLCA---HLSSVTDYVLWDEQVHISVVYSLSVIS-----------GWH-QSF------RHN-D----LDHLES 132 (370)
T ss_pred ChHHHHHHHHH---HhCCCCCEEEEEhhhhHHHHHHHHHcC-----------Cce-EEe------cCC-C----HHHHHH
Confidence 99999864333 233567889999999998776655421 100 111 111 1 477888
Q ss_pred HHhccC--CCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCccc-C-ccCCCCCCccc--cccCCCcce
Q 011777 243 HIDFGT--SGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQT-G-FGRTGSHYWGF--ETQGVIPDI 316 (477)
Q Consensus 243 ~i~~~~--~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~-g-fgr~G~~~~~~--~~~gv~pDi 316 (477)
+++... .+++.+|+++++++++|.+.| +++|.++|+++|+++|+||+|+ | ++.+| ..+.. ...+..+|+
T Consensus 133 ~l~~~~~~~~~~~~v~v~~v~s~~G~i~p----l~eI~~l~~~~~~~livDea~~~G~~g~~g-~g~~~~~~~~~~~~~~ 207 (370)
T PRK05937 133 LLESCRQRSFGRIFIFVCSVYSFKGTLAP----LEQIIALSKKYHAHLIVDEAHAMGIFGDDG-KGFCHSLGYENFYAVL 207 (370)
T ss_pred HHHhhhccCCCcEEEEEecCCCCCCCccC----HHHHHHHHHHcCCEEEEECCccccccCCCC-CchHHhhCCCCCcEEE
Confidence 886322 134567889999999999888 9999999999999999999998 3 45555 22111 111233678
Q ss_pred eeecccccC-ccceEEEEeCHHHHHhhcc--cccccCCCCcHHHHHHHHHHHHhhchh--hHHHHHHHHHHHHHHHHHHH
Q 011777 317 VTMAKGIGN-GLPLGAVVTTPEIANVMAQ--KIQFNTFGGNPVCSAGGLAVLRVIDKE--RRQAHCADVGSHLLGRLRTL 391 (477)
Q Consensus 317 vt~sK~lg~-G~pig~v~~~~~~~~~~~~--~~~~~t~~~~~~~~aaa~a~l~~l~~~--~~~~~~~~~~~~l~~~L~~l 391 (477)
.||||++|+ | +++++.+++.+.+.. ..+..+.+.++.+++++.++++.+.++ ...++++++.+++++.|...
T Consensus 208 ~tlsK~~g~~G---~~vl~~~~~~~~~~~~~~~~~~s~~~~~~~~~a~~aal~~l~~~~~~~~~~l~~l~~~l~~~l~~~ 284 (370)
T PRK05937 208 VTYSKALGSMG---AALLSSSEVKQDLMLNSPPLRYSTGLPPHLLISIQVAYDFLSQEGELARKQLFRLKEYFAQKFSSA 284 (370)
T ss_pred EechhhhhcCc---eEEEcCHHHHHHHHHhCCCCeecCCCCHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCC
Confidence 899999985 5 445666776555432 123334456788888888999887543 24455555555555544221
Q ss_pred HHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccC-CCCCEEEEeCCCCCcHHHHHHHHHHH
Q 011777 392 QERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGG-LHGNVFRIKPPMCFTKDDADFLVDAL 470 (477)
Q Consensus 392 ~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~-~~~~~iRi~p~~~~t~e~i~~~l~~l 470 (477)
+.+....+.+.. .....+.+.|.++||.+.... ...+++||+++..+|++||+++++.|
T Consensus 285 -----------~~~~~~~i~~~~---------~~~~~~~~~L~~~gi~v~~~~~~~~~~iRis~~~~~t~edid~l~~~L 344 (370)
T PRK05937 285 -----------APGCVQPIFLPG---------ISEQELYSKLVETGIRVGVVCFPTGPFLRVNLHAFNTEDEVDILVSVL 344 (370)
T ss_pred -----------CCCCEEEEEeCC---------hhHHHHHHHHHHCCeeEEeeCCCCCCEEEEEcCCCCCHHHHHHHHHHH
Confidence 112222233311 123578888999999886431 12468999999999999999999999
Q ss_pred HHHHhh
Q 011777 471 DYSMSK 476 (477)
Q Consensus 471 ~~~l~~ 476 (477)
++++++
T Consensus 345 ~~~~~~ 350 (370)
T PRK05937 345 ATYLEK 350 (370)
T ss_pred HHHHHH
Confidence 988764
No 115
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.95 E-value=2.6e-25 Score=225.40 Aligned_cols=344 Identities=11% Similarity=0.032 Sum_probs=211.3
Q ss_pred CCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhcc---ccccccCChHHHHHHHHHHhhCC--CCCC-EEEEeCChHHH
Q 011777 94 NGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQ---HATTIYLHHAIADFAEALASKMP--GNLK-VVYFVNSGTEA 167 (477)
Q Consensus 94 dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~---~~~~~~~~~~~~~l~~~La~~~~--~~~~-~v~~~~sGseA 167 (477)
+|+.++||..|.. .++ .++.+.+++.+.+.... +....+..+.+..+++++.+..+ .+.+ +|++|+|+++|
T Consensus 28 ~~~~~i~l~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~a 104 (388)
T PRK07366 28 AGKELIDLSLGSS--DLP-APAHALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQEG 104 (388)
T ss_pred cCCCeEEeCCCCC--CCC-CCHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHHH
Confidence 4666788877764 344 47889999988775321 11112223445555555554433 4456 69999999999
Q ss_pred HHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhcc
Q 011777 168 NELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFG 247 (477)
Q Consensus 168 ~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~ 247 (477)
+..+++.... +++.|++.+++|.++...+...+ ...+++|......+..| ++++++.+.
T Consensus 105 l~~~~~~l~~--~gd~Vlv~~P~y~~~~~~~~~~g-------------~~~~~v~~~~~~~~~~d----~~~l~~~~~-- 163 (388)
T PRK07366 105 TAHLPLAVLN--PGDFALLLDPGYPSHAGGVYLAG-------------GQIYPMPLRAENDFLPV----FADIPTEVL-- 163 (388)
T ss_pred HHHHHHHhCC--CCCEEEEcCCCCcchHHHHHhcC-------------CEEEEEECCCccCCCCC----HHHHHHhhc--
Confidence 9998886433 56889999999988755444332 22222222111112111 244544433
Q ss_pred CCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCC-Cccc---ccc-CCCcceeeeccc
Q 011777 248 TSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSH-YWGF---ETQ-GVIPDIVTMAKG 322 (477)
Q Consensus 248 ~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~-~~~~---~~~-gv~pDivt~sK~ 322 (477)
.++++|++.+.+|++| ...+.+.+++|.++|++||++||+||+|..|.+.+.. ...+ +.. ....-+-+|||.
T Consensus 164 --~~~k~i~l~~p~NPTG-~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~ 240 (388)
T PRK07366 164 --AQARLMVLSYPHNPTT-AIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKS 240 (388)
T ss_pred --ccceEEEEeCCCCCCC-ccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccc
Confidence 2345566666667777 4568899999999999999999999999988654421 1111 111 111223379999
Q ss_pred cc-CccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceee
Q 011777 323 IG-NGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDV 401 (477)
Q Consensus 323 lg-~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v 401 (477)
+| .|+|+||+++++++++.+........++..+..+.++.+++. +.++++++.++..+..++.+.+..++++.....
T Consensus 241 ~g~~GlRiG~~v~~~~li~~l~~~~~~~~~~~~~~~~~~a~~~l~--~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~ 318 (388)
T PRK07366 241 YNMGGFRIGFAIGNAQLIQALRQVKAVVDFNQYRGILNGAIAALT--GPQATVQQTVQIFRQRRDAFINALHQIGWPVPL 318 (388)
T ss_pred cCCcchhheehcCCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHh--CcHHHHHHHHHHHHHHHHHHHHHHHHCCCcccC
Confidence 98 799999999999999888765433344443333445555553 223444444444444444444444444432233
Q ss_pred eccceeEEEEEeeCCCCCCccHHHHHHHHHHH-HHcCceeeccCCC----CCEEEEeCCCCCcHHHHHHHHHHHHHHH
Q 011777 402 RGRGLMVGMELVTDRKEKTPAKAETAVLFEKL-RELGVLVGKGGLH----GNVFRIKPPMCFTKDDADFLVDALDYSM 474 (477)
Q Consensus 402 ~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~~~----~~~iRi~p~~~~t~e~i~~~l~~l~~~l 474 (477)
+..|+++|+++.... .....++.+.+ .++||.+.|+..+ .+++||+.. .+++++++++++|.+.+
T Consensus 319 p~~g~f~~~~~~~~~------~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~--~~~~~l~~~l~rl~~~l 388 (388)
T PRK07366 319 PEATMYVWAKLPEPW------QGNSVEFCTQLVAQTGVAASPGSGFGKSGEGYVRFALV--HDPDILEEAVERIAAFL 388 (388)
T ss_pred CCeeEEEEEECCccc------CCCHHHHHHHHHHhCCEEEeCchHhCcCCCCeEEEEec--CCHHHHHHHHHHHHHhC
Confidence 456788888873210 00134566655 5679999997432 368999754 57999999999998753
No 116
>PLN02483 serine palmitoyltransferase
Probab=99.95 E-value=1.1e-24 Score=225.47 Aligned_cols=333 Identities=16% Similarity=0.138 Sum_probs=222.7
Q ss_pred eCCCCEEEeecCCcccccCCCC--CHHHHHHHHHHHhhcccc--ccc---cCChHHHHHHHHHHhhCCCCCCEEEEeCCh
Q 011777 92 DENGRRYLDAFAGIVTVSCGHC--HPDVLNAIFEQSKLLQHA--TTI---YLHHAIADFAEALASKMPGNLKVVYFVNSG 164 (477)
Q Consensus 92 d~dG~~ylD~~~g~~~~~lGh~--~p~v~~Av~~~l~~~~~~--~~~---~~~~~~~~l~~~La~~~~~~~~~v~~~~sG 164 (477)
..+++++|+|.+..+ ||.+ ++.+.+++.+++++.... .+. +..+...+++++|+++++. +..++.++|
T Consensus 96 ~~~~~~~~n~~s~~Y---Lgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g~--~~ai~~~~G 170 (489)
T PLN02483 96 TTKTRRCLNLGSYNY---LGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVGK--PAAIVFGMG 170 (489)
T ss_pred cCCCceEEEeecCCc---cCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhCC--CcEEEECCH
Confidence 346789999987665 6654 677888888888775321 222 3467889999999999974 344555778
Q ss_pred HHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHH
Q 011777 165 TEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHI 244 (477)
Q Consensus 165 seA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i 244 (477)
+.++..++... ..+++.|++.++.|++...+.. .. |.....++. + | .+++++++
T Consensus 171 ~~an~~~i~al--~~~Gd~Vi~d~~~h~s~~~~~~-~~------------Ga~v~~~~~------~-d----~~~le~~l 224 (489)
T PLN02483 171 YATNSTIIPAL--IGKGGLIISDSLNHNSIVNGAR-GS------------GATIRVFQH------N-T----PSHLEEVL 224 (489)
T ss_pred HHHHHHHHHHh--CCCCCEEEEcchhhHHHHHHHH-Hc------------CCeEEEEeC------C-C----HHHHHHHH
Confidence 88888777653 2356677777777766544322 21 222222111 1 1 24555554
Q ss_pred hcc----C-----CCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccC--ccCCCCCCccccccCCC
Q 011777 245 DFG----T-----SGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTG--FGRTGSHYWGFETQGVI 313 (477)
Q Consensus 245 ~~~----~-----~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g--fgr~G~~~~~~~~~gv~ 313 (477)
+.. . +....+|++|++.++.|.+.+ +++|.++|++||++||+||+|+- +|++| .. ..+++++.
T Consensus 225 ~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~~----l~~I~~la~~~~~~livDEa~s~g~~G~~G-~g-~~~~~~v~ 298 (489)
T PLN02483 225 REQIAEGQPRTHRPWKKIIVIVEGIYSMEGELCK----LPEIVAVCKKYKAYVYLDEAHSIGAVGKTG-RG-VCELLGVD 298 (489)
T ss_pred HhhhhccccccccCCceEEEEECCCCCCCCcccC----HHHHHHHHHHcCCEEEEECcCccCccCCCC-Cc-hHHhcCCC
Confidence 311 1 112458889999999888877 99999999999999999999972 34555 21 23455554
Q ss_pred c---cee--eecccccC-ccceEEEEeCHHHHHhhcccccccCCC--CcHHHHHHHHHHHHhhchh-------hHHHHHH
Q 011777 314 P---DIV--TMAKGIGN-GLPLGAVVTTPEIANVMAQKIQFNTFG--GNPVCSAGGLAVLRVIDKE-------RRQAHCA 378 (477)
Q Consensus 314 p---Div--t~sK~lg~-G~pig~v~~~~~~~~~~~~~~~~~t~~--~~~~~~aaa~a~l~~l~~~-------~~~~~~~ 378 (477)
| |++ ||||++|+ | ||+++++++++.+.......+++ .+|..++++.++|+.+..+ +..++++
T Consensus 299 ~~~~dI~~~SfSKs~g~~G---G~i~~~~~li~~l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~ 375 (489)
T PLN02483 299 PADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKRTCPAHLYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIR 375 (489)
T ss_pred cccCcEEEEecchhcccCc---eEEEcCHHHHHHHHHhCccccccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHH
Confidence 3 555 89999985 5 99999999999987654444443 3566777778888766421 3456777
Q ss_pred HHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCC-----CCCEEEEe
Q 011777 379 DVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGL-----HGNVFRIK 453 (477)
Q Consensus 379 ~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~-----~~~~iRi~ 453 (477)
++.+++++.|+++ ...+.. ...+.+.++.+.. .....++.+.|+++||.+.+.+. ..+.+||+
T Consensus 376 ~~~~~l~~~L~~~--G~~v~~--~~~sp~~~l~l~~--------~~~~~~~~~~Ll~~GI~v~~~~fp~~p~~~~~vRi~ 443 (489)
T PLN02483 376 ENSNFFRSELQKM--GFEVLG--DNDSPVMPIMLYN--------PAKIPAFSRECLKQNVAVVVVGFPATPLLLARARIC 443 (489)
T ss_pred HHHHHHHHHHHHC--CCcccC--CCCCCEEEEEECC--------HHHHHHHHHHHHHCCcEEeeeCCCCCCCCCceEEEE
Confidence 7888888888775 222111 1223455555521 12355788999999999985422 12689999
Q ss_pred CCCCCcHHHHHHHHHHHHHHHhh
Q 011777 454 PPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 454 p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
++..+|+|||++++++|+++++.
T Consensus 444 isa~~t~edId~~l~~L~~~~~~ 466 (489)
T PLN02483 444 ISASHSREDLIKALEVISEVGDL 466 (489)
T ss_pred eCCCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998753
No 117
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.95 E-value=7.2e-25 Score=223.11 Aligned_cols=354 Identities=12% Similarity=0.049 Sum_probs=220.7
Q ss_pred CCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhc---cccccccCChHHHHHHHHHHhhCC--CCCC-EEEEeCChHHH
Q 011777 94 NGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLL---QHATTIYLHHAIADFAEALASKMP--GNLK-VVYFVNSGTEA 167 (477)
Q Consensus 94 dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~---~~~~~~~~~~~~~~l~~~La~~~~--~~~~-~v~~~~sGseA 167 (477)
.|..++|+..|... +..++.+.+++.+.+... .+....+..+.+..+++.+.+..+ .+.+ +|++|+|+++|
T Consensus 31 ~~~~~~~l~~g~p~---~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~a 107 (403)
T PRK08636 31 AGEDIIDFSMGNPD---GPTPQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRKYNVDLDPETEVVATMGSKEG 107 (403)
T ss_pred cCCCEEEcCCcCCC---CCCCHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEECCChHHH
Confidence 45568898777543 334566777777665431 122222334456677777766543 3455 79999999999
Q ss_pred HHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhcc
Q 011777 168 NELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFG 247 (477)
Q Consensus 168 ~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~ 247 (477)
+..+++... .+++.|++.+++|.+........ |...+++|......++-|.....+.++++++..
T Consensus 108 l~~~~~~l~--~~gd~Vlv~~P~y~~~~~~~~~~-------------g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~ 172 (403)
T PRK08636 108 YVHLVQAIT--NPGDVAIVPDPAYPIHSQAFILA-------------GGNVHKMPLEYNEDFELDEDQFFENLEKALRES 172 (403)
T ss_pred HHHHHHHhC--CCCCEEEEcCCCCcchHHHHHhc-------------CCEEEEEeccccccCccChhhhhhHHHHHHhhc
Confidence 999988653 36789999999998875544333 222333322111123333333334567766532
Q ss_pred CCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCC---cccccc-CCCcceeeecccc
Q 011777 248 TSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHY---WGFETQ-GVIPDIVTMAKGI 323 (477)
Q Consensus 248 ~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~---~~~~~~-gv~pDivt~sK~l 323 (477)
. .++.++++...+|++| .+++.+.+++|.++|++|+++||+||+|..|...+... ..++.. +....+.+|||.+
T Consensus 173 ~-~~~~~i~~~~P~NPTG-~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 250 (403)
T PRK08636 173 S-PKPKYVVVNFPHNPTT-ATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYTLSKSY 250 (403)
T ss_pred c-CCceEEEEeCCCCCCC-ccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCCccccEEEEEeccccc
Confidence 2 3455555554356666 56688999999999999999999999999885544111 112111 1222334699999
Q ss_pred c-CccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeee
Q 011777 324 G-NGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVR 402 (477)
Q Consensus 324 g-~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~ 402 (477)
| .|+|+||+++++++++.+........++.+.+.+.++..+++. .+++++++++..+..++.+.+...+++.....+
T Consensus 251 ~~~GlRiG~iv~~~~li~~~~~~~~~~~~~~~~~~q~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p 328 (403)
T PRK08636 251 NMAGWRVGFVVGNKKLVGALKKIKSWLDYGMFTPIQVAATIALDG--DQSCVEEIRETYRKRRDVLIESFANAGWELQKP 328 (403)
T ss_pred CCccceeeeeeCCHHHHHHHHHHHHHhcccCChHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCC
Confidence 7 7999999999999998877644333456666777776666542 234444444444444444444443444221223
Q ss_pred ccceeEEEEEeeCCCCCCccHHHHHHHHHH-HHHcCceeeccCCC----CCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 403 GRGLMVGMELVTDRKEKTPAKAETAVLFEK-LRELGVLVGKGGLH----GNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 403 g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~-l~~~Gv~v~~~~~~----~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
..|+++|+.+..... .....++.+. +.++||.+.|+..+ .+++||+.. .+++++++++++|.++++.
T Consensus 329 ~~g~~~~~~l~~~~~-----~~~~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi~~~--~~~~~l~~~~~rl~~~l~~ 400 (403)
T PRK08636 329 RASMFVWAKIPEPAR-----HLGSLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIALI--ENENRIRQAARNIKKFLKE 400 (403)
T ss_pred CcceEEEEECCCccC-----CCCHHHHHHHHHHhCCEEEecchhhCcCCCCeEEEEec--CCHHHHHHHHHHHHHHHHh
Confidence 457888888732100 0013456655 44689999998432 378999764 6899999999999998864
No 118
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.95 E-value=5.1e-25 Score=220.03 Aligned_cols=328 Identities=19% Similarity=0.184 Sum_probs=218.8
Q ss_pred CEEEeecCCcccccCCCC-CHHHHHHHHHHHhhcccccc-----ccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHH
Q 011777 96 RRYLDAFAGIVTVSCGHC-HPDVLNAIFEQSKLLQHATT-----IYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANE 169 (477)
Q Consensus 96 ~~ylD~~~g~~~~~lGh~-~p~v~~Av~~~l~~~~~~~~-----~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~ 169 (477)
++||.|+++.+ |||+ ||+|++++++++++..+..+ ....+...++++.|+++++. +..+++++|++++.
T Consensus 1 ~~~~~~~~~~~---~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~--~~~iv~~sg~~a~~ 75 (349)
T cd06454 1 KKVLNFCSNDY---LGLANHPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFHGK--EAALVFSSGYAAND 75 (349)
T ss_pred CCceecccCCc---cccCCCHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHhCC--CCEEEeccHHHHHH
Confidence 46888887664 9997 99999999999987533211 13467788999999999865 35678889999999
Q ss_pred HHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccC-
Q 011777 170 LAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGT- 248 (477)
Q Consensus 170 ~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~- 248 (477)
.+++.+. .+++.|++.++.|... ....... |...+.++. . | .++++++++...
T Consensus 76 ~~~~~~~--~~gd~Vl~~~~~~~~~-~~~~~~~------------g~~~~~~~~-----~--~----~~~le~~i~~~~~ 129 (349)
T cd06454 76 GVLSTLA--GKGDLIISDSLNHASI-IDGIRLS------------GAKKRIFKH-----N--D----MEDLEKLLREARR 129 (349)
T ss_pred HHHHHhc--CCCCEEEEehhhhHHH-HHHHHHc------------CCceEEecC-----C--C----HHHHHHHHHHhhc
Confidence 8887553 3456677766554332 2111111 222222211 0 1 366777776321
Q ss_pred CCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCC--CCc-cccccCCCccee--eecccc
Q 011777 249 SGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGS--HYW-GFETQGVIPDIV--TMAKGI 323 (477)
Q Consensus 249 ~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~--~~~-~~~~~gv~pDiv--t~sK~l 323 (477)
+.++++|+++++++++|...+ +++|.++|++||+++|+||+|. +|..+. ... .........|++ +++|.+
T Consensus 130 ~~~~~~v~~~~~~~~tG~~~~----~~~i~~~~~~~~~~livD~a~~-~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~ 204 (349)
T cd06454 130 PYGKKLIVTEGVYSMDGDIAP----LPELVDLAKKYGAILFVDEAHS-VGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAF 204 (349)
T ss_pred cCCCeEEEEeccccCCCCccC----HHHHHHHHHHcCCEEEEEcccc-ccccCCCCCChhhhccccccCcEEEeechhhh
Confidence 346789999998888897766 8999999999999999999986 332220 111 011111234554 689999
Q ss_pred cCccceEEEEeCHHHHHhhccccc--ccCCCCcHHHHHHHHHHHHhhch-hhHHHHHHHHHHHHHHHHHHHHHhCCCcee
Q 011777 324 GNGLPLGAVVTTPEIANVMAQKIQ--FNTFGGNPVCSAGGLAVLRVIDK-ERRQAHCADVGSHLLGRLRTLQERHDIIGD 400 (477)
Q Consensus 324 g~G~pig~v~~~~~~~~~~~~~~~--~~t~~~~~~~~aaa~a~l~~l~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~ 400 (477)
+. +.|++++++++++.+..... ..+.+.++..++++.++++.+.+ ++..+++.++.+++.+.|.++ ......
T Consensus 205 ~~--~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~--g~~~~~- 279 (349)
T cd06454 205 GA--VGGYIAGSKELIDYLRSYARGFIFSTSLPPAVAAAALAALEVLQGGPERRERLQENVRYLRRGLKEL--GFPVGG- 279 (349)
T ss_pred cc--cCCEEECCHHHHHHHHHhchhhhccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhc--CCcccC-
Confidence 85 34899999998877754322 22335678888888999987765 556778888888888887664 222111
Q ss_pred eeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCC-----CCCEEEEeCCCCCcHHHHHHHHHHHHHH
Q 011777 401 VRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGL-----HGNVFRIKPPMCFTKDDADFLVDALDYS 473 (477)
Q Consensus 401 v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~-----~~~~iRi~p~~~~t~e~i~~~l~~l~~~ 473 (477)
.+.+.+.++.+ . ......++.+.|+++||.+.+++. .++++||+++..++++++++++++|+++
T Consensus 280 -~~~~~~~~~~~-~-------~~~~~~~~~~~L~~~gI~~~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 280 -SPSHIIPPLIG-D-------DPAKAVAFSDALLERGIYVQAIRYPTVPRGTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred -CCCCcEEEEeC-C-------ChHHHHHHHHHHHhCCceEEEecCCccCCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 12233333322 1 122356788999999999976421 2478999999989999999999999864
No 119
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=3.7e-25 Score=221.72 Aligned_cols=325 Identities=17% Similarity=0.191 Sum_probs=215.7
Q ss_pred CCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHH
Q 011777 94 NGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAML 173 (477)
Q Consensus 94 dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~ 173 (477)
+|..++||..|.. .++ .+|.+.+++.+.++... .|+.....+|++.++++++.+.++|++|+|+++++..+++
T Consensus 28 ~~~~~i~l~~~~~--~~~-~~~~~~~~~~~~~~~~~----~Y~~~~~~~lr~~ia~~~~~~~~~I~it~G~~~al~~~~~ 100 (357)
T PRK14809 28 DPDDLVKLSSNEN--PHG-PSPAAVEAIREAAERVH----SYPKASHADLTAALADRWDVSPEQVWLANGGDGALDYLAR 100 (357)
T ss_pred CccceeEecCCCC--CCC-CCHHHHHHHHHHHhhhh----cCCCCCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHH
Confidence 4557899887654 455 57889999988765421 2444446788899999888778899999999999999888
Q ss_pred HHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCee
Q 011777 174 MARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVA 253 (477)
Q Consensus 174 ~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a 253 (477)
... .+++.|++.+++|..+.......+. ++..++.+. ...+..+ .+++++... +++
T Consensus 101 ~~~--~~gd~V~v~~P~y~~~~~~~~~~g~-----------~~~~~~l~~--~~~~~~~----~~~~~~~~~-----~~k 156 (357)
T PRK14809 101 AML--DPGDTVLVPDPGFAYYGMSARYHHG-----------EVREYPVSK--ADDFEQT----ADTVLDAYD-----GER 156 (357)
T ss_pred Hhc--CCCCEEEEeCCChHHHHHHHHHcCC-----------eEEEEeccc--CcCCCcC----HHHHHHhhc-----CCc
Confidence 653 3567899999998644332211110 122222211 1112211 234433322 234
Q ss_pred EEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCcc-ccccCCCcceeeeccccc-CccceEE
Q 011777 254 GFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWG-FETQGVIPDIVTMAKGIG-NGLPLGA 331 (477)
Q Consensus 254 ~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~-~~~~gv~pDivt~sK~lg-~G~pig~ 331 (477)
+|++...+|++|. .++.+.+++|.++|++ +++||+||+|..|...+ .... .+..+....+-+|||.++ .|+|+||
T Consensus 157 ~i~l~~p~NPTG~-~~s~~~~~~l~~~~~~-~~~iI~De~y~~~~~~~-~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ 233 (357)
T PRK14809 157 IVYLTSPHNPTGS-EIPLDEVEALAERTDE-ETLVVVDEAYGEFAERP-SAVALVEERDDVAVLRTFSKAYGLAGLRLGY 233 (357)
T ss_pred EEEEeCCCCCCCc-CCCHHHHHHHHHhCcc-CcEEEEechhhhccCCc-hhHHHHhhCCCEEEEecchhHhcCcchhhee
Confidence 5555556677774 5577778888888875 78999999999886544 2221 122223334558999998 6999999
Q ss_pred EEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEE
Q 011777 332 VVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGME 411 (477)
Q Consensus 332 v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~ 411 (477)
+++++++++.+.... .+++.+++++.++.++|+ ++++.++.++..+..++.+.+..... ..+..|++++++
T Consensus 234 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~l~---~~~~~~~~~~~~~~~r~~l~~~L~~~----~~~~~g~f~~~~ 304 (357)
T PRK14809 234 AVVPEEWADAYARVN--TPFAASELACRAGLAALD---DDEHVERTVETARWAREYIREELDAP----TWESAGNFVLAE 304 (357)
T ss_pred eecCHHHHHHHHHhC--CCCCCCHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHhcCc----cCCCCCCEEEEE
Confidence 999999998887543 467788898888888875 34444444444444445454443322 124568888887
Q ss_pred EeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCC--CCEEEEeCCCCCcHHHHHHHHHHHHHHHh
Q 011777 412 LVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLH--GNVFRIKPPMCFTKDDADFLVDALDYSMS 475 (477)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~--~~~iRi~p~~~~t~e~i~~~l~~l~~~l~ 475 (477)
+. + ..++.+.|.++||.+.++..+ .+++||+.. +++++++++++|.++++
T Consensus 305 ~~--------~---~~~~~~~l~~~gv~v~~g~~f~~~~~iRls~~---~~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 305 VG--------D---ASAVAEAAQERGVIVRDCTSFGLPECIRITCG---TREETERAVEVLNEVLA 356 (357)
T ss_pred CC--------C---HHHHHHHHHHCCEEEEECccCCCCCeEEEecC---CHHHHHHHHHHHHHHhc
Confidence 62 1 346778888999999998644 368999643 57999999999999875
No 120
>PRK08960 hypothetical protein; Provisional
Probab=99.95 E-value=9.1e-25 Score=221.29 Aligned_cols=341 Identities=12% Similarity=0.035 Sum_probs=217.6
Q ss_pred CCEEEeecCCcccccCCCCCHHHHHHHHHHHhhc--cccccccCChHHHHHHHHHHhhC--CCCCCEEEEeCChHHHHHH
Q 011777 95 GRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLL--QHATTIYLHHAIADFAEALASKM--PGNLKVVYFVNSGTEANEL 170 (477)
Q Consensus 95 G~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~--~~~~~~~~~~~~~~l~~~La~~~--~~~~~~v~~~~sGseA~~~ 170 (477)
|..++|+..|... ++ .++.+.+++.+.+... .+....+..+.++.+++.+.+.. +.+.++|++|+|+++|+..
T Consensus 31 ~~~~i~l~~g~~~--~~-~~~~v~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~ 107 (387)
T PRK08960 31 GHDVIHLEIGEPD--FT-TAEPIVAAGQAALAAGHTRYTAARGLPALREAIAGFYAQRYGVDVDPERILVTPGGSGALLL 107 (387)
T ss_pred CCCeEEeCCCCCC--CC-CCHHHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccCcHHHHHH
Confidence 4457887776653 33 4789999998887642 12122223344555555555432 3456789999999999999
Q ss_pred HHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCC
Q 011777 171 AMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSG 250 (477)
Q Consensus 171 Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~ 250 (477)
++.+.. .+++.|++.+++|.++.......+. .+..++.. ....+..| .++++++++ ++
T Consensus 108 ~~~~~~--~~gd~vlv~~p~y~~~~~~~~~~g~-----------~~~~v~~~--~~~~~~~d----~~~l~~~~~---~~ 165 (387)
T PRK08960 108 ASSLLV--DPGKHWLLADPGYPCNRHFLRLVEG-----------AAQLVPVG--PDSRYQLT----PALVERHWN---AD 165 (387)
T ss_pred HHHHhc--CCCCEEEEcCCCCcchHHHHHhcCC-----------eEEEEecC--cccCCCCC----HHHHHHHhC---cc
Confidence 887653 3668899999999887554332211 12222221 11112212 466777665 23
Q ss_pred CeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCccee---eeccccc-Cc
Q 011777 251 KVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIV---TMAKGIG-NG 326 (477)
Q Consensus 251 ~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDiv---t~sK~lg-~G 326 (477)
...++++.| +|++| ...+.+.+++|.++|++||+++|+||+|.+|...+ .... .....++++ +|||.+| .|
T Consensus 166 ~~~i~i~~p-~NPtG-~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~-~~~~--~~~~~~~vi~~~S~SK~~g~~G 240 (387)
T PRK08960 166 TVGALVASP-ANPTG-TLLSRDELAALSQALRARGGHLVVDEIYHGLTYGV-DAAS--VLEVDDDAFVLNSFSKYFGMTG 240 (387)
T ss_pred ceEEEEECC-CCCCC-cCcCHHHHHHHHHHHHHcCCEEEEEccccccccCC-CCCC--hhhccCCEEEEeecccccCCcc
Confidence 445566666 45666 45688889999999999999999999999885543 2211 122334544 5999998 69
Q ss_pred cceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCcee-eeccc
Q 011777 327 LPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGD-VRGRG 405 (477)
Q Consensus 327 ~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~-v~g~g 405 (477)
+|+||+++++++++.+.......+.+.+.+.+.++.++++. ..+++.++.++..+..++.+.+...+++.... .+..|
T Consensus 241 lRiG~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~-~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~ 319 (387)
T PRK08960 241 WRLGWLVAPPAAVPELEKLAQNLYISASTPAQHAALACFEP-ETLAILEARRAEFARRRDFLLPALRELGFGIAVEPQGA 319 (387)
T ss_pred cEEEEEEcCHHHHHHHHHHHhhhccCCCHHHHHHHHHHhhc-CcHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCcCCCee
Confidence 99999999999998877654445667788999888888752 11233444333333334444444444443222 23346
Q ss_pred eeEEEEEeeCCCCCCccHHHHHHHHHHHH-HcCceeeccCCC-----CCEEEEeCCCCCcHHHHHHHHHHHHHHHh
Q 011777 406 LMVGMELVTDRKEKTPAKAETAVLFEKLR-ELGVLVGKGGLH-----GNVFRIKPPMCFTKDDADFLVDALDYSMS 475 (477)
Q Consensus 406 ~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~-----~~~iRi~p~~~~t~e~i~~~l~~l~~~l~ 475 (477)
+++|+++.... . ...++++.|+ ++||.+.|+..+ ++++|++... +.+++.+++++|.+++.
T Consensus 320 ~f~~~~~~~~~----~---~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~~--~~~~l~~al~~l~~~~~ 386 (387)
T PRK08960 320 FYLYADISAFG----G---DAFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYTQ--SLPRLQEAVERIARGLR 386 (387)
T ss_pred EEEEEeccccC----C---CHHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEecC--CHHHHHHHHHHHHHHHh
Confidence 77788773210 1 1345776665 689999987332 3689998663 78999999999988764
No 121
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.94 E-value=1.6e-25 Score=224.51 Aligned_cols=323 Identities=11% Similarity=0.109 Sum_probs=222.5
Q ss_pred CCEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHH
Q 011777 95 GRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLM 174 (477)
Q Consensus 95 G~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ 174 (477)
++..+|+..|. +++| .+|++++++.+.+.... .|+.....+|++.|+++++.+.++|++++|++|++..+++.
T Consensus 28 ~~~~i~l~~ne--n~~~-~~~~v~~a~~~~~~~~~----~Yp~~g~~~Lr~aia~~~~~~~~~I~vt~Gs~e~i~~~~~~ 100 (366)
T PRK01533 28 DHSFVKLASNE--NPFG-CSPRVLDELQKSWLDHA----LYPDGGATTLRQTIANKLHVKMEQVLCGSGLDEVIQIISRA 100 (366)
T ss_pred CCceEEeCCCC--CCCC-CCHHHHHHHHHHHHhcC----cCCCCCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHH
Confidence 45788887765 3566 57899999988765432 35555567889999998887888999999999999998886
Q ss_pred HHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeE
Q 011777 175 ARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAG 254 (477)
Q Consensus 175 ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~ 254 (477)
... +++.|++.+++|.++...+... |...+.+|.. ...++ ++++++.++ +++++
T Consensus 101 l~~--~gd~vlv~~P~y~~~~~~~~~~-------------g~~v~~v~~~-~~~~d------~~~l~~~~~----~~~~~ 154 (366)
T PRK01533 101 VLK--AGDNIVTAGATFPQYRHHAIIE-------------GCEVKEVALN-NGVYD------LDEISSVVD----NDTKI 154 (366)
T ss_pred hcC--CCCEEEEcCCcHHHHHHHHHHc-------------CCEEEEeecC-CCCcC------HHHHHHHhC----cCCcE
Confidence 532 5678999999998775543322 2222222221 11111 467777665 23444
Q ss_pred EEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccc---cCCCcceeeeccccc-CccceE
Q 011777 255 FIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFET---QGVIPDIVTMAKGIG-NGLPLG 330 (477)
Q Consensus 255 vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~---~gv~pDivt~sK~lg-~G~pig 330 (477)
+++...+|++|. ..+.+.+++|.++|++++ ++|+||+|..|...+........ .+...-+-+|||.+| .|+|+|
T Consensus 155 v~i~~P~NPTG~-~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG 232 (366)
T PRK01533 155 VWICNPNNPTGT-YVNDRKLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVG 232 (366)
T ss_pred EEEeCCCCCCCC-CcCHHHHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHh
Confidence 444444666774 557888899999998877 56779999877543211111111 112222337999999 799999
Q ss_pred EEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEE
Q 011777 331 AVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGM 410 (477)
Q Consensus 331 ~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i 410 (477)
|+++++++++.+.... .+++.|.+++.++.++|+ ++++.++.++.....++++.+.....+ +...++.|.|+++
T Consensus 233 ~~i~~~~~~~~l~~~~--~~~~~~~~~q~aa~~~l~---~~~~~~~~~~~~~~~r~~~~~~l~~~g-~~~~~~~~nf~~~ 306 (366)
T PRK01533 233 YAVGHEELIEKLNVVR--LPFNVSSLAQKAATIAFG---DDEFIEEIVRVNTEGLRQYESFCKENE-IPFYQSQTNFIFL 306 (366)
T ss_pred HHhCCHHHHHHHHHhc--CCCCcCHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHHhCC-CccCCCcCcEEEE
Confidence 9999999999887543 467889999999999885 345555555555555555655555444 2334567889898
Q ss_pred EEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHHHh
Q 011777 411 ELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADFLVDALDYSMS 475 (477)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~ 475 (477)
.+. . ...+.+.|+++||.+++. .+++||+ ..+.+++++++++|+++++
T Consensus 307 ~~~--------~---~~~~~~~l~~~GI~Vr~~---~~~iRis---~~~~~~~~~l~~al~~~~~ 354 (366)
T PRK01533 307 PVE--------N---GGEIYEACAHAGFIIRPF---PNGVRIT---VGTREQNEGVISVLQQHFE 354 (366)
T ss_pred eCC--------C---HHHHHHHHHHCCcEEccC---CCceEEe---CCCHHHHHHHHHHHHHHHH
Confidence 762 1 346888999999999973 5789994 5688999999999998875
No 122
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.94 E-value=8.6e-25 Score=218.47 Aligned_cols=337 Identities=11% Similarity=0.022 Sum_probs=211.8
Q ss_pred EEEeecCCcccccCCCCCHHHHHHHHHHHhhcc-ccccccCChHHHHHHHHHHhhCC--CCCC-EEEEeCChHHHHHHHH
Q 011777 97 RYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQ-HATTIYLHHAIADFAEALASKMP--GNLK-VVYFVNSGTEANELAM 172 (477)
Q Consensus 97 ~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~-~~~~~~~~~~~~~l~~~La~~~~--~~~~-~v~~~~sGseA~~~Al 172 (477)
+.+||..|.. .++ ..|++.+++.+...... |....+..+.+..+++.+.+..+ .+.+ +|++|+|+++|+..++
T Consensus 1 ~~~~~~~g~p--~~~-~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~ 77 (350)
T TIGR03537 1 RLFDFGTGDP--KEP-TPPFIRKALIDAVPEVSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFP 77 (350)
T ss_pred CeEeccCCCC--CCC-CCHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHH
Confidence 3578887775 344 37889999988764322 11112223445566666655433 4455 8999999999999887
Q ss_pred HHHHhcc-CCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCC
Q 011777 173 LMARLST-GNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGK 251 (477)
Q Consensus 173 ~~ar~~~-~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~ 251 (477)
....... +++.|++.+++|.++...+... |...++++......+..| .++++++++ ++
T Consensus 78 ~~~~~~g~~~d~Vl~~~p~y~~~~~~~~~~-------------g~~~~~v~~~~~~~~~~d----~~~l~~~~~----~~ 136 (350)
T TIGR03537 78 LVFIDPEEDRRRVIFGTPGYPVYERGALFA-------------GGEPTAVKLKKEDGFLLR----LEKVEKSIL----EE 136 (350)
T ss_pred HHHcCCCCCCceEEEcCCCCcchHHHHHhc-------------CCEEEEcccCcccCCccC----HHHHHHhhh----hc
Confidence 7553211 1268999999998876655433 233333332211222212 477777765 24
Q ss_pred eeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCC--Ccceeeeccccc-Cccc
Q 011777 252 VAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGV--IPDIVTMAKGIG-NGLP 328 (477)
Q Consensus 252 ~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv--~pDivt~sK~lg-~G~p 328 (477)
++++++.+.+|++| ...+.+.+++|.++|++||+++|+||+|..+...+ ........+. ..-+.+|||.+| .|+|
T Consensus 137 ~~~i~i~~p~NPtG-~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~~~~i~~~s~SK~~g~~GlR 214 (350)
T TIGR03537 137 TKIVWINYPHNPTG-ATAPRSYLKETIAMCREHGIILCSDECYTEIYFGE-PPHSALEVGIENVLAFHSLSKRSGMTGYR 214 (350)
T ss_pred cEEEEEeCCCCCcC-cccCHHHHHHHHHHHHHcCcEEEEeccccccccCC-CCCchhhcCcCCEEEEeecccccCCcccc
Confidence 56666666677777 55688889999999999999999999998664332 2211111111 122336899997 5999
Q ss_pred eEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeE
Q 011777 329 LGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMV 408 (477)
Q Consensus 329 ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~ 408 (477)
+||+++++++.+.+.......+.+.+++.+.++.+++. .+++.++.++..+..++.+.+...+++........|+++
T Consensus 215 iG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~---~~~~~~~~r~~l~~~~~~~~~~l~~~g~~~~~~~g~~~~ 291 (350)
T TIGR03537 215 SGFVAGDEKLISFLRKLRANFGVASPDFVQAAAKAAWS---DDNHVLERRKIFKRKRDLFIEFFNKVGLEYLYPDATFYL 291 (350)
T ss_pred ceeeecCHHHHHHHHHHHHhhccCCCHHHHHHHHHHhC---CcHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCeEEEE
Confidence 99999999998887765433445566677777777664 233333333333333444444333444321222235567
Q ss_pred EEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCC----CCEEEEeCCCCCcHHHHHHHHHHHHH
Q 011777 409 GMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLH----GNVFRIKPPMCFTKDDADFLVDALDY 472 (477)
Q Consensus 409 ~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~----~~~iRi~p~~~~t~e~i~~~l~~l~~ 472 (477)
|+++... ....++.+.|.++||.+.++..+ .+++|++. ..+++++++++++|++
T Consensus 292 ~~~~~~~--------~~~~~l~~~L~~~gv~v~~g~~f~~~~~~~~Ri~~--~~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 292 WVKVPSG--------IDAKDYALRLLENGIVVAPGENFGSGEEGYVRVAL--VPTLEECEEALRLWER 349 (350)
T ss_pred EEECCCC--------CCHHHHHHHHHHCCEEEcCchhhCCCCCCEEEEEe--cCCHHHHHHHHHHHhc
Confidence 7776321 12457888899999999987543 47899964 4688999999998875
No 123
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.94 E-value=1.3e-24 Score=220.94 Aligned_cols=341 Identities=12% Similarity=0.012 Sum_probs=213.0
Q ss_pred CCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhcc-ccccccCChHHHHHHHHHHhhCC---CCC-CEEEEeCChHHHH
Q 011777 94 NGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQ-HATTIYLHHAIADFAEALASKMP---GNL-KVVYFVNSGTEAN 168 (477)
Q Consensus 94 dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~-~~~~~~~~~~~~~l~~~La~~~~---~~~-~~v~~~~sGseA~ 168 (477)
.|+.++|+..|... ++ .++.+.+++.+.+.... |....+..+.+..+++.+.+.++ .+. ++|++|+|+++|+
T Consensus 27 ~~~~~i~l~~~~p~--~~-~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al 103 (396)
T PRK09147 27 ADLPPISLSIGEPK--HP-TPAFIKDALAANLDGLASYPTTAGLPALREAIAAWLERRYGLPALDPATQVLPVNGSREAL 103 (396)
T ss_pred cCCCeEecCCCCCC--CC-CCHHHHHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHHHHhCCCcCCccceEEECCChHHHH
Confidence 47888998887753 43 46788999887665422 22222334556667776665544 344 3899999999999
Q ss_pred HHHHHHHHhc-cCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhcc
Q 011777 169 ELAMLMARLS-TGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFG 247 (477)
Q Consensus 169 ~~Al~~ar~~-~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~ 247 (477)
..+++..... ..++.|++.+++|.++....... |...+.+|......|..| .+++++.+.
T Consensus 104 ~~~~~~l~~~~~~gd~vlv~~P~y~~~~~~~~~~-------------g~~~~~vp~~~~~~~~~d----~~~l~~~~~-- 164 (396)
T PRK09147 104 FAFAQTVIDRDGPGPLVVCPNPFYQIYEGAALLA-------------GAEPYFLNCDPANNFAPD----FDAVPAEVW-- 164 (396)
T ss_pred HHHHHHHcCCCCCCCEEEEcCCCccchHHHHHhc-------------CCEEEEeccCccccCccC----HHHHHHHHh--
Confidence 9988865432 11567999999998775443322 222333322111112222 356666554
Q ss_pred CCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCC-CCcc-c---ccc-----CCCccee
Q 011777 248 TSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGS-HYWG-F---ETQ-----GVIPDIV 317 (477)
Q Consensus 248 ~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~-~~~~-~---~~~-----gv~pDiv 317 (477)
.+++++++...+|++| .+.+++.+++|.++|++|+++||+||+|..|.+.+. .... . ... +...-+-
T Consensus 165 --~~~k~i~l~nP~NPTG-~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~ 241 (396)
T PRK09147 165 --ARTQLLFVCSPGNPTG-AVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFH 241 (396)
T ss_pred --hccEEEEEcCCCCCcC-ccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEe
Confidence 2455555544466667 566899999999999999999999999998754441 1111 1 011 1122234
Q ss_pred eeccccc-CccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCC
Q 011777 318 TMAKGIG-NGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHD 396 (477)
Q Consensus 318 t~sK~lg-~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~ 396 (477)
+|||.++ .|+|+||+++++++++.+.......+++.+++.+.++.+.+. .++++++.++..+..++.+.+...++
T Consensus 242 S~SK~~~~~GlRiG~~~~~~~l~~~~~~~~~~~~~~~~~~~q~a~~~~~~---~~~~~~~~~~~~~~~~~~~~~~L~~~- 317 (396)
T PRK09147 242 SLSKRSNVPGLRSGFVAGDAALLKKFLLYRTYHGCAMPPAVQAASIAAWN---DEAHVRENRALYREKFDAVTPILAPV- 317 (396)
T ss_pred ccccccCCccceeeeecCCHHHHHHHHHHhhhcccCCCHHHHHHHHHHhc---chhHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 7999987 599999999999999887654444556778888888877763 23333333322222222232222222
Q ss_pred CceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHH-HcCceeeccCCC----------CCEEEEeCCCCCcHHHHHH
Q 011777 397 IIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLR-ELGVLVGKGGLH----------GNVFRIKPPMCFTKDDADF 465 (477)
Q Consensus 397 ~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~----------~~~iRi~p~~~~t~e~i~~ 465 (477)
.....+..|+++|+++.. ....+.+.|+ ++||.+.|+..+ .+++||++. .+++++++
T Consensus 318 ~~~~~p~~g~f~~~~~~~----------~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~--~~~~~l~~ 385 (396)
T PRK09147 318 LDVQLPDAGFYLWAKVPG----------DDTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALV--APLAECVE 385 (396)
T ss_pred cCCCCCCeeEEEEEECCC----------CHHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEec--CCHHHHHH
Confidence 111223457888888730 1245666665 679999887432 368999654 57899999
Q ss_pred HHHHHHHHHh
Q 011777 466 LVDALDYSMS 475 (477)
Q Consensus 466 ~l~~l~~~l~ 475 (477)
++++|.+++.
T Consensus 386 ~l~rl~~~~~ 395 (396)
T PRK09147 386 AAERIVDFCR 395 (396)
T ss_pred HHHHHHHHhc
Confidence 9999998774
No 124
>PRK09148 aminotransferase; Validated
Probab=99.94 E-value=9.1e-25 Score=222.33 Aligned_cols=347 Identities=12% Similarity=0.025 Sum_probs=216.1
Q ss_pred CCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhc---cccccccCChHHHHHHHHHHhhCC--CCCC-EEEEeCChHHH
Q 011777 94 NGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLL---QHATTIYLHHAIADFAEALASKMP--GNLK-VVYFVNSGTEA 167 (477)
Q Consensus 94 dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~---~~~~~~~~~~~~~~l~~~La~~~~--~~~~-~v~~~~sGseA 167 (477)
.|+.+|||..|.. .++ .++.+.+++.+.+... .|....+..+.+..+++.+.+..+ .+.+ +|++|+|++++
T Consensus 28 ~~~~~i~l~~~~p--~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~a 104 (405)
T PRK09148 28 AGADIIDLGMGNP--DLP-TPQHIVDKLCETAQDPRTHRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKEG 104 (405)
T ss_pred cCCCeEEcCCCCC--CCC-CCHHHHHHHHHHHcCcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHH
Confidence 4667899877654 344 3678888888766431 111112233445566666654433 3345 79999999999
Q ss_pred HHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhcc
Q 011777 168 NELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFG 247 (477)
Q Consensus 168 ~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~ 247 (477)
+..+++.... +++.|++.+++|.++....... |...+++|......+ .++++++++..
T Consensus 105 l~~~~~~l~~--~gd~Vl~~~P~y~~~~~~~~~~-------------g~~v~~v~~~~~~~~-------~~~l~~~~~~~ 162 (405)
T PRK09148 105 FANMAQAITA--PGDVILCPNPSYPIHAFGFIMA-------------GGVIRSVPAEPDEEF-------FPALERAVRHS 162 (405)
T ss_pred HHHHHHHhcC--CCCEEEEcCCCCcccHHHHHhc-------------CCEEEEEeCCCCCCC-------ccCHHHHHhhc
Confidence 9998886533 5678999999999875443322 222222222111111 24555555432
Q ss_pred CCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccc-cc---cCCCcceeeecccc
Q 011777 248 TSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGF-ET---QGVIPDIVTMAKGI 323 (477)
Q Consensus 248 ~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~-~~---~gv~pDivt~sK~l 323 (477)
.+ ++.++++...+|++| ..++.+.+++|.++|++||+++|+||+|..|.+.+...-.. .. .+....+-+|||.+
T Consensus 163 ~~-~~~~v~l~~P~NPtG-~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~ 240 (405)
T PRK09148 163 IP-KPIALIVNYPSNPTA-YVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTF 240 (405)
T ss_pred cc-cceEEEEeCCCCCCC-cCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEecccccc
Confidence 23 444444444355666 55688999999999999999999999999875544111111 11 11222344799999
Q ss_pred c-CccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeee
Q 011777 324 G-NGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVR 402 (477)
Q Consensus 324 g-~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~ 402 (477)
+ .|+|+||+++++++++.+.......+++.+.+++.++.+.|+. .+++.++.++..+..++.+.+...+++.....+
T Consensus 241 ~~pGlR~G~~v~~~~~i~~l~~~~~~~~~~~~~~~q~~~~~~L~~--~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p 318 (405)
T PRK09148 241 SMAGWRMGFAVGNERLIAALTRVKSYLDYGAFTPIQVAATAALNG--PQDCIAEMRELYKKRRDVLVESFGRAGWDIPPP 318 (405)
T ss_pred CCcchheeeeeCCHHHHHHHHHHHHHhccCCChHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCC
Confidence 9 7999999999999998887654445667788888888888753 233444433333333333333333344322223
Q ss_pred ccceeEEEEEeeCCCCCCccHHHHHHHHHHHH-HcCceeeccCCC----CCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 403 GRGLMVGMELVTDRKEKTPAKAETAVLFEKLR-ELGVLVGKGGLH----GNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 403 g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~----~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
..|+++|+++..... .....++.+.|+ ++||.+.|+..+ .+++||+.. .+++++++++++|.+++.+
T Consensus 319 ~~g~f~~~~l~~~~~-----~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~~--~~~~~l~~al~~l~~~l~~ 390 (405)
T PRK09148 319 AASMFAWAPIPEAFR-----HLGSLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIALV--ENEQRIRQAARNIKRFLSS 390 (405)
T ss_pred CeeEEEEEECCCccC-----CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHH
Confidence 456788887632110 001345666655 689999997432 368999764 6889999999999988754
No 125
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=4.8e-25 Score=221.71 Aligned_cols=326 Identities=16% Similarity=0.136 Sum_probs=219.0
Q ss_pred EEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHH
Q 011777 97 RYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMAR 176 (477)
Q Consensus 97 ~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar 176 (477)
.++++..|.. .+| .+|++.+++.+.+.... .|..+...+|++.|+++++.+.++|++++|+++++..+++...
T Consensus 33 ~~~~l~~~~~--~~~-~~~~~~~a~~~~~~~~~----~Y~~~~~~~Lr~~ia~~~~~~~~~I~it~G~~~~l~~~~~~~~ 105 (369)
T PRK08153 33 FRARIGANES--GFG-PSPSVIAAMREAAAEIW----KYGDPENHDLRHALAAHHGVAPENIMVGEGIDGLLGLIVRLYV 105 (369)
T ss_pred ceeEecCCCC--CCC-CCHHHHHHHHHHHHHhh----cCCCCccHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhc
Confidence 4578776653 455 57899999988765321 2333346788899999887767899999999999999888553
Q ss_pred hccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEE
Q 011777 177 LSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFI 256 (477)
Q Consensus 177 ~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi 256 (477)
.+++.|++.+++|++........ |...+.+|. ... ..| ++++++.+. ..++++++
T Consensus 106 --~~gd~vlv~~p~y~~~~~~~~~~-------------g~~~~~vp~--~~~-~~~----~~~l~~~~~---~~~~~~i~ 160 (369)
T PRK08153 106 --EPGDPVVTSLGAYPTFNYHVAGF-------------GGRLVTVPY--RDD-RED----LDALLDAAR---RENAPLVY 160 (369)
T ss_pred --CCCCEEEECCCcchHHHHHHHHc-------------CCeEEEeeC--CCC-CCC----HHHHHHHhc---ccCCcEEE
Confidence 35678999999998765332222 112222221 000 011 344443332 23455554
Q ss_pred e-cccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCcc---eeeeccccc-CccceEE
Q 011777 257 A-ETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPD---IVTMAKGIG-NGLPLGA 331 (477)
Q Consensus 257 ~-epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pD---ivt~sK~lg-~G~pig~ 331 (477)
+ +| ++++|. ..+.+.+++|.++|+ ++++||+||+|..|++.| ....+.. ..++ +-||||.+| .|+|+||
T Consensus 161 l~~P-~NPtG~-~~~~~~l~~l~~~~~-~~~~lI~DE~y~~~~~~~-~~~~~~~--~~~~~i~~~SfSK~~g~~GlRiG~ 234 (369)
T PRK08153 161 LANP-DNPMGS-WHPAADIVAFIEALP-ETTLLVLDEAYCETAPAG-AAPPIDT--DDPNVIRMRTFSKAYGLAGARVGY 234 (369)
T ss_pred EeCC-CCCCCC-CCCHHHHHHHHHhCC-CCcEEEEeCchhhhcCcc-cchhhhh--cCCCEEEEecchHhccCcchheee
Confidence 4 66 444564 557777888888887 499999999999987655 3322221 2234 337999999 7999999
Q ss_pred EEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEE
Q 011777 332 VVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGME 411 (477)
Q Consensus 332 v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~ 411 (477)
+++++++++.+.... .+++.|++++.++.++|+ ++++.++.++..+..++.+.+..++.+. ...+..|.+++++
T Consensus 235 ~v~~~~~~~~l~~~~--~~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~r~~~~~~L~~~g~-~~~p~~~~f~~~~ 308 (369)
T PRK08153 235 AIGAPGTIKAFDKVR--NHFGMNRIAQAAALAALK---DQAYLAEVVGKIAAARDRIAAIARANGL-TPLPSATNFVAID 308 (369)
T ss_pred eecCHHHHHHHHHhh--cCCCCCHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHHHHCCC-ccCCCcCcEEEEE
Confidence 999999998876543 457889999999999885 3455666666666666766665555553 2334567777776
Q ss_pred EeeCCCCCCccHHHHHHHHHHHHHcCceee-ccCC-CCCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 412 LVTDRKEKTPAKAETAVLFEKLRELGVLVG-KGGL-HGNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~-~~~~-~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
+.. .......+.+.|+++||.+. ++.. ..+++|++.. ++++++.++++|++++..
T Consensus 309 ~~~-------~~~~a~~l~~~l~~~Gi~v~~p~~~~~~~~iRis~~---~~~~~~~~~~al~~~~~~ 365 (369)
T PRK08153 309 CGR-------DGAFARAVLDGLIARDIFVRMPGVAPLDRCIRVSCG---PDEELDLFAEALPEALEA 365 (369)
T ss_pred CCC-------CcccHHHHHHHHHHCCeEEeeCCCCCCCCeEEEecC---CHHHHHHHHHHHHHHHHH
Confidence 521 11235678889999999995 4422 2468999644 799999999999998753
No 126
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.94 E-value=1.1e-24 Score=221.24 Aligned_cols=348 Identities=14% Similarity=0.072 Sum_probs=215.3
Q ss_pred CCEEEeecCCcccccCCCCCHHHHHHHHHHHhhcc--ccccccCChHHHHHHHHHHhhCC--CCCCEEEEeCChHHHHHH
Q 011777 95 GRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQ--HATTIYLHHAIADFAEALASKMP--GNLKVVYFVNSGTEANEL 170 (477)
Q Consensus 95 G~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~--~~~~~~~~~~~~~l~~~La~~~~--~~~~~v~~~~sGseA~~~ 170 (477)
+..++||..|... ++ .++++.+++.+.+.... +....+....+..+++.+.+..+ .+.+++++++|+++|+..
T Consensus 30 ~~~~~~l~~~~~~--~~-~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~ 106 (393)
T PRK05764 30 GRDVISLGAGEPD--FD-TPEHIKEAAIEALDDGKTKYTPAAGIPELREAIAAKLKRDNGLDYDPSQVIVTTGAKQALYN 106 (393)
T ss_pred cCCEEEeCCCCCC--CC-CCHHHHHHHHHHHhcCCCCcCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEeCCcHHHHHH
Confidence 3457888887753 32 57899999988776422 11111122334444544443322 345689999999999999
Q ss_pred HHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCC
Q 011777 171 AMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSG 250 (477)
Q Consensus 171 Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~ 250 (477)
++..... .++.|++.+++|.++...+... |...+.++......+..| .+++++.++ +
T Consensus 107 ~~~~~~~--~gd~vl~~~p~y~~~~~~~~~~-------------g~~~~~~~~~~~~~~~~d----~~~l~~~l~----~ 163 (393)
T PRK05764 107 AFMALLD--PGDEVIIPAPYWVSYPEMVKLA-------------GGVPVFVPTGEENGFKLT----VEQLEAAIT----P 163 (393)
T ss_pred HHHHhcC--CCCEEEecCCCCcchHHHHHHc-------------CCEEEEEecCcccCCcCC----HHHHHHhhC----c
Confidence 8886533 5678999999988764443222 222222222111112111 366777664 2
Q ss_pred CeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCcccc-----ccCCCcceeeeccccc-
Q 011777 251 KVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFE-----TQGVIPDIVTMAKGIG- 324 (477)
Q Consensus 251 ~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~-----~~gv~pDivt~sK~lg- 324 (477)
++++|++...++++|. ..+.+.+++|.++|++||+++|+||+|..|...+..+.+.. ..+....+.+|||.++
T Consensus 164 ~~~~v~~~~p~NPtG~-~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~ 242 (393)
T PRK05764 164 KTKALILNSPSNPTGA-VYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAYAM 242 (393)
T ss_pred cceEEEEECCCCCCCc-ccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCcccccC
Confidence 4445444444566674 45778899999999999999999999988755442111221 1122223346999999
Q ss_pred CccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeecc
Q 011777 325 NGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGR 404 (477)
Q Consensus 325 ~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~ 404 (477)
.|+|+||+++++++++.+.......+++.+++++.++.+.|+. .+++.++.++..+..++.+.+...+++.+...++.
T Consensus 243 ~G~RiG~i~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~ 320 (393)
T PRK05764 243 TGWRLGYAAGPKELIKAMSKLQSHSTSNPTSIAQYAAVAALNG--PQDEVEEMRQAFEERRDLMVDGLNEIPGLECPKPE 320 (393)
T ss_pred ccceeEEEecCHHHHHHHHHHHhhcccCCChHHHHHHHHHHcC--ChHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCCC
Confidence 7999999999999998887554445667788998888888862 22333344443333344444444444223333344
Q ss_pred c-eeEEEEEeeCCCCCCccHHHHHHHHHHHH-HcCceeeccCCCC--CEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 405 G-LMVGMELVTDRKEKTPAKAETAVLFEKLR-ELGVLVGKGGLHG--NVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 405 g-~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~~--~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
| .++|+.+..... .......++.+.++ ++||.+.++..++ +++||+ +..+++++++++++|.+++++
T Consensus 321 g~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~vRis--~~~~~~~~~~~i~~l~~~~~~ 391 (393)
T PRK05764 321 GAFYVFPNVSKLLG---KSITDSLEFAEALLEEAGVAVVPGIAFGAPGYVRLS--YATSLEDLEEGLERIERFLES 391 (393)
T ss_pred cceEEEEecccccc---cccCCHHHHHHHHHHhCCEEEccccccCCCCEEEEE--ecCCHHHHHHHHHHHHHHHHh
Confidence 4 566776642110 00001346666664 5799999875443 799996 456899999999999998865
No 127
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.94 E-value=9e-25 Score=215.84 Aligned_cols=324 Identities=19% Similarity=0.196 Sum_probs=228.2
Q ss_pred EEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCC-CCCCEEEEeCChHHHHHHHHHHH
Q 011777 97 RYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMP-GNLKVVYFVNSGTEANELAMLMA 175 (477)
Q Consensus 97 ~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~-~~~~~v~~~~sGseA~~~Al~~a 175 (477)
..+|+.++. +++| .+|.+.+++.+.++.+ ..|+++...++.+.+++++. .+.+.|+.+||.+|.++..+++.
T Consensus 23 ~~i~LssNe--nP~g-p~~~~~~~~~~~~~~~----~rYPd~~~~~l~~a~a~~~~~~~~~~V~~gnGsde~i~~l~~~~ 95 (356)
T COG0079 23 GIIKLSSNE--NPYG-PPPKVIEAIRAALDKL----NRYPDPDYRELRAALAEYYGVVDPENVLVGNGSDELIELLVRAF 95 (356)
T ss_pred cceeecCCC--CCCC-CCHHHHHHHHHHHHhh----ccCCCCcHHHHHHHHHHHhCCCCcceEEEcCChHHHHHHHHHHh
Confidence 688888876 4677 4589999998887743 35777788899999999987 66689999999999999999876
Q ss_pred HhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEE
Q 011777 176 RLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGF 255 (477)
Q Consensus 176 r~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~v 255 (477)
.. +++.|++..++|.-+...+...+. .+..++... |..| ++.+.+.+. .+....+
T Consensus 96 ~~--~gd~vl~~~Ptf~~Y~~~a~~~g~-----------~~~~v~~~~-----~~~d----~~~~~~~~~---~~~~lv~ 150 (356)
T COG0079 96 VE--PGDTVLIPEPTFSMYEIAAQLAGA-----------EVVKVPLKE-----FRLD----LDAILAAIR---DKTKLVF 150 (356)
T ss_pred hc--CCCEEEEcCCChHHHHHHHHhcCC-----------eEEEecccc-----cccC----HHHHHHhhh---cCCCEEE
Confidence 54 458999999999766555444432 122222211 2222 244444444 2233466
Q ss_pred EecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCccee---eeccccc-CccceEE
Q 011777 256 IAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIV---TMAKGIG-NGLPLGA 331 (477)
Q Consensus 256 i~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDiv---t~sK~lg-~G~pig~ 331 (477)
+++|+|++| ...+.+.++++.+.|.+ +++||+||+|..|... .. .....-.++++ ||||++| .|+|+||
T Consensus 151 i~nPNNPTG--~~~~~~~l~~l~~~~~~-~~~vVvDEAY~eF~~~--~~--~~l~~~~~nlivlRTfSKa~gLAGlRlGy 223 (356)
T COG0079 151 LCNPNNPTG--TLLPREELRALLEALPE-GGLVVIDEAYIEFSPE--SS--LELLKYPPNLIVLRTFSKAFGLAGLRVGY 223 (356)
T ss_pred EeCCCCCCC--CCCCHHHHHHHHHhCCC-CcEEEEeCchhhcCCc--hh--hhhccCCCCEEEEEecHHhhhcchhceee
Confidence 666766655 34567778888888887 9999999999998651 12 12222223244 7999999 6999999
Q ss_pred EEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEE
Q 011777 332 VVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGME 411 (477)
Q Consensus 332 v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~ 411 (477)
+++++++++.+.+.. ..|+.|.++++++.++++. +++++...+....-+++|.+...+.+.....+..+.|+.++
T Consensus 224 ~ia~~~~i~~l~~vr--~p~~v~~~a~~aa~aal~~---~~~~~~~~~~~~~~r~rl~~~l~~~~~~~v~pS~aNFvlv~ 298 (356)
T COG0079 224 AIANPELIAALNKVR--PPFNVSSPALAAAIAALRD---ADYLEESVERIREERERLYAALKALGLFGVFPSQANFVLVR 298 (356)
T ss_pred ccCCHHHHHHHHHhc--CCCCCCHHHHHHHHHHccc---HHHHHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcEEEEE
Confidence 999999999998654 6788899999999998864 24444444444444555555444455222445568888887
Q ss_pred EeeCCCCCCccHHHHHHHHHHHHHcCceeeccCC---CCCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 412 LVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGL---HGNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~---~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
+. ... ...+.+.|+++||+++.... ..+++|| .+-|++|.++++++|.++++.
T Consensus 299 ~~--------~~~-~~~l~~~L~~~giivR~~~~~~~~~~~lRi---tvgt~een~~ll~AL~~~~~~ 354 (356)
T COG0079 299 VP--------DAE-AAALAEALLKKGILVRDCSSVGLLPGYLRI---TVGTPEENDRLLAALREVLKG 354 (356)
T ss_pred CC--------Ccc-HHHHHHHHHHCCEEEEeCCCCCCCCCeEEE---EeCCHHHHHHHHHHHHHHHhc
Confidence 63 222 45789999999999998743 3469999 556889999999999998764
No 128
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.94 E-value=1.7e-24 Score=220.08 Aligned_cols=350 Identities=12% Similarity=0.053 Sum_probs=216.2
Q ss_pred CCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhcc-c-cccccCChHHHHHHHHHHhhCC---CCCC-EEEEeCChHHH
Q 011777 94 NGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQ-H-ATTIYLHHAIADFAEALASKMP---GNLK-VVYFVNSGTEA 167 (477)
Q Consensus 94 dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~-~-~~~~~~~~~~~~l~~~La~~~~---~~~~-~v~~~~sGseA 167 (477)
.|+.++|+..|.. .++ .+|.+.+++.+.+.... + +...+..+.+..+++.+.+..+ .+.+ +|++|+|++++
T Consensus 42 ~~~~~i~L~~g~p--~~~-~~~~~~~~l~~~~~~~~~~~Y~~~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~a 118 (410)
T PRK06290 42 PDMELIDMGVGEP--DEM-ADESVVEVLCEEAKKPENRGYADNGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKPA 118 (410)
T ss_pred CCCCeEEcCCCCC--CCC-CCHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHHHH
Confidence 5667789887764 455 46788888887664321 1 1112233445556665554433 3344 79999999999
Q ss_pred HHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhcc
Q 011777 168 NELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFG 247 (477)
Q Consensus 168 ~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~ 247 (477)
+..++.... .+++.|++..++|.++...+... |...+.+|......+..| ++++++.+.
T Consensus 119 l~~~~~~~~--~~gd~Vlv~~P~y~~~~~~~~~~-------------g~~v~~v~~~~~~~~~~d----~~~l~~~~~-- 177 (410)
T PRK06290 119 LAMLPSCFI--NPGDVTLMTVPGYPVTGTHTKYY-------------GGEVYNLPLLEENNFLPD----LDSIPKDIK-- 177 (410)
T ss_pred HHHHHHHhC--CCCCEEEEeCCCCccHHHHHHHc-------------CCEEEEEecCCCcCCcCC----HHHHHHhhc--
Confidence 999887553 35678999999998865443332 222222222111112111 356666554
Q ss_pred CCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccc-cc---cCCCcceeeecccc
Q 011777 248 TSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGF-ET---QGVIPDIVTMAKGI 323 (477)
Q Consensus 248 ~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~-~~---~gv~pDivt~sK~l 323 (477)
.++++|++...+|++| .+.+.+.+++|.++|++||++||+||+|..|...+ ....+ .. .+...-+-+|||.+
T Consensus 178 --~~~k~i~l~nP~NPTG-~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~-~~~s~~~~~~~~~~~I~i~SfSK~~ 253 (410)
T PRK06290 178 --EKAKLLYLNYPNNPTG-AVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDG-KPLSFLSVPGAKEVGVEIHSLSKAY 253 (410)
T ss_pred --ccceEEEEECCCCCCC-cCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCC-CCcChhcCCCccccEEEEeechhhc
Confidence 2456666664466677 55689999999999999999999999999875433 21111 11 12223344799999
Q ss_pred c-CccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhc-hhhHHHHHHHHHHHHHHHHHHHHHhCCCceee
Q 011777 324 G-NGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVID-KERRQAHCADVGSHLLGRLRTLQERHDIIGDV 401 (477)
Q Consensus 324 g-~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~-~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v 401 (477)
+ .|+|+||+++++++++.+.......+.+.+.+++.++.++|+..+ .++..++++++.+++.+.|+ +++. ...
T Consensus 254 g~~GlRiG~ii~~~~l~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~l~~~L~----~~g~-~~~ 328 (410)
T PRK06290 254 NMTGWRLAFVVGNELIVKAFATVKDNNDSGQFIAIQKAGIYALDHPEITEKIREKYSRRLDKLVKILN----EVGF-KAE 328 (410)
T ss_pred CCchhheEeEEeCHHHHHHHHHHHhccccCCcHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHHHH----hCCC-eec
Confidence 7 699999999999999888765444455556678888878775311 12233444444444444443 3442 222
Q ss_pred ecc-ceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcC-ceeeccCCCCCEEEEeCCC-CCcHHHHHHHHHHHHHHHhhC
Q 011777 402 RGR-GLMVGMELVTDRKEKTPAKAETAVLFEKLRELG-VLVGKGGLHGNVFRIKPPM-CFTKDDADFLVDALDYSMSKL 477 (477)
Q Consensus 402 ~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~G-v~v~~~~~~~~~iRi~p~~-~~t~e~i~~~l~~l~~~l~~l 477 (477)
++. |+++|+.+....... -......++.+.|+++| +++.|+..+++++||+... ..++++.++++++|++.+.++
T Consensus 329 ~p~g~f~l~v~lp~~~~~~-~~~~~~~~~~~~Ll~~~~v~~~p~~~~~~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~~ 406 (410)
T PRK06290 329 MPGGTFYLYVKAPKGTKSG-IKFENAEEFSQYLIKEKLISTVPWDDAGHFLRFSVTFEAKDEEEEDRILEEIKRRLSDV 406 (410)
T ss_pred CCCeeeEEEEECCCccccC-CCCCCHHHHHHHHHHhCCEEEECCccccCeEEEEEEcccccccchhHHHHHHHHHHhhc
Confidence 333 455566663211000 00012457888898886 5556765567899996542 248899999999999998764
No 129
>PRK08068 transaminase; Reviewed
Probab=99.94 E-value=1.9e-24 Score=219.12 Aligned_cols=336 Identities=11% Similarity=0.032 Sum_probs=207.4
Q ss_pred CCEEEeecCCcccccCCCCCHHHHHHHHHHHhhcc---ccccccCChHHHHHHHHHHhhCC--CCCC-EEEEeCChHHHH
Q 011777 95 GRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQ---HATTIYLHHAIADFAEALASKMP--GNLK-VVYFVNSGTEAN 168 (477)
Q Consensus 95 G~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~---~~~~~~~~~~~~~l~~~La~~~~--~~~~-~v~~~~sGseA~ 168 (477)
|..+|||..+.+ -.+.+|.+.+++.+.+.... +....+..+.+.++++.+.+..+ .+.+ +|++|+|+++++
T Consensus 31 ~~~~i~l~~~~p---~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~l 107 (389)
T PRK08068 31 GHDVINLGQGNP---DQPTPEHIVEALQEAAENPANHKYSPFRGYPFLKEAAADFYKREYGVTLDPETEVAILFGGKAGL 107 (389)
T ss_pred CCCeEEecCCCC---CCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHH
Confidence 445788877754 23457889999988876421 11112223445555555543333 3455 799999999999
Q ss_pred HHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccC
Q 011777 169 ELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGT 248 (477)
Q Consensus 169 ~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~ 248 (477)
..++.... .+++.|++.+++|..+....... |...+.+|......+..| .+++++.+.
T Consensus 108 ~~~~~~~~--~~gd~vlv~~P~y~~~~~~~~~~-------------g~~~~~i~~~~~~~~~~d----~~~l~~~~~--- 165 (389)
T PRK08068 108 VELPQCLM--NPGDTILVPDPGYPDYLSGVALA-------------RAQFETMPLIAENNFLPD----YTKIPEEVA--- 165 (389)
T ss_pred HHHHHHhC--CCCCEEEEcCCCCcchHHHHHhc-------------CCEEEEeecccccCCCCC----HHHHHHhcc---
Confidence 98877543 35678999999998765543332 222223222111112111 356666554
Q ss_pred CCCeeEEEec-ccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCcc-ccccCC---Ccceeeecccc
Q 011777 249 SGKVAGFIAE-TIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWG-FETQGV---IPDIVTMAKGI 323 (477)
Q Consensus 249 ~~~~a~vi~e-pi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~-~~~~gv---~pDivt~sK~l 323 (477)
+++++|++. | +|++| ..++.+.+++|.++|++||+++|+||+|..|.+.+..... ....+. ...+-+|||.+
T Consensus 166 -~~~~~v~l~~P-~NPTG-~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~ 242 (389)
T PRK08068 166 -EKAKLMYLNYP-NNPTG-AVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTF 242 (389)
T ss_pred -ccceEEEEECC-CCCCC-CcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhcc
Confidence 234444444 6 56666 5678999999999999999999999999887665411211 122222 22344799999
Q ss_pred c-CccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhch--hhHHHHHHHHHHHHHHHHHHHHHhCCCcee
Q 011777 324 G-NGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDK--ERRQAHCADVGSHLLGRLRTLQERHDIIGD 400 (477)
Q Consensus 324 g-~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~ 400 (477)
| .|+|+||+++++++++.+.........+.+++.+.++.+++....+ +.+.+.++++.+.+.+.|++ ++. ..
T Consensus 243 g~~GlRiG~~~~~~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~----~g~-~~ 317 (389)
T PRK08068 243 NMAGWRVAFAVGNESVIEAINLLQDHLFVSLFGAIQDAAIEALLSDQSCVAELVARYESRRNAFISACRE----IGW-EV 317 (389)
T ss_pred CCccceeEeEecCHHHHHHHHHHHhhccCCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH----CCC-cc
Confidence 8 6999999999999998886544333344455667777666642111 22344444444455444433 342 22
Q ss_pred eeccc-eeEEEEEeeCCCCCCccHHHHHHHHHHHHH-cCceeeccCCC----CCEEEEeCCCCCcHHHHHHHHHHHHHH
Q 011777 401 VRGRG-LMVGMELVTDRKEKTPAKAETAVLFEKLRE-LGVLVGKGGLH----GNVFRIKPPMCFTKDDADFLVDALDYS 473 (477)
Q Consensus 401 v~g~g-~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~~~----~~~iRi~p~~~~t~e~i~~~l~~l~~~ 473 (477)
.++.| +++|+.+... ....++.+.|++ +||.+.++..+ .+++||+.. .+++.+.+++++|.++
T Consensus 318 ~~~~g~~~~~v~~~~~--------~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~--~~~~~l~~al~~l~~~ 386 (389)
T PRK08068 318 DAPKGSFFAWMPVPKG--------YTSEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVGLL--TDEERLREAVERIGKL 386 (389)
T ss_pred cCCCeeEEEEEECCCC--------CCHHHHHHHHHHhCCEEEecchHhCccCCCeEEEEEc--CCHHHHHHHHHHHHHh
Confidence 33444 5568876321 124578888886 69999987322 368999764 5778899988888753
No 130
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.94 E-value=9.5e-25 Score=221.47 Aligned_cols=346 Identities=14% Similarity=0.053 Sum_probs=215.2
Q ss_pred CEEEeecCCcccccCCCCCHHHHHHHHHHHhhcc--ccccccCChHHHHHHHHHHhhC--CCCCCEEEEeCChHHHHHHH
Q 011777 96 RRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQ--HATTIYLHHAIADFAEALASKM--PGNLKVVYFVNSGTEANELA 171 (477)
Q Consensus 96 ~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~--~~~~~~~~~~~~~l~~~La~~~--~~~~~~v~~~~sGseA~~~A 171 (477)
..++||..|.. .++. ++.+.+++.+.+.... +....+..+.++.+++.+.+.+ +.+.++|++|+|+++|+..+
T Consensus 33 ~~~i~l~~~~~--~~~~-~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~ 109 (391)
T PRK08361 33 ENVISLGIGEP--DFDT-PKNIKEAAKRALDEGWTHYTPNAGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATYLA 109 (391)
T ss_pred cCeEEcCCCCC--CCCC-CHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCChHHHHHHH
Confidence 35788877764 3443 6788998888766421 1111222334445555544332 34567899999999999998
Q ss_pred HHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCC
Q 011777 172 MLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGK 251 (477)
Q Consensus 172 l~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~ 251 (477)
++... .+++.|++.+++|.+........ |...+.+|......+..| .+++++.++ .+
T Consensus 110 ~~~l~--~~g~~Vlv~~p~y~~~~~~~~~~-------------g~~~~~v~~~~~~~~~~d----~~~l~~~i~----~~ 166 (391)
T PRK08361 110 FESLL--EEGDEVIIPDPAFVCYVEDAKIA-------------EAKPIRIPLREENEFQPD----PDELLELIT----KR 166 (391)
T ss_pred HHHhc--CCCCEEEEcCCCCcccHHHHHHc-------------CCEEEEEecCCccCCCCC----HHHHHHhcc----cc
Confidence 88653 35678999999987764332221 222222222111112212 467777665 24
Q ss_pred eeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCcc--eeeeccccc-Cccc
Q 011777 252 VAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPD--IVTMAKGIG-NGLP 328 (477)
Q Consensus 252 ~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pD--ivt~sK~lg-~G~p 328 (477)
++++++...+|++|. ..+.+.+++|.++|+++++++|+||+|..|...+.....+.......+ +.+|||.+| .|+|
T Consensus 167 ~~~v~i~~p~NPtG~-~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~GlR 245 (391)
T PRK08361 167 TRMIVINYPNNPTGA-TLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDNTILANSFSKTFAMTGWR 245 (391)
T ss_pred cEEEEEeCCCCCCCc-CcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCCCCEEEEecCchhcCCcHhh
Confidence 555555544667774 557888999999999999999999999987544312222211111122 337999999 6999
Q ss_pred eEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeecc-cee
Q 011777 329 LGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGR-GLM 407 (477)
Q Consensus 329 ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~-g~~ 407 (477)
+||+++++++++.+.......+++.+.+.+.++.++|+.....++.++.++..+..++.+.+..++++.+....+. |++
T Consensus 246 iG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p~g~~~ 325 (391)
T PRK08361 246 LGFVIAPEQVIKDMIKLHAYIIGNVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHIKVFEPKGAFY 325 (391)
T ss_pred hhhhccCHHHHHHHHHHHhhhccCCChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCeecCCCEEEE
Confidence 9999999999887765443445677888888888887642222334444444444444443333334333333444 556
Q ss_pred EEEEEeeCCCCCCccHHHHHHHHHHHH-HcCceeeccCCC----CCEEEEeCCCCCcHHHHHHHHHHHHHHHhhC
Q 011777 408 VGMELVTDRKEKTPAKAETAVLFEKLR-ELGVLVGKGGLH----GNVFRIKPPMCFTKDDADFLVDALDYSMSKL 477 (477)
Q Consensus 408 ~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~----~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~l 477 (477)
+|+.+.... ....++.+.|+ ++||.+.|+..+ .+++||+.. .+++++++++++|.++++++
T Consensus 326 ~~~~l~~~~-------~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~--~~~~~l~~al~~l~~~l~~~ 391 (391)
T PRK08361 326 VFANIDETG-------MSSEDFAEWLLEKARVVVIPGTAFGKAGEGYIRISYA--TSKEKLIEAMERMEKALEEL 391 (391)
T ss_pred EEEECCCCC-------CCHHHHHHHHHHhCCEEEcCchhhCCCCCCEEEEEec--CCHHHHHHHHHHHHHHHhcC
Confidence 777773210 11345666675 579999987432 368999755 57889999999999998764
No 131
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.94 E-value=1.8e-24 Score=222.09 Aligned_cols=348 Identities=16% Similarity=0.136 Sum_probs=247.3
Q ss_pred CCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhcc------ccccccCChHHHHHHHHHHhh--CCCCCCEEEEeCCh
Q 011777 93 ENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQ------HATTIYLHHAIADFAEALASK--MPGNLKVVYFVNSG 164 (477)
Q Consensus 93 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~------~~~~~~~~~~~~~l~~~La~~--~~~~~~~v~~~~sG 164 (477)
.+....+||..|.....+ .....+.+++.+.++... +....+..+.+..+++.+... .....++|++|+|.
T Consensus 86 ~~~~~~i~f~~g~p~~~~-fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~ 164 (459)
T COG1167 86 EDDPSVIDFAGGLPDPSL-FPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGA 164 (459)
T ss_pred cCCCceecCCCCCCCccc-CCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCH
Confidence 455788999887743311 234566666666554321 122233445566777777633 34556799999999
Q ss_pred HHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHH
Q 011777 165 TEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHI 244 (477)
Q Consensus 165 seA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i 244 (477)
.+|+++++++... +++.|++-+++|++........ |+..+++|... ...+ .++|++.+
T Consensus 165 q~al~l~~~~l~~--pGd~v~vE~PtY~~~~~~~~~~-------------g~~~~~vp~d~-~G~~------~e~le~~~ 222 (459)
T COG1167 165 QQALDLLLRLLLD--PGDTVLVEDPTYPGALQALEAL-------------GARVIPVPVDE-DGID------PEALEEAL 222 (459)
T ss_pred HHHHHHHHHHhCC--CCCEEEEcCCCcHHHHHHHHHc-------------CCcEEecCCCC-CCCC------HHHHHHHH
Confidence 9999998886644 6788999999999875554333 33344444321 1122 58888888
Q ss_pred hccCCCCeeEEEecc-cCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCC---ccccccCCCcceeeec
Q 011777 245 DFGTSGKVAGFIAET-IQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHY---WGFETQGVIPDIVTMA 320 (477)
Q Consensus 245 ~~~~~~~~a~vi~ep-i~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~---~~~~~~gv~pDivt~s 320 (477)
+. .+++++++.| .||++| ..++.+--++|.++|++||++||.||.|..|.+.+... .+.+..+.+.-+-|||
T Consensus 223 ~~---~~~k~~y~~P~~qNPtG-~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~~~rViy~gSFS 298 (459)
T COG1167 223 AQ---WKPKAVYVTPTFQNPTG-VTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGRVIYLGSFS 298 (459)
T ss_pred hh---cCCcEEEECCCCCCCCC-CccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhCCCCCEEEEeeeh
Confidence 73 3788999999 677777 55688888999999999999999999999997775333 3344445566677999
Q ss_pred ccccCccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhC-C-Cc
Q 011777 321 KGIGNGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERH-D-II 398 (477)
Q Consensus 321 K~lg~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~-~-~~ 398 (477)
|.+..|+|+||+++++++++.+....+..+.+.+.+.+.+....|....-+++++++++..+.-++.+.+...++ + ..
T Consensus 299 K~l~PglRlG~vv~p~~~~~~~~~~k~~~~~~~s~~~Q~~la~~l~~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~ 378 (459)
T COG1167 299 KTLAPGLRLGYVVAPPELIEKLLRLKQAADLGPSSLSQAALAAFLLSGHYDRHLRRLRREYARRRDALLEALAEYLPELA 378 (459)
T ss_pred hhcccccceeeeeCCHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCe
Confidence 999999999999999999999988778888889999988887777632235555666666666666665555555 2 22
Q ss_pred e-eeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeec-cCC------CCCEEEEeCCCCCcHHHHHHHHHHH
Q 011777 399 G-DVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGK-GGL------HGNVFRIKPPMCFTKDDADFLVDAL 470 (477)
Q Consensus 399 ~-~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~-~~~------~~~~iRi~p~~~~t~e~i~~~l~~l 470 (477)
. ..+..|+++|+++.. ......+.+.++++||.+.+ +.. ..+.+|++++. .+++++++++.+|
T Consensus 379 ~~~~p~gG~flwl~l~~--------~~~~~~l~~~a~~~gv~i~~~g~~f~~~~~~~~~~Rl~~s~-~~~e~i~~gi~~l 449 (459)
T COG1167 379 TWTRPEGGLFLWLELPE--------GIDARELLAAALEKGVVVTPLGSAFSADGDPRNGLRLSFSS-PSEEEIEEGIKRL 449 (459)
T ss_pred eeecCCceEEEEEEcCC--------CCCHHHHHHHHHHCCCEEEcCCccccCCCCCCCeEEEEcCC-CCHHHHHHHHHHH
Confidence 2 233348999999843 23356889999999999988 421 24689999865 4689999999999
Q ss_pred HHHHhh
Q 011777 471 DYSMSK 476 (477)
Q Consensus 471 ~~~l~~ 476 (477)
.+++.+
T Consensus 450 ~~~~~~ 455 (459)
T COG1167 450 AALLRE 455 (459)
T ss_pred HHHHHH
Confidence 988864
No 132
>PRK12414 putative aminotransferase; Provisional
Probab=99.94 E-value=2.6e-24 Score=217.66 Aligned_cols=336 Identities=12% Similarity=0.042 Sum_probs=214.4
Q ss_pred EEEeecCCcccccCCCCCHHHHHHHHHHHhhc--cccccccCChHHHHHHHHHHhhCCCC--C-CEEEEeCChHHHHHHH
Q 011777 97 RYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLL--QHATTIYLHHAIADFAEALASKMPGN--L-KVVYFVNSGTEANELA 171 (477)
Q Consensus 97 ~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~--~~~~~~~~~~~~~~l~~~La~~~~~~--~-~~v~~~~sGseA~~~A 171 (477)
.+|||..|.. .++ .++.+.+++.+.+... .|....+..+.++++++++++.++.+ . +++++|+||++|+..+
T Consensus 30 ~~i~l~~g~p--~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~~~ 106 (384)
T PRK12414 30 DALNLSQGAP--NFA-PDPALVEGVARAMRDGHNQYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEGLYAA 106 (384)
T ss_pred CeEEcCCCCC--CCC-CCHHHHHHHHHHHHhCCCCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHHHHH
Confidence 4678877765 344 4788999988876542 12122233466778888887776543 2 4799999999999998
Q ss_pred HHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCC
Q 011777 172 MLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGK 251 (477)
Q Consensus 172 l~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~ 251 (477)
++... .+++.|++.+++|.++....... |...+.++... ..+..| .+++++.++ ++
T Consensus 107 ~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~-------------g~~~~~v~~~~-~~~~~d----~~~l~~~l~----~~ 162 (384)
T PRK12414 107 ISALV--HPGDEVIYFEPSFDSYAPIVRLQ-------------GATPVAIKLSP-EDFRVN----WDEVAAAIT----PR 162 (384)
T ss_pred HHHhc--CCCCEEEEeCCCccchHHHHHHc-------------CCEEEEEecCc-cccccC----HHHHHhhcC----cc
Confidence 88653 36688999999997754433222 11222222110 011111 466777664 34
Q ss_pred eeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccc-cccCCC---cceeeeccccc-Cc
Q 011777 252 VAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGF-ETQGVI---PDIVTMAKGIG-NG 326 (477)
Q Consensus 252 ~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~-~~~gv~---pDivt~sK~lg-~G 326 (477)
+++|++...+|++|. ..+++.+++|.++|++||+++|+||+|..|...+.....+ ...+.. .-+-+|||.++ .|
T Consensus 163 ~~~v~i~~p~NPTG~-~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pG 241 (384)
T PRK12414 163 TRMIIVNTPHNPSAT-VFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTG 241 (384)
T ss_pred cEEEEEcCCCCCCCc-CCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCcc
Confidence 566666655677774 5578889999999999999999999999876554211111 111222 22336999998 79
Q ss_pred cceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhch-hhHHHHHHHHHHHHHHHHHHHHHhCCCceeeecc-
Q 011777 327 LPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDK-ERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGR- 404 (477)
Q Consensus 327 ~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~- 404 (477)
+|+||+++++++++.+.......+++.+.+++.++.++|+.-.. .+..+.++++.+.+.+.|++ ++ +...++.
T Consensus 242 lRiG~~v~~~~l~~~l~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~----~g-~~~~~~~g 316 (384)
T PRK12414 242 WRVGYCLAPAELMDEIRKVHQFMVFSADTPMQHAFAEALAEPASYLGLGAFYQRKRDLLARELAG----SR-FELLPSEG 316 (384)
T ss_pred ceEEEEecCHHHHHHHHHHHhheecCCCcHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHh----CC-CeecCCCc
Confidence 99999999999998887655556778888999888887753111 12334444445555444443 33 2223344
Q ss_pred ceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCC------CCEEEEeCCCCCcHHHHHHHHHHHHH
Q 011777 405 GLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLH------GNVFRIKPPMCFTKDDADFLVDALDY 472 (477)
Q Consensus 405 g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~------~~~iRi~p~~~~t~e~i~~~l~~l~~ 472 (477)
|.++|+.+..- +.......+.+.|.++||.+.|+..+ .+++||+.+ .+++++++++++|.+
T Consensus 317 g~~~~~~~~~~-----~~~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~--~~~~~~~~~~~rl~~ 383 (384)
T PRK12414 317 SFFMLARFRHF-----SDESDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFS--KDDATLVEGARRLCS 383 (384)
T ss_pred ceEEEEccccc-----CCCCHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEec--CCHHHHHHHHHHHhh
Confidence 45666666321 00011233446677889999997433 468999765 479999999999864
No 133
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.94 E-value=2.7e-24 Score=217.55 Aligned_cols=336 Identities=13% Similarity=0.078 Sum_probs=212.1
Q ss_pred EEEeecCCcccccCCCCCHHHHHHHHHHHhhc--cccccccCChHHHHHHHHHHhhC--CCCCCEEEEeCChHHHHHHHH
Q 011777 97 RYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLL--QHATTIYLHHAIADFAEALASKM--PGNLKVVYFVNSGTEANELAM 172 (477)
Q Consensus 97 ~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~--~~~~~~~~~~~~~~l~~~La~~~--~~~~~~v~~~~sGseA~~~Al 172 (477)
.++||..|.. .++ .++++.+++.+.+... .|....+..+.++.+++.+.+.. +.+.++|++|+|+++|+..++
T Consensus 30 ~~i~l~~g~p--~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~al~~~~ 106 (384)
T PRK06348 30 DIIDLSLGDP--DLI-TDESIINAAFEDAKKGHTRYTDSGGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMYLAL 106 (384)
T ss_pred CcEEcCCCCC--CCC-CCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCChhhEEEcCChHHHHHHHH
Confidence 4688877754 243 3577877666544321 12212222344555666555432 345678999999999999998
Q ss_pred HHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCe
Q 011777 173 LMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKV 252 (477)
Q Consensus 173 ~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~ 252 (477)
.... .+++.|++.+++|.++.......+. ..+++|......+..| ++++++.++ +++
T Consensus 107 ~~~~--~~gd~vlv~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~d----~~~l~~~~~----~~~ 163 (384)
T PRK06348 107 QSIL--DPGDEVIIHEPYFTPYKDQIEMVGG-------------KPIILETYEEDGFQIN----VKKLEALIT----SKT 163 (384)
T ss_pred HHhc--CCCCEEEEeCCCCcchHHHHHHcCC-------------EEEEecCCcCcCCcCC----HHHHHHhhC----cCc
Confidence 8663 3567899999999887655443321 2222221101111112 477777765 234
Q ss_pred eEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccc-cccC---CCcceeeeccccc-Ccc
Q 011777 253 AGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGF-ETQG---VIPDIVTMAKGIG-NGL 327 (477)
Q Consensus 253 a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~-~~~g---v~pDivt~sK~lg-~G~ 327 (477)
.+|++...+|++| ..++.+.+++|.++|++||++||+||+|.+|...+ ....+ ...+ ...-+.+|||.++ .|+
T Consensus 164 ~~v~l~~p~NPtG-~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~~~~~vi~~~SfSK~~~l~Gl 241 (384)
T PRK06348 164 KAIILNSPNNPTG-AVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYE-DFVPMATLAGMPERTITFGSFSKDFAMTGW 241 (384)
T ss_pred cEEEEeCCCCCCC-cCCCHHHHHHHHHHHHHCCeEEEEecccccceeCC-CccchhhcCCCcCcEEEEecchhccCCccc
Confidence 4555544566677 45688999999999999999999999999885443 22121 1111 1222347999999 799
Q ss_pred ceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhch--hhHHHHHHHHHHHHHHHHHHHHHhCCCceeeecc-
Q 011777 328 PLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDK--ERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGR- 404 (477)
Q Consensus 328 pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~- 404 (477)
|+||+++++++++.+.......+++.+++++.++..+|+..++ +.+.+.++++.+++.+.|++ .+.+....+.
T Consensus 242 RiG~~v~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~~L~~----~~~~~~~~p~g 317 (384)
T PRK06348 242 RIGYVIAPDYIIETAKIINEGICFSAPTISQRAAIYALKHRDTIVPLIKEEFQKRLEYAYKRIES----IPNLSLHPPKG 317 (384)
T ss_pred cceeeecCHHHHHHHHHHHHhccCCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhc----CCCceeccCCe
Confidence 9999999999988887655556788899999999888863211 12333334444444444433 3322223333
Q ss_pred ceeEEEEEeeCCCCCCccHHHHHHHHHHHH-HcCceeeccCCC----CCEEEEeCCCCCcHHHHHHHHHHHHHH
Q 011777 405 GLMVGMELVTDRKEKTPAKAETAVLFEKLR-ELGVLVGKGGLH----GNVFRIKPPMCFTKDDADFLVDALDYS 473 (477)
Q Consensus 405 g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~----~~~iRi~p~~~~t~e~i~~~l~~l~~~ 473 (477)
|+++|+++.... ....++.+.|+ +.||.+.|+..+ .+++|++. ..+++++++++++|.+.
T Consensus 318 g~~~~~~~~~~~-------~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~--~~~~~~l~~al~~l~~~ 382 (384)
T PRK06348 318 SIYAFINIKKTG-------LSSVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLAC--TVGIEVLEEAFNRIEKM 382 (384)
T ss_pred eEEEEEecccCC-------CCHHHHHHHHHHhCCEEEcCchhhccCCCCeEEEEe--cCCHHHHHHHHHHHHhh
Confidence 556687763210 11346777765 579999987543 36899976 46899999999998764
No 134
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.94 E-value=2.2e-24 Score=219.48 Aligned_cols=349 Identities=14% Similarity=0.083 Sum_probs=213.0
Q ss_pred CCEEEeecCCcccc--cCCCCCHHHHHHHHHHHhhcccccccc-CChHHHHHHHHHHhhCC-----CCCCEEEEeCChHH
Q 011777 95 GRRYLDAFAGIVTV--SCGHCHPDVLNAIFEQSKLLQHATTIY-LHHAIADFAEALASKMP-----GNLKVVYFVNSGTE 166 (477)
Q Consensus 95 G~~ylD~~~g~~~~--~lGh~~p~v~~Av~~~l~~~~~~~~~~-~~~~~~~l~~~La~~~~-----~~~~~v~~~~sGse 166 (477)
|+.++++..|.+.. .++ .++.+.+++.+.+..... ..| ......+|++.+++++. .+.++|++|+|+++
T Consensus 30 ~~~~i~l~~g~p~~~~~~~-~~~~~~~~~~~~~~~~~~--~~Y~~~~g~~~lr~aia~~~~~~~~~~~~~~i~~t~G~~~ 106 (401)
T TIGR01264 30 EKPMIKLSIGDPTVFGNLP-TDPEVMQAMKDSLDSGKY--NGYAPTVGALSAREAIASYYHNPDGPIEADDVVLCSGCSH 106 (401)
T ss_pred CCCeeecCCCCCCCcCCCC-CCHHHHHHHHHHHhccCC--CCCCCCCCCHHHHHHHHHHHhhcCCCCCHHHEEECcChHH
Confidence 45778888776532 244 478899999887765211 112 22233455555555543 34578999999999
Q ss_pred HHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhc
Q 011777 167 ANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDF 246 (477)
Q Consensus 167 A~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~ 246 (477)
|+..++..... +++.|++.+++|..+....... |...+.++......++.| .+++++.++
T Consensus 107 al~~~~~~l~~--~gd~v~i~~P~y~~~~~~~~~~-------------g~~v~~~~~~~~~~~~~d----~~~l~~~~~- 166 (401)
T TIGR01264 107 AIEMCIAALAN--AGQNILVPRPGFPLYETLAESM-------------GIEVKLYNLLPDKSWEID----LKQLESLID- 166 (401)
T ss_pred HHHHHHHHhCC--CCCEEEEeCCCChhHHHHHHHc-------------CCEEEEeecCCccCCCCC----HHHHHHHhc-
Confidence 99999886643 5678999999997664333222 222222221111112212 466776664
Q ss_pred cCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccc-cccCC--Ccceeeecccc
Q 011777 247 GTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGF-ETQGV--IPDIVTMAKGI 323 (477)
Q Consensus 247 ~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~-~~~gv--~pDivt~sK~l 323 (477)
.+++++++...+|++|. ..+.+.+++|.++|+++|+++|+||+|.+|.+.+..+..+ ..... ..-+-+|||.+
T Consensus 167 ---~~~~~v~~~~p~NPtG~-~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~ 242 (401)
T TIGR01264 167 ---EKTAALIVNNPSNPCGS-VFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSSTVPILSCGGLAKRW 242 (401)
T ss_pred ---cCceEEEEcCCCCCCCC-CCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCCCCcEEEEccCcccC
Confidence 23455555444666674 5688889999999999999999999999886655212221 11111 11233799997
Q ss_pred c-CccceEEEEeCH------HHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCC
Q 011777 324 G-NGLPLGAVVTTP------EIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHD 396 (477)
Q Consensus 324 g-~G~pig~v~~~~------~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~ 396 (477)
+ .|+|+||+++++ ++++.+..... ..++.+++++.++.+.|+.. .++++++.++..+..++.+.+...+++
T Consensus 243 ~~~GlRiG~iv~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~a~~~~l~~~-~~~~l~~~~~~~~~~r~~l~~~L~~~~ 320 (401)
T TIGR01264 243 LVPGWRLGWIIIHDRRGILRDIRDGLVKLSQ-RILGPCTIVQGALPSILLRT-PQEYFDGTLSVLESNAMLCYGALAAVP 320 (401)
T ss_pred CCccceEEEEEecCcchhHHHHHHHHHHHhh-ccCCCCcHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 7 599999999874 34444433221 24566788998888888631 233444444433333444444433443
Q ss_pred Cce-eeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHH-HcCceeeccCCC--CCEEEEeCCCCCcHHHHHHHHHHHHH
Q 011777 397 IIG-DVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLR-ELGVLVGKGGLH--GNVFRIKPPMCFTKDDADFLVDALDY 472 (477)
Q Consensus 397 ~~~-~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~--~~~iRi~p~~~~t~e~i~~~l~~l~~ 472 (477)
.+. ..+..|+++|+++.... .+......++.+.|+ ++||++.|+..+ .+++||+.. .+++++++++++|.+
T Consensus 321 ~~~~~~p~~g~f~~~~~~~~~---~~~~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~iRis~~--~~~~~l~~~l~rl~~ 395 (401)
T TIGR01264 321 GLRPVMPSGAMYMMVGIEMEH---FPEFKNDVEFTERLVAEQSVFCLPGSCFEYPGFFRVVLT--VPVVMMEEACSRIQE 395 (401)
T ss_pred CCcccCCCeeeEEEEEecccc---cCCCCCHHHHHHHHHHhCCEEEeCchhcCCCCeEEEEEc--CCHHHHHHHHHHHHH
Confidence 232 23446888898874210 011111345666765 789999988544 479999754 578999999999999
Q ss_pred HHhhC
Q 011777 473 SMSKL 477 (477)
Q Consensus 473 ~l~~l 477 (477)
+++++
T Consensus 396 ~~~~~ 400 (401)
T TIGR01264 396 FCERH 400 (401)
T ss_pred HHhcc
Confidence 88764
No 135
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.94 E-value=4.1e-24 Score=218.09 Aligned_cols=356 Identities=12% Similarity=0.032 Sum_probs=219.7
Q ss_pred EEEeCCCCEEEeecCCccccc--CCCCCHHHHHHHHHHHhhc---cccccccCChHHHHHHHHHHhhC--------CCCC
Q 011777 89 YLFDENGRRYLDAFAGIVTVS--CGHCHPDVLNAIFEQSKLL---QHATTIYLHHAIADFAEALASKM--------PGNL 155 (477)
Q Consensus 89 ~~~d~dG~~ylD~~~g~~~~~--lGh~~p~v~~Av~~~l~~~---~~~~~~~~~~~~~~l~~~La~~~--------~~~~ 155 (477)
++.+..|+.+|||..|..... +- .++.+.+++.+.+... .|....+..+.++.+++.+.+.+ +.+.
T Consensus 26 ~~~~~~~~~~i~l~~g~p~~~~~~~-p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~ 104 (412)
T PTZ00433 26 AKPSPSPKSIIKLSVGDPTLDGNLL-TPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKK 104 (412)
T ss_pred hccCCCCCCeeecCCcCCCCcCCCC-CCHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhccccccccCCCCh
Confidence 345578889999998876421 22 5788999998877641 11111122344445555554421 2346
Q ss_pred CEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHH
Q 011777 156 KVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAAR 235 (477)
Q Consensus 156 ~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (477)
++|++|+|+++|+..+++... .+++.|++..++|..+....... |...+.+|......++.|
T Consensus 105 ~~i~it~G~~~al~~~~~~~~--~~gd~vlv~~P~y~~~~~~~~~~-------------g~~~~~i~~~~~~~~~~d--- 166 (412)
T PTZ00433 105 DNVVLCSGVSHAILMALTALC--DEGDNILVPAPGFPHYETVCKAY-------------GIEMRFYNCRPEKDWEAD--- 166 (412)
T ss_pred hhEEEeCChHHHHHHHHHHhc--CCCCEEEEccCCcccHHHHHHHc-------------CCEEEEEecCccccCcCC---
Confidence 789999999999999998653 35678999999998764443222 122222221111111111
Q ss_pred HHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccC-CCc
Q 011777 236 YAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQG-VIP 314 (477)
Q Consensus 236 ~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~g-v~p 314 (477)
.+++++.++ .++++|++...+|++| ...+.+.+++|.++|++||++||+||+|.+|.+.+..+..+..+. ..+
T Consensus 167 -~~~l~~~~~----~~~~~i~~~~p~NPtG-~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~ 240 (412)
T PTZ00433 167 -LDEIRRLVD----DRTKALIMTNPSNPCG-SNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDTTVP 240 (412)
T ss_pred -HHHHHHHhc----cCceEEEEeCCCCCCC-cccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccchhhccCCCc
Confidence 466776665 2455555544456677 556788899999999999999999999998865542211111111 111
Q ss_pred c--eeeeccccc-CccceEEEEe------CHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHH
Q 011777 315 D--IVTMAKGIG-NGLPLGAVVT------TPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLL 385 (477)
Q Consensus 315 D--ivt~sK~lg-~G~pig~v~~------~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~ 385 (477)
- +-+|||.++ .|+|+||+++ .+++++.+.... ..+++.+++.+.++.++|+.- .+.+.++.++..+..+
T Consensus 241 ~i~~~SfSK~~~~pGlRlG~~i~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~~r 318 (412)
T PTZ00433 241 RVILGGTAKNLVVPGWRLGWLLLVDPHGNGGDFLDGMKRLG-MLVCGPCSVVQAALGEALLNT-PQEHLEQIVAKLEEGA 318 (412)
T ss_pred eEEEccchhhcCCCCeeEEEEEEeCCcccHHHHHHHHHHHh-hccCCCChHHHHHHHHHHhcC-cHHHHHHHHHHHHHHH
Confidence 2 236999996 6999999997 245666665432 234678899999888888631 2344444444444444
Q ss_pred HHHHHHHHhCCCceeeec-cceeEEEEEeeCCCCCCccHHHHHHHHHHHH-HcCceeeccCCC--CCEEEEeCCCCCcHH
Q 011777 386 GRLRTLQERHDIIGDVRG-RGLMVGMELVTDRKEKTPAKAETAVLFEKLR-ELGVLVGKGGLH--GNVFRIKPPMCFTKD 461 (477)
Q Consensus 386 ~~L~~l~~~~~~~~~v~g-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~--~~~iRi~p~~~~t~e 461 (477)
+.+.+...++..+..+.+ .|+++|+.+...... ......++++.|+ ++||.+.++..+ .+++|++.. ..++
T Consensus 319 ~~l~~~L~~~~~~~~~~p~gg~f~~~~l~~~~~~---~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRis~~--~~~e 393 (412)
T PTZ00433 319 MVLYNHIGECIGLSPTMPRGSMFLMSRLDLEKFR---DIKSDVEFYEKLLEEENVQVLPGEIFHMPGFTRLTIS--RPVE 393 (412)
T ss_pred HHHHHHHhcCCCCcccCCCeeEEEEEEechhhcC---CCCCHHHHHHHHHHhcCEEEeCccccCCCCeEEEEec--CCHH
Confidence 444444434322322333 477788877321000 0001346777877 579999998644 478999764 4688
Q ss_pred HHHHHHHHHHHHHhh
Q 011777 462 DADFLVDALDYSMSK 476 (477)
Q Consensus 462 ~i~~~l~~l~~~l~~ 476 (477)
++++++++|.++++.
T Consensus 394 ~l~~al~~l~~~~~~ 408 (412)
T PTZ00433 394 VLREAVERIKAFCER 408 (412)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998764
No 136
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.94 E-value=3.2e-24 Score=214.45 Aligned_cols=324 Identities=17% Similarity=0.126 Sum_probs=213.4
Q ss_pred CEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHH
Q 011777 96 RRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMA 175 (477)
Q Consensus 96 ~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~a 175 (477)
..++||..+. +.+|. ++.+.+++.+.+.... .|+.+...+|++.++++++.+.++|++|+|+++++..+++..
T Consensus 19 ~~~~~l~~~~--~~~~~-p~~~~~a~~~~~~~~~----~Y~~~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~~~~ 91 (354)
T PRK06358 19 NMILDFSANI--NPLGV-PESLKQAITENLDKLV----EYPDPDYLELRKRIASFEQLDLENVILGNGATELIFNIVKVT 91 (354)
T ss_pred cceEEecCCC--CCCCC-CHHHHHHHHHHHHhhh----cCCCccHHHHHHHHHHHhCCChhhEEECCCHHHHHHHHHHHh
Confidence 3578987755 34554 7899999988765432 244444678999999998878889999999999999988853
Q ss_pred HhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeE-
Q 011777 176 RLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAG- 254 (477)
Q Consensus 176 r~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~- 254 (477)
..+.|++.+++|+.+....... |...+.++......+.-| +++.+.+. . ++++
T Consensus 92 ----~~~~v~i~~P~y~~~~~~~~~~-------------g~~~~~~~~~~~~~~~~d-----~~~~~~~~---~-~~~~v 145 (354)
T PRK06358 92 ----KPKKVLILAPTFAEYERALKAF-------------DAEIEYAELTEETNFAAN-----EIVLEEIK---E-EIDLV 145 (354)
T ss_pred ----CCCcEEEecCChHHHHHHHHHc-------------CCeeEEEeCccccCCCcc-----HHHHHhhc---c-CCCEE
Confidence 2357999999998775443222 222222221111112211 12222232 2 3444
Q ss_pred EEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCcc-ccccCCCcc---eeeeccccc-Cccce
Q 011777 255 FIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWG-FETQGVIPD---IVTMAKGIG-NGLPL 329 (477)
Q Consensus 255 vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~-~~~~gv~pD---ivt~sK~lg-~G~pi 329 (477)
++++| +|++| ..++++.+++|.++|++||+++|+||+|..|...+ .... +...+..+. +-+|||.+| .|+|+
T Consensus 146 ~~~~P-~NPtG-~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~-~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~Ri 222 (354)
T PRK06358 146 FLCNP-NNPTG-QLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEEN-ETISMINYLENFKNLIIIRAFTKFFAIPGLRL 222 (354)
T ss_pred EEeCC-CCCCC-CccCHHHHHHHHHHHHhcCCEEEEeCcccccCCCc-cchhHHHhccCCCCEEEEEechhhccCcchhh
Confidence 56677 56666 45688999999999999999999999999886554 2111 111121222 347999999 79999
Q ss_pred EEEEeC-HHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeE
Q 011777 330 GAVVTT-PEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMV 408 (477)
Q Consensus 330 g~v~~~-~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~ 408 (477)
||++++ +++++.+.... ..++.+.+++.++.++|+ ++++.++..+..+..++.+.+...+++.+...++.|.++
T Consensus 223 G~lv~~~~~~~~~~~~~~--~~~~~~~~~q~~~~~~l~---~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~g~f~ 297 (354)
T PRK06358 223 GYGLTSNKNLAEKLLQMR--EPWSINTFADLAGQTLLD---DKEYIKKTIQWIKEEKDFLYNGLSEFKGIKVYKPSVNFI 297 (354)
T ss_pred eeeecCCHHHHHHHHHhC--CCCcchHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCCcceEE
Confidence 999985 67777776543 356778888888888875 223333333333333344443333443343345667888
Q ss_pred EEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCC----CCEEEEeCCCCCcHHHHHHHHHHHHHHH
Q 011777 409 GMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLH----GNVFRIKPPMCFTKDDADFLVDALDYSM 474 (477)
Q Consensus 409 ~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~----~~~iRi~p~~~~t~e~i~~~l~~l~~~l 474 (477)
++.+. . ..++.+.|+++||.+.++..+ .+++||+ ..++++.++++++|++++
T Consensus 298 ~~~~~--------~---~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRls---~~~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 298 FFKLE--------K---PIDLRKELLKKGILIRSCSNYRGLDENYYRVA---VKSREDNKKLLKALEVIL 353 (354)
T ss_pred EEEcC--------c---hHHHHHHHHHCCeEEEECCCCCCCCCCEEEEE---eCCHHHHHHHHHHHHHHh
Confidence 88762 1 246888899999999998543 3689995 457899999999999876
No 137
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.94 E-value=1.5e-24 Score=220.64 Aligned_cols=330 Identities=16% Similarity=0.108 Sum_probs=210.1
Q ss_pred CCcccccCCCCCHHHHHHHHHHHhhc--cccc-----cccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHH
Q 011777 103 AGIVTVSCGHCHPDVLNAIFEQSKLL--QHAT-----TIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMA 175 (477)
Q Consensus 103 ~g~~~~~lGh~~p~v~~Av~~~l~~~--~~~~-----~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~a 175 (477)
.+.+....||++|++++++.++. .. .+.. ..+..+.+.+++++++++++.+.+.+.++++|+++.+.+++++
T Consensus 23 ~~l~~g~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~~~~v~~~~~g~~~~~~~~~~~ 101 (398)
T cd00613 23 SFLGSGTYKHNPPAVIKRNILEN-EFYTAYTPYQPEISQGRLQALFELQTMLCELTGMDVANASLQDEATAAAEAAGLAA 101 (398)
T ss_pred ccccccccCCcCcHHHHHHhccc-cCcccCCCCChhhhhhHHHHHHHHHHHHHHHHCCCccceeccCchHHHHHHHHHHH
Confidence 34455567999999999987776 32 1111 1223456788999999998766557888888887888888877
Q ss_pred HhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEE
Q 011777 176 RLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGF 255 (477)
Q Consensus 176 r~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~v 255 (477)
+...++.+.|++...+|+.+...+...+... +.....++.......+ .+++++.+. +++++|
T Consensus 102 ~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~--------g~~~~~v~~~~~~~~d------~~~l~~~i~----~~t~~v 163 (398)
T cd00613 102 IRAYHKRNKVLVPDSAHPTNPAVARTRGEPL--------GIEVVEVPSDEGGTVD------LEALKEEVS----EEVAAL 163 (398)
T ss_pred HhcccCCCEEEEcCccCcchHHHHHHhcccC--------CcEEEEeccCCCCCcC------HHHHHHhcC----CCeEEE
Confidence 6543233445556678887766665543210 1222222211111111 467777764 468889
Q ss_pred EecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCcceee--ecccc---c-Cccce
Q 011777 256 IAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVT--MAKGI---G-NGLPL 329 (477)
Q Consensus 256 i~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt--~sK~l---g-~G~pi 329 (477)
++++++ ++|.+ .++|++|.++|++||+++|+|++|......+ ....+ .+|+++ ++|.+ | ||+++
T Consensus 164 iv~~~~-~~G~~---~~~l~~i~~la~~~g~~livD~~~~~~~~~~----~~~~~--~~d~~~~s~~K~~~p~g~Ggp~~ 233 (398)
T cd00613 164 MVQYPN-TLGVF---EDLIKEIADIAHSAGALVYVDGDNLNLTGLK----PPGEY--GADIVVGNLQKTGVPHGGGGPGA 233 (398)
T ss_pred EEECCC-CCcee---cchHHHHHHHHHhcCCEEEEEeccccccCCC----ChHHc--CCCEEEeeccccCCCCCCCCCce
Confidence 998875 56766 3568999999999999999999876321111 11122 367765 56876 2 35889
Q ss_pred EEEEeCHHHHHhhccc-----------------------------ccccCCCCcHHHHHHHHHHHHhhchh---hHHHHH
Q 011777 330 GAVVTTPEIANVMAQK-----------------------------IQFNTFGGNPVCSAGGLAVLRVIDKE---RRQAHC 377 (477)
Q Consensus 330 g~v~~~~~~~~~~~~~-----------------------------~~~~t~~~~~~~~aaa~a~l~~l~~~---~~~~~~ 377 (477)
|+++.++++++.+... ...++++++++.++++.++++.+.++ +..++.
T Consensus 234 g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~~~~~~~ 313 (398)
T cd00613 234 GFFAVKKELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLGPEGLKEIAERA 313 (398)
T ss_pred eEEEEhhhhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 9999998888765221 11235666777877777777766543 356788
Q ss_pred HHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccC-CCCCEEEEeCCC
Q 011777 378 ADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGG-LHGNVFRIKPPM 456 (477)
Q Consensus 378 ~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~-~~~~~iRi~p~~ 456 (477)
++++++++++|+++.... .... .....+++.+.. .......++.+.|+++||++.... ...+.+|++|++
T Consensus 314 ~~~~~~l~~~L~~~~~~~-~~~~--~~~~~v~~~~~~------~~~~~~~~~~~~L~~~gi~~~~~~~~~~~~lRis~~~ 384 (398)
T cd00613 314 HLNANYLAKRLKEVGGVL-PFNG--PFFHEFVLRLPP------LYGIRAEDLAKALIDGGFHAPTMYLPVDGTLMIEPTE 384 (398)
T ss_pred HHHHHHHHHHHHhcCCcc-cCCC--CeeEEEEEEcCC------cchHHHHHHHHhhhhcCccccccccCCCCeEEEEcCC
Confidence 888888888887752111 0110 111122333311 002345678899999999875421 135789999999
Q ss_pred CCcHHHHHHHHHHH
Q 011777 457 CFTKDDADFLVDAL 470 (477)
Q Consensus 457 ~~t~e~i~~~l~~l 470 (477)
.+|++|||++++.|
T Consensus 385 ~~t~edid~~~~~L 398 (398)
T cd00613 385 TETKEELDALLEAL 398 (398)
T ss_pred CCCHHHHHHHHHhC
Confidence 99999999999864
No 138
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.94 E-value=3.4e-24 Score=216.86 Aligned_cols=338 Identities=12% Similarity=0.043 Sum_probs=209.8
Q ss_pred CCEEEeecCCcccccCCCCCHHHHHHHHHHHhhcc---ccccccCChHHHHHHHHHHhhCCC--CCC-EEEEeCChHHHH
Q 011777 95 GRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQ---HATTIYLHHAIADFAEALASKMPG--NLK-VVYFVNSGTEAN 168 (477)
Q Consensus 95 G~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~---~~~~~~~~~~~~~l~~~La~~~~~--~~~-~v~~~~sGseA~ 168 (477)
|..++||..|.. .++ .++.+.+++.+.+.... +....+..+.+..+++.+.+..+. +.+ .|++|+|+++++
T Consensus 28 ~~~~~~l~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~~l 104 (383)
T TIGR03540 28 GVDVISLGIGDP--DLP-TPKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKEGI 104 (383)
T ss_pred CCCeEEeCCCCC--CCC-CCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHHHH
Confidence 556788887764 344 36789999988765321 111112234455555555544322 334 689999999999
Q ss_pred HHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccC
Q 011777 169 ELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGT 248 (477)
Q Consensus 169 ~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~ 248 (477)
..+++... .+++.|++.+++|.++....... |...+.+|......+..| ++++++.+.
T Consensus 105 ~~~~~~~~--~~gd~vlv~~P~y~~~~~~~~~~-------------G~~v~~v~~~~~~g~~~d----~~~l~~~~~--- 162 (383)
T TIGR03540 105 AHIPLAFV--NPGDIVLVPDPGYPVYRIGTLFA-------------GGEPYEMPLKEENGFLPD----FDAIPEDIA--- 162 (383)
T ss_pred HHHHHHhC--CCCCEEEEeCCCCcchHHHHHhc-------------CCEEEEEecCcccCCccC----HHHHHhhcc---
Confidence 99988653 36678999999998875544333 222222222111112111 356666554
Q ss_pred CCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccc---cc-cCCCcceeeeccccc
Q 011777 249 SGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGF---ET-QGVIPDIVTMAKGIG 324 (477)
Q Consensus 249 ~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~---~~-~gv~pDivt~sK~lg 324 (477)
.++++|++...+|++| ..++.+.+++|.++|++||++||+||+|..+.+.+.....+ +. .+....+.+|||.+|
T Consensus 163 -~~~~~v~i~~P~NPtG-~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g 240 (383)
T TIGR03540 163 -KKAKLMFINYPNNPTG-AVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYN 240 (383)
T ss_pred -ccceEEEEeCCCCCcC-ccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccC
Confidence 2455666654466677 56689999999999999999999999999775543111111 11 122344558999998
Q ss_pred -CccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeec
Q 011777 325 -NGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRG 403 (477)
Q Consensus 325 -~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g 403 (477)
.|+|+||+++++++++.+.........+.+.+.+.++.++|+.. +++.+..++..+..++.+.+..++++. ....+
T Consensus 241 ~~GlRiG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~L~~~~~-~~~~~ 317 (383)
T TIGR03540 241 MTGWRIGMAVGNADLIAGLGKVKTNVDSGVFQAIQYAAIAALNGP--QDVVKEIRKIYQRRRDLLLEALKKIGI-DVEKP 317 (383)
T ss_pred CccceeeEEeCCHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHhCCC-EecCC
Confidence 69999999999999888765433334455667788887777532 333333333333334444344344442 22233
Q ss_pred -cceeEEEEEeeCCCCCCccHHHHHHHHHHHH-HcCceeeccCCC----CCEEEEeCCCCCcHHHHHHHHHHHHH
Q 011777 404 -RGLMVGMELVTDRKEKTPAKAETAVLFEKLR-ELGVLVGKGGLH----GNVFRIKPPMCFTKDDADFLVDALDY 472 (477)
Q Consensus 404 -~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~----~~~iRi~p~~~~t~e~i~~~l~~l~~ 472 (477)
.|+++|+.+... ....++.+.|+ ++||.+.++..+ .+++||+.+ .+++++++++++|.+
T Consensus 318 ~~~~~~~~~l~~~--------~~~~~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~--~~~~~l~~~l~~l~~ 382 (383)
T TIGR03540 318 KATFYVWVPVPEG--------YTSAEFAARLLEETGVVVTPGVGFGEYGEGYIRISLT--VPDERLEEAVARIKK 382 (383)
T ss_pred CcceEEEEECCCC--------CCHHHHHHHHHHHCCEEEecchhhCccCCCeEEEEec--CCHHHHHHHHHHHhh
Confidence 356678876321 12456777765 689999987432 368999764 678899999988764
No 139
>PLN02187 rooty/superroot1
Probab=99.94 E-value=4.6e-24 Score=219.79 Aligned_cols=355 Identities=13% Similarity=0.070 Sum_probs=212.2
Q ss_pred CCCCEEEeecCCccccc-CCCCCHHHHHHHHHHHhhcc---ccccccCChHHHHHHHHHHhhC--CCCCCEEEEeCChHH
Q 011777 93 ENGRRYLDAFAGIVTVS-CGHCHPDVLNAIFEQSKLLQ---HATTIYLHHAIADFAEALASKM--PGNLKVVYFVNSGTE 166 (477)
Q Consensus 93 ~dG~~ylD~~~g~~~~~-lGh~~p~v~~Av~~~l~~~~---~~~~~~~~~~~~~l~~~La~~~--~~~~~~v~~~~sGse 166 (477)
.+++.+|++..|..... .=-.++++.+++.+.++... +....+..+.+..+++.+.+.. +.+.++|++|+|+++
T Consensus 63 ~~~~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~G~~~ 142 (462)
T PLN02187 63 DVNKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGKGNSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQ 142 (462)
T ss_pred CCCCCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCChHHHHHHHHHHHHHhcCCCCCcccEEEeCCHHH
Confidence 44678888877743210 00135688999888776432 1111112234444555554433 245679999999999
Q ss_pred HHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhc
Q 011777 167 ANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDF 246 (477)
Q Consensus 167 A~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~ 246 (477)
|+..+++... .+++.|++.+++|.++...+... |.....++......+..| +++++++++
T Consensus 143 al~~~~~~l~--~pGd~Vlv~~P~y~~y~~~~~~~-------------g~~~~~~~l~~~~~~~~d----~~~l~~~~~- 202 (462)
T PLN02187 143 GIEIVFESLA--RPNANILLPRPGFPHYDARAAYS-------------GLEVRKFDLLPEKEWEID----LEGIEAIAD- 202 (462)
T ss_pred HHHHHHHHhc--CCCCEEEEeCCCCccHHHHHHHc-------------CCEEEEEeCccccCCccC----HHHHHHhcC-
Confidence 9999998653 36688999999999864433222 112222111111112222 467777664
Q ss_pred cCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCcccccc-CCCc--ceeeecccc
Q 011777 247 GTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQ-GVIP--DIVTMAKGI 323 (477)
Q Consensus 247 ~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~-gv~p--Divt~sK~l 323 (477)
.+..+++++.|. |++| .+.+.+.+++|.++|++||++||+||+|..|.+.+..+..+..+ +..+ -+-+|||.+
T Consensus 203 --~~~~~v~i~nP~-NPTG-~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f 278 (462)
T PLN02187 203 --ENTVAMVVINPN-NPCG-NVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGISKGW 278 (462)
T ss_pred --CCcEEEEEeCCC-CCCC-CccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhccCCcEEEEecchhhc
Confidence 345567777775 5556 56689999999999999999999999999876555222122211 1111 223699998
Q ss_pred c-CccceEEEEeC-H-HH---HHhhcccccccCC--CCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhC
Q 011777 324 G-NGLPLGAVVTT-P-EI---ANVMAQKIQFNTF--GGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERH 395 (477)
Q Consensus 324 g-~G~pig~v~~~-~-~~---~~~~~~~~~~~t~--~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~ 395 (477)
+ .|+|+||++++ + .+ ++.+........+ +.+.+.+.++.++|+.. .+++.++.++..+.-++.+.+...++
T Consensus 279 ~~pGlRiG~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~-~~~~l~~~~~~l~~~r~~l~~~L~~~ 357 (462)
T PLN02187 279 VVPGWKIGWIALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPAILEKA-DKNFFAKKNKILKHNVDLVCDRLKDI 357 (462)
T ss_pred CCccceeEEEEecCchhHHHHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcC-cHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 8 59999999983 3 22 2334332222223 44788999998888631 23344444433333334443433334
Q ss_pred CCcee--eeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCC--CCEEEEeCCCCCcHHHHHHHHHHHH
Q 011777 396 DIIGD--VRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLH--GNVFRIKPPMCFTKDDADFLVDALD 471 (477)
Q Consensus 396 ~~~~~--v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~--~~~iRi~p~~~~t~e~i~~~l~~l~ 471 (477)
+.... .+..|+++++.+...... ........+.+.+.++||++.||..+ .++|||+. ...++++++++++|.
T Consensus 358 ~~~~~~~~P~gg~fl~~~l~~~~~~--~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~iRis~--~~~~e~l~~al~rL~ 433 (462)
T PLN02187 358 PCVVCPKKPESCTYLLTKLELSLMD--NIKDDIDFCVKLAREENLVFLPGDALGLKNWMRITI--GVEAHMLEDALERLK 433 (462)
T ss_pred CCCcCCCCCCEeEEEEeecChhhCC--CCCCHHHHHHHHHhhCCEEEECccccCCCCeEEEEe--CCCHHHHHHHHHHHH
Confidence 43321 233467778776321000 00011233456668899999998544 47999965 457899999999999
Q ss_pred HHHhh
Q 011777 472 YSMSK 476 (477)
Q Consensus 472 ~~l~~ 476 (477)
+++++
T Consensus 434 ~~l~~ 438 (462)
T PLN02187 434 GFCTR 438 (462)
T ss_pred HHHHH
Confidence 98854
No 140
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.94 E-value=4e-24 Score=217.08 Aligned_cols=337 Identities=12% Similarity=0.015 Sum_probs=208.9
Q ss_pred CCEEEeecCCcccccCCCCCHHHHHHHHHHHhhc---cccccccCChHHHHHHHHHHhhCC--CCCC-EEEEeCChHHHH
Q 011777 95 GRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLL---QHATTIYLHHAIADFAEALASKMP--GNLK-VVYFVNSGTEAN 168 (477)
Q Consensus 95 G~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~---~~~~~~~~~~~~~~l~~~La~~~~--~~~~-~v~~~~sGseA~ 168 (477)
|+.++||..|.+ .+..++++.+++.+.+... .+....+..+.+.++++.+.+..+ .+.+ .+++|+|+++|+
T Consensus 34 g~~~i~l~~g~p---~~~~p~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~al 110 (394)
T PRK05942 34 GLDLIDLGMGNP---DGAAPQPVIEAAIAALADPQNHGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLGSKEGL 110 (394)
T ss_pred CCCeEEcCCCCC---CCCCCHHHHHHHHHHHhCCCCccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccChHHHH
Confidence 556789887643 3334667888887776532 121112223445566666655433 3445 588999999999
Q ss_pred HHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccC
Q 011777 169 ELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGT 248 (477)
Q Consensus 169 ~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~ 248 (477)
..++.... .+++.|++.+++|.+........ |...+++|......+..| .+++++.+.
T Consensus 111 ~~~~~~~~--~~gd~Vlv~~P~y~~~~~~~~~~-------------g~~~~~v~~~~~~~~~~d----~~~l~~~~~--- 168 (394)
T PRK05942 111 THLALAYV--NPGDVVLVPSPAYPAHFRGPLIA-------------GAQIYPIILKPENDWLID----LSSIPEEVA--- 168 (394)
T ss_pred HHHHHHhC--CCCCEEEEcCCCCcchHHHHHHc-------------CCEEEEeecCCccCCccC----HHHHHHhcc---
Confidence 99887553 36788999999998765443222 222222222111112212 366766664
Q ss_pred CCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCcc---cc-ccCCCcceeeeccccc
Q 011777 249 SGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWG---FE-TQGVIPDIVTMAKGIG 324 (477)
Q Consensus 249 ~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~---~~-~~gv~pDivt~sK~lg 324 (477)
+++++|++...+|++| ..++++.+++|.++|++||+++|+||+|..|...+....+ +. ..+....+-+|||.++
T Consensus 169 -~~~k~i~l~~P~NPtG-~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~ 246 (394)
T PRK05942 169 -QQAKILYFNYPSNPTT-ATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYN 246 (394)
T ss_pred -ccceEEEEcCCCCCCC-CcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccC
Confidence 3556666664466667 5568899999999999999999999999887654421111 11 1222344567999997
Q ss_pred -CccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhch--hhHHHHHHHHHHHHHHHHHHHHHhCCCceee
Q 011777 325 -NGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDK--ERRQAHCADVGSHLLGRLRTLQERHDIIGDV 401 (477)
Q Consensus 325 -~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v 401 (477)
.|+|+||+++++++++.+........++.+.+++.++.++|+..++ ++..++++++.+++.+.|++ ++. ...
T Consensus 247 ~~GlRiG~i~~~~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~----~~~-~~~ 321 (394)
T PRK05942 247 MAGWRVGFVVGNRHIIQGLRTLKTNLDYGIFSALQKAAETALQLPDSYLQQVQERYRTRRDFLIQGLGE----LGW-NIP 321 (394)
T ss_pred ChhhheeeeecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH----CCC-eec
Confidence 6999999999999999887654444566777888888888864321 22334444444444444433 332 222
Q ss_pred ec-cceeEEEEEeeCCCCCCccHHHHHHHHH-HHHHcCceeeccCCC----CCEEEEeCCCCCcHHHHHHHHHHHHHH
Q 011777 402 RG-RGLMVGMELVTDRKEKTPAKAETAVLFE-KLRELGVLVGKGGLH----GNVFRIKPPMCFTKDDADFLVDALDYS 473 (477)
Q Consensus 402 ~g-~g~~~~i~~~~~~~~~~~~~~~~~~~~~-~l~~~Gv~v~~~~~~----~~~iRi~p~~~~t~e~i~~~l~~l~~~ 473 (477)
++ .|+++|+.+... ....++.. .+.++||.+.++..+ .+++|++++ .+.+.+.+++++|.++
T Consensus 322 ~~~~~~f~~~~~~~~--------~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~--~~~~~l~~~l~~l~~~ 389 (394)
T PRK05942 322 PTKATMYLWVPCPVG--------MGSTDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLI--ADCDRLGEALDRLKQA 389 (394)
T ss_pred CCCeeeEEEEECCCC--------CCHHHHHHHHHHHCCEEEeCChhhCcCCCCeEEEEec--CCHHHHHHHHHHHHHh
Confidence 33 355778876321 01234444 456789999887432 469999865 4567777777777653
No 141
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=3.4e-24 Score=215.98 Aligned_cols=336 Identities=14% Similarity=0.095 Sum_probs=214.6
Q ss_pred CEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCC--------CCCCEEEEeCChHHH
Q 011777 96 RRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMP--------GNLKVVYFVNSGTEA 167 (477)
Q Consensus 96 ~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~--------~~~~~v~~~~sGseA 167 (477)
..++|+..|.. +++ .+|.+.+++.+.+..... ...|+.....+|++.+++++. .+.++|++|+|++++
T Consensus 28 ~~~~~l~~~~~--~~~-~~~~~~~~~~~~~~~~~~-~~~Y~~~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~a 103 (374)
T PRK02610 28 IQLDRLDTNEF--PYD-LPPDLKQKLAWLYQQGIE-SNRYPDGGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDEL 103 (374)
T ss_pred cceeEecCCCC--CCC-CCHHHHHHHHHHHhhccc-ccCCCCCchHHHHHHHHHHhCccccccCCCCHHHEEEcCChHHH
Confidence 46888887764 454 478999999987665211 122333344566666666654 456789999999999
Q ss_pred HHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhcc
Q 011777 168 NELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFG 247 (477)
Q Consensus 168 ~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~ 247 (477)
+..++.... ..+.+.|++.+++|.++...+...+ ...+.++.. ...++.| .++++++++..
T Consensus 104 l~~~~~~~~-~~g~~~Vlv~~P~y~~~~~~~~~~g-------------~~~~~~~~~-~~~~~~d----~~~l~~~~~~~ 164 (374)
T PRK02610 104 IRSLLIATC-LGGEGSILVAEPTFSMYGILAQTLG-------------IPVVRVGRD-PETFEID----LAAAQSAIEQT 164 (374)
T ss_pred HHHHHHHHc-CCCCCeEEEcCCChHHHHHHHHHcC-------------CEEEEecCC-cccCCCC----HHHHHHHHHhh
Confidence 987776432 2343479999999987755443332 222222211 0112222 47777777521
Q ss_pred CCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCcceeeeccccc-Cc
Q 011777 248 TSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIG-NG 326 (477)
Q Consensus 248 ~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg-~G 326 (477)
...++++|++.+.+|++|. ..+++.+++|.++| ++++||+||+|..|.... ............-+-+|||.+| .|
T Consensus 165 ~~~~~k~i~l~~P~NPTG~-~~s~~~l~~l~~~~--~~~~iI~De~Y~~~~~~~-~~~~~~~~~~~ivi~SfSK~~g~~G 240 (374)
T PRK02610 165 QNPPVRVVFVVHPNSPTGN-PLTAAELEWLRSLP--EDILVVIDEAYFEFSQTT-LVGELAQHPNWVILRTFSKAFRLAA 240 (374)
T ss_pred cCCCceEEEEeCCCCCCCC-CCCHHHHHHHHhcc--CCcEEEEeccccccCccc-hHHHHhcCCCEEEEEecchhccCcc
Confidence 1245667766566777884 45777889998887 499999999999884321 1111111111112447999997 69
Q ss_pred cceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccce
Q 011777 327 LPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGL 406 (477)
Q Consensus 327 ~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~ 406 (477)
+|+||+++++++++.+.... ..++.+.+++.++.++++. .+.+.+++++..+. ++.+.+...+++.+...+..|.
T Consensus 241 lRiG~~v~~~~l~~~l~~~~--~~~~~~~~~q~a~~~~l~~--~~~~~~~~~~~~~~-r~~l~~~L~~~~~~~~~p~~g~ 315 (374)
T PRK02610 241 HRVGYAIGHPELIAVLEKVR--LPYNLPSFSQLAAQLALEH--RQELLAAIPEILQE-RDRLYQALQELPQLRVWPSAAN 315 (374)
T ss_pred cceeeeecCHHHHHHHHHhc--CCCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHH-HHHHHHHHHhCCCcEeCCCcce
Confidence 99999999999998887543 3466788888888887763 23444444444333 3344444344433333355678
Q ss_pred eEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHHHhhC
Q 011777 407 MVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADFLVDALDYSMSKL 477 (477)
Q Consensus 407 ~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~l 477 (477)
++|+++... .....+.+.|+++||.+.+. .+++||+.. +++++++++++|.+++.++
T Consensus 316 f~~~~l~~~--------~~~~~~~~~l~~~gi~v~~~---~~~lRls~~---~~~~~~~~l~~l~~~l~~~ 372 (374)
T PRK02610 316 FLYLRLSQD--------AALAALHQALKAQGTLVRHT---GGGLRITIG---TPEENQRTLERLQAALTQL 372 (374)
T ss_pred EEEEeCCCC--------CCHHHHHHHHHHCCEEEEeC---CCeEEEeCC---CHHHHHHHHHHHHHHHhhc
Confidence 888876321 12456788899999999764 468999643 4678999999999988754
No 142
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.94 E-value=2e-24 Score=215.62 Aligned_cols=320 Identities=18% Similarity=0.180 Sum_probs=208.8
Q ss_pred CEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHH
Q 011777 96 RRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMA 175 (477)
Q Consensus 96 ~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~a 175 (477)
...|||..|.. .++ .+|++++++.+++.... .|..+...++++.++++++.+.+++++++|+++++..+++..
T Consensus 19 ~~~i~l~~~~~--~~~-~~~~~~~a~~~~~~~~~----~y~~~~~~~lr~~ia~~~~~~~~~i~~~~G~~~~l~~~~~~l 91 (346)
T TIGR01141 19 KEVIKLNSNEN--PFG-PPPKAKEALRAEADKLH----RYPDPDPAELKQALADYYGVDPEQILLGNGSDEIIELLIRAF 91 (346)
T ss_pred CceEEccCCCC--CCC-CCHHHHHHHHHhHHHhh----cCCCCCHHHHHHHHHHHhCcChHHEEEcCCHHHHHHHHHHHh
Confidence 47999987764 455 47899999998875321 233344578889999988766678999999999998888765
Q ss_pred HhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEE
Q 011777 176 RLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGF 255 (477)
Q Consensus 176 r~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~v 255 (477)
. .+++.|++.+++|..+....... |...+.++.... +..| .+++++.+. +++++|
T Consensus 92 ~--~~gd~v~~~~p~y~~~~~~~~~~-------------g~~~~~~~~~~~--~~~d----~~~l~~~~~----~~~~~v 146 (346)
T TIGR01141 92 L--EPGDAVLVPPPTYSMYEISAKIH-------------GAEVVKVPLDED--GQLD----LEDILVAID----DKPKLV 146 (346)
T ss_pred c--CCCCEEEEcCCCHHHHHHHHHHc-------------CCeEEEeccCCC--CCCC----HHHHHHhcC----CCCCEE
Confidence 3 35678999998885432211111 222222221111 1111 466666543 356777
Q ss_pred EecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCccee---eeccccc-CccceEE
Q 011777 256 IAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIV---TMAKGIG-NGLPLGA 331 (477)
Q Consensus 256 i~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDiv---t~sK~lg-~G~pig~ 331 (477)
+++..++++|.+.+ .+.++++.+.|+ +|+++|+||+|.+|...+ ... +.....++++ ++||.++ .|+|+||
T Consensus 147 ~l~~p~NptG~~~~-~~~~~~l~~~~~-~~~~ii~D~~y~~~~~~~-~~~--~~~~~~~~~i~~~S~sK~~g~~G~r~G~ 221 (346)
T TIGR01141 147 FLCSPNNPTGNLLS-RSDIEAVLERTP-EDALVVVDEAYGEFSGEP-STL--PLLAEYPNLIVLRTLSKAFGLAGLRIGY 221 (346)
T ss_pred EEeCCCCCCCCCCC-HHHHHHHHHhCC-CCcEEEEECchhhhcCCc-cHH--HHHhhCCCEEEEehhhHhhhchhhhcee
Confidence 77766777886665 444444444443 499999999999775432 222 1111223433 6899997 5899999
Q ss_pred EEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhc-hhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEE
Q 011777 332 VVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVID-KERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGM 410 (477)
Q Consensus 332 v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~-~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i 410 (477)
+++++++.+.+.... .+++.+++++.++.+.++... -++..++++++.+++++.|++ ++.+...+..|.++++
T Consensus 222 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~~g~~~~~~~g~~~~~ 295 (346)
T TIGR01141 222 AIANAEIIDALNKVR--APFNLSRLAQAAAIAALRDDDFIEKTVEEINAERERLYDGLKK----LPGLEVYPSDANFVLI 295 (346)
T ss_pred eecCHHHHHHHHhcc--CCCCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHh----cCCCEECCCcCCEEEE
Confidence 999999988887543 356778899998888876432 123344445555555555443 3323333445778888
Q ss_pred EEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCC---CCEEEEeCCCCCcHHHHHHHHHHHH
Q 011777 411 ELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLH---GNVFRIKPPMCFTKDDADFLVDALD 471 (477)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~---~~~iRi~p~~~~t~e~i~~~l~~l~ 471 (477)
++.. ...++.+.|.++||.+.++..+ .+++|++++ +++|++++++.|+
T Consensus 296 ~~~~----------~~~~~~~~L~~~gI~v~~g~~f~~~~~~iRls~~---~~~~i~~~~~~l~ 346 (346)
T TIGR01141 296 RFPR----------DADALFEALLEKGIIVRDLNSYPGLPNCLRITVG---TREENDRFLAALR 346 (346)
T ss_pred ecCC----------CHHHHHHHHHHCCeEEEeCCCcCCCCCeEEEecC---CHHHHHHHHHHhC
Confidence 7631 2457888999999999987544 588999754 7899999998763
No 143
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.94 E-value=6.7e-24 Score=215.90 Aligned_cols=352 Identities=11% Similarity=0.044 Sum_probs=219.3
Q ss_pred CCEEEeecCCcccccCCCCCHHHHHHHHHHHhhcc--ccccccCChHHHHHHHHHHhhCCC--CCCEEEEeCChHHHHHH
Q 011777 95 GRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQ--HATTIYLHHAIADFAEALASKMPG--NLKVVYFVNSGTEANEL 170 (477)
Q Consensus 95 G~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~--~~~~~~~~~~~~~l~~~La~~~~~--~~~~v~~~~sGseA~~~ 170 (477)
|...+|+..|.+. ++ .+|.+.+++.+.+.... +....+..+.+.++++.+.+..+. ..++|++|+|+++|+..
T Consensus 32 ~~~~i~l~~g~p~--~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~ 108 (402)
T PRK06107 32 GRSIVDLTVGEPD--FD-TPDHIKQAAVAAIERGETKYTLVNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAIFL 108 (402)
T ss_pred cCCEEEcCCCCCC--CC-CCHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHH
Confidence 4457788777753 33 37889999988876422 222223446677788888776543 45689999999999999
Q ss_pred HHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCC
Q 011777 171 AMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSG 250 (477)
Q Consensus 171 Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~ 250 (477)
+++.. ..+++.|++.+++|.++........+ ..+.++......+..+ .+++++.+. ++
T Consensus 109 ~~~~~--~~~gd~vl~~~p~y~~y~~~~~~~~~-------------~~~~v~~~~~~~~~~~----~~~l~~~~~---~~ 166 (402)
T PRK06107 109 ALMAT--LEAGDEVIIPAPYWVSYPDMVLANDG-------------TPVIVACPEEQGFKLT----PEALEAAIT---PR 166 (402)
T ss_pred HHHHh--cCCCCEEEEecCCCcCHHHHHHHcCC-------------EEEEecCCcccCCCCC----HHHHHhhcC---cC
Confidence 98743 33567888999988776443322211 1111111111112212 366777664 22
Q ss_pred CeeEEEecccCCCCCeeeCCchhHHHHHHHHHHh-CcEEEEcCcccCccCCCCCCcccc-c-cCCCccee---eeccccc
Q 011777 251 KVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKA-GGVCIADEVQTGFGRTGSHYWGFE-T-QGVIPDIV---TMAKGIG 324 (477)
Q Consensus 251 ~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~-gillI~DEv~~gfgr~G~~~~~~~-~-~gv~pDiv---t~sK~lg 324 (477)
..+++++.| +|++| ..++.+.+++|.++|++| |+++|+||+|..+.+.+..+..+. . .+....++ +|||.++
T Consensus 167 ~~~v~l~~p-~NPtG-~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~ 244 (402)
T PRK06107 167 TRWLILNAP-SNPTG-AVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYA 244 (402)
T ss_pred ceEEEEECC-CCCCC-cCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhc
Confidence 334445545 55666 566888899999999998 999999999988755441111111 1 12222333 5799998
Q ss_pred -CccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeec
Q 011777 325 -NGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRG 403 (477)
Q Consensus 325 -~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g 403 (477)
.|+|+||+++++++++.+.......+++.+.+.+.++..+|+. .+.+.++.++..+..++.+.+..++++.+....+
T Consensus 245 ~pGlRiG~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~p 322 (402)
T PRK06107 245 MTGWRIGYAAGPADLIAAINKLQSQSSSCPSSISQAAAAAALNG--DQSFVTESVAVYKQRRDYALALLNAIPGLSCLVP 322 (402)
T ss_pred CcccceeeeecCHHHHHHHHHHHHhcccCCChHHHHHHHHHhcC--ChHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCC
Confidence 7999999999999999887765556677889999999888852 2334333333333333333333333433333333
Q ss_pred -cceeEEEEEeeCCCCCCccHH---HHHHHH-HHHHHcCceeeccCCC--CCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 404 -RGLMVGMELVTDRKEKTPAKA---ETAVLF-EKLRELGVLVGKGGLH--GNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 404 -~g~~~~i~~~~~~~~~~~~~~---~~~~~~-~~l~~~Gv~v~~~~~~--~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
.|+++|+.+..-.....|... ....+. +.+.++||.+.|+..+ .+++||+.. .+++++++++++|.+.+++
T Consensus 323 ~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg~~~~iRis~~--~~~e~l~~~l~~l~~~l~~ 400 (402)
T PRK06107 323 DGAFYLYVNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAYGLSPYFRLSIA--TSLETLEEACARIERAVAA 400 (402)
T ss_pred CcceEEeeecccccccccccccCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeC--CCHHHHHHHHHHHHHHHHh
Confidence 356667776311000001110 123444 4456789999998655 368999755 5799999999999999876
Q ss_pred C
Q 011777 477 L 477 (477)
Q Consensus 477 l 477 (477)
+
T Consensus 401 ~ 401 (402)
T PRK06107 401 L 401 (402)
T ss_pred c
Confidence 4
No 144
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.94 E-value=7.2e-24 Score=214.74 Aligned_cols=337 Identities=15% Similarity=0.123 Sum_probs=217.8
Q ss_pred EEeecCCcccccCCCCCHHHHHHHHHHHhhcc---ccccccCChHHHHHHHHHHhhCCCC---CCEEEEeCChHHHHHHH
Q 011777 98 YLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQ---HATTIYLHHAIADFAEALASKMPGN---LKVVYFVNSGTEANELA 171 (477)
Q Consensus 98 ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~---~~~~~~~~~~~~~l~~~La~~~~~~---~~~v~~~~sGseA~~~A 171 (477)
++|+..|... +. .++.+.+|+.+.+.... +....+..+.+..+++.+++.++.+ .+.+++++|+++++..+
T Consensus 29 ~~~l~~g~~~--~~-~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~~ 105 (389)
T PRK05957 29 TISLGQGVVS--YP-PPPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMNA 105 (389)
T ss_pred eEEccCCCCC--CC-CCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHHH
Confidence 5676666543 33 57889999988765432 2222334466788888888877643 46899999999999988
Q ss_pred HHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCC
Q 011777 172 MLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGK 251 (477)
Q Consensus 172 l~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~ 251 (477)
+.... .+++.|++.+++|.......... |+..+.++.. ..+..| .+++++.++ ++
T Consensus 106 ~~~~~--~~gd~Vlv~~P~y~~~~~~~~~~-------------g~~~~~v~~~--~~~~~d----~~~l~~~i~----~~ 160 (389)
T PRK05957 106 ILAIT--DPGDEIILNTPYYFNHEMAITMA-------------GCQPILVPTD--DNYQLQ----PEAIEQAIT----PK 160 (389)
T ss_pred HHHhc--CCCCEEEEeCCCCcCHHHHHHhc-------------CCEEEEeecC--CCCCcC----HHHHHHhcC----cC
Confidence 87653 36678999889886653322111 2232222221 111111 477777765 34
Q ss_pred eeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccc-cccC---CCcceeeeccccc-Cc
Q 011777 252 VAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGF-ETQG---VIPDIVTMAKGIG-NG 326 (477)
Q Consensus 252 ~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~-~~~g---v~pDivt~sK~lg-~G 326 (477)
+++|++...++++| ...+++.+++|.++|++||+++|+||+|.+|.+.+...... ...+ ....+-+|||.+| .|
T Consensus 161 ~klv~~~~p~NPtG-~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G 239 (389)
T PRK05957 161 TRAIVTISPNNPTG-VVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFAS 239 (389)
T ss_pred ceEEEEeCCCCCCC-cCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCcc
Confidence 55666665677777 45578889999999999999999999999886543111111 1112 2233457999998 69
Q ss_pred cceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhc--hhhHHHHHHHHHHHHHHHHHHHHHhCCCc-eeeec
Q 011777 327 LPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVID--KERRQAHCADVGSHLLGRLRTLQERHDII-GDVRG 403 (477)
Q Consensus 327 ~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~--~~~~~~~~~~~~~~l~~~L~~l~~~~~~~-~~v~g 403 (477)
+|+||+++++++++.+.........+.+.+++.++..+|+.-. -++..++++++.+.+.+.|++ .+.+ ...+.
T Consensus 240 lRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~----~~~~~~~~~~ 315 (389)
T PRK05957 240 WRIGYMVIPIHLLEAIKKIQDTILICPPVVSQYAALGALQVGKSYCQQHLPEIAQVRQILLKSLGQ----LQDRCTLHPA 315 (389)
T ss_pred ceeEEEecCHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHh----cCCCccccCC
Confidence 9999999999999988765444445667788888888775311 122334444455555554443 3221 21223
Q ss_pred c-ceeEEEEEeeCCCCCCccHHHHHHHHHHHH-HcCceeeccCCC----CCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 404 R-GLMVGMELVTDRKEKTPAKAETAVLFEKLR-ELGVLVGKGGLH----GNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 404 ~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~----~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
. |+++|+++..+ ....++.+.|+ ++||.+.|+..+ ++++||+... .+++++++++++|.+.+++
T Consensus 316 ~gg~~~~~~~~~~--------~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~-~~~~~l~~~~~~l~~~~~~ 385 (389)
T PRK05957 316 NGAFYCFLKVNTD--------LNDFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYGA-LQKATAKEGIERLVQGLKT 385 (389)
T ss_pred CeeEEEEEeCCCC--------CChHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEec-CCHHHHHHHHHHHHHHHHh
Confidence 3 66778876321 12456777776 589999997433 4589997643 4789999999999988765
No 145
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.94 E-value=3.9e-24 Score=216.59 Aligned_cols=338 Identities=13% Similarity=0.050 Sum_probs=207.5
Q ss_pred CCEEEeecCCcccccCCCCCHHHHHHHHHHHhhcc---ccccccCChHHHHHHHHHHhhCC--CCCC-EEEEeCChHHHH
Q 011777 95 GRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQ---HATTIYLHHAIADFAEALASKMP--GNLK-VVYFVNSGTEAN 168 (477)
Q Consensus 95 G~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~---~~~~~~~~~~~~~l~~~La~~~~--~~~~-~v~~~~sGseA~ 168 (477)
|..++|+..|... ++ .++.+.+++.+.+.... +....+..+.+..+++.+.+..+ .+.+ .|++|+|+++++
T Consensus 30 ~~~~i~l~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~~i 106 (385)
T PRK09276 30 GVDVISLGIGDPD--LP-TPDHIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADWYKRRFGVELDPETEVISLIGSKEGI 106 (385)
T ss_pred CCCEEEecCCCCC--CC-CCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHH
Confidence 4457888877542 33 46789999988776421 11111223445555555554433 2344 588999999999
Q ss_pred HHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccC
Q 011777 169 ELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGT 248 (477)
Q Consensus 169 ~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~ 248 (477)
..+++... .+++.|++.+++|.++....... |...+.+|......+..| ++++++.+.
T Consensus 107 ~~~~~~~~--~~gd~Vl~~~P~y~~~~~~~~~~-------------g~~~~~v~~~~~~g~~~d----~~~l~~~~~--- 164 (385)
T PRK09276 107 AHIPLAFV--NPGDVVLVPDPGYPVYKIGTIFA-------------GGEPYFMPLKEENGFLPD----LDAIPEDVA--- 164 (385)
T ss_pred HHHHHHhC--CCCCEEEEcCCCCcChHHHHHHc-------------CCEEEEEecCCCCCCcCC----HHHHHHhcc---
Confidence 99888654 35678999999998765443322 222222221111112111 355655554
Q ss_pred CCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCC---ccccc-cCCCcceeeeccccc
Q 011777 249 SGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHY---WGFET-QGVIPDIVTMAKGIG 324 (477)
Q Consensus 249 ~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~---~~~~~-~gv~pDivt~sK~lg 324 (477)
.++++|++++.+|++|. ..+.+.+++|.++|++||+++|+||+|..|...+... ..++. .+....+.+|||.+|
T Consensus 165 -~~~~~v~l~~p~NPtG~-~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g 242 (385)
T PRK09276 165 -KKAKLMFINYPNNPTGA-VADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYN 242 (385)
T ss_pred -ccceEEEEeCCCCCCCC-CCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhcC
Confidence 24556666644666774 5688889999999999999999999999875443111 11111 223344568999998
Q ss_pred -CccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeec
Q 011777 325 -NGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRG 403 (477)
Q Consensus 325 -~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g 403 (477)
.|+|+||+++++++++.+.........+.+++.+.++.++|+. .+.+.+++++..+..++.+.+..++++. ....+
T Consensus 243 ~~GlRiG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~l~~~L~~~~~-~~~~~ 319 (385)
T PRK09276 243 MTGWRIGFAVGNADLIAGLGKVKSNVDSGVFQAIQEAGIAALNG--PQEVVEELRKIYQERRDILVEGLRKLGL-EVEPP 319 (385)
T ss_pred CcchhheeeeCCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHcC--cHHHHHHHHHHHHHHHHHHHHHHHhCCC-cccCC
Confidence 6999999999999998886543333345566777777777753 2334344433333333444333333332 22233
Q ss_pred c-ceeEEEEEeeCCCCCCccHHHHHHHHHHHH-HcCceeeccCCC----CCEEEEeCCCCCcHHHHHHHHHHHHH
Q 011777 404 R-GLMVGMELVTDRKEKTPAKAETAVLFEKLR-ELGVLVGKGGLH----GNVFRIKPPMCFTKDDADFLVDALDY 472 (477)
Q Consensus 404 ~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~----~~~iRi~p~~~~t~e~i~~~l~~l~~ 472 (477)
. |.++++.+... ....++.+.|+ ++||.+.++..+ .+++||+.. .+++++.+++++|.+
T Consensus 320 ~~~~~~~v~~~~~--------~~~~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~--~~~~~l~~~l~~l~~ 384 (385)
T PRK09276 320 KATFYVWAPVPKG--------YTSAEFATLLLDKAGVVVTPGNGFGEYGEGYFRIALT--VPDERIEEAVERIKK 384 (385)
T ss_pred CcceEEEEECCCC--------CCHHHHHHHHHHhCCEEECCchhhCCCCCCeEEEEeC--CCHHHHHHHHHHHhh
Confidence 3 55577776321 12456777776 579999987432 368999764 578899999988864
No 146
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.94 E-value=1.2e-23 Score=214.41 Aligned_cols=352 Identities=14% Similarity=0.067 Sum_probs=213.6
Q ss_pred EeCCCCEEEeecCCcccc--cCCCCCHHHHHHHHHHHhhc--c-ccccccCChHHHHHHHHHHhhC--CCCCCEEEEeCC
Q 011777 91 FDENGRRYLDAFAGIVTV--SCGHCHPDVLNAIFEQSKLL--Q-HATTIYLHHAIADFAEALASKM--PGNLKVVYFVNS 163 (477)
Q Consensus 91 ~d~dG~~ylD~~~g~~~~--~lGh~~p~v~~Av~~~l~~~--~-~~~~~~~~~~~~~l~~~La~~~--~~~~~~v~~~~s 163 (477)
-..+|+..|++..|.+.. .+. .+|.+.+++.+.++.. . |....+..+.+..+++.+.+.. +.+.++|++|+|
T Consensus 27 ~~~~~~~~i~l~~G~p~~~~~~~-~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~I~it~G 105 (409)
T PLN00143 27 NEDDHRLAISFGFGDPSCFECFR-TTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQLSPDDVYLTLG 105 (409)
T ss_pred ccCCCCceeeCCCCCCCCCCCCC-CCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHhhEEEecC
Confidence 345678899988776531 122 5788889998877642 1 2122233455566666665543 345678999999
Q ss_pred hHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHH
Q 011777 164 GTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDH 243 (477)
Q Consensus 164 GseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~ 243 (477)
+++|+..+++... .+++.|++.+++|+++.......+ ...+.++......+..| +++++++
T Consensus 106 ~~~al~~~~~~l~--~~gd~v~v~~P~y~~~~~~~~~~g-------------~~~~~~~~~~~~~~~~d----~~~l~~~ 166 (409)
T PLN00143 106 CKHAAEIIIKVLA--RPEANILLPRPGFPDVETYAIFHH-------------LEIRHFDLLPEKGWEVD----LDAVEAI 166 (409)
T ss_pred hHHHHHHHHHHHc--CCCCEEEEcCCCCcCHHHHHHHcC-------------CEEEEEeccCCCCCcCC----HHHHHHh
Confidence 9999999988653 356789999999988754433322 11111111000111111 4677776
Q ss_pred HhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCC---cceeeec
Q 011777 244 IDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVI---PDIVTMA 320 (477)
Q Consensus 244 i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~---pDivt~s 320 (477)
++ .+..+.++++| +|++| .+++.+.+++|.++|++|+++||+||+|..|.+.+..+..+....-. .-+-+||
T Consensus 167 ~~---~~~~~~~~~nP-~NPTG-~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~vi~~~SfS 241 (409)
T PLN00143 167 AD---ENTIAMVIINP-GNPCG-SVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSIS 241 (409)
T ss_pred cc---cCCEEEEEECC-CCCCC-CccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhcccCcEEEEccch
Confidence 64 34556777777 45666 56688999999999999999999999999886655211121112111 2233699
Q ss_pred cccc-CccceEEEEeC--HHHH------HhhcccccccCCCCcHHHHHHHHHHHHhhch---hhHHHHHHHHHHHHHHHH
Q 011777 321 KGIG-NGLPLGAVVTT--PEIA------NVMAQKIQFNTFGGNPVCSAGGLAVLRVIDK---ERRQAHCADVGSHLLGRL 388 (477)
Q Consensus 321 K~lg-~G~pig~v~~~--~~~~------~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~---~~~~~~~~~~~~~l~~~L 388 (477)
|.++ .|+|+||++++ +++. +.+........+ .+.+++.++.++|+.... ++..+++++..+++.+.|
T Consensus 242 K~f~~pGlRvG~~v~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L 320 (409)
T PLN00143 242 KRWMIPGWGLGWLVTCDPSGLLQICEIADSIKKALNPAPF-PPTFIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKL 320 (409)
T ss_pred hhcCCCccceEEEEeeCchhhhhhHHHHHHHHHHHhccCC-CCchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHH
Confidence 9977 59999999983 3332 223222222233 467888888888753111 223334444444444443
Q ss_pred HHHHHhCCCce--eeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCC--CCEEEEeCCCCCcHHHHH
Q 011777 389 RTLQERHDIIG--DVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLH--GNVFRIKPPMCFTKDDAD 464 (477)
Q Consensus 389 ~~l~~~~~~~~--~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~--~~~iRi~p~~~~t~e~i~ 464 (477)
.+ .+... ..+..|+++|+++...... ........+.+.+.++||.+.|+..+ .+++||+.. .++++++
T Consensus 321 ~~----~~~~~~~~~p~gg~f~w~~l~~~~~~--~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRi~~~--~~~~~l~ 392 (409)
T PLN00143 321 KE----IPCIMCPQKAEGAFFALVKLNLLLLE--DIEDDMEFCLKLAKEESLIILPGVTVGLKNWLRITFA--VEQSSLE 392 (409)
T ss_pred hc----CCCCCCCCCCCeeEEEEEecchhhcC--CCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEEc--CCHHHHH
Confidence 33 33222 1223477888887421000 00011233345667899999998544 478999754 5799999
Q ss_pred HHHHHHHHHHhh
Q 011777 465 FLVDALDYSMSK 476 (477)
Q Consensus 465 ~~l~~l~~~l~~ 476 (477)
+++++|.+++.+
T Consensus 393 ~al~rl~~~l~~ 404 (409)
T PLN00143 393 DGLGRLKSFCGR 404 (409)
T ss_pred HHHHHHHHHHHH
Confidence 999999998753
No 147
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.94 E-value=5.2e-24 Score=202.15 Aligned_cols=328 Identities=13% Similarity=0.087 Sum_probs=228.7
Q ss_pred CCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCC--CCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccC
Q 011777 113 CHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPG--NLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNA 190 (477)
Q Consensus 113 ~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~--~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~ 190 (477)
.+|+|++|++++++.+.++++....+...++..+.+++... +.+.++|+++.--++..+++.... .++.|++..|.
T Consensus 39 ~pp~i~~Al~~rvdhGvfGY~~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi~~~I~~~T~--~gd~Vvi~tPv 116 (388)
T COG1168 39 TPPEIIEALRERVDHGVFGYPYGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGISLAIRALTK--PGDGVVIQTPV 116 (388)
T ss_pred CCHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHhHHHHHHHhCc--CCCeeEecCCC
Confidence 58999999999999876555533344778888888888653 456899999999999999986544 67889999999
Q ss_pred ccCCcccccccccCCCCCCCCCCCCeeeecCCCCcC-CCCCCCHHHHHHHHHHHHhccCCCCe-eEEEecccCCCCCeee
Q 011777 191 YHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYH-GSFGSDAARYAQDLQDHIDFGTSGKV-AGFIAETIQGVGGAVE 268 (477)
Q Consensus 191 yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~le~~i~~~~~~~~-a~vi~epi~~~~G~~~ 268 (477)
||-........ +...+..|..+. ..+..| +++||+.+. .+++ ..|+|+|.| ++| .+
T Consensus 117 Y~PF~~~i~~n-------------~R~~i~~pL~~~~~~y~iD----~~~LE~~~~---~~~vkl~iLCnPHN-P~G-rv 174 (388)
T COG1168 117 YPPFYNAIKLN-------------GRKVIENPLVEDDGRYEID----FDALEKAFV---DERVKLFILCNPHN-PTG-RV 174 (388)
T ss_pred chHHHHHHhhc-------------CcEEEeccccccCCcEEec----HHHHHHHHh---cCCccEEEEeCCCC-CCC-cc
Confidence 98654332221 233333332211 111111 688998887 3444 455666654 455 78
Q ss_pred CCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCcccccc-----CCCcceeeeccccc-CccceEEEEeC-HHHHHh
Q 011777 269 LAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQ-----GVIPDIVTMAKGIG-NGLPLGAVVTT-PEIANV 341 (477)
Q Consensus 269 ~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~-----gv~pDivt~sK~lg-~G~pig~v~~~-~~~~~~ 341 (477)
++++.|.+|.+||++||+.+|+||+++.+-..|.+++.+... +...-+++-||+|+ +|+..++++.+ +++.+.
T Consensus 175 wt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~lr~~ 254 (388)
T COG1168 175 WTKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRELRAK 254 (388)
T ss_pred ccHHHHHHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecCHHHHHH
Confidence 999999999999999999999999999998777444333211 11111233479999 69999987775 555454
Q ss_pred hcc-cccccCCCCcHHHHHHHHHHHHhhch--hhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeE-EEEEeeCCC
Q 011777 342 MAQ-KIQFNTFGGNPVCSAGGLAVLRVIDK--ERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMV-GMELVTDRK 417 (477)
Q Consensus 342 ~~~-~~~~~t~~~~~~~~aaa~a~l~~l~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~-~i~~~~~~~ 417 (477)
+.. ....+..+.|.+++.|..++++..++ +++.+.++.+.+++.+.+++. .|.+....++|.++ |+++..-..
T Consensus 255 ~~~~l~~~~~~~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~~---~P~v~v~~p~gTYL~WLD~r~l~l 331 (388)
T COG1168 255 FLKRLKRNGLHGPSALGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNKH---LPGVKVTEPQGTYLAWLDCRELGL 331 (388)
T ss_pred HHHHHHHhcCCCCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhh---CCCcEEecCCCceeeeeeccccCC
Confidence 433 33445667899999999999987654 567777888888887777663 47777788888866 777753211
Q ss_pred CCCccHHHHHHHHHHHHH-cCceeeccCCC----CCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 418 EKTPAKAETAVLFEKLRE-LGVLVGKGGLH----GNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 418 ~~~~~~~~~~~~~~~l~~-~Gv~v~~~~~~----~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
...++.+.|++ .+|.+.+|..+ .+++|+ ++..+++-+++++++|.+++++
T Consensus 332 -------~d~~l~~~ll~~akVal~~G~~FG~~g~gf~Rl--N~acpr~~L~eal~ri~~al~~ 386 (388)
T COG1168 332 -------DDSELAEFLLEEAKVALSPGSTFGEEGSGFVRL--NFACPRAILEEALERLKRALKK 386 (388)
T ss_pred -------ChHHHHHHHHHhhcEeccCCCccCcCCCceEEE--ecCCCHHHHHHHHHHHHHHHhc
Confidence 11345555554 46777776333 378999 5788999999999999999875
No 148
>PRK09082 methionine aminotransferase; Validated
Probab=99.94 E-value=2.6e-24 Score=217.77 Aligned_cols=339 Identities=13% Similarity=0.053 Sum_probs=214.1
Q ss_pred CEEEeecCCcccccCCCCCHHHHHHHHHHHhhcc--ccccccCChHHHHHHHHHHhhCCCC--C-CEEEEeCChHHHHHH
Q 011777 96 RRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQ--HATTIYLHHAIADFAEALASKMPGN--L-KVVYFVNSGTEANEL 170 (477)
Q Consensus 96 ~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~--~~~~~~~~~~~~~l~~~La~~~~~~--~-~~v~~~~sGseA~~~ 170 (477)
+.++||..|... ++ .++.+.+++.+.++... +....+..+.+..+++++.+.++.. . +++++|+|+++|+..
T Consensus 30 ~~~i~l~~g~~~--~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al~~ 106 (386)
T PRK09082 30 HGAINLSQGFPD--FD-GPPYLVEALAYAMAAGHNQYPPMTGVAALREAIAAKTARLYGRQYDADSEITVTAGATEALFA 106 (386)
T ss_pred CCEEEecCCCCC--CC-CCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHHHH
Confidence 346888887653 33 47889999888776432 1112233455677888877765432 2 379999999999999
Q ss_pred HHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCC
Q 011777 171 AMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSG 250 (477)
Q Consensus 171 Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~ 250 (477)
+++... .+++.|++.+++|.+........ |...+.++.... .+..| .+++++.++ .
T Consensus 107 ~~~~~~--~~gd~Vli~~p~y~~~~~~~~~~-------------g~~~~~~~~~~~-~~~~d----~~~l~~~~~----~ 162 (386)
T PRK09082 107 AILALV--RPGDEVIVFDPSYDSYAPAIELA-------------GGRAVRVALQPP-DFRVD----WQRFAAAIS----P 162 (386)
T ss_pred HHHHHc--CCCCEEEEeCCCchhhHHHHHHc-------------CCEEEEEecCcc-cccCC----HHHHHHhcC----c
Confidence 998653 35678999999887764433222 222222222110 11111 466777665 3
Q ss_pred CeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccc-cccCCCcc---eeeeccccc-C
Q 011777 251 KVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGF-ETQGVIPD---IVTMAKGIG-N 325 (477)
Q Consensus 251 ~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~-~~~gv~pD---ivt~sK~lg-~ 325 (477)
++++|++...++++|. .++++.+++|.++|++||+++|+||+|..+...+.....+ ...+.... +-+|||.+| .
T Consensus 163 ~~~~v~l~~p~NPtG~-~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~ 241 (386)
T PRK09082 163 RTRLIILNTPHNPSGT-VWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVT 241 (386)
T ss_pred cceEEEEeCCCCCCCc-CCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccch
Confidence 4566666655677774 4578889999999999999999999998775544111111 22222222 337999998 6
Q ss_pred ccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccc
Q 011777 326 GLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRG 405 (477)
Q Consensus 326 G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g 405 (477)
|+|+||+++++++++.+........++.+.+++.++.+.++. .+++.+++++..+..++.+.+...+++.......-|
T Consensus 242 G~RiG~iv~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~g~ 319 (386)
T PRK09082 242 GWKVGYCVAPAALSAEFRKVHQYNTFTVNTPAQLALADYLRA--EPEHYLELPAFYQAKRDRFRAALANSRFKLLPCEGT 319 (386)
T ss_pred hhhhhhhhCCHHHHHHHHHHHhhhcCCCChHHHHHHHHHHhC--ChHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCee
Confidence 999999999999998887665556677888888887777752 233333333333333333333333333222222335
Q ss_pred eeEEEEEeeCCCCCCccHHHHHHHHHHH-HHcCceeeccCCC------CCEEEEeCCCCCcHHHHHHHHHHHHH
Q 011777 406 LMVGMELVTDRKEKTPAKAETAVLFEKL-RELGVLVGKGGLH------GNVFRIKPPMCFTKDDADFLVDALDY 472 (477)
Q Consensus 406 ~~~~i~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~~~------~~~iRi~p~~~~t~e~i~~~l~~l~~ 472 (477)
.++|+++..-. .....++.+.| .++||.+.|+..+ .+++||+.+ .+++++++++++|.+
T Consensus 320 ~~~~~~~~~~~------~~~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~~--~~~~~l~~~~~rl~~ 385 (386)
T PRK09082 320 YFQLVDYSAIS------DLDDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCFA--KQEETLDAAAERLCQ 385 (386)
T ss_pred EEEEEeccccC------CCCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEec--CCHHHHHHHHHHHhh
Confidence 66777773200 01235676665 5789999987533 368999755 579999999999875
No 149
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.94 E-value=3.2e-24 Score=215.43 Aligned_cols=323 Identities=14% Similarity=0.087 Sum_probs=211.2
Q ss_pred CCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCCCCEEEE-eCChHHHHHHH
Q 011777 93 ENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGNLKVVYF-VNSGTEANELA 171 (477)
Q Consensus 93 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~-~~sGseA~~~A 171 (477)
.+++.++||..+.. .+| .+|.+.+++.+.+.... .|+.+...++++.++++++.+.+++++ ++|.++++..+
T Consensus 31 ~~~~~~i~l~~~~~--~~~-~~~~~~~~~~~~~~~~~----~y~~~~~~~lr~~ia~~~~~~~~~i~~~~~Ga~~~i~~~ 103 (361)
T PRK00950 31 IDPESIIKLGSNEN--PLG-PSPKAVEAIEKELSKIH----RYPEPDAPELREALSKYTGVPVENIIVGGDGMDEVIDTL 103 (361)
T ss_pred CCccceEEccCCCC--CCC-CCHHHHHHHHHHHHhhc----CCCCCCHHHHHHHHHHHhCCCHHHEEEeCCCHHHHHHHH
Confidence 46678999987653 466 57899999988776432 244444578999999998776778888 67778888888
Q ss_pred HHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCC
Q 011777 172 MLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGK 251 (477)
Q Consensus 172 l~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~ 251 (477)
++... .+++.|++.+++|..+....... |.....++... .+..+ ++++++.+. .+
T Consensus 104 ~~~~~--~~gd~vlv~~p~y~~~~~~~~~~-------------g~~~~~~~~~~--~~~~~----~~~l~~~~~----~~ 158 (361)
T PRK00950 104 MRTFI--DPGDEVIIPTPTFSYYEISAKAH-------------GAKPVYAKREE--DFSLD----VDSVLNAIT----EK 158 (361)
T ss_pred HHHhc--CCCCEEEEcCCChHHHHHHHHHc-------------CCEEEEeecCC--CCCcC----HHHHHHHhc----cC
Confidence 87542 35677888888887653322211 22222222111 11111 467777664 24
Q ss_pred eeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccc-cccCCCcceeeeccccc-Cccce
Q 011777 252 VAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGF-ETQGVIPDIVTMAKGIG-NGLPL 329 (477)
Q Consensus 252 ~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~-~~~gv~pDivt~sK~lg-~G~pi 329 (477)
++++++...++++|.+.+ .+++.++|+++|+++|+||+|.+|. .+ ..... +..+....+-+|||.+| .|+|+
T Consensus 159 ~~~v~~~~p~nptG~~~~----~~~l~~l~~~~~~~li~De~y~~~~-~~-~~~~~~~~~~~vi~~~S~SK~~g~~GlRi 232 (361)
T PRK00950 159 TKVIFLCTPNNPTGNLIP----EEDIRKILESTDALVFVDEAYVEFA-EY-DYTPLALEYDNLIIGRTFSKVFGLAGLRI 232 (361)
T ss_pred CCEEEEeCCCCCCCCCcC----HHHHHHHHHHCCcEEEEECchhhhC-cc-chHHHHHhcCCEEEEEeehHhhcCchhhc
Confidence 555555455677777776 6788889999999999999998874 12 22111 11222223348999999 69999
Q ss_pred EEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEE
Q 011777 330 GAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVG 409 (477)
Q Consensus 330 g~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~ 409 (477)
||+++++++++.+.... .+++.++++++++.++++ +.++.++..+..+..++.+.+.. . +...+..|.+++
T Consensus 233 G~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~l~---~~~~~~~~~~~~~~~r~~l~~~l---~-~~~~~~~~~~i~ 303 (361)
T PRK00950 233 GYGFVPEWLIDYYMRAK--TPFSLTRLSQAAAIAALS---DKEYIEKSIEHGIKSREYLYNEL---P-FKVYPSEANFVL 303 (361)
T ss_pred chhcCCHHHHHHHHHhc--CCCCCCHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHhhc---C-eeECCCcceEEE
Confidence 99999999988776533 345677888888877775 33444444444444444443322 1 112234577778
Q ss_pred EEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCC----CCEEEEeCCCCCcHHHHHHHHHHHHHHH
Q 011777 410 MELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLH----GNVFRIKPPMCFTKDDADFLVDALDYSM 474 (477)
Q Consensus 410 i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~----~~~iRi~p~~~~t~e~i~~~l~~l~~~l 474 (477)
+.+.. ....++.+.|.++||.+.++..+ .+++||++. +++++++++++|++++
T Consensus 304 ~~~~~---------~~~~~~~~~l~~~gv~v~~~~~f~~~~~~~lRis~~---~~~~~~~l~~~L~~il 360 (361)
T PRK00950 304 VDVTP---------MTAKEFCEELLKRGVIVRDCTSFRGLGDYYIRVSIG---TFEENERFLEILKEIV 360 (361)
T ss_pred EECCC---------CCHHHHHHHHHHCCEEEeeCCccCCCCCCeEEEECC---CHHHHHHHHHHHHHHh
Confidence 77721 12457888899999999886432 368999754 7889999999999876
No 150
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.93 E-value=1.7e-23 Score=214.08 Aligned_cols=351 Identities=16% Similarity=0.095 Sum_probs=209.4
Q ss_pred CCEEEeecCCcccccCCC-CCHHHHHHHHHHHhhcc---ccccccCChHHHHHHHHHHhhCC--CCCCEEEEeCChHHHH
Q 011777 95 GRRYLDAFAGIVTVSCGH-CHPDVLNAIFEQSKLLQ---HATTIYLHHAIADFAEALASKMP--GNLKVVYFVNSGTEAN 168 (477)
Q Consensus 95 G~~ylD~~~g~~~~~lGh-~~p~v~~Av~~~l~~~~---~~~~~~~~~~~~~l~~~La~~~~--~~~~~v~~~~sGseA~ 168 (477)
|+.+|++..|.+...-.. .++++.+++.+.++... +....+..+.++.+++.+....+ .+.++|++|+|+++|+
T Consensus 51 ~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~al 130 (430)
T PLN00145 51 PRPVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYNSYSTCVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAI 130 (430)
T ss_pred CCCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCCCCCCCccCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHHHH
Confidence 788999888765321111 36789999998886532 11112233445555555544332 2457899999999999
Q ss_pred HHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccC
Q 011777 169 ELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGT 248 (477)
Q Consensus 169 ~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~ 248 (477)
..+++... .+++.|++.+++|+.+.......+. .+..++... ...+.-| +++++++++
T Consensus 131 ~l~~~~l~--~~Gd~Vlv~~P~y~~y~~~~~~~g~-----------~~~~~~~~~--~~~~~~d----~~~l~~~~~--- 188 (430)
T PLN00145 131 EIIMSVLA--QPGANILLPRPGYPLYEARAVFSGL-----------EVRHFDLLP--ERGWEVD----LEGVEALAD--- 188 (430)
T ss_pred HHHHHHhc--CCCCEEEEcCCCCccHHHHHHHcCC-----------EEEEeeCCc--ccCCcCC----HHHHHHHhC---
Confidence 99988653 3567899999999876443322221 112221110 1112112 467777765
Q ss_pred CCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCC---cceeeeccccc-
Q 011777 249 SGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVI---PDIVTMAKGIG- 324 (477)
Q Consensus 249 ~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~---pDivt~sK~lg- 324 (477)
++..+++++.| +|++| .+.+.+.+++|.++|++||+++|+||+|..|.+.+..+..+...+-. .-+-+|||.++
T Consensus 189 ~~~~~i~i~~P-~NPtG-~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~ 266 (430)
T PLN00145 189 ENTVAMVIINP-NNPCG-SVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVAPVLTLGSISKRWVV 266 (430)
T ss_pred cCceEEEEeCC-CCCCC-CCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhcccCcEEEEeccccccCC
Confidence 34456666777 45666 56688899999999999999999999999886544222222111111 22336999977
Q ss_pred CccceEEEEe--CHHHHH------hhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCC
Q 011777 325 NGLPLGAVVT--TPEIAN------VMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHD 396 (477)
Q Consensus 325 ~G~pig~v~~--~~~~~~------~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~ 396 (477)
.|||+||+++ ++++++ .+.... ..+.+.+.+.|.|+..+|+.- .+++.++.++..+..++.+.+..++++
T Consensus 267 pG~RlG~iv~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Q~a~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~L~~~~ 344 (430)
T PLN00145 267 PGWRLGWIATCDPNGILKETKVVDSIRNYL-NISTDPATFVQGAIPQIIANT-KEEFFTKTLGLLKETADICYEKIKEIK 344 (430)
T ss_pred CCeeEEEEEEecchhhhhhhHHHHHHHHHh-cccCCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 5999999997 344332 222211 122245678888888888631 133333333333333333333333444
Q ss_pred Ccee-eec-cceeEEEEEeeCCCCCCccHHHHHHHH-HHHHHcCceeeccCCCC--CEEEEeCCCCCcHHHHHHHHHHHH
Q 011777 397 IIGD-VRG-RGLMVGMELVTDRKEKTPAKAETAVLF-EKLRELGVLVGKGGLHG--NVFRIKPPMCFTKDDADFLVDALD 471 (477)
Q Consensus 397 ~~~~-v~g-~g~~~~i~~~~~~~~~~~~~~~~~~~~-~~l~~~Gv~v~~~~~~~--~~iRi~p~~~~t~e~i~~~l~~l~ 471 (477)
.+.. ..+ -|+++++.+..... +......+++ +.+.++||++.|+..++ +++||+.. .+++++++++++|.
T Consensus 345 g~~~~~~P~ga~y~~v~l~~~~~---~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~lRis~~--~~~~~l~~al~rl~ 419 (430)
T PLN00145 345 CITCPHKPEGSMFVMVKLDLSCL---SGIKDDMDFCCKLAKEESVVVLPGSALGMKNWLRITFA--IDPPSLEDGLERLK 419 (430)
T ss_pred CCCCCcCCCeeeEEEeccChhhc---CCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeC--CCHHHHHHHHHHHH
Confidence 3332 233 45666776632100 0000123344 55567899999985443 89999755 58899999999999
Q ss_pred HHHhh
Q 011777 472 YSMSK 476 (477)
Q Consensus 472 ~~l~~ 476 (477)
+++.+
T Consensus 420 ~~~~~ 424 (430)
T PLN00145 420 SFCLR 424 (430)
T ss_pred HHHHH
Confidence 98854
No 151
>PRK08912 hypothetical protein; Provisional
Probab=99.93 E-value=6.7e-24 Score=214.99 Aligned_cols=342 Identities=15% Similarity=0.055 Sum_probs=211.7
Q ss_pred EEEeecCCcccccCCCCCHHHHHHHHHHHhhcc--ccccccCChHHHHHHHHHHhhCC--CCCC-EEEEeCChHHHHHHH
Q 011777 97 RYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQ--HATTIYLHHAIADFAEALASKMP--GNLK-VVYFVNSGTEANELA 171 (477)
Q Consensus 97 ~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~--~~~~~~~~~~~~~l~~~La~~~~--~~~~-~v~~~~sGseA~~~A 171 (477)
..+||..|... .+ .++.+.+++.+.+.... +....+..+.++.+++.+.+..+ .+.+ +|++|+|+++|+..+
T Consensus 27 ~~i~l~~g~p~--~~-~p~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~ 103 (387)
T PRK08912 27 GAINLGQGFPD--DP-GPEDVRRAAADALLDGSNQYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEALAAA 103 (387)
T ss_pred CeEEccCCCCC--CC-CCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHHHHHH
Confidence 46888888764 33 36788888887765321 11112233455566666654433 3455 899999999999888
Q ss_pred HHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCC
Q 011777 172 MLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGK 251 (477)
Q Consensus 172 l~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~ 251 (477)
+.... .+++.|++.+++|.++...+... |...+.++... ..+..| .+++++.+. .+
T Consensus 104 ~~~~~--~~gd~Vlv~~p~y~~~~~~~~~~-------------g~~~~~~~~~~-~~~~~~----~~~l~~~~~----~~ 159 (387)
T PRK08912 104 LLALV--EPGDEVVLFQPLYDAYLPLIRRA-------------GGVPRLVRLEP-PHWRLP----RAALAAAFS----PR 159 (387)
T ss_pred HHHhc--CCCCEEEEeCCCchhhHHHHHHc-------------CCEEEEEecCc-ccCcCC----HHHHHHHhC----cc
Confidence 87543 35678999999998765443222 22222221110 011111 467777665 24
Q ss_pred eeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccc-cccCC---Ccceeeeccccc-Cc
Q 011777 252 VAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGF-ETQGV---IPDIVTMAKGIG-NG 326 (477)
Q Consensus 252 ~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~-~~~gv---~pDivt~sK~lg-~G 326 (477)
++++++...+|++| ...+.+.+++|.++|++|++++|+||+|..|...+.....+ ...+. ..-+-+|||.+| .|
T Consensus 160 ~~~v~l~~p~NPtG-~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G 238 (387)
T PRK08912 160 TKAVLLNNPLNPAG-KVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTG 238 (387)
T ss_pred ceEEEEeCCCCCcC-cccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcC
Confidence 44455444466667 45678889999999999999999999998775544111111 11122 222347899999 79
Q ss_pred cceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeecc-c
Q 011777 327 LPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGR-G 405 (477)
Q Consensus 327 ~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~-g 405 (477)
+|+||+++++++++.+.......+++.++..+.++.+++.. .+++.+++++..+..++.+.+....++. ....+. |
T Consensus 239 lRiG~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~g~ 315 (387)
T PRK08912 239 WKVGFVCAAPPLLRVLAKAHQFLTFTTPPNLQAAVAYGLGK--PDDYFEGMRADLARSRDRLAAGLRRIGF-PVLPSQGT 315 (387)
T ss_pred ceeEEEecCHHHHHHHHHHHhhccccCChHHHHHHHHHHhC--CHHHHHHHHHHHHHHHHHHHHHHHhCCC-cccCCCcc
Confidence 99999999999998886654445577777777777777742 2333333333333333333333333332 222333 5
Q ss_pred eeEEEEEeeCCCCCCccHHHHHHHHHHHH-HcCceeeccCCC------CCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 406 LMVGMELVTDRKEKTPAKAETAVLFEKLR-ELGVLVGKGGLH------GNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 406 ~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~------~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
.++|+.+..... .....++.+.|+ ++||.+.|+..+ .+++|++.. .+++++++++++|.+++++
T Consensus 316 ~~l~~~l~~~~~-----~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~--~~~~~l~~~l~rl~~~l~~ 386 (387)
T PRK08912 316 YFLTVDLAPLGL-----AEDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFA--KRDATLDEAVERLAAARRR 386 (387)
T ss_pred eEEEecccccCC-----CCCHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEEe--CCHHHHHHHHHHHHHHHhc
Confidence 567777632100 012346777765 679999987433 378999755 4689999999999998864
No 152
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.93 E-value=5.6e-24 Score=213.02 Aligned_cols=328 Identities=13% Similarity=0.083 Sum_probs=213.2
Q ss_pred eCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHH
Q 011777 92 DENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELA 171 (477)
Q Consensus 92 d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~A 171 (477)
..++..++||..|. +++| .+|.+.+++.+.+.... .|+.....++++.++++++.+.++|++++|+++++..+
T Consensus 16 ~~~~~~~i~l~~~~--~~~~-~p~~~~~a~~~~~~~~~----~y~~~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~ 88 (356)
T PRK08056 16 GISPDQLLDFSANI--NPLG-MPVSLKRAIIDNLDCAE----RYPDVEYRHLHQALARHHQVPASWILAGNGETESIFAV 88 (356)
T ss_pred CCChhhEEEecccc--CCCC-CCHHHHHHHHHHHHhcc----cCcCccHHHHHHHHHHHhCcChhhEEECCCHHHHHHHH
Confidence 34567789988654 4566 57899999988776432 34444568899999999877778999999999999988
Q ss_pred HHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCC
Q 011777 172 MLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGK 251 (477)
Q Consensus 172 l~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~ 251 (477)
++.. .++ ++++..++|..+....... |...+.+|......+..| +++++.+. ++
T Consensus 89 ~~~l---~~g-~viv~~P~y~~~~~~~~~~-------------g~~~~~v~~~~~~~~~~~-----~~~~~~~~----~~ 142 (356)
T PRK08056 89 VSGL---KPR-RAMIVTPGFAEYRRALQQV-------------GCEIRRYSLREADGWQLT-----DAILEALT----PD 142 (356)
T ss_pred HHHh---CCC-CEEEeCCCcHHHHHHHHHc-------------CCeEEEEecccccCCCcc-----HHHHHhcc----CC
Confidence 8854 233 5777888887654332222 222222222111112211 23333332 34
Q ss_pred eeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCcc-ccccCCCcceeeeccccc-Cccce
Q 011777 252 VAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWG-FETQGVIPDIVTMAKGIG-NGLPL 329 (477)
Q Consensus 252 ~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~-~~~~gv~pDivt~sK~lg-~G~pi 329 (477)
+++|++...+|++|. ..+++.+++|.++|++||+++|+||+|.+|...+..+.. +...+...-+-+|||.++ .|+|+
T Consensus 143 ~k~v~l~~p~NPTG~-~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~Ri 221 (356)
T PRK08056 143 LDCLFLCTPNNPTGL-LPERQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQLADNPHLWVLRSLTKFYAIPGLRL 221 (356)
T ss_pred CCEEEEeCCcCCCCC-CCCHHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHHhccCCCEEEEEechhhccCcchhh
Confidence 555555545666775 678899999999999999999999999988544411111 122222222347999999 79999
Q ss_pred EEEEeC-HHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHH----HHHHHHHHHHHHHHHHHHHhCCCceeeecc
Q 011777 330 GAVVTT-PEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQ----AHCADVGSHLLGRLRTLQERHDIIGDVRGR 404 (477)
Q Consensus 330 g~v~~~-~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~----~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~ 404 (477)
||++++ +++++.+... ...++.+.+++.++.++++ .+.+. +.+++..+++.+.|+ +.+.+...+..
T Consensus 222 G~~v~~~~~~~~~l~~~--~~~~~~~~~~~~~a~~~l~---~~~~~~~~~~~~~~~r~~l~~~L~----~~~~~~~~~~~ 292 (356)
T PRK08056 222 GYLVNSDDAAVARMRRQ--QMPWSINAFAALAGEVILQ---DRAYQQATWQWLAEEGARFYQALC----ALPLLTVWPGR 292 (356)
T ss_pred eeeecCCHHHHHHHHHh--CCCCchhHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHh----cCCCcEEcCCC
Confidence 999984 6777776543 2456677788877777764 23333 333444444444443 33333333456
Q ss_pred ceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCC----CCEEEEeCCCCCcHHHHHHHHHHHHHHHh
Q 011777 405 GLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLH----GNVFRIKPPMCFTKDDADFLVDALDYSMS 475 (477)
Q Consensus 405 g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~----~~~iRi~p~~~~t~e~i~~~l~~l~~~l~ 475 (477)
|.++|+.+..+ ..++.+.|+++||.+.++..+ .+++||+. .++++.+.+++.|+++++
T Consensus 293 ~~~~~~~~~~~----------~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~---~~~~~~~~l~~~l~~~~~ 354 (356)
T PRK08056 293 ANYLFLRCERP----------DIDLQRALLTQRILIRSCANYPGLDSRYYRVAI---RSAAENERLLAALRNVLT 354 (356)
T ss_pred CcEEEEEcCCC----------hHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEE---cCHHHHHHHHHHHHHHHc
Confidence 78888776311 246788899999999887543 36899964 378999999999998765
No 153
>PRK05839 hypothetical protein; Provisional
Probab=99.93 E-value=4.5e-24 Score=215.00 Aligned_cols=332 Identities=12% Similarity=0.041 Sum_probs=210.8
Q ss_pred CCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhcc-ccccccCChHHHHHHHHHHhhCC--CCCCEEEEeCChHHHHHH
Q 011777 94 NGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQ-HATTIYLHHAIADFAEALASKMP--GNLKVVYFVNSGTEANEL 170 (477)
Q Consensus 94 dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~-~~~~~~~~~~~~~l~~~La~~~~--~~~~~v~~~~sGseA~~~ 170 (477)
.|+.++||..|... ++ .++.+.+++.+...... +....+..+.++.+++.+.+..+ .+.++|++|+|+++|+..
T Consensus 22 ~~~~~i~l~~~~p~--~~-~~~~~~~a~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~al~~ 98 (374)
T PRK05839 22 KEYKGLDLTIGEPQ--FE-TPKFIQDALKNNAHLLNKYPKSAGEESLREAQRGFFKRRFKIELKENELIPTFGTREVLFN 98 (374)
T ss_pred CCCCeEEcCCCCCC--CC-CCHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHH
Confidence 38899999887753 55 36888888877654322 22222334556677777777644 456899999999999988
Q ss_pred HHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCC
Q 011777 171 AMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSG 250 (477)
Q Consensus 171 Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~ 250 (477)
++++...-.+++.|++..++|..+....... |+..++++......+..|. ++ ..++
T Consensus 99 ~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~-------------g~~v~~v~~~~~~~~~~d~----~~--~~~~----- 154 (374)
T PRK05839 99 FPQFVLFDKQNPTIAYPNPFYQIYEGAAIAS-------------RAKVLLMPLTKENDFTPSL----NE--KELQ----- 154 (374)
T ss_pred HHHHHhcCCCCCEEEECCCCchhhHHHHHhc-------------CCEEEEeecccccCCcCCc----ch--hhhc-----
Confidence 8775432235678889999998876554332 3333333322111222111 11 1121
Q ss_pred CeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccc-cc--------cCCCcceeeecc
Q 011777 251 KVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGF-ET--------QGVIPDIVTMAK 321 (477)
Q Consensus 251 ~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~-~~--------~gv~pDivt~sK 321 (477)
++++|++...+|++| ...+++.+++|.++|++||++||+||+|..|...+ ....+ .. ++...-+-+|||
T Consensus 155 ~~k~v~i~nP~NPTG-~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~-~~~s~~~~~~~~~~~~~~~vi~~~SfSK 232 (374)
T PRK05839 155 EVDLVILNSPNNPTG-RTLSLEELIEWVKLALKHDFILINDECYSEIYENT-PPPSLLEASILVGNESFKNVLVINSISK 232 (374)
T ss_pred cccEEEEeCCCCCcC-cccCHHHHHHHHHHHHHcCCEEEeccchhhcccCC-CCCCHhhhhcccCccccCcEEEEecccc
Confidence 344555444456666 45688999999999999999999999999874332 22111 10 111222337999
Q ss_pred ccc-CccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCcee
Q 011777 322 GIG-NGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGD 400 (477)
Q Consensus 322 ~lg-~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~ 400 (477)
.++ .|+|+||+++++++++.+.......+++.+.+.+.++.+++. ++++.++.++..+..++.+.+. .+..
T Consensus 233 ~~~~~GlRiG~ii~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~---l~~~-- 304 (374)
T PRK05839 233 RSSAPGLRSGFIAGDASILKKYKAYRTYLGCASPLPLQKAAAVAWL---DDEHAEFFRNIYAKNLKLAREI---LGIT-- 304 (374)
T ss_pred ccCCccceeEEEecCHHHHHHHHHHHhhcCCCCChHHHHHHHHHhc---cchHHHHHHHHHHHHHHHHHHh---cCCC--
Confidence 987 699999999999998887654433455677777877776663 2344444443333333333332 2221
Q ss_pred eeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHH-cCceeeccCCC------CCEEEEeCCCCCcHHHHHHHHHHHHHH
Q 011777 401 VRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRE-LGVLVGKGGLH------GNVFRIKPPMCFTKDDADFLVDALDYS 473 (477)
Q Consensus 401 v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~~~------~~~iRi~p~~~~t~e~i~~~l~~l~~~ 473 (477)
.+..|+++|+.+.. ..++.+.|++ +||.+.|+..+ .+++||+. ..+++++.+++++|.++
T Consensus 305 ~p~gg~fi~~~~~~-----------~~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~--~~~~~~~~~~l~~l~~~ 371 (374)
T PRK05839 305 IPPATFYVWLPVDN-----------DEEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIAL--VYDTPKLEKALEIIKTY 371 (374)
T ss_pred CCCeeEEEEEeCCC-----------hHHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEe--cCCHHHHHHHHHHHHHH
Confidence 34457788887621 2457777764 99999987322 37999975 45799999999999988
Q ss_pred Hh
Q 011777 474 MS 475 (477)
Q Consensus 474 l~ 475 (477)
++
T Consensus 372 l~ 373 (374)
T PRK05839 372 LE 373 (374)
T ss_pred hh
Confidence 74
No 154
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.93 E-value=7.8e-24 Score=212.73 Aligned_cols=323 Identities=16% Similarity=0.072 Sum_probs=206.6
Q ss_pred CCEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCC---CCCCEEEEeCChHHHHHHH
Q 011777 95 GRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMP---GNLKVVYFVNSGTEANELA 171 (477)
Q Consensus 95 G~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~---~~~~~v~~~~sGseA~~~A 171 (477)
+..++||..|... ...+|.+.+++.+......+....+..+.+..+++++.+..+ .+.++|++|+|+++++..+
T Consensus 26 ~~~~i~l~~~~p~---~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~~I~it~G~~~~i~~~ 102 (364)
T PRK07865 26 PDGIVDLSVGTPV---DPVPPVIQEALAAAADAPGYPTTAGTPELREAIVGWLARRRGVTGLDPAAVLPVIGSKELVAWL 102 (364)
T ss_pred CCCEEEcCCCCCC---CCCCHHHHHHHHHHHhhCCCCCccCCHHHHHHHHHHHHHHcCCCCCCcccEEEccChHHHHHHH
Confidence 3456788776532 334688888887655433333223334556777777776543 4467999999999999987
Q ss_pred HHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCC
Q 011777 172 MLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGK 251 (477)
Q Consensus 172 l~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~ 251 (477)
+.+.. ..+++.|++.+++|.++....... |...+.+++ .++++ . .+
T Consensus 103 ~~~l~-~~~gd~Vl~~~p~y~~~~~~~~~~-------------g~~~~~~~~-------------~~~l~---~----~~ 148 (364)
T PRK07865 103 PTLLG-LGPGDVVVIPELAYPTYEVGARLA-------------GATVVRADS-------------LTELG---P----QR 148 (364)
T ss_pred HHHHc-CCCCCEEEECCCCcccHHHHHHhc-------------CCEEEecCC-------------hhhCC---c----cc
Confidence 66542 235678999999998764443222 222222111 12221 1 35
Q ss_pred eeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCcc-ccc--cC----CCcceeeeccccc
Q 011777 252 VAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWG-FET--QG----VIPDIVTMAKGIG 324 (477)
Q Consensus 252 ~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~-~~~--~g----v~pDivt~sK~lg 324 (477)
+++|++++.+|++|. +.+.+.+++|.++|++||+++|+||+|.+|...+ .... ++. .+ ...-+-+|||.++
T Consensus 149 ~~~v~~~~p~NPtG~-~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 226 (364)
T PRK07865 149 PALIWLNSPSNPTGR-VLGVDHLRKVVAWARERGAVVASDECYLELGWDA-EPVSILDPRVCGGDHTGLLAVHSLSKQSN 226 (364)
T ss_pred ceEEEEcCCCCCCCc-cCCHHHHHHHHHHHHHcCCEEEEecchhhhccCC-CCCccccccccCCccceEEEEeechhccC
Confidence 667777666777774 5578889999999999999999999999886555 2221 111 01 1122337999997
Q ss_pred -CccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeec
Q 011777 325 -NGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRG 403 (477)
Q Consensus 325 -~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g 403 (477)
.|+|+||+++++++++.+.......+++.+.+.+.++.++|+. +++.++.++..+..++.+.+...+++.......
T Consensus 227 ~~GlRiG~i~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~ 303 (364)
T PRK07865 227 LAGYRAGFVAGDPALVAELLEVRKHAGMMVPAPVQAAMVAALGD---DAHVREQRERYARRRAVLRPALEAAGFRVDHSE 303 (364)
T ss_pred CCceeeEEEecCHHHHHHHHHHHHhcCCCcCHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCC
Confidence 6999999999999988887554445567788888888777753 333333444334444444444444442222222
Q ss_pred cceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCC----CCEEEEeCCCCCcHHHHHHHHHHHH
Q 011777 404 RGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLH----GNVFRIKPPMCFTKDDADFLVDALD 471 (477)
Q Consensus 404 ~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~----~~~iRi~p~~~~t~e~i~~~l~~l~ 471 (477)
.|+++|+.+.. ....+.+.|.++||.+.++..+ .+++||+.. .+++++++++++|.
T Consensus 304 ~~~~~~~~~~~----------~~~~~~~~l~~~gv~v~pg~~f~~~~~~~iRi~~~--~~~~~~~~~~~~l~ 363 (364)
T PRK07865 304 AGLYLWATRGE----------DCWDTVAWLAERGILVAPGDFYGPAGAQHVRVALT--ATDERIAAAVERLA 363 (364)
T ss_pred ccEEEEEeCCC----------CHHHHHHHHHHCCEEEeCccccCcCCCCEEEEEec--CCHHHHHHHHHHhh
Confidence 35566776521 1345678889999999886432 468999754 47899999999885
No 155
>PLN02656 tyrosine transaminase
Probab=99.93 E-value=2.5e-23 Score=212.03 Aligned_cols=353 Identities=18% Similarity=0.114 Sum_probs=215.4
Q ss_pred CCCEEEeecCCccccc-CCCCCHHHHHHHHHHHhhcc---ccccccCChHHHHHHHHHHhhCC--CCCCEEEEeCChHHH
Q 011777 94 NGRRYLDAFAGIVTVS-CGHCHPDVLNAIFEQSKLLQ---HATTIYLHHAIADFAEALASKMP--GNLKVVYFVNSGTEA 167 (477)
Q Consensus 94 dG~~ylD~~~g~~~~~-lGh~~p~v~~Av~~~l~~~~---~~~~~~~~~~~~~l~~~La~~~~--~~~~~v~~~~sGseA 167 (477)
.|+.+++|..|..... .-..++.+++++.+.+.... +....+..+.++.+++.+....+ .+.++|++|+|+++|
T Consensus 29 ~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~a 108 (409)
T PLN02656 29 NGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPYKLSLDDVFITSGCTQA 108 (409)
T ss_pred cCCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcccEEEeCChHHH
Confidence 5788999988776421 12457899999988876521 11122233445555555554432 345789999999999
Q ss_pred HHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhcc
Q 011777 168 NELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFG 247 (477)
Q Consensus 168 ~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~ 247 (477)
+..++.... .+++.|++.+++|..+....... |...+.++......+..| .++++++++
T Consensus 109 l~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~-------------g~~~~~i~~~~~~~~~~d----~~~l~~~~~-- 167 (409)
T PLN02656 109 IDVALSMLA--RPGANILLPRPGFPIYELCAAFR-------------HLEVRYVDLLPEKGWEVD----LDAVEALAD-- 167 (409)
T ss_pred HHHHHHHHh--CCCCeEEEeCCCCCcHHHHHHHc-------------CCEEEEEeCCCcCCCCCC----HHHHHHHhc--
Confidence 999988653 35678999999987553322211 122222211101111112 467777665
Q ss_pred CCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccc---cccCCCcceeeeccccc
Q 011777 248 TSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGF---ETQGVIPDIVTMAKGIG 324 (477)
Q Consensus 248 ~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~---~~~gv~pDivt~sK~lg 324 (477)
++..+++++.| +|++| ...+++.+++|.++|++||++||+||+|.+|.+.+..+..+ +......-+-+|||.++
T Consensus 168 -~~~~~v~l~~P-~NPtG-~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~ 244 (409)
T PLN02656 168 -QNTVALVIINP-GNPCG-NVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWI 244 (409)
T ss_pred -cCceEEEEECC-CCCCC-CCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcccCcEEEEcccchhcc
Confidence 23455666666 55566 45678889999999999999999999999886655211111 11111222347999977
Q ss_pred -CccceEEEEeC--------HHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhC
Q 011777 325 -NGLPLGAVVTT--------PEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERH 395 (477)
Q Consensus 325 -~G~pig~v~~~--------~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~ 395 (477)
.|+|+||++++ +++++.+..... ...+.+.+++.++.++|+... +++.++.++..+..++.+.+..+++
T Consensus 245 ~pGlRiG~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~q~a~~~~l~~~~-~~~~~~~~~~~~~~r~~~~~~L~~~ 322 (409)
T PLN02656 245 VPGWRLGWFVTTDPSGSFRDPKIVERIKKYFD-ILGGPATFIQAAVPTILEQTD-ESFFKKTINILKQSSDICCDRIKEI 322 (409)
T ss_pred CcceeEEEEEEeCcccccccHHHHHHHHHHHh-hhcCCCHHHHHHHHHHHhcCc-HHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 59999999984 577777654322 123567889999988886321 2333333333333333343333334
Q ss_pred CCce-eeecc-ceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCC--CCEEEEeCCCCCcHHHHHHHHHHHH
Q 011777 396 DIIG-DVRGR-GLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLH--GNVFRIKPPMCFTKDDADFLVDALD 471 (477)
Q Consensus 396 ~~~~-~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~--~~~iRi~p~~~~t~e~i~~~l~~l~ 471 (477)
+... ..++. |+++|+++...... ........+.+.|.++||.+.|+..+ .+++||+.. .+++++++++++|.
T Consensus 323 ~~~~~~~~p~gg~~~w~~l~~~~~~--~~~~~~~~~~~~l~~~gV~v~pg~~fg~~~~iRi~~~--~~~e~l~eal~rl~ 398 (409)
T PLN02656 323 PCITCPHKPEGSMAVMVKLNLSLLE--DISDDIDFCFKLAREESVIILPGTAVGLKNWLRITFA--ADPSSLEEALGRIK 398 (409)
T ss_pred CCCcCCcCCCeEEEEEEecchhhcC--CCCCHHHHHHHHHHhCCEEEecchhcCCCCeEEEEeC--CCHHHHHHHHHHHH
Confidence 3222 12333 57778877321000 00011234557778899999998544 468999765 58999999999999
Q ss_pred HHHhh
Q 011777 472 YSMSK 476 (477)
Q Consensus 472 ~~l~~ 476 (477)
+++.+
T Consensus 399 ~~~~~ 403 (409)
T PLN02656 399 SFYLR 403 (409)
T ss_pred HHHHH
Confidence 98753
No 156
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.93 E-value=8.4e-24 Score=221.50 Aligned_cols=350 Identities=15% Similarity=0.070 Sum_probs=212.6
Q ss_pred CCCCEEEeecCCcccccCCC-CCHHHHHHHHHHHhhccc-cccccCChHHHHHHHHHHhhC--CCCCCEEEEeCChHHHH
Q 011777 93 ENGRRYLDAFAGIVTVSCGH-CHPDVLNAIFEQSKLLQH-ATTIYLHHAIADFAEALASKM--PGNLKVVYFVNSGTEAN 168 (477)
Q Consensus 93 ~dG~~ylD~~~g~~~~~lGh-~~p~v~~Av~~~l~~~~~-~~~~~~~~~~~~l~~~La~~~--~~~~~~v~~~~sGseA~ 168 (477)
..|+.+|||..|.. .++|. .++++++++.+.+..... ....+..+.++.+++.+.+.. ..+.++|++++|++|++
T Consensus 143 ~~g~~~i~l~~G~p-~~~~~~~p~~~~~~~~~~~~~~~~Y~~~~G~~~lReaia~~~~~~~~~~~~~~~I~it~G~~eal 221 (517)
T PRK13355 143 AAGTHILKLNIGNP-APFGFRTPDEVVYDMAQQLTDTEGYSDSKGLFSARKAIMQYAQLKGLPNVDVDDIYTGNGVSELI 221 (517)
T ss_pred HcCCCeEEecCcCC-CcCCCCCCHHHHHHHHHHhhcCCCCCCCcChHHHHHHHHHHHHhcCCCCCChhHEEEeCcHHHHH
Confidence 46788999988765 34564 467899999887754321 111122333444444443332 34567899999999999
Q ss_pred HHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccC
Q 011777 169 ELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGT 248 (477)
Q Consensus 169 ~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~ 248 (477)
..+++... .+++.|++.+++|..+...+...+. ..+.++......|..| ++++++.+.
T Consensus 222 ~~~~~~l~--~~Gd~Vli~~P~y~~y~~~~~~~g~-------------~~v~~~~~~~~~~~~d----~~~l~~~~~--- 279 (517)
T PRK13355 222 NLSMSALL--DDGDEVLIPSPDYPLWTACVNLAGG-------------TAVHYRCDEQSEWYPD----IDDIRSKIT--- 279 (517)
T ss_pred HHHHHHhC--CCCCEEEEcCCCCcCHHHHHHHCCC-------------EEEEeecCcccCCCCC----HHHHHHhcC---
Confidence 99988653 3668899999999887654433322 2222211111112212 467777664
Q ss_pred CCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCcc--e---eeecccc
Q 011777 249 SGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPD--I---VTMAKGI 323 (477)
Q Consensus 249 ~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pD--i---vt~sK~l 323 (477)
++..+.++++| +|++| .+.+++.+++|.++|++||++||+||+|..|.+.|..+..+.. ..+| + -+|||.+
T Consensus 280 ~~~k~i~i~nP-~NPTG-~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~--~~~~~~vi~~~S~SK~~ 355 (517)
T PRK13355 280 SRTKAIVIINP-NNPTG-ALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIAS--LAPDLFCVTFSGLSKSH 355 (517)
T ss_pred cCceEEEEECC-CCCCC-cCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHH--hCCCCeEEEEecchhhc
Confidence 23334556666 55666 4568999999999999999999999999988665521222211 1233 2 3589999
Q ss_pred c-CccceEEEEeC--HHH----HHhhcccccccCCCCcHHHHHHHHHHHHhhch-hhHHHHHHHHHHHHHHHHHHHHHhC
Q 011777 324 G-NGLPLGAVVTT--PEI----ANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDK-ERRQAHCADVGSHLLGRLRTLQERH 395 (477)
Q Consensus 324 g-~G~pig~v~~~--~~~----~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~-~~~~~~~~~~~~~l~~~L~~l~~~~ 395 (477)
+ .|||+||++++ +++ ++.+... ....++.|.+++.++.++|+.... +++.+..++..+. ++.+.+...+.
T Consensus 356 ~~~G~RiG~~i~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~q~a~~~aL~~~~~~~~~~~~~~~~~~~-r~~l~~~L~~~ 433 (517)
T PRK13355 356 MIAGYRIGWMILSGNKRIAKDYIEGLNML-ANMRLCSNVPAQSIVQTALGGHQSVKDYLVPGGRVYEQ-RELVYNALNAI 433 (517)
T ss_pred cCcccceEEEEeeCchhhHHHHHHHHHHH-hcCcCCcChHHHHHHHHHhcCCccHHHHHHHHHHHHHH-HHHHHHHHhcC
Confidence 7 59999999954 443 3333211 223356778888888888853111 2232222222221 33343333344
Q ss_pred CCceeeeccceeE-EEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCC----CCEEEEeCCCCCcHHHHHHHHHHH
Q 011777 396 DIIGDVRGRGLMV-GMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLH----GNVFRIKPPMCFTKDDADFLVDAL 470 (477)
Q Consensus 396 ~~~~~v~g~g~~~-~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~----~~~iRi~p~~~~t~e~i~~~l~~l 470 (477)
+.+....+.|.|+ |+.+..... +.......+.+.|.++||++.|+..+ .+++||+. ..+++++++++++|
T Consensus 434 ~g~~~~~p~g~fy~~~~l~~~~~---~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~Ris~--~~~~~~l~~a~~rl 508 (517)
T PRK13355 434 PGISAVKPKAAFYIFPKIDVKKF---NIHDDEQFALDLLHDKKVLIVQGTGFNWDKPDHFRVVY--LPRLEDLEDAMDRL 508 (517)
T ss_pred CCcccCCCCeeeEEEeecCcccC---CCCCHHHHHHHHHHhCCEEEeCcchhCCCCcCEEEEEe--CCCHHHHHHHHHHH
Confidence 3344455666654 445532100 00012234556778899999998544 47899975 57899999999999
Q ss_pred HHHHhh
Q 011777 471 DYSMSK 476 (477)
Q Consensus 471 ~~~l~~ 476 (477)
.+++.+
T Consensus 509 ~~~~~~ 514 (517)
T PRK13355 509 ADFFSY 514 (517)
T ss_pred HHHHHH
Confidence 998864
No 157
>PRK07777 aminotransferase; Validated
Probab=99.93 E-value=1.1e-23 Score=213.35 Aligned_cols=340 Identities=15% Similarity=0.076 Sum_probs=211.3
Q ss_pred EEEeecCCcccccCCCCCHHHHHHHHHHHhhcc--ccccccCChHHHHHHHHHHhhCCCC--CC-EEEEeCChHHHHHHH
Q 011777 97 RYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQ--HATTIYLHHAIADFAEALASKMPGN--LK-VVYFVNSGTEANELA 171 (477)
Q Consensus 97 ~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~--~~~~~~~~~~~~~l~~~La~~~~~~--~~-~v~~~~sGseA~~~A 171 (477)
.++|+..|..... .++.+.+++.+.+.... +....+..+.+..+++.+.+.++.+ .+ +|++|+||++|+.++
T Consensus 25 ~~i~l~~g~p~~~---~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~ 101 (387)
T PRK07777 25 GAVNLGQGFPDED---GPPEMLEAAQEAIAGGVNQYPPGPGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAIAAA 101 (387)
T ss_pred CeEEccCCCCCCC---CCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHH
Confidence 5688888775432 24678888877665421 1111222334455555555544432 33 699999999999998
Q ss_pred HHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcC-CCCCCCHHHHHHHHHHHHhccCCC
Q 011777 172 MLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYH-GSFGSDAARYAQDLQDHIDFGTSG 250 (477)
Q Consensus 172 l~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~le~~i~~~~~~ 250 (477)
+... ..+++.|++..++|++........ +...+.++.... ..+..| ++++++.+. +
T Consensus 102 ~~~~--~~~gd~vli~~p~y~~~~~~~~~~-------------g~~~~~~~~~~~~~~~~~d----~~~l~~~~~----~ 158 (387)
T PRK07777 102 VLGL--VEPGDEVLLIEPYYDSYAAVIAMA-------------GAHRVPVPLVPDGRGFALD----LDALRAAVT----P 158 (387)
T ss_pred HHHh--cCCCCEEEEeCCCchhhHHHHHHC-------------CCEEEEeecCCccCCCcCC----HHHHHHhcC----c
Confidence 8744 235678999999998764332222 111111111100 011111 466776664 3
Q ss_pred CeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccc-cC---CCcceeeeccccc-C
Q 011777 251 KVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFET-QG---VIPDIVTMAKGIG-N 325 (477)
Q Consensus 251 ~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~-~g---v~pDivt~sK~lg-~ 325 (477)
++.+|++++.+|++|. .++.+.+++|.++|++|++++|+||+|.+|...+..+..+.. .+ ...-+.+|||.+| .
T Consensus 159 ~~~~v~l~~p~NPtG~-~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~ 237 (387)
T PRK07777 159 RTRALIVNSPHNPTGT-VLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVT 237 (387)
T ss_pred ccEEEEEcCCCCCCCc-cCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCc
Confidence 5667777776778885 457888999999999999999999999987654422222221 12 1222447999999 6
Q ss_pred ccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhch--hhHHHHHHHHHHHHHHHHHHHHHhCCCceeeec
Q 011777 326 GLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDK--ERRQAHCADVGSHLLGRLRTLQERHDIIGDVRG 403 (477)
Q Consensus 326 G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g 403 (477)
|+|+||+++++++++.+.......+++.+.+.+.++..+++..+. +.+.+.++++.+.+.+.|++ .+.......
T Consensus 238 GlRiG~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~ 313 (387)
T PRK07777 238 GWKIGWACGPAPLIAAVRAAKQYLTYVGGAPFQPAVAHALDHEDAWVAALRDSLQAKRDRLAAGLAE----AGFEVHDSA 313 (387)
T ss_pred CceeEEEecCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHh----CCCCccCCC
Confidence 999999999999988877655555666666667666666653211 22344555555555555544 232111222
Q ss_pred cceeEEEEEeeCCCCCCccHHHHHHHHHHHH-HcCceeeccCCC-------CCEEEEeCCCCCcHHHHHHHHHHHHHHHh
Q 011777 404 RGLMVGMELVTDRKEKTPAKAETAVLFEKLR-ELGVLVGKGGLH-------GNVFRIKPPMCFTKDDADFLVDALDYSMS 475 (477)
Q Consensus 404 ~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~-------~~~iRi~p~~~~t~e~i~~~l~~l~~~l~ 475 (477)
.|.++|+++..... ....++++.|+ ++||.+.|+..+ .+++||+.. .+++++++++++|.+++.
T Consensus 314 g~~~~~~~~~~~~~------~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~~--~~~~~l~~~l~~l~~~~~ 385 (387)
T PRK07777 314 GTYFLCADPRPLGY------DDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAFC--KRDDTLDEAIRRLRALRG 385 (387)
T ss_pred cceEEEecccccCC------CCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEec--CCHHHHHHHHHHHHHHhc
Confidence 35566766531100 02456788886 579999887432 358999754 579999999999998764
No 158
>PRK08363 alanine aminotransferase; Validated
Probab=99.93 E-value=1.8e-23 Score=212.70 Aligned_cols=348 Identities=13% Similarity=-0.010 Sum_probs=209.4
Q ss_pred CCCEEEeecCCcccc-cCCCCCHHHHHHHHHHHhhcc--ccccccCChHHHHHHHHHHhhCC--CCCCEEEEeCChHHHH
Q 011777 94 NGRRYLDAFAGIVTV-SCGHCHPDVLNAIFEQSKLLQ--HATTIYLHHAIADFAEALASKMP--GNLKVVYFVNSGTEAN 168 (477)
Q Consensus 94 dG~~ylD~~~g~~~~-~lGh~~p~v~~Av~~~l~~~~--~~~~~~~~~~~~~l~~~La~~~~--~~~~~v~~~~sGseA~ 168 (477)
+|..++|+..|.+.. .++ .++.+.+++.+.+.... +....+..+.++.+++.+....+ .+.++|++|+|+++|+
T Consensus 28 ~~~~~i~l~~g~p~~~~~~-p~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al 106 (398)
T PRK08363 28 KGIKVIRLNIGDPVKFDFQ-PPEHMKEAYCRAIKEGHNYYGPSEGLPELREAIVKREKRKNGVDITPDDVRVTAAVTEAL 106 (398)
T ss_pred cCCCeEEEeCCCCCcCCCC-CCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHH
Confidence 467899999988743 455 57899999988776431 11111222334444444443322 4557899999999999
Q ss_pred HHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccC
Q 011777 169 ELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGT 248 (477)
Q Consensus 169 ~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~ 248 (477)
..++.... .+++.|++.+++|.++...+...+ ...+.++......+..| .+++++.+.
T Consensus 107 ~~~~~~~~--~~gd~Vl~~~p~y~~~~~~~~~~g-------------~~~v~~~~~~~~~~~~d----~~~l~~~~~--- 164 (398)
T PRK08363 107 QLIFGALL--DPGDEILIPGPSYPPYTGLVKFYG-------------GVPVEYRTIEEEGWQPD----IDDIRKKIT--- 164 (398)
T ss_pred HHHHHHhC--CCCCEEEEcCCCCcchHHHHHHcC-------------CEEEEeccccccCCcCC----HHHHHhhCC---
Confidence 99988652 366889999999987755433222 11121110000111111 356666654
Q ss_pred CCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCcc---eeeeccccc-
Q 011777 249 SGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPD---IVTMAKGIG- 324 (477)
Q Consensus 249 ~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pD---ivt~sK~lg- 324 (477)
.+++++++...+|++| ...+.+.+++|.++|++||+++|+||+|..|...+ .........-... +-+|||.++
T Consensus 165 -~~~~~v~l~~p~NPtG-~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~-~~~~~~~~~~~~~vi~~~SfSK~~~~ 241 (398)
T PRK08363 165 -EKTKAIAVINPNNPTG-ALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEG-KHVSPGSLTKDVPVIVMNGLSKVYFA 241 (398)
T ss_pred -cceEEEEEECCCCCCC-cCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCC-cccCHHHcCcCCcEEEEecchhccCC
Confidence 2445555544466667 45578889999999999999999999998875544 2222211111112 337999976
Q ss_pred CccceEEEEe--CHHHHHhhcccc---cccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCce
Q 011777 325 NGLPLGAVVT--TPEIANVMAQKI---QFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIG 399 (477)
Q Consensus 325 ~G~pig~v~~--~~~~~~~~~~~~---~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~ 399 (477)
.|+|+||+++ ++++++.+.... ...+++.+.+++.++.++|+. .+++.++.++..+..++.+.+...+++.+.
T Consensus 242 ~GlRiG~~~~~~~~~~~~~l~~~~~~~~~~~~~~s~~~q~~~~~~l~~--~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~ 319 (398)
T PRK08363 242 TGWRLGYIYFVDPEGKLAEVREAIDKLARIRLCPNTPAQFAAIAGLTG--PMDYLEEYMKKLKERRDYIYKRLNEIPGIS 319 (398)
T ss_pred ccceEEEEEEeCcHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHhC--ChHHHHHHHHHHHHHHHHHHHHHhcCCCCE
Confidence 6999999997 666655543221 113467788888888888853 233333333333333333333333343333
Q ss_pred eeeccce-eEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCC----CCEEEEeCCCCCcHHHHHHHHHHHHHHH
Q 011777 400 DVRGRGL-MVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLH----GNVFRIKPPMCFTKDDADFLVDALDYSM 474 (477)
Q Consensus 400 ~v~g~g~-~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~----~~~iRi~p~~~~t~e~i~~~l~~l~~~l 474 (477)
..++.|. ++|+.+..... . .....+.+.|.++||.+.++..+ .+++||+. ..+++++++++++|.+++
T Consensus 320 ~~~p~g~~~~~~~l~~~~~---~--~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~--~~~~~~l~~~l~~l~~~~ 392 (398)
T PRK08363 320 TTKPQGAFYIFPRIEEGPW---K--DDKEFVLDVLHEAHVLFVHGSGFGEYGAGHFRLVF--LPPVEILEEAMDRFEEFM 392 (398)
T ss_pred ecCCCeEEEEEEEeccCCC---C--CHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEe--cCCHHHHHHHHHHHHHHH
Confidence 3344454 44555532100 0 11233456678899999987543 36899975 467899999999999887
Q ss_pred hh
Q 011777 475 SK 476 (477)
Q Consensus 475 ~~ 476 (477)
++
T Consensus 393 ~~ 394 (398)
T PRK08363 393 RE 394 (398)
T ss_pred HH
Confidence 64
No 159
>PRK07550 hypothetical protein; Provisional
Probab=99.93 E-value=1.3e-23 Score=212.94 Aligned_cols=341 Identities=15% Similarity=0.081 Sum_probs=212.5
Q ss_pred CCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhcc---ccccccCChHHHHHHHHHHhhCC--CCCCEEEEeCChHHHH
Q 011777 94 NGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQ---HATTIYLHHAIADFAEALASKMP--GNLKVVYFVNSGTEAN 168 (477)
Q Consensus 94 dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~---~~~~~~~~~~~~~l~~~La~~~~--~~~~~v~~~~sGseA~ 168 (477)
.|..++||..+... +. .++.+.+++.+.+.... +....+..+.+..+++.+.+..+ .+.++|++|+|+++|+
T Consensus 27 ~~~~~i~l~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al 103 (386)
T PRK07550 27 ADGPLIDLSQAVPG--YP-PPPELLRALAEAAADPAAHLYGPVEGLPELREAYAAHYSRLYGAAISPEQVHITSGCNQAF 103 (386)
T ss_pred cCCCeEEeCCCCCC--CC-CCHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHH
Confidence 35567898887753 22 36788888887664211 11112334455666666665533 3457899999999999
Q ss_pred HHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccC
Q 011777 169 ELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGT 248 (477)
Q Consensus 169 ~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~ 248 (477)
..++++.. .+++.|++.+++|.+....... .|...++++......+..| .++++++++
T Consensus 104 ~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~-------------~g~~~~~v~~~~~~~~~~~----~~~l~~~~~--- 161 (386)
T PRK07550 104 WAAMVTLA--GAGDEVILPLPWYFNHKMWLDM-------------LGIRPVYLPCDEGPGLLPD----PAAAEALIT--- 161 (386)
T ss_pred HHHHHHhc--CCCCEEEEcCCCCcchHHHHHh-------------cCCEEEEEecCCCcCCCCC----HHHHHHHhc---
Confidence 99888653 3567899999999766432221 1333333322111111111 467887776
Q ss_pred CCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCcc-cccc---CCCcceeeeccccc
Q 011777 249 SGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWG-FETQ---GVIPDIVTMAKGIG 324 (477)
Q Consensus 249 ~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~-~~~~---gv~pDivt~sK~lg 324 (477)
.+..+.+++.| +|++|. .++.+.+++|.++|++||+++|+||+|.+|...+..... +... .....+.+|||.++
T Consensus 162 ~~~~~v~~~~P-~NPtG~-~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g 239 (386)
T PRK07550 162 PRTRAIALVTP-NNPTGV-VYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYA 239 (386)
T ss_pred ccCcEEEEeCC-CCCCCc-ccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhcc
Confidence 22334455555 456664 557889999999999999999999999987433211111 1111 11233457999999
Q ss_pred -CccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhch--hhHHHHHHHHHHHHHHHHHHHHHhCCCceee
Q 011777 325 -NGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDK--ERRQAHCADVGSHLLGRLRTLQERHDIIGDV 401 (477)
Q Consensus 325 -~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v 401 (477)
.|+|+||+++++++++.+.......+.+.+.+++.++..+++.+++ ++..+.++++.+.+.+.|.+ ++.+...
T Consensus 240 ~~G~RiG~i~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~ 315 (386)
T PRK07550 240 LTGHRVGAVVASPARIAEIEKFMDTVAICAPRIGQIAVAWGLPNLADWRAGNRAEIARRRDAFRAVFAR----LPGWELL 315 (386)
T ss_pred CcccceEeeecCHHHHHHHHHHHhhcccCCCcHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHh----CCCceeC
Confidence 7999999999999988877655555666788888888887764321 12233344444444444433 3222222
Q ss_pred eccceeEEEEEeeCCCCCCccHHHHHHHHHHHH-HcCceeeccCCC----CCEEEEeCCCCCcHHHHHHHHHHHHHH
Q 011777 402 RGRGLMVGMELVTDRKEKTPAKAETAVLFEKLR-ELGVLVGKGGLH----GNVFRIKPPMCFTKDDADFLVDALDYS 473 (477)
Q Consensus 402 ~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~----~~~iRi~p~~~~t~e~i~~~l~~l~~~ 473 (477)
...|.++|+.+... .....++++.|+ ++||.+.|+..+ .+++||++.. .+++++++++++|.++
T Consensus 316 ~~g~~~~~~~~~~~-------~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~-~~~~~~~~~~~~l~~~ 384 (386)
T PRK07550 316 ASGAYFAYVRHPFP-------DRPSREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFAN-ADVAGIGELVERLRAF 384 (386)
T ss_pred CCceEEEEecCCCC-------CCCHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEeec-CCHHHHHHHHHHHHhh
Confidence 23356667766320 112456777764 679999987432 4689998753 4789999999999864
No 160
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=8.8e-24 Score=213.19 Aligned_cols=325 Identities=15% Similarity=0.123 Sum_probs=207.3
Q ss_pred CCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHH
Q 011777 94 NGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAML 173 (477)
Q Consensus 94 dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~ 173 (477)
.+...||+..|.. ++| .+|.+.+++.+. .. ...|+.+...+|++.++++++.+.++|++++|+++++..+++
T Consensus 50 ~~~~~i~l~~n~~--p~~-~~~~v~~a~~~~-~~----~~~Yp~~~~~~lr~~ia~~~~~~~~~I~~t~Ga~~~i~~~~~ 121 (380)
T PLN03026 50 KPEDIVKLDANEN--PYG-PPPEVLEALGNM-KF----PYVYPDPESRRLRAALAEDSGLESENILVGCGADELIDLLMR 121 (380)
T ss_pred CccceEEccCCCC--CCC-CCHHHHHHHHhh-Hh----hccCCCCCHHHHHHHHHHHhCcChhhEEEcCCHHHHHHHHHH
Confidence 4668899887653 455 578888887642 11 123455556789999999988777899999999999999887
Q ss_pred HHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCee
Q 011777 174 MARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVA 253 (477)
Q Consensus 174 ~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a 253 (477)
... .+++.|++.+++|..+....... |...+.+|... .+..| .+++++.+. ..+++
T Consensus 122 ~~~--~~gd~Vlv~~P~y~~y~~~~~~~-------------g~~~~~v~~~~--~~~~d----~~~l~~~~~---~~~~~ 177 (380)
T PLN03026 122 CVL--DPGDKIIDCPPTFGMYVFDAAVN-------------GAEVIKVPRTP--DFSLD----VPRIVEAVE---THKPK 177 (380)
T ss_pred Hhc--CCCCEEEEcCCChHHHHHHHHHc-------------CCEEEEeecCC--CCCcC----HHHHHHHHh---ccCCc
Confidence 553 35678999999987543322211 22222222211 12111 467777663 13456
Q ss_pred EEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCcc-ccccCCCcceeeeccccc-CccceEE
Q 011777 254 GFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWG-FETQGVIPDIVTMAKGIG-NGLPLGA 331 (477)
Q Consensus 254 ~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~-~~~~gv~pDivt~sK~lg-~G~pig~ 331 (477)
+|++...+|++|.+.+ .+++.++++.. +++|+||+|..|...+ .... .+..+...-+-+|||.+| .|+|+||
T Consensus 178 ~v~l~~P~NPTG~~~~----~~~l~~l~~~~-~~vi~DeaY~~~~~~~-~~~~~~~~~~~viv~~SfSK~~glaGlRiGy 251 (380)
T PLN03026 178 LLFLTSPNNPDGSIIS----DDDLLKILELP-ILVVLDEAYIEFSTQE-SRMKWVKKYDNLIVLRTFSKRAGLAGLRVGY 251 (380)
T ss_pred EEEEeCCCCCCCCCCC----HHHHHHHHhcC-CEEEEECcchhhcCCc-chHHHHHhCCCEEEEecchHhhcCcccccee
Confidence 6666666777786654 45555566543 8999999999885433 2211 111122122337999999 7999999
Q ss_pred EEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhch-hhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEE
Q 011777 332 VVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDK-ERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGM 410 (477)
Q Consensus 332 v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i 410 (477)
+++++++++.+.... ..++.+.+++.++.++|+..+. ++..+.+++.++++.+.|+ +++.+...+..|.|+++
T Consensus 252 ~~~~~~~i~~l~~~~--~~~~~~~~~q~aa~~aL~~~~~~~~~~~~~~~~r~~l~~~L~----~~~~~~~~p~~~~f~~~ 325 (380)
T PLN03026 252 GAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALSNPKYLEDVKNALVEERERLFGLLK----EVPFLEPYPSDANFILC 325 (380)
T ss_pred eecCHHHHHHHHHhc--CCCCCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHH----HCCCCeECCCCCeEEEE
Confidence 999999998876543 3467788889888888853110 2233334444444444444 33433223456778888
Q ss_pred EEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCC--CCCEEEEeCCCCCcHHHHHHHHHHHHHH
Q 011777 411 ELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGL--HGNVFRIKPPMCFTKDDADFLVDALDYS 473 (477)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~--~~~~iRi~p~~~~t~e~i~~~l~~l~~~ 473 (477)
.+... ....++.+.|+++||.+.++.. ..+++||+.. ++++++++++.|+++
T Consensus 326 ~~~~~--------~~~~~~~~~l~~~gI~v~~~~~~~~~~~lRis~~---~~~~~~~l~~al~~~ 379 (380)
T PLN03026 326 RVTSG--------RDAKKLKEDLAKMGVMVRHYNSKELKGYIRVSVG---KPEHTDALMEALKQL 379 (380)
T ss_pred ECCCC--------CCHHHHHHHHHHCCeEEEECCCCCCCCEEEEecC---CHHHHHHHHHHHHHh
Confidence 76321 1245688888899999987632 2468999644 678899999988764
No 161
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.93 E-value=7e-24 Score=212.42 Aligned_cols=323 Identities=16% Similarity=0.100 Sum_probs=207.5
Q ss_pred CCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCC---CCCCEEEEeCChHHHHHH
Q 011777 94 NGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMP---GNLKVVYFVNSGTEANEL 170 (477)
Q Consensus 94 dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~---~~~~~v~~~~sGseA~~~ 170 (477)
++..++|+.+|... ...+|.+.+++.+......+....+..+.+.++++.+.+..+ .+.++|++|+|+++++..
T Consensus 19 ~~~~~i~l~~~~p~---~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~I~it~G~~~~i~~ 95 (357)
T TIGR03539 19 HPDGIVDLSVGTPV---DPVPPLIRAALAAAADAPGYPQTWGTPELREAIVDWLERRRGVPGLDPTAVLPVIGTKELVAW 95 (357)
T ss_pred CCCCeEEccCCCCC---CCCCHHHHHHHHHHHhhCCCCcccCCHHHHHHHHHHHHHhcCCCCCCcCeEEEccChHHHHHH
Confidence 34567888887643 234788899887765433333333344566777777766543 456899999999999998
Q ss_pred HHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCC
Q 011777 171 AMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSG 250 (477)
Q Consensus 171 Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~ 250 (477)
++.+.. ..+++.|++.+++|.++....... |...+.+++ .+.+ . ..
T Consensus 96 ~~~~l~-~~~gd~Vl~~~p~y~~~~~~~~~~-------------g~~~~~v~~-------------~~~l----~---~~ 141 (357)
T TIGR03539 96 LPTLLG-LGPGDTVVIPELAYPTYEVGALLA-------------GATPVAADD-------------PTEL----D---PV 141 (357)
T ss_pred HHHHHc-CCCCCEEEECCCCcHHHHHHHHhc-------------CCEEeccCC-------------hhhc----C---cc
Confidence 776542 235678999999998775443222 222222211 1222 1 13
Q ss_pred CeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCcc-ccc--cC----CCcceeeecccc
Q 011777 251 KVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWG-FET--QG----VIPDIVTMAKGI 323 (477)
Q Consensus 251 ~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~-~~~--~g----v~pDivt~sK~l 323 (477)
++++|+++..+|++| ...+.+.+++|.++|++||+++|+||+|.+|.+.+ .... ++. .+ ...-+-+|||.+
T Consensus 142 ~~~~v~~~~p~NPtG-~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~~~~~~~~vi~~~S~SK~~ 219 (357)
T TIGR03539 142 GPDLIWLNSPGNPTG-RVLSVDELRAIVAWARERGAVVASDECYLELGWEG-RPVSILDPRVCGGDHTGLLAVHSLSKRS 219 (357)
T ss_pred CccEEEEeCCCCCcC-ccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCC-CCccceecccCCCccccEEEEecccccc
Confidence 567777766667777 45678889999999999999999999999887654 2221 111 01 111223799999
Q ss_pred c-CccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeee
Q 011777 324 G-NGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVR 402 (477)
Q Consensus 324 g-~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~ 402 (477)
+ .|+|+||+++++++++.+........++.+.+++.++.++|+. ++..++.++..+..++.+.+...+++......
T Consensus 220 ~~~G~R~G~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~L~~~g~~~~~p 296 (357)
T TIGR03539 220 NLAGYRAGFVAGDPALVAELLTVRKHAGLMVPAPVQAAMVAALGD---DGHVAEQKARYAARRAQLKPALEKAGFRIDHS 296 (357)
T ss_pred CCCceeEEEEecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHcCC---HHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCC
Confidence 6 6999999999999988876554445677888888888887752 23333333333333333433333334221222
Q ss_pred ccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCC----CCEEEEeCCCCCcHHHHHHHHHHH
Q 011777 403 GRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLH----GNVFRIKPPMCFTKDDADFLVDAL 470 (477)
Q Consensus 403 g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~----~~~iRi~p~~~~t~e~i~~~l~~l 470 (477)
..|.++|+.+.. ...++.+.|.++||.+.|+..+ .+++||+.. .+++++++++++|
T Consensus 297 ~~~~~~~~~~~~----------~~~~~~~~l~~~gV~v~pg~~f~~~~~~~iRis~~--~~~~~i~~~~~~l 356 (357)
T TIGR03539 297 EAGLYLWATRGE----------DAWDTVDRLAELGILVAPGDFYGPAGSQHVRVALT--ATDERIAAAVARL 356 (357)
T ss_pred CccEEEEEECCC----------CHHHHHHHHHhCCEEECCccccCCCCCCeEEEEec--CCHHHHHHHHHhh
Confidence 235566665411 1346778889999999987432 478999765 4789999999876
No 162
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.93 E-value=2.6e-23 Score=210.78 Aligned_cols=344 Identities=13% Similarity=0.047 Sum_probs=216.1
Q ss_pred CEEEeecCCcccccCCCCCHHHHHHHHHHHhhcc--ccccccCChHHHHHHHHHHhhCCC--C-CCEEEEeCChHHHHHH
Q 011777 96 RRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQ--HATTIYLHHAIADFAEALASKMPG--N-LKVVYFVNSGTEANEL 170 (477)
Q Consensus 96 ~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~--~~~~~~~~~~~~~l~~~La~~~~~--~-~~~v~~~~sGseA~~~ 170 (477)
..+|||..|... ++. ++.+.+++.+.+.... +....+..+.++.+++.+....+. . .++|++|+|+++|+..
T Consensus 30 ~~~i~l~~~~~~--~~~-~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al~~ 106 (391)
T PRK07309 30 PGILKLTLGEPD--FTT-PDHVKEAAKRAIDANQSHYTGMAGLLELRQAAADFVKEKYNLDYAPENEILVTIGATEALSA 106 (391)
T ss_pred CCeEEcCCCCCC--CCC-CHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHH
Confidence 458998887753 453 6788898888775421 111112234445555555443332 2 3589999999999999
Q ss_pred HHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCC
Q 011777 171 AMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSG 250 (477)
Q Consensus 171 Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~ 250 (477)
+++... .+++.|++.+++|.++....... |...+.++... ..+..| .++++++++.. .+
T Consensus 107 ~~~~~~--~~gd~vl~~~p~y~~~~~~~~~~-------------g~~~~~~~~~~-~~~~~d----~~~l~~~~~~~-~~ 165 (391)
T PRK07309 107 SLTAIL--EPGDKVLLPAPAYPGYEPIVNLV-------------GAEIVEIDTTE-NDFVLT----PEMLEKAILEQ-GD 165 (391)
T ss_pred HHHHhc--CCCCEEEEeCCCCcchHHHHHHc-------------CCEEEEEecCC-cCCcCC----HHHHHHHhhcc-CC
Confidence 988653 36678999999998875433222 12222222111 111112 47787777532 23
Q ss_pred CeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCcccccc--CCCcceeeeccccc-Ccc
Q 011777 251 KVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQ--GVIPDIVTMAKGIG-NGL 327 (477)
Q Consensus 251 ~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~--gv~pDivt~sK~lg-~G~ 327 (477)
+++++++...+|++| ...+.+.+++|.++|++||+++|+||+|..|...|.....+... +...-+-+|||.+| .|+
T Consensus 166 ~~~~i~l~~P~NPtG-~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~Gl 244 (391)
T PRK07309 166 KLKAVILNYPANPTG-VTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYLPDQTILINGLSKSHAMTGW 244 (391)
T ss_pred CeEEEEEECCCCCCC-cCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhccCCEEEEecChhhccCccc
Confidence 566676664466667 55678889999999999999999999999886544222222111 11122337999998 799
Q ss_pred ceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhch--hhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccc
Q 011777 328 PLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDK--ERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRG 405 (477)
Q Consensus 328 pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g 405 (477)
|+||+++++++++.+.......+.+.+++++.++.+.|+.... ..+.++++++.+++.+.|++ ++........|
T Consensus 245 RvG~~v~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~p~gg 320 (391)
T PRK07309 245 RIGLIFAPAEFTAQLIKSHQYLVTAATTMAQFAAVEALTNGKDDALPMKKEYIKRRDYIIEKMTD----LGFKIIKPDGA 320 (391)
T ss_pred eeEEEEeCHHHHHHHHHHHhhcccCCChHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHH----CCCeecCCCee
Confidence 9999999999998887543334456788888888888864221 22334455555555555443 33222222335
Q ss_pred eeEEEEEeeCCCCCCccHHHHHHHHHH-HHHcCceeeccCCC----CCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 406 LMVGMELVTDRKEKTPAKAETAVLFEK-LRELGVLVGKGGLH----GNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 406 ~~~~i~~~~~~~~~~~~~~~~~~~~~~-l~~~Gv~v~~~~~~----~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
.++|+.+.... .....++.+. +.++||.+.|+..+ +++|||+.+ .+++++++++++|.+++++
T Consensus 321 ~~~~~~l~~~~------~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~--~~~~~l~~~i~~l~~~~~~ 388 (391)
T PRK07309 321 FYIFAKIPAGY------NQDSFKFLQDFARKKAVAFIPGAAFGPYGEGYVRLSYA--ASMETIKEAMKRLKEYMEE 388 (391)
T ss_pred EEEEEECCCCC------CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec--CCHHHHHHHHHHHHHHHHh
Confidence 56676652210 0113456654 55789999987533 469999765 4789999999999998865
No 163
>PRK07683 aminotransferase A; Validated
Probab=99.93 E-value=2.9e-23 Score=210.17 Aligned_cols=338 Identities=12% Similarity=0.060 Sum_probs=209.9
Q ss_pred CEEEeecCCcccccCCCCCHHHHHHHHHHHhhcc--ccccccCChHHHHHHHHHHhhCC--CCCC-EEEEeCChHHHHHH
Q 011777 96 RRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQ--HATTIYLHHAIADFAEALASKMP--GNLK-VVYFVNSGTEANEL 170 (477)
Q Consensus 96 ~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~--~~~~~~~~~~~~~l~~~La~~~~--~~~~-~v~~~~sGseA~~~ 170 (477)
..++|+..|.+. ++ .++.+.+++.+.++... +....+..+.+.++++.+.+..+ .+.+ +|++|+|+++|+..
T Consensus 28 ~~~i~l~~~~p~--~~-~~~~~~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~~al~~ 104 (387)
T PRK07683 28 DNLISLTIGQPD--FP-TPSHVKEAAKRAITENYTSYTHNAGLLELRKAACNFVKDKYDLHYSPESEIIVTIGASEAIDI 104 (387)
T ss_pred CCeEEecCCCCC--CC-CCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHH
Confidence 457888877643 33 36789999998876421 11122334455566666654433 3455 89999999999999
Q ss_pred HHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCC
Q 011777 171 AMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSG 250 (477)
Q Consensus 171 Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~ 250 (477)
+++... ..++.|++..++|.++.......+ ...+.++... ..+..| .+++++.+. .
T Consensus 105 ~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~g-------------~~~~~~~~~~-~~~~~~----~~~l~~~~~----~ 160 (387)
T PRK07683 105 AFRTIL--EPGTEVILPAPIYPGYEPIIRLCG-------------AKPVFIDTRS-TGFRLT----AEALENAIT----E 160 (387)
T ss_pred HHHHhC--CCCCEEEEcCCCccchHHHHHHcC-------------CEEEEeecCc-ccCCCC----HHHHHHhcC----c
Confidence 987653 356789999999987655443322 2222221110 112111 366777664 2
Q ss_pred CeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccc-cccCC---Ccceeeeccccc-C
Q 011777 251 KVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGF-ETQGV---IPDIVTMAKGIG-N 325 (477)
Q Consensus 251 ~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~-~~~gv---~pDivt~sK~lg-~ 325 (477)
+++++++...++++| ..++++.+++|.++|+++|+++|+||+|..|.+.+ ....+ ...+. ..-+.+|||.++ .
T Consensus 161 ~~~~i~i~~p~NPtG-~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~~~~~vi~~~s~SK~~~~p 238 (387)
T PRK07683 161 KTRCVVLPYPSNPTG-VTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQ-PHTSIAHFPEMREKTIVINGLSKSHSMT 238 (387)
T ss_pred CceEEEEeCCCCCCC-cCCCHHHHHHHHHHHHHcCeEEEEecccccceeCC-CcCChhhccCCcCCeEEEeeccccccCc
Confidence 345555555566677 45688889999999999999999999999875433 22222 11122 222347999999 7
Q ss_pred ccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhch--hhHHHHHHHHHHHHHHHHHHHHHhCCCceeeec
Q 011777 326 GLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDK--ERRQAHCADVGSHLLGRLRTLQERHDIIGDVRG 403 (477)
Q Consensus 326 G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g 403 (477)
|+|+||+++++++++.+.........+.+.+++.++.+.|+.... +...++++++.+.+.+.|.+ .+. ....+
T Consensus 239 GlRiG~i~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~-~~~~~ 313 (387)
T PRK07683 239 GWRIGFLFAPSYLAKHILKVHQYNVTCASSISQYAALEALTAGKDDAKMMRHQYKKRRDYVYNRLIS----MGL-DVEKP 313 (387)
T ss_pred cceeEEEEcCHHHHHHHHHHHHhccCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHH----cCC-cccCC
Confidence 999999999999988876543333344567888888877753221 12233334444444444433 332 22233
Q ss_pred c-ceeEEEEEeeCCCCCCccHHHHHHHHH-HHHHcCceeeccCCC----CCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 404 R-GLMVGMELVTDRKEKTPAKAETAVLFE-KLRELGVLVGKGGLH----GNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 404 ~-g~~~~i~~~~~~~~~~~~~~~~~~~~~-~l~~~Gv~v~~~~~~----~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
. |.++|+.+.... ....++.. .+.++||.+.++..+ .+++||+.. .+++++.+++++|.+++.+
T Consensus 314 ~~~~~~~~~~~~~~-------~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~~~--~~~~~~~~al~~l~~~l~~ 383 (387)
T PRK07683 314 TGAFYLFPSIGHFT-------MSSFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLSYA--YSIETLKEGLDRLEAFLQQ 383 (387)
T ss_pred CeeEEEEEecccCC-------CCHHHHHHHHHHhCCEEEcCchhhCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHh
Confidence 3 455565553210 11234544 457789999987432 478999654 5899999999999998753
No 164
>PRK08175 aminotransferase; Validated
Probab=99.93 E-value=2.1e-23 Score=211.80 Aligned_cols=346 Identities=12% Similarity=0.077 Sum_probs=216.1
Q ss_pred CCEEEeecCCcccccCCCCCHHHHHHHHHHHhhc---cccccccCChHHHHHHHHHHhhC--CCCCC-EEEEeCChHHHH
Q 011777 95 GRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLL---QHATTIYLHHAIADFAEALASKM--PGNLK-VVYFVNSGTEAN 168 (477)
Q Consensus 95 G~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~---~~~~~~~~~~~~~~l~~~La~~~--~~~~~-~v~~~~sGseA~ 168 (477)
|+.++||..|.. .+..++.+.+++.+.+... .+....+..+.+..+++.+.+.. +.+.+ ++++|+|+++++
T Consensus 28 ~~~~i~l~~g~p---~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~l 104 (395)
T PRK08175 28 GEDIIDFSMGNP---DGPTPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEGL 104 (395)
T ss_pred CCCeEEcCCCCC---CCCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHH
Confidence 456788877653 3345677888887766432 12212223345556666665543 23344 799999999999
Q ss_pred HHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccC
Q 011777 169 ELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGT 248 (477)
Q Consensus 169 ~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~ 248 (477)
..++.... .+++.|++.+++|.......... |...+.++...... ..++++++++..
T Consensus 105 ~~~~~~~~--~~gd~Vlv~~P~y~~~~~~~~~~-------------g~~~~~v~~~~~~~-------~~~~l~~~l~~~- 161 (395)
T PRK08175 105 AHLMLATL--DHGDTVLVPNPSYPIHIYGAVIA-------------GAQVRSVPLVEGVD-------FFNELERAIRES- 161 (395)
T ss_pred HHHHHHhC--CCCCEEEEcCCCCcchHHHHHHc-------------CCeEEEEecccCCC-------cHHHHHHHHhhc-
Confidence 98776553 35678999999997764443222 22222222211111 146777777632
Q ss_pred CCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccc-cc---cCCCcceeeeccccc
Q 011777 249 SGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGF-ET---QGVIPDIVTMAKGIG 324 (477)
Q Consensus 249 ~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~-~~---~gv~pDivt~sK~lg 324 (477)
..+++++++...++++| ...+.+.+++|.++|++||+++|+||+|..+...+.....+ .. .+...-+.+|||.+|
T Consensus 162 ~~~~~~v~i~~p~NPtG-~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g 240 (395)
T PRK08175 162 YPKPKMMILGFPSNPTA-QCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYN 240 (395)
T ss_pred cCCceEEEEeCCCCCCC-CCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeecccccc
Confidence 23566777665466677 56688889999999999999999999998875544111111 11 122223447999997
Q ss_pred -CccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeec
Q 011777 325 -NGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRG 403 (477)
Q Consensus 325 -~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g 403 (477)
.|+|+||+++++++++.+........++.+.+.+.++.++++. .+.+.+++++..+..++.+.+..++++.......
T Consensus 241 ~pGlRiG~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~p~ 318 (395)
T PRK08175 241 MAGWRIGFMVGNPELVSALARIKSYHDYGTFTPLQVAAIAALEG--DQQCVRDIAEQYKRRRDVLVKGLHEAGWMVEMPK 318 (395)
T ss_pred CcchhheeeeCCHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCC
Confidence 6999999999999999887654444566677788888777753 2333334443333333333333333443222233
Q ss_pred cceeEEEEEeeCCCCCCccHHHHHHHHHHHH-HcCceeeccCCC----CCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 404 RGLMVGMELVTDRKEKTPAKAETAVLFEKLR-ELGVLVGKGGLH----GNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 404 ~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~----~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
.|+++|+++..... .....++++.++ ++||.+.++..+ .+++||+. ..+++.+.+++++|.+++.+
T Consensus 319 ~g~~i~i~l~~~~~-----~~~~~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis~--~~~~~~~~~al~~l~~~l~~ 389 (395)
T PRK08175 319 ASMYVWAKIPEPYA-----AMGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFAL--IENRDRIRQAIRGIKAMFRA 389 (395)
T ss_pred EEEEEEEECCcccC-----CCCHHHHHHHHHHhCCEEEeCchhhCcCCCCeEEEEe--CCCHHHHHHHHHHHHHHHHh
Confidence 57888988743210 001356766655 689999987432 36899975 46899999999999998864
No 165
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.93 E-value=2.6e-23 Score=211.03 Aligned_cols=335 Identities=14% Similarity=0.039 Sum_probs=209.6
Q ss_pred eCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhcc-ccccccCChHHHHHHHHHHhhCC----CCC-CEEEEeCChH
Q 011777 92 DENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQ-HATTIYLHHAIADFAEALASKMP----GNL-KVVYFVNSGT 165 (477)
Q Consensus 92 d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~-~~~~~~~~~~~~~l~~~La~~~~----~~~-~~v~~~~sGs 165 (477)
+..|+.++||..|.. .++ .++.+++++.+.+.... +....+..+.+..+++.+.+..+ .+. ++|++|+|++
T Consensus 24 ~~~~~~~i~l~~~~p--~~~-~~~~~~~a~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga~ 100 (393)
T TIGR03538 24 PPASKPPIALSIGEP--KHP-TPAFVLEALRENLHGLSTYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGTR 100 (393)
T ss_pred hhcCCCeEEecCCCC--CCC-CCHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCCcH
Confidence 346778889887765 344 47889999988765422 22222334556666666665533 244 3799999999
Q ss_pred HHHHHHHHHHHhccCCc--eEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHH
Q 011777 166 EANELAMLMARLSTGNL--GMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDH 243 (477)
Q Consensus 166 eA~~~Al~~ar~~~~~~--~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~ 243 (477)
+|+..++++... +++ .|++.+++|.++....... |...+.+|......+..| .+++++.
T Consensus 101 ~al~~~~~~l~~--~gd~~~vlv~~P~y~~~~~~~~~~-------------g~~~~~v~~~~~~~~~~d----~~~l~~~ 161 (393)
T TIGR03538 101 EALFAFAQAVIN--PGQAPLVVMPNPFYQIYEGAALLA-------------GAEPYFLNCTAENGFLPD----FDAVPES 161 (393)
T ss_pred HHHHHHHHHHcC--CCCcceEEecCCCCcchHHHHHhc-------------CCeEEEeeccccCCCCCC----HHHHHHH
Confidence 999999886543 333 4888889998765433222 222222222111112212 3667666
Q ss_pred HhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCC-CCcc----ccccC-----CC
Q 011777 244 IDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGS-HYWG----FETQG-----VI 313 (477)
Q Consensus 244 i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~-~~~~----~~~~g-----v~ 313 (477)
+. +++++|++...+|++| .+.+.+.+++|.++|++|+++||+||+|..|.+.+. .... ....+ ..
T Consensus 162 ~~----~~~k~i~l~~p~NPtG-~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 236 (393)
T TIGR03538 162 VW----RRCQLLFVCSPGNPTG-AVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRC 236 (393)
T ss_pred Hh----hcceEEEEeCCCCCcC-cccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccE
Confidence 54 2455555544566677 456889999999999999999999999998754321 1111 11111 11
Q ss_pred cceeeeccccc-CccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHH----HHHHHHHHHHHH
Q 011777 314 PDIVTMAKGIG-NGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAH----CADVGSHLLGRL 388 (477)
Q Consensus 314 pDivt~sK~lg-~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~----~~~~~~~l~~~L 388 (477)
.-+-+|||.++ .|+|+||+++++++++.+.......+++.+++.+.++.+++. .+++.++ +++..+.+.+.|
T Consensus 237 i~i~S~SK~~~~~GlRvG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~L 313 (393)
T TIGR03538 237 LVFHSLSKRSNLPGLRSGFVAGDAEILKAFLRYRTYHGCAMPIPTQLASIAAWN---DEQHVRENRALYREKFAAVLEIL 313 (393)
T ss_pred EEEecchhhcCCcccceEEEecCHHHHHHHHHHHHhhccCcCHHHHHHHHHHhc---ChHHHHHHHHHHHHHHHHHHHHH
Confidence 22337999987 599999999999998887654433456678888888877764 2333333 333333444444
Q ss_pred HHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHH-HcCceeeccCCC----------CCEEEEeCCCC
Q 011777 389 RTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLR-ELGVLVGKGGLH----------GNVFRIKPPMC 457 (477)
Q Consensus 389 ~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~----------~~~iRi~p~~~ 457 (477)
++. .+ ...+..|+++|+++.. ...++.+.|+ ++||.+.|+..+ .+++||++ .
T Consensus 314 ~~~---~~--~~~p~gg~f~~~~~~~----------~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~--~ 376 (393)
T TIGR03538 314 GQV---LD--LELPDAGFYLWPKVPG----------DDEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIAL--V 376 (393)
T ss_pred Hhh---Cc--ccCCCeeEEEEEECCC----------CHHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEe--c
Confidence 332 11 1234457788888730 1245777765 579999887543 36899964 4
Q ss_pred CcHHHHHHHHHHHHHH
Q 011777 458 FTKDDADFLVDALDYS 473 (477)
Q Consensus 458 ~t~e~i~~~l~~l~~~ 473 (477)
.+++++++++++|.+.
T Consensus 377 ~~~~~l~~~l~~l~~~ 392 (393)
T TIGR03538 377 APLEECVEAAERIRSF 392 (393)
T ss_pred CCHHHHHHHHHHHHHh
Confidence 5799999999999874
No 166
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.93 E-value=2.6e-23 Score=211.53 Aligned_cols=337 Identities=16% Similarity=0.151 Sum_probs=203.6
Q ss_pred CEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccccC-ChHHHHHHHHHHhhC-----CCCCCEEEEeCChHHHHH
Q 011777 96 RRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIYL-HHAIADFAEALASKM-----PGNLKVVYFVNSGTEANE 169 (477)
Q Consensus 96 ~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~~-~~~~~~l~~~La~~~-----~~~~~~v~~~~sGseA~~ 169 (477)
..++||..|... ++ .++.+.+++.+...... .|. .....++++.+++++ +.+.++|++|+||++|+.
T Consensus 30 ~~~i~l~~~~~~--~~-~~~~~~~a~~~~~~~~~----~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~G~~~al~ 102 (397)
T PRK07568 30 IKVYHLNIGQPD--IK-TPEVFFEAIKNYDEEVL----AYSHSQGIPELREAFAKYYKKWGIDVEPDEILITNGGSEAIL 102 (397)
T ss_pred CCEEEecCCCCC--CC-CCHHHHHHHHHHhcCCc----CcCCCCCCHHHHHHHHHHHHHhCCCCCcceEEEcCChHHHHH
Confidence 356777766642 22 36788888876543221 121 122344444444443 345678999999999999
Q ss_pred HHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCC
Q 011777 170 LAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTS 249 (477)
Q Consensus 170 ~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~ 249 (477)
.+++... .+++.|++.+++|..+....... |...++++......+..+. .++++++++
T Consensus 103 ~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~-------------g~~~~~v~~~~~~g~~~~~---~~~l~~~~~---- 160 (397)
T PRK07568 103 FAMMAIC--DPGDEILVPEPFYANYNGFATSA-------------GVKIVPVTTKIEEGFHLPS---KEEIEKLIT---- 160 (397)
T ss_pred HHHHHhc--CCCCEEEEecCCCccHHHHHHHc-------------CCEEEEeecCcccCCCCCC---HHHHHHhcC----
Confidence 9887653 35678999888887543321111 2222222221111111100 366777664
Q ss_pred CCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccc-cccCCCccee---eeccccc-
Q 011777 250 GKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGF-ETQGVIPDIV---TMAKGIG- 324 (477)
Q Consensus 250 ~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~-~~~gv~pDiv---t~sK~lg- 324 (477)
.++++|++...++++| ...+.+.+++|.++|+++|+++|+||+|.+|.+.+..+..+ ...+..+.++ +|||.++
T Consensus 161 ~~~~~v~i~~p~NPtG-~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~ 239 (397)
T PRK07568 161 PKTKAILISNPGNPTG-VVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSA 239 (397)
T ss_pred ccceEEEEECCCCCCC-ccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhccC
Confidence 2455555444456666 56678889999999999999999999999987655222222 2222233333 7999999
Q ss_pred CccceEEEEeC-HHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeec
Q 011777 325 NGLPLGAVVTT-PEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRG 403 (477)
Q Consensus 325 ~G~pig~v~~~-~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g 403 (477)
.|+|+||++++ +++++.+..... .+++.+.+.+.++.++|+.. +.+.+++++..+..++.+.+...+++.+....+
T Consensus 240 ~G~R~G~~~~~~~~~~~~~~~~~~-~~~~~s~~~q~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p 316 (397)
T PRK07568 240 CGARIGCLISKNKELIAAAMKLCQ-ARLSPPTLEQIGAAALLDTP--ESYFDEVREEYKKRRDILYEELNKIPGVVCEKP 316 (397)
T ss_pred CCcceEEEecCCHHHHHHHHHHhh-ccCCCCcHHHHHHHHHhhCC--HHHHHHHHHHHHHHHHHHHHHHhcCCCceecCC
Confidence 49999999985 678776654322 25677888888888888632 233333333333333333333333433333334
Q ss_pred c-ceeEEEEEeeCCCCCCccHHHHHHHHHHHHH------cCceeeccCCC-------CCEEEEeCCCCCcHHHHHHHHHH
Q 011777 404 R-GLMVGMELVTDRKEKTPAKAETAVLFEKLRE------LGVLVGKGGLH-------GNVFRIKPPMCFTKDDADFLVDA 469 (477)
Q Consensus 404 ~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~------~Gv~v~~~~~~-------~~~iRi~p~~~~t~e~i~~~l~~ 469 (477)
. |+++|+.+... ...++.+.|.+ +||.+.|+..+ .+++||+. ..+++++++++++
T Consensus 317 ~g~~~~~~~l~~~---------~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~--~~~~~~~~~~~~~ 385 (397)
T PRK07568 317 KGAFYIIAKLPVD---------DAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAY--VLNEEDLKRAMEI 385 (397)
T ss_pred CcceEEEEecCCC---------CHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEE--eCCHHHHHHHHHH
Confidence 4 45667776321 13456666654 69999987432 36899975 4678999999999
Q ss_pred HHHHHhh
Q 011777 470 LDYSMSK 476 (477)
Q Consensus 470 l~~~l~~ 476 (477)
|.+++++
T Consensus 386 l~~~l~~ 392 (397)
T PRK07568 386 LKEALEK 392 (397)
T ss_pred HHHHHHH
Confidence 9998864
No 167
>PRK06855 aminotransferase; Validated
Probab=99.93 E-value=4.5e-23 Score=211.41 Aligned_cols=357 Identities=11% Similarity=0.007 Sum_probs=209.5
Q ss_pred CCEEEeecCCcccccCCC-CCHHHHHHHHHHHhhc---cccccccCChHHHHHHHHHHhhC--CCCCCEEEEeCChHHHH
Q 011777 95 GRRYLDAFAGIVTVSCGH-CHPDVLNAIFEQSKLL---QHATTIYLHHAIADFAEALASKM--PGNLKVVYFVNSGTEAN 168 (477)
Q Consensus 95 G~~ylD~~~g~~~~~lGh-~~p~v~~Av~~~l~~~---~~~~~~~~~~~~~~l~~~La~~~--~~~~~~v~~~~sGseA~ 168 (477)
|+..+++..|.+.. .+. .++.+.+++.+.+... .+....+..+.++.+++++.+.. +.+.++|++|+|+++|+
T Consensus 31 g~~~~~~~~G~p~~-~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G~~~al 109 (433)
T PRK06855 31 GVKITWENIGDPIA-KGEKIPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNGLGDAI 109 (433)
T ss_pred cccccccccCCCcc-cCCCCCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCcHHHHH
Confidence 34455554443311 122 4677888888766432 12222334456667777776653 34567899999999999
Q ss_pred HHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccC
Q 011777 169 ELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGT 248 (477)
Q Consensus 169 ~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~ 248 (477)
..++.+ ..+++.|++.+++|+++........ +...+.+|......+..| +++|++.++..
T Consensus 110 ~~~~~l---~~~Gd~Vlv~~P~Y~~~~~~~~~~~------------g~~~v~v~~~~~~~~~~d----~~~l~~~~~~~- 169 (433)
T PRK06855 110 AKIYGL---LRREARVIGPSPAYSTHSSAEAAHA------------GYPPVTYRLDPENNWYPD----LDDLENKVKYN- 169 (433)
T ss_pred HHHHHh---cCCCCeEEEeCCCCchHHHHHHHhc------------CCeEEEEecccccCCCCC----HHHHHHHHhcC-
Confidence 988752 3467889999999998643211111 111222211111112112 47888877521
Q ss_pred CCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccc-ccc-C-CCcceeeeccccc-
Q 011777 249 SGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGF-ETQ-G-VIPDIVTMAKGIG- 324 (477)
Q Consensus 249 ~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~-~~~-g-v~pDivt~sK~lg- 324 (477)
++..++++++| +|++| .+++++.+++|.++|++||++||+||+|..|.+.+..+..+ ... + ...-+-+|||.++
T Consensus 170 ~~~~~i~l~~P-~NPTG-~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~ 247 (433)
T PRK06855 170 PSIAGILLINP-DNPTG-AVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKGISKELPW 247 (433)
T ss_pred CCceEEEEECC-CCCCC-cCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCeEEEecCccccCC
Confidence 12234556666 55666 56789999999999999999999999999886655222221 111 1 1223347999998
Q ss_pred CccceEEEEeC-----H---HHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCC
Q 011777 325 NGLPLGAVVTT-----P---EIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHD 396 (477)
Q Consensus 325 ~G~pig~v~~~-----~---~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~ 396 (477)
.|+|+||++++ + ++++.+..... ...+.+.++|.++.++|+.-.-++++++.++..+..++.+.+...+++
T Consensus 248 pGlRiG~ii~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~~ 326 (433)
T PRK06855 248 PGSRCGWIEVYNADKDEVFKKYINSILNAKM-IEVCSTTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDVP 326 (433)
T ss_pred CcceEEEEEEeCCchhhHHHHHHHHHHHhhc-cccCCChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 79999999973 2 23333322221 244567888988888875322233444444444444444444444443
Q ss_pred Cceeeecc-ceeEEEEEeeCCC-----CCCc--cH------------HHHHHHH-HHHHHcCceeeccCCCC---CEEEE
Q 011777 397 IIGDVRGR-GLMVGMELVTDRK-----EKTP--AK------------AETAVLF-EKLRELGVLVGKGGLHG---NVFRI 452 (477)
Q Consensus 397 ~~~~v~g~-g~~~~i~~~~~~~-----~~~~--~~------------~~~~~~~-~~l~~~Gv~v~~~~~~~---~~iRi 452 (477)
.+...++. |+++|+.+..... .+.. +. ....++. ..+.++||.+.|+..++ +.+||
T Consensus 327 ~~~~~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~~~~~Rl 406 (433)
T PRK06855 327 GLKVNRTNGAFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTELNGFRV 406 (433)
T ss_pred CeeccCCCeeEEEeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCCCCceEE
Confidence 23323444 5777887743100 0000 00 0012333 45678899999985442 46899
Q ss_pred eCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 453 KPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 453 ~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
+... .++++|++++++|.+++++
T Consensus 407 s~~~-~~~~~i~~~~~~l~~~~~~ 429 (433)
T PRK06855 407 TLLE-RDEEKFEWIYQTLAEKIEE 429 (433)
T ss_pred EECC-CcHHHHHHHHHHHHHHHHH
Confidence 7654 5899999999999998864
No 168
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=5.8e-23 Score=205.28 Aligned_cols=322 Identities=17% Similarity=0.132 Sum_probs=210.8
Q ss_pred EEeecCCcccccCCCCCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHh
Q 011777 98 YLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARL 177 (477)
Q Consensus 98 ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~ 177 (477)
.+|+..|.. .++ .++.+++++.+.+.... ...|..+...++++.++++++.+.++|++++|+++++..+++...
T Consensus 24 ~~~l~~~~~--~~~-~p~~~~~a~~~~~~~~~--~~~y~~~~~~~lr~~ia~~~~~~~~~i~it~G~~~~l~~~~~~l~- 97 (351)
T PRK14807 24 KYKMDANET--PFE-LPEEVIKNIQEIVKSSQ--VNIYPDPTAEKLREELARYCSVVPTNIFVGNGSDEIIHLIMLAFI- 97 (351)
T ss_pred eeEccCCCC--CCC-CCHHHHHHHHHHhhcCc--ccCCCCccHHHHHHHHHHHhCCCcccEEEecCHHHHHHHHHHHhc-
Confidence 466665554 455 57899999988775321 223444556789999999987777899999999999998887652
Q ss_pred ccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEe
Q 011777 178 STGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIA 257 (477)
Q Consensus 178 ~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~ 257 (477)
.+++.|++.+++|.++....... |...+.++... .++.| .+++++.++ ..++++|++
T Consensus 98 -~~gd~Vlv~~p~y~~~~~~~~~~-------------g~~~~~v~~~~--~~~~d----~~~l~~~~~---~~~~k~v~l 154 (351)
T PRK14807 98 -NKGDVVIYPHPSFAMYSVYSKIA-------------GAVEIPVKLKE--DYTYD----VGSFIKVIE---KYQPKLVFL 154 (351)
T ss_pred -CCCCEEEEeCCChHHHHHHHHHc-------------CCeEEEeecCC--CCCCC----HHHHHHHhh---ccCCCEEEE
Confidence 35678999999998654432222 22222222110 11112 467777775 235666666
Q ss_pred cccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCcc-ccccCCCcceeeeccccc-CccceEEEEeC
Q 011777 258 ETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWG-FETQGVIPDIVTMAKGIG-NGLPLGAVVTT 335 (477)
Q Consensus 258 epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~-~~~~gv~pDivt~sK~lg-~G~pig~v~~~ 335 (477)
...+|++|.+.+ .+++.++|++++.++|+||+|.+|. +..... .+..+...-+-+|||.++ .|+|+||++++
T Consensus 155 ~~p~NPtG~~~~----~~~l~~l~~~~~~~~ivDe~y~~~~--~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~ 228 (351)
T PRK14807 155 CNPNNPTGSVIE----REDIIKIIEKSRGIVVVDEAYFEFY--GNTIVDVINEFENLIVLRTLSKAFGLAGLRVGYAVAN 228 (351)
T ss_pred eCCCCCCCCCCC----HHHHHHHHHhCCCEEEEeCcchhhc--ccchHHHhhhCCCEEEEecchHhcccchhceeeeecC
Confidence 666777886665 6777788888888999999998773 312211 122222222347999998 79999999999
Q ss_pred HHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeC
Q 011777 336 PEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTD 415 (477)
Q Consensus 336 ~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~ 415 (477)
+++++.+..... .++.+.+++.++.+.|+...-++..++++++.+++.+.|++ .+.+...++.|.++|+.+.
T Consensus 229 ~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~r~~l~~~l~~----~~g~~~~~~~~~~~~i~~~-- 300 (351)
T PRK14807 229 ENILKYLNLVKS--PYNINSLSQVIALKVLRTGVLKERVNYILNERERLIKELSK----IPGIKVYPSKTNFILVKFK-- 300 (351)
T ss_pred HHHHHHHHHccC--CCCcCHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh----CCCcEECcCCccEEEEEcC--
Confidence 999988875432 35667888888888876321123334444445555554433 3323334556778887762
Q ss_pred CCCCCccHHHHHHHHHHHHHcCceeeccCC---CCCEEEEeCCCCCcHHHHHHHHHHHHHHH
Q 011777 416 RKEKTPAKAETAVLFEKLRELGVLVGKGGL---HGNVFRIKPPMCFTKDDADFLVDALDYSM 474 (477)
Q Consensus 416 ~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~---~~~~iRi~p~~~~t~e~i~~~l~~l~~~l 474 (477)
. ...+.+.|+++||.+.+... ..+++||+.. +.++.+++++.|++++
T Consensus 301 ------~---~~~~~~~l~~~gV~v~~~~~~~~~~~~iRis~~---~~~~~~~l~~~l~~~~ 350 (351)
T PRK14807 301 ------D---ADYVYQGLLERGILVRDFSKVEGLEGALRITVS---SCEANDYLINGLKELL 350 (351)
T ss_pred ------C---HHHHHHHHHHCCEEEEECCCCCCCCCeEEEEcC---CHHHHHHHHHHHHHhh
Confidence 1 35688889999999977532 2468999643 6788999999998764
No 169
>PRK09105 putative aminotransferase; Provisional
Probab=99.93 E-value=3.7e-23 Score=207.85 Aligned_cols=321 Identities=15% Similarity=0.129 Sum_probs=206.0
Q ss_pred EEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHH
Q 011777 97 RYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMAR 176 (477)
Q Consensus 97 ~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar 176 (477)
.++|+..|. ++++ .+|.+.+++.+.+.... .|..+...+|++.+++.++.+.++|++|+|+++++..++....
T Consensus 44 ~~i~l~~~~--~~~~-~~~~~~~a~~~~~~~~~----~Y~~~~~~~Lr~aia~~~~v~~e~I~it~Gs~~ai~~~~~~l~ 116 (370)
T PRK09105 44 GAVFLNANE--CPLG-PSPAARDAAARSAALSG----RYDLELEDDLRTLFAAQEGLPADHVMAYAGSSEPLNYAVLAFT 116 (370)
T ss_pred CcEEecCCC--CCCC-CCHHHHHHHHHHHHHhc----CCCCchHHHHHHHHHHHhCcChhhEEEcCChHHHHHHHHHHHc
Confidence 445555544 2455 57899999988765422 3555557889999999988788899999999999999988653
Q ss_pred hccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEE
Q 011777 177 LSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFI 256 (477)
Q Consensus 177 ~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi 256 (477)
.+++.|++.+++|.++...+... |...+.+|... .+..| .+++++.. ++....++
T Consensus 117 --~~gd~Vli~~P~y~~~~~~~~~~-------------g~~~~~v~~~~--~~~~d----~~~l~~~~----~~~~~v~l 171 (370)
T PRK09105 117 --SPTAGLVTADPTYEAGWRAADAQ-------------GAPVAKVPLRA--DGAHD----VKAMLAAD----PNAGLIYI 171 (370)
T ss_pred --CCCCEEEEeCCChHHHHHHHHHc-------------CCeEEEecCCC--CCCCC----HHHHHhcC----CCCCEEEE
Confidence 35678999999998775443322 22222222211 11111 34454431 22234455
Q ss_pred ecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCccee---eeccccc-CccceEEE
Q 011777 257 AETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIV---TMAKGIG-NGLPLGAV 332 (477)
Q Consensus 257 ~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDiv---t~sK~lg-~G~pig~v 332 (477)
++| +|++|. ..+++.++++.+.|+ +|+++|+||+|..|+... .. .+..+..++++ +|||.+| .|+|+||+
T Consensus 172 ~nP-~NPTG~-~~~~~~l~~l~~~~~-~~~~lIvDEaY~~f~~~~-s~--~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~ 245 (370)
T PRK09105 172 CNP-NNPTGT-VTPRADIEWLLANKP-AGSVLLVDEAYIHFSDAP-SV--VDLVAQRKDLIVLRTFSKLYGMAGMRLGLA 245 (370)
T ss_pred eCC-CCCCCc-CcCHHHHHHHHHhCC-CCcEEEEECchHHhccCc-ch--HHHHhhCCCEEEEecccHhhcCCccceeee
Confidence 566 566664 467788888888764 599999999998775321 11 12222234433 6899998 69999999
Q ss_pred EeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEE
Q 011777 333 VTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMEL 412 (477)
Q Consensus 333 ~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~ 412 (477)
++++++++.+... ..++.+.+++.++.++|+. +++.+..++..+..++.+.+...+++. ...++.|.|+++++
T Consensus 246 v~~~~~i~~l~~~---~~~~~~~~~~~aa~~~L~~---~~~~~~~~~~~~~~r~~l~~~L~~~g~-~~~~~~~~f~~~~~ 318 (370)
T PRK09105 246 AARPDLLAKLARF---GHNPLPVPAAAAGLASLRD---PKLVPQRRAENAAVREDTIAWLKKKGY-KCTPSQANCFMVDV 318 (370)
T ss_pred ecCHHHHHHHHhc---CCCCcCHHHHHHHHHHHhC---HHHHHHHHHHHHHHHHHHHHHHHHCCC-CcCCCCCcEEEEeC
Confidence 9999999887654 3445677777787777752 344444444444444444443333432 23345677766554
Q ss_pred eeCCCCCCccHHHHHHHHHHHHHcCceeeccC-CCCCEEEEeCCCCCcHHHHHHHHHHHHHHHh
Q 011777 413 VTDRKEKTPAKAETAVLFEKLRELGVLVGKGG-LHGNVFRIKPPMCFTKDDADFLVDALDYSMS 475 (477)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~-~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~ 475 (477)
.. ...++.+.|.++||.++... ...+++||++. ++++++++++.|+++++
T Consensus 319 ~~----------~~~~l~~~L~~~gI~v~~~~~~~~~~~Ris~~---~~~~~~~l~~al~~~~~ 369 (370)
T PRK09105 319 KR----------PAKAVADAMAKQGVFIGRSWPIWPNWVRVTVG---SEEEMAAFRSAFAKVMR 369 (370)
T ss_pred CC----------CHHHHHHHHHHCCcEEecCCCCCCCeEEEEcC---CHHHHHHHHHHHHHHhh
Confidence 21 13578888999999984321 13579999644 68899999999998763
No 170
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.93 E-value=9e-24 Score=204.55 Aligned_cols=334 Identities=17% Similarity=0.164 Sum_probs=219.1
Q ss_pred EEEeecCCcccccCCCCCHHHHHHHHHHHhhc-cc-----cccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHH
Q 011777 97 RYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLL-QH-----ATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANEL 170 (477)
Q Consensus 97 ~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~-~~-----~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~ 170 (477)
-|+|..+... .+|+|++++...+... .+ ..+.......++.++.+++.++.+.+.|+||+||||+|.+
T Consensus 3 iYlD~~ATTp------~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~~~eIiFTSG~TEsnNl 76 (386)
T COG1104 3 IYLDNAATTP------VDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLLGADPEEIIFTSGATESNNL 76 (386)
T ss_pred ccccccccCC------CCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHhCCCCCeEEEecCCcHHHHH
Confidence 5899888775 5899999999988764 11 1111234556788899999999888999999999999999
Q ss_pred HHHHHH-hc--cCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhcc
Q 011777 171 AMLMAR-LS--TGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFG 247 (477)
Q Consensus 171 Al~~ar-~~--~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~ 247 (477)
||+-+. .+ .++.+-|+....-|-....+..-..... .++..++. ...+..+ +++|+++|+
T Consensus 77 aI~g~~~a~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g-------~~Vtyl~V--~~~G~v~------~e~L~~al~-- 139 (386)
T COG1104 77 AIKGAALAYRNAQKGKHIITSAIEHPAVLNTCRYLERQG-------FEVTYLPV--DSNGLVD------LEQLEEALR-- 139 (386)
T ss_pred HHHhhHHhhhcccCCCeEEEcccccHHHHHHHHHHHhcC-------CeEEEeCC--CCCCeEc------HHHHHHhcC--
Confidence 999532 22 1233334444555543222221111111 12222221 1122222 688999887
Q ss_pred CCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCcceeeec-ccccCc
Q 011777 248 TSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMA-KGIGNG 326 (477)
Q Consensus 248 ~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~s-K~lg~G 326 (477)
+++.+|.+...||+.|+++| +++|.++|+++|+++++|.||+ +|+.. ++......|+++|| -.|+|.
T Consensus 140 --~~T~LVSim~aNnE~G~IQp----I~ei~~i~k~~~i~fHvDAvQa-~Gkip-----i~~~~~~vD~ls~SaHK~~Gp 207 (386)
T COG1104 140 --PDTILVSIMHANNETGTIQP----IAEIGEICKERGILFHVDAVQA-VGKIP-----IDLEELGVDLLSFSAHKFGGP 207 (386)
T ss_pred --CCceEEEEEecccCeeeccc----HHHHHHHHHHcCCeEEEehhhh-cCcee-----ccccccCcceEEeehhhccCC
Confidence 57899999999999999999 9999999999999999999998 76543 34444457999998 334444
Q ss_pred cceEEEEeCHHHHHhhcccccccCC-------CCcHHHHHHHHHHHHhhch--hhHHHHHHHHHHHHHHHHHHHHHhCCC
Q 011777 327 LPLGAVVTTPEIANVMAQKIQFNTF-------GGNPVCSAGGLAVLRVIDK--ERRQAHCADVGSHLLGRLRTLQERHDI 397 (477)
Q Consensus 327 ~pig~v~~~~~~~~~~~~~~~~~t~-------~~~~~~~aaa~a~l~~l~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~ 397 (477)
-.+|+++.++.+. +.+..+++.+ .-|..+.++..+++++..+ +...+++..++++|.++|.+.....-+
T Consensus 208 kGiGaLyv~~~~~--~~p~i~GGgQE~g~RsGTenv~~Ivg~~~A~~~a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~ 285 (386)
T COG1104 208 KGIGALYVRPGVR--LEPLIHGGGQERGLRSGTENVPGIVGFGKAAEIAVEELEEENARLRKLRDRLEDGLLEIIPDVYL 285 (386)
T ss_pred CceEEEEECCCCc--cCceeccCcCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEE
Confidence 5789999877654 3333333322 1245555565666665433 456677788888888887764211111
Q ss_pred cee-eeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCC---------------------CCCEEEEeCC
Q 011777 398 IGD-VRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGL---------------------HGNVFRIKPP 455 (477)
Q Consensus 398 ~~~-v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~---------------------~~~~iRi~p~ 455 (477)
.+. .......+.+.|.. ...+.+...|..+||.+..|.. ..+.|||++.
T Consensus 286 ~g~~~~rlP~~~~~~f~g---------v~gE~ll~~L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g 356 (386)
T COG1104 286 NGDDEPRLPNILNFSFPG---------VEGESLLLALDLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLG 356 (386)
T ss_pred cCCcccCCCCeEEEEeCC---------CcHHHHHHhccccCeEEeccccccCCCCCccHHHHHcCCChHHhCccEEEEcC
Confidence 111 11122333444421 1245677777778999977611 1257999999
Q ss_pred CCCcHHHHHHHHHHHHHHHhh
Q 011777 456 MCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 456 ~~~t~e~i~~~l~~l~~~l~~ 476 (477)
...|++|+|++++.|.+++++
T Consensus 357 ~~tt~eei~~~~~~l~~~i~~ 377 (386)
T COG1104 357 RFTTEEEIDAAAEALKEIIKR 377 (386)
T ss_pred CCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999998875
No 171
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.92 E-value=3e-23 Score=206.80 Aligned_cols=325 Identities=18% Similarity=0.164 Sum_probs=209.2
Q ss_pred ccccCCCCCHHHHHHHHHHHhhccc----cccccCChHHHHHHHHHHhhCC--CCCCEEEEeCChHHHHHHHHHHHHhcc
Q 011777 106 VTVSCGHCHPDVLNAIFEQSKLLQH----ATTIYLHHAIADFAEALASKMP--GNLKVVYFVNSGTEANELAMLMARLST 179 (477)
Q Consensus 106 ~~~~lGh~~p~v~~Av~~~l~~~~~----~~~~~~~~~~~~l~~~La~~~~--~~~~~v~~~~sGseA~~~Al~~ar~~~ 179 (477)
+..+++ .+|.+++++.+ ...... ....+..+....+++.+....+ ...+.+++++||++|+..+++.+..
T Consensus 6 ~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~-- 81 (350)
T cd00609 6 GEPDFP-PPPEVLEALAA-AALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALLN-- 81 (350)
T ss_pred CCCCCC-CCHHHHHHHHH-HhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhCC--
Confidence 334555 35666666654 111111 1111223334445555544432 2256899999999999999987643
Q ss_pred CCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecc
Q 011777 180 GNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAET 259 (477)
Q Consensus 180 ~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~ep 259 (477)
.+++|++..++|++......... .....++.........+ .+.++..+ .+++++|++++
T Consensus 82 ~g~~vl~~~~~~~~~~~~~~~~~-------------~~~~~i~~~~~~~~~~~----~~~~~~~~----~~~~~~v~i~~ 140 (350)
T cd00609 82 PGDEVLVPDPTYPGYEAAARLAG-------------AEVVPVPLDEEGGFLLD----LELLEAAK----TPKTKLLYLNN 140 (350)
T ss_pred CCCEEEEcCCCchhHHHHHHHCC-------------CEEEEEecccccCCccC----HHHHHhhc----CccceEEEEEC
Confidence 46788888888887654433321 11111111111111100 12333332 35788999999
Q ss_pred cCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCc----cccccCCCcceeeeccccc-CccceEEEEe
Q 011777 260 IQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYW----GFETQGVIPDIVTMAKGIG-NGLPLGAVVT 334 (477)
Q Consensus 260 i~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~----~~~~~gv~pDivt~sK~lg-~G~pig~v~~ 334 (477)
.++++|. ..+.+.+++|.++|+++|+++|+||+|+++...+ ... ..+..+....+.+++|.++ +|+++|++++
T Consensus 141 ~~~~tG~-~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~ 218 (350)
T cd00609 141 PNNPTGA-VLSEEELEELAELAKKHGILIISDEAYAELVYDG-EPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIA 218 (350)
T ss_pred CCCCCCc-ccCHHHHHHHHHHHHhCCeEEEEecchhhceeCC-cccccccCcCccCcEEEEeecccccCCcccceEEEec
Confidence 8888885 4578889999999999999999999999887655 322 1222233333447899999 7899999999
Q ss_pred CH-HHHHhhcccccccCCCCcHHHHHHHHHHHHhhc--hhhHHHHHHHHHHHHHHHHHHHHHhCCCce-eeeccceeEEE
Q 011777 335 TP-EIANVMAQKIQFNTFGGNPVCSAGGLAVLRVID--KERRQAHCADVGSHLLGRLRTLQERHDIIG-DVRGRGLMVGM 410 (477)
Q Consensus 335 ~~-~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~--~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~-~v~g~g~~~~i 410 (477)
++ ++.+.+.......+++.+..++.++..+++... .+...+++.++.+++++.|.+. +... .....|.++++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~~~~~g~~~~~ 294 (350)
T cd00609 219 PPEELLERLKKLLPYTTSGPSTLSQAAAAAALDDGEEHLEELRERYRRRRDALLEALKEL----GPLVVVKPSGGFFLWL 294 (350)
T ss_pred CHHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhc----CCccccCCCccEEEEE
Confidence 99 788888766666677888999998888888652 2344555666666666666553 2222 34455777777
Q ss_pred EEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCC----CCCEEEEeCCCCCcHHHHHHHHHHHH
Q 011777 411 ELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGL----HGNVFRIKPPMCFTKDDADFLVDALD 471 (477)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~----~~~~iRi~p~~~~t~e~i~~~l~~l~ 471 (477)
.+... .....+.+.|.+.||.+.++.. .++++|++++.. ++|+++++++|+
T Consensus 295 ~~~~~--------~~~~~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~--~~~i~~~~~al~ 349 (350)
T cd00609 295 DLPEG--------DDEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATP--EEELEEALERLA 349 (350)
T ss_pred ecCCC--------ChHHHHHHHHHhCCEEEecccccccCCCCeEEEEeeCC--HHHHHHHHHHhh
Confidence 76321 1244567777788999987632 357999998877 999999999886
No 172
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.92 E-value=4.9e-23 Score=203.92 Aligned_cols=307 Identities=16% Similarity=0.092 Sum_probs=201.1
Q ss_pred CEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHH
Q 011777 96 RRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMA 175 (477)
Q Consensus 96 ~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~a 175 (477)
..++|+.++. +++|.+.+.+.+ ..+.. |+.+. .+|++.|++++. .++|++|+|++||+..++.
T Consensus 20 ~~~i~l~~ne--~p~~~~~~~~~~---~~~~~-------yp~~~-~~Lr~~ia~~~~--~~~I~it~Gs~~al~~~~~-- 82 (330)
T PRK05664 20 ADWLDLSTGI--APWPWPVPAIPA---DAWAR-------LPETD-DGLEAAARAYYG--APQLLPVAGSQAAIQALPR-- 82 (330)
T ss_pred HHheeecCCc--CCCCCCCcccCH---HHHHh-------CCCCh-HHHHHHHHHHhC--CCCEEECcCHHHHHHHHHH--
Confidence 3578888876 467765444432 22222 33333 688899999885 4789999999999988753
Q ss_pred HhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEE
Q 011777 176 RLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGF 255 (477)
Q Consensus 176 r~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~v 255 (477)
. .+++.|++.+++|.++...+... |...+.+| .+++++.++ +....+
T Consensus 83 -~-~~gd~v~v~~P~y~~~~~~~~~~-------------g~~~~~v~--------------~~~~~~~~~----~~~~v~ 129 (330)
T PRK05664 83 -L-RAPGRVGVLSPCYAEHAHAWRRA-------------GHQVRELD--------------EAEVEAALD----SLDVLV 129 (330)
T ss_pred -c-cCCCEEEEcCCChHHHHHHHHHc-------------CCeEEEec--------------hhhHhhhhc----CCCEEE
Confidence 2 35678999999998876544433 22222222 134555554 222567
Q ss_pred EecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCcceeeeccccc-CccceEEEEe
Q 011777 256 IAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIG-NGLPLGAVVT 334 (477)
Q Consensus 256 i~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg-~G~pig~v~~ 334 (477)
+++|. |++| ...+.+.+++|.++|+++|++||+||+|.+|.... .+......+...-+-+|||.+| .|+|+||+++
T Consensus 130 l~nP~-NPTG-~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~~~-s~~~~~~~~~vi~~~SfSK~~gl~GlRiG~~v~ 206 (330)
T PRK05664 130 VVNPN-NPTG-RRFDPARLLAWHARLAARGGWLVVDEAFMDNTPQH-SLAACAHRPGLIVLRSFGKFFGLAGARLGFVLA 206 (330)
T ss_pred EeCCc-CCCC-CccCHHHHHHHHHHHHhcCCEEEEECCcccCCCcc-cccccccCCCEEEEeeccccccCCCcceEEEEe
Confidence 88886 5566 45688889999999999999999999998774322 2222221111122447999999 7999999999
Q ss_pred CHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhch-hhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEe
Q 011777 335 TPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDK-ERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELV 413 (477)
Q Consensus 335 ~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~ 413 (477)
++++++.+.... .+++.+.+++.++.++|+.... +...+.+.++.+++.+.|++ ++.. ...+.++++++.+
T Consensus 207 ~~~l~~~~~~~~--~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~----~~~~-~~~~~~~f~~~~~- 278 (330)
T PRK05664 207 EPALLRALAELL--GPWTVSGPTRWLAQAALADTPWQRRQRERLLAASQRLAALLRR----HGLT-PAGGCALFQWVRT- 278 (330)
T ss_pred CHHHHHHHHHhc--CCCCCCHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHH----CCCc-ccCCcceEEEEec-
Confidence 999998887543 3556778888888888864221 22334444444445444443 4321 1223335666654
Q ss_pred eCCCCCCccHHHHHHHHHHHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 414 TDRKEKTPAKAETAVLFEKLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
+ ...++.+.|.++||.+...+ ..+++||+.. .++++++++++.|++..++
T Consensus 279 -------~---~~~~~~~~l~~~gi~v~~f~-~~~~iRis~~--~~~~~~~~l~~al~~~~~~ 328 (330)
T PRK05664 279 -------E---DAAALHEFLARRGILTRLFE-QPASLRFGLP--ADEADWARLDQALLAYRKE 328 (330)
T ss_pred -------C---CHHHHHHHHHHCCeEEEECC-CCCeEEEECC--CCHHHHHHHHHHHHHHHhh
Confidence 1 13578888999999998643 3578999644 3678899999999877653
No 173
>PRK07337 aminotransferase; Validated
Probab=99.92 E-value=8.9e-23 Score=206.86 Aligned_cols=340 Identities=16% Similarity=0.144 Sum_probs=210.2
Q ss_pred CEEEeecCCcccccCCCCCHHHHHHHHHHHhhcc--ccccccCChHHHHHHHHHHhhCC--CCCCEEEEeCChHHHHHHH
Q 011777 96 RRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQ--HATTIYLHHAIADFAEALASKMP--GNLKVVYFVNSGTEANELA 171 (477)
Q Consensus 96 ~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~--~~~~~~~~~~~~~l~~~La~~~~--~~~~~v~~~~sGseA~~~A 171 (477)
..++||..+... ++ .+|.+.+++.+.+.... +....+..+.+..+++.+.+..+ .+.++|++|+|+++|+..+
T Consensus 30 ~~~i~l~~~~~~--~~-~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~al~~~ 106 (388)
T PRK07337 30 RDIIHMGIGEPD--FT-APEPVVEAAARALRRGVTQYTSALGLAPLREAIAAWYARRFGLDVAPERIVVTAGASAALLLA 106 (388)
T ss_pred CCEEEeCCcCCC--CC-CCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCChHhEEEecCcHHHHHHH
Confidence 346777776643 32 36889999988775321 11111223445555555554433 3557899999999999988
Q ss_pred HHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCC
Q 011777 172 MLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGK 251 (477)
Q Consensus 172 l~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~ 251 (477)
+.... .+++.|++.+++|.+......... ...+.+|......+..| .+++++.+. ++.
T Consensus 107 ~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~g-------------~~~~~~~~~~~~~~~~~----~~~l~~~~~---~~~ 164 (388)
T PRK07337 107 CLALV--ERGDEVLMPDPSYPCNRHFVAAAE-------------GRPVLVPSGPAERFQLT----AADVEAAWG---ERT 164 (388)
T ss_pred HHHhc--CCCCEEEEeCCCchhhHHHHHHcC-------------CEEEEeecCCccCCcCC----HHHHHhhcC---ccc
Confidence 87553 356789999999987644332221 11222221111112212 466776664 233
Q ss_pred eeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCccee---eeccccc-Ccc
Q 011777 252 VAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIV---TMAKGIG-NGL 327 (477)
Q Consensus 252 ~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDiv---t~sK~lg-~G~ 327 (477)
.+.+++.| ++++| ...+.+.+++|.++|++||+++|+||+|.+|...+ ..... ....++++ +|||.++ .|+
T Consensus 165 ~~v~l~~p-~NPtG-~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~-~~~~~--~~~~~~vi~~~S~SK~~~~~G~ 239 (388)
T PRK07337 165 RGVLLASP-SNPTG-TSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDA-APVSA--LSLGDDVITINSFSKYFNMTGW 239 (388)
T ss_pred eEEEEECC-CCCCC-cCcCHHHHHHHHHHHHHCCCEEEEeccccccccCC-CCcCh--hhccCCEEEEEechhhcCCchh
Confidence 34455555 55666 55688899999999999999999999999887654 22211 11223443 6899998 699
Q ss_pred ceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhch---hhHHHHHHHHHHHHHHHHHHHHHhCCCcee-eec
Q 011777 328 PLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDK---ERRQAHCADVGSHLLGRLRTLQERHDIIGD-VRG 403 (477)
Q Consensus 328 pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~-v~g 403 (477)
|+||+++++++++.+.........+.+.+++.++.++++.-.. ++..+.++++.+++.+.|++ .+.... .+.
T Consensus 240 RiG~~~~~~~l~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~----~~~~~~~~p~ 315 (388)
T PRK07337 240 RLGWLVVPEALVGTFEKLAQNLFICASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALES----LGFKVPVMPD 315 (388)
T ss_pred heeeeecCHHHHHHHHHHHHHhccCCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHh----cCCccccCCC
Confidence 9999999999988876554444556788888888877752111 12233334444444444433 333221 234
Q ss_pred cceeEEEEEeeCCCCCCccHHHHHHHHHH-HHHcCceeeccCCC-----CCEEEEeCCCCCcHHHHHHHHHHHHHHH
Q 011777 404 RGLMVGMELVTDRKEKTPAKAETAVLFEK-LRELGVLVGKGGLH-----GNVFRIKPPMCFTKDDADFLVDALDYSM 474 (477)
Q Consensus 404 ~g~~~~i~~~~~~~~~~~~~~~~~~~~~~-l~~~Gv~v~~~~~~-----~~~iRi~p~~~~t~e~i~~~l~~l~~~l 474 (477)
.|+++|+++..... +......++.+. +.++||.+.|+..+ .+++|++.. .+++++++++++|.+++
T Consensus 316 ~g~f~~~~~~~~~~---~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~--~~~~~l~~~l~rl~~~l 387 (388)
T PRK07337 316 GAFYVYADCRGVAH---PAAGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYA--TSMSRLEEAVARLGKLF 387 (388)
T ss_pred eeEEEEEecccccC---CCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEEec--CCHHHHHHHHHHHHHHh
Confidence 57888998842100 111123456655 56789999887433 368999765 47899999999998865
No 174
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.92 E-value=1.1e-22 Score=206.97 Aligned_cols=350 Identities=13% Similarity=0.058 Sum_probs=209.4
Q ss_pred CCCEEEeecCCcccc-cCCCCCHHHHHHHHHHHhhcccccccc-CChHHHHHHHHHHhhCC------CCCCEEEEeCChH
Q 011777 94 NGRRYLDAFAGIVTV-SCGHCHPDVLNAIFEQSKLLQHATTIY-LHHAIADFAEALASKMP------GNLKVVYFVNSGT 165 (477)
Q Consensus 94 dG~~ylD~~~g~~~~-~lGh~~p~v~~Av~~~l~~~~~~~~~~-~~~~~~~l~~~La~~~~------~~~~~v~~~~sGs 165 (477)
.|..++|+..|.+.. +.=..++++.+++.+.+..... ..| ......++++.+++++. .+.++|++|+|++
T Consensus 29 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~--~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ii~t~G~t 106 (403)
T TIGR01265 29 PEKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKF--NGYAPSVGALAAREAVAEYLSSDLPGKLTADDVVLTSGCS 106 (403)
T ss_pred cCCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCC--CCCCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecChH
Confidence 467889998887642 1112578999999887764211 122 22334455555555543 2356899999999
Q ss_pred HHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHh
Q 011777 166 EANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHID 245 (477)
Q Consensus 166 eA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~ 245 (477)
+|+..+++... .+++.|++.+++|.++....... |...+.++......+..| .+++++++.
T Consensus 107 ~al~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~-------------g~~~~~~~~~~~~~~~~d----~~~l~~~~~ 167 (403)
T TIGR01265 107 QAIEICIEALA--NPGANILVPRPGFPLYDTRAAFS-------------GLEVRLYDLLPEKDWEID----LDGLEALAD 167 (403)
T ss_pred HHHHHHHHHhC--CCCCEEEEeCCCchhHHHHHHHc-------------CCEEEEecCCcccCCccC----HHHHHHHhC
Confidence 99999998764 35678999998886553322211 222222111100111111 467777664
Q ss_pred ccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCc---ceeeeccc
Q 011777 246 FGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIP---DIVTMAKG 322 (477)
Q Consensus 246 ~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~p---Divt~sK~ 322 (477)
.+++++++...++++| ...+.+.+++|.++|+++|+++|+||+|..|.+.+..+..+....-.. -+-+|||.
T Consensus 168 ----~~~~~v~i~~p~NPtG-~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~ 242 (403)
T TIGR01265 168 ----EKTVAIVVINPSNPCG-SVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFASIVPVLSLGGISKR 242 (403)
T ss_pred ----cCccEEEEecCCCCCC-CCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhccCCcEEEEeecccc
Confidence 2344444444456666 456788899999999999999999999998866552222222111111 23379999
Q ss_pred cc-CccceEEEEeC--HH-----HHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHh
Q 011777 323 IG-NGLPLGAVVTT--PE-----IANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQER 394 (477)
Q Consensus 323 lg-~G~pig~v~~~--~~-----~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~ 394 (477)
++ .|+|+||++++ ++ +.+.+.... ..+++.+.+++.++.++|+.. .+.+.++.++..+.-++.+.+..+.
T Consensus 243 ~~~pGlRiG~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~l~~~L~~ 320 (403)
T TIGR01265 243 WVVPGWRLGWIIIHDPHGIFRDTVLQGLKNLL-QRILGPATIVQGALPDILENT-PQEFFDGKISVLKSNAELCYEELKD 320 (403)
T ss_pred cCCCcceEEEEEEeCchhhhHHHHHHHHHHHh-hhhcCCChHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 76 59999999984 22 333333221 124567888998888888641 2333333333333233333333333
Q ss_pred CCCcee-eeccceeEEEEEeeCCCCCCccHHHHHHHHHHH-HHcCceeeccCCC--CCEEEEeCCCCCcHHHHHHHHHHH
Q 011777 395 HDIIGD-VRGRGLMVGMELVTDRKEKTPAKAETAVLFEKL-RELGVLVGKGGLH--GNVFRIKPPMCFTKDDADFLVDAL 470 (477)
Q Consensus 395 ~~~~~~-v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~~~--~~~iRi~p~~~~t~e~i~~~l~~l 470 (477)
++.+.. .+..|+++|+++..... +......++.+.+ .++||.+.++..+ .+++||+.. ..++++++++++|
T Consensus 321 ~~~~~~~~p~~g~f~~~~~~~~~~---~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~iRis~~--~~~~~l~~~l~~l 395 (403)
T TIGR01265 321 IPGLVCPKPEGAMYLMVKLELELF---PEIKDDVDFCEKLVREESVICLPGSAFGLPNWVRITIT--VPESMLEEACSRI 395 (403)
T ss_pred CCCceecCCCceeEEEEecccccc---CCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEec--CCHHHHHHHHHHH
Confidence 432322 24457888888743210 0000134566664 5789999998544 478999754 5689999999999
Q ss_pred HHHHhh
Q 011777 471 DYSMSK 476 (477)
Q Consensus 471 ~~~l~~ 476 (477)
.+++++
T Consensus 396 ~~~~~~ 401 (403)
T TIGR01265 396 KEFCER 401 (403)
T ss_pred HHHHHh
Confidence 998865
No 175
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=6.2e-23 Score=205.59 Aligned_cols=325 Identities=16% Similarity=0.133 Sum_probs=209.9
Q ss_pred CCEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCCC-CEEEEeCChHHHHHHHHH
Q 011777 95 GRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGNL-KVVYFVNSGTEANELAML 173 (477)
Q Consensus 95 G~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~-~~v~~~~sGseA~~~Al~ 173 (477)
++.++|+..|.. +++ .+|++++++.+.+.... ...|..+...+|++.+++++.... ++|++++|+++++..+++
T Consensus 25 ~~~~i~l~~~~~--~~~-~~~~~~~~~~~~~~~~~--~~~Y~~~~~~~lr~~ia~~~~~~~~~~I~~t~G~~~~i~~~~~ 99 (356)
T PRK04870 25 ATGMVKLDAMEN--PYR-LPAELRAELGERLAEVA--LNRYPDPRAAALKAALRAAMGVPAGADVLLGNGSDELIQLLAL 99 (356)
T ss_pred CCCceeCcCCCC--CCC-CCHHHHHHHHHHhhccc--cccCCCCCHHHHHHHHHHHhCcCCCCcEEEcCCHHHHHHHHHH
Confidence 467888766643 465 57899999998876421 123444445788888888886543 479999999999998887
Q ss_pred HHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCee
Q 011777 174 MARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVA 253 (477)
Q Consensus 174 ~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a 253 (477)
+.. .+++.|++.+++|.++...+... |...+.+|... .+..| .+++++.+. ..+++
T Consensus 100 ~~~--~~gd~vlv~~P~y~~~~~~~~~~-------------g~~~~~i~~~~--~~~~d----~~~l~~~~~---~~~~~ 155 (356)
T PRK04870 100 ACA--KPGATVLAPEPGFVMYRMSAKLA-------------GLEFVGVPLTA--DFTLD----LPAMLAAIA---EHRPA 155 (356)
T ss_pred Hhc--CCCCEEEECCCCHHHHHHHHHHc-------------CCEEEEecCCC--CCCCC----HHHHHHHhh---cCCCC
Confidence 553 35678999999998764432222 23333332211 11112 477777775 23456
Q ss_pred EEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCcceeeeccccc-CccceEEE
Q 011777 254 GFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIG-NGLPLGAV 332 (477)
Q Consensus 254 ~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg-~G~pig~v 332 (477)
+|++...++++|.+ .+.+.+++|.++| ++++|+||+|..|.... ........+...-+-+||| ++ .|+|+||+
T Consensus 156 ~v~l~~p~NPtG~~-~~~~~~~~i~~~~---~~~ii~De~y~~~~~~~-~~~~~~~~~~vi~~~S~SK-~~~~GlRiG~~ 229 (356)
T PRK04870 156 LVFLAYPNNPTGNL-FDDADVERIIEAA---PGLVVVDEAYQPFAGDS-WLPRLARFPNLLVMRTVSK-LGLAGLRLGYL 229 (356)
T ss_pred EEEEcCCCCCCCCC-CCHHHHHHHHHHC---CCEEEEECCchhhcCcc-hHHHHhhCCCEEEEecchh-hhhHHHhhhhh
Confidence 66655456777754 4677777777777 78999999998875322 1111122222223447999 77 49999999
Q ss_pred EeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhch-hhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEE
Q 011777 333 VTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDK-ERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGME 411 (477)
Q Consensus 333 ~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~ 411 (477)
++++++++.+.... ..++.+.+++.++..+++..+. ++..++++++.+++.+.|++ .+.+...+..|.++++.
T Consensus 230 i~~~~~i~~~~~~~--~~~~~~~~~q~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~~~~~~~~ 303 (356)
T PRK04870 230 AGHPAWIAELDKVR--PPYNVNVLTQATALFALEHVDVLDAQAAQLRAERTRLAAALAA----LPGVTVFPSAANFILVR 303 (356)
T ss_pred hCCHHHHHHHHHcc--CCCcCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHh----CCCcEECCCCCeEEEEE
Confidence 99999998886543 3456778888887777753211 22334444455555554443 33233344567777886
Q ss_pred EeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCC----CCEEEEeCCCCCcHHHHHHHHHHHHHHH
Q 011777 412 LVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLH----GNVFRIKPPMCFTKDDADFLVDALDYSM 474 (477)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~----~~~iRi~p~~~~t~e~i~~~l~~l~~~l 474 (477)
+. . ...+.+.|.++||.+.++..+ .+++||+.. +.+++++++++|++++
T Consensus 304 ~~--------~---~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~~---~~~~~~~l~~al~~~~ 356 (356)
T PRK04870 304 VP--------D---AAAVFDGLKTRGVLVKNLSGMHPLLANCLRVTVG---TPEENAQFLAALKAAL 356 (356)
T ss_pred CC--------C---HHHHHHHHHHCCEEEEECCCCCCCCCCeEEEeCC---CHHHHHHHHHHHHHhC
Confidence 52 1 346778899999999887433 468999654 7899999999998763
No 176
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=7.8e-23 Score=204.71 Aligned_cols=325 Identities=18% Similarity=0.148 Sum_probs=204.6
Q ss_pred CCEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHH
Q 011777 95 GRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLM 174 (477)
Q Consensus 95 G~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ 174 (477)
++.+|||..|.. .++ .+|.+.+++.+.+.... ..|+.+...+|++.+++++..+.++|++|+|+++|+..+++.
T Consensus 23 ~~~~i~l~~~~~--~~~-~~~~~~~a~~~~~~~~~---~~y~~~~~~~lr~aia~~~~~~~~~I~it~G~~~al~~~~~~ 96 (353)
T PRK05387 23 LAKLIKLNTNEN--PYP-PSPKVLEAIRAALGDDL---RLYPDPNADALRQAIAAYYGLDPEQVFVGNGSDEVLAHAFLA 96 (353)
T ss_pred ccceeeccCCCC--CCC-CCHHHHHHHHHHhhhhh---hcCCCCcHHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHH
Confidence 356899888775 344 37899999988766421 234444457889999998877778999999999999999986
Q ss_pred HHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeE
Q 011777 175 ARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAG 254 (477)
Q Consensus 175 ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~ 254 (477)
... +++.|++.+++|..+....... |.....+|.. ..+.-| +++++ + .....
T Consensus 97 l~~--~gd~vlv~~P~y~~~~~~~~~~-------------g~~~~~v~~~--~~~~~d----~~~l~---~----~~~~v 148 (353)
T PRK05387 97 FFN--HDRPLLFPDITYSFYPVYAGLY-------------GIPYEEIPLD--DDFSID----VEDYL---R----PNGGI 148 (353)
T ss_pred hcC--CCCEEEEeCCCHHHHHHHHHHc-------------CCEEEEeecC--CCCCCC----HHHHH---h----cCCEE
Confidence 643 5678999999986654332221 2222222211 111111 24443 2 12345
Q ss_pred EEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccc-cccCCCcceeeeccccc-CccceEEE
Q 011777 255 FIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGF-ETQGVIPDIVTMAKGIG-NGLPLGAV 332 (477)
Q Consensus 255 vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~-~~~gv~pDivt~sK~lg-~G~pig~v 332 (477)
++++| ++++|.+. +.+.+++|.+.+ +++++|+||+|..|+.. ..... +..+...-+-+|||.++ .|+|+||+
T Consensus 149 ~~~~P-~NPtG~~~-~~~~~~~l~~~~--~~~~livDe~y~~~~~~--~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~ 222 (353)
T PRK05387 149 IFPNP-NAPTGIAL-PLAEIERILAAN--PDSVVVIDEAYVDFGGE--SAIPLIDRYPNLLVVQTFSKSRSLAGLRVGFA 222 (353)
T ss_pred EEeCC-CCCCCCCC-CHHHHHHHHHhC--CCcEEEEeCcccccCCc--chHHHHhhCCCEEEEEehhHhhcchhhhceee
Confidence 56666 56666555 444455554433 29999999999877421 11111 22222222336999999 79999999
Q ss_pred EeCHHHHHhhcccccc-cCCCCcHHHHHHHHHHHHhhc-hhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEE
Q 011777 333 VTTPEIANVMAQKIQF-NTFGGNPVCSAGGLAVLRVID-KERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGM 410 (477)
Q Consensus 333 ~~~~~~~~~~~~~~~~-~t~~~~~~~~aaa~a~l~~l~-~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i 410 (477)
++++++++.+...... .+++.+.+++.++.++++..+ .++..+++.++.+++.+.|++ ++. ...+..|.++++
T Consensus 223 ~~~~~~~~~l~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~-~~~~~~~~~~~~ 297 (353)
T PRK05387 223 IGHPELIEALNRVKNSFNSYPLDRLAQAGAIAAIEDEAYFEETRAKVIATRERLVEELEA----LGF-EVLPSKANFVFA 297 (353)
T ss_pred ecCHHHHHHHHHhhccCCCCCcCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH----CCC-eECCCcCcEEEE
Confidence 9999998887654322 356778888888888875211 123344444455555555544 332 223345667666
Q ss_pred EEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCC--CCCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 411 ELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGL--HGNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~--~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
.+.. ....++.+.|.++||.+...+. ..+++||+.. +++++++++++|++++.+
T Consensus 298 ~~~~---------~~~~~~~~~l~~~gi~v~~~~~~~~~~~iRis~~---~~~~~~~~~~~L~~~~~~ 353 (353)
T PRK05387 298 RHPS---------HDAAELAAKLRERGIIVRHFNKPRIDQFLRITIG---TDEEMEALVDALKEILAK 353 (353)
T ss_pred ECCC---------CCHHHHHHHHHHCCEEEEECCCCCCCCeEEEEeC---CHHHHHHHHHHHHHHhhC
Confidence 5421 1245688889999999975432 2468999654 679999999999998753
No 177
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.92 E-value=2.1e-22 Score=209.23 Aligned_cols=340 Identities=14% Similarity=0.100 Sum_probs=203.8
Q ss_pred CHHHHHHHHHHHhhcc-----ccccccCChHHHHHHHHHHhhC--CCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEE
Q 011777 114 HPDVLNAIFEQSKLLQ-----HATTIYLHHAIADFAEALASKM--PGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIA 186 (477)
Q Consensus 114 ~p~v~~Av~~~l~~~~-----~~~~~~~~~~~~~l~~~La~~~--~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~ 186 (477)
+..+.+++.+.++... |....+..+.++.+++++.+.. +.+.++|++|+|+++|+..+++.... .+++.|++
T Consensus 90 P~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~-~~gD~Vlv 168 (481)
T PTZ00377 90 PADVVARAKEYLNAIGGGTGAYTDSAGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIG-DPSDGVMI 168 (481)
T ss_pred CHHHHHHHHHHHHhCCCcccCcCcccCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhcc-CCCCEEEE
Confidence 4577787776665421 1112233345555666665442 24567899999999999999986531 25678999
Q ss_pred EccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhcc--CCCCeeE-EEecccCCC
Q 011777 187 LRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFG--TSGKVAG-FIAETIQGV 263 (477)
Q Consensus 187 ~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~--~~~~~a~-vi~epi~~~ 263 (477)
..++|.++.......+. ..+.++......|.-| .+++++.++.. ...++++ ++++| +|+
T Consensus 169 ~~P~y~~y~~~~~~~g~-------------~~v~v~~~~~~~~~~d----~~~l~~~l~~~~~~~~~~k~l~l~~P-~NP 230 (481)
T PTZ00377 169 PIPQYPLYSAAITLLGG-------------KQVPYYLDEEKGWSLD----QEELEEAYEQAVRNGITPRALVVINP-GNP 230 (481)
T ss_pred CCCCchhHHHHHHHcCC-------------EEEEEEeccccCCCCC----HHHHHHHHHHHHhcCCCeeEEEEECC-CCC
Confidence 99999987554433322 2222222111122222 47787777521 1124554 55555 566
Q ss_pred CCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCC-CCCcccc-c-cCCCc------cee---eecccc-c-Cccce
Q 011777 264 GGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTG-SHYWGFE-T-QGVIP------DIV---TMAKGI-G-NGLPL 329 (477)
Q Consensus 264 ~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G-~~~~~~~-~-~gv~p------Div---t~sK~l-g-~G~pi 329 (477)
+| .+.+.+.+++|.++|++||++||+||+|..+.+.+ ..+..+. . .+..+ .++ +|||++ + .|||+
T Consensus 231 TG-~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRi 309 (481)
T PTZ00377 231 TG-QVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRG 309 (481)
T ss_pred CC-cCCCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCce
Confidence 66 56689999999999999999999999999876532 1121211 0 11111 233 689986 6 59999
Q ss_pred EEEEe---CHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhc--h---hhHHHHHHHHHHHH---HHHHHHHHHhCCCc
Q 011777 330 GAVVT---TPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVID--K---ERRQAHCADVGSHL---LGRLRTLQERHDII 398 (477)
Q Consensus 330 g~v~~---~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~--~---~~~~~~~~~~~~~l---~~~L~~l~~~~~~~ 398 (477)
||+++ ++++++.+.... ..+++.|.+++.++.++++... + +.+.+++++..+.+ ++.+.+...+++.+
T Consensus 310 G~~~~~~~p~~li~~l~~~~-~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g~ 388 (481)
T PTZ00377 310 GYFELTNIPPEVREQIYKLA-SINLCSNVVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIEGV 388 (481)
T ss_pred EEEEEeCCCHHHHHHHHHHh-heecCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 99986 899988887643 2345688999999998885311 0 12333333322222 22233333334434
Q ss_pred eeeeccc-eeEEEEEeeCCCCCCc-----cHHHHHHHHHHHHHcCceeeccCCCC-----CEEEEeCCCCCcHHHHHHHH
Q 011777 399 GDVRGRG-LMVGMELVTDRKEKTP-----AKAETAVLFEKLRELGVLVGKGGLHG-----NVFRIKPPMCFTKDDADFLV 467 (477)
Q Consensus 399 ~~v~g~g-~~~~i~~~~~~~~~~~-----~~~~~~~~~~~l~~~Gv~v~~~~~~~-----~~iRi~p~~~~t~e~i~~~l 467 (477)
....+.| +++|+++.-....... .......+...|.++||.+.||..++ +++|++.. .+++++++++
T Consensus 389 ~~~~p~gg~fl~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~~~~Rls~~--~~~e~l~~~l 466 (481)
T PTZ00377 389 SCQPVEGAMYAFPRIELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFGQKPGTYHFRITIL--PPEEQIEEMV 466 (481)
T ss_pred EeecCCeeEEEEeeccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCcccCCCCCCCEEEEEEC--CCHHHHHHHH
Confidence 4445554 5666555211000000 00011223566678899999986543 48999754 7789999999
Q ss_pred HHHHHHHhh
Q 011777 468 DALDYSMSK 476 (477)
Q Consensus 468 ~~l~~~l~~ 476 (477)
++|.+++++
T Consensus 467 ~rl~~~~~~ 475 (481)
T PTZ00377 467 KKIKEFHES 475 (481)
T ss_pred HHHHHHHHH
Confidence 999988764
No 178
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.92 E-value=2.1e-22 Score=202.01 Aligned_cols=327 Identities=15% Similarity=0.058 Sum_probs=201.9
Q ss_pred CEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHH
Q 011777 96 RRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMA 175 (477)
Q Consensus 96 ~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~a 175 (477)
...+||..+. ++++ .+|.+.+++.+.+.... .|..+...+|++.|+++++.+.++|++|+|++|++..+++..
T Consensus 22 ~~~i~l~~~~--n~~~-~~~~~~~a~~~~~~~~~----~Y~~~~~~~Lr~aia~~~~v~~~~I~it~G~~~~i~~~~~~l 94 (360)
T PRK07392 22 DAILDFSASI--NPLG-PPESVIAAIQSALSALR----HYPDPDYRELRLALAQHHQLPPEWILPGNGAAELLTWAGREL 94 (360)
T ss_pred ccEEEeCCcC--CCCC-CCHHHHHHHHHHHHHhh----cCCCcCHHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHHHh
Confidence 4678887654 3465 67899999888776422 244334567888888888777789999999999999888753
Q ss_pred HhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEE
Q 011777 176 RLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGF 255 (477)
Q Consensus 176 r~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~v 255 (477)
. +++.|++.+++|.++.......+ ...+.+|......+.. ...+++++.... ......+
T Consensus 95 -~--~g~~vlv~~P~y~~~~~~~~~~g-------------~~~~~v~~~~~~~~~~----~~~~~~~~~~~~-~~~~~~~ 153 (360)
T PRK07392 95 -A--QLRAVYLITPAFGDYRRALRAFG-------------ATVKELPLPLDQPSPG----LTLRLQTLPPQL-TPNDGLL 153 (360)
T ss_pred -C--CCCeEEEECCCcHHHHHHHHHcC-------------CeEEEEecccccCCcc----cccCHHHHHHhc-cCCCEEE
Confidence 2 34689999999988765544432 2222222111111100 012334333321 2233445
Q ss_pred EecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCcc-ccccCCCc---ceeeeccccc-CccceE
Q 011777 256 IAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWG-FETQGVIP---DIVTMAKGIG-NGLPLG 330 (477)
Q Consensus 256 i~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~-~~~~gv~p---Divt~sK~lg-~G~pig 330 (477)
+++| +|++|.+.. .++|.++++++++ +|+||+|.+|.+.+ .... ....+..+ -+-+|||.++ .|+|+|
T Consensus 154 l~nP-~NPTG~~~~----~~~l~~l~~~~~~-~IiDE~y~~~~~~~-~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG 226 (360)
T PRK07392 154 LNNP-HNPTGKLWS----REAILPLLEQFAL-VVVDEAFMDFLPPD-AEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLG 226 (360)
T ss_pred EeCC-CCCCCCCcC----HHHHHHHHHHCCE-EEEECchhhhccCc-cccchHHHhhcCCCEEEEEechhhhcCCchhee
Confidence 5555 666675554 4567888889986 56699999986655 2111 11111122 2347999999 899999
Q ss_pred EEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEE
Q 011777 331 AVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGM 410 (477)
Q Consensus 331 ~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i 410 (477)
|+++++++++.+.... ..++.+.+++.++.++|+. ..+.++.++..+..++.+.+..++++.+....+.|.++++
T Consensus 227 ~~v~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~---~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~fl~~ 301 (360)
T PRK07392 227 YAIAHPDRLQRWQQWR--DPWPVNGLAAAAAIAALAD---RDFQQQTWAWLPPAREALFQGLASLPGLTPLPSAANFLLV 301 (360)
T ss_pred eeeCCHHHHHHHHhhC--CCCCCCHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHHHHhCCCcEECCCCCCEEEE
Confidence 9999999988876533 3467889999998888863 3333333333333333343333334333334456778787
Q ss_pred EEeeCCCCCCccHHHHHHHHHHH-HHcCceeeccCCC----CCEEEEeCCCCCcHHHHHHHHHHHHHHHh
Q 011777 411 ELVTDRKEKTPAKAETAVLFEKL-RELGVLVGKGGLH----GNVFRIKPPMCFTKDDADFLVDALDYSMS 475 (477)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~~~----~~~iRi~p~~~~t~e~i~~~l~~l~~~l~ 475 (477)
++.. ...++.+.+ .++||.+.++..+ .+++||+.. +.++.+++.+.|+++++
T Consensus 302 ~~~~----------~~~~l~~~ll~~~gv~v~pg~~f~~~~~~~iRi~~~---~~~~~~~l~~al~~~~~ 358 (360)
T PRK07392 302 QSQG----------SALQLQEKLLQQHRILIRDCLSFPELGDRYFRVAVR---TEAENQRLLEALAAILA 358 (360)
T ss_pred EcCC----------CHHHHHHHHHhhCCEEEEeCCCCCCCCCCEEEEEeC---CHHHHHHHHHHHHHHhh
Confidence 6521 134566665 5679999988543 368999643 35556677777766553
No 179
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.92 E-value=5.1e-23 Score=203.90 Aligned_cols=278 Identities=22% Similarity=0.216 Sum_probs=190.9
Q ss_pred cCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCC
Q 011777 135 YLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQG 214 (477)
Q Consensus 135 ~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~ 214 (477)
|+++...++++.++++++.+.+.+++++|+++++..+.++. +++ +|++.+++|+.+.......
T Consensus 44 y~~~~~~~lr~~la~~~~~~~~~i~~t~G~~~~i~~~~~~l---~~g-~vl~~~p~y~~~~~~~~~~------------- 106 (330)
T TIGR01140 44 YPDPEYDELRAAAAAYYGLPAASVLPVNGAQEAIYLLPRLL---APG-RVLVLAPTYSEYARAWRAA------------- 106 (330)
T ss_pred CCCccHHHHHHHHHHHhCCChhhEEECCCHHHHHHHHHHHh---CCC-eEEEeCCCcHHHHHHHHHc-------------
Confidence 44444588999999988766789999999999999865542 234 6888999998764433211
Q ss_pred CeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcc
Q 011777 215 EIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQ 294 (477)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~ 294 (477)
|+....+++ .+++++.++ +..+++++.| ++++| ..++.+.+++|.++|++||+++|+||+|
T Consensus 107 g~~~~~~~d-------------~~~l~~~~~----~~~~v~i~~p-~NPtG-~~~~~~~~~~l~~~a~~~~~~ii~De~y 167 (330)
T TIGR01140 107 GHEVVELPD-------------LDRLPAALE----ELDVLVLCNP-NNPTG-RLIPPETLLALAARLRARGGWLVVDEAF 167 (330)
T ss_pred CCEEEEeCC-------------HHHHHhhcc----cCCEEEEeCC-CCCCC-CCCCHHHHHHHHHHhHhcCCEEEEECcc
Confidence 333333331 467777664 1224556666 55666 4568899999999999999999999999
Q ss_pred cCccCCCCCCccccccCCCccee---eeccccc-CccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhch
Q 011777 295 TGFGRTGSHYWGFETQGVIPDIV---TMAKGIG-NGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDK 370 (477)
Q Consensus 295 ~gfgr~G~~~~~~~~~gv~pDiv---t~sK~lg-~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~ 370 (477)
.+|.... .+... .+..++++ +|||.+| .|+|+||+++++++++.+.... ..++.++++++++.+.++ +
T Consensus 168 ~~~~~~~-~~~~~--~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~--~~~~~s~~~q~~~~~~l~---~ 239 (330)
T TIGR01140 168 IDFTPDA-SLAPQ--AARFPGLVVLRSLTKFFGLAGLRLGFVVAHPALLARLREAL--GPWTVNGPARAAGRAALA---D 239 (330)
T ss_pred cccCCcc-chhhH--hccCCCEEEEEecchhhcCchhhhhheeCCHHHHHHHHhcC--CCCCchHHHHHHHHHHHh---c
Confidence 9885432 22221 11122333 7999999 6999999999999998887543 356678888888877775 3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCC----
Q 011777 371 ERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLH---- 446 (477)
Q Consensus 371 ~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~---- 446 (477)
+++.++.++..+..++.+.+..++++.+....+.|.|+|+.+.. ..++.+.|+++||.+.++..+
T Consensus 240 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~f~~~~~~~-----------~~~l~~~l~~~gi~v~pg~~f~~~~ 308 (330)
T TIGR01140 240 TAWQAATRARLAAERARLAALLARLGGLEVVGGTALFLLVRTPD-----------AAALHEALARRGILIRDFDNFPGLD 308 (330)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCCCceECCCCCeEEEEEcCC-----------HHHHHHHHHHCCEEEEECCCCCCCC
Confidence 44545555555666666655555565444445567888887621 347889999999999998543
Q ss_pred CCEEEEeCCCCCcHHHHHHHHHHH
Q 011777 447 GNVFRIKPPMCFTKDDADFLVDAL 470 (477)
Q Consensus 447 ~~~iRi~p~~~~t~e~i~~~l~~l 470 (477)
.++|||+++ ...++ ++++.+|
T Consensus 309 ~~~iRi~~~--~~~~~-~~~~~~l 329 (330)
T TIGR01140 309 PRYLRFALP--TDEEN-DRLEEAL 329 (330)
T ss_pred CCEEEEEec--CHHHH-HHHHHhh
Confidence 368999654 34444 7777765
No 180
>PRK03321 putative aminotransferase; Provisional
Probab=99.92 E-value=6.1e-23 Score=205.37 Aligned_cols=323 Identities=17% Similarity=0.118 Sum_probs=209.2
Q ss_pred EEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHH
Q 011777 97 RYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMAR 176 (477)
Q Consensus 97 ~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar 176 (477)
.++|+..+.. .+| .+|.+.+++.+.+.... .|......++++.++++++.+.++|++++|.++++..++....
T Consensus 23 ~~i~l~~~~~--~~~-~~~~~~~a~~~~~~~~~----~y~~~g~~~lr~~ia~~~~~~~~~I~~~~G~~~~l~~~~~~~~ 95 (352)
T PRK03321 23 GAIKLSSNET--PFG-PLPSVRAAIARAAAGVN----RYPDMGAVELRAALAEHLGVPPEHVAVGCGSVALCQQLVQATA 95 (352)
T ss_pred cceeccCCCC--CCC-CCHHHHHHHHHHHHhcC----cCCCCcHHHHHHHHHHHhCcCHHHEEECCCHHHHHHHHHHHhc
Confidence 4788877664 355 46789999987765432 2444567788899999887666789999999998888776542
Q ss_pred hccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEE
Q 011777 177 LSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFI 256 (477)
Q Consensus 177 ~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi 256 (477)
.+++.|++..++|..+...... .|...+.++.... .+.| ++++++.++ +++++|+
T Consensus 96 --~~gd~Vli~~p~y~~~~~~~~~-------------~g~~~~~v~~~~~--~~~~----~~~l~~~~~----~~~~~v~ 150 (352)
T PRK03321 96 --GPGDEVIFAWRSFEAYPILVQV-------------AGATPVQVPLTPD--HTHD----LDAMAAAIT----DRTRLIF 150 (352)
T ss_pred --CCCCEEEeCCCCHHHHHHHHHH-------------cCCEEEEccCCCC--CCCC----HHHHHHhhc----cCCCEEE
Confidence 3567888887777543221111 1222233222111 1111 467777765 2455666
Q ss_pred ecccCCCCCeeeCCchhHHHHHHHHHH--hCcEEEEcCcccCccCCCCCCccccccCCCccee---eeccccc-CccceE
Q 011777 257 AETIQGVGGAVELAPGYLKLVYDIVRK--AGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIV---TMAKGIG-NGLPLG 330 (477)
Q Consensus 257 ~epi~~~~G~~~~~~~~l~~l~~l~~~--~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDiv---t~sK~lg-~G~pig 330 (477)
++..++++|.+.+ .+++.++|++ +++++|+||+|.+|.+.+....++......++++ +|||.+| .|+|+|
T Consensus 151 l~~p~NPtG~~~~----~~~l~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG 226 (352)
T PRK03321 151 VCNPNNPTGTVVT----PAELARFLDAVPADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVG 226 (352)
T ss_pred EeCCCCCcCCCcC----HHHHHHHHHhCCCCeEEEEechHHHhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhh
Confidence 6556677786665 4555566655 6999999999998866542112222222234444 6899999 699999
Q ss_pred EEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEE
Q 011777 331 AVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGM 410 (477)
Q Consensus 331 ~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i 410 (477)
|+++++++++.+... ..+++.+++++.++.++|+. .+.+.++.++..+. ++.+.+...+.+.. ..+..|.++++
T Consensus 227 ~~v~~~~~~~~~~~~--~~~~~~s~~~q~~a~~~l~~--~~~~~~~~~~~~~~-r~~~~~~L~~~~~~-~~~~~g~~i~i 300 (352)
T PRK03321 227 YAVGHPEVIAALRKV--AVPFSVNSLAQAAAIASLAA--EDELLERVDAVVAE-RDRVRAALRAAGWT-VPPSQANFVWL 300 (352)
T ss_pred hhcCCHHHHHHHHHh--cCCCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHH-HHHHHHHHHHCCCc-cCCCCCCEEEE
Confidence 999999999988754 35677889999988888863 23343333333222 12233333333322 23345888888
Q ss_pred EEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 411 ELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
.+.. ....+.+.|.++||.+.+.+ .+.|||++ .+.+++++++++|++++..
T Consensus 301 ~l~~----------~~~~~~~~l~~~gI~v~~~~--~~~iRi~~---~~~~~~~~~~~al~~~~~~ 351 (352)
T PRK03321 301 PLGE----------RTADFAAAAAEAGVVVRPFA--GEGVRVTI---GAPEENDAFLRAARAWRAG 351 (352)
T ss_pred eCCC----------CHHHHHHHHHHCCEEEEccC--CCcEEEee---CCHHHHHHHHHHHHHHhcc
Confidence 7621 14568888999999998743 45699963 5899999999999998764
No 181
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.92 E-value=1e-22 Score=204.61 Aligned_cols=341 Identities=16% Similarity=0.119 Sum_probs=209.5
Q ss_pred EEEeecCCcccccCCCCCHHHHHHHHHHHh--hccccccccCCh-HHHHHHHHHHhhCC------CCCC-EEEEeCChHH
Q 011777 97 RYLDAFAGIVTVSCGHCHPDVLNAIFEQSK--LLQHATTIYLHH-AIADFAEALASKMP------GNLK-VVYFVNSGTE 166 (477)
Q Consensus 97 ~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~--~~~~~~~~~~~~-~~~~l~~~La~~~~------~~~~-~v~~~~sGse 166 (477)
+.|||.+|.. ..+++||.+.+++.+..+ ........|... ...+|.+.+++++. .+.+ .+++++|..+
T Consensus 2 ~~I~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~ 79 (363)
T PF00155_consen 2 DVINLGSNAP--LLLSQNPPPPAAIKAAIRGAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQA 79 (363)
T ss_dssp TEEESSSSST--SSTTSSHHHHHHHHHHHHHHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHH
T ss_pred CEEEEECCCC--CCcccccchHHHHHHHHHHhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEeccccc
Confidence 4688877765 344456666666655443 111222234433 36778888887765 4456 6777777666
Q ss_pred HHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhc
Q 011777 167 ANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDF 246 (477)
Q Consensus 167 A~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~ 246 (477)
++..++.+.+ ..+++.|++.+++|.+........+ ...++++......+..| .++|++.++.
T Consensus 80 ~~~~~~~~~~-~~~~~~vlv~~P~y~~~~~~~~~~g-------------~~~~~~~~~~~~~~~~d----~~~l~~~l~~ 141 (363)
T PF00155_consen 80 ALFLLLRLLK-INPGDTVLVPDPCYPSYIEAARLLG-------------AEVIPVPLDSENDFHLD----PEALEEALDE 141 (363)
T ss_dssp HHHHHHHHHH-SSTTSEEEEEESSSTHHHHHHHHTT-------------SEEEEEEEEETTTTEET----HHHHHHHHHT
T ss_pred chhhhhhccc-ccccccceecCCccccccccccccC-------------ceeeecccccccccccc----cccccccccc
Confidence 6666665543 3467789999999987755443332 22222221100111112 4788888874
Q ss_pred cCCC--CeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCcc-ccccCCCcc---eeeec
Q 011777 247 GTSG--KVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWG-FETQGVIPD---IVTMA 320 (477)
Q Consensus 247 ~~~~--~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~-~~~~gv~pD---ivt~s 320 (477)
...+ ++.+|++...++++|. .++.+.+++|.++|++||+++|+||+|.++......+.. .....-.++ +-++|
T Consensus 142 ~~~~~~~~~~v~~~~p~nPtG~-~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~S 220 (363)
T PF00155_consen 142 LPSKGPRPKAVLICNPNNPTGS-VLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLS 220 (363)
T ss_dssp SHTTTETEEEEEEESSBTTTTB-B--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEEST
T ss_pred ccccccccceeeeccccccccc-ccccccccchhhhhcccccceeeeeceeccccCCCccCcccccccccccceeeeecc
Confidence 3222 3466666666777774 568888999999999999999999999988654311211 111122222 33689
Q ss_pred cccc-CccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhch-hhHHHHHHHHHHHHHHHHHHHHHhCCCc
Q 011777 321 KGIG-NGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDK-ERRQAHCADVGSHLLGRLRTLQERHDII 398 (477)
Q Consensus 321 K~lg-~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~ 398 (477)
|.+| .|+|+||+++++++++.+......+.. +.+.+.++.+.+..... +++.++.++..+..++.+.+..++.+..
T Consensus 221 K~~g~~GlRvG~i~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~ 298 (363)
T PF00155_consen 221 KSFGLPGLRVGYIVAPPELIERLRRFQRSGLS--SSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEIGIT 298 (363)
T ss_dssp TTTTSGGGTEEEEEEEHHHHHHHHHHHHHTTS--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSE
T ss_pred ccccccccccccccchhhhhhhhhhccccccc--cchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhhhh
Confidence 9999 599999999999999988765433333 66777776666654321 1133333333333333333433334433
Q ss_pred eeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHc-CceeeccCCC--CCEEEEeCCCCCcHHHHHHHHHHH
Q 011777 399 GDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLREL-GVLVGKGGLH--GNVFRIKPPMCFTKDDADFLVDAL 470 (477)
Q Consensus 399 ~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~~~--~~~iRi~p~~~~t~e~i~~~l~~l 470 (477)
......|.++++.+.. ....++.+.|+++ ||.+.|+..+ .+++|++. ..++++++++++++|
T Consensus 299 ~~~~~~~~~~~~~~~~---------~~~~~l~~~L~~~~gi~v~pg~~~~~~~~iRi~~-a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 299 VLPPEAGFFLWVRLDP---------NDAEELAQELLEEYGILVRPGSYFGVPGYIRISL-ASHSEEDLEEALERL 363 (363)
T ss_dssp EEHHSBSSEEEEEESH---------HHHHHHHHHHHHHHTEEEEEGGGGTSTTEEEEEG-GCSCHHHHHHHHHHH
T ss_pred eeeccCccEEEEEccc---------chHHHHHHHHHHhCCEEEEecCCCCCCCEEEEEe-ccCCHHHHHHHHhhC
Confidence 3333356777776632 1456788889988 9999987432 57999987 578999999999986
No 182
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.92 E-value=9.3e-23 Score=208.00 Aligned_cols=343 Identities=14% Similarity=0.070 Sum_probs=200.1
Q ss_pred CCEEEeecCCcccccCCCCCHHHHHHHHHHHhhcc-------ccccccCChHHHHHHHHHHhhC--CCCCCEEEEeCChH
Q 011777 95 GRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQ-------HATTIYLHHAIADFAEALASKM--PGNLKVVYFVNSGT 165 (477)
Q Consensus 95 G~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~-------~~~~~~~~~~~~~l~~~La~~~--~~~~~~v~~~~sGs 165 (477)
|..++|+..|... ++ .+|.+.+++.+.+.... +....+..+.+..+++.+.+.. +.+.++|++|+|++
T Consensus 33 ~~~~i~l~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~ 109 (409)
T PRK07590 33 EAKIIRLGIGDVT--QP-LPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDISADEIFISDGAK 109 (409)
T ss_pred CCceEEecCcCCC--CC-CCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCChhhEEECCCHH
Confidence 5567888777643 33 46889999988876531 1111122233444444443332 45668999999999
Q ss_pred HHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCe--eeecCCCCcCCCCCCCHHHHHHHHHHH
Q 011777 166 EANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEI--HHVVNPDPYHGSFGSDAARYAQDLQDH 243 (477)
Q Consensus 166 eA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~le~~ 243 (477)
+++...+.+ ..+++.|++.+++|.++.......+..... ...|. ..+++|......+. .+++
T Consensus 110 ~al~~l~~~---~~~gd~V~v~~P~Y~~~~~~~~~~g~~~~~----~~~~~~~~~~~v~~~~~~~~~-------~d~~-- 173 (409)
T PRK07590 110 CDTGNILDI---FGPDNTIAVTDPVYPVYVDTNVMAGRTGEA----NEDGRYSGIVYLPCTAENNFV-------PELP-- 173 (409)
T ss_pred HHHHHHHHh---cCCCCEEEEeCCCCcchHHHHHHcCCcccc----cccccccceeEeecccccCCc-------ccCc--
Confidence 999875432 346788999999999876544443321000 00000 01111111011111 1111
Q ss_pred HhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCcccc-ccC---CCcceeee
Q 011777 244 IDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFE-TQG---VIPDIVTM 319 (477)
Q Consensus 244 i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~-~~g---v~pDivt~ 319 (477)
..++++|++...+|++| .+++.+.+++|.++|++||++||+||+|..|-..+.....+. ..+ ....+-||
T Consensus 174 -----~~~~k~i~l~nP~NPTG-~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~Sf 247 (409)
T PRK07590 174 -----EEKVDIIYLCFPNNPTG-TVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRSF 247 (409)
T ss_pred -----ccCceEEEEeCCCCCcC-CcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCcccceEEEecC
Confidence 12445554433456666 566899999999999999999999999998855441111111 111 12234479
Q ss_pred ccccc-CccceEEEEeCHHHHHhhc-----------ccccccCC-CCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHH
Q 011777 320 AKGIG-NGLPLGAVVTTPEIANVMA-----------QKIQFNTF-GGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLG 386 (477)
Q Consensus 320 sK~lg-~G~pig~v~~~~~~~~~~~-----------~~~~~~t~-~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~ 386 (477)
||.++ .|+|+||+++++++++.+. ......++ +.+.+++.++.++++.- .+.+.+++++..+..++
T Consensus 248 SK~~~~pGlRiG~~i~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~-~~~~~~~~~~~~~~~r~ 326 (409)
T PRK07590 248 SKTAGFTGTRCAYTVVPKELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPE-GKAQIKELIDYYMENAK 326 (409)
T ss_pred ccccCCcCceeEEEEcCHHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCC-cHHHHHHHHHHHHHHHH
Confidence 99998 7999999999999886321 11122233 46778888887777521 12233333333222333
Q ss_pred HHHHHHHhCCCceeeec-cceeEEEEEeeCCCCCCccHHHHHHHHHHHH-HcCceeeccCCC----CCEEEEeCCCCCcH
Q 011777 387 RLRTLQERHDIIGDVRG-RGLMVGMELVTDRKEKTPAKAETAVLFEKLR-ELGVLVGKGGLH----GNVFRIKPPMCFTK 460 (477)
Q Consensus 387 ~L~~l~~~~~~~~~v~g-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~----~~~iRi~p~~~~t~ 460 (477)
.+.+....++ +....+ .|+++|+++... ....++.+.++ ++||++.|+..+ .+++||+ +..++
T Consensus 327 ~l~~~L~~~~-~~~~~~~g~~f~wi~~~~~--------~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~--~~~~~ 395 (409)
T PRK07590 327 IIREGLESAG-FEVYGGVNAPYIWVKTPDG--------MSSWDFFDKLLQEANVVGTPGSGFGPSGEGYFRLS--AFGSR 395 (409)
T ss_pred HHHHHHHhcC-CceecCCcceEEEEECCCC--------CCHHHHHHHHHHHCCEEEeChhHhCCCCCCEEEEE--ccCCH
Confidence 3333333333 222333 466888887321 11345666665 579999987433 3689996 45689
Q ss_pred HHHHHHHHHHHHHH
Q 011777 461 DDADFLVDALDYSM 474 (477)
Q Consensus 461 e~i~~~l~~l~~~l 474 (477)
+++++++++|.+++
T Consensus 396 ~~l~~~l~rl~~~~ 409 (409)
T PRK07590 396 ENVLEAMERIKKAL 409 (409)
T ss_pred HHHHHHHHHHHhhC
Confidence 99999999998753
No 183
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=1.2e-22 Score=201.35 Aligned_cols=321 Identities=17% Similarity=0.165 Sum_probs=206.3
Q ss_pred eeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCC---CCCCEEEE
Q 011777 84 EGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMP---GNLKVVYF 160 (477)
Q Consensus 84 ~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~---~~~~~v~~ 160 (477)
+++|.+-+...|+..+|+..|.. .+| .+|.+++++.+.+.... ...|+.+...+|++.+++++. .+.++|++
T Consensus 7 ~~~~~~~~~~~~~~~i~l~~~~~--~~~-~p~~~~~~~~~~~~~~~--~~~Y~~~~~~~Lr~aia~~~~~~~~~~~~i~i 81 (335)
T PRK14808 7 IAKRAYPYETEKRDRTYLALNEN--PFP-FPEDLVDEVFRRLNSDT--LRIYYDSPDEELIEKILSYLDTDFLSKNNVSV 81 (335)
T ss_pred hhccCcCCCCCCCceeEecCCCC--CCC-CCHHHHHHHHHHhhhhh--hhcCCCCChHHHHHHHHHHhCCCCCCcceEEE
Confidence 45666666778899999887654 566 47889999988765321 122444456778888888775 45789999
Q ss_pred eCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHH
Q 011777 161 VNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDL 240 (477)
Q Consensus 161 ~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 240 (477)
|+|++|++..+++.. +.|++.+++|.++...+...+ ...+.+|... .+.. ++.
T Consensus 82 t~Ga~~~i~~~~~~~------d~v~v~~P~y~~~~~~~~~~g-------------~~~~~v~~~~--~~~~------~~~ 134 (335)
T PRK14808 82 GNGADEIIYVMMLMF------DRSVFFPPTYSCYRIFAKAVG-------------AKFLEVPLTK--DLRI------PEV 134 (335)
T ss_pred cCCHHHHHHHHHHHh------CcEEECCCCHHHHHHHHHHcC-------------CeEEEecCCC--cCCC------Chh
Confidence 999999999998744 468999999988766554443 2222222211 1111 111
Q ss_pred HHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCcc-ccccCCCcceeee
Q 011777 241 QDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWG-FETQGVIPDIVTM 319 (477)
Q Consensus 241 e~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~-~~~~gv~pDivt~ 319 (477)
.+. .....++++| +|++|.+. +++.+++| + +++++||+||+|..|. +..+.. .+......-+-+|
T Consensus 135 --~~~----~~~~i~i~nP-~NPTG~~~-s~~~l~~l---~-~~~~~ii~DE~Y~~f~--~~~~~~~~~~~~~vi~~~S~ 200 (335)
T PRK14808 135 --NVG----EGDVVFIPNP-NNPTGHVF-EREEIERI---L-KTGAFVALDEAYYEFH--GESYVDLLKKYENLAVIRTF 200 (335)
T ss_pred --Hcc----CCCEEEEeCC-CCCCCCCc-CHHHHHHH---H-hcCCEEEEECchhhhc--CCchHHHHHhCCCEEEEEec
Confidence 111 2223444444 55556444 55555544 4 5899999999999884 212222 1222222334479
Q ss_pred ccccc-CccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhch-hhHHHHHHHHHHHHHHHHHHHHHhCCC
Q 011777 320 AKGIG-NGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDK-ERRQAHCADVGSHLLGRLRTLQERHDI 397 (477)
Q Consensus 320 sK~lg-~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~ 397 (477)
||.++ .|+|+||+++++++++.+.... .+++.+.+++.++.++++..+. ++..+.+.+..+++.+.|+ +.+
T Consensus 201 SK~~~l~GlRvG~~v~~~~~~~~l~~~~--~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~----~~g- 273 (335)
T PRK14808 201 SKAFSLAAQRIGYVVSSEKFIDAYNRVR--LPFNVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALR----EMG- 273 (335)
T ss_pred hhhccCcccceEEEEeCHHHHHHHHHhc--CCCCCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHH----HCC-
Confidence 99999 7999999999999998886544 3467788888888888863211 1222333333344444433 334
Q ss_pred ceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHH
Q 011777 398 IGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADFLVDALDY 472 (477)
Q Consensus 398 ~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~ 472 (477)
+....+.|.|+|+.+... ...++.+.|.++||++... .+++||+ ..++++.+++++.|++
T Consensus 274 ~~~~~~~g~f~~~~l~~~---------~~~~~~~~l~~~Gi~V~~~---~~~~Ris---i~~~~~~~~~~~~l~~ 333 (335)
T PRK14808 274 YRITDSRGNFVFIFMEKE---------EKERLLEHLRAKNIAVRSF---REGVRIT---IGKREENDMILKELEV 333 (335)
T ss_pred CEECCCCCeEEEEeCCCc---------cHHHHHHHHHHCCeEEEEC---CCCeEEe---cCCHHHHHHHHHHHHh
Confidence 333456788988876311 1356888999999999853 4679995 4568999999999875
No 184
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.92 E-value=6.3e-22 Score=201.36 Aligned_cols=333 Identities=16% Similarity=0.089 Sum_probs=212.1
Q ss_pred CCEEEeecCCcccccCCCCCHHHHHHHHHHHhhcccccccc-------CChHHHHHHHHHHhhCCCC-CCEEEEeCChHH
Q 011777 95 GRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIY-------LHHAIADFAEALASKMPGN-LKVVYFVNSGTE 166 (477)
Q Consensus 95 G~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~-------~~~~~~~l~~~La~~~~~~-~~~v~~~~sGse 166 (477)
+..|||..+. |..++.|.+++.+.+.......... ..+...++++.++++++.. .++|+|++|+|+
T Consensus 16 ~~iyld~a~~------~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~t~g~t~ 89 (398)
T TIGR03392 16 GTVYLDSAAT------ALKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAPDAENIVWTRGTTE 89 (398)
T ss_pred CeEEeeCccc------cCCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChHH
Confidence 5689996643 3467899999988775421111111 1234567889999998863 678999999999
Q ss_pred HHHHHHHHHHh--ccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHH
Q 011777 167 ANELAMLMARL--STGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHI 244 (477)
Q Consensus 167 A~~~Al~~ar~--~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i 244 (477)
++..++..... ..++++||+.++.|++.......... ..|+..+.+|.......+ .+++++++
T Consensus 90 ~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~---------~~g~~v~~v~~~~~~~~~------~~~l~~~i 154 (398)
T TIGR03392 90 SINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQ---------QTGAKVVKLPIGADLLPD------IRQLPELL 154 (398)
T ss_pred HHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHH---------HcCcEEEEEecCCCCCcC------HHHHHHHh
Confidence 99999876521 23567888888888764221111100 012222222221111111 47788777
Q ss_pred hccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCcceeeec--cc
Q 011777 245 DFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMA--KG 322 (477)
Q Consensus 245 ~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~s--K~ 322 (477)
. +++++|++..+++++|.+.+ +++|.++|++||+++|+|++|+ ++.. ..+.....+|+.++| |.
T Consensus 155 ~----~~t~lv~i~~~~n~tG~~~~----~~~i~~~~~~~~~~~ivD~a~~-~~~~-----~~~~~~~~~d~~~~s~~K~ 220 (398)
T TIGR03392 155 T----PRTRILALGQMSNVTGGCPD----LARAITLAHQYGAVVVVDGAQG-VVHG-----PPDVQALDIDFYAFSGHKL 220 (398)
T ss_pred c----cCceEEEEECccccccccCC----HHHHHHHHHHcCCEEEEEhhhh-cCCC-----CCChhhcCCCEEEEecccc
Confidence 5 35677888778888888877 8999999999999999999996 3321 122223457888888 96
Q ss_pred ccCccceEEEEeCHHHHHhhccccccc---------------------CCCCcHHHHHHHHHHHHhhchh---hHHHHHH
Q 011777 323 IGNGLPLGAVVTTPEIANVMAQKIQFN---------------------TFGGNPVCSAGGLAVLRVIDKE---RRQAHCA 378 (477)
Q Consensus 323 lg~G~pig~v~~~~~~~~~~~~~~~~~---------------------t~~~~~~~~aaa~a~l~~l~~~---~~~~~~~ 378 (477)
+|. .++|++++++++++.+.....++ .-+.|..+.++..++++.+.+. +..++..
T Consensus 221 ~gp-~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~ 299 (398)
T TIGR03392 221 YGP-TGIGVLYGKTELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSV 299 (398)
T ss_pred cCC-CceEEEEEcHHHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 653 34899999999887764321110 0123455667777777776543 3344445
Q ss_pred HHHHHHHHHHHHHHHhCCCceee-eccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCC----------CC
Q 011777 379 DVGSHLLGRLRTLQERHDIIGDV-RGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGL----------HG 447 (477)
Q Consensus 379 ~~~~~l~~~L~~l~~~~~~~~~v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~----------~~ 447 (477)
++.+++++.|.+ .+.+.-. ...+.++.+.+.. ....++.+.|.++||.+..+.. ..
T Consensus 300 ~l~~~l~~~l~~----l~g~~~~~~~~~~i~~~~~~~---------~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~g~~ 366 (398)
T TIGR03392 300 SLADLAEERLAQ----LPGFRSFRCPGSSLLAFDFAG---------VHHSDLAALLAESGIALRAGQHCAQPLMAALGVS 366 (398)
T ss_pred HHHHHHHHHHhc----CCCeEEeCCCCCcEEEEEeCC---------cCHHHHHHHHHhCCEEEecCccchHHHHHHhCCC
Confidence 555555555443 3222111 1223455555421 1135678888999999987631 14
Q ss_pred CEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 448 NVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 448 ~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
+++|++++..+|++|++++++.|++++++
T Consensus 367 ~~iRvS~~~~~t~~ei~~l~~~l~~~~~~ 395 (398)
T TIGR03392 367 GTLRASFAPYNTQQDVDALVDAVGAALEL 395 (398)
T ss_pred CEEEEEeeccCCHHHHHHHHHHHHHHHHH
Confidence 68999999999999999999999998765
No 185
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.92 E-value=1.1e-22 Score=202.08 Aligned_cols=307 Identities=16% Similarity=0.082 Sum_probs=200.7
Q ss_pred CEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCC-CCEEEEeCChHHHHHHHHHH
Q 011777 96 RRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGN-LKVVYFVNSGTEANELAMLM 174 (477)
Q Consensus 96 ~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~-~~~v~~~~sGseA~~~Al~~ 174 (477)
..++||.++. +++|.+.+.+.. ..+ ..|+.+. .+|++.|+++++.. .++|+++||++|++.....+
T Consensus 24 ~~~i~ls~Ne--np~~~~~~~~~~---~~~-------~~Yp~~~-~~L~~~ia~~~~~~~~~~I~i~~Gs~e~i~~l~~~ 90 (339)
T PRK06959 24 DAWLDLSTGI--NPHGYPVPPVPA---DAW-------RRLPEDD-DGLAACAARYYGAPDAAHVLPVAGSQAAIRALPAL 90 (339)
T ss_pred hhhceeccCC--CCCCCCCCCCCH---HHH-------HhCCCch-HHHHHHHHHHhCCCCcccEEECcCHHHHHHHHHHh
Confidence 4679998888 578866333321 112 1356555 89999999998765 47999999999999865442
Q ss_pred HHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeE
Q 011777 175 ARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAG 254 (477)
Q Consensus 175 ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~ 254 (477)
..+ +++++.+++|.++...+... |...++++. + . +.+++ ....+
T Consensus 91 ---~~~-g~v~v~~P~y~~y~~~~~~~-------------g~~~~~v~~------~--~----~~~~~-------~~~~v 134 (339)
T PRK06959 91 ---LPR-GRVGIAPLAYSEYAPAFARH-------------GHRVVPLDE------A--A----DTLPA-------ALTHL 134 (339)
T ss_pred ---cCC-CeEEEcCCCcHHHHHHHHHC-------------CCEEEeecc------c--c----hhccc-------cCCEE
Confidence 223 35888999998875554333 222222221 0 0 11111 11257
Q ss_pred EEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCcceeeeccccc-CccceEEEE
Q 011777 255 FIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIG-NGLPLGAVV 333 (477)
Q Consensus 255 vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg-~G~pig~v~ 333 (477)
++++|. |++| ...+.+.++++.+.|+++++++|+||+|..|.... ............-+-||||.+| .|+|+||++
T Consensus 135 ~l~nPn-NPTG-~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~~-s~~~~~~~~~vi~l~SfSK~~gl~GlRiGy~v 211 (339)
T PRK06959 135 IVVNPN-NPTA-ERLPAARLLRWHAQLAARGGTLIVDEAFADTLPAA-SLAAHTDRPGLVVLRSVGKFFGLAGVRAGFVL 211 (339)
T ss_pred EEeCCC-CCCC-CCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCcc-cchhccCCCCEEEEecChhhcCCcchheEEEe
Confidence 888885 5566 45578889999999999999999999999885322 2222211111122337999999 799999999
Q ss_pred eCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhc-hhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEE
Q 011777 334 TTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVID-KERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMEL 412 (477)
Q Consensus 334 ~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~-~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~ 412 (477)
+++++++.+.... ..|+.|.+++.++.++|+..+ .+...+.+++.++++.+.|++ ++.. +...++++|+.+
T Consensus 212 ~~~~li~~l~~~~--~~~~vs~~~q~a~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~----~g~~--~~~~~~f~~~~~ 283 (339)
T PRK06959 212 AAPALLAALRDAL--GAWTVSGPARHAVRAAFADAAWQAAMRERLAADGARLAALLRA----HGFA--VHATPLFSWTDD 283 (339)
T ss_pred cCHHHHHHHHHhc--CCCCCcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH----CCCC--ccCcceEEEEeC
Confidence 9999999887643 456678899999988886311 122334444444555555444 3321 223466777764
Q ss_pred eeCCCCCCccHHHHHHHHHHHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 413 VTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
. ...++.+.|.++||++...+ ..+++||+ ...+++|+++++++|+++++.
T Consensus 284 ~-----------~~~~l~~~l~~~GI~vr~~~-~~~~lRis--i~~~~~e~~~l~~al~~~~~~ 333 (339)
T PRK06959 284 P-----------RAAALHAALARRGIWTRYFA-PPPSVRFG--LPADEAEWQRLEDALAECVPT 333 (339)
T ss_pred C-----------CHHHHHHHHHhCCeEEEECC-CCCeEEEE--CCCCHHHHHHHHHHHHHHHHH
Confidence 1 13568889999999998653 24689995 335788999999999987753
No 186
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=1.6e-22 Score=203.76 Aligned_cols=328 Identities=16% Similarity=0.117 Sum_probs=207.6
Q ss_pred CCEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHH
Q 011777 95 GRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLM 174 (477)
Q Consensus 95 G~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ 174 (477)
+..++||..|.. ++| .+|.+.+++.+...... .|.+..-.+|++.++++++.+.++|++|+|+++++..+++.
T Consensus 35 ~~~~i~l~~~~~--~~~-~~~~~~~al~~~~~~~~----~Y~~~~g~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~ 107 (371)
T PRK05166 35 VPRIAKLGSNEN--PLG-PSPAVRRAFADIAELLR----LYPDPQGRALREAIAARTGVPADRIILGNGSEDLIAVICRA 107 (371)
T ss_pred CcceEEcCCCCC--CCC-CCHHHHHHHHHHHHHhh----cCCCCcHHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHH
Confidence 446899887754 466 57889998876544321 24433334788999998877778899999999999988875
Q ss_pred HHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeE
Q 011777 175 ARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAG 254 (477)
Q Consensus 175 ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~ 254 (477)
.. .+++.|++..++|.+........ |.....++......++ .+++++.++ +++++
T Consensus 108 ~~--~~gd~vli~~P~y~~~~~~~~~~-------------g~~~~~v~~~~~~~~~------~~~l~~~~~----~~~~~ 162 (371)
T PRK05166 108 VL--RPGDRVVTLYPSFPLHEDYPTMM-------------GARVERVTVTPDLGFD------LDALCAAVA----RAPRM 162 (371)
T ss_pred hc--CCCCEEEEcCCChHHHHHHHHHc-------------CCeEEEeecCCCCCCC------HHHHHHhhh----cCCCE
Confidence 52 35678999999997654332221 2222222221111122 467777765 23344
Q ss_pred EEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCcccccc-CCCcc---eeeeccccc-Cccce
Q 011777 255 FIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQ-GVIPD---IVTMAKGIG-NGLPL 329 (477)
Q Consensus 255 vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~-gv~pD---ivt~sK~lg-~G~pi 329 (477)
|++...+|++|. ..+.+.+++|.++|++ ++++|+||+|..|...+.....+... ...+. +-+|||.++ .|+|+
T Consensus 163 v~l~~p~NPtG~-~~~~~~~~~l~~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRi 240 (371)
T PRK05166 163 LMFSNPSNPVGS-WLTADQLARVLDATPP-ETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRV 240 (371)
T ss_pred EEEeCCCCCCCC-CCCHHHHHHHHHhCCC-CcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhhe
Confidence 555444566674 5577788888888865 89999999999886332111111111 11122 336999999 79999
Q ss_pred EEEEe-CHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeE
Q 011777 330 GAVVT-TPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMV 408 (477)
Q Consensus 330 g~v~~-~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~ 408 (477)
||+++ ++++++.+.... ..++.|.+++.++.+++.. +++.++..+.....++.+.+..++++. ...++.|.++
T Consensus 241 G~~i~~~~~l~~~~~~~~--~~~~~~~~~q~~~~~~l~~---~~~~~~~~~~~~~~r~~l~~~L~~~g~-~~~p~~g~fl 314 (371)
T PRK05166 241 GYGLVSDPELVGLLDRVR--TPFNVNGAAQAAALAALDD---EEHLAKGVALALAERERLKKELAEMGY-RIAPSRANFL 314 (371)
T ss_pred eeeecCCHHHHHHHHHhc--cCCCCCHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHHHHCcC-eeCCCcCCEE
Confidence 99775 688888776433 3567788888888887752 233333333333333334333333443 2345568888
Q ss_pred EEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCC--CCCEEEEeCCCCCcHHHHHHHHHHHHHHHh
Q 011777 409 GMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGL--HGNVFRIKPPMCFTKDDADFLVDALDYSMS 475 (477)
Q Consensus 409 ~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~--~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~ 475 (477)
|+.+.. ...++.+.|+++||.+.++.. ..+++||+.. ++++.+++++.|++++.
T Consensus 315 ~~~~~~----------~~~~l~~~l~~~gi~v~p~~~~~~~~~iRi~~~---~~~~~~~l~~~l~~i~~ 370 (371)
T PRK05166 315 FFDARR----------PASAVAEALLRQGVIVKPWKQPGFETFIRVSIG---SPEENDHFVAALDKVLE 370 (371)
T ss_pred EEeCCC----------CHHHHHHHHHHCCeEEecCCCCCCCCeEEEEcC---CHHHHHHHHHHHHHHhh
Confidence 876521 135688899999999998742 2578999654 57778888888887653
No 187
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.91 E-value=7.4e-23 Score=202.90 Aligned_cols=283 Identities=15% Similarity=0.072 Sum_probs=184.9
Q ss_pred ccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCC
Q 011777 134 IYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQ 213 (477)
Q Consensus 134 ~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~ 213 (477)
.|+.+...+|++.|++.+....++|++|+|++|++..++++ . .+ +++++.+++|..+...+...+
T Consensus 36 ~Yp~~~~~~lr~~ia~~~~~~~~~I~it~Gs~~~l~~~~~~-~--~~-~~vv~~~P~y~~y~~~~~~~G----------- 100 (332)
T PRK06425 36 IYPEISYTDIEDQIKIYTQGLKIKVLIGPGLTHFIYRLLSY-I--NV-GNIIIVEPNFNEYKGYAFTHG----------- 100 (332)
T ss_pred cCcCcCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHH-h--CC-CcEEEeCCChHHHHHHHHHcC-----------
Confidence 47777789999999999988888999999999999998863 2 23 468888999988766554442
Q ss_pred CCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCee-EEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcC
Q 011777 214 GEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVA-GFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADE 292 (477)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a-~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DE 292 (477)
...+.+|... ++.+ .+ .++. .+++ .++++| +|++| ...+.+.+++|.++|++||++||+||
T Consensus 101 --~~v~~vp~~~---~~~~----~~----~l~~---~~~k~v~l~nP-~NPTG-~~~s~~~~~~l~~~a~~~~~~iI~DE 162 (332)
T PRK06425 101 --IRISALPFNL---INNN----PE----ILNN---YNFDLIFIVSP-DNPLG-NLISRDSLLTISEICRKKGALLFIDE 162 (332)
T ss_pred --CeEEEEeCCc---ccCc----HH----HHhh---cCCCEEEEeCC-CCCcC-CccCHHHHHHHHHHHHHcCCEEEEec
Confidence 2222222210 1111 12 2221 1334 444555 55666 45688899999999999999999999
Q ss_pred cccCccCCCCCCccccc---cCCCcceeeeccccc-CccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhh
Q 011777 293 VQTGFGRTGSHYWGFET---QGVIPDIVTMAKGIG-NGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVI 368 (477)
Q Consensus 293 v~~gfgr~G~~~~~~~~---~gv~pDivt~sK~lg-~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l 368 (477)
+|..|...+ ..-.... .+...-+-||||.++ .|+|+||+++++++++.+.... ..++.+.+++.+ +...
T Consensus 163 ~Y~~~~~~~-~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~~~~li~~l~~~~--~~~~~~~~~~~~----l~~~ 235 (332)
T PRK06425 163 AFIDFVPNR-AEEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIATDDYNMKISRKIT--EPWSVCDPAIDF----IRSI 235 (332)
T ss_pred chhcccccc-chhHHHHhccCCCEEEEeecHHhcCCchhhheeeecCHHHHHHHHHcC--CCCccCHHHHHH----HHHh
Confidence 999886433 1111111 122223347999999 8999999999999998887543 334444443322 2222
Q ss_pred chhh----HHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccC
Q 011777 369 DKER----RQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGG 444 (477)
Q Consensus 369 ~~~~----~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~ 444 (477)
..+. ..+.+++..+++.+.|++ ++......+.|.|+++.+. ...++.+.|+++||.+.++.
T Consensus 236 ~~~~~~~~~~~~~~~~r~~l~~~L~~----~g~~~~~~~~g~f~~~~~~-----------~~~~~~~~l~~~gi~v~~~~ 300 (332)
T PRK06425 236 DLDYVAKHSLDIMENERSYLINNLEA----MGFRAAGDPSANFITFMIP-----------DAHDFYSYLLKNGILVRLLD 300 (332)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHH----CCCEECCCCCceEEEEEcC-----------CHHHHHHHHHHCCeEEEECC
Confidence 2222 334444444444444443 3422112456888888762 14578889999999999885
Q ss_pred CC----CCEEEEeCCCCCcHHHHHHHHHHHHHHH
Q 011777 445 LH----GNVFRIKPPMCFTKDDADFLVDALDYSM 474 (477)
Q Consensus 445 ~~----~~~iRi~p~~~~t~e~i~~~l~~l~~~l 474 (477)
.+ .+++||+ ..++++.++++++|++++
T Consensus 301 ~f~~~~~~~iRis---~~~~~~~~~l~~al~~~~ 331 (332)
T PRK06425 301 DYECLGEQYIRIA---IRRRSFNIKLVNALRNFL 331 (332)
T ss_pred CCCCCCCCEEEEE---eCCHHHHHHHHHHHHHHh
Confidence 44 3699995 347899999999999876
No 188
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.91 E-value=5.4e-22 Score=199.94 Aligned_cols=318 Identities=17% Similarity=0.114 Sum_probs=202.3
Q ss_pred CCCHHHHHHHHHHHhhccccccccC--ChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhc--cCCceEEEE
Q 011777 112 HCHPDVLNAIFEQSKLLQHATTIYL--HHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLS--TGNLGMIAL 187 (477)
Q Consensus 112 h~~p~v~~Av~~~l~~~~~~~~~~~--~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~--~~~~~ii~~ 187 (477)
|++|++++++.+++.........+. .....+++++|+++++.+.+.++|++||++|+..+++.++.. .++++|++.
T Consensus 31 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~~~vl~~ 110 (371)
T PRK13520 31 EPHPIARKAHEMFLETNLGDPGLFPGTAKLEEEAVEMLGELLHLPDAYGYITSGGTEANIQAVRAARNLAKAEKPNIVVP 110 (371)
T ss_pred CchHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCCeEEecCcHHHHHHHHHHHHhhccCCCceEEec
Confidence 6899999999998875322222222 233478999999998765556889999999999999988654 235678887
Q ss_pred ccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCee
Q 011777 188 RNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAV 267 (477)
Q Consensus 188 ~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~ 267 (477)
++++..+...+... |.....+|.......+ .++|++.++ +++++|++...++++|.+
T Consensus 111 ~~~h~s~~~~~~~~-------------g~~~~~v~~~~~~~~d------~~~l~~~i~----~~~~~vi~~~~~~~tG~~ 167 (371)
T PRK13520 111 ESAHFSFDKAADML-------------GVELRRAPLDDDYRVD------VKAVEDLID----DNTIGIVGIAGTTELGQV 167 (371)
T ss_pred CcchHHHHHHHHHc-------------CceEEEecCCCCCcCC------HHHHHHHHh----hCCEEEEEEcCCcCCccc
Confidence 77665432221111 2222222221111111 578888886 234444433345667877
Q ss_pred eCCchhHHHHHHHHHHhCcEEEEcCcccCccC--CCC-CCccccccCCCcceeee--cccccCccceEEEEe-CHHHHHh
Q 011777 268 ELAPGYLKLVYDIVRKAGGVCIADEVQTGFGR--TGS-HYWGFETQGVIPDIVTM--AKGIGNGLPLGAVVT-TPEIANV 341 (477)
Q Consensus 268 ~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr--~G~-~~~~~~~~gv~pDivt~--sK~lg~G~pig~v~~-~~~~~~~ 341 (477)
.+ +++|.++|++||+++|+||+|+++.. ... ..+.+... ..|.+++ .|...+|+|+|+++. ++++.+.
T Consensus 168 ~~----l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~--~vd~~~~s~~K~~~a~~~~G~~~~~~~~~~~~ 241 (371)
T PRK13520 168 DP----IPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLP--GVDSITIDPHKMGLAPIPAGGILFRDESYLDA 241 (371)
T ss_pred CC----HHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCC--CCceEEECCccccCccCCceEEEEcCHHHHHh
Confidence 77 99999999999999999999986631 110 11222222 3465554 364445789987776 5557666
Q ss_pred hcccc----------cccCCCCcHHHHHHHHHHHHhhchh---hHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeE
Q 011777 342 MAQKI----------QFNTFGGNPVCSAGGLAVLRVIDKE---RRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMV 408 (477)
Q Consensus 342 ~~~~~----------~~~t~~~~~~~~aaa~a~l~~l~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~ 408 (477)
+.... ..+|. ++..++++.++|+.+.++ +..++..++.++++++|+++ +..........++
T Consensus 242 l~~~~~~~~~~~~~~~~gt~--~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~v 315 (371)
T PRK13520 242 LAVDTPYLTSKKQATLTGTR--SGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAEELKER----GFEPVIEPVLNIV 315 (371)
T ss_pred hcccCccccCCCCcceEeec--cChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHhC----CCEEecCCCceEE
Confidence 54211 01122 334577777888776554 35677777777887777664 2211122334455
Q ss_pred EEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 409 GMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 409 ~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
.+.+. ...++.+.|.++||.+..+. ..+++|++++..+|++||+++++.|++++++
T Consensus 316 ~~~~~-----------~~~~v~~~L~~~gi~v~~~~-~~~~iRis~~~~~t~edi~~~~~~l~~~~~~ 371 (371)
T PRK13520 316 AFDDP-----------NPDEVREKLRERGWRVSVTR-CPEALRIVCMPHVTREHIENFLEDLKEVKKR 371 (371)
T ss_pred EEecC-----------CHHHHHHHHHHCCceeccCC-CCCEEEEEEECCCCHHHHHHHHHHHHHHhhC
Confidence 55541 14578889999999988753 3568999888889999999999999988753
No 189
>PRK09265 aminotransferase AlaT; Validated
Probab=99.91 E-value=6.7e-22 Score=201.45 Aligned_cols=343 Identities=14% Similarity=0.084 Sum_probs=207.2
Q ss_pred CCCEEEeecCCcccccCCC-CCHHHHHHHHHHHhhccccccccCCh-HHHHHHHHHHhhC------CCCCCEEEEeCChH
Q 011777 94 NGRRYLDAFAGIVTVSCGH-CHPDVLNAIFEQSKLLQHATTIYLHH-AIADFAEALASKM------PGNLKVVYFVNSGT 165 (477)
Q Consensus 94 dG~~ylD~~~g~~~~~lGh-~~p~v~~Av~~~l~~~~~~~~~~~~~-~~~~l~~~La~~~------~~~~~~v~~~~sGs 165 (477)
.|+..+||..|... ++++ .++++.+++.+.+.... .|..+ ...+|++.+++++ +.+.++|++++|++
T Consensus 31 ~~~~~i~l~~g~p~-~~~~~~~~~i~~~~~~~~~~~~----~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~ 105 (404)
T PRK09265 31 EGHKILKLNIGNPA-PFGFEAPDEILRDVIRNLPTAQ----GYSDSKGLFSARKAIMQYYQQKGIPDVDVDDIYIGNGVS 105 (404)
T ss_pred cCCCeEEecCCCCC-cCCCCCCHHHHHHHHHHhhcCC----CCCCCCCcHHHHHHHHHHHhccCCCCCCcccEEEeCChH
Confidence 56678888877553 3454 46789998887665321 12222 1335555555544 45567899999999
Q ss_pred HHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHh
Q 011777 166 EANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHID 245 (477)
Q Consensus 166 eA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~ 245 (477)
+++..+++... .+++.|++.+++|..+.......+ ...+.++......+..| .+++++.+.
T Consensus 106 ~~l~~~~~~~~--~~gd~Vlv~~p~y~~~~~~~~~~g-------------~~~v~~~~~~~~~~~~d----~~~l~~~~~ 166 (404)
T PRK09265 106 ELIVMAMQALL--NNGDEVLVPAPDYPLWTAAVSLSG-------------GKPVHYLCDEEAGWFPD----LDDIRSKIT 166 (404)
T ss_pred HHHHHHHHHhC--CCCCEEEEeCCCCcChHHHHHHcC-------------CEEEEEecccccCCCCC----HHHHHHhcc
Confidence 99999887653 356789999999986544432221 11111111111111111 366777664
Q ss_pred ccCCCCeeE-EEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCcccccc-C--CCcceeeecc
Q 011777 246 FGTSGKVAG-FIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQ-G--VIPDIVTMAK 321 (477)
Q Consensus 246 ~~~~~~~a~-vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~-g--v~pDivt~sK 321 (477)
.++++ +++.| +|++| ...+.+.+++|.++|++||+++|+||+|.+|.+.+.....+... . ...-+-+|||
T Consensus 167 ----~~~~~v~l~~P-~NPtG-~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK 240 (404)
T PRK09265 167 ----PRTKAIVIINP-NNPTG-AVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSK 240 (404)
T ss_pred ----ccceEEEEECC-CCCCC-cCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcCCCceEEEEecchh
Confidence 24444 55555 56667 45578889999999999999999999999886544221121111 1 1112236899
Q ss_pred ccc-CccceEEEEe--CHH----HHHhhcccccccCCCCcHHHHHHHHHHHHhhch-hhHHH---HHHHHHHHHHHHHHH
Q 011777 322 GIG-NGLPLGAVVT--TPE----IANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDK-ERRQA---HCADVGSHLLGRLRT 390 (477)
Q Consensus 322 ~lg-~G~pig~v~~--~~~----~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~-~~~~~---~~~~~~~~l~~~L~~ 390 (477)
.++ .|+|+||+++ +++ +++.+... ...+++.|.+++.++.++|+..+. +.+.+ ++.+..+.+.+.|
T Consensus 241 ~~~~pGlRiG~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~L-- 317 (404)
T PRK09265 241 AYRVAGFRVGWMVLSGPKKHAKGYIEGLDML-ASMRLCANVPAQHAIQTALGGYQSINELILPGGRLYEQRDRAWELL-- 317 (404)
T ss_pred hccCcccceEEEEEeCchHHHHHHHHHHHHH-hccccCCCcHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHH--
Confidence 996 5999999996 443 33333211 223567788889988888853211 11221 2333333333333
Q ss_pred HHHhCCCceee-eccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCC----CCEEEEeCCCCCcHHHHHH
Q 011777 391 LQERHDIIGDV-RGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLH----GNVFRIKPPMCFTKDDADF 465 (477)
Q Consensus 391 l~~~~~~~~~v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~----~~~iRi~p~~~~t~e~i~~ 465 (477)
++++.+... +..|+++|+.+....... ......+.+.+.++||.+.|+..+ .+++|++. ..+++++++
T Consensus 318 --~~~~~~~~~~p~~g~~l~~~~~~~~~~~---~~~~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~--~~~~e~l~~ 390 (404)
T PRK09265 318 --NAIPGVSCVKPKGALYAFPKLDPKVYPI---HDDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVT--LPRVDDLEE 390 (404)
T ss_pred --hcCCCCcccCCCcceEEEEEecccccCC---CCHHHHHHHHHHhCCEEEECchhhCCCCCCeEEEEe--CCCHHHHHH
Confidence 334333323 334678888774211000 012345677888999999987543 46899975 468999999
Q ss_pred HHHHHHHHHhh
Q 011777 466 LVDALDYSMSK 476 (477)
Q Consensus 466 ~l~~l~~~l~~ 476 (477)
++++|.+++++
T Consensus 391 ~l~rl~~~l~~ 401 (404)
T PRK09265 391 AIGRIGRFLSG 401 (404)
T ss_pred HHHHHHHHHHH
Confidence 99999998864
No 190
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.91 E-value=1.9e-22 Score=199.92 Aligned_cols=303 Identities=11% Similarity=0.033 Sum_probs=198.4
Q ss_pred CCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEcc--C
Q 011777 113 CHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRN--A 190 (477)
Q Consensus 113 ~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~--~ 190 (477)
.||+|.++..+.+++.. +..+...+|+++|+++++.+.+.+++++||++||..++.... .+++.|+++.+ .
T Consensus 34 ~~~~~~~~~~~~~~~~~-----g~~~~~~~Le~~lA~~~g~~~e~ilv~~gg~~a~~~~~~al~--~~gd~Vli~~~d~p 106 (346)
T TIGR03576 34 GGFKIDEEDLELLETYV-----GPAIFEEKVQELGREHLGGPEEKILVFNRTSSAILATILALE--PPGRKVVHYLPEKP 106 (346)
T ss_pred CChhHHHHHHHHHHHhc-----CCHHHHHHHHHHHHHHcCCCcceEEEECCHHHHHHHHHHHhC--CCCCEEEECCCCCC
Confidence 59999999999988742 356889999999999997766899999999999999987543 24566765322 3
Q ss_pred ccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCC
Q 011777 191 YHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELA 270 (477)
Q Consensus 191 yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~ 270 (477)
+|..........+ ...... . + +++++. . .++++|++++. ++.|.+. +
T Consensus 107 ~~~s~~~~~~l~g------------a~~~~~--------~-~----l~~l~~----~--~~~~lIiitg~-s~~G~v~-~ 153 (346)
T TIGR03576 107 AHPSIPRSCKLAG------------AEYFES--------D-E----LSELKK----I--DGTSLVVITGS-TMDLKVV-S 153 (346)
T ss_pred CchhHHHHHHHcC------------CEEecc--------C-C----HHHHhh----C--cCceEEEEECC-CCCCccc-C
Confidence 4443322222221 111100 0 1 233321 1 23567777764 5566543 5
Q ss_pred chhHHHHHHHHHHhCcEEEEcCcccCcc--CCCCCCccccccCCCcceeeecccccCccceEEEEeCHHHHHhhcccccc
Q 011777 271 PGYLKLVYDIVRKAGGVCIADEVQTGFG--RTGSHYWGFETQGVIPDIVTMAKGIGNGLPLGAVVTTPEIANVMAQKIQF 348 (477)
Q Consensus 271 ~~~l~~l~~l~~~~gillI~DEv~~gfg--r~G~~~~~~~~~gv~pDivt~sK~lg~G~pig~v~~~~~~~~~~~~~~~~ 348 (477)
++.|++|.++|++||+++|+||+|..+. ..| .. ....++...-+.||||++ +|+++||+++++++++.+......
T Consensus 154 ~~~L~~i~~la~~~~~~livDEAy~~~~~~~~~-~~-~~~~~~~divv~s~SKal-aG~r~G~v~~~~~li~~l~~~~~~ 230 (346)
T TIGR03576 154 EEDLKRVIKQAKSKEAIVLVDDASGARVRRLYG-QP-PALDLGADLVVTSTDKLM-DGPRGGLLAGRKELVDKIKSVGEQ 230 (346)
T ss_pred HHHHHHHHHHHHHcCCEEEEECCccccccccCC-CC-CHHHcCCcEEEeccchhc-cccceEEEEeCHHHHHHHHHhhcC
Confidence 7779999999999999999999997431 112 11 112233222244789965 367899999999999998876555
Q ss_pred cCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHH
Q 011777 349 NTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAV 428 (477)
Q Consensus 349 ~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~ 428 (477)
..++.+++.++++.++|+.+..+...+.++++.+.+.+.++. .... ..+ +.|+++++... + ..+.
T Consensus 231 ~~~s~~~~~~~aa~~aL~~~~~~~~~~~l~~r~~~~~~~l~~----~~~~--~~~-~~f~~~~~~~~------~--~~~~ 295 (346)
T TIGR03576 231 FGLEAQAPLLAAVVRALEEFELSRIRDAFKRKEEVYLRLFDK----LNVE--RTP-TGFVIKGVEEE------K--LIEI 295 (346)
T ss_pred cccCccHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHh----CCCC--cCC-CeEEEEeCCCC------C--HHHH
Confidence 556678889999999998755444556666666665555543 2211 123 33666665210 1 1245
Q ss_pred HHHHHHHcCceeeccCCC---CCEEEEeCCCCCcHH---HHHHHHHHHHHHHh
Q 011777 429 LFEKLRELGVLVGKGGLH---GNVFRIKPPMCFTKD---DADFLVDALDYSMS 475 (477)
Q Consensus 429 ~~~~l~~~Gv~v~~~~~~---~~~iRi~p~~~~t~e---~i~~~l~~l~~~l~ 475 (477)
+.+.|.++||++.|+..+ ++++||+. ...++ +++.++++|++.++
T Consensus 296 ~~~ll~~~gV~v~~~~~f~~~~~~vRis~--~~~~~~~~~~~~~~~al~~~~~ 346 (346)
T TIGR03576 296 GLDLLRNYGIITITAVGMPGASKTLRFDL--AAKDAERIGDDYLVEAVKDSLK 346 (346)
T ss_pred HHHHHHhCCEEEeCCcccCCCCCeEEEEE--ecChHHhcCHHHHHHHHHhccC
Confidence 667788899999997433 57999954 34444 79999999988653
No 191
>PLN02721 threonine aldolase
Probab=99.91 E-value=4.1e-22 Score=199.41 Aligned_cols=334 Identities=16% Similarity=0.141 Sum_probs=203.9
Q ss_pred EEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHH
Q 011777 97 RYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMAR 176 (477)
Q Consensus 97 ~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar 176 (477)
+++||.++.+. ..+|.+.+++.+. ..... ..+..+...+|++.|+++++. +.++++++|++++..++....
T Consensus 6 ~~~~~~~~~~~----~~~~~~~~a~~~~--~~~~~-~~~~~~~~~~l~~~la~~~~~--~~~~~~~~Gs~a~~~~l~~~~ 76 (353)
T PLN02721 6 RVVDLRSDTVT----KPTDAMRAAMANA--EVDDD-VLGYDPTALRLEEEMAKIFGK--EAALFVPSGTMGNLISVLVHC 76 (353)
T ss_pred hhhhhhccccc----CCCHHHHHHHHhc--cCCCc-ccCCCHHHHHHHHHHHHHhCC--ceeEEecCccHHHHHHHHHHc
Confidence 56788888765 3688999998763 11121 234566688999999999965 457899999999988877643
Q ss_pred hccCCceEEEEccCccCCccc--ccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhcc---CCCC
Q 011777 177 LSTGNLGMIALRNAYHGGSSG--TIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFG---TSGK 251 (477)
Q Consensus 177 ~~~~~~~ii~~~~~yhG~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~---~~~~ 251 (477)
. .+++.|++.+++|...... .... .|.....+|... .+..| .+++++.++.. +.++
T Consensus 77 ~-~~gd~Vl~~~~~~~~~~~~~~~~~~------------~g~~~~~v~~~~--~~~~d----~~~l~~~i~~~~~~~~~~ 137 (353)
T PLN02721 77 D-VRGSEVILGDNSHIHLYENGGISTL------------GGVHPRTVKNNE--DGTMD----LDAIEAAIRPKGDDHFPT 137 (353)
T ss_pred c-CCCCeEEEcCccceehhcccchhhh------------cCceeEecCCCc--CCCcC----HHHHHHHHHhccCCCCCc
Confidence 2 1567888888876432221 1111 122222222111 11112 57888877621 1146
Q ss_pred eeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccC---CCCCCccccccCCCcceeeecccccCccc
Q 011777 252 VAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGR---TGSHYWGFETQGVIPDIVTMAKGIGNGLP 328 (477)
Q Consensus 252 ~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr---~G~~~~~~~~~gv~pDivt~sK~lg~G~p 328 (477)
+++|++++++++.|...++.+++++|.++|++||+++|+||+|. ++- .+...... ..+..--++++||++++ |
T Consensus 138 ~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~-~~~~~~~~~~~~~~-~~~~d~~~~s~sK~l~~--~ 213 (353)
T PLN02721 138 TRLICLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARI-FNASVALGVPVHRL-VKAADSVSVCLSKGLGA--P 213 (353)
T ss_pred ceEEEEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhh-hcchhhhCCCHHHH-hhhCCEEEEecccccCC--c
Confidence 78899988766544466788999999999999999999999985 321 11000000 11222224578999874 5
Q ss_pred eEE-EEeCHHHHHhhcccccccCCCCc--HHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCc-e-eeec
Q 011777 329 LGA-VVTTPEIANVMAQKIQFNTFGGN--PVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDII-G-DVRG 403 (477)
Q Consensus 329 ig~-v~~~~~~~~~~~~~~~~~t~~~~--~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~-~-~v~g 403 (477)
+|+ +++++++++.+.........+.+ ...+++++.+++... + ..++..++.+++.+.|+++ +.+ . ....
T Consensus 214 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~-~~~~~~~~~~~l~~~L~~~----~~~~~~~~~~ 287 (353)
T PLN02721 214 VGSVIVGSKSFIRKAKRLRKTLGGGMRQVGVLAAAALVALQENV-P-KLEDDHKKAKLLAEGLNQI----KGLRVNVAAV 287 (353)
T ss_pred eeeEEecCHHHHHhHHHHHHhcCCCeehhHHHHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHHHhC----CCcEEecCCc
Confidence 665 67888888765443211111111 223333444443211 1 1233344455666655543 222 1 1233
Q ss_pred cceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 404 RGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 404 ~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
.+.++++.+.... ......+.+.|.++||.+.+++ .+++|+++++.++++|+++++++|++++..
T Consensus 288 ~~~~~~~~~~~~~------~~~~~~~~~~L~~~gi~v~~~~--~~~lR~~~~~~~~~~~i~~~~~~l~~~~~~ 352 (353)
T PLN02721 288 ETNIVYFDITDGS------RITAEKLCKSLEEHGVLLMPGN--SSRIRVVTHHQISDSDVQYTLSCFQQAALT 352 (353)
T ss_pred cceEEEEEccCCc------cccHHHHHHHHHhCCcEEecCC--CceEEEEecCcCCHHHHHHHHHHHHHHhhc
Confidence 4567777763210 0124678999999999999875 578999999899999999999999998764
No 192
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.91 E-value=1.5e-21 Score=198.73 Aligned_cols=333 Identities=16% Similarity=0.088 Sum_probs=213.3
Q ss_pred CCEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccc-------cCChHHHHHHHHHHhhCCC-CCCEEEEeCChHH
Q 011777 95 GRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTI-------YLHHAIADFAEALASKMPG-NLKVVYFVNSGTE 166 (477)
Q Consensus 95 G~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~-------~~~~~~~~l~~~La~~~~~-~~~~v~~~~sGse 166 (477)
+..|||..+. |..++.|.+++.+.+......... ...+...++++.++++++. +.+.|+|++|+|+
T Consensus 19 ~~~yld~a~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~~~~~t~ 92 (401)
T PRK10874 19 AGVYLDSAAT------ALKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDAKNIVWTRGTTE 92 (401)
T ss_pred ceEEEeCCcc------cCCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCHHH
Confidence 4679996543 336789999998888653211111 1134467888999999987 6789999999999
Q ss_pred HHHHHHHHHH--hccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHH
Q 011777 167 ANELAMLMAR--LSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHI 244 (477)
Q Consensus 167 A~~~Al~~ar--~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i 244 (477)
++..+++... ...++++||+.++.|++........... .|+....++.......+ ++++++.+
T Consensus 93 ~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~---------~g~~v~~v~~~~~~~~d------~~~l~~~i 157 (401)
T PRK10874 93 SINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQ---------TGAKVVKLPLGADRLPD------VDLLPELI 157 (401)
T ss_pred HHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHH---------hCCEEEEEecCCCCcCC------HHHHHHhc
Confidence 9999988652 1245678999888887632211111000 12222222211111111 47788777
Q ss_pred hccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCcceeeec--cc
Q 011777 245 DFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMA--KG 322 (477)
Q Consensus 245 ~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~s--K~ 322 (477)
+ +++++|++..+++.+|.+.+ +++|.++|+++|+++|+|++|+ +|.. ..+.....+|++++| |.
T Consensus 158 ~----~~t~lv~i~~~~n~tG~~~~----~~~i~~l~~~~g~~~ivD~a~~-~g~~-----~~~~~~~~~d~~~~s~~K~ 223 (401)
T PRK10874 158 T----PRTRILALGQMSNVTGGCPD----LARAITLAHQAGMVVMVDGAQG-AVHF-----PADVQALDIDFYAFSGHKL 223 (401)
T ss_pred C----cCcEEEEEeCCcccccCcCC----HHHHHHHHHHcCCEEEEECCcc-cccc-----cCCchhcCCCEEEEecccc
Confidence 5 35677878778888888877 8999999999999999999996 3321 122223457877655 96
Q ss_pred ccCccceEEEEeCHHHHHhhccccccc---------------------CCCCcHHHHHHHHHHHHhhchh---hHHHHHH
Q 011777 323 IGNGLPLGAVVTTPEIANVMAQKIQFN---------------------TFGGNPVCSAGGLAVLRVIDKE---RRQAHCA 378 (477)
Q Consensus 323 lg~G~pig~v~~~~~~~~~~~~~~~~~---------------------t~~~~~~~~aaa~a~l~~l~~~---~~~~~~~ 378 (477)
+|. ..+|++++++++.+.+.....++ ..+.|..++++..++++.+.+. +..++.+
T Consensus 224 ~gp-~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~ 302 (401)
T PRK10874 224 YGP-TGIGVLYGKSELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWSR 302 (401)
T ss_pred cCC-CccEEEEEchHHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 652 24699999999887765321110 0123555667777777766443 3345555
Q ss_pred HHHHHHHHHHHHHHHhCCCceee-eccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCC----------CC
Q 011777 379 DVGSHLLGRLRTLQERHDIIGDV-RGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGL----------HG 447 (477)
Q Consensus 379 ~~~~~l~~~L~~l~~~~~~~~~v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~----------~~ 447 (477)
++.+++++.|++ ++.+... ...+.++.+.+.. ....++.+.|.++||.+.++.. ..
T Consensus 303 ~l~~~l~~~l~~----~~g~~~~~~~~~~i~~~~~~~---------~~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~g~~ 369 (401)
T PRK10874 303 SLATLAEDALAK----LPGFRSFRCQDSSLLAFDFAG---------VHHSDLVTLLAEYGIALRAGQHCAQPLLAALGVT 369 (401)
T ss_pred HHHHHHHHHHhc----CCCEEEeCCCCCcEEEEEECC---------cCHHHHHHHHHHCCcEEeccccchHHHHHHhCCC
Confidence 555555555544 3322222 1234455555521 1135677888899999987532 13
Q ss_pred CEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 448 NVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 448 ~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
+++|+++...+|++||+++++.|+++++.
T Consensus 370 ~~iRiS~~~~nt~edid~ll~al~~~~~~ 398 (401)
T PRK10874 370 GTLRASFAPYNTQSDVDALVNAVDRALEL 398 (401)
T ss_pred CEEEEEecccCCHHHHHHHHHHHHHHHHH
Confidence 68999999999999999999999998765
No 193
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.91 E-value=4e-22 Score=181.50 Aligned_cols=341 Identities=17% Similarity=0.187 Sum_probs=234.0
Q ss_pred ccCceeEEeeeccEEEeCCC--CEEEeecCCcccccCCC-CCHHHHHHHHHHHhhcccccc-----ccCChHHHHHHHHH
Q 011777 76 YQKPLNIVEGKMQYLFDENG--RRYLDAFAGIVTVSCGH-CHPDVLNAIFEQSKLLQHATT-----IYLHHAIADFAEAL 147 (477)
Q Consensus 76 ~~~p~~~~~g~G~~~~d~dG--~~ylD~~~g~~~~~lGh-~~p~v~~Av~~~l~~~~~~~~-----~~~~~~~~~l~~~L 147 (477)
++..-++++.+|..+. ++| +.+|.|+++.+ ||. +||+|++|-.++++.+..... .+.......|..+|
T Consensus 46 wk~erVi~s~q~p~i~-v~G~~k~ilnFcaNnY---LGLsshPeii~a~~~aleeyGaGlssvrfIcGtq~iHk~LE~ki 121 (417)
T KOG1359|consen 46 WKRERVITSRQGPTIQ-VKGSDKKILNFCANNY---LGLSSHPEIINAGQKALEEYGAGLSSVRFICGTQDIHKLLESKI 121 (417)
T ss_pred ceeeeEEeecccceEE-Eeccccceeeeccccc---ccccCChHHHHHHHHHHHHhCCCccceeEEecchHHHHHHHHHH
Confidence 3445678888888774 555 68899998765 776 599999999999988543221 25567889999999
Q ss_pred HhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCC
Q 011777 148 ASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHG 227 (477)
Q Consensus 148 a~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (477)
+++... +..++++|+-+||..++.... ++++.|.+ +.--|......+.+.. .|+.
T Consensus 122 Aqfh~r--ED~ilypscfdANag~feail--~pedAvfS-DeLNhASIIdGirLck--------------------ry~h 176 (417)
T KOG1359|consen 122 AQFHGR--EDTILYPSCFDANAGAFEAIL--TPEDAVFS-DELNHASIIDGIRLCK--------------------RYRH 176 (417)
T ss_pred HHHhCC--CceEEeccccccchHHHHHhc--Chhhhhhc-cccccchhhhhhHHHh--------------------hhcc
Confidence 999744 668899999999999887553 34444433 2233443333222211 0110
Q ss_pred CCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCccc-Cc-cCCCCCCc
Q 011777 228 SFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQT-GF-GRTGSHYW 305 (477)
Q Consensus 228 ~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~-gf-gr~G~~~~ 305 (477)
. | .-+++..+....+.+.+.|..+.+.++.|.+.| |++|.+|++|||.++++||.+. || |.+| . .
T Consensus 177 -~--d----v~~l~~~l~~a~k~r~klv~TDg~FSMDGdiaP----l~ei~~La~kYgaLlfiDecHaTgf~G~tG-r-G 243 (417)
T KOG1359|consen 177 -V--D----VFDLEHCLISACKMRLKLVVTDGVFSMDGDIAP----LEEISQLAKKYGALLFIDECHATGFFGETG-R-G 243 (417)
T ss_pred -c--h----hHHHHHHHHHhhhheEEEEEecceeccCCCccc----HHHHHHHHHhcCcEEEEeecccceeecCCC-C-C
Confidence 0 0 234444443223457889999999999999999 9999999999999999999975 33 5565 2 1
Q ss_pred cccccCC--Cccee--eecccccC--ccceEEEEeCHHHHHhhcccccccCCCC--cHHHHHHHHHHHHhh-chhhHHHH
Q 011777 306 GFETQGV--IPDIV--TMAKGIGN--GLPLGAVVTTPEIANVMAQKIQFNTFGG--NPVCSAGGLAVLRVI-DKERRQAH 376 (477)
Q Consensus 306 ~~~~~gv--~pDiv--t~sK~lg~--G~pig~v~~~~~~~~~~~~~~~~~t~~~--~~~~~aaa~a~l~~l-~~~~~~~~ 376 (477)
--+.+++ .+|++ |+||++|| | ||+.+++.+++.+++.....-|+. +|.....+.++++.+ .......+
T Consensus 244 t~E~~~vm~~vdiinsTLgKAlGga~G---Gyttgp~~li~llrqr~RpylFSnslppavV~~a~ka~dllm~s~~~i~~ 320 (417)
T KOG1359|consen 244 TAEEFGVMGDVDIINSTLGKALGGASG---GYTTGPKPLISLLRQRSRPYLFSNSLPPAVVGMAAKAYDLLMVSSKEIQS 320 (417)
T ss_pred hHHHhCCCCcceehhhhhhhhhcCCCC---CCccCChhHHHHHHhcCCceeecCCCChhhhhhhHHHHHHHHhhHHHHHH
Confidence 2356665 46666 79999995 6 899999999999987765555543 343344455666654 34567788
Q ss_pred HHHHHHHHHHHHHHHHHhCCCceeeeccc-eeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeecc-----CCCCCEE
Q 011777 377 CADVGSHLLGRLRTLQERHDIIGDVRGRG-LMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKG-----GLHGNVF 450 (477)
Q Consensus 377 ~~~~~~~l~~~L~~l~~~~~~~~~v~g~g-~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~-----~~~~~~i 450 (477)
...+.+++++.+... + .++.|.. .+..+.+ .+...+..+.+.|+++|+++..- +.....|
T Consensus 321 ~~a~~qrfr~~me~a----G--ftIsg~~hPI~pv~l--------Gda~lA~~~ad~lLk~Gi~Vigfs~PvVP~gkari 386 (417)
T KOG1359|consen 321 RQANTQRFREFMEAA----G--FTISGASHPICPVML--------GDARLASKMADELLKRGIYVIGFSYPVVPKGKARI 386 (417)
T ss_pred HHHHHHHHHHHHHhc----C--ceecCCCCCccceec--------ccHHHHHHHHHHHHhcCceEEeecCCcCCCCceEE
Confidence 888888888876543 1 1122211 1222333 24456788999999999988422 1224579
Q ss_pred EEeCCCCCcHHHHHHHHHHHHHHHh
Q 011777 451 RIKPPMCFTKDDADFLVDALDYSMS 475 (477)
Q Consensus 451 Ri~p~~~~t~e~i~~~l~~l~~~l~ 475 (477)
|+..+..||+||||++++++.++.+
T Consensus 387 RVqiSAaHt~edid~~i~Af~~vgr 411 (417)
T KOG1359|consen 387 RVQISAAHTEEDIDRLIEAFSEVGR 411 (417)
T ss_pred EEEEehhcCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999988764
No 194
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.91 E-value=8.1e-22 Score=185.83 Aligned_cols=344 Identities=16% Similarity=0.133 Sum_probs=219.3
Q ss_pred CEEEeecCCcccccCC--CCCHHHHHHHHHHHhhcc---ccccccCChHHHHHHHHHHhhCCCC--CCEEEEeCChHHHH
Q 011777 96 RRYLDAFAGIVTVSCG--HCHPDVLNAIFEQSKLLQ---HATTIYLHHAIADFAEALASKMPGN--LKVVYFVNSGTEAN 168 (477)
Q Consensus 96 ~~ylD~~~g~~~~~lG--h~~p~v~~Av~~~l~~~~---~~~~~~~~~~~~~l~~~La~~~~~~--~~~v~~~~sGseA~ 168 (477)
+.+|-+..|-+++ +| -..++..+||.+.+..+. |..+.+....+++.++.|.+-++.. .+.|++|+|.++|+
T Consensus 61 k~iipl~~GDPsv-~~~~~ts~~a~~Av~~al~Sgk~N~Yaps~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAI 139 (447)
T KOG0259|consen 61 KPILPLGHGDPSV-YPCFRTSQEAEQAVVDALRSGKGNGYAPSVGILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAI 139 (447)
T ss_pred ceeccCCCCCCCc-cccccCCHHHHHHHHHHHhcCCCCCcCCccccHHHHHHHHHHhhcCCCCccCcCceEEeccchHHH
Confidence 3556555554432 22 146789999999988642 2233344566777777777666543 46899999999999
Q ss_pred HHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCC-CCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhcc
Q 011777 169 ELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYP-IPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFG 247 (477)
Q Consensus 169 ~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~ 247 (477)
|.++.+.. .++..|+...++|.-+..-+....- ...++. .|..+|.. | ++.+|.+++
T Consensus 140 e~~i~~LA--~p~aNILlPrPGfp~Y~~~a~~~~l-EVR~ydlLPe~~weI-------------D----L~~veal~D-- 197 (447)
T KOG0259|consen 140 ELAISSLA--NPGANILLPRPGFPLYDTRAIYSGL-EVRYYDLLPEKDWEI-------------D----LDGVEALAD-- 197 (447)
T ss_pred HHHHHHhc--CCCCceecCCCCCchHHHhhhhcCc-eeEeecccCccccee-------------c----hHHHHHhhc--
Confidence 99998543 3677899999999755433332221 111111 22223322 1 577888876
Q ss_pred CCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCcccccc-CCCccee--eeccccc
Q 011777 248 TSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQ-GVIPDIV--TMAKGIG 324 (477)
Q Consensus 248 ~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~-gv~pDiv--t~sK~lg 324 (477)
.+.+|.||++|.|+.|+ +.+.+-|++|.++|+|+|+++|.||||..+-+.+..+..+..+ .+.|-+. .+||.+-
T Consensus 198 -ENT~AivviNP~NPcGn--Vys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVitlggisKrW~ 274 (447)
T KOG0259|consen 198 -ENTVAIVVINPNNPCGN--VYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVITLGGISKRWI 274 (447)
T ss_pred -cCeeEEEEeCCCCCCcc--cccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccCceEeecccccccc
Confidence 45778888888877764 5789999999999999999999999999887777445555443 4456444 3679887
Q ss_pred -CccceEEEEeCHH--------HHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHH----HHHHHHHHHHHHHHHH
Q 011777 325 -NGLPLGAVVTTPE--------IANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQA----HCADVGSHLLGRLRTL 391 (477)
Q Consensus 325 -~G~pig~v~~~~~--------~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~----~~~~~~~~l~~~L~~l 391 (477)
.|||+||++.... +.+.+.... .-+-+.+.+-|+|.-..|+.-. +++.+ -++.+.+...++|++
T Consensus 275 VPGWRlGWi~~hD~~gvf~~~~~~q~~~~~~-~~~~~p~TiiQ~AlP~IL~kTp-~efF~k~~~~lk~na~l~y~~Lk~- 351 (447)
T KOG0259|consen 275 VPGWRLGWIALHDPRGVFRDTKVVQGIKNFL-DIIPGPATIIQGALPDILEKTP-EEFFDKKLSFLKSNADLCYSRLKD- 351 (447)
T ss_pred cCCceeeeEEEecccccccchHHHHHHHHHH-hccCCccHhHHHHhHHHHHhCh-HHHHHHHHHHHHhhHHHHHHHHhc-
Confidence 5999999987531 222222211 1233445666666555554322 33333 333344444444444
Q ss_pred HHhCCCce-eeeccceeEE-EEEeeCCCCCCcc-HHHHHHHHHHHHHcCceeeccCCC--CCEEEEeCCCCCcHHHHHHH
Q 011777 392 QERHDIIG-DVRGRGLMVG-MELVTDRKEKTPA-KAETAVLFEKLRELGVLVGKGGLH--GNVFRIKPPMCFTKDDADFL 466 (477)
Q Consensus 392 ~~~~~~~~-~v~g~g~~~~-i~~~~~~~~~~~~-~~~~~~~~~~l~~~Gv~v~~~~~~--~~~iRi~p~~~~t~e~i~~~ 466 (477)
.|.+. .+++.|.|+. +.+... ..++ ..+.+...+..+|+.+++-||..+ .|++|++ +....+.++++
T Consensus 352 ---IP~l~cp~kPeg~mylmv~l~~s---~~~~~~dD~dFc~kL~~Eesv~~LPG~af~~~nw~Ri~--i~~~~~~leea 423 (447)
T KOG0259|consen 352 ---IPCLTCPVKPEGCMYLMVKLNLS---LFPDIEDDVDFCQKLAREESVICLPGQAFGLKNWLRIV--ITVEEEMLEEA 423 (447)
T ss_pred ---CCCcccCcCCCcceEEEeccchh---hhccccccHHHHHHHhhhcceEEeccccccCCCeEEEE--EccChHHHHHH
Confidence 46665 6788887764 333211 1111 112344455667889999998654 4899995 77889999999
Q ss_pred HHHHHHHHhh
Q 011777 467 VDALDYSMSK 476 (477)
Q Consensus 467 l~~l~~~l~~ 476 (477)
++||++...+
T Consensus 424 ~~Rik~Fc~R 433 (447)
T KOG0259|consen 424 FSRIKEFCDR 433 (447)
T ss_pred HHHHHHHHHh
Confidence 9999987643
No 195
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.91 E-value=6.9e-22 Score=204.78 Aligned_cols=316 Identities=14% Similarity=0.066 Sum_probs=189.3
Q ss_pred ChHHHHHHHHHHhhCC----CCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCC
Q 011777 137 HHAIADFAEALASKMP----GNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIP 212 (477)
Q Consensus 137 ~~~~~~l~~~La~~~~----~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~ 212 (477)
.+.+..+++.+.+..+ .+.++|++|+|+++|++.+++... .+++.|++.+++|.+.........
T Consensus 97 ~~LR~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~al~~l~~~l~--~pGD~Vlv~~P~Y~~~~~~~~~~~---------- 164 (496)
T PLN02376 97 KKFRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLA--DPGDVFLIPSPYYAAFDRDLRWRT---------- 164 (496)
T ss_pred HHHHHHHHHHHHHHhCCCCcCChhhEEEccchHHHHHHHHHHhC--CCCCEEEECCCCccchHHHHHhhC----------
Confidence 3445566666655432 456899999999999999988653 366889999999998754332111
Q ss_pred CCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhcc--CCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEE
Q 011777 213 QGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFG--TSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIA 290 (477)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~--~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~ 290 (477)
|+..+++|......++.+ .+++++.++.. ...++++|++...+|++| .+++++.+++|.++|++||++||+
T Consensus 165 --G~~vv~v~~~~~~~~~~~----~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG-~~~s~e~l~~L~~~a~~~~i~lI~ 237 (496)
T PLN02376 165 --GVEIIPVPCSSSDNFKLT----VDAADWAYKKAQESNKKVKGLILTNPSNPLG-TMLDKDTLTNLVRFVTRKNIHLVV 237 (496)
T ss_pred --CCEEEEEeCCCCccCcCC----HHHHHHHHHHHHhcCCCeeEEEEcCCCCCCC-ccCCHHHHHHHHHHHHHcCCEEEE
Confidence 333333332211222222 35555443211 123566555544456667 566899999999999999999999
Q ss_pred cCcccCccCCCCCCcccc-c---cC---CCcc----eeeeccccc-CccceEEEEeC-HHHHHhhcccccccCCCCcHHH
Q 011777 291 DEVQTGFGRTGSHYWGFE-T---QG---VIPD----IVTMAKGIG-NGLPLGAVVTT-PEIANVMAQKIQFNTFGGNPVC 357 (477)
Q Consensus 291 DEv~~gfgr~G~~~~~~~-~---~g---v~pD----ivt~sK~lg-~G~pig~v~~~-~~~~~~~~~~~~~~t~~~~~~~ 357 (477)
||+|..+.+.+..+-.+. . .+ ..++ +-+|||.+| .|+|+||++++ +.+.+.+.... ..+..+.+.
T Consensus 238 DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~~l~~~~~~~~--~~~~vs~~~ 315 (496)
T PLN02376 238 DEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFNDSVVSCARKMS--SFGLVSSQT 315 (496)
T ss_pred EcCccccccCCCCcccHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEEEECCHHHHHHHHHHh--hcCCCCHHH
Confidence 999998765552222211 1 01 1233 237999998 79999999995 55666544322 122356778
Q ss_pred HHHHHHHHHhhch-hhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHH-
Q 011777 358 SAGGLAVLRVIDK-ERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRE- 435 (477)
Q Consensus 358 ~aaa~a~l~~l~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~- 435 (477)
+.++.+.|+.-+- ++++++.++..+..++.+.+...++++.......|+++|+++...... ........++++.+.+
T Consensus 316 Q~a~~~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~gi~~~~~~aG~flwi~l~~~~~~-~~~~~~e~~l~~~ll~~ 394 (496)
T PLN02376 316 QLMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKADIACLTSNAGLFAWMDLRHLLRD-RNSFESEIELWHIIIDK 394 (496)
T ss_pred HHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCceEEEEEEchhhhcc-CCchhHHHHHHHHHHHc
Confidence 8777777642111 222222233223333333333333332222233468999988431110 0011123457777766
Q ss_pred cCceeeccCCC----CCEEEEeCCCCCcHHHHHHHHHHHHHHHh
Q 011777 436 LGVLVGKGGLH----GNVFRIKPPMCFTKDDADFLVDALDYSMS 475 (477)
Q Consensus 436 ~Gv~v~~~~~~----~~~iRi~p~~~~t~e~i~~~l~~l~~~l~ 475 (477)
.||.+.||..+ .+++||++.. .+++++++++++|.+++.
T Consensus 395 ~gV~v~pGs~F~~~~~g~~Ri~fa~-~~~~~l~~al~rl~~~l~ 437 (496)
T PLN02376 395 VKLNVSPGSSFRCTEPGWFRICFAN-MDDDTLHVALGRIQDFVS 437 (496)
T ss_pred CCEEEeCccccCCCCCCEEEEEeeC-CCHHHHHHHHHHHHHHHH
Confidence 59999998544 3699997543 468999999999999875
No 196
>PLN02672 methionine S-methyltransferase
Probab=99.91 E-value=7.1e-22 Score=215.12 Aligned_cols=356 Identities=11% Similarity=0.045 Sum_probs=217.5
Q ss_pred EEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCCCC---EEEEeCChH
Q 011777 89 YLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGNLK---VVYFVNSGT 165 (477)
Q Consensus 89 ~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~~---~v~~~~sGs 165 (477)
++.+.+|..+|++..|.. .++ .+|.|.+++.+.+.+..+ ..+..+.+.++++++++..+.+.+ +|++++|++
T Consensus 690 ~~~~~~g~~vI~LsinE~--d~p-pPp~V~eAi~eal~~~~~--s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~ 764 (1082)
T PLN02672 690 SVSGSQESSLIHMDVDES--FLP-VPSAVKASIFESFVRQNI--SESETDPRPSILQFIKSNYGFPTDSCTEFVYGDTSL 764 (1082)
T ss_pred CCcccCCCCEEEEeCCCC--CCC-CCHHHHHHHHHHHhhcCC--CCCChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHH
Confidence 455667889999887764 455 688999999887765332 112345578999999998765443 799999999
Q ss_pred HHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHh
Q 011777 166 EANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHID 245 (477)
Q Consensus 166 eA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~ 245 (477)
+++..+++.... +++.|++..++|..+...+...+ ...+.+|......|..| .++++++++
T Consensus 765 elL~lll~aLl~--pGD~VLVp~PtY~~Y~~~a~~~G-------------a~vv~Vpl~~e~gf~lD----~d~Le~al~ 825 (1082)
T PLN02672 765 ALFNKLVLCCVQ--EGGTLCFPAGSNGTYVSAAKFLK-------------ANFRRIPTKSSDGFKLT----AKTLASTLE 825 (1082)
T ss_pred HHHHHHHHHHcC--CCCEEEEeCCChHHHHHHHHHcC-------------CEEEEEecccccCCCCC----HHHHHHHhc
Confidence 999888775433 56889999999988766544332 22222222111123222 367777775
Q ss_pred ccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCC--cccc----cc-CCCc--ce
Q 011777 246 FGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHY--WGFE----TQ-GVIP--DI 316 (477)
Q Consensus 246 ~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~--~~~~----~~-gv~p--Di 316 (477)
. ....++++++|.+|++| .+++++.+++|.++|++||++||+||+|.++-+.+... +.+. .+ ...+ .+
T Consensus 826 ~--~~~~~I~L~nPnhNPTG-~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nV 902 (1082)
T PLN02672 826 T--VKKPWVYISGPTINPTG-LLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAV 902 (1082)
T ss_pred c--CCCCEEEEECcCCCCcC-ccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceE
Confidence 2 12346788888766777 56799999999999999999999999999887665211 1111 11 1111 12
Q ss_pred ---eeeccccc-CccceEEEEeCH-HHHHhhccccccc-CCCCcHHHHHHHHHHHHhhchhhHHHHHHHH---HHHHHHH
Q 011777 317 ---VTMAKGIG-NGLPLGAVVTTP-EIANVMAQKIQFN-TFGGNPVCSAGGLAVLRVIDKERRQAHCADV---GSHLLGR 387 (477)
Q Consensus 317 ---vt~sK~lg-~G~pig~v~~~~-~~~~~~~~~~~~~-t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~---~~~l~~~ 387 (477)
-+|||.++ +|+|+||+++++ ++++.+....... .+..+..+++++++++.. +..++.+++.+. .+.-++.
T Consensus 903 IvL~SfSKkf~lpGLRIGylIap~~eLi~~l~~~~~~s~~~~~~q~Aaaaalall~~-~~~~~~~~l~e~r~~Lk~rRd~ 981 (1082)
T PLN02672 903 ALLGGLSTELLSGGHEFGFLALNDSVLIDAFHSAPGLSRPHSTLKYTIKKLLGLKNQ-KSSDLLDGVAEQKKILKSRAER 981 (1082)
T ss_pred EEEeCcHHhhccHHHHheeEEeCCHHHHHHHHHhhhhcCCCcHHHHHHHHHHHHHhc-cCcHHHHHHHHHHHHHHHHHHH
Confidence 26899999 499999999964 5888776532111 122233444444433320 112222222222 2222223
Q ss_pred HHHHHHhCCCceeeeccc-eeEEEEEeeCC--CC--CCcc-----HHHHHHHHHHHHHc-CceeeccCCC--CCEEEEeC
Q 011777 388 LRTLQERHDIIGDVRGRG-LMVGMELVTDR--KE--KTPA-----KAETAVLFEKLREL-GVLVGKGGLH--GNVFRIKP 454 (477)
Q Consensus 388 L~~l~~~~~~~~~v~g~g-~~~~i~~~~~~--~~--~~~~-----~~~~~~~~~~l~~~-Gv~v~~~~~~--~~~iRi~p 454 (477)
+.+...+++. ...++.| .++|+.+..-. .. ..+. .....++.+.|+++ ||.+.||..+ .+++||+.
T Consensus 982 L~e~L~~~Gi-~v~~PeGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~~g~~RIsf 1060 (1082)
T PLN02672 982 LKETLEACGW-DVLEPQGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGIPGYCRFSF 1060 (1082)
T ss_pred HHHHHHHCCC-eEecCCcEEEEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCcccCCCCeEEEEe
Confidence 3333333443 3344554 45565542100 00 0000 11245788888765 9999998443 47899964
Q ss_pred CCCCcHHHHHHHHHHHHHHHh
Q 011777 455 PMCFTKDDADFLVDALDYSMS 475 (477)
Q Consensus 455 ~~~~t~e~i~~~l~~l~~~l~ 475 (477)
..+++++++++++|.+...
T Consensus 1061 --a~~~e~LeeALerL~kf~~ 1079 (1082)
T PLN02672 1061 --ALEDSEFDRALKAIARFKE 1079 (1082)
T ss_pred --cCCHHHHHHHHHHHHHHHH
Confidence 4688999999999998653
No 197
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.91 E-value=2.6e-22 Score=204.24 Aligned_cols=341 Identities=13% Similarity=0.077 Sum_probs=201.5
Q ss_pred CCEEEeecCCcccccCCCCCHHHHHHHHHHHhhccc--ccccc-CChHHHHHHHHHHhhC---CCCCCEEEEeCChHHHH
Q 011777 95 GRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQH--ATTIY-LHHAIADFAEALASKM---PGNLKVVYFVNSGTEAN 168 (477)
Q Consensus 95 G~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~--~~~~~-~~~~~~~l~~~La~~~---~~~~~~v~~~~sGseA~ 168 (477)
|..++|+..|.. .++ ..|.+.+++.+.+.+... ....| +.....+|.+.+++.+ ..+.++|++|+|+++++
T Consensus 32 ~~~~i~l~~~~~--~~~-~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~~~~~d~I~it~Ga~~al 108 (402)
T TIGR03542 32 SADIIRLGIGDT--TQP-LPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRGRIDPEEIFISDGAKCDV 108 (402)
T ss_pred CCCeEEcCCCCC--CCC-CCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhcCCCHHHEEECCCcHHHH
Confidence 567788877654 233 368899999887765321 11123 2233455666666543 34568999999999999
Q ss_pred HHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCe-eeecCCCCcCCCCCCCHHHHHHHHHHHHhcc
Q 011777 169 ELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEI-HHVVNPDPYHGSFGSDAARYAQDLQDHIDFG 247 (477)
Q Consensus 169 ~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~ 247 (477)
...+.+ ..+++.|++.+++|.++.......+.... . .....+ ..+++|......+. .++++
T Consensus 109 ~~l~~l---~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~-~--~~~~~~~~~~~v~~~~~~~~~-------~~~~~----- 170 (402)
T TIGR03542 109 FRLQSL---FGSDNTVAVQDPVYPAYVDSNVMAGRAGV-L--DDDGRYSKITYLPCTKENNFI-------PDLPE----- 170 (402)
T ss_pred HHHHHh---cCCCCEEEEeCCCCcchHHHHHHcCCccc-c--ccccccceEEEeecchhhCCC-------CCccc-----
Confidence 875432 23567899999999988655444332110 0 000111 22222211111111 11111
Q ss_pred CCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccc-ccc---CCCcceeeecccc
Q 011777 248 TSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGF-ETQ---GVIPDIVTMAKGI 323 (477)
Q Consensus 248 ~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~-~~~---gv~pDivt~sK~l 323 (477)
..++++|++...+|++| .+++.+.+++|.++|++||++||+||+|..|...+.....+ ... +....+-+|||.+
T Consensus 171 -~~~~~~i~l~nP~NPTG-~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~ 248 (402)
T TIGR03542 171 -EPKIDIIYLCSPNNPTG-TVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEFRSFSKTA 248 (402)
T ss_pred -cCCceEEEEeCCCCCCC-ccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEEecCcccc
Confidence 12445555545566677 56788999999999999999999999999885443111111 111 1223344799999
Q ss_pred c-CccceEEEEeCHHHH--------HhhcccccccCC-CCcHHHHHHHHHHHHhhchh---hHHHHHHHHHHHHHHHHHH
Q 011777 324 G-NGLPLGAVVTTPEIA--------NVMAQKIQFNTF-GGNPVCSAGGLAVLRVIDKE---RRQAHCADVGSHLLGRLRT 390 (477)
Q Consensus 324 g-~G~pig~v~~~~~~~--------~~~~~~~~~~t~-~~~~~~~aaa~a~l~~l~~~---~~~~~~~~~~~~l~~~L~~ 390 (477)
| .|+|+||++++++++ ..+.. ....++ +.+.+++.++.+.++.-..+ +..+.++++.+.+.+.|++
T Consensus 249 g~pGlRiG~~i~~~~l~~~~~~~~~~~~~~-~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~ 327 (402)
T TIGR03542 249 GFTGVRLGWTVVPKELTYADGHSVIQDWER-RQCTKFNGASYPVQRAAEAAYAGEGLQPILEAISYYMENARILRKALEA 327 (402)
T ss_pred CCCCcceEEEEecHHHhhcchhhHHHHHHH-HhhhcccCCCHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHh
Confidence 8 799999999998876 22211 111223 46778888877776521111 1223333444444444433
Q ss_pred HHHhCCCceeeec-cceeEEEEEeeCCCCCCccHHHHHHHHHHHH-HcCceeeccCCC----CCEEEEeCCCCCcHHHHH
Q 011777 391 LQERHDIIGDVRG-RGLMVGMELVTDRKEKTPAKAETAVLFEKLR-ELGVLVGKGGLH----GNVFRIKPPMCFTKDDAD 464 (477)
Q Consensus 391 l~~~~~~~~~v~g-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~----~~~iRi~p~~~~t~e~i~ 464 (477)
++ +....+ .|.++|+++... ....++.+.|+ +.||.+.++..+ .+++||+ +..++++++
T Consensus 328 ----~~-~~~~~~~~~~f~~v~l~~~--------~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis--~~~~~~~l~ 392 (402)
T TIGR03542 328 ----AG-FKVYGGEHAPYLWVKTPEG--------ISSWDFFDFLLYQYHVVGTPGSGFGPSGEGFVRFS--AFGKRENIV 392 (402)
T ss_pred ----cC-ceecCCCceeEEEEECCCC--------CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEE--ecCCHHHHH
Confidence 33 222233 466888887321 11345777766 579999987432 3689996 445899999
Q ss_pred HHHHHHHHHH
Q 011777 465 FLVDALDYSM 474 (477)
Q Consensus 465 ~~l~~l~~~l 474 (477)
+++++|.+++
T Consensus 393 ~~l~~l~~~~ 402 (402)
T TIGR03542 393 EACERIKEAL 402 (402)
T ss_pred HHHHHHHhhC
Confidence 9999998763
No 198
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.91 E-value=6.3e-22 Score=200.07 Aligned_cols=328 Identities=16% Similarity=0.161 Sum_probs=204.4
Q ss_pred EEeecCCcccccCCCCCHHHHHHHHHHHhhcc-cccccc-----CChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHH
Q 011777 98 YLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQ-HATTIY-----LHHAIADFAEALASKMPGNLKVVYFVNSGTEANELA 171 (477)
Q Consensus 98 ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~-~~~~~~-----~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~A 171 (477)
|||..+.. ..++.|.+++.+.+.... +....+ ......+++++++++++.+.++|+|++||+++++.+
T Consensus 2 yld~aa~~------~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~t~~~t~a~~~a 75 (379)
T TIGR03402 2 YLDNNATT------RVDPEVLEAMLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLLGAEPDEIIFTSGGTESDNTA 75 (379)
T ss_pred cCCCcCCC------CCCHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHH
Confidence 77866544 368899999998876421 111111 123466888999999987778899999999999999
Q ss_pred HHHHHhc-cCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCC
Q 011777 172 MLMARLS-TGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSG 250 (477)
Q Consensus 172 l~~ar~~-~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~ 250 (477)
++.+... .+++.|++....|++.......... .|+....+|.......+ .++++++++ +
T Consensus 76 l~~~~~~~~~~~~vv~~~~~~~s~~~~~~~~~~----------~G~~v~~v~~~~~g~~~------~~~l~~~i~----~ 135 (379)
T TIGR03402 76 IKSALAAQPEKRHIITTAVEHPAVLSLCQHLEK----------QGYKVTYLPVDEEGRLD------LEELRAAIT----D 135 (379)
T ss_pred HHHHHHhcCCCCeEEEcccccHHHHHHHHHHHH----------cCCEEEEEccCCCCcCC------HHHHHHhcC----C
Confidence 9876432 3455666666666543221111100 12222222211111111 477888775 3
Q ss_pred CeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCcceeeec--ccccCccc
Q 011777 251 KVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMA--KGIGNGLP 328 (477)
Q Consensus 251 ~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~s--K~lg~G~p 328 (477)
+++++++..+++++|.+.+ +++|.++|++||+++|+|++|+ +|. ..++.....+|++++| | +.|...
T Consensus 136 ~~~lv~i~~~~n~tG~~~~----~~~I~~l~~~~g~~vivD~~~~-~g~-----~~~~~~~~~~D~~~~s~~K-~~gp~G 204 (379)
T TIGR03402 136 DTALVSVMWANNETGTIFP----IEEIGEIAKERGALFHTDAVQA-VGK-----IPIDLKEMNIDMLSLSGHK-LHGPKG 204 (379)
T ss_pred CcEEEEEEcccCCeeeccc----HHHHHHHHHHcCCEEEEECccc-ccc-----cccCcccCCCCEEEEcHHH-cCCCCc
Confidence 5678888888888998887 8899999999999999999997 432 1234444567999888 9 655556
Q ss_pred eEEEEeCHHHHHhhcccccc-------cCCCCcHHHHHHHHHHHHhhch--hhHHHHHHHHHHHHHHHHHHHHHhCCCce
Q 011777 329 LGAVVTTPEIANVMAQKIQF-------NTFGGNPVCSAGGLAVLRVIDK--ERRQAHCADVGSHLLGRLRTLQERHDIIG 399 (477)
Q Consensus 329 ig~v~~~~~~~~~~~~~~~~-------~t~~~~~~~~aaa~a~l~~l~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~ 399 (477)
+|+++.+++.. +.+...+ -....|..+..+..++++.+.+ ++..++.+++.++++++|.+ ..+.+.
T Consensus 205 ~g~l~v~~~~~--~~p~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~---~~~~~~ 279 (379)
T TIGR03402 205 VGALYIRKGTR--FRPLLRGGHQERGRRAGTENVPGIVGLGKAAELATEHLEEENTRVRALRDRLEAGLLA---RIPDAR 279 (379)
T ss_pred eEEEEECCCCC--CCCcccCCccCCCcCCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh---hCCCEE
Confidence 88988887642 2221111 1123455666666677776543 23345555555566655543 122211
Q ss_pred ee---ecc-ceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCC---------------------CCCEEEEeC
Q 011777 400 DV---RGR-GLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGL---------------------HGNVFRIKP 454 (477)
Q Consensus 400 ~v---~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~---------------------~~~~iRi~p 454 (477)
-. ... ...+.+.+.. + ...++...|.++||.+..+.. ..+.+|+++
T Consensus 280 ~~~~~~~~~~~~~~~~~~~------~---~~~~~~~~l~~~gI~v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~ 350 (379)
T TIGR03402 280 LNGDPTKRLPNTVNISFEY------I---EGEAILLLLDMEGICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSL 350 (379)
T ss_pred EeCCCccCCCCEEEEEecC------C---CHHHHHHhhccCCEEEEchhhcCCCCCCcCHHHHHcCCChhhcCceEEEEc
Confidence 11 001 1123333311 1 134677888889999986521 136899999
Q ss_pred CCCCcHHHHHHHHHHHHHHHhh
Q 011777 455 PMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 455 ~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
+..+|++|||++++.|++++++
T Consensus 351 ~~~~t~~di~~~~~~l~~~~~~ 372 (379)
T TIGR03402 351 SRYNTEEDIDYVLEVLPPIIAR 372 (379)
T ss_pred CCCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999988754
No 199
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.91 E-value=1e-21 Score=199.29 Aligned_cols=334 Identities=14% Similarity=0.097 Sum_probs=206.9
Q ss_pred CEEEeecCCcccccCCCCCHHHHHHHHHHHhhcccccccc-----CChHHHHHHHHHHhhC--CCCCCEEEEeCChHHHH
Q 011777 96 RRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIY-----LHHAIADFAEALASKM--PGNLKVVYFVNSGTEAN 168 (477)
Q Consensus 96 ~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~-----~~~~~~~l~~~La~~~--~~~~~~v~~~~sGseA~ 168 (477)
...+||..|.+. + ..++.+.+++.+.++........| ..+.+..+++.+.... +.+.++|++++|+++++
T Consensus 33 ~~~~~l~~g~p~--~-~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~al 109 (394)
T PRK06836 33 DNVFDFSLGNPS--V-PPPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLTADHIVMTCGAAGAL 109 (394)
T ss_pred CCeEEecCcCCC--C-CCCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChHHHH
Confidence 457888776542 2 256788888887665321111122 2233444555554432 23567899999999999
Q ss_pred HHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccC
Q 011777 169 ELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGT 248 (477)
Q Consensus 169 ~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~ 248 (477)
..+++... .+++.|++.+++|.++....... |+....++.... .++.| .++++++++
T Consensus 110 ~~~~~~l~--~~gd~Vli~~p~~~~~~~~~~~~-------------g~~v~~v~~~~~-~~~~d----~~~l~~~~~--- 166 (394)
T PRK06836 110 NVALKAIL--NPGDEVIVFAPYFVEYRFYVDNH-------------GGKLVVVPTDTD-TFQPD----LDALEAAIT--- 166 (394)
T ss_pred HHHHHHhc--CCCCEEEEcCCCCccHHHHHHHc-------------CCEEEEEecCCc-cCcCC----HHHHHhhcC---
Confidence 99887653 35678999999888764432221 222222221111 01111 477777775
Q ss_pred CCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHH------hCcEEEEcCcccCccCCCCCCcc-ccccCCCcceeeecc
Q 011777 249 SGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRK------AGGVCIADEVQTGFGRTGSHYWG-FETQGVIPDIVTMAK 321 (477)
Q Consensus 249 ~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~------~gillI~DEv~~gfgr~G~~~~~-~~~~gv~pDivt~sK 321 (477)
+++++|++...++++| ...+.+.+++|.++|++ ||+++|+||+|.+|...+..... ....+...-+-+|||
T Consensus 167 -~~~~~v~~~~p~NPtG-~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK 244 (394)
T PRK06836 167 -PKTKAVIINSPNNPTG-VVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFKYYDNSIVVYSFSK 244 (394)
T ss_pred -cCceEEEEeCCCCCCC-cCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHHccCcEEEEecchh
Confidence 3566677666677777 45578889999999999 89999999999988554411111 112222222336899
Q ss_pred ccc-CccceEEEEeCHHHHHh---hcc---ccc-ccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHH
Q 011777 322 GIG-NGLPLGAVVTTPEIANV---MAQ---KIQ-FNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQE 393 (477)
Q Consensus 322 ~lg-~G~pig~v~~~~~~~~~---~~~---~~~-~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~ 393 (477)
.++ .|+|+||+++++++.+. ... ... .+.++.+++.+.++...++. ....+.++++.+.+.+.|++
T Consensus 245 ~~~~pGlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~---~~~~~~~~~~r~~l~~~L~~--- 318 (394)
T PRK06836 245 SLSLPGERIGYIAVNPEMEDADDLVAALVFANRILGFVNAPALMQRVVAKCLDA---TVDVSIYKRNRDLLYDGLTE--- 318 (394)
T ss_pred hccCcceeeEEEecCHHHhhhHHHHHHHHHHhhccccccCCHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHh---
Confidence 999 79999999999876432 111 111 12245667777777666642 22234455555555555543
Q ss_pred hCCCceeeec-cceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCC--CCEEEEeCCCCCcHHHHHHHHHHH
Q 011777 394 RHDIIGDVRG-RGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLH--GNVFRIKPPMCFTKDDADFLVDAL 470 (477)
Q Consensus 394 ~~~~~~~v~g-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~--~~~iRi~p~~~~t~e~i~~~l~~l 470 (477)
++. ....+ .|+++|+.+.. . ...++.+.|.++||.+.++..+ .+++||+.. .+++++++++++|
T Consensus 319 -~g~-~~~~~~gg~~~~~~~~~------~---~~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~~--~~~~~~~~~i~~l 385 (394)
T PRK06836 319 -LGF-ECVKPQGAFYLFPKSPE------E---DDVAFCEKAKKHNLLLVPGSGFGCPGYFRLSYC--VDTETIERSLPAF 385 (394)
T ss_pred -CCC-EeecCCceEEEEEeCCC------C---CHHHHHHHHHhCCEEEECchhcCCCCeEEEEec--CCHHHHHHHHHHH
Confidence 342 22333 35666765521 1 2345678889999999998543 478999765 6899999999999
Q ss_pred HHHHhh
Q 011777 471 DYSMSK 476 (477)
Q Consensus 471 ~~~l~~ 476 (477)
.+++++
T Consensus 386 ~~~l~~ 391 (394)
T PRK06836 386 EKLAKE 391 (394)
T ss_pred HHHHHH
Confidence 998864
No 200
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.91 E-value=1.5e-22 Score=194.17 Aligned_cols=336 Identities=15% Similarity=0.079 Sum_probs=219.4
Q ss_pred CCHHHHHHHHHHHhhc---cccccccCChHHHHHHHHHHhhCCC---CCCEEEEeCChHHHHHHHHHHHHhccCCceEEE
Q 011777 113 CHPDVLNAIFEQSKLL---QHATTIYLHHAIADFAEALASKMPG---NLKVVYFVNSGTEANELAMLMARLSTGNLGMIA 186 (477)
Q Consensus 113 ~~p~v~~Av~~~l~~~---~~~~~~~~~~~~~~l~~~La~~~~~---~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~ 186 (477)
.+.-|.+++.+.++.. .++...+..+.+..|++++.++++. ..++|++|+|+.+|+..++..... .++.||+
T Consensus 45 ~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l~~--~GDeVii 122 (420)
T KOG0257|consen 45 PPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALLGLLN--PGDEVIV 122 (420)
T ss_pred CcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHHHHcC--CCCEEEE
Confidence 3567788888877653 2223334556688888888886542 346799999999999988876543 7899999
Q ss_pred EccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCe
Q 011777 187 LRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGA 266 (477)
Q Consensus 187 ~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~ 266 (477)
+++.|..+.......++.+.+....+..|- + +...|..| .+++|..+. +++++|+++..+|++|
T Consensus 123 ~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~--~-----~s~~~~~D----~~~le~~~t----~kTk~Ii~ntPhNPtG- 186 (420)
T KOG0257|consen 123 FEPFFDCYIPQVVMAGGTPVFVPLKPKEGN--V-----SSSDWTLD----PEELESKIT----EKTKAIILNTPHNPTG- 186 (420)
T ss_pred ecCcchhhhhHHhhcCCcceeecccccccc--c-----cCccccCC----hHHHHhhcc----CCccEEEEeCCCCCcC-
Confidence 999999887776666554433222111111 0 11122222 478888887 4667777776667777
Q ss_pred eeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCcccc-ccC---CCcceeeecccccC-ccceEEEEeCHHHHHh
Q 011777 267 VELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFE-TQG---VIPDIVTMAKGIGN-GLPLGAVVTTPEIANV 341 (477)
Q Consensus 267 ~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~-~~g---v~pDivt~sK~lg~-G~pig~v~~~~~~~~~ 341 (477)
-+.+++.|++|.+||++||+++|+||||.-+-+.|.++..+. ..| ....+-++||.++. |||+||+++++.+...
T Consensus 187 kvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TGWrlGW~igp~~L~~~ 266 (420)
T KOG0257|consen 187 KVFSREELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKTFGVTGWRLGWAIGPKHLYSA 266 (420)
T ss_pred cccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEeccccceeeeeeeeeeeeechHHhhhh
Confidence 456899999999999999999999999998887774333221 133 34445578999995 9999999998888887
Q ss_pred hcccccccCCCCcHHHHHHHHHHHHhhch----------hhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEE
Q 011777 342 MAQKIQFNTFGGNPVCSAGGLAVLRVIDK----------ERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGME 411 (477)
Q Consensus 342 ~~~~~~~~t~~~~~~~~aaa~a~l~~l~~----------~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~ 411 (477)
+........|..+...+.|..+++..-.. .++...++++++.+.+.|.++ +.......-+.+++.+
T Consensus 267 ~~~vh~~~~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~l----g~~v~~p~gayyl~ad 342 (420)
T KOG0257|consen 267 LFPVHQNFVFTCPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKALEEL----GLKVTGPEGAYYLWAD 342 (420)
T ss_pred HHHHhhccccccCcHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhc----CCccccCCCceEEEEe
Confidence 77666666677676677776666653220 124556666666676666665 3222223335566888
Q ss_pred EeeCCCCCCccH-----HHHHHHHHHHHHcCceeeccCCC---------CCEEEEeCCCCCcHHHHHHHHHHHHH
Q 011777 412 LVTDRKEKTPAK-----AETAVLFEKLRELGVLVGKGGLH---------GNVFRIKPPMCFTKDDADFLVDALDY 472 (477)
Q Consensus 412 ~~~~~~~~~~~~-----~~~~~~~~~l~~~Gv~v~~~~~~---------~~~iRi~p~~~~t~e~i~~~l~~l~~ 472 (477)
+........+.. .........+.+.|+.+.|...+ ++.+|+ .++-+++.++.++++|..
T Consensus 343 fs~~~~~~~~~~~~~~~~d~~~~~wl~~~~Gv~~IP~saF~s~~~~~~~~~~~r~--~~~k~~~~L~~a~e~l~~ 415 (420)
T KOG0257|consen 343 FSLAKSWPFFEEILEKPDDFKFVRWLIKEGGVVVIPPSAFGSREHIKVAERLVRF--CFCKADETLRKAIERLKK 415 (420)
T ss_pred ccccccCCcchhhccCCCceeeehhhhccCcEEEeCchhcCCchhhHHHHHHHHH--HHHhhHHHHHHHHHHHhh
Confidence 762211100100 11122344566778888776433 235666 466778888888888873
No 201
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.90 E-value=2.8e-21 Score=199.55 Aligned_cols=315 Identities=15% Similarity=0.089 Sum_probs=187.0
Q ss_pred hHHHHHHHHHHhhCC----CCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCC
Q 011777 138 HAIADFAEALASKMP----GNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQ 213 (477)
Q Consensus 138 ~~~~~l~~~La~~~~----~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~ 213 (477)
+.+..+++.+.+..+ .+.++|++|+|++++++.++.... .+++.|++.+++|.++........
T Consensus 90 ~LR~aiA~~l~~~~~~~~~v~~~~Iiit~Ga~~al~~l~~~l~--~pGd~Vlv~~P~Y~~~~~~~~~~~----------- 156 (468)
T PLN02450 90 AFKNALAEFMSEIRGNKVTFDPNKLVLTAGATSANETLMFCLA--EPGDAFLLPTPYYPGFDRDLKWRT----------- 156 (468)
T ss_pred HHHHHHHHHHHHhhCCCCCcChHHeEEccChHHHHHHHHHHhC--CCCCEEEECCCCCCchHHHHhhcC-----------
Confidence 445556666654322 356789999999999998887553 367889999999988744332111
Q ss_pred CCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhcc--CCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEc
Q 011777 214 GEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFG--TSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIAD 291 (477)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~--~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~D 291 (477)
|...+++|......+..+ .+++++.++.. ...+++++++...+|++| .+.+++.+++|.++|++||++||+|
T Consensus 157 -g~~~v~v~~~~~~~~~~~----~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG-~~~s~e~l~~ll~~a~~~~~~iI~D 230 (468)
T PLN02450 157 -GVEIVPIHCSSSNGFQIT----ESALEEAYQQAQKLNLKVKGVLITNPSNPLG-TTTTRTELNLLVDFITAKNIHLISD 230 (468)
T ss_pred -CcEEEEEecCCccCCcCC----HHHHHHHHHHHHhcCCCeeEEEEecCCCCCC-cccCHHHHHHHHHHHHHCCcEEEEE
Confidence 223333332111222222 35666665421 122455444444455666 5678999999999999999999999
Q ss_pred CcccCccCCCCCCccc-ccc-----------CCCcceeeeccccc-CccceEEEEeCHH-HHHhhcccccccCCCCcHHH
Q 011777 292 EVQTGFGRTGSHYWGF-ETQ-----------GVIPDIVTMAKGIG-NGLPLGAVVTTPE-IANVMAQKIQFNTFGGNPVC 357 (477)
Q Consensus 292 Ev~~gfgr~G~~~~~~-~~~-----------gv~pDivt~sK~lg-~G~pig~v~~~~~-~~~~~~~~~~~~t~~~~~~~ 357 (477)
|+|.++-+.+..+... ... +...-+-+|||.++ +|+|+||++++++ +.+.+..... ....+.++
T Consensus 231 E~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~li~~~~~l~~~~~~~~~--~~~~s~~~ 308 (468)
T PLN02450 231 EIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPGFRVGAIYSNDEMVVSAATKMSS--FGLVSSQT 308 (468)
T ss_pred ccccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEeccccCCCCCccEEEEEECCHHHHHHHHHHhh--cCCCCHHH
Confidence 9999875554222111 111 11112337999998 7999999999854 5555543321 12357788
Q ss_pred HHHHHHHHHhhch-hhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHH-H
Q 011777 358 SAGGLAVLRVIDK-ERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLR-E 435 (477)
Q Consensus 358 ~aaa~a~l~~l~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~ 435 (477)
+.++.++|+.-.- +.+.+..++..+..++.+.+...++++.......|+++|+.+..... ...-....++.+.++ +
T Consensus 309 Q~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~gi~~~~~~~g~flwi~l~~~~~--~~~~~~~~~l~~~ll~~ 386 (468)
T PLN02450 309 QYLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAAGIKCLKSNAGLFCWVDMRHLLK--SNTFEAEMELWKKIVYE 386 (468)
T ss_pred HHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCCceEEEEEEchHhcC--cCCchHHHHHHHHHHHh
Confidence 8888887753210 11222222222333333333333444322223346688888742111 011112234555555 5
Q ss_pred cCceeeccCCC----CCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 436 LGVLVGKGGLH----GNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 436 ~Gv~v~~~~~~----~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
.||.+.||..+ .+++||+... .+++++++++++|.+++.+
T Consensus 387 ~gV~v~PG~~f~~~~~g~~Rl~f~~-~~~~~l~~~l~ri~~~l~~ 430 (468)
T PLN02450 387 VKLNISPGSSCHCTEPGWFRVCFAN-MSEETLDLAMKRLKSFVES 430 (468)
T ss_pred CCEEEeCccccCCCCCCEEEEEecC-CCHHHHHHHHHHHHHHHHh
Confidence 79999998543 3689997543 4789999999999998764
No 202
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.90 E-value=7.8e-22 Score=201.85 Aligned_cols=347 Identities=12% Similarity=0.026 Sum_probs=202.0
Q ss_pred EEEeecCCcccccCCCCC--HHHHHHHHHHHhhcc-------ccccccCChHHHHHHHHHHhhC--CCCCCEEEEeCChH
Q 011777 97 RYLDAFAGIVTVSCGHCH--PDVLNAIFEQSKLLQ-------HATTIYLHHAIADFAEALASKM--PGNLKVVYFVNSGT 165 (477)
Q Consensus 97 ~ylD~~~g~~~~~lGh~~--p~v~~Av~~~l~~~~-------~~~~~~~~~~~~~l~~~La~~~--~~~~~~v~~~~sGs 165 (477)
..+||..|... + ... +.+.+++.+.+.... +....+..+.++.+++++.+.. +.+.++|++|+|++
T Consensus 31 ~~i~l~~g~p~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~I~it~Ga~ 107 (416)
T PRK09440 31 GAIMLGGGNPA--H-IPEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPQNIALTNGSQ 107 (416)
T ss_pred CceeccCCCCC--c-cCCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccChH
Confidence 35788766542 1 121 356666666554311 1111222345556666665443 34567899999999
Q ss_pred HHHHHHHHHHHhc---cCCceEEE-EccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHH
Q 011777 166 EANELAMLMARLS---TGNLGMIA-LRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQ 241 (477)
Q Consensus 166 eA~~~Al~~ar~~---~~~~~ii~-~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le 241 (477)
+|+..++++.... ..++.|++ .+++|+++...+......... +...++.+.. ...++.| +++++
T Consensus 108 ~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~-------~~~~~~~~~~-~~~~~~d----~~~l~ 175 (416)
T PRK09440 108 SAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSY-------RPNIELLPEG-QFKYHVD----FEHLH 175 (416)
T ss_pred HHHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhccCceeec-------cccccccccc-ccccCCC----HHHcc
Confidence 9999998865431 12467888 699999876533221110000 0011111110 0011111 24444
Q ss_pred HHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCcccc--ccCCCcceeee
Q 011777 242 DHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFE--TQGVIPDIVTM 319 (477)
Q Consensus 242 ~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~--~~gv~pDivt~ 319 (477)
+. .+++++++...+|++| .+.+.+.+++|.++|++|+++||+||+|..+-... .+.... ..+...-+.+|
T Consensus 176 --~~----~~~~~i~l~~P~NPTG-~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~-~~~~~~~~~~~~vI~~~Sf 247 (416)
T PRK09440 176 --ID----EDTGAICVSRPTNPTG-NVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGI-IFSEATPLWNPNIILCMSL 247 (416)
T ss_pred --cC----CCceEEEEecCCCCCC-ccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCCc-chhhcCccccCCeEEEecc
Confidence 12 2445555544456777 45688999999999999999999999996431111 011110 01222234479
Q ss_pred cccccCccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhh-----HHHHHHHHHHHHHHHHHHHHHh
Q 011777 320 AKGIGNGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKER-----RQAHCADVGSHLLGRLRTLQER 394 (477)
Q Consensus 320 sK~lg~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~-----~~~~~~~~~~~l~~~L~~l~~~ 394 (477)
||....|+|+||+++++++++.+........++.+.+.+.++.++|+.-+-.. +.+.++++.+.+++.|.+....
T Consensus 248 SK~~~pGlRiG~~i~~~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~l~~ 327 (416)
T PRK09440 248 SKLGLPGVRCGIVIADEEIIEALSNMNGIISLAPGRLGPAIAAEMIESGDLLRLSETVIRPFYRQKVQLAIALLRRYLPD 327 (416)
T ss_pred cccCCCcceEEEEeCCHHHHHHHHHHHHHhccCCCcHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 99744699999999999999888765444456678889999888886322111 1222333334444444333211
Q ss_pred CCCceeeec-cceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCC-----------CCEEEEeCCCCCcHHH
Q 011777 395 HDIIGDVRG-RGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLH-----------GNVFRIKPPMCFTKDD 462 (477)
Q Consensus 395 ~~~~~~v~g-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~-----------~~~iRi~p~~~~t~e~ 462 (477)
.+ +...++ .|+++|+++.... ....++.+.|.++||.+.|+..+ .+++||+.+ .++++
T Consensus 328 ~~-~~~~~p~gg~fiw~~~~~~~-------~~~~~~~~~l~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~--~~~~~ 397 (416)
T PRK09440 328 EP-CLIHKPEGAIFLWLWFKDLP-------ITTEELYQRLKARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYV--QDDEE 397 (416)
T ss_pred CC-eEEecCCCceEEEEECCCCC-------CCHHHHHHHHHHCCEEEechHhhCCCCccccCCcCceEEEEec--CCHHH
Confidence 11 222334 3788888773210 11356777888999999987433 248999754 47999
Q ss_pred HHHHHHHHHHHHhh
Q 011777 463 ADFLVDALDYSMSK 476 (477)
Q Consensus 463 i~~~l~~l~~~l~~ 476 (477)
+++++++|.+++++
T Consensus 398 l~~~i~~l~~~~~~ 411 (416)
T PRK09440 398 IEKGIAILAEEVEK 411 (416)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998864
No 203
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.90 E-value=1e-21 Score=195.03 Aligned_cols=314 Identities=16% Similarity=0.130 Sum_probs=196.6
Q ss_pred CCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHH
Q 011777 94 NGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAML 173 (477)
Q Consensus 94 dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~ 173 (477)
+|..++||..+.. +++ .+|.+.+++.+.+.... ...|+.....+|++.++++++.+.++|++|+|+++++..+++
T Consensus 16 ~~~~~i~l~~~~~--~~~-~~~~~~~~~~~~~~~~~--~~~Y~~~g~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~ 90 (337)
T PRK03967 16 EGNYRIWLDKNEN--PFD-LPEELKEEIFEELKRVP--FNRYPHITSDPLREAIAEFYGLDAENIAVGNGSDELISYLVK 90 (337)
T ss_pred CCCceEEecCCCC--CCC-CCHHHHHHHHHHhhcCc--cccCCCCCHHHHHHHHHHHhCcCcceEEEcCCHHHHHHHHHH
Confidence 4556788877653 454 46889999988775421 223554456788888998887777899999999999987766
Q ss_pred HHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCee
Q 011777 174 MARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVA 253 (477)
Q Consensus 174 ~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a 253 (477)
.. .++.|++.+++|..+....... |...+.++.. ..+..| .+++++.+. +...
T Consensus 91 ~~----~gd~V~v~~P~y~~~~~~~~~~-------------g~~~~~v~~~--~~~~~d----~~~l~~~~~----~~~~ 143 (337)
T PRK03967 91 LF----EGKHIVITPPTFGMYSFYAKLN-------------GIPVIDVPLK--EDFTID----GERIAEKAK----NASA 143 (337)
T ss_pred Hh----CCCeEEEeCCChHHHHHHHHHc-------------CCeEEEeecC--CCCCcC----HHHHHHhcc----CCCE
Confidence 43 4678999999997543322111 2222222211 112212 355655432 2224
Q ss_pred EEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCcc-ccccCCCcceeeeccccc-CccceEE
Q 011777 254 GFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWG-FETQGVIPDIVTMAKGIG-NGLPLGA 331 (477)
Q Consensus 254 ~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~-~~~~gv~pDivt~sK~lg-~G~pig~ 331 (477)
.+++.| +|++|.+.+ .++|.++++ +++++|+||+|.+|.. . .... .+......-+-+|||.++ .|+|+||
T Consensus 144 v~~~~P-~NPtG~~~~----~~~l~~i~~-~~~~ii~De~y~~~~~-~-~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~ 215 (337)
T PRK03967 144 VFICSP-NNPTGNLQP----EEEILKVLE-TGKPVVLDEAYAEFSG-K-SLIGLIDEYPNLILLRTFSKAFGLAGIRAGY 215 (337)
T ss_pred EEEeCC-CCCCCCCCC----HHHHHHHHh-cCCEEEEECchhhhcc-c-chHHHHhhCCCEEEEecchHhhcchhhhhee
Confidence 445555 666675554 456666774 7999999999998742 1 2211 111111222336999999 7999999
Q ss_pred EEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhch-hhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEE
Q 011777 332 VVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDK-ERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGM 410 (477)
Q Consensus 332 v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i 410 (477)
+++++++++.+.... ..++.+.+++.++.++|+..+. .+..+...+..+.+.+.|. ++ ..++.|.++|+
T Consensus 216 iv~~~~~i~~~~~~~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~----~~----~~~~~~~~~~~ 285 (337)
T PRK03967 216 AIANEEIIDALYRIK--PPFSLNILTMKIVRLALDHYDLIEERIDYIIKERERVRRELG----EY----AYPSDANFLLL 285 (337)
T ss_pred eecCHHHHHHHHhhc--CCCCCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhc----cC----cCCCCCcEEEE
Confidence 999999998887543 3466788899998888863111 1112222233333333332 22 12355777776
Q ss_pred EEeeCCCCCCccHHHHHHHHHHHHHcCceeeccC-CCCCEEEEeCCCCCcHHHHHHHHHHHHHHHh
Q 011777 411 ELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGG-LHGNVFRIKPPMCFTKDDADFLVDALDYSMS 475 (477)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~-~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~ 475 (477)
.+ .+.+.|+++||.+.++. ...+++||+.. +.++.+++++.|+++++
T Consensus 286 ~~---------------~~~~~l~~~gi~v~~~~~~~~~~~Ri~~~---~~~~~~~l~~~l~~~~~ 333 (337)
T PRK03967 286 KL---------------DAYDYLLENGIVVRKLSGRLEGHIRVTVG---KREENDEFIKALKEIKE 333 (337)
T ss_pred hH---------------HHHHHHHHCCEEEEeCCCCCCCeEEEecC---CHHHHHHHHHHHHHHHH
Confidence 54 16688889999997653 23578999543 67888888888887764
No 204
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.90 E-value=1.1e-20 Score=192.76 Aligned_cols=332 Identities=16% Similarity=0.077 Sum_probs=212.6
Q ss_pred CCEEEeecCCcccccCCCCCHHHHHHHHHHHhhccc-c-cccc-----CChHHHHHHHHHHhhCCC-CCCEEEEeCChHH
Q 011777 95 GRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQH-A-TTIY-----LHHAIADFAEALASKMPG-NLKVVYFVNSGTE 166 (477)
Q Consensus 95 G~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~-~-~~~~-----~~~~~~~l~~~La~~~~~-~~~~v~~~~sGse 166 (477)
+..|||..+.. ..++.|++++.+.+..... . ...+ ..+...++++.++++++. +.++|+|++|+||
T Consensus 23 ~~iYld~a~~~------~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~ 96 (406)
T PRK09295 23 PLAYLDSAASA------QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINARSAEELVFVRGTTE 96 (406)
T ss_pred ceEEEeCcccc------cCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHH
Confidence 45899976543 3688999999988865321 1 1111 124467888999999875 5678999999999
Q ss_pred HHHHHHHHHH--hccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHH
Q 011777 167 ANELAMLMAR--LSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHI 244 (477)
Q Consensus 167 A~~~Al~~ar--~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i 244 (477)
++..+++... ...+++.||+.+..||+.......... ..|+....++.......+ .+++++++
T Consensus 97 ~l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~---------~~g~~v~~v~~~~~~~~d------~~~l~~~i 161 (406)
T PRK09295 97 GINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCA---------RVGAELRVIPLNPDGTLQ------LETLPALF 161 (406)
T ss_pred HHHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHH---------HcCcEEEEEecCCCCCCC------HHHHHHhc
Confidence 9998887532 223567888888777764322111100 012222222211111111 47787777
Q ss_pred hccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCcceeeec--cc
Q 011777 245 DFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMA--KG 322 (477)
Q Consensus 245 ~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~s--K~ 322 (477)
+ +++++|++..+++++|.+.+ +++|.++|+++|+++|+|++|+ +|.. . ++.....+|++++| |.
T Consensus 162 ~----~~t~lv~l~~~~n~tG~~~~----~~~i~~~~~~~~~~vivD~a~~-~g~~---~--~~~~~~~~D~~~~s~~K~ 227 (406)
T PRK09295 162 D----ERTRLLAITHVSNVLGTENP----LAEMIALAHQHGAKVLVDGAQA-VMHH---P--VDVQALDCDFYVFSGHKL 227 (406)
T ss_pred C----CCcEEEEEecchhcccccCC----HHHHHHHHHHcCCEEEEEcccc-cCcc---c--cCchhcCCCEEEeehhhc
Confidence 5 35778888888888998887 8999999999999999999996 4432 2 22223456777655 95
Q ss_pred ccCccceEEEEeCHHHHHhhcccccc----------------------cCCCCcHHHHHHHHHHHHhhch---hhHHHHH
Q 011777 323 IGNGLPLGAVVTTPEIANVMAQKIQF----------------------NTFGGNPVCSAGGLAVLRVIDK---ERRQAHC 377 (477)
Q Consensus 323 lg~G~pig~v~~~~~~~~~~~~~~~~----------------------~t~~~~~~~~aaa~a~l~~l~~---~~~~~~~ 377 (477)
+| ...+|++++++++++.+.....+ -+-+.|..++.+..++++.+.+ +...++.
T Consensus 228 ~g-p~G~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~ 306 (406)
T PRK09295 228 YG-PTGIGILYVKEALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYE 306 (406)
T ss_pred cC-CCCcEEEEEchHhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHH
Confidence 55 23589999999987765421110 1113567777888888887755 3455666
Q ss_pred HHHHHHHHHHHHHHHHhCCCceee--eccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCC----------
Q 011777 378 ADVGSHLLGRLRTLQERHDIIGDV--RGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGL---------- 445 (477)
Q Consensus 378 ~~~~~~l~~~L~~l~~~~~~~~~v--~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~---------- 445 (477)
+++.++++++|.++ +.+.-. ...+.++.+.+.. ....++.+.|.++||.+..+..
T Consensus 307 ~~l~~~l~~~l~~~----~~~~~~~~~~~~~iv~~~~~~---------~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~ 373 (406)
T PRK09295 307 QNLMHYALSQLESV----PDLTLYGPQNRLGVIAFNLGK---------HHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYN 373 (406)
T ss_pred HHHHHHHHHHHhcC----CCEEEeCCCCCceEEEEEECC---------cCHHHHHHHHHhCCeEEeccccchHHHHHHHC
Confidence 66666776666553 211111 1123344554421 1134567788889999976521
Q ss_pred CCCEEEEeCCCCCcHHHHHHHHHHHHHHHh
Q 011777 446 HGNVFRIKPPMCFTKDDADFLVDALDYSMS 475 (477)
Q Consensus 446 ~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~ 475 (477)
..+++|++++...|++|||.+++.|+++..
T Consensus 374 ~~~~iRiS~~~ynt~~did~l~~~l~~i~~ 403 (406)
T PRK09295 374 VPAMCRASLAMYNTHEEVDRLVAGLQRIHR 403 (406)
T ss_pred CCCEEEEEccCCCCHHHHHHHHHHHHHHHH
Confidence 135799999999999999999999988753
No 205
>PRK08354 putative aminotransferase; Provisional
Probab=99.90 E-value=4.9e-21 Score=188.11 Aligned_cols=302 Identities=15% Similarity=0.104 Sum_probs=196.4
Q ss_pred CCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHH
Q 011777 93 ENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAM 172 (477)
Q Consensus 93 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al 172 (477)
.+...+|||..+. ++++ +|.+.+++.+.++... .|+ ....+.++++++++ ++|++|+|++||+..++
T Consensus 5 ~~~~~~i~l~~~~--np~~--p~~~~~a~~~~~~~~~----~yp--~~~~l~~~ia~~~~---~~I~vt~G~~~al~~~~ 71 (311)
T PRK08354 5 IREEGLIDFSASV--NPYP--PEWLDEMFERAKEISG----RYT--YYEWLEEEFSKLFG---EPIVITAGITEALYLIG 71 (311)
T ss_pred CCccceeEecCCC--CCCC--CHHHHHHHHHHHHHhh----cCC--ChHHHHHHHHHHHC---CCEEECCCHHHHHHHHH
Confidence 3445689998764 4454 5889999987765421 233 24678889998885 36999999999998776
Q ss_pred HHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCe
Q 011777 173 LMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKV 252 (477)
Q Consensus 173 ~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~ 252 (477)
.+. .+++.|++.+++|.++...+...+. ..+..+ . | .+.+++.++ +..
T Consensus 72 ~~~---~~gd~vlv~~P~y~~~~~~~~~~g~-------------~~~~~~------~--d----~~~l~~~~~----~~~ 119 (311)
T PRK08354 72 ILA---LRDRKVIIPRHTYGEYERVARFFAA-------------RIIKGP------N--D----PEKLEELVE----RNS 119 (311)
T ss_pred Hhh---CCCCeEEEeCCCcHHHHHHHHHcCC-------------EEeecC------C--C----HHHHHHhhc----CCC
Confidence 432 2567899999999887655443322 111111 1 1 366776654 233
Q ss_pred eEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCcceeeeccccc-CccceEE
Q 011777 253 AGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIG-NGLPLGA 331 (477)
Q Consensus 253 a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg-~G~pig~ 331 (477)
..++++|. |++| ...+.+.+++|.++|++||+++|+||+|.+|...+ ... . .....-+-+|||.++ .|+|+||
T Consensus 120 ~vi~~~P~-NPTG-~~~~~~~l~~l~~~a~~~~~~li~De~y~~f~~~~-~~~--~-~~~vi~~~S~SK~~~l~GlRiG~ 193 (311)
T PRK08354 120 VVFFCNPN-NPDG-KFYNFKELKPLLDAVEDRNALLILDEAFIDFVKKP-ESP--E-GENIIKLRTFTKSYGLPGIRVGY 193 (311)
T ss_pred EEEEecCC-CCCC-CccCHHHHHHHHHHhhhcCcEEEEeCcchhccccc-ccc--C-CCcEEEEeccHhhcCCccceeee
Confidence 57777885 5666 46688999999999999999999999999886544 211 1 122222347999999 7999999
Q ss_pred EEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEE
Q 011777 332 VVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGME 411 (477)
Q Consensus 332 v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~ 411 (477)
+++ +.+.+.... ..+..+..+++++.+.++ +. .+++++..+++++..+.+.... ...+.|.|++++
T Consensus 194 ~v~---~~~~l~~~~--~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~l~~~l----~~~~~~~~~~~~ 259 (311)
T PRK08354 194 VKG---FEEAFRSVR--MPWSIGSTGYAFLEFLIE----DD-FEHLRKTMPLIWREKERFEKAL----YVKSDANFFIKD 259 (311)
T ss_pred eee---hHHHHHHcC--CCccCCHHHHHHHHHHHH----hH-HHHHHHHHHHHHHHHHHHHHhc----CCCCCCcEEEEE
Confidence 998 344444332 234445555555555443 11 2344444444555444432221 124567776665
Q ss_pred EeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCC--CCEEEEeCCCCCcHHHHHHHHHHHHHH
Q 011777 412 LVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLH--GNVFRIKPPMCFTKDDADFLVDALDYS 473 (477)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~--~~~iRi~p~~~~t~e~i~~~l~~l~~~ 473 (477)
+. + ..++.+.|+++||.+.++..+ .+++||+.. ++++.+++++.|+++
T Consensus 260 ~~--------~---~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~~---~~~~~~~l~~al~~~ 309 (311)
T PRK08354 260 VG--------D---AEKFVEFLKRNGILVRDCTSFGLPGYIRFSVR---DREENEKLIRALREW 309 (311)
T ss_pred CC--------C---HHHHHHHHHHCCeEEEecccCCCCCeEEEEeC---CHHHHHHHHHHHHHh
Confidence 41 1 346888899999999998654 378999543 567788888888765
No 206
>PRK07908 hypothetical protein; Provisional
Probab=99.90 E-value=4.8e-21 Score=191.38 Aligned_cols=314 Identities=13% Similarity=0.104 Sum_probs=196.4
Q ss_pred CCEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccccCC-hHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHH
Q 011777 95 GRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIYLH-HAIADFAEALASKMPGNLKVVYFVNSGTEANELAML 173 (477)
Q Consensus 95 G~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~~~-~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~ 173 (477)
+..++||..+.. +++ .++.+.+++.+.+.... .|.. ....++++.++++++.+.++|++|+|++||+..+++
T Consensus 21 ~~~~~~l~~~~~--~~~-~~~~~~~~~~~~~~~~~----~Y~~~~g~~~lr~aia~~~~~~~~~I~it~Ga~~al~~~~~ 93 (349)
T PRK07908 21 GPGLLDFAVNVR--HDT-PPEWLRERLAARLGDLA----AYPSTEDERRARAAVAARHGRTPDEVLLLAGAAEGFALLAR 93 (349)
T ss_pred CCCeEEecCCCC--CCC-CCHHHHHHHHHHhhHhh----cCCCccchHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHh
Confidence 568999987663 344 57889999998876432 2332 346678888888887777899999999999998877
Q ss_pred HHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCee
Q 011777 174 MARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVA 253 (477)
Q Consensus 174 ~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a 253 (477)
. .+ +++++..++|.+........ |...+.+|... .++.| .++ ++ .+++
T Consensus 94 -l---~~-~~viv~~P~y~~~~~~~~~~-------------G~~i~~v~~~~--~~~~d----~~~----l~----~~~~ 141 (349)
T PRK07908 94 -L---RP-RRAAVVHPSFTEPEAALRAA-------------GIPVHRVVLDP--PFRLD----PAA----VP----DDAD 141 (349)
T ss_pred -c---CC-CeEEEeCCCChHHHHHHHHc-------------CCEEEeeccCc--ccCcC----hhH----hc----cCCC
Confidence 2 23 56777888887654322221 22332222211 12211 122 22 2345
Q ss_pred EEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCccee---eeccccc-Cccce
Q 011777 254 GFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIV---TMAKGIG-NGLPL 329 (477)
Q Consensus 254 ~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDiv---t~sK~lg-~G~pi 329 (477)
++++...++++|.+.+ .++|.++|++ +.++|+||+|..|. .+ ....+...+. ++++ +|||.++ .|+|+
T Consensus 142 ~i~l~np~NPTG~~~~----~~~l~~l~~~-~~~iIvDe~y~~~~-~~-~~~~l~~~~~-~~~i~i~S~SK~~~l~GlRi 213 (349)
T PRK07908 142 LVVIGNPTNPTSVLHP----AEQLLALRRP-GRILVVDEAFADAV-PG-EPESLAGDDL-PGVLVLRSLTKTWSLAGLRV 213 (349)
T ss_pred EEEEcCCCCCCCCCcC----HHHHHHHHhc-CCEEEEECcchhhc-cC-CccccccccC-CCEEEEeecccccCCcccee
Confidence 5555444566776665 4567777864 78888999998773 23 2222211111 2333 6899999 79999
Q ss_pred EEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhch---hhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccce
Q 011777 330 GAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDK---ERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGL 406 (477)
Q Consensus 330 g~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~ 406 (477)
||+++++++++.+..... .+..+++.++++.+.++-... ++..++++++.+++.+.|++ ++........|.
T Consensus 214 G~~~~~~~~~~~~~~~~~--~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~----~~~~~~~p~~g~ 287 (349)
T PRK07908 214 GYALGAPDVLARLTRGRA--HWPVGTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRA----VGARVVDPAAAP 287 (349)
T ss_pred eeeecCHHHHHHHHhcCC--CCCccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHh----CCcEeccCCCce
Confidence 999999999988875432 245566666665555441100 12233344444444444433 332212224588
Q ss_pred eEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCC----CCEEEEeCCCCCcHHHHHHHHHHHHHHHh
Q 011777 407 MVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLH----GNVFRIKPPMCFTKDDADFLVDALDYSMS 475 (477)
Q Consensus 407 ~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~----~~~iRi~p~~~~t~e~i~~~l~~l~~~l~ 475 (477)
++|+.+. . ...+.+.|+++||.+.++..+ .+++||++ .+++++++++++|++++.
T Consensus 288 ~~~~~~~--------~---~~~~~~~l~~~gI~v~~g~~f~~~~~~~vRis~---~~~~~~~~l~~al~~~~~ 346 (349)
T PRK07908 288 FVLVRVP--------D---AELLRKRLRERGIAVRRGDTFPGLDPDYLRLAV---RPRAEVPVLVQALAEILK 346 (349)
T ss_pred EEEEECC--------c---HHHHHHHHHhCCEEEEECCCCCCCCCCeEEEEe---CCCccHHHHHHHHHHHHh
Confidence 8888762 1 346788889999999987543 47999975 478899999999998765
No 207
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.90 E-value=1.1e-21 Score=199.36 Aligned_cols=340 Identities=14% Similarity=0.078 Sum_probs=198.3
Q ss_pred EEEeecCCcccccCCCCC--HHHHHHHHHHHhhc---cccccccCChHHHHHHHHHHhhCC--CCCCEE--EEeCChHHH
Q 011777 97 RYLDAFAGIVTVSCGHCH--PDVLNAIFEQSKLL---QHATTIYLHHAIADFAEALASKMP--GNLKVV--YFVNSGTEA 167 (477)
Q Consensus 97 ~ylD~~~g~~~~~lGh~~--p~v~~Av~~~l~~~---~~~~~~~~~~~~~~l~~~La~~~~--~~~~~v--~~~~sGseA 167 (477)
..|||..|....+-++.+ +.+.+++.+.++.. .|....+..+.++.+++++.+... .+.++| ++|+|+++|
T Consensus 27 ~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~i~v~iT~Ga~~a 106 (396)
T PRK09257 27 DKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKNYLPIEGLAAYRQAVQELLFGADSPALAAGRVATVQTPGGTGA 106 (396)
T ss_pred CcEecceeeEECCCCCEeccHHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHHhcCCCCcccccCeEEEEecCCccHH
Confidence 457888776433323333 67888877765432 122223334455555655544322 145666 999999999
Q ss_pred HHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhcc
Q 011777 168 NELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFG 247 (477)
Q Consensus 168 ~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~ 247 (477)
+..++++.....+++.|++.+++|.++.......+ ...+++|......++.| .+++++.++..
T Consensus 107 l~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~~~g-------------~~~v~v~~~~~~~~~~d----~~~l~~~~~~~ 169 (396)
T PRK09257 107 LRVGADFLKRAFPDAKVWVSDPTWPNHRAIFEAAG-------------LEVKTYPYYDAATKGLD----FDAMLADLSQA 169 (396)
T ss_pred HHHHHHHHHHhCCCCeEEECCCCcccHHHHHHHcC-------------CcEEEEeccccccCccC----HHHHHHHHHhC
Confidence 99998755433467899999999998865544432 22222221000011111 47777777632
Q ss_pred CCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCC-Cccc---cc-cCCCcceeeeccc
Q 011777 248 TSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSH-YWGF---ET-QGVIPDIVTMAKG 322 (477)
Q Consensus 248 ~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~-~~~~---~~-~gv~pDivt~sK~ 322 (477)
..+..++++...||++| .+++++.+++|.++|++||+++|+||+|.+|...... ...+ .. .+...-+-+|||.
T Consensus 170 -~~~~~~~i~~~p~NPTG-~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~ 247 (396)
T PRK09257 170 -PAGDVVLLHGCCHNPTG-ADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVASSFSKN 247 (396)
T ss_pred -CCCCEEEEeCCCCCCCC-CCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcEEEEEEcCCc
Confidence 22334555455666677 5668999999999999999999999999988643101 1111 11 1122234479999
Q ss_pred ccC-ccceEEEEe---CHH----HHHhhcccccccCCCCcHHHHHHHHHHHHhhch----hhHHHHHHHHHHHHHHHHHH
Q 011777 323 IGN-GLPLGAVVT---TPE----IANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDK----ERRQAHCADVGSHLLGRLRT 390 (477)
Q Consensus 323 lg~-G~pig~v~~---~~~----~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~----~~~~~~~~~~~~~l~~~L~~ 390 (477)
++. |+|+||+++ +++ ++..+.........+.+++.+.++.+.|+.-.- +++++++++..+..++.+.+
T Consensus 248 ~~~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~l~~ 327 (396)
T PRK09257 248 FGLYGERVGALSVVAEDAEEADRVLSQLKATIRTNYSNPPAHGAAIVATILNDPELRAEWEAELEEMRERIKAMRQLLVE 327 (396)
T ss_pred CccccccceeEEEEeCCHHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 995 999999973 444 333333222223344577888777777753210 22223333333333333333
Q ss_pred HHHhCC---Ccee-eeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHHH
Q 011777 391 LQERHD---IIGD-VRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADFL 466 (477)
Q Consensus 391 l~~~~~---~~~~-v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~ 466 (477)
..+++. .+.. .+..|+++|+.+. ...+.+.+.++||.+.|. + ||+++ ..++++|+++
T Consensus 328 ~L~~~~~~~~~~~~~p~gg~~~w~~l~------------~~~~~~l~~~~~V~~~p~----~--ri~~~-~~~~~~i~~~ 388 (396)
T PRK09257 328 ALKAKGPSRDFDFIARQRGMFSYSGLT------------PEQVDRLREEFGVYAVGS----G--RINVA-GLNESNIDYV 388 (396)
T ss_pred HHHhcCCCCCcccccccceEEEecCCC------------HHHHHHHHHcCCEEEcCC----C--eEEEe-eCCHHHHHHH
Confidence 333332 1222 2334677777651 123455567789998763 2 88653 3789999999
Q ss_pred HHHHHHHH
Q 011777 467 VDALDYSM 474 (477)
Q Consensus 467 l~~l~~~l 474 (477)
+++|.+++
T Consensus 389 ~~~i~~~~ 396 (396)
T PRK09257 389 AEAIAAVL 396 (396)
T ss_pred HHHHHhhC
Confidence 99998764
No 208
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.90 E-value=8.7e-22 Score=197.61 Aligned_cols=297 Identities=14% Similarity=0.115 Sum_probs=188.8
Q ss_pred cCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCC
Q 011777 135 YLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQG 214 (477)
Q Consensus 135 ~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~ 214 (477)
|+.+...+|++.|+++++.+.++|++++|+++++..+++.... .+++.|++.+++|..+.......
T Consensus 56 Y~~~~~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~~~-~g~~~vlv~~p~y~~~~~~~~~~------------- 121 (364)
T PRK04781 56 YPDPQPPGLRSALAALYGCAPEQLLIGRGSDEAIDLLVRALCV-PGRDAVLVTPPVFGMYAVCARLQ------------- 121 (364)
T ss_pred CCCCCHHHHHHHHHHHhCcChHHEEEeCCHHHHHHHHHHHhcC-CCCCeEEEcCCChHHHHHHHHHc-------------
Confidence 4444567899999998877778999999999999998875532 23367787777765332221111
Q ss_pred CeeeecCCCC-cCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCc
Q 011777 215 EIHHVVNPDP-YHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEV 293 (477)
Q Consensus 215 ~~~~~~~~~~-~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv 293 (477)
|...+.+|.. ....+..| .+++++.+. ..++++|++...++++|.+. +.+.++++.+.|+ +++++|+||+
T Consensus 122 g~~~~~v~~~~~~~~~~~d----~~~l~~~~~---~~~~~lv~l~~p~NPTG~~~-~~~~~~~l~~~~~-~~~~iI~Dea 192 (364)
T PRK04781 122 NAPLVEVPLVDGADGFHAD----VPAIVAAAL---ASNAKLVFLCSPSNPAGSAI-ALDQIERALQALQ-GKALVVVDEA 192 (364)
T ss_pred CCEEEEEecCCCccCCCcC----HHHHHHHHh---ccCCeEEEEcCCCCCCCCCc-CHHHHHHHHHhCC-CCcEEEEeCc
Confidence 2222222211 00111111 244433322 23556666656667777544 6777777777775 4799999999
Q ss_pred ccCccCCCCCCcc-ccccCCCcceeeeccccc-CccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhchh
Q 011777 294 QTGFGRTGSHYWG-FETQGVIPDIVTMAKGIG-NGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDKE 371 (477)
Q Consensus 294 ~~gfgr~G~~~~~-~~~~gv~pDivt~sK~lg-~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~ 371 (477)
|..|.... .... .+..+...-+-||||.+| .|+|+||+++++++++.+.... ..++.+.+++.++.++|+.-..+
T Consensus 193 y~~f~~~~-~~~~~~~~~~~vi~~~SfSK~~gl~GlRvGy~v~~~~l~~~l~~~~--~~~~~~~~~~~~a~~~l~~~~~~ 269 (364)
T PRK04781 193 YGEFSDVP-SAVGLLARYDNLAVLRTLSKAHALAAARIGSLIANAELIAVLRRCQ--APYPVPTPCAALAEQALSAPALA 269 (364)
T ss_pred chhhcCCc-chHHHHhhCCCEEEEecChhhcccccceeeeeeCCHHHHHHHHhcc--CCCCCCHHHHHHHHHHHhcccHH
Confidence 99885422 1111 122222223447999999 7999999999999999887643 45677888888888877642112
Q ss_pred h---HHHHHHHHHHHHHHHHHHHHHhCCCc-eeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCC--
Q 011777 372 R---RQAHCADVGSHLLGRLRTLQERHDII-GDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGL-- 445 (477)
Q Consensus 372 ~---~~~~~~~~~~~l~~~L~~l~~~~~~~-~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~-- 445 (477)
. ..+.+++.++.+.+.|+ +++.+ ...+..|+++|+++. . ..++.+.|.++||.+.++..
T Consensus 270 ~~~~~~~~~~~~r~~l~~~L~----~~~~~~~~~p~~g~f~~~~~~--------~---~~~~~~~l~~~gI~v~~~~~~~ 334 (364)
T PRK04781 270 VTARRVAEVRAERERLHAALA----QLPGVRRVYPSQGNFLLVRFD--------D---AEAAFQALLAAGVVVRDQRAAP 334 (364)
T ss_pred HHHHHHHHHHHHHHHHHHHHH----hCCCCCeECCCCCcEEEEEcC--------C---HHHHHHHHHHCCeEEeeCCCCC
Confidence 2 22333444444444443 34322 234567899898762 1 35678889999999998743
Q ss_pred -CCCEEEEeCCCCCcHHHHHHHHHHHHHHHh
Q 011777 446 -HGNVFRIKPPMCFTKDDADFLVDALDYSMS 475 (477)
Q Consensus 446 -~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~ 475 (477)
.++++||+. .++++.++++++|+++..
T Consensus 335 ~~~~~~Ris~---~~~~~~~~l~~al~~~~~ 362 (364)
T PRK04781 335 RLSDALRITL---GTPEQNDRVLAALQRTQA 362 (364)
T ss_pred CCCCeEEEeC---CCHHHHHHHHHHHHHHHh
Confidence 257899954 368999999999988654
No 209
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.90 E-value=4.7e-21 Score=196.43 Aligned_cols=312 Identities=15% Similarity=0.146 Sum_probs=188.5
Q ss_pred ChHHHHHHHHHHhhC----CCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCC
Q 011777 137 HHAIADFAEALASKM----PGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIP 212 (477)
Q Consensus 137 ~~~~~~l~~~La~~~----~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~ 212 (477)
.+.+.++++.+.+.+ +.+.++|++|+|+++|++.++.... .+++.|++..+.|.+........
T Consensus 98 ~~LR~aiA~~l~~~~~~~~~v~p~~Ivit~G~t~al~~l~~~l~--~pGD~Vlv~~P~Y~~f~~~~~~~----------- 164 (447)
T PLN02607 98 KSFRQAMASFMEQIRGGKARFDPDRIVLTAGATAANELLTFILA--DPGDALLVPTPYYPGFDRDLRWR----------- 164 (447)
T ss_pred HHHHHHHHHHHHHhcCCCCCcCHHHeEEcCChHHHHHHHHHHhC--CCCCEEEEcCCCCcchHHHHHhc-----------
Confidence 344556666666543 2456789999999999999876543 36788999999998875432211
Q ss_pred CCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhcc--CCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEE
Q 011777 213 QGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFG--TSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIA 290 (477)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~--~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~ 290 (477)
.++..++++.....+|..+ .++++++++.. ...+++++++...+|++| .+++++.+++|.++|++|++.||+
T Consensus 165 -~g~~vv~v~~~~~~~f~~~----~~~le~a~~~a~~~~~~vk~lll~nP~NPtG-~~~s~e~l~~l~~~~~~~~i~lI~ 238 (447)
T PLN02607 165 -TGVKIVPIHCDSSNNFQVT----PQALEAAYQEAEAANIRVRGVLITNPSNPLG-ATVQRSVLEDILDFVVRKNIHLVS 238 (447)
T ss_pred -CCcEEEEEeCCCCCCCcCC----HHHHHHHHHHHHHhCCCeeEEEEeCCCCCcC-cccCHHHHHHHHHHHHHCCCEEEE
Confidence 1233333332211223222 36666666521 123565555544455666 567899999999999999999999
Q ss_pred cCcccCccCCCCCCccc-c---ccCC-C-cc----eeeeccccc-CccceEEEEe-CHHHHHhhcccccccCC-CCcHHH
Q 011777 291 DEVQTGFGRTGSHYWGF-E---TQGV-I-PD----IVTMAKGIG-NGLPLGAVVT-TPEIANVMAQKIQFNTF-GGNPVC 357 (477)
Q Consensus 291 DEv~~gfgr~G~~~~~~-~---~~gv-~-pD----ivt~sK~lg-~G~pig~v~~-~~~~~~~~~~~~~~~t~-~~~~~~ 357 (477)
||+|.++-+.+..+..+ + ..+. . ++ +-+|||.+| .|+|+||+++ ++++.+.+.... .| +.+.++
T Consensus 239 DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~GlRvG~ivs~n~~l~~~~~~~~---~~~~~s~~~ 315 (447)
T PLN02607 239 DEIYSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMS---SFTLVSSQT 315 (447)
T ss_pred eccccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCCCcceEEEEEEcCHHHHHHHHHHh---hcCCCCHHH
Confidence 99999754433122221 1 1110 1 22 236999999 7999999998 677776665432 22 345667
Q ss_pred HHHHHHHHHhhchhhHH-HHHHHHHHHHHH---HHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHH
Q 011777 358 SAGGLAVLRVIDKERRQ-AHCADVGSHLLG---RLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKL 433 (477)
Q Consensus 358 ~aaa~a~l~~l~~~~~~-~~~~~~~~~l~~---~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l 433 (477)
+.++.+.|+ ++++. +.+.++.+++++ .+.+..+++++.......|+|+|+++.... ..+......++++.+
T Consensus 316 q~~~~~~L~---d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~gi~~~~~~ag~fvw~~L~~~~--~~~~~~~e~~l~~~l 390 (447)
T PLN02607 316 QHLLASMLS---DEEFTENYIRTNRERLRKRYEMIVQGLRRAGIECLKGNAGLFCWMNLSPLL--ETPTREGELALWDSI 390 (447)
T ss_pred HHHHHHHhC---CchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCeeEEEEEEchHhh--cCCCchhHHHHHHHH
Confidence 776666654 33332 223333333333 233333344432222334789999984211 011112234566666
Q ss_pred HH-cCceeeccCCC----CCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 434 RE-LGVLVGKGGLH----GNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 434 ~~-~Gv~v~~~~~~----~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
++ .||.+.||..+ .+++|+++.. .+++++++++++|.+++++
T Consensus 391 l~~~gV~v~pG~~f~~~~~g~fRi~fa~-~~~~~l~~gl~Ri~~~l~~ 437 (447)
T PLN02607 391 LREVKLNISPGSSCHCSEPGWFRVCFAN-MSEDTLEVALKRIHRFMDR 437 (447)
T ss_pred HHhCCEEEcCccccCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHH
Confidence 54 79999998543 4799997543 4789999999999998853
No 210
>PLN02231 alanine transaminase
Probab=99.90 E-value=4.3e-21 Score=200.05 Aligned_cols=336 Identities=15% Similarity=0.132 Sum_probs=201.1
Q ss_pred CHHHHHHHHHHHhhc------cccccccCChHHHHHHHHHHhhC--CCCCCEEEEeCChHHHHHHHHHHHHhccCCceEE
Q 011777 114 HPDVLNAIFEQSKLL------QHATTIYLHHAIADFAEALASKM--PGNLKVVYFVNSGTEANELAMLMARLSTGNLGMI 185 (477)
Q Consensus 114 ~p~v~~Av~~~l~~~------~~~~~~~~~~~~~~l~~~La~~~--~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii 185 (477)
+.++++...+.+... .|+...+..+.++.+++++.+.. +.+.++|++|+|+++|+..++++... .+++.|+
T Consensus 142 p~~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~~~l~~-~~gd~Vl 220 (534)
T PLN02231 142 SADAIERAWQILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-SEKDGIL 220 (534)
T ss_pred CHHHHHHHHHHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHHHHHHhcc-CCCCEEE
Confidence 346666666666542 12222334455666666666543 34568999999999999999986642 2468899
Q ss_pred EEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccC--CCCeeE-EEecccCC
Q 011777 186 ALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGT--SGKVAG-FIAETIQG 262 (477)
Q Consensus 186 ~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~--~~~~a~-vi~epi~~ 262 (477)
+..++|.++.......+ ...++++......|+.| .++|++.++... ..++++ ++++| +|
T Consensus 221 i~~P~Y~~y~~~~~~~g-------------~~~v~~~l~~~~~~~~d----~~~Le~~l~~~~~~~~~~k~ivl~nP-~N 282 (534)
T PLN02231 221 CPIPQYPLYSASIALHG-------------GTLVPYYLDEATGWGLE----ISELKKQLEDARSKGITVRALVVINP-GN 282 (534)
T ss_pred EeCCCChhHHHHHHHcC-------------CEEEEEecCcccCCCCC----HHHHHHHHHHHhhcCCCeEEEEEeCC-CC
Confidence 99999998765443332 22222222111122222 477777775321 114554 55555 55
Q ss_pred CCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCC-CCCCccccc----cCC---Cccee---eeccccc--Cccce
Q 011777 263 VGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRT-GSHYWGFET----QGV---IPDIV---TMAKGIG--NGLPL 329 (477)
Q Consensus 263 ~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~-G~~~~~~~~----~gv---~pDiv---t~sK~lg--~G~pi 329 (477)
++| .+++++.+++|.++|++||++||+||+|..+.+. +..+..+.. .|. ...++ +|||++. .|+|+
T Consensus 283 PTG-~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRi 361 (534)
T PLN02231 283 PTG-QVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRG 361 (534)
T ss_pred CCC-cCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccce
Confidence 666 5678999999999999999999999999988664 322222211 111 12234 6899984 59999
Q ss_pred EEEEe---CHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhc--h---h-------hHHHHHHHHHHHHHHHHHHHHHh
Q 011777 330 GAVVT---TPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVID--K---E-------RRQAHCADVGSHLLGRLRTLQER 394 (477)
Q Consensus 330 g~v~~---~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~--~---~-------~~~~~~~~~~~~l~~~L~~l~~~ 394 (477)
||+++ ++++++.+..... .+.+.+.++++++..+++.-. + + ++.+.++++.+.+.+.|+ +
T Consensus 362 Gy~~~~~~~~~l~~~l~k~~~-~~~~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~----~ 436 (534)
T PLN02231 362 GYMEVTGFTSDVREQIYKVAS-VNLCSNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALN----S 436 (534)
T ss_pred EEEEEecCCHHHHHHHHHHHh-hhcCCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHh----c
Confidence 99986 6888887765432 345567788888777774210 0 1 123334444444444443 3
Q ss_pred CCCceeeeccceeEEE-EEeeCCCCCCcc----HHHHHHHHHHHH-HcCceeeccCCCC-----CEEEEeCCCCCcHHHH
Q 011777 395 HDIIGDVRGRGLMVGM-ELVTDRKEKTPA----KAETAVLFEKLR-ELGVLVGKGGLHG-----NVFRIKPPMCFTKDDA 463 (477)
Q Consensus 395 ~~~~~~v~g~g~~~~i-~~~~~~~~~~~~----~~~~~~~~~~l~-~~Gv~v~~~~~~~-----~~iRi~p~~~~t~e~i 463 (477)
++.+...++.|.|+.+ .+.-........ ......++..|+ +.||.+.||..++ +++|++ +..+++++
T Consensus 437 ~~gi~~~~p~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~g~~~~Rit--~~~~~e~l 514 (534)
T PLN02231 437 LEGVTCNKAEGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFRCT--ILPQEDKI 514 (534)
T ss_pred CCCceecCCCeeeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCCCCCeEEEE--eCCCHHHH
Confidence 4444555566655543 332110000000 000123444444 6799999986443 368996 56789999
Q ss_pred HHHHHHHHHHHhh
Q 011777 464 DFLVDALDYSMSK 476 (477)
Q Consensus 464 ~~~l~~l~~~l~~ 476 (477)
++++++|.+++++
T Consensus 515 ~eal~RL~~~~~~ 527 (534)
T PLN02231 515 PAIVSRLTEFHKS 527 (534)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999988754
No 211
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.90 E-value=5e-21 Score=191.62 Aligned_cols=320 Identities=17% Similarity=0.182 Sum_probs=203.7
Q ss_pred CCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCCCC--EEEEeCChHHHHHHHHHHHHhccCCceEEEEccC
Q 011777 113 CHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGNLK--VVYFVNSGTEANELAMLMARLSTGNLGMIALRNA 190 (477)
Q Consensus 113 ~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~~--~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~ 190 (477)
.+|.|.+++... ..+....| .+...++++.|+++++.+.+ .+++++||+++++.++.... .+++++++..++
T Consensus 10 ~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~--~~~~~vi~~~~~ 83 (355)
T TIGR03301 10 TSATVRDAMLVD---WCHWDSEF-NDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLV--PRDGKLLVLING 83 (355)
T ss_pred CCHHHHHHhhhh---ccCCCHHH-HHHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhcc--CCCCeEEEECCC
Confidence 356777776652 22222223 36678899999999876433 68899999999999998653 245677888887
Q ss_pred ccCCcccccc-cccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeC
Q 011777 191 YHGGSSGTIG-LTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVEL 269 (477)
Q Consensus 191 yhG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~ 269 (477)
+++....... ..+. .+..++.+. ....+ .+++++.++. ..++..+++..+++++|.+.+
T Consensus 84 ~~~~~~~~~a~~~g~----------~~~~i~~~~--~~~~d------~~~l~~~l~~--~~~~~~v~~~~~~~~~G~~~~ 143 (355)
T TIGR03301 84 AYGERLAKICEYLGI----------PHTDLNFSE--YEPPD------LNRIEEALAA--DPDITHVATVHHETTTGILNP 143 (355)
T ss_pred chhhHHHHHHHHcCC----------ceEEEecCC--CCCCC------HHHHHHHHHh--CCCceEEEEEecCCcccchhH
Confidence 7765321111 1111 122222111 11111 4788888762 134455554445566777766
Q ss_pred CchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCcceeeecccccCccceEEEEeCHHHHHhhcccc---
Q 011777 270 APGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIGNGLPLGAVVTTPEIANVMAQKI--- 346 (477)
Q Consensus 270 ~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pig~v~~~~~~~~~~~~~~--- 346 (477)
+++|.++|++||+++|+|++++ ||. ..+.+..+++...+.+++|+++++.++|++++++++++.+....
T Consensus 144 ----~~~i~~l~~~~~~~livD~~~s-~g~---~~~~~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~~~~~~~~~~~~~~ 215 (355)
T TIGR03301 144 ----LEAIAKVARSHGAVLIVDAMSS-FGA---IPIDIEELDVDALIASANKCLEGVPGFGFVIARRDLLEASAGNARSL 215 (355)
T ss_pred ----HHHHHHHHHHcCCEEEEEeccc-cCC---cccchhhcCccEEEecCCcccccCCceeEEEECHHHHHHhhCCCCCc
Confidence 8999999999999999999876 542 22333444444344578899987666899999999888765210
Q ss_pred --------------cccCCCCcHHHHHHHHHHHHhhchh----hHHHHHHHHHHHHHHHHHHHHHhCCCcee-eecccee
Q 011777 347 --------------QFNTFGGNPVCSAGGLAVLRVIDKE----RRQAHCADVGSHLLGRLRTLQERHDIIGD-VRGRGLM 407 (477)
Q Consensus 347 --------------~~~t~~~~~~~~aaa~a~l~~l~~~----~~~~~~~~~~~~l~~~L~~l~~~~~~~~~-v~g~g~~ 407 (477)
....++.+..++.++.++++.+.++ +..++++++.+++++.|+++ ....+.. ....+.+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~--g~~~~~~~~~~~~~~ 293 (355)
T TIGR03301 216 YLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRAL--GFQPLLPERWQSPII 293 (355)
T ss_pred eeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHc--CCeeecCCCCCCCcE
Confidence 0123456777778888888876543 34556666777777777654 1211111 1223445
Q ss_pred EEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCC-CCEEEEeCCCCCcHHHHHHHHHHHHHHH
Q 011777 408 VGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLH-GNVFRIKPPMCFTKDDADFLVDALDYSM 474 (477)
Q Consensus 408 ~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~-~~~iRi~p~~~~t~e~i~~~l~~l~~~l 474 (477)
+++.+... + .....++.+.|.++||++.++... .+++||++...++++|++++++.|++++
T Consensus 294 ~~~~~~~~-----~-~~~~~~~~~~l~~~gi~i~~~~~~~~~~iRis~~~~~~~~~i~~~~~~l~~~~ 355 (355)
T TIGR03301 294 VSFLYPDD-----P-DFDFDDFYQELKERGFVIYPGKLTLADTFRIGTIGEIDAADIERLLEAIKDAL 355 (355)
T ss_pred EEEECCCC-----C-cchHHHHHHHHHHCCEEEECCccccccEEEEecCCCCCHHHHHHHHHHHHhhC
Confidence 56655211 1 112457889999999999887422 3689999888899999999999998764
No 212
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.89 E-value=1.7e-20 Score=189.17 Aligned_cols=318 Identities=18% Similarity=0.154 Sum_probs=201.8
Q ss_pred CCCCCHHHHHHHHHHHhhccccccccC-------ChHHHHHHHHHHhhCCCC-CCEEEEeCChHHHHHHHHHHHHhc-cC
Q 011777 110 CGHCHPDVLNAIFEQSKLLQHATTIYL-------HHAIADFAEALASKMPGN-LKVVYFVNSGTEANELAMLMARLS-TG 180 (477)
Q Consensus 110 lGh~~p~v~~Av~~~l~~~~~~~~~~~-------~~~~~~l~~~La~~~~~~-~~~v~~~~sGseA~~~Al~~ar~~-~~ 180 (477)
.|-.++.+.+++.+.+.........+. .....++.+.++++++.+ .+.+++++|+++|+..+++.+... .+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~~~~ 87 (373)
T cd06453 8 TSQKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYGLGRANKP 87 (373)
T ss_pred ccCCCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHHhhhcCCC
Confidence 345689999999888765322111111 233567888999998765 568999999999999999866431 14
Q ss_pred CceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEeccc
Q 011777 181 NLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETI 260 (477)
Q Consensus 181 ~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi 260 (477)
+++|++.++.|.+.......... ..|.....++.......+ .+++++.+. +++++|++..+
T Consensus 88 g~~vl~~~~~~~~~~~~~~~~~~---------~~g~~~~~v~~~~~~~~d------~~~l~~~l~----~~~~~v~~~~~ 148 (373)
T cd06453 88 GDEIVTSVMEHHSNIVPWQQLAE---------RTGAKLKVVPVDDDGQLD------LEALEKLLT----ERTKLVAVTHV 148 (373)
T ss_pred CCEEEECcchhHHHHHHHHHHHh---------hcCcEEEEeecCCCCCcC------HHHHHHHhc----CCceEEEEeCc
Confidence 56788877666543211111000 011122111111111111 578888775 36778888777
Q ss_pred CCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCcceeeec--ccccCccceEEEEeCHHH
Q 011777 261 QGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMA--KGIGNGLPLGAVVTTPEI 338 (477)
Q Consensus 261 ~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~s--K~lg~G~pig~v~~~~~~ 338 (477)
++++|.+.+ +++|.++|++||++||+|++++ +|.. .++.....+|++++| |.+++ .++|++++++++
T Consensus 149 ~~~tG~~~~----~~~i~~~~~~~~~~li~D~a~~-~~~~-----~~~~~~~~~d~~~~s~~K~~~~-~g~g~~~~~~~~ 217 (373)
T cd06453 149 SNVLGTINP----VKEIGEIAHEAGVPVLVDGAQS-AGHM-----PVDVQDLGCDFLAFSGHKMLGP-TGIGVLYGKEEL 217 (373)
T ss_pred ccccCCcCC----HHHHHHHHHHcCCEEEEEhhhh-cCce-----eeeccccCCCEEEeccccccCC-CCcEEEEEchHH
Confidence 778887776 8999999999999999999986 3321 122223457888887 99987 678999999998
Q ss_pred HHhhccccccc---------------------CCCCcHHHHHHHHHHHHhhchh---hHHHHHHHHHHHHHHHHHHHHHh
Q 011777 339 ANVMAQKIQFN---------------------TFGGNPVCSAGGLAVLRVIDKE---RRQAHCADVGSHLLGRLRTLQER 394 (477)
Q Consensus 339 ~~~~~~~~~~~---------------------t~~~~~~~~aaa~a~l~~l~~~---~~~~~~~~~~~~l~~~L~~l~~~ 394 (477)
.+.+.....++ ..+.|..+..+..++++.+.++ +..++.+++.+++++.|+++
T Consensus 218 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~--- 294 (373)
T cd06453 218 LEEMPPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEI--- 294 (373)
T ss_pred hhcCCCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcC---
Confidence 87766432111 1123445555666677766553 34455555555555555443
Q ss_pred CCCce---eeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCC----------CCCEEEEeCCCCCcHH
Q 011777 395 HDIIG---DVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGL----------HGNVFRIKPPMCFTKD 461 (477)
Q Consensus 395 ~~~~~---~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~----------~~~~iRi~p~~~~t~e 461 (477)
+.+. .....+.++.+.+.. ....++.+.|.++||.+.++.. ..+++|++++..+|++
T Consensus 295 -~~~~~~~~~~~~~~~~~~~~~~---------~~~~~i~~~l~~~gi~i~~g~~~~~~~~~~~~~~~~iRis~~~~~t~~ 364 (373)
T cd06453 295 -PGVRVYGDAEDRAGVVSFNLEG---------IHPHDVATILDQYGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNTEE 364 (373)
T ss_pred -CCeEEeCCccccCCeEEEEECC---------cCHHHHHHHHHHCCEEeccCccchhHHHHHhCCCCeEEEEecCCCCHH
Confidence 3222 112345566666521 1245788899999999875531 1468999999999999
Q ss_pred HHHHHHHHH
Q 011777 462 DADFLVDAL 470 (477)
Q Consensus 462 ~i~~~l~~l 470 (477)
|+|++++.|
T Consensus 365 di~~~~~~l 373 (373)
T cd06453 365 EIDALVEAL 373 (373)
T ss_pred HHHHHHhhC
Confidence 999999864
No 213
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.89 E-value=2.3e-21 Score=197.43 Aligned_cols=337 Identities=14% Similarity=0.091 Sum_probs=194.7
Q ss_pred CEEEeecCCcccccCCCCCHHHHHHHHHHHhhc-------cccccccCChHHHHHHHHHHhhCC--CCCCEEE--EeCCh
Q 011777 96 RRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLL-------QHATTIYLHHAIADFAEALASKMP--GNLKVVY--FVNSG 164 (477)
Q Consensus 96 ~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~-------~~~~~~~~~~~~~~l~~~La~~~~--~~~~~v~--~~~sG 164 (477)
...+|+..|.... .. .++.+.+++.+.+... .|....+..+.++.+++++.+... .+.++|. .|++|
T Consensus 29 ~~~i~l~~g~~~~-~~-~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G~ 106 (404)
T PTZ00376 29 PSKVNLGIGAYRD-EN-GKPYVLESVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQKLLFGEASYALAEKRIATVQALSG 106 (404)
T ss_pred cccEecccceeEC-CC-CCEehhhHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHhcCCCccccccCeEEEeeccCc
Confidence 3557877765321 11 2223344444443221 122222333444555555433321 2456787 48999
Q ss_pred HHHHHHHHHHHHhc-cCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHH
Q 011777 165 TEANELAMLMARLS-TGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDH 243 (477)
Q Consensus 165 seA~~~Al~~ar~~-~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~ 243 (477)
++|+..++.+.+.. .+++.|++.+++|+++.......+. ..+++|......++.| .+.+++.
T Consensus 107 ~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~-------------~~~~v~l~~~~~~~~d----~~~l~~~ 169 (404)
T PTZ00376 107 TGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVNIFKSAGL-------------NVKEYRYYDPKTKGLD----FDGMLED 169 (404)
T ss_pred chHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCC-------------ceeeccccCcccCCcC----HHHHHHH
Confidence 99999988754333 4578899999999988665444322 2222221000111112 4677777
Q ss_pred HhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCC--CC---cccc-ccCCCccee
Q 011777 244 IDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGS--HY---WGFE-TQGVIPDIV 317 (477)
Q Consensus 244 i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~--~~---~~~~-~~gv~pDiv 317 (477)
++... .+..++++...||++| ..++++.+++|.++|++||++||+||+|.+|.+.+. .. ..+. ..+...-+.
T Consensus 170 ~~~~~-~~~~~~~~~~p~NPTG-~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~vi~i~ 247 (404)
T PTZ00376 170 LRTAP-NGSVVLLHACAHNPTG-VDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVEFLVAQ 247 (404)
T ss_pred HHhCC-CCCEEEEeCCCCCCCC-CCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCcEEEEE
Confidence 75322 2345555555566666 566899999999999999999999999998865330 01 1111 111123344
Q ss_pred eeccccc-CccceEEE---EeCHHHHHhhccc---ccccCC-CCcHHHHHHHHHHHHhhch-hhH-------HHHHHHHH
Q 011777 318 TMAKGIG-NGLPLGAV---VTTPEIANVMAQK---IQFNTF-GGNPVCSAGGLAVLRVIDK-ERR-------QAHCADVG 381 (477)
Q Consensus 318 t~sK~lg-~G~pig~v---~~~~~~~~~~~~~---~~~~t~-~~~~~~~aaa~a~l~~l~~-~~~-------~~~~~~~~ 381 (477)
+|||.++ .|+|+||+ ++++++++.+... ....++ +.+++++.++.++|+.-+- +.+ .++++++.
T Consensus 248 SfSK~~~~~GlRvG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r 327 (404)
T PTZ00376 248 SFSKNMGLYGERIGALHIVCANKEEAANVLSQLKLIIRPMYSSPPIHGARIADRILSDPELRAEWLSELKEMSGRIQNMR 327 (404)
T ss_pred eCCCcccccccccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 7999999 79999998 5788765544221 112333 3467888888888853210 122 23344444
Q ss_pred HHHHHHHHHHHHhCC-Cceeeecc-ceeEEEEEeeCCCCCCccHHHHHHHHHHHHHc-CceeeccCCCCCEEEEeCCCCC
Q 011777 382 SHLLGRLRTLQERHD-IIGDVRGR-GLMVGMELVTDRKEKTPAKAETAVLFEKLREL-GVLVGKGGLHGNVFRIKPPMCF 458 (477)
Q Consensus 382 ~~l~~~L~~l~~~~~-~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~~~~~~iRi~p~~~~ 458 (477)
+.+.+.|+++. .+ ......+. |+++|+.+. .++++.|.++ ||.+.|++ |++.+. .
T Consensus 328 ~~l~~~L~~~~--~~~~~~~~~p~gg~f~~~~~~-------------~~~~~~L~~~~~v~v~p~~------Ris~~~-~ 385 (404)
T PTZ00376 328 QLLYDELKALG--SPGDWEHIINQIGMFSFTGLT-------------KEQVERLIEKYHIYLLDNG------RISVAG-L 385 (404)
T ss_pred HHHHHHHHhcC--CCCcccccccCceEEEecCCC-------------HHHHHHHHHhCCEeecCCC------eEEEec-c
Confidence 44544444431 11 11122233 566666541 2466667766 99998862 886532 7
Q ss_pred cHHHHHHHHHHHHHHHh
Q 011777 459 TKDDADFLVDALDYSMS 475 (477)
Q Consensus 459 t~e~i~~~l~~l~~~l~ 475 (477)
+++++++++++|++++.
T Consensus 386 ~~~~~~~~~~~l~~~~~ 402 (404)
T PTZ00376 386 TSKNVDYVAEAIHDVVR 402 (404)
T ss_pred CHHhHHHHHHHHHHHHh
Confidence 89999999999998875
No 214
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.89 E-value=1.3e-20 Score=191.58 Aligned_cols=325 Identities=17% Similarity=0.102 Sum_probs=198.9
Q ss_pred CEEEeecCCcccccCCCCCHHHHHHHHHHHhhccc-cccccC-----ChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHH
Q 011777 96 RRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQH-ATTIYL-----HHAIADFAEALASKMPGNLKVVYFVNSGTEANE 169 (477)
Q Consensus 96 ~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~-~~~~~~-----~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~ 169 (477)
..|||..+. |..++.+.+++.+.+..... ....|. .+...++.+.++++++.+.+.|++++|+++++.
T Consensus 18 ~~yl~~~~~------~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~~~~v~~~~~~t~~l~ 91 (397)
T TIGR01976 18 RVFFDNPAG------TQIPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNADPPEVVFGANATSLTF 91 (397)
T ss_pred eEEecCCcc------CCCCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCCCCCeEEEeCCHHHHHH
Confidence 478886543 34689999999998865321 111121 244678999999999776667999999999988
Q ss_pred HHHHHHHh-ccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCc-CCCCCCCHHHHHHHHHHHHhcc
Q 011777 170 LAMLMARL-STGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPY-HGSFGSDAARYAQDLQDHIDFG 247 (477)
Q Consensus 170 ~Al~~ar~-~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~le~~i~~~ 247 (477)
.++..... ..++++|++.++.|++........... .|.....++... ...++ .+++++.++
T Consensus 92 ~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~---------~g~~~~~~~~~~~~~~~~------~~~l~~~i~-- 154 (397)
T TIGR01976 92 LLSRAISRRWGPGDEVIVTRLDHEANISPWLQAAER---------AGAKVKWARVDEATGELH------PDDLASLLS-- 154 (397)
T ss_pred HHHHHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHh---------cCCEEEEEeccccCCCcC------HHHHHHhcC--
Confidence 77765422 345678888877776543221111000 011111111111 01111 477777775
Q ss_pred CCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCccee--eecccccC
Q 011777 248 TSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIV--TMAKGIGN 325 (477)
Q Consensus 248 ~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDiv--t~sK~lg~ 325 (477)
+++++|+++.+++++|.+.+ +++|.++|++||+++|+||+|. +|. ....+. ...+|++ +++|.+
T Consensus 155 --~~~~lv~i~~~~n~tG~~~~----~~~i~~~~~~~~~~~ivD~a~~-~~~---~~~~~~--~~~~d~~~~s~~K~~-- 220 (397)
T TIGR01976 155 --PRTRLVAVTAASNTLGSIVD----LAAITELVHAAGALVVVDAVHY-APH---GLIDVQ--ATGADFLTCSAYKFF-- 220 (397)
T ss_pred --CCceEEEEeCCCCCCCccCC----HHHHHHHHHHcCCEEEEehhhh-ccc---cCCCHH--HcCCCEEEEechhhc--
Confidence 35678888877788887776 9999999999999999999985 321 122222 2345666 567987
Q ss_pred ccceEEEEeCHHHHHhhcccccccC----------CCCcHHHHHHHHHHHHhhchhh-----------------HHHHHH
Q 011777 326 GLPLGAVVTTPEIANVMAQKIQFNT----------FGGNPVCSAGGLAVLRVIDKER-----------------RQAHCA 378 (477)
Q Consensus 326 G~pig~v~~~~~~~~~~~~~~~~~t----------~~~~~~~~aaa~a~l~~l~~~~-----------------~~~~~~ 378 (477)
|.++|++++++++++.+........ .+.|....++..++++.+.+.+ ..++..
T Consensus 221 g~~~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 300 (397)
T TIGR01976 221 GPHMGILWGRPELLMNLPPYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYEN 300 (397)
T ss_pred CCceEEEEEcHHHHhhCCCccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHH
Confidence 4579999999998877764321111 1233445555556666553321 123333
Q ss_pred HHHHHHHHHHHHHHHhCCCceee-----eccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccC---------
Q 011777 379 DVGSHLLGRLRTLQERHDIIGDV-----RGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGG--------- 444 (477)
Q Consensus 379 ~~~~~l~~~L~~l~~~~~~~~~v-----~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~--------- 444 (477)
++.+++++.|++ .+.+... ...+.++.+.+.. ....++.+.|.++||.+..+.
T Consensus 301 ~l~~~l~~~L~~----~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~ 367 (397)
T TIGR01976 301 RLAEYLLVGLSD----LPGVTLYGVARLAARVPTVSFTVHG---------LPPQRVVRRLADQGIDAWAGHFYAVRLLRR 367 (397)
T ss_pred HHHHHHHHHHhc----CCCEEEeCCCCccCCCceEEEEeCC---------cCHHHHHHHHHHCCeEEEeCccchHHHHHH
Confidence 444444444443 3312111 1134455544421 113568889999999998651
Q ss_pred ----CCCCEEEEeCCCCCcHHHHHHHHHHH
Q 011777 445 ----LHGNVFRIKPPMCFTKDDADFLVDAL 470 (477)
Q Consensus 445 ----~~~~~iRi~p~~~~t~e~i~~~l~~l 470 (477)
..+++||++++..+|++|++++++.|
T Consensus 368 ~~~~~~~~~iRis~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 368 LGLNDEGGVVRVGLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred hCCCCCCCeEEEEeeccCCHHHHHHHHHhC
Confidence 12468999999999999999999864
No 215
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.89 E-value=5.8e-21 Score=191.37 Aligned_cols=317 Identities=16% Similarity=0.142 Sum_probs=201.2
Q ss_pred CCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCC-CCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCc
Q 011777 113 CHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGN-LKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAY 191 (477)
Q Consensus 113 ~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~-~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~y 191 (477)
.+++|.+|+.+.+.. +.. ....+...++++.++++++.+ .+.+++++||++|+..+++... .+++.|++...+|
T Consensus 10 ~~~~v~~a~~~~~~~--~~~-~~~~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~~--~~g~~vl~~~~~~ 84 (356)
T cd06451 10 VPPRVLKAMNRPMLG--HRS-PEFLALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNLL--EPGDKVLVGVNGV 84 (356)
T ss_pred CCHHHHHHhCCCccC--CCC-HHHHHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHhC--CCCCEEEEecCCc
Confidence 467888888543321 111 112344678999999998763 3468899999999999997553 3567788887776
Q ss_pred cCCcc-cccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCC
Q 011777 192 HGGSS-GTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELA 270 (477)
Q Consensus 192 hG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~ 270 (477)
++... ......+. .+..++.... ...| .+++++.++ ++++++|++...+++.|.+.+
T Consensus 85 ~~~~~~~~~~~~g~----------~~~~v~~~~~----~~~~----~~~l~~~i~---~~~~~~v~i~~~~~~~G~~~~- 142 (356)
T cd06451 85 FGDRWADMAERYGA----------DVDVVEKPWG----EAVS----PEEIAEALE---QHDIKAVTLTHNETSTGVLNP- 142 (356)
T ss_pred hhHHHHHHHHHhCC----------CeEEeecCCC----CCCC----HHHHHHHHh---ccCCCEEEEeccCCCcccccC-
Confidence 65311 11111111 1222221110 1111 477888776 235677777776777887776
Q ss_pred chhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCcceee--ecccccCccceEEEEeCHHHHHhhcc--cc
Q 011777 271 PGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVT--MAKGIGNGLPLGAVVTTPEIANVMAQ--KI 346 (477)
Q Consensus 271 ~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt--~sK~lg~G~pig~v~~~~~~~~~~~~--~~ 346 (477)
+++|.++|+++|+++|+|++|. +|. ..+....++ +|+++ .+|.++++.++|+++.++++++.+.. ..
T Consensus 143 ---~~~i~~~a~~~~~~li~D~~~~-~g~---~~~~~~~~~--~d~~~~s~~K~l~~p~g~G~l~~~~~~~~~~~~~~~~ 213 (356)
T cd06451 143 ---LEGIGALAKKHDALLIVDAVSS-LGG---EPFRMDEWG--VDVAYTGSQKALGAPPGLGPIAFSERALERIKKKTKP 213 (356)
T ss_pred ---HHHHHHHHHhcCCEEEEeeehh-ccC---ccccccccC--ccEEEecCchhccCCCCcceeEECHHHHHHHHhcCCC
Confidence 8999999999999999999986 542 222223233 45554 57999987789999999998877652 10
Q ss_pred --c---------------ccCCCCcHHHHHHHHHHHHhhch---hhHHHHHHHHHHHHHHHHHHHHHhCCCceeeecc-c
Q 011777 347 --Q---------------FNTFGGNPVCSAGGLAVLRVIDK---ERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGR-G 405 (477)
Q Consensus 347 --~---------------~~t~~~~~~~~aaa~a~l~~l~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~-g 405 (477)
. ....+.++..+.++.++++.+.. +...++.+++.+++++.|.++ .........+. +
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~ 291 (356)
T cd06451 214 KGFYFDLLLLLKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEAL--GLKLLAKPELRSP 291 (356)
T ss_pred CceeecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc--CCeeccCcccCCC
Confidence 0 11123345556677778877654 345666777777777777664 22222211122 2
Q ss_pred eeEEEEEeeCCCCCCccHHHHHHHHHHHHHc-CceeeccCC--CCCEEEEeCCCCCcHHHHHHHHHHHHHHHh
Q 011777 406 LMVGMELVTDRKEKTPAKAETAVLFEKLREL-GVLVGKGGL--HGNVFRIKPPMCFTKDDADFLVDALDYSMS 475 (477)
Q Consensus 406 ~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~~--~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~ 475 (477)
.+.++.+.. ......+.+.|.++ ||.+.++.. .+++||++++..+|++|+++++++|+++++
T Consensus 292 ~~~~~~~~~--------~~~~~~~~~~L~~~~gI~~~~g~~~~~~~~iRis~~~~~~~e~v~~~~~~l~~~~~ 356 (356)
T cd06451 292 TVTAVLVPE--------GVDGDEVVRRLMKRYNIEIAGGLGPTAGKVFRIGHMGEATREDVLGVLSALEEALK 356 (356)
T ss_pred ceEEEECCC--------CCCHHHHHHHHHHhCCEEEecccccccCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 233333311 11245788999998 999987632 347999999999999999999999998764
No 216
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.89 E-value=9.6e-22 Score=196.39 Aligned_cols=288 Identities=17% Similarity=0.212 Sum_probs=186.6
Q ss_pred cccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCC
Q 011777 133 TIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIP 212 (477)
Q Consensus 133 ~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~ 212 (477)
..|+.+...+|+++++++++.+.++|++++|++|++..+++.... .|++.|++.+++|..+...+...
T Consensus 52 ~~Yp~~~~~~l~~~~a~~~g~~~~~I~~~~Gs~e~i~~~~~~~~~-~g~~~vli~~P~y~~y~~~~~~~----------- 119 (351)
T PRK01688 52 NRYPECQPKAVIENYAAYAGVKPEQVLVSRGADEGIELLIRAFCE-PGKDAILYCPPTYGMYSVSAETI----------- 119 (351)
T ss_pred ccCCCCChHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcC-CCCCEEEEcCCCHHHHHHHHHHc-----------
Confidence 346666678999999999988888999999999999999886532 23478999999997654332222
Q ss_pred CCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCee-EEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEc
Q 011777 213 QGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVA-GFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIAD 291 (477)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a-~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~D 291 (477)
|...+.+|.. ..+..| .+++++.+. +++ .++++| +|++| ...+.+.+++|.+.|++ ++++|+|
T Consensus 120 --G~~~~~v~~~--~~~~~d----~~~l~~~~~-----~~~lv~l~nP-nNPTG-~~~~~~~l~~l~~~~~~-~~~vivD 183 (351)
T PRK01688 120 --GVEIRTVPTL--DNWQLD----LPAIADNLD-----GVKVVYVCSP-NNPTG-NLINPQDLRTLLELTRG-KAIVVAD 183 (351)
T ss_pred --CCEEEEeecC--CCCCCC----HHHHHHhcc-----CCcEEEEeCC-CCCCC-CCCCHHHHHHHHHhCCC-CcEEEEE
Confidence 2222222211 112212 355655542 334 455555 55566 45577888888888876 6889999
Q ss_pred CcccCccCCCCCCccccccCCCccee---eeccccc-CccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHh
Q 011777 292 EVQTGFGRTGSHYWGFETQGVIPDIV---TMAKGIG-NGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRV 367 (477)
Q Consensus 292 Ev~~gfgr~G~~~~~~~~~gv~pDiv---t~sK~lg-~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~ 367 (477)
|+|..|.... ... ......++++ ||||.+| .|+|+||+++++++++.+.... ..|+.|.+++.++.++|+.
T Consensus 184 Eay~~f~~~~-s~~--~~~~~~~n~iv~rSfSK~~glaGlRiGy~i~~~~~i~~l~~~~--~~~~v~~~~~~~a~~~L~~ 258 (351)
T PRK01688 184 EAYIEFCPQA-SLA--GWLAEYPHLVILRTLSKAFALAGLRCGFTLANEEVINLLLKVI--APYPLSTPVADIAAQALSP 258 (351)
T ss_pred CchhhcCCCC-ChH--HHHhhCCCEEEEecchHhhcCHHHHHhHHhCCHHHHHHHHhcc--CCCCCCHHHHHHHHHHHhc
Confidence 9999885221 111 1112223433 7999999 6999999999999998887543 3466777777777777753
Q ss_pred hchh---hHHHHHHHHHHHHHHHHHHHHHhCCCc-eeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeecc
Q 011777 368 IDKE---RRQAHCADVGSHLLGRLRTLQERHDII-GDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKG 443 (477)
Q Consensus 368 l~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~-~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~ 443 (477)
...+ +..+.+.+..+++.+.|+ +.+.+ ...+..+.|+++.+. ...++.+.|+++||+++++
T Consensus 259 ~~~~~~~~~~~~~~~~r~~l~~~L~----~~~~~~~~~ps~~nfi~~~~~-----------~~~~l~~~L~~~gi~vr~~ 323 (351)
T PRK01688 259 QGIAAMRERVAEINANRQWLIAALK----EIPCVEQVFDSETNYILARFT-----------ASSAVFKSLWDQGIILRDQ 323 (351)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHH----hCCCCCeECCCCCcEEEEEcC-----------CHHHHHHHHHHCCeEEEEC
Confidence 1111 222333333444444443 34333 233456778787662 1357888999999999876
Q ss_pred CCC---CCEEEEeCCCCCcHHHHHHHHHHHH
Q 011777 444 GLH---GNVFRIKPPMCFTKDDADFLVDALD 471 (477)
Q Consensus 444 ~~~---~~~iRi~p~~~~t~e~i~~~l~~l~ 471 (477)
+.+ .+++||+.. +++|++.++++|+
T Consensus 324 ~~~~~~~~~iRis~~---~~~e~~~l~~al~ 351 (351)
T PRK01688 324 NKQPGLSNCLRITIG---TREECQRVIDALR 351 (351)
T ss_pred CCcCCCCCeEEEeCC---CHHHHHHHHHhhC
Confidence 422 478999644 7899999998873
No 217
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.89 E-value=6.7e-21 Score=189.48 Aligned_cols=322 Identities=21% Similarity=0.136 Sum_probs=199.5
Q ss_pred eecCCcccccCCCCCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhcc
Q 011777 100 DAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLST 179 (477)
Q Consensus 100 D~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~ 179 (477)
||.+.. ++| ++|++.+++.+.+... ...+..+...++++.++++++ .+.+++++||++|+..+++... .
T Consensus 1 ~~~~~~---~~~-~~~~v~~a~~~~~~~~---~~~~~~~~~~~l~~~~a~~~g--~~~~~~~~~gt~a~~~~~~~l~--~ 69 (338)
T cd06502 1 DFRSDT---VTG-PTPEMLEAMAAANVGD---DVYGEDPTTAKLEARAAELFG--KEAALFVPSGTAANQLALAAHT--Q 69 (338)
T ss_pred Cccccc---CCC-CCHHHHHHHHhcccCC---cccCCCHHHHHHHHHHHHHhC--CCeEEEecCchHHHHHHHHHhc--C
Confidence 455443 466 7899999998765321 122356778899999999986 4678899999999999988653 3
Q ss_pred CCceEEEEccCccCCcccc--cccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccC---CCCeeE
Q 011777 180 GNLGMIALRNAYHGGSSGT--IGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGT---SGKVAG 254 (477)
Q Consensus 180 ~~~~ii~~~~~yhG~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~---~~~~a~ 254 (477)
+++.|++..++|....... .... |...+.++... +..| .++++++++... ..++++
T Consensus 70 ~gd~v~~~~~~~~~~~~~~~~~~~~------------g~~~~~v~~~~---~~~d----~~~l~~~i~~~~~~~~~~~~~ 130 (338)
T cd06502 70 PGGSVICHETAHIYTDEAGAPEFLS------------GVKLLPVPGEN---GKLT----PEDLEAAIRPRDDIHFPPPSL 130 (338)
T ss_pred CCCeEEEecCcceeeecCCcHHHHc------------CceEEeecCCC---CcCC----HHHHHHHhhccCCCcCCcceE
Confidence 5566776655543221110 0011 22222222111 1112 477888775211 125677
Q ss_pred EEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCcc--CCCCCCccccccCCCccee--eecccccCccceE
Q 011777 255 FIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFG--RTGSHYWGFETQGVIPDIV--TMAKGIGNGLPLG 330 (477)
Q Consensus 255 vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfg--r~G~~~~~~~~~gv~pDiv--t~sK~lg~G~pig 330 (477)
|+++..+++|| +. +.+.+++|.++|++||+++|+||+|..+. ..| . ........+|++ +++|.++. |.|
T Consensus 131 v~l~~p~n~g~-~~-~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~-~--~~~~~~~~~d~~~~s~sK~~~~--~~g 203 (338)
T cd06502 131 VSLENTTEGGT-VY-PLDELKAISALAKENGLPLHLDGARLANAAAALG-V--ALKTYKSGVDSVSFCLSKGGGA--PVG 203 (338)
T ss_pred EEEEeecCCcc-cc-CHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcC-C--CHHHHHhcCCEEEEeccccCCC--ccc
Confidence 77776566654 33 77889999999999999999999875221 122 1 112122234544 68899974 225
Q ss_pred E-EEeCHHHHHhhcccc--cccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeecccee
Q 011777 331 A-VVTTPEIANVMAQKI--QFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLM 407 (477)
Q Consensus 331 ~-v~~~~~~~~~~~~~~--~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~ 407 (477)
+ +++++++++.+.... ++++++.+++.++++.++|+.-...+..+++.++.+++.+.|+++ +.. .....+.+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~-~~~~~~~~ 278 (338)
T cd06502 204 AVVVGNRDFIARARRRRKQAGGGMRQSGFLAAAGLAALENDLWLRRLRHDHEMARRLAEALEEL----GGL-ESEVQTNI 278 (338)
T ss_pred eEEECCHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc----CCC-cccccCCe
Confidence 4 567888888776532 235566677888888887764222344566777777777777664 221 12234445
Q ss_pred EEEEEeeCCCCCCccHHHHHHHHHHHH---HcCceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHH
Q 011777 408 VGMELVTDRKEKTPAKAETAVLFEKLR---ELGVLVGKGGLHGNVFRIKPPMCFTKDDADFLVDALDY 472 (477)
Q Consensus 408 ~~i~~~~~~~~~~~~~~~~~~~~~~l~---~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~ 472 (477)
+.+.+.. .......+.+.+. ++|+++.+.+ .+++||+|++.++++|++++++++++
T Consensus 279 ~~v~~~~-------~~~~~~~l~~~l~~~~~~gi~~~~~~--~~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 279 VLLDPVE-------ANAVFVELSKEAIERRGEGVLFYAWG--EGGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred EEEecCC-------ccHHHHHHHHHHHHhhhCCEEEEecC--CCeEEEEeecCCCHHHHHHHHHHHhc
Confidence 5554421 1112333444443 7899998764 38999999999999999999999875
No 218
>PRK02948 cysteine desulfurase; Provisional
Probab=99.89 E-value=6.5e-21 Score=192.82 Aligned_cols=330 Identities=19% Similarity=0.166 Sum_probs=203.7
Q ss_pred EEEeecCCcccccCCCCCHHHHHHHHHHHhhccc-cccc-----cCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHH
Q 011777 97 RYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQH-ATTI-----YLHHAIADFAEALASKMPGNLKVVYFVNSGTEANEL 170 (477)
Q Consensus 97 ~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~-~~~~-----~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~ 170 (477)
.|||..+. |..++.+++++.+.+..... .... .......++++.++++++.+.+.|+|++|+++++..
T Consensus 2 ~yld~a~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~~~g~t~a~~~ 75 (381)
T PRK02948 2 IYLDYAAT------TPMSKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIGGEEQGIYFTSGGTESNYL 75 (381)
T ss_pred EeccCCCC------CCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHH
Confidence 47886543 34689999999988864311 1111 112446788899999998777899999999999999
Q ss_pred HHHHHHhc--cCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccC
Q 011777 171 AMLMARLS--TGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGT 248 (477)
Q Consensus 171 Al~~ar~~--~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~ 248 (477)
+++.+... .+++.|++....|+........... .|......+....... | .+++++.++
T Consensus 76 ~~~~~~~~~~~~g~~vv~~~~~h~s~~~~~~~~~~----------~g~~v~~v~~~~~~~~--d----~~~l~~~l~--- 136 (381)
T PRK02948 76 AIQSLLNALPQNKKHIITTPMEHASIHSYFQSLES----------QGYTVTEIPVDKSGLI--R----LVDLERAIT--- 136 (381)
T ss_pred HHHHHHHhccCCCCEEEECCcccHHHHHHHHHHHh----------CCCEEEEEeeCCCCCC--C----HHHHHHhcC---
Confidence 98876431 2344555544333322222111100 1222222221111111 1 477777765
Q ss_pred CCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCccee--eecccccCc
Q 011777 249 SGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIV--TMAKGIGNG 326 (477)
Q Consensus 249 ~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDiv--t~sK~lg~G 326 (477)
+++.+|+++.+++++|.+.+ +++|.++|+++|+++|+|++|+ ||..+ +..+.++ .|++ +++|.+|.
T Consensus 137 -~~~~lv~~~~~~n~tG~~~~----~~~I~~l~~~~~~~vivD~~~~-~g~~~---~~~~~~~--~d~~~~s~~K~~gp- 204 (381)
T PRK02948 137 -PDTVLASIQHANSEIGTIQP----IAEIGALLKKYNVLFHSDCVQT-FGKLP---IDVFEMG--IDSLSVSAHKIYGP- 204 (381)
T ss_pred -CCCEEEEEECCcCCcEeehh----HHHHHHHHHHcCCEEEEEChhh-ccccc---cCcccCC--CCEEEecHHhcCCC-
Confidence 35678888888888998887 8999999999999999998876 65432 2223333 4555 57797762
Q ss_pred cceEEEEeCHHHH-Hhhcc----cccccCCCCcHHHHHHHHHHHHhhch--hhHHHHHHHHHHHHHHHHHHHHHhCCCce
Q 011777 327 LPLGAVVTTPEIA-NVMAQ----KIQFNTFGGNPVCSAGGLAVLRVIDK--ERRQAHCADVGSHLLGRLRTLQERHDIIG 399 (477)
Q Consensus 327 ~pig~v~~~~~~~-~~~~~----~~~~~t~~~~~~~~aaa~a~l~~l~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~ 399 (477)
..+|++++++++. ..+.. ......++.|.++++++.++++.+.+ ++..++++++.++++++|+++. +. +.
T Consensus 205 ~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~~-v~ 281 (381)
T PRK02948 205 KGVGAVYINPQVRWKPVFPGTTHEKGFRPGTVNVPGIAAFLTAAENILKNMQEESLRFKELRSYFLEQIQTLP--LP-IE 281 (381)
T ss_pred CcEEEEEEcCCCCCCCcccCCCCCCCcCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--CC-EE
Confidence 2379988887751 11110 00112345678888888888876532 3455666777777777766541 11 11
Q ss_pred eeec-----cceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCC---------------------CCCEEEEe
Q 011777 400 DVRG-----RGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGL---------------------HGNVFRIK 453 (477)
Q Consensus 400 ~v~g-----~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~---------------------~~~~iRi~ 453 (477)
..+ ...++.+.+.. ....++...|.++||.+..+.. ..+++|++
T Consensus 282 -~~~~~~~~~~~i~~~~~~~---------~~~~~~~~~l~~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis 351 (381)
T PRK02948 282 -VEGHSTSCLPHIIGVTIKG---------IEGQYTMLECNRRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFS 351 (381)
T ss_pred -EeCCCccCcCCEEEEEeCC---------CCHHHHHHhcccCCEEEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEE
Confidence 111 11122232210 0134566778889999986531 13689999
Q ss_pred CCCCCcHHHHHHHHHHHHHHHhh
Q 011777 454 PPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 454 p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
+...+|++|++++++.|++++++
T Consensus 352 ~~~~~t~~di~~l~~~l~~~~~~ 374 (381)
T PRK02948 352 FGQQTTKDQIDTTIHALETIGNQ 374 (381)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999988764
No 219
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.88 E-value=1.6e-20 Score=188.63 Aligned_cols=319 Identities=16% Similarity=0.127 Sum_probs=201.8
Q ss_pred CCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCCC--CEEEEeCChHHHHHHHHHHHHhccCCceEEEEccC
Q 011777 113 CHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGNL--KVVYFVNSGTEANELAMLMARLSTGNLGMIALRNA 190 (477)
Q Consensus 113 ~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~--~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~ 190 (477)
.+++|.+++.++. .+.. ........++++.|+++++... +.|++++|||+|++.++.... .+++++|+..++
T Consensus 14 ~~~~v~~~~~~~~---~~~~-~~~~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~--~~~~~vlv~~~~ 87 (363)
T TIGR02326 14 TSRTVKEAMLFDW---CTWD-SDYNIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAV--PKDGKLLVVING 87 (363)
T ss_pred CCHHHHHHhCCCC---CCCC-hHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcC--CCCCeEEEEeCC
Confidence 3566666654433 1211 1234456788899999987653 379999999999999987553 255677777777
Q ss_pred ccCCcccc-cccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeC
Q 011777 191 YHGGSSGT-IGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVEL 269 (477)
Q Consensus 191 yhG~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~ 269 (477)
+|+..... .... |+....++.......+ .++++++++.. .++..+.+..+.+.+|.+.+
T Consensus 88 ~~~~~~~~~a~~~------------g~~~~~v~~~~~~~~d------~~~l~~~l~~~--~~~~~v~~~~~~~~tG~~~~ 147 (363)
T TIGR02326 88 AYGARIVQIAEYL------------GIPHHVVDTGEVEPPD------VVEVEAILAAD--PAITHIALVHCETTTGILNP 147 (363)
T ss_pred hhhHHHHHHHHHc------------CCceEEEeCCCCCCCC------HHHHHHHHhhC--CCccEEEEEeecCCccccCc
Confidence 77653111 1111 2222222221111122 57888887632 23455555556677888877
Q ss_pred CchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCccee--eecccccCccceEEEEeCHHHHHhhcccc-
Q 011777 270 APGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIV--TMAKGIGNGLPLGAVVTTPEIANVMAQKI- 346 (477)
Q Consensus 270 ~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDiv--t~sK~lg~G~pig~v~~~~~~~~~~~~~~- 346 (477)
+++|.++|++||+++|+|++|+ +|. ..+.+..+ .+|++ +++|+++++.++|+++++++.++.+....
T Consensus 148 ----i~~I~~l~~~~g~~livD~~~~-~g~---~~~~~~~~--~~D~~~~s~~K~l~~p~G~G~l~~~~~~~~~~~~~~~ 217 (363)
T TIGR02326 148 ----IEAVAKLAHRHGKVTIVDAMSS-FGG---IPIDIAEL--HIDYLISSANKCIQGVPGFGFVIARQAELAACKGNAR 217 (363)
T ss_pred ----HHHHHHHHHHcCCEEEEEcccc-ccC---cccchhhc--CccEEEecCccccccCCcceEEEECHHHHHHhhcCCC
Confidence 8999999999999999999986 543 22333333 45665 46799987667899999998876543210
Q ss_pred -----------------cccCCCCcHHHHHHHHHHHHhhchh----hHHHHHHHHHHHHHHHHHHHHHhCCCceee-ecc
Q 011777 347 -----------------QFNTFGGNPVCSAGGLAVLRVIDKE----RRQAHCADVGSHLLGRLRTLQERHDIIGDV-RGR 404 (477)
Q Consensus 347 -----------------~~~t~~~~~~~~aaa~a~l~~l~~~----~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v-~g~ 404 (477)
....|..+...+.+..++++.+.++ +..+++.++.+++++.|+++ ........ ...
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~ft~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~ 295 (363)
T TIGR02326 218 SLSLDLYDQWRCMEDNHGKWRFTSPTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRAL--GFEPLLDDEIQS 295 (363)
T ss_pred ceeecHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc--CCeeccCcccCC
Confidence 0123456777778877888776443 34566677777777777654 12221111 012
Q ss_pred ceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCC-CCEEEEeCCCCCcHHHHHHHHHHHHHHHh
Q 011777 405 GLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLH-GNVFRIKPPMCFTKDDADFLVDALDYSMS 475 (477)
Q Consensus 405 g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~-~~~iRi~p~~~~t~e~i~~~l~~l~~~l~ 475 (477)
+.+.++.+... + ......+.+.|.++||.+.++... .+.||+++...++.+|+++++++|++++.
T Consensus 296 ~~~~~~~~~~~-----~-~~~~~~v~~~L~~~gi~v~~g~~~~~~~iRi~~~~~~~~edv~~~l~~l~~~l~ 361 (363)
T TIGR02326 296 PIITSFYSPED-----P-DYRFADFYQRLKEQGFVIYPGKVSQVDCFRIGNIGEVDAADITRLLTAIGKAMY 361 (363)
T ss_pred ceEEEEECCCC-----C-CCCHHHHHHHHHHCCEEEECCcCCCCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 33445554211 0 012456888899999999987533 47899998677899999999999998864
No 220
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.88 E-value=2.2e-21 Score=199.74 Aligned_cols=345 Identities=14% Similarity=0.099 Sum_probs=190.6
Q ss_pred EEeecCCcccccCCCCCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhh-CC-----CCCCEEEEeCChHHHHHHH
Q 011777 98 YLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASK-MP-----GNLKVVYFVNSGTEANELA 171 (477)
Q Consensus 98 ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~-~~-----~~~~~v~~~~sGseA~~~A 171 (477)
.+|+..|.. |...|+.+..+.+.+....|+...+..+.++++++.+.+. .. .+.++|++|+|+++|+..+
T Consensus 102 ~i~l~~g~p----~~~~~~~v~e~~~~~~~~~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~al~~~ 177 (527)
T PRK09275 102 AVSYVRDQL----GFDADEFVYELVDGIIGDNYPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTAAMCYI 177 (527)
T ss_pred HHhhcCCCC----CCCCCHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHH
Confidence 345444432 4444444444556554322322333345566666544332 11 1124899999999999998
Q ss_pred HHHHH---hccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccC
Q 011777 172 MLMAR---LSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGT 248 (477)
Q Consensus 172 l~~ar---~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~ 248 (477)
+.... ...+++.|++.+++|..+......... +...++++......|..| .++++++++
T Consensus 178 ~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~l~g~-----------~~~~v~v~~~~~~~f~~d----~~~l~~~~~--- 239 (527)
T PRK09275 178 FDSLKENGLLKAGDKIALMTPIFTPYLEIPELPRY-----------DLEVVHINADEENEWQYP----DSELEKLRD--- 239 (527)
T ss_pred HHHHhhhhcCCCCCEEEEeCCChHHHHHHHHHcCC-----------CeEEEEeecCcccCCCCC----HHHHHhhcC---
Confidence 87521 234678999999999887544322211 222333221111112222 366777654
Q ss_pred CCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHH--hCcEEEEcCcccCccCCCCCCccc-cc-cCCCcceeeeccccc
Q 011777 249 SGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRK--AGGVCIADEVQTGFGRTGSHYWGF-ET-QGVIPDIVTMAKGIG 324 (477)
Q Consensus 249 ~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~--~gillI~DEv~~gfgr~G~~~~~~-~~-~gv~pDivt~sK~lg 324 (477)
.++++|++...+|++| .+.+++.+++|.++|++ +|++||+||+|..|... +..+ .. .+...-+-+|||.++
T Consensus 240 -~~tkai~l~nP~NPTG-~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~---~~s~~~~~~~~~I~v~SfSK~f~ 314 (527)
T PRK09275 240 -PSIKALFLVNPSNPPS-VAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVDD---FRSLFAVLPYNTILVYSFSKYFG 314 (527)
T ss_pred -CCCCEEEEeCCcCCcC-CCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhccc---ccCHHHhCCCCEEEEeehhhhcc
Confidence 3555555443355566 56689999999999965 59999999999987531 1111 11 112223447999998
Q ss_pred -CccceEEEEeCHH-----HHHhh--------------------------------cccccccCCCCcHHHHHH-HH---
Q 011777 325 -NGLPLGAVVTTPE-----IANVM--------------------------------AQKIQFNTFGGNPVCSAG-GL--- 362 (477)
Q Consensus 325 -~G~pig~v~~~~~-----~~~~~--------------------------------~~~~~~~t~~~~~~~~aa-a~--- 362 (477)
.|||+||++++++ +++.+ +......|.+.+.+.|.+ ++
T Consensus 315 mtG~RlG~i~~~~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~~ 394 (527)
T PRK09275 315 ATGWRLGVIALHEDNVFDKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSL 394 (527)
T ss_pred CcHhHHhhhhcCchhHHHHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHH
Confidence 5999999999876 33322 122233456666666665 32
Q ss_pred -HHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCc-eeeeccc-eeEEEEEeeCC---CCCCcc-----HHHHHHHHH
Q 011777 363 -AVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDII-GDVRGRG-LMVGMELVTDR---KEKTPA-----KAETAVLFE 431 (477)
Q Consensus 363 -a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~-~~v~g~g-~~~~i~~~~~~---~~~~~~-----~~~~~~~~~ 431 (477)
+.++. .+++.+. +.+.++++...+.+..+.. ...++.| .++++++..-. ..+... .....+++.
T Consensus 395 ~all~~--~~~~~~~---~~~~~~~Rr~~l~~~Lg~~~~~~~p~g~fY~~~di~~~~~~~~g~~f~~~l~~~~~~~~f~~ 469 (527)
T PRK09275 395 FALLDE--EDAYKKA---MKDIIRRRYKALYEGLGLPEPEDPNNAAYYTLIDLEEWAEKNYGKEFADYLKKNYSPVDLLF 469 (527)
T ss_pred HHHHhC--chHHHHH---HHHHHHHHHHHHHHHcCCCCcCCCCCeeEEEEEEhHHhhhhccCchhhhhhhccCCHHHHHH
Confidence 22331 1233332 3333333333333333321 1123444 55566653210 000000 001234444
Q ss_pred HH-HHcCceeeccCCCC---CEEEEeCCCC-CcHHHHHHHHHHHHHHHhh
Q 011777 432 KL-RELGVLVGKGGLHG---NVFRIKPPMC-FTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 432 ~l-~~~Gv~v~~~~~~~---~~iRi~p~~~-~t~e~i~~~l~~l~~~l~~ 476 (477)
.| .+.||.+.||..++ +++||+ ++ .+++++.++.++|.+++.+
T Consensus 470 ~Ll~e~gV~v~PG~~Fg~~~~~vRis--~a~~~~~~~~~~~~rl~~~l~~ 517 (527)
T PRK09275 470 RLAEETGVVLLPGGGFGGPEWSVRVS--LANLNEEDYAKIGKAIRKLLDE 517 (527)
T ss_pred HHHhcCCEEEeCchhhCCCCCeEEEE--EecCCHHHHHHHHHHHHHHHHH
Confidence 44 56699999986554 589996 45 5889999999999988754
No 221
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.88 E-value=1.5e-20 Score=177.73 Aligned_cols=316 Identities=20% Similarity=0.203 Sum_probs=221.4
Q ss_pred CCHHHHHHHHHHHhhcccccc-----ccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHH-HHHhccCCceEEE
Q 011777 113 CHPDVLNAIFEQSKLLQHATT-----IYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAML-MARLSTGNLGMIA 186 (477)
Q Consensus 113 ~~p~v~~Av~~~l~~~~~~~~-----~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~-~ar~~~~~~~ii~ 186 (477)
.||+|.+|+.+.+++...... .+.+....+|.++|+++... +..++.+|.--||+.-+- +++... +-+|.
T Consensus 186 ~Hp~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv~LE~eLA~LHqK--~aALlFsSCfVANDstLftLak~lp--gcei~ 261 (570)
T KOG1360|consen 186 RHPEVLDAMHDTLDRHGAGAGGTRNISGHSKHHVRLEAELADLHQK--EAALLFSSCFVANDSTLFTLAKKLP--GCEIF 261 (570)
T ss_pred CChHHHHHHHHHHHHcCCCcCCccccCCCCchhhhHHHHHHHHhcC--cceeeeeeeeeccchHHHHHHHHCC--CcEEe
Confidence 499999999999998532211 24566778999999999854 456666777777877665 444432 34555
Q ss_pred EccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCe
Q 011777 187 LRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGA 266 (477)
Q Consensus 187 ~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~ 266 (477)
-+.+-|......+..++.+.+. |..++ +++|+++++...+...+.|-+|.+.++.|.
T Consensus 262 SD~gNHASMI~GIrns~v~K~I--------------------FrHND---~~hL~~lL~~~~~svPKivAFEtVhSM~Ga 318 (570)
T KOG1360|consen 262 SDEGNHASMIQGIRNSRVPKHI--------------------FRHND---LDHLEQLLQSSPKSVPKIVAFETVHSMDGA 318 (570)
T ss_pred ccccchHHHHHHhhhcCCccee--------------------eccCC---HHHHHHHHHhCCCCCCceEEEeeeeccCCC
Confidence 6667777655544444322211 11111 588999998666677889999999999999
Q ss_pred eeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccc-cccCC--Cccee--eecccccC-ccceEEEEeCHHHHH
Q 011777 267 VELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGF-ETQGV--IPDIV--TMAKGIGN-GLPLGAVVTTPEIAN 340 (477)
Q Consensus 267 ~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~-~~~gv--~pDiv--t~sK~lg~-G~pig~v~~~~~~~~ 340 (477)
+.| |++|.+++++||++-.+|||+. .|..|.+.-+. +..|+ +.||+ |++|+||+ | ||+.++..+++
T Consensus 319 vcp----leelcDvah~yGAiTFlDEVHA-VGlYG~rGaGvgerdGvm~kvDiIsGTLgKafGcVG---GYIAat~~LvD 390 (570)
T KOG1360|consen 319 VCP----LEELCDVAHKYGAITFLDEVHA-VGLYGPRGAGVGERDGVMHKVDIISGTLGKAFGCVG---GYIAATRKLVD 390 (570)
T ss_pred cCC----HHHHHHHHHHhCceeeeehhhh-hccccCCCCCccccCCcchhhhhcccchhhhccccc---ceehhhhhHHH
Confidence 999 9999999999999999999987 55444222233 55666 46777 69999996 7 89999999999
Q ss_pred hhcccccc--cCCCCcHHHHHHHHHHHHhhchh---hHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeC
Q 011777 341 VMAQKIQF--NTFGGNPVCSAGGLAVLRVIDKE---RRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTD 415 (477)
Q Consensus 341 ~~~~~~~~--~t~~~~~~~~aaa~a~l~~l~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~ 415 (477)
.++....+ .|-+.+|..++.|+++++++..+ .+.+.-+++..++++.|.++ ..|++. ....++-+.+.
T Consensus 391 miRSyAaGFIFTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~--GiPVi~---~pSHIiPv~vg-- 463 (570)
T KOG1360|consen 391 MIRSYAAGFIFTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMEL--GIPVIP---NPSHIIPVRVG-- 463 (570)
T ss_pred HHHHhcCceEEecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHc--CCcccC---CCcceeeeecc--
Confidence 98875433 45567899999999999998754 23444444555666665554 233332 23445555442
Q ss_pred CCCCCccHHHHHHHHHHHH-HcCceeecc-----CCCCCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 416 RKEKTPAKAETAVLFEKLR-ELGVLVGKG-----GLHGNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 416 ~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~-----~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
+.....++.+.|+ ++||++..- ......+||.|.-.+|++.++.+++.|..++++
T Consensus 464 ------da~l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPTP~HT~~mm~~lv~~l~~vw~~ 524 (570)
T KOG1360|consen 464 ------DAALAKQASDILISKHNIYVQAINYPTVARGTERLRIAPTPHHTPQMMNILVNALLDVWNE 524 (570)
T ss_pred ------CHHHHHHHHHHHHHhcCeEEEeccCCcccccceeeecCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 2334556666665 568887432 122467999999999999999999999998865
No 222
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.88 E-value=1.4e-20 Score=189.48 Aligned_cols=304 Identities=14% Similarity=0.152 Sum_probs=183.7
Q ss_pred ChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCe
Q 011777 137 HHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEI 216 (477)
Q Consensus 137 ~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~ 216 (477)
++...++.+.++++++. +.+.+++||++++..++.... .+++.|++..+.++....+ .... |.
T Consensus 50 ~~~~~~~~e~lA~~~g~--~~~~i~~g~~~a~~~~~~~l~--~~gd~Vl~~~~~h~s~~~~-~~~~------------g~ 112 (370)
T TIGR02539 50 KPPIHDFLEDLAEFLGM--DEARVTHGAREGKFAVMHALC--KEGDWVVLDGLAHYTSYVA-AERA------------GL 112 (370)
T ss_pred chHHHHHHHHHHHHhCC--CceEEECChHHHHHHHHHHhh--CCCCEEEECCcccHHHHHH-HHHc------------CC
Confidence 34667888889999865 567789999999999887653 3556677766665544322 1211 22
Q ss_pred eeecCCCCcCCCCCCCHHHHHHHHHHHHhcc---CCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCc
Q 011777 217 HHVVNPDPYHGSFGSDAARYAQDLQDHIDFG---TSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEV 293 (477)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~---~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv 293 (477)
....+|......+..| ++++++.++.. ...++.+|+++.++++.|.+.+ +++|.++|++||+++|+||+
T Consensus 113 ~~~~~~~~~~~~~~~d----~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~----l~~i~~la~~~~~~livDea 184 (370)
T TIGR02539 113 NVKEVPHTGHPEYKVD----PEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPD----AGKVAKVCREKGVPLLLNCA 184 (370)
T ss_pred EEEEEecCCcccCCcC----HHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccC----HHHHHHHHHHcCCeEEEECc
Confidence 2222221100011112 57788777521 1125667777777788887777 89999999999999999999
Q ss_pred ccCccCCCCCCccccccCCCccee--eecccccCccceEEEEeCHHHHHhhcccccccCC--------CCcHHHHHHHHH
Q 011777 294 QTGFGRTGSHYWGFETQGVIPDIV--TMAKGIGNGLPLGAVVTTPEIANVMAQKIQFNTF--------GGNPVCSAGGLA 363 (477)
Q Consensus 294 ~~gfgr~G~~~~~~~~~gv~pDiv--t~sK~lg~G~pig~v~~~~~~~~~~~~~~~~~t~--------~~~~~~~aaa~a 363 (477)
|. +|..+ .+..+..+|++ +++|++++|.|+|++++++++++.+........+ .....++.++.+
T Consensus 185 ~~-~g~~~-----~~~~~~~~di~v~s~sK~~~~~g~~G~l~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (370)
T TIGR02539 185 YT-VGRMP-----VSAKEIGADFIVGSGHKSMAASGPCGVLGMSEEWEDIVLRKSRYSPVKEVELLGCTSRGAPIVTMMA 258 (370)
T ss_pred cc-cCCcC-----CCHHHcCCCEEEeeCcccccCCCCEEEEEECHHHHhhhcccccCCccceeeeecccccccHHHHHHH
Confidence 97 33222 11111234544 7899999877899999999999988754322111 111225555566
Q ss_pred HHHhhchh-hHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCce-ee
Q 011777 364 VLRVIDKE-RRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVL-VG 441 (477)
Q Consensus 364 ~l~~l~~~-~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~-v~ 441 (477)
+++...+. +...+..++.++++++|+++. +..+........++.+++.........+......+.+.|+++||+ +.
T Consensus 259 al~~~~~~l~~~~~~~~~~~~l~~~L~~~g--~~~~~~~~s~t~~v~~~~~~~~~~~~~~~~~~~~~~~~L~e~GI~~ir 336 (370)
T TIGR02539 259 SFPHVVERVKRWDEEVKKTRWFVAELEDIG--FIQLGQKPKEHDLVKFETPGFHEIAQKHKRRGYFLYEELKKRGIHGIR 336 (370)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--cEEEccCCCcCceEEEECCchhHHhhhhccccHHHHHHHHhCCCcccc
Confidence 66542211 112222333457777776641 111111133455665554110000000011235688999999997 66
Q ss_pred ccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 442 KGGLHGNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 442 ~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
++. .+++|++. ..++++|+++++++|++++++
T Consensus 337 ~~~--~~~iRis~-~~~t~e~i~~l~~~L~~~~~~ 368 (370)
T TIGR02539 337 SGQ--TKYFKLSV-YGLTKEQVEYVVDSFEEIVEE 368 (370)
T ss_pred CCc--ceEEEEEe-cCCCHHHHHHHHHHHHHHHHh
Confidence 532 46899986 468999999999999998865
No 223
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.88 E-value=3.3e-20 Score=187.72 Aligned_cols=337 Identities=15% Similarity=0.100 Sum_probs=202.0
Q ss_pred ccCCCCCHHHHHHHHHHHhhcccc------ccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCC
Q 011777 108 VSCGHCHPDVLNAIFEQSKLLQHA------TTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGN 181 (477)
Q Consensus 108 ~~lGh~~p~v~~Av~~~l~~~~~~------~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~ 181 (477)
.-+|..++++++|+.+........ ......+...++.+.++++++. +.++|++||++|+..+++... .++
T Consensus 27 ~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g~--~~~~~~~g~t~a~~~al~~l~--~~g 102 (387)
T PRK09331 27 QRGGILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFLGM--DEARVTHGAREGKFAVMHSLC--KKG 102 (387)
T ss_pred hcCCCCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHhc--CCC
Confidence 346788999999999887542221 1122356689999999999965 578899999999999998653 356
Q ss_pred ceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhcc---CCCCeeEEEec
Q 011777 182 LGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFG---TSGKVAGFIAE 258 (477)
Q Consensus 182 ~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~---~~~~~a~vi~e 258 (477)
++|++...++.+.... .... |...+.++......+..| .+++++.++.. ..+++++|+++
T Consensus 103 d~Vlv~~~~h~s~~~~-~~~~------------G~~~~~v~~~~~~~~~~d----~~~l~~~l~~~~~~~~~~~~lV~l~ 165 (387)
T PRK09331 103 DYVVLDGLAHYTSYVA-AERA------------GLNVREVPKTGYPEYKIT----PEAYAEKIEEVKEETGKPPALALLT 165 (387)
T ss_pred CEEEECCCchHHHHHH-HHHc------------CCEEEEEeCccCcCCCcC----HHHHHHHHHHhhhccCCCCEEEEEE
Confidence 6777766655544322 1111 222222221000011111 47788777632 12367888888
Q ss_pred ccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCcceeeecccccCccceEEEEeCHHH
Q 011777 259 TIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIGNGLPLGAVVTTPEI 338 (477)
Q Consensus 259 pi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pig~v~~~~~~ 338 (477)
.++++.|.+.+ +++|.++|++||+++|+|++|+ +|..+ +....+++...+.+++|+++++.++|++++++++
T Consensus 166 ~~~~~tG~~~~----l~~I~~la~~~g~~livD~a~~-~g~~~---~~~~~~g~D~~~~s~~K~l~~~~~~G~l~~~~~~ 237 (387)
T PRK09331 166 HVDGNYGNLAD----AKKVAKVAHEYGIPFLLNGAYT-VGRMP---VDGKKLGADFIVGSGHKSMAASAPSGVLATTEEY 237 (387)
T ss_pred CCCCCCccccc----HHHHHHHHHHcCCEEEEECCcc-cCCcC---CCHHHcCCCEEEeeCcccccCCCCEEEEEECHHH
Confidence 88888887777 9999999999999999999997 43221 2223345544455678999987899999999998
Q ss_pred HHhhccccccc------CCC--CcHHHHHHHHHHHHhhch-hhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEE
Q 011777 339 ANVMAQKIQFN------TFG--GNPVCSAGGLAVLRVIDK-ERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVG 409 (477)
Q Consensus 339 ~~~~~~~~~~~------t~~--~~~~~~aaa~a~l~~l~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~ 409 (477)
++.+....... .++ .++...++.+++++.+.+ .+..++..++.+++++.|.++. .+.....-.....++.
T Consensus 238 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~l~-g~~~~~~~~~~~~i~~ 316 (387)
T PRK09331 238 ADKVFRTSRKFGVKEVELLGCTLRGAPLVTLMASFPHVVERVKRWDEEVKKARWFVDELEKIE-GFKQLGEKPRNHDLMK 316 (387)
T ss_pred HhhcccccCCCcccceeeeceecCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CEEEeccCcCcCCeEE
Confidence 88765431100 011 122334444555554432 2233444556666766666541 0111110011233333
Q ss_pred EEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 410 MELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 410 i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
++...-.............+.+.|.++||...+.+ .+..+|+.. ..++++|+++++++|++++++
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~~~~-~~~i~ri~~-~g~t~~di~~l~~aL~~i~~~ 381 (387)
T PRK09331 317 FETPSFDEIAKKHKRRGFFLYEELKKRGIHGIKPG-ATKEFKLST-YGLTWEQVEYVADAFKEIAEK 381 (387)
T ss_pred EeCCchhHHhhhccccchhHHHHHHHcCceEEccC-CceEEEEEe-ccCCHHHHHHHHHHHHHHHHh
Confidence 33210000000001123468889999999854332 245667764 448999999999999988764
No 224
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.88 E-value=8.8e-20 Score=183.31 Aligned_cols=332 Identities=20% Similarity=0.157 Sum_probs=226.6
Q ss_pred CEEEeecCCcccccCCCCCHHHHHHHHHHHhhcc---c----cccccCChHHHHHHHHHHhhCCCC-CCEEEEeCChHHH
Q 011777 96 RRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQ---H----ATTIYLHHAIADFAEALASKMPGN-LKVVYFVNSGTEA 167 (477)
Q Consensus 96 ~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~---~----~~~~~~~~~~~~l~~~La~~~~~~-~~~v~~~~sGseA 167 (477)
-.|+|..++. ..+..|.+++.+...... | ..........++.+++++++++.+ .+.|+||.+.|+|
T Consensus 23 ~vylD~aa~~------~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~~eIvft~~tT~a 96 (405)
T COG0520 23 LVYLDNAATS------QKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSSDEIVFTRGTTEA 96 (405)
T ss_pred eEEecCcccc------cCCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChhHH
Confidence 4689977644 468899999998876532 1 111122345678899999999877 4889999999999
Q ss_pred HHHHHHHHH-hccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhc
Q 011777 168 NELAMLMAR-LSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDF 246 (477)
Q Consensus 168 ~~~Al~~ar-~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~ 246 (477)
+........ ...+++.||+.+--+|....-...+... .|.....+|....+.+. .++++++++
T Consensus 97 ln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~---------~Ga~v~~i~~~~~g~~~------~~~~~~~i~- 160 (405)
T COG0520 97 LNLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKR---------TGAKVRVIPLDDDGLLD------LDALEKLIT- 160 (405)
T ss_pred HHHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHh---------cCcEEEEEecCCCCCcC------HHHHHHhcC-
Confidence 998887542 1335588998888888765544333221 13322222221111222 577777665
Q ss_pred cCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCcceeeec--cccc
Q 011777 247 GTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMA--KGIG 324 (477)
Q Consensus 247 ~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~s--K~lg 324 (477)
+++++|.+..+.+..|.+.| +++|.++|+++|+++++|-+|+ ++ ...++...+..|.+.|| |++.
T Consensus 161 ---~~Tklvais~vSn~tG~~~p----v~~I~~la~~~ga~v~VDaaq~-~~-----h~~idv~~l~~Df~afsgHKwl~ 227 (405)
T COG0520 161 ---PKTKLVALSHVSNVTGTVNP----VKEIAELAHEHGALVLVDAAQA-AG-----HLPIDVQELGCDFLAFSGHKWLL 227 (405)
T ss_pred ---CCceEEEEECccccccccch----HHHHHHHHHHcCCEEEEECccc-cC-----ccCCCchhcCCCEEEEccccccc
Confidence 67899999999999999998 9999999999999999999997 32 33455566678999888 9888
Q ss_pred CccceEEEEeCHHHHHhhcccccc------------cCC----------CCcHHHHHHHHHHHHhhch---hhHHHHHHH
Q 011777 325 NGLPLGAVVTTPEIANVMAQKIQF------------NTF----------GGNPVCSAGGLAVLRVIDK---ERRQAHCAD 379 (477)
Q Consensus 325 ~G~pig~v~~~~~~~~~~~~~~~~------------~t~----------~~~~~~~aaa~a~l~~l~~---~~~~~~~~~ 379 (477)
|.-.+|.+.+++++.+.+.+...+ .++ ..|.....+..++++.+++ ++..++.++
T Consensus 228 gP~GiGvLy~r~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~ 307 (405)
T COG0520 228 GPTGIGVLYVRKELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHERE 307 (405)
T ss_pred CCCceEEEEEchHHHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHHH
Confidence 767899999999999887442111 111 1234444444566666554 345566666
Q ss_pred HHHHHHHHHHHHHHhCCCcee---e-eccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCC---------
Q 011777 380 VGSHLLGRLRTLQERHDIIGD---V-RGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLH--------- 446 (477)
Q Consensus 380 ~~~~l~~~L~~l~~~~~~~~~---v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~--------- 446 (477)
+.+++.++|.++ +.+.- . ..++.++.+.+... ...++...|.++||.++.+...
T Consensus 308 L~~~~~~~L~~~----~~v~i~g~~~~~r~~~vsF~v~~~---------~~~dv~~~L~~~gI~vr~g~~ca~p~~~~~~ 374 (405)
T COG0520 308 LTEYLLEGLSEL----PGVEIYGPPDADRGGIVSFNVKGI---------HPHDVATLLDEKGIAVRAGHHCAQPLHRLLG 374 (405)
T ss_pred HHHHHHHHHhcC----CCeEEecCCcccCceEEEEEeCCC---------CHHHHHHHHHhCCeEEEeccccccHHHHhcC
Confidence 666666666554 32211 1 12455666655321 2567899999999888776211
Q ss_pred -CCEEEEeCCCCCcHHHHHHHHHHHHHHHh
Q 011777 447 -GNVFRIKPPMCFTKDDADFLVDALDYSMS 475 (477)
Q Consensus 447 -~~~iRi~p~~~~t~e~i~~~l~~l~~~l~ 475 (477)
...+|+++.+.+|+||||++++.|+++.+
T Consensus 375 ~~~~iR~S~~~YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 375 VDATIRASLHLYNTEEDVDRLLEALKKALA 404 (405)
T ss_pred CCCceEEEEeecCCHHHHHHHHHHHHHHhh
Confidence 12399999999999999999999998753
No 225
>PRK08637 hypothetical protein; Provisional
Probab=99.88 E-value=5e-20 Score=186.59 Aligned_cols=305 Identities=13% Similarity=0.073 Sum_probs=186.6
Q ss_pred ChHHHHHHHHHHhhCC----CCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCC
Q 011777 137 HHAIADFAEALASKMP----GNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIP 212 (477)
Q Consensus 137 ~~~~~~l~~~La~~~~----~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~ 212 (477)
.+.+..+++.+.+..+ .+.++|++|+|+++|+..++++... +++.|++.+++|..+........
T Consensus 47 ~~lr~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~--~gd~Vlv~~P~y~~~~~~~~~~~---------- 114 (388)
T PRK08637 47 PELRDLWQEKMLRENPSLSGKKMSLPIVTNALTHGLSLVADLFVD--QGDTVLLPDHNWGNYKLTFNTRR---------- 114 (388)
T ss_pred HHHHHHHHHHHhccCccccccccceeeEccchHHHHHHHHHHhcC--CCCEEEEcCCCCccHHHHHHHhc----------
Confidence 3444555555544321 1235789999999999998886543 56789999999987754322111
Q ss_pred CCCeeeecCCCC-cCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHH-----hCc
Q 011777 213 QGEIHHVVNPDP-YHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRK-----AGG 286 (477)
Q Consensus 213 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~-----~gi 286 (477)
|...+.+|.. ....++ ++++++.++....+...++++...+|++| ..++++.+++|.++|++ |++
T Consensus 115 --g~~vv~v~~~~~~~~~d------~~~l~~~~~~~~~~~~~~~~~~~P~NPTG-~~~s~~~~~~l~~~~~~~~~~~~~~ 185 (388)
T PRK08637 115 --GAEIVTYPIFDEDGGFD------TDALKEALQAAYNKGKVIVILNFPNNPTG-YTPTEKEATAIVEAIKELADAGTKV 185 (388)
T ss_pred --CCEEEEecccCCCCcCC------HHHHHHHHHhhccCCCEEEEEeCCCCCCC-CCCCHHHHHHHHHHHHHHHhcCCcE
Confidence 2222222210 011122 57777776522122334444443456666 66789999999999886 999
Q ss_pred EEEEcCcccCccCCCCCCcc-c-cccCCCcc--ee---eeccccc-CccceEEEEeC------HHHHHhhccc----ccc
Q 011777 287 VCIADEVQTGFGRTGSHYWG-F-ETQGVIPD--IV---TMAKGIG-NGLPLGAVVTT------PEIANVMAQK----IQF 348 (477)
Q Consensus 287 llI~DEv~~gfgr~G~~~~~-~-~~~gv~pD--iv---t~sK~lg-~G~pig~v~~~------~~~~~~~~~~----~~~ 348 (477)
+||+||+|.+|.+.+...-. + ...+.... ++ ++||.++ .|+|+||++.+ +++++.+... ...
T Consensus 186 ~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 265 (388)
T PRK08637 186 VAVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFITFGTKAGSSQTVKEALEKKVKGLIRS 265 (388)
T ss_pred EEEecccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEEEccccCCcHHHHHHHHHHHHHHhhc
Confidence 99999999988665521111 1 11122223 22 6899987 59999999854 6777766531 112
Q ss_pred cCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHH---HHHHHHhCC---Cceeee-ccceeEEEEEeeCCCCCCc
Q 011777 349 NTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGR---LRTLQERHD---IIGDVR-GRGLMVGMELVTDRKEKTP 421 (477)
Q Consensus 349 ~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~---L~~l~~~~~---~~~~v~-g~g~~~~i~~~~~~~~~~~ 421 (477)
..++.|.+++.++.++|+ +..+.+++++....++++ +.+...+++ .+...+ ..|+++|+.+.
T Consensus 266 ~~~~~s~~~q~a~~~~l~---~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~l~-------- 334 (388)
T PRK08637 266 NISNGPHPSQSAVLRALN---SPEFDKEKQEKFQILKERYEKTKEVLYDGKYDDAWQAYPFNSGYFMCLKLK-------- 334 (388)
T ss_pred ccCCCCcHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccccceEEEEecCC--------
Confidence 334678899999888875 334444444444334333 233333331 122223 34677787762
Q ss_pred cHHHHHHHHHHHH-HcCceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHHHhhC
Q 011777 422 AKAETAVLFEKLR-ELGVLVGKGGLHGNVFRIKPPMCFTKDDADFLVDALDYSMSKL 477 (477)
Q Consensus 422 ~~~~~~~~~~~l~-~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~l 477 (477)
.....++.+.|+ ++||.+...+ .+++||+... .+++++++++++|.++++++
T Consensus 335 -~~~~~~l~~~l~~~~gv~~~~~~--~~~iRi~~~~-~~~~~i~~~~~~l~~~~~~~ 387 (388)
T PRK08637 335 -GVDAEELRVHLLEKYGIGTIALN--ETDLRIAFSC-VEEEDIPELFDSIYKAIKDL 387 (388)
T ss_pred -hHHHHHHHHHHhhhcceEEEecc--CCceEEEeec-CCHHHHHHHHHHHHHHHHhc
Confidence 123457888885 6799887543 5689998755 67999999999999998764
No 226
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.87 E-value=2.7e-19 Score=182.35 Aligned_cols=332 Identities=17% Similarity=0.114 Sum_probs=208.5
Q ss_pred EEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccc---c----CChHHHHHHHHHHhhCCCC-CCEEEEeCChHHHH
Q 011777 97 RYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTI---Y----LHHAIADFAEALASKMPGN-LKVVYFVNSGTEAN 168 (477)
Q Consensus 97 ~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~---~----~~~~~~~l~~~La~~~~~~-~~~v~~~~sGseA~ 168 (477)
.|||..+ .|-.++.+.+++.+.+......... + ......++++.++++++.+ .++|+|++|+++++
T Consensus 20 ~yld~~~------~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~l 93 (403)
T TIGR01979 20 VYLDSAA------TSQKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAASDEEIVFTRGTTESI 93 (403)
T ss_pred EEEeCcc------ccCCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHH
Confidence 6888654 2346789999998876543211111 1 1234568889999998765 56899999999999
Q ss_pred HHHHHHHH--hccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhc
Q 011777 169 ELAMLMAR--LSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDF 246 (477)
Q Consensus 169 ~~Al~~ar--~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~ 246 (477)
..++.... ...+++.|++.+..|++........... .|.....++.......+ .+++++.+.
T Consensus 94 ~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~---------~g~~~~~v~~~~~~~~~------~~~l~~~i~- 157 (403)
T TIGR01979 94 NLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAER---------TGATLKFIPLDDDGTLD------LDDLEKLLT- 157 (403)
T ss_pred HHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHh---------cCcEEEEEecCCCCCCC------HHHHHHHhc-
Confidence 98887542 1235677888777766533211111000 12222212111111111 477777775
Q ss_pred cCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCcceee--eccccc
Q 011777 247 GTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVT--MAKGIG 324 (477)
Q Consensus 247 ~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt--~sK~lg 324 (477)
+++++|++..+++.+|.+.+ +++|.++|++||+++|+|++|+ +|.. .. +.....+|+++ ++|.+|
T Consensus 158 ---~~~~lv~~~~~~~~tG~~~~----~~~i~~~~~~~~~~~ivD~a~~-~g~~---~~--~~~~~~~d~~~~s~~K~~g 224 (403)
T TIGR01979 158 ---EKTKLVAITHVSNVLGTVNP----VEEIAKLAHQVGAKVLVDGAQA-VPHM---PV--DVQALDCDFYVFSGHKMYG 224 (403)
T ss_pred ---cCCeEEEEEcccccccccCC----HHHHHHHHHHcCCEEEEEchhh-cCcc---cc--CccccCCCEEEEecccccC
Confidence 46778888877888888877 8999999999999999999986 3321 12 22233467664 569775
Q ss_pred CccceEEEEeCHHHHHhhccccccc---------------------CCCCcHHHHHHHHHHHHhhch---hhHHHHHHHH
Q 011777 325 NGLPLGAVVTTPEIANVMAQKIQFN---------------------TFGGNPVCSAGGLAVLRVIDK---ERRQAHCADV 380 (477)
Q Consensus 325 ~G~pig~v~~~~~~~~~~~~~~~~~---------------------t~~~~~~~~aaa~a~l~~l~~---~~~~~~~~~~ 380 (477)
+..+|++++++++.+.+.....++ .-+.+...+++..++++.+.+ +...++..++
T Consensus 225 -p~G~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~l 303 (403)
T TIGR01979 225 -PTGIGVLYGKEELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHEL 303 (403)
T ss_pred -CCCceEEEEchHHHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 334899999998877664321110 012345566666777776644 3455666666
Q ss_pred HHHHHHHHHHHHHhCCCceeee-----ccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCC----------
Q 011777 381 GSHLLGRLRTLQERHDIIGDVR-----GRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGL---------- 445 (477)
Q Consensus 381 ~~~l~~~L~~l~~~~~~~~~v~-----g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~---------- 445 (477)
.++++++|+++ +.+.-.. ..+.++.+.+... ...++.+.|.++||.+..+..
T Consensus 304 ~~~l~~~l~~~----~g~~~~~~~~~~~~~~~v~~~~~~~---------~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~~ 370 (403)
T TIGR01979 304 TAYALERLGEI----PGLRIYGPRDAEDRGGIISFNVEGV---------HPHDVGTILDEEGIAVRSGHHCAQPLMRRFG 370 (403)
T ss_pred HHHHHHHHhcC----CCEEEeCCCCccccCceEEEEeCCc---------CHHHHHHHHhhCCEEEcchhhhhHHHHHHhC
Confidence 66666666543 2221111 2355666665211 134677888999999876420
Q ss_pred CCCEEEEeCCCCCcHHHHHHHHHHHHHHHhhC
Q 011777 446 HGNVFRIKPPMCFTKDDADFLVDALDYSMSKL 477 (477)
Q Consensus 446 ~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~l 477 (477)
..+++||+++..+|++|++++++.|+++++.+
T Consensus 371 ~~~~iRiS~~~~~t~~di~~l~~~l~~~~~~~ 402 (403)
T TIGR01979 371 VPATCRASFYIYNTEEDIDALVEALKKVRKFF 402 (403)
T ss_pred CCCEEEEEeccCCCHHHHHHHHHHHHHHHHHh
Confidence 14689999999999999999999999887653
No 227
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.87 E-value=9.7e-20 Score=184.28 Aligned_cols=327 Identities=15% Similarity=0.139 Sum_probs=195.3
Q ss_pred EEeecCCcccccCCCCCHHHHHHHHHHHhhcc---ccccccCChHHHHHHH---HHHhhCCC-CCCEEEEeCChHHHHHH
Q 011777 98 YLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQ---HATTIYLHHAIADFAE---ALASKMPG-NLKVVYFVNSGTEANEL 170 (477)
Q Consensus 98 ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~---~~~~~~~~~~~~~l~~---~La~~~~~-~~~~v~~~~sGseA~~~ 170 (477)
|+|..++.. .++.|++++.+.+.... +....+.......+.+ ++.+.++. +.++|+||+|++|++..
T Consensus 2 yld~aa~~~------~~~~v~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~t~g~teal~~ 75 (382)
T TIGR03403 2 YLDNNATTM------LDPKVKELMDPFFCDIYGNPNSLHQFGTATHPAIAEALDKLYKGINARDLDDIIITSCATESNNW 75 (382)
T ss_pred cccCcCCCC------CCHHHHHHHHHHHHhcCcCCccccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHH
Confidence 788776553 67899999999887532 1111122222333433 33444443 45789999999999999
Q ss_pred HHHHHHh----ccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhc
Q 011777 171 AMLMARL----STGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDF 246 (477)
Q Consensus 171 Al~~ar~----~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~ 246 (477)
+++.+.. ..+++.|++....|+........... .|.....+|......++ .+++++.++
T Consensus 76 ~~~~~~~~~~~~~~~~~vi~~~~e~ps~~~~~~~~~~----------~G~~v~~v~~~~~g~~d------~~~l~~~i~- 138 (382)
T TIGR03403 76 VLKGVYFDEILKGGKNHIITTEVEHPAVRATCAFLES----------LGVEVTYLPINEQGTIT------AEQVREAIT- 138 (382)
T ss_pred HHHHHHHhhcccCCCCEEEEcCCccHHHHHHHHHHHH----------CCCEEEEEecCCCCCCC------HHHHHHhcc-
Confidence 9986531 12345677765444433222111100 12222222211111112 467777775
Q ss_pred cCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCcceeeec--cccc
Q 011777 247 GTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMA--KGIG 324 (477)
Q Consensus 247 ~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~s--K~lg 324 (477)
+++++|++..+++++|.+.+ +++|.++|++||+++|+|++|. +|. . .++.....+|++++| |.+|
T Consensus 139 ---~~t~lv~~~~~~n~tG~~~~----~~~I~~la~~~g~~~ivD~a~~-~g~---~--~~~~~~~~~D~~~~s~~K~~g 205 (382)
T TIGR03403 139 ---EKTALVSVMWANNETGMIFP----IKEIGEICKERGVLFHTDAVQA-IGK---I--PVDVQKAGVDFLSFSAHKFHG 205 (382)
T ss_pred ---cCCeEEEEEcccCCCccccC----HHHHHHHHHHcCCEEEEechhh-cCC---C--ccCccccCCCEEEEcchhhCC
Confidence 35677888878888998887 8999999999999999999987 332 1 123333457888777 9543
Q ss_pred CccceEEEEeCHHHHHhhccccc-------ccCCCCcHHHHHHHHHHHHhhch--hhHHHHHHHHHHHHHHHHHHHHHhC
Q 011777 325 NGLPLGAVVTTPEIANVMAQKIQ-------FNTFGGNPVCSAGGLAVLRVIDK--ERRQAHCADVGSHLLGRLRTLQERH 395 (477)
Q Consensus 325 ~G~pig~v~~~~~~~~~~~~~~~-------~~t~~~~~~~~aaa~a~l~~l~~--~~~~~~~~~~~~~l~~~L~~l~~~~ 395 (477)
...+|+++.+++.. +..... ...++.|..++.++.++++.+.+ +...++.+++.+++.++|.+ .
T Consensus 206 -p~G~g~l~vr~~~~--~~p~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~----~ 278 (382)
T TIGR03403 206 -PKGVGGLYIRKGVE--LTPLFHGGEHMGGRRSGTLNVPYIVAMGEAMRLANEYLDFEKSHVRRLRDRLEDALLE----L 278 (382)
T ss_pred -CCceEEEEECCCCC--CCCcccCCCCCCCcccCCcChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhc----C
Confidence 23478888776531 111110 11334667777777778876543 22334555555555555544 2
Q ss_pred CCceeeec----cceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCC---------------------CCCEE
Q 011777 396 DIIGDVRG----RGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGL---------------------HGNVF 450 (477)
Q Consensus 396 ~~~~~v~g----~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~---------------------~~~~i 450 (477)
+.+..+.. ...++.+.+.. .....+.+.|.++||.++.|.. .++.+
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~i 349 (382)
T TIGR03403 279 PDVFVVGDREHRVPNTILISIKG---------VEGEAMLWDLNKAGIAASTGSACASEDLEANPVMVAIGADKELAHTAI 349 (382)
T ss_pred CCEEEECCCCCCcCCEEEEEeCC---------CCHHHHHHhhccCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeE
Confidence 32222211 12344444421 0134566778899999986411 13579
Q ss_pred EEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 451 RIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 451 Ri~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
|++++..+|++|||++++.|++++++
T Consensus 350 R~s~~~~~t~~did~~~~~l~~~~~~ 375 (382)
T TIGR03403 350 RLSLSRFTTEEEIDYTIEVFKKAVQR 375 (382)
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988764
No 228
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.87 E-value=1.1e-20 Score=194.15 Aligned_cols=339 Identities=12% Similarity=0.048 Sum_probs=184.6
Q ss_pred CCCCCHHHHHHHHHHHhhccccccccCChHHHHHHH-HHHhhCC---CCCC--EEEEeCChHHHHHHHHHHHH---hccC
Q 011777 110 CGHCHPDVLNAIFEQSKLLQHATTIYLHHAIADFAE-ALASKMP---GNLK--VVYFVNSGTEANELAMLMAR---LSTG 180 (477)
Q Consensus 110 lGh~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~-~La~~~~---~~~~--~v~~~~sGseA~~~Al~~ar---~~~~ 180 (477)
.|...|+++.++.+.+....|.......+.++++++ .+.+.+. ...+ +|++|+|+++|+..++.... ...+
T Consensus 104 p~~~~~~~~~~~~~~~~~~~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~al~~~~~~l~~~~ll~p 183 (521)
T TIGR03801 104 LGFDPDAFLYEMCDGIIGDNYPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTAAMCYIFDSLKANELLKK 183 (521)
T ss_pred CCCCCCHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhHhhcCCC
Confidence 345566777777776532222222233344555554 3333322 1223 79999999999999887521 2346
Q ss_pred CceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCC-----CCCCHHHHHHHHHHHHhccCCCCeeEE
Q 011777 181 NLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGS-----FGSDAARYAQDLQDHIDFGTSGKVAGF 255 (477)
Q Consensus 181 ~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~le~~i~~~~~~~~a~v 255 (477)
+++|++.+++|..+........ .++..++++...... |..| .++++++++ .++++|
T Consensus 184 GD~Vlv~~P~y~~y~~~~~l~~-----------~g~~vv~i~~~~~~~~g~~~~~~d----~~~l~~~~~----~~~kai 244 (521)
T TIGR03801 184 GDKIALMTPIFTPYLEIPELPR-----------YDFEVVRIKADEMTEDGTHTWQYP----DKELEKLRD----PSIKAL 244 (521)
T ss_pred CCEEEEeCCCcHHHHHHHHHhc-----------CCcEEEEeecccccccccccCCCC----HHHHHHhcC----CCCcEE
Confidence 7889999999987654322211 022222222111000 2212 356766554 355555
Q ss_pred E-ecccCCCCCeeeCCchhHHHHHHHHHHh--CcEEEEcCcccCccCCCCCCccccccCCCcceeeeccccc-CccceEE
Q 011777 256 I-AETIQGVGGAVELAPGYLKLVYDIVRKA--GGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIG-NGLPLGA 331 (477)
Q Consensus 256 i-~epi~~~~G~~~~~~~~l~~l~~l~~~~--gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg-~G~pig~ 331 (477)
+ ++|. |++| .+.+++.+++|.++|++| +++||+||+|..|......+... ..+...-+.+|||.++ .|||+||
T Consensus 245 ~l~nP~-NPTG-~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~sl~~~-~~~~vI~v~SfSK~fg~~G~RlG~ 321 (521)
T TIGR03801 245 FVVNPS-NPPS-VAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVDDFRSLFAE-LPYNTIGVYSFSKYFGATGWRLGT 321 (521)
T ss_pred EEeCCC-CCCC-CCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcccccchhhh-CCCCEEEEEcchhhccCchhhhhh
Confidence 5 5665 5555 566899999999999987 99999999999875311011111 1111222347999998 5999999
Q ss_pred EEeCHH-----HH--------Hhh------------------------cccccccCCCCcHHHHH--H---HHHHHHhhc
Q 011777 332 VVTTPE-----IA--------NVM------------------------AQKIQFNTFGGNPVCSA--G---GLAVLRVID 369 (477)
Q Consensus 332 v~~~~~-----~~--------~~~------------------------~~~~~~~t~~~~~~~~a--a---a~a~l~~l~ 369 (477)
++++++ ++ +.+ +......|.+.+.+.|. | +.+.++.
T Consensus 322 i~~~~~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al~a~~all~~-- 399 (521)
T TIGR03801 322 IALHKDNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALMDK-- 399 (521)
T ss_pred hhcCchHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHhcc--
Confidence 999864 22 111 11112234444544443 2 3333331
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhCCCce-eeecc-ceeEEEEEeeCCC---CCCccH-----HHHHHHHHHH-HHcCc
Q 011777 370 KERRQAHCADVGSHLLGRLRTLQERHDIIG-DVRGR-GLMVGMELVTDRK---EKTPAK-----AETAVLFEKL-RELGV 438 (477)
Q Consensus 370 ~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~-~v~g~-g~~~~i~~~~~~~---~~~~~~-----~~~~~~~~~l-~~~Gv 438 (477)
.+.+.+.. .+.++++...+.+..+... ..+.. |.++++++..-.. ..+-.. ....+++..| .+.||
T Consensus 400 ~~~y~~~~---~~~~~~R~~~l~~~Lg~~~~~~~~~g~~Y~~~di~~~~~~~~~~~f~~~l~~~~~~~~~~~~L~~e~gV 476 (521)
T TIGR03801 400 ENAYKAET---KDICRRREKLLFRGLGLPLQEDPNDVAYYTLIDLEEWAEKNYGEEFSSYLKKNYSPVDVLFRLAEETGI 476 (521)
T ss_pred chhHHHHH---HHHHHHHHHHHHHhcCCCCcCCCCCeEEEEEeehHHHHHHhcchHHHHHHhccCCHHHHHHHHHHhCCE
Confidence 12333333 3333333333333333211 12233 5666777642100 000000 0123444444 56799
Q ss_pred eeeccCCCC---CEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 439 LVGKGGLHG---NVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 439 ~v~~~~~~~---~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
.+.||..++ +++||+.. ..+++++.++.++|.+++.+
T Consensus 477 ~v~PG~~Fg~~~~~vRisla-~l~~~~~~~~~~rl~~~~~~ 516 (521)
T TIGR03801 477 VLLPGGGFGGPEWSVRVSLA-NLNEYDYAEIGRAIRKILDE 516 (521)
T ss_pred EEeCchhcCCCCCeEEEEec-CCCHHHHHHHHHHHHHHHHH
Confidence 999986554 57999642 26899999999999988753
No 229
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.87 E-value=2.1e-19 Score=184.32 Aligned_cols=336 Identities=15% Similarity=0.090 Sum_probs=209.0
Q ss_pred CCEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccc---ccc----CChHHHHHHHHHHhhCCCC-CCEEEEeCChHH
Q 011777 95 GRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHAT---TIY----LHHAIADFAEALASKMPGN-LKVVYFVNSGTE 166 (477)
Q Consensus 95 G~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~---~~~----~~~~~~~l~~~La~~~~~~-~~~v~~~~sGse 166 (477)
+..|||..+. |..++.|.+++.+.+....... ..+ ..+...++++.++++++.. .++|+|++|+|+
T Consensus 32 ~~iyLd~a~~------~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~ 105 (424)
T PLN02855 32 KLVYLDNAAT------SQKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINASTSREIVFTRNATE 105 (424)
T ss_pred CeEEeeCccc------cCCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCHHH
Confidence 3478887432 3467889999988776532111 111 1123568889999998864 468999999999
Q ss_pred HHHHHHHHH-H-hccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHH
Q 011777 167 ANELAMLMA-R-LSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHI 244 (477)
Q Consensus 167 A~~~Al~~a-r-~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i 244 (477)
++..+++.. . ...+++.|++....|++........... .|+....++.......+ .+++++.+
T Consensus 106 al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~---------~g~~v~~v~~~~~~~~~------~~~l~~~i 170 (424)
T PLN02855 106 AINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQK---------TGAVLKFVGLTPDEVLD------VEQLKELL 170 (424)
T ss_pred HHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHH---------cCCEEEEEecCCCCCcC------HHHHHHHh
Confidence 999988742 1 2345677888777776543221111000 12222221111111111 47788777
Q ss_pred hccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCccee--eeccc
Q 011777 245 DFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIV--TMAKG 322 (477)
Q Consensus 245 ~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDiv--t~sK~ 322 (477)
. .++++|++..+++++|.+.+ +++|.++|+++|+++|+|++|. +|.. . ++.....+|++ ++.|.
T Consensus 171 ~----~~t~lv~i~~~~n~tG~~~~----~~~I~~l~~~~g~~vivD~a~~-~g~~---~--~~~~~~~~d~~~~s~~K~ 236 (424)
T PLN02855 171 S----EKTKLVATHHVSNVLGSILP----VEDIVHWAHAVGAKVLVDACQS-VPHM---P--VDVQTLGADFLVASSHKM 236 (424)
T ss_pred c----cCceEEEEeCccccccccCC----HHHHHHHHHHcCCEEEEEhhhh-cCCc---C--CCchhcCCCEEEeecccc
Confidence 5 36788888888888998887 8999999999999999999995 4322 1 23223346766 46794
Q ss_pred ccCccceEEEEeCHHHHHhhccccccc---------------------CCCCcHHHHHHHHHHHHhhch---hhHHHHHH
Q 011777 323 IGNGLPLGAVVTTPEIANVMAQKIQFN---------------------TFGGNPVCSAGGLAVLRVIDK---ERRQAHCA 378 (477)
Q Consensus 323 lg~G~pig~v~~~~~~~~~~~~~~~~~---------------------t~~~~~~~~aaa~a~l~~l~~---~~~~~~~~ 378 (477)
+ |...+|++++++++.+.+.....++ ..+.|..+.++..++++.+.+ ++..++..
T Consensus 237 ~-gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~ 315 (424)
T PLN02855 237 C-GPTGIGFLWGKSDLLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEV 315 (424)
T ss_pred c-CCCccEEEEEchhhhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 4 3345899999999887764321110 112345556666677776654 34556666
Q ss_pred HHHHHHHHHHHHHHHhCCCcee----eeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHc-CceeeccCC--------
Q 011777 379 DVGSHLLGRLRTLQERHDIIGD----VRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLREL-GVLVGKGGL-------- 445 (477)
Q Consensus 379 ~~~~~l~~~L~~l~~~~~~~~~----v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~~-------- 445 (477)
++.+++++.|.++. ...+... ...++.++.+.+.. ....++.+.|.++ ||.+..+..
T Consensus 316 ~l~~~l~~~L~~~~-g~~i~~~~~~~~~~r~~~v~~~~~~---------~~~~~v~~~L~~~~gI~v~~g~~c~~~~~~~ 385 (424)
T PLN02855 316 ELGTYLYEKLSSVP-GVRIYGPKPSEGVGRAALCAFNVEG---------IHPTDLSTFLDQQHGVAIRSGHHCAQPLHRY 385 (424)
T ss_pred HHHHHHHHHHhcCC-CEEEeCCCcccccCcccEEEEEECC---------cCHHHHHHHhcccCCEEEechhhhhHHHHHH
Confidence 66666666665431 0111111 11224455555521 1135688888887 999876421
Q ss_pred --CCCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 446 --HGNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 446 --~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
..+++|++++...|++||+++++.|+++++.
T Consensus 386 ~g~~~~iRiS~~~ynt~~di~~l~~~l~~~~~~ 418 (424)
T PLN02855 386 LGVNASARASLYFYNTKEEVDAFIHALKDTIAF 418 (424)
T ss_pred hCCCCeEEEEeccCCCHHHHHHHHHHHHHHHHH
Confidence 1357999999999999999999999998764
No 230
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.87 E-value=2.7e-19 Score=182.11 Aligned_cols=329 Identities=15% Similarity=0.139 Sum_probs=197.1
Q ss_pred CEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccc-------cCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHH
Q 011777 96 RRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTI-------YLHHAIADFAEALASKMPGNLKVVYFVNSGTEAN 168 (477)
Q Consensus 96 ~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~-------~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~ 168 (477)
+.|||..+.. ..++.|++++.+.+......... ...+...++++.|+++++.+.+.|+|++|+|+++
T Consensus 4 ~~yld~aa~~------~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~ 77 (402)
T TIGR02006 4 PIYLDYAATT------PVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIGADSREIVFTSGATESN 77 (402)
T ss_pred cEEeeCCcCC------CCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHH
Confidence 4799987644 35899999998887542111110 1123466788899999987777999999999999
Q ss_pred HHHHHHHHh-c-cCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhc
Q 011777 169 ELAMLMARL-S-TGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDF 246 (477)
Q Consensus 169 ~~Al~~ar~-~-~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~ 246 (477)
+.+++.+.. . .+++.|++....|+........... .|+....++.......+ .++++++++
T Consensus 78 ~~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~----------~g~~v~~v~~~~~~~~d------~~~l~~~l~- 140 (402)
T TIGR02006 78 NLAIKGIAHFYKSKGNHIITSKTEHKAVLDTCRYLER----------EGFEVTYLPPKSNGLID------LEELKAAIR- 140 (402)
T ss_pred HHHHHHHHHhhcCCCCEEEECCCccHHHHHHHHHHHh----------cCCEEEEEccCCCCcCC------HHHHHHhcC-
Confidence 999876643 1 2445666655544432222111100 12222222211111111 467777765
Q ss_pred cCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCcceeeec--cccc
Q 011777 247 GTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMA--KGIG 324 (477)
Q Consensus 247 ~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~s--K~lg 324 (477)
+++++|++..+++++|.+.+ +++|.++|++||+++|+|++|+ +|.. .++..+..+|++++| |.+|
T Consensus 141 ---~~~~lv~v~~~~n~tG~~~~----~~~I~~l~~~~g~~livD~a~a-~g~~-----~~~~~~~~~D~~~~s~~K~~g 207 (402)
T TIGR02006 141 ---DDTILVSIMHVNNEIGVIQD----IAAIGEICRERKVFFHVDAAQS-VGKI-----PINVNELKVDLMSISGHKIYG 207 (402)
T ss_pred ---CCCEEEEEECCCcCceeccc----HHHHHHHHHHcCCEEEEEcchh-cCCc-----ccCccccCCCEEEEehhhhcC
Confidence 35788888888899998877 9999999999999999999997 4321 234445678999988 9654
Q ss_pred CccceEEEEeCHHHHHhhccccccc-------CCCCcHHHHHHHHHHHHhhch--hhHHHHHHHHHHHHHHHHHHHHHhC
Q 011777 325 NGLPLGAVVTTPEIANVMAQKIQFN-------TFGGNPVCSAGGLAVLRVIDK--ERRQAHCADVGSHLLGRLRTLQERH 395 (477)
Q Consensus 325 ~G~pig~v~~~~~~~~~~~~~~~~~-------t~~~~~~~~aaa~a~l~~l~~--~~~~~~~~~~~~~l~~~L~~l~~~~ 395 (477)
...+|+++.+++....+....+++ ..+.|...+.+..++++.+++ +...++.+++.++++++|+++
T Consensus 208 -p~G~G~l~~~~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~---- 282 (402)
T TIGR02006 208 -PKGIGALYVRRKPRVRLEALIHGGGHERGMRSGTLPTHQIVGMGEAFRIAKEEMAQDTAHVLALRDRLLNGIKSI---- 282 (402)
T ss_pred -CCceEEEEEccCCCCCCCceecCCCccCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcC----
Confidence 345899988876544333322211 123345555555578877653 233445555555555555443
Q ss_pred CCcee---eecc-ceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccC---------------------CCCCEE
Q 011777 396 DIIGD---VRGR-GLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGG---------------------LHGNVF 450 (477)
Q Consensus 396 ~~~~~---v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~---------------------~~~~~i 450 (477)
+.+.- .... ...+.+.|... + .+.+...+ +|+.+..|. ...+++
T Consensus 283 ~~v~~~~~~~~~~p~~~~v~f~~~-----~----~~~~~~~l--~~i~v~~G~~c~~~~~~~~~~l~~lg~~~~~~~~~v 351 (402)
T TIGR02006 283 EEVYLNGDLEHRVPGNLNVSFNYV-----E----GESLIMAL--KDLAVSSGSACTSASLEPSYVLRALGINDELAHSSI 351 (402)
T ss_pred CCEEEeCCccccCCCeEEEEEeCc-----C----HHHHHHhc--CCEEEechhhcCCCCCCccHHHHHcCCChhhcCceE
Confidence 22211 1101 01112333210 0 12333333 355544331 013689
Q ss_pred EEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 451 RIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 451 Ri~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
|+++...+|++|||++++.|++++++
T Consensus 352 R~S~~~~~t~edid~l~~~l~~~~~~ 377 (402)
T TIGR02006 352 RFTIGRFTTEEEIDYAVKLVKSAIDK 377 (402)
T ss_pred EEEecCCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988753
No 231
>PRK10534 L-threonine aldolase; Provisional
Probab=99.87 E-value=5.6e-20 Score=182.55 Aligned_cols=321 Identities=17% Similarity=0.172 Sum_probs=196.4
Q ss_pred EEeecCCcccccCCCCCHHHHHHHHHHHhhcccccccc-CChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHH
Q 011777 98 YLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIY-LHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMAR 176 (477)
Q Consensus 98 ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~-~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar 176 (477)
.|||.++..+ | .+|.+.+++.+..... ..| +.+...+|.+.|+++++. +.+++++||++++..++....
T Consensus 1 ~~~~~~~~~~---~-p~~~~~~a~~~~~~~~----~~Y~~~~~~~~L~~~la~~~g~--~~~~v~~~g~~a~~~~l~~~~ 70 (333)
T PRK10534 1 MIDLRSDTVT---R-PSRAMLEAMMAAPVGD----DVYGDDPTVNALQDYAAELSGK--EAALFLPTGTQANLVALLSHC 70 (333)
T ss_pred CcccccccCC---C-CCHHHHHHHHhccCCC----cccCCCHHHHHHHHHHHHHhCC--CeEEEeCchHHHHHHHHHHhc
Confidence 3788877653 4 7899999987744332 234 678889999999999854 566799999999988887542
Q ss_pred hccCCceEEEEccCccCCcc-cccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhcc--CCCCee
Q 011777 177 LSTGNLGMIALRNAYHGGSS-GTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFG--TSGKVA 253 (477)
Q Consensus 177 ~~~~~~~ii~~~~~yhG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~--~~~~~a 253 (477)
.++++|++..++|..... ......+ +...+..+.. ..+..| ++++++.+... +..+++
T Consensus 71 --~~gd~vi~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~--~~~~~d----~~~l~~~i~~~~~~~~~~~ 131 (333)
T PRK10534 71 --ERGEEYIVGQAAHNYLYEAGGAAVLG-----------SIQPQPIDAA--ADGTLP----LDKVAAKIKPDDIHFARTR 131 (333)
T ss_pred --CCCCeeEEechhhhhHhcCCchHHhc-----------CceEEeecCC--CCCCCC----HHHHHHhhcccCcCcccce
Confidence 245667766554431111 0001100 1111211111 111112 46777766411 001455
Q ss_pred EEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCC---CCCCccccccCCCc-ceeeecccccCccce
Q 011777 254 GFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRT---GSHYWGFETQGVIP-DIVTMAKGIGNGLPL 329 (477)
Q Consensus 254 ~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~---G~~~~~~~~~gv~p-Divt~sK~lg~G~pi 329 (477)
+|+++.++ +|. +.+.+.+++|.++|++||+++|+||+|. |+.. + .... ......+ -+++|||+++. ++
T Consensus 132 lv~l~np~--~G~-v~~~~~l~~i~~~~~~~~~~lvvDEA~~-~~~~~~~~-~~~~-~~~~~~~~~~~s~SK~~~~--~~ 203 (333)
T PRK10534 132 LLSLENTH--NGK-VLPREYLKQAWEFTRERNLALHVDGARI-FNAVVAYG-CELK-EITQYCDSFTICLSKGLGT--PV 203 (333)
T ss_pred EEEEecCC--CCe-ecCHHHHHHHHHHHHHcCCeEEeeHHHH-HHHHHHcC-CCHH-HHHhcCCEEEEEeEcCCCC--cc
Confidence 56655322 364 4578888999999999999999999876 4321 2 1110 1111111 24579998764 57
Q ss_pred E-EEEeCHHHHHhhccccccc--CCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccce
Q 011777 330 G-AVVTTPEIANVMAQKIQFN--TFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGL 406 (477)
Q Consensus 330 g-~v~~~~~~~~~~~~~~~~~--t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~ 406 (477)
| ++++++++++.+....... .++.+.++++++.++|+.. .+.+++..+.++++.+.|+++ +. ...++.+.
T Consensus 204 G~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~--~~~~~~~~~~r~~l~~~L~~~----g~-~~~~~~~n 276 (333)
T PRK10534 204 GSLLVGNRDYIKRARRWRKMTGGGMRQAGILAAAGLYALKHN--VARLQEDHDNAAWLAEQLREA----GA-DVMRQDTN 276 (333)
T ss_pred cceEEcCHHHHHHHHHHHHHhCCchhhHHHHHHHHHHHHHhh--HHHHHHHHHHHHHHHHHHHhC----CC-ccCCCCce
Confidence 8 6888999998887543222 2334456677777777532 233333444456666666653 32 22334677
Q ss_pred eEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHHHh
Q 011777 407 MVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADFLVDALDYSMS 475 (477)
Q Consensus 407 ~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~ 475 (477)
|+++.+.. ....++.+.|+++||++.++. .+|+...+.+|++++++++++|++.+.
T Consensus 277 fv~~~~~~---------~~~~~~~~~l~~~gi~v~~~~----~~rl~~~~r~t~e~~~~~~~~l~~~~~ 332 (333)
T PRK10534 277 MLFVRVGE---------EQAAALGEYMRERNVLINASP----IVRLVTHLDVSREQLAEVVAHWRAFLA 332 (333)
T ss_pred EEEEECCc---------hhHHHHHHHHHHcCeeecCCc----eEEEEEEeCCCHHHHHHHHHHHHHHhc
Confidence 88776621 124567889999999998752 578877667899999999999998764
No 232
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.87 E-value=8.5e-20 Score=185.46 Aligned_cols=322 Identities=14% Similarity=0.091 Sum_probs=206.5
Q ss_pred CCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCCC-CEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCc
Q 011777 113 CHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGNL-KVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAY 191 (477)
Q Consensus 113 ~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~-~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~y 191 (477)
-+++|++|+.+... .|. .....+...+++++++++++.+. +.+++++||+++++.++... ..++++|++.+++|
T Consensus 20 ~~~~V~~a~~~~~~--~~~-~~~~~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~~--~~~Gd~Vlv~~~~~ 94 (401)
T PLN02409 20 IPERVLRAMNRPNE--DHR-SPAFPALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTNT--LSPGDKVVSFRIGQ 94 (401)
T ss_pred CCHHHHHHhcCCCC--CCC-CHHHHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhc--CCCCCEEEEeCCCc
Confidence 46777777754321 122 12234567788888988887653 57899999999999988754 34678899999888
Q ss_pred cCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCc
Q 011777 192 HGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAP 271 (477)
Q Consensus 192 hG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~ 271 (477)
++.....+.. . .|.....++......++ .+++++.++....+++++|++..+.+.+|.+.+
T Consensus 95 ~~~~~~~~~~-~----------~g~~v~~v~~~~~~~~~------~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~-- 155 (401)
T PLN02409 95 FSLLWIDQMQ-R----------LNFDVDVVESPWGQGAD------LDILKSKLRQDTNHKIKAVCVVHNETSTGVTND-- 155 (401)
T ss_pred hhHHHHHHHH-H----------cCCceEEEECCCCCCCC------HHHHHHHHhhCcCCCccEEEEEeecccccccCC--
Confidence 7653211110 0 02122222111111111 478888887321136788888887778888877
Q ss_pred hhHHHHHHH--HHHhCcEEEEcCcccCccCCCCCCccccccCCCcceee--ecccccCccceEEEEeCHHHHHhhcccc-
Q 011777 272 GYLKLVYDI--VRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVT--MAKGIGNGLPLGAVVTTPEIANVMAQKI- 346 (477)
Q Consensus 272 ~~l~~l~~l--~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt--~sK~lg~G~pig~v~~~~~~~~~~~~~~- 346 (477)
+++|.++ |+++|+++|+|++|+ +|. .. ++......|+++ .+|+++++.++|+++.++++++.+....
T Consensus 156 --~~~i~~l~~~~~~g~~~vvD~v~s-~g~---~~--id~~~~~~D~~~~s~~K~l~~P~G~G~l~~~~~~~~~~~~~~~ 227 (401)
T PLN02409 156 --LAGVRKLLDCAQHPALLLVDGVSS-IGA---LD--FRMDEWGVDVALTGSQKALSLPTGLGIVCASPKALEASKTAKS 227 (401)
T ss_pred --HHHHHHHHhhhccCcEEEEEcccc-cCC---cc--ccccccCccEEEEcCccccCcCCCcceeEECHHHHHHHhcCCC
Confidence 8888888 999999999999997 432 22 232233456664 5699988778999999999887765321
Q ss_pred --------------ccc---CCCCcHHHHHHHHHHHHhhch---hhHHHHHHHHHHHHHHHHHHHHHhCCCceee-ec-c
Q 011777 347 --------------QFN---TFGGNPVCSAGGLAVLRVIDK---ERRQAHCADVGSHLLGRLRTLQERHDIIGDV-RG-R 404 (477)
Q Consensus 347 --------------~~~---t~~~~~~~~aaa~a~l~~l~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v-~g-~ 404 (477)
..+ .++.|...+.+..++++.+.+ ++..++.+++.+++++.|.++ ........ .. .
T Consensus 228 ~~~~~~~~~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~--g~~~~~~~~~~~s 305 (401)
T PLN02409 228 PRVFFDWADYLKFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAW--GLKLCTKKPEWRS 305 (401)
T ss_pred CCeecCHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc--CCeeccCChhhcc
Confidence 011 234556667777788887654 345667777777777777654 12222211 11 1
Q ss_pred ceeEEEEEeeCCCCCCccHHHHHHHHHHHH-HcCceeeccC-C-CCCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 405 GLMVGMELVTDRKEKTPAKAETAVLFEKLR-ELGVLVGKGG-L-HGNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 405 g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~-~-~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
+.+.++.+. ......++.+.|. +.|+.+..|. . .+..||++....++++|+..++++|++++.+
T Consensus 306 ~~v~~~~~p--------~~~~~~~l~~~l~~~~~i~i~~G~~~~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~ 372 (401)
T PLN02409 306 DTVTAVVVP--------EGIDSAEIVKNAWKKYNLSLGLGLNKVAGKVFRIGHLGNVNELQLLGALAGVEMVLKD 372 (401)
T ss_pred cceEEEeCC--------CCCCHHHHHHHHHHhCCEEEEcCCCcccCCEEEEcCCCCCCHHHHHHHHHHHHHHHHH
Confidence 233444431 1112345666654 6699998763 2 4689999999999999999999999999875
No 233
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.86 E-value=2.8e-20 Score=186.20 Aligned_cols=288 Identities=13% Similarity=0.108 Sum_probs=182.6
Q ss_pred ccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCC
Q 011777 134 IYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQ 213 (477)
Q Consensus 134 ~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~ 213 (477)
.|+.....+|.+.++++++.+.++|++|+|++|++..+++.... .|.+.|++..++|..+...+...
T Consensus 56 ~Yp~~~~~~Lr~aia~~~~~~~~~I~it~Gs~~~i~~~~~~~~~-~g~d~vlv~~P~y~~y~~~~~~~------------ 122 (354)
T PRK04635 56 RYPECQPPELINAYSAYAGVAPEQILTSRGADEAIELLIRAFCE-PGQDSIACFGPTYGMYAISAETF------------ 122 (354)
T ss_pred cCCCCCHHHHHHHHHHHhCcCHHHEEEeCCHHHHHHHHHHHhcC-CCCCeEEEcCCChHHHHHHHHHc------------
Confidence 35555568899999999888888999999999999999885532 23378999999997654332221
Q ss_pred CCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCc
Q 011777 214 GEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEV 293 (477)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv 293 (477)
|...+.+|... .+..| .+.++. + .++++|++...+|++|.+. +.+.+++|.+.|+ +++||+||+
T Consensus 123 -g~~v~~v~~~~--~~~~~----~~~l~~-~-----~~~~li~i~nP~NPTG~~~-~~~~l~~l~~~~~--~~~vivDea 186 (354)
T PRK04635 123 -NVGVKALPLTA--DYQLP----LDYIEQ-L-----DGAKLVFICNPNNPTGTVI-DRADIEQLIEMTP--DAIVVVDEA 186 (354)
T ss_pred -CCEEEEEecCC--CCCCC----HHHHHh-c-----cCCCEEEEeCCCCCCCccC-CHHHHHHHHHhCC--CcEEEEeCc
Confidence 22222222211 12211 244432 2 2455555556667777554 5666666666655 599999999
Q ss_pred ccCccCCCCCCccccccCCCcc---eeeeccccc-CccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhc
Q 011777 294 QTGFGRTGSHYWGFETQGVIPD---IVTMAKGIG-NGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVID 369 (477)
Q Consensus 294 ~~gfgr~G~~~~~~~~~gv~pD---ivt~sK~lg-~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~ 369 (477)
|..|.... ... +.....+. +-+|||.+| .|+|+||+++++++++.+.... ..++.+...+.++.++|+...
T Consensus 187 y~~~~~~~-s~~--~~~~~~~~~iv~~S~SK~~~l~GlRlG~~i~~~~~~~~l~~~~--~~~~~~~~~~~~a~~~l~~~~ 261 (354)
T PRK04635 187 YIEFCPEY-SVA--DLLASYPNLVVLRTLSKAFALAGARCGFTLANEELIEILMRVI--APYPVPLPVSEIATQALSEAG 261 (354)
T ss_pred hHhhccCc-chH--HHHhhCCCEEEEechHHHhhhhHHHHhhhhCCHHHHHHHHhhc--CCCCCCHHHHHHHHHHHhccc
Confidence 98875321 111 11111223 337999998 7999999999999998876432 346667777777777775321
Q ss_pred hh---hHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCC-
Q 011777 370 KE---RRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGL- 445 (477)
Q Consensus 370 ~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~- 445 (477)
.+ +..+++++.++++.+.|++ ++.+...++.|.|+++.+. + ..++.+.|.++||.+..++.
T Consensus 262 ~~~~~~~~~~~~~~r~~l~~~L~~----~~~~~~~~~~g~f~~~~~~--------~---~~~~~~~l~~~gv~v~~~~~~ 326 (354)
T PRK04635 262 LARMKFQVLDLNAQGARLQAALSM----YGGAKVLEGNGNYVLAKFD--------D---VDAVFKALWDAGIVARAYKDP 326 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh----CCCceECCCCCcEEEEECC--------C---HHHHHHHHHHCCEEEEECCCC
Confidence 11 2223344444455555443 3423334556788887662 1 34677888999999976532
Q ss_pred -CCCEEEEeCCCCCcHHHHHHHHHHHHHH
Q 011777 446 -HGNVFRIKPPMCFTKDDADFLVDALDYS 473 (477)
Q Consensus 446 -~~~~iRi~p~~~~t~e~i~~~l~~l~~~ 473 (477)
.++++||+. .+++|++.++++|++-
T Consensus 327 ~~~~~lRis~---~~~e~~~~l~~al~~~ 352 (354)
T PRK04635 327 RLANCIRFSF---SNRAETDKLIGLIRNQ 352 (354)
T ss_pred CCCCeEEEEe---CCHHHHHHHHHHHHHh
Confidence 246899964 4789999999999764
No 234
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.86 E-value=2.9e-19 Score=182.12 Aligned_cols=336 Identities=16% Similarity=0.097 Sum_probs=197.5
Q ss_pred CCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhcccccc--cc-----CChHHHHHHHHHHhhCCCCCCEEEEeCChHH
Q 011777 94 NGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATT--IY-----LHHAIADFAEALASKMPGNLKVVYFVNSGTE 166 (477)
Q Consensus 94 dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~--~~-----~~~~~~~l~~~La~~~~~~~~~v~~~~sGse 166 (477)
++..|||..+ +|-.++.+.+++.+.++....... .+ ......++ +++ ++++.+.++|+|++|+|+
T Consensus 26 ~~~iyld~~a------~g~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~l~g~~~~~v~~~~~~t~ 97 (406)
T TIGR01814 26 NAVIYLDGNS------LGLMPKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESL-LKL-RLVGAKEDEVVVMNTLTI 97 (406)
T ss_pred CCcEEecCCC------cCcCcHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhh-ccc-cccCCCCCcEEEeCCchH
Confidence 4457888543 233578899999887765321111 11 11222233 345 677777788999999999
Q ss_pred HHHHHHHHHHhccCCc-eEEEEccCccCCcccccccccCCCCCCCCCCCCeee----ecCCCCcCCCCCCCHHHHHHHHH
Q 011777 167 ANELAMLMARLSTGNL-GMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHH----VVNPDPYHGSFGSDAARYAQDLQ 241 (477)
Q Consensus 167 A~~~Al~~ar~~~~~~-~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~le 241 (477)
++..+++......+++ .|++....|............. .|+.. +..+.......+ .++++
T Consensus 98 ~l~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~---------~g~~~~~~~~~~~~~~~g~~~------~~~l~ 162 (406)
T TIGR01814 98 NLHLLLASFYKPTPKRYKILLEAKAFPSDHYAIESQLQL---------HGLTVEESMVQIEPREEETLR------LEDIL 162 (406)
T ss_pred HHHHHHHHhcCCcCCccEEEecCCCCChHHHHHHHHHHh---------cCCCcccceEEeccCCCCccC------HHHHH
Confidence 9999887642211223 4554444554322211110000 01111 111111000111 46777
Q ss_pred HHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCcceeeecc
Q 011777 242 DHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMAK 321 (477)
Q Consensus 242 ~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK 321 (477)
+.++.. .+++++|+++.+++.+|.+.| +++|.++|++||+++|+|++|+ +|.. .+.++.+++...+.+..|
T Consensus 163 ~~~~~~-~~~t~lv~~~~v~~~tG~~~~----~~~i~~~~~~~g~~~~vD~aq~-~G~~---~id~~~~gvD~~~~s~hK 233 (406)
T TIGR01814 163 DTIEKN-GDDIAVILLSGVQYYTGQLFD----MAAITRAAHAKGALVGFDLAHA-VGNV---PLDLHDWGVDFACWCTYK 233 (406)
T ss_pred HHHHhc-CCCeEEEEEeccccccceecC----HHHHHHHHHHcCCEEEEEcccc-cCCc---ccccccCCCCEEEEcCcc
Confidence 776532 257899999999999999888 9999999999999999999998 4432 233333444333334559
Q ss_pred cccCccceEEEEeCHHHHHhhcccccc-------------c----------CCCCcHHHHHHHHHHHHhhch---hhHHH
Q 011777 322 GIGNGLPLGAVVTTPEIANVMAQKIQF-------------N----------TFGGNPVCSAGGLAVLRVIDK---ERRQA 375 (477)
Q Consensus 322 ~lg~G~pig~v~~~~~~~~~~~~~~~~-------------~----------t~~~~~~~~aaa~a~l~~l~~---~~~~~ 375 (477)
.+++|.. |+++..++..+.+.....+ . ..+.|..++++..++|+.+.+ +...+
T Consensus 234 ~l~g~pG-~~l~v~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~ 312 (406)
T TIGR01814 234 YLNAGPG-AGAFVHEKHAHTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGMEALRK 312 (406)
T ss_pred ccCCCCC-eEEEEehhhhhhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 9987654 5555544333223221000 0 112356677777788888754 44566
Q ss_pred HHHHHHHHHHHHHHHHHH---hCCCce--eeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCCCCEE
Q 011777 376 HCADVGSHLLGRLRTLQE---RHDIIG--DVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLHGNVF 450 (477)
Q Consensus 376 ~~~~~~~~l~~~L~~l~~---~~~~~~--~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~i 450 (477)
+..++.+++++.|.++.. ...+.. +...++.++.+.+. . ....+.+.|.++||.+...+ ++.+
T Consensus 313 ~~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~-~---------~~~~~~~~L~~~gi~v~~~~--~~~i 380 (406)
T TIGR01814 313 KSLLLTDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSLTHP-V---------PGKAVFQALIKRGVIGDKRE--PSVI 380 (406)
T ss_pred HHHHHHHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEEEec-C---------CHHHHHHHHHHCCEEEeccC--CCeE
Confidence 677777777777665411 011111 11223445555542 0 13568888999999886432 4689
Q ss_pred EEeC-CCCCcHHHHHHHHHHHHHHH
Q 011777 451 RIKP-PMCFTKDDADFLVDALDYSM 474 (477)
Q Consensus 451 Ri~p-~~~~t~e~i~~~l~~l~~~l 474 (477)
|++| ++.+|++||++++++|++++
T Consensus 381 RiS~~~~~nt~~did~l~~~l~~~~ 405 (406)
T TIGR01814 381 RVAPVPLYNTFVDVYDAVNVLEEIL 405 (406)
T ss_pred EEechhccCCHHHHHHHHHHHHHHh
Confidence 9999 68999999999999998865
No 235
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.86 E-value=4.4e-19 Score=178.74 Aligned_cols=320 Identities=19% Similarity=0.204 Sum_probs=214.7
Q ss_pred EEeecCCcccccCCCCCHHHHHHHHHHHhhccccc---cc----cCChHHHHHHHHHHhhCCCCC-CEEEEeCChHHHHH
Q 011777 98 YLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHAT---TI----YLHHAIADFAEALASKMPGNL-KVVYFVNSGTEANE 169 (477)
Q Consensus 98 ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~---~~----~~~~~~~~l~~~La~~~~~~~-~~v~~~~sGseA~~ 169 (477)
|||..+ .|..++.|.+++.+.+....... .. ...+...++++.++++++.+. +.|+|++|+|+|++
T Consensus 2 Yld~~~------~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~ 75 (371)
T PF00266_consen 2 YLDNAG------TGPMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAPPDEEVVFTSNGTEALN 75 (371)
T ss_dssp EEBTSS------S-B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHH
T ss_pred EeeCCC------ccCCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCccccccccccccchhhh
Confidence 777543 23578999999999887642211 11 113446788999999998877 78999999999999
Q ss_pred HHHHHHHh-ccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccC
Q 011777 170 LAMLMARL-STGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGT 248 (477)
Q Consensus 170 ~Al~~ar~-~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~ 248 (477)
.++...+. ..++++|++....|++........... .|.....++.......+ ++++++.|.
T Consensus 76 ~~~~~l~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~---------~g~~v~~i~~~~~~~~~------~~~~~~~l~--- 137 (371)
T PF00266_consen 76 AVASSLLNPLKPGDEVLVTSNEHPSNRYPWEEIAKR---------KGAEVRVIPADPGGSLD------LEDLEEALN--- 137 (371)
T ss_dssp HHHHHHHHHGTTTCEEEEEESSHHHHHHHHHHHHHH---------TTEEEEEEEEGTTSSCS------HHHHHHHHH---
T ss_pred hhhhcccccccccccccccccccccccccccccccc---------chhhhccccccccchhh------hhhhhhhhc---
Confidence 99987743 456788999999888775222222100 12222222221222222 578888886
Q ss_pred CCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCcceeeec--ccccCc
Q 011777 249 SGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMA--KGIGNG 326 (477)
Q Consensus 249 ~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~s--K~lg~G 326 (477)
+++.+|++..+.+..|.+.| +++|.++|+++|+++++|-+|+ +|.. .++.....+|++++| | ++|+
T Consensus 138 -~~~~lv~~~~~~~~tG~~~p----i~~I~~~~~~~~~~~~vD~~~~-~g~~-----~id~~~~~~D~~~~s~~K-l~gp 205 (371)
T PF00266_consen 138 -PDTRLVSISHVENSTGVRNP----IEEIAKLAHEYGALLVVDAAQS-AGCV-----PIDLDELGADFLVFSSHK-LGGP 205 (371)
T ss_dssp -TTESEEEEESBETTTTBBSS----HHHHHHHHHHTTSEEEEE-TTT-TTTS-----S--TTTTTESEEEEESTS-TTSS
T ss_pred -cccceEEeecccccccEEee----eceehhhhhccCCceeEechhc-cccc-----cccccccccceeeecccc-cCCC
Confidence 68899999999889998888 9999999999999999999997 5432 234445567888776 9 9887
Q ss_pred cceEEEEeCHHHHHhhcccccccC------------------C---CCcHHHHHHHHHHHHhhch---hhHHHHHHHHHH
Q 011777 327 LPLGAVVTTPEIANVMAQKIQFNT------------------F---GGNPVCSAGGLAVLRVIDK---ERRQAHCADVGS 382 (477)
Q Consensus 327 ~pig~v~~~~~~~~~~~~~~~~~t------------------~---~~~~~~~aaa~a~l~~l~~---~~~~~~~~~~~~ 382 (477)
..+|+++.+++..+.+.+...++. | ..|.....+..++++.+.+ ++..++..++.+
T Consensus 206 ~G~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~ 285 (371)
T PF00266_consen 206 PGLGFLYVRPEAIERLRPAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAE 285 (371)
T ss_dssp STEEEEEEEHHHHHHHHTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchhhheehhhhhhccccccccccccccccchhcccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHH
Confidence 789999999998888854321111 1 2355566666678887744 344566666666
Q ss_pred HHHHHHHHHHHhCCCce-----eeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCCC----------
Q 011777 383 HLLGRLRTLQERHDIIG-----DVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLHG---------- 447 (477)
Q Consensus 383 ~l~~~L~~l~~~~~~~~-----~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~---------- 447 (477)
++++.|.++ +.+. .....+.++.+.+... ....+.+.|.++||.+..|....
T Consensus 286 ~~~~~l~~~----~~~~~~~~~~~~~~~~i~~~~~~~~---------~~~~~~~~L~~~~I~~~~G~~~~~~~~~~~~~~ 352 (371)
T PF00266_consen 286 YLREALEEL----PGIEVLGPDDEPRRPSIVSFNLPGS---------DADDVVKYLEERGIAVSTGSACAGPSLDILGMG 352 (371)
T ss_dssp HHHHHHHHT----TTEEESSSSCGGBGTTEEEEEETTS---------SHHHHHHHHHHHTEEEEESTTTCHHHHHHHHTT
T ss_pred HHHhhhhcC----CceeEeeecccccccceEEEeecCC---------CHHHHHHHHhhcCEEEeccCcccHHHHHHhCCC
Confidence 666666664 3221 1233456666666211 24678889999999998853322
Q ss_pred CEEEEeCCCCCcHHHHHHH
Q 011777 448 NVFRIKPPMCFTKDDADFL 466 (477)
Q Consensus 448 ~~iRi~p~~~~t~e~i~~~ 466 (477)
+++|++++..+|++|||++
T Consensus 353 ~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 353 GVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp TEEEEE-GTTSSHHHHHHH
T ss_pred CEEEEeccCCCCHHHHhhC
Confidence 7999999999999999975
No 236
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.86 E-value=2.4e-19 Score=180.02 Aligned_cols=330 Identities=15% Similarity=0.116 Sum_probs=193.2
Q ss_pred CCCCCHHHHHHHHHHHhhccccc------cccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCce
Q 011777 110 CGHCHPDVLNAIFEQSKLLQHAT------TIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLG 183 (477)
Q Consensus 110 lGh~~p~v~~Av~~~l~~~~~~~------~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ 183 (477)
=|+..|++++++.+.......+. ....++...++.++++++++. +.+++++||++++..++.... .+++.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~--~~i~~~~g~t~al~~~l~~~~--~~gd~ 85 (361)
T cd06452 10 GGRLTPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFLGM--DEARVTPGAREGKFAVMHSLC--EKGDW 85 (361)
T ss_pred CCCCCHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHcCC--ceEEEeCCHHHHHHHHHHHhc--CCCCE
Confidence 36778999999888764322211 112246688999999999865 789999999999999988653 35567
Q ss_pred EEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccC---CCCeeEEEeccc
Q 011777 184 MIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGT---SGKVAGFIAETI 260 (477)
Q Consensus 184 ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~---~~~~a~vi~epi 260 (477)
|++...+|++....+ .. .|...+.++......+..| .+++++.++... ..++++|++...
T Consensus 86 Vl~~~~~~~~~~~~~-~~------------~g~~~~~v~~~~~~~~~~d----~~~l~~~l~~~~~~~~~~~~lv~l~~p 148 (361)
T cd06452 86 VVVDGLAHYTSYVAA-ER------------AGLNVREVPNTGHPEYHIT----PEGYAEVIEEVKDEFGKPPALALLTHV 148 (361)
T ss_pred EEEcCCcchHHHHHH-Hh------------cCCEEEEEecCCCCCcccC----HHHHHHHHHHHhhccCCCceEEEEECC
Confidence 777766665543211 11 1222222221111111112 467777765211 135677777776
Q ss_pred CCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCcceeeecccccCccceEEEEeCHHHHH
Q 011777 261 QGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIGNGLPLGAVVTTPEIAN 340 (477)
Q Consensus 261 ~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pig~v~~~~~~~~ 340 (477)
+++.|.+.+ +++|.++|+++|+++|+||+|. +|.. .+....++....+.+++|++++|.++|++++++++++
T Consensus 149 ~n~tG~~~~----~~~i~~~~~~~~~~vivD~a~~-~g~~---~~~~~~~~~d~~~~s~~K~l~~~~~~G~l~~~~~~~~ 220 (361)
T cd06452 149 DGNYGNLHD----AKKIAKVCHEYGVPLLLNGAYT-VGRM---PVSGKELGADFIVGSGHKSMAASAPIGVLATTEEWAD 220 (361)
T ss_pred CCCCeeecc----HHHHHHHHHHcCCeEEEECCcc-cCCc---CCCHHHcCCCEEEecCCccccCCCCeEEEEECHHHHH
Confidence 777786655 8999999999999999999997 3321 1222334444445568899987789999999999988
Q ss_pred hhcccccc------cCCCC--cHHHHHHHHHHHHhhch-hhHHHHHHHHHHHHHHHHHHHHHhCCCceee---eccceeE
Q 011777 341 VMAQKIQF------NTFGG--NPVCSAGGLAVLRVIDK-ERRQAHCADVGSHLLGRLRTLQERHDIIGDV---RGRGLMV 408 (477)
Q Consensus 341 ~~~~~~~~------~t~~~--~~~~~aaa~a~l~~l~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v---~g~g~~~ 408 (477)
.+...... ..+++ +...+++++++++.+.+ -+...+..+..+++++.|+++ +.+... .+...++
T Consensus 221 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~l----~g~~v~~~~~~~~n~~ 296 (361)
T cd06452 221 IVFRTSQMFKIKEVELLGCTLRGAPLVTLMASFPHVKERVKRWDEEVEKARWFVAELEKI----EGIKQLGEKPKNHDLM 296 (361)
T ss_pred HHhccccccccceeeeeccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCeEEECCCCCCCceE
Confidence 87543211 11111 12234444555544321 111222223335666665543 211111 2233444
Q ss_pred EEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHHH
Q 011777 409 GMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADFLVDALDYSM 474 (477)
Q Consensus 409 ~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l 474 (477)
.++...-............++.+.|+++||.+...+ .++++|+.. ..++++|++.++++|+++.
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~~~~-~~~~~ri~~-~g~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 297 FFETPSFDEIAKKHKRRGYFLYSELKKRGIHGIKPG-LTRYFKLST-YGLTWEQVEYVVDAFKEIA 360 (361)
T ss_pred EEEcCCcchhhhhccccchhHHHHHHHcCceEEcCC-CceEEEEEe-cCCCHHHHHHHHHHHHHHh
Confidence 444310000000000112358899999999965433 245889975 3379999999999998764
No 237
>PLN02397 aspartate transaminase
Probab=99.85 E-value=3e-19 Score=182.55 Aligned_cols=275 Identities=12% Similarity=0.085 Sum_probs=157.0
Q ss_pred eCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHH
Q 011777 161 VNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDL 240 (477)
Q Consensus 161 ~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 240 (477)
+.+|+.+..+++.+.....+++.|++.+++|.++.......+. ..+++|......+..| .+.+
T Consensus 122 i~~g~Ga~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~~~g~-------------~~~~v~l~~~~~~~~d----~~~l 184 (423)
T PLN02397 122 CLSGTGSLRLGAEFLARFYPGSTIYIPNPTWGNHHNIFRDAGV-------------PVRTYRYYDPKTRGLD----FDGL 184 (423)
T ss_pred cccchHHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHcCC-------------eEEEeecccCcCCccC----HHHH
Confidence 3344444443333333334678999999999887555444322 2222221000012222 3555
Q ss_pred HHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCC--CCccc-cc--cC-CCc
Q 011777 241 QDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGS--HYWGF-ET--QG-VIP 314 (477)
Q Consensus 241 e~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~--~~~~~-~~--~g-v~p 314 (477)
++.+... ..++.++++...+|++| .+++++.+++|.++|++||+++|+||+|.+|...+. ..... .. .+ ...
T Consensus 185 ~~~l~~~-~~~~~~i~~~~P~NPTG-~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI 262 (423)
T PLN02397 185 LEDLKAA-PDGSFVLLHACAHNPTG-VDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEIL 262 (423)
T ss_pred HHHHHhC-CCCCEEEEeCCCCCCCC-CCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCcEE
Confidence 5555422 23455666555666677 556899999999999999999999999999965330 11111 11 11 112
Q ss_pred ceeeeccccc-CccceEEEE--e-CHHHHHh----hcccccccCCCCcHHHHHHHHHHHHhhc-h-------hhHHHHHH
Q 011777 315 DIVTMAKGIG-NGLPLGAVV--T-TPEIANV----MAQKIQFNTFGGNPVCSAGGLAVLRVID-K-------ERRQAHCA 378 (477)
Q Consensus 315 Divt~sK~lg-~G~pig~v~--~-~~~~~~~----~~~~~~~~t~~~~~~~~aaa~a~l~~l~-~-------~~~~~~~~ 378 (477)
-+-+|||.++ .|||+||++ + ++++++. +........++.+.+++.++.++|+.-. . ++..+.++
T Consensus 263 ~~~SfSK~~~~~G~RvG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~ 342 (423)
T PLN02397 263 VAQSYAKNMGLYGERVGALSVVCKSADVAVRVKSQLKLIARPMYSNPPIHGASIVATILGDPELFSEWTKELKGMADRII 342 (423)
T ss_pred EEEECcccCCCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 2337999999 599999984 4 5665443 3222222334556778877777775321 0 12333445
Q ss_pred HHHHHHHHHHHHHHHhCCCceeeecc-ceeEEEEEeeCCCCCCccHHHHHHHHHHH-HHcCceeeccCCCCCEEEEeCCC
Q 011777 379 DVGSHLLGRLRTLQERHDIIGDVRGR-GLMVGMELVTDRKEKTPAKAETAVLFEKL-RELGVLVGKGGLHGNVFRIKPPM 456 (477)
Q Consensus 379 ~~~~~l~~~L~~l~~~~~~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~~~~~~iRi~p~~ 456 (477)
++.+.+.+.|+++.... .+..+.+. |+++|+.+. .++++.| .+.||.+.++ + |+++.
T Consensus 343 ~rr~~l~~~L~~~~~~~-~~~~~~p~gg~fl~~~l~-------------~~~~~~Ll~~~~V~v~~~----~--Ri~~~- 401 (423)
T PLN02397 343 SMRQKLYDALEARGSPG-DWSHITKQIGMFSFTGLN-------------KEQVDRMTKEYHIYMTRD----G--RISMA- 401 (423)
T ss_pred HHHHHHHHHHHhcCCCC-CCCcccCCceEEEecCCC-------------HHHHHHHHHhCCEEECCC----C--eEEEe-
Confidence 55555555555431000 12223344 555566541 2355555 5669998643 2 88642
Q ss_pred CCcHHHHHHHHHHHHHHHh
Q 011777 457 CFTKDDADFLVDALDYSMS 475 (477)
Q Consensus 457 ~~t~e~i~~~l~~l~~~l~ 475 (477)
..+++++++++++|.+++.
T Consensus 402 ~~~~~~i~~~~~~i~~~~~ 420 (423)
T PLN02397 402 GLSSKNVPYLADAIHAVVT 420 (423)
T ss_pred eCCHHHHHHHHHHHHHHHh
Confidence 3789999999999999874
No 238
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.85 E-value=6.1e-19 Score=177.59 Aligned_cols=321 Identities=17% Similarity=0.136 Sum_probs=197.6
Q ss_pred CCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCCC--CEEEEeCChHHHHHHHHHHHHhccCCceEEEEccC
Q 011777 113 CHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGNL--KVVYFVNSGTEANELAMLMARLSTGNLGMIALRNA 190 (477)
Q Consensus 113 ~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~--~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~ 190 (477)
..|.+.+++.+.. .+....|. ....+++++++++++... +.+++++||+++++.++.... .+++++++..++
T Consensus 16 ~~~~~~~a~~~~~---~~~~~~~~-~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~--~~~~~vlv~~~~ 89 (368)
T PRK13479 16 TSRTVREAMLRDW---GSWDDDFN-ALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLV--PRDGKVLVPDNG 89 (368)
T ss_pred CCHHHHHHhCCCC---CCCChHHH-HHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhcc--CCCCeEEEEeCC
Confidence 4677777765543 12221122 467889999999987643 468899999999999998653 255678887777
Q ss_pred ccCCcc-cccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeC
Q 011777 191 YHGGSS-GTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVEL 269 (477)
Q Consensus 191 yhG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~ 269 (477)
|++... ......+ ..+..++.+ ....++ .+++++.++. ..++..|.+..+++++|.+.+
T Consensus 90 ~~~~~~~~~~~~~g----------~~~~~i~~~--~~~~~d------~~~l~~~l~~--~~~~~~v~~~~~~~~tG~~~~ 149 (368)
T PRK13479 90 AYGARIAQIAEYLG----------IAHVVLDTG--EDEPPD------AAEVEAALAA--DPRITHVALVHCETTTGILNP 149 (368)
T ss_pred chHHHHHHHHHHcC----------CcEEEEECC--CCCCCC------HHHHHHHHHh--CCCCcEEEEEcccCccccccC
Confidence 776531 1111111 012222221 111111 4778887762 124555555566667787777
Q ss_pred CchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCccee--eecccccCccceEEEEeCHHHHHhhccccc
Q 011777 270 APGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIV--TMAKGIGNGLPLGAVVTTPEIANVMAQKIQ 347 (477)
Q Consensus 270 ~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDiv--t~sK~lg~G~pig~v~~~~~~~~~~~~~~~ 347 (477)
+++|.++|+++|+++|+|++|+ ||.. ..... ...+|++ +++|.+.++.++|++++++++++.+.....
T Consensus 150 ----~~~i~~l~~~~~~~livDa~~~-~g~~---~~~~~--~~~~d~~v~s~~K~l~g~~G~G~l~~~~~~~~~~~~~~~ 219 (368)
T PRK13479 150 ----LDEIAAVAKRHGKRLIVDAMSS-FGAI---PIDIA--ELGIDALISSANKCIEGVPGFGFVIARRSELEACKGNSR 219 (368)
T ss_pred ----HHHHHHHHHHcCCEEEEEcccc-cCCc---ccccc--ccCceEEEecCccccccCCCceEEEECHHHHHHhhcCCC
Confidence 8999999999999999998774 6532 22222 2345655 467998765568999999998877654311
Q ss_pred -----------------ccCCCCcHHHHHHHHHHHHhhchh----hHHHHHHHHHHHHHHHHHHHHHhCCCceee-eccc
Q 011777 348 -----------------FNTFGGNPVCSAGGLAVLRVIDKE----RRQAHCADVGSHLLGRLRTLQERHDIIGDV-RGRG 405 (477)
Q Consensus 348 -----------------~~t~~~~~~~~aaa~a~l~~l~~~----~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v-~g~g 405 (477)
...|+.|...+++..++++.+.++ +..+++.++.+++++.|.++ ........ ....
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~ 297 (368)
T PRK13479 220 SLSLDLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRAL--GFEPLLDAEIQSP 297 (368)
T ss_pred CeeecHHHHHhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc--CCcccCCchhcCc
Confidence 112456666777777777766433 34455566666666666554 11111110 0111
Q ss_pred eeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCC-CCEEEEeCCCCCcHHHHHHHHHHHHHHHhhC
Q 011777 406 LMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLH-GNVFRIKPPMCFTKDDADFLVDALDYSMSKL 477 (477)
Q Consensus 406 ~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~-~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~l 477 (477)
....+.+... + .....++.+.|.++||.+.++... .+++|++....++++|++++++.|+++++++
T Consensus 298 ~~~~~~~~~~-----~-~~~~~~l~~~L~~~gi~v~~g~~~~~~~iRis~~~~~t~edi~~~l~~L~~~l~~~ 364 (368)
T PRK13479 298 IIVTFHAPAD-----P-AYDFKEFYERLKEQGFVIYPGKLTQVDTFRIGCIGDVDAADIRRLVAAIAEALYWM 364 (368)
T ss_pred eEEEEECCCC-----C-CcCHHHHHHHHHHCCEEEecCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHHHc
Confidence 2222322111 0 012357888999999999876432 3689998766779999999999999988753
No 239
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.85 E-value=2.3e-18 Score=173.71 Aligned_cols=317 Identities=16% Similarity=0.123 Sum_probs=196.0
Q ss_pred CCHHHHHHHHHHHhhccccccccC--ChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhc----cCCceEEE
Q 011777 113 CHPDVLNAIFEQSKLLQHATTIYL--HHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLS----TGNLGMIA 186 (477)
Q Consensus 113 ~~p~v~~Av~~~l~~~~~~~~~~~--~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~----~~~~~ii~ 186 (477)
++|.+.+++.+.+.........+. .+...++.++|+++++.+.+.+++++||++++..++..++.. .+++.|++
T Consensus 32 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~ 111 (373)
T TIGR03812 32 PHPIAVKAYDMFIETNLGDPGLFPGTKKIEEEVVGSLGNLLHLPDAYGYIVSGGTEANIQAVRAAKNLAREEKRTPNIIV 111 (373)
T ss_pred chHHHHHHHHHHhhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCCeEEeccHHHHHHHHHHHHHHHHhccCCCcEEEE
Confidence 578888888776554211112222 244578999999999876567889999999999998766532 23357888
Q ss_pred EccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCe
Q 011777 187 LRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGA 266 (477)
Q Consensus 187 ~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~ 266 (477)
.+++|+.+...+. .. |.....++....... | .+++++.++ ++.++.+++.| ++++|.
T Consensus 112 ~~~~h~~~~~~~~-~~------------G~~~~~v~~~~~~~~--d----~~~l~~~l~---~~~~~vv~~~~-~~~tG~ 168 (373)
T TIGR03812 112 PESAHFSFEKAAE-ML------------GLELRYAPLDEDYTV--D----VKDVEDLID---DNTIGIVGIAG-TTELGQ 168 (373)
T ss_pred CCcchHHHHHHHH-Hc------------CCeEEEEeeCCCCCc--C----HHHHHHHHh---hCcEEEEEECC-CCCCCc
Confidence 7777765432211 11 222222221111111 1 477877775 23345666666 456787
Q ss_pred eeCCchhHHHHHHHHHHhCcEEEEcCcccCccC--C--CCCCccccccCCCcceeeec--ccccCccceEEEE-eCHHHH
Q 011777 267 VELAPGYLKLVYDIVRKAGGVCIADEVQTGFGR--T--GSHYWGFETQGVIPDIVTMA--KGIGNGLPLGAVV-TTPEIA 339 (477)
Q Consensus 267 ~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr--~--G~~~~~~~~~gv~pDivt~s--K~lg~G~pig~v~-~~~~~~ 339 (477)
+.+ +++|.++|+++|+++|+|++|.++-. . |.....++..-...|.++++ |...++.|.|+++ .++++.
T Consensus 169 ~~~----~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~~~~~~G~~~~~~~~~~ 244 (373)
T TIGR03812 169 IDD----IEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGLSPIPAGGILFRSKSYL 244 (373)
T ss_pred cCC----HHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEEEECccccCCCcCCceEEEEeCHHHH
Confidence 766 99999999999999999999975421 0 00000111111134555543 7333567887665 577777
Q ss_pred Hhhccccc--ccC------CCCcHHHHHHHHHHHHhhchh---hHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeE
Q 011777 340 NVMAQKIQ--FNT------FGGNPVCSAGGLAVLRVIDKE---RRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMV 408 (477)
Q Consensus 340 ~~~~~~~~--~~t------~~~~~~~~aaa~a~l~~l~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~ 408 (477)
+.+..... ... .+.++..++++.++|+.+.++ +..++..++.++++++|+++ +......+...++
T Consensus 245 ~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~v 320 (373)
T TIGR03812 245 KYLSVDAPYLTVKKQATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENTRYLVEELKKI----GFEPVIEPVLNIV 320 (373)
T ss_pred hhhcccCcccCCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC----CCeEEcCCCceEE
Confidence 76642111 010 123456777888888877553 45677778888888877764 2211122333444
Q ss_pred EEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHH
Q 011777 409 GMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADFLVDALDY 472 (477)
Q Consensus 409 ~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~ 472 (477)
.+.+ +. ...+.+.|.++||++.... ..+++|++++..+|++|++++++.|++
T Consensus 321 ~~~~--------~~---~~~v~~~L~~~gi~v~~~~-~~~~iRis~~~~~t~edid~l~~~L~~ 372 (373)
T TIGR03812 321 AFEV--------DD---PEEVRKKLRDRGWYVSVTR-CPKALRIVVMPHVTREHIEEFLEDLKE 372 (373)
T ss_pred EEEe--------CC---HHHHHHHHHHCCceeccCC-CCCEEEEEEECCCCHHHHHHHHHHHhh
Confidence 4443 11 2468889999999997652 357899999999999999999999975
No 240
>PLN02651 cysteine desulfurase
Probab=99.85 E-value=1.7e-19 Score=181.20 Aligned_cols=319 Identities=17% Similarity=0.149 Sum_probs=194.0
Q ss_pred EEeecCCcccccCCCCCHHHHHHHHHHHhhcc-cccc------ccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHH
Q 011777 98 YLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQ-HATT------IYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANEL 170 (477)
Q Consensus 98 ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~-~~~~------~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~ 170 (477)
|||..+.. ..+++|.+++.+.+.... .... ....+...+++++|+++++.+.+.|+|++|+|+|+..
T Consensus 2 Yld~a~~~------~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~t~~~t~a~~~ 75 (364)
T PLN02651 2 YLDMQATT------PIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGADPKEIIFTSGATESNNL 75 (364)
T ss_pred cccCcCCC------CCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHH
Confidence 67765433 368999999988875421 1110 1113446788899999998777789999999999999
Q ss_pred HHHHHHhc--cCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccC
Q 011777 171 AMLMARLS--TGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGT 248 (477)
Q Consensus 171 Al~~ar~~--~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~ 248 (477)
+++.+... .++++|++....|+........... .|+....++.......+ .++++++++
T Consensus 76 ~l~~~~~~~~~~g~~vl~~~~~h~s~~~~~~~~~~----------~g~~v~~v~~~~~~~~d------~~~l~~~i~--- 136 (364)
T PLN02651 76 AIKGVMHFYKDKKKHVITTQTEHKCVLDSCRHLQQ----------EGFEVTYLPVKSDGLVD------LDELAAAIR--- 136 (364)
T ss_pred HHHHHHHhccCCCCEEEEcccccHHHHHHHHHHHh----------cCCEEEEEccCCCCcCC------HHHHHHhcC---
Confidence 99876432 3456777766555543222111110 12222111111111111 477888775
Q ss_pred CCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCcceeeec--ccccCc
Q 011777 249 SGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMA--KGIGNG 326 (477)
Q Consensus 249 ~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~s--K~lg~G 326 (477)
+++++|++..+++++|.+.+ +++|.++|++||+++++|.+|+ +|. ..++.....+|++++| | +++.
T Consensus 137 -~~t~lv~v~~~~n~tG~~~~----l~~I~~~~~~~g~~~~vD~a~~-~g~-----~~~~~~~~~~D~~~~s~hK-~~gp 204 (364)
T PLN02651 137 -PDTALVSVMAVNNEIGVIQP----VEEIGELCREKKVLFHTDAAQA-VGK-----IPVDVDDLGVDLMSISGHK-IYGP 204 (364)
T ss_pred -CCcEEEEEECCCCCceeccc----HHHHHHHHHHcCCEEEEEcchh-hCC-----cccCcccCCCCEEEechhh-hCCC
Confidence 45788888888888998887 9999999999999999999997 332 1233334456888775 8 5544
Q ss_pred cceEEEEeCHHHHHhhcccccc-------cCCCCcHHHHHHHHHHHHhhch--hhHHHHHHHHHHHHHHHHHHHHHhCCC
Q 011777 327 LPLGAVVTTPEIANVMAQKIQF-------NTFGGNPVCSAGGLAVLRVIDK--ERRQAHCADVGSHLLGRLRTLQERHDI 397 (477)
Q Consensus 327 ~pig~v~~~~~~~~~~~~~~~~-------~t~~~~~~~~aaa~a~l~~l~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~ 397 (477)
..+|+++++++..+.+.....+ -..+.|..++.+..++|+.+.+ ++..++.+++.++++++|.+......+
T Consensus 205 ~G~g~l~v~~~~~~~l~p~~~g~~~~~~~~~GT~~~~~~~~l~~al~~~~~~~~~i~~~~~~l~~~l~~~l~~~~~~~~i 284 (364)
T PLN02651 205 KGVGALYVRRRPRVRLEPLMSGGGQERGRRSGTENTPLVVGLGAACELAMKEMDYDEKHMKALRERLLNGLRAKLGGVRV 284 (364)
T ss_pred CceEEEEEcCCCCCCCCccccCCCccCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEE
Confidence 6799999998766555432211 1223456667777788887754 334455566666666665442111111
Q ss_pred cee--e-eccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccC-----------------C----CCCEEEEe
Q 011777 398 IGD--V-RGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGG-----------------L----HGNVFRIK 453 (477)
Q Consensus 398 ~~~--v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~-----------------~----~~~~iRi~ 453 (477)
... . +....++.+.+.. ....++.+.|.+ |.+..+. . ..+.+|++
T Consensus 285 ~~~~~~~~~~~~i~~~~~~~---------~~~~~~~~~L~~--i~v~~g~~c~~~~~~~~~~~~~~g~~~~~~~~~vR~S 353 (364)
T PLN02651 285 NGPRDPEKRYPGTLNLSFAY---------VEGESLLMGLKE--VAVSSGSACTSASLEPSYVLRALGVPEEMAHGSLRLG 353 (364)
T ss_pred ECCCCcccCcCCEEEEEeCC---------CCHHHHHHHhCC--EEEEchhhcCCCCCCcCHHHHHcCCChHHhCceEEEE
Confidence 111 0 1112344554421 113466767654 6665442 0 13689999
Q ss_pred CCCCCcHHHHH
Q 011777 454 PPMCFTKDDAD 464 (477)
Q Consensus 454 p~~~~t~e~i~ 464 (477)
++..+|++|||
T Consensus 354 ~~~~~t~~did 364 (364)
T PLN02651 354 VGRFTTEEEVD 364 (364)
T ss_pred cCCCCCHHHcC
Confidence 99999999985
No 241
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.84 E-value=2e-18 Score=177.11 Aligned_cols=340 Identities=16% Similarity=0.130 Sum_probs=201.5
Q ss_pred CCEEEeecCCcccccCCCCCHHHHHHHHHHHhhcccccccc-CChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHH
Q 011777 95 GRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIY-LHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAML 173 (477)
Q Consensus 95 G~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~-~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~ 173 (477)
|.-++||..-.++ ..+.+++.+++..... .| ......+|++.+++++.. +.+++|+||++|+..+++
T Consensus 44 g~p~~D~~tds~t-------~a~~~a~~~a~~~g~~---~Y~~~~g~~~Lreaia~~~~~--~~vv~t~ggt~A~~~~~~ 111 (460)
T PRK13238 44 EDVFIDLLTDSGT-------GAMSDRQWAAMMRGDE---AYAGSRSYYRLEDAVKDIFGY--PYTIPTHQGRAAEQILFP 111 (460)
T ss_pred CCCCCCCCCCCCc-------hhhhHHHHHHHHhCCc---ccCCCCCHHHHHHHHHHHhCC--CcEEECCCHHHHHHHHHH
Confidence 4445676643321 1477777777654322 22 345578899999999854 679999999999999987
Q ss_pred HHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCC--------CCcCCCCCCCHHHHHHHHHHHHh
Q 011777 174 MARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNP--------DPYHGSFGSDAARYAQDLQDHID 245 (477)
Q Consensus 174 ~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~le~~i~ 245 (477)
... .+++ ||..++.|..+.......++.. ..++.. +++.+.++ .++|++.++
T Consensus 112 all--~pGD-Vii~~p~~~~~~~~i~~~G~~~-----------v~v~~~~~~~~~~~~~f~g~id------~e~Le~~i~ 171 (460)
T PRK13238 112 VLI--KKGD-VVPSNYHFDTTRAHIELNGATA-----------VDLVIDEALDTGSRHPFKGNFD------LEKLEALIE 171 (460)
T ss_pred HhC--CCCC-EEccCCcccchHHHHHHcCCEE-----------EEEeccccccccccccccCCcC------HHHHHHHHh
Confidence 552 2445 7777776665433222222111 111111 11111122 588888887
Q ss_pred ccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccC----ccC---CCCCCcccccc------CC
Q 011777 246 FGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTG----FGR---TGSHYWGFETQ------GV 312 (477)
Q Consensus 246 ~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g----fgr---~G~~~~~~~~~------gv 312 (477)
...++++++|+++..+|++|..+.+.+.+++|.++|++||++||+|+++.. |.. .| ....... +-
T Consensus 172 ~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g--~~~~si~~i~~~~~s 249 (460)
T PRK13238 172 EVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPG--YKDKSIKEIAREMFS 249 (460)
T ss_pred hcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhcccc--ccCCCHHHHhhhhcc
Confidence 433357888888877777665677899999999999999999999997742 110 01 0000100 11
Q ss_pred Ccceeeec--ccccCccce-EEEEeC-HHHHHhhcccc---c-ccCCCCcHHH-HHHHHHHHHhhchhhHHHHHHHHHHH
Q 011777 313 IPDIVTMA--KGIGNGLPL-GAVVTT-PEIANVMAQKI---Q-FNTFGGNPVC-SAGGLAVLRVIDKERRQAHCADVGSH 383 (477)
Q Consensus 313 ~pDivt~s--K~lg~G~pi-g~v~~~-~~~~~~~~~~~---~-~~t~~~~~~~-~aaa~a~l~~l~~~~~~~~~~~~~~~ 383 (477)
..|+++|| |.+.+ |. |+++++ +++.+.++... + ..|+++++.. +.|...+|+...+++..+...+..++
T Consensus 250 ~~D~~~~Sg~K~g~~--~~GG~i~~~d~~l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l~e~~~~~~~~~~~~~~~~ 327 (460)
T PRK13238 250 YADGLTMSAKKDAMV--NIGGLLCFRDEDLFTECRTLCILYEGFPTYGGLAGRDMEALAVGLYEGMDEDYLAYRIGQVEY 327 (460)
T ss_pred cCcEEEEecccCCCC--cceeEEEcChHHHHHHhhhcccccCCcccccCcHHHHHHHHHhhHHHhhChHHHHHHHHHHHH
Confidence 25666665 32222 32 566666 57887776542 2 3488887666 44444456544345555555556678
Q ss_pred HHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCc-cHHHHHHH-HHHHHHcCceeeccCC---------------C
Q 011777 384 LLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTP-AKAETAVL-FEKLRELGVLVGKGGL---------------H 446 (477)
Q Consensus 384 l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~-~~~~~~~~-~~~l~~~Gv~v~~~~~---------------~ 446 (477)
|.+.|++. .++++ .+..|.++.+++..- ....+ ......++ .+.+.+.||.+.+++. .
T Consensus 328 l~~~L~~~--G~~~~--~p~Gg~~v~~d~~~~-~~~~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~ 402 (460)
T PRK13238 328 LGEGLEEA--GVPIQ--TPAGGHAVFVDAGKF-LPHIPAEQFPAQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAP 402 (460)
T ss_pred HHHHHHHC--CCCeE--ccCCceEEEEEchhc-CCCCCCCCCchHHHHHHHHHHcCeeeecccceecccCCCCccccCCc
Confidence 88877763 23332 233456666666321 11111 00012334 4555677999887641 0
Q ss_pred CCEEEEeCCC-CCcHHHHHHHHHHHHHHHh
Q 011777 447 GNVFRIKPPM-CFTKDDADFLVDALDYSMS 475 (477)
Q Consensus 447 ~~~iRi~p~~-~~t~e~i~~~l~~l~~~l~ 475 (477)
.+.+||..|- ..|.++++.+.++|.++.+
T Consensus 403 ~~~~Rla~~rr~~~~~~~~~~~~~l~~~~~ 432 (460)
T PRK13238 403 AELLRLAIPRRVYTQSHMDYVAEALKAVKE 432 (460)
T ss_pred cceEEEecccccCCHHHHHHHHHHHHHHHH
Confidence 2689998774 3489999999999988764
No 242
>PLN02368 alanine transaminase
Probab=99.84 E-value=2.9e-19 Score=180.89 Aligned_cols=249 Identities=12% Similarity=0.045 Sum_probs=158.3
Q ss_pred ChHHHHHHHHHHhhCC--CCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCC
Q 011777 137 HHAIADFAEALASKMP--GNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQG 214 (477)
Q Consensus 137 ~~~~~~l~~~La~~~~--~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~ 214 (477)
.+.++.+++++.+..+ .+.++|++|+|+++++..+++.... .+++.|++.+++|..+.......+.
T Consensus 110 ~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~-~pGd~Vli~~P~Y~~y~~~~~~~g~----------- 177 (407)
T PLN02368 110 PGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIR-GEKDGVLVPVPQYPLYSATISLLGG----------- 177 (407)
T ss_pred HHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcC-CCCCEEEEeCCCCccHHHHHHHcCC-----------
Confidence 3556666666665433 4567899999999999998886531 3568899999999988655433322
Q ss_pred CeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccC--CCCee-EEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEc
Q 011777 215 EIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGT--SGKVA-GFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIAD 291 (477)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~--~~~~a-~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~D 291 (477)
..++++......|.-| .+++++.++... ..+++ .++++| +|++| .+.+++.+++|.++|++||++||+|
T Consensus 178 --~~v~v~~~~~~~~~~d----~~~le~~i~~~~~~~~~~k~l~l~nP-~NPTG-~v~s~e~l~~l~~~a~~~~~~II~D 249 (407)
T PLN02368 178 --TLVPYYLEESENWGLD----VNNLRQSVAQARSKGITVRAMVIINP-GNPTG-QCLSEANLREILKFCYQERLVLLGD 249 (407)
T ss_pred --EEEEEecccccCCCCC----HHHHHHHHHHHhhcCCCeEEEEEECC-CCCCC-ccCCHHHHHHHHHHHHHcCCEEEEE
Confidence 2222222111112222 477877775211 11455 566667 55666 5668999999999999999999999
Q ss_pred CcccCccCCCC-CCccc-ccc-CC------Cccee---eecccc-c-CccceEEEE---eCHHHHHhhcccccccCCCCc
Q 011777 292 EVQTGFGRTGS-HYWGF-ETQ-GV------IPDIV---TMAKGI-G-NGLPLGAVV---TTPEIANVMAQKIQFNTFGGN 354 (477)
Q Consensus 292 Ev~~gfgr~G~-~~~~~-~~~-gv------~pDiv---t~sK~l-g-~G~pig~v~---~~~~~~~~~~~~~~~~t~~~~ 354 (477)
|+|..|.+.+. .+.++ +.. +. .+.++ +|||++ + .|||+||++ +++++++.+.... ..+++.|
T Consensus 250 E~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~~~~~~-~~~~~~~ 328 (407)
T PLN02368 250 EVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEEIYKVA-SIALSPN 328 (407)
T ss_pred ccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHHHHHHh-cccCCCC
Confidence 99998866552 12121 110 11 12333 689999 5 699999999 4888888877643 3467788
Q ss_pred HHHHHHHHHHHHhhc--h----------hhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEE
Q 011777 355 PVCSAGGLAVLRVID--K----------ERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGM 410 (477)
Q Consensus 355 ~~~~aaa~a~l~~l~--~----------~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i 410 (477)
.+++.++.++|+.-+ + +++.+.++++.+.+.+.|++ .+.+....+.|.|+.+
T Consensus 329 ~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~----~~g~~~~~P~Gafy~~ 392 (407)
T PLN02368 329 VSGQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNS----CKNVVCNFTEGAMYSF 392 (407)
T ss_pred cHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhC----CCCeEeCCCCeeeEec
Confidence 899999999886321 0 12334444444445454444 3445556667766643
No 243
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.83 E-value=5.1e-18 Score=171.38 Aligned_cols=319 Identities=17% Similarity=0.141 Sum_probs=195.4
Q ss_pred CCHHHHHHHHHHHhhcc-cc-ccccC-----ChHHHHHHHHHHhhCCCCC-CEEEEeCChHHHHHHHHHHHHhccCCceE
Q 011777 113 CHPDVLNAIFEQSKLLQ-HA-TTIYL-----HHAIADFAEALASKMPGNL-KVVYFVNSGTEANELAMLMARLSTGNLGM 184 (477)
Q Consensus 113 ~~p~v~~Av~~~l~~~~-~~-~~~~~-----~~~~~~l~~~La~~~~~~~-~~v~~~~sGseA~~~Al~~ar~~~~~~~i 184 (477)
.++.+.+++.+.++... .. ...|. .+...++++.++++++... ++|+|++|+++++..++... ..+++.|
T Consensus 12 ~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~--~~~gd~v 89 (376)
T TIGR01977 12 KPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNAPSSAHVVFTNNATTALNIALKGL--LKEGDHV 89 (376)
T ss_pred CCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHhc--cCCCCEE
Confidence 46799999988887632 11 11121 2456788999999987543 48999999999999988752 2356778
Q ss_pred EEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCC
Q 011777 185 IALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVG 264 (477)
Q Consensus 185 i~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~ 264 (477)
++....|++........... .|...+.++.......+ .+++++.++ +++++|++..+++++
T Consensus 90 l~~~~~~~~~~~~~~~~~~~---------~g~~~~~v~~~~~~~~d------~~~l~~~~~----~~~~~v~~~~~~n~t 150 (376)
T TIGR01977 90 ITTPMEHNSVARPLECLKEQ---------IGVEITIVKCDNEGLIS------PERIKRAIK----TNTKLIVVSHASNVT 150 (376)
T ss_pred EECcchhhHHHHHHHHHHHH---------cCcEEEEEecCCCCCcC------HHHHHHhcC----CCCeEEEEECCCCCc
Confidence 87666654432211111000 01222222111111111 477777775 356778887878888
Q ss_pred CeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCcceeee--cccccCccceEEEEeCHHH-HHh
Q 011777 265 GAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTM--AKGIGNGLPLGAVVTTPEI-ANV 341 (477)
Q Consensus 265 G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~--sK~lg~G~pig~v~~~~~~-~~~ 341 (477)
|.+.+ +++|.++|+++|+++|+|++++ +|.. .+..+ ...+|++++ .|.+++.-..|+++.+++. +..
T Consensus 151 G~~~~----~~~i~~l~~~~~~~livD~a~~-~g~~---~~~~~--~~~~D~~~~s~~K~l~~p~g~g~l~~~~~~~~~~ 220 (376)
T TIGR01977 151 GTILP----IEEIGELAQENGIFFILDAAQT-AGVI---PIDMT--ELAIDMLAFTGHKGLLGPQGTGGLYIREGIKLKP 220 (376)
T ss_pred cccCC----HHHHHHHHHHcCCEEEEEhhhc-cCcc---CCCch--hcCCCEEEecccccccCCCCceEEEEcCCcCcCc
Confidence 87777 8999999999999999999996 4432 22222 234677655 4999865557777776653 111
Q ss_pred hcccc---c-------------ccCCCCcHHHHHHHHHHHHhhchh---hHHHHHHHHHHHHHHHHHHHHHhCCCce--e
Q 011777 342 MAQKI---Q-------------FNTFGGNPVCSAGGLAVLRVIDKE---RRQAHCADVGSHLLGRLRTLQERHDIIG--D 400 (477)
Q Consensus 342 ~~~~~---~-------------~~t~~~~~~~~aaa~a~l~~l~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~--~ 400 (477)
+.... . ....+.+....++..++++.+.+. ...++.+++.++++++|.++.. ..+.. +
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~-~~~~~~~~ 299 (376)
T TIGR01977 221 LKSGGTGSHSALIDQPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINK-VKIYGPAD 299 (376)
T ss_pred eecCCCccccccccccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCC-eEEeCCCC
Confidence 11100 0 001123456666666788777553 4566777777777777765310 11111 1
Q ss_pred eeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHc-CceeeccC------------CCCCEEEEeCCCCCcHHHHHHHH
Q 011777 401 VRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLREL-GVLVGKGG------------LHGNVFRIKPPMCFTKDDADFLV 467 (477)
Q Consensus 401 v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~------------~~~~~iRi~p~~~~t~e~i~~~l 467 (477)
....+.++.+.+.. ....++.+.|.++ ||.+..+. ...+.||+++...+|++|++.++
T Consensus 300 ~~~~~~~v~~~~~~---------~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~t~~dv~~~~ 370 (376)
T TIGR01977 300 PANRVGVVSFTVEG---------IDSEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIEKLL 370 (376)
T ss_pred ccccCCeEEEEECC---------CCHHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCeEEEecCCCCCHHHHHHHH
Confidence 11134555665521 1245688888887 99887642 13468999999999999999999
Q ss_pred HHHHH
Q 011777 468 DALDY 472 (477)
Q Consensus 468 ~~l~~ 472 (477)
++|++
T Consensus 371 ~~l~~ 375 (376)
T TIGR01977 371 EALSE 375 (376)
T ss_pred HHHhh
Confidence 99975
No 244
>PRK14012 cysteine desulfurase; Provisional
Probab=99.82 E-value=4.4e-18 Score=173.42 Aligned_cols=327 Identities=14% Similarity=0.144 Sum_probs=191.7
Q ss_pred CEEEeecCCcccccCCCCCHHHHHHHHHHHh--h-cccccc-----c-cCChHHHHHHHHHHhhCCCCCCEEEEeCChHH
Q 011777 96 RRYLDAFAGIVTVSCGHCHPDVLNAIFEQSK--L-LQHATT-----I-YLHHAIADFAEALASKMPGNLKVVYFVNSGTE 166 (477)
Q Consensus 96 ~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~--~-~~~~~~-----~-~~~~~~~~l~~~La~~~~~~~~~v~~~~sGse 166 (477)
+.|+|..+.. ..++.+.+++.+.+. . ...... . ...+...+++++++++++.+.+.++|++|||+
T Consensus 4 ~iyld~a~~~------~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~~~~v~~~~g~t~ 77 (404)
T PRK14012 4 PIYLDYSATT------PVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIGADPREIVFTSGATE 77 (404)
T ss_pred eEEecCcCCC------CCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcCcCeEEEeCCHHH
Confidence 4688876543 468999999988775 2 111110 0 01244678889999999877778999999999
Q ss_pred HHHHHHHHHHh--ccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHH
Q 011777 167 ANELAMLMARL--STGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHI 244 (477)
Q Consensus 167 A~~~Al~~ar~--~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i 244 (477)
|+..+++.+.. ..+++.||+....|+........... .|...+.++.......+ .+++++++
T Consensus 78 al~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~----------~g~~~~~v~~~~~g~~d------~~~l~~~i 141 (404)
T PRK14012 78 SDNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQLER----------EGFEVTYLDPQSNGIID------LEKLEAAM 141 (404)
T ss_pred HHHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHHHHHh----------CCCEEEEEccCCCCcCC------HHHHHHhc
Confidence 99999886542 23456677766666543222211100 02221111111111111 57888887
Q ss_pred hccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCcceeeec--cc
Q 011777 245 DFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMA--KG 322 (477)
Q Consensus 245 ~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~s--K~ 322 (477)
+ .++++|++..+++++|.+.+ +++|.++|+++|+++|+|++|+ +|.. . ++.....+|++++| |.
T Consensus 142 ~----~~t~lv~~~~~~n~tG~~~~----~~~I~~la~~~g~~vivD~a~~-~g~~---~--~~~~~~~~D~~~~s~~K~ 207 (404)
T PRK14012 142 R----DDTILVSIMHVNNEIGVIQD----IAAIGEICRERGIIFHVDAAQS-VGKV---P--IDLSKLKVDLMSFSAHKI 207 (404)
T ss_pred C----CCCEEEEEECcCCCccchhh----HHHHHHHHHHcCCEEEEEcchh-cCCc---c--cCcccCCCCEEEEehhhc
Confidence 6 35678888888888998777 8999999999999999999997 4322 1 22223457888777 96
Q ss_pred ccCccceEEEEeCHHHHHhhcccccccC------C-CCcHHHHHHHHHHHHhhch--hhHHHHHHHHHHHHHHHHHHHHH
Q 011777 323 IGNGLPLGAVVTTPEIANVMAQKIQFNT------F-GGNPVCSAGGLAVLRVIDK--ERRQAHCADVGSHLLGRLRTLQE 393 (477)
Q Consensus 323 lg~G~pig~v~~~~~~~~~~~~~~~~~t------~-~~~~~~~aaa~a~l~~l~~--~~~~~~~~~~~~~l~~~L~~l~~ 393 (477)
+|. .++|+++++++....+.....++. . +.+.....+..++++.++. ++..++.+++.+++.+.|++
T Consensus 208 ~gp-~g~G~l~~~~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~--- 283 (404)
T PRK14012 208 YGP-KGIGALYVRRKPRVRLEAQMHGGGHERGMRSGTLPTHQIVGMGEAARIAKEEMATENERIRALRDRLWNGIKD--- 283 (404)
T ss_pred cCC-CceEEEEEecCCCCCCCceecCCCccCCccCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhc---
Confidence 653 368998888764333322111111 1 1233333333355554432 23445555556666665544
Q ss_pred hCCCceee-----eccce-eEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccC---------------------CC
Q 011777 394 RHDIIGDV-----RGRGL-MVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGG---------------------LH 446 (477)
Q Consensus 394 ~~~~~~~v-----~g~g~-~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~---------------------~~ 446 (477)
.+.+... +..+. .+++.+. . ...+...|. ++.+..+. ..
T Consensus 284 -~~~i~~~~~~~~~~~~~~~~~~~~~--------~---~~~~~~~l~--~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~ 349 (404)
T PRK14012 284 -IEEVYLNGDLEQRVPGNLNVSFNYV--------E---GESLIMALK--DLAVSSGSACTSASLEPSYVLRALGLNDELA 349 (404)
T ss_pred -CCCEEEeCCccccCCCEEEEEEeCc--------C---HHHHHHhCC--CeEEEchhhhCCCCCCCCHHHHHcCCChhhc
Confidence 2322110 11111 2222221 0 123444443 43333220 11
Q ss_pred CCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 447 GNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 447 ~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
.+.+|++++...|++|+|++++.|+++++.
T Consensus 350 ~~~iRls~~~~~t~~dvd~~~~~l~~~~~~ 379 (404)
T PRK14012 350 HSSIRFSLGRFTTEEEIDYAIELVRKSIGK 379 (404)
T ss_pred CceEEEEecCCCCHHHHHHHHHHHHHHHHH
Confidence 368999999999999999999999988753
No 245
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.82 E-value=7e-18 Score=171.94 Aligned_cols=333 Identities=16% Similarity=0.116 Sum_probs=189.8
Q ss_pred CEEEeecCCcccccCCCCCHHHHHHHHHHHh-hcc--ccccc-c-CChH---HHH-HHHHHHhhCCCCCCEEEEeCChHH
Q 011777 96 RRYLDAFAGIVTVSCGHCHPDVLNAIFEQSK-LLQ--HATTI-Y-LHHA---IAD-FAEALASKMPGNLKVVYFVNSGTE 166 (477)
Q Consensus 96 ~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~-~~~--~~~~~-~-~~~~---~~~-l~~~La~~~~~~~~~v~~~~sGse 166 (477)
+++|.+..+.. ..+|+|++++.+.+. +.. +.... + ..+. .++ .++.++++++.+...+ +.+||++
T Consensus 19 ~~~~~~~~~~~-----~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~v-~~~sgt~ 92 (402)
T cd00378 19 RETLELIASEN-----FTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAEYANV-QPHSGSQ 92 (402)
T ss_pred HhCeeeeccCC-----cCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCCceee-ecCCcHH
Confidence 45777766553 248999999987652 221 11111 1 1222 233 3445667776654444 4457899
Q ss_pred HHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCe--eeecCCCCc-CCCCCCCHHHHHHHHHHH
Q 011777 167 ANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEI--HHVVNPDPY-HGSFGSDAARYAQDLQDH 243 (477)
Q Consensus 167 A~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~le~~ 243 (477)
|+..+++... .++++|++.++.|.+......... ....|. ..++.+... ...++ .+++++.
T Consensus 93 a~~~~l~~l~--~~Gd~Vl~~~~~~~~~~~~~~~~~--------~~~~g~~~~~~~~~~~~~~~~id------~~~l~~~ 156 (402)
T cd00378 93 ANLAVYFALL--EPGDTIMGLDLSHGGHLTHGSFTK--------VSASGKLFESVPYGVDPETGLID------YDALEKM 156 (402)
T ss_pred HHHHHHHHhc--CCCCEEEEecCccCcccccccccc--------ccccceeEEEecCCcCcccCCcC------HHHHHHH
Confidence 9999988663 356789998888866533211000 000121 112111100 11111 5778887
Q ss_pred HhccCCCCeeEEEe-cccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcc-cCccCCCCCCccccccCCCccee--ee
Q 011777 244 IDFGTSGKVAGFIA-ETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQ-TGFGRTGSHYWGFETQGVIPDIV--TM 319 (477)
Q Consensus 244 i~~~~~~~~a~vi~-epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~-~gfgr~G~~~~~~~~~gv~pDiv--t~ 319 (477)
+.. .+++++++ .|.+ |...+ +++|.++|++||+++|+||+| .|+...|.....+. ..|++ ++
T Consensus 157 i~~---~~~~~v~~~~~~~---~~~~~----~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~----~~dv~~~s~ 222 (402)
T cd00378 157 ALE---FKPKLIVAGASAY---PRPID----FKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP----GADVVTTTT 222 (402)
T ss_pred HHh---CCCCEEEecCccc---CCCcC----HHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc----CCcEEEecc
Confidence 752 23445554 5543 22333 899999999999999999996 44433331111112 24654 67
Q ss_pred cccccCccceEEEEeCH-HHHHhhcccccccCCCCc-HHHHHHHHHHHHhhch---hhHHHHHHHHHHHHHHHHHHHHHh
Q 011777 320 AKGIGNGLPLGAVVTTP-EIANVMAQKIQFNTFGGN-PVCSAGGLAVLRVIDK---ERRQAHCADVGSHLLGRLRTLQER 394 (477)
Q Consensus 320 sK~lg~G~pig~v~~~~-~~~~~~~~~~~~~t~~~~-~~~~aaa~a~l~~l~~---~~~~~~~~~~~~~l~~~L~~l~~~ 394 (477)
+|++ +|++.|++++++ ++++.+......+.++.+ +..++++..++..+.. ++..+++.++.+++++.|.++ .
T Consensus 223 sK~l-~G~~gg~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g 299 (402)
T cd00378 223 HKTL-RGPRGGLILTRKGELAKKINSAVFPGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKER--G 299 (402)
T ss_pred ccCC-CCCCceEEEeccHHHHHHHHHHhCccccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhC--C
Confidence 8999 678899999987 888877554333333332 2333333334433322 345666777777777777653 1
Q ss_pred CCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeecc----C----CCCCEEEEeCCCC----CcHHH
Q 011777 395 HDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKG----G----LHGNVFRIKPPMC----FTKDD 462 (477)
Q Consensus 395 ~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~----~----~~~~~iRi~p~~~----~t~e~ 462 (477)
+.... ....+.++++.+.... .....+.+.|.++||.+.+. . ...+.+|++++.. ++++|
T Consensus 300 ~~~~~-~~~~~~~v~v~~~~~~-------~~~~~~~~~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~d 371 (402)
T cd00378 300 FKVVS-GGTDNHLVLVDLRPKG-------ITGKAAEDALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEE 371 (402)
T ss_pred CeEee-cCCCCeEEEEeCCccC-------CCHHHHHHHHHHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHH
Confidence 21111 1124667777763211 01235667788899999642 1 1236799987664 47999
Q ss_pred HHHHHHHHHHHHh
Q 011777 463 ADFLVDALDYSMS 475 (477)
Q Consensus 463 i~~~l~~l~~~l~ 475 (477)
++++++.|.+++.
T Consensus 372 i~~~~~~l~~~~~ 384 (402)
T cd00378 372 MEEIADFIARALK 384 (402)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999999875
No 246
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.82 E-value=2.1e-17 Score=157.62 Aligned_cols=318 Identities=16% Similarity=0.183 Sum_probs=196.8
Q ss_pred CCCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCc
Q 011777 112 HCHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAY 191 (477)
Q Consensus 112 h~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~y 191 (477)
|+.|...+|+.+.+...... ...-+++++.+++++|.||++.+.... .+++..++..|-|
T Consensus 121 ~Gl~~frqa~A~Fm~~~r~~------------------~v~fdP~~~Vv~~G~T~ane~l~fcLa--dpgdafLvPtPyY 180 (471)
T KOG0256|consen 121 HGLPSFRQAVAEFMERARGN------------------RVKFDPERVVVTNGATSANETLMFCLA--DPGDAFLVPTPYY 180 (471)
T ss_pred cCchHHHHHHHHHHHHHhCC------------------CCccCccceEEecccchhhHHHHHHhc--CCCceeeecCCCC
Confidence 56677777777766552110 011245789999999999998766443 3778899999999
Q ss_pred cCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhcc--CCCCeeEEEecccCCCCCeeeC
Q 011777 192 HGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFG--TSGKVAGFIAETIQGVGGAVEL 269 (477)
Q Consensus 192 hG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~--~~~~~a~vi~epi~~~~G~~~~ 269 (477)
.|...... |+ .|+..+|+...-...|.-+. +.+|.++++. ...+++++|+...+|+-|. ..
T Consensus 181 ~gfdrdl~-------~r-----Tgveivpv~c~Ss~~f~itv----~alE~A~~~A~~~~~kVkGvlitNPsNPLG~-~~ 243 (471)
T KOG0256|consen 181 PGFDRDLR-------WR-----TGVEIVPVHCSSSNGFQITV----EALEAALNQARKLGLKVKGVLITNPSNPLGT-TL 243 (471)
T ss_pred Ccccccce-------ec-----cCceEEEEEeecCCCccccH----HHHHHHHHHHHHhCCceeEEEEeCCCCCCCC-cc
Confidence 88733221 11 25555554332222333333 4555555422 2457777777766677674 45
Q ss_pred CchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccc-cc---cCCCccee----eeccccc-CccceEEEEeC-HHHH
Q 011777 270 APGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGF-ET---QGVIPDIV----TMAKGIG-NGLPLGAVVTT-PEIA 339 (477)
Q Consensus 270 ~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~-~~---~gv~pDiv----t~sK~lg-~G~pig~v~~~-~~~~ 339 (477)
+++.|..+.+.+.++++.+|+||||+|--+....+.++ +. ....+|-+ ++||-+| .|+|+|.+... +++.
T Consensus 244 ~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne~Vv 323 (471)
T KOG0256|consen 244 SPEELISLLNFASRKNIHVISDEIYAGSVFDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVV 323 (471)
T ss_pred CHHHHHHHHHHHhhcceEEEeehhhcccccCccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecChHHH
Confidence 88889999999999999999999999754443233333 11 11245533 7999999 59999999885 5566
Q ss_pred HhhcccccccCCCCcHHHHHHHHHHHHh--hch---hhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEee
Q 011777 340 NVMAQKIQFNTFGGNPVCSAGGLAVLRV--IDK---ERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVT 414 (477)
Q Consensus 340 ~~~~~~~~~~t~~~~~~~~aaa~a~l~~--l~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~ 414 (477)
....+....+.. ++..|--...-|.- ..+ .+..++++...+++.++|+++ ++..--++.|+|+|+++..
T Consensus 324 saA~kmssf~~v--Ss~tQ~~la~LLSD~~f~~~yl~en~~Rl~~rh~~~~~gLk~l----gI~cl~s~AGlF~wvDlr~ 397 (471)
T KOG0256|consen 324 SAATKMSSFGLV--SSQTQYLLASLLSDEEFTREYLRENNKRLRIRHRYIVEGLKAL----GIPCLKSNAGLFCWVDLRK 397 (471)
T ss_pred HHHHHHhhccCC--cHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhHHhc----CCceeecCCeeEEEEEhHH
Confidence 666654433322 33444333333321 101 122345555566666666665 4455567789999999865
Q ss_pred CCCCCCccHHHHHHHHHHHHHc-CceeeccCCC----CCEEEEeCCCCCcHHHHHHHHHHHHHHHh
Q 011777 415 DRKEKTPAKAETAVLFEKLREL-GVLVGKGGLH----GNVFRIKPPMCFTKDDADFLVDALDYSMS 475 (477)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~~~----~~~iRi~p~~~~t~e~i~~~l~~l~~~l~ 475 (477)
--.+.+- ..-.++++.+.++ ++.+.||... .+|+|+++. ...++.++-++++|...+.
T Consensus 398 lL~s~tf--e~El~Lw~~i~~~vklnlSpG~s~~C~EpGWFRvcFA-n~~~~t~~~am~Ri~~~~~ 460 (471)
T KOG0256|consen 398 LLTSLTF--EGELELWERILDNVKLNLSPGSSCHCHEPGWFRVCFA-NMSEETLEVAMRRLKQFLD 460 (471)
T ss_pred hcCcCCh--HHHHHHHHHHHHhhccccCCCCcceecCCCeEEEEec-cCCHHHHHHHHHHHHHHHH
Confidence 3222221 1223566666666 9999998542 479999753 3455556659999987764
No 247
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.81 E-value=1.5e-17 Score=158.04 Aligned_cols=333 Identities=18% Similarity=0.153 Sum_probs=199.4
Q ss_pred EeecCCcccccCCCCCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhc
Q 011777 99 LDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLS 178 (477)
Q Consensus 99 lD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~ 178 (477)
+||.|.++. | .+|++++++.+.-. ......+.++...++.+++++.++. ..++|+.|||.||..+|....
T Consensus 2 ~~f~SDn~~---g-~~~~m~eam~~a~~--~~~~~YG~D~~~~~~e~~~ae~~g~--~a~~Fv~sGT~aN~lal~~~~-- 71 (342)
T COG2008 2 IDFRSDNVA---G-PTPEMREALAAANA--VGDDVYGEDPTTNALEQRIAELFGK--EAALFVPSGTQANQLALAAHC-- 71 (342)
T ss_pred CccccCccC---C-CCHHHHHHHHhccc--cCCCCCCCCHHHHHHHHHHHHHhCC--ceEEEecCccHHHHHHHHHhc--
Confidence 577776653 3 68999999977542 1222334577889999999999965 789999999999999998554
Q ss_pred cCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhcc--CCCCeeEEE
Q 011777 179 TGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFG--TSGKVAGFI 256 (477)
Q Consensus 179 ~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~--~~~~~a~vi 256 (477)
++...++....-|-++..+-+..-. .+....+......+.+. +++++..|... +...+..++
T Consensus 72 -~~~~~vi~~~~aHi~~~E~Ga~~~~---------~~~~~~~~~~g~~Gklt------~e~v~~~i~~~d~~~~~~~~~~ 135 (342)
T COG2008 72 -QPGESVICHETAHIYTDECGAPEFF---------GGGQKLPIVPGADGKLT------PEDVEAAIRPDDIHHAPTPLAV 135 (342)
T ss_pred -CCCCeEEEeccccceecccCcHHHH---------cCCceeccCCCCCCCcC------HHHHHHhhcCCCcccCCCceEE
Confidence 4444555555666554433222110 11111111111111122 58888877621 334556666
Q ss_pred ecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccC--ccCCCCCCccccccCCCcceeeecccccCccceEEEE-
Q 011777 257 AETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTG--FGRTGSHYWGFETQGVIPDIVTMAKGIGNGLPLGAVV- 333 (477)
Q Consensus 257 ~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g--fgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pig~v~- 333 (477)
.|...+++| .++|.++|++|.++||+||+.|+.|-+--. .-..| -....+.-..|+++++=+-++|+|.|+|+
T Consensus 136 ~e~~~te~G-tVy~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg---~~~~~~~~~~D~v~~~~tK~g~~~~gAiv~ 211 (342)
T COG2008 136 LENTATEGG-TVYPLDELEAISAVCKEHGLPLHMDGARLANALVALG---VALKTIKSYVDSVSFCLTKGGGAPVGAIVF 211 (342)
T ss_pred EeeccCCCc-eecCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcC---CCHHHHHhhCCEEEEecccCCcceeeeEEE
Confidence 666556777 567899999999999999999999964210 00011 01122233467776543334567777665
Q ss_pred eCHHHHHhhccc--ccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEE
Q 011777 334 TTPEIANVMAQK--IQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGME 411 (477)
Q Consensus 334 ~~~~~~~~~~~~--~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~ 411 (477)
+++++++.+... ..++-+....+..++++.+|+.---.....|..++.++|.+++.+. .+.....+....++.+.
T Consensus 212 gn~~~~~~a~~~rK~~Ggl~~k~r~laA~~~~~l~~~~~~~~~~Han~mA~~La~~~~~~---~G~~~~~~~~tN~vf~~ 288 (342)
T COG2008 212 GNRDFAKRARRWRKRAGGLMRKARFLAAQGLYALEDDVWRLAADHANAMAARLAEGLEAK---PGVKLAFPVETNMVFVR 288 (342)
T ss_pred cCHHHHHHHHHHHHHhcccHhhhhHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhhhc---CCceeccCCcccEEEEE
Confidence 588888776542 4556666666767777777652111112233333455565555532 23222333566677776
Q ss_pred EeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHHH
Q 011777 412 LVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADFLVDALDYSM 474 (477)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l 474 (477)
+... ..........+...|+++.+.+ ..+||..+..++++||+++++.+++++
T Consensus 289 l~~~-------~i~~l~~~~~~~~~~~~~~~~~---~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 289 LPES-------AIEALRLAGALFYRGVLIGAHG---EIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred CChH-------HHHHHHhhchhheeeeeccCCC---ceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence 6321 0122233344445566554422 479999999999999999999998764
No 248
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.80 E-value=8.6e-18 Score=153.81 Aligned_cols=330 Identities=19% Similarity=0.166 Sum_probs=213.1
Q ss_pred EEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHH
Q 011777 97 RYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMAR 176 (477)
Q Consensus 97 ~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar 176 (477)
...|+-+-.-+. +..+.+++|.++.-.-. ..+.++...+|.++.+++++. +--+|+.|||..|.+|++.-.
T Consensus 22 ~~vDLRSDTvT~----PTdeMr~am~eA~vgDd---VyGeD~tt~rLE~~vA~l~GK--EAgLFv~SGTmgNllaIm~Hc 92 (384)
T KOG1368|consen 22 RSVDLRSDTVTV----PTDEMRRAMAEASVGDD---VYGEDPTTNRLEQRVAELFGK--EAGLFVPSGTMGNLLAIMVHC 92 (384)
T ss_pred eccccccccccC----ChHHHHHHHhhcccCcc---cccCCccHHHHHHHHHHHhCc--cceeeecccccccHHHHHHHh
Confidence 345666655432 44678888777543211 123456788999999999854 678999999999999999765
Q ss_pred hccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHh----ccCCCCe
Q 011777 177 LSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHID----FGTSGKV 252 (477)
Q Consensus 177 ~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~----~~~~~~~ 252 (477)
...|...|+-....-|-+..+.++.-+ ++...+..+.. |+...++++|+.+. ..+...+
T Consensus 93 ~~rg~eii~gd~~HI~~~E~gg~s~l~-----------gv~~~tv~~e~------dgtm~ledIe~~ir~~~GD~H~p~T 155 (384)
T KOG1368|consen 93 HQRGSEIIVGDRAHIHRYEQGGISQLA-----------GVHVRTVKNEN------DGTMDLEDIEAAIRVPKGDCHMPPT 155 (384)
T ss_pred cCCCceEEeccchheeehhccChhhhc-----------cceeEeeeeCC------CCeeeHHHHHHhhcCCCCCccCCCc
Confidence 533433333333344545444444322 23322221111 11112689999887 2345578
Q ss_pred eEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCcc---CCCCCCccccccCCCcce--eeecccccCcc
Q 011777 253 AGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFG---RTGSHYWGFETQGVIPDI--VTMAKGIGNGL 327 (477)
Q Consensus 253 a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfg---r~G~~~~~~~~~gv~pDi--vt~sK~lg~G~ 327 (477)
..|.+|..+++.|..+.|.+|+.+|.++|++||+.|+.|-+.- |- -.| -+...+.-..|. +||||++|.
T Consensus 156 ~LIclENT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi-~NAavasg---V~vk~i~~~fDSVsiCLSKglgA-- 229 (384)
T KOG1368|consen 156 KLICLENTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARI-FNAAVASG---VPVKKICSAFDSVSICLSKGLGA-- 229 (384)
T ss_pred eEEEeeccccccCceEeeHHHHHHHHHHHhccCCeeecchhhh-hhHHHHcC---CCHHHHHHhhhhhhhhhhccCCC--
Confidence 9999999777666577899999999999999999999996422 10 000 001111122454 479999975
Q ss_pred ce-EEEEeCHHHHHhhccc--ccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCC-Cceeee-
Q 011777 328 PL-GAVVTTPEIANVMAQK--IQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHD-IIGDVR- 402 (477)
Q Consensus 328 pi-g~v~~~~~~~~~~~~~--~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~-~~~~v~- 402 (477)
|+ +.+++++++++..+.. ..++.+....+.++|++.+|+. ....+.+-.++...+.+.++.. + +...+.
T Consensus 230 PVGSViVG~k~FI~kA~~~RKalGGGmRQsGvLaaaaLval~~--~~~~L~~dHk~A~~lAe~~~~~----~~i~v~v~a 303 (384)
T KOG1368|consen 230 PVGSVIVGSKDFIDKARHFRKALGGGMRQSGVLAAAALVALDE--NVPLLRADHKRAKELAEYINTP----EEIRVEVPA 303 (384)
T ss_pred CcccEEEccHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHhhc--chHHHHHHHHHHHHHHHHhccc----cceeeecch
Confidence 45 4678899988765432 3566677778888999988873 2234555555665565555532 2 223333
Q ss_pred ccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHH
Q 011777 403 GRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADFLVDALDYS 473 (477)
Q Consensus 403 g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~ 473 (477)
-+..|..+.+...+ ...+.+.+.+.+.||++..+. ...+|+.+...+|+++++..+..+.+.
T Consensus 304 ~etNiv~~~l~q~~-------~~~~~l~~~~~k~gi~lm~~~--s~r~Rivlh~Qvt~~~ve~~~~~~~k~ 365 (384)
T KOG1368|consen 304 VETNIVNMVLCQAR-------LTAEELCKFLEKNGILLMGGA--SRRIRIVLHHQVTDEDVEYVKSVLSKK 365 (384)
T ss_pred hhcceeeeeccccc-------CCHHHHHHHHHHCCeEEeecc--ccceEEEEEEecCHHHHHHHHHHHHHH
Confidence 45667777664322 236788999999999998764 345899999999999999999999543
No 249
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.79 E-value=7.5e-18 Score=168.09 Aligned_cols=286 Identities=19% Similarity=0.082 Sum_probs=164.9
Q ss_pred ChHHHHHHHHHHhhCCCC--CCEEEEeCChHHHHHHHHHHHHhc-----------cCCceEEEEccCccCCccccccccc
Q 011777 137 HHAIADFAEALASKMPGN--LKVVYFVNSGTEANELAMLMARLS-----------TGNLGMIALRNAYHGGSSGTIGLTA 203 (477)
Q Consensus 137 ~~~~~~l~~~La~~~~~~--~~~v~~~~sGseA~~~Al~~ar~~-----------~~~~~ii~~~~~yhG~~~~~~~~~~ 203 (477)
.+..++++++++++++.+ .+.++||+|||+|+..+++.++.. .+.+.+|+.....|..........+
T Consensus 37 ~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~~~~~~g 116 (345)
T cd06450 37 TEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEKAAAYLD 116 (345)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHHHHHHHHHh
Confidence 455667777788887653 347999999999999999988642 1223455555555554322222111
Q ss_pred CCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhcc--CCCCeeEEEecccCCCCCeeeCCchhHHHHHHHH
Q 011777 204 LNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFG--TSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIV 281 (477)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~--~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~ 281 (477)
. .+..++.. ..... | .++|++.++.. ...++++|++...++++|.+.+ +++|.++|
T Consensus 117 ~----------~~~~v~~~--~~~~~--d----~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~----~~~i~~~~ 174 (345)
T cd06450 117 V----------KVRLVPVD--EDGRM--D----PEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDP----LEEIADLA 174 (345)
T ss_pred c----------CeEEeeeC--CCCCc--C----HHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCC----HHHHHHHH
Confidence 1 11222211 11111 1 47788777621 1124555555555566776655 89999999
Q ss_pred HHhCcEEEEcCcccCccCCCCCCccccccCC-Cccee--eecccccCccceEEEEeCHHHHHhhcccccccCCCCcHHHH
Q 011777 282 RKAGGVCIADEVQTGFGRTGSHYWGFETQGV-IPDIV--TMAKGIGNGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCS 358 (477)
Q Consensus 282 ~~~gillI~DEv~~gfgr~G~~~~~~~~~gv-~pDiv--t~sK~lg~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~ 358 (477)
++||+++|+|++|.++.......... ..+. ..|.+ +++|.++++.++|+++.+ .+++
T Consensus 175 ~~~~~~l~vD~a~~~~~~~~~~~~~~-~~~~~~~d~~~~s~~K~l~~p~g~g~~~~~-------------------~~~~ 234 (345)
T cd06450 175 EKYDLWLHVDAAYGGFLLPFPEPRHL-DFGIERVDSISVDPHKYGLVPLGCSAVLVR-------------------ALKL 234 (345)
T ss_pred HHhCCeEEEechhhHHHhhChhhHHH-hcCccccCEEEEchhHhhCCCcchHHHHHH-------------------HHHH
Confidence 99999999999998653211000000 0111 34644 567988877778876555 2333
Q ss_pred HHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceee-eccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcC
Q 011777 359 AGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDV-RGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELG 437 (477)
Q Consensus 359 aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~G 437 (477)
.+++..+....-++..++..++.+++.+.|.++ +.+..+ ...+.++.+.+.... . ......++.+.|.++|
T Consensus 235 ~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~----~~~~~~~~~~~~iv~f~~~~~~---~-~~~~~~~i~~~L~~~g 306 (345)
T cd06450 235 WATLRRFGRDGYGEHIDRIVDLAKYLAELIRAD----PGFELLGEPNLSLVCFRLKPSV---K-LDELNYDLSDRLNERG 306 (345)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcC----CCeEEecCCceeEEEEEECCcc---h-hhHHHHHHHHHHHhcC
Confidence 333333322111345566666666666666553 222111 223445555552110 0 0123467888999997
Q ss_pred ceeeccCC--CCCEEEEeCCCCC-cHHHHHHHHHHHHH
Q 011777 438 VLVGKGGL--HGNVFRIKPPMCF-TKDDADFLVDALDY 472 (477)
Q Consensus 438 v~v~~~~~--~~~~iRi~p~~~~-t~e~i~~~l~~l~~ 472 (477)
+++.+... .++++|+++...+ |++|++++++.|++
T Consensus 307 ~~~~~~~~~~~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 307 GWHVPATTLGGPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred CEEEEeeEECCeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 65544322 2568999998765 99999999999875
No 250
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.79 E-value=2.2e-16 Score=160.78 Aligned_cols=321 Identities=13% Similarity=0.048 Sum_probs=186.8
Q ss_pred CCHHHHHHHHHHH-hhcccc--cccc--CChHHHHHHH----HHHhhCCCCCCEE-EEeCChHHHHHHHHHHHHhccCCc
Q 011777 113 CHPDVLNAIFEQS-KLLQHA--TTIY--LHHAIADFAE----ALASKMPGNLKVV-YFVNSGTEANELAMLMARLSTGNL 182 (477)
Q Consensus 113 ~~p~v~~Av~~~l-~~~~~~--~~~~--~~~~~~~l~~----~La~~~~~~~~~v-~~~~sGseA~~~Al~~ar~~~~~~ 182 (477)
.||+|++|+...+ .+.... ...+ .++...+|.+ +++++++. +.+ ++++||+.||.+++... ..+++
T Consensus 40 ~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~la~l~g~--~~alv~~~SG~~A~~~~l~al--~~~GD 115 (416)
T PRK13034 40 TSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERAKQLFGC--DYANVQPHSGSQANGAVYLAL--LKPGD 115 (416)
T ss_pred CCHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHHHHHhCC--CceEEecCCcHHHHHHHHHHh--cCCCC
Confidence 4899999999885 554321 1111 1567788887 99999865 345 56799999999998765 33667
Q ss_pred eEEEEccCccCC-cccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEe-ccc
Q 011777 183 GMIALRNAYHGG-SSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIA-ETI 260 (477)
Q Consensus 183 ~ii~~~~~yhG~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~-epi 260 (477)
.|++...+|.+. ..+........ .+....+.... .....| .+++++.++. .++++|++ +++
T Consensus 116 ~Vl~~~~~~~~~~~~g~~~~~~~~---------~~~~~~~~~~~-~~~~~d----~~~le~~l~~---~~~klVi~~~~~ 178 (416)
T PRK13034 116 TILGMSLSHGGHLTHGAKVSLSGK---------WYNAVQYGVDR-LTGLID----YDEVEELAKE---HKPKLIIAGFSA 178 (416)
T ss_pred EEEEcCccceeeeecCCcceeccc---------eeeeEEccccc-ccCCcC----HHHHHHHHhh---cCCeEEEECCCc
Confidence 788776666542 11211100000 00000000000 001111 4778887752 23567777 455
Q ss_pred CCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCccee--eecccccCccceEEEEeCHH-
Q 011777 261 QGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIV--TMAKGIGNGLPLGAVVTTPE- 337 (477)
Q Consensus 261 ~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDiv--t~sK~lg~G~pig~v~~~~~- 337 (477)
.+ ...+ +++|.++|++||++||+|++|+ +|-.+.... ....+ ..|++ +++|+++|+. -|+++++++
T Consensus 179 ~g---~~~d----l~~l~~la~~~g~~livD~Aha-~G~~~~g~~-~~~~~-~~Di~~~s~~K~l~g~~-GG~v~~~~~~ 247 (416)
T PRK13034 179 YP---RELD----FARFREIADEVGALLMVDMAHI-AGLVAAGEH-PNPFP-HAHVVTTTTHKTLRGPR-GGMILTNDEE 247 (416)
T ss_pred cc---cccC----HHHHHHHHHHcCCEEEEeCccc-ccCcccCCC-CCCCC-CceEEEEeCcccCCCCC-CeEEEECcHH
Confidence 44 3334 8999999999999999999986 554331110 11111 25666 5679996422 267777654
Q ss_pred HHHhhcccccccCC-CCcHHHHHHH-HHHHHhhch--hhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEe
Q 011777 338 IANVMAQKIQFNTF-GGNPVCSAGG-LAVLRVIDK--ERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELV 413 (477)
Q Consensus 338 ~~~~~~~~~~~~t~-~~~~~~~aaa-~a~l~~l~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~ 413 (477)
+.+.+......+.. +.++...+++ .+.++.++. .++.+++.++.++|+++|+++ .++.... .....+..+.+.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~--G~~~~~~-~~~t~i~~v~~~ 324 (416)
T PRK13034 248 IAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKER--GYDLVSG-GTDNHLLLVDLR 324 (416)
T ss_pred HHHHHHhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHc--CCEeccC-CCCCcEEEEEcC
Confidence 44444432222211 2223333333 344444432 345788889999999988765 2222211 124555566653
Q ss_pred eCCCCCCccHHHHHHHHHHHHHcCceeeccC--------CCCCEEEEeCCC----CCcHHHHHHHHHHHHHHHh
Q 011777 414 TDRKEKTPAKAETAVLFEKLRELGVLVGKGG--------LHGNVFRIKPPM----CFTKDDADFLVDALDYSMS 475 (477)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~--------~~~~~iRi~p~~----~~t~e~i~~~l~~l~~~l~ 475 (477)
... .....+.+.|.++||++...+ .....+|++++. .++++|++++++.|++++.
T Consensus 325 ~~~-------~~~~~~~~~L~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~~~~~ 391 (416)
T PRK13034 325 PKG-------LSGKDAEQALERAGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWILDVLD 391 (416)
T ss_pred CCC-------CCHHHHHHHHHhCCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHHHHHHh
Confidence 221 123456678888999987421 113579998888 7789999999999998875
No 251
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.79 E-value=2.1e-16 Score=161.81 Aligned_cols=333 Identities=14% Similarity=0.079 Sum_probs=188.0
Q ss_pred CEEEeecCCcccccCCCCCHHHHHHHHHHHhh-cc--cccccc--CChHHHHH----HHHHHhhCCCCCCEEEEeCChHH
Q 011777 96 RRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKL-LQ--HATTIY--LHHAIADF----AEALASKMPGNLKVVYFVNSGTE 166 (477)
Q Consensus 96 ~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~-~~--~~~~~~--~~~~~~~l----~~~La~~~~~~~~~v~~~~sGse 166 (477)
+.+|++.++... .+|+|.+|+.+.+.. .. +....+ ..+....+ ++++++.++.+...|++ +||++
T Consensus 25 ~~~~~l~~~~n~-----~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~i~~-~sgt~ 98 (416)
T PRK00011 25 EEHIELIASENF-----VSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGAEYANVQP-HSGSQ 98 (416)
T ss_pred hcCeeeecccCc-----CCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCCceeeec-CCchH
Confidence 455776665532 489999998776532 11 111111 11223333 34788888765544544 57899
Q ss_pred HHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhc
Q 011777 167 ANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDF 246 (477)
Q Consensus 167 A~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~ 246 (477)
|+..+++.. ..+++.|++..+.|.+.......... ...+...+..+.... .+..| .++++++++.
T Consensus 99 al~~~l~~l--~~~gd~Vl~~~~~~~~~~~~~~~~~~--------~~~g~~~~~~~~~~~-~~~~d----~~~l~~~i~~ 163 (416)
T PRK00011 99 ANAAVYFAL--LKPGDTILGMDLAHGGHLTHGSPVNF--------SGKLYNVVSYGVDEE-TGLID----YDEVEKLALE 163 (416)
T ss_pred HHHHHHHHh--cCCCCEEEEeccccCCcccccccccc--------ccceeeEeecCcCcc-cCCcC----HHHHHHHHHh
Confidence 999988765 23567888888887654221110000 001112221111100 01111 4788888762
Q ss_pred cCCCCeeEEEec-ccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCC--CCCCccccccCCCccee--eecc
Q 011777 247 GTSGKVAGFIAE-TIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRT--GSHYWGFETQGVIPDIV--TMAK 321 (477)
Q Consensus 247 ~~~~~~a~vi~e-pi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~--G~~~~~~~~~gv~pDiv--t~sK 321 (477)
.++++|++. ++. |...+ +++|.++|++||+++|+||+|. +|.. |.....+ + ..|++ +++|
T Consensus 164 ---~~~k~v~~~~~~~---~~~~~----~~~I~~la~~~~~~livD~a~~-~g~~~~g~~~~~~---~-~~di~~~S~~K 228 (416)
T PRK00011 164 ---HKPKLIIAGASAY---SRPID----FKRFREIADEVGAYLMVDMAHI-AGLVAAGVHPSPV---P-HADVVTTTTHK 228 (416)
T ss_pred ---cCCCEEEECCCcC---CCccC----HHHHHHHHHHcCCEEEEECcch-hcccccCccCCCC---C-CCcEEEecCCc
Confidence 245566663 432 33334 8999999999999999999985 3322 2111111 1 34655 5789
Q ss_pred cccCccceEEEEeC-HHHHHhhcccccccCCCCc-HHHHHHHHHH-HHhhch--hhHHHHHHHHHHHHHHHHHHHHHhCC
Q 011777 322 GIGNGLPLGAVVTT-PEIANVMAQKIQFNTFGGN-PVCSAGGLAV-LRVIDK--ERRQAHCADVGSHLLGRLRTLQERHD 396 (477)
Q Consensus 322 ~lg~G~pig~v~~~-~~~~~~~~~~~~~~t~~~~-~~~~aaa~a~-l~~l~~--~~~~~~~~~~~~~l~~~L~~l~~~~~ 396 (477)
++ +|++.|+++++ +++.+.+......++++.. ...+++...+ ++.+++ ++..++.+++.+++++.|+++ ...
T Consensus 229 ~l-~g~~gg~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~ 305 (416)
T PRK00011 229 TL-RGPRGGLILTNDEELAKKINSAVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAER--GFR 305 (416)
T ss_pred CC-CCCCceEEEeCCHHHHHHHHHHhCccccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC--CCe
Confidence 98 46788999995 6888877654333333322 2233333333 333322 456777888888888888764 111
Q ss_pred CceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccC--------CCCCEEEEeCC----CCCcHHHHH
Q 011777 397 IIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGG--------LHGNVFRIKPP----MCFTKDDAD 464 (477)
Q Consensus 397 ~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~--------~~~~~iRi~p~----~~~t~e~i~ 464 (477)
... -...+.++++.+... ......+.+.|.++||.+..+. ...+.+|+... ..++++|++
T Consensus 306 ~~~-~~~~~~~~~i~~~~~-------~~~~~~~~~~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~ 377 (416)
T PRK00011 306 VVS-GGTDNHLVLVDLRSK-------GLTGKEAEAALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMK 377 (416)
T ss_pred eee-cCCCCeEEEEeCccc-------CCCHHHHHHHHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHH
Confidence 111 012345666665311 0123467888889999987321 11346888532 256799999
Q ss_pred HHHHHHHHHHh
Q 011777 465 FLVDALDYSMS 475 (477)
Q Consensus 465 ~~l~~l~~~l~ 475 (477)
++++.|++++.
T Consensus 378 ~l~~~l~~~~~ 388 (416)
T PRK00011 378 EIAELIADVLD 388 (416)
T ss_pred HHHHHHHHHHh
Confidence 99999998865
No 252
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.79 E-value=2.3e-16 Score=158.03 Aligned_cols=321 Identities=14% Similarity=0.106 Sum_probs=188.0
Q ss_pred CEEEeecCCcccccCCCC--CHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHH
Q 011777 96 RRYLDAFAGIVTVSCGHC--HPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAML 173 (477)
Q Consensus 96 ~~ylD~~~g~~~~~lGh~--~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~ 173 (477)
+.+|+. +|.. .+||-+ +++|++++.+.++.+. ...+...+++++++++++. +.+++++|+|+|+.++++
T Consensus 8 ~~~ina-~g~~-t~~g~s~~~~~v~~a~~~~~~~~~-----~~~~~~~~~~~~~a~~~g~--~~~~~~~g~t~al~~al~ 78 (363)
T TIGR01437 8 KKVINA-SGKM-TILGVSTVSDEVADAQKRGAQNYF-----EIKELVNKTGEYIANLLGV--EDAVIVSSASAGIAQSVA 78 (363)
T ss_pred ceEEEC-CcEe-ecCCCCCCCHHHHHHHHHHHhcCC-----CHHHHHHHHHHHHHHhhCC--CeEEEEcCHHHHHHHHHH
Confidence 345553 3333 567765 8999999999876421 2346688999999999854 578999999999999998
Q ss_pred HHHhccCCc---------------eEEEEccCccCCc---ccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHH
Q 011777 174 MARLSTGNL---------------GMIALRNAYHGGS---SGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAAR 235 (477)
Q Consensus 174 ~ar~~~~~~---------------~ii~~~~~yhG~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (477)
.... +++ .||+..+.|+.+. ...+.. .|...+..+.. ... |
T Consensus 79 al~~--~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~------------~g~~~v~v~~~--~~~--d--- 137 (363)
T TIGR01437 79 AVIT--RGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRL------------GGGKVVEAGYA--NEC--S--- 137 (363)
T ss_pred HHhc--CCCcchhhcccccccccceEEEECccchhcCCchHHHHHh------------cCCeEEEEcCC--CCC--C---
Confidence 7643 333 5666555444321 011111 12222222111 111 1
Q ss_pred HHHHHHHHHhccCCCCeeEEE-ecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCc
Q 011777 236 YAQDLQDHIDFGTSGKVAGFI-AETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIP 314 (477)
Q Consensus 236 ~~~~le~~i~~~~~~~~a~vi-~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~p 314 (477)
.++++++|. +++++++ ++..++..|.+.+ +++|.++|++||+++|+|++|. + . ......+| .
T Consensus 138 -~~~le~ai~----~~t~ai~~v~~~~~~~g~~~~----~~~i~~~a~~~gi~vivD~a~~-~--~---~~~~~~~g--~ 200 (363)
T TIGR01437 138 -AEQLEAAIT----EKTAAILYIKSHHCVQKSMLS----VEDAAQVAQEHNLPLIVDAAAE-E--D---LQKYYRLG--A 200 (363)
T ss_pred -HHHHHHhcC----hhceEEEEEecCCCCcCCcCC----HHHHHHHHHHcCCeEEEECCCC-C--c---hHHHHHcC--C
Confidence 588888886 3445444 4544445565666 8999999999999999999996 1 1 11111123 4
Q ss_pred ceeee--cccccCccceEEEEeCHHHHHhhccccccc--CCCCcHHHHHHHHHHHHhhch--hhHHHHHHHHHHHHHHHH
Q 011777 315 DIVTM--AKGIGNGLPLGAVVTTPEIANVMAQKIQFN--TFGGNPVCSAGGLAVLRVIDK--ERRQAHCADVGSHLLGRL 388 (477)
Q Consensus 315 Divt~--sK~lg~G~pig~v~~~~~~~~~~~~~~~~~--t~~~~~~~~aaa~a~l~~l~~--~~~~~~~~~~~~~l~~~L 388 (477)
|++++ +|.++ |++.|++++++++++.+....++. .+......+++..++++.+.+ .+..+...++.++++++|
T Consensus 201 D~~~~S~~K~l~-gp~~G~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~gl~aAl~~~~~~~~~~~~~~~~~~~~l~~~L 279 (363)
T TIGR01437 201 DLVIYSGAKAIE-GPTSGLVLGKKKYIEWVKLQSKGIGRAMKVGKENILGLTAALEQYLSTGKESGAEMVAKLTPFIEAL 279 (363)
T ss_pred CEEEEeCCcccC-CCceEEEEEcHHHHHHHHhccCCCcceeccCHHHHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHH
Confidence 77765 59885 556899999988887664322111 111111233444445554432 233344444555677766
Q ss_pred HHHHHhCCCceee---eccce---eEEEEEeeCCCCCCccHHHHHHHHHHHHHcC--ceeeccCCCCCEEEEeCCCCCcH
Q 011777 389 RTLQERHDIIGDV---RGRGL---MVGMELVTDRKEKTPAKAETAVLFEKLRELG--VLVGKGGLHGNVFRIKPPMCFTK 460 (477)
Q Consensus 389 ~~l~~~~~~~~~v---~g~g~---~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~G--v~v~~~~~~~~~iRi~p~~~~t~ 460 (477)
.++ +.+... ...+. ...+.+.... ......++.+.|.++| |..++-....+.+|+.|.. .++
T Consensus 280 ~~i----~g~~~~~~~~~~~~~~~~~~v~~~~~~-----~g~~~~~l~~~L~~~~~~I~~r~~~~~~~~~~l~~~~-~~~ 349 (363)
T TIGR01437 280 NTL----KGVSASIVQDEAGRDIARAEIRFDESE-----LGMTAADVVQALRQGEPAIYTRGYKANEGIIEIDPRS-VTG 349 (363)
T ss_pred hcC----CCeEEEEecCCCCCcCceEEEEEeccC-----CCCCHHHHHHHHhcCCCCEEEeeeeecCCeEEEEeec-CCH
Confidence 654 222111 11111 1223332210 0112467888998877 6665433335688999875 679
Q ss_pred HHHHHHHHHHHHHH
Q 011777 461 DDADFLVDALDYSM 474 (477)
Q Consensus 461 e~i~~~l~~l~~~l 474 (477)
+|++.++++|++.+
T Consensus 350 ~e~~~~~~~l~~~~ 363 (363)
T TIGR01437 350 GQLDIIVERIREIV 363 (363)
T ss_pred HHHHHHHHHHHHhC
Confidence 99999999998753
No 253
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.78 E-value=2.5e-17 Score=165.60 Aligned_cols=291 Identities=15% Similarity=0.119 Sum_probs=184.3
Q ss_pred ccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCC
Q 011777 132 TTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPI 211 (477)
Q Consensus 132 ~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~ 211 (477)
..++.++...+|+++|+++.+. +.+++++||++|+..+++... .+++.|++....|++..........
T Consensus 34 y~r~~~p~~~~le~~la~l~g~--~~a~~~~sG~~Ai~~~l~~l~--~~gd~Vl~~~~~y~~~~~~~~~~~~-------- 101 (369)
T cd00614 34 YSRIGNPTVDALEKKLAALEGG--EAALAFSSGMAAISTVLLALL--KAGDHVVASDDLYGGTYRLFERLLP-------- 101 (369)
T ss_pred eECCCChhHHHHHHHHHHHHCC--CCEEEEcCHHHHHHHHHHHHc--CCCCEEEECCCCcchHHHHHHHHHh--------
Confidence 4456788899999999999864 568889999999999998663 3567788888888775322111100
Q ss_pred CCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEc
Q 011777 212 PQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIAD 291 (477)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~D 291 (477)
..|+....++. + + .+++++.++ .++++|++|.++++.|.+.+ +++|.++|++||+++|+|
T Consensus 102 -~~g~~~~~v~~------~-d----~~~l~~~i~----~~~~~v~~e~~~np~g~~~d----l~~i~~la~~~g~~livD 161 (369)
T cd00614 102 -KLGIEVTFVDP------D-D----PEALEAAIK----PETKLVYVESPTNPTLKVVD----IEAIAELAHEHGALLVVD 161 (369)
T ss_pred -hcCeEEEEeCC------C-C----HHHHHHhcC----CCCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEE
Confidence 01222222111 1 1 467777775 36789999999999998776 999999999999999999
Q ss_pred CcccCccCCCCCCccccccCCCccee--eecccccC-c-cceEEEEeCH-HHHHhhcccccccCCCCcHHHHHHHHHHHH
Q 011777 292 EVQTGFGRTGSHYWGFETQGVIPDIV--TMAKGIGN-G-LPLGAVVTTP-EIANVMAQKIQFNTFGGNPVCSAGGLAVLR 366 (477)
Q Consensus 292 Ev~~gfgr~G~~~~~~~~~gv~pDiv--t~sK~lg~-G-~pig~v~~~~-~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~ 366 (477)
+++... ... .......|++ +++|.++| | .+.|++++++ ++++.+...........+|+.+++++..|+
T Consensus 162 ~t~~~~-~~~------~~~~~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~g~~~~p~~a~~~l~~l~ 234 (369)
T cd00614 162 NTFATP-YLQ------RPLELGADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLRFLRLALGTILSPFDAWLLLRGLK 234 (369)
T ss_pred CCCcch-hcC------ChhhhCCcEEEeccceeccCCCCceEEEEEeCcHHHHHHHHHHHHhhCCCCCHHHHHHHHcCCC
Confidence 998632 111 1112345666 68899986 4 7889999987 887777654332334566777777666665
Q ss_pred hhchhhHHHHHHHHHHHHHHHHHHHHH----hCCCce----------eeeccceeEEEEEeeCCCCCCccHHHHHHHHHH
Q 011777 367 VIDKERRQAHCADVGSHLLGRLRTLQE----RHDIIG----------DVRGRGLMVGMELVTDRKEKTPAKAETAVLFEK 432 (477)
Q Consensus 367 ~l~~~~~~~~~~~~~~~l~~~L~~l~~----~~~~~~----------~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~ 432 (477)
.+ +...++..++.+++.+.|++... .||... ...+.|.++.+++.. ......++.+.
T Consensus 235 tl--~~r~~~~~~na~~la~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~~-------~~~~~~~f~~~ 305 (369)
T cd00614 235 TL--PLRMERHSENALKVAEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELKG-------GLEAAKKFLNA 305 (369)
T ss_pred CH--HHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeCC-------CHHHHHHHHHc
Confidence 33 23456666677777777765310 022110 123568888888742 12234445544
Q ss_pred HHHcCcee----------ecc---------------CCCCCEEEEeCCCCCcHHHHHHHHHHHHHHH
Q 011777 433 LRELGVLV----------GKG---------------GLHGNVFRIKPPMCFTKDDADFLVDALDYSM 474 (477)
Q Consensus 433 l~~~Gv~v----------~~~---------------~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l 474 (477)
|.--.+.. .+. |...+.+|++..+ |+.+.+++-|++++
T Consensus 306 l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~liR~svGl----E~~~dl~~dl~~al 368 (369)
T cd00614 306 LKLFSLAVSLGGVESLVEHPASMTHSQLPPEERAAAGITPGLVRLSVGI----EDVEDLIADLEQAL 368 (369)
T ss_pred CCcceEcccCCCCceeeeCCcccccccCCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHhh
Confidence 43211110 010 1124689997665 67777888888776
No 254
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.78 E-value=1.9e-16 Score=152.27 Aligned_cols=296 Identities=14% Similarity=0.095 Sum_probs=198.3
Q ss_pred EEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHH
Q 011777 157 VVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARY 236 (477)
Q Consensus 157 ~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (477)
.+++|+|.+.+.+.+++++.. ..+.|++-+.+|.+....... .|+..+|++.... +.+
T Consensus 126 diiit~G~t~~l~~~l~~~~N--~gd~vlie~~ty~~AL~s~~a-------------~gv~~ipv~md~~---Gi~---- 183 (472)
T KOG0634|consen 126 DIIITNGNTDGLFKVLRTLIN--RGDHVLIEEYTYPSALQSMEA-------------LGVKIIPVKMDQD---GID---- 183 (472)
T ss_pred eEEEecCCchHHHHHHHHhhc--CCCceEEecccchHHHHhccc-------------cCceEEeccccCC---CCC----
Confidence 699999999999999998865 556777777777654332222 2455555544211 111
Q ss_pred HHHHHHHHhccCC-----CCeeEEEecc-cCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCC---CC-----
Q 011777 237 AQDLQDHIDFGTS-----GKVAGFIAET-IQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRT---GS----- 302 (477)
Q Consensus 237 ~~~le~~i~~~~~-----~~~a~vi~ep-i~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~---G~----- 302 (477)
.+.|++++..... .+.....+-| -||++|. ..+.+--++|.+||+||++++|.||+|--+-.. ++
T Consensus 184 pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~-tls~errk~iy~LArKyDfLIVeDdpYy~Lq~~~y~~~~~~~~ 262 (472)
T KOG0634|consen 184 PESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGN-TLSLERRKKIYQLARKYDFLIVEDDPYYFLQMNTYNPSLELES 262 (472)
T ss_pred HHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCC-ccCHHHHHHHHHHHHHcCEEEEecCccceeeccccCCCccccC
Confidence 4888888875432 2356666777 7788885 457888899999999999999999998744332 10
Q ss_pred --------------CCccccccCCCcceeeecccccCccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhh
Q 011777 303 --------------HYWGFETQGVIPDIVTMAKGIGNGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVI 368 (477)
Q Consensus 303 --------------~~~~~~~~gv~pDivt~sK~lg~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l 368 (477)
.+...+..|.+..+-+|||-++.|+|+||+.+++-+++.........|-+.+.+++....+.|+..
T Consensus 263 p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiiaPGlRlG~it~~~~~l~ril~~ae~~t~~pSg~sq~iv~a~l~~w 342 (472)
T KOG0634|consen 263 PAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAPGLRLGWITGNSLFLKRILDLAEVATSGPSGFSQGIVYAMLKRW 342 (472)
T ss_pred ccccHHHHHHhhcCCcccccccccEEeccchhhhhcCcceeEEeecCHHHHHHHhhhcceeecCcccccHHHHHHHHHHH
Confidence 111223334444455899999999999999999988877766666677778888888888888877
Q ss_pred chhhHHHHHHHH---HHHHHHHHHHHHHhC-CC---ceeeeccceeEEEEEeeCC-CCCCccHHHHHHHHHHHHHcCcee
Q 011777 369 DKERRQAHCADV---GSHLLGRLRTLQERH-DI---IGDVRGRGLMVGMELVTDR-KEKTPAKAETAVLFEKLRELGVLV 440 (477)
Q Consensus 369 ~~~~~~~~~~~~---~~~l~~~L~~l~~~~-~~---~~~v~g~g~~~~i~~~~~~-~~~~~~~~~~~~~~~~l~~~Gv~v 440 (477)
.++++++.+.++ ....+..+-..+.++ |. ...++-.|+|+|+++.-.. +.+..-....+.+...+.++||.+
T Consensus 343 gqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~aGmFiwv~i~~~~~~~~~~i~q~~e~i~~~~vk~gV~~ 422 (472)
T KOG0634|consen 343 GQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPKAGMFIWVEIPYINFDTKKSINQIEEIIFIKAVKNGVKL 422 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecCCcceEEEEEecccccccccchHHHHHHHHHHHHHCCeEE
Confidence 776554444443 333344333334444 32 2334556999999985111 111111122345667888999999
Q ss_pred eccCCC--------CC-EEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 441 GKGGLH--------GN-VFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 441 ~~~~~~--------~~-~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
.+|..+ +. ++|++.++. +.|++++++++|..++++
T Consensus 423 v~G~~F~v~p~~s~~kiffRls~a~a-~~e~l~~g~~rf~~~ike 466 (472)
T KOG0634|consen 423 VCGSWFMVDPESSWSKIFFRLSIAFA-EPEKLDEGIERFGSVIKE 466 (472)
T ss_pred ecCceeEEcCccCCCcceEEEEeecC-CHHHHHHHHHHHHHHHHH
Confidence 887321 23 899988765 678999999999998874
No 255
>PLN02242 methionine gamma-lyase
Probab=99.78 E-value=6.2e-17 Score=164.37 Aligned_cols=259 Identities=15% Similarity=0.089 Sum_probs=163.7
Q ss_pred ccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCC
Q 011777 132 TTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPI 211 (477)
Q Consensus 132 ~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~ 211 (477)
++++.++...+|+++|+++.+. +.+++++||++|+..++..... .++.|++..+.|.+..........
T Consensus 70 Y~r~~~Pt~~~LE~~lA~l~g~--~~~l~~~sG~~Ai~~al~al~~--~GD~Vl~~~~~Y~~~~~~~~~~~~-------- 137 (418)
T PLN02242 70 YSRHFNPTVLNLGRQMAALEGT--EAAYCTASGMSAISSVLLQLCS--SGGHVVASNTLYGGTHALLAHFLP-------- 137 (418)
T ss_pred ccCCCChhHHHHHHHHHHHhCC--CeEEEEccHHHHHHHHHHHHhC--CCCEEEEcCCcHHHHHHHHHHhhh--------
Confidence 4456788999999999999854 6788999999999999986533 567888888877554221110000
Q ss_pred CCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEc
Q 011777 212 PQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIAD 291 (477)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~D 291 (477)
...|+....++. . | .++++++++ ++++++|++|.++|++|.+.+ +++|.++|++||+++|+|
T Consensus 138 ~~~G~~~~~~d~------~-d----~e~l~~~i~---~~~tklV~lesp~NPtG~v~d----l~~I~~la~~~gi~livD 199 (418)
T PLN02242 138 RKCNITTTFVDI------T-D----LEAVKKAVV---PGKTKVLYFESISNPTLTVAD----IPELARIAHEKGVTVVVD 199 (418)
T ss_pred hccCceEEEcCC------C-C----HHHHHHhcC---cCCCEEEEEecCCCCCCcccC----HHHHHHHHHHhCCEEEEE
Confidence 001222221111 0 1 477777775 225789999998888887775 999999999999999999
Q ss_pred CcccCccCCCCCCccccccCCCcceeeecccccC-ccc-eEEEEeCHHHHHhhcccccc--cCCCCcHHHHHHHHHHHHh
Q 011777 292 EVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIGN-GLP-LGAVVTTPEIANVMAQKIQF--NTFGGNPVCSAGGLAVLRV 367 (477)
Q Consensus 292 Ev~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg~-G~p-ig~v~~~~~~~~~~~~~~~~--~t~~~~~~~~aaa~a~l~~ 367 (477)
|+|+.+.. . ...+|...-+.++||.+++ |.+ .|++++++++++.+...... ..++..+..+.|++..+..
T Consensus 200 ea~~~~~~-~-----~~~~g~divv~S~SK~l~g~g~~~gG~iv~~~~li~~l~~~~~~~~~~~g~~~~~~~A~l~~~~l 273 (418)
T PLN02242 200 NTFAPMVL-S-----PARLGADVVVHSISKFISGGADIIAGAVCGPAELVNSMMDLHHGALMLLGPTMNPKVAFELSERL 273 (418)
T ss_pred CCCCccCC-C-----HHHcCCcEEEEeCccccCCCCCceEEEEEcCHHHHHHHHHHhhhhhhccCCCCCHHHHHHHHcCC
Confidence 99974432 1 1122433333468999986 666 58999999988887654332 2233444455555554432
Q ss_pred hchhhHHHHHHHHHHHHHHHHHHHHHh--CCCc----------eee---eccceeEEEEEeeCCCCCCccHHHHHHHHHH
Q 011777 368 IDKERRQAHCADVGSHLLGRLRTLQER--HDII----------GDV---RGRGLMVGMELVTDRKEKTPAKAETAVLFEK 432 (477)
Q Consensus 368 l~~~~~~~~~~~~~~~l~~~L~~l~~~--~~~~----------~~v---~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~ 432 (477)
-.-+...++..++.+++.+.|++...+ ||.. ... .|.|.|+.|++.. ...+.++++.
T Consensus 274 ~tl~~r~~~~~~~a~~la~~L~~~~~~V~yP~l~~~p~~~~~~~~~~~~~g~g~~~sf~l~~--------~~~~~~f~~~ 345 (418)
T PLN02242 274 PHLSLRMKEHCRRAMEYAKRMKELGLKVIYPGLEDHPQHALLKSMANKGYGFGGLLCLDMDT--------EERANRLMRY 345 (418)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHhCCCEEECCCCCCCccHHHHHHhcccCCCceeEEEEEECC--------HHHHHHHHHH
Confidence 112334567777888888888765211 1211 011 3678888998831 2234556666
Q ss_pred HH
Q 011777 433 LR 434 (477)
Q Consensus 433 l~ 434 (477)
+.
T Consensus 346 l~ 347 (418)
T PLN02242 346 LQ 347 (418)
T ss_pred hh
Confidence 54
No 256
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.77 E-value=1.5e-16 Score=159.18 Aligned_cols=302 Identities=20% Similarity=0.162 Sum_probs=183.6
Q ss_pred HHHHHHHhhccccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccc
Q 011777 119 NAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGT 198 (477)
Q Consensus 119 ~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~ 198 (477)
+++.+.+....+ +..+...++++.|+++++. +.+++++||++|++.+++..+. .+++.|++...+||+.....
T Consensus 3 ~~~~~~~~~~~~----~~~~~~~~~~~~la~~~~~--~~~~~~~sgt~al~~~l~~l~~-~~gd~vl~~~~~~~~~~~~~ 75 (352)
T cd00616 3 EAVEEVLDSGWL----TLGPKVREFEKAFAEYLGV--KYAVAVSSGTAALHLALRALGI-GPGDEVIVPSFTFVATANAI 75 (352)
T ss_pred HHHHHHHHcCCc----cCCHHHHHHHHHHHHHhCC--CeEEEECCHHHHHHHHHHHcCC-CCCCEEEeCCcchHHHHHHH
Confidence 445555544322 3456788999999999864 5788999999999999986632 35678999999998764433
Q ss_pred cccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHH
Q 011777 199 IGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVY 278 (477)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~ 278 (477)
... |...+..+... ..+..| ++++++.++ +++++|++.++ .|...+ +++|.
T Consensus 76 ~~~-------------g~~~~~~~~~~-~~~~~d----~~~l~~~i~----~~~~~v~~~~~---~G~~~~----~~~i~ 126 (352)
T cd00616 76 LLL-------------GATPVFVDIDP-DTYNID----PELIEAAIT----PRTKAIIPVHL---YGNPAD----MDAIM 126 (352)
T ss_pred HHc-------------CCeEEEEecCC-CcCCcC----HHHHHHhcC----cCCeEEEEECC---CCCcCC----HHHHH
Confidence 222 22222111111 011111 467777664 45677777643 454544 89999
Q ss_pred HHHHHhCcEEEEcCcccCccCCCCCCccccccCCCcceeeec----ccccCccceEEEEeC-HHHHHhhccccc------
Q 011777 279 DIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMA----KGIGNGLPLGAVVTT-PEIANVMAQKIQ------ 347 (477)
Q Consensus 279 ~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~s----K~lg~G~pig~v~~~-~~~~~~~~~~~~------ 347 (477)
++|+++|+++|+|++|+ +|... .-...+...|+.++| |.+++| +.|+++.+ +++.+.+.....
T Consensus 127 ~l~~~~~i~li~D~a~~-~g~~~----~~~~~~~~~d~~~~S~~~~K~~~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~ 200 (352)
T cd00616 127 AIAKRHGLPVIEDAAQA-LGATY----KGRKVGTFGDAGAFSFHPTKNLTTG-EGGAVVTNDEELAERARLLRNHGRDRD 200 (352)
T ss_pred HHHHHcCCeEEEECCCC-CCCeE----CCEEcccCcceeEEcCCCCCCCccc-CceEEEECCHHHHHHHHHHHHcCCCCC
Confidence 99999999999999997 33211 111223334666665 999543 44777775 577665542111
Q ss_pred ---------ccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeee---ccceeEEEEEeeC
Q 011777 348 ---------FNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVR---GRGLMVGMELVTD 415 (477)
Q Consensus 348 ---------~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~---g~g~~~~i~~~~~ 415 (477)
+.++..+++.++.++..++.+ ++..++.+++.+++++.|.++. ....+.... ....++.+.+...
T Consensus 201 ~~~~~~~~~~~~~~~~~~~aa~~~~~l~~~--~~~~~~~~~~~~~~~~~L~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~ 277 (352)
T cd00616 201 RFKYEHEILGYNYRLSEIQAAIGLAQLEKL--DEIIARRREIAERYKELLADLP-GIRLPDVPPGVKHSYHLYVIRLDPE 277 (352)
T ss_pred CCccccceeeeccCcCHHHHHHHHHHHHhh--HHHHHHHHHHHHHHHHHhcCCC-CccCCCCCCCCceeeEEEEEEECCc
Confidence 112344566666666655543 4566777778888888876641 111121111 1123334443210
Q ss_pred CCCCCccHHHHHHHHHHHHHcCceeeccCC------------------C-------CCEEEEeCCCCCcHHHHHHHHHHH
Q 011777 416 RKEKTPAKAETAVLFEKLRELGVLVGKGGL------------------H-------GNVFRIKPPMCFTKDDADFLVDAL 470 (477)
Q Consensus 416 ~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~------------------~-------~~~iRi~p~~~~t~e~i~~~l~~l 470 (477)
......++.+.|.++||.+..... . .+.+|+.+....|++||+.++++|
T Consensus 278 ------~~~~~~~v~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l 351 (352)
T cd00616 278 ------AGESRDELIEALKEAGIETRVHYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEAL 351 (352)
T ss_pred ------CCCCHHHHHHHHHHCCCCeeeecCccccCHhhhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHh
Confidence 011246788899999997652210 0 157999999999999999999887
Q ss_pred H
Q 011777 471 D 471 (477)
Q Consensus 471 ~ 471 (477)
+
T Consensus 352 ~ 352 (352)
T cd00616 352 R 352 (352)
T ss_pred C
Confidence 4
No 257
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.76 E-value=3.6e-16 Score=158.38 Aligned_cols=355 Identities=16% Similarity=0.113 Sum_probs=191.0
Q ss_pred eCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHH
Q 011777 92 DENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELA 171 (477)
Q Consensus 92 d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~A 171 (477)
-..|..||||.+-.++ ..+.+++.+++...... ....+...+|++.++++++. +.+++++||++|+..+
T Consensus 16 l~~~~v~iDlltds~t-------~ams~~~~~a~~~gd~~--Y~~~~g~~~Leeaia~~~g~--~~vv~t~~Gt~Al~la 84 (431)
T cd00617 16 LRSEDVYIDLLTDSGT-------GAMSDYQWAAMMLGDEA--YAGSKSFYDLEDAVQDLFGF--KHIIPTHQGRGAENIL 84 (431)
T ss_pred CCCCCcCCCCCCCCCc-------HHHHHHHHHHHHhCCCc--cCCCCCHHHHHHHHHHHHCC--CeEEEcCCHHHHHHHH
Confidence 3457789999876654 34555555555433211 12345578999999999854 6899999999999999
Q ss_pred HHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCC
Q 011777 172 MLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGK 251 (477)
Q Consensus 172 l~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~ 251 (477)
++... .+++ +|...+.|..+.......++.+.+. ...... ......++...+ | +++|+++|+.....+
T Consensus 85 ~~al~--~pGD-~V~~~~~f~~~~~~i~~~Ga~pv~v-~i~~~~--~~~~~~pf~gni--D----~e~Le~~I~~~~~~~ 152 (431)
T cd00617 85 FSILL--KPGR-TVPSNMHFDTTRGHIEANGAVPVDL-VIDEAH--DAQELIPFKGNI--D----VAKLEKLIDEVGAEN 152 (431)
T ss_pred HHHhC--CCCC-EEccCCcccchHHHHHhCCCEeEEE-eccccc--ccccccCCCCCc--C----HHHHHHHhCcccCCC
Confidence 87552 2344 4455555654433332222221110 000000 000000111112 2 588998887322345
Q ss_pred eeEEEecccCCC-CCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCc----------cCCCCCCcccc-ccCCCcceeee
Q 011777 252 VAGFIAETIQGV-GGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGF----------GRTGSHYWGFE-TQGVIPDIVTM 319 (477)
Q Consensus 252 ~a~vi~epi~~~-~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gf----------gr~G~~~~~~~-~~gv~pDivt~ 319 (477)
+++|+++..+|. +| .+.+.+.+++|.++|++||++||.|+++.-. |+.+.+....- ...-..|..+|
T Consensus 153 ~~~I~v~~p~N~~gG-~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~ei~~e~~s~sd~~~m 231 (431)
T cd00617 153 IPYIVLTITNNTAGG-QPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAEIAREMFSYADGCTM 231 (431)
T ss_pred ccEEEEECCcCCCCC-ccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHHHHHHHhhccCCEEEE
Confidence 777777654444 46 6678899999999999999999999996521 11110100000 00011333443
Q ss_pred c--ccccCccce-EEEEeCH-HHHHhhccc----ccccCCCCc-HHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHH
Q 011777 320 A--KGIGNGLPL-GAVVTTP-EIANVMAQK----IQFNTFGGN-PVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRT 390 (477)
Q Consensus 320 s--K~lg~G~pi-g~v~~~~-~~~~~~~~~----~~~~t~~~~-~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~ 390 (477)
| |..+ .++ |++++++ ++++.++.. ....++++. ..-++|...+|+...+.+.+++..+..+++.+.|.+
T Consensus 232 S~~K~~~--~~~GG~i~~~d~~l~~~~~~~~~~~~~~~~~gG~~~r~~~A~A~gL~e~~~~~~l~~~~~~r~~l~~~L~~ 309 (431)
T cd00617 232 SAKKDGL--VNIGGFLALRDDELYEEARQRVVLYEGFVTYGGMAGRDMEALAQGLREAVEEDYLRHRVEQVRYLGDRLDE 309 (431)
T ss_pred EeecCCC--CccceEEEeCcHHHHHHHHHhccccCCccccccccHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 3 3322 223 5888886 588777632 112234443 333333333665432233333334444666666665
Q ss_pred HHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHH-HHHHHcCceeeccCC---------------CCCEEEEeC
Q 011777 391 LQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLF-EKLRELGVLVGKGGL---------------HGNVFRIKP 454 (477)
Q Consensus 391 l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~-~~l~~~Gv~v~~~~~---------------~~~~iRi~p 454 (477)
. ++....+..|.+++++...-.....+.......++ +.+.+.||.+..-|. .-+.+|+..
T Consensus 310 ~----G~~v~~P~Ggh~v~~d~~~~~~~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~~rl~~ 385 (431)
T cd00617 310 A----GVPIVEPAGGHAVFIDAREFLPHIPQEQFPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELELVRLAI 385 (431)
T ss_pred C----CCCccCCCcceEEEEEhHHhcCCCCcccCcHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccceeEEec
Confidence 4 33222334456667765421100000111234555 455566787543111 125789987
Q ss_pred CC-CCcHHHHHHHHHHHHHHHhh
Q 011777 455 PM-CFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 455 ~~-~~t~e~i~~~l~~l~~~l~~ 476 (477)
|- ..|.+++|.+.+.|.+++++
T Consensus 386 prr~~t~~~~~~~~~~~~~~~~~ 408 (431)
T cd00617 386 PRRVYTQDHMDYVAAAVIALYER 408 (431)
T ss_pred cccccCHHHHHHHHHHHHHHHhh
Confidence 76 67999999999999988753
No 258
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.76 E-value=6.7e-16 Score=151.16 Aligned_cols=322 Identities=19% Similarity=0.207 Sum_probs=206.2
Q ss_pred CHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCC-CCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCcc
Q 011777 114 HPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGN-LKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYH 192 (477)
Q Consensus 114 ~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~-~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yh 192 (477)
+|+|.+|+.+..-. |.+.. ......++.++|...+... .+.++++.|||-|+|+++..... +.++|+++.++..
T Consensus 17 ~~~V~~am~~~~~~--h~s~~-F~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl~~--pgdkVLv~~nG~F 91 (383)
T COG0075 17 PPRVLLAMARPMVG--HRSPD-FVGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASLVE--PGDKVLVVVNGKF 91 (383)
T ss_pred CHHHHHHhcCCCCC--CCCHH-HHHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhccC--CCCeEEEEeCChH
Confidence 68888888664422 33222 2355677888888888654 36788889999999999985533 6789999999998
Q ss_pred CCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCch
Q 011777 193 GGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPG 272 (477)
Q Consensus 193 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~ 272 (477)
|....-+.-.. |.....+...+..+++ ++++++++++. +++.+|.+-.+-.++|+..|
T Consensus 92 G~R~~~ia~~~-----------g~~v~~~~~~wg~~v~------p~~v~~~L~~~--~~~~~V~~vH~ETSTGvlnp--- 149 (383)
T COG0075 92 GERFAEIAERY-----------GAEVVVLEVEWGEAVD------PEEVEEALDKD--PDIKAVAVVHNETSTGVLNP--- 149 (383)
T ss_pred HHHHHHHHHHh-----------CCceEEEeCCCCCCCC------HHHHHHHHhcC--CCccEEEEEeccCcccccCc---
Confidence 87655443321 1111111112333343 58899998832 34444444444456677777
Q ss_pred hHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCcceeeecccccCccceEEEEeCHHHHHhhccccc-----
Q 011777 273 YLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIGNGLPLGAVVTTPEIANVMAQKIQ----- 347 (477)
Q Consensus 273 ~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pig~v~~~~~~~~~~~~~~~----- 347 (477)
+++|.++|++||+++|+|.|-+ || | ..+..+.||+..-+..--|++++...+|++..+++..+.+....+
T Consensus 150 -l~~I~~~~k~~g~l~iVDaVsS-~G--g-~~~~vd~wgiDv~itgSQK~l~~PPGla~v~~S~~a~e~~~~~~~~~~yl 224 (383)
T COG0075 150 -LKEIAKAAKEHGALLIVDAVSS-LG--G-EPLKVDEWGIDVAITGSQKALGAPPGLAFVAVSERALEAIEERKHPSFYL 224 (383)
T ss_pred -HHHHHHHHHHcCCEEEEEeccc-CC--C-cccchhhcCccEEEecCchhccCCCccceeEECHHHHHHHhcCCCCceee
Confidence 9999999999999999999876 43 3 455566777643333345999987778999999998877754311
Q ss_pred ------------ccC-CCCcHHHHHHHHHHHHhhchhh---HHHHHHHHHHHHHHHHHHHHHhCCCceeeeccc-eeEEE
Q 011777 348 ------------FNT-FGGNPVCSAGGLAVLRVIDKER---RQAHCADVGSHLLGRLRTLQERHDIIGDVRGRG-LMVGM 410 (477)
Q Consensus 348 ------------~~t-~~~~~~~~aaa~a~l~~l~~~~---~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g-~~~~i 410 (477)
..+ |..+.....+..++|+.+.++. ..++.+++.+.+++++.++. .....+..-.. .+..+
T Consensus 225 DL~~~~~~~~~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~alG--l~~~~~~~~~s~tvta~ 302 (383)
T COG0075 225 DLKKWLKYMEKKGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEALG--LELFADPERRSPTVTAI 302 (383)
T ss_pred cHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcC--CccccCcccCCCceEEE
Confidence 122 3333444455568899887754 45666666777777777652 22222111111 12222
Q ss_pred EEeeCCCCCCccHHHHHHHHHHHHH-cCceeeccC--CCCCEEEEeCCCCCcHHHHHHHHHHHHHHHhhC
Q 011777 411 ELVTDRKEKTPAKAETAVLFEKLRE-LGVLVGKGG--LHGNVFRIKPPMCFTKDDADFLVDALDYSMSKL 477 (477)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~--~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~l 477 (477)
.. |.+....++...+++ .|+.+..+- ..+..+||...-..+.+++..++.+|+.++.++
T Consensus 303 ~~--------P~g~~~~~~~~~~~~~~g~~i~gg~~~l~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~ 364 (383)
T COG0075 303 KV--------PEGVDDKKVRRALLKEYGVEIAGGQGPLKGKIFRIGHMGNVRPEDVLAALAALEAALREL 364 (383)
T ss_pred EC--------CCCCCcHHHHHHHHHhCCEEecccccccCccEEEEecCccCCHHHHHHHHHHHHHHHHHc
Confidence 22 222222233334554 488887652 345799999888899999999999999998753
No 259
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.75 E-value=1.4e-16 Score=159.46 Aligned_cols=290 Identities=15% Similarity=0.144 Sum_probs=170.3
Q ss_pred CCCCHHHHHHHHHHHhhccccccc--c-----CChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhc---cC
Q 011777 111 GHCHPDVLNAIFEQSKLLQHATTI--Y-----LHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLS---TG 180 (477)
Q Consensus 111 Gh~~p~v~~Av~~~l~~~~~~~~~--~-----~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~---~~ 180 (477)
|..++.|.+++.+.+......... + ..+...+++++|+++++.+.+.|+|++|+++|++.+++..... .+
T Consensus 8 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g 87 (353)
T TIGR03235 8 TPIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEALGADTEEVIFTSGATESNNLAILGLARAGEQKG 87 (353)
T ss_pred CCCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhcccCC
Confidence 346899999999887542111111 0 1134678999999999877778999999999999998865432 22
Q ss_pred CceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEeccc
Q 011777 181 NLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETI 260 (477)
Q Consensus 181 ~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi 260 (477)
++.|++.. ..|............ .|+....++.......+ .+++++.++ +++++|+++.+
T Consensus 88 ~~~vi~~~-~~~~s~~~~~~~~~~---------~G~~v~~v~~~~~~~~d------~~~l~~~l~----~~~~lv~~~~~ 147 (353)
T TIGR03235 88 KKHIITSA-IEHPAVLEPIRALER---------NGFTVTYLPVDESGRID------VDELADAIR----PDTLLVSIMHV 147 (353)
T ss_pred CCeeeEcc-cccHHHHHHHHHHHh---------cCCEEEEEccCCCCcCC------HHHHHHhCC----CCCEEEEEEcc
Confidence 24455543 334332211111000 12222222221111111 477777775 35788888888
Q ss_pred CCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCcceeeec--ccccCccceEEEEeCHHH
Q 011777 261 QGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMA--KGIGNGLPLGAVVTTPEI 338 (477)
Q Consensus 261 ~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~s--K~lg~G~pig~v~~~~~~ 338 (477)
++++|.+.+ +++|.++|+++|+++|+|++|. +|.. . ++.....+|++++| |.++ ...+|+++++++.
T Consensus 148 ~n~tG~~~~----~~~I~~l~~~~~~~~ivD~a~~-~g~~---~--~~~~~~~~D~~~~s~~K~~g-p~g~g~l~~~~~~ 216 (353)
T TIGR03235 148 NNETGSIQP----IREIAEVLEAHEAFFHVDAAQV-VGKI---T--VDLSADRIDLISCSGHKIYG-PKGIGALVIRKRG 216 (353)
T ss_pred cCCceeccC----HHHHHHHHHHcCCEEEEEchhh-cCCc---c--ccccccCCCEEEeehhhcCC-CCceEEEEEccCc
Confidence 889998877 8999999999999999999987 4322 2 22223357888776 9753 2348999998875
Q ss_pred HHh--hccccc-------ccCCCCcHHHHHHHHHHHHhhch--hhHHHHHHHHHHHHHHHHHHHHHhCCCceeee-ccce
Q 011777 339 ANV--MAQKIQ-------FNTFGGNPVCSAGGLAVLRVIDK--ERRQAHCADVGSHLLGRLRTLQERHDIIGDVR-GRGL 406 (477)
Q Consensus 339 ~~~--~~~~~~-------~~t~~~~~~~~aaa~a~l~~l~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~-g~g~ 406 (477)
.+. +..... ......|....++..++++.+.+ ++..++.+++.++++++|++. ......... ....
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~--g~~~~~~~~~~~~~ 294 (353)
T TIGR03235 217 KPKAPLKPIMFGGGQERGLRPGTLPVHLIVGMGEAAEIARRNAQAWEVKLRAMRNQLRDALQTL--GVKLNGDPAETIPH 294 (353)
T ss_pred ccccccCceeeCCCCcCccccCCCChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccC--CeEEeCCcccccCC
Confidence 322 121101 11223455666666777776643 345667777777777766542 111111111 1122
Q ss_pred eEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeecc
Q 011777 407 MVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKG 443 (477)
Q Consensus 407 ~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~ 443 (477)
+..+.+. .....++.+.|.+ ||.+.+|
T Consensus 295 i~~~~~~---------~~~~~~v~~~L~~-~i~v~~g 321 (353)
T TIGR03235 295 ILNFSID---------GVNSEALIVNLRA-DAAVSTG 321 (353)
T ss_pred EEEEEeC---------CcCHHHHHHHHhC-CeEEEch
Confidence 3333321 1124567777754 8888876
No 260
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.75 E-value=8.6e-16 Score=158.68 Aligned_cols=285 Identities=18% Similarity=0.160 Sum_probs=167.9
Q ss_pred HHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeee
Q 011777 140 IADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHV 219 (477)
Q Consensus 140 ~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (477)
..++.+.++++++.+.+++.+++||+++++.++... ...++++|++.++.|+.+ ......... ..|...+
T Consensus 114 ~~e~~~~la~l~g~~~~~v~~~~g~t~~~~~~~~a~-~~~~g~~Vlv~~~~~~~~-~~~~~~~~~--------~~G~~~~ 183 (447)
T PRK00451 114 IFEYQTMICELTGMDVANASMYDGATALAEAALMAV-RITKRKKVLVSGAVHPEY-REVLKTYLK--------GQGIEVV 183 (447)
T ss_pred HHHHHHHHHHHhCCCcceEEecCcHHHHHHHHHHHH-HhcCCCEEEEeCccCHHH-HHHHHHHHH--------hCCcEEE
Confidence 445557779988877778999999999888777543 334567788876655433 222211000 0122222
Q ss_pred cCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEE--cCcccCc
Q 011777 220 VNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIA--DEVQTGF 297 (477)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~--DEv~~gf 297 (477)
.+|.... ..+ .+++++.++ +++++|++... +.+|.+.+ +++|.++|+++|+++|+ |.+..|+
T Consensus 184 ~v~~~~~-~~d------~~~l~~~i~----~~t~~v~l~~p-n~tG~v~~----l~~I~~~a~~~~~~~iv~~d~~~~g~ 247 (447)
T PRK00451 184 EVPYEDG-VTD------LEALEAAVD----DDTAAVVVQYP-NFFGVIED----LEEIAEIAHAGGALFIVGVDPVSLGL 247 (447)
T ss_pred EecCCCC-CCC------HHHHHHhcC----CCeEEEEEECC-CCCCeeCC----HHHHHHHHHHCCCEEEEEcChHHhcc
Confidence 2221111 111 577877775 45777777665 56787766 99999999999999998 6553221
Q ss_pred cCCCCCCccccccCCCcceee-----eccccc-CccceEEEEeCHHHHHhhccc--------------------------
Q 011777 298 GRTGSHYWGFETQGVIPDIVT-----MAKGIG-NGLPLGAVVTTPEIANVMAQK-------------------------- 345 (477)
Q Consensus 298 gr~G~~~~~~~~~gv~pDivt-----~sK~lg-~G~pig~v~~~~~~~~~~~~~-------------------------- 345 (477)
.. ... ....|+++ |||.+. +|+++|++++++++++.+...
T Consensus 248 --~~----~~~--~~~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 319 (447)
T PRK00451 248 --LK----PPG--EYGADIVVGEGQPLGIPLSFGGPYLGFFATRKKLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIR 319 (447)
T ss_pred --CC----Ccc--cCCCCEEEECCCcCCCCCCCCCCCchHHHhhHHHHhhCCCCEeeeecccCCCeeeEeeccccccccc
Confidence 11 011 23456664 456665 578999999999988874211
Q ss_pred --ccccCCCCcHHHH-HHHHHHHHhhch---hhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEE---EEEeeCC
Q 011777 346 --IQFNTFGGNPVCS-AGGLAVLRVIDK---ERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVG---MELVTDR 416 (477)
Q Consensus 346 --~~~~t~~~~~~~~-aaa~a~l~~l~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~---i~~~~~~ 416 (477)
....+++.+...+ .++..+++.+.+ ++..+++.++.++++++|+++ +.+... .+.++. +.+ +
T Consensus 320 ~~~~~~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~----~g~~~~--~~~~~~~~~v~~--~- 390 (447)
T PRK00451 320 REKATSNICTNQALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEI----GGVELF--DGPFFNEFVVRL--P- 390 (447)
T ss_pred cccccccccccHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhc----CCEEec--CCCeEEEEEEec--C-
Confidence 1111222222222 333334554433 344566666666776666553 322212 222222 222 1
Q ss_pred CCCCccHHHHHHHHHHHHHcCceee-ccCC----CCCEEEEeCCCCCcHHHHHHHHHHHHHHH
Q 011777 417 KEKTPAKAETAVLFEKLRELGVLVG-KGGL----HGNVFRIKPPMCFTKDDADFLVDALDYSM 474 (477)
Q Consensus 417 ~~~~~~~~~~~~~~~~l~~~Gv~v~-~~~~----~~~~iRi~p~~~~t~e~i~~~l~~l~~~l 474 (477)
. ...++.+.|+++|+... ++.. ..+++|++++..+|++||+++++.|++++
T Consensus 391 -----~--~~~~~~~~L~~~gi~~~~~~~~~~~~~~~~~rvs~~~~~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 391 -----K--PAEEVNEALLEKGILGGYDLGRYYPELGNHLLVCVTEKRTKEDIDALVAALGEVL 446 (447)
T ss_pred -----C--CHHHHHHHHHhcCCCCCcccccccCCcCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 0 13578899999988742 1111 13689999988899999999999998865
No 261
>PRK07049 methionine gamma-lyase; Validated
Probab=99.74 E-value=7.6e-16 Score=157.00 Aligned_cols=223 Identities=14% Similarity=0.060 Sum_probs=144.1
Q ss_pred ccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCC
Q 011777 132 TTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPI 211 (477)
Q Consensus 132 ~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~ 211 (477)
.++|.++....|.++|+++.+. +.+++++||++|+..++..... +++.|++.++.|.+..........
T Consensus 77 y~R~~~Pt~~~Le~~lA~leg~--~~~iv~~sG~~Ai~~~l~al~~--~Gd~Vv~~~p~Y~~~~~~~~~~l~-------- 144 (427)
T PRK07049 77 YSRFNHPNSEIVEDRLAVYEGA--ESAALFSSGMSAIATTLLAFVR--PGDVILHSQPLYGGTETLLAKTFR-------- 144 (427)
T ss_pred ccCCCCcCHHHHHHHHHHHhCC--CcEEEEccHHHHHHHHHHHHhC--CCCEEEEcCCCcccHHHHHHHHHH--------
Confidence 4567888899999999999854 5688999999999988875543 567899999999886443211100
Q ss_pred CCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhc-cCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHH------h
Q 011777 212 PQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDF-GTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRK------A 284 (477)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~-~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~------~ 284 (477)
..|+..+.+++. .| .+++++.+.. ...+++++|++|..+|++|.+.+ +++|.+++++ +
T Consensus 145 -~~Gi~~v~~~~~------~d----~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d----~~~l~~la~~~~~~~~~ 209 (427)
T PRK07049 145 -NFGVGAVGFADG------LS----EAAIGAAAEAAAAKGRVSLILIETPANPTNSLVD----VAAVRRVADAIEARQGH 209 (427)
T ss_pred -hcCcEEEEEeCC------CC----HHHHHHHHHhhccCCCceEEEEECCCCCCCcccC----HHHHHHHHHHhhhcccC
Confidence 013332322221 11 2556655542 12246789999988888886654 4555555554 8
Q ss_pred CcEEEEcCcccCccCCCCCCccccccCCCccee--eecccccC--ccceEEEEeCHHHHHhhcccccccCCCCcHHHHHH
Q 011777 285 GGVCIADEVQTGFGRTGSHYWGFETQGVIPDIV--TMAKGIGN--GLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAG 360 (477)
Q Consensus 285 gillI~DEv~~gfgr~G~~~~~~~~~gv~pDiv--t~sK~lg~--G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aa 360 (477)
++++|+||++.++.... . .+ ++ .|++ ++||.++| |+++|++++++++++.+.........+.+++.+.+
T Consensus 210 ~~~vvvDety~~~~~~~--p--l~-~g--~divv~S~SK~~gG~~glr~G~vv~~~~l~~~l~~~~~~~g~~ls~~~a~l 282 (427)
T PRK07049 210 RPIIACDNTLLGPVFQK--P--LE-HG--ADLSVYSLTKYVGGHSDLVAGAVLGRKALIRQVRALRSAIGTQLDPHSCWM 282 (427)
T ss_pred CCEEEEECCccccccCC--c--cc-cC--CCEEEEcCceeecCCCCcEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHH
Confidence 99999999976542211 1 11 23 3555 68999994 79999999999988887654333334467888777
Q ss_pred HHHHHHhhchhhHHHHHHHHHHHHHHHHHH
Q 011777 361 GLAVLRVIDKERRQAHCADVGSHLLGRLRT 390 (477)
Q Consensus 361 a~a~l~~l~~~~~~~~~~~~~~~l~~~L~~ 390 (477)
++..|+.+ ....++..++.+.+.+.|++
T Consensus 283 ~~r~L~tl--~~R~~~~~~~a~~la~~L~~ 310 (427)
T PRK07049 283 LGRSLETL--VLRMERANRNARAVAEFLRD 310 (427)
T ss_pred HHcCCChH--HHHHHHHHHHHHHHHHHHHh
Confidence 77766543 22234445555566665554
No 262
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.74 E-value=4.3e-16 Score=151.92 Aligned_cols=337 Identities=20% Similarity=0.183 Sum_probs=196.4
Q ss_pred CEEEeecCCcccccCCCCCHHHHHHHHHHHhhcc-ccccc-cC---ChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHH
Q 011777 96 RRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQ-HATTI-YL---HHAIADFAEALASKMPGNLKVVYFVNSGTEANEL 170 (477)
Q Consensus 96 ~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~-~~~~~-~~---~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~ 170 (477)
.-|||..+. |-++|+|.+|+.+.+.... ..... |. ....++.++.++++++.+.++|.||+++||+|.+
T Consensus 44 ~vyld~~at------~p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklInAd~~dIiFts~ATEs~Nl 117 (428)
T KOG1549|consen 44 PVYLDNQAT------GPMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLINADPSDIVFTSGATESNNL 117 (428)
T ss_pred cEEEecCcC------CCCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHhCCCCCcEEEeCCchHHHHH
Confidence 468887653 4479999999999887642 11111 22 3336788889999999888889999999999999
Q ss_pred HHHH-HHhcc-CCc-eEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhcc
Q 011777 171 AMLM-ARLST-GNL-GMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFG 247 (477)
Q Consensus 171 Al~~-ar~~~-~~~-~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~ 247 (477)
+++- ++.+. +.+ .||.+...|.-...++..+-... ..+..+|+++ ++...++.+++.|+
T Consensus 118 vl~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g--------~~Vt~lpv~~--------~~~~d~~~~~~~i~-- 179 (428)
T KOG1549|consen 118 VLKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEG--------LEVTYLPVED--------SGLVDISKLREAIR-- 179 (428)
T ss_pred HHHHhhccccccccceEEEecccCcchhHHHHHHHhcC--------eEEEEeccCc--------cccccHHHHHHhcC--
Confidence 9985 44433 233 45555444433333333332110 1333443332 22222577788776
Q ss_pred CCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCcceeeec--ccccC
Q 011777 248 TSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMA--KGIGN 325 (477)
Q Consensus 248 ~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~s--K~lg~ 325 (477)
.++.+|+++.++++.|++.| +++|.++|+++|+.+++|.+|. .|. ..++..++.+|.++++ |.+|.
T Consensus 180 --~~T~lv~I~~Vnn~~gv~~P----v~EI~~icr~~~v~v~~DaAQa-vG~-----i~vDV~eln~D~~s~s~HK~ygp 247 (428)
T KOG1549|consen 180 --SKTRLVSIMHVNNEIGVLQP----VKEIVKICREEGVQVHVDAAQA-VGK-----IPVDVQELNADFLSISAHKIYGP 247 (428)
T ss_pred --CCceEEEEEecccCcccccc----HHHHHHHhCcCCcEEEeehhhh-cCC-----ccccHHHcCchheeeecccccCC
Confidence 58999999999999999999 9999999999999999999997 432 2357777888988876 88875
Q ss_pred -ccceEEEEeCHHHHHhhc--cc---------ccccCCCCcHHHHHHHHHHHHhhchh--hHHHHHHHHHHHHHHHHHHH
Q 011777 326 -GLPLGAVVTTPEIANVMA--QK---------IQFNTFGGNPVCSAGGLAVLRVIDKE--RRQAHCADVGSHLLGRLRTL 391 (477)
Q Consensus 326 -G~pig~v~~~~~~~~~~~--~~---------~~~~t~~~~~~~~aaa~a~l~~l~~~--~~~~~~~~~~~~l~~~L~~l 391 (477)
| +|++.+++.. ..+. .. ...+|- +...+...-++.+....+ ....++.++...+..++..-
T Consensus 248 ~~--iGaLYvr~~~-~~~~~~p~~~GGgq~r~~rsGT~--~~~~~~~~gsA~e~~~~~~~~~~~~~~~~~~~ll~~i~~~ 322 (428)
T KOG1549|consen 248 PG--IGALYVRRKR-PRLRVEPPLSGGGQERGLRSGTV--ATPLAVGLGSAAEFVNKEMAYDEAIIKRLSEKLLMGIGQS 322 (428)
T ss_pred Cc--ceEEEEccCC-CcccccCcccCCccccccccCCc--CchhhhhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHhhh
Confidence 4 9999998611 1111 11 111221 233333334445544332 22333444444444444321
Q ss_pred HH---hCCCceeeeccceeEEEEEeeCCC-CCC---------ccHHHH-HHHHHHHHHcCceeeccCCCCCEEEEeCCCC
Q 011777 392 QE---RHDIIGDVRGRGLMVGMELVTDRK-EKT---------PAKAET-AVLFEKLRELGVLVGKGGLHGNVFRIKPPMC 457 (477)
Q Consensus 392 ~~---~~~~~~~v~g~g~~~~i~~~~~~~-~~~---------~~~~~~-~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~ 457 (477)
.. .++......+....+.+..+.... .+. +..... .+....++..|+-.. ...+.+||+....
T Consensus 323 ~~~~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~s~~a~~~~~~epsy~l~~~G~~~~---~~~~~iRis~G~y 399 (428)
T KOG1549|consen 323 LPEVTLNGSGKSRYPGLVSLSFPYVEGESLLMDLKDVALSSGSACTSASLEPSYVLRAIGVDED---LAHSSIRISIGRY 399 (428)
T ss_pred CchhhccCCcccccccceeeecccccCcchhhhhhhhhhcccchhhcCCCCcchhhhhcCcchh---hhcceeEEeeeee
Confidence 10 011111111112222222111100 000 000000 122234455555222 2357899999999
Q ss_pred CcHHHHHHHHHHHHHHHhh
Q 011777 458 FTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 458 ~t~e~i~~~l~~l~~~l~~ 476 (477)
.+++|++++++.+.+..+.
T Consensus 400 ~t~~di~~~~~~i~~~v~~ 418 (428)
T KOG1549|consen 400 TTEEDIDYLVDAIKKLVSL 418 (428)
T ss_pred CcHHHHHHHHHHHHHHHHh
Confidence 9999999999999887653
No 263
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.74 E-value=1.8e-15 Score=156.00 Aligned_cols=329 Identities=16% Similarity=0.081 Sum_probs=187.7
Q ss_pred CCHHHHHHHHHHHhhc---cccccccC--ChH---HHH-HHHHHHhhCCCCCCEEEEe---CChHHHHHHHHHHHHhccC
Q 011777 113 CHPDVLNAIFEQSKLL---QHATTIYL--HHA---IAD-FAEALASKMPGNLKVVYFV---NSGTEANELAMLMARLSTG 180 (477)
Q Consensus 113 ~~p~v~~Av~~~l~~~---~~~~~~~~--~~~---~~~-l~~~La~~~~~~~~~v~~~---~sGseA~~~Al~~ar~~~~ 180 (477)
.+|.+.+++...+.+. .+....+. ... .++ .++++++.++.+.+.+.|+ +||++||.++++... .+
T Consensus 46 ~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf~a~~~~~~~~~~~~sgt~an~~v~~al~--~~ 123 (452)
T PTZ00094 46 TSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAFGLDPEEWGVNVQPYSGSPANFAVYTALL--QP 123 (452)
T ss_pred CCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHhCCCcccceeecCCCchHHHHHHHHHHhc--CC
Confidence 5799999988877542 12112211 122 232 4557888887766666677 799999999887652 24
Q ss_pred CceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEeccc
Q 011777 181 NLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETI 260 (477)
Q Consensus 181 ~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi 260 (477)
++.|++. ..-||........... .........+...+++....+..+ .++++++++.. +.+.|++.
T Consensus 124 gd~Ii~~-~~ehg~~l~~~~~l~~--~~~~~~~~~~~~~~~~~~~~g~id------~~~L~~~l~~~---~~~lvi~~-- 189 (452)
T PTZ00094 124 HDRIMGL-DLPSGGHLTHGFYTAK--KKVSATSIYFESLPYQVNEKGLID------YDKLEELAKAF---RPKLIIAG-- 189 (452)
T ss_pred CCEEEec-ccccCCcccccccccc--cccccceeeeeeeecccCCCCCcC------HHHHHHHHHHh---CCCEEEEe--
Confidence 5666664 4445543332110000 000000001222221111111111 57888888622 23345552
Q ss_pred CCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCcceeeec--ccccCccceEEEEeCHHH
Q 011777 261 QGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMA--KGIGNGLPLGAVVTTPEI 338 (477)
Q Consensus 261 ~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~s--K~lg~G~pig~v~~~~~~ 338 (477)
.+..|...+ +++|.++|+++|+++++|++|+ +|..+...+..... ..|++++| |+++|.. -|++++++++
T Consensus 190 ~s~~g~~~d----i~~I~~i~~~~ga~l~vDaaq~-~G~i~~~~~~~~~~--~~D~l~~S~hK~l~GP~-Gg~l~~~~~~ 261 (452)
T PTZ00094 190 ASAYPRDID----YKRFREICDSVGAYLMADIAHT-SGLVAAGVLPSPFP--YADVVTTTTHKSLRGPR-SGLIFYRKKV 261 (452)
T ss_pred CCCCCCccC----HHHHHHHHHHcCCEEEEeccch-hccccCCCCCCCCC--CCcEEEcCCccCCCCCC-ceEEEEeccc
Confidence 234666666 9999999999999999999997 65543122211111 46887655 9997633 2777777665
Q ss_pred HHhhcccc---cccCC--CCcHHHHHHHHHHHHhhch---hhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEE
Q 011777 339 ANVMAQKI---QFNTF--GGNPVCSAGGLAVLRVIDK---ERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGM 410 (477)
Q Consensus 339 ~~~~~~~~---~~~t~--~~~~~~~aaa~a~l~~l~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i 410 (477)
.+.+.... ...+| +.++...++..++++.+.. ++..+++.++.+++.+.|.+. ...+..... ......+
T Consensus 262 ~~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~--g~~v~~~~~-~~~~~~v 338 (452)
T PTZ00094 262 KPDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKR--GYDLVTGGT-DNHLVLV 338 (452)
T ss_pred chHHHHhhccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhC--CcEEecCCC-CCceEee
Confidence 43322111 11112 3466777777788888743 346778888888888887663 222211100 1122333
Q ss_pred EEeeCCCCCCccHHHHHHHHHHHHHcCceeeccC-------CCCCEEEEeCCCCCc----HHHHHHHHHHHHHHHh
Q 011777 411 ELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGG-------LHGNVFRIKPPMCFT----KDDADFLVDALDYSMS 475 (477)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~-------~~~~~iRi~p~~~~t----~e~i~~~l~~l~~~l~ 475 (477)
.+... ......+...|.++||.+...+ ...+.+|++++..++ ++||+++++.|.+++.
T Consensus 339 ~~~~~-------~~~~~~~~~~L~~~gI~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~~l~~~l~~~~~ 407 (452)
T PTZ00094 339 DLRPF-------GITGSKMEKLLDAVNISVNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFKFVADFLDRAVK 407 (452)
T ss_pred cCCcC-------CCCHHHHHHHHHHCCcEEecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 33211 1123467777777899995321 123689999977766 9999999999998875
No 264
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.74 E-value=4.7e-16 Score=157.06 Aligned_cols=289 Identities=18% Similarity=0.176 Sum_probs=177.6
Q ss_pred ccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCC
Q 011777 132 TTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPI 211 (477)
Q Consensus 132 ~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~ 211 (477)
..+|.++...+|+++|+++.+. +..++++||+.|+..++.... .+++.||+..+.|.+. ..........
T Consensus 55 y~r~~~pt~~~Le~~lA~l~G~--~~al~~~sG~~Ai~~~l~al~--~~Gd~Vv~~~~~y~~~-~~~~~~~~~~------ 123 (386)
T PRK06767 55 YSRLGNPTVKLFEERMAVLEGG--EEALAFGSGMAAISATLIGFL--KAGDHIICSNGLYGCT-YGFLEVLEEK------ 123 (386)
T ss_pred ccCCCCcchHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHHh--CCCCEEEEcCCcHHHH-HHHHHHHHhh------
Confidence 4456778889999999999864 457788999999988876442 3567788777665433 2222111100
Q ss_pred CCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEc
Q 011777 212 PQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIAD 291 (477)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~D 291 (477)
.++.....+. . | .+++++++. +++++|++|..+|++|.+.+ +++|.++|+++|+++|+|
T Consensus 124 --~gi~~~~~~~------~-d----~~~l~~~i~----~~tklV~lesp~NptG~v~d----l~~I~~la~~~g~~vivD 182 (386)
T PRK06767 124 --FMITHSFCDM------E-T----EADIENKIR----PNTKLIFVETPINPTMKLID----LKQVIRVAKRNGLLVIVD 182 (386)
T ss_pred --cCeEEEEeCC------C-C----HHHHHHhhC----cCceEEEEeCCCCCCceecC----HHHHHHHHHHcCCEEEEE
Confidence 1221111100 0 1 467777775 36788888888888887776 899999999999999999
Q ss_pred CcccCccCCCCCCccccccCCCccee--eecccccC-ccce-EEEEeCHHHHHhhcccccccC-CCCcHHHHHHHHHHHH
Q 011777 292 EVQTGFGRTGSHYWGFETQGVIPDIV--TMAKGIGN-GLPL-GAVVTTPEIANVMAQKIQFNT-FGGNPVCSAGGLAVLR 366 (477)
Q Consensus 292 Ev~~gfgr~G~~~~~~~~~gv~pDiv--t~sK~lg~-G~pi-g~v~~~~~~~~~~~~~~~~~t-~~~~~~~~aaa~a~l~ 366 (477)
|+|+. +..+ .. . ..| .|++ +++|.+++ |.++ |+++++++.++.+........ -..+|+.+++++..|+
T Consensus 183 ~a~a~-~~~~-~p--l-~~g--~Div~~S~sK~l~g~g~~~gG~v~~~~~~i~~~~~~~~~~~g~~~~~~~a~l~~~~L~ 255 (386)
T PRK06767 183 NTFCS-PYLQ-RP--L-ELG--CDAVVHSATKYIGGHGDVVAGVTICKTRALAEKIRPMRKDIGGIMAPFDAWLLLRGLK 255 (386)
T ss_pred CCCcc-cccC-Cc--h-hcC--CcEEEecCcceecCCCCceeEEEEeChHHHHHHHHHHHHHhCCCCCHHHHHHHHcCCC
Confidence 99852 2222 11 1 123 3655 56799987 7775 889999887765432211111 1125666665555554
Q ss_pred hhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceee------------eccceeEEEEEeeCCCCCCccHHHHHHHHHHHH
Q 011777 367 VIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDV------------RGRGLMVGMELVTDRKEKTPAKAETAVLFEKLR 434 (477)
Q Consensus 367 ~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v------------~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~ 434 (477)
.+ +...++.+++..++.+.|++ ++.+..+ ++.|.++.+++.. ......++.+.|.
T Consensus 256 tl--~~r~~~~~~~a~~la~~L~~----~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~-------~~~~~~~f~~~l~ 322 (386)
T PRK06767 256 TL--AVRMDRHCDNAEKIVSFLKN----HDAVEGVWYPEGELASRQMKRGGGVISFSIKG-------GKEETQAFINDLH 322 (386)
T ss_pred cH--HHHHHHHHHHHHHHHHHHHc----CCCccEEECCCcHHHHHhCCCCCceEEEEEcC-------CHHHHHHHHHhCC
Confidence 33 23445666666666666654 3433322 3557788888732 1233567788877
Q ss_pred HcCceeeccC-------------------------CCCCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 435 ELGVLVGKGG-------------------------LHGNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 435 ~~Gv~v~~~~-------------------------~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
..++.+.-|+ ...+.+||+..+ ||.+.+++-|++++.+
T Consensus 323 ~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGl----E~~~dl~~dl~~al~~ 385 (386)
T PRK06767 323 FITIAVSLGDTETLIQHPATMTHAAIPAELRQEMGIYDNLIRLSVGL----ESWEDIVSDLEQALKK 385 (386)
T ss_pred ccEEecCCCCcCccccCCCccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHhh
Confidence 6665544331 113578997665 4566667777776654
No 265
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.73 E-value=4.3e-16 Score=157.00 Aligned_cols=241 Identities=16% Similarity=0.159 Sum_probs=149.7
Q ss_pred ccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCC
Q 011777 132 TTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPI 211 (477)
Q Consensus 132 ~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~ 211 (477)
..+|.++...+|+++|+++.+. +.+++++||++|+.++++.... ++++||+..+. ||.+........
T Consensus 48 y~r~~~p~~~~le~~la~l~g~--~~~~~~~sG~~Ai~~al~al~~--~Gd~Vl~~~~~-~~~t~~~~~~~~-------- 114 (380)
T TIGR01325 48 YSRYANPTVAAFEERIAALEGA--ERAVATATGMSAIQAALMTLLQ--AGDHVVASRSL-FGSTVGFISEIL-------- 114 (380)
T ss_pred eecCCCchHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHHhC--CCCEEEEecCC-cchHHHHHHHHH--------
Confidence 4567788899999999999854 5788999999999999975532 45677776554 444322211100
Q ss_pred CCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEc
Q 011777 212 PQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIAD 291 (477)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~D 291 (477)
...|+....++. + | .++++++++ +++++|++|.++++.|.+.+ +++|.++|+++|+++|+|
T Consensus 115 ~~~g~~v~~v~~------~-d----~~~l~~~i~----~~tklV~le~p~np~g~~~d----l~~I~~la~~~gi~livD 175 (380)
T TIGR01325 115 PRFGIEVSFVDP------T-D----LNAWEAAVK----PNTKLVFVETPSNPLGELVD----IAALAELAHAIGALLVVD 175 (380)
T ss_pred HHhCCEEEEECC------C-C----HHHHHHhcC----CCceEEEEECCCCCCCeeeC----HHHHHHHHHHcCCEEEEE
Confidence 001222211111 0 1 366777664 36789999988888887776 999999999999999999
Q ss_pred CcccCccCCCCCCccccccCCCcceee--ecccccC-ccce-EEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHh
Q 011777 292 EVQTGFGRTGSHYWGFETQGVIPDIVT--MAKGIGN-GLPL-GAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRV 367 (477)
Q Consensus 292 Ev~~gfgr~G~~~~~~~~~gv~pDivt--~sK~lg~-G~pi-g~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~ 367 (477)
|+|+.+. .. .. ....+|+++ ++|.++| |.++ |++++++++++.+...........+|..+..++..++.
T Consensus 176 ~a~~~~~-~~-~p-----l~~g~Divv~S~sK~l~g~g~~~gG~vv~~~~~~~~l~~~~~~~g~~~~p~~a~~~l~~l~t 248 (380)
T TIGR01325 176 NVFATPV-LQ-QP-----LKLGADVVVYSATKHIDGQGRVMGGVIAGSEELMAEVAVYLRHTGPAMSPFNAWVLLKGLET 248 (380)
T ss_pred CCCcccc-cC-Cc-----hhhCCCEEEeeccceecCCCCeEEEEEEeCHHHHHHHHHHHHhhCCCCCHHHHHHHHhccCc
Confidence 9987321 11 11 123467774 7899997 6666 77888888877766432212222345655555555554
Q ss_pred hchhhHHHHHHHHHHHHHHHHHHHH--H--hCCCce----------eeeccceeEEEEEe
Q 011777 368 IDKERRQAHCADVGSHLLGRLRTLQ--E--RHDIIG----------DVRGRGLMVGMELV 413 (477)
Q Consensus 368 l~~~~~~~~~~~~~~~l~~~L~~l~--~--~~~~~~----------~v~g~g~~~~i~~~ 413 (477)
+.. ..++..++..++.+.|++.. . .||... ...|.|.|+.+++.
T Consensus 249 l~~--r~~~~~~~a~~la~~L~~~p~v~~V~yp~l~s~~~~~~~~~~~~g~g~~~s~~l~ 306 (380)
T TIGR01325 249 LSL--RMQKQFDSALAIAEWLQAQPQVQAVYYPGLPDHPQHELARRQQSGGGTVIGFDVA 306 (380)
T ss_pred HHH--HHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEC
Confidence 432 34555556666666655421 0 022111 12466888888884
No 266
>PRK06460 hypothetical protein; Provisional
Probab=99.71 E-value=2.2e-15 Score=151.53 Aligned_cols=295 Identities=12% Similarity=0.108 Sum_probs=171.3
Q ss_pred ccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCC
Q 011777 130 HATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKY 209 (477)
Q Consensus 130 ~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~ 209 (477)
+..++..++...+|+++|+++.+.. ..+.++||++|+..++.... .++++|++..+.|.+..........
T Consensus 37 ~~y~r~~~p~~~~L~~~lA~l~g~~--~~v~~~sG~~ai~~~l~al~--~~Gd~Vl~~~~~~~~ty~~~~~~~~------ 106 (376)
T PRK06460 37 YRYSREANPTVLELTKKIVELENAE--MGVAFSSGMGAISTTALALL--KPGNSVLVHRDMFGRSYRFFTDYLK------ 106 (376)
T ss_pred cceeCCCCccHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHHh--CCCCEEEEecCCcCcHHHHHHHHHH------
Confidence 3345566788899999999998663 34455888999998887542 2557788876555332111100000
Q ss_pred CCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEE
Q 011777 210 PIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCI 289 (477)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI 289 (477)
..|+.....+ .+ + .+.++++++ +++++|+++.++|++|.+.+ +++|.++|++||+++|
T Consensus 107 ---~~G~~v~~~~------~~-~----~~~l~~~~~----~~tklV~l~sp~NPtG~v~d----~~~I~~la~~~g~~vi 164 (376)
T PRK06460 107 ---NWGVNVDASN------PG-S----DNIIEKAKS----KRYDVVFVENITNPLLRVVD----ITELSKVCKENGSILI 164 (376)
T ss_pred ---hhCcEEEEEC------CC-C----HHHHHHhcC----CCceEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEE
Confidence 0122222111 11 1 123444332 46788889988888887777 7899999999999999
Q ss_pred EcCcccCccCCCCCCccccccCCCccee--eecccccC--ccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHH
Q 011777 290 ADEVQTGFGRTGSHYWGFETQGVIPDIV--TMAKGIGN--GLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVL 365 (477)
Q Consensus 290 ~DEv~~gfgr~G~~~~~~~~~gv~pDiv--t~sK~lg~--G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l 365 (477)
+||+|..+ ... . .. ..+ .|++ ++||.++| +.++|++++++++++.+.......+.+.++..+..++..+
T Consensus 165 vDea~~~~-~~~-~--~l-~~~--~divv~S~sK~l~G~~~~~~G~~~~~~~l~~~l~~~~~~~g~~~~~~~a~~~l~~~ 237 (376)
T PRK06460 165 VDATFSTP-INQ-K--PL-ELG--ADIVVHSASKFLAGHNDVIAGLAAGYGKLLNVIDQMRRTLGTSLDPHAAYLTLRGI 237 (376)
T ss_pred EECCcCcc-ccC-C--hh-hcC--CCEEEeecceeccCCCCceEEEEecCHHHHHHHHHHHHhcCCCCCHHHHHHHHhch
Confidence 99998632 111 1 11 123 3555 68899975 3679999999999888765433333344555444444444
Q ss_pred HhhchhhHHHHHHHHHHHHHHHHHHHHH----hCCCce----------eeeccceeEEEEEeeCCCCCCccHHHHHHHHH
Q 011777 366 RVIDKERRQAHCADVGSHLLGRLRTLQE----RHDIIG----------DVRGRGLMVGMELVTDRKEKTPAKAETAVLFE 431 (477)
Q Consensus 366 ~~l~~~~~~~~~~~~~~~l~~~L~~l~~----~~~~~~----------~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~ 431 (477)
+.+ +...+++.++.+++.+.|++... .||... ...|.|.|+.+++..+ ......+.+
T Consensus 238 ~~l--~~r~~~~~~n~~~l~~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~s~~~~~~-------~~~~~~~~~ 308 (376)
T PRK06460 238 KTL--KIRMDVINRNAEQIAEFLEGHPKVVKVYYPGLKSHVDYEIARRVLKGFGGVLSFEVNGG-------QESALKVMK 308 (376)
T ss_pred hhH--HHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCc-------HHHHHHHHH
Confidence 433 23456667777777777664310 011111 1246788888888421 122344554
Q ss_pred HHHH--cCc--------eeecc---------------CCCCCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 432 KLRE--LGV--------LVGKG---------------GLHGNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 432 ~l~~--~Gv--------~v~~~---------------~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
.|.= .+. +..|. |...+.|||+..+ ||.+.+++-|++++.+
T Consensus 309 ~l~~~~~~~s~Gg~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~~ 374 (376)
T PRK06460 309 SLKLIIPAQTLGGVNSVISHPATMSHRTLSLEERKIVGITDSLLRLSVGI----EDVNDLIEDLDRALST 374 (376)
T ss_pred hCCcceeccCCCCCceEEeCccccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHHh
Confidence 4421 111 11111 1234689997765 4566667777776654
No 267
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.71 E-value=3.4e-15 Score=149.65 Aligned_cols=280 Identities=18% Similarity=0.091 Sum_probs=170.4
Q ss_pred ccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCC
Q 011777 132 TTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPI 211 (477)
Q Consensus 132 ~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~ 211 (477)
..+|.++...+|+++|+++. + +.+++++||++|+..++... ..++++||+..++|++..........
T Consensus 45 y~ry~~p~~~~Le~~lA~l~--~-~~~v~~~sG~~Ai~~~l~al--l~~Gd~Vl~~~~~y~~~~~~~~~~l~-------- 111 (366)
T PRK07582 45 YGRASNPTWRALEAALGELE--G-AEALVFPSGMAAITAVLRAL--LRPGDTVVVPADGYYQVRALAREYLA-------- 111 (366)
T ss_pred eECCCCccHHHHHHHHHHHc--C-CCEEEECCHHHHHHHHHHHh--cCCCCEEEEeCCCcHhHHHHHHHHHh--------
Confidence 45677888999999999998 3 45677889999999888654 34568899999999876443211100
Q ss_pred CCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEc
Q 011777 212 PQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIAD 291 (477)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~D 291 (477)
..|+....++. ++ +.+. +. +++++|++|..+|++|.+.+ +++|.++|+++|+++|+|
T Consensus 112 -~~G~~v~~v~~------~~-------~~~~-~~----~~t~lV~le~p~NPtg~v~d----i~~I~~~a~~~g~~lvVD 168 (366)
T PRK07582 112 -PLGVTVREAPT------AG-------MAEA-AL----AGADLVLAETPSNPGLDVCD----LAALAAAAHAAGALLVVD 168 (366)
T ss_pred -cCeEEEEEECC------CC-------hHHH-hc----cCceEEEEECCCCCCCCccC----HHHHHHHHHHcCCEEEEE
Confidence 01333322221 10 1111 11 35678888887777776655 999999999999999999
Q ss_pred CcccCccCCCCCCccccccCCCccee--eecccccC--ccceEEEEeC-HHHHHhhcccccccCCCCcHHHHHHHHHHHH
Q 011777 292 EVQTGFGRTGSHYWGFETQGVIPDIV--TMAKGIGN--GLPLGAVVTT-PEIANVMAQKIQFNTFGGNPVCSAGGLAVLR 366 (477)
Q Consensus 292 Ev~~gfgr~G~~~~~~~~~gv~pDiv--t~sK~lg~--G~pig~v~~~-~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~ 366 (477)
|+|... .|... ++ ...|++ +++|.++| |+++||++++ +++.+.+...........+|+.+..++..|+
T Consensus 169 ~t~~~~--~~~~p--~~---~g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~a~l~~r~l~ 241 (366)
T PRK07582 169 NTTATP--LGQRP--LE---LGADLVVASDTKALTGHSDLLLGYVAGRDPELMAAVERWRLLAGAIPGPFEAWLAHRSLG 241 (366)
T ss_pred CCCCCc--cccCc--hh---cCCcEEEecccccccCCCCeeEEEEEcCcHHHHHHHHHHHHHhCCCCCHHHHHHHHhccc
Confidence 998521 12111 12 234666 57899976 6899999984 7777766543322233456777766666665
Q ss_pred hhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceee------------------eccceeEEEEEeeCCCCCCccHHHHHH
Q 011777 367 VIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDV------------------RGRGLMVGMELVTDRKEKTPAKAETAV 428 (477)
Q Consensus 367 ~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v------------------~g~g~~~~i~~~~~~~~~~~~~~~~~~ 428 (477)
.+ +-..++..++...+.+.|++. +.+..| .+.|.++.+++. + ..+
T Consensus 242 tl--~~R~~~~~~na~~la~~L~~~----p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~-~----------~~~ 304 (366)
T PRK07582 242 TL--GLRFARQCANALAVAELLAGH----PAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELA-D----------AAA 304 (366)
T ss_pred cH--HHHHHHHHHHHHHHHHHHHhC----CCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeC-C----------HHH
Confidence 33 233456666777776666643 322211 246778888873 1 122
Q ss_pred HHHHHHHcCceee---ccC--------------CCCCEEEEeCCCCCcHHHHHHHHHHHH
Q 011777 429 LFEKLRELGVLVG---KGG--------------LHGNVFRIKPPMCFTKDDADFLVDALD 471 (477)
Q Consensus 429 ~~~~l~~~Gv~v~---~~~--------------~~~~~iRi~p~~~~t~e~i~~~l~~l~ 471 (477)
..+.+.+.+++.. -|+ ..++.||++..+...++.|+.+.++|+
T Consensus 305 ~~~~~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~liR~svGlE~~~dli~dl~~al~ 364 (366)
T PRK07582 305 AERFVAASRLVVAATSFGGVHTSADRRARWGDAVPEGFVRLSCGIEDTDDLVADLERALD 364 (366)
T ss_pred HHHHHHhCCcceecccCCCccchhhhHHHcCCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Confidence 3334444444432 010 123679999888766555555555443
No 268
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.71 E-value=1.8e-15 Score=152.89 Aligned_cols=288 Identities=16% Similarity=0.141 Sum_probs=169.7
Q ss_pred ccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCC
Q 011777 132 TTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPI 211 (477)
Q Consensus 132 ~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~ 211 (477)
..++.++...+++++|+++.+. +.+++++||++|+..++.... .+++.||+....|.+.........
T Consensus 55 y~r~~~p~~~~le~~la~l~g~--~~~v~~ssG~~Ai~~al~al~--~~Gd~Vi~~~~~y~~t~~~~~~~~--------- 121 (390)
T PRK08133 55 YSRFTNPTVTMFQERLAALEGA--EACVATASGMAAILAVVMALL--QAGDHVVSSRSLFGSTVSLFEKIF--------- 121 (390)
T ss_pred eECCCChHHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHHh--CCCCEEEEccCcchhHHHHHHHHH---------
Confidence 4456788899999999999865 568899999999999987553 356778887766654322111000
Q ss_pred CCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEc
Q 011777 212 PQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIAD 291 (477)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~D 291 (477)
...|+....++. + | .++++++++ +++++|++|.++++.|.+.+ +++|.++|++||+++|+|
T Consensus 122 ~~~G~~v~~vd~------~-d----~~~l~~~i~----~~tklV~ie~p~NptG~v~d----l~~I~~la~~~gi~livD 182 (390)
T PRK08133 122 ARFGIETTFVDL------T-D----LDAWRAAVR----PNTKLFFLETPSNPLTELAD----IAALAEIAHAAGALLVVD 182 (390)
T ss_pred HHcCcEEEEECC------C-C----HHHHHHhcC----cCCeEEEEECCCCCCCCcCC----HHHHHHHHHHcCCEEEEE
Confidence 001222222111 1 1 467777775 46789999888888887776 899999999999999999
Q ss_pred CcccCccCCCCCCccccccCCCccee--eecccccC-ccce-EEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHh
Q 011777 292 EVQTGFGRTGSHYWGFETQGVIPDIV--TMAKGIGN-GLPL-GAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRV 367 (477)
Q Consensus 292 Ev~~gfgr~G~~~~~~~~~gv~pDiv--t~sK~lg~-G~pi-g~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~ 367 (477)
+++... ... .. . ..| .|++ +++|.+++ |.++ |++++++++++.+...........++..+..++..++.
T Consensus 183 ~t~~~~-~~~-~p--l-~~g--~Divv~S~sK~~~g~g~~~GG~vv~~~~~~~~~~~~~~~~g~~~~~~~a~~~l~gl~t 255 (390)
T PRK08133 183 NCFCTP-ALQ-QP--L-KLG--ADVVIHSATKYLDGQGRVLGGAVVGSKELMEEVFGFLRTAGPTLSPFNAWVFLKGLET 255 (390)
T ss_pred CCCccc-ccC-Cc--h-hhC--CcEEEeecceeecCCcceEeEEEEcCHHHHHHHHHHHHHhCCCCCHHHHHHHHcccch
Confidence 998522 111 11 1 123 4655 57799986 7787 56777887766554322222233455555554444432
Q ss_pred hchhhHHHHHHHHHHHHHHHHHHHHHhCCCce------------------eeeccceeEEEEEeeCCCCCCccHHHHHHH
Q 011777 368 IDKERRQAHCADVGSHLLGRLRTLQERHDIIG------------------DVRGRGLMVGMELVTDRKEKTPAKAETAVL 429 (477)
Q Consensus 368 l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~------------------~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~ 429 (477)
+. ...++..++...+.+.|++ ++.+. ...|.|.|+.|++..+ .....++
T Consensus 256 l~--~R~~~~~~~a~~la~~L~~----~p~v~~v~yp~l~~~p~~~~~~~~~~g~g~~~s~~l~~~-------~~~~~~f 322 (390)
T PRK08133 256 LS--LRMEAHSANALALAEWLEA----HPGVERVFYPGLPSHPQHELAKRQQKGGGAIVSFEVKGG-------REAAWRV 322 (390)
T ss_pred HH--HHHHHHHHHHHHHHHHHHh----CCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCC-------HHHHHHH
Confidence 21 2233334444455555443 33221 1246688888888421 1223445
Q ss_pred HHHHHH--cCcee--------ecc---------------CCCCCEEEEeCCCCCcHHHHHHHHHHHHHHHh
Q 011777 430 FEKLRE--LGVLV--------GKG---------------GLHGNVFRIKPPMCFTKDDADFLVDALDYSMS 475 (477)
Q Consensus 430 ~~~l~~--~Gv~v--------~~~---------------~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~ 475 (477)
.+.|.= .++-. .|. |...+.|||+..+ |+.+.+++-|+++|+
T Consensus 323 ~~~l~l~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~ 389 (390)
T PRK08133 323 IDATRLISITANLGDTKTTITHPATTTHGRLSPEARAAAGITEGLIRVAVGL----EDVADIKADLARGLA 389 (390)
T ss_pred HHhCCcceEeccCCCcceeeecCCCCCcccCCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHHhh
Confidence 544431 11111 111 1124689997665 456667777777764
No 269
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.71 E-value=4.7e-15 Score=148.77 Aligned_cols=239 Identities=17% Similarity=0.103 Sum_probs=149.9
Q ss_pred ccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCC
Q 011777 130 HATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKY 209 (477)
Q Consensus 130 ~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~ 209 (477)
+...++.++...+|+++|+++.+. +..++++||++|+..++.+ ..++++||+..+.|++..........
T Consensus 44 ~~y~r~~~pt~~~le~~la~l~g~--~~~~~~~sG~~ai~~~~~l---l~~Gd~Vl~~~~~y~~t~~~~~~~~~------ 112 (366)
T PRK08247 44 FDYSRTGNPTRGVLEQAIADLEGG--DQGFACSSGMAAIQLVMSL---FRSGDELIVSSDLYGGTYRLFEEHWK------ 112 (366)
T ss_pred ccccCCCCchHHHHHHHHHHHhCC--CcEEEEcCHHHHHHHHHHH---hCCCCEEEEecCCcCcHHHHHHHHhh------
Confidence 334567889999999999999865 4468899999999977642 23567899999999874322211100
Q ss_pred CCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEE
Q 011777 210 PIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCI 289 (477)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI 289 (477)
..|+.....+. . | .++++++++ +++++|++|..+|+.|. ...+++|.++|++||+++|
T Consensus 113 ---~~G~~v~~vd~------~-d----~~~l~~~i~----~~tklv~le~P~NP~~~----~~dl~~I~~la~~~g~~lI 170 (366)
T PRK08247 113 ---KWNVRFVYVNT------A-S----LKAIEQAIT----PNTKAIFIETPTNPLMQ----ETDIAAIAKIAKKHGLLLI 170 (366)
T ss_pred ---ccCceEEEECC------C-C----HHHHHHhcc----cCceEEEEECCCCCCCc----HHHHHHHHHHHHHcCCEEE
Confidence 01222222111 0 1 467777775 35778888776666553 3449999999999999999
Q ss_pred EcCcccCccCCCCCCccccccCCCcceeeecccccC--ccceEEEEeC-HHHHHhhcccccccCCCCcHHHHHHHHHHHH
Q 011777 290 ADEVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIGN--GLPLGAVVTT-PEIANVMAQKIQFNTFGGNPVCSAGGLAVLR 366 (477)
Q Consensus 290 ~DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg~--G~pig~v~~~-~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~ 366 (477)
+||+|... ..+ .. .+ .+...-+.++||.++| ++..|+++++ +++.+.+.......+...+|+.+..++..++
T Consensus 171 vD~t~~~~-~~~-~p--~~-~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~~l~ 245 (366)
T PRK08247 171 VDNTFYTP-VLQ-RP--LE-EGADIVIHSATKYLGGHNDVLAGLVVAKGQELCERLAYYQNAAGAVLSPFDSWLLIRGMK 245 (366)
T ss_pred EECCCccc-ccc-Cc--hh-cCCcEEEeecceeccCCCceeeeEEecChHHHHHHHHHHHHhcCCCCChHHHHHHHhccC
Confidence 99998411 111 11 11 2332223368899996 4788999987 6677766543333444566777777666665
Q ss_pred hhchhhHHHHHHHHHHHHHHHHHHHHHhCCCcee--eeccceeEEEEE
Q 011777 367 VIDKERRQAHCADVGSHLLGRLRTLQERHDIIGD--VRGRGLMVGMEL 412 (477)
Q Consensus 367 ~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~--v~g~g~~~~i~~ 412 (477)
.+. ...++.+++.+.+.+.|+ +++.+.. .++.|.|+.+++
T Consensus 246 tl~--~r~~~~~~~a~~l~~~L~----~~p~v~~v~~P~~gg~~sf~~ 287 (366)
T PRK08247 246 TLA--LRMRQHEENAKAIAAFLN----EQPGVTDVLYPGRGGMLSFRL 287 (366)
T ss_pred cHH--HHHHHHHHHHHHHHHHHH----hCCCeeEEecCCcCcEEEEEE
Confidence 332 233344555555555554 4554443 445688888876
No 270
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.70 E-value=5.9e-15 Score=149.23 Aligned_cols=239 Identities=14% Similarity=0.137 Sum_probs=157.0
Q ss_pred ccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCC
Q 011777 130 HATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKY 209 (477)
Q Consensus 130 ~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~ 209 (477)
+..+++.++...+|+++|+++.+. +.+++++||++|+..++.... .+++.||+..+.|++.........
T Consensus 56 ~~y~r~~~p~~~~le~~lA~l~g~--~~~i~~ssG~~Ai~~~l~all--~~GD~Vi~~~~~y~~~~~~~~~~~------- 124 (398)
T PRK08249 56 HIYSRNTNPTVQAFEEKVRILEGA--EAATAFSTGMAAISNTLYTFL--KPGDRVVSIKDTYGGTNKIFTEFL------- 124 (398)
T ss_pred ccccCCCChHHHHHHHHHHHHhCC--CeEEEeCChHHHHHHHHHHhc--CCCCEEEEcCCchHHHHHHHHHHH-------
Confidence 444567788999999999999864 567889999999999887543 356789999999876422111100
Q ss_pred CCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEE
Q 011777 210 PIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCI 289 (477)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI 289 (477)
...|+.....+. . | .++++++++ +++++|++|.+++++|.+.+ +++|.++|++||+++|
T Consensus 125 --~~~Gi~v~~vd~-----~--d----~e~l~~~i~----~~tklV~ie~p~NPtg~v~d----l~~I~~la~~~gi~li 183 (398)
T PRK08249 125 --PRMGVDVTLCET-----G--D----HEQIEAEIA----KGCDLLYLETPTNPTLKIVD----IERLAAAAKKVGALVV 183 (398)
T ss_pred --hhCCeEEEEcCC-----C--C----HHHHHHhcC----CCCeEEEEECCCCCCCccCC----HHHHHHHHHHcCCEEE
Confidence 001222221111 0 1 467877775 35788988887788887776 9999999999999999
Q ss_pred EcCcccCccCCCCCCccccccCCCccee--eecccccC-ccce-EEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHH
Q 011777 290 ADEVQTGFGRTGSHYWGFETQGVIPDIV--TMAKGIGN-GLPL-GAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVL 365 (477)
Q Consensus 290 ~DEv~~gfgr~G~~~~~~~~~gv~pDiv--t~sK~lg~-G~pi-g~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l 365 (477)
+|++|..+.. . .. .....|++ +++|.+++ |..+ |++++++++++.+...........+++.++.++..+
T Consensus 184 vD~t~a~~~~-~-~~-----l~~~~Divv~S~sK~l~g~~~~~gG~vv~~~~l~~~l~~~~~~~g~~~s~~~a~l~l~~l 256 (398)
T PRK08249 184 VDNTFATPIN-Q-NP-----LALGADLVIHSATKFLSGHADALGGVVCGSKELMEQVYHYREINGATMDPMSAYLILRGM 256 (398)
T ss_pred EECCcCcccc-C-Cc-----hhhCCCEEeccCceecCCCCCceEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHhCc
Confidence 9999874321 1 11 12234555 57899986 5555 677788888887765444344556787777777777
Q ss_pred HhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCce------------------eeeccceeEEEEEe
Q 011777 366 RVIDKERRQAHCADVGSHLLGRLRTLQERHDIIG------------------DVRGRGLMVGMELV 413 (477)
Q Consensus 366 ~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~------------------~v~g~g~~~~i~~~ 413 (477)
+.+. ...++..++.+.+.+.|++ ++.+. ...|.|.++.+++.
T Consensus 257 ~tL~--~R~~~~~~na~~la~~L~~----~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~sf~~~ 316 (398)
T PRK08249 257 KTLK--LRVRQQQESAMALAKYLQT----HPKVEAVYYPGLETHPNHEIAKAQMRGFGGILSFVLK 316 (398)
T ss_pred chHH--HHHHHHHHHHHHHHHHHHc----CCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEEc
Confidence 6552 2345555566666665553 33221 12366888888884
No 271
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.70 E-value=4.4e-15 Score=150.52 Aligned_cols=256 Identities=13% Similarity=0.067 Sum_probs=161.3
Q ss_pred ccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCC
Q 011777 130 HATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKY 209 (477)
Q Consensus 130 ~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~ 209 (477)
+.+.+|.++...+|+++|+++.+. +.+++++||++|+..++.... .+++.||+..+.|.+.........
T Consensus 56 ~~Y~r~~~p~~~~Le~~iA~~~g~--~~~l~~~sG~~Ai~~al~~ll--~~Gd~Vl~~~~~y~~~~~~~~~~~------- 124 (400)
T PRK06234 56 YIYSRLGNPTSTEVENKLALLEGG--EAAVVAASGMGAISSSLWSAL--KAGDHVVASDTLYGCTFALLNHGL------- 124 (400)
T ss_pred CcccCCCCccHHHHHHHHHHHhCC--CcEEEEcCHHHHHHHHHHHHh--CCCCEEEEecCccchHHHHHHHHH-------
Confidence 334566788899999999999864 468899999999998886443 356778887776644322211100
Q ss_pred CCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHh--CcE
Q 011777 210 PIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKA--GGV 287 (477)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~--gil 287 (477)
...|+....++. . | ++++++.++ +++++|++|.++|++|.+.+ +++|.++|+++ |++
T Consensus 125 --~~~G~~v~~vd~------~-d----~e~l~~~i~----~~tklI~iesP~NPtG~v~d----l~~I~~la~~~~~~i~ 183 (400)
T PRK06234 125 --TRYGVEVTFVDT------S-N----LEEVRNALK----ANTKVVYLETPANPTLKVTD----IKAISNIAHENNKECL 183 (400)
T ss_pred --hhCCeEEEEECC------C-C----HHHHHHHhc----cCCeEEEEECCCCCCCCcCC----HHHHHHHHHhcCCCCE
Confidence 001232222211 0 1 477888775 35788999988888887766 99999999997 999
Q ss_pred EEEcCcccCccCCCCCCccccccCCCccee--eecccccC-ccce-EEEEeCHHHHHhhccc--ccccCCCCcHHHHHHH
Q 011777 288 CIADEVQTGFGRTGSHYWGFETQGVIPDIV--TMAKGIGN-GLPL-GAVVTTPEIANVMAQK--IQFNTFGGNPVCSAGG 361 (477)
Q Consensus 288 lI~DEv~~gfgr~G~~~~~~~~~gv~pDiv--t~sK~lg~-G~pi-g~v~~~~~~~~~~~~~--~~~~t~~~~~~~~aaa 361 (477)
+|+||+|... ..+ ... +...|++ +++|.+++ |.++ |++++++++++.++.. ....+...+|+.++.+
T Consensus 184 livDea~~~~-~~~-~~l-----~~g~Divv~S~sK~l~g~g~~~gG~v~~~~~~~~~l~~~~~~~~~g~~l~p~~a~l~ 256 (400)
T PRK06234 184 VFVDNTFCTP-YIQ-RPL-----QLGADVVVHSATKYLNGHGDVIAGFVVGKEEFINQVKLFGIKDMTGSVIGPFEAFLI 256 (400)
T ss_pred EEEECCCCch-hcC-Cch-----hhCCcEEEeeccccccCCCCceeEEEEecHHHHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 9999998733 112 111 2234555 57899986 7665 8999999988877532 1122345677777777
Q ss_pred HHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCce------------------eeeccceeEEEEEeeCCCCCCccH
Q 011777 362 LAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIG------------------DVRGRGLMVGMELVTDRKEKTPAK 423 (477)
Q Consensus 362 ~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~------------------~v~g~g~~~~i~~~~~~~~~~~~~ 423 (477)
+..|+.+ +...++..++..++.+.|.+ ++.+. ...+.|.++.+++... .
T Consensus 257 ~~~l~tl--~~r~~~~~~na~~~a~~L~~----~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~~-------~ 323 (400)
T PRK06234 257 IRGMKTL--QIRMEKHCKNAMKVAKFLES----HPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKGG-------V 323 (400)
T ss_pred HhccCcH--HHHHHHHHHHHHHHHHHHHc----CCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecCc-------H
Confidence 7666543 23445555666666665543 33221 1235677888887421 1
Q ss_pred HHHHHHHHHHHHcC
Q 011777 424 AETAVLFEKLRELG 437 (477)
Q Consensus 424 ~~~~~~~~~l~~~G 437 (477)
....++.+.|.-.+
T Consensus 324 ~~~~~f~~~l~~~~ 337 (400)
T PRK06234 324 EEGKVVMNNVKLAT 337 (400)
T ss_pred HHHHHHHHhCCcce
Confidence 23456666665443
No 272
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.70 E-value=1e-14 Score=146.91 Aligned_cols=239 Identities=19% Similarity=0.143 Sum_probs=155.5
Q ss_pred ccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCC
Q 011777 130 HATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKY 209 (477)
Q Consensus 130 ~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~ 209 (477)
+..+++.++...+|+++|+++.+. +.+++++||++|+..++.... .++++|++.++.|++...........
T Consensus 44 ~~Y~R~~~pt~~~L~~~lA~l~g~--~~~i~~~sg~~Ai~~~l~~l~--~~GD~Vl~~~~~y~~~~~~~~~~~~~----- 114 (386)
T PRK08045 44 HDYSRRGNPTRDVVQRALAELEGG--AGAVLTNTGMSAIHLVTTVFL--KPGDLLVAPHDCYGGSYRLFDSLAKR----- 114 (386)
T ss_pred ceeeCCCCccHHHHHHHHHHHhCC--CeEEEECCHHHHHHHHHHHHc--CCCCEEEEcCCCcHHHHHHHHHHHhh-----
Confidence 345577889999999999999864 469999999999999887543 36678999999998643221111100
Q ss_pred CCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEE
Q 011777 210 PIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCI 289 (477)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI 289 (477)
.++.....+ .. | .++++++++ +++++|++|..+|++|.+.+ +++|.++|+++|+++|
T Consensus 115 ----~gi~v~~vd-----~~--d----~e~l~~~l~----~~tklV~l~sP~NPtG~v~d----i~~I~~ia~~~g~~vi 171 (386)
T PRK08045 115 ----GCYRVLFVD-----QG--D----EQALRAALA----EKPKLVLVESPSNPLLRVVD----IAKICHLAREAGAVSV 171 (386)
T ss_pred ----CCeEEEEeC-----CC--C----HHHHHHhcc----cCCeEEEEECCCCCCCEecC----HHHHHHHHHHcCCEEE
Confidence 111111111 01 1 367777765 36788888888888887776 8999999999999999
Q ss_pred EcCcccCccCCCCCCccccccCCCccee--eecccccC--ccceEEEEe-CHHHHHhhcccccccCCCCcHHHHHHHHHH
Q 011777 290 ADEVQTGFGRTGSHYWGFETQGVIPDIV--TMAKGIGN--GLPLGAVVT-TPEIANVMAQKIQFNTFGGNPVCSAGGLAV 364 (477)
Q Consensus 290 ~DEv~~gfgr~G~~~~~~~~~gv~pDiv--t~sK~lg~--G~pig~v~~-~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~ 364 (477)
+||+|..... . .. .....|++ +++|.++| +...|++++ ++++.+.+.......+...+|+.+..++..
T Consensus 172 vDeay~~~~~-~-~p-----l~~gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~~~~~~g~~~~p~~~~l~~rg 244 (386)
T PRK08045 172 VDNTFLSPAL-Q-NP-----LALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLRG 244 (386)
T ss_pred EECCCCcccc-C-Cc-----hhhCCCEEEeecceeccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhh
Confidence 9999874321 1 11 12233655 57899985 477888877 577776665433334455778888777777
Q ss_pred HHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCcee------------------eeccceeEEEEEe
Q 011777 365 LRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGD------------------VRGRGLMVGMELV 413 (477)
Q Consensus 365 l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~------------------v~g~g~~~~i~~~ 413 (477)
|+.+. ...++..++...+.+.|++ +|.+.. ..|.|.++.+++.
T Consensus 245 l~tl~--~R~~~~~~na~~la~~L~~----~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~ 305 (386)
T PRK08045 245 LRTLV--PRMELAQRNAQAIVKYLQT----QPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELD 305 (386)
T ss_pred hccHH--HHHHHHHHHHHHHHHHHHc----CCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEec
Confidence 76432 2234445555555555443 333221 2466888888884
No 273
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.70 E-value=4e-15 Score=150.65 Aligned_cols=237 Identities=18% Similarity=0.146 Sum_probs=150.8
Q ss_pred ccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCC
Q 011777 132 TTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPI 211 (477)
Q Consensus 132 ~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~ 211 (477)
.++|.++...+|+++|+++.+. +.+++++||+.|+..++.... .++++||+....|.+..........
T Consensus 64 Y~r~~~p~~~~le~~lA~l~g~--~~al~~~sG~~Ai~~~l~all--~~Gd~Vl~~~~~~~~t~~~~~~~~~-------- 131 (403)
T PRK07810 64 YSRYGNPTVSMFEERLRLIEGA--EACFATASGMSAVFTALGALL--GAGDRLVAARSLFGSCFVVCNEILP-------- 131 (403)
T ss_pred eeCCCCchHHHHHHHHHHHhCC--CcEEEECChHHHHHHHHHHHh--CCCCEEEEccCCcchHHHHHHHHHH--------
Confidence 4567888899999999999864 578899999999999887543 3567787766544332211111000
Q ss_pred CCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEc
Q 011777 212 PQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIAD 291 (477)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~D 291 (477)
..|+....++. . | .++++++++ +++++|++|.+.|+.|.+.+ +++|.++|+++|+++|+|
T Consensus 132 -~~G~~v~~vd~------~-d----~~~l~~ai~----~~tklV~~esp~Nptg~v~d----l~~I~~la~~~g~~vivD 191 (403)
T PRK07810 132 -RWGVETVFVDG------E-D----LSQWEEALS----VPTQAVFFETPSNPMQSLVD----IAAVSELAHAAGAKVVLD 191 (403)
T ss_pred -HcCcEEEEECC------C-C----HHHHHHhcC----cCceEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEE
Confidence 01222222111 0 1 477888775 36789999988888887776 999999999999999999
Q ss_pred CcccCccCCCCCCccccccCCCccee--eecccccC-ccce-EEEEeCHHHHH-hhcccccccCCCCcHHHHHHHHHHHH
Q 011777 292 EVQTGFGRTGSHYWGFETQGVIPDIV--TMAKGIGN-GLPL-GAVVTTPEIAN-VMAQKIQFNTFGGNPVCSAGGLAVLR 366 (477)
Q Consensus 292 Ev~~gfgr~G~~~~~~~~~gv~pDiv--t~sK~lg~-G~pi-g~v~~~~~~~~-~~~~~~~~~t~~~~~~~~aaa~a~l~ 366 (477)
|+|... ... . +.+ .| .|++ +++|.+++ |.++ |+++++++.+. .+...........+|+.++.++..|+
T Consensus 192 ~a~a~~-~~~-~--~~~-~g--aDivv~S~tK~l~g~g~~~gG~v~~~~~~~~~~l~~~~~~~g~~~s~~~a~l~l~~L~ 264 (403)
T PRK07810 192 NVFATP-LLQ-R--GLP-LG--ADVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPALSAFNAWVLLKGLE 264 (403)
T ss_pred CCCCcc-ccC-C--hhh-cC--CcEEEccCCceecCCcCceeEEEEeChHHHHHHHHHHHHHhCCCCCHHHHHHHHhccC
Confidence 998621 111 1 111 23 4666 46799987 7776 77888877554 33322122223467888888777776
Q ss_pred hhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceee------------------eccceeEEEEEe
Q 011777 367 VIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDV------------------RGRGLMVGMELV 413 (477)
Q Consensus 367 ~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v------------------~g~g~~~~i~~~ 413 (477)
.+. ...++..++..++.+.|++ ++.+..| .+.|.++.+++.
T Consensus 265 tl~--~R~~~~~~~a~~~a~~L~~----~p~v~~V~yP~l~~~p~~~~~~~~~~g~g~~~s~~l~ 323 (403)
T PRK07810 265 TLA--LRVRHSNASALRIAEFLEG----HPAVRWVRYPFLPSHPQYDLAKRQMSGGGTVVTFELD 323 (403)
T ss_pred cHH--HHHHHHHHHHHHHHHHHhc----CCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEc
Confidence 543 3344555555555555543 3433322 266888888884
No 274
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.70 E-value=6.1e-15 Score=149.01 Aligned_cols=294 Identities=18% Similarity=0.117 Sum_probs=172.4
Q ss_pred ccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCC
Q 011777 130 HATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKY 209 (477)
Q Consensus 130 ~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~ 209 (477)
+.++++.++...+|+++++++.+. +.+++++||++|+.+++.... .+++.||+..+.|.+..........
T Consensus 57 ~~Y~r~~~pt~~~Le~~lA~l~g~--~~~l~~~sgt~Ai~~~l~al~--~~GD~Vl~~~~~y~~~~~~~~~~~~------ 126 (394)
T PRK07050 57 WRYGLHATPTSLALAQRLAEIEGG--RHALLQPSGLAAISLVYFGLV--KAGDDVLIPDNAYGPNRDHGEWLAR------ 126 (394)
T ss_pred cccCCCCCHHHHHHHHHHHHHhCC--CeEEEeccHHHHHHHHHHHHh--CCCCEEEEecCCcccHHHHHHHHHH------
Confidence 345567888899999999999854 689999999999999997653 3678899999888764321100000
Q ss_pred CCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEE
Q 011777 210 PIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCI 289 (477)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI 289 (477)
..|+....++.. + .++++++++ +++++|++|...|+.|. ...+++|.++|+++|+++|
T Consensus 127 ---~~Gi~v~~vd~~-------~----~~~l~~~i~----~~tklV~le~p~Np~~~----~~di~~I~~ia~~~gi~li 184 (394)
T PRK07050 127 ---DFGITVRFYDPL-------I----GAGIADLIQ----PNTRLIWLEAPGSVTME----VPDVPAITAAARARGVVTA 184 (394)
T ss_pred ---hcCeEEEEECCC-------C----HHHHHHhcC----CCCeEEEEECCCCCCcc----HhhHHHHHHHHHHcCCEEE
Confidence 012222222110 1 256777775 45788888877776654 3449999999999999999
Q ss_pred EcCcccCccCCCCCCccccccCCCccee--eecccccCc--cceEEEEe-CHHHHHhhcccccccCCCCcHHHHHHHHHH
Q 011777 290 ADEVQTGFGRTGSHYWGFETQGVIPDIV--TMAKGIGNG--LPLGAVVT-TPEIANVMAQKIQFNTFGGNPVCSAGGLAV 364 (477)
Q Consensus 290 ~DEv~~gfgr~G~~~~~~~~~gv~pDiv--t~sK~lg~G--~pig~v~~-~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~ 364 (477)
+|++|.. |....+.+ .| .|++ +++|.++|| .+.|++++ ++++.+.+.........+.+|..+..++..
T Consensus 185 vD~a~a~----~~~~~~l~-~G--aDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~lr~ 257 (394)
T PRK07050 185 IDNTYSA----GLAFKPFE-HG--VDISVQALTKYQSGGSDVLMGATITADAELHAKLKLARMRLGIGVSADDCSLVLRG 257 (394)
T ss_pred EECCccc----ccccCHHH-cC--CeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHcC
Confidence 9999862 20111111 23 3655 578999864 67888777 577777665433222234455554444333
Q ss_pred HHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCcee------------------eeccceeEEEEEeeCCCCCCccHHHH
Q 011777 365 LRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGD------------------VRGRGLMVGMELVTDRKEKTPAKAET 426 (477)
Q Consensus 365 l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~------------------v~g~g~~~~i~~~~~~~~~~~~~~~~ 426 (477)
|+.+. ...++..++..++.+.|.+ ++.+.. ..+.|.++.+++..+. .....
T Consensus 258 l~tl~--~Rl~~~~~~a~~la~~L~~----~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~-----~~~~~ 326 (394)
T PRK07050 258 LPSLQ--VRLAAHDRSALEVAEWLKA----RPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERY-----SPAQV 326 (394)
T ss_pred CCcHH--HHHHHHHHHHHHHHHHHHh----CCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCCC-----CHHHH
Confidence 32221 1233344444444444443 332211 1245666667663210 12345
Q ss_pred HHHHHHHHHcCceeeccC-------------------CCCCEEEEeCCCCCcHHHHHHHHHHHHHH
Q 011777 427 AVLFEKLRELGVLVGKGG-------------------LHGNVFRIKPPMCFTKDDADFLVDALDYS 473 (477)
Q Consensus 427 ~~~~~~l~~~Gv~v~~~~-------------------~~~~~iRi~p~~~~t~e~i~~~l~~l~~~ 473 (477)
.++.+.|...++.+.-|+ ..++.|||+..+...++-++.+.++|+.+
T Consensus 327 ~~~~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~iR~svGlE~~~dl~~dl~~al~~~ 392 (394)
T PRK07050 327 DAFVEALELFAIGWSWGGACSLAMPYDVASMRTAKWPHRGTLVRLYIGLEDEADLIADLEQALEAA 392 (394)
T ss_pred HHHHHcCCCCeeccccCCccceEeeCcccccchhhcCCCCCEEEEEeCcCCHHHHHHHHHHHHHHh
Confidence 677777766554332221 12367999877755444444554555444
No 275
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.69 E-value=6.1e-15 Score=148.95 Aligned_cols=296 Identities=16% Similarity=0.085 Sum_probs=178.8
Q ss_pred ccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCC
Q 011777 130 HATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKY 209 (477)
Q Consensus 130 ~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~ 209 (477)
+...++.++...+|+++|+++.+. +..++++||+.|+.+++.... .+++.||+..+.|.+.........
T Consensus 51 ~~y~r~~~p~~~~le~~lA~l~g~--~~av~~~sG~~Ai~~~l~al~--~~Gd~Vi~~~~~y~~t~~~~~~~~------- 119 (391)
T TIGR01328 51 YIYSRLGNPTVSNLEGRIAFLEGT--EAAVATSSGMGAIAATLLTIL--KAGDHLISDECLYGCTFALLEHAL------- 119 (391)
T ss_pred CceeCCCCchHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHHh--CCCCEEEEecCcchHHHHHHHHHH-------
Confidence 445567788899999999999865 457899999999998886542 356778887776654322111110
Q ss_pred CCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEE
Q 011777 210 PIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCI 289 (477)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI 289 (477)
...|+....++. + | .+++++.+. +++++|++|.++++.|.+.+ +++|.++|+++|+++|
T Consensus 120 --~~~G~~~~~vd~------~-d----~e~l~~~i~----~~tklV~le~p~Np~G~v~d----l~~I~~la~~~gi~li 178 (391)
T TIGR01328 120 --TKFGIQVDFINM------A-I----PEEVKAHIK----DNTKIVYFETPANPTMKLID----MERVCRDAHSQGVKVI 178 (391)
T ss_pred --hcCCeEEEEECC------C-C----HHHHHHhhc----cCCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEE
Confidence 011322222111 1 1 467777775 46788999988888887766 9999999999999999
Q ss_pred EcCcccCccCCCCCCccccccCCCccee--eecccccC-ccc-eEEEEeCHHHHHhhcccc--cccCCCCcHHHHHHHHH
Q 011777 290 ADEVQTGFGRTGSHYWGFETQGVIPDIV--TMAKGIGN-GLP-LGAVVTTPEIANVMAQKI--QFNTFGGNPVCSAGGLA 363 (477)
Q Consensus 290 ~DEv~~gfgr~G~~~~~~~~~gv~pDiv--t~sK~lg~-G~p-ig~v~~~~~~~~~~~~~~--~~~t~~~~~~~~aaa~a 363 (477)
+||++.. +..+ .. .+...|++ +++|.+++ |.+ .|++++++++++.++... ...+...+++.++.++.
T Consensus 179 vD~a~a~-~~~~-~~-----~~~g~Divv~S~sK~lgg~g~~~gG~v~~~~~li~~l~~~~~~~~~g~~l~~~~a~l~l~ 251 (391)
T TIGR01328 179 VDNTFAT-PMLT-NP-----VALGVDVVVHSATKYIGGHGDVVAGLICGKAELLQQIRMVGIKDMTGSVISPFDAWLILR 251 (391)
T ss_pred EECCCch-hccC-Cc-----hhcCCCEEEccccccccCCCCceEEEEEcCHHHHHHHHHHHHHhCCCCCCCcHHHHHHHh
Confidence 9999862 2222 11 12235555 57799996 665 577888899887776321 11123345666666666
Q ss_pred HHHhhchhhHHHHHHHHHHHHHHHHHHHHH----hCCCc----------eeeeccceeEEEEEeeCCCCCCccHHHHHHH
Q 011777 364 VLRVIDKERRQAHCADVGSHLLGRLRTLQE----RHDII----------GDVRGRGLMVGMELVTDRKEKTPAKAETAVL 429 (477)
Q Consensus 364 ~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~----~~~~~----------~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~ 429 (477)
.|+.+ +...++..++.+++.+.|++... .||.. ...++.|.++.|++..+ .....++
T Consensus 252 ~L~tl--~~r~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~~~g~~~s~~~~~~-------~~~~~~f 322 (391)
T TIGR01328 252 GLKTL--NIRMKRHSENAMKVAEYLKSHPAVEKVYYPGFEDHPGHDIAAKQMRMGGGMITFELKGG-------FAGAKKL 322 (391)
T ss_pred CcCcH--HHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEeCCC-------HHHHHHH
Confidence 55543 23355566667777666654210 11111 01245677888887421 1223445
Q ss_pred HHHHHH--cCcee--------ecc---------------CCCCCEEEEeCCCCCcHHHHHHHHHHHHHHHhhC
Q 011777 430 FEKLRE--LGVLV--------GKG---------------GLHGNVFRIKPPMCFTKDDADFLVDALDYSMSKL 477 (477)
Q Consensus 430 ~~~l~~--~Gv~v--------~~~---------------~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~l 477 (477)
.+.|.= .+.-. .|. |...+.|||+..+ ||.+.+++-|++++++|
T Consensus 323 ~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~~~ 391 (391)
T TIGR01328 323 LNNLKLIRLAVSLGDAETLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGL----EDADDLIADLKQALDAL 391 (391)
T ss_pred HHhCCcceEecCCCCCcccCcCCCccccccCCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHHHhhC
Confidence 544431 11111 010 1123579997665 56777788888887654
No 276
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.69 E-value=7.7e-15 Score=147.66 Aligned_cols=289 Identities=18% Similarity=0.183 Sum_probs=179.3
Q ss_pred ccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCC
Q 011777 132 TTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPI 211 (477)
Q Consensus 132 ~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~ 211 (477)
.++|.++...+|+++|+++.+. +.+++++||++|+..++.... .+++.|++..++|.+...........
T Consensus 45 Y~R~~~p~~~~le~~lA~l~g~--~~v~~~~gg~~Ai~~~l~all--~~GD~Vl~~~p~y~~~~~~~~~~~~~------- 113 (382)
T TIGR02080 45 YSRSGNPTRDLLQQALAELEGG--AGAVVTNTGMSAIHLVTTALL--GPDDLLVAPHDCYGGTYRLLNALAKK------- 113 (382)
T ss_pred ccCCCCchHHHHHHHHHHHhCC--CcEEEEcCHHHHHHHHHHHHc--CCCCEEEEcCCCcHHHHHHHHHHHhh-------
Confidence 4567889999999999998863 679999999999999987653 36678999999997643221111110
Q ss_pred CCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEc
Q 011777 212 PQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIAD 291 (477)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~D 291 (477)
.++.....+. .| .++++++++ +++++|+++..++++|.+.+ +++|.++|+++|+++|+|
T Consensus 114 --~~~~v~~~d~-------~d----~~~l~~ai~----~~tklV~l~~p~NPtG~~~d----l~~I~~la~~~g~~vvvD 172 (382)
T TIGR02080 114 --GCFRVLFVDQ-------GD----EQALRAALA----QKPKLVLIETPSNPLLRVVD----IAKICHLAKAVGAVVVVD 172 (382)
T ss_pred --cCeEEEEECC-------CC----HHHHHHhcC----cCceEEEEECCCCCCCEecC----HHHHHHHHHHcCCEEEEE
Confidence 1111111110 01 467777775 35788888888888887776 899999999999999999
Q ss_pred CcccCccCCCCCCccccccCCCccee--eecccccC--ccceEEEEe-CHHHHHhhcccccccCCCCcHHHHHHHHHHHH
Q 011777 292 EVQTGFGRTGSHYWGFETQGVIPDIV--TMAKGIGN--GLPLGAVVT-TPEIANVMAQKIQFNTFGGNPVCSAGGLAVLR 366 (477)
Q Consensus 292 Ev~~gfgr~G~~~~~~~~~gv~pDiv--t~sK~lg~--G~pig~v~~-~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~ 366 (477)
|+|..+... .. .. .+ .|++ +++|.++| ++..|++++ ++++.+.+.......+...+|+.+..++..++
T Consensus 173 ~a~~~~~~~--~p--l~-~g--aDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~~~~~~g~~~sp~~a~l~lr~l~ 245 (382)
T TIGR02080 173 NTFLSPALQ--NP--LA-LG--ADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAWWANNLGVTGGAFDSYLTLRGLR 245 (382)
T ss_pred CCCcccccC--Cc--hh-hC--CCEEEeecceeccCCCCceeEEEEeCCHHHHHHHHHHHHccCCCCCHHHHHHHHcccc
Confidence 999633111 11 11 23 3655 57899985 578899877 57777766544333445677888777766665
Q ss_pred hhchhhHHHHHHHHHHHHHHHHHHHHHhCCCce------------------eeeccceeEEEEEeeCCCCCCccHHHHHH
Q 011777 367 VIDKERRQAHCADVGSHLLGRLRTLQERHDIIG------------------DVRGRGLMVGMELVTDRKEKTPAKAETAV 428 (477)
Q Consensus 367 ~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~------------------~v~g~g~~~~i~~~~~~~~~~~~~~~~~~ 428 (477)
.+.. ..++..++...+.+.|+ .+|.+. ...|.|.++.+++..+ ......
T Consensus 246 tl~~--R~~~~~~na~~~a~~L~----~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~-------~~~~~~ 312 (382)
T TIGR02080 246 TLVA--RMRLQQRNAQAIVEYLQ----TQPLVKKIYYPGLPDHPGHEIAARQQKGFGAMLSFELKGG-------EQTVRR 312 (382)
T ss_pred hHHH--HHHHHHHHHHHHHHHHH----hCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEecCc-------HHHHHH
Confidence 4432 23444455555555554 334322 1246688888888421 112334
Q ss_pred HHHHHHHcCceee----------cc---------------CCCCCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 429 LFEKLRELGVLVG----------KG---------------GLHGNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 429 ~~~~l~~~Gv~v~----------~~---------------~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
+.+.|.=-.+.+. |. |...+.|||+..+ |+.+.+++-|++++++
T Consensus 313 f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGl----E~~~dl~~dl~~al~~ 381 (382)
T TIGR02080 313 FLGGLSLFTLAESLGGVESLIAHPATMTHAAMGPEARAEAGISDTLLRLSVGL----EDADDLIADLEQGLRA 381 (382)
T ss_pred HHHcCCcceEeccCCCCcceeECCCccCcccCCHHHHHhcCCCcCeEEEEecc----CCHHHHHHHHHHHHhh
Confidence 5544431111111 10 1123679997665 4566677777777653
No 277
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.69 E-value=1.8e-14 Score=149.43 Aligned_cols=324 Identities=17% Similarity=0.153 Sum_probs=186.9
Q ss_pred CCCHHHHHHHHHHHhhccc-cc-----cccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhc------c
Q 011777 112 HCHPDVLNAIFEQSKLLQH-AT-----TIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLS------T 179 (477)
Q Consensus 112 h~~p~v~~Av~~~l~~~~~-~~-----~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~------~ 179 (477)
|.+|.|++++.+......+ .. ..+..+.+.++.++++++++.+ ...++.++|+.+...++.+++.+ +
T Consensus 81 ~~~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~~-~~~l~~~~GA~a~~~~l~~~r~~~~~~Gd~ 159 (481)
T PRK04366 81 KYNPKINEKVARLPGFAELHPLQPEETVQGALELMYELQEWLKEITGMD-AVTLQPAAGAHGELTGLLMIRAYHEARGDT 159 (481)
T ss_pred CCCHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHHHHHHHhCCC-ceEEEeCcHHHHHHHHHHHHHHHhhccCcC
Confidence 4678888888775221111 11 1112345678888888888654 33455567777776655544331 1
Q ss_pred CCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecc
Q 011777 180 GNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAET 259 (477)
Q Consensus 180 ~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~ep 259 (477)
++++|++.++.|+.+... .... |+..+.+|... .+..| +++|+++++ +++++|++..
T Consensus 160 ~~~~Vlv~~~~hp~~~~~-~~~~------------G~~vv~v~~~~--~~~~D----~e~L~~~i~----~~t~~V~v~~ 216 (481)
T PRK04366 160 KRTEVIVPDSAHGTNPAS-AAMA------------GFKVVEIPSNE--DGLVD----LEALKAAVG----EDTAALMLTN 216 (481)
T ss_pred CCCEEEEcCCccHhHHHH-HHHc------------CCEEEEeecCC--CCCcC----HHHHHhhcc----cCCeEEEEeC
Confidence 345788877766554432 2221 22222222211 11111 477777775 3566665554
Q ss_pred cCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCcceeee--ccccc-----CccceEEE
Q 011777 260 IQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTM--AKGIG-----NGLPLGAV 332 (477)
Q Consensus 260 i~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~--sK~lg-----~G~pig~v 332 (477)
.+ ++|.+ ...+++|.++|+++|+++|+|+++. .+..| . .....+| .|++++ .|.++ ||..+|++
T Consensus 217 Pn-~tG~~---~~dl~eI~~~a~~~gal~iVD~a~~-~~~~g-~-~~~~~~G--aD~~~~~~hK~l~~P~g~Ggp~~G~l 287 (481)
T PRK04366 217 PN-TLGLF---ERNILEIAEIVHEAGGLLYYDGANL-NAILG-K-ARPGDMG--FDVVHLNLHKTFSTPHGGGGPGSGPV 287 (481)
T ss_pred CC-Ccccc---chHHHHHHHHHHHcCCEEEEEecCh-hhhcc-c-CCccccC--CCEEEEechhhcCCCCCCCCCCeeee
Confidence 33 55644 2238999999999999999999985 32223 1 1112233 587765 49887 34567888
Q ss_pred EeCHHHHHhhcccc-------------------cccCCCCcHHHHHHHHHHHHhhchhhH---HHHHHHHHHHHHHHHHH
Q 011777 333 VTTPEIANVMAQKI-------------------QFNTFGGNPVCSAGGLAVLRVIDKERR---QAHCADVGSHLLGRLRT 390 (477)
Q Consensus 333 ~~~~~~~~~~~~~~-------------------~~~t~~~~~~~~aaa~a~l~~l~~~~~---~~~~~~~~~~l~~~L~~ 390 (477)
.+++++.+.+.... ..-.++++.+...++...+..+..+.+ .++...+.++++++|.+
T Consensus 288 ~~~~~~~~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~ 367 (481)
T PRK04366 288 GVKEELAPFLPVPVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKD 367 (481)
T ss_pred eehhhhHhhCCCCeeeccCCceeecccccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHh
Confidence 89988777663210 001122345555666666666555544 35556678899998887
Q ss_pred HHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccC---CCCCEEEEeCCCCCcHHHHHHHH
Q 011777 391 LQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGG---LHGNVFRIKPPMCFTKDDADFLV 467 (477)
Q Consensus 391 l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~---~~~~~iRi~p~~~~t~e~i~~~l 467 (477)
+ +.+... + ..+..+.+....- . ..+....++.+.|.++|+.+.... ...+.+|+++...+|++|||.++
T Consensus 368 ~---~~~~~~--~-~~~~~~~~~~~~~-~-~~g~~~~~v~~~L~~~Gi~~~~~~~p~~~~~~l~is~~e~~t~edid~l~ 439 (481)
T PRK04366 368 I---YDLPYD--R-PCMHEFVLSGKKL-K-ETGVRTLDIAKRLLDYGFHPPTIYFPLIVPEALMIEPTETESKETLDAFI 439 (481)
T ss_pred h---CcccCC--C-CeeEEEEEECccc-c-ccCCCHHHHHHHHHHCCccCCccccccccCCeEEEcccCCCCHHHHHHHH
Confidence 6 222211 1 1111111111000 0 001125679999999999875221 12568999999999999999999
Q ss_pred HHHHHHHhh
Q 011777 468 DALDYSMSK 476 (477)
Q Consensus 468 ~~l~~~l~~ 476 (477)
+.|+++.++
T Consensus 440 ~~l~~i~~~ 448 (481)
T PRK04366 440 AAMKQIAEE 448 (481)
T ss_pred HHHHHHHHH
Confidence 999988653
No 278
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.69 E-value=2.1e-14 Score=144.31 Aligned_cols=309 Identities=14% Similarity=0.074 Sum_probs=185.7
Q ss_pred HHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCC
Q 011777 115 PDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGG 194 (477)
Q Consensus 115 p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~ 194 (477)
++..+++.+.+.....+ ...+...++++++++.++ .+.+++++||++|+..+++.. ...+++.||+...+|.+.
T Consensus 11 ~~e~~a~~~~~~~~~~~---~~g~~~~~~e~~la~~~g--~~~~v~~~sgt~aL~~~l~al-~~~pGd~Viv~~~t~~~~ 84 (376)
T TIGR02379 11 GQELEYIAEAISEGKLS---GDGPFSRRCETWLENRTG--TKKALLTPSCTAALEMAALLL-DIQPGDEVIMPSYTFVST 84 (376)
T ss_pred HHHHHHHHHHHHcCCcc---CCcHHHHHHHHHHHHHhC--CCeEEEeCCHHHHHHHHHHHc-CCCCcCEEEECCCCcHHH
Confidence 55677888877654321 134668899999999874 478999999999999988754 234678899988888765
Q ss_pred cccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhH
Q 011777 195 SSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYL 274 (477)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l 274 (477)
....... |...+.++.... .++.| .++++++++ .++++|+ |++ ..|...+ +
T Consensus 85 ~~~~~~~-------------G~~~v~vd~d~~-~~~~d----~~~le~~i~----~~tk~Ii--p~~-~~G~~~d----~ 135 (376)
T TIGR02379 85 ANAFVLR-------------GAKIVFVDIRPD-TMNID----ETLIESAIT----HRTKAIV--PVH-YAGVACD----M 135 (376)
T ss_pred HHHHHHc-------------CCEEEEEecCCC-cCCCC----HHHHHHhcC----cCceEEE--EeC-CCCCccC----H
Confidence 4433322 222222221111 12222 467777775 3566776 443 3455554 8
Q ss_pred HHHHHHHHHhCcEEEEcCcccCcc-CCCCCCccccccCCCcceeeec----ccccCccceEEEEeC-HHHHHhhccccc-
Q 011777 275 KLVYDIVRKAGGVCIADEVQTGFG-RTGSHYWGFETQGVIPDIVTMA----KGIGNGLPLGAVVTT-PEIANVMAQKIQ- 347 (477)
Q Consensus 275 ~~l~~l~~~~gillI~DEv~~gfg-r~G~~~~~~~~~gv~pDivt~s----K~lg~G~pig~v~~~-~~~~~~~~~~~~- 347 (477)
++|.++|++||+++|.|++|+-.. ..| ...|..-|+.+|| |.+..|.+.|+++++ +++.+.++....
T Consensus 136 ~~I~~la~~~~i~vIeDaa~~~g~~~~~------~~~g~~~~~~~fSf~~~K~l~~g~~gG~v~~~~~~~~~~~~~~~~~ 209 (376)
T TIGR02379 136 DTIMALANKHQLFVIEDAAQGVMSTYKG------RALGSIGHLGTFSFHETKNYTSGGEGGALLINDQAFIERAEIIREK 209 (376)
T ss_pred HHHHHHHHHCCCEEEEECccccCCccCC------cccCCCCCEEEEeCCCCCcCcccCCceEEEECCHHHHHHHHHHHHh
Confidence 999999999999999999997322 222 1223344788888 999888788988876 777776653211
Q ss_pred --------------------ccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhC--CCceeeecc-
Q 011777 348 --------------------FNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERH--DIIGDVRGR- 404 (477)
Q Consensus 348 --------------------~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~--~~~~~v~g~- 404 (477)
+..+..+.+.++.+++.|+.+ +++.++-++..++..+.|..+.... .......+.
T Consensus 210 g~~~~~~~~~~~~~~~~~~~g~n~~~~~~~Aa~g~~qL~~l--~~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~ 287 (376)
T TIGR02379 210 GTNRSQFFRGEVDKYTWRDIGSSYLPSELQAAYLWAQLEQA--DRINQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQ 287 (376)
T ss_pred CCCCccccccCCCcceeeeecccCCccHHHHHHHHHHHHHh--HHHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCe
Confidence 111222355556666666654 3345555566666666665542110 000001111
Q ss_pred c--eeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccC----C------C--------------CCEEEEeCCCCC
Q 011777 405 G--LMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGG----L------H--------------GNVFRIKPPMCF 458 (477)
Q Consensus 405 g--~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~----~------~--------------~~~iRi~p~~~~ 458 (477)
. .++.+.+.. ....+++.+.|.++||.+.... . + .+.|.+=.....
T Consensus 288 ~~~~~~~i~~~~--------~~~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~~~~~~~~~l~LP~~~~l 359 (376)
T TIGR02379 288 HNAHMFYIKLKD--------EDDRNELIKYLKEQEIMAVFHYVPLHSSPAGRYFGRFHGEDIYTTKESERLVRLPLYYGL 359 (376)
T ss_pred eeeEEEEEEECC--------cCCHHHHHHHHHHCCCCccccCcCCCcchhHHhhCCCCCCChHHHHHHhceEEccCCCCC
Confidence 1 122333311 0124688999999999765210 0 0 123444223347
Q ss_pred cHHHHHHHHHHHHHHH
Q 011777 459 TKDDADFLVDALDYSM 474 (477)
Q Consensus 459 t~e~i~~~l~~l~~~l 474 (477)
|++|+++.++.|.+++
T Consensus 360 ~~~~~~~i~~~i~~~~ 375 (376)
T TIGR02379 360 SKEDQARVIQTICDYL 375 (376)
T ss_pred CHHHHHHHHHHHHHHh
Confidence 9999999999998865
No 279
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.69 E-value=3.1e-15 Score=150.00 Aligned_cols=293 Identities=14% Similarity=0.093 Sum_probs=176.2
Q ss_pred cccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCC
Q 011777 133 TIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIP 212 (477)
Q Consensus 133 ~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~ 212 (477)
++..+|....|+++|+++.+. +.+++++||++|+..++... ..++++||+.++.|++......... .
T Consensus 45 ~r~gnPt~~~lE~~lA~l~g~--~~~~~~~sG~~Ai~~al~al--l~~GD~Vl~~~~~y~~t~~~~~~~~--~------- 111 (377)
T TIGR01324 45 GRRGTLTHFALQDAMCELEGG--AGCYLYPSGLAAVTNSILAF--VKAGDHVLMVDSAYEPTRYFCDIVL--K------- 111 (377)
T ss_pred cCCCCccHHHHHHHHHHHhCC--CcEEEECcHHHHHHHHHHHh--cCCCCEEEEcCCCcHHHHHHHHHHH--H-------
Confidence 345678888999999998864 57889999999999998755 2356788888999987532111000 0
Q ss_pred CCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcC
Q 011777 213 QGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADE 292 (477)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DE 292 (477)
..++....+. .. + .+++++.++ +++++|++|.+.++.|.+.+ +++|.++|+++|+++|+|+
T Consensus 112 ~~gi~v~~~d------~~-~----~e~l~~~i~----~~tklV~lesp~Np~g~~~d----l~~I~~la~~~g~~livD~ 172 (377)
T TIGR01324 112 RMGVDITYYD------PL-I----GEDIATLIQ----PNTKVLFLEAPSSITFEIQD----IPAIAKAARNPGIVIMIDN 172 (377)
T ss_pred hcCcEEEEEC------CC-C----HHHHHHhcC----CCceEEEEECCCCCCCcHHH----HHHHHHHHHHcCCEEEEEC
Confidence 0122211110 01 1 156777665 46889999988888876665 9999999999999999999
Q ss_pred cccCccCCCCCCccccccCCCcceee--ecccccC--ccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhh
Q 011777 293 VQTGFGRTGSHYWGFETQGVIPDIVT--MAKGIGN--GLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVI 368 (477)
Q Consensus 293 v~~gfgr~G~~~~~~~~~gv~pDivt--~sK~lg~--G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l 368 (477)
+|+ .|... .. .....|+++ ++|.++| +.-.|+++++++.++.+...........+|..+...+..++.+
T Consensus 173 t~a-~g~~~-~p-----l~~gaDivv~S~tK~l~G~~d~~gG~v~~~~~~~~~l~~~~~~~G~~l~p~~a~~~~rgl~tl 245 (377)
T TIGR01324 173 TWA-AGLLF-KP-----LEHGVDISIQAGTKYLVGHSDIMIGTVVANARTWDQLREHSYLMGQMVDADDAYTTLRGLRTL 245 (377)
T ss_pred CCc-ccccc-Cc-----cccCceEEEecCceeccCCCCceEEEEEeCHHHHHHHHHHHHHhCCCCCHHHHHHHHhhhhhH
Confidence 997 33222 11 123457665 5799986 3677899999887776653222222334566665555555543
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHH---H-hCCCce----------eeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHH
Q 011777 369 DKERRQAHCADVGSHLLGRLRTLQ---E-RHDIIG----------DVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLR 434 (477)
Q Consensus 369 ~~~~~~~~~~~~~~~l~~~L~~l~---~-~~~~~~----------~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~ 434 (477)
. -..++..++...+.+.|.+.. . .||... ...+.|.++.+++... ......++.+.|+
T Consensus 246 ~--~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~------~~~~~~~~~~~l~ 317 (377)
T TIGR01324 246 G--VRLKQHQESSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRL------TQKQVHAFLDHLQ 317 (377)
T ss_pred H--HHHHHHHHHHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECCC------CHHHHHHHHHhCC
Confidence 2 123344444444444444311 0 111110 1235677888888421 1233456666665
Q ss_pred HcCceeeccC---------------------CCCCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 435 ELGVLVGKGG---------------------LHGNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 435 ~~Gv~v~~~~---------------------~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
-.++.+.-|+ ..++.|||+..+ ||.+.+++-|++++++
T Consensus 318 ~~~~~~slG~~~sl~~~~~~~~~~~~~~~~~~~~~liR~svGl----E~~~dl~~dl~~al~~ 376 (377)
T TIGR01324 318 LFGLGYSWGGYESLALCNQPELGHRPNIKRNLEGPLIRVHIGL----ENVDDLKADLKAGFEA 376 (377)
T ss_pred cceEeccCCCccceeecCCCCCCHHHHHhccCCCCEEEEEeCC----CCHHHHHHHHHHHHhc
Confidence 4333322111 123578997665 4566667777777654
No 280
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.69 E-value=7.8e-15 Score=148.55 Aligned_cols=243 Identities=16% Similarity=0.123 Sum_probs=152.2
Q ss_pred ccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCC
Q 011777 130 HATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKY 209 (477)
Q Consensus 130 ~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~ 209 (477)
+...+|.++...+|+++|+++.+. +....++||+.|+..++.... .++++|++..+.|.+.........
T Consensus 57 ~~y~r~~~p~~~~Le~~lA~l~G~--~~~~~~~sG~~Ai~~~l~~~l--~~Gd~Vl~~~~~y~~~~~~~~~~~------- 125 (398)
T PRK07504 57 FIYSRYSNPTVDMFEKRMCALEGA--EDARATASGMAAVTAAILCQV--KAGDHVVAARALFGSCRYVVETLL------- 125 (398)
T ss_pred ceeecCCCchHHHHHHHHHHHhCC--CeeeEecCHHHHHHHHHHHHh--CCCCEEEEcCCchhHHHHHHHHHH-------
Confidence 334567788899999999999865 455678899999988776432 356788888887776432211110
Q ss_pred CCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEE
Q 011777 210 PIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCI 289 (477)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI 289 (477)
...|+....++. . | .++++++++ +++++|++|.++++.|.+.+ +++|.++|+++|+++|
T Consensus 126 --~~~G~~v~~vd~-----~--d----~e~l~~ai~----~~tklV~lesp~NptG~v~d----l~~I~~la~~~gi~lv 184 (398)
T PRK07504 126 --PRYGIESTLVDG-----L--D----LDNWEKAVR----PNTKVFFLESPTNPTLEVID----IAAVAKIANQAGAKLV 184 (398)
T ss_pred --hhcCeEEEEECC-----C--C----HHHHHHhcC----cCceEEEEECCCCCCcEecC----HHHHHHHHHHcCCEEE
Confidence 011222222211 1 1 477777775 46789999988888887776 9999999999999999
Q ss_pred EcCcccCccCCCCCCccccccCCCccee--eecccccC-ccceE-EEEeCHHHHHh-hcccccccCCCCcHHHHHHHHHH
Q 011777 290 ADEVQTGFGRTGSHYWGFETQGVIPDIV--TMAKGIGN-GLPLG-AVVTTPEIANV-MAQKIQFNTFGGNPVCSAGGLAV 364 (477)
Q Consensus 290 ~DEv~~gfgr~G~~~~~~~~~gv~pDiv--t~sK~lg~-G~pig-~v~~~~~~~~~-~~~~~~~~t~~~~~~~~aaa~a~ 364 (477)
+||+|+.+. .. ... ..| .|++ +++|.+++ |.++| +++++++.++. +...........+++.++.++..
T Consensus 185 vD~a~a~~~-~~-~~~---~~g--aDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~~~~~~g~~~s~~~A~~~l~~ 257 (398)
T PRK07504 185 VDNVFATPL-FQ-KPL---ELG--AHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQDYFRHTGPSLSPFNAWTLLKG 257 (398)
T ss_pred EECCccccc-cC-Cch---hhC--CCEEEeeccccccCCccceEEEEEeCcHHHHHHHHHHHHHhCCCCCHHHHHHHHhc
Confidence 999987321 11 111 123 4665 56799986 88886 66677765542 33211112234567777777777
Q ss_pred HHhhchhhHHHHHHHHHHHHHHHHHHHHH----hCCCce----------eeeccceeEEEEEe
Q 011777 365 LRVIDKERRQAHCADVGSHLLGRLRTLQE----RHDIIG----------DVRGRGLMVGMELV 413 (477)
Q Consensus 365 l~~l~~~~~~~~~~~~~~~l~~~L~~l~~----~~~~~~----------~v~g~g~~~~i~~~ 413 (477)
|+.+. ...++..++..++.+.|.+... .||... ..+|.|.|+.|++.
T Consensus 258 L~tl~--~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~ 318 (398)
T PRK07504 258 LETLP--VRVRQQTESAAAIADFLAGHPKVARVIYPGRADHPQADIIAKQMTGGSTLVAFELK 318 (398)
T ss_pred cchHH--HHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHHhCCCCccEEEEEeC
Confidence 76653 2344455666666666654210 111111 12456889999884
No 281
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.68 E-value=1.1e-14 Score=146.86 Aligned_cols=314 Identities=17% Similarity=0.046 Sum_probs=181.8
Q ss_pred CHH-HHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCC-CCEEEEeC-ChHHHHHHHHHHHHhccCCceEEEEccC
Q 011777 114 HPD-VLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGN-LKVVYFVN-SGTEANELAMLMARLSTGNLGMIALRNA 190 (477)
Q Consensus 114 ~p~-v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~-~~~v~~~~-sGseA~~~Al~~ar~~~~~~~ii~~~~~ 190 (477)
+|+ |++|+.+.+....|... .......+.++.|+++++.. ..+|+|+. |||++++.++.... .+++.+++. .+
T Consensus 24 ~~~~v~~a~~~~~~~~~hr~~-~f~~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~l~--~~~~~~vi~-~g 99 (378)
T PRK03080 24 RPGWQLEALADALLGRSHRQK-PVKALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWSLL--GARRVDHLA-WE 99 (378)
T ss_pred ChHHHHHHHHhhhcccCcCCH-HHHHHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHHhcC--CCCcceEEE-eC
Confidence 677 99998765432223322 12455778888999988753 34677775 99999999987542 222223333 45
Q ss_pred ccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCC
Q 011777 191 YHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELA 270 (477)
Q Consensus 191 yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~ 270 (477)
.||.......... +.. ..+..+..+ +.... ++++ ++ .++.|.+..+.+.+|.+.|
T Consensus 100 ~f~~~~~~~~~~~---~g~----~~v~~~~~~--~g~~~---------d~~~-i~-----~~~~V~~~h~~t~tG~~~p- 154 (378)
T PRK03080 100 SFGSKWATDVVKQ---LKL----EDPRVLEAD--YGSLP---------DLSA-VD-----FDRDVVFTWNGTTTGVRVP- 154 (378)
T ss_pred HHHHHHHHHHHhh---cCC----CCceEeccC--CCCCC---------CHhh-cC-----CCCCEEEEecCCccceecc-
Confidence 6665332211000 000 011111111 11111 1222 22 1234666667777888887
Q ss_pred chhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCcceeeec--ccccCccceEEEEeCHHHHHhhcccc--
Q 011777 271 PGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMA--KGIGNGLPLGAVVTTPEIANVMAQKI-- 346 (477)
Q Consensus 271 ~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~s--K~lg~G~pig~v~~~~~~~~~~~~~~-- 346 (477)
+++|.+ ++||+++|+|-+|+ +|. ..+ +..+ .|++++| |++++...+|+++.+++..+.+....
T Consensus 155 ---i~~I~~--~~~g~~~vVDa~qs-~G~---~pi--dv~~--iD~~~~s~~K~l~~P~G~g~l~v~~~~~~~~~p~~~~ 221 (378)
T PRK03080 155 ---VARWIG--ADREGLTICDATSA-AFA---LPL--DWSK--LDVYTFSWQKVLGGEGGHGMAILSPRAVERLESYTPA 221 (378)
T ss_pred ---chhhcc--ccCCCeEEEecccc-ccc---CCC--CHHH--CcEEEEehhhhCCCCCceEEEEECHHHHHhhhcccCC
Confidence 888888 78999999999998 432 222 3333 4888766 99987677999999999887654321
Q ss_pred --------------------cccCCCCc-HHHHHHHHHHHHhhchh-h---HHHHHHHHHHHHHHHHHHHHHhCCCce-e
Q 011777 347 --------------------QFNTFGGN-PVCSAGGLAVLRVIDKE-R---RQAHCADVGSHLLGRLRTLQERHDIIG-D 400 (477)
Q Consensus 347 --------------------~~~t~~~~-~~~~aaa~a~l~~l~~~-~---~~~~~~~~~~~l~~~L~~l~~~~~~~~-~ 400 (477)
..+|++.+ ..+..+..++|+.+.+. . ..++.+++.+++++.|+++.. ..... .
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~-~~~~~~~ 300 (378)
T PRK03080 222 RPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDWAEKTPW-ATPLVAD 300 (378)
T ss_pred CCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCC-cccccCC
Confidence 12233333 33444446778877653 3 345555566666666654420 01111 1
Q ss_pred eeccc-eeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCC--CCCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 401 VRGRG-LMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGL--HGNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 401 v~g~g-~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~--~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
...++ .++.+.+.. ++.....++...++++|+++..++. .++.+|+++...++++||+.+++.|++++++
T Consensus 301 ~~~~s~~i~~~~~~~------~~~~~~~~~~~~l~~~~i~v~~g~~~~~~~~vRis~~~~~t~~di~~l~~al~~~~~~ 373 (378)
T PRK03080 301 PATRSNTSVTLDFVD------AQAAVDAAAVAKLLRENGAVDIEPYRDAPNGLRIWCGPTVEPADVEALTPWLDWAFER 373 (378)
T ss_pred ccccCccEEEEEcCC------chHHHHHHHHHHHHHcCCeeccccccCCCCcEEEecCCCCCHHHHHHHHHHHHHHHHH
Confidence 11122 344554311 0001123455667778888876532 2478999999999999999999999998764
No 282
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.68 E-value=3e-14 Score=130.85 Aligned_cols=305 Identities=14% Similarity=0.110 Sum_probs=179.8
Q ss_pred CChHHHHHHHHHHhhCCCCC--CEEEEeCChHHHHHHHHHHHHhc--cCC-ceEE-EEccCccCCcccccccccCCCCCC
Q 011777 136 LHHAIADFAEALASKMPGNL--KVVYFVNSGTEANELAMLMARLS--TGN-LGMI-ALRNAYHGGSSGTIGLTALNTWKY 209 (477)
Q Consensus 136 ~~~~~~~l~~~La~~~~~~~--~~v~~~~sGseA~~~Al~~ar~~--~~~-~~ii-~~~~~yhG~~~~~~~~~~~~~~~~ 209 (477)
..+....|++.|.+.++++. +++.+||+...|.-.+..+.--+ .|. ++|+ -..+-|-|+.+..+.-.....++.
T Consensus 76 ~~~li~ala~~l~~~ygwnit~~NIalTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d~fVs~kP 155 (417)
T COG3977 76 KAVLIDALAKMLRREYGWNITAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEEDLFVSAKP 155 (417)
T ss_pred hhHHHHHHHHHHHHHhCCCCccceeeecCCccchHHHHHHHhcCccCCCcceeEeeccChhhccccccccCccceeeccC
Confidence 34667788888888887664 58999999988887776654211 222 2333 367788888666544322111221
Q ss_pred CCCCCCeeeec-CCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEE
Q 011777 210 PIPQGEIHHVV-NPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVC 288 (477)
Q Consensus 210 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gill 288 (477)
.+. .++ -...|+ -|++.+-- .+.+.+|++.-..+++|. +.+.+.+.+|.+++++||+.+
T Consensus 156 ~ie-----l~~~g~FKY~-----------vDF~~l~i---~e~~g~ic~SRPtNPTGN-VlTdeE~~kldalA~~~giPl 215 (417)
T COG3977 156 NIE-----LLPAGQFKYH-----------VDFEHLHI---GESTGAICVSRPTNPTGN-VLTDEELAKLDALARQHGIPL 215 (417)
T ss_pred Ccc-----cccccceeec-----------cCHHHccc---ccccceEEecCCCCCCCC-cccHHHHHHHHHHhhhcCCcE
Confidence 111 110 000111 12222211 357888888877777775 458888999999999999999
Q ss_pred EEcCcccCccCCCCCCccccccCC----Cccee---eecccccCccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHH
Q 011777 289 IADEVQTGFGRTGSHYWGFETQGV----IPDIV---TMAKGIGNGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGG 361 (477)
Q Consensus 289 I~DEv~~gfgr~G~~~~~~~~~gv----~pDiv---t~sK~lg~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa 361 (477)
|+|.+|. .-+.| +-..++ .++++ ++||.=-.|.|+|.+++++++++.+.......+.....++.|.+
T Consensus 216 iIDnAYg-~PFP~-----iifsd~~~~w~~NiilC~SLSK~GLPG~R~GIiIane~viqaitnmn~iisLap~~~G~Aia 289 (417)
T COG3977 216 IIDNAYG-VPFPG-----IIFSDATPLWNENIILCMSLSKLGLPGSRCGIIIANEKVIQAITNMNGIISLAPGRMGPAIA 289 (417)
T ss_pred EEecccC-CCCCc-----eecccccccCCCCEEEEeehhhcCCCCcceeEEEccHHHHHHHHhccceeeecCCCccHHHH
Confidence 9999985 32222 111222 23333 45675446999999999999999887643222222223344444
Q ss_pred HHHHHhhc-----hhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeE-EEEEeeCCCCCCccHHHHHHHHHHHHH
Q 011777 362 LAVLRVID-----KERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMV-GMELVTDRKEKTPAKAETAVLFEKLRE 435 (477)
Q Consensus 362 ~a~l~~l~-----~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~-~i~~~~~~~~~~~~~~~~~~~~~~l~~ 435 (477)
...++..+ ++-...-+++..+.....|++....++ ..-.+++|.++ |+-|.+- | .....++++|++
T Consensus 290 ~~mie~gdl~rlseqVIrPFY~~~~q~~~~~l~~~lp~~~-~~iHkpEGAIFlWLWf~dL-----P--Itt~~LYq~LKa 361 (417)
T COG3977 290 AEMIESGDLLRLSEQVIRPFYRNRVQTTIAILRRYLPEYR-CLIHKPEGAIFLWLWFKDL-----P--ITTEELYQRLKA 361 (417)
T ss_pred HHHhhcchHHHHHHHhhhHHHHHHHHHHHHHHHHhcCccc-eeeecCCcceeehhhhccC-----C--CCHHHHHHHHHh
Confidence 44443211 111111122222333333333222222 22346677644 5555321 1 235789999999
Q ss_pred cCceeeccCC-----------CCCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 436 LGVLVGKGGL-----------HGNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 436 ~Gv~v~~~~~-----------~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
+||++.||.. .+.|+|+ +++-++++|+..+.+|.+.+++
T Consensus 362 ~Gvl~VPG~~FFpGl~~ewpH~hqC~Rm--n~~~~~~~ie~Gva~lae~ve~ 411 (417)
T COG3977 362 RGVLMVPGHYFFPGLDKEWPHTHQCMRM--NYVPEPEKIEKGVAILAEEVER 411 (417)
T ss_pred CeEEEecccccCCCCCCCCCCccceEEE--ecCCCHHHHHHHHHHHHHHHHH
Confidence 9999999832 2368999 5888999999999999887764
No 283
>PRK05968 hypothetical protein; Provisional
Probab=99.68 E-value=1.2e-14 Score=146.87 Aligned_cols=289 Identities=15% Similarity=0.078 Sum_probs=174.1
Q ss_pred cccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCC
Q 011777 131 ATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYP 210 (477)
Q Consensus 131 ~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~ 210 (477)
...++.++...+|+++++++.+. +..++++||+.|+..++... ..++++||+..+.|++..........
T Consensus 56 ~Y~r~~~p~~~~le~~lA~l~g~--~~av~~~sG~~Ai~~al~al--~~~Gd~Vl~~~~~y~~t~~~~~~~~~------- 124 (389)
T PRK05968 56 IYSRGDNPTVRAFEEMLAKLEGA--EDARGFASGMAAISSTVLSF--VEPGDRIVAVRHVYPDAFRLFETILK------- 124 (389)
T ss_pred cccCCCChhHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHH--hCCCCEEEEeCCCchHHHHHHHHHHH-------
Confidence 34456678889999999999865 35667799999999888643 23567899988888764321111000
Q ss_pred CCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEE
Q 011777 211 IPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIA 290 (477)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~ 290 (477)
..|+....++. . | .+++++.+. ++++|++|.+.|..+ +...+++|.++|++||+++|+
T Consensus 125 --~~G~~v~~vd~------~-d----~~~l~~~i~-----~tklV~ie~pt~~~~----~~~dl~~i~~la~~~gi~viv 182 (389)
T PRK05968 125 --RMGVEVDYVDG------R-D----EEAVAKALP-----GAKLLYLESPTSWVF----ELQDVAALAALAKRHGVVTMI 182 (389)
T ss_pred --HcCceEEEeCC------C-C----HHHHHHhcc-----cCCEEEEECCCCCCC----cHHHHHHHHHHHHHcCCEEEE
Confidence 01222221110 0 1 366776653 456788886655544 334599999999999999999
Q ss_pred cCcccCccCCCCCCccccccCCCccee--eecccccC-c-cceEEEEeCHHHHHhhccccc-ccCCCCcHHHHHHHHHHH
Q 011777 291 DEVQTGFGRTGSHYWGFETQGVIPDIV--TMAKGIGN-G-LPLGAVVTTPEIANVMAQKIQ-FNTFGGNPVCSAGGLAVL 365 (477)
Q Consensus 291 DEv~~gfgr~G~~~~~~~~~gv~pDiv--t~sK~lg~-G-~pig~v~~~~~~~~~~~~~~~-~~t~~~~~~~~aaa~a~l 365 (477)
|+++..+.. . .. .. .|. |++ +++|.+++ | ...|++++++++++.+..... ......+++.++.++..|
T Consensus 183 D~a~a~~~~-~-~p--~~-~g~--Divv~S~tK~l~g~~~~~gG~i~~~~~~~~~l~~~~~~~~g~~~~~~~A~~~l~~L 255 (389)
T PRK05968 183 DNSWASPVF-Q-RP--IT-LGV--DLVIHSASKYLGGHSDTVAGVVAGSKEHIARINAEAYPYLGAKLSPFEAWLLLRGL 255 (389)
T ss_pred ECCCcchhc-c-Cc--hh-cCC--cEEEeeccccccCCCCeEEEEEEECHHHHHHHHHHHHHhCCCCCChHHHHHHHccc
Confidence 999863321 1 11 11 243 555 57799996 4 677888999988877654211 111334577777766666
Q ss_pred HhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeee-------------ccceeEEEEEeeCCCCCCccHHHHHHHHHH
Q 011777 366 RVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVR-------------GRGLMVGMELVTDRKEKTPAKAETAVLFEK 432 (477)
Q Consensus 366 ~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~-------------g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~ 432 (477)
+.+ +...++-.++.+++.+.|++ ++.+..+. +.|.++.+++.. .....++.+.
T Consensus 256 ~tl--~~r~~~~~~~a~~la~~L~~----~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~--------~~~~~~f~~~ 321 (389)
T PRK05968 256 RTL--PLRMKAHEASALEIARRLKA----HPVVERVCHPALANHPPAGLSGTSGLFSFIFRE--------GIDVRAFADA 321 (389)
T ss_pred CcH--HHHHHHHHHHHHHHHHHHHh----CCCccEEECCCCCCChHHhCCCCceEEEEEECC--------HHHHHHHHHh
Confidence 644 23344444455555555543 44333222 456677777731 2235677777
Q ss_pred HHHcCceeeccC-------------------------CCCCEEEEeCCCCCcHHHHHHHHHHHHHH
Q 011777 433 LRELGVLVGKGG-------------------------LHGNVFRIKPPMCFTKDDADFLVDALDYS 473 (477)
Q Consensus 433 l~~~Gv~v~~~~-------------------------~~~~~iRi~p~~~~t~e~i~~~l~~l~~~ 473 (477)
|...++.+.-|+ ...+.+|++..+..+++-++.+-++|+++
T Consensus 322 L~~~~~~~s~G~~~slv~p~~~~~~~~~~~~~~~~~gi~~~liR~SvGlE~~~dl~~dl~~al~~~ 387 (389)
T PRK05968 322 LKLFRLGVSWGGHESLVVPAEVVLQQKAQPNSAARFGVSPRSVRLHVGLEGTEALWADLEQALAAA 387 (389)
T ss_pred CCccEEecCCCCCCceeeeCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHHh
Confidence 766554332221 11468999988876655555555555543
No 284
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.67 E-value=2.8e-14 Score=142.54 Aligned_cols=236 Identities=18% Similarity=0.156 Sum_probs=151.8
Q ss_pred ccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCC
Q 011777 130 HATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKY 209 (477)
Q Consensus 130 ~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~ 209 (477)
+.++++.++...+|+++|+++.+ .+.++.++||++|+.+++.+. .++++||+....|++........ .
T Consensus 46 ~~Y~R~~~p~~~~le~~lA~leg--~~~~v~~~sG~aAi~~~l~~l---~~GD~VI~~~~~yg~~~~~~~~~-~------ 113 (364)
T PRK07269 46 FDYTRTKNPTRAKLEETLAAIES--ADYALATSSGMSAIVLAFSVF---PVGSKVVAVRDLYGGSFRWFNQQ-E------ 113 (364)
T ss_pred cceeCCCCccHHHHHHHHHHHhC--CCeEEEeCCHHHHHHHHHHHh---CCCCEEEEecCCcCchHHHHHHH-H------
Confidence 33456788889999999999984 468999999999999988532 35678998888876543211110 0
Q ss_pred CCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEE
Q 011777 210 PIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCI 289 (477)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI 289 (477)
+..++... +..| .+++++.++ +++++|++|..+++.|.+.. +++|.++|+++|+++|
T Consensus 114 --~~~~~~~~---------~~~d----~~~l~~~i~----~~TklV~lesP~NPtg~~~d----i~~I~~la~~~gi~vv 170 (364)
T PRK07269 114 --KEGRFHFT---------YANT----EEELIAAIE----EDTDIVYIETPTNPLMVEFD----IEKVAKLAHAKGAKVI 170 (364)
T ss_pred --hcCcEEEE---------ecCC----HHHHHHhcC----cCceEEEEECCCCCCCeeeC----HHHHHHHHHHcCCEEE
Confidence 00111111 1111 367877775 46788888888887787665 9999999999999999
Q ss_pred EcCcccCccCCCCCCccccccCCCcceee--ecccccC-c-cceEEEEe-CHHHHHhhcccccccCCCCcHHHHHHHHHH
Q 011777 290 ADEVQTGFGRTGSHYWGFETQGVIPDIVT--MAKGIGN-G-LPLGAVVT-TPEIANVMAQKIQFNTFGGNPVCSAGGLAV 364 (477)
Q Consensus 290 ~DEv~~gfgr~G~~~~~~~~~gv~pDivt--~sK~lg~-G-~pig~v~~-~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~ 364 (477)
+||++.. + .+ ....+...|+++ ++|.++| | .-.|++++ ++++.+.+...........+|+.++.++..
T Consensus 171 vD~t~~~----~--~~-~~pl~~gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~~~~~~G~~~s~~~a~l~~~~ 243 (364)
T PRK07269 171 VDNTFYS----P--IY-QRPIELGADIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFYNLNTTGAVLSPFDSYLLMRG 243 (364)
T ss_pred EECCCcc----c--cc-CCchhhCCcEEEecCceeccCCCcccceEEEeCcHHHHHHHHHHHHHhCCCCCHHHHHHHHcC
Confidence 9999641 1 11 122344567775 5699986 3 33477777 466776665322122234578877777776
Q ss_pred HHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceee--eccceeEEEEEe
Q 011777 365 LRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDV--RGRGLMVGMELV 413 (477)
Q Consensus 365 l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v--~g~g~~~~i~~~ 413 (477)
|+.+ +...++..++..++.+.| +.+|.+..+ ++.|.++.+++.
T Consensus 244 L~tL--~~r~~~~~~na~~~a~~L----~~~p~v~~v~ypg~gg~~sf~~~ 288 (364)
T PRK07269 244 LKTL--SLRMERSTANAQEVVAFL----KKSPAVKEVLYTGKGGMISFKVA 288 (364)
T ss_pred CCcH--HHHHHHHHHHHHHHHHHH----HhCCCccEEeCCCcCcEEEEEEC
Confidence 6643 233444455555555544 446644333 577888888873
No 285
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.67 E-value=7.7e-14 Score=141.34 Aligned_cols=217 Identities=13% Similarity=0.119 Sum_probs=137.0
Q ss_pred HHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccC-CCcc
Q 011777 237 AQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQG-VIPD 315 (477)
Q Consensus 237 ~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~g-v~pD 315 (477)
.+++++++. ..+..|++....+.++ ..+ +++|+++|++||+++++|++|+ +|..|...+.-+... -..|
T Consensus 209 ~d~l~~~~~----~~~plvii~g~S~~~~-~~d----l~~i~eia~~~gA~L~VD~AH~-~Gligg~~~~~~~~~~~~~D 278 (493)
T PRK13580 209 YDEIAALAR----EFKPLILVAGYSAYPR-RVN----FAKLREIADEVGAVLMVDMAHF-AGLVAGKVFTGDEDPVPHAD 278 (493)
T ss_pred HHHHHHHHh----hcCCEEEEeCccccCC-CcC----HHHHHHHHHHcCCEEEEECchh-hceeccccchhhcCCCCCCc
Confidence 477888776 2334444445444444 455 8999999999999999999997 544331121101101 1356
Q ss_pred ee--eecccccCccceEEEEeCHHHHHhhcccccccCCCCc-HHHHHHHHHHHHhhchh---hHHHHHHHHHHHHHHHHH
Q 011777 316 IV--TMAKGIGNGLPLGAVVTTPEIANVMAQKIQFNTFGGN-PVCSAGGLAVLRVIDKE---RRQAHCADVGSHLLGRLR 389 (477)
Q Consensus 316 iv--t~sK~lg~G~pig~v~~~~~~~~~~~~~~~~~t~~~~-~~~~aaa~a~l~~l~~~---~~~~~~~~~~~~l~~~L~ 389 (477)
++ |++|++.|. +.|++++++++.+.+.... ...|+++ +..++|+..++..+.++ ++.+++.++.++|++.|.
T Consensus 279 ~vtgT~hKaL~GP-~GG~I~~~~~l~~~L~~a~-P~i~gg~l~p~iAA~avAl~e~~~~ef~~y~~~l~~Na~~La~~L~ 356 (493)
T PRK13580 279 IVTTTTHKTLRGP-RGGLVLAKKEYADAVDKGC-PLVLGGPLPHVMAAKAVALAEARTPEFQKYAQQVVDNARALAEGFL 356 (493)
T ss_pred EEEeCChhhccCC-CeEEEEecHHHHHHHhhCC-CcccCCCccHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHH
Confidence 66 567999542 2389999999988874322 2333332 33444444456555432 367888899999999887
Q ss_pred HHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeecc----CC----CCCEEEEeCCC----C
Q 011777 390 TLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKG----GL----HGNVFRIKPPM----C 457 (477)
Q Consensus 390 ~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~----~~----~~~~iRi~p~~----~ 457 (477)
+. .+.++.. .....++.+++.+. ......+.+.|.+.||++.+. .. ....|||+++. .
T Consensus 357 ~~--G~~vv~g-gTdshIV~V~lg~~-------~~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLRIg~~A~ttrg 426 (493)
T PRK13580 357 KR--GARLVTG-GTDNHLVLIDVTSF-------GLTGRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIRLGTPALTTLG 426 (493)
T ss_pred hc--CCCccCC-CCCCCEEEEEeCCH-------HHHHHHHHHHHHHCCeEEccccCCCCCCCCCCCceEEeccchhhhcC
Confidence 75 2332211 12356677776321 112346677999999998643 11 14679999888 5
Q ss_pred CcHHHHHHHHHHHHHHHh
Q 011777 458 FTKDDADFLVDALDYSMS 475 (477)
Q Consensus 458 ~t~e~i~~~l~~l~~~l~ 475 (477)
++++|++++++.|.++++
T Consensus 427 ~teedi~~iad~l~~~l~ 444 (493)
T PRK13580 427 MGSDEMDEVAELIVKVLS 444 (493)
T ss_pred CCHHHHHHHHHHHHHHHH
Confidence 579999999999998875
No 286
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.67 E-value=4.7e-15 Score=140.82 Aligned_cols=350 Identities=14% Similarity=0.089 Sum_probs=216.6
Q ss_pred EEeeeccEEEeCCCCEEEeecCCcccccCCC-CCHHHHHHHHHHHhhcccccc-----ccCChHHHHHHHHHHhhCCCCC
Q 011777 82 IVEGKMQYLFDENGRRYLDAFAGIVTVSCGH-CHPDVLNAIFEQSKLLQHATT-----IYLHHAIADFAEALASKMPGNL 155 (477)
Q Consensus 82 ~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh-~~p~v~~Av~~~l~~~~~~~~-----~~~~~~~~~l~~~La~~~~~~~ 155 (477)
+...-+..+ ..||+.+++|.+... ||. .++++.+.+...++++..+.. .+.-....++.++|+++++..
T Consensus 81 ~e~~~~~~~-~i~G~~~~N~aS~Nf---L~l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~G~E- 155 (467)
T KOG1358|consen 81 LESVMLPHV-TIDGKDVLNFASANF---LGLIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFMGTE- 155 (467)
T ss_pred cccccCCce-EecCceeecccchhh---hhhcccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhhCCc-
Confidence 333333443 589999999987654 443 478999999999998643221 233566789999999999652
Q ss_pred CEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHH
Q 011777 156 KVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAAR 235 (477)
Q Consensus 156 ~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (477)
+.+ +-+-|-.+++.++. ++.++.+|+..+-.-+-...-.+.++...... |..++
T Consensus 156 ~ai-vYs~gF~ti~S~ip---afsKrGDIi~~de~~nfaIq~GlqlSRS~i~~--------------------Fkhnd-- 209 (467)
T KOG1358|consen 156 DAI-VYSYGFSTIESAIP---AFSKRGDIIFVDEAVNFAIQKGLQLSRSTISY--------------------FKHND-- 209 (467)
T ss_pred cee-eeccccchhhhcch---hhhccCcEEEEehhhhHHHHHHHhhhhheeEE--------------------ecCCC--
Confidence 344 44455566666666 56678888876655443333323222211111 11111
Q ss_pred HHHHHHHHHhcc------CCC---CeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCcc---CCCCC
Q 011777 236 YAQDLQDHIDFG------TSG---KVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFG---RTGSH 303 (477)
Q Consensus 236 ~~~~le~~i~~~------~~~---~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfg---r~G~~ 303 (477)
++++|.++... ++. ....+++|.+.-+.|.+.| |++|.++..||..-+|.||.++ || ++| +
T Consensus 210 -m~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~p----l~~iv~lk~Kyk~RvildEs~S-fG~lg~~G-r 282 (467)
T KOG1358|consen 210 -MEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICP----LPEIVKLKNKYKFRVILDESLS-FGVLGKTG-R 282 (467)
T ss_pred -HHHHHHhccCcchhhhhccccccceEEEEEEeeccCCCcccc----cHHHHHHHhhheEEEEEecccc-cccccccC-c
Confidence 35555544311 111 2468899999999999998 9999999999999999999987 54 555 2
Q ss_pred CccccccCCC---cceeee--cccccC-ccceEEEEeCHHHHHhhcccccccCCC--CcHHHHHHHHHHHHhhch-hhHH
Q 011777 304 YWGFETQGVI---PDIVTM--AKGIGN-GLPLGAVVTTPEIANVMAQKIQFNTFG--GNPVCSAGGLAVLRVIDK-ERRQ 374 (477)
Q Consensus 304 ~~~~~~~gv~---pDivt~--sK~lg~-G~pig~v~~~~~~~~~~~~~~~~~t~~--~~~~~~aaa~a~l~~l~~-~~~~ 374 (477)
.-.+|+++. .|+++. +-+++. | |+++++.-+.+.-+-...+..|+ .+|....||..++++++. .+..
T Consensus 283 -GvteH~~v~~~~iDiv~~sm~~alas~G---gFc~G~~~i~~hQrLSg~~Y~fSAslPp~la~aa~~ai~i~~~~p~~~ 358 (467)
T KOG1358|consen 283 -GVTEHFGVPITDIDIVTASMETALASGG---GFCAGKSFIADHQRLSGSGYCFSASLPPYLAGAAIKAILIEEWNPEIV 358 (467)
T ss_pred -cccccCCCCccceeeeeecccccccccC---ceeecceeeEeeeeccccceeeeccCchhhhhhHHHHHHHHhhCcchh
Confidence 234788775 466654 456663 4 66666544433222122333443 457888888888888765 3455
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccC--------CC
Q 011777 375 AHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGG--------LH 446 (477)
Q Consensus 375 ~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~--------~~ 446 (477)
+.++.....+...|+.. ......-...+.++.+.+.....+.+-.....+++++.+..+|+++.... .-
T Consensus 359 ~~L~~k~~~~H~~l~~~---s~~~v~~~~~SPi~hl~l~~~~~s~e~e~~lL~eivd~~i~~~~ll~~a~~~~~~e~~~~ 435 (467)
T KOG1358|consen 359 QPLRAKVAKFHAALSSN---SGFIVSGSPESPIIHLQLERSYGSREKEEKLLEEIVDKCIAEGVLLTRAKYLEKLERCPI 435 (467)
T ss_pred hhhhccccccchhhhcC---CceEEecCcCCceeeeeecccccchHHHHHHHHHHHHHHHhhcceehhhhhhhhcccCCC
Confidence 55666555555555441 11222222334555555544333333333445778888877788875431 11
Q ss_pred CCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 447 GNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 447 ~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
.-.||++.+..+++||++++.+.++++...
T Consensus 436 ~pSiri~~~a~~seeel~ra~~~ik~~~~~ 465 (467)
T KOG1358|consen 436 PPSIRICVSAGMSEEELERAAELIKEVASA 465 (467)
T ss_pred CCcEEEEEeCCCCHHHHHHHHHHHHHHHHh
Confidence 246999999999999999999999987654
No 287
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.66 E-value=5e-14 Score=142.93 Aligned_cols=220 Identities=16% Similarity=0.090 Sum_probs=142.0
Q ss_pred ccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCC
Q 011777 130 HATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKY 209 (477)
Q Consensus 130 ~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~ 209 (477)
+...++.++...+|++.|+++.+. +..+.++||+.|+.++++.. ..++++||+..+.| +.+.......
T Consensus 57 ~~y~r~~~p~~~~le~~lA~l~g~--~~~i~~~sG~~Al~~~l~~l--l~~Gd~Viv~~~~y-~~t~~~~~~~------- 124 (403)
T PRK07503 57 HFYSRISNPTLALLEQRMASLEGG--EAAVALASGMGAITATLWTL--LRPGDEVIVDQTLY-GCTFAFLHHG------- 124 (403)
T ss_pred ceeeCCCCchHHHHHHHHHHHhCC--CcEEEEcCHHHHHHHHHHHH--cCCCCEEEEccCcc-chHHHHHHHH-------
Confidence 334567788899999999999865 44678889999999998754 34567788877666 3322211100
Q ss_pred CCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEE
Q 011777 210 PIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCI 289 (477)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI 289 (477)
....|+....++. . | .+++++.++ +++++|++|.++++.|.+.+ +++|.++|++||+++|
T Consensus 125 -~~~~G~~v~~vd~------~-d----~~~l~~~i~----~~tklV~le~p~NPtG~~~d----i~~I~~la~~~gi~lI 184 (403)
T PRK07503 125 -LGEFGVTVRHVDL------T-D----PAALKAAIS----DKTRMVYFETPANPNMRLVD----IAAVAEIAHGAGAKVV 184 (403)
T ss_pred -HhhCCEEEEEeCC------C-C----HHHHHHhcC----ccCcEEEEeCCCCCCCeeeC----HHHHHHHHHHcCCEEE
Confidence 0011333222211 0 1 467877775 36788888888888887776 8999999999999999
Q ss_pred EcCcccCccCCCCCCccccccCCCccee--eecccccC-c-cceEEEEeCHHHHHhhccc--ccccCCCCcHHHHHHHHH
Q 011777 290 ADEVQTGFGRTGSHYWGFETQGVIPDIV--TMAKGIGN-G-LPLGAVVTTPEIANVMAQK--IQFNTFGGNPVCSAGGLA 363 (477)
Q Consensus 290 ~DEv~~gfgr~G~~~~~~~~~gv~pDiv--t~sK~lg~-G-~pig~v~~~~~~~~~~~~~--~~~~t~~~~~~~~aaa~a 363 (477)
+|++|... ..+ ... +...|++ +++|.+++ | .+.|+++.++++.+.++.. ........+++.++.++.
T Consensus 185 vD~a~a~~-~~~-~~l-----~~g~Di~v~S~tK~l~g~gd~~gG~v~~~~~l~~~l~~~~~~~~~g~~~s~~~a~l~l~ 257 (403)
T PRK07503 185 VDNTYCTP-YLQ-RPL-----ELGADLVVHSATKYLGGHGDITAGLVVGGKALADRIRLEGLKDMTGAVMSPFDAFLLMR 257 (403)
T ss_pred EECCCccc-ccC-Cch-----hhCCCEEEccccccccCCCceeEEEEEcCHHHHHHHHhhhHHhCcCCCCCHHHHHHHHc
Confidence 99999732 222 221 2234655 57899996 5 7889999999988877532 222234567777777766
Q ss_pred HHHhhchhhHHHHHHHHHHHHHHHHHH
Q 011777 364 VLRVIDKERRQAHCADVGSHLLGRLRT 390 (477)
Q Consensus 364 ~l~~l~~~~~~~~~~~~~~~l~~~L~~ 390 (477)
.|+.+. ...++..++...+.+.|.+
T Consensus 258 ~L~tl~--~r~~~~~~na~~~a~~L~~ 282 (403)
T PRK07503 258 GLKTLA--LRMDRHCASAQAVAEWLAR 282 (403)
T ss_pred CcchHH--HHHHHHHHHHHHHHHHHHh
Confidence 665442 2233334455555555543
No 288
>PRK02769 histidine decarboxylase; Provisional
Probab=99.66 E-value=1.2e-13 Score=138.52 Aligned_cols=287 Identities=19% Similarity=0.206 Sum_probs=179.0
Q ss_pred hHHHHHHHHHHhhCCCCCCE--EEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCC
Q 011777 138 HAIADFAEALASKMPGNLKV--VYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGE 215 (477)
Q Consensus 138 ~~~~~l~~~La~~~~~~~~~--v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~ 215 (477)
....+..++++++++.+.+. .+||+||||||..|+..+|...+++.|++ ...-|.....+....+..
T Consensus 65 ~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~-s~~~H~Sv~ka~~~lg~~---------- 133 (380)
T PRK02769 65 DFERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLARELFPDGTLYY-SKDTHYSVSKIARLLRIK---------- 133 (380)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEe-CCCceehHHHHHHHcCCC----------
Confidence 44567888888888754333 58999999999999998887544444444 444554433322222211
Q ss_pred eeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhC---cEEEEcC
Q 011777 216 IHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAG---GVCIADE 292 (477)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~g---illI~DE 292 (477)
...++... .+..+ .++|+++++.. ..++.+|++.-.+++.|.+.| +++|.++|++|| +++++|.
T Consensus 134 ~~~V~~~~--~g~id------~~~L~~~i~~~-~~~t~lvv~t~gtt~tG~idp----i~~I~~i~~~~g~~~~~lHVDa 200 (380)
T PRK02769 134 SRVITSLP--NGEID------YDDLISKIKEN-KNQPPIIFANIGTTMTGAIDN----IKEIQEILKKIGIDDYYIHADA 200 (380)
T ss_pred CceeccCC--CCcCc------HHHHHHHHHhC-CCCcEEEEEEeCCCCCcccCC----HHHHHHHHHHhCCCceEEEEEe
Confidence 11122111 11122 57888888733 335788888888899998888 999999999998 6999999
Q ss_pred cccCccCC---CCCCccccccCCCcceeeec--ccccCccceEEEEeCHHHHHhhcccc-----cccCCC--CcHHHHHH
Q 011777 293 VQTGFGRT---GSHYWGFETQGVIPDIVTMA--KGIGNGLPLGAVVTTPEIANVMAQKI-----QFNTFG--GNPVCSAG 360 (477)
Q Consensus 293 v~~gfgr~---G~~~~~~~~~gv~pDivt~s--K~lg~G~pig~v~~~~~~~~~~~~~~-----~~~t~~--~~~~~~aa 360 (477)
+|.|+-.. ....+ +... ..|.+++| |.+++..+.|+++.+++..+.+.... ...|+. -|....++
T Consensus 201 A~gg~~~p~~~~~~~~--d~~~-~vDsis~s~HK~~~~P~g~G~l~~r~~~~~~~~~~~~yl~~~d~t~~GSR~g~~~l~ 277 (380)
T PRK02769 201 ALSGMILPFVNNPPPF--SFAD-GIDSIAISGHKFIGSPMPCGIVLAKKKYVERISVDVDYIGSRDQTISGSRNGHTALL 277 (380)
T ss_pred cccceeecccCccccC--CccC-CCCEEEECCcccCCCCCCcEEEEEehhhhhhcccCccccCCCCCCccCCCCcHHHHH
Confidence 99875210 00012 2112 56888876 87776789999999988766553210 111222 34456667
Q ss_pred HHHHHHhhchh---hHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcC
Q 011777 361 GLAVLRVIDKE---RRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELG 437 (477)
Q Consensus 361 a~a~l~~l~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~G 437 (477)
..++|+.+..+ +..++..++.+++.++|++. +...-..+....+. |.. |. ..+. +|
T Consensus 278 lw~aL~~lg~~G~~~~~~~~~~la~~l~~~L~~~----g~~~~~~p~~~~v~--f~~------~~----~~~~-----~~ 336 (380)
T PRK02769 278 LWAAIRSLGSKGLRQRVQHCLDMAQYAVDRLQAN----GIPAWRNPNSITVV--FPC------PS----ERIW-----KK 336 (380)
T ss_pred HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhC----CCEEEcCCCceEEE--EcC------CC----HHHH-----hC
Confidence 77788777654 44566777777888877653 22212222333333 321 21 1121 56
Q ss_pred ceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHHHh
Q 011777 438 VLVGKGGLHGNVFRIKPPMCFTKDDADFLVDALDYSMS 475 (477)
Q Consensus 438 v~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~ 475 (477)
..+.+. ++.+|+.....++++.||++++-|...+.
T Consensus 337 w~l~~~---~~~~hi~~~~~~~~~~~~~f~~dl~~~~~ 371 (380)
T PRK02769 337 WHLATS---GNQAHIITMPHHNKQQIDSLIDELIFDLK 371 (380)
T ss_pred eeEccc---CCEEEEEECCCCCHHHHHHHHHHHHHHHh
Confidence 655543 35788887788899999999999987654
No 289
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.66 E-value=6e-14 Score=142.14 Aligned_cols=238 Identities=20% Similarity=0.160 Sum_probs=152.8
Q ss_pred cccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCC
Q 011777 131 ATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYP 210 (477)
Q Consensus 131 ~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~ 210 (477)
...++.++...+|+++|+++.+. +..++++||++|+..++.... .+++.|++..+.|++..........
T Consensus 53 ~y~R~~~p~~~~Le~~lA~l~g~--~~~v~~~sG~~Ai~~~l~all--~pGD~Vvv~~p~Y~~t~~~~~~~~~------- 121 (405)
T PRK08776 53 DYTRSGNPTRDLLGEALAELEGG--AGGVITATGMGAINLVLNALL--QPGDTLVVPHDAYGGSWRLFNALAK------- 121 (405)
T ss_pred cccCCCChHHHHHHHHHHHHhCC--CceEEEcCHHHHHHHHHHHHh--CCCCEEEEccCCchHHHHHHHHHHH-------
Confidence 34567788889999999998765 345678889999998887553 3567899888898763221111100
Q ss_pred CCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEE
Q 011777 211 IPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIA 290 (477)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~ 290 (477)
..++..+..+. . | .+++++.++ +++++|+++..+|++|.+.. +++|.++|++||+++|+
T Consensus 122 --~~g~~v~~v~~------~-d----~~~l~~~i~----~~tklV~l~~P~NPtG~v~d----l~~I~~la~~~gi~vIv 180 (405)
T PRK08776 122 --KGHFALITADL------T-D----PRSLADALA----QSPKLVLIETPSNPLLRITD----LRFVIEAAHKVGALTVV 180 (405)
T ss_pred --hcCcEEEEECC------C-C----HHHHHHhcC----cCCeEEEEECCCCCCCccCC----HHHHHHHHHHcCCEEEE
Confidence 01222222211 0 1 367777765 35677888877778887654 89999999999999999
Q ss_pred cCcccCccCCCCCCccccccCCCccee--eecccccC--ccceEEEEe-CHHHHHhhcccccccCCCCcHHHHHHHHHHH
Q 011777 291 DEVQTGFGRTGSHYWGFETQGVIPDIV--TMAKGIGN--GLPLGAVVT-TPEIANVMAQKIQFNTFGGNPVCSAGGLAVL 365 (477)
Q Consensus 291 DEv~~gfgr~G~~~~~~~~~gv~pDiv--t~sK~lg~--G~pig~v~~-~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l 365 (477)
||+|..-.. ...++ + ..|++ +.+|.++| ++..|++++ ++++.+.+........++.+++.+.+.+..+
T Consensus 181 D~a~a~~~~----~~pl~-~--gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~~~~~~g~~~s~~~a~l~~~gl 253 (405)
T PRK08776 181 DNTFLSPAL----QKPLE-F--GADLVLHSTTKYINGHSDVVGGAVVARDAELHQQLVWWANALGLTGSPFDAFLTLRGL 253 (405)
T ss_pred ECCCccccc----CCccc-c--cCCEEEecCceeecCCCCceEEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHhhh
Confidence 999873211 11112 2 34666 46699985 367788877 4677776654333334456888888887777
Q ss_pred HhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCce------------------eeeccceeEEEEEe
Q 011777 366 RVIDKERRQAHCADVGSHLLGRLRTLQERHDIIG------------------DVRGRGLMVGMELV 413 (477)
Q Consensus 366 ~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~------------------~v~g~g~~~~i~~~ 413 (477)
+.+ +...++..++...+.+.|++ +|.+. ...|.|.|+.+++.
T Consensus 254 ~tl--~~r~~~~~~na~~la~~L~~----~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~ 313 (405)
T PRK08776 254 RTL--DARLRVHQENADAIAALLDG----HAAVNQVYYPGLASHPGHALAARQQKGFGAMLSFELE 313 (405)
T ss_pred CcH--HHHHHHHHHHHHHHHHHHHc----CCCeeEEECCCCCCCcCHHHHHhcCCCCceEEEEEEc
Confidence 654 33455666666666665553 33221 12467888899884
No 290
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.66 E-value=4.4e-14 Score=141.98 Aligned_cols=239 Identities=18% Similarity=0.100 Sum_probs=150.1
Q ss_pred ccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCC
Q 011777 130 HATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKY 209 (477)
Q Consensus 130 ~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~ 209 (477)
+.++++.++...+|+++|+++.+ .+.+++++||++|+..++.... .+++.|++..+.|.+.........
T Consensus 45 ~~Y~R~~npt~~~Le~~lA~leg--~e~ivvt~gg~~Ai~~~l~all--~~Gd~Il~~~~~y~~~~~~~~~~~------- 113 (388)
T PRK08861 45 YDYTRSGNPNRGLLEQTLSELES--GKGAVVTNCGTSALNLWVSALL--GPDDLIVAPHDCYGGTYRLFNTRA------- 113 (388)
T ss_pred ccccCCCCchHHHHHHHHHHHhC--CCeEEEECCHHHHHHHHHHHHc--CCCCEEEEcCCchHHHHHHHHHHH-------
Confidence 34557788999999999999985 4789999999999999997653 366788888888865322111110
Q ss_pred CCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEE
Q 011777 210 PIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCI 289 (477)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI 289 (477)
...++....++. . | .++++++++ +++++|++|.++|++|.+.+ +++|.++|+++|+++|
T Consensus 114 --~~~gi~v~~vd~-----~--d----~e~l~~~i~----~~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~vI 172 (388)
T PRK08861 114 --NKGDFKVQFVDQ-----S--D----AAALDAALA----KKPKLILLETPSNPLVRVVD----IAELCQKAKAVGALVA 172 (388)
T ss_pred --hcCCeEEEEECC-----C--C----HHHHHHhcC----cCCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEE
Confidence 001233222211 0 1 467777765 36788888887888887776 8999999999999999
Q ss_pred EcCcccCccCCCCCCccccccCCCcceee--ecccccC--ccceEEEEeC-HHHHHhhcccccccCCCCcHHHHHHHHHH
Q 011777 290 ADEVQTGFGRTGSHYWGFETQGVIPDIVT--MAKGIGN--GLPLGAVVTT-PEIANVMAQKIQFNTFGGNPVCSAGGLAV 364 (477)
Q Consensus 290 ~DEv~~gfgr~G~~~~~~~~~gv~pDivt--~sK~lg~--G~pig~v~~~-~~~~~~~~~~~~~~t~~~~~~~~aaa~a~ 364 (477)
+||+|..... . .. .....|+++ ++|.++| +...|+++++ +++.+.+...........+|+.+...+..
T Consensus 173 vDea~~~~~~-~-~p-----l~~GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rg 245 (388)
T PRK08861 173 VDNTFLTPVL-Q-KP-----LELGADFVIHSTTKYINGHSDVIGGVLITKTKEHAEELAWWGNCIGATGTPFDSYMTLRG 245 (388)
T ss_pred EECCcccccc-C-CC-----cccCCCEEEeecceeccCCCcceeEEEEecHHHHHHHHHHHHhccCCCCChHHHHHHHhc
Confidence 9999863210 1 11 123356664 6699986 3667888775 55666554322222334467766655555
Q ss_pred HHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCce------------------eeeccceeEEEEEe
Q 011777 365 LRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIG------------------DVRGRGLMVGMELV 413 (477)
Q Consensus 365 l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~------------------~v~g~g~~~~i~~~ 413 (477)
|+.+. -..++..++...+.+.|++ +|.+. ...|.|.++.+++.
T Consensus 246 l~Tl~--lR~~~~~~~a~~~a~~L~~----~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~~ 306 (388)
T PRK08861 246 IRTLG--ARMRVHEESAQQILAYLQT----QSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFA 306 (388)
T ss_pred CCCHH--HHHHHHHHHHHHHHHHHHh----CCCeeEEECCCCCCCchHHHHHHhCCCCCceEEEEeC
Confidence 54332 1234444444455454443 33221 12467888888884
No 291
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.65 E-value=6.4e-15 Score=150.21 Aligned_cols=166 Identities=19% Similarity=0.165 Sum_probs=118.1
Q ss_pred ccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCC
Q 011777 132 TTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPI 211 (477)
Q Consensus 132 ~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~ 211 (477)
.+++.++...+|+++|+++.+. +.+++++||++|+..+++.... ++++||+..+.|+|..........
T Consensus 51 ysr~~~p~~~~le~~lA~l~g~--~~~v~~~sG~~Ai~~al~~l~~--~Gd~Vl~~~~~y~~t~~~~~~~~~-------- 118 (418)
T TIGR01326 51 YSRLMNPTTDVLEQRIAALEGG--VAALAVASGQAAITYAILNLAQ--AGDNIVSSSYLYGGTYNLFKHTLK-------- 118 (418)
T ss_pred eECCCChhHHHHHHHHHHHhCC--CeEEEEccHHHHHHHHHHHHhC--CCCEEEEECCCcHHHHHHHHHHHH--------
Confidence 4567788899999999999864 6789999999999999986543 567899988888764322111000
Q ss_pred CCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEc
Q 011777 212 PQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIAD 291 (477)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~D 291 (477)
..|+....++. + | .++++++++ +++++|++|.++|++|.+.+ +++|.++|++||+++|+|
T Consensus 119 -~~G~~v~~v~~------~-d----~~~l~~~l~----~~t~~V~le~p~NPtg~v~d----l~~I~~la~~~~i~livD 178 (418)
T TIGR01326 119 -RLGIEVRFVDP------D-D----PEEFEKAID----ENTKAVFAETIGNPAINVPD----IEAIAEVAHAHGVPLIVD 178 (418)
T ss_pred -HcCcEEEEECC------C-C----HHHHHHhcC----cCCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEE
Confidence 01222222221 0 1 477887775 46788999988888887776 899999999999999999
Q ss_pred CcccCccCCCCCCccccccCCCccee--eecccccC-ccceEEEEeCH
Q 011777 292 EVQTGFGRTGSHYWGFETQGVIPDIV--TMAKGIGN-GLPLGAVVTTP 336 (477)
Q Consensus 292 Ev~~gfgr~G~~~~~~~~~gv~pDiv--t~sK~lg~-G~pig~v~~~~ 336 (477)
|+|.. +... ......+|++ +++|.+++ |+++|++++++
T Consensus 179 ~t~~~-~~~~------~~l~~g~Divv~S~sK~l~g~G~~lGg~v~~~ 219 (418)
T TIGR01326 179 NTFAT-PYLC------RPIDHGADIVVHSATKYIGGHGTAIGGVIVDG 219 (418)
T ss_pred CCCch-hhcC------CchhcCCeEEEECccccccCCccceEEEEEec
Confidence 99862 2111 1122345766 68899997 89999998864
No 292
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.65 E-value=8.4e-14 Score=140.64 Aligned_cols=288 Identities=16% Similarity=0.113 Sum_probs=171.3
Q ss_pred ccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCC
Q 011777 132 TTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPI 211 (477)
Q Consensus 132 ~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~ 211 (477)
...+.++...+|+++|+++.+.. ..+.++||++|+.++++... .++++||+..+.|.+.........
T Consensus 55 Y~r~~~p~~~~Le~~lA~~~g~~--~~i~~~sG~~Ai~~~l~all--~~Gd~Vl~~~~~y~~t~~~~~~~~--------- 121 (388)
T PRK07811 55 YARTGNPTRTALEEQLAALEGGA--YGRAFSSGMAATDCLLRAVL--RPGDHIVIPNDAYGGTFRLIDKVF--------- 121 (388)
T ss_pred ccCCCCccHHHHHHHHHHHhCCC--ceEEeCCHHHHHHHHHHHHh--CCCCEEEEcCCCchHHHHHHHHhC---------
Confidence 34566788899999999998653 45666889999999998663 356789998888865422211110
Q ss_pred CCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEc
Q 011777 212 PQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIAD 291 (477)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~D 291 (477)
...++.....+. . | .+++++.++ +++++|++|..+++.|.+.+ +++|.++|++||+++|+|
T Consensus 122 ~~~gi~~~~~d~------~-d----~e~l~~~i~----~~tklV~ie~p~NPtg~~~d----l~~I~~la~~~gi~lIvD 182 (388)
T PRK07811 122 TRWGVEYTPVDL------S-D----LDAVRAAIT----PRTKLIWVETPTNPLLSITD----IAALAELAHDAGAKVVVD 182 (388)
T ss_pred cCCCeEEEEeCC------C-C----HHHHHHhcC----cCCeEEEEECCCCCcceecC----HHHHHHHHHHcCCEEEEE
Confidence 001222221111 0 1 477777775 36788988887777786665 999999999999999999
Q ss_pred CcccCccCCCCCCccccccCCCccee--eecccccC-c-cceEEEEeC-HHHHHhhcccccccCCCCcHHHHHHHHHHHH
Q 011777 292 EVQTGFGRTGSHYWGFETQGVIPDIV--TMAKGIGN-G-LPLGAVVTT-PEIANVMAQKIQFNTFGGNPVCSAGGLAVLR 366 (477)
Q Consensus 292 Ev~~gfgr~G~~~~~~~~~gv~pDiv--t~sK~lg~-G-~pig~v~~~-~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~ 366 (477)
|+|... ..+ ... +...|++ +++|.+++ | ...|+++++ +++.+.+...........++..+..++..|+
T Consensus 183 ~a~a~~-~~~-~p~-----~~gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~~L~ 255 (388)
T PRK07811 183 NTFASP-YLQ-QPL-----ALGADVVVHSTTKYIGGHSDVVGGALVTNDEELDEAFAFLQNGAGAVPGPFDAYLTLRGLK 255 (388)
T ss_pred CCCCcc-ccC-Cch-----hhCCcEEEecCceeecCCCCcEEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHhccC
Confidence 998632 212 111 2234655 56799996 3 567888875 6666655433222223345666555555554
Q ss_pred hhchhhHHHHHHHHHHHHHHHHHHHHHhCCCce------------------eeeccceeEEEEEeeCCCCCCccHHHHHH
Q 011777 367 VIDKERRQAHCADVGSHLLGRLRTLQERHDIIG------------------DVRGRGLMVGMELVTDRKEKTPAKAETAV 428 (477)
Q Consensus 367 ~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~------------------~v~g~g~~~~i~~~~~~~~~~~~~~~~~~ 428 (477)
.+ +...++..++...+.+.|++ ++.+. ...|.|.++.+++..+ ...+.+
T Consensus 256 tl--~~R~~~~~~na~~la~~L~~----~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~-------~~~~~~ 322 (388)
T PRK07811 256 TL--AVRMDRHSENAEAVAEFLAG----HPEVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLAGG-------EEAARD 322 (388)
T ss_pred cH--HHHHHHHHHHHHHHHHHHHh----CCCeeEEECCCCCCCchHHHHHHhcCCCCceEEEEeCCC-------HHHHHH
Confidence 32 23344555566666666554 33221 1235688889988421 122344
Q ss_pred HHHHHHH--cCc--------eeecc------------CCCCCEEEEeCCCCCcHHHHHHHHHHHHHHHh
Q 011777 429 LFEKLRE--LGV--------LVGKG------------GLHGNVFRIKPPMCFTKDDADFLVDALDYSMS 475 (477)
Q Consensus 429 ~~~~l~~--~Gv--------~v~~~------------~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~ 475 (477)
+.+.|.= .|. +..|. |..++.|||+..+. |.+.+++-|++++.
T Consensus 323 f~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~gi~~~liR~svGlE----~~~dl~~dl~~al~ 387 (388)
T PRK07811 323 FCARTKVFTLAESLGGVESLIEHPSAMTHASTAGSQLEVPDDLVRLSVGIE----DVADLLADLEQALG 387 (388)
T ss_pred HHHhCCcceeeccCCCCcceEeCCcccCcccCCHhhcCCCCCEEEEEeCCC----CHHHHHHHHHHHhh
Confidence 5554431 111 11110 11246899987664 55566666666654
No 293
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.65 E-value=4.8e-14 Score=142.09 Aligned_cols=217 Identities=16% Similarity=0.075 Sum_probs=139.1
Q ss_pred ccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCC
Q 011777 132 TTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPI 211 (477)
Q Consensus 132 ~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~ 211 (477)
+.++.++...+|+++++++.+. +.+++++||++|+..++.... .+++.|++..+.|++.........
T Consensus 47 y~r~~np~~~~lE~~lA~l~g~--~~~l~~~sG~~Ai~~~l~~ll--~~GD~Vlv~~~~y~~~~~~~~~~~--------- 113 (385)
T PRK08574 47 YSREENPTLRPLEEALAKLEGG--VDALAFNSGMAAISTLFFSLL--KAGDRVVLPMEAYGTTLRLLKSLE--------- 113 (385)
T ss_pred EECCCCccHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHHh--CCCCEEEEcCCCchhHHHHHHHhh---------
Confidence 4466788899999999999864 567888999999999987543 356788888888876543221110
Q ss_pred CCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEc
Q 011777 212 PQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIAD 291 (477)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~D 291 (477)
..++...... . + .++++++++ +.++++|++|.++++.|.+.+ +++|.++|+++|+++|+|
T Consensus 114 -~~g~~v~~~~------~--d----~~~l~~~i~---~~~tklV~ie~p~NPtG~v~d----l~~I~~la~~~gi~livD 173 (385)
T PRK08574 114 -KFGVKVVLAY------P--S----TEDIIEAIK---EGRTKLVFIETMTNPTLKVID----VPEVAKAAKELGAILVVD 173 (385)
T ss_pred -ccCcEEEEEC------C--C----HHHHHHhcC---ccCceEEEEECCCCCCCEecC----HHHHHHHHHHcCCEEEEE
Confidence 0122211100 0 1 367777775 226789999998888887776 899999999999999999
Q ss_pred CcccCccCCCCCCccccccCCCccee--eecccccC-ccce-EEEEe-CHHHHHhhcccccccCCCCcHHHHHHHHHHHH
Q 011777 292 EVQTGFGRTGSHYWGFETQGVIPDIV--TMAKGIGN-GLPL-GAVVT-TPEIANVMAQKIQFNTFGGNPVCSAGGLAVLR 366 (477)
Q Consensus 292 Ev~~gfgr~G~~~~~~~~~gv~pDiv--t~sK~lg~-G~pi-g~v~~-~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~ 366 (477)
++++ .+... . .. ..|. |++ +++|.++| |-.+ |++++ ++++.+.+.......+...+|+.++.++..|+
T Consensus 174 ~t~a-~~~~~-~--~l-~~Ga--Divv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~~~~g~~~~p~~a~l~l~~l~ 246 (385)
T PRK08574 174 NTFA-TPLLY-R--PL-RHGA--DFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEWRRRLGTIMQPFEAYLVLRGLK 246 (385)
T ss_pred CCCC-ccccC-C--hh-hhCC--cEEEeeCceeecCCCCceeEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHcccC
Confidence 9985 21111 1 11 1343 555 57899986 5443 64555 67777766533222233445776666666665
Q ss_pred hhchhhHHHHHHHHHHHHHHHHHH
Q 011777 367 VIDKERRQAHCADVGSHLLGRLRT 390 (477)
Q Consensus 367 ~l~~~~~~~~~~~~~~~l~~~L~~ 390 (477)
.+. ...++..++..++.+.|++
T Consensus 247 tL~--~R~~~~~~na~~la~~L~~ 268 (385)
T PRK08574 247 TLE--VRFERQCRNAMAIAEFLSE 268 (385)
T ss_pred cHH--HHHHHHHHHHHHHHHHHHc
Confidence 442 2344445555566555543
No 294
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.64 E-value=1.5e-14 Score=139.79 Aligned_cols=309 Identities=19% Similarity=0.181 Sum_probs=187.1
Q ss_pred CCCHHHHHHHHHHHhhccccc--c---ccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEE
Q 011777 112 HCHPDVLNAIFEQSKLLQHAT--T---IYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIA 186 (477)
Q Consensus 112 h~~p~v~~Av~~~l~~~~~~~--~---~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~ 186 (477)
.|++.+.+++.. ..+.. + .+......++.+..+++++.. +-+.| +-|-..|..-+- ..-++...|+
T Consensus 155 ~ca~~~~~~~~k----ygl~~css~~e~G~~~~hkelE~l~A~f~g~e-~a~vF-~mGf~TNs~~~p---~l~~~gsLIi 225 (519)
T KOG1357|consen 155 PCAEASLKSFDK----YGLSRCSSRHEAGTTEEHKELEELVARFLGVE-DAIVF-SMGFATNSMNIP---SLLGKGSLII 225 (519)
T ss_pred cCChHHHHHHHH----hcccccccchhcccHHHHHHHHHHHHHhcCCc-ceEEE-eccccccccCcc---eeecCCccee
Confidence 356666665544 32221 1 245677889999999998763 33333 333333332222 1224455555
Q ss_pred EccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhc----c-----CCCCeeEEEe
Q 011777 187 LRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDF----G-----TSGKVAGFIA 257 (477)
Q Consensus 187 ~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~----~-----~~~~~a~vi~ 257 (477)
-+.--|+.......+++..... |..++ +.+||++++. . .+-+.-.||+
T Consensus 226 SDelNHaSi~~GaRLSgAtiRV--------------------fkHNd---m~~LEr~Lrd~I~~gqP~Thrp~kki~iiv 282 (519)
T KOG1357|consen 226 SDELNHASLITGARLSGATTRV--------------------FRHND---MQGLERLLRDAIVYGQPKTHRPWKKILICV 282 (519)
T ss_pred eccccchheeccccccCceEEE--------------------EecCC---HHHHHHHHHHHHhcCCCCcCCcchheeeee
Confidence 5666676655444443322111 11111 4566666642 1 1334568899
Q ss_pred cccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccC--ccCCCCCCccccccCCCc---cee--eecccccC-ccce
Q 011777 258 ETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTG--FGRTGSHYWGFETQGVIP---DIV--TMAKGIGN-GLPL 329 (477)
Q Consensus 258 epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g--fgr~G~~~~~~~~~gv~p---Div--t~sK~lg~-G~pi 329 (477)
|-+.++.|.++. |+++.+++|||..+|+.||+++. .|++| ....+.+++.| ||+ +|.|++|+ |
T Consensus 283 egiysmEg~iv~----Lp~vvalkkkykayl~lDEAHSiGA~g~tG--rgvce~~g~d~~dvDImMGtftKSfga~G--- 353 (519)
T KOG1357|consen 283 EGIYSMEGTIVD----LPEVVALKKKYKAYLYLDEAHSIGAMGATG--RGVCEYFGVDPEDVDIMMGTFTKSFGAAG--- 353 (519)
T ss_pred ccceeccCeecc----cHHHHHhhccccEEEEeeccccccccCCCC--cceeeccCCCchhheeecceehhhccccc---
Confidence 999999999998 89999999999999999999883 24565 23446677654 444 78999995 7
Q ss_pred EEEEeCHHHHHhhcccccccCCC--CcHHHHHHHHHHHHhhch-------hhHHHHHHHHHHHHHHHHHHHHHhCCCcee
Q 011777 330 GAVVTTPEIANVMAQKIQFNTFG--GNPVCSAGGLAVLRVIDK-------ERRQAHCADVGSHLLGRLRTLQERHDIIGD 400 (477)
Q Consensus 330 g~v~~~~~~~~~~~~~~~~~t~~--~~~~~~aaa~a~l~~l~~-------~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~ 400 (477)
|++.+++++++.++......++. -+|+.+.-.+..++++.. +.-.++++++..+++..|+.. +++..
T Consensus 354 Gyiagsk~lid~lrt~s~~~~yat~~sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~----gfivy 429 (519)
T KOG1357|consen 354 GYIAGSKELIDYLRTPSPSALYATSLSPPVAQQILTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQKM----GFIVY 429 (519)
T ss_pred ceecCcHHHHhhhccCCCceeecccCChHHHHHHHHHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhcC----cEEEe
Confidence 89999999999988665444443 234444555666776643 234566777777777766553 22211
Q ss_pred eeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCC-----CCCEEEEeCCCCCcHHHHHHHHHHHHHH
Q 011777 401 VRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGL-----HGNVFRIKPPMCFTKDDADFLVDALDYS 473 (477)
Q Consensus 401 v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~-----~~~~iRi~p~~~~t~e~i~~~l~~l~~~ 473 (477)
-......+.+-+. .......+.+.|+++++.+.-++. -....||+.+..++.|+++++++.++++
T Consensus 430 G~~dSpVvplll~--------~~~k~~~f~r~~l~~nigvVvvgfPatpl~e~r~R~c~Sa~ht~e~ld~~l~~i~~~ 499 (519)
T KOG1357|consen 430 GNNDSPVVPLLLY--------GPAKIVAFSREMLERNIGVVVVGFPATPLLESRARFCLSASHTKEDLDRALEVIDRV 499 (519)
T ss_pred cCCCCCcceeeec--------CcccccHHHHHHHhcCceEEEEeCCCchHHHhHHHhhhcccccHHHHHHHHHHHhhh
Confidence 1111111111111 011234677889988776544321 1346799999999999999999998865
No 295
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.64 E-value=1.4e-13 Score=139.93 Aligned_cols=330 Identities=15% Similarity=0.069 Sum_probs=193.9
Q ss_pred CCHHHHHHHHHHHhhc-ccccc-ccCChHHHHHHHHHHhhCCCC-C-CEEEE--eCChHHHHHHHHHHHHhcc-------
Q 011777 113 CHPDVLNAIFEQSKLL-QHATT-IYLHHAIADFAEALASKMPGN-L-KVVYF--VNSGTEANELAMLMARLST------- 179 (477)
Q Consensus 113 ~~p~v~~Av~~~l~~~-~~~~~-~~~~~~~~~l~~~La~~~~~~-~-~~v~~--~~sGseA~~~Al~~ar~~~------- 179 (477)
.+|++.+++.+.+... .+... ....+..++..++++++++.+ . +.+.| |+||||||..|++.+|...
T Consensus 53 ~~p~~~~~~~~~l~~~~~np~s~~~~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~ 132 (431)
T TIGR01788 53 MEPEARKLMDETINKNMIDKDEYPQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAA 132 (431)
T ss_pred CCHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHhc
Confidence 5889999998888642 11111 112356778889999998765 2 34555 8999999999998876321
Q ss_pred C---CceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEE
Q 011777 180 G---NLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFI 256 (477)
Q Consensus 180 ~---~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi 256 (477)
+ ....|+....-|-....+....+. .+..++... .....+ .++|+++|+ +++.+|+
T Consensus 133 g~~~~~~~ii~s~~~H~sv~ka~~~lg~----------~v~~i~~d~-~~~~vd------~~~L~~~i~----~~t~lV~ 191 (431)
T TIGR01788 133 GKPTDKPNLVMGSNVQVCWEKFARYFDV----------ELREVPMDP-GRYVID------PEQVVEAVD----ENTIGVV 191 (431)
T ss_pred CCCCCCcEEEEcCcchHHHHHHHHHcCc----------eeEEEecCC-CceeeC------HHHHHHHHh----hCCeEEE
Confidence 1 122444444445433222111110 122232211 001111 578888886 3567888
Q ss_pred ecccCCCCCeeeCCchhHHHHHHHHHHh------CcEEEEcCcccCccC---CCCCCccccccCCCcceeeec--ccccC
Q 011777 257 AETIQGVGGAVELAPGYLKLVYDIVRKA------GGVCIADEVQTGFGR---TGSHYWGFETQGVIPDIVTMA--KGIGN 325 (477)
Q Consensus 257 ~epi~~~~G~~~~~~~~l~~l~~l~~~~------gillI~DEv~~gfgr---~G~~~~~~~~~gv~pDivt~s--K~lg~ 325 (477)
+.-.+++.|.+.| +++|.++|+++ |+++++|.+|.|+-. .+...+.+. ....|.++++ |.+.+
T Consensus 192 ~t~g~t~tG~idp----i~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~--~~~~DSis~s~HK~~~~ 265 (431)
T TIGR01788 192 CILGTTYTGEYED----VKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFR--LPRVKSINVSGHKYGLV 265 (431)
T ss_pred EEeCCCCCcccCC----HHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcC--CCCceEEEECchhccCC
Confidence 8889999999999 99999999999 999999999997531 221112222 2245778876 87655
Q ss_pred ccceEEEEeCHH--HHHhhccc--cc-----ccCCCCc-H-HHHHHHHHHHHhhch---hhHHHHHHHHHHHHHHHHHHH
Q 011777 326 GLPLGAVVTTPE--IANVMAQK--IQ-----FNTFGGN-P-VCSAGGLAVLRVIDK---ERRQAHCADVGSHLLGRLRTL 391 (477)
Q Consensus 326 G~pig~v~~~~~--~~~~~~~~--~~-----~~t~~~~-~-~~~aaa~a~l~~l~~---~~~~~~~~~~~~~l~~~L~~l 391 (477)
...+|+++.+++ +.+.+... .. ..++.+. + ...++....|..+.. ++..++..++.+++.++|+++
T Consensus 266 P~g~G~l~~r~~~~l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~ 345 (431)
T TIGR01788 266 YPGVGWVIWRDEEALPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKL 345 (431)
T ss_pred CCCcEEEEEeChHHcchhheecccccCCCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 677899988764 32332210 00 0122221 1 122334445554443 345566666777777777654
Q ss_pred HHhCCCceee-e-ccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceee----ccCC-CCCEEEEeCCCCCcHHHHH
Q 011777 392 QERHDIIGDV-R-GRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVG----KGGL-HGNVFRIKPPMCFTKDDAD 464 (477)
Q Consensus 392 ~~~~~~~~~v-~-g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~----~~~~-~~~~iRi~p~~~~t~e~i~ 464 (477)
+.+.-+ + ....++.|.+..+. .......++.+.|.++|+.+. |... ..-++|++..-.++++.++
T Consensus 346 ----~~~el~~~~~~~~iV~Fr~~~~~----~~~~~~~~l~~~L~~~G~~~~~~~~p~~~~~~~~lR~~~~~~~~~~~~~ 417 (431)
T TIGR01788 346 ----GPFEIISDGSGIPLVAFKLKDDA----DPGYTLYDLSHRLRERGWIVPAYTLPKNAEDIVVMRIVVREGFSRDLAE 417 (431)
T ss_pred ----CCEEEeeCCCCceEEEEEeCCCC----CCCcCHHHHHHHHHHCCCcccCCCCCCccCCeEEEEEEecCCCCHHHHH
Confidence 322111 1 23344555553211 011124578889999998642 2211 1246898776678899999
Q ss_pred HHHHHHHHHHhhC
Q 011777 465 FLVDALDYSMSKL 477 (477)
Q Consensus 465 ~~l~~l~~~l~~l 477 (477)
.+++.|+.++..+
T Consensus 418 ~~~~~~~~~~~~~ 430 (431)
T TIGR01788 418 LLIEDIEAALAYL 430 (431)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999988653
No 296
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.64 E-value=5.4e-14 Score=140.51 Aligned_cols=310 Identities=10% Similarity=0.031 Sum_probs=187.2
Q ss_pred CCHHHHHHHHHHHhhc----------cccccccCChHHHHHHHHHHhhCCC--CCCEEEEeCChHHHHHHHHHHHHhccC
Q 011777 113 CHPDVLNAIFEQSKLL----------QHATTIYLHHAIADFAEALASKMPG--NLKVVYFVNSGTEANELAMLMARLSTG 180 (477)
Q Consensus 113 ~~p~v~~Av~~~l~~~----------~~~~~~~~~~~~~~l~~~La~~~~~--~~~~v~~~~sGseA~~~Al~~ar~~~~ 180 (477)
.+++|++|+...+.+. .|.... ..+...+..++|+++++. +.+.+++++||+.|+|+++.-... +
T Consensus 14 ~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~-f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~nl~~--~ 90 (360)
T PRK05355 14 LPEEVLEQAQQELLDWNGSGMSVMEISHRSKE-FEAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPMNLLG--G 90 (360)
T ss_pred CCHHHHHHHHHHhhccccCCccccccCCCCHH-HHHHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHHHhcCC--C
Confidence 4899999999887432 121111 125577888999998874 234566668999999999875433 4
Q ss_pred CceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHH-HHhccCCCCeeEEEecc
Q 011777 181 NLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQD-HIDFGTSGKVAGFIAET 259 (477)
Q Consensus 181 ~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~-~i~~~~~~~~a~vi~ep 259 (477)
++++++...+..|....-+...... ...+..+...... . ..++++ .++ .++.+|.+..
T Consensus 91 g~~~l~i~~G~fg~r~~~~a~~~g~----------~~~~~~~~~~g~~-~------~~~~~~~~l~----~~~~~V~~th 149 (360)
T PRK05355 91 GKKADYVDTGSWSKKAIKEAKKYGE----------VNVAASSEDDGFT-Y------IPPLDEWQLS----DDAAYVHYTS 149 (360)
T ss_pred CCeEEEEECCHHHHHHHHHHHHhCC----------ceEEecccccCCC-C------CCChhhccCC----CCCCEEEEcc
Confidence 4667777777777655322221100 0111111001000 0 122333 343 2466777777
Q ss_pred cCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCcceeeec--ccccCccceEEEEeCHH
Q 011777 260 IQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMA--KGIGNGLPLGAVVTTPE 337 (477)
Q Consensus 260 i~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~s--K~lg~G~pig~v~~~~~ 337 (477)
+-..+|+..++ +++| ||+++|+|-+|+ +|. ....++.+ |++++| |++| ...+|+++++++
T Consensus 150 ~eTstGv~~~~---i~~i------~g~l~vVDavss-~g~---~~idv~~~----d~~~~ssqK~lg-P~Glg~l~~s~~ 211 (360)
T PRK05355 150 NETIDGTEFHE---LPDT------GDVPLVADMSSD-ILS---RPIDVSKF----GLIYAGAQKNIG-PAGLTIVIVRED 211 (360)
T ss_pred CCCcceEecCc---cccc------CCCcEEEEcCcc-ccC---ccCCHHHc----cEEEEecccccc-CCceEEEEECHH
Confidence 77777876532 4444 899999999998 432 23333332 466665 9885 445899999999
Q ss_pred HHHhhccc-----------ccccC-CCCcHHHHHHHHHHHHhhchh----hHHHHHHHHHHHHHHHHHHHHHhCCCcee-
Q 011777 338 IANVMAQK-----------IQFNT-FGGNPVCSAGGLAVLRVIDKE----RRQAHCADVGSHLLGRLRTLQERHDIIGD- 400 (477)
Q Consensus 338 ~~~~~~~~-----------~~~~t-~~~~~~~~aaa~a~l~~l~~~----~~~~~~~~~~~~l~~~L~~l~~~~~~~~~- 400 (477)
+.+.+.+. ....+ ++.|.....+..++|+.+.++ +..++.+++.++++++|+++ +....
T Consensus 212 ~l~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~----~~~~~~ 287 (360)
T PRK05355 212 LLGRALPSIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSS----DFYRNP 287 (360)
T ss_pred HHhhcccCCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhC----CCcccC
Confidence 88776541 11112 334556666666888887655 34555556666666666654 32211
Q ss_pred --eeccc-eeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 401 --VRGRG-LMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 401 --v~g~g-~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
...+. ..+.+.+ +......++...+.++|+.+..+....+.+|+++...+|++||+.+++.|++++..
T Consensus 288 ~~~~~rs~~v~sf~~--------~~~~~~~~~~~~~~~~Gi~~~~~~~~~g~vRiS~~~~nt~eei~~l~~~l~~~~~~ 358 (360)
T PRK05355 288 VAPEDRSRMNVPFTL--------ADEELDKKFLAEAKAAGLVGLKGHRSVGGMRASIYNAMPLEGVQALVDFMKEFERR 358 (360)
T ss_pred CChhhcCCcEEEEEc--------CChHHHHHHHHHHHHCCCcccCCCCccCcEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 01112 3344443 22223356777888999998555322478999999999999999999999998753
No 297
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.64 E-value=1.2e-13 Score=138.72 Aligned_cols=236 Identities=13% Similarity=0.036 Sum_probs=147.2
Q ss_pred cccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCC
Q 011777 133 TIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIP 212 (477)
Q Consensus 133 ~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~ 212 (477)
.+..++...+|+++|+++.+. +.+++++||++|+..++.... .++++||+.++.|.+......... .
T Consensus 56 ~r~~npt~~~Le~~iA~le~~--~~~~~~~sG~~Ai~~~l~all--~~GD~Vvv~~~~Y~~t~~l~~~~l---------~ 122 (394)
T PRK09028 56 GRRGTPTHFAFQAAIVELEGG--AGTALYPSGAAAISNALLSFL--KAGDHLLMVDSCYEPTRDLCDKIL---------K 122 (394)
T ss_pred cCCCCchHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHHh--CCCCEEEEECCCcHHHHHHHHHhh---------h
Confidence 344567788999999998754 468899999999999887543 367889999999866543211100 0
Q ss_pred CCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcC
Q 011777 213 QGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADE 292 (477)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DE 292 (477)
..|+....++. . + .++++++++ +++++|++|.+.|+.|.+.+ +++|.++|++||+++|+|+
T Consensus 123 ~~Gi~v~~v~~------~-~----~e~l~~~l~----~~TklV~lespsNPtg~v~d----l~~I~~la~~~g~~lvvD~ 183 (394)
T PRK09028 123 GFGIETTYYDP------M-I----GEGIRELIR----PNTKVLFLESPGSITMEVQD----VPTLSRIAHEHDIVVMLDN 183 (394)
T ss_pred hcceEEEEECC------C-C----HHHHHHhcC----cCceEEEEECCCCCCCcHHH----HHHHHHHHHHcCCEEEEEC
Confidence 01222211110 0 1 256777765 46889999998888876655 9999999999999999999
Q ss_pred cccCccCCCCCCccccccCCCccee--eecccccC-c-cceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhh
Q 011777 293 VQTGFGRTGSHYWGFETQGVIPDIV--TMAKGIGN-G-LPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVI 368 (477)
Q Consensus 293 v~~gfgr~G~~~~~~~~~gv~pDiv--t~sK~lg~-G-~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l 368 (477)
+|+. + ..+.-.....|++ +.+|.++| | .-.|+++.++++.+.+...........+|..+...+..|+.+
T Consensus 184 t~a~----p---~~~~Pl~~GaDivv~S~tK~l~Gh~d~~~G~~~~~~~~~~~l~~~~~~~G~~~~p~~a~l~~rgl~TL 256 (394)
T PRK09028 184 TWAS----P---INSRPFEMGVDISIQAATKYIVGHSDVMLGTATANEKHWDQLREHSYLMGQCTSPDDVYLAMRGLRTL 256 (394)
T ss_pred Cccc----c---ccCCccccCceEEEEeCCeEecCCCCEEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHcccCcH
Confidence 9972 2 1122223345766 46799987 3 777888778877665543221112234566666555555433
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHhCCCcee------------------eeccceeEEEEEe
Q 011777 369 DKERRQAHCADVGSHLLGRLRTLQERHDIIGD------------------VRGRGLMVGMELV 413 (477)
Q Consensus 369 ~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~------------------v~g~g~~~~i~~~ 413 (477)
. -..++..++...+.+.|++ +|.+.. ..|.|.|+.+++.
T Consensus 257 ~--lR~~~~~~na~~la~~L~~----~p~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~ 313 (394)
T PRK09028 257 G--VRLAQHEKNALKVANWLAT----RPEVDHVRHPAFETCPGHEFFKRDFSGSNGLFSFVLK 313 (394)
T ss_pred H--HHHHHHHHHHHHHHHHHhc----CCCccEEECCCCCCCccHHHHHHhccCCCceEEEEEC
Confidence 2 2234444455555555443 332211 2356788888884
No 298
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.64 E-value=1.1e-13 Score=137.54 Aligned_cols=312 Identities=12% Similarity=0.034 Sum_probs=183.6
Q ss_pred CCHHHHHHHHHHHhhccc--ccc----ccCC---hHHHHHHHHHHhhCCC-CCCEEEEe-CChHHHHHHHHHHHHhccCC
Q 011777 113 CHPDVLNAIFEQSKLLQH--ATT----IYLH---HAIADFAEALASKMPG-NLKVVYFV-NSGTEANELAMLMARLSTGN 181 (477)
Q Consensus 113 ~~p~v~~Av~~~l~~~~~--~~~----~~~~---~~~~~l~~~La~~~~~-~~~~v~~~-~sGseA~~~Al~~ar~~~~~ 181 (477)
.+..|++++.+.+..... ... .... ....++.++|++++.. ...+|+|+ +|||+|+|+++..... +.
T Consensus 3 ~p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~~--~~ 80 (349)
T TIGR01364 3 LPEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLLA--EG 80 (349)
T ss_pred CCHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCC--CC
Confidence 356899999888774321 000 0111 4466778888888864 22345555 6699999999885432 45
Q ss_pred ceEEEEccCccCCcccccccccCCCCCCCCCCCCe-eeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEeccc
Q 011777 182 LGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEI-HHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETI 260 (477)
Q Consensus 182 ~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi 260 (477)
++++++..++.|....-++... |. ..+..+ ...++++ ..++++... ..++.+|.+..+
T Consensus 81 ~~~l~i~~G~fg~r~~~~a~~~-----------g~~~~~~~~--~~~~~~~-----~~~~~~~~~---~~~~~~v~~th~ 139 (349)
T TIGR01364 81 KVADYIVTGAWSKKAAKEAKKY-----------GVVNVVASG--KEGNYTK-----IPDPSTWEI---SEDAAYVHYCAN 139 (349)
T ss_pred CeEEEEECCHHHHHHHHHHHHh-----------CCcEEEecc--ccCCCCC-----CCCHHhcCC---CCCCCEEEEcCC
Confidence 6777777888776553332211 11 111111 0111111 112332221 135666777666
Q ss_pred CCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCcceeeec--ccccCccceEEEEeCHHH
Q 011777 261 QGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMA--KGIGNGLPLGAVVTTPEI 338 (477)
Q Consensus 261 ~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~s--K~lg~G~pig~v~~~~~~ 338 (477)
-..+|+..+ ++++.+|+++++|-|++ +|. ....++.+ |++++| |++| ...+|+++.++++
T Consensus 140 ETstGv~~~---------~l~~~~~~l~iVDavss-~g~---~~id~~~~----d~~~~ssqK~lg-P~Glg~l~~s~~~ 201 (349)
T TIGR01364 140 ETIHGVEFR---------ELPDVKNAPLVADMSSN-ILS---RPIDVSKF----GLIYAGAQKNIG-PAGLTVVIVRKDL 201 (349)
T ss_pred CCcccEecc---------eecccCCCeEEEEcccc-ccC---ccCCHHHc----cEEEEecccccC-CCceEEEEECHHH
Confidence 667776543 67777899999999998 432 23333332 366555 9985 4458999999998
Q ss_pred HHhhcccc-----------cccCC-CCcHHHHHHHHHHHHhhchh-h---HHHHHHHHHHHHHHHHHHHHHhCCCcee-e
Q 011777 339 ANVMAQKI-----------QFNTF-GGNPVCSAGGLAVLRVIDKE-R---RQAHCADVGSHLLGRLRTLQERHDIIGD-V 401 (477)
Q Consensus 339 ~~~~~~~~-----------~~~t~-~~~~~~~aaa~a~l~~l~~~-~---~~~~~~~~~~~l~~~L~~l~~~~~~~~~-v 401 (477)
.+.+.... ...++ +.|.....+..++|+.+.++ + ..++.+++.++++++|+++. ++... .
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~---gl~~~~~ 278 (349)
T TIGR01364 202 LGRASRITPSMLNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSN---GFYRNPV 278 (349)
T ss_pred HhhcccCCCCcchHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCC---CeeccCC
Confidence 87654320 11223 44555666666888887654 3 44555556666666665541 12111 1
Q ss_pred --eccc-eeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 402 --RGRG-LMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 402 --~g~g-~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
..+. ..+.+.+.. .....++...+.++|+.+.++....+.+|+++...+|+||||.++++|++++++
T Consensus 279 ~~~~rs~~v~sf~~~~--------~~~~~~~~~~~~~~Gi~~~~~~~~~g~vRvS~~~~nt~edid~l~~al~~~~~~ 348 (349)
T TIGR01364 279 DPRNRSRMNVVFTLGN--------EELEKRFLKEAEERGLVSLKGHRSVGGMRASIYNAMPLEGVQALVDFMKEFQKK 348 (349)
T ss_pred CHHHcCCeEEEEecCC--------hhHhHHHHHHHHHCCCcccCCccccCeeEEECcCCCCHHHHHHHHHHHHHHHHh
Confidence 1122 334444321 112356667888999966554322468999999999999999999999998764
No 299
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.63 E-value=1.2e-13 Score=140.58 Aligned_cols=167 Identities=19% Similarity=0.203 Sum_probs=115.2
Q ss_pred ccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCC
Q 011777 130 HATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKY 209 (477)
Q Consensus 130 ~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~ 209 (477)
+..+++.++...+|+++|+++.+. +..++++||++|+.++++.... ++++||+..+.|++........
T Consensus 50 ~~y~r~~~pt~~~Le~~lA~l~g~--~~~l~~ssG~~Ai~~al~al~~--~Gd~Vl~~~~~Y~~t~~~~~~~-------- 117 (425)
T PRK06084 50 NIYTRIMNPTNDVLEQRVAALEGG--VGALAVASGMAAITYAIQTIAE--AGDNIVSVAKLYGGTYNLLAHT-------- 117 (425)
T ss_pred ccccCCCCchHHHHHHHHHHHhCC--CceeEehhHHHHHHHHHHHHhC--CCCEEEEeCCCcchHHHHHHHh--------
Confidence 334456678888999999999864 4677899999999999986543 4678999999998643322111
Q ss_pred CCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEE
Q 011777 210 PIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCI 289 (477)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI 289 (477)
.+..++.....+. . | .++++++++ +++++|++|+++++.|.+.+ +++|.++|++||+++|
T Consensus 118 -l~~~gi~v~~~d~------~-d----~e~le~ai~----~~tklV~lesp~NPtG~v~d----l~~I~~la~~~~i~vV 177 (425)
T PRK06084 118 -LPRIGIETRFAAH------D-D----IAALEALID----ERTKAVFCESIGNPAGNIID----IQALADAAHRHGVPLI 177 (425)
T ss_pred -cccceeEEEEECC------C-C----HHHHHHHhc----cCCcEEEEeCCCCCCCeecC----HHHHHHHHHHcCCEEE
Confidence 0011222211110 0 1 477888876 36789999998889997776 8999999999999999
Q ss_pred EcCcccCccCCCCCCccccccCCCccee--eecccccC-ccceEEEEeC
Q 011777 290 ADEVQTGFGRTGSHYWGFETQGVIPDIV--TMAKGIGN-GLPLGAVVTT 335 (477)
Q Consensus 290 ~DEv~~gfgr~G~~~~~~~~~gv~pDiv--t~sK~lg~-G~pig~v~~~ 335 (477)
+||+|+ .+... .......|++ +++|.++| |.++|.+++.
T Consensus 178 vD~a~a-~~~~~------~p~~~gaDivv~S~tK~l~G~g~~~gG~v~~ 219 (425)
T PRK06084 178 VDNTVA-TPVLC------RPFEHGADIVVHSLTKYIGGHGTSIGGIVVD 219 (425)
T ss_pred EECCCc-ccccC------ChhhcCCCEEEECchhcccccccceeEEEEe
Confidence 999997 22211 1122345666 57899997 6788766653
No 300
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.63 E-value=2e-13 Score=149.33 Aligned_cols=302 Identities=15% Similarity=0.159 Sum_probs=195.3
Q ss_pred hHHHHHHHHHHhhCCCCCCEEEEeCChH----HHHHHHHHHHHhccC--CceEEEEccCccCCcccccccccCCCCCCCC
Q 011777 138 HAIADFAEALASKMPGNLKVVYFVNSGT----EANELAMLMARLSTG--NLGMIALRNAYHGGSSGTIGLTALNTWKYPI 211 (477)
Q Consensus 138 ~~~~~l~~~La~~~~~~~~~v~~~~sGs----eA~~~Al~~ar~~~~--~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~ 211 (477)
+...++.++|+++++. +.|.|+++++ +|+..+++......| +..+|+....-||.........
T Consensus 568 ~~~~~~r~~la~i~g~--~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~~~--------- 636 (993)
T PLN02414 568 EMFEDLGDLLCEITGF--DSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAAMC--------- 636 (993)
T ss_pred HHHHHHHHHHHHHhCC--CeEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHHHHC---------
Confidence 4457899999999954 8899999888 888888886654322 1236666678888766444432
Q ss_pred CCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEc
Q 011777 212 PQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIAD 291 (477)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~D 291 (477)
|+..+.+|....+..+ +++|+++++. +.+++++|++...++.+|...+ +++|.++|+++|+++++|
T Consensus 637 ---G~~vv~v~~d~~G~vD------le~L~~~i~~-~~~~ta~V~vt~pSn~gg~e~~----I~eI~~iah~~Galv~vD 702 (993)
T PLN02414 637 ---GMKIVVVGTDAKGNIN------IEELRKAAEA-HKDNLAALMVTYPSTHGVYEEG----IDEICDIIHDNGGQVYMD 702 (993)
T ss_pred ---CCEEEEeccCCCCCcC------HHHHHHHHhc-cCCCeEEEEEECCCccccccch----HHHHHHHHHHcCCEEEEE
Confidence 3333333322222222 6888888872 1247899999888888887777 999999999999999999
Q ss_pred CcccCccCCCCCCccccccCCCcceeee--ccccc-----CccceEEEEeCHHHHHhhcccc-----------c---ccC
Q 011777 292 EVQTGFGRTGSHYWGFETQGVIPDIVTM--AKGIG-----NGLPLGAVVTTPEIANVMAQKI-----------Q---FNT 350 (477)
Q Consensus 292 Ev~~gfgr~G~~~~~~~~~gv~pDivt~--sK~lg-----~G~pig~v~~~~~~~~~~~~~~-----------~---~~t 350 (477)
-+|. .+..+ + ..-.....|++++ .|+|+ ||..+|++.++++++..+.... . .+|
T Consensus 703 gAq~-~a~~~--l--~~p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~L~p~lPg~~v~~~~~~~~r~~~s~iGt 777 (993)
T PLN02414 703 GANM-NAQVG--L--TSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTGGIPRPEKTQPLGT 777 (993)
T ss_pred ecCH-HhccC--c--CCccccCCCEEEecCCccCCcCcccCCCCeeeEEEchhhcccCCCCccccCCCcccccCCCCcCC
Confidence 9985 22111 0 1112345688876 49776 3467999999998876654310 0 123
Q ss_pred CC----CcHHHHHHHHHHHHhhchhhH---HHHHHHHHHHHHHHHHHHHHhCCCceeeeccce---eEEEEEeeCCCCCC
Q 011777 351 FG----GNPVCSAGGLAVLRVIDKERR---QAHCADVGSHLLGRLRTLQERHDIIGDVRGRGL---MVGMELVTDRKEKT 420 (477)
Q Consensus 351 ~~----~~~~~~aaa~a~l~~l~~~~~---~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~---~~~i~~~~~~~~~~ 420 (477)
.. ++.+...++...++.+..+.+ .++...+..|++++|.+. ++.... ...|. -+.+.+.. .+.
T Consensus 778 ~~~a~~g~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~---~~~~~~-~~~~~~~hEfv~~~~~---l~~ 850 (993)
T PLN02414 778 ISAAPWGSALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGH---YPVLFR-GKNGTCAHEFIIDLRP---FKN 850 (993)
T ss_pred ccchhhhhHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhh---CCcccc-CCCCCeeeeEEEeccc---ccc
Confidence 22 344555566666776666666 667777888998888762 332221 11222 11222221 000
Q ss_pred ccHHHHHHHHHHHHHcCceeeccC-CCCCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 421 PAKAETAVLFEKLRELGVLVGKGG-LHGNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 421 ~~~~~~~~~~~~l~~~Gv~v~~~~-~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
........+.+.|.+.|+...... ...+.+|++|.-..+++|||+++++|..+..+
T Consensus 851 ~~g~~~~di~krL~d~Gihapt~~~pv~~~lmiepTE~~skeelDrf~~al~~i~~e 907 (993)
T PLN02414 851 TAGIEPEDVAKRLMDYGFHAPTMSWPVPGTLMIEPTESESKAELDRFCDALISIREE 907 (993)
T ss_pred ccCCCHHHHHHHHHHcCcEEeeeccccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHH
Confidence 001224678899999999865421 12578999999999999999999999877543
No 301
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.63 E-value=2.2e-13 Score=137.37 Aligned_cols=308 Identities=14% Similarity=0.080 Sum_probs=177.5
Q ss_pred HHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCC
Q 011777 115 PDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGG 194 (477)
Q Consensus 115 p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~ 194 (477)
++-.+++.+.+.....+ ...+...++++++++.++. +++++++||++|+.++++.+. ..+++.||+...+|.+.
T Consensus 11 ~~~~~~~~~~l~~~~~~---g~~~~~~~~e~~la~~~g~--~~~v~~~sgt~al~~~l~~~~-~~~Gd~Viv~~~t~~~~ 84 (375)
T PRK11706 11 GTELDYIQQAMSSGKLC---GDGGFTRRCQQWLEQRFGS--AKVLLTPSCTAALEMAALLLD-IQPGDEVIMPSYTFVST 84 (375)
T ss_pred HHHHHHHHHHHHcCCcc---CCCHHHHHHHHHHHHHhCC--CeEEEECCHHHHHHHHHHHhC-CCCCCEEEECCCCcHHH
Confidence 34466677766553221 1246678899999998744 789999999999998887542 34567899988888866
Q ss_pred cccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhH
Q 011777 195 SSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYL 274 (477)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l 274 (477)
....... |...+..+.... .+..| .+++++.++ .++++|++.. ..|.... +
T Consensus 85 ~~~~~~~-------------G~~~v~~d~d~~-~~~~d----~~~le~~i~----~~tk~i~~~~---~~G~~~~----~ 135 (375)
T PRK11706 85 ANAFVLR-------------GAKIVFVDIRPD-TMNID----ETLIEAAIT----PKTRAIVPVH---YAGVACE----M 135 (375)
T ss_pred HHHHHHc-------------CCEEEEEecCCC-cCCcC----HHHHHHhcC----CCCeEEEEeC---CCCCccC----H
Confidence 4443332 222222111100 11112 477888775 2466666432 3454444 8
Q ss_pred HHHHHHHHHhCcEEEEcCcccCcc-CCCCCCccccccCCCcceeeec----ccccCccceEEEEeCHHHHHhhccccc--
Q 011777 275 KLVYDIVRKAGGVCIADEVQTGFG-RTGSHYWGFETQGVIPDIVTMA----KGIGNGLPLGAVVTTPEIANVMAQKIQ-- 347 (477)
Q Consensus 275 ~~l~~l~~~~gillI~DEv~~gfg-r~G~~~~~~~~~gv~pDivt~s----K~lg~G~pig~v~~~~~~~~~~~~~~~-- 347 (477)
++|.++|++||+++|.|++|+-+. ..| .. .|..-|+.+|| |.++.|.+.++++.++++.+.+.....
T Consensus 136 ~~i~~la~~~~i~vIeD~a~a~g~~~~~-~~-----~g~~~~~~~~Sf~~~K~l~~g~gG~~~~~~~~~~~~~~~~~~~g 209 (375)
T PRK11706 136 DTIMALAKKHNLFVVEDAAQGVMSTYKG-RA-----LGTIGHIGCFSFHETKNYTAGEGGALLINDPALIERAEIIREKG 209 (375)
T ss_pred HHHHHHHHHcCCEEEEECccccccccCC-ee-----eecCcCEEEEeCCCCccccccCCeEEEECCHHHHHHHHHHHHcC
Confidence 999999999999999999997332 122 11 12224777888 999866665666667887765443211
Q ss_pred -------------------ccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCce--eee----
Q 011777 348 -------------------FNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIG--DVR---- 402 (477)
Q Consensus 348 -------------------~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~--~v~---- 402 (477)
+.++-.+.+.++.+++.++.+ ++..++-+++.+++.+.|..+.. .+.+. ...
T Consensus 210 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~ql~~l--~~~~~~R~~~~~~~~~~L~~~~~-~~~~~~~~~~~~~~ 286 (375)
T PRK11706 210 TNRSQFFRGQVDKYTWVDIGSSYLPSELQAAYLWAQLEAA--DRINQRRLALWQRYYDALAPLAE-AGRIELPSIPDDCK 286 (375)
T ss_pred CCcchhhccCCCcceeeecccccCcCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhcCCCc-CCeeecCCCCCCCc
Confidence 111222345555555555543 33445555555555555544310 01111 011
Q ss_pred ccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccC-----------------C-------CCCEEEEeCCCCC
Q 011777 403 GRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGG-----------------L-------HGNVFRIKPPMCF 458 (477)
Q Consensus 403 g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~-----------------~-------~~~~iRi~p~~~~ 458 (477)
....++++.+.. ....+++.+.|.++||.+.... . ..+.+.+=.....
T Consensus 287 ~~~~~~~~~~~~--------~~~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l 358 (375)
T PRK11706 287 HNAHMFYIKLRD--------LEDRSALINFLKEAGIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKESERLLRLPLFYNL 358 (375)
T ss_pred eeeEEEEEEECC--------cCCHHHHHHHHHHCCCCccccCCccCcchhhHhcCCCCCCChHHHHHHhCcEeccCCCCC
Confidence 112233444421 1135678999999999854210 0 1123333222336
Q ss_pred cHHHHHHHHHHHHHHH
Q 011777 459 TKDDADFLVDALDYSM 474 (477)
Q Consensus 459 t~e~i~~~l~~l~~~l 474 (477)
+++|++..++.|++++
T Consensus 359 ~~~~~~~i~~~i~~~~ 374 (375)
T PRK11706 359 TDVEQRTVIDTILEFF 374 (375)
T ss_pred CHHHHHHHHHHHHHHh
Confidence 8999999999998865
No 302
>PLN03032 serine decarboxylase; Provisional
Probab=99.63 E-value=3.2e-13 Score=134.41 Aligned_cols=286 Identities=17% Similarity=0.117 Sum_probs=177.4
Q ss_pred ChHHHHHHHHHHhhCCCCCCEE--EEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCC
Q 011777 137 HHAIADFAEALASKMPGNLKVV--YFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQG 214 (477)
Q Consensus 137 ~~~~~~l~~~La~~~~~~~~~v--~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~ 214 (477)
.....++.++++++++.+.+.+ +||+||||||..|+..+|...++ .+++....-|-...-+....+.
T Consensus 65 ~~~e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~-~~vi~s~~~H~Sv~kaa~~lg~---------- 133 (374)
T PLN03032 65 RQFEVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGILVGREVFPD-GILYASRESHYSVFKAARMYRM---------- 133 (374)
T ss_pred HHHHHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHHHHHHHhCCC-cEEEeCCCceeHHHHHHHHcCC----------
Confidence 3456788888999987665555 99999999999999999875443 3556666666554433322221
Q ss_pred CeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhC-----cEEE
Q 011777 215 EIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAG-----GVCI 289 (477)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~g-----illI 289 (477)
++..++.. ..+..+ +++|++.|+.. ..++.+|++.-.+++.|.+.| +++|.++|++|| ++++
T Consensus 134 ~~~~V~~d--~~g~id------~~~L~~~i~~~-~~~~~lvv~tagtt~tG~idp----i~eI~~i~~~~g~~~~~~~lH 200 (374)
T PLN03032 134 EAVKVPTL--PSGEID------YDDLERALAKN-RDKPAILNVNIGTTVKGAVDD----LDRILRILKELGYTEDRFYIH 200 (374)
T ss_pred CCeEeeeC--CCCcCc------HHHHHHHHHHc-CCCCEEEEEEecCcCCccCCC----HHHHHHHHHHhCCCCCCeeEE
Confidence 12222221 111222 58888888732 225667777777788898888 999999999997 5899
Q ss_pred EcCcccCccC--CC-CCCccccccCCCcceeeec--ccccCccceEEEEeCHHHHHhhcccc-----cccCCCC--cHHH
Q 011777 290 ADEVQTGFGR--TG-SHYWGFETQGVIPDIVTMA--KGIGNGLPLGAVVTTPEIANVMAQKI-----QFNTFGG--NPVC 357 (477)
Q Consensus 290 ~DEv~~gfgr--~G-~~~~~~~~~gv~pDivt~s--K~lg~G~pig~v~~~~~~~~~~~~~~-----~~~t~~~--~~~~ 357 (477)
+|.+|.|+-. .. ...+.+ ....|.++++ |-++...++|+++.+++..+.+.... ...|+.+ +...
T Consensus 201 vDaA~gg~~~p~~~~~~~~~~---~~~vDSis~s~HK~~g~P~g~G~ll~r~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~ 277 (374)
T PLN03032 201 CDGALFGLMMPFVSRAPEVTF---RKPIGSVSVSGHKFLGCPMPCGVALTRKKHVKALSQNVEYLNSRDATIMGSRNGHA 277 (374)
T ss_pred EEccchhhhhhccCCCcccCC---CcCCcEEEECcccccCCCcCeEEEEEEchhhHhhccCCcccCCCCCcccCCCchHH
Confidence 9999986411 00 001111 1246878776 86665788999999988776553211 1123333 3455
Q ss_pred HHHHHHHHHhhchhh---HHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHH
Q 011777 358 SAGGLAVLRVIDKER---RQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLR 434 (477)
Q Consensus 358 ~aaa~a~l~~l~~~~---~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~ 434 (477)
.++..++|+.+..+. ..++..++.+++.++|++. +......+..+. +-|..+ .. . . .
T Consensus 278 ~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~----~~~~~~~p~~~~--V~f~~~------~~---~----~-~ 337 (374)
T PLN03032 278 PLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEA----GLTCRLNELSST--VVFERP------MD---E----A-F 337 (374)
T ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC----CCcEEECCCceE--EEEcCC------Cc---H----h-H
Confidence 666677777766554 4566666777888877663 222222223333 333221 10 1 1 2
Q ss_pred HcCceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHH
Q 011777 435 ELGVLVGKGGLHGNVFRIKPPMCFTKDDADFLVDALDY 472 (477)
Q Consensus 435 ~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~ 472 (477)
.+|..+.+. ++.+|+.....++++.+|++++-|.+
T Consensus 338 ~~~w~l~~~---~~~~hi~vm~~~~~~~id~fi~dl~~ 372 (374)
T PLN03032 338 IKKWQLACE---GDIAHVVVMPNVTVEKLDEFVEELVE 372 (374)
T ss_pred hheeeeccc---CCEEEEEECCCCCHHHHHHHHHHHhc
Confidence 246555532 35778877777889999999998865
No 303
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.62 E-value=2.2e-13 Score=140.29 Aligned_cols=324 Identities=13% Similarity=0.027 Sum_probs=179.6
Q ss_pred CCCHHHHHHHHHHH-hhccccc--cccC--ChHH---HHHHHH-HHhhCCCCCCEEEE---eCChHHHHHHHHHHHHhcc
Q 011777 112 HCHPDVLNAIFEQS-KLLQHAT--TIYL--HHAI---ADFAEA-LASKMPGNLKVVYF---VNSGTEANELAMLMARLST 179 (477)
Q Consensus 112 h~~p~v~~Av~~~l-~~~~~~~--~~~~--~~~~---~~l~~~-La~~~~~~~~~v~~---~~sGseA~~~Al~~ar~~~ 179 (477)
+..|.|.+|+...+ .++.... .+|. +... ++++.+ ..+.+....+.+.+ .+||+.||.+++.... .
T Consensus 45 ~~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~~~~f~~~~~~~~~nv~~~SG~~AN~av~~aL~--~ 122 (475)
T PLN03226 45 FTSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFAVYTALL--Q 122 (475)
T ss_pred cCCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHHHHHhCCCcceeEEecCcCchHHHHHHHHHHhC--C
Confidence 35799999998888 4432211 1211 2233 333333 44455544333333 4899999999887553 3
Q ss_pred CCceEEEEccCc-----cCCcccccccccCCCCCCCCCCCCeeeecCCC-CcCCCCCCCHHHHHHHHHHHHhccCCCCee
Q 011777 180 GNLGMIALRNAY-----HGGSSGTIGLTALNTWKYPIPQGEIHHVVNPD-PYHGSFGSDAARYAQDLQDHIDFGTSGKVA 253 (477)
Q Consensus 180 ~~~~ii~~~~~y-----hG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~le~~i~~~~~~~~a 253 (477)
+++.|+..+-.- |++......++.... .+..+++.. ......+ .++|++++... +++
T Consensus 123 pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~--------~~~~~~y~~~~~~g~iD------~d~Le~~l~~~---~pk 185 (475)
T PLN03226 123 PHDRIMGLDLPHGGHLSHGYQTDGKKISATSI--------YFESMPYRLDESTGLID------YDKLEKKAMLF---RPK 185 (475)
T ss_pred CCCEEEECCCCcCcchhhhhhhcccccccceE--------EEEeeeeeecCCCCCcC------HHHHHHHHhhc---CCe
Confidence 567777744211 332111111111000 001111100 0001111 58888887632 344
Q ss_pred EEEe-cccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCccee--eecccccCccceE
Q 011777 254 GFIA-ETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIV--TMAKGIGNGLPLG 330 (477)
Q Consensus 254 ~vi~-epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDiv--t~sK~lg~G~pig 330 (477)
.|++ +.+.+ ...+ +++|+++|++||++|++|++|. +|..+....... .+ ..|++ |++|+|.|... |
T Consensus 186 lIv~~~S~~s---~~~D----~a~i~~ia~~~ga~LlvD~AH~-~Gli~~~~~~~p-~~-~~Div~~t~hK~L~GP~G-g 254 (475)
T PLN03226 186 LIIAGASAYP---RDWD----YARMRKIADKVGALLMCDMAHI-SGLVAAQEAASP-FE-YCDVVTTTTHKSLRGPRG-G 254 (475)
T ss_pred EEEEecCcCC---CccC----HHHHHHHHHHcCCEEEEEchhh-hCcccCCCCCCC-CC-CCeEEEecCcccccCCCc-e
Confidence 5555 54433 2333 7899999999999999999987 544331111111 11 36766 46799965222 7
Q ss_pred EEEeCHHHH-----------Hh---hccc-ccccCCCCcHHHHHHHHHHHHhhchh---hHHHHHHHHHHHHHHHHHHHH
Q 011777 331 AVVTTPEIA-----------NV---MAQK-IQFNTFGGNPVCSAGGLAVLRVIDKE---RRQAHCADVGSHLLGRLRTLQ 392 (477)
Q Consensus 331 ~v~~~~~~~-----------~~---~~~~-~~~~t~~~~~~~~aaa~a~l~~l~~~---~~~~~~~~~~~~l~~~L~~l~ 392 (477)
++++++++. +. +... ....+-+.++...++..++++.+.+. ...+++.++.++|++.|.+.
T Consensus 255 ~I~~~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~~L~~~- 333 (475)
T PLN03226 255 MIFFRKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAALANRLMSK- 333 (475)
T ss_pred EEEEchhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHhC-
Confidence 888887544 22 2111 11122234566666677888887643 45788888888888887763
Q ss_pred HhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccC-------CCCCEEEE----eCCCCCcHH
Q 011777 393 ERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGG-------LHGNVFRI----KPPMCFTKD 461 (477)
Q Consensus 393 ~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~-------~~~~~iRi----~p~~~~t~e 461 (477)
.+.++..- ....+..+++... .....++.+.|.+.||++..+. .....+|+ .....++++
T Consensus 334 -G~~l~~~~-t~~hi~lv~~~~~-------gi~~~~~~~~L~~~~I~~nk~~~p~~~~~~~~~giRiGt~~lt~~g~~~~ 404 (475)
T PLN03226 334 -GYKLVTGG-TDNHLVLWDLRPL-------GLTGSRVEKVLDLAHITLNKNAVPGDSSALVPGGVRIGTPAMTSRGLVEK 404 (475)
T ss_pred -CCEEEcCC-CCCCEEEEEccCC-------CCCHHHHHHHHHHCCCEECCCCCCCCcccCCCCCcccCcHHHHHCCCCHH
Confidence 22222211 1235556666321 1123467778888999987542 12345787 445667899
Q ss_pred HHHHHHHHHHHHHh
Q 011777 462 DADFLVDALDYSMS 475 (477)
Q Consensus 462 ~i~~~l~~l~~~l~ 475 (477)
|++++.+.|.++++
T Consensus 405 d~~~ia~~i~~~~~ 418 (475)
T PLN03226 405 DFEKVAEFLHRAVT 418 (475)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998875
No 304
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.61 E-value=2.1e-13 Score=137.23 Aligned_cols=285 Identities=15% Similarity=0.142 Sum_probs=169.6
Q ss_pred ccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCC
Q 011777 134 IYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQ 213 (477)
Q Consensus 134 ~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~ 213 (477)
++.++...+|+++|+++.+. +.+++++||+.|+..++.+ ..+++.||+....|++.......... .
T Consensus 43 r~~~p~~~~le~~la~l~g~--~~~l~~~sG~~al~~~l~l---l~~Gd~Vl~~~~~y~~~~~~~~~~~~---------~ 108 (378)
T TIGR01329 43 RSGNPTRTALESLLAKLDKA--DRAFAFSSGMAALDVITRL---LNNGDEIIAGDDLYGGTDRLLTQVVP---------R 108 (378)
T ss_pred CCCChHHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHH---hCCCCEEEEcCCCchHHHHHHHHHHH---------H
Confidence 34567788999999998865 5678889999999877652 24567888888777654221100000 0
Q ss_pred CCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCc
Q 011777 214 GEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEV 293 (477)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv 293 (477)
.|+.....+. . | .++++++++ +++++|++|.+.++.|.+.+ +++|.++|++||+++|+|++
T Consensus 109 ~G~~v~~vd~------~-d----~~~le~~i~----~~tklv~le~psnptg~v~d----l~~I~~la~~~g~~vivD~a 169 (378)
T TIGR01329 109 SGVVVVHVDT------T-D----LDKVKAALG----PKTKLVLLESPTNPLQKIVD----IRKISEMAHAQNALVVVDNT 169 (378)
T ss_pred cCcEEEEeCC------C-C----HHHHHHhcC----cCceEEEEECCCCCCCeeec----HHHHHHHHHHcCCEEEEECC
Confidence 1222222211 0 1 467887775 46789999988888887776 99999999999999999999
Q ss_pred ccCccCCCCCCccccccCCCccee--eecccccC--ccceEEEEeC-HHHHHhhcccccccCCCCcHHHHHHHHHHHHhh
Q 011777 294 QTGFGRTGSHYWGFETQGVIPDIV--TMAKGIGN--GLPLGAVVTT-PEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVI 368 (477)
Q Consensus 294 ~~gfgr~G~~~~~~~~~gv~pDiv--t~sK~lg~--G~pig~v~~~-~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l 368 (477)
|.. +... .. + +...|++ +++|.++| +...|+++++ +++.+.+...........++..+...+..++.+
T Consensus 170 ~~~-~~~~-~~--l---~~g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~~~~l~tl 242 (378)
T TIGR01329 170 MMS-PLLC-NP--L---ELGADIVYHSATKFLAGHSDVMAGVLAVKGEEIAKKVYFLQNSTGSGLAPFDCWLLLRGIKTL 242 (378)
T ss_pred Ccc-cccC-Ch--h---hcCCcEEEEecceeccCCccceeEEEEeCcHHHHHHHHHHHHhcCCcCCHHHHHHHHccCCCH
Confidence 742 1111 11 1 2234666 46799986 3668998885 455555554322122334565554433333322
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHhCCCce------------------eeeccceeEEEEEeeCCCCCCccHHHHHHHH
Q 011777 369 DKERRQAHCADVGSHLLGRLRTLQERHDIIG------------------DVRGRGLMVGMELVTDRKEKTPAKAETAVLF 430 (477)
Q Consensus 369 ~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~------------------~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~ 430 (477)
+...++..++...+.+.|++ ++.+. ...+.|.++.|++ .+ .....++.
T Consensus 243 --~~R~e~~~~na~~la~~L~~----~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~-~~-------~~~~~~~~ 308 (378)
T TIGR01329 243 --AIRIEKQQENARAIAMFLST----HPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFET-GS-------VALSKRLV 308 (378)
T ss_pred --HHHHHHHHHHHHHHHHHHHh----CCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEE-CC-------HHHHHHHH
Confidence 22344445555555555542 33211 1235677888887 21 12245677
Q ss_pred HHHHHcCceeeccC-------------------------CCCCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 431 EKLRELGVLVGKGG-------------------------LHGNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 431 ~~l~~~Gv~v~~~~-------------------------~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
+.|...++.+..|+ ...+.+||+..+ ||.+.+++-|++++++
T Consensus 309 ~~L~~~~i~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~~ 375 (378)
T TIGR01329 309 EATKLFSITVSFGSVNSLISMPCFMSHASIPAEVREERGLPEDLVRLSVGI----EDVDDLISDLDIAFVT 375 (378)
T ss_pred HhCcCcccccCCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHHh
Confidence 77755555444331 123678997765 4556666666666653
No 305
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.61 E-value=3.7e-13 Score=147.72 Aligned_cols=350 Identities=15% Similarity=0.099 Sum_probs=202.2
Q ss_pred CEEEeecCCcccccCCCCCHHHHHH-HHHHHhhc---cccc---cccCChHHHHHHHHHHhhCCCCCC--EEEEeCChHH
Q 011777 96 RRYLDAFAGIVTVSCGHCHPDVLNA-IFEQSKLL---QHAT---TIYLHHAIADFAEALASKMPGNLK--VVYFVNSGTE 166 (477)
Q Consensus 96 ~~ylD~~~g~~~~~lGh~~p~v~~A-v~~~l~~~---~~~~---~~~~~~~~~~l~~~La~~~~~~~~--~v~~~~sGse 166 (477)
..|||..+... ..|.++++ +.+.+... .|.. .........+.+++++++++.+.+ .|+||+|+|+
T Consensus 35 ~iYLD~Aatt~------~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT~ 108 (805)
T PLN02724 35 VVYLDHAGATL------YSESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYFNAPPSDYACVFTSGATA 108 (805)
T ss_pred CEeEeCCCCCC------CCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHhCCCccceEEEEeCChHH
Confidence 58999876543 34444444 44444432 1111 111234577888999999987544 5899999999
Q ss_pred HHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHH--HHHHHHHHH
Q 011777 167 ANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAAR--YAQDLQDHI 244 (477)
Q Consensus 167 A~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~le~~i 244 (477)
|+..+..... ..+++.||+ ....|............... .+..++.+.....+.+..... ..+++++.+
T Consensus 109 alnlva~~l~-~~~gd~Iv~-t~~eH~svl~~~~~a~~~G~-------~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~ 179 (805)
T PLN02724 109 ALKLVGETFP-WSSESHFCY-TLENHNSVLGIREYALEKGA-------AAIAVDIEEAANQPTNSQGSVVVKSRGLQRRN 179 (805)
T ss_pred HHHHHHHHCC-CCCCCeEEE-eeccccchHHHHHHHHHcCC-------eEEeccchhccccccccccccccchhhhhhhh
Confidence 9998876432 334556665 45555443322211100000 111221110000000000000 013454443
Q ss_pred h----c--cCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHh--------CcEEEEcCcccCccCCCCCCcccccc
Q 011777 245 D----F--GTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKA--------GGVCIADEVQTGFGRTGSHYWGFETQ 310 (477)
Q Consensus 245 ~----~--~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~--------gillI~DEv~~gfgr~G~~~~~~~~~ 310 (477)
+ . ...+++.+|.+..+.+..|.+.| ++.+..+++.. ++++++|.+|+ +|. ..++..
T Consensus 180 ~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~p----i~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~-~g~-----~piDv~ 249 (805)
T PLN02724 180 TSKLQKREDDGEAYNLFAFPSECNFSGAKFP----LDLVKLIKDNQHSNFSKSGRWMVLLDAAKG-CGT-----SPPDLS 249 (805)
T ss_pred hhhhccccccCCCcceEEEEccccCCCCcCC----HHHHHHHHHhcccccccCcceEEEeehhhh-cCC-----CCCChh
Confidence 1 0 01235678888889999998888 66665444432 36899999997 432 234555
Q ss_pred CCCcceeeec--ccccCccceEEEEeCHHHHHhhccccccc-C---------C--------------CCcHHHHHHHHHH
Q 011777 311 GVIPDIVTMA--KGIGNGLPLGAVVTTPEIANVMAQKIQFN-T---------F--------------GGNPVCSAGGLAV 364 (477)
Q Consensus 311 gv~pDivt~s--K~lg~G~pig~v~~~~~~~~~~~~~~~~~-t---------~--------------~~~~~~~aaa~a~ 364 (477)
.+.+|.+++| |.+|+...+|++++++++.+.+.+...++ + + +.|..+.++..++
T Consensus 250 ~~~~Dfl~~S~HK~~GgP~G~G~L~vr~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aa 329 (805)
T PLN02724 250 RYPADFVVVSFYKIFGYPTGLGALLVRRDAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHG 329 (805)
T ss_pred hcCCCEEEEecceeccCCCCceEEEEehhhhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHH
Confidence 5678999887 97765567999999998877665432221 1 0 2456666667777
Q ss_pred HHhhch---hhHHHHHHHHHHHHHHHHHHHHHhCC--Cc---ee------eeccceeEEEEEeeCCCCCCccHHHHHHHH
Q 011777 365 LRVIDK---ERRQAHCADVGSHLLGRLRTLQERHD--II---GD------VRGRGLMVGMELVTDRKEKTPAKAETAVLF 430 (477)
Q Consensus 365 l~~l~~---~~~~~~~~~~~~~l~~~L~~l~~~~~--~~---~~------v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~ 430 (477)
++.+.+ +...++..++.+++.++|.++....+ .+ +. ...++.++.|.+...... ......+.
T Consensus 330 l~~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~----~v~~~~v~ 405 (805)
T PLN02724 330 FKLLNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGS----WVGHREVE 405 (805)
T ss_pred HHHHHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCC----EeCHHHHH
Confidence 777654 55678888888888888887631111 11 11 112456666666432211 01122344
Q ss_pred HHHHHcCceeeccCC-------------------------------------CCCEEEEeCCCCCcHHHHHHHHHHHHHH
Q 011777 431 EKLRELGVLVGKGGL-------------------------------------HGNVFRIKPPMCFTKDDADFLVDALDYS 473 (477)
Q Consensus 431 ~~l~~~Gv~v~~~~~-------------------------------------~~~~iRi~p~~~~t~e~i~~~l~~l~~~ 473 (477)
..+.++||.++.|.. ..+.+|+++....|.+|||++++.|++.
T Consensus 406 ~l~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~~ 485 (805)
T PLN02724 406 KLASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIISS 485 (805)
T ss_pred HHHHhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCCHHHHHHHHHHHHHH
Confidence 444567888865511 1267999999999999999999999986
Q ss_pred H
Q 011777 474 M 474 (477)
Q Consensus 474 l 474 (477)
+
T Consensus 486 ~ 486 (805)
T PLN02724 486 F 486 (805)
T ss_pred h
Confidence 5
No 306
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.61 E-value=2.6e-13 Score=136.97 Aligned_cols=308 Identities=16% Similarity=0.117 Sum_probs=176.2
Q ss_pred HHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCC
Q 011777 115 PDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGG 194 (477)
Q Consensus 115 p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~ 194 (477)
++-.+++.+.+..... +..+...+|+++++++++. +.+++++||++|+.++++... ..++++||+..++|.+.
T Consensus 14 ~~e~~~~~~~l~~~~~----~~g~~~~~le~~la~~~g~--~~~v~~~sgt~al~lal~al~-~~~Gd~Viv~~~~~~~~ 86 (379)
T PRK11658 14 DEELAAVKEVLRSGWI----TTGPKNQALEQAFCQLTGN--QHAIAVSSATAGMHITLMALG-IGPGDEVITPSLTWVST 86 (379)
T ss_pred HHHHHHHHHHHHcCCc----cCCHhHHHHHHHHHHHhCC--CeEEEECCHHHHHHHHHHHcC-CCCCCEEEECCCcHHHH
Confidence 5567778777765322 2356788999999999865 568899999999999998552 23567899988888776
Q ss_pred cccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhH
Q 011777 195 SSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYL 274 (477)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l 274 (477)
....... |...+.++.... .+..| .+++++.+. +++++|+ |++. .|...+ +
T Consensus 87 ~~~~~~~-------------G~~~v~vd~~~~-~~~~d----~~~l~~~i~----~~tkav~--~~~~-~G~~~d----~ 137 (379)
T PRK11658 87 LNMIVLL-------------GATPVMVDVDRD-TLMVT----PEAIEAAIT----PRTKAII--PVHY-AGAPAD----L 137 (379)
T ss_pred HHHHHHc-------------CCEEEEEecCCC-cCCcC----HHHHHHhcc----cCCeEEE--EeCC-CCCcCC----H
Confidence 4333221 222222221110 11111 477888775 3566666 3333 455444 8
Q ss_pred HHHHHHHHHhCcEEEEcCccc-CccCCCCCCccccccCCCcceeeec--ccccCccceEEEEeC-HHHHHhhcccc-cc-
Q 011777 275 KLVYDIVRKAGGVCIADEVQT-GFGRTGSHYWGFETQGVIPDIVTMA--KGIGNGLPLGAVVTT-PEIANVMAQKI-QF- 348 (477)
Q Consensus 275 ~~l~~l~~~~gillI~DEv~~-gfgr~G~~~~~~~~~gv~pDivt~s--K~lg~G~pig~v~~~-~~~~~~~~~~~-~~- 348 (477)
++|.++|++||+++|+|++|+ |....| .. ...+|. ++.+|+ |.+.+| +.|+++++ +++.+.++... ++
T Consensus 138 ~~i~~~a~~~gi~vi~D~a~a~g~~~~~-~~--~g~~g~--~~~Sf~~~K~l~~g-~GG~v~~~~~~~~~~~~~~~~~G~ 211 (379)
T PRK11658 138 DAIRAIGERYGIPVIEDAAHAVGTYYKG-RH--IGARGT--AIFSFHAIKNITCA-EGGLVVTDDDELADRLRSLKFHGL 211 (379)
T ss_pred HHHHHHHHHcCCeEEEECCCccCCeECC-ee--cCCCCC--EEEeCCCCCcCccc-CceEEEECCHHHHHHHHHHHHcCC
Confidence 999999999999999999997 322223 11 122343 667776 777553 55777774 67776554321 11
Q ss_pred ----------------------cCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCc--eeee--
Q 011777 349 ----------------------NTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDII--GDVR-- 402 (477)
Q Consensus 349 ----------------------~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~--~~v~-- 402 (477)
..+.-+.+..+.++..++.+ ++..++-+++.+++.+.|.++ +.. ....
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~G~n~~~~~l~AAl~~~ql~~l--~~~~~~r~~~a~~~~~~L~~~----~~~~~~~~~~~ 285 (379)
T PRK11658 212 GVDAFDRQTQGRAPQAEVLTPGYKYNLADINAAIALVQLAKL--EALNARRREIAARYLQALADL----PFQPLSLPAWP 285 (379)
T ss_pred CcchhhhhcccCCCcceeeccccccCcCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhcCC----CCccCcCCCCC
Confidence 01112233444444444332 344555566666666666543 211 1111
Q ss_pred ccce--eEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccC----------------C-------CCCEEEEeCCCC
Q 011777 403 GRGL--MVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGG----------------L-------HGNVFRIKPPMC 457 (477)
Q Consensus 403 g~g~--~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~----------------~-------~~~~iRi~p~~~ 457 (477)
.... ++.+.+... ......+++.+.|.++||-+.... . ....+.+=....
T Consensus 286 ~~~~~~~~~~~~~~~-----~~~~~r~~~~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP~~~~ 360 (379)
T PRK11658 286 HQHAWHLFIIRVDEE-----RCGISRDALMEALKERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPD 360 (379)
T ss_pred CceeEEEEEEEECCc-----cccCCHHHHHHHHHHCCCCCcccCcCcccChhhhccCCCCCChHHHHHHhCeEEccCCCC
Confidence 1111 122222111 011124678899999998765210 0 112344422344
Q ss_pred CcHHHHHHHHHHHHHHHh
Q 011777 458 FTKDDADFLVDALDYSMS 475 (477)
Q Consensus 458 ~t~e~i~~~l~~l~~~l~ 475 (477)
.|++|+++.++.|++++.
T Consensus 361 l~~~~~~~i~~~i~~~~~ 378 (379)
T PRK11658 361 MTDADVDRVITALQQIAG 378 (379)
T ss_pred CCHHHHHHHHHHHHHHHh
Confidence 789999999999998764
No 307
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.61 E-value=6.2e-14 Score=140.28 Aligned_cols=313 Identities=15% Similarity=0.121 Sum_probs=185.0
Q ss_pred CCHHHHHHHHHHHhh---ccccccccCChHHHHHHHHHHhhCCCC-CCEEEEe-CChHHHHHHHHHHHHhccCCceEEEE
Q 011777 113 CHPDVLNAIFEQSKL---LQHATTIYLHHAIADFAEALASKMPGN-LKVVYFV-NSGTEANELAMLMARLSTGNLGMIAL 187 (477)
Q Consensus 113 ~~p~v~~Av~~~l~~---~~~~~~~~~~~~~~~l~~~La~~~~~~-~~~v~~~-~sGseA~~~Al~~ar~~~~~~~ii~~ 187 (477)
-+|+|.+|+..+... ..|.... ......+..+.|+++++.. ..+|+|+ +|||.|++.++.... .+ +.+.+
T Consensus 14 ~~~~v~~a~~~~~~~~~~~~hr~~~-f~~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l~--~~--~~l~i 88 (361)
T TIGR01366 14 VRLEQLQALTTTAASLFGTSHRQAP-VKNLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGLI--EK--KSLHL 88 (361)
T ss_pred CCHHHHHHHHhcCccccccCcCChH-HHHHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhcc--cc--cccEE
Confidence 378999998754211 1233322 2466778889999998753 2367775 779999999997442 12 23333
Q ss_pred ccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCee
Q 011777 188 RNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAV 267 (477)
Q Consensus 188 ~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~ 267 (477)
..+.||......+.... +. ..+..++.+. + +.++..+ ..+++.|.+..+.+.+|++
T Consensus 89 ~~G~~~~~~~~~a~~~~--~~-----~~~~~~~~~~------~-------~~~~~~~----~~~~~lV~~~h~et~tG~~ 144 (361)
T TIGR01366 89 SFGEFSSKFAKAVKLAP--WL-----GEPIIVTADP------G-------SAPEPQA----DPGVDVIAWAHNETSTGVA 144 (361)
T ss_pred ecCHHHHHHHHHHHhhh--cc-----CCceEEecCC------C-------CCCCCcc----CCCCCEEEEcccCCcccee
Confidence 34555544333332210 00 0112222111 1 1111111 2478888888888888988
Q ss_pred eCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCcceeeec--ccccCccceEEEEeCHHHHHhhccc
Q 011777 268 ELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMA--KGIGNGLPLGAVVTTPEIANVMAQK 345 (477)
Q Consensus 268 ~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~s--K~lg~G~pig~v~~~~~~~~~~~~~ 345 (477)
.| +++| ++++|+++|+|.+|+ +|. ....++ . .|++++| |++++--.++.++.++++.+.+...
T Consensus 145 ~p----i~~I---~~~~g~~~iVDavqs-~g~---~~idv~--~--~D~~~~s~~K~lg~~~Gl~~~~~s~~~~~~~~~~ 209 (361)
T TIGR01366 145 VP----VRRP---EGSDDALVVIDATSG-AGG---LPVDIA--E--TDVYYFAPQKNFASDGGLWLAIMSPAALERIEAI 209 (361)
T ss_pred cc----cccc---cccCCCeEEEEcCcc-ccC---CCCCHH--H--CCEEEEEchhhcCCCCceEEEEECHHHHhhhhcc
Confidence 87 5555 689999999999998 432 222222 2 5888776 9998522366777899877665421
Q ss_pred c--------------------cccCCCCcHHHHH-HHHHHHHhhchh----hHHHHHHHHHHHHHHHHHHHHHhCCCcee
Q 011777 346 I--------------------QFNTFGGNPVCSA-GGLAVLRVIDKE----RRQAHCADVGSHLLGRLRTLQERHDIIGD 400 (477)
Q Consensus 346 ~--------------------~~~t~~~~~~~~a-aa~a~l~~l~~~----~~~~~~~~~~~~l~~~L~~l~~~~~~~~~ 400 (477)
. ..+|.+.+++... +..++++.+.++ ...++.+++.+++++++.++..-......
T Consensus 210 ~~~~~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~ 289 (361)
T TIGR01366 210 AASGRWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTD 289 (361)
T ss_pred cCCCCCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCC
Confidence 1 0234444444433 555777777653 33456666677777776665311011111
Q ss_pred eeccc-eeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccC--CCCCEEEEeCCCCCcHHHHHHHHHHHHHHHhhC
Q 011777 401 VRGRG-LMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGG--LHGNVFRIKPPMCFTKDDADFLVDALDYSMSKL 477 (477)
Q Consensus 401 v~g~g-~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~--~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~l 477 (477)
..... ....+.+. + +....++.+.|.++||.+.++. ..++.+|++....+|++||++++++|+++++++
T Consensus 290 ~~~~s~~v~~v~~~-~-------g~~~~~v~~~L~~~gI~i~~~~~~l~~~~vRis~~~~~t~~di~~l~~al~~~~~~~ 361 (361)
T TIGR01366 290 PGKRSQVVGTIDFV-D-------DIDAATVAKILRANGIVDTEPYRKLGRNQLRVAMFPAIDPDDVEALTECVDWVVERL 361 (361)
T ss_pred hhhcccceEEEECC-C-------ccCHHHHHHHHHHCCCeeccCccccCCCcEEEEcCCCCCHHHHHHHHHHHHHHHhhC
Confidence 10011 11223331 1 1234568888889999987652 124689999999999999999999999998765
No 308
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.59 E-value=1.1e-12 Score=134.15 Aligned_cols=310 Identities=18% Similarity=0.109 Sum_probs=177.4
Q ss_pred HHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHH-------hccCCceEEEEcc
Q 011777 117 VLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMAR-------LSTGNLGMIALRN 189 (477)
Q Consensus 117 v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar-------~~~~~~~ii~~~~ 189 (477)
-.+++.+.+...... ..+...+|+++|+++++. +.+++++||++|+..|++.+. ...+++.||+..+
T Consensus 46 ~~~a~~~~~~~~~~~----~G~~~~~fe~~lA~~~g~--~~~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~ 119 (438)
T PRK15407 46 ELQNLVDASLDFWLT----TGRFNDAFEKKLAEFLGV--RYALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAA 119 (438)
T ss_pred HHHHHHHHHHhCccc----CChhHHHHHHHHHHHhCC--CeEEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCC
Confidence 344455555543221 234577899999999864 579999999999999998653 2345678999998
Q ss_pred CccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeC
Q 011777 190 AYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVEL 269 (477)
Q Consensus 190 ~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~ 269 (477)
+|.+........+ ...+..+... ..++.| .+++++.+. .++++|++.+..|. .
T Consensus 120 t~~a~~~~v~~~G-------------~~pv~vdvd~-~~~~id----~~~le~~i~----~~tkaVi~~~~~G~---p-- 172 (438)
T PRK15407 120 GFPTTVNPIIQNG-------------LVPVFVDVEL-PTYNID----ASLLEAAVS----PKTKAIMIAHTLGN---P-- 172 (438)
T ss_pred CcHHHHHHHHHcC-------------CEEEEEecCC-CcCCcC----HHHHHHHcC----cCCeEEEEeCCCCC---h--
Confidence 9876644433321 1211111110 112222 467777775 46788888875443 2
Q ss_pred CchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCcceeeec----ccccCccceEEEEeCHH-HHHhhcc
Q 011777 270 APGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMA----KGIGNGLPLGAVVTTPE-IANVMAQ 344 (477)
Q Consensus 270 ~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~s----K~lg~G~pig~v~~~~~-~~~~~~~ 344 (477)
..+++|.++|++||++||+|++|+ +|- .+-+ ...|-.-|+.+|| |.+..|- -|+++++.+ +.+.+..
T Consensus 173 --~dl~~I~~la~~~gi~vIeDaa~a-~G~---~~~g-~~~G~~gd~~~fSf~~~k~~~~ge-GG~l~t~d~~l~~~~~~ 244 (438)
T PRK15407 173 --FDLAAVKAFCDKHNLWLIEDNCDA-LGS---TYDG-RMTGTFGDIATLSFYPAHHITMGE-GGAVFTNDPLLKKIIES 244 (438)
T ss_pred --hhHHHHHHHHHHCCCEEEEECccc-hhh---hcCC-eeeeccCceEEEeCCCCCCccccC-ceEEEECCHHHHHHHHH
Confidence 248999999999999999999997 431 1111 1122233777766 7776432 288888644 4443321
Q ss_pred cc---------------------------------------cccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHH
Q 011777 345 KI---------------------------------------QFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLL 385 (477)
Q Consensus 345 ~~---------------------------------------~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~ 385 (477)
.. .+..+.-+.+.++.++.-|+.+ ++..++-+++.+++.
T Consensus 245 ~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~rmsel~AAig~~qL~~l--~~~~~~R~~~a~~y~ 322 (438)
T PRK15407 245 FRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDHKYTYSHLGYNLKITDMQAAIGLAQLEKL--PGFIEARKANFAYLK 322 (438)
T ss_pred HHHhCcccccccccccccccccccccccccccccccccccccccccCccHHHHHHHHHHHHHH--HHHHHHHHHHHHHHH
Confidence 10 0112233567777777777755 445566666667777
Q ss_pred HHHHHHHHhCCCceeeecc-ceeE--EEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccC-----C------------
Q 011777 386 GRLRTLQERHDIIGDVRGR-GLMV--GMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGG-----L------------ 445 (477)
Q Consensus 386 ~~L~~l~~~~~~~~~v~g~-g~~~--~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~-----~------------ 445 (477)
+.|..+...........+. ..++ .+.+... . ....+++.+.|.++||-..... .
T Consensus 323 ~~L~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~----~~~Rd~l~~~L~~~GI~~~~~~~~~~~~~p~~~~~~~~~~ 396 (438)
T PRK15407 323 EGLASLEDFLILPEATPNSDPSWFGFPITVKED--A----GFTRVELVKYLEENKIGTRLLFAGNLTRQPYFKGVKYRVV 396 (438)
T ss_pred HHhccCCCccccCcCCCCCeeEEEEEEEEECCc--C----CCCHHHHHHHHHHCCCCccccCCCccccChhhhhcCCCCC
Confidence 7665431000011111111 1222 2222111 0 1124678999999999654210 0
Q ss_pred ---------CCCEEEEeCCCCCcHHHHHHHHHHHHHHHh
Q 011777 446 ---------HGNVFRIKPPMCFTKDDADFLVDALDYSMS 475 (477)
Q Consensus 446 ---------~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~ 475 (477)
....+-+=.....|++|++..++.|+++++
T Consensus 397 ~~~P~ae~~~~~~l~LP~~~~l~~~~v~~i~~~i~~~~~ 435 (438)
T PRK15407 397 GELTNTDRIMNDTFWIGVYPGLTEEMLDYVIEKIEEFFG 435 (438)
T ss_pred CCChHHHHHHhCeEEecCCCCCCHHHHHHHHHHHHHHHh
Confidence 011233322334589999999999998874
No 309
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.59 E-value=5.5e-13 Score=136.17 Aligned_cols=163 Identities=20% Similarity=0.199 Sum_probs=113.2
Q ss_pred cccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCC
Q 011777 133 TIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIP 212 (477)
Q Consensus 133 ~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~ 212 (477)
.+..++...+|+++|+++.+. +..++++||++|+.++++... .++++||+....|++......... .
T Consensus 58 ~r~~~p~~~~le~~lA~l~g~--~~al~~~SG~~Ai~~al~all--~pGd~VIv~~~~y~~t~~~~~~~~---------~ 124 (427)
T PRK05994 58 TRITNPTNAVLEERVAALEGG--TAALAVASGHAAQFLVFHTLL--QPGDEFIAARKLYGGSINQFGHAF---------K 124 (427)
T ss_pred ECCCCccHHHHHHHHHHHhCC--CcEEEEcCHHHHHHHHHHHHh--CCCCEEEEecCcchhHHHHHHHHH---------H
Confidence 345567788999999999865 458899999999999998663 356889999899987532211100 0
Q ss_pred CCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcC
Q 011777 213 QGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADE 292 (477)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DE 292 (477)
..|+.....+. . | .++++++++ +++++|++|.+++++|.+.+ +++|.++|++||+++|+|+
T Consensus 125 ~~G~~v~~vd~------~-d----~~~l~~ai~----~~tklV~vesp~NptG~v~d----l~~I~~la~~~gi~livD~ 185 (427)
T PRK05994 125 SFGWQVRWADA------D-D----PASFERAIT----PRTKAIFIESIANPGGTVTD----IAAIAEVAHRAGLPLIVDN 185 (427)
T ss_pred hcCcEEEEECC------C-C----HHHHHHhcC----cCCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEEC
Confidence 11222222211 0 1 467887775 46889999999899998776 8999999999999999999
Q ss_pred cccCccCCCCCCccccccCCCcceee--ecccccC-ccceEEEEe
Q 011777 293 VQTGFGRTGSHYWGFETQGVIPDIVT--MAKGIGN-GLPLGAVVT 334 (477)
Q Consensus 293 v~~gfgr~G~~~~~~~~~gv~pDivt--~sK~lg~-G~pig~v~~ 334 (477)
+|+. + +........+|+++ ++|.+++ |-.+|.++.
T Consensus 186 a~a~----~---~~~~pl~~gaDivv~S~tK~lgg~~~~~gG~v~ 223 (427)
T PRK05994 186 TLAS----P---YLIRPIEHGADIVVHSLTKFLGGHGNSMGGIIV 223 (427)
T ss_pred Cccc----c---ccCCccccCCcEEEEcCccccCCCCCcEEEEEE
Confidence 9862 2 11222345677775 6799986 556665554
No 310
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.59 E-value=2.3e-13 Score=122.71 Aligned_cols=297 Identities=15% Similarity=0.206 Sum_probs=179.7
Q ss_pred CChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCC
Q 011777 136 LHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGE 215 (477)
Q Consensus 136 ~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~ 215 (477)
+.+--.++...+++--|-..+.++...|..|.++..|+... .+|+++|+.+.++|.-++..+.-. ..+
T Consensus 67 ~d~rnk~ls~a~~~dkpLt~dnic~GvGsDE~ID~iiR~~c-~PGkeKIl~cPPtysMY~v~A~iN-----------d~e 134 (375)
T KOG0633|consen 67 PDPRNKRLSDALAQDKPLTSDNICVGVGSDELIDLIIRCVC-DPGKEKILDCPPTYSMYVVDAAIN-----------DAE 134 (375)
T ss_pred CCcccchhhhhcccCCCCCccceEEecCcHHHHHHHHhhee-cCCccceeecCCcceeEEEEeecC-----------Cce
Confidence 33334455566665555566889999999999999998664 478899999999985443322111 113
Q ss_pred eeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCccc
Q 011777 216 IHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQT 295 (477)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~ 295 (477)
+..++... .|+-+ .+.+.+.++. ...++++.+....+++|... ..+.+.+|.+.-+ ++++++||+|-
T Consensus 135 Vvkvpl~p----dF~ln----vdai~evl~~--ds~iK~~F~tSPgNPtg~~i-k~~di~KiLe~p~--nglVVvDEAYi 201 (375)
T KOG0633|consen 135 VVKVPLNP----DFSLN----VDAIAEVLEL--DSKIKCIFLTSPGNPTGSII-KEDDILKILEMPD--NGLVVVDEAYI 201 (375)
T ss_pred EEEecCCC----Ccccc----HHHHHHHHhc--cccceEEEEcCCCCCCcccc-cHHHHHHHHhCCC--CcEEEEeeeeE
Confidence 33332211 23322 3566666652 23566666665556666444 5555666655433 68999999999
Q ss_pred CccCCCCCCccccccCCCccee---eeccccc-CccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhh--c
Q 011777 296 GFGRTGSHYWGFETQGVIPDIV---TMAKGIG-NGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVI--D 369 (477)
Q Consensus 296 gfgr~G~~~~~~~~~gv~pDiv---t~sK~lg-~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l--~ 369 (477)
.|.-.++. ..+-.-.|+++ ||||++| +|+|+|+...+.++++.+.... ..|+-+..+..+|++++.-- +
T Consensus 202 dFsg~~S~---~~lV~kYpNLivlqTlSKsfGLAGiRvG~~~~~~~ia~iln~~K--aPYNiS~~~s~~AL~Als~~n~k 276 (375)
T KOG0633|consen 202 DFSGVESR---MKLVKKYPNLIVLQTLSKSFGLAGIRVGYGAFPLSIAEILNRAK--APYNISVAGSVAALAALSDSNGK 276 (375)
T ss_pred eecccccc---chHhHhCCceeehhhhhhhcCcceeEeecccccHHHHHHHHhcc--CCccccchhHHHHHHhcCcccch
Confidence 88433322 22223356666 6899999 6999999999999988877544 45555666777777777521 1
Q ss_pred h-hhHHHHHHHHHHHHHHHHHHHHHhCCCceeeec--cceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCC
Q 011777 370 K-ERRQAHCADVGSHLLGRLRTLQERHDIIGDVRG--RGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLH 446 (477)
Q Consensus 370 ~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g--~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~ 446 (477)
. ++..+-+.+.+.+|...|. ..+...+..| ...|+.+++.... .......+.+.+.+.||.++--+..
T Consensus 277 kme~~rdaiv~er~RL~keLt----~v~~~~~~~gg~daNFiLi~v~~~~-----n~~akkly~q~at~~gVvVRfrgse 347 (375)
T KOG0633|consen 277 KMEDVRDAIVRERERLFKELT----EVPFLNDYPGGSDANFILIEVTGGD-----NGMAKKLYKQDATKMGVVVRFRGSE 347 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHhh----cCccccCCCCcccccEEEEEEcCCC-----cHHHHHHHHHHHHhcceEEEEcCCc
Confidence 1 1222222222333333333 3344443332 2456666664321 1122233455666789999765432
Q ss_pred ---CCEEEEeCCCCCcHHHHHHHHHHHHHHH
Q 011777 447 ---GNVFRIKPPMCFTKDDADFLVDALDYSM 474 (477)
Q Consensus 447 ---~~~iRi~p~~~~t~e~i~~~l~~l~~~l 474 (477)
.+++|+ .+.|+|+.+-+++.|++++
T Consensus 348 ~~c~G~lRi---tvGt~EentvL~k~~K~~l 375 (375)
T KOG0633|consen 348 EGCKGYLRI---TVGTPEENTVLMKCLKQFL 375 (375)
T ss_pred cccceeEEE---EcCCcccchHHHHHHHhhC
Confidence 378999 5678899999999888753
No 311
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.59 E-value=4.6e-13 Score=134.28 Aligned_cols=237 Identities=11% Similarity=0.019 Sum_probs=142.9
Q ss_pred ccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCC
Q 011777 132 TTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPI 211 (477)
Q Consensus 132 ~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~ 211 (477)
+++..+|....|+++|+.+... +..++++||++|+..++... ..++++||+.++.|+++.........
T Consensus 58 YsR~gnPt~~~Le~~la~le~~--~~~v~~sSG~aAi~~~l~al--l~~GD~Vlv~~~~Y~~~~~l~~~~l~-------- 125 (395)
T PRK05967 58 YGTRGTPTTDALCKAIDALEGS--AGTILVPSGLAAVTVPFLGF--LSPGDHALIVDSVYYPTRHFCDTMLK-------- 125 (395)
T ss_pred cCCCCChHHHHHHHHHHHHhCC--CCEEEECcHHHHHHHHHHHh--cCCCCEEEEccCCcHHHHHHHHHHHH--------
Confidence 4456788899999999987643 34567777999999988654 23678899999999876432111100
Q ss_pred CCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEc
Q 011777 212 PQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIAD 291 (477)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~D 291 (477)
..|+....++. . + .+.++++++ +++++|++|.+.|+.+.+.+ +++|.++|+++|+++|+|
T Consensus 126 -~~Gi~v~~vd~------~-~----~e~l~~al~----~~TklV~lesPsNP~l~v~d----l~~I~~la~~~g~~vvVD 185 (395)
T PRK05967 126 -RLGVEVEYYDP------E-I----GAGIAKLMR----PNTKVVHTEAPGSNTFEMQD----IPAIAEAAHRHGAIVMMD 185 (395)
T ss_pred -hcCeEEEEeCC------C-C----HHHHHHhcC----cCceEEEEECCCCCCCcHHH----HHHHHHHHHHhCCEEEEE
Confidence 01222211110 0 1 256777775 46889999977776665554 999999999999999999
Q ss_pred CcccCccCCCCCCccccccCCCccee--eecccccC-c-cceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHh
Q 011777 292 EVQTGFGRTGSHYWGFETQGVIPDIV--TMAKGIGN-G-LPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRV 367 (477)
Q Consensus 292 Ev~~gfgr~G~~~~~~~~~gv~pDiv--t~sK~lg~-G-~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~ 367 (477)
+++.... .+.-.....|++ +.+|.++| | .-.|+++.+++..+.+........-..+|..+...+..|+.
T Consensus 186 ~t~a~p~-------~~~pl~~GaDivv~S~tKy~~Gh~d~~~G~v~~~~~~~~~l~~~~~~~G~~~~p~da~l~~rgl~T 258 (395)
T PRK05967 186 NTWATPL-------YFRPLDFGVDISIHAATKYPSGHSDILLGTVSANEKCWPQLLEAHGTLGLCAGPDDTYQILRGLRT 258 (395)
T ss_pred CCccCce-------ecChhHcCCCEEEEecccccCCCCCeeEEEEEcCHHHHHHHHHHHHHcCCCCCHHHHHHHHcCccc
Confidence 9987321 112122234555 57899997 3 77788888887666554221111122456655544444433
Q ss_pred hchhhHHHHHHHHHHHHHHHHHHHHHhCCCce------------------eeeccceeEEEEEe
Q 011777 368 IDKERRQAHCADVGSHLLGRLRTLQERHDIIG------------------DVRGRGLMVGMELV 413 (477)
Q Consensus 368 l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~------------------~v~g~g~~~~i~~~ 413 (477)
+. -..++..++...+.+.|++ +|.+. ...|.|.++.|++.
T Consensus 259 l~--lR~~~~~~na~~lA~~L~~----hp~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~ 316 (395)
T PRK05967 259 MG--IRLEHHRKSALEIARWLEG----RPDVARVLHPALPSFPGHEIWKRDFSGASGIFSFVLA 316 (395)
T ss_pred HH--HHHHHHHHHHHHHHHHHHh----CCCCcEEECCCCCCCccHHHHHHhCCCCceEEEEEEc
Confidence 21 1233334444444444443 33221 12356788888884
No 312
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.58 E-value=2.7e-13 Score=137.00 Aligned_cols=288 Identities=15% Similarity=0.103 Sum_probs=170.1
Q ss_pred cccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCC
Q 011777 133 TIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIP 212 (477)
Q Consensus 133 ~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~ 212 (477)
.+..++...+|+++|+++.+.. ..+.++||+.|+..++. . ..++++||+.++.|++..........
T Consensus 49 ~r~~~p~~~~le~~lA~l~g~~--~~v~~~sG~~ai~~~l~-~--l~~Gd~Vlv~~~~y~~~~~~~~~~~~--------- 114 (390)
T PRK08064 49 SRSGNPTREALEDIIAELEGGT--KGFAFASGMAAISTAFL-L--LSKGDHVLISEDVYGGTYRMITEVLS--------- 114 (390)
T ss_pred cCCCChhHHHHHHHHHHHhCCC--CeEEECCHHHHHHHHHH-H--hCCCCEEEEccCccchHHHHHHHHHH---------
Confidence 3455788899999999998654 35667999999988885 2 23567899998888765432111100
Q ss_pred CCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcC
Q 011777 213 QGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADE 292 (477)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DE 292 (477)
..|+....++. . | .+++++.++ +++++|++|..+|+.|.+.+ +++|.++|+++|+++|+|+
T Consensus 115 ~~G~~v~~v~~------~-d----~~~l~~~l~----~~tklV~l~~p~NptG~~~d----l~~I~~la~~~g~~vvvD~ 175 (390)
T PRK08064 115 RFGIEHTFVDM------T-N----LEEVAQNIK----PNTKLFYVETPSNPLLKVTD----IRGVVKLAKAIGCLTFVDN 175 (390)
T ss_pred HcCCEEEEECC------C-C----HHHHHHhcC----CCceEEEEECCCCCCcEecc----HHHHHHHHHHcCCEEEEEC
Confidence 01222221111 0 1 467777665 46788999988888887776 8999999999999999999
Q ss_pred cccCccCCCCCCccccccCCCccee--eecccccC--ccceEEEEeC-HHHHHhhcccccccCCCCcHHHHHHHHHHHHh
Q 011777 293 VQTGFGRTGSHYWGFETQGVIPDIV--TMAKGIGN--GLPLGAVVTT-PEIANVMAQKIQFNTFGGNPVCSAGGLAVLRV 367 (477)
Q Consensus 293 v~~gfgr~G~~~~~~~~~gv~pDiv--t~sK~lg~--G~pig~v~~~-~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~ 367 (477)
+|..+.. . . .. .+| .|++ +++|.++| |.-.|+++++ +++.+.+...........+|..+...+..++.
T Consensus 176 a~~~~~~-~-~--~~-~~g--~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~~~~~~g~~~~~~~a~l~~~gl~t 248 (390)
T PRK08064 176 TFLTPLL-Q-K--PL-DLG--ADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLYFLQNSFGAVLGVQDCWLVLRGLKT 248 (390)
T ss_pred CCCcccc-c-C--ch-hhC--CcEEEeecceeccCCccceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHcccCc
Confidence 9864311 1 1 11 123 4666 46799975 3445766664 67877776544323333445444443333332
Q ss_pred hchhhHHHHHHHHHHHHHHHHHHHHH----hCCCce----------eeeccceeEEEEEeeCCCCCCccHHHHHHHHHHH
Q 011777 368 IDKERRQAHCADVGSHLLGRLRTLQE----RHDIIG----------DVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKL 433 (477)
Q Consensus 368 l~~~~~~~~~~~~~~~l~~~L~~l~~----~~~~~~----------~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l 433 (477)
+ ....++..++...+.+.|++... .||... ...+.|.++.+++.. ......+.
T Consensus 249 l--~~R~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~~--------~~~~~~f~--- 315 (390)
T PRK08064 249 L--HVRLEHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQS--------EEAVRQFV--- 315 (390)
T ss_pred H--HHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEECC--------HHHHHHHH---
Confidence 2 12234444444455555543210 011111 234677788888831 11222333
Q ss_pred HHcCce---eecc-------------------------CCCCCEEEEeCCCCCcHHHHHHHHHHHHHH
Q 011777 434 RELGVL---VGKG-------------------------GLHGNVFRIKPPMCFTKDDADFLVDALDYS 473 (477)
Q Consensus 434 ~~~Gv~---v~~~-------------------------~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~ 473 (477)
...++. +..| |...+.+|++..+..+++.|+.+.++|+++
T Consensus 316 ~~l~l~~~~~s~G~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~SvGle~~~dli~dl~~Al~~~ 383 (390)
T PRK08064 316 SHVKLPVFAVSLGAVESILSYPAKMSHAAMPKEERDERGITDGLLRLSVGLENVDDLIADFEQALSYV 383 (390)
T ss_pred HhCCcceEcccCCCCcceeECCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHhc
Confidence 333441 1111 112468999999998888888888888764
No 313
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.58 E-value=1.7e-13 Score=137.80 Aligned_cols=174 Identities=14% Similarity=0.057 Sum_probs=114.7
Q ss_pred cccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCC
Q 011777 131 ATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYP 210 (477)
Q Consensus 131 ~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~ 210 (477)
...++.++...+|+++++++.+. +..++++||+.|+.+++.+ ..++++||+.++.|++..........
T Consensus 43 ~y~r~~~p~~~~Le~~la~l~g~--~~al~~~SG~~Al~~~l~~---l~pGd~Vi~~~~~y~~t~~~~~~~~~------- 110 (380)
T PRK06176 43 EYSRSGNPTRFALEELIADLEGG--VKGFAFASGLAGIHAVFSL---FQSGDHVLLGDDVYGGTFRLFDKVLV------- 110 (380)
T ss_pred cccCCCChhHHHHHHHHHHHhCC--CCEEEECCHHHHHHHHHHH---cCCCCEEEEcCCChhHHHHHHHHHHH-------
Confidence 34566788899999999999864 4567889999999876642 24568899988888665322111100
Q ss_pred CCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEE
Q 011777 211 IPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIA 290 (477)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~ 290 (477)
..++....++. . | .++++++++ +++++|++|..+|+.|.+.+ +++|.++|++||+++|+
T Consensus 111 --~~gi~v~~vd~------~-d----~e~l~~ai~----~~t~lV~lesP~Nptg~~~d----i~~I~~la~~~gi~viv 169 (380)
T PRK06176 111 --KNGLSCTIIDT------S-D----LSQIKKAIK----PNTKALYLETPSNPLLKITD----LAQCASVAKDHGLLTIV 169 (380)
T ss_pred --hcCeEEEEcCC------C-C----HHHHHHhcC----cCceEEEEECCCCCCceecC----HHHHHHHHHHcCCEEEE
Confidence 01222222111 0 1 467777765 46789999888888887776 89999999999999999
Q ss_pred cCcccCccCCCCCCccccccCCCcceee--ecccccC-c-cceEEEEeC-HHHHHhhcc
Q 011777 291 DEVQTGFGRTGSHYWGFETQGVIPDIVT--MAKGIGN-G-LPLGAVVTT-PEIANVMAQ 344 (477)
Q Consensus 291 DEv~~gfgr~G~~~~~~~~~gv~pDivt--~sK~lg~-G-~pig~v~~~-~~~~~~~~~ 344 (477)
|++|+... .+ .. .+...|+++ ++|.++| | .-.|+++++ +++.+.+..
T Consensus 170 D~t~a~~~-~~-~p-----~~~gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~~ 221 (380)
T PRK06176 170 DNTFATPY-YQ-NP-----LLLGADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIAF 221 (380)
T ss_pred ECCccccc-cC-Cc-----cccCCCEEEecCceeccCCccceeeEEEecHHHHHHHHHH
Confidence 99987421 12 11 133457765 5699986 4 345667774 556655543
No 314
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.58 E-value=2.6e-12 Score=129.89 Aligned_cols=313 Identities=18% Similarity=0.121 Sum_probs=179.0
Q ss_pred HHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCC
Q 011777 115 PDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGG 194 (477)
Q Consensus 115 p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~ 194 (477)
++-.+++.+.+..... +..+...++++.++++++. +..++++||++|+..+++... ..+++.||+..++|++.
T Consensus 10 ~~~~~~v~~~~~~~~~----~~g~~~~~le~~la~~~g~--~~~v~~~sgt~al~~~l~al~-~~~Gd~Viv~~~~~~~~ 82 (380)
T TIGR03588 10 QDDIDAVVEVLKSDFL----TQGPTVPAFEEALAEYVGA--KYAVAFNSATSALHIACLALG-VGPGDRVWTTPITFVAT 82 (380)
T ss_pred HHHHHHHHHHHhcCCc----cCChhHHHHHHHHHHHHCC--CeEEEEcCHHHHHHHHHHHcC-CCCCCEEEeCCcchHHH
Confidence 4557777777765322 2245578899999999865 456778899999999998552 23567899988888765
Q ss_pred cccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhH
Q 011777 195 SSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYL 274 (477)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l 274 (477)
....... |...+.++... ..+..| .+++++.++.....++++|++.. ..|...+ +
T Consensus 83 ~~~~~~~-------------G~~~~~~~~~~-~~~~~d----~~~l~~~i~~~~~~~t~~v~~~~---~~G~~~~----~ 137 (380)
T TIGR03588 83 ANCALYC-------------GAKVDFVDIDP-DTGNID----EDALEKKLAAAKGKLPKAIVPVD---FAGKSVD----M 137 (380)
T ss_pred HHHHHHc-------------CCEEEEEecCC-CcCCcC----HHHHHHHhhcccCCCceEEEEeC---CCCccCC----H
Confidence 4332221 22222211100 011111 47788877632123566666432 2454444 8
Q ss_pred HHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCC--Ccceeeec----ccccCccceEEEEe-CHHHHHhhccccc
Q 011777 275 KLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGV--IPDIVTMA----KGIGNGLPLGAVVT-TPEIANVMAQKIQ 347 (477)
Q Consensus 275 ~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv--~pDivt~s----K~lg~G~pig~v~~-~~~~~~~~~~~~~ 347 (477)
++|.++|++||+++|+|++|+ +|. . +.-...|. .-|+.++| |.++.| .-|+++. ++++.+.++....
T Consensus 138 ~~i~~l~~~~~~~lI~D~a~a-~g~---~-~~~~~~g~~~~~d~~~~S~~~~K~~~~~-~GG~v~~~~~~~~~~~~~~~~ 211 (380)
T TIGR03588 138 QAIAALAKKHGLKIIEDASHA-LGA---E-YGGKPVGNCRYADATVFSFHPVKIITTA-EGGAVTTNDEELAERMRLLRS 211 (380)
T ss_pred HHHHHHHHHcCCEEEEECCCc-ccC---c-cCCEeCCCccccceEEEecCCCCccccc-CceEEEECCHHHHHHHHHHHH
Confidence 999999999999999999998 321 1 11112233 34777766 888754 3366666 4666665532110
Q ss_pred -------------------------ccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeee
Q 011777 348 -------------------------FNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVR 402 (477)
Q Consensus 348 -------------------------~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~ 402 (477)
+..+.-+.+..+.+++.|+.+ +...++-+++.+++.+.|..+. .........
T Consensus 212 ~g~~~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~aa~g~~qL~~l--~~~~~~r~~~~~~~~~~L~~~~-~~~~~~~~~ 288 (380)
T TIGR03588 212 HGITKDPLLFEKQDEGPWYYEQQELGFNYRMTDIQAALGLSQLKKL--DRFVAKRREIAARYDRLLKDLP-YFTPLTIPL 288 (380)
T ss_pred CCCCCCcccccccccCcceeeeeccccccCccHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhcCCC-CccCCCCCC
Confidence 001122345555555556543 4456666777777777776542 111011111
Q ss_pred cc--c-eeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccC----------------C-------CCCEEEEeCCC
Q 011777 403 GR--G-LMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGG----------------L-------HGNVFRIKPPM 456 (477)
Q Consensus 403 g~--g-~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~----------------~-------~~~~iRi~p~~ 456 (477)
+. . .++.+.+... .....+++.+.|.++||.+.... . ..+.+++-...
T Consensus 289 ~~~~~~~~~~i~~~~~------~~~~r~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~ 362 (380)
T TIGR03588 289 GSKSAWHLYPILLDQE------FGCTRKEVFEALRAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHP 362 (380)
T ss_pred CCEeEEEEEEEEECCc------CCCCHHHHHHHHHHCCCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCC
Confidence 11 1 1222223110 01124678889999999775220 0 01457775566
Q ss_pred CCcHHHHHHHHHHHHHHH
Q 011777 457 CFTKDDADFLVDALDYSM 474 (477)
Q Consensus 457 ~~t~e~i~~~l~~l~~~l 474 (477)
..|++|++..++.|++++
T Consensus 363 ~l~~~dv~~i~~~l~~~~ 380 (380)
T TIGR03588 363 ALTLEQQQRVVETLRKVL 380 (380)
T ss_pred CCCHHHHHHHHHHHHHhC
Confidence 679999999999998764
No 315
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.58 E-value=8.5e-13 Score=134.61 Aligned_cols=164 Identities=21% Similarity=0.192 Sum_probs=112.8
Q ss_pred ccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCC
Q 011777 132 TTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPI 211 (477)
Q Consensus 132 ~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~ 211 (477)
+.+..++....|++.|+++.+. +..++++||++|+..++.... .++++|++..+.|++..........
T Consensus 58 y~r~~~p~~~~Le~~lA~leg~--~~al~~~sG~~Ai~~al~~ll--~~GD~Vlv~~~~y~~t~~~~~~~~~-------- 125 (431)
T PRK08248 58 YTRIMNPTTDVFEKRIAALEGG--IGALAVSSGQAAITYSILNIA--SAGDEIVSSSSLYGGTYNLFAHTLP-------- 125 (431)
T ss_pred eECCCCchHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHHh--CCCCEEEEccCchhhHHHHHHHHHH--------
Confidence 3456678899999999999864 578899999999999987542 3567898888888765322111100
Q ss_pred CCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEc
Q 011777 212 PQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIAD 291 (477)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~D 291 (477)
..|+..+.++. . | .++++++++ +++++|+++.++++.|.+.+ +++|.++|+++|+++|+|
T Consensus 126 -~~Gv~v~~vd~------~-d----~e~l~~ai~----~~tklV~l~sp~NPtG~v~d----i~~I~~la~~~gi~vIvD 185 (431)
T PRK08248 126 -KLGITVKFVDP------S-D----PENFEAAIT----DKTKALFAETIGNPKGDVLD----IEAVAAIAHEHGIPLIVD 185 (431)
T ss_pred -hCCEEEEEECC------C-C----HHHHHHhcC----CCCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEe
Confidence 01333322221 0 1 477887775 36788888888888887776 899999999999999999
Q ss_pred CcccCccCCCCCCccccccCCCccee--eecccccC-ccceEEEEe
Q 011777 292 EVQTGFGRTGSHYWGFETQGVIPDIV--TMAKGIGN-GLPLGAVVT 334 (477)
Q Consensus 292 Ev~~gfgr~G~~~~~~~~~gv~pDiv--t~sK~lg~-G~pig~v~~ 334 (477)
+++.. +... . .. ....|++ +++|.+++ |.++|++++
T Consensus 186 ~t~a~-~~~~-~--pl---~~gaDivv~S~tK~lgg~g~~~Gg~v~ 224 (431)
T PRK08248 186 NTFAS-PYLL-R--PI---EHGADIVVHSATKFIGGHGTSIGGVIV 224 (431)
T ss_pred CCCCc-cccC-C--hh---HcCCCEEEEcCccccCCCCCceEEEEE
Confidence 99751 1111 1 11 2335665 46799997 778887766
No 316
>PRK05939 hypothetical protein; Provisional
Probab=99.57 E-value=9.1e-13 Score=133.18 Aligned_cols=166 Identities=18% Similarity=0.152 Sum_probs=112.5
Q ss_pred ccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCC
Q 011777 130 HATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKY 209 (477)
Q Consensus 130 ~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~ 209 (477)
+...++.++...+|+++|+++.+. +..+.++||+.|+..++.... .++++||+.+..|++.......+..
T Consensus 39 ~~Y~r~g~p~~~~lE~~la~leg~--~~~v~~ssG~~Ai~~~l~all--~~Gd~Vv~~~~~y~~t~~~~~~l~~------ 108 (397)
T PRK05939 39 FTYARQGTPTTAALEAKITKMEGG--VGTVCFATGMAAIAAVFLTLL--RAGDHLVSSQFLFGNTNSLFGTLRG------ 108 (397)
T ss_pred CCcCCCCCHHHHHHHHHHHHHhCC--CeEEEeCCHHHHHHHHHHHHc--CCCCEEEECCCccccHHHHHHHHHh------
Confidence 334455678899999999999865 456788889999999887552 3567888887777554221111100
Q ss_pred CCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEE
Q 011777 210 PIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCI 289 (477)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI 289 (477)
.|+....++. . | .++++++++ +++++|++|.++++.|.+.+ +++|.++|++||+++|
T Consensus 109 ----~G~~v~~v~~------~-d----~e~l~~~l~----~~tklV~vesp~NptG~v~d----l~~I~~la~~~gi~li 165 (397)
T PRK05939 109 ----LGVEVTMVDA------T-D----VQNVAAAIR----PNTRMVFVETIANPGTQVAD----LAGIGALCRERGLLYV 165 (397)
T ss_pred ----cCCEEEEECC------C-C----HHHHHHhCC----CCCeEEEEECCCCCCCCHHh----HHHHHHHHHHcCCEEE
Confidence 1222222111 0 1 477888775 46789999998888887765 9999999999999999
Q ss_pred EcCcccCccCCCCCCccccccCCCccee--eecccccC-ccceEEEEeC
Q 011777 290 ADEVQTGFGRTGSHYWGFETQGVIPDIV--TMAKGIGN-GLPLGAVVTT 335 (477)
Q Consensus 290 ~DEv~~gfgr~G~~~~~~~~~gv~pDiv--t~sK~lg~-G~pig~v~~~ 335 (477)
+|++|+. + .. ++......|++ +++|.++| |..+|+++..
T Consensus 166 vD~t~a~----~-~~--~~~~~~gaDivv~S~sK~~~g~g~~igg~v~~ 207 (397)
T PRK05939 166 VDNTMTS----P-WL--FRPKDVGASLVINSLSKYIAGHGNALGGAVTD 207 (397)
T ss_pred EECCccc----c-cc--cCccccCCEEEEecCeecccCCCCeEEEEEec
Confidence 9999852 1 11 12112234555 68899997 8888887764
No 317
>PLN02509 cystathionine beta-lyase
Probab=99.55 E-value=1.9e-12 Score=132.42 Aligned_cols=215 Identities=12% Similarity=0.065 Sum_probs=134.4
Q ss_pred ccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCC
Q 011777 134 IYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQ 213 (477)
Q Consensus 134 ~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~ 213 (477)
++.++...+++++++++.+. +.+++++||+.|+.+++.+ ..+++.||+.++.|++......... ..
T Consensus 129 r~gnpt~~aLE~~lA~leg~--e~ai~~~SG~aAi~~il~l---l~~GD~VI~~~~~y~~t~~ll~~~l---------~~ 194 (464)
T PLN02509 129 RSGNPTRDALESLLAKLDKA--DRAFCFTSGMAALSAVTHL---IKNGEEIVAGDDVYGGSDRLLSQVV---------PR 194 (464)
T ss_pred CCCCHHHHHHHHHHHHHhCC--CEEEEeCcHHHHHHHHHHH---hCCCCEEEEcCCchhhHHHHHHHHH---------HH
Confidence 34567899999999998753 5778889999988655532 3466789998888876532111100 00
Q ss_pred CCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCc
Q 011777 214 GEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEV 293 (477)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv 293 (477)
.|+....++. . | .+++++.+. +++++|++|.+.++.|.+.+ +++|.++|++||+++|+||+
T Consensus 195 ~G~~v~~vd~------~-d----~e~l~~ai~----~~TklV~lesPsNPtG~i~D----l~~I~~lAk~~g~~lIVD~A 255 (464)
T PLN02509 195 SGVVVKRVNT------T-N----LDEVAAAIG----PQTKLVWLESPTNPRQQISD----IRKIAEMAHAQGALVLVDNS 255 (464)
T ss_pred CCeEEEEeCC------C-C----HHHHHHhCC----cCCeEEEEECCCCCCCCHHH----HHHHHHHHHHcCCEEEEECC
Confidence 1222222111 1 1 467777765 46788999988888887655 99999999999999999999
Q ss_pred ccCccCCCCCCccccccCCCccee--eecccccC-c-cceEEEEeC-HHHHHhhcccccccCCCCcHHHHHHHHHHHHhh
Q 011777 294 QTGFGRTGSHYWGFETQGVIPDIV--TMAKGIGN-G-LPLGAVVTT-PEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVI 368 (477)
Q Consensus 294 ~~gfgr~G~~~~~~~~~gv~pDiv--t~sK~lg~-G-~pig~v~~~-~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l 368 (477)
|. .+..+ .. .+...|++ +++|.++| | .-.|+++++ +++.+.+...........+|..++.++..|+.+
T Consensus 256 ~a-~~~~~-~p-----l~~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~~~~~~g~~l~p~~A~l~lr~L~tL 328 (464)
T PLN02509 256 IM-SPVLS-RP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLCLRGIKTM 328 (464)
T ss_pred cc-ccccC-Ch-----hhcCCcEEEecCcccccCCCccceeEEEeccHHHHHHHHHHHHhcCCCcCHHHHHHHHhhhhhH
Confidence 75 22222 11 12345766 46799986 3 445777764 444443332111111224677777777777765
Q ss_pred chhhHHHHHHHHHHHHHHHHHH
Q 011777 369 DKERRQAHCADVGSHLLGRLRT 390 (477)
Q Consensus 369 ~~~~~~~~~~~~~~~l~~~L~~ 390 (477)
. ...++..++.+++.+.|++
T Consensus 329 ~--~R~~r~~~nA~~la~~L~~ 348 (464)
T PLN02509 329 A--LRIEKQQENARKIAMYLSS 348 (464)
T ss_pred H--HHHHHHHHHHHHHHHHHhc
Confidence 2 3455566666666666653
No 318
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.55 E-value=2.2e-12 Score=130.61 Aligned_cols=306 Identities=14% Similarity=0.065 Sum_probs=175.9
Q ss_pred hHHHHHHHHHHhhCCCC-CCEEEEeCChH-HHHHHHHHHHHhcc-CCceEEEEccCccCCcccccccccCCCCCCCCCCC
Q 011777 138 HAIADFAEALASKMPGN-LKVVYFVNSGT-EANELAMLMARLST-GNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQG 214 (477)
Q Consensus 138 ~~~~~l~~~La~~~~~~-~~~v~~~~sGs-eA~~~Al~~ar~~~-~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~ 214 (477)
....++.++++++++.+ .+..+++++|| .++.+++..++... +.+.||+...+ |-.+..++...+.
T Consensus 105 ~l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~t-h~S~~kAi~~~G~---------- 173 (444)
T TIGR03531 105 KLTNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRID-QKSCIKAISTAGF---------- 173 (444)
T ss_pred HHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcC-hHHHHHHHHHcCC----------
Confidence 45567778888887653 24789999999 78888888776432 34567777665 4444433333321
Q ss_pred CeeeecCCC-CcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCc
Q 011777 215 EIHHVVNPD-PYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEV 293 (477)
Q Consensus 215 ~~~~~~~~~-~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv 293 (477)
..+.++. .....+.-| .++|+++|+...++.+.+|+..|..+..|...+ +++|.++|++||+++|+|++
T Consensus 174 --~pv~Vd~~~d~~~~~iD----~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~dd----L~eIa~la~k~gI~lIvDaA 243 (444)
T TIGR03531 174 --EPRVIETVLDGDELTTD----VEDIERAIEEIGPDNILCVLSTTSCFAPRSPDD----IEEIAKICANYDIPHIVNNA 243 (444)
T ss_pred --eEEEeeeeecCcCCCcC----HHHHHHHHHhccCCCEEEEEEcCCcCCCcchhC----HHHHHHHHHHcCCEEEEECc
Confidence 1111110 001112222 588999887322245667776665444443333 99999999999999999999
Q ss_pred ccCccCCCCCCccccccCC-Ccceee--ecccccC-ccceEEEEe-CHHHHHhhcccccccCCCCcHHHHHHHHHHHHhh
Q 011777 294 QTGFGRTGSHYWGFETQGV-IPDIVT--MAKGIGN-GLPLGAVVT-TPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVI 368 (477)
Q Consensus 294 ~~gfgr~G~~~~~~~~~gv-~pDivt--~sK~lg~-G~pig~v~~-~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l 368 (477)
|......-.... -..... ..|+++ ++|.+.. |. -|.+++ ++++.+.+..... +.. .+...+.+....+...
T Consensus 244 yg~~~~~~~~~~-~~g~~~Grad~vv~s~hK~l~~pg~-Gg~I~~~d~el~~~i~~~y~-g~~-~~s~~~~~~~~ll~~G 319 (444)
T TIGR03531 244 YGLQSNKYMELI-NKAIKVGRVDAVVSSTDKNFMVPVG-GAIIYSFDENFIQEISKSYP-GRA-SASPSLDVLITLLSLG 319 (444)
T ss_pred CcCcChhhhhhh-hccccccCCCeEEEeCccCCCCCCC-EEEEEECCHHHHHHHHHhcc-CCC-CChHHHHHHHHHHHhC
Confidence 973211000000 011111 246665 4599874 33 345556 6778777764322 222 2233444444444432
Q ss_pred ch--hhHHHHHHHHHHHHHHHHHHHHHhCCC-ceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCce----ee
Q 011777 369 DK--ERRQAHCADVGSHLLGRLRTLQERHDI-IGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVL----VG 441 (477)
Q Consensus 369 ~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~-~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~----v~ 441 (477)
.+ ++++++..++.+++.+.|+++.++++. +.+++..-.-+++.+..-. ......+...|..++|- +.
T Consensus 320 ~~g~~~li~~~~~~a~~l~~~L~~l~~~~~~~~~~~~~n~is~~~~~~~~~------~~~~~~~g~~l~~~~v~g~r~v~ 393 (444)
T TIGR03531 320 SKGYLELLKERKEMYKYLKELLQKLAERHGERLLDTPENPISSAMTLSTLK------GKDPTMLGSMLYSRRVTGPRVVT 393 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcEeecCCCCceeEEEeccccc------ccCHHHHHHHHHhCCCCCceeec
Confidence 22 467778888899999999999888753 3333333333344443211 11245667777777662 22
Q ss_pred ccC-------CC---C--------CEEEEeCCCCCcHHHHHHHHHHHHHHH
Q 011777 442 KGG-------LH---G--------NVFRIKPPMCFTKDDADFLVDALDYSM 474 (477)
Q Consensus 442 ~~~-------~~---~--------~~iRi~p~~~~t~e~i~~~l~~l~~~l 474 (477)
++. .+ + .++-+.....++++|||.++++|++++
T Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~~ 444 (444)
T TIGR03531 394 NGDSKTVGGCEFKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKSL 444 (444)
T ss_pred CCCceEECCEEeecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHhhcC
Confidence 321 01 1 134445556679999999999999864
No 319
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.55 E-value=1.2e-12 Score=130.88 Aligned_cols=290 Identities=17% Similarity=0.170 Sum_probs=168.4
Q ss_pred ccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCC
Q 011777 130 HATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKY 209 (477)
Q Consensus 130 ~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~ 209 (477)
+.++++.+|....|+++|+++.++ +.++.++||..|+.+++..... .+++||+....|+|..........
T Consensus 47 ~~Y~R~gnPt~~~le~~la~Le~g--~~a~~~~SGmaAi~~~l~~ll~--~Gd~iv~~~~~Y~~t~~~~~~~l~------ 116 (386)
T PF01053_consen 47 YIYSRYGNPTVRALEQRLAALEGG--EDALLFSSGMAAISAALLALLK--PGDHIVASDDLYGGTYRLLEELLP------ 116 (386)
T ss_dssp CSBTTTC-HHHHHHHHHHHHHHT---SEEEEESSHHHHHHHHHHHHS---TTBEEEEESSSSHHHHHHHHHCHH------
T ss_pred cceeccccccHHHHHHHHHHhhcc--cceeeccchHHHHHHHHHhhcc--cCCceEecCCccCcchhhhhhhhc------
Confidence 445567789999999999999755 6788999999999988875533 567899999999875433221111
Q ss_pred CCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhC-cEE
Q 011777 210 PIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAG-GVC 288 (477)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~g-ill 288 (477)
..|+....+.. . | .++++++++ +++++|++|++.|+...+.. +++|.++|+++| +++
T Consensus 117 ---~~gv~v~~~d~------~-d----~~~l~~~l~----~~t~~v~~EspsNP~l~v~D----l~~i~~~a~~~g~~~~ 174 (386)
T PF01053_consen 117 ---RFGVEVTFVDP------T-D----LEALEAALR----PNTKLVFLESPSNPTLEVPD----LEAIAKLAKEHGDILV 174 (386)
T ss_dssp ---HTTSEEEEEST------T-S----HHHHHHHHC----TTEEEEEEESSBTTTTB-------HHHHHHHHHHTTT-EE
T ss_pred ---ccCcEEEEeCc------h-h----HHHHHhhcc----ccceEEEEEcCCCccccccc----HHHHHHHHHHhCCceE
Confidence 01333221110 0 1 578888887 48999999998888766666 999999999999 999
Q ss_pred EEcCcccCccCCCCCCccccccCCCccee--eecccccC-c-cceEEEEeCH--HHHHhhcccccccCCCCcHHHHHHHH
Q 011777 289 IADEVQTGFGRTGSHYWGFETQGVIPDIV--TMAKGIGN-G-LPLGAVVTTP--EIANVMAQKIQFNTFGGNPVCSAGGL 362 (477)
Q Consensus 289 I~DEv~~gfgr~G~~~~~~~~~gv~pDiv--t~sK~lg~-G-~pig~v~~~~--~~~~~~~~~~~~~t~~~~~~~~aaa~ 362 (477)
|+|...... +.++-.....|++ +++|-++| | .-.|+++++. ++.+.+........-..+|..+...+
T Consensus 175 vVDnT~atp-------~~~~pL~~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~~~~G~~~~p~da~ll~ 247 (386)
T PF01053_consen 175 VVDNTFATP-------YNQNPLELGADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFRRLLGATLSPFDAWLLL 247 (386)
T ss_dssp EEECTTTHT-------TTC-GGGGT-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHHHHHT-B--HHHHHHHH
T ss_pred Eeeccccce-------eeeccCcCCceEEEeeccccccCCcceeeEEEEECchhhhhhhhcchhhhcCccchHHHHHHHh
Confidence 999987521 1222222235666 57799986 4 5668888764 67766553221111122355444444
Q ss_pred HHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceee------------------eccceeEEEEEeeCCCCCCccHH
Q 011777 363 AVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDV------------------RGRGLMVGMELVTDRKEKTPAKA 424 (477)
Q Consensus 363 a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v------------------~g~g~~~~i~~~~~~~~~~~~~~ 424 (477)
..|+.+ .-..++..++...+.+.|+ ++|.+..| .|.|.++.|++... ..
T Consensus 248 rgl~Tl--~~R~~~~~~nA~~lA~~L~----~hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~~-------~~ 314 (386)
T PF01053_consen 248 RGLRTL--PLRMERQNENAEALAEFLE----EHPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKGG-------EE 314 (386)
T ss_dssp HHHTTH--HHHHHHHHHHHHHHHHHHH----TSTTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESSH-------HH
T ss_pred cCCCcH--HHHHHHHHHHHHHHHHHHH----hCCCCCeEEEcccccccceeeeeecccccCceeEEEeccc-------hh
Confidence 444432 1223444455555555444 45544322 35667889998432 12
Q ss_pred HHHHHHHHHHH--cCc--------eeecc---------------CCCCCEEEEeCCCCCcHHHHHHHHHHHHHHHh
Q 011777 425 ETAVLFEKLRE--LGV--------LVGKG---------------GLHGNVFRIKPPMCFTKDDADFLVDALDYSMS 475 (477)
Q Consensus 425 ~~~~~~~~l~~--~Gv--------~v~~~---------------~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~ 475 (477)
....+.+.|.= .|. +..|. |...+.||++..+ ||.+.+++-|+++|+
T Consensus 315 ~~~~f~~~l~l~~~~~SlGg~~SLi~~p~~~~h~~~~~e~~~~~Gi~~~liRlSvGl----Ed~~dLi~Dl~~AL~ 386 (386)
T PF01053_consen 315 AARRFLDALKLFSIAPSLGGVESLISHPASTSHRSLSPEERAEAGISDGLIRLSVGL----EDPDDLIADLEQALE 386 (386)
T ss_dssp HHHHHHHH-SSSEESSS-SSSS-EEEETTCTTTTTSCHHHHHHTTS-TTEEEEE--S----S-HHHHHHHHHHHHH
T ss_pred hhHhHHhhhhhHhhhhhcCCcccccccccchhhccCChhhhhccCCCCCeeEEEecc----CCHHHHHHHHHHhcC
Confidence 34556666531 111 11111 1224679997665 567777777777764
No 320
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.55 E-value=1.2e-12 Score=131.69 Aligned_cols=217 Identities=18% Similarity=0.105 Sum_probs=131.2
Q ss_pred ccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCC
Q 011777 132 TTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPI 211 (477)
Q Consensus 132 ~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~ 211 (477)
..++.++...+|+++|+++.+. +..++++||+.|+..++.+ ..++++||+..+.|.+..........
T Consensus 44 y~r~~~p~~~~Le~~lA~l~g~--~~~~~~~sG~aai~~~~~~---l~~Gd~Viv~~~~y~~~~~~~~~~~~-------- 110 (377)
T PRK07671 44 YSRTGNPTRAALEELIAVLEGG--HAGFAFGSGMAAITAVMML---FSSGDHVILTDDVYGGTYRVMTKVLN-------- 110 (377)
T ss_pred cCCCCChHHHHHHHHHHHHhCC--CceEEeCCHHHHHHHHHHH---hCCCCEEEECCCccchHHHHHHHHHh--------
Confidence 4456788899999999999865 4567788999888766532 23567899988888654322111100
Q ss_pred CCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEc
Q 011777 212 PQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIAD 291 (477)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~D 291 (477)
..|+....++. . | .++++++++ +++++|++|..+|+.|.+.+ +++|.++|+++|+++|+|
T Consensus 111 -~~G~~v~~v~~------~-d----~~~l~~ai~----~~tklV~le~P~NPtg~~~d----l~~I~~la~~~g~~lvvD 170 (377)
T PRK07671 111 -RFGIEHTFVDT------S-N----LEEVEEAIR----PNTKAIYVETPTNPLLKITD----IKKISTIAKEKGLLTIVD 170 (377)
T ss_pred -cCCeEEEEECC------C-C----HHHHHHhcC----CCCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEE
Confidence 01222222211 0 1 477877775 46788888887777786665 999999999999999999
Q ss_pred CcccCccCCCCCCccccccCCCccee--eecccccC-c-cceEEEEe-CHHHHHhhcccccccCCCCcHHHHHHHHHHHH
Q 011777 292 EVQTGFGRTGSHYWGFETQGVIPDIV--TMAKGIGN-G-LPLGAVVT-TPEIANVMAQKIQFNTFGGNPVCSAGGLAVLR 366 (477)
Q Consensus 292 Ev~~gfgr~G~~~~~~~~~gv~pDiv--t~sK~lg~-G-~pig~v~~-~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~ 366 (477)
|+|... ..+ .+. ....|++ +++|.++| + .-.|++++ ++++.+.+........-..++..+..++..++
T Consensus 171 ~a~~~~-~~~-~p~-----~~g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~~~~~~g~~~~~~~a~l~~~~l~ 243 (377)
T PRK07671 171 NTFMTP-YWQ-SPI-----SLGADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLHFVQNSTGGILGPQDSWLLLRGLK 243 (377)
T ss_pred CCCCcc-ccC-Chh-----hhCCeEEEecCcccccCCccceeEEEEeCcHHHHHHHHHHHHhhcCCCCHHHHHHHHcCcC
Confidence 998632 112 111 2234666 47799985 2 33455666 56677766543322222334555554444443
Q ss_pred hhchhhHHHHHHHHHHHHHHHHHH
Q 011777 367 VIDKERRQAHCADVGSHLLGRLRT 390 (477)
Q Consensus 367 ~l~~~~~~~~~~~~~~~l~~~L~~ 390 (477)
.+. -..++..++...+.+.|.+
T Consensus 244 tl~--~R~~~~~~na~~la~~L~~ 265 (377)
T PRK07671 244 TLG--IRMEEHETNSRAIAEFLNN 265 (377)
T ss_pred hHH--HHHHHHHHHHHHHHHHHHc
Confidence 322 2344445555555555543
No 321
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.55 E-value=2.1e-13 Score=121.00 Aligned_cols=167 Identities=22% Similarity=0.164 Sum_probs=113.0
Q ss_pred HHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeee
Q 011777 140 IADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHV 219 (477)
Q Consensus 140 ~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (477)
..++.+++++.++.+.+.+++++||++|++.+++.++. .+++|++.++.||+......... +....
T Consensus 2 ~~~~~~~l~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~------------g~~~~ 67 (170)
T cd01494 2 LEELEEKLARLLQPGNDKAVFVPSGTGANEAALLALLG--PGDEVIVDANGHGSRYWVAAELA------------GAKPV 67 (170)
T ss_pred HHHHHHHHHHHcCCCCCcEEEeCCcHHHHHHHHHHhCC--CCCEEEEeecccceehhhHHHhc------------CCEEE
Confidence 35788889998855567899999999999999997753 36789999999988763111111 22222
Q ss_pred cCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccC
Q 011777 220 VNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGR 299 (477)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr 299 (477)
.++....... ..+++++.+.....+++++++++.++++|...+ +++|.++|+++|+++|+|++|.++..
T Consensus 68 ~v~~~~~~~~-------~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~----~~~l~~~~~~~~~~li~D~a~~~~~~ 136 (170)
T cd01494 68 PVPVDDAGYG-------GLDVAILEELKAKPNVALIVITPNTTSGGVLVP----LKEIRKIAKEYGILLLVDAASAGGAS 136 (170)
T ss_pred EeccCCCCcc-------chhhhhhhhccccCceEEEEEecCcCCCCeEcC----HHHHHHHHHHcCCEEEEecccccccc
Confidence 2211110000 011112222222467899999999888887776 69999999999999999999997765
Q ss_pred CCCCCccccccCCCcceeeec--ccccCccceEEEEeC
Q 011777 300 TGSHYWGFETQGVIPDIVTMA--KGIGNGLPLGAVVTT 335 (477)
Q Consensus 300 ~G~~~~~~~~~gv~pDivt~s--K~lg~G~pig~v~~~ 335 (477)
.. .. .+.....+|+++.| |.+++ .+.|+++++
T Consensus 137 ~~-~~--~~~~~~~~d~~~~s~~K~~~~-~~~G~l~~~ 170 (170)
T cd01494 137 PA-PG--VLIPEGGADVVTFSLHKNLGG-EGGGVVIVK 170 (170)
T ss_pred cc-cc--cccccccCCEEEEEcccccCC-CceEEEEeC
Confidence 43 11 22233457888776 99987 788998764
No 322
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.53 E-value=2e-12 Score=129.34 Aligned_cols=315 Identities=11% Similarity=0.035 Sum_probs=175.6
Q ss_pred CCHHHHHHHHHHHhhccccccc---cC-------ChHHHHHHHHHHhhCCC-CCCEEEEeCC-hHHHHHHHHHHHHhccC
Q 011777 113 CHPDVLNAIFEQSKLLQHATTI---YL-------HHAIADFAEALASKMPG-NLKVVYFVNS-GTEANELAMLMARLSTG 180 (477)
Q Consensus 113 ~~p~v~~Av~~~l~~~~~~~~~---~~-------~~~~~~l~~~La~~~~~-~~~~v~~~~s-GseA~~~Al~~ar~~~~ 180 (477)
.++.|++|+.+.+.... ...+ .. .....+.+++++++++. +.++|+|++| ||+|++.++.......+
T Consensus 10 ~p~~V~~a~~~~~~~~~-~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~l~~~~~ 88 (355)
T cd00611 10 LPEEVLEQAQKELLDFN-GLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLNLLGDKG 88 (355)
T ss_pred CCHHHHHHHHHHHhhcc-cCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCCCC
Confidence 47899999999875421 1111 01 14467889999999875 3457888866 99999998885522111
Q ss_pred CceEEEEccCccCCccccccc-ccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecc
Q 011777 181 NLGMIALRNAYHGGSSGTIGL-TALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAET 259 (477)
Q Consensus 181 ~~~ii~~~~~yhG~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~ep 259 (477)
+..+|+ .+.|.-+ ...+.. .+. .+..+..+.. ..+.+ . .+..+..+. ++++.|.+..
T Consensus 89 ~~~~i~-~g~~~~~-~~~~a~~~g~----------~~~~~~~~~~--g~~~~-~---~~~~~~~~~----~~~~lV~~~h 146 (355)
T cd00611 89 TADYVV-TGAWSAK-AAKEAKRYGG----------VVVIVAAKEE--GKYTK-I---PDVETWDLA----PDAAYVHYCS 146 (355)
T ss_pred eEEEEE-CCHHHHH-HHHHHHhcCC----------CcEEEecccc--cCCCC-C---CCHhhcCCC----CCCCEEEEeC
Confidence 223333 2333211 110100 000 1122221110 00100 0 011112222 4667777777
Q ss_pred cCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCcceeeecccccCccceEEEEeCHHHH
Q 011777 260 IQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIGNGLPLGAVVTTPEIA 339 (477)
Q Consensus 260 i~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pig~v~~~~~~~ 339 (477)
+.+.+|.+.+ ++++.||+++++|-+|+ +|. ....++.+++ ++.+--|.+| ...+|++++++++.
T Consensus 147 ~~t~tG~~~~---------~i~~~~g~~~~VDa~qs-~g~---~~idv~~~~~--~~ss~~K~lG-P~G~g~l~~~~~~~ 210 (355)
T cd00611 147 NETIHGVEFD---------EVPDTGGVPLVADMSSN-ILS---RPIDVSKFGV--IYAGAQKNLG-PAGVTVVIVRKDLL 210 (355)
T ss_pred CcccccEEcc---------eecccCCCeEEEEcccc-ccC---CCCCHHHhCE--EEeecccccC-CCceEEEEECHHHH
Confidence 7777786532 45566999999999998 432 2333333332 3322448774 44589999999988
Q ss_pred Hhhcccc-----------cccCC-CCcHHHHHHHHHHHHhhchh----hHHHHHHHHHHHHHHHHHHHHHhCCCceeeec
Q 011777 340 NVMAQKI-----------QFNTF-GGNPVCSAGGLAVLRVIDKE----RRQAHCADVGSHLLGRLRTLQERHDIIGDVRG 403 (477)
Q Consensus 340 ~~~~~~~-----------~~~t~-~~~~~~~aaa~a~l~~l~~~----~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g 403 (477)
+.+.... ...++ +.|.....+..++|+.+.++ +..++.+++.++++++|.++..-+....+...
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~~~ 290 (355)
T cd00611 211 GKARKITPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRA 290 (355)
T ss_pred hhcccCCCCcccHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccccccCCCHHH
Confidence 7654321 11113 33455666666888887654 34555666666776666665110101111111
Q ss_pred cc-eeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHHH
Q 011777 404 RG-LMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADFLVDALDYSM 474 (477)
Q Consensus 404 ~g-~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l 474 (477)
+. ..+.+.+... .....+...+.++|+...++-...+.+|+++...+|++|||++++.|+++.
T Consensus 291 rs~~vvsf~~~~~--------~l~~~~~~~~~r~G~~~~~~~~~~g~vR~S~~~~nt~edi~~l~~al~~~~ 354 (355)
T cd00611 291 RSRMNVPFRLGKE--------ELEKEFLKEAEAAGMIGLKGHRSVGGIRASIYNALSLEGVQALADFMKEFQ 354 (355)
T ss_pred cCceEEEEEcCCh--------hhhHHHHHHHHHCCCcccCCCcccCeEEEEccCCCCHHHHHHHHHHHHHHh
Confidence 22 3344544210 112455568888999854442224789999999999999999999999853
No 323
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.53 E-value=6.8e-12 Score=116.20 Aligned_cols=315 Identities=16% Similarity=0.179 Sum_probs=187.5
Q ss_pred cccCCCCCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEE
Q 011777 107 TVSCGHCHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIA 186 (477)
Q Consensus 107 ~~~lGh~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~ 186 (477)
.+++||.||++.+-+.+.++...+. -+.. +.....+..||+.+.|.|+--... +++.+++
T Consensus 38 ~~~lgh~sPe~~qIm~~v~egikyV----------------FkT~--n~~tf~isgsGh~g~E~al~N~le--Pgd~vLv 97 (385)
T KOG2862|consen 38 RPSLGHMSPEFVQIMDEVLEGIKYV----------------FKTA--NAQTFVISGSGHSGWEAALVNLLE--PGDNVLV 97 (385)
T ss_pred CCccccCCHHHHHHHHHHHHHHHHH----------------hccC--CCceEEEecCCcchHHHHHHhhcC--CCCeEEE
Confidence 3468899999888877755543221 1111 224577899999999999875443 6778888
Q ss_pred EccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCe
Q 011777 187 LRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGA 266 (477)
Q Consensus 187 ~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~ 266 (477)
+..+-.|...+-+.-. +. ..++.+ +.++..... ++++.+.+.+ +++.+|.+...-..+|+
T Consensus 98 ~~~G~wg~ra~D~~~r----~g-----a~V~~v--~~~~G~~~~------le~i~~~lsq---h~p~~vfv~hgdsSTgV 157 (385)
T KOG2862|consen 98 VSTGTWGQRAADCARR----YG-----AEVDVV--EADIGQAVP------LEEITEKLSQ---HKPKAVFVTHGDSSTGV 157 (385)
T ss_pred EEechHHHHHHHHHHh----hC-----ceeeEE--ecCcccCcc------HHHHHHHHHh---cCCceEEEEecCccccc
Confidence 7665554322211110 00 122222 222211122 5778887774 45667777777777887
Q ss_pred eeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCcceeeecccccCccceEEEEeCHHHHHhhcccc
Q 011777 267 VELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIGNGLPLGAVVTTPEIANVMAQKI 346 (477)
Q Consensus 267 ~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg~G~pig~v~~~~~~~~~~~~~~ 346 (477)
..+ .++...++|++|+.++++|-|-+ +| | ..|.++.+|+..-...--|++++.-.++.+..++...+.++...
T Consensus 158 ~q~---~~~~~g~lc~k~~~lllVD~VaS-lg--g-t~F~mDewgVDvaytgSQKaL~aP~GLsiisfS~ka~~~~~~rK 230 (385)
T KOG2862|consen 158 LQD---LLAISGELCHKHEALLLVDTVAS-LG--G-TEFEMDEWGVDVAYTGSQKALGAPAGLSIISFSDKALEAIRDRK 230 (385)
T ss_pred cch---HHHHHHHHhhcCCeEEEEechhh-cC--C-ccceehhhcccEEEecchhhcCCCCCcceeecCHHHHHHHhhcc
Confidence 665 25677899999999999999987 33 4 56778888874433334599997445566888888888776432
Q ss_pred c-----------ccCCC-----------CcHHHH-HHHHHHHHhhchh---hHHHHHHHHHHHHHHHHHHHHHhCCCcee
Q 011777 347 Q-----------FNTFG-----------GNPVCS-AGGLAVLRVIDKE---RRQAHCADVGSHLLGRLRTLQERHDIIGD 400 (477)
Q Consensus 347 ~-----------~~t~~-----------~~~~~~-aaa~a~l~~l~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~~ 400 (477)
. .++|+ ..|+.. -+..++|+.+-++ +..++-++++++++..|+++.-+.-....
T Consensus 231 ~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~GLq~fv~~e 310 (385)
T KOG2862|consen 231 TKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEALGLQLFVVDE 310 (385)
T ss_pred CCceEEEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccceecCh
Confidence 1 11221 123333 3344677776654 44566677777888887775221110000
Q ss_pred eeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccC---CCCCEEEEeCCCC-CcHHHHHHHHHHHHHHHhh
Q 011777 401 VRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGG---LHGNVFRIKPPMC-FTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 401 v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~---~~~~~iRi~p~~~-~t~e~i~~~l~~l~~~l~~ 476 (477)
-...-..-.+ +.|...+..+++..+++++.+...++ ..+.++||..--+ .+.|.|+..++.|..++.+
T Consensus 311 ~~rlptvttv--------~vp~gvDw~dVv~~~~~~~~vei~gglg~~~gKv~RIGl~gcna~~e~i~~v~~ll~~alq~ 382 (385)
T KOG2862|consen 311 ELRLPTVTTV--------KVPYGVDWKDVVAYAMSHYVVEIGGGLGPTVGKVFRIGLLGCNANVEYIDNVVELLKLALQR 382 (385)
T ss_pred hhccCcceee--------ecCCCCCHHHHHHHHHHhcCEEeccccCCCcccEEEEEEeeccCCcHHHHHHHHHHHHHHhh
Confidence 0000001111 22444456788888888865544443 2357899964333 4678899999999888753
No 324
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.52 E-value=4.2e-12 Score=127.28 Aligned_cols=239 Identities=13% Similarity=0.039 Sum_probs=151.3
Q ss_pred ccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCC
Q 011777 130 HATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKY 209 (477)
Q Consensus 130 ~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~ 209 (477)
+.+++..+|....|+++|+++-+. +..++++||+.|+.+++... ..++++||+....|++.........
T Consensus 54 ~~YsR~~nPt~~~le~~la~LEg~--~~a~~~~SGmaAi~~~~~~l--l~~GD~Vv~~~~~Yg~t~~l~~~~l------- 122 (395)
T PRK08114 54 LFYGRRGTLTHFSLQEAMCELEGG--AGCALYPCGAAAVANAILAF--VEQGDHVLMTGTAYEPTQDFCSKIL------- 122 (395)
T ss_pred ccccCCCChhHHHHHHHHHHHhCC--CeEEEEhHHHHHHHHHHHHH--cCCCCEEEEeCCCcHHHHHHHHHHH-------
Confidence 334566789999999999998754 57888999999999988744 2356788888777776543321100
Q ss_pred CCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhC--cE
Q 011777 210 PIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAG--GV 287 (477)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~g--il 287 (477)
...|+....++. . | .++++++++ +++++|++|.+.|+.|.+.+ +++|.++|+++| ++
T Consensus 123 --~~~Gi~v~~vd~------~-d----~~~l~~~l~----~~TrlV~~EtpsNp~~~v~D----I~~Ia~ia~~~g~g~~ 181 (395)
T PRK08114 123 --SKLGVTTTWFDP------L-I----GADIAKLIQ----PNTKVVFLESPGSITMEVHD----VPAIVAAVRSVNPDAV 181 (395)
T ss_pred --HhcCcEEEEECC------C-C----HHHHHHhcC----CCceEEEEECCCCCCCEeec----HHHHHHHHHHhCCCCE
Confidence 001222211110 0 1 367888776 46899999999999998888 999999999985 99
Q ss_pred EEEcCcccCccCCCCCCccccccCCCcceee--ecccccC-c-cceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHH
Q 011777 288 CIADEVQTGFGRTGSHYWGFETQGVIPDIVT--MAKGIGN-G-LPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLA 363 (477)
Q Consensus 288 lI~DEv~~gfgr~G~~~~~~~~~gv~pDivt--~sK~lg~-G-~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a 363 (477)
+|+|.+++ +| .. ++-.....|+++ ..|.++| | .-.|.++.+++..+.+........-..+|..+...+.
T Consensus 182 lvVDnT~a----~p-~~--~~pl~~GaDivv~S~tKyl~Ghsdv~~G~v~~~~~~~~~l~~~~~~~G~~~~p~~a~l~~r 254 (395)
T PRK08114 182 IMIDNTWA----AG-VL--FKALDFGIDISIQAGTKYLVGHSDAMIGTAVANARCWEQLRENSYLMGQMVDADTAYMTSR 254 (395)
T ss_pred EEEECCCc----cc-cc--cCHHHcCCcEEEEcCcccccCCCcceeEEEEcCHHHHHHHHHHHHhccCCCCHHHHHHHHc
Confidence 99999986 23 11 343444567775 5599997 4 7788888888766655422111112335665554444
Q ss_pred HHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCce------------------eeeccceeEEEEEe
Q 011777 364 VLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIG------------------DVRGRGLMVGMELV 413 (477)
Q Consensus 364 ~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~------------------~v~g~g~~~~i~~~ 413 (477)
.|+.+. -..++..++...+.+.|++ ||.+. ...|.|.|+.+++.
T Consensus 255 gl~TL~--lR~~~~~~na~~va~~L~~----hp~V~~V~yPgl~~~p~~~~~~~~~~g~gg~~sf~l~ 316 (395)
T PRK08114 255 GLRTLG--VRLRQHEESSLKVAEWLAE----HPEVARVNHPALPGCKGHEFWKRDFTGSSGLFSFVLK 316 (395)
T ss_pred CCCcHH--HHHHHHHHHHHHHHHHHHc----CCCEeEEECCCCCCCccHHHHHhhCCCCceEEEEEec
Confidence 443321 1234444455555555543 33221 12466888888884
No 325
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.52 E-value=5.2e-12 Score=128.04 Aligned_cols=260 Identities=16% Similarity=0.057 Sum_probs=153.2
Q ss_pred CCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCcc
Q 011777 113 CHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYH 192 (477)
Q Consensus 113 ~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yh 192 (477)
...+-.+++.+.... .+.+.+..+|...+|++.++++.+. +.++.++||+.|+.+++.... ..+++||+....|.
T Consensus 37 ~~~~~~~~~~~~~~~-g~~ysR~~nPtv~~lE~~la~leg~--~~av~~~SG~aAi~~al~all--~~GD~VI~~~~~Y~ 111 (432)
T PRK06702 37 DTSDDLAALFNLEAE-GYIYTRIGNPTLAAFEQKLAELEGG--VGAVATASGQAAIMLAVLNIC--SSGDHLLCSSTVYG 111 (432)
T ss_pred CCHHHHHHHHhcccc-CceeECCCCcHHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHhc--CCCCEEEECCCchH
Confidence 344444444443322 2222334478899999999999865 468899999999999997552 46688999888887
Q ss_pred CCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCch
Q 011777 193 GGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPG 272 (477)
Q Consensus 193 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~ 272 (477)
+.......... ..|+...... ++.| .++++++|+ +++++|++|...++.+.+..
T Consensus 112 ~T~~~~~~~l~---------~~Gi~v~~vd------~~~d----~~~l~~~I~----~~Tk~I~~e~pgnP~~~v~D--- 165 (432)
T PRK06702 112 GTFNLFGVSLR---------KLGIDVTFFN------PNLT----ADEIVALAN----DKTKLVYAESLGNPAMNVLN--- 165 (432)
T ss_pred HHHHHHHHHHH---------HCCCEEEEEC------CCCC----HHHHHHhCC----cCCeEEEEEcCCCccccccC---
Confidence 65433111000 0122221110 1111 367888886 46789999987777776666
Q ss_pred hHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCccee--eecccccC-ccceE-EEEeCH----------HH
Q 011777 273 YLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIV--TMAKGIGN-GLPLG-AVVTTP----------EI 338 (477)
Q Consensus 273 ~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDiv--t~sK~lg~-G~pig-~v~~~~----------~~ 338 (477)
+++|.++|++||+++|+|+++. + +..++-+..-.||+ +++|-++| +--+| .++... ++
T Consensus 166 -i~~I~~iA~~~gi~livD~T~~----t---P~~~~pl~~GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l 237 (432)
T PRK06702 166 -FKEFSDAAKELEVPFIVDNTLA----T---PYLCQAFEHGANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPEL 237 (432)
T ss_pred -HHHHHHHHHHcCCEEEEECCCC----c---hhhCChhhcCCCEEEEccccccCCCcceeceEEEeCCCccccccccccc
Confidence 9999999999999999999874 2 22233233345655 68898886 33333 333211 11
Q ss_pred HH---------------------hhc-ccccccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHH---
Q 011777 339 AN---------------------VMA-QKIQFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQE--- 393 (477)
Q Consensus 339 ~~---------------------~~~-~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~--- 393 (477)
.+ ... ..........+|+.+..++..|+.+ +...++..++...+.+.|++...
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~sp~~a~l~~rgL~Tl--~lR~~r~~~Na~~la~~L~~~p~V~~ 315 (432)
T PRK06702 238 VEPDPSYHGVSYVQNFGAAAYIVKARVQLLRDYGNCMSPFNAYISNIGLETL--HLRMERHSENALAVAKWLADHERIEW 315 (432)
T ss_pred ccccccccccchhhccchhhHHHHHHHHHHHHccCCCCHHHHHHHHhccCcH--HHHHHHHHHHHHHHHHHHHhCCCcce
Confidence 10 000 0111123466788877777777644 23445555666666666654210
Q ss_pred -hCCCce----------ee-eccceeEEEEEe
Q 011777 394 -RHDIIG----------DV-RGRGLMVGMELV 413 (477)
Q Consensus 394 -~~~~~~----------~v-~g~g~~~~i~~~ 413 (477)
.||... .. .|.|.++.+++.
T Consensus 316 V~yPgl~~~p~~~l~~~~~~~g~gg~~sf~l~ 347 (432)
T PRK06702 316 VNYPGLDSNENYSLAQKYLKKGASGVLTFGIK 347 (432)
T ss_pred EECCCCCCCccHHHHHHhCcCCCceEEEEEec
Confidence 112111 11 456788888884
No 326
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.52 E-value=6.7e-12 Score=138.03 Aligned_cols=303 Identities=14% Similarity=0.169 Sum_probs=175.8
Q ss_pred hHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhcc---C--CceEEEEccCccCCcccccccccCCCCCCCCC
Q 011777 138 HAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLST---G--NLGMIALRNAYHGGSSGTIGLTALNTWKYPIP 212 (477)
Q Consensus 138 ~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~---~--~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~ 212 (477)
....++.++|+++++.+ .-.+..|+|+.++.+++..+|.+. | +..++....+-|+.........
T Consensus 542 ~~i~e~q~~l~eltG~d-~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~---------- 610 (954)
T PRK05367 542 ELIDQLEAWLAEITGYD-AVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMA---------- 610 (954)
T ss_pred HHHHHHHHHHHHHHCCC-CEEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHC----------
Confidence 34568889999998643 334446688888888887777542 1 1234444566666544433222
Q ss_pred CCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcC
Q 011777 213 QGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADE 292 (477)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DE 292 (477)
|+..+.++....+..+ .++|++.++.. ..++++|++......|+...+ +++|.++|+++|+++++|.
T Consensus 611 --G~~vv~v~~d~~G~iD------~~~L~~~i~~~-~~~la~V~it~pst~G~~e~~----I~eI~~i~h~~G~~v~VDg 677 (954)
T PRK05367 611 --GMKVVVVACDENGNID------LDDLRAKAEEH-ADNLAAIMITYPSTHGVFEET----IREICEIVHEHGGQVYLDG 677 (954)
T ss_pred --CCEEEEECCCCCCCcC------HHHHHHHHhcc-CCCeEEEEEEcCCCCeeecCC----HHHHHHHHHHcCCEEEEEC
Confidence 3333333222112222 57888887621 235777766543333332345 8999999999999999999
Q ss_pred cccCccCCCCCCcccccc-CCCcceeeec--cccc-----CccceEEEEeCHHHHHhhccccc--------ccCCCCcHH
Q 011777 293 VQTGFGRTGSHYWGFETQ-GVIPDIVTMA--KGIG-----NGLPLGAVVTTPEIANVMAQKIQ--------FNTFGGNPV 356 (477)
Q Consensus 293 v~~gfgr~G~~~~~~~~~-gv~pDivt~s--K~lg-----~G~pig~v~~~~~~~~~~~~~~~--------~~t~~~~~~ 356 (477)
++.+ +..+ +... ....|+++++ |.|+ ||..+|++.+++.+...+..... .++....+.
T Consensus 678 A~~~-al~~-----l~~pg~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~l~p~lpg~~v~~~~~~~~~g~v~ta~~ 751 (954)
T PRK05367 678 ANMN-AQVG-----LARPGDIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAHLAPFLPGHPVQIAGGETGIGAVSAAPF 751 (954)
T ss_pred cChh-hccC-----CCChhhcCCCEEEecCcccCCCCcCCCCCceEEEeecccccccCCCCccCcCCCCCCcCcchhHHH
Confidence 9852 1111 1111 2346888776 9885 34668899888776655543210 122222233
Q ss_pred ----HHHHHHHHHHhhchhhHHHHHH---HHHHHHHHHHHHHHHhCCCceeeecc--ceeEEEEEeeCCCCCCccHHHHH
Q 011777 357 ----CSAGGLAVLRVIDKERRQAHCA---DVGSHLLGRLRTLQERHDIIGDVRGR--GLMVGMELVTDRKEKTPAKAETA 427 (477)
Q Consensus 357 ----~~aaa~a~l~~l~~~~~~~~~~---~~~~~l~~~L~~l~~~~~~~~~v~g~--g~~~~i~~~~~~~~~~~~~~~~~ 427 (477)
....+...+..+..+.+.+..+ .+..|+.++|.+. ++....-++. -.-+.+++..-+ ........
T Consensus 752 g~al~~~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~---~~~~~~~~~~~~~~e~i~~~~~~~---~~~g~~~~ 825 (954)
T PRK05367 752 GSASILPISWMYIRMMGAEGLRQATEVAILNANYIAKRLKDH---YPVLYTGANGRVAHECILDLRPLK---ESTGITVD 825 (954)
T ss_pred HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhh---cCccccCCCCCcccceEEEeeccc---ccCCCCHH
Confidence 2222344455555566655555 7888998888763 3322110000 001223332100 01112346
Q ss_pred HHHHHHHHcCceeeccC-CCCCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 428 VLFEKLRELGVLVGKGG-LHGNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 428 ~~~~~l~~~Gv~v~~~~-~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
++.++|.+.|+...... ...+.++|+|.-..+++|||+++++|..+..+
T Consensus 826 di~krL~d~G~~~~t~~~pv~~~l~i~ptE~~s~~elDr~~~al~~i~~e 875 (954)
T PRK05367 826 DIAKRLIDYGFHAPTMSFPVAGTLMVEPTESESKAELDRFCDAMIAIRAE 875 (954)
T ss_pred HHHHHHHHCCCeEeecCCccCCEEEEEeeecCCHHHHHHHHHHHHHHHHH
Confidence 79999999999876521 12578999999999999999999999876543
No 327
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.52 E-value=5.8e-12 Score=128.53 Aligned_cols=166 Identities=21% Similarity=0.169 Sum_probs=112.6
Q ss_pred ccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCC
Q 011777 130 HATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKY 209 (477)
Q Consensus 130 ~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~ 209 (477)
+.+.++.++...+|+++++++.+. +..++++||++|+.+++.... .++++||+....|++........
T Consensus 56 ~~y~R~~~p~~~~le~~lA~l~g~--~~av~~sSGt~Al~~al~~ll--~~Gd~Vi~~~~~y~~t~~~~~~~-------- 123 (433)
T PRK08134 56 HVYSRISNPTVAVLEERVAALEGG--VGAIATASGQAALHLAIATLM--GAGSHIVASSALYGGSHNLLHYT-------- 123 (433)
T ss_pred ceeecCcChHHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHHh--CCCCEEEEeCCccHHHHHHHHHH--------
Confidence 334456678899999999999865 357899999999999987552 35678888887887643221110
Q ss_pred CCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEE
Q 011777 210 PIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCI 289 (477)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI 289 (477)
....|+.....+. + | .++++++|+ +++++|++|.+.++.|.+.+ +++|.++|++||+++|
T Consensus 124 -l~~~Gi~v~~vd~------~-d----~~~l~~~i~----~~TklV~~e~~~np~g~v~D----i~~I~~la~~~gi~li 183 (433)
T PRK08134 124 -LRRFGIETTFVKP------G-D----IDGWRAAIR----PNTRLLFGETLGNPGLEVLD----IPTVAAIAHEAGVPLL 183 (433)
T ss_pred -HhhCCeEEEEECC------C-C----HHHHHHhcC----CCCeEEEEECCCcccCcccC----HHHHHHHHHHcCCEEE
Confidence 0011333222111 0 1 478888886 46789999998888888887 9999999999999999
Q ss_pred EcCcccCccCCCCCCccccccCCCcceeee--cccccC-ccceEEEEe
Q 011777 290 ADEVQTGFGRTGSHYWGFETQGVIPDIVTM--AKGIGN-GLPLGAVVT 334 (477)
Q Consensus 290 ~DEv~~gfgr~G~~~~~~~~~gv~pDivt~--sK~lg~-G~pig~v~~ 334 (477)
+|.+|+ +| .. ........|++++ .|.++| |--+|.++.
T Consensus 184 vD~t~a----~~-~~--~~pl~~GaD~vv~S~tK~l~g~g~~~gG~v~ 224 (433)
T PRK08134 184 VDSTFT----TP-YL--LRPFEHGADLVYHSATKFLGGHGTAIGGVLV 224 (433)
T ss_pred EECCCc----cc-cc--CCchhcCCCEEEeccccccCCCCCceEEEEE
Confidence 999986 22 11 1112334577755 598886 555555544
No 328
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.52 E-value=1.8e-11 Score=132.48 Aligned_cols=300 Identities=14% Similarity=0.140 Sum_probs=187.0
Q ss_pred hHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhcc-----CCceEEEEccCccCCcccccccccCCCCCCCCC
Q 011777 138 HAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLST-----GNLGMIALRNAYHGGSSGTIGLTALNTWKYPIP 212 (477)
Q Consensus 138 ~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~-----~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~ 212 (477)
....++.++|+++++-+ ..-++.++|+.|..+++..+|.|. ++..++....+-||.........
T Consensus 530 q~i~elq~~l~eltGmd-~~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPasa~~~---------- 598 (939)
T TIGR00461 530 ELIAQLEKWLCSITGFD-AISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPASAAMA---------- 598 (939)
T ss_pred HHHHHHHHHHHHHHCCC-CcccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHHHHHHC----------
Confidence 34578999999998654 356678899999888888887752 22345555678887765443322
Q ss_pred CCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcC
Q 011777 213 QGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADE 292 (477)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DE 292 (477)
|+..+.++....+..+ +++|++.++. +..++++|++...++. |.+.++ +++|.++|+++|.++++|-
T Consensus 599 --G~~Vv~V~~d~~G~iD------le~L~~~i~~-~~~~taaV~iT~pst~-G~~e~~---I~eI~~iah~~G~~v~VDg 665 (939)
T TIGR00461 599 --GMQVVPVNCDQDGNID------LVDLKNKAEQ-HGDELAAVMVTYPSTH-GVFEPT---IQHACDIVHSFGGQVYLDG 665 (939)
T ss_pred --CCEEEEeccCCCCCcC------HHHHHHHHhh-cCCceEEEEEEeCCcC-ceeccc---HHHHHHHHHHcCCEEEEEe
Confidence 3333333322222222 5888888873 2357888888665554 544432 8999999999999999999
Q ss_pred cccC-ccCCCCCCccccc-cCCCcceeeec--cccc-----CccceEEEEeCHHHHHhhccccc----------------
Q 011777 293 VQTG-FGRTGSHYWGFET-QGVIPDIVTMA--KGIG-----NGLPLGAVVTTPEIANVMAQKIQ---------------- 347 (477)
Q Consensus 293 v~~g-fgr~G~~~~~~~~-~gv~pDivt~s--K~lg-----~G~pig~v~~~~~~~~~~~~~~~---------------- 347 (477)
+|.. .. + ... -....|+++++ |+|+ ||..+|++.+++++...+.....
T Consensus 666 Aq~~al~--~-----l~~Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~lPg~~v~~t~d~~greq~Iga~ 738 (939)
T TIGR00461 666 ANMNAQV--G-----LTSPGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSHLIPFLPKHDVVSMITGIGGSKSIGSV 738 (939)
T ss_pred cChhhCC--C-----CCCccccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhhchhhcCCCcccccccCCCCccccccc
Confidence 9852 11 1 111 12456888875 9888 56788999999876655542110
Q ss_pred ccCCCCcHHHHHHHHHHHHhhchhhH---HHHHHHHHHHHHHHHHHHHHhCCCceeeecccee---EEEEEeeCCCCCCc
Q 011777 348 FNTFGGNPVCSAGGLAVLRVIDKERR---QAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLM---VGMELVTDRKEKTP 421 (477)
Q Consensus 348 ~~t~~~~~~~~aaa~a~l~~l~~~~~---~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~---~~i~~~~~~~~~~~ 421 (477)
.+.+.++......+...|..+..+.+ .+....+..|+.++|.+ .++.... ...+.+ +.+++.. .+..
T Consensus 739 s~~~~g~a~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~---~~~~l~~-~~~~~~~hEfv~~~~~---~~~~ 811 (939)
T TIGR00461 739 SAAPYGSASILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKD---HYPILFV-GTLKHVAHECILDLRP---LKAK 811 (939)
T ss_pred cccccCcHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhc---cCccccc-CCCCceeEEEEEeccc---hhhh
Confidence 01234455555666777777766654 34455577788888876 2332221 111221 2223211 0111
Q ss_pred cHHHHHHHHHHHHHcCceeeccC-CCCCEEEEeCCCCCcHHHHHHHHHHHHHHHh
Q 011777 422 AKAETAVLFEKLRELGVLVGKGG-LHGNVFRIKPPMCFTKDDADFLVDALDYSMS 475 (477)
Q Consensus 422 ~~~~~~~~~~~l~~~Gv~v~~~~-~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~ 475 (477)
.+....++.++|.+.|++..... .-.+.+-|.|.-..|++|||++++++.++-+
T Consensus 812 ~g~~~~dIakrL~d~G~hapt~~~pv~g~lmiepTE~eskeelD~f~~al~~I~~ 866 (939)
T TIGR00461 812 TGIEAIDVAKRLQDYGFHAPTLSFPVPGTLMVEPTESESLEELDRFCDAMIAIKE 866 (939)
T ss_pred cCCCHHHHHHHHHhCCeeccccCCccCCeEEEEeeccCCHHHHHHHHHHHHHHHH
Confidence 12246789999999999864432 1124677888889999999999999976643
No 329
>PLN02880 tyrosine decarboxylase
Probab=99.51 E-value=5.5e-12 Score=130.56 Aligned_cols=318 Identities=13% Similarity=0.028 Sum_probs=177.8
Q ss_pred ChHHHHHHHHHHhhCCCCC-------CEEEEeCChHHHHHHHHHHHHhcc-------C-CceEEEEccCccCCccccccc
Q 011777 137 HHAIADFAEALASKMPGNL-------KVVYFVNSGTEANELAMLMARLST-------G-NLGMIALRNAYHGGSSGTIGL 201 (477)
Q Consensus 137 ~~~~~~l~~~La~~~~~~~-------~~v~~~~sGseA~~~Al~~ar~~~-------~-~~~ii~~~~~yhG~~~~~~~~ 201 (477)
.....++.++|+++++.+. ..-+|++||||||..|+.+||... + +..++.....-|-...-+...
T Consensus 121 ~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa~~ 200 (490)
T PLN02880 121 TELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQKACQI 200 (490)
T ss_pred HHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHHHHHHH
Confidence 4556678888888875432 136789999999999999998642 1 122343344445544433333
Q ss_pred ccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhcc--CCCCeeEEEecccCCCCCeeeCCchhHHHHHH
Q 011777 202 TALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFG--TSGKVAGFIAETIQGVGGAVELAPGYLKLVYD 279 (477)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~--~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~ 279 (477)
.+.. ...+..++.....+...+ .++|++.|++. ....+.+|+..--....|.+-| +++|.+
T Consensus 201 lGlg-------~~~v~~Vp~d~~~~~~md------~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDp----l~eI~~ 263 (490)
T PLN02880 201 AGIH-------PENCRLLKTDSSTNYALA------PELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDP----LLELGK 263 (490)
T ss_pred cCCC-------HHHEEEeecCCCcCCcCC------HHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCc----HHHHHH
Confidence 2211 112334443211111222 47787777632 2234566666655555677777 999999
Q ss_pred HHHHhCcEEEEcCcccCccCCCCCCccccccCC-Ccceeee--cccccCccceEEEEeCHH--HHHhhcccc----c---
Q 011777 280 IVRKAGGVCIADEVQTGFGRTGSHYWGFETQGV-IPDIVTM--AKGIGNGLPLGAVVTTPE--IANVMAQKI----Q--- 347 (477)
Q Consensus 280 l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv-~pDivt~--sK~lg~G~pig~v~~~~~--~~~~~~~~~----~--- 347 (477)
+|++||+++++|.+|.|+-..- ..+-....|+ ..|.+++ -|.+...++.|+++.+.. +.+.+.... +
T Consensus 264 i~~~~~iwlHVDaA~gg~~~~~-~~~~~~l~gie~aDSit~d~HKwl~~P~~~g~llvr~~~~l~~~~~~~~~Yl~~~~~ 342 (490)
T PLN02880 264 IAKSNGMWFHVDAAYAGSACIC-PEYRHYIDGVEEADSFNMNAHKWFLTNFDCSLLWVKDRNALIQSLSTNPEFLKNKAS 342 (490)
T ss_pred HHHHcCCEEEEehhhHHHHHhC-HHHHHHhcCchhcCEEEECchhhcCCCccEEEEEEeCHHHHHHHHccCHHHhcCccc
Confidence 9999999999999998763221 1111123454 5787775 499988899999988742 222221110 0
Q ss_pred --ccCC--------CCcHHHHHHHHHHHHhhchhhHHHHHH---HHHHHHHHHHHHHHHhCCCcee-eeccceeEEEEEe
Q 011777 348 --FNTF--------GGNPVCSAGGLAVLRVIDKERRQAHCA---DVGSHLLGRLRTLQERHDIIGD-VRGRGLMVGMELV 413 (477)
Q Consensus 348 --~~t~--------~~~~~~~aaa~a~l~~l~~~~~~~~~~---~~~~~l~~~L~~l~~~~~~~~~-v~g~g~~~~i~~~ 413 (477)
..++ .+..+.......+|+.+..+.+.++++ ++.+++.+.|++. +...- .+....++.+.+.
T Consensus 343 ~~~~~~~~~~~~i~~~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~----~~~el~~~~~~~iv~Fr~~ 418 (490)
T PLN02880 343 QANSVVDYKDWQIPLGRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQD----SRFEVVTPRIFSLVCFRLV 418 (490)
T ss_pred cccCCCChhccCcCCCCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcC----CCEEEecCCceEEEEEEEe
Confidence 0011 111122333445566666666666666 6677776666542 22211 1223335555553
Q ss_pred eCCCCCCccHHHHHHHHHHHHHcCceeeccCC--CCCEEEEeCCCCCc-HHHHHHHHHHHHHHHhh
Q 011777 414 TDRKEKTPAKAETAVLFEKLRELGVLVGKGGL--HGNVFRIKPPMCFT-KDDADFLVDALDYSMSK 476 (477)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~--~~~~iRi~p~~~~t-~e~i~~~l~~l~~~l~~ 476 (477)
...............+.+.|.+.|-+...... ...++|+++....| ++|++.+++.|.+...+
T Consensus 419 ~~~~~~~~~~~~n~~l~~~l~~~g~~~v~~t~~~g~~~lR~~~~n~~tt~~di~~~~~~i~~~~~~ 484 (490)
T PLN02880 419 PPKNNEDNGNKLNHDLLDAVNSSGKIFISHTVLSGKYVLRFAVGAPLTEERHVTAAWKVLQDEASK 484 (490)
T ss_pred CCCCChhhHHHHHHHHHHHHHhCCCEEEEEEEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Confidence 22111000122234677777777754433221 23579998755544 69999999999887654
No 330
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.50 E-value=5.9e-12 Score=128.31 Aligned_cols=164 Identities=20% Similarity=0.181 Sum_probs=108.9
Q ss_pred cccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCC
Q 011777 133 TIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIP 212 (477)
Q Consensus 133 ~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~ 212 (477)
.++.++...+|+++|+++.+. +..++++||+.|+.+++.... .+++.||+....|.+........ ..
T Consensus 64 sr~~~p~~~~Le~~lA~l~g~--~~av~~sSG~aAi~~al~all--~~Gd~Vv~~~~~y~~t~~~~~~~---------l~ 130 (436)
T PRK07812 64 TRIMNPTQDVVEQRIAALEGG--VAALLLASGQAAETFAILNLA--GAGDHIVSSPRLYGGTYNLFHYT---------LP 130 (436)
T ss_pred cCCCCchHHHHHHHHHHHhCC--CeEEEEccHHHHHHHHHHHHh--CCCCEEEEeCCcchHHHHHHHHH---------hh
Confidence 345578888999999999854 568899999999999986442 35678888777665432211110 01
Q ss_pred CCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcC
Q 011777 213 QGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADE 292 (477)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DE 292 (477)
..|+.....+++ . | +++++++++ +++++|++|.+.++.|.+.+ +++|.++|++||+++|+|+
T Consensus 131 ~~Gi~v~~vdd~----~--d----~e~l~~ai~----~~tklV~ie~~sNp~G~v~D----l~~I~~la~~~gi~liVD~ 192 (436)
T PRK07812 131 KLGIEVSFVEDP----D--D----LDAWRAAVR----PNTKAFFAETISNPQIDVLD----IPGVAEVAHEAGVPLIVDN 192 (436)
T ss_pred cCeEEEEEECCC----C--C----HHHHHHhCC----CCCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEEC
Confidence 113333222111 0 1 467777665 46789999999999998888 9999999999999999999
Q ss_pred cccCccCCCCCCccccccCCCccee--eecccccC-ccceEEEEe
Q 011777 293 VQTGFGRTGSHYWGFETQGVIPDIV--TMAKGIGN-GLPLGAVVT 334 (477)
Q Consensus 293 v~~gfgr~G~~~~~~~~~gv~pDiv--t~sK~lg~-G~pig~v~~ 334 (477)
++.. +... .......|++ +++|.++| |--+|.++.
T Consensus 193 t~a~-~~~~------~pl~~GaDivv~S~tK~lgg~G~~i~G~vv 230 (436)
T PRK07812 193 TIAT-PYLI------RPLEHGADIVVHSATKYLGGHGTAIAGVIV 230 (436)
T ss_pred CCcc-cccC------CchhcCCCEEEEecccccCCCCCeEEEEEE
Confidence 8762 1111 1112235665 57799986 544554444
No 331
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.50 E-value=1.7e-11 Score=122.61 Aligned_cols=346 Identities=14% Similarity=0.115 Sum_probs=183.7
Q ss_pred CCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHH
Q 011777 94 NGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAML 173 (477)
Q Consensus 94 dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~ 173 (477)
....|||+.+-.++ ++..++-...+..+.- ...-++...+|.+.++++++ .+.+++++||+.|...+..
T Consensus 36 ~~~v~iDLltDsgT-------~aMs~~q~a~~~~GDe--~yag~~s~~~lE~~va~~~G--~~~av~v~sGT~Al~ll~~ 104 (450)
T TIGR02618 36 SEDVYIDLLTDSGT-------NAMSDKQWAGLMMGDE--AYAGSRNFYHLERTVRELYG--FKYVVPTHQGRGAENLLSQ 104 (450)
T ss_pred cCceEEEcccCCCc-------HHHHHHHHHHhhhcch--hhcCCCcHHHHHHHHHHHHC--CCeEEEcCCHHHHHHHHHH
Confidence 34579999987764 4455541222222211 11235667899999999995 4789999999999886432
Q ss_pred HHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCC---CCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCC
Q 011777 174 MARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQ---GEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSG 250 (477)
Q Consensus 174 ~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~ 250 (477)
...++.+.| ..+.|...+.......+. .+ ..... .+.. ...+....++ +++|+++|+..+..
T Consensus 105 ---l~l~pGDeV-psn~~f~Tt~ahIe~~Ga-v~-vDi~~dea~~~~---~~~p~~GniD------~~~Le~aI~~~~~~ 169 (450)
T TIGR02618 105 ---IAIKPGDYV-PGNMYFTTTRYHQEKNGA-TF-VDIIIDEAHDAQ---LNIPFKGNVD------LKKLQKLIDEVGAD 169 (450)
T ss_pred ---hCCCCcCEE-CCceeHHHHHHHHHhCCe-EE-Eeeecccccccc---cCCCCCCCcC------HHHHHHHhccccCc
Confidence 222333343 334443333322222111 00 00000 0000 1112222222 58899988743333
Q ss_pred CeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCcc-----------CCCCCCccc-cccCCCcceee
Q 011777 251 KVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFG-----------RTGSHYWGF-ETQGVIPDIVT 318 (477)
Q Consensus 251 ~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfg-----------r~G~~~~~~-~~~gv~pDivt 318 (477)
+++.|.++-..+..|..+.+.+.+++|+++|++||+.||.|-.+. |+ +.+...+-+ ....-..|.++
T Consensus 170 ~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR~-~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD~~~ 248 (450)
T TIGR02618 170 KIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDATRC-VENAYFIKEREQGYEDKSIAEILKEMMSYADGCT 248 (450)
T ss_pred ccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccch-hhChhhhhcccccccCCCHHHHHHHHhccCcEEE
Confidence 455666655455443366788889999999999999999999876 31 111000000 00011346644
Q ss_pred eccccc-CccceEEEEe--CHHHHHhhccc--cc--ccCCCC-cHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHH
Q 011777 319 MAKGIG-NGLPLGAVVT--TPEIANVMAQK--IQ--FNTFGG-NPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRT 390 (477)
Q Consensus 319 ~sK~lg-~G~pig~v~~--~~~~~~~~~~~--~~--~~t~~~-~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~ 390 (477)
+ |+.- +|.|+|.+++ ++++.+.++.. .. .-|+++ ..-.+.|...+|+...++...++.....++|.++|.+
T Consensus 249 ~-S~~Kd~~~~~GG~l~~~d~~l~~k~r~~~~~~eG~~tyGgla~r~~~ala~gL~e~~~~~y~~~r~~~a~~La~~L~~ 327 (450)
T TIGR02618 249 M-SGKKDCLVNIGGFLCMNDDEMFQSAKELVVVFEGMPSYGGLAGRDMEAMAIGIREAVDYEYIEHRVKQVRYLGDKLKA 327 (450)
T ss_pred E-eeccCCCCCCceEEEeCCHHHHHHHHHHhhhcCCccccCchhhhhHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 4 4442 3446554444 67787776543 11 124444 1223334344565544555666666678888888877
Q ss_pred HHHhCCCceeeeccceeEEEEEeeC----CCCCCccHHHHHHHHHHH-HHcCcee---ecc--CC--------C--CCEE
Q 011777 391 LQERHDIIGDVRGRGLMVGMELVTD----RKEKTPAKAETAVLFEKL-RELGVLV---GKG--GL--------H--GNVF 450 (477)
Q Consensus 391 l~~~~~~~~~v~g~g~~~~i~~~~~----~~~~~~~~~~~~~~~~~l-~~~Gv~v---~~~--~~--------~--~~~i 450 (477)
. ..+++ .+..|..+.++...- +....| +..+.-.| ++-||-. +.. +. . -..+
T Consensus 328 ~--Gvpv~--~p~ggh~V~vda~~~lph~~~~~~p----~~al~~~ly~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~ 399 (450)
T TIGR02618 328 A--GVPIV--EPVGGHAVFLDARRFLPHIPQDQFP----AQSLAASIYVETGVRSMERGIVSAGRNNVTGEHHRPKLELV 399 (450)
T ss_pred C--CCccc--CCCCcceEEEEhHHhCCCCChhhCh----HHHHHHHHHHHhCccEEeecceecccCCCCCcccCCcccee
Confidence 6 33332 234567777765431 111223 23333333 3445422 111 00 0 1467
Q ss_pred EEeCCC-CCcHHHHHHHHHHHHHHHh
Q 011777 451 RIKPPM-CFTKDDADFLVDALDYSMS 475 (477)
Q Consensus 451 Ri~p~~-~~t~e~i~~~l~~l~~~l~ 475 (477)
|+..|- +.|.+++|...++|..+.+
T Consensus 400 rlaiprr~yt~~h~~~v~~~~~~~~~ 425 (450)
T TIGR02618 400 RLTIPRRVYTYAHMDVVADGIIKLYK 425 (450)
T ss_pred eeccccccccHhHHHHHHHHHHHHHh
Confidence 886554 4588999999999988765
No 332
>PRK04311 selenocysteine synthase; Provisional
Probab=99.49 E-value=1.5e-11 Score=125.81 Aligned_cols=338 Identities=15% Similarity=0.104 Sum_probs=184.3
Q ss_pred EEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccc-c---ccCChHHHHHHHHHHhhCCCCCCEEEEeCChH
Q 011777 90 LFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHAT-T---IYLHHAIADFAEALASKMPGNLKVVYFVNSGT 165 (477)
Q Consensus 90 ~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~-~---~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGs 165 (477)
++...|..|.+..+.. .-++++.+++.+.+....... . ....+....+++.++++++. +.++++|||+
T Consensus 81 vinatg~v~~tNlg~s------~l~~~v~eav~~~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~Ga--e~a~vv~sgt 152 (464)
T PRK04311 81 VINATGVVLHTNLGRA------LLSEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCALTGA--EDALVVNNNA 152 (464)
T ss_pred eecCCccEEeccCCCC------CCCHHHHHHHHHHHhcccccccchhhcccchHHHHHHHHHHHHhCC--CeEEEECCHH
Confidence 4556666666654332 147899999999886542110 0 00123356888999998854 5688999999
Q ss_pred HHHHHHHHHHHhccCCceEEEEccCcc--CCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHH
Q 011777 166 EANELAMLMARLSTGNLGMIALRNAYH--GGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDH 243 (477)
Q Consensus 166 eA~~~Al~~ar~~~~~~~ii~~~~~yh--G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~ 243 (477)
.|+..++... .++++||+.++.+. |.+...... ....|+..+.+...- .. ..++++++
T Consensus 153 aAl~l~l~~l---~~GdeVIvs~~e~~~~ggs~~i~~~---------~~~~G~~l~~v~~~~--~t------~~~dle~a 212 (464)
T PRK04311 153 AAVLLALNAL---AAGKEVIVSRGELVEIGGAFRIPDV---------MRQAGARLVEVGTTN--RT------HLRDYEQA 212 (464)
T ss_pred HHHHHHHHHh---CCCCEEEEcchhhhhcCcchhhHHH---------HHHCCcEEEEECCCC--CC------CHHHHHHh
Confidence 9999888542 35667877665332 211110000 001233322221100 00 15788888
Q ss_pred HhccCCCCeeEEEecccCCC--CC--eeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCC-----CCCccccccCCCc
Q 011777 244 IDFGTSGKVAGFIAETIQGV--GG--AVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTG-----SHYWGFETQGVIP 314 (477)
Q Consensus 244 i~~~~~~~~a~vi~epi~~~--~G--~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G-----~~~~~~~~~gv~p 314 (477)
|+ +++++|+++...+. .| ..++ +++|.++|++||+++|+|....-++-.+ ..+...+......
T Consensus 213 I~----~~TklV~~vh~sN~~i~G~~~~~d----l~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~Ga 284 (464)
T PRK04311 213 IN----ENTALLLKVHTSNYRIEGFTKEVS----LAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEPTVQELLAAGV 284 (464)
T ss_pred cC----ccCeEEEEEcCCCccccccCCcCC----HHHHHHHHHHcCCeEEEECCCcccccchhccCCCCCchhhHHhcCC
Confidence 86 45777777765442 23 2344 9999999999999999998432111111 0111112223457
Q ss_pred ceeeec--ccccCccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhc-hh-hH------------HHHHH
Q 011777 315 DIVTMA--KGIGNGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVID-KE-RR------------QAHCA 378 (477)
Q Consensus 315 Divt~s--K~lg~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~-~~-~~------------~~~~~ 378 (477)
|++++| |.++|. ..|++++++++++.+......-.+...-...++..++|.... .+ .+ .++..
T Consensus 285 Div~fSg~K~LgGp-~~G~i~g~~~li~~l~~~~~~r~lr~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~ 363 (464)
T PRK04311 285 DLVTFSGDKLLGGP-QAGIIVGKKELIARLKKHPLKRALRVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELR 363 (464)
T ss_pred cEEEecCcccccCC-ceEEEEEcHHHHHHHhhchhHHHHhcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHH
Confidence 999887 999865 478999999998877632111122222333444444444221 11 11 24455
Q ss_pred HHHHHHHHHHHHHHHh-C--CCcee--eecccee-------EEEEEeeCCCCCCccHHHHHHHHHHHHHc--CceeeccC
Q 011777 379 DVGSHLLGRLRTLQER-H--DIIGD--VRGRGLM-------VGMELVTDRKEKTPAKAETAVLFEKLREL--GVLVGKGG 444 (477)
Q Consensus 379 ~~~~~l~~~L~~l~~~-~--~~~~~--v~g~g~~-------~~i~~~~~~~~~~~~~~~~~~~~~~l~~~--Gv~v~~~~ 444 (477)
++.+.+.+.|...... . .++.+ .-|-|.+ +.+.+.. .......+.+.|++- .|+.+.
T Consensus 364 ~~A~~la~~L~~~~~~~~~~~~~~~~~~~gggs~p~~~~~~~~v~~~~-------~~~~~~~l~~~lr~~~~~i~~r~-- 434 (464)
T PRK04311 364 ARAERLAAALKAALGAAFAVEVVPSFSQVGGGSLPVDRLPSAAVTLTP-------KDRSLEALAARLRLLPPPVIGRI-- 434 (464)
T ss_pred HHHHHHHHHHHhccCCCeeEEEEEccCccCCCCCcCCCCCeEEEEEeC-------CCCCHHHHHHHHhcCCCCEEEEE--
Confidence 5566666665543110 0 01111 0112222 1233321 112246677777763 355542
Q ss_pred CCCCEEEEeCCCCCcHHHHHHHHHHHHHHHh
Q 011777 445 LHGNVFRIKPPMCFTKDDADFLVDALDYSMS 475 (477)
Q Consensus 445 ~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~ 475 (477)
..+.+.+-+ -++.++|++.++++|.+++.
T Consensus 435 -~~~~~~ld~-r~~~~~~~~~~~~~~~~~~~ 463 (464)
T PRK04311 435 -EDGRLLLDL-RTLEEEDEERLAAALLEALN 463 (464)
T ss_pred -ECCEEEEEe-CcCCHHHHHHHHHHHHHHhh
Confidence 345666664 56688999999999998764
No 333
>PLN02590 probable tyrosine decarboxylase
Probab=99.47 E-value=4.1e-10 Score=116.94 Aligned_cols=317 Identities=13% Similarity=0.037 Sum_probs=174.1
Q ss_pred hHHHHHHHHHHhhCCCCC-------CEEEEeCChHHHHHHHHHHHHhccC-------Cce-EEEEccCccCCcccccccc
Q 011777 138 HAIADFAEALASKMPGNL-------KVVYFVNSGTEANELAMLMARLSTG-------NLG-MIALRNAYHGGSSGTIGLT 202 (477)
Q Consensus 138 ~~~~~l~~~La~~~~~~~-------~~v~~~~sGseA~~~Al~~ar~~~~-------~~~-ii~~~~~yhG~~~~~~~~~ 202 (477)
....++.++|+++++.+. ..-+|++||||||..||.+||.... ..+ ++.....-|-+..-+....
T Consensus 170 ~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~KAa~il 249 (539)
T PLN02590 170 ELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRKACLIG 249 (539)
T ss_pred HHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHHHHHHHHc
Confidence 445677778888875332 2367899999999999999987421 122 3333333343332222222
Q ss_pred cCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhcc--CCCCeeEEEecccCCCCCeeeCCchhHHHHHHH
Q 011777 203 ALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFG--TSGKVAGFIAETIQGVGGAVELAPGYLKLVYDI 280 (477)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~--~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l 280 (477)
+ +....+..++........+ | .++|++.|++. ....+.+|+..--....|.+-| |++|.++
T Consensus 250 G-------lg~~~vr~Vp~d~~~~~~m--d----~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDp----l~~Ia~i 312 (539)
T PLN02590 250 G-------IHEENIRLLKTDSSTNYGM--P----PESLEEAISHDLAKGFIPFFICATVGTTSSAAVDP----LVPLGNI 312 (539)
T ss_pred C-------CCcccEEEEeCCCCCCCcC--C----HHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCC----HHHHHHH
Confidence 1 1112344444321111112 2 47788777632 1234455665555555677777 9999999
Q ss_pred HHHhCcEEEEcCcccCccCCCCCCccccccCC-Ccceeee--cccccCccceEEEEeCHH--HHHhhccc-----cc---
Q 011777 281 VRKAGGVCIADEVQTGFGRTGSHYWGFETQGV-IPDIVTM--AKGIGNGLPLGAVVTTPE--IANVMAQK-----IQ--- 347 (477)
Q Consensus 281 ~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv-~pDivt~--sK~lg~G~pig~v~~~~~--~~~~~~~~-----~~--- 347 (477)
|++||++|++|.+|.|+...-.. +..-..|+ ..|-+++ -|.+...++.|+++.+.. +.+.+... ..
T Consensus 313 ~~~~g~WlHVDaA~GG~al~~~~-~r~~~~Gie~ADSit~D~HK~l~~p~~cg~llvr~~~~l~~a~~~~~~YL~~~~~~ 391 (539)
T PLN02590 313 AKKYGIWLHVDAAYAGNACICPE-YRKFIDGIENADSFNMNAHKWLFANQTCSPLWVKDRYSLIDALKTNPEYLEFKVSK 391 (539)
T ss_pred HHHhCCeEEEecchhhhhhcChh-hHHHhcCCccCCEEEECchhhcCcCcCEEEEEecCHHHHHHHhhcCHHHhCCcccc
Confidence 99999999999999887422101 00112344 3577765 499988899999988753 33322110 00
Q ss_pred ------cc--CC-CCcHHHHHHHHHHHHhhchhhHH---HHHHHHHHHHHHHHHHHHHhCCCceeee-ccceeEEEEEee
Q 011777 348 ------FN--TF-GGNPVCSAGGLAVLRVIDKERRQ---AHCADVGSHLLGRLRTLQERHDIIGDVR-GRGLMVGMELVT 414 (477)
Q Consensus 348 ------~~--t~-~~~~~~~aaa~a~l~~l~~~~~~---~~~~~~~~~l~~~L~~l~~~~~~~~~v~-g~g~~~~i~~~~ 414 (477)
.. +. .+-.+.......+|+.+..+.+. ++..++.+++.+.|++ .+...-+. ..-.++.|.+..
T Consensus 392 ~~~~~d~~d~~i~lsRr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~----~~~fel~~~~~l~iVcFr~~~ 467 (539)
T PLN02590 392 KDTVVNYKDWQISLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQ----DPSFEVVTTRYFSLVCFRLAP 467 (539)
T ss_pred cccCCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEecCCceEEEEEEecC
Confidence 00 11 11234445555666666555544 4444455566665544 33221111 122233444422
Q ss_pred CCCCCCccHHHHHHHHHHHHHcCceeeccCC-C-CCEEEEeC-CCCCcHHHHHHHHHHHHHHHhh
Q 011777 415 DRKEKTPAKAETAVLFEKLRELGVLVGKGGL-H-GNVFRIKP-PMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~-~-~~~iRi~p-~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
.............++.+.+.+.|.+...... . ..+||++. +..++++||+++++.|.+...+
T Consensus 468 ~~~~~~~~~~ln~~l~~~l~~~G~~~vs~t~~~g~~~lR~~i~n~~T~~~dv~~~~~~i~~~a~~ 532 (539)
T PLN02590 468 VDGDEDQCNERNRELLAAVNSTGKIFISHTALSGKFVLRFAVGAPLTEEKHVTEAWQIIQKHASK 532 (539)
T ss_pred CCCCHHHHHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Confidence 1100000122346778888888865533221 1 24789865 4456899999999999887654
No 334
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.47 E-value=6.7e-11 Score=118.76 Aligned_cols=347 Identities=16% Similarity=0.105 Sum_probs=181.2
Q ss_pred CCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHH
Q 011777 94 NGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAML 173 (477)
Q Consensus 94 dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~ 173 (477)
....|||+.+-.++ +...+++...+..+.-. ..-++...+|.+.++++++. +.+++++||+.|+.++..
T Consensus 43 ~~~v~IDLlSDS~T-------~aMs~~q~a~~~vGDd~--Yagd~s~~~LE~~vAe~lG~--e~aV~v~sGTaAl~ll~~ 111 (460)
T PRK13237 43 SEDVYIDLLTDSGT-------NAMSDRQWAGMMIGDEA--YAGSRNFYHLEETVQEYYGF--KHVVPTHQGRGAENLLSR 111 (460)
T ss_pred cCcEEEECcccCCc-------hhccHHHHHHHhhcchh--hcCCCcHHHHHHHHHHHHCC--CeEEEeCCHHHHHHHHHH
Confidence 34579999988875 23333433333222111 12356678999999999954 679999999999998643
Q ss_pred HHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCee
Q 011777 174 MARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVA 253 (477)
Q Consensus 174 ~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a 253 (477)
+ ..++.++| ..+.+...+...+...+. .+ ......+........+....++ +++|+++|+..+..+++
T Consensus 112 l---~v~pGd~V-p~n~~f~Tt~ahI~~~Ga-~f-vDi~~d~a~~~~~~~p~tgnlD------~d~Le~~I~~~~~~~~~ 179 (460)
T PRK13237 112 I---AIKPGQYV-PGNMYFTTTRYHQELNGG-IF-VDIIIDEAHDAQSDHPFKGNVD------LDKLQALIDEVGAENIA 179 (460)
T ss_pred h---CCCCcCEE-CCccchHhhHHHHHhCCc-EE-EeeecccccccccCCCCCCCcC------HHHHHHHhccccCCccC
Confidence 2 22333343 222222222221211111 00 0000000000001112222222 58899988743334555
Q ss_pred EEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCcc-------CCCCCCcccc------ccCCCcceeeec
Q 011777 254 GFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFG-------RTGSHYWGFE------TQGVIPDIVTMA 320 (477)
Q Consensus 254 ~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfg-------r~G~~~~~~~------~~gv~pDivt~s 320 (477)
.+.++-..+..|..+.+.+.+++|.++|++||+.||.|-++. +| |.. .+++-. ...-.-|+++||
T Consensus 180 lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra-~gna~fI~~re~-~y~~~~i~ei~~e~~s~aD~~t~S 257 (460)
T PRK13237 180 YICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRC-VENAYFIKEREE-GYQDKSIKEIVHEMFSYADGCTMS 257 (460)
T ss_pred ceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcch-hcChhhhccccc-ccCCCcHhHHhhhccCcCcEEEEe
Confidence 555444334443366677889999999999999999999876 33 101 011111 011235777766
Q ss_pred --ccccCccce-EEEEeC-HHHHHhhccc----ccccCCCCcHH-HHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHH
Q 011777 321 --KGIGNGLPL-GAVVTT-PEIANVMAQK----IQFNTFGGNPV-CSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTL 391 (477)
Q Consensus 321 --K~lg~G~pi-g~v~~~-~~~~~~~~~~----~~~~t~~~~~~-~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l 391 (477)
|.++. ++ |+++++ +++.+.++.. ....|+++-.- -+.|....|....++++.++..+..++|.+.|.+.
T Consensus 258 ~~K~~~~--~~GG~i~t~D~eL~~~~r~~~~~~eG~~tygg~~grd~~alAvgl~E~~~~~y~~~ri~~~~~l~~~L~~~ 335 (460)
T PRK13237 258 GKKDCLV--NIGGFLAMNDEELFDEAKELVVVYEGMPSYGGMAGRDMEAMAIGIEESVQYEYIEHRVGQVRYLGEKLLAA 335 (460)
T ss_pred CCCCCCC--CCceEEEECCHHHHHHHHHhccccCCCcCCCChhhhHHHHHHhHHHhhchHHHHHHHHHHHHHHHHHHHHC
Confidence 66653 33 677664 6677776643 12235555322 22232233444444566666666777888877664
Q ss_pred HHhCCCceeeeccceeEEEEEeeC----CCCCCccHHHHHHHHHHH-HHcCceee---cc--CC--------C--CCEEE
Q 011777 392 QERHDIIGDVRGRGLMVGMELVTD----RKEKTPAKAETAVLFEKL-RELGVLVG---KG--GL--------H--GNVFR 451 (477)
Q Consensus 392 ~~~~~~~~~v~g~g~~~~i~~~~~----~~~~~~~~~~~~~~~~~l-~~~Gv~v~---~~--~~--------~--~~~iR 451 (477)
..|++. +..|.-+.++...- +....| +..+...| ++-||-.. .. +. . -..+|
T Consensus 336 --Gvpv~~--p~ggH~v~vda~~~lph~~~~~~p----~~al~~~ly~~~GiR~~e~g~~~~~~~~~~~~~~~~~~el~r 407 (460)
T PRK13237 336 --GVPIVE--PVGGHAVFLDARRFLPHLPQDQFP----AQALAAELYIESGVRSMERGIVSAGRDPKTGENHYPKLELVR 407 (460)
T ss_pred --CCceec--CCCceEEEEEhHHhCCCCCcccCh----HHHHHHHHHHHhCcCeEeecceecccCCCCCccCCCccceee
Confidence 233332 33454445543221 111223 23333333 33444221 11 00 0 14678
Q ss_pred EeCCC-CCcHHHHHHHHHHHHHHHh
Q 011777 452 IKPPM-CFTKDDADFLVDALDYSMS 475 (477)
Q Consensus 452 i~p~~-~~t~e~i~~~l~~l~~~l~ 475 (477)
+..|- +.|.+++|...++|..+.+
T Consensus 408 laiprr~yt~~h~~~v~~~~~~~~~ 432 (460)
T PRK13237 408 LTIPRRVYTYAHMDVVADSVIKLYK 432 (460)
T ss_pred eccccccccHHHHHHHHHHHHHHHH
Confidence 86554 4588999999999988765
No 335
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.47 E-value=3.7e-11 Score=129.39 Aligned_cols=298 Identities=13% Similarity=0.136 Sum_probs=178.0
Q ss_pred HHHHHHHHHHhhCCCCCCEEEE-eCChHHHHHHHHHHHHhc------cCCceEEEEccCccCCcccccccccCCCCCCCC
Q 011777 139 AIADFAEALASKMPGNLKVVYF-VNSGTEANELAMLMARLS------TGNLGMIALRNAYHGGSSGTIGLTALNTWKYPI 211 (477)
Q Consensus 139 ~~~~l~~~La~~~~~~~~~v~~-~~sGseA~~~Al~~ar~~------~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~ 211 (477)
...+|.+.|+++++ ++.+-+ -+||+.+..++++..|.| ++|++|++ ..+-||........
T Consensus 544 ~i~elq~~l~eLtG--md~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLI-p~saHgtNpasa~~---------- 610 (954)
T PRK12566 544 MIDELEAWLCAITG--FDAICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLI-PSSAHGTNPASAQM---------- 610 (954)
T ss_pred HHHHHHHHHHHHHC--CCeEeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEe-cccccccCHHHHHH----------
Confidence 34688889999984 454444 458999998888887775 34555555 45667654433222
Q ss_pred CCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEc
Q 011777 212 PQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIAD 291 (477)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~D 291 (477)
.|+..+.++....+..+ +++|++.++.. .+++++|++...+..|+... .+++|.++|+++|+++++|
T Consensus 611 --~GieVv~Vp~D~~G~iD------le~L~a~I~~~-~~~laaVmiT~Pnt~Gv~e~----~V~eI~~iah~~Galv~vD 677 (954)
T PRK12566 611 --AGMRVVIVECDPDGNVD------LDDLKAKAAAA-GDRLSCLMITYPSTHGVYEE----GIREICEVVHQHGGQVYMD 677 (954)
T ss_pred --CCCEEEEeccCCCCCcC------HHHHHHHhhcc-CCCEEEEEEEecCcCceecc----hHHHHHHHHHHcCCEEEEE
Confidence 14444443332222222 68888888632 35788887766554444323 3899999999999999999
Q ss_pred CcccCccCCCCCCccccc-cCCCcceeeec--cccc-----CccceEEEEeCHHHHHhhcccc-------------cccC
Q 011777 292 EVQTGFGRTGSHYWGFET-QGVIPDIVTMA--KGIG-----NGLPLGAVVTTPEIANVMAQKI-------------QFNT 350 (477)
Q Consensus 292 Ev~~gfgr~G~~~~~~~~-~gv~pDivt~s--K~lg-----~G~pig~v~~~~~~~~~~~~~~-------------~~~t 350 (477)
-++. .+.. .+.. -.+..|+++++ |.|+ ||.-+|.+.+++.+...+.... ....
T Consensus 678 gA~~-~a~~-----~l~~Pg~~GADi~~~s~HKtf~~P~G~GGP~vG~iav~~~L~pfLp~~P~~d~~G~~~r~ga~S~~ 751 (954)
T PRK12566 678 GANL-NAQV-----GLARPADIGADVSHMNLHKTFCIPHGGGGPGMGPIGVRAHLAPFVANHPVVPVEGPDPNNGAVSAA 751 (954)
T ss_pred eeCh-hhcc-----CCCChhhcCCCEEEecCCcccCcCccCCCCccchhhhhhhhhhhccCCCCcCCCCCCCCCCceeec
Confidence 9885 2211 1221 23456888776 9886 2456788777776665554210 1112
Q ss_pred CCCcHHHHHHHHHHHHhhchhhHHH---HHHHHHHHHHHHHHHHHHhCCCceeeeccce---eEEEEEeeCCCCCCccHH
Q 011777 351 FGGNPVCSAGGLAVLRVIDKERRQA---HCADVGSHLLGRLRTLQERHDIIGDVRGRGL---MVGMELVTDRKEKTPAKA 424 (477)
Q Consensus 351 ~~~~~~~~aaa~a~l~~l~~~~~~~---~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~---~~~i~~~~~~~~~~~~~~ 424 (477)
..++.....++...++.+..+ +.+ ....+..|++++|.+ .++.... ...+. -+.+++..-+ + ..+.
T Consensus 752 ~~gsa~~l~~A~~Yi~~lG~e-Lk~aa~~ailnAnYla~rL~~---~~~v~~~-~~~~~~~hEfii~~~~l~--~-~~g~ 823 (954)
T PRK12566 752 PWGSASILPISWMYIAMMGPQ-LADASEVAILSANYLANQLGG---AFPVLYR-GRNERVAHECILDLRPLK--A-QTGI 823 (954)
T ss_pred ccchHHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHhHh---hCCCCcC-CCCCCeeeEEEEEccccc--c-ccCC
Confidence 233444445555556655544 322 123467788888866 2343331 11122 1223322111 0 1112
Q ss_pred HHHHHHHHHHHcCceeeccC-CCCCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 425 ETAVLFEKLRELGVLVGKGG-LHGNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 425 ~~~~~~~~l~~~Gv~v~~~~-~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
...++.++|.+.|+...... ...+.+|++|.-..+++|||+++++|..+.++
T Consensus 824 ~~~dvakRL~d~Gihapt~~fPv~~~LmIepTE~eskeEIDrf~eAL~~I~~e 876 (954)
T PRK12566 824 SEEDVAKRLMDYGFHAPTMSFPVPGTLMVEPTESESKAELDRFVEAMLSIRAE 876 (954)
T ss_pred CHHHHHHHHHHCCcEEeEEeeccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHH
Confidence 24668889999998765321 12578999999999999999999999887654
No 336
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.45 E-value=8.5e-12 Score=125.26 Aligned_cols=306 Identities=21% Similarity=0.203 Sum_probs=180.6
Q ss_pred HHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCC
Q 011777 115 PDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGG 194 (477)
Q Consensus 115 p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~ 194 (477)
.+..+++.+.++....+. ..+...+++++++++++ .+.++.++|||.|+.+|++.. ...++++||+..-+|+..
T Consensus 5 ~e~~~~v~~~l~s~~~~~---~g~~~~~fE~~~a~~~g--~~~~~~~~sgt~Al~~al~~l-~~~~gdeVi~p~~t~~~~ 78 (363)
T PF01041_consen 5 EEEIDAVLEVLRSGWLST---YGPYVEEFEKEFAEYFG--VKYAVAVSSGTSALHLALRAL-GLGPGDEVIVPAYTFPAT 78 (363)
T ss_dssp HHHHHHHHHHHHHTCCSS---SSHHHHHHHHHHHHHHT--SSEEEEESSHHHHHHHHHHHT-TGGTTSEEEEESSS-THH
T ss_pred HHHHHHHHHHHHhCCccC---CCHHHHHHHHHHHHHhC--CCeEEEeCChhHHHHHHHHhc-CCCcCceEecCCCcchHH
Confidence 456677777776643221 15778999999999995 478999999999999999964 345678999988888776
Q ss_pred cccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhH
Q 011777 195 SSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYL 274 (477)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l 274 (477)
.......+..+. .+.+. ...++.| .++++++|+ +++++|++-...|. ... +
T Consensus 79 ~~ai~~~G~~pv-----------~~Di~---~~~~~id----~~~~~~~i~----~~t~ai~~~h~~G~---~~d----~ 129 (363)
T PF01041_consen 79 ASAILWAGAEPV-----------FVDID---PETLNID----PEALEKAIT----PKTKAILVVHLFGN---PAD----M 129 (363)
T ss_dssp HHHHHHTT-EEE-----------EE-BE---TTTSSB-----HHHHHHHHH----TTEEEEEEE-GGGB----------H
T ss_pred HHHHHHhccEEE-----------EEecc---CCcCCcC----HHHHHHHhc----cCccEEEEecCCCC---ccc----H
Confidence 665555543221 11110 0112222 488999987 56788888776653 223 8
Q ss_pred HHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCcceeeec----ccccCccceEEEEeC-HHHHHhhcccc---
Q 011777 275 KLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMA----KGIGNGLPLGAVVTT-PEIANVMAQKI--- 346 (477)
Q Consensus 275 ~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~s----K~lg~G~pig~v~~~-~~~~~~~~~~~--- 346 (477)
.+|.++|++||++||.|-+|+ +|- . +.-...|-.-|+.+|| |.+..|-. |+|+++ +++.+.++...
T Consensus 130 ~~i~~~~~~~~i~lIeD~a~a-~g~---~-~~g~~~G~~gd~~~fSf~~~K~i~~geG-G~v~~~~~~~~~~~~~~~~~g 203 (363)
T PF01041_consen 130 DAIRAIARKHGIPLIEDAAQA-FGA---R-YKGRPVGSFGDIAIFSFHPTKIITTGEG-GAVVTNDPELAERARALRNHG 203 (363)
T ss_dssp HHHHHHHHHTT-EEEEE-TTT-TT----E-ETTEETTSSSSEEEEESSTTSSS-SSS--EEEEESTHHHHHHHHHHTBTT
T ss_pred HHHHHHHHHcCCcEEEccccc-cCc---e-eCCEeccCCCCceEecCCCCCCCcCCCC-eeEEecHHHHHHHhhhhhccC
Confidence 999999999999999999998 431 1 1112234445888776 99873211 888886 55555554321
Q ss_pred --------------cccCCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCcee---eecc--cee
Q 011777 347 --------------QFNTFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGD---VRGR--GLM 407 (477)
Q Consensus 347 --------------~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~---v~g~--g~~ 407 (477)
.+..+..+.+..+.+++-|+.+ +...++-+++.+++.+.|..+ +.+.. ..+. ..+
T Consensus 204 ~~~~~~~~~~~~~~~g~n~rm~~~~AAigl~QL~~L--~~~~~~R~~~a~~y~~~L~~~----~~~~~~~~~~~~~~~~~ 277 (363)
T PF01041_consen 204 RSRDAFRRYRHELPPGYNFRMSELQAAIGLAQLKRL--DEIIARRRENAQRYREALAGI----PGIKPPPIPDGAERSSY 277 (363)
T ss_dssp EETSECSTTEESSSS--B-B-BHHHHHHHHHHHHTH--HHHHHHHHHHHHHHHHHHTTG----TTEEEEGCGTTTEEBCE
T ss_pred cCccccccccccccCCcccccHHHHHHHHHHHHHHh--hhhHHHHHHHHHHHHHHHhcC----CCccccccccccccccc
Confidence 1223445677777777777754 334455555666666665554 32211 1111 122
Q ss_pred EEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCC--------C------------------CCEEEEeCCCCCcHH
Q 011777 408 VGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGL--------H------------------GNVFRIKPPMCFTKD 461 (477)
Q Consensus 408 ~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~--------~------------------~~~iRi~p~~~~t~e 461 (477)
+.+.+.-+... . ...+.+.+.|.++||-+.+... + ...|.+-.....+++
T Consensus 278 ~~f~i~~~~~~--~--~~rd~l~~~L~~~GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~~~~lt~e 353 (363)
T PF01041_consen 278 YRFPIRLPDEA--L--ADRDELVEALRARGIETRPHYPKPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPIHPRLTEE 353 (363)
T ss_dssp SSEEEEETCCG--C--STHHHHHHHHHHTTBEEBCSTSSCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEHSTTSCHH
T ss_pred ccccccccccc--c--chHHHHHHHHHHCCCcccccccCchhhhHHHHhcCccccCCCHHHHHHHhCeEECcCCCCCCHH
Confidence 22222211110 0 1256789999999998765421 0 023445444557899
Q ss_pred HHHHHHHHHH
Q 011777 462 DADFLVDALD 471 (477)
Q Consensus 462 ~i~~~l~~l~ 471 (477)
|+++.++.|+
T Consensus 354 dv~~I~~~ir 363 (363)
T PF01041_consen 354 DVDYIAEAIR 363 (363)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHhhccC
Confidence 9999888774
No 337
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.45 E-value=5e-11 Score=117.28 Aligned_cols=312 Identities=20% Similarity=0.196 Sum_probs=186.0
Q ss_pred HHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCC
Q 011777 115 PDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGG 194 (477)
Q Consensus 115 p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~ 194 (477)
.+..+++.+.++...... -+...++.++++++++. +.++.++|||.|+.+|++..- ..+++.||+..-+|-..
T Consensus 15 ~~e~~~v~~vl~sg~i~~----G~~v~~FE~~~ae~~G~--k~ava~~sgT~AL~laL~al~-ig~GDeVI~ps~TfvAT 87 (374)
T COG0399 15 EEELAAVQEVLKSGWLTG----GPFVRRFEQAFAEYLGV--KYAVAVSSGTAALHLALLALA-IGPGDEVIVPSFTFVAT 87 (374)
T ss_pred hHHHHHHHHHHHcCCeec----ChHHHHHHHHHHHHhCC--CeEEEecChHHHHHHHHHhcC-CCCCCEEEecCCchHHH
Confidence 466777777777654332 36678999999999955 689999999999999998443 56778888877777655
Q ss_pred cccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhH
Q 011777 195 SSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYL 274 (477)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l 274 (477)
....+..+..+.+ +.+. ...++.| .+.+|+.|+ +++++||.-...|. ... +
T Consensus 88 an~i~~~Ga~PVF-----------vDid---~~T~nid----~~~ie~aIt----~~tKAIipVhl~G~---~~d----m 138 (374)
T COG0399 88 ANAVLLVGAKPVF-----------VDID---PDTLNID----PDLIEAAIT----PRTKAIIPVHLAGQ---PCD----M 138 (374)
T ss_pred HHHHHHcCCeEEE-----------EecC---CcccCCC----HHHHHHHcc----cCCeEEEEehhccC---CCC----H
Confidence 5544444433221 1110 1112222 488999987 45888887666553 233 8
Q ss_pred HHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCcceeeec----ccccCccceEEEEeC-HHHHHhhccc-ccc
Q 011777 275 KLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMA----KGIGNGLPLGAVVTT-PEIANVMAQK-IQF 348 (477)
Q Consensus 275 ~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~s----K~lg~G~pig~v~~~-~~~~~~~~~~-~~~ 348 (477)
++|.++|++||++||.|..|+ +|-+ +.-..-|-.-|+.+|| |.++.| --|+++++ +++.+.++.. .|+
T Consensus 139 ~~i~~la~~~~l~vIEDaAqa-~Ga~----y~gk~vGt~Gd~~~fSF~~~K~ittg-EGGav~tnd~ela~k~~~lr~hG 212 (374)
T COG0399 139 DAIMALAKRHGLPVIEDAAQA-HGAT----YKGKKVGSFGDIGAFSFHATKNLTTG-EGGAVVTNDEELAEKARSLRNHG 212 (374)
T ss_pred HHHHHHHHHcCCeEEEEcchh-ccCe----ecCcccccccceEEEEecCCCCcccc-CceEEEeCCHHHHHHHHHHHHhC
Confidence 999999999999999999997 5421 1112334455777776 999853 33888886 5566665432 111
Q ss_pred c---------------CCCCcHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeecc-ceeEEEEE
Q 011777 349 N---------------TFGGNPVCSAGGLAVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGR-GLMVGMEL 412 (477)
Q Consensus 349 ~---------------t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~-g~~~~i~~ 412 (477)
- .+.-+-+.++.+++-|+.+ +++.++-+++.++..+.|+++.. ........+. ..+..+.+
T Consensus 213 ~~~~~~~~y~~~~~G~N~rm~~iqAAigl~QL~~l--~~~~~~R~~~a~~Y~~~l~~~~~-~~~p~~~~~~~~~~~~~~i 289 (374)
T COG0399 213 LSRDAVFKYLHEELGYNYRLTEIQAAIGLAQLERL--DEINERRREIAQIYAEALKGLPG-ITLPPEPDGAVHAWHLYTI 289 (374)
T ss_pred cCCCccccceeeecccccCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhhcCCC-ccccCCCCCceeeeeeeEE
Confidence 1 1122344555555555543 44555555666666666655421 1111111111 11211111
Q ss_pred eeCCCCCCccHHHHHHHHHHHHHcCce----eecc---------C-----C-------CCCEEEEeCCCCCcHHHHHHHH
Q 011777 413 VTDRKEKTPAKAETAVLFEKLRELGVL----VGKG---------G-----L-------HGNVFRIKPPMCFTKDDADFLV 467 (477)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~l~~~Gv~----v~~~---------~-----~-------~~~~iRi~p~~~~t~e~i~~~l 467 (477)
.-+.. ...-+.+.+.|.++||. ..|. + . ....+.+=..-..+++|+++.+
T Consensus 290 ~~~~~-----~~~R~~l~~~L~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V~ 364 (374)
T COG0399 290 LVDEE-----GISRDALMESLKEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRVI 364 (374)
T ss_pred EecCC-----CCCHHHHHHHHHhCCCCceEEeeccccchhhhcccccccCCCchHHHHhhCeEEccCCCCCCHHHHHHHH
Confidence 11110 12246788899999654 3331 0 0 0134555333446899999999
Q ss_pred HHHHHHHhh
Q 011777 468 DALDYSMSK 476 (477)
Q Consensus 468 ~~l~~~l~~ 476 (477)
+.|.+++.+
T Consensus 365 ~~l~~~~~~ 373 (374)
T COG0399 365 EALKEVLGS 373 (374)
T ss_pred HHHHHHhcc
Confidence 999998864
No 338
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.42 E-value=3.3e-11 Score=120.83 Aligned_cols=284 Identities=19% Similarity=0.173 Sum_probs=165.3
Q ss_pred ccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCC
Q 011777 132 TTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPI 211 (477)
Q Consensus 132 ~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~ 211 (477)
++++.+|...+|+++++++.+. +.++.++||+.|+.+++... ..++++||+....|.+.........
T Consensus 58 Y~r~~~P~~~~lE~~la~leg~--~~av~~sSG~aAi~~al~al--l~~GD~Vl~~~~~yg~t~~~~~~~~--------- 124 (384)
T PRK06434 58 YTRWGNPTVQAFEEKYAVLENA--EHALSFSSGMGAITSAILSL--IKKGKRILSISDLYGQTFYFFNKVL--------- 124 (384)
T ss_pred eeCCCChhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHH--hCCCCEEEEecCccchHHHHHHHHH---------
Confidence 4455688899999999999854 56889999999999999754 2356788887666654433221110
Q ss_pred CCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEc
Q 011777 212 PQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIAD 291 (477)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~D 291 (477)
...|+....++. ++ .+.++ +. ++++++|++|.+.++.+.+.+ +++|.++|+++| +++|
T Consensus 125 ~~~Gi~v~fvd~------~~-----~~~~~--l~---~~~tklv~~e~~snpt~~v~D----i~~I~~la~~~~--lvVD 182 (384)
T PRK06434 125 KTLGIHVDYIDT------DR-----LNSLD--FD---PSNYDLIYAESITNPTLKVPD----IKNVSSFCHEND--VIVD 182 (384)
T ss_pred HhcCcEEEEECC------CC-----hhhee--ec---CCCeeEEEEEcCCCCCceeec----HHHHHHHHHHcC--eEEE
Confidence 011222221111 00 01222 22 346889999998888876666 999999999998 4569
Q ss_pred CcccCccCCCCCCccccccCCCcceeeec--ccccC-c-cceEEEEe-CHHHHHhhcccccccCCCCcHHHHHHHHHHHH
Q 011777 292 EVQTGFGRTGSHYWGFETQGVIPDIVTMA--KGIGN-G-LPLGAVVT-TPEIANVMAQKIQFNTFGGNPVCSAGGLAVLR 366 (477)
Q Consensus 292 Ev~~gfgr~G~~~~~~~~~gv~pDivt~s--K~lg~-G-~pig~v~~-~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~ 366 (477)
.++.. ...+ ...+...|++++| |.++| | .-.|++++ ++++.+.+...........+++.++.++.-|+
T Consensus 183 ~t~~s-~~~~------~pl~~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~gL~ 255 (384)
T PRK06434 183 ATFAS-PYNQ------NPLDLGADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVERRKTLGSNPDPIQAYLALRGLK 255 (384)
T ss_pred CCCCC-cccC------CchhcCCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhCCC
Confidence 98631 1122 2234457888765 99986 3 44566766 45566655432211223345666666555554
Q ss_pred hhchhhHHHHHHHHHHHHHHHHHHHHHhCCCcee------------eeccceeEEEEEeeCCCCCCccHHHHHHHHHHHH
Q 011777 367 VIDKERRQAHCADVGSHLLGRLRTLQERHDIIGD------------VRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLR 434 (477)
Q Consensus 367 ~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~------------v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~ 434 (477)
.+ +...++..++...+.+.|. .+|.+.. .+|.|.|+.+++.. .....++.+.|.
T Consensus 256 tL--~~R~~r~~~~a~~~a~~L~----~~p~v~~V~yPgl~~~~~~~~g~g~~~sf~l~~--------~~~~~~f~~~l~ 321 (384)
T PRK06434 256 TL--GLRMEKHNKNGMELARFLR----DSKKISNVYYPDTEIGKKVLRGFGGMLSFELRS--------MEDVHKFIRNLE 321 (384)
T ss_pred cH--HHHHHHHHHHHHHHHHHHH----cCCCccEEECCChHHHHHhcCCCCceEEEEECC--------HHHHHHHHHhCC
Confidence 43 3344555555555555554 3443322 23668888888831 122344555443
Q ss_pred H--cCcee--------ecc---------------CCCCCEEEEeCCCCCcHHHHHHHHHHHHHHHh
Q 011777 435 E--LGVLV--------GKG---------------GLHGNVFRIKPPMCFTKDDADFLVDALDYSMS 475 (477)
Q Consensus 435 ~--~Gv~v--------~~~---------------~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~ 475 (477)
= .++-. .|. |...+.|||+..+ ||++.+++-|++++.
T Consensus 322 l~~~~~slG~~~sl~~~p~~~~h~~~~~e~~~~~gi~~~liRlsvGl----Ed~~dLi~dl~~Al~ 383 (384)
T PRK06434 322 IPMVAASLGGVESLITLPVETSHSSLSPEERERLGISDNLVRFSIGI----EDIDDLIKDIENALS 383 (384)
T ss_pred cceEccCCCCCCeeeECCCccccccCCHHHHHhcCCCcCeEEEEeCc----CCHHHHHHHHHHHhc
Confidence 1 11111 111 1124679997665 466667777777764
No 339
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.42 E-value=6.8e-11 Score=120.75 Aligned_cols=332 Identities=16% Similarity=0.133 Sum_probs=176.7
Q ss_pred EEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhcccc---cc-ccCChHHHHHHHHHHhhCCCCCCEEEEeCChH
Q 011777 90 LFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHA---TT-IYLHHAIADFAEALASKMPGNLKVVYFVNSGT 165 (477)
Q Consensus 90 ~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~---~~-~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGs 165 (477)
++...|..|.+..+.. .-++++++++.+.+...... .. ....+....+++.|+++++. +..++++||+
T Consensus 76 vinatg~v~~tNlg~s------~l~~~vieAv~~~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~ga--e~alvv~sg~ 147 (454)
T TIGR00474 76 VINATGVVLHTNLGRA------PLAEEAIEAVTDAARGYSNLEYDLETGKRGSRYSHVEGLLCELTGA--EDALVVNNNA 147 (454)
T ss_pred eeCCCCcEEeccCCCC------CCCHHHHHHHHHHHhcccchhccccccccchHHHHHHHHHHHHhCC--CcEEEECCHH
Confidence 3455666666654321 25799999999988754210 00 01123457889999999865 4567889999
Q ss_pred HHHHHHHHHHHhccCCceEEEEccCc---cCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHH
Q 011777 166 EANELAMLMARLSTGNLGMIALRNAY---HGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQD 242 (477)
Q Consensus 166 eA~~~Al~~ar~~~~~~~ii~~~~~y---hG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~ 242 (477)
.|+.+++.. ..+++.||+.++.+ .|........ ...|+....++.. .. . + .+++++
T Consensus 148 aAi~l~l~~---l~~GdeVIvs~~e~v~~ggs~~i~~~~----------~~~G~~~~~v~~~--~~-~-~----l~dle~ 206 (454)
T TIGR00474 148 AAVLLALNT---LAKGKEVIVSRGELVEIGGSFRIPDVM----------EQSGAKLVEVGTT--NR-T-H----LKDYED 206 (454)
T ss_pred HHHHHHHHH---hCCcCEEEECCChhhhhcchhhHHHHH----------HHcCCEEEEeCCC--CC-C-C----HHHHHH
Confidence 999888853 23566777766553 2211110000 0113333222110 00 0 1 477888
Q ss_pred HHhccCCCCeeEEEecccCCC--CC--eeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCC-----CCCccccccCCC
Q 011777 243 HIDFGTSGKVAGFIAETIQGV--GG--AVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTG-----SHYWGFETQGVI 313 (477)
Q Consensus 243 ~i~~~~~~~~a~vi~epi~~~--~G--~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G-----~~~~~~~~~gv~ 313 (477)
+|+ +++++|+++...+. .| .+++ +++|.++|++||+++|+|....-++-.+ ..+...+.....
T Consensus 207 aI~----~~T~lv~~~h~sN~~~~G~~~~~d----l~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~G 278 (454)
T TIGR00474 207 AIT----ENTALLLKVHTSNYRIVGFTEEVS----IAELVALGREHGLPVMEDLGSGSLVDLSRYGLPDEPTVQEVIAAG 278 (454)
T ss_pred hcC----cCCEEEEEEccCcccccCCCCCCC----HHHHHHHHHHcCCeEEEECCCcccccchhccCCCCcccccHhHcC
Confidence 775 45777777765443 34 2455 9999999999999999996421111111 011111222345
Q ss_pred cceeeec--ccccCccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhch-h-hH------------HHHH
Q 011777 314 PDIVTMA--KGIGNGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDK-E-RR------------QAHC 377 (477)
Q Consensus 314 pDivt~s--K~lg~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~-~-~~------------~~~~ 377 (477)
.|++++| |.++|. ..|++++++++++.+......-.+...-+..++..+++...-. + .+ .++.
T Consensus 279 aDiv~fSg~K~LgGp-~~G~i~g~~~~i~~l~~~~l~r~lr~~k~~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~ 357 (454)
T TIGR00474 279 VDLVTFSGDKLLGGP-QAGIIVGKKELIERLKKNPLTRALRVDKLTLAALEATLRLYLDPEKALEKIPTLRMLTQSPEEL 357 (454)
T ss_pred CCEEEecCccccCCC-eEEEEEECHHHHHhhhhchhHHHHhhChHHHHHHHHHHHHHhCchhhhhhchHHHHhccCHHHH
Confidence 7999998 999764 3689999999887665321111111122223333344432211 1 11 2244
Q ss_pred HHHHHHHHHHHHHHHH-hC--CCceee--ecccee-------EEEEEeeCCCCCCccHHHHHHHHHHHHHcC--ceeecc
Q 011777 378 ADVGSHLLGRLRTLQE-RH--DIIGDV--RGRGLM-------VGMELVTDRKEKTPAKAETAVLFEKLRELG--VLVGKG 443 (477)
Q Consensus 378 ~~~~~~l~~~L~~l~~-~~--~~~~~v--~g~g~~-------~~i~~~~~~~~~~~~~~~~~~~~~~l~~~G--v~v~~~ 443 (477)
.++...+.+.|.+... .. .++.+. -|-|.+ +.+.+.. .......+.+.|++.. |+.+
T Consensus 358 ~~~A~~la~~L~~~~~~~~~~~~~~~~~~~ggg~~p~~~l~~~~v~~~~-------~~~~~~~l~~~lr~~~~~ii~r-- 428 (454)
T TIGR00474 358 RARAERLAKRLKAALGPGFELEIVPGLSQVGGGSLPDERLPSYAVTLTP-------DGLSAEKLEARLRELPPPIIGR-- 428 (454)
T ss_pred HHHHHHHHHHHHhhccCCceEEEEEcCCcccCCCCcCCCCCeEEEEEec-------CCCCHHHHHHHHhcCCCCEEEE--
Confidence 5556666666655321 00 011110 112222 2233321 1122466777777654 4444
Q ss_pred CCCCCEEEEeCCCCCcHHHHHHHHHHH
Q 011777 444 GLHGNVFRIKPPMCFTKDDADFLVDAL 470 (477)
Q Consensus 444 ~~~~~~iRi~p~~~~t~e~i~~~l~~l 470 (477)
...+.+.+-+ -++.++|++.++++|
T Consensus 429 -~~~~~~~ld~-r~~~~~~~~~~~~~~ 453 (454)
T TIGR00474 429 -IEDDRFLLDL-RTLLEDEEELLIEAL 453 (454)
T ss_pred -EECCEEEEEe-CcCCHHHHHHHHHHh
Confidence 2345666664 456788888888765
No 340
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.41 E-value=5.3e-11 Score=121.41 Aligned_cols=165 Identities=18% Similarity=0.153 Sum_probs=107.5
Q ss_pred ccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCC
Q 011777 132 TTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPI 211 (477)
Q Consensus 132 ~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~ 211 (477)
+.+..++....++++++++.+. +..++++||+.|+.+++... ..++++||+....|++.........
T Consensus 63 Y~r~~~pt~~~le~~la~l~g~--~~~v~fsSG~~Ai~~al~~l--l~~Gd~VI~~~~~y~~t~~~~~~~l--------- 129 (437)
T PRK05613 63 YSRLTNPTVEALENRIASLEGG--VHAVAFASGQAAETAAILNL--AGAGDHIVTSPRLYGGTETLFLVTL--------- 129 (437)
T ss_pred eeCccChHHHHHHHHHHHHhCC--CeEEEeCCHHHHHHHHHHHh--cCCCCEEEECCCccHHHHHHHHHHH---------
Confidence 3445678899999999999865 57788899999999888644 2356778887777766522110100
Q ss_pred CCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEc
Q 011777 212 PQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIAD 291 (477)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~D 291 (477)
...|+....++++ . | .++++++++ +++++|++|...++.|.+.+ +++|.++|+++|+++|+|
T Consensus 130 ~~~Gi~v~~vd~~----~--d----~e~l~~~l~----~~tk~V~~e~~~Np~~~v~d----i~~I~~la~~~gi~livD 191 (437)
T PRK05613 130 NRLGIEVTFVENP----D--D----PESWQAAVQ----PNTKAFFGETFANPQADVLD----IPAVAEVAHRNQVPLIVD 191 (437)
T ss_pred HhcCeEEEEECCC----C--C----HHHHHHhCC----ccCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCeEEEE
Confidence 0113333222211 0 1 477888776 45778888887777777777 999999999999999999
Q ss_pred CcccCccCCCCCCccccccCCCcceeee--cccccC-ccceEEEEe
Q 011777 292 EVQTGFGRTGSHYWGFETQGVIPDIVTM--AKGIGN-GLPLGAVVT 334 (477)
Q Consensus 292 Ev~~gfgr~G~~~~~~~~~gv~pDivt~--sK~lg~-G~pig~v~~ 334 (477)
.+++. +. ......+| .|++++ .|.++| |--+|.+++
T Consensus 192 ~t~a~-g~----~~~p~~~G--aDivv~S~~K~l~G~gd~~gG~vv 230 (437)
T PRK05613 192 NTIAT-AA----LVRPLELG--ADVVVASLTKFYTGNGSGLGGVLI 230 (437)
T ss_pred CCCcc-cc----ccChHHhC--CCEEEeeccceecCCCcceeEEEE
Confidence 99852 21 11111234 477765 599886 555554444
No 341
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.41 E-value=2.4e-12 Score=125.47 Aligned_cols=227 Identities=11% Similarity=0.055 Sum_probs=127.6
Q ss_pred CChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCC
Q 011777 136 LHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGE 215 (477)
Q Consensus 136 ~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~ 215 (477)
+.....++.+++++.++.+ +.+++++|+++|+..++.... .++++|++.+++|.....+. ...+
T Consensus 57 ~~g~i~~~~~~~A~~~ga~-~~~~~~~Gst~a~~~~l~al~--~~gd~Vlv~~~~h~s~~~~~-~~~g------------ 120 (294)
T cd00615 57 PTGPIKEAQELAARAFGAK-HTFFLVNGTSSSNKAVILAVC--GPGDKILIDRNCHKSVINGL-VLSG------------ 120 (294)
T ss_pred CChHHHHHHHHHHHHhCCC-CEEEEcCcHHHHHHHHHHHcC--CCCCEEEEeCCchHHHHHHH-HHCC------------
Confidence 4556788888899888653 344459999999999887553 36678888877765543322 2221
Q ss_pred eeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeE-EEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcc
Q 011777 216 IHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAG-FIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQ 294 (477)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~-vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~ 294 (477)
...+..+......++.......++++++++.. .++++ +++.| +..|.+.+ +++|.++|++||+++|+||+|
T Consensus 121 ~~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~--~~~k~v~l~~p--~~~G~~~d----l~~I~~~~~~~g~~livDeA~ 192 (294)
T cd00615 121 AVPVYLKPERNPYYGIAGGIPPETFKKALIEH--PDAKAAVITNP--TYYGICYN----LRKIVEEAHHRGLPVLVDEAH 192 (294)
T ss_pred CEEEEecCccCcccCcCCCCCHHHHHHHHHhC--CCceEEEEECC--CCCCEecC----HHHHHHHHHhcCCeEEEECcc
Confidence 11111111100000000000157888887631 24554 44445 34676666 899999999999999999998
Q ss_pred cCc-cCCCCCCccccccCCCccee--eecccccCccceE-EEEeCHHHH--Hhhcc-cccccCCCCcHHHHHHHHHHHHh
Q 011777 295 TGF-GRTGSHYWGFETQGVIPDIV--TMAKGIGNGLPLG-AVVTTPEIA--NVMAQ-KIQFNTFGGNPVCSAGGLAVLRV 367 (477)
Q Consensus 295 ~gf-gr~G~~~~~~~~~gv~pDiv--t~sK~lg~G~pig-~v~~~~~~~--~~~~~-~~~~~t~~~~~~~~aaa~a~l~~ 367 (477)
... ...+ . +.........|++ +++|.++ |++.| ++..+.+.. +.+.. .....|.+.+.+.+++..++++.
T Consensus 193 ~~~~~~~~-~-~~~~~~~~~~div~~S~hK~l~-g~~~~~~l~~~~~~~~~~~~~~~~~~~~ttsps~~~~asl~~a~~~ 269 (294)
T cd00615 193 GAHFRFHP-I-LPSSAAMAGADIVVQSTHKTLP-ALTQGSMIHVKGDLVNPDRVNEALNLHQSTSPSYLILASLDVARAM 269 (294)
T ss_pred hhhhccCc-c-cCcchhhcCCcEEEEchhcccc-hHhHHHHHHhCCCcCCHHHHHHHHHHHCCCCcHHHHHHHHHHHHHH
Confidence 742 2222 1 1111122245666 5679874 45443 333433311 11211 11223445666777777777776
Q ss_pred hch--hhHHHHHHHHHHHHHHHHH
Q 011777 368 IDK--ERRQAHCADVGSHLLGRLR 389 (477)
Q Consensus 368 l~~--~~~~~~~~~~~~~l~~~L~ 389 (477)
+.. +++.++..++.++++++|+
T Consensus 270 ~~~~g~~~~~~~~~~~~~~r~~l~ 293 (294)
T cd00615 270 MALEGKELVEELIELALYARQEIN 293 (294)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHh
Confidence 643 3466667777777777654
No 342
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.39 E-value=2.5e-11 Score=115.39 Aligned_cols=189 Identities=22% Similarity=0.197 Sum_probs=127.3
Q ss_pred CCCCCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEcc
Q 011777 110 CGHCHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRN 189 (477)
Q Consensus 110 lGh~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~ 189 (477)
+.+.+++=.+++- +++...+.+++..+|....|.++++.+-++ . -.+.+.||..|+..|+..... .++.||+-..
T Consensus 35 y~F~d~~haa~lF-~l~~~G~iYsRi~NPT~~vlE~RiAaLEGG-~-aa~a~aSG~AA~~~ai~~la~--aGD~iVss~~ 109 (426)
T COG2873 35 YVFDDTDHAAALF-GLKEPGNIYTRIMNPTTDVLEERIAALEGG-V-AALAVASGQAAITYAILNLAG--AGDNIVSSSK 109 (426)
T ss_pred eecCCHHHHHHHh-CCCcCCceeeeccCchHHHHHHHHHHhhcc-h-hhhhhccchHHHHHHHHHhcc--CCCeeEeecc
Confidence 3455544333322 234444555667789999999999988654 2 356789999999998875432 5678888766
Q ss_pred CccCCcccccccccCCCCCCCCCCCCe--eeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCee
Q 011777 190 AYHGGSSGTIGLTALNTWKYPIPQGEI--HHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAV 267 (477)
Q Consensus 190 ~yhG~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~ 267 (477)
-|-|. ...++.+- +..|+ .++...+ .+.+++.|+ +++++|.+|.+-|+.+.+
T Consensus 110 LYGGT-~~lf~~tl--------~~~Gi~v~fvd~~d-------------~~~~~~aI~----~nTkavf~EtigNP~~~v 163 (426)
T COG2873 110 LYGGT-YNLFSHTL--------KRLGIEVRFVDPDD-------------PENFEAAID----ENTKAVFAETIGNPGLDV 163 (426)
T ss_pred ccCch-HHHHHHHH--------HhcCcEEEEeCCCC-------------HHHHHHHhC----cccceEEEEeccCCCccc
Confidence 66443 33222221 11233 2332111 488898887 689999999999999888
Q ss_pred eCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCccee--eecccccC-ccceEEEEeCHHHHH
Q 011777 268 ELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIV--TMAKGIGN-GLPLGAVVTTPEIAN 340 (477)
Q Consensus 268 ~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDiv--t~sK~lg~-G~pig~v~~~~~~~~ 340 (477)
+. +++|.++|++||+++|+|...+. ++-+.-.+.-.||| +++|-+|| |--||.+++...-.+
T Consensus 164 ~D----ie~ia~iAh~~gvpliVDNT~at-------pyl~rP~~hGADIVvHS~TK~igGhGt~iGG~iVD~G~FD 228 (426)
T COG2873 164 LD----IEAIAEIAHRHGVPLIVDNTFAT-------PYLCRPIEHGADIVVHSATKYIGGHGTAIGGVIVDGGKFD 228 (426)
T ss_pred cC----HHHHHHHHHHcCCcEEEecCCCc-------ceecchhhcCCCEEEEeecccccCCccccceEEEeCCccc
Confidence 77 99999999999999999987652 23333344456777 57899998 888887776544333
No 343
>PLN02263 serine decarboxylase
Probab=99.39 E-value=9.3e-10 Score=111.55 Aligned_cols=288 Identities=19% Similarity=0.134 Sum_probs=171.2
Q ss_pred hHHHHHHHHHHhhCCCCCC--EEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCC
Q 011777 138 HAIADFAEALASKMPGNLK--VVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGE 215 (477)
Q Consensus 138 ~~~~~l~~~La~~~~~~~~--~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~ 215 (477)
+...++.++++++++.+.+ .-++|+||||||..|+..||.+.++ .+++..-.-|-...-+....+. .
T Consensus 133 ~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~-~vvy~S~~aH~Sv~KAa~llgi----------~ 201 (470)
T PLN02263 133 QFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPD-GILYASRESHYSVFKAARMYRM----------E 201 (470)
T ss_pred HHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCC-cEEEEcCCccHHHHHHHHhcCC----------c
Confidence 4456788888888865332 4689999999999999999986543 3555555555443333333221 2
Q ss_pred eeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCc-----EEEE
Q 011777 216 IHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGG-----VCIA 290 (477)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gi-----llI~ 290 (477)
+..++.. .....+ .++|++.|.... ..+.+|+..--.-+.|.+-| +++|.++|++||+ +|++
T Consensus 202 ~~~Vp~d--~~g~mD------~~aL~~aI~~d~-~~P~iVvataGTT~~GAiDp----i~eIa~i~~~~g~~~~~iwlHV 268 (470)
T PLN02263 202 CVKVDTL--VSGEID------CADFKAKLLANK-DKPAIINVNIGTTVKGAVDD----LDLVIKTLEECGFSQDRFYIHC 268 (470)
T ss_pred ceEeccC--CCCcCc------HHHHHHHHHhCC-CCcEEEEEEecCCCCcCCCC----HHHHHHHHHHcCCccCCeeEEE
Confidence 2233221 112222 588888886322 23455555544444576777 9999999999997 9999
Q ss_pred cCcccCccCC---CCCCccccccCCCcceeeec--ccccCccceEEEEeCHHHHHhhcccc-----cccCCCC--cHHHH
Q 011777 291 DEVQTGFGRT---GSHYWGFETQGVIPDIVTMA--KGIGNGLPLGAVVTTPEIANVMAQKI-----QFNTFGG--NPVCS 358 (477)
Q Consensus 291 DEv~~gfgr~---G~~~~~~~~~gv~pDivt~s--K~lg~G~pig~v~~~~~~~~~~~~~~-----~~~t~~~--~~~~~ 358 (477)
|.++.|+-.. ....|.+ ....|-++++ |.++..++.|.++.+++..+.+.... ...|..+ +....
T Consensus 269 DAA~GG~~lPf~~~~~~~df---~~~vDSIsvD~HK~l~~P~~cgvll~R~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~a 345 (470)
T PLN02263 269 DGALFGLMMPFVKRAPKVTF---KKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAP 345 (470)
T ss_pred eccchhhHhhhcccccccCC---CcCccEEEECCccccCCCcCEEEEEEehhhHhhhccChHhhCCCCCCcCCCCCcHHH
Confidence 9999886320 0011111 1225666655 98888899999999977655443210 1112222 22234
Q ss_pred HHHHHHHHhhchhhH---HHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHH
Q 011777 359 AGGLAVLRVIDKERR---QAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRE 435 (477)
Q Consensus 359 aaa~a~l~~l~~~~~---~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~ 435 (477)
+....+|+.+..+++ .++..++.+++.++|++. +...-.....+.+.+. . |.. .+..
T Consensus 346 l~lW~~L~~~G~~G~~~~i~~~~~~A~~l~~~l~~~----g~~~~~~p~s~~V~f~--~------p~~--------~~~~ 405 (470)
T PLN02263 346 IFLWYTLNRKGYRGFQKEVQKCLRNAHYLKDRLREA----GISAMLNELSSTVVFE--R------PKD--------EEFV 405 (470)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC----CCeEEeCCCceEEEEe--c------Cch--------HHhh
Confidence 556667776655554 444455666777777654 3322233344443332 1 111 1134
Q ss_pred cCceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHHHh
Q 011777 436 LGVLVGKGGLHGNVFRIKPPMCFTKDDADFLVDALDYSMS 475 (477)
Q Consensus 436 ~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~ 475 (477)
+|..+.+. ++.+++...-.++++.+|++++-|.+..+
T Consensus 406 ~gW~L~~~---~~~~Hivvmphv~~~~id~fi~DL~~~~~ 442 (470)
T PLN02263 406 RRWQLACQ---GNIAHVVVMPSVTIEKLDYFLKELVEKRS 442 (470)
T ss_pred cceEEccC---CCcEEEEEcCCCCHHHHHHHHHHHHHHHh
Confidence 67666543 34577766655788999999999987654
No 344
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.38 E-value=9e-10 Score=100.36 Aligned_cols=327 Identities=17% Similarity=0.205 Sum_probs=194.0
Q ss_pred CCHHHHHHHHHHHhhccccccc-------cCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEE
Q 011777 113 CHPDVLNAIFEQSKLLQHATTI-------YLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMI 185 (477)
Q Consensus 113 ~~p~v~~Av~~~l~~~~~~~~~-------~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii 185 (477)
-.++.++|+.+.-+-+...... ...|++.++-+.|++++ +.|.+.+|++.-||-.++|.... +++..+
T Consensus 29 Lt~eArkal~E~gDGYSvCD~C~~Grldei~kPpI~~F~~dlaeFl--g~D~~R~t~GARe~KfavMhal~---~~gd~v 103 (382)
T COG1103 29 LTEEARKALLEWGDGYSVCDFCLEGRLDEITKPPIKDFLEDLAEFL--GMDEVRVTAGAREAKFAVMHALC---KEGDWV 103 (382)
T ss_pred CCHHHHHHHHHhcCCcchhhhhccCccccccCCcHHHHHHHHHHHh--CCceeeecccchhhHHHHHHHhc---cCCCEE
Confidence 3677777777654432211111 23577889999999999 45789999999999988877432 566777
Q ss_pred EEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCC
Q 011777 186 ALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGG 265 (477)
Q Consensus 186 ~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G 265 (477)
+.++-.|=.+..+.-..+ .....+|+.-...+..+.+.|.+-+++..+. ..+.++..++..+.++.|
T Consensus 104 V~D~~aHYttyvAAErag------------l~v~eVp~tg~Pey~i~~e~y~~viee~~~~-~g~~~~lallTh~Dg~YG 170 (382)
T COG1103 104 VVDSLAHYTTYVAAERAG------------LNVAEVPNTGYPEYKITPEGYAEVIEEVKDE-GGDPPALALLTHVDGEYG 170 (382)
T ss_pred EEcCcchHHHHHHHHhcC------------CeEEecCCCCCCceEecHHHHHHHHHHHHhc-cCCCceEEEEeccCCCcC
Confidence 778877755544333222 2222222211112333455566667776653 234578888888889999
Q ss_pred eeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCcceeeec--ccccCccceEEEEeCHHHHHhhc
Q 011777 266 AVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMA--KGIGNGLPLGAVVTTPEIANVMA 343 (477)
Q Consensus 266 ~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~s--K~lg~G~pig~v~~~~~~~~~~~ 343 (477)
.+.. -+++.++|+++|++++..-+|+ .||.. .....+.+|.++-| |++++.-|+|.+..++|+.+..-
T Consensus 171 Nl~D----akkva~ic~e~gvPlllN~AYt-~Grmp-----vs~ke~g~DFiVgSGHKsmAAs~PiGvl~~~eE~ae~V~ 240 (382)
T COG1103 171 NLAD----AKKVAKICREYGVPLLLNCAYT-VGRMP-----VSGKEIGADFIVGSGHKSMAASAPIGVLAMSEEWAEIVL 240 (382)
T ss_pred Cchh----hHHHHHHHHHcCCceEeeccee-ecccc-----ccccccCCCEEEecCccchhccCCeeEEeehhHHHHHHH
Confidence 7766 7899999999999999999998 66543 34456778988766 99998679999999999887654
Q ss_pred ccc-----------cccCCCCcHHH-HHHHH-HHHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccc-eeEE
Q 011777 344 QKI-----------QFNTFGGNPVC-SAGGL-AVLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRG-LMVG 409 (477)
Q Consensus 344 ~~~-----------~~~t~~~~~~~-~aaa~-a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g-~~~~ 409 (477)
..+ .+-|-.+.|+. +.|.. .+.+.+ .+|-+. -+..+++.+.|.++.. ....+ .++.. -+..
T Consensus 241 r~Sg~~~~~KEvellGCT~rGapivTlmASfP~V~eRV--krWdeE-v~kaR~fv~elEkigg-~~qlG-~rPk~HdLm~ 315 (382)
T COG1103 241 RRSGRAFPKKEVELLGCTVRGAPIVTLMASFPHVVERV--KRWDEE-VEKARWFVAELEKIGG-VKQLG-ERPKNHDLMK 315 (382)
T ss_pred hhcccccccceeeeecccccCchHHHHHhcCHHHHHHH--HHHHHH-HHHHHHHHHHHHHhhh-HHHhC-CCCcccceee
Confidence 322 12233333332 22222 222222 122222 2334566666665530 00011 11111 1112
Q ss_pred EEEee--CCCCCCccHHHHHHHHHHHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 410 MELVT--DRKEKTPAKAETAVLFEKLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 410 i~~~~--~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
++... .-..+ .....-.++++|+++||.-...|. ..+|.++. +..+.|+++..++++++++++
T Consensus 316 Fetp~f~eIakk--~~r~gyFlY~ELK~RgI~GI~~G~-Tk~~K~sv-yGl~~Eqve~V~~afkeI~ek 380 (382)
T COG1103 316 FETPVFHEIAKK--HKRKGYFLYEELKKRGIHGIQPGQ-TKYFKLSV-YGLSWEQVEYVVDAFKEIAEK 380 (382)
T ss_pred ecCchHHHHHHh--CcCCceeeHHHHHhcCccccccCc-eeEEEEEe-ecCCHHHHHHHHHHHHHHHHh
Confidence 22100 00000 000112467899999987543222 34677763 678999999999999998764
No 345
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.38 E-value=2.7e-10 Score=118.34 Aligned_cols=309 Identities=15% Similarity=0.110 Sum_probs=165.2
Q ss_pred ChHHHHHHHHHHhhCCCC-------------CCEEEEeCChHHHHHHHHHHHHhccC-----------------------
Q 011777 137 HHAIADFAEALASKMPGN-------------LKVVYFVNSGTEANELAMLMARLSTG----------------------- 180 (477)
Q Consensus 137 ~~~~~~l~~~La~~~~~~-------------~~~v~~~~sGseA~~~Al~~ar~~~~----------------------- 180 (477)
.+....+.++|++++... ...-.||+|||+||..||..||...-
T Consensus 128 t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~ 207 (522)
T TIGR03799 128 TPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYGY 207 (522)
T ss_pred HHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhccC
Confidence 344556667777765210 12357899999999999999987421
Q ss_pred CceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhcc--CCCCeeEEEec
Q 011777 181 NLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFG--TSGKVAGFIAE 258 (477)
Q Consensus 181 ~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~--~~~~~a~vi~e 258 (477)
++.+|+....-|-...-+....+ .....+..++... .+..+ .++|++.|+.. ....+.+|+..
T Consensus 208 ~~~~v~~S~~~H~S~~kaa~~lg-------lg~~~v~~vp~d~--~g~~d------~~~L~~~i~~~~~~g~~~~~vvat 272 (522)
T TIGR03799 208 DGLAILVSERGHYSLGKAADVLG-------IGRDNLIAIKTDA--NNRID------VDALRDKCAELAEQNIKPLAIVGV 272 (522)
T ss_pred CceEEEECCCchHHHHHHHHHcC-------CCcccEEEEEeCC--CCcCC------HHHHHHHHHHHHHCCCCcEEEEEE
Confidence 11233333344433221111111 1111233343321 11222 57788777522 12234445444
Q ss_pred ccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCC-Ccceeeec--ccccCccceEEEEeC
Q 011777 259 TIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGV-IPDIVTMA--KGIGNGLPLGAVVTT 335 (477)
Q Consensus 259 pi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv-~pDivt~s--K~lg~G~pig~v~~~ 335 (477)
....+.|.+.| +++|.++|++||+++++|.+|.|....- .-+.....++ ..|.++++ |.+.+.+..|+++.+
T Consensus 273 aGtt~tGaiDp----l~eIa~i~~~~g~~lHVDaA~gg~~~~~-~~~r~~l~gle~aDSit~d~HK~l~~P~g~G~llvr 347 (522)
T TIGR03799 273 AGTTETGNIDP----LDEMADIAQELGCHFHVDAAWGGATLLS-NTYRHLLKGIERADSVTIDAHKQLYVPMGAGMVLFK 347 (522)
T ss_pred ecCcCCCCcCC----HHHHHHHHHHcCCeEEEEchhhhHHHhC-HHHHHHhcCchhCCEEEEChhhcCCcCcccEEEEEe
Confidence 44556788888 9999999999999999999998642111 0000012455 57988887 988877889999886
Q ss_pred -HHHHHhhccc----cc-c------cCCCCc-HHHHHHHHHHHHhhchh---hHHHHHHHHHHHHHHHHHHHHHhCCCce
Q 011777 336 -PEIANVMAQK----IQ-F------NTFGGN-PVCSAGGLAVLRVIDKE---RRQAHCADVGSHLLGRLRTLQERHDIIG 399 (477)
Q Consensus 336 -~~~~~~~~~~----~~-~------~t~~~~-~~~~aaa~a~l~~l~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~ 399 (477)
++..+.+... .. + .++.+. +.......++|+.+..+ .+.++..++.+++.+.|++. +.+.
T Consensus 348 ~~~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~al~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~----~~~e 423 (522)
T TIGR03799 348 DPALMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMAMLVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQ----PDFE 423 (522)
T ss_pred CHHHHHHhccCcchhcCCCCCccccceeecCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhC----CCeE
Confidence 4555544321 00 0 122221 22222455667766543 45566666666666666543 3221
Q ss_pred ee-eccceeEEEEEeeCCCCC----------Cc----cHHHHHHHHHHHHHcCceeeccC-----CC----CCEEEEeC-
Q 011777 400 DV-RGRGLMVGMELVTDRKEK----------TP----AKAETAVLFEKLRELGVLVGKGG-----LH----GNVFRIKP- 454 (477)
Q Consensus 400 ~v-~g~g~~~~i~~~~~~~~~----------~~----~~~~~~~~~~~l~~~Gv~v~~~~-----~~----~~~iRi~p- 454 (477)
-+ .+.-.++.+.+....... .. .......+.+.+.+.|....... .+ ..+||++.
T Consensus 424 l~~~p~l~iv~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~~~G~~~vs~t~l~~~~~~g~~~~~lR~~~~ 503 (522)
T TIGR03799 424 LVTEPELCLLTYRYVPEEVQQALAKADEEQREKINELLDRLTKFIQKRQREAGKSFVSRTRLTPAQYDHQPTVVFRVVLA 503 (522)
T ss_pred EecCCCccEEEEEEeChhhcccccccchhhhhhHHHHHHHHHHHHHHHHHhcCCEEEEEEEecccccCCCCcEEEEEEec
Confidence 11 122234444443211000 00 01123467777888886554311 11 14689865
Q ss_pred CCCCcHHHHHHHHHH
Q 011777 455 PMCFTKDDADFLVDA 469 (477)
Q Consensus 455 ~~~~t~e~i~~~l~~ 469 (477)
+..+|+++|+.+++.
T Consensus 504 np~tt~~~i~~~l~~ 518 (522)
T TIGR03799 504 NPLTTHEILQDILDE 518 (522)
T ss_pred CCCCCHHHHHHHHHH
Confidence 444688999887764
No 346
>PLN02452 phosphoserine transaminase
Probab=99.32 E-value=7.6e-10 Score=110.31 Aligned_cols=326 Identities=12% Similarity=0.001 Sum_probs=190.9
Q ss_pred EEeecCCcccccCCCCCHHHHHHHHHHHhh----------ccccccccCChHHHHHHHHHHhhCC--CCCCEEEEeCChH
Q 011777 98 YLDAFAGIVTVSCGHCHPDVLNAIFEQSKL----------LQHATTIYLHHAIADFAEALASKMP--GNLKVVYFVNSGT 165 (477)
Q Consensus 98 ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~----------~~~~~~~~~~~~~~~l~~~La~~~~--~~~~~v~~~~sGs 165 (477)
.+.|..|-.. -+++|.+++.+.+-+ ..|....+ .....+..+.|.+++. .+.+.+++..|||
T Consensus 8 ~~~f~pGP~~-----lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f-~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt 81 (365)
T PLN02452 8 VFNFSAGPAT-----LPANVLAKAQAELYNWEGSGMSVMEMSHRGKEF-LSIIQKAEADLRELLDIPDNYEVLFLQGGAS 81 (365)
T ss_pred eEeeeCCCCC-----CCHHHHHHHHHHHhcccccCccccccCCCchHH-HHHHHHHHHHHHHHhCCCCCceEEEEeCccH
Confidence 4456665542 378999999887643 22322211 3556777888888875 3455677779999
Q ss_pred HHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHh
Q 011777 166 EANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHID 245 (477)
Q Consensus 166 eA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~ 245 (477)
.++++++.-... +++++++...++.|....-.+..-... .+........+..... ++++ +
T Consensus 82 ~~~ea~~~nl~~--~~~~~l~~~~G~fg~r~~~~a~~~g~~--------~~~~~~~~~~~~~~~~------~~~~----~ 141 (365)
T PLN02452 82 TQFAAIPLNLCK--PGDKADFVVTGSWSKKAAKEAKKYCKT--------NVIASGKDEKYTKIPS------VSEW----E 141 (365)
T ss_pred HHHHHHHHhcCC--CCCeEEEEECCHHHHHHHHHHHHhCCC--------cEEEecCCCCCCCCCC------hHHc----C
Confidence 999998875432 446677777777665443332211000 0000000111111111 1222 2
Q ss_pred ccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCcceeeecccccC
Q 011777 246 FGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMAKGIGN 325 (477)
Q Consensus 246 ~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~sK~lg~ 325 (477)
. ..++..|.+..+...+|+...+ ++++. ++++|+|-+++ +| + ....++.+++ |..+--|.+|
T Consensus 142 ~--~~~~~~v~~~hnETstGv~~~~---~~~i~------~~~lvVDa~Ss-~g--~-~pidv~~~~v--~~~saqK~lG- 203 (365)
T PLN02452 142 L--TPDAKFVHICANETIHGVEFKD---YPDVG------NVPLVADMSSN-FL--S-KPVDVSKYGV--IYAGAQKNVG- 203 (365)
T ss_pred C--CCCCcEEEECCCCCCCcEecCc---ccccC------CCeEEEECCcc-cc--C-cccCHHHcCE--EEEecccccC-
Confidence 1 2356677776666667763222 34332 38999999998 32 2 3444555565 6666679995
Q ss_pred ccceEEEEeCHHHHHhhccc-----------ccccCCC-CcHHHHHHHHHHHHhhchh----hHHHHHHHHHHHHHHHHH
Q 011777 326 GLPLGAVVTTPEIANVMAQK-----------IQFNTFG-GNPVCSAGGLAVLRVIDKE----RRQAHCADVGSHLLGRLR 389 (477)
Q Consensus 326 G~pig~v~~~~~~~~~~~~~-----------~~~~t~~-~~~~~~aaa~a~l~~l~~~----~~~~~~~~~~~~l~~~L~ 389 (477)
...+|.+++++++.+.+... ....+++ .|..++.+..++|+.+.++ ...++.+++.+++++.|+
T Consensus 204 P~Gl~~v~vr~~~l~~~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~ 283 (365)
T PLN02452 204 PSGVTIVIIRKDLIGNARPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAID 283 (365)
T ss_pred CCCeEEEEEcHHHHhhcccCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHH
Confidence 33489999999988765432 1223343 4455666666888888654 355666666777777776
Q ss_pred HHHHhCCCceeeeccce-eEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCC-CCCEEEEeCCCCCcHHHHHHHH
Q 011777 390 TLQERHDIIGDVRGRGL-MVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGL-HGNVFRIKPPMCFTKDDADFLV 467 (477)
Q Consensus 390 ~l~~~~~~~~~v~g~g~-~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~-~~~~iRi~p~~~~t~e~i~~~l 467 (477)
+...-+....+..-+.. .+.+.+. ......++.+.+.++|++..+|-. .++ +|++.=-.++.++++.++
T Consensus 284 ~~~G~y~~~~~~~~rs~~~vsF~~~--------~~~~~~~f~~~~~~~g~~~~~G~r~~gg-~R~s~yna~~~~~v~~L~ 354 (365)
T PLN02452 284 ESNGFYVCPVEKSVRSLMNVPFTLG--------GSELEAEFVKEAAKAGMVQLKGHRSVGG-MRASIYNAMPLAGVEKLV 354 (365)
T ss_pred hCCCcccCCCChHHhCCeEEEEEcC--------CchhHHHHHHHHHHCCCcccCCccccCc-eEEECcCCCCHHHHHHHH
Confidence 53100111111111222 3333331 122567899999999999988732 234 999888889999999999
Q ss_pred HHHHHHHhh
Q 011777 468 DALDYSMSK 476 (477)
Q Consensus 468 ~~l~~~l~~ 476 (477)
+.+++.-++
T Consensus 355 ~~m~~f~~~ 363 (365)
T PLN02452 355 AFMKDFQAK 363 (365)
T ss_pred HHHHHHHHh
Confidence 999987653
No 347
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.31 E-value=1.2e-09 Score=108.94 Aligned_cols=317 Identities=15% Similarity=0.112 Sum_probs=175.4
Q ss_pred CHH-HHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCC--CCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccC
Q 011777 114 HPD-VLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPG--NLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNA 190 (477)
Q Consensus 114 ~p~-v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~--~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~ 190 (477)
+|. .++++.+++-...|.+.. ..+...+..+.|.+++.. +.+.++++.|||.++|+++.-... .++.++++. +
T Consensus 15 ~~~~~~~~~~~~~~~~~HRs~~-F~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~-~~g~~vLv~--g 90 (374)
T TIGR01365 15 RPGWSIEELKNAPLGRSHRSKL-GKEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLG-CRGVDVLAW--E 90 (374)
T ss_pred CchhhHHHHhhhhcccCcCCHH-HHHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCC-CCCCeEEEE--C
Confidence 566 666666655444444332 235566777888888763 345678899999999999985432 134566653 3
Q ss_pred ccCCccc-cccc-ccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeee
Q 011777 191 YHGGSSG-TIGL-TALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVE 268 (477)
Q Consensus 191 yhG~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~ 268 (477)
+.|.... -+.. .+.+ .+..+. .++...++ +++++. ...+..+..|+ .+|+..
T Consensus 91 ~FG~r~~~eia~~~g~~---------~v~~l~--~~~g~~~~------~~~ve~------~~~v~~vhnET---STGv~n 144 (374)
T TIGR01365 91 SFGKGWVTDVTKQLKLP---------DVRVLE--AEYGKLPD------LKKVDF------KNDVVFTWNGT---TSGVRV 144 (374)
T ss_pred HHHHHHHHHHHHhcCCC---------CcEEEc--CCCCCCCC------HHHcCC------CCCEEEecCCC---chheec
Confidence 5454322 1111 0100 011111 12222222 344441 12344444443 456555
Q ss_pred CCchhHHHHHHHHHH-hCcEEEEcCcccCccCCCCCCccccccCCCcceeeec--ccccCccceEEEEeCHHHHHhhccc
Q 011777 269 LAPGYLKLVYDIVRK-AGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMA--KGIGNGLPLGAVVTTPEIANVMAQK 345 (477)
Q Consensus 269 ~~~~~l~~l~~l~~~-~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~s--K~lg~G~pig~v~~~~~~~~~~~~~ 345 (477)
+ +++ ++++ +++++|+|-|-+ || + ..+.++ + .|++..| |+|++--.+|+++.+++..+.....
T Consensus 145 p----v~~---i~~~~~~~lliVDavSs-~g--~-~~l~~d--~--iDv~~tgsQK~L~~ppGls~v~vs~~Al~~~~~~ 209 (374)
T TIGR01365 145 P----NGD---FIPADREGLTICDATSA-AF--A-QDLDYH--K--LDVVTFSWQKVLGGEGAHGMLILSPRAVARLESY 209 (374)
T ss_pred c----ccc---cccccCCCcEEEEccch-hc--C-CCCChh--H--CcEEEEechhccCCCCceEEEEECHHHHHHHhhc
Confidence 5 343 3333 589999999876 43 2 333333 3 6777554 9999755688999999877654420
Q ss_pred ----------------------ccccCCCC-cHHHHHHHHHHHHhhchh----hHHHHHHHHHHHHHHHHHHHHHhCCCc
Q 011777 346 ----------------------IQFNTFGG-NPVCSAGGLAVLRVIDKE----RRQAHCADVGSHLLGRLRTLQERHDII 398 (477)
Q Consensus 346 ----------------------~~~~t~~~-~~~~~aaa~a~l~~l~~~----~~~~~~~~~~~~l~~~L~~l~~~~~~~ 398 (477)
....|... +..+..+.+.+|+.+.++ +..++.+++.+.+++.++++.. ....
T Consensus 210 ~~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~-l~~~ 288 (374)
T TIGR01365 210 TPAWPLPKIFRLTKGGKLNKKIFEGSTINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNW-IHFL 288 (374)
T ss_pred CCCCCChhhhccccccchhhhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCC-cccC
Confidence 01223333 344445555667655543 3455566666666666666520 1111
Q ss_pred ee-eecccee-EEEEEeeCCC---CCCccHHHHHHHHHHHHHcCceeeccC--CCCCEEEEeCCCCCcHHHHHHHHHHHH
Q 011777 399 GD-VRGRGLM-VGMELVTDRK---EKTPAKAETAVLFEKLRELGVLVGKGG--LHGNVFRIKPPMCFTKDDADFLVDALD 471 (477)
Q Consensus 399 ~~-v~g~g~~-~~i~~~~~~~---~~~~~~~~~~~~~~~l~~~Gv~v~~~~--~~~~~iRi~p~~~~t~e~i~~~l~~l~ 471 (477)
.. ..-++.. ..+.+..+.. ...|.-....++.+.|+++|+.+.+|. ..++.|||..--.++++||+.+++.|+
T Consensus 289 ~~~~~~rS~tvt~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~G~~~~~~~~fRIg~~G~i~~~di~~l~~~l~ 368 (374)
T TIGR01365 289 AETPEIRSNTSVCLKVVDPAIDALDEDAQADFAKELISTLEKEGVAYDIGSYRDAPSGLRIWCGATVEKSDLECLCPWLD 368 (374)
T ss_pred CCChhhcCCCeEEEEeCCccccccccchhhHHHHHHHHHHHHCCEEEeccccccCCCceEEecCCcCCHHHHHHHHHHHH
Confidence 11 1112222 2333311100 001111114678999999999888663 235889999888899999999999999
Q ss_pred HHHhh
Q 011777 472 YSMSK 476 (477)
Q Consensus 472 ~~l~~ 476 (477)
-+...
T Consensus 369 ~~~~~ 373 (374)
T TIGR01365 369 WAFAL 373 (374)
T ss_pred HHHhc
Confidence 77654
No 348
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.30 E-value=8.2e-10 Score=105.48 Aligned_cols=327 Identities=15% Similarity=0.119 Sum_probs=184.6
Q ss_pred CHHHHHHHHHHHhhcc-----ccccccCChHHHHHHHHHHhh--CCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEE
Q 011777 114 HPDVLNAIFEQSKLLQ-----HATTIYLHHAIADFAEALASK--MPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIA 186 (477)
Q Consensus 114 ~p~v~~Av~~~l~~~~-----~~~~~~~~~~~~~l~~~La~~--~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~ 186 (477)
+..+++...+.++... ++.+.+..-.+...++-|.++ .|.+.+.|++|.|.|.|+...|++.... .++.|++
T Consensus 88 p~Dai~RA~~~L~~~gGs~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~-~~~Gvli 166 (475)
T KOG0258|consen 88 PTDAIKRAKRILNDCGGSLGAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAG-KKTGVLI 166 (475)
T ss_pred CHHHHHHHHHHHHhcCCcccccccccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcC-CCCceEe
Confidence 3455555555555432 222233444567777777766 3567789999999999999999987653 6788999
Q ss_pred EccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhcc--CCCCeeEEEecccCCCC
Q 011777 187 LRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFG--TSGKVAGFIAETIQGVG 264 (477)
Q Consensus 187 ~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~--~~~~~a~vi~epi~~~~ 264 (477)
.-+-|.-++.. +++.+ ...+++.......|+-|. ++|++.++.. +-+..++|+++|-|++|
T Consensus 167 PiPQYPLYsAt-i~l~~------------~~~v~YyLdEe~~W~ld~----~el~~~~~eA~k~i~~r~lvvINPGNPTG 229 (475)
T KOG0258|consen 167 PIPQYPLYSAT-ISLLG------------GTQVPYYLDEESNWSLDV----AELERSVDEARKGINPRALVVINPGNPTG 229 (475)
T ss_pred ecCCCchhHHH-HHHhC------------CcccceeeccccCCCCCH----HHHHHHHHHHhccCCceEEEEECCCCccc
Confidence 99999766432 22221 112222222233444444 4555555422 12345789999977665
Q ss_pred CeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccC-CCCCCcccc----ccC-CCccee------eecccccC--ccceE
Q 011777 265 GAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGR-TGSHYWGFE----TQG-VIPDIV------TMAKGIGN--GLPLG 330 (477)
Q Consensus 265 G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr-~G~~~~~~~----~~g-v~pDiv------t~sK~lg~--G~pig 330 (477)
.+.+++-+++|..+|.++|++|+.||||..--+ .+++++++. ..| -.||-+ +.||++.| |.|-|
T Consensus 230 --qvls~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGG 307 (475)
T KOG0258|consen 230 --QVLSEENIEGIICFAAEEGLVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGG 307 (475)
T ss_pred --hhhcHHHHHHHHHHHHHcCeEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCC
Confidence 566899999999999999999999999875433 344565552 122 344433 35799886 88889
Q ss_pred EEEe---CHHHHHhhcccccccCCCCcHHHHHHHHHH----------HHh--hchhhHHHHHHHHHHHHHHHHHHHHHhC
Q 011777 331 AVVT---TPEIANVMAQKIQFNTFGGNPVCSAGGLAV----------LRV--IDKERRQAHCADVGSHLLGRLRTLQERH 395 (477)
Q Consensus 331 ~v~~---~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~----------l~~--l~~~~~~~~~~~~~~~l~~~L~~l~~~~ 395 (477)
++=. .+++.+.+.+... .....+..+++..-.. .+. -+.+...+.++++...+.+.++++
T Consensus 308 YmEv~n~~prv~~qi~Kl~s-i~lc~~V~GQ~~vdl~VnPP~Pgd~Sy~~~~~Ekd~il~~l~~ra~l~~~~~ns~---- 382 (475)
T KOG0258|consen 308 YMESLNRDPRVKQQIKKLAS-IKLCPQVSGQKLVDLVVNPPKPGDPSYDLFSSEKDGILSSLRSRAKLTEDAFNSL---- 382 (475)
T ss_pred eeecccCChhHHHHHHHHHh-hhhcCCccchhhhceecCCCCCCCcchhhhhhhhHhHHHHHHHHhHHHHHHHhhc----
Confidence 8743 3555554432210 0001111111111000 110 012345555666665555555554
Q ss_pred CCceeeeccceeEEEEEeeCC---------CCCCccHHHHHHHHHHHHHcCceeeccCCCC-----CEEEEeCCCCCcHH
Q 011777 396 DIIGDVRGRGLMVGMELVTDR---------KEKTPAKAETAVLFEKLRELGVLVGKGGLHG-----NVFRIKPPMCFTKD 461 (477)
Q Consensus 396 ~~~~~v~g~g~~~~i~~~~~~---------~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~-----~~iRi~p~~~~t~e 461 (477)
+.+.+-+.+|.|+.+.-..-+ ....|+ .-...+.|..-||.+.||..+| -++|.. ...+.
T Consensus 383 ~gi~cn~~qGAMY~fP~i~lP~kaie~A~~~~~~PD---~FYc~~LLe~tGIcvVPGSGFGQ~~GtyH~R~T---iLp~~ 456 (475)
T KOG0258|consen 383 EGISCNPVQGAMYLFPQISLPPKAIEAAKALGIAPD---EFYCLKLLEATGICVVPGSGFGQKEGTYHFRTT---ILPPG 456 (475)
T ss_pred CceeeccCccceeecccccCCHHHHHHHHHhCCCCc---HHHHHHHHHhcCeEEecCCCCCCCCceeEEEEe---ecCch
Confidence 567777888998876432211 011121 1123345556799999985544 246652 22222
Q ss_pred HHHHHHHHHHHH
Q 011777 462 DADFLVDALDYS 473 (477)
Q Consensus 462 ~i~~~l~~l~~~ 473 (477)
+ +.++++.++
T Consensus 457 -~-~~i~~~~~f 466 (475)
T KOG0258|consen 457 -L-EIIEKFKKF 466 (475)
T ss_pred -h-HHHHHHHHH
Confidence 3 556665543
No 349
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.28 E-value=7.6e-09 Score=96.91 Aligned_cols=335 Identities=14% Similarity=0.085 Sum_probs=196.9
Q ss_pred EEeCCCCEEEeecCCcccccCCCCCHHHHHHHH-HHHhhcccc---ccc----cCChHHHHHHHHHHhhCCCCCCEEEEe
Q 011777 90 LFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIF-EQSKLLQHA---TTI----YLHHAIADFAEALASKMPGNLKVVYFV 161 (477)
Q Consensus 90 ~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~-~~l~~~~~~---~~~----~~~~~~~~l~~~La~~~~~~~~~v~~~ 161 (477)
.-+.+|-.|||- |+||-.++.+.+... ...+...+. +.. .....-..|..+|+-+.+....+|..+
T Consensus 26 f~lp~~viyLdg------nSLGa~p~~~~a~~~q~a~deW~~~lirsw~~a~~~W~~lp~~lgdklApLiGA~~~Evvv~ 99 (407)
T COG3844 26 FALPGGVIYLDG------NSLGARPRAVTARLQQVATDEWGEGLIRSWNKAKADWFDLPERLGDKLAPLIGARAGEVVVT 99 (407)
T ss_pred ccCCCCeEEeec------cccccCchHHHHHHHHHHHHHHHhhhhhhhcccCCchhhchhHHHHHhhhhhcCCCCceEEe
Confidence 345677788884 347754434444333 333332111 110 011233566777777777777889888
Q ss_pred CChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHH
Q 011777 162 NSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQ 241 (477)
Q Consensus 162 ~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le 241 (477)
+|.+--+.-.+-.+...+.++.||++++.-.. ++......-....... ..+..+ .. .++++
T Consensus 100 dtts~nl~k~L~aalr~~~~r~vIv~E~~~fp-Tdly~a~g~~~~~~~~---~~~~~~-----------~~----P~~~~ 160 (407)
T COG3844 100 DTTSINLFKVLAAALRPQEGRRVIVSEGDNFP-TDLYIAEGLADLLGIG---YDLEGV-----------IA----PRALE 160 (407)
T ss_pred CCcchHHHHHHHHHhccCCCceEEeecCCCCC-cchhhhcchhhhhccc---ccceee-----------eC----hHHHH
Confidence 88776555555555555556667777664322 1211111100000000 000000 01 25777
Q ss_pred HHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCcc--eeee
Q 011777 242 DHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPD--IVTM 319 (477)
Q Consensus 242 ~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pD--ivt~ 319 (477)
+++. ++++.|++..++--+|.... +.+|-+++++||++++.|=.++ .| ....+...-..| |-|-
T Consensus 161 ~~~~----dd~AvV~L~~V~y~TGql~d----m~aiT~~AH~~galv~wDLAHs----aG--avp~~Lh~~gaDfaigcs 226 (407)
T COG3844 161 EAIT----DDVAVVLLSHVNYKTGQLLD----MRAITALAHQHGALVGWDLAHS----AG--AVPVDLHAAGADFAIGCS 226 (407)
T ss_pred Hhhc----cceEEEEeccccccccceee----HHHHHHHHHhcCceEEeehhcc----cC--CcceeecccCCCeeeeee
Confidence 7776 78999999999999997776 8999999999999999998887 34 233444333344 4455
Q ss_pred cccccCcc-ceEEEEeCHHHHHhhcccc--------------------cccCC--C-CcHHHHHHHHHHHHhhch---hh
Q 011777 320 AKGIGNGL-PLGAVVTTPEIANVMAQKI--------------------QFNTF--G-GNPVCSAGGLAVLRVIDK---ER 372 (477)
Q Consensus 320 sK~lg~G~-pig~v~~~~~~~~~~~~~~--------------------~~~t~--~-~~~~~~aaa~a~l~~l~~---~~ 372 (477)
=|-+++|. ..+++.+.++..+...+.. +..-| + .+-.++++...+|++..+ .+
T Consensus 227 yKYLNgGPGapa~l~v~~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa~~~i~~ 306 (407)
T COG3844 227 YKYLNGGPGAPAGLFVAPRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFADVDITE 306 (407)
T ss_pred ceeccCCCCCceeEEeccccccccccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhhhhcCHHH
Confidence 59998763 4456666555444332110 00011 1 234455555567776544 45
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCce----eeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCCCC
Q 011777 373 RQAHCADVGSHLLGRLRTLQERHDIIG----DVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLHGN 448 (477)
Q Consensus 373 ~~~~~~~~~~~l~~~L~~l~~~~~~~~----~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~ 448 (477)
+.++...+.+++.+.+......++.-. .-..+|.-+.+.. | ...++++.|.++||+.-- ...+
T Consensus 307 lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~~h--------p---~~~~V~qaLi~rGVigD~--R~P~ 373 (407)
T COG3844 307 LRKKSLALTDYFIELVEARCEYYGLTLVTPRAHEERGSQVSLYH--------P---HGYQVMQALIDRGVIGDF--REPD 373 (407)
T ss_pred HHHhhhHHHHHHHHHHHhccccCCcEEeccchhhhccceeeEec--------C---cHHHHHHHHHHcCccccc--cCCC
Confidence 666666777788777766554443211 1112344434333 1 256799999999998643 2368
Q ss_pred EEEEeC-CCCCcHHHHHHHHHHHHHHHhh
Q 011777 449 VFRIKP-PMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 449 ~iRi~p-~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
++||.| |+..+-+|+=.+++.|++++.+
T Consensus 374 vlRfgftPlY~~~~DVw~AV~~L~evL~t 402 (407)
T COG3844 374 VLRFGFTPLYVSFVDVWDAVDALEEVLDT 402 (407)
T ss_pred eeeecCccceechhHHHHHHHHHHHHHHh
Confidence 999965 6788999999999999999875
No 350
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.26 E-value=3e-09 Score=105.49 Aligned_cols=291 Identities=16% Similarity=0.136 Sum_probs=171.0
Q ss_pred ccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCC
Q 011777 130 HATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKY 209 (477)
Q Consensus 130 ~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~ 209 (477)
+.+++..+|....|.+.++++-+. +..+.++||..|+..++..... .+++|+..+..|.|..........
T Consensus 55 ~~Y~R~~nPT~~~lE~~~a~LEg~--~~~~afsSGmaAI~~~~l~ll~--~GD~vl~~~~~YG~t~~~~~~~l~------ 124 (396)
T COG0626 55 YDYSRTGNPTRDALEEALAELEGG--EDAFAFSSGMAAISTALLALLK--AGDHVLLPDDLYGGTYRLFEKILQ------ 124 (396)
T ss_pred cccccCCCccHHHHHHHHHHhhCC--CcEEEecCcHHHHHHHHHHhcC--CCCEEEecCCccchHHHHHHHHHH------
Confidence 334456689999999999998744 6789999999999998765433 568899988888765443332211
Q ss_pred CCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEE
Q 011777 210 PIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCI 289 (477)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI 289 (477)
..|+....+... + .+++++.+. ++++++|++|+..|+.--++. +++|.++|+++|+++|
T Consensus 125 ---~~gi~~~~~d~~-------~----~~~~~~~~~---~~~tk~v~lEtPsNP~l~v~D----I~~i~~~A~~~g~~vv 183 (396)
T COG0626 125 ---KFGVEVTFVDPG-------D----DEALEAAIK---EPNTKLVFLETPSNPLLEVPD----IPAIARLAKAYGALVV 183 (396)
T ss_pred ---hcCeEEEEECCC-------C----hHHHHHHhc---ccCceEEEEeCCCCccccccc----HHHHHHHHHhcCCEEE
Confidence 123333321110 0 134555444 257999999998777655555 9999999999999999
Q ss_pred EcCcccCccCCCCCCccccccCCCccee--eecccccC-c-cceEEEEeCHH-HHHhhcccccc-cCCCCcHHHHHHHHH
Q 011777 290 ADEVQTGFGRTGSHYWGFETQGVIPDIV--TMAKGIGN-G-LPLGAVVTTPE-IANVMAQKIQF-NTFGGNPVCSAGGLA 363 (477)
Q Consensus 290 ~DEv~~gfgr~G~~~~~~~~~gv~pDiv--t~sK~lg~-G-~pig~v~~~~~-~~~~~~~~~~~-~t~~~~~~~~aaa~a 363 (477)
+|..... + ..++-+..-.||+ +.+|-++| + .-.|.++++.+ +.+.+...... ......|..+...+.
T Consensus 184 VDNTfat----P---~~q~PL~~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~~~~G~~l~p~dA~l~lR 256 (396)
T COG0626 184 VDNTFAT----P---VLQRPLELGADIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFAQRANTGAVLSPFDAWLLLR 256 (396)
T ss_pred EECCccc----c---cccChhhcCCCEEEEeccccccCCcceeeeEEecChHHHHHHHHHHHHhhcCCCCCHHHHHHHHh
Confidence 9998762 2 1123233346777 47799998 3 55676776554 55544211110 111234555554444
Q ss_pred HHHhhchhhHHHHHHHHHHHHHHHHHHHHHhCCCcee------------------eeccceeEEEEEeeCCCCCCccHHH
Q 011777 364 VLRVIDKERRQAHCADVGSHLLGRLRTLQERHDIIGD------------------VRGRGLMVGMELVTDRKEKTPAKAE 425 (477)
Q Consensus 364 ~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~------------------v~g~g~~~~i~~~~~~~~~~~~~~~ 425 (477)
.|+.+. -..++..++...+.+.|.+ ++.+.. ..|.|.++.+++... ..
T Consensus 257 GlkTL~--~Rm~~~~~nA~~IA~~L~~----~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~~--------~~ 322 (396)
T COG0626 257 GLRTLA--LRMERHNENALKIAEFLAD----HPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKNE--------EA 322 (396)
T ss_pred ccchHH--HHHHHHHHHHHHHHHHHhc----CCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCCh--------HH
Confidence 444332 1234444444444444443 443322 224788888888531 23
Q ss_pred HHHHHHHHHHcCcee----------ecc---------------CCCCCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 426 TAVLFEKLRELGVLV----------GKG---------------GLHGNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 426 ~~~~~~~l~~~Gv~v----------~~~---------------~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
+.++.+.|.--.+.. .|. |..++.+|++..+ |+++.+++-|++++++
T Consensus 323 ~~~f~~~L~l~~~a~SlGgveSLi~~pa~~th~~~~~~~r~~~Gi~~~LvRlSVGl----Ed~eDLi~Dl~~Al~~ 394 (396)
T COG0626 323 AKKFLDSLKLFKLAESLGGVESLISHPATMTHASIPLEERAKAGITDGLVRLSVGL----EDVEDLIADLEQALAK 394 (396)
T ss_pred HHHHHHhCCccEEeccCCCcccccccccccCcccCCHhHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHHh
Confidence 445555443222111 110 2235789997665 5566666666666654
No 351
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.26 E-value=5.3e-12 Score=121.60 Aligned_cols=201 Identities=19% Similarity=0.180 Sum_probs=120.0
Q ss_pred CCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCcc
Q 011777 113 CHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYH 192 (477)
Q Consensus 113 ~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yh 192 (477)
.+|++.+++.+ ..... . ..+.++...++.++++++++. +.++|+.|||.||..+++.... +...||.-+. .|
T Consensus 7 ~~~~m~~a~~~-a~~gd-~-~Yg~D~~~~~l~~~i~~l~g~--e~a~f~~sGT~An~~al~~~~~--~~~~vi~~~~-aH 78 (290)
T PF01212_consen 7 PTPAMLEAMAA-ANVGD-D-AYGEDPTTARLEERIAELFGK--EAALFVPSGTMANQLALRAHLR--PGESVICADT-AH 78 (290)
T ss_dssp S-HHEEHHHHH-TTSB--C-CTTSSHHHHHHHHHHHHHHTS--SEEEEESSHHHHHHHHHHHHHH--TTEEEEEETT-EH
T ss_pred CCHHHHHHHHc-cccCC-c-ccCCChhHHHHHHHHHHHcCC--CEEEEeCCCChHHHHHHHHHHh--cCCceecccc-ce
Confidence 57999999944 33222 1 234578889999999999954 6778999999999999997653 4455555433 44
Q ss_pred CCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhcc--CCCCeeEEEecccCCCCCeeeCC
Q 011777 193 GGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFG--TSGKVAGFIAETIQGVGGAVELA 270 (477)
Q Consensus 193 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~--~~~~~a~vi~epi~~~~G~~~~~ 270 (477)
-.....-..... .|...++++....+.++ +++|++.++.. |..++++|.+|..++..|..+++
T Consensus 79 i~~~E~ga~~~~---------~G~~~~~l~~~~~G~l~------~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s 143 (290)
T PF01212_consen 79 IHFDETGAIEEL---------SGAKLIPLPSDDDGKLT------PEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYS 143 (290)
T ss_dssp HHHSSTTHHHHH---------TTCEEEEEBECTGTBB-------HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---
T ss_pred eeeeccchhhHh---------cCcEEEECCCcccCCCC------HHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCC
Confidence 332222111000 13333333332212232 68899888742 34678999999877775557889
Q ss_pred chhHHHHHHHHHHhCcEEEEcCcccCc--cCCCCCCccccccCCCcceeeec--ccccCccceE-EEEeCHHHHHh
Q 011777 271 PGYLKLVYDIVRKAGGVCIADEVQTGF--GRTGSHYWGFETQGVIPDIVTMA--KGIGNGLPLG-AVVTTPEIANV 341 (477)
Q Consensus 271 ~~~l~~l~~l~~~~gillI~DEv~~gf--gr~G~~~~~~~~~gv~pDivt~s--K~lg~G~pig-~v~~~~~~~~~ 341 (477)
.+.|++|.++|++||+.++.|-+--.- ...| . .....-...|++++| |.++ .+.| .+++++++++.
T Consensus 144 ~~el~ai~~~a~~~gl~lhmDGARl~~a~~~~~-~--~~~e~~~~~D~v~~~~tK~~g--~~~Gavl~~~~~~i~~ 214 (290)
T PF01212_consen 144 LEELRAISELAREHGLPLHMDGARLANAAAALG-V--SLAEIAAGADSVSFGGTKNGG--APGGAVLAGNKEFIAK 214 (290)
T ss_dssp HHHHHHHHHHHHHHT-EEEEEETTHHHHHCHHH-H--HHHHHHTTSSEEEEETTSTT---SSSEEEEEESHHHHHH
T ss_pred HHHHHHHHHHHHhCceEEEEehhhHHHhhhccc-c--cHHHHhhhCCEEEEEEEcccc--cccceEEEechHHHHH
Confidence 999999999999999999999652100 0001 0 011111345777654 7654 3444 55678886544
No 352
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.21 E-value=8.7e-09 Score=102.49 Aligned_cols=349 Identities=14% Similarity=0.119 Sum_probs=182.7
Q ss_pred CEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHH
Q 011777 96 RRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMA 175 (477)
Q Consensus 96 ~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~a 175 (477)
..|||+.+-.++. -..++..+||.. +.- ...-++...+|.+..+++++ .+.++++.+|..|+..+++..
T Consensus 41 dV~IDLrSDTgT~---apS~~m~aAM~~----GDD--~Y~gdpSv~~Lee~vael~G--~E~alpthqGRgaE~Il~~~~ 109 (467)
T TIGR02617 41 DVFIDLLTDSGTG---AVTQSMQAAMMR----GDE--AYSGSRSYYALAESVKNIFG--YQYTIPTHQGRGAEQIYIPVL 109 (467)
T ss_pred CeEEECccCCCCC---CCCHHHHHHHHc----CCc--ccccCchHHHHHHHHHHHhC--CceEEECCCCchHHHHHHHhh
Confidence 4589999887652 246777887764 211 11235668899999999994 478999999999999888754
Q ss_pred HhccCCceEE------EEccCccCCcc-cccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccC
Q 011777 176 RLSTGNLGMI------ALRNAYHGGSS-GTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGT 248 (477)
Q Consensus 176 r~~~~~~~ii------~~~~~yhG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~ 248 (477)
... +++.++ ++.+.||-.+. +...+++..... .........+.+.++++.++ +++|+++|+...
T Consensus 110 ~~~-~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~--l~~~ea~~~~~~~~fkG~~d------l~~le~~I~~~g 180 (467)
T TIGR02617 110 IKK-REQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTARN--VYTKEAFDTGVRYDFKGNFD------LEGLERGIEEVG 180 (467)
T ss_pred ccc-ccccccccccccccceEEEEecchHHHHHcCceeec--ccchhhcccccCCCCCCCcC------HHHHHHHHhhcC
Confidence 331 111111 11122332221 122222111000 00000000111223333343 688999987433
Q ss_pred CCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCccc----Cc------cCCCCCCccc-cccCCCccee
Q 011777 249 SGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQT----GF------GRTGSHYWGF-ETQGVIPDIV 317 (477)
Q Consensus 249 ~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~----gf------gr~G~~~~~~-~~~gv~pDiv 317 (477)
.+++..+...-.+|..|..+.+.+.+++++++|++||+.++.|-+-- -| +..|....-+ ...--..|.+
T Consensus 181 ~~~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsv 260 (467)
T TIGR02617 181 PNNVPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADML 260 (467)
T ss_pred CCCceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEE
Confidence 35666666665556656678899999999999999999999997531 11 2222111100 0001124655
Q ss_pred --eecccccCccceE-EEEeCHH----HHHhhccc----ccccCCCCcHH-HHHHHHHHHHhhchhhHHHHHHHHHHHHH
Q 011777 318 --TMAKGIGNGLPLG-AVVTTPE----IANVMAQK----IQFNTFGGNPV-CSAGGLAVLRVIDKERRQAHCADVGSHLL 385 (477)
Q Consensus 318 --t~sK~lg~G~pig-~v~~~~~----~~~~~~~~----~~~~t~~~~~~-~~aaa~a~l~~l~~~~~~~~~~~~~~~l~ 385 (477)
|+||+++ .|+| +++++++ +.+..+.. ..+-||+|-.- -+.|....|+...+++++.+--...++|.
T Consensus 261 t~slsKglg--ApvGg~Lag~d~~~~~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e~~~~~yl~~ri~qv~yl~ 338 (467)
T TIGR02617 261 AMSAKKDAM--VPMGGLLCFKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNLDWLAYRINQVQYLV 338 (467)
T ss_pred EEEcCCCCC--CcccceEEecchhHHHHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhhcccHHHHHHHHHHHHHHH
Confidence 5678775 3554 6666654 23332221 23456665321 22222223544444556655556667787
Q ss_pred HHHHHHHHhCCCceeeeccceeEEEEEee----CCCCCCccHHHHHHHHHHH-HHcCcee---ecc-------C-C--C-
Q 011777 386 GRLRTLQERHDIIGDVRGRGLMVGMELVT----DRKEKTPAKAETAVLFEKL-RELGVLV---GKG-------G-L--H- 446 (477)
Q Consensus 386 ~~L~~l~~~~~~~~~v~g~g~~~~i~~~~----~~~~~~~~~~~~~~~~~~l-~~~Gv~v---~~~-------~-~--~- 446 (477)
++|.+. ..|++. + -|.-+.++-.. -+....|. ..+.-+| ++-||-. +.. + . .
T Consensus 339 ~~L~~~--Gvpi~~-~--Gghav~iDa~~~lphip~~~fpa----~al~~~ly~~~GiR~~e~G~~~~~rd~~~~~~~~~ 409 (467)
T TIGR02617 339 NGLEEI--GVVCQQ-A--GGHAAFVDAGKLLPHIPADQFPA----HALACELYKVAGIRAVEIGSLLLGRDPKTGKQLPC 409 (467)
T ss_pred HHHHhC--CCcEEe-c--CccEEEEehhhhCCCCChhhCcH----HHHHHHHHHHcCcceEeecceecccCCCCCccCCC
Confidence 777664 223322 2 23333343211 11122232 3333333 3444432 111 0 0 0
Q ss_pred -CCEEEEeCCC-CCcHHHHHHHHHHHHHHHh
Q 011777 447 -GNVFRIKPPM-CFTKDDADFLVDALDYSMS 475 (477)
Q Consensus 447 -~~~iRi~p~~-~~t~e~i~~~l~~l~~~l~ 475 (477)
-..+|+..|- +.|.+++|...+++..+.+
T Consensus 410 ~~el~RlaipRrvyt~~h~d~v~~~~~~~~~ 440 (467)
T TIGR02617 410 PAELLRLTIPRATYTQTHMDFIIEAFKHVKE 440 (467)
T ss_pred ccceeeeccccccccHhHHHHHHHHHHHHHh
Confidence 1467886554 4589999999999988765
No 353
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.20 E-value=2.7e-09 Score=102.52 Aligned_cols=299 Identities=15% Similarity=0.186 Sum_probs=165.3
Q ss_pred hHHHHHHHHHHhhCCC-C-----CC--EEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCC
Q 011777 138 HAIADFAEALASKMPG-N-----LK--VVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKY 209 (477)
Q Consensus 138 ~~~~~l~~~La~~~~~-~-----~~--~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~ 209 (477)
+...++.+.+.+++-+ + .+ ..+-|.|||-|+-.+-+......++..|.+.++++..+.......
T Consensus 69 ~G~~~f~~~~~~llFG~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If~~a-------- 140 (396)
T COG1448 69 EGLPEFLEAVQKLLFGADSPALAEDRVATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKAIFEAA-------- 140 (396)
T ss_pred CCcHHHHHHHHHHhcCCCcHHHHhhhHhheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHHHHhc--------
Confidence 3355666666665432 1 11 235678999999999987777777888888888885443222222
Q ss_pred CCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEE
Q 011777 210 PIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCI 289 (477)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI 289 (477)
|+....+|+-......-| .+.+-..++...++. ..++-.+-+|++| +-++.+.|++|.++.++.|.+-+
T Consensus 141 -----Gl~v~~Y~Yyd~~~~~~d----f~~mla~L~~a~~~~-vvLLH~CcHNPTG-~D~t~~qW~~l~~~~~~r~lip~ 209 (396)
T COG1448 141 -----GLEVETYPYYDAETKGLD----FDGMLADLKTAPEGS-VVLLHGCCHNPTG-IDPTEEQWQELADLIKERGLIPF 209 (396)
T ss_pred -----CCceeeeecccccccccc----HHHHHHHHHhCCCCC-EEEEecCCCCCCC-CCCCHHHHHHHHHHHHHcCCeee
Confidence 222222222111000011 233333344333333 3444455677777 67899999999999999999999
Q ss_pred EcCcccCccCCCCC-Ccccccc-CCCc-cee--eecccccC-ccceEEEEe---CHHHHHhhccc---ccccCCCCcHH-
Q 011777 290 ADEVQTGFGRTGSH-YWGFETQ-GVIP-DIV--TMAKGIGN-GLPLGAVVT---TPEIANVMAQK---IQFNTFGGNPV- 356 (477)
Q Consensus 290 ~DEv~~gfgr~G~~-~~~~~~~-gv~p-Div--t~sK~lg~-G~pig~v~~---~~~~~~~~~~~---~~~~t~~~~~~- 356 (477)
+|=+|.||+..... .++...+ ...+ -++ +|||.||- |-|+|++.. +++..+.+... .--++|+.+|-
T Consensus 210 ~D~AYQGF~~GleeDa~~lR~~a~~~~~~lva~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~~ 289 (396)
T COG1448 210 FDIAYQGFADGLEEDAYALRLFAEVGPELLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPAH 289 (396)
T ss_pred eehhhhhhccchHHHHHHHHHHHHhCCcEEEEehhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhccCCCchh
Confidence 99999999753311 1111111 1122 333 58899995 899986643 34444433321 11244544332
Q ss_pred HHHHHHHHHHh--h------chhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHH
Q 011777 357 CSAGGLAVLRV--I------DKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAV 428 (477)
Q Consensus 357 ~~aaa~a~l~~--l------~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~ 428 (477)
++......|+- + +-+.+.+++.+++..|.+.|++.......-.-....|+|...-+ ..++
T Consensus 290 Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri~~mR~~lv~~L~~~~~~~~f~~i~~Q~GMFsy~Gl------------s~~Q 357 (396)
T COG1448 290 GAAVVATILNNPELRAEWEQELEEMRQRILEMRQALVDALKALGAPRNFDFIISQRGMFSYTGL------------SPEQ 357 (396)
T ss_pred hHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchHhhcCceeecCCC------------CHHH
Confidence 22222222221 0 01234566666666666666664333222222334455443222 1234
Q ss_pred HHHHHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHHH
Q 011777 429 LFEKLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADFLVDALDYSM 474 (477)
Q Consensus 429 ~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l 474 (477)
+.+...+.||+....| ||+.. .+++..|+.+.+.+.+++
T Consensus 358 V~rLree~~IY~v~sG------Ri~va-Gl~~~ni~~va~ai~~v~ 396 (396)
T COG1448 358 VDRLREEFGIYLVASG------RINVA-GLNTSNIDYVAKAIAAVL 396 (396)
T ss_pred HHHHHHhccEEEecCC------eeeec-cCChhhHHHHHHHHHhhC
Confidence 4444456799987654 77654 578899999999988753
No 354
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.16 E-value=7.1e-09 Score=99.88 Aligned_cols=303 Identities=13% Similarity=0.114 Sum_probs=168.9
Q ss_pred ChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHH-HHHHHHhcc-----------CCceEEEEccCccCCcccccccccC
Q 011777 137 HHAIADFAEALASKMPGNLKVVYFVNSGTEANEL-AMLMARLST-----------GNLGMIALRNAYHGGSSGTIGLTAL 204 (477)
Q Consensus 137 ~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~-Al~~ar~~~-----------~~~~ii~~~~~yhG~~~~~~~~~~~ 204 (477)
-..+.++++..+++++.+.++|+..++.|--++. .+..+..+. ++-++++..++|-.+...+..
T Consensus 68 l~Gipe~r~l~a~llgv~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFai~E~---- 143 (425)
T PF12897_consen 68 LDGIPEARELFAELLGVPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFAITEH---- 143 (425)
T ss_dssp SS--HHHHHHHHHHHTS-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHHHHHHH----
T ss_pred cCChHHHHHHHHHHhCCCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHHHHHHh----
Confidence 3456777888888888777887777666654433 222222211 245788888888654332222
Q ss_pred CCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHH-HHH
Q 011777 205 NTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDI-VRK 283 (477)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l-~~~ 283 (477)
.|+..+++|....+| | ++.+|+++.. ...+++++|-|..++...+..+.+-.+++.++ +..
T Consensus 144 ---------~Giemi~VpM~~dGP---D----mD~Ve~LV~~--D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA 205 (425)
T PF12897_consen 144 ---------FGIEMIPVPMTEDGP---D----MDMVEELVAE--DPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAA 205 (425)
T ss_dssp ---------CT-EEEEEEEETTEE--------HHHHHHHTHT--STTEEEEEE-SSS-TTT-----HHHHHHHHHS--SS
T ss_pred ---------hCcEEEecCCCCCCC---C----HHHHHHHHhc--CCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCC
Confidence 355655555433222 1 5788888852 36799999999655544477899999999888 456
Q ss_pred hCcEEEEcCcccCccCCCC--CCc--cc----cccCCCccee----eecccccCccceEEEEeCHHHHHhhcccccccCC
Q 011777 284 AGGVCIADEVQTGFGRTGS--HYW--GF----ETQGVIPDIV----TMAKGIGNGLPLGAVVTTPEIANVMAQKIQFNTF 351 (477)
Q Consensus 284 ~gillI~DEv~~gfgr~G~--~~~--~~----~~~gv~pDiv----t~sK~lg~G~pig~v~~~~~~~~~~~~~~~~~t~ 351 (477)
.+.-|+.|.+|+---.++. ..- .+ ...| .||.+ +.||---.|-.++++.++++-++.+.......|.
T Consensus 206 ~DFRI~WDNAY~vHhL~~~~~~~~~~nil~~~~~AG-npdrv~~F~STSKITf~GaGva~~aaS~~Nl~~~~~~~~~~tI 284 (425)
T PF12897_consen 206 PDFRIFWDNAYAVHHLYDEEPRDALLNILDACAKAG-NPDRVYVFASTSKITFPGAGVAFFAASEANLAWIKKHLSVQTI 284 (425)
T ss_dssp TT-EEEEE-TTTT-BSSSSSS------HHHHHHHTT--TTSEEEEEESTTTS-TTSS-EEEEE-HHHHHHHHHHHHHH-S
T ss_pred cCeEEEeecCceEeeccccccchhhhHHHHHHHHcC-CCCeEEEEecccccccCCcceeeeecCHHHHHHHHHHhcCcee
Confidence 8999999999872111110 000 00 0111 35533 6789888888999999999988888766666778
Q ss_pred CCcHHHHHHHHHHHHhhchh-hHHHHHHHHHHHHHHHHHHH----HHh----CCCceeeec-cceeEEEEEeeCCCCCCc
Q 011777 352 GGNPVCSAGGLAVLRVIDKE-RRQAHCADVGSHLLGRLRTL----QER----HDIIGDVRG-RGLMVGMELVTDRKEKTP 421 (477)
Q Consensus 352 ~~~~~~~aaa~a~l~~l~~~-~~~~~~~~~~~~l~~~L~~l----~~~----~~~~~~v~g-~g~~~~i~~~~~~~~~~~ 421 (477)
+.+-+.|..-..-++- .+ ++.+++++..+.++-++... .++ .++.....+ -|.|+.++....
T Consensus 285 gpdKvNQLRHvrff~d--~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsld~~~G------ 356 (425)
T PF12897_consen 285 GPDKVNQLRHVRFFKD--AEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPKGGYFISLDVLDG------ 356 (425)
T ss_dssp ---HHHHHHHHHHHHS--HHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEEEESTT------
T ss_pred CccHHHHHHHHHHhcC--hhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEEecCCC------
Confidence 8888888776666653 34 67788888777666555432 122 233333333 367777776431
Q ss_pred cHHHHHHHHHHHHHcCceeeccCC--------CCCEEEEeCCCCCcHHHHHHHHHHHHHHH
Q 011777 422 AKAETAVLFEKLRELGVLVGKGGL--------HGNVFRIKPPMCFTKDDADFLVDALDYSM 474 (477)
Q Consensus 422 ~~~~~~~~~~~l~~~Gv~v~~~~~--------~~~~iRi~p~~~~t~e~i~~~l~~l~~~l 474 (477)
.+.++++.+++.||.+.+.|. ....|||.|++ -+.+|++.+++.+.-++
T Consensus 357 ---~AkrvV~lakeAGV~LT~AGAtfPyg~DP~D~nIRiAPS~-P~leel~~Am~~~~~cv 413 (425)
T PF12897_consen 357 ---TAKRVVELAKEAGVALTPAGATFPYGKDPRDSNIRIAPSY-PSLEELETAMDVFATCV 413 (425)
T ss_dssp ----HHHHHHHHHHTTEE---TTTTSGGG--TTS-EEEE--SS-S-HHHHHHHHHHHHHHH
T ss_pred ---hHHHHHHHHHHhCceeCCCCCCCCCCCCCCCCcEEecCCC-CCHHHHHHHHHHHHHHH
Confidence 367899999999999987532 24689999876 57899999999886554
No 355
>PLN02271 serine hydroxymethyltransferase
Probab=99.16 E-value=4.1e-08 Score=100.56 Aligned_cols=281 Identities=14% Similarity=0.003 Sum_probs=151.0
Q ss_pred CChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCC-cCCCCCCCHHHHHHHH
Q 011777 162 NSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDP-YHGSFGSDAARYAQDL 240 (477)
Q Consensus 162 ~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l 240 (477)
.||+.||.+++... ..++++|+..+..+-|+........ ...+.......+..++++.. .....+ .+++
T Consensus 221 ~SGs~AN~aV~~AL--l~PGD~IL~ldl~~GGHlshg~~~~--~g~~vs~sG~~~~~vpY~~d~~~g~ID------yd~l 290 (586)
T PLN02271 221 YSCTSANFAVYTGL--LLPGDRIMGLDSPSGGHMSHGYYTP--GGKKVSGASIFFESLPYKVNPQTGYID------YDKL 290 (586)
T ss_pred ccHHHHHHHHHHHh--cCCCCEEEEecCCCCCchhcccccc--cccccccccceEEEEEcccccccCccC------HHHH
Confidence 39999999988654 3477889888775555433211000 00000000011233332221 111111 4777
Q ss_pred HHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCcceeeec
Q 011777 241 QDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMA 320 (477)
Q Consensus 241 e~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~s 320 (477)
++... ..++++||+...... ..-.+++++++|+++|++|++|-.|. .|.-....+ ...-...|+++++
T Consensus 291 ek~a~---~~rPKLII~g~Sayp------r~~D~~~i~eIAdevGA~LmvD~AH~-aGLIa~g~~--~sP~~~aDvvt~T 358 (586)
T PLN02271 291 EEKAL---DFRPKILICGGSSYP------REWDYARFRQIADKCGAVLMCDMAHI-SGLVAAKEC--VNPFDYCDIVTST 358 (586)
T ss_pred HHHhh---hcCCeEEEECchhcc------CcCCHHHHHHHHHHcCCEEEEECccc-ccccccCcC--CCCCcCCcEEEeC
Confidence 77443 257788888553332 22228999999999999999999987 333211111 1111136888755
Q ss_pred --ccccCccceEEEEeCHH--------------------HHHhhcccccccCCCCcHHH-HHHHHHHHHhhch---hhHH
Q 011777 321 --KGIGNGLPLGAVVTTPE--------------------IANVMAQKIQFNTFGGNPVC-SAGGLAVLRVIDK---ERRQ 374 (477)
Q Consensus 321 --K~lg~G~pig~v~~~~~--------------------~~~~~~~~~~~~t~~~~~~~-~aaa~a~l~~l~~---~~~~ 374 (477)
|+|.|.-. |.++.+++ +.+.+......+..+++... +++...+++.+.. .++.
T Consensus 359 THKtLrGPrG-G~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~~efk~Ya 437 (586)
T PLN02271 359 THKSLRGPRG-GIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKAYM 437 (586)
T ss_pred CcccCCCCCc-eEEEecccccccccCCccccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHhChHHHHHH
Confidence 99976322 77777754 33333322222333333222 3333345665443 3466
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccC-------CCC
Q 011777 375 AHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGG-------LHG 447 (477)
Q Consensus 375 ~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~-------~~~ 447 (477)
+++.++.+.|.+.|.+. .+.++..-. ...++.+++... ........+.|.+-||.+.... ...
T Consensus 438 ~QVv~NAkaLA~~L~~~--G~~vv~ggT-dnHlvLvDl~~~-------g~~G~~ae~~Le~~~I~~Nkn~iP~d~~~~~p 507 (586)
T PLN02271 438 QQVKKNAQALASALLRR--KCRLVTGGT-DNHLLLWDLTTL-------GLTGKNYEKVCEMCHITLNKTAIFGDNGTISP 507 (586)
T ss_pred HHHHHHHHHHHHHHHHC--CCeEeeCCC-CcceeeecCccc-------CCCHHHHHHHHHHcCeEeccccCCCCCCCCCC
Confidence 67777777777777654 233332111 244566666321 1113445566667799885431 112
Q ss_pred CEEEEeCCCCC----cHHHHHHHHHHHHHHHh
Q 011777 448 NVFRIKPPMCF----TKDDADFLVDALDYSMS 475 (477)
Q Consensus 448 ~~iRi~p~~~~----t~e~i~~~l~~l~~~l~ 475 (477)
+-|||..|..+ .++|+++..+.|.++++
T Consensus 508 sGiRiGT~alT~rG~~e~d~~~iA~~i~~~~~ 539 (586)
T PLN02271 508 GGVRIGTPAMTSRGCLESDFETIADFLLRAAQ 539 (586)
T ss_pred CcccccCHHHHhcCCCcHHHHHHHHHHHHHHh
Confidence 45888655443 56888888888877764
No 356
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.16 E-value=2.3e-08 Score=98.91 Aligned_cols=320 Identities=14% Similarity=0.055 Sum_probs=182.7
Q ss_pred eecCCcccccCCCCCHHHHHHHHHHHhhc----------cccccccCChHHHHHHHHHHhhCCC--CCCEEEEeCChHHH
Q 011777 100 DAFAGIVTVSCGHCHPDVLNAIFEQSKLL----------QHATTIYLHHAIADFAEALASKMPG--NLKVVYFVNSGTEA 167 (477)
Q Consensus 100 D~~~g~~~~~lGh~~p~v~~Av~~~l~~~----------~~~~~~~~~~~~~~l~~~La~~~~~--~~~~v~~~~sGseA 167 (477)
.|..|-.. -+++|.+++.+.+.+. .|.+.. ......+..+.|.+++.. +.+.+++..|||.+
T Consensus 7 nF~aGPa~-----lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~-F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~ 80 (364)
T PRK12462 7 NFSGGPGA-----LPDTVLEQVRQAVVELPETGLSVLGMSHRSSW-FSSLLAQAEADLRDLLGIPDEYGVVFLQGGSSLQ 80 (364)
T ss_pred eecCCCcC-----CCHHHHHHHHHHHhcccccCccccccccccHH-HHHHHHHHHHHHHHHhCCCCCCeEEEEeccHHHH
Confidence 45555542 3789999998777652 222211 134456777778887753 45556666779999
Q ss_pred HHHHHHHHHhccCCceEE-EEccCccCCcccccccccCCCCCCCCCCCCeeeec--CCCCcCCCCCCCHHHHHHHHHHHH
Q 011777 168 NELAMLMARLSTGNLGMI-ALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVV--NPDPYHGSFGSDAARYAQDLQDHI 244 (477)
Q Consensus 168 ~~~Al~~ar~~~~~~~ii-~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~le~~i 244 (477)
.++++.-... ++++++ +...++.|....-.+..-. .+..+. ....+..... .+++
T Consensus 81 ~ea~~~Nll~--~g~~~~~~~~tG~fg~r~~~ea~~~g----------~v~~~~~~~~~~~~~~p~------~~~~---- 138 (364)
T PRK12462 81 FSMIPMNFSR--PGAAAPEYVTTGYWSRKAIGEASRVA----------AMRVVWDGAASGYRTLPS------LAEL---- 138 (364)
T ss_pred HHHHHHHcCC--CCCcEEEEEeCCHHHHHHHHHHHhcC----------CceEecCcCCCCCCcCCC------HHHh----
Confidence 9988874432 344454 5555655543322221100 011110 0001100000 1222
Q ss_pred hccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCcceeeec--cc
Q 011777 245 DFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMA--KG 322 (477)
Q Consensus 245 ~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~s--K~ 322 (477)
+ . ..+.+.|.+..+...+|+..+ ++.+.+++++|+|-+-+ ++ + ..+.++.+ |++..| |+
T Consensus 139 ~-~-~~d~~~v~~t~NETstGv~~~---------~~~~~~~~llvvD~sS~-~~--s-~pid~~~~----dvi~agsQKn 199 (364)
T PRK12462 139 D-W-DARAPFRHYVSNETVEGLQFP---------DAAGLPDSPLIADMSSD-FM--S-RPFDVEAY----GMVYAHAQKN 199 (364)
T ss_pred c-c-CCCCcEEEEccCCCCceEecC---------cccccCCCeEEEEcCch-hh--C-CCCChHHc----cEEEeecccc
Confidence 1 1 134566777776666775553 23334799999998866 32 2 34444444 777554 99
Q ss_pred ccCccceEEEEeCHHHHHhhccc-----------ccccCCCCc-HHHHHHHHHHHHhhchh--h---HHHHHHHHHHHHH
Q 011777 323 IGNGLPLGAVVTTPEIANVMAQK-----------IQFNTFGGN-PVCSAGGLAVLRVIDKE--R---RQAHCADVGSHLL 385 (477)
Q Consensus 323 lg~G~pig~v~~~~~~~~~~~~~-----------~~~~t~~~~-~~~~aaa~a~l~~l~~~--~---~~~~~~~~~~~l~ 385 (477)
+| .-.++.++.+++.++..... ....+++.+ ....-+...+++.+.++ . ..++-++..+.++
T Consensus 200 lg-P~Gltvvivs~~al~~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly 278 (364)
T PRK12462 200 LG-PAGVTVAIIRRALLERVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLY 278 (364)
T ss_pred CC-CCceEEEEECHHHHhhccccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHH
Confidence 98 44578889999988665431 122455544 45555666788888665 3 3444455555566
Q ss_pred HHHHHHHHhCCCceeeeccceeE-EEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCCCCEEEEeCCCCCcHHHHH
Q 011777 386 GRLRTLQERHDIIGDVRGRGLMV-GMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLHGNVFRIKPPMCFTKDDAD 464 (477)
Q Consensus 386 ~~L~~l~~~~~~~~~v~g~g~~~-~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~ 464 (477)
+.+.++..-+....+..-++.|. .+.+ ++.....++.+.+.++|+....|-..-+-+|.+.=-.++.|+++
T Consensus 279 ~~id~~~~~~~~~~~~~~RS~mnv~f~~--------~~~~l~~~f~~~a~~~gl~~lkGhr~vgg~Ras~yna~~~e~v~ 350 (364)
T PRK12462 279 ATLDALNEVIDCHAHRAARSTMNVAFRF--------RQPRLDTLFKEQSTEAGFCGLSGHRSIGGIRASLYNAVSEQAVS 350 (364)
T ss_pred HHHHhCCCcccCCCChhhcCcceEEEEc--------CCHHHHHHHHHHHHHCCCccccCCcccCceEEEcCCCCCHHHHH
Confidence 55555421122222333344443 2222 23345678999999999988766332244899887888999999
Q ss_pred HHHHHHHHHHh
Q 011777 465 FLVDALDYSMS 475 (477)
Q Consensus 465 ~~l~~l~~~l~ 475 (477)
.+++-+++.-+
T Consensus 351 ~L~~fm~~f~~ 361 (364)
T PRK12462 351 RLCAFLKDFAI 361 (364)
T ss_pred HHHHHHHHHHH
Confidence 99999987654
No 357
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.15 E-value=5.6e-09 Score=102.31 Aligned_cols=195 Identities=15% Similarity=0.034 Sum_probs=132.6
Q ss_pred cccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCC
Q 011777 133 TIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIP 212 (477)
Q Consensus 133 ~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~ 212 (477)
.+..+|....+...+++..+. ..++.++||..|+..|+.... ...++||.+...|.|.......... +
T Consensus 72 sr~~nPt~~~le~~iaal~ga--~~~l~fsSGmaA~~~al~~L~--~~g~~iV~~~~~Y~gT~~~l~~~~~----~---- 139 (409)
T KOG0053|consen 72 SRSGNPTRDVLESGIAALEGA--AHALLFSSGMAAITVALLHLL--PAGDHIVATGDVYGGTLRILRKFLP----K---- 139 (409)
T ss_pred ccCCCCchHHHHHHHHHHhCC--ceEEEecccHHHHHHHHHHhc--CCCCcEEEeCCCcccHHHHHHHHHH----H----
Confidence 345578888888889888744 569999999999999998654 3567899999999876433222211 0
Q ss_pred CCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcC
Q 011777 213 QGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADE 292 (477)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DE 292 (477)
.|+..... +.+ .+++++++++ +++.+|.+|.+.|+...++. +++|+++|+++|+++|+|+
T Consensus 140 -~gie~~~v--------d~~---~~~~~~~~i~----~~t~~V~~ESPsNPll~v~D----I~~l~~la~~~g~~vvVDn 199 (409)
T KOG0053|consen 140 -FGGEGDFV--------DVD---DLKKILKAIK----ENTKAVFLESPSNPLLKVPD----IEKLARLAHKYGFLVVVDN 199 (409)
T ss_pred -hCceeeee--------chh---hHHHHHHhhc----cCceEEEEECCCCCcccccc----HHHHHHHHhhCCCEEEEeC
Confidence 12211110 000 1355666665 37999999998888776666 9999999999999999999
Q ss_pred cccCccCCCCCCccccccCCCcceee--ecccccCc--cceEEEEeC-HHHHHhhcccccccCCCCcHHHHHHHHHHHH
Q 011777 293 VQTGFGRTGSHYWGFETQGVIPDIVT--MAKGIGNG--LPLGAVVTT-PEIANVMAQKIQFNTFGGNPVCSAGGLAVLR 366 (477)
Q Consensus 293 v~~gfgr~G~~~~~~~~~gv~pDivt--~sK~lg~G--~pig~v~~~-~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~ 366 (477)
...+.. -++-...-.||++ .+|-|+|. +-.|.++.+ +++...+......-.+..+|+.+.-...-++
T Consensus 200 Tf~~p~-------~~~pL~lGADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~~~~~lg~~~~p~~~~ll~Rglk 271 (409)
T KOG0053|consen 200 TFGSPY-------NQDPLPLGADIVVHSATKYIGGHSDVIGGSVVLNSEELASRLKFLQEDLGWCEDPFDLFLLSRGLK 271 (409)
T ss_pred CcCccc-------ccChhhcCCCEEEEeeeeeecCCcceeeeEEecCcHHHHHHHHHHHHHhcCCCCHHHHHHHhcCcc
Confidence 876431 1233334478885 66999983 666888885 7887777655444455667777665554443
No 358
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.15 E-value=2.8e-08 Score=109.41 Aligned_cols=302 Identities=15% Similarity=0.131 Sum_probs=172.5
Q ss_pred CCHHHHHHHHHHHhhccccccccCC-------hHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhcc-CCceE
Q 011777 113 CHPDVLNAIFEQSKLLQHATTIYLH-------HAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLST-GNLGM 184 (477)
Q Consensus 113 ~~p~v~~Av~~~l~~~~~~~~~~~~-------~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~-~~~~i 184 (477)
.++.|.+++.+....+..++ .|.. +...++...++++++.+.+++-++.++|.+.++++...+... ++++|
T Consensus 117 ~P~~v~~~i~~~~~~~Tayt-PYqaEisQG~lqal~~~Qt~ia~LtG~~~anaSL~d~aTAaaea~~~a~~~~~g~~~~V 195 (993)
T PLN02414 117 VPPVILRNILENPGWYTQYT-PYQAEIAQGRLESLLNYQTMITDLTGLPMSNASLLDEGTAAAEAMAMCNNILKGKKKKF 195 (993)
T ss_pred CCHHHHHHHHhChHHHhhcC-CCchHHHHHHHHHHHHHHHHHHHHhCCChhhEeecCChHHHHHHHHHHHhcccCCCCEE
Confidence 45666688877665432222 2222 235678888999998877889999999999997775443322 34567
Q ss_pred EEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCC
Q 011777 185 IALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVG 264 (477)
Q Consensus 185 i~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~ 264 (477)
++.+..|...... +.... ...|+..+..+. ++.. . ..+.++++++ .+.+..
T Consensus 196 lVs~~~hP~~~~v-~~t~a--------~~~GieV~~v~~--------------~~~~-~----~~~~v~~vlv-q~P~~~ 246 (993)
T PLN02414 196 LIASNCHPQTIDV-CQTRA--------DGLGLEVVVADE--------------KDFD-Y----SSGDVCGVLV-QYPATD 246 (993)
T ss_pred EEcCccCHhHHHH-HHHhh--------hhcCCEEEEecc--------------hhhc-c----ccCceEEEEE-ecCCCC
Confidence 7766666443222 21110 012333332221 1100 0 1235666653 334557
Q ss_pred CeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCcceeeec-cccc-----CccceEEEEeCHHH
Q 011777 265 GAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMA-KGIG-----NGLPLGAVVTTPEI 338 (477)
Q Consensus 265 G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~s-K~lg-----~G~pig~v~~~~~~ 338 (477)
|.+.+ +++|.++|+++|+++++ -++. ++-.+ .-. --.+..|+++.+ ..++ ||...|++.+++++
T Consensus 247 G~v~d----v~~I~~~ah~~GaL~iV-aad~-lal~~--l~~--pge~GADi~vgsgqKwg~P~G~GGP~aGflavr~~~ 316 (993)
T PLN02414 247 GEVLD----YAEFVKNAHANGVKVVM-ATDL-LALTM--LKP--PGEWGADIVVGSAQRFGVPMGYGGPHAAFLATSQEY 316 (993)
T ss_pred eEEcC----HHHHHHHHHHcCCEEEE-EECH-HHhcC--CCC--HhhccCcEEEECCCccccCCCCCCCCeeEEEECHHH
Confidence 87777 99999999999999999 3332 22222 111 112345777542 3333 46569999999988
Q ss_pred HHhhcccc-------ccc-----------------CCCCcHHHHHHHHHHHH-----hhch---hhHHHHHHHHHHHHHH
Q 011777 339 ANVMAQKI-------QFN-----------------TFGGNPVCSAGGLAVLR-----VIDK---ERRQAHCADVGSHLLG 386 (477)
Q Consensus 339 ~~~~~~~~-------~~~-----------------t~~~~~~~~aaa~a~l~-----~l~~---~~~~~~~~~~~~~l~~ 386 (477)
...+.... .+. ....|..+..+..+++. .+.. ++..+++..+..++++
T Consensus 317 ~r~~PgriVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~ 396 (993)
T PLN02414 317 KRLMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAA 396 (993)
T ss_pred HhhCCCcccCcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHH
Confidence 76554210 000 01223322222222222 2122 3445677778888888
Q ss_pred HHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHHH
Q 011777 387 RLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADFL 466 (477)
Q Consensus 387 ~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~ 466 (477)
+|.++ .+..... +-.+ .+.+.+ + ...++.+.|.++||.+.... .+.+|+++...+|++|||.+
T Consensus 397 ~L~~~--G~~~~~~-~~f~-~vt~~~--------~---~~~~v~~~L~~~gI~l~~~~--~~~lrvs~~e~~T~edId~L 459 (993)
T PLN02414 397 GLKKL--GFQVQSL-PFFD-TVKVKC--------S---DADAIADAAAKVGINLRVVD--ANTVTVSFDETTTLEDVDKL 459 (993)
T ss_pred HHhhc--CCccCCC-CCcC-eEEEec--------C---CHHHHHHHHHHCCCeeEEec--CCeEEEEeeccCCHHHHHHH
Confidence 88653 1222221 1111 122222 1 12578899999999887543 56899999999999999999
Q ss_pred HHHHH
Q 011777 467 VDALD 471 (477)
Q Consensus 467 l~~l~ 471 (477)
++.|.
T Consensus 460 ~~~l~ 464 (993)
T PLN02414 460 FKVFA 464 (993)
T ss_pred HHHHc
Confidence 99996
No 359
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.05 E-value=7.4e-08 Score=106.52 Aligned_cols=275 Identities=14% Similarity=0.124 Sum_probs=160.0
Q ss_pred HHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccC--CceEEEEccCccCCcccccccccCCCCCCCCCCCCee
Q 011777 140 IADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTG--NLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIH 217 (477)
Q Consensus 140 ~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~--~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~ 217 (477)
..++...++++++.+..++-+..++|.+.++++...+ +.+ +++|++.+..|.... .++.... ...|+.
T Consensus 123 l~~~Qt~la~LtG~~~anaSl~d~aTAa~ea~~~a~~-~~~~~~~~vlv~~~~hP~~~-~v~~t~a--------~~~G~e 192 (954)
T PRK05367 123 LLNFQTMVADLTGLEIANASLLDEATAAAEAMALAKR-VSKSKSNRFFVDDDVHPQTL-DVLRTRA--------EPLGIE 192 (954)
T ss_pred HHHHHHHHHHHHCCChhhccccccHHHHHHHHHHhhh-hccCCCCEEEEcCccCHHHH-HHHHHHH--------HhCCCE
Confidence 4577888899987777788999999999996665443 443 367777666664332 2221110 012444
Q ss_pred eecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCc
Q 011777 218 HVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGF 297 (477)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gf 297 (477)
.+..+.. +++ + .++++++++. +.+..|.+.+ +++|.++|+++|+++++|-.+..+
T Consensus 193 v~~~~~~-------------~d~----~---~~~~~~vlvq-~p~~~G~i~d----~~~i~~~ah~~Gal~~vda~~~Al 247 (954)
T PRK05367 193 VVVGDAA-------------KAL----D---HDDVFGVLLQ-YPGTSGEVRD----YTALIAAAHARGALVAVAADLLAL 247 (954)
T ss_pred EEEecCc-------------cCC----C---cccEEEEEEe-cCCCCeeecc----HHHHHHHHHHcCCEEEEEehhhhc
Confidence 3332211 111 1 1356666543 3466787776 999999999999999999865322
Q ss_pred cCCCCCCccccccCCCcceeeec--cc---cc-CccceEEEEeCHHHHHhhcccccc------c----C-----------
Q 011777 298 GRTGSHYWGFETQGVIPDIVTMA--KG---IG-NGLPLGAVVTTPEIANVMAQKIQF------N----T----------- 350 (477)
Q Consensus 298 gr~G~~~~~~~~~gv~pDivt~s--K~---lg-~G~pig~v~~~~~~~~~~~~~~~~------~----t----------- 350 (477)
+. . . .--....|+++.+ |. +| ||.-.|++.+++++...+....-+ + .
T Consensus 248 ~~-l-~----~pge~GaDi~vgs~qkfg~P~g~GGP~aGflavr~~~~r~lpgrivG~s~d~~g~~~~~lalqtReqhiR 321 (954)
T PRK05367 248 TL-L-T----PPGEMGADIAVGSAQRFGVPMGFGGPHAAYFAVRDAYKRSMPGRIVGVSVDAAGNPALRLALQTREQHIR 321 (954)
T ss_pred cC-C-C----ChhhcCCCEEEeeCcccCCCCCCCCCCEEEEEECHHHHhhCCCCeeeeecccCCCccccccccccccccc
Confidence 21 1 0 1112345777543 43 22 345689999999988776532111 0 0
Q ss_pred C---CCcH---HHHHHHHHH--HHhhchh---hHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCC
Q 011777 351 F---GGNP---VCSAGGLAV--LRVIDKE---RRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEK 419 (477)
Q Consensus 351 ~---~~~~---~~~aaa~a~--l~~l~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~ 419 (477)
+ ..|. .+..+..+. +..+..+ +..+++..+..+++++|.+. .+..... ..+-.+.+..
T Consensus 322 rekaTsNict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~--G~~~~~~----~~f~~~~~~~----- 390 (954)
T PRK05367 322 REKATSNICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRAL--GLEVVHD----SFFDTLTVEV----- 390 (954)
T ss_pred ccccccccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhc--CcccCCC----CCCCeEEEeC-----
Confidence 0 1111 111112222 2333333 34566777777888777552 2222211 1111122211
Q ss_pred CccHHHHHHHHHHHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHH
Q 011777 420 TPAKAETAVLFEKLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADFLVDALD 471 (477)
Q Consensus 420 ~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~ 471 (477)
+ ....++.+.|+++||.+.... ++.+|++|....|++||+.+++.|.
T Consensus 391 -~--~~~~~i~~~l~~~gi~~~~~~--~~~l~is~~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 391 -G--GDAAAVLARALAAGINLRRVD--DDHVGISLDETTTREDLAALLAVFG 437 (954)
T ss_pred -C--CCHHHHHHHHHHCCceecccc--CCEEEEEecccCCHHHHHHHHHHHc
Confidence 1 125679999999999985432 5689999999999999999999996
No 360
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.04 E-value=2.5e-07 Score=89.48 Aligned_cols=324 Identities=15% Similarity=0.121 Sum_probs=179.7
Q ss_pred CCCHHHHHHHHHHHhh-ccccc--ccc-----CChHHHHH-HHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCc
Q 011777 112 HCHPDVLNAIFEQSKL-LQHAT--TIY-----LHHAIADF-AEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNL 182 (477)
Q Consensus 112 h~~p~v~~Av~~~l~~-~~~~~--~~~-----~~~~~~~l-~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~ 182 (477)
+..|.|.+|+-..+.+ +.... -+| .-+..+.| .++..++++.+.-+| =-.||+.||.+++..... +++
T Consensus 37 ~~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFga~~anV-QPhSGs~AN~av~~All~--pGD 113 (413)
T COG0112 37 FTSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGAEYANV-QPHSGSQANQAVYLALLQ--PGD 113 (413)
T ss_pred cCCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhCCCcccc-CCCCchHHHHHHHHHHcC--CCC
Confidence 3679999998776653 22111 111 11223344 344455565544444 346899999988875543 677
Q ss_pred eEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCC
Q 011777 183 GMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQG 262 (477)
Q Consensus 183 ~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~ 262 (477)
+|+..+-..-|+..-....+ ....-+..++++.... +..-..|+++++... .+++.||+=
T Consensus 114 timgm~l~~GGHltHg~~v~--------~sG~~~~~v~Y~vd~e-----t~~IDyD~~~k~a~e---~kPK~ii~G---- 173 (413)
T COG0112 114 TIMGLDLSHGGHLTHGSPVN--------FSGKLFNVVSYGVDPE-----TGLIDYDEVEKLAKE---VKPKLIIAG---- 173 (413)
T ss_pred eEecccCCCCCcccCCCCCC--------ccceeEEeEecccccc-----cCccCHHHHHHHHHH---hCCCEEEEC----
Confidence 88776544433322111111 1111122333222111 011114777777763 355666652
Q ss_pred CCCeeeCCchhHHHHHHHHHHhCcEEEEcCccc-CccCCCCCCccccccCCCcceeeec--ccccCccceEEEEeCH-HH
Q 011777 263 VGGAVELAPGYLKLVYDIVRKAGGVCIADEVQT-GFGRTGSHYWGFETQGVIPDIVTMA--KGIGNGLPLGAVVTTP-EI 338 (477)
Q Consensus 263 ~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~-gfgr~G~~~~~~~~~gv~pDivt~s--K~lg~G~pig~v~~~~-~~ 338 (477)
+..-+..-.+++++++|++.|++|.+|-++- |+--.|...-.+. ..|++|-+ |.|-| .|-|.+++++ ++
T Consensus 174 --~SaY~r~id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~----~AdvVTtTTHKTlrG-PrGG~Il~~~eel 246 (413)
T COG0112 174 --GSAYSRPIDFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLP----HADVVTTTTHKTLRG-PRGGIILTNDEEL 246 (413)
T ss_pred --ccccccccCHHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCCC----ccceEeCCcccCCCC-CCceEEEeccHHH
Confidence 2233333448999999999999999998753 4433341111111 25788644 99875 3558888884 88
Q ss_pred HHhhcccccccCCCCcHHHHHHHH-HHHHhhch---hhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEee
Q 011777 339 ANVMAQKIQFNTFGGNPVCSAGGL-AVLRVIDK---ERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVT 414 (477)
Q Consensus 339 ~~~~~~~~~~~t~~~~~~~~aaa~-a~l~~l~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~ 414 (477)
.+.+.+....++.+++.+-..|+. .++....+ ++..+++.++.+.|.+.|.+. .+.++..- -...++.+++..
T Consensus 247 ~kkin~aVFPg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~--G~~vvsGg-TdnHl~lVDl~~ 323 (413)
T COG0112 247 AKKINSAVFPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKER--GFKVVSGG-TDNHLVLVDLRS 323 (413)
T ss_pred HHHhhhhcCCccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHc--CCeEecCC-ccceEEEEEccc
Confidence 888877655666666544444443 33443333 345677777777787777663 23333211 123455666652
Q ss_pred CCCCCCccHHHHHHHHHHHHHcCceeeccC--------CCCCEEEEeCCCCC----cHHHHHHHHHHHHHHHh
Q 011777 415 DRKEKTPAKAETAVLFEKLRELGVLVGKGG--------LHGNVFRIKPPMCF----TKDDADFLVDALDYSMS 475 (477)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~--------~~~~~iRi~p~~~~----t~e~i~~~l~~l~~~l~ 475 (477)
.. .........|.+-||.+.... ...+-|||..|..+ .++|+++..+.+.+++.
T Consensus 324 ~~-------~~Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~ 389 (413)
T COG0112 324 KG-------LTGKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLD 389 (413)
T ss_pred CC-------CCHHHHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHHHHHHHHHHHHh
Confidence 11 113344556666788886441 11245898766554 56788888888888775
No 361
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.03 E-value=8.3e-08 Score=98.20 Aligned_cols=252 Identities=17% Similarity=0.094 Sum_probs=144.8
Q ss_pred CCHHHHHHHHHHHhhcccccccc--CChHHHHHHHHHHhhCCC-CCCEEEEeCChHHHHHHHHHHHHhccC----C----
Q 011777 113 CHPDVLNAIFEQSKLLQHATTIY--LHHAIADFAEALASKMPG-NLKVVYFVNSGTEANELAMLMARLSTG----N---- 181 (477)
Q Consensus 113 ~~p~v~~Av~~~l~~~~~~~~~~--~~~~~~~l~~~La~~~~~-~~~~v~~~~sGseA~~~Al~~ar~~~~----~---- 181 (477)
.++...+++...+.+.......+ ......++...+++++.. ....-.||+||||||..|+.++|.... +
T Consensus 74 ~~~~a~~~~~~~~~~nl~d~~~~p~a~~~E~~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~ 153 (460)
T COG0076 74 VPPVAAELLVSALNKNLGDPDESPAAAELEERVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRALAESGK 153 (460)
T ss_pred CHHHHHHHHHHHHhhcCCCcccChhHHHHHHHHHHHHHHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccc
Confidence 56777777777766532211122 234455677777777754 223578999999999999999976431 1
Q ss_pred ---ceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCee-EEEe
Q 011777 182 ---LGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVA-GFIA 257 (477)
Q Consensus 182 ---~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a-~vi~ 257 (477)
...|++....|-...-+....+. +...++.... +...+ .++|++.|+.. .+. +|+.
T Consensus 154 ~~~~P~ii~s~~aH~s~~Kaa~~lG~----------~~~~v~~~~~-~~~id------~~~l~~~i~~~---t~~g~vV~ 213 (460)
T COG0076 154 PGGKPNIVCSETAHFSFEKAARYLGL----------GLRRVPTVPT-DYRID------VDALEEAIDEN---TIGGVVVG 213 (460)
T ss_pred cCCCCeEEecCcchhHHHHHHHHhCC----------CceeEEeccC-ccccC------HHHHHHHHHhh---ccCceEEE
Confidence 11345455566544333333221 1112211110 11122 58899988732 222 2555
Q ss_pred cccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCC-CCC--CccccccCC-Ccceeeec--ccccCccceEE
Q 011777 258 ETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRT-GSH--YWGFETQGV-IPDIVTMA--KGIGNGLPLGA 331 (477)
Q Consensus 258 epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~-G~~--~~~~~~~gv-~pDivt~s--K~lg~G~pig~ 331 (477)
..-....|.+-+ +++|.++|+++|+++++|.++.||-.. ... .|. +++ ..|.++++ |-....++.|+
T Consensus 214 ~aGtT~~G~iDd----i~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~~---f~l~~vdSIt~d~HK~g~aP~~~G~ 286 (460)
T COG0076 214 TAGTTDTGSIDD----IEELADIAEEYGIWLHVDAAFGGFLLPFLEPDGRWD---FGLEGVDSITVDGHKYGLAPIGCGV 286 (460)
T ss_pred EecCCCCCccCC----HHHHHHHHHHcCCcEEEEccccceeecccCccchhh---cCCCCceEEEECcccccCCCCCceE
Confidence 444455566666 999999999999999999999987421 000 111 233 34666654 77766788899
Q ss_pred EEeCHH--HHHhhcccc---cc-----cCC--CCcHHHHHHHHHHHHhhchhh---HHHHHHHHHHHHHHHHHHH
Q 011777 332 VVTTPE--IANVMAQKI---QF-----NTF--GGNPVCSAGGLAVLRVIDKER---RQAHCADVGSHLLGRLRTL 391 (477)
Q Consensus 332 v~~~~~--~~~~~~~~~---~~-----~t~--~~~~~~~aaa~a~l~~l~~~~---~~~~~~~~~~~l~~~L~~l 391 (477)
++.+.+ +.+.+.... .+ .|. +.+.-..++..+.++.+..++ +.++..++.+++.++|++.
T Consensus 287 il~rd~e~l~~~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~ 361 (460)
T COG0076 287 VLFRDEEALRRILIFADYYLPGGGIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKL 361 (460)
T ss_pred EEEECHHHhhhhhhcccccCCCCCcCceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhC
Confidence 998765 444333110 10 011 122334555667777775554 4455557777777777665
No 362
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=98.99 E-value=2.3e-07 Score=90.48 Aligned_cols=297 Identities=18% Similarity=0.207 Sum_probs=185.7
Q ss_pred ChHHHHHHHHHHhhCCCCCCEEEE-eCChHHHHHHHHHHHHhcc-----CCceEEEEccCccCCcccccccccCCCCCCC
Q 011777 137 HHAIADFAEALASKMPGNLKVVYF-VNSGTEANELAMLMARLST-----GNLGMIALRNAYHGGSSGTIGLTALNTWKYP 210 (477)
Q Consensus 137 ~~~~~~l~~~La~~~~~~~~~v~~-~~sGseA~~~Al~~ar~~~-----~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~ 210 (477)
.+...+|.++|++.. +++.|.+ -|+|++.=.+.+.+.|+|. +..+++....+-||.-.+..++.
T Consensus 108 l~li~~Lq~~L~~IT--G~DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPASAam~-------- 177 (496)
T COG1003 108 LELIYELQEWLKEIT--GMDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPASAAMA-------- 177 (496)
T ss_pred HHHHHHHHHHHHHhc--CCceeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCChhhHhhc--------
Confidence 355678999999988 4555544 5689999888888888873 23345555568899866555543
Q ss_pred CCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEE
Q 011777 211 IPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIA 290 (477)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~ 290 (477)
|+..+.++....+..+ ++||++.+. +++|++++... ++-|+. ++-+++|.++.+++|..|..
T Consensus 178 ----G~~VV~V~~~~~G~VD------lddLk~k~~----~~~AalMiTnP-sT~GvF---E~~I~ei~~ivH~~Gg~vY~ 239 (496)
T COG1003 178 ----GFKVVVVKCDENGNVD------LDDLRAKAE----DNLAALMITNP-STLGVF---EEDIREICEIVHEAGGQVYY 239 (496)
T ss_pred ----CceEEEEecCCCCCcc------HHHHHHHhc----cceeEEEeccC-cccccc---hhhHHHHHHHHHHcCCEEEe
Confidence 4555555444444443 688888776 67887777543 344543 34488999999999999999
Q ss_pred cCc----ccCccCCCCCCccccccCCCccee------eecccccC-ccceEEEEeCHHHHHhhcc----cc---------
Q 011777 291 DEV----QTGFGRTGSHYWGFETQGVIPDIV------TMAKGIGN-GLPLGAVVTTPEIANVMAQ----KI--------- 346 (477)
Q Consensus 291 DEv----~~gfgr~G~~~~~~~~~gv~pDiv------t~sK~lg~-G~pig~v~~~~~~~~~~~~----~~--------- 346 (477)
|-+ +-|..|.|. + -.|++ ||+=.-|| |...|-|.++.++...+.. ..
T Consensus 240 DGANlNA~vG~~rPGd--~-------G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~y~~~~~ 310 (496)
T COG1003 240 DGANLNAIVGLARPGD--M-------GFDVVHLNLHKTFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGEYRLDYD 310 (496)
T ss_pred cCcchhhhhccccccc--c-------ccceEEeecccccccCCCCCCCCCCceehHhhccccCCCCcccCCCccccccCC
Confidence 975 445556661 2 23444 34444454 5778888888887766543 00
Q ss_pred ------cccCCCCcHHHHHHHHHHHHhhchhhHH---HHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeC-C
Q 011777 347 ------QFNTFGGNPVCSAGGLAVLRVIDKERRQ---AHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTD-R 416 (477)
Q Consensus 347 ------~~~t~~~~~~~~aaa~a~l~~l~~~~~~---~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~-~ 416 (477)
....|.||.....-+.+.+..+..+.+. +...-+..|+..+|+. .|+++... .. .+.=+++-+ +
T Consensus 311 ~~~s~g~~~a~~Gs~~il~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~---~y~~~y~~--~~-~~~HE~ild~r 384 (496)
T COG1003 311 GKKSIGVSAAPYGSASILPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKG---YYPVPYTG--EN-RVAHECILDAR 384 (496)
T ss_pred CCccceeeccccCcchHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhh---cCccccCC--CC-cceeEEEeech
Confidence 1123445555555666777766655442 3444467788887765 34433221 11 122222211 1
Q ss_pred CCCCccHHHHHHHHHHHHHcCceeeccCC---CCCEEEEeCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 417 KEKTPAKAETAVLFEKLRELGVLVGKGGL---HGNVFRIKPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 417 ~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~---~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
..+...+....+++++|++.|+.-.+... -.+.+.|-|.=.-+++++|+++++|.++.++
T Consensus 385 ~l~~~~Gv~~~DvAKrLlD~GfHaPT~~FPliV~~tLMIEPTEsEsk~eLDrf~dami~I~~E 447 (496)
T COG1003 385 PLKKETGVRALDVAKRLLDYGFHAPTMYFPLIVAGTLMIEPTESESKEELDRFIDAMIAIREE 447 (496)
T ss_pred HhHhhcCCcHHHHHHHHHhcCCCCCcccCccccccceeecCCCCCCHHHHHHHHHHHHHHHHH
Confidence 11122234567899999999997644311 1367888888888999999999999877643
No 363
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=98.87 E-value=8e-07 Score=89.20 Aligned_cols=229 Identities=19% Similarity=0.195 Sum_probs=125.0
Q ss_pred HHHHHHHHHHhhCCCC-------CCEEEEeCChHHHHHHHHHHHHhcc-------C----CceEEEEccCccCCcccccc
Q 011777 139 AIADFAEALASKMPGN-------LKVVYFVNSGTEANELAMLMARLST-------G----NLGMIALRNAYHGGSSGTIG 200 (477)
Q Consensus 139 ~~~~l~~~La~~~~~~-------~~~v~~~~sGseA~~~Al~~ar~~~-------~----~~~ii~~~~~yhG~~~~~~~ 200 (477)
...++.++|+++++.+ ...-+||+||||||..|+..||... + .+.+++....-|-...-+..
T Consensus 80 ~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~ 159 (373)
T PF00282_consen 80 IEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKAAR 159 (373)
T ss_dssp HHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHHHH
T ss_pred chHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHhcc
Confidence 3456677777777543 1357899999999999999997642 1 22355555545644333333
Q ss_pred cccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhcc-CCCC-eeEEEecccCCCCCeeeCCchhHHHHH
Q 011777 201 LTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFG-TSGK-VAGFIAETIQGVGGAVELAPGYLKLVY 278 (477)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~-~~~~-~a~vi~epi~~~~G~~~~~~~~l~~l~ 278 (477)
..+. ++..++... .+.++ .++|++.|+.. ..+. +.+|+..--....|.+-+ +++|.
T Consensus 160 ~lGl----------g~~~I~~~~--~~~md------~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~----l~~i~ 217 (373)
T PF00282_consen 160 ILGL----------GVRKIPTDE--DGRMD------IEALEKALEKDIANGKTPFAVVATAGTTNTGAIDP----LEEIA 217 (373)
T ss_dssp HTTS----------EEEEE-BBT--TSSB-------HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-S----HHHHH
T ss_pred eeee----------EEEEecCCc--chhhh------HHHhhhhhcccccccccceeeeccCCCcccccccC----HHHHh
Confidence 3221 233333222 12222 57787777632 1223 335555544445677766 99999
Q ss_pred HHHHHhCcEEEEcCcccCccCCCCCCccccccCC-Ccceeee--cccccCccceEEEEeCHH--HHHhhcc----cc---
Q 011777 279 DIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGV-IPDIVTM--AKGIGNGLPLGAVVTTPE--IANVMAQ----KI--- 346 (477)
Q Consensus 279 ~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv-~pDivt~--sK~lg~G~pig~v~~~~~--~~~~~~~----~~--- 346 (477)
++|+++++++++|.++.|...-- ..+-.-..++ ..|-+++ -|.++..++.|+++.+.+ +...+.. ..
T Consensus 218 ~i~~~~~~wlHVDaA~gg~~~~~-~~~~~~~~gi~~adSit~d~HK~l~~P~~~~~~l~r~~~~l~~~~~~~~~Yl~~~~ 296 (373)
T PF00282_consen 218 DICEKYNIWLHVDAAYGGSALLS-PEYRHLLFGIERADSITIDPHKWLGVPYGCGVLLVRDKSDLRDAFSINADYLGNDD 296 (373)
T ss_dssp HHHHHCT-EEEEEETTGGGGGGH-CTTGGGGTTGGGESEEEEETTTTTS-SSS-EEEEESSGGGHHGGGEEEETCTT-S-
T ss_pred hhccccceeeeeccccccccccc-ccccccccccccccccccchhhhhcCCccceeEEeecccchHHHhccChhhhcccc
Confidence 99999999999999998732111 1111112233 2466664 499988899999988764 3333311 01
Q ss_pred ---------cccCCC-CcHHHHHHHHHHHHhhchhhHH---HHHHHHHHHHHHHHHH
Q 011777 347 ---------QFNTFG-GNPVCSAGGLAVLRVIDKERRQ---AHCADVGSHLLGRLRT 390 (477)
Q Consensus 347 ---------~~~t~~-~~~~~~aaa~a~l~~l~~~~~~---~~~~~~~~~l~~~L~~ 390 (477)
...|+. +-.........+|+.+..+.+. ++..++.+++.++|++
T Consensus 297 ~~~~~~~~~~~~tl~~SR~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~ 353 (373)
T PF00282_consen 297 RESDESYDYGDYTLQGSRRFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRK 353 (373)
T ss_dssp SSS-GGGCEEEGSSSSSGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cccccccccccccccccccchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 001222 2245555566677766555544 4444455566555544
No 364
>PRK15029 arginine decarboxylase; Provisional
Probab=98.86 E-value=1e-06 Score=94.66 Aligned_cols=311 Identities=14% Similarity=0.081 Sum_probs=161.4
Q ss_pred HHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccC-CCCCCCCC-CCCe
Q 011777 139 AIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTAL-NTWKYPIP-QGEI 216 (477)
Q Consensus 139 ~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~-~~~~~~~~-~~~~ 216 (477)
...+..+..++.++.+ ...|.+||.|.+|.+++..+. +++++|++ ....|-+...++.+++. +.|-.+.. ..|+
T Consensus 206 ~I~eAq~~aA~~fgA~-~t~FlvNGST~gn~a~i~a~~--~~gd~Vlv-~RN~HKSv~~al~L~ga~Pvyl~P~~~~~Gi 281 (755)
T PRK15029 206 AFGESEKYAARVFGAD-RSWSVVVGTSGSNRTIMQACM--TDNDVVVV-DRNCHKSIEQGLILTGAKPVYMVPSRNRYGI 281 (755)
T ss_pred HHHHHHHHHHHHhCCC-cEEEEeCChhHHHHHHHHHhc--CCCCEEEe-ecccHHHHHHHHHHcCCeEEEecccccccCC
Confidence 3455556666667553 567777888888886666443 34555555 45556655555555543 33322111 1111
Q ss_pred eeecCCCCcCCCCCCCHHHHHHHHHHHHhccCC------CC-eeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEE
Q 011777 217 HHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTS------GK-VAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCI 289 (477)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~------~~-~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI 289 (477)
.... +. ..+. .+.+++.|+.... .+ .++|+..|.. -|++.. +++|.++|+++|+.|+
T Consensus 282 ~~~i---~~-~~~~------~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY--~Gv~~d----i~~I~~~~h~~~~~ll 345 (755)
T PRK15029 282 IGPI---YP-QEMQ------PETLQKKISESPLTKDKAGQKPSYCVVTNCTY--DGVCYN----AKEAQDLLEKTSDRLH 345 (755)
T ss_pred ccCC---Cc-cccC------HHHHHHHHHhCchhhhccccCceEEEEECCCC--cceeeC----HHHHHHHHHhcCCeEE
Confidence 1100 00 0011 3677777753210 11 2566666633 355555 8999999999999999
Q ss_pred EcCcccCccCCCCCCccc-ccc-----C-CCcc-eeeec--ccccCccce-EEEEeCHH--HH--Hhhccc-ccccCCCC
Q 011777 290 ADEVQTGFGRTGSHYWGF-ETQ-----G-VIPD-IVTMA--KGIGNGLPL-GAVVTTPE--IA--NVMAQK-IQFNTFGG 353 (477)
Q Consensus 290 ~DEv~~gfgr~G~~~~~~-~~~-----g-v~pD-ivt~s--K~lg~G~pi-g~v~~~~~--~~--~~~~~~-~~~~t~~~ 353 (477)
+||++.+.-.-. ..+.- ... . ..+| +++-| |.+++ +.- +++-.+.. .+ +.+... ....|-+.
T Consensus 346 vDEAhGah~~F~-~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~a-lTQaS~LHv~~~~~~id~~r~~~~l~~~qSTSP 423 (755)
T PRK15029 346 FDEAWYGYARFN-PIYADHYAMRGEPGDHNGPTVFATHSTHKLLNA-LSQASYIHVREGRGAINFSRFNQAYMMHATTSP 423 (755)
T ss_pred EECccccccccC-ccccccccccccccccCCCceEEEEchhhcccc-hhhhhhheeCCCccccCHHHHHHHHHHHcCCCc
Confidence 999987542222 12221 111 1 3477 66544 87764 222 33333211 11 122211 12234455
Q ss_pred cHHHHHHHHHHHHhhch---hhHHHHHHHHHHHHHHHHHHHHHhCC----C---------c-------------------
Q 011777 354 NPVCSAGGLAVLRVIDK---ERRQAHCADVGSHLLGRLRTLQERHD----I---------I------------------- 398 (477)
Q Consensus 354 ~~~~~aaa~a~l~~l~~---~~~~~~~~~~~~~l~~~L~~l~~~~~----~---------~------------------- 398 (477)
+.+-++..-.+.+.++. +++.++..+....+++.++++..++. . +
T Consensus 424 SY~LmASLD~ar~~m~~~~G~~l~~~~i~~~~~~r~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 503 (755)
T PRK15029 424 LYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLL 503 (755)
T ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhccccccccccccccccCccccccccccccccccccchhhh
Confidence 66666655555555543 35667777788888888876642100 0 0
Q ss_pred -----eeeecc-----c-------e-e---EEEEEeeCC--CCC--CccHHHHHHHHHHHHHcCceeeccCCCCCEEEEe
Q 011777 399 -----GDVRGR-----G-------L-M---VGMELVTDR--KEK--TPAKAETAVLFEKLRELGVLVGKGGLHGNVFRIK 453 (477)
Q Consensus 399 -----~~v~g~-----g-------~-~---~~i~~~~~~--~~~--~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~ 453 (477)
..+-+. | . + .-+.+.... .+. ...+.-+..+.+.|.++||.+...+ .+.+-+.
T Consensus 504 ~~~~~~~~~~~~~~~~g~~~~~~~~~~lDp~Klti~~~~~g~sG~~~~~gip~~~l~~~L~~~gI~~E~~~--~~~vL~l 581 (755)
T PRK15029 504 TTVQDCWVMHPGESWHGFKDLPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRHGIVPTRTT--DFQIMFL 581 (755)
T ss_pred ccccceeeecccccccCcccccccccccCCceEEEEcCCCCCCCcccccCCcHHHHHHHHHHcCCEEEecC--CCeEEEE
Confidence 000000 0 0 0 000010000 000 0011123467888888899998765 3445566
Q ss_pred CCCCCcHHHHHHHHHHHHHH
Q 011777 454 PPMCFTKDDADFLVDALDYS 473 (477)
Q Consensus 454 p~~~~t~e~i~~~l~~l~~~ 473 (477)
.+...|++++++++++|.+.
T Consensus 582 ~s~g~t~~~~~~L~~aL~~~ 601 (755)
T PRK15029 582 FSMGVTRGKWGTLVNTLCSF 601 (755)
T ss_pred eCCCCCHHHHHHHHHHHHHH
Confidence 67889999999999998865
No 365
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=98.82 E-value=2.3e-07 Score=92.57 Aligned_cols=273 Identities=17% Similarity=0.128 Sum_probs=140.1
Q ss_pred eCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCC-cCCCCCCCHHHHHHH
Q 011777 161 VNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDP-YHGSFGSDAARYAQD 239 (477)
Q Consensus 161 ~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 239 (477)
..||+.||.+++..... ++++|+.++...-|+......... .+.......+..++++.. .....+ .++
T Consensus 92 p~SGs~An~av~~aLl~--pGD~Im~l~l~~GGHlshg~~~~~---~~~~~~~~~~~~~~y~~d~~~~~ID------~d~ 160 (399)
T PF00464_consen 92 PHSGSQANLAVYMALLK--PGDTIMGLSLPHGGHLSHGSSVNF---KKISASGLYFESVPYPVDPDTGLID------YDE 160 (399)
T ss_dssp -SSHHHHHHHHHHHHT---TT-EEEEEEGGGT--GGGT-TTSH---SBSSHHHHHSEEEEEEB-TTTSSB-------HHH
T ss_pred cCCchHHHHHHHHHHHh--hcCcEEecChhhcccccccccccc---cccccccceEEEEeeeeecCCCeEC------HHH
Confidence 45999999888775543 678898887544333211111000 000000001222222211 111111 477
Q ss_pred HHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCccc-CccCCCCCCccccccCCCcceee
Q 011777 240 LQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQT-GFGRTGSHYWGFETQGVIPDIVT 318 (477)
Q Consensus 240 le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~-gfgr~G~~~~~~~~~gv~pDivt 318 (477)
++++++. .+++.||+....- +-+-.+++++++|++.|++|++|-.|. |+--.| .+.-. +. ..|++|
T Consensus 161 l~~~a~~---~kPklIi~G~S~y------~~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g--~~~~P-~~-~ADvvt 227 (399)
T PF00464_consen 161 LEKLAKE---HKPKLIICGASSY------PRPIDFKRFREIADEVGAYLMADISHIAGLIAGG--LFPNP-FP-YADVVT 227 (399)
T ss_dssp HHHHHHH---H--SEEEEE-SST------SS---HHHHHHHHHHTT-EEEEE-TTTHHHHHTT--SS--G-CC-TSSEEE
T ss_pred HHHHHhh---cCCCEEEECchhc------cCccCHHHHHHHHHhcCcEEEecccccccceehh--eecCc-cc-cceEEE
Confidence 8777763 3567888876432 222236999999999999999998865 442233 22111 12 268887
Q ss_pred ec--ccccCccceEEEEeC--------------HHHHHhhcccccccCCCCcHHHHHHHH-HHHHhhch---hhHHHHHH
Q 011777 319 MA--KGIGNGLPLGAVVTT--------------PEIANVMAQKIQFNTFGGNPVCSAGGL-AVLRVIDK---ERRQAHCA 378 (477)
Q Consensus 319 ~s--K~lg~G~pig~v~~~--------------~~~~~~~~~~~~~~t~~~~~~~~aaa~-a~l~~l~~---~~~~~~~~ 378 (477)
+| |.|.| .+-|.++++ +++.+.+......+..+++.....|++ .++..... .++.+++.
T Consensus 228 ~sThKtl~G-PrggiI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv 306 (399)
T PF00464_consen 228 GSTHKTLRG-PRGGIILTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKEALSPEFKEYAKQVV 306 (399)
T ss_dssp EESSGGG-S-SS-EEEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHH
T ss_pred eeccccccc-cCceEEEEcCCccccCCcccccHHHHHHHhccccCCCcccCcchhHHHHHHHHHhcccCHHHHHHHHHHH
Confidence 66 99975 355888999 788888876544454454444444443 34444322 35667777
Q ss_pred HHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccC-------CCCCEEE
Q 011777 379 DVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGG-------LHGNVFR 451 (477)
Q Consensus 379 ~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~-------~~~~~iR 451 (477)
++.+.|.+.|.+. .+.++..- -...++++++... ........+.|.+.||.+.... ...+-||
T Consensus 307 ~NAk~La~~L~~~--G~~v~~gg-Td~H~vlvd~~~~-------~~~g~~a~~~Le~~gI~vnkn~iP~d~~~~~~sGlR 376 (399)
T PF00464_consen 307 KNAKALAEALQER--GFKVVTGG-TDNHQVLVDLRSF-------GIDGKEAEKALEEAGIIVNKNTIPGDRSPFVPSGLR 376 (399)
T ss_dssp HHHHHHHHHHHHT--T-EEGGGS--SSSEEEEEGGGG-------TS-HHHHHHHHHHTTEE-EEE--TTTSTTTT-SEEE
T ss_pred HHHHHHHHHHhhC--CcEEEECC-CCCCeEEEEeccc-------ccchHHHHHHHHhcCeeecccccCCCCCCCCCCEEE
Confidence 7888888887764 23333211 1345667776321 1124456678888999986431 1235799
Q ss_pred EeCCCCC----cHHHHHHHHH
Q 011777 452 IKPPMCF----TKDDADFLVD 468 (477)
Q Consensus 452 i~p~~~~----t~e~i~~~l~ 468 (477)
|..+..+ .++|++++.+
T Consensus 377 lGT~~lT~rG~~e~dm~~iA~ 397 (399)
T PF00464_consen 377 LGTPALTRRGMKEEDMKEIAE 397 (399)
T ss_dssp EESHHHHHTT--HHHHHHHHH
T ss_pred ECCHHHHhCCCCHHHHHHHHh
Confidence 9755433 4566655544
No 366
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=98.77 E-value=5.8e-07 Score=90.08 Aligned_cols=232 Identities=14% Similarity=0.106 Sum_probs=124.9
Q ss_pred ChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccC-CCCCCCCC-CC
Q 011777 137 HHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTAL-NTWKYPIP-QG 214 (477)
Q Consensus 137 ~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~-~~~~~~~~-~~ 214 (477)
.....+..+..++.++.+ +..|.+||.|.+|.+++..+. .++++|++-+ ..|-+...++.+++. +.|..+.. ..
T Consensus 65 ~G~I~eAe~~aA~~fGAd-~t~flvnGsT~g~~a~i~a~~--~~gd~VLv~R-N~HkSv~~alil~ga~Pvyi~p~~~~~ 140 (417)
T PF01276_consen 65 EGIIKEAEELAARAFGAD-KTFFLVNGSTSGNQAMIMALC--RPGDKVLVDR-NCHKSVYNALILSGAIPVYIPPEDNEY 140 (417)
T ss_dssp BTHHHHHHHHHHHHHTES-EEEEESSHHHHHHHHHHHHHT--TTTCEEEEET-T--HHHHHHHHHHTEEEEEEEEEE-TT
T ss_pred ccHHHHHHHHHHHhcCCC-eEEEEecCchHHHHHHHHHhc--CCCCEEEEcC-CcHHHHHHHHHHcCCeEEEecCCcccc
Confidence 345677777778888552 345666777777777776553 3556666655 445554445555432 22222110 01
Q ss_pred CeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCee---EEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEc
Q 011777 215 EIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVA---GFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIAD 291 (477)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a---~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~D 291 (477)
|+.....+. .++ .+.+++.|++. +...+ +||..|.. .|++.. +++|.++|+++++.|++|
T Consensus 141 gi~~~i~~~----~~~------~~~i~~~l~~~-p~~k~~~~vvlt~PTY--~Gv~~d----i~~I~~~~h~~~~~llvD 203 (417)
T PF01276_consen 141 GIIGGISPD----EFN------EEDIEEALKEH-PDAKAPRLVVLTSPTY--YGVCYD----IKEIAEICHKHGIPLLVD 203 (417)
T ss_dssp S-BEEB-GG----GGS------HHHHHHHHHHC-TTCHCESEEEEESS-T--TSEEE-----HHHHHHHHCCTECEEEEE
T ss_pred CCccCCChh----hhh------HHHHHHHHHhC-ccccCceEEEEeCCCC--CeEEEC----HHHHHHHhcccCCEEEEE
Confidence 221111000 011 36788888743 23333 66766633 366666 999999999999999999
Q ss_pred CcccCccCCCCCCccccccCCCcc-------eeeec--ccccCccceEEEEeCHHH---HHhhccc-ccccCCCCcHHHH
Q 011777 292 EVQTGFGRTGSHYWGFETQGVIPD-------IVTMA--KGIGNGLPLGAVVTTPEI---ANVMAQK-IQFNTFGGNPVCS 358 (477)
Q Consensus 292 Ev~~gfgr~G~~~~~~~~~gv~pD-------ivt~s--K~lg~G~pig~v~~~~~~---~~~~~~~-~~~~t~~~~~~~~ 358 (477)
|++.+.-.-. .+.-.......| +++-| |.+++=-.-+++-.+.+. .+.+... ....|-+.+.+-+
T Consensus 204 EAhGah~~F~--~lp~~a~~~gad~~~~~~~~vvqS~HKtL~altQts~lh~~~~~~v~~~~~~~~l~~~~TTSPSY~lm 281 (417)
T PF01276_consen 204 EAHGAHFGFH--PLPRSALALGADRPNDPGIIVVQSTHKTLPALTQTSMLHVKGDRIVDHERVNEALSMHQTTSPSYPLM 281 (417)
T ss_dssp -TT-TTGGCS--GGGTTCSSTTSS-CTSBEEEEEEEHHHHSSS-TT-EEEEEETCCCTTHHHHHHHHHHHS-SS--HHHH
T ss_pred ccccccccCC--CCccchhhccCccccccceeeeechhhcccccccceEEEecCCCcccHHHHHHHHHHHcCCChHHHHH
Confidence 9986431111 111122334456 77655 887641122555554331 1222221 2234556666666
Q ss_pred HHHHHHHHhhc-h--hhHHHHHHHHHHHHHHHHHHH
Q 011777 359 AGGLAVLRVID-K--ERRQAHCADVGSHLLGRLRTL 391 (477)
Q Consensus 359 aaa~a~l~~l~-~--~~~~~~~~~~~~~l~~~L~~l 391 (477)
+..-.+.+.++ . +++.++..+..+.+|++|+++
T Consensus 282 ASlD~a~~~m~~~~G~~l~~~~i~~a~~~R~~i~~~ 317 (417)
T PF01276_consen 282 ASLDVARAQMEEEEGRELLEEAIELAEEFRKKINRL 317 (417)
T ss_dssp HHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhc
Confidence 66666666662 2 457888888899999998663
No 367
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=98.75 E-value=5.4e-06 Score=79.05 Aligned_cols=354 Identities=19% Similarity=0.205 Sum_probs=186.5
Q ss_pred CCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHH
Q 011777 94 NGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAML 173 (477)
Q Consensus 94 dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~ 173 (477)
.+..|||+..-.++..+ ...-..||.. +.... ..+.....|++...+.++ .+.++.+.-|--|=...+.
T Consensus 44 Sedv~IDLLTDSGTgam---s~~qwaamm~----GDEAY--agsrs~~~L~~avkdifG--fq~~iPthQGRgAE~Il~~ 112 (471)
T COG3033 44 SEDVFIDLLTDSGTGAM---TDKQWAAMMR----GDEAY--AGSRSYYALADAVKDIFG--FQYTIPTHQGRGAENILIP 112 (471)
T ss_pred ccceEEEeeccCCcccc---cHHHHHHHhc----cchhh--cccccHHHHHHHHHHhcC--ceeeeeccCCccHHHHHHH
Confidence 45678999876664332 2333333322 22111 123445678888888884 5778888876655544444
Q ss_pred HHHh---ccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCC
Q 011777 174 MARL---STGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSG 250 (477)
Q Consensus 174 ~ar~---~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~ 250 (477)
..+. .-+..++++|++.|.-.+.+.....+........+ +........++.+.++ ++.|+++|+....+
T Consensus 113 i~ik~~~~~pg~~~~~~sN~~FdTTr~h~~~ng~~~~n~~~~--ea~d~~~~~pFKGd~D------~~kLe~lidevG~~ 184 (471)
T COG3033 113 ILIKKGEQEPGSKMVAFSNYHFDTTRGHIQINGATPRNVYVD--EAFDTEVKYPFKGNFD------LEKLERLIDEVGAD 184 (471)
T ss_pred HHhhhccccCCccccccccceecchhHHHHhcCCcccccccc--ccccccccCCCCCccC------HHHHHHHHHHhCcc
Confidence 3332 22446788898888877776655544221111111 1111122234455555 68899999877677
Q ss_pred CeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccC----cc--C-CCCCCcccccc----CCCcceeee
Q 011777 251 KVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTG----FG--R-TGSHYWGFETQ----GVIPDIVTM 319 (477)
Q Consensus 251 ~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g----fg--r-~G~~~~~~~~~----gv~pDivt~ 319 (477)
.+..|++.-.+|..|..+-+-.-+++++++|++||+.++.|..... |- | .|-+-|.+..- =-..|-.++
T Consensus 185 nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~m 264 (471)
T COG3033 185 NVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYADGCTM 264 (471)
T ss_pred cCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhhhhee
Confidence 7777766655555555677888899999999999999999976321 10 0 01011111100 002455556
Q ss_pred c-ccccCccce-EEEEeCHH----HHHhhccc----ccccCCCC----cHHHHHHHHHHHHhhchhhHHHHHHHHHHHHH
Q 011777 320 A-KGIGNGLPL-GAVVTTPE----IANVMAQK----IQFNTFGG----NPVCSAGGLAVLRVIDKERRQAHCADVGSHLL 385 (477)
Q Consensus 320 s-K~lg~G~pi-g~v~~~~~----~~~~~~~~----~~~~t~~~----~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~ 385 (477)
| |-=+ =.++ |++..+.+ +...++.. ....||++ ...++|++ |...-+.+++++-.+..+||.
T Consensus 265 S~KKD~-lvnmGGfl~~~D~~~fDvy~~~~~~~V~~eG~~tYGgl~GrdmealAvG---L~e~~~~~yl~~Rv~Qv~YL~ 340 (471)
T COG3033 265 SAKKDG-LVNMGGFLCFKDDSFFDVYEECRTLVVVQEGFPTYGGLAGRDMEALAVG---LREGVNFDYLAHRVAQVQYLA 340 (471)
T ss_pred eccccc-eeccccEEEecCccHHHHHHHHHhheEeeccccccCcccchhHHHHHHH---HHHhcCcHHHHHHHHHHHHHH
Confidence 5 3211 0233 56666655 44444322 11234433 33333433 333334455555556677888
Q ss_pred HHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHH-HHHHHHHHH-HHcCceeeccC-----------C----CCC
Q 011777 386 GRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKA-ETAVLFEKL-RELGVLVGKGG-----------L----HGN 448 (477)
Q Consensus 386 ~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~-~~~~~~~~l-~~~Gv~v~~~~-----------~----~~~ 448 (477)
++|.+. .-|++..+- |.-+.++-..- .+.-|... -++.+.-+| ++-||-...-| . .-+
T Consensus 341 ~~l~~~--GVpi~~paG--GHavfvda~~~-lphip~eqFpaqala~ely~e~GiRavElG~~~~~rd~ktg~q~~~~~e 415 (471)
T COG3033 341 DGLEEA--GVPIVQPAG--GHAVFVDAGKF-LPHIPAEQFPAQALACELYKEAGIRAVELGSFSLGRDPKTGKQHPPPAE 415 (471)
T ss_pred HHHHhc--CCeeEecCC--CceEEeehhhh-cCCCChhhCcHHHHHHHHHHHhCeeeeeeeceecccCCCccccCCCchh
Confidence 888775 223333333 33333332110 11112111 123333333 44465432211 0 115
Q ss_pred EEEEeCCCC-CcHHHHHHHHHHHHHHHh
Q 011777 449 VFRIKPPMC-FTKDDADFLVDALDYSMS 475 (477)
Q Consensus 449 ~iRi~p~~~-~t~e~i~~~l~~l~~~l~ 475 (477)
.+|+..|-. -|.+++|..++.++++.+
T Consensus 416 lvRltipRrtYt~~HmD~V~~a~~~l~e 443 (471)
T COG3033 416 LVRLTIPRRTYTQTHMDFVIEAFKALKE 443 (471)
T ss_pred eeeEeccccccchhHHHHHHHHHHHHHh
Confidence 789876654 588999999999988764
No 368
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=98.64 E-value=4.2e-05 Score=74.97 Aligned_cols=284 Identities=17% Similarity=0.168 Sum_probs=158.7
Q ss_pred HHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccC-CceEEEEccCccCCcccccccccCCCCCCCCCCCCeeee
Q 011777 141 ADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTG-NLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHV 219 (477)
Q Consensus 141 ~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~-~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (477)
-++...++++++-+..+.-....+|.+-|+++..-|...+ ++++++ ...-|-.+..++..... ..|+..+
T Consensus 123 fefQtlv~dLTGm~VANASm~DeaTAaAEAm~ma~r~~k~k~~~~~V-~~~vhpqt~~Vl~Tra~--------~~g~~i~ 193 (450)
T COG0403 123 FEFQTLVADLTGLDVANASMLDEATAAAEAMLMAKRVTKKKRNKFLV-PKDVHPQTLDVLRTRAE--------GLGIEIE 193 (450)
T ss_pred HHHHHHHHHHhCCCcccchhhhhHHHHHHHHHHHHHhhcCcCceEEe-cCCCCHHHHHHHHhhcc--------cCceEEE
Confidence 4566667777755444555666777777766654444332 455554 55556555554443221 1244444
Q ss_pred cCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEE--cCcccCc
Q 011777 220 VNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIA--DEVQTGF 297 (477)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~--DEv~~gf 297 (477)
..+.. ..+++++. . ..++++++++-.+..|+.... +++|.+.++++|+++|+ |=+--++
T Consensus 194 ~~~~~-----------d~~~l~~~-~---~~~~~gv~vQyP~~~G~~~~d----~~~l~~~~h~~~al~~v~aDplaL~L 254 (450)
T COG0403 194 VVDAD-----------DLDDLESA-D---DGDVFGVLVQYPNTFGIVEED----LRALIEAAHSAGALVIVAADPLALGL 254 (450)
T ss_pred Eeccc-----------hhhhhhhc-c---ccCeEEEEEecCCCCCccchh----HHHHHHHHhhcCCEEEEEechhHhhc
Confidence 32211 03555554 3 358899999977654433332 89999999999998884 4333222
Q ss_pred cC-CCCCCccccccCCCcceee-----eccccc-CccceEEEEeCHHHHHhhccc-------------------------
Q 011777 298 GR-TGSHYWGFETQGVIPDIVT-----MAKGIG-NGLPLGAVVTTPEIANVMAQK------------------------- 345 (477)
Q Consensus 298 gr-~G~~~~~~~~~gv~pDivt-----~sK~lg-~G~pig~v~~~~~~~~~~~~~------------------------- 345 (477)
-. .| ..-.||++ |+=.++ ||.-.|++.++++++..+..+
T Consensus 255 L~pPG---------e~GADIvvG~~QrfGvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHI 325 (450)
T COG0403 255 LKPPG---------EFGADIVVGSAQRFGVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHI 325 (450)
T ss_pred cCCcc---------ccCCceEEecCcccCCCcCCCCcceeeeeEhHhHhhcCCCceeeeeecCCCCchhhhhHHHHHHHH
Confidence 11 11 12346664 666666 577889999999987766432
Q ss_pred ---ccccCCCCcHHHHHHHHHHH-Hhhchh---hHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCC
Q 011777 346 ---IQFNTFGGNPVCSAGGLAVL-RVIDKE---RRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKE 418 (477)
Q Consensus 346 ---~~~~t~~~~~~~~aaa~a~l-~~l~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~ 418 (477)
...+..+.|...+|.+.+.. -.+..+ ++-++..++..++.++|++....+ .+.....|--+.+.-
T Consensus 326 RReKATSNICTnQaLlA~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~----~~~~~~fFdt~~v~~---- 397 (450)
T COG0403 326 RREKATSNICTNQALLALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGV----ELVFDHFFDTFTVRV---- 397 (450)
T ss_pred hhhccchhhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCce----EeccccceeeEEEec----
Confidence 11233344432222222222 122233 344566667777877777652111 111122222222211
Q ss_pred CCccHHHHHHHHHHHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHHH
Q 011777 419 KTPAKAETAVLFEKLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADFLVDALDYSM 474 (477)
Q Consensus 419 ~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l 474 (477)
+. .....+..+....|+-++... ...+-++..=..|+++|+.+++.+....
T Consensus 398 --~~-~~~~~l~~~~~~~G~~L~~~~--~~~~~ia~tEt~t~~~i~~l~~~~~~~~ 448 (450)
T COG0403 398 --PE-EVAEALLAAAIAGGINLRRVD--ADTVLIALTETTTKEDIDALVAAFGGVN 448 (450)
T ss_pred --ch-hHHHHHHHHHHhcCCceeeec--CCceEEEeecccCHHHHHHHHHHHhhhc
Confidence 11 235566777777888777543 3355677677789999999999987654
No 369
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=98.63 E-value=2.1e-05 Score=86.13 Aligned_cols=277 Identities=14% Similarity=0.118 Sum_probs=154.0
Q ss_pred HHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccC-CceEEEEccCccCCcccccccccCCCCCCCCCCCCeee
Q 011777 140 IADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTG-NLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHH 218 (477)
Q Consensus 140 ~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~-~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (477)
.-++...++++++-+..+.-+..++|.+-|++++..+...+ +++|++.+ +-|..+...+.... ...|+..
T Consensus 111 l~e~Qt~i~eLtGm~~aNaSl~d~atA~aEa~~~a~~~~~~~~~~vlv~~-~~hP~~~~v~~t~a--------~~~g~~v 181 (939)
T TIGR00461 111 LLNFQTVVSDLTGLPVANASLLDEGTAAAEAMALSFNVSKKKANKFFVAK-DLHPQTKSVLHTRA--------KPFGIEV 181 (939)
T ss_pred HHHHHHHHHHHHCCChhhhhccchhhHHHHHHHHHHHhhcCCCCEEEECC-CCCcchHHHHHHHH--------HhcCcEE
Confidence 45778888888865555667778888888855554333222 35666654 44433332222111 1124433
Q ss_pred ecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCcc
Q 011777 219 VVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFG 298 (477)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfg 298 (477)
+..+ .++|++.+ +++++++... +..|.+.. +++|.++++++|.++|++--...++
T Consensus 182 ~~~~--------------~~~l~~~~------~~~~v~~q~P-n~~G~ied----~~~i~~~~h~~gal~~~~ad~~al~ 236 (939)
T TIGR00461 182 IVVD--------------CSDIKKAV------DVFGCLLQYP-ATDGSILD----YKQLIDALHSHKSLVSVAADLMALT 236 (939)
T ss_pred EEEc--------------HHHHhhcC------CEEEEEEECC-CCCeEEec----HHHHHHHHHHcCCEEEEEechHHhC
Confidence 3210 24444332 4677766433 45566654 8999999999999999975443322
Q ss_pred CCCCCCccccccCCCcceee-eccccc-----CccceEEEEeCHHHHHhhccccc-------------------------
Q 011777 299 RTGSHYWGFETQGVIPDIVT-MAKGIG-----NGLPLGAVVTTPEIANVMAQKIQ------------------------- 347 (477)
Q Consensus 299 r~G~~~~~~~~~gv~pDivt-~sK~lg-----~G~pig~v~~~~~~~~~~~~~~~------------------------- 347 (477)
..- .+ . +.-.||++ .+|.|| ||.-.|++.+++++...+....-
T Consensus 237 ll~-~P---g--e~GaDi~vg~~q~fg~p~g~GGP~aG~~a~~~~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrR 310 (939)
T TIGR00461 237 LLT-PP---G--HYGADIVLGSSQRFGVPMGYGGPHAAFFAVKDEYNRKMPGRIVGVSKDALGNTALRLALQTREQHIRR 310 (939)
T ss_pred CcC-CH---H--HcCCcEEeeCCCccCCCCCCCCCceeeeeecHhhHhhCCCCceeEEecCCCCccceeecccccccccc
Confidence 110 00 1 12346663 335554 25568899999988877643210
Q ss_pred ---ccCCCCcHHHHH-HHHHHHHhhchhhH---HHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCC
Q 011777 348 ---FNTFGGNPVCSA-GGLAVLRVIDKERR---QAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKT 420 (477)
Q Consensus 348 ---~~t~~~~~~~~a-aa~a~l~~l~~~~~---~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~ 420 (477)
.+.++.+...++ .+...+..+..+.+ -+++..+..++.++|.+. .+..+.. ..|--+.+.-+.
T Consensus 311 ekAtSNICt~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~~--G~~~~~~----~fF~~~~v~~~~---- 380 (939)
T TIGR00461 311 DKATSNICTAQVLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLEND--PHELINK----TWFDTLTVKVGN---- 380 (939)
T ss_pred cccCcchhHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhC--CCcccCC----CccceEEEEeCC----
Confidence 011112222222 12222343444433 455566667777777663 2222221 112122221110
Q ss_pred ccHHHHHHHHHHHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHH
Q 011777 421 PAKAETAVLFEKLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADFLVDALD 471 (477)
Q Consensus 421 ~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~ 471 (477)
....++.+.+.++||.+.... ++.+++++.-.+|++||+.+++.|.
T Consensus 381 ---~~~~~i~~~~~~~gi~l~~~~--~~~i~~s~~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 381 ---GISSELLKAAEEFNINLRAVD--TTTVGIALDETTTKADVENLLKVFD 426 (939)
T ss_pred ---CCHHHHHHHHHHCCCeeeecC--CCEEEEEeecCCCHHHHHHHHHHhc
Confidence 125678899999999987642 5689999999999999999999984
No 370
>PRK13578 ornithine decarboxylase; Provisional
Probab=98.54 E-value=1.3e-05 Score=85.59 Aligned_cols=310 Identities=13% Similarity=0.013 Sum_probs=152.9
Q ss_pred HHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCccc-cccccc-CCCCCCCCC-CCC
Q 011777 139 AIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSG-TIGLTA-LNTWKYPIP-QGE 215 (477)
Q Consensus 139 ~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~-~~~~~~-~~~~~~~~~-~~~ 215 (477)
...+..+..++.++.+ +..|.+||.|.+|.+++..+. ++++.|++ +...|-+... ++.+++ .+.|-.+.. ..|
T Consensus 175 ~i~eAq~~AA~~fgAd-~tyFlvNGTS~gn~a~i~a~~--~~Gd~VLv-dRN~HKSv~hgaLiLsGa~PVYl~P~~n~~G 250 (720)
T PRK13578 175 AAKDAQKHAAKVFNAD-KTYFVLNGTSASNKVVTNALL--TPGDLVLF-DRNNHKSNHHGALIQAGATPVYLETARNPFG 250 (720)
T ss_pred HHHHHHHHHHHHhCCC-ceEEEeCChhHHHHHHHHHhc--CCCCEEEe-ecccHHHHHHHHHHHcCCeEEEeeccccccC
Confidence 3556666666667653 467777888888887776543 24555555 5555555443 344443 233322111 011
Q ss_pred eeeecCCCCcCCCCCCCHHH-HHHHHHHHHhccCCC------C-eeEEEecccCCCCCeeeCCchhHHHHHHH-HHHhCc
Q 011777 216 IHHVVNPDPYHGSFGSDAAR-YAQDLQDHIDFGTSG------K-VAGFIAETIQGVGGAVELAPGYLKLVYDI-VRKAGG 286 (477)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~-~~~~le~~i~~~~~~------~-~a~vi~epi~~~~G~~~~~~~~l~~l~~l-~~~~gi 286 (477)
+.. +. +... ..+.+++.|+...++ . .++||..|.. .|++.. +++|.++ |++++
T Consensus 251 i~g---------~I--~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY--dG~~yd----i~~I~~~~~h~~~- 312 (720)
T PRK13578 251 FIG---------GI--DAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTY--DGTIYN----ARQVVDKIGHLCD- 312 (720)
T ss_pred CcC---------CC--ChHHccHHHHHHHHHhcCccccccccCceEEEEECCCC--cceeec----HHHHHHHhhccCC-
Confidence 111 11 1100 025577777643111 2 3455555532 355555 8899988 78888
Q ss_pred EEEEcCcccCccCCCCCC--ccccccCCCcc----eeeec--ccccCccce-EEEEeCHHHH---------Hhhccc-cc
Q 011777 287 VCIADEVQTGFGRTGSHY--WGFETQGVIPD----IVTMA--KGIGNGLPL-GAVVTTPEIA---------NVMAQK-IQ 347 (477)
Q Consensus 287 llI~DEv~~gfgr~G~~~--~~~~~~gv~pD----ivt~s--K~lg~G~pi-g~v~~~~~~~---------~~~~~~-~~ 347 (477)
.|++||++.+.-.-...+ +.-......+| ++|=| |.+++ +-- +++-.+...+ +.+... ..
T Consensus 313 ~llvDEAhgah~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~a-lTQaS~LHvk~~~i~g~~~~v~~~r~~~al~m 391 (720)
T PRK13578 313 YILFDSAWVGYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAG-FSQTSQIHKKDNHIKGQARYCPHKRLNNAFML 391 (720)
T ss_pred cEEEeCcchhhhccCcccccCChhhhhcCCCCCCeEEEEChhhcchh-hhhHhhhhcCCcccccccccCCHHHHHHHHHH
Confidence 999999987542211010 11011233456 66544 77764 222 3332322111 112211 11
Q ss_pred ccCCCCcHHHHHHHHHHHHhhch---hhHHHHHHHHHHHHHHHHHHHHHhCCCce--eee--------------------
Q 011777 348 FNTFGGNPVCSAGGLAVLRVIDK---ERRQAHCADVGSHLLGRLRTLQERHDIIG--DVR-------------------- 402 (477)
Q Consensus 348 ~~t~~~~~~~~aaa~a~l~~l~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~--~v~-------------------- 402 (477)
..|-+.+.+-+|..-.+-..++. +.+.+...+....+|+.|.+....+.... .+.
T Consensus 392 ~qSTSPsY~LmASLDva~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~w~ 471 (720)
T PRK13578 392 HASTSPFYPLFAALDVNAKMHEGESGRRLWMECVKLGIEARKLILARCKLIRPFIPPVVDGKPWQDYPTEQIASDLRFFS 471 (720)
T ss_pred HcCCChHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhCCCeeecccccccccccccCchhhhcccccccc
Confidence 12334444444433333343432 45677777788888887733221111110 000
Q ss_pred --------ccc-----e-e---EEEEEeeCCCC-----CCccHHHHHHHHHHHHHcCceeeccCCCCCEEEEeCCCCCcH
Q 011777 403 --------GRG-----L-M---VGMELVTDRKE-----KTPAKAETAVLFEKLRELGVLVGKGGLHGNVFRIKPPMCFTK 460 (477)
Q Consensus 403 --------g~g-----~-~---~~i~~~~~~~~-----~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~ 460 (477)
|.. . + .-+.+.....+ ....+.-+..+.+.|.++||.+...+ .+.+-+.++...|+
T Consensus 472 ~~p~~~whgf~~~~~~~~~lDP~KltI~t~G~~~~~G~~~~~Gipg~~l~~~L~e~gI~~E~~d--~~~vL~l~s~g~t~ 549 (720)
T PRK13578 472 FEPGEKWHGFEGYAEDQYFVDPCKLLLTTPGIDAETGEYEDFGIPATILANYLRENGIVPEKCD--LNSILFLLTPAEDM 549 (720)
T ss_pred cccCccccccccccccccccCCceEEEEcCCcCcccccccccCccHHHHHHHHHHcCCEEEecC--CCeEEEEeCCCCCH
Confidence 000 0 0 00001000000 00011124568888888899998765 44555666788999
Q ss_pred HHHHHHHHHHHHH
Q 011777 461 DDADFLVDALDYS 473 (477)
Q Consensus 461 e~i~~~l~~l~~~ 473 (477)
++++.++++|.++
T Consensus 550 ~~~~~Lv~aL~~f 562 (720)
T PRK13578 550 AKLQQLVAMLARF 562 (720)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998765
No 371
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=98.52 E-value=3e-05 Score=77.90 Aligned_cols=275 Identities=18% Similarity=0.176 Sum_probs=132.6
Q ss_pred HHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCc--eEEEEccCccCCcccccccccCCCCCCCCCCCCe
Q 011777 139 AIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNL--GMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEI 216 (477)
Q Consensus 139 ~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~--~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~ 216 (477)
..-++...++++++-+...+-+-.+++.+-|+++...|. ++++ +|++. .+-|+.+..++...... .++
T Consensus 111 ~lfe~Qs~i~eLTGmdvaNaSlyd~atA~aEa~~ma~r~-~~~~~~~vlv~-~~~hP~~~~v~~t~a~~--------~g~ 180 (429)
T PF02347_consen 111 ALFEYQSMICELTGMDVANASLYDGATAAAEAMLMAVRA-TKRKRNKVLVP-ESLHPQTRAVLRTYAAP--------LGI 180 (429)
T ss_dssp HHHHHHHHHHHHHTSSEE-SEBSSCCHHHHHHHHHHHHH-HTT---EEEEE-TTS-CHHHHHHHHHCCH--------CCE
T ss_pred HHHHHHHHHHHhhCCCccCCCCCChhHHHHHHHHHHHHh-cccCCcEEEEc-CCcChhhHHHHHHhhhh--------CCe
Confidence 346888889998843322234555677666755544444 4433 55554 55666554443322211 244
Q ss_pred eeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCc---
Q 011777 217 HHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEV--- 293 (477)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv--- 293 (477)
..+..+..... . .+ .+++++|+++..+. -|.+.. +++|.++++++|+++|+ -+
T Consensus 181 ~iv~~~~~~~~-~--------~d---------~~~~a~v~vq~Pn~-~G~~ed----~~~i~~~~h~~gal~~~-~ad~~ 236 (429)
T PF02347_consen 181 EIVEVPLDEDG-T--------TD---------DDDTAAVMVQNPNT-FGVFED----IKEIADIAHAAGALVIV-GADPN 236 (429)
T ss_dssp EEEEE-BBTTC-S--------B----------STTEEEEEEESS-T-TSB--T----HHHHHHHHHHTT-EEEE-CGGCC
T ss_pred EEEEecccccC-C--------cc---------ccCeEEEEeecCCC-CceEee----HHHHHHHHHHcCCEEEE-ecCHH
Confidence 44443321100 0 01 36899999887654 454544 89999999999999986 22
Q ss_pred -ccCccCCCCCCccccccCCCcceee-eccccc-----CccceEEEEeCHHHHHhhccc---------------------
Q 011777 294 -QTGFGRTGSHYWGFETQGVIPDIVT-MAKGIG-----NGLPLGAVVTTPEIANVMAQK--------------------- 345 (477)
Q Consensus 294 -~~gfgr~G~~~~~~~~~gv~pDivt-~sK~lg-----~G~pig~v~~~~~~~~~~~~~--------------------- 345 (477)
..++-+.| .+ -.||++ .+|.|| ||.-.|++.++++++..+..+
T Consensus 237 aL~~l~~Pg-------e~--GADI~vg~~Q~fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtR 307 (429)
T PF02347_consen 237 ALGGLKSPG-------EY--GADIVVGEHQTFGIPMGFGGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTR 307 (429)
T ss_dssp GCCTC--GG-------GG--T-SEEEECCTTTT---CCC-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGG
T ss_pred HHhCcCChh-------hc--CccEEeeCCCCCcccCCCCCCCeeeEEEhhhhhhhCCCceecccccccccceeeeccccc
Confidence 11111111 12 347764 346665 357789999999988766432
Q ss_pred -------ccccCCCCcHHHHH-HHHHHHHhhchhh---HHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEee
Q 011777 346 -------IQFNTFGGNPVCSA-GGLAVLRVIDKER---RQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVT 414 (477)
Q Consensus 346 -------~~~~t~~~~~~~~a-aa~a~l~~l~~~~---~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~ 414 (477)
...+.++.|...++ ++...+..+..+. .-++...+..|+.++|.++ -..+ ..+. .|.-+.+..
T Consensus 308 EQHIrReKAtSNIctnqaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~-~~~~----~~~~-~f~e~v~~~ 381 (429)
T PF02347_consen 308 EQHIRREKATSNICTNQALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKI-YGLP----FDNP-FFFEFVVVF 381 (429)
T ss_dssp TCHHHGCCSTT---SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCT-TBEC----SSSS-SBSSEEEEE
T ss_pred cccccccchhhhhhhhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHh-cCcc----cCCC-Cceeeeeec
Confidence 11233444533333 3333444444443 4566666777888877664 1111 1111 122111111
Q ss_pred CCCCCCccHHHHHHHHHHHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHH
Q 011777 415 DRKEKTPAKAETAVLFEKLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADFLVDAL 470 (477)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l 470 (477)
. .. ....++.+.+...|+..... ..+.+-+++.=..|++|||.++++|
T Consensus 382 ~-----~~-~~~~~l~~~~~~~gl~~~~~--~~~~~li~~TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 382 S-----KD-KEVEELLKRGIEGGLNLRYP--DDGALLICVTETRTKEDIDRLVEAF 429 (429)
T ss_dssp S-----S--HHHHHHHHTT----EEEGGG---SSEEEEE--TT--HHHHHHHHH--
T ss_pred C-----Cc-HHHHHHHHHHHhcCCCcccc--CCCeEEEEccCCCCHHHHHHHHhcC
Confidence 1 11 23344666666667444322 2347889999999999999999875
No 372
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=98.50 E-value=1.2e-05 Score=79.02 Aligned_cols=223 Identities=15% Similarity=0.068 Sum_probs=125.4
Q ss_pred CHHHHHHHHHHHhhccccc-c---ccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEcc
Q 011777 114 HPDVLNAIFEQSKLLQHAT-T---IYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRN 189 (477)
Q Consensus 114 ~p~v~~Av~~~l~~~~~~~-~---~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~ 189 (477)
+|++++++.+.+.....-. . ...-+-...+++.++.... .+.+.++|.-+-|+...+-..-. ++..|+..-+
T Consensus 40 ~~e~iea~~~~~~~~v~Le~~l~~g~~~~R~~~~~~~~~~~~~--aea~~ivnnn~aAVll~~~al~~--~~EvVis~g~ 115 (395)
T COG1921 40 SPEAIEAMKEAMRAPVELETDLKTGKRGARLTELAELLCGLTG--AEAAAIVNNNAAAVLLTLNALAE--GKEVVVSRGE 115 (395)
T ss_pred CHHHHHHHHHHhcccceeeeecccchhhHHHHHHHHHHhcccc--hhheeeECCcHHHHHHHHhhhcc--CCeEEEEccc
Confidence 7899999988877532110 0 0111112355555555542 36788888888888876652211 3344443211
Q ss_pred ---CccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCe
Q 011777 190 ---AYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGA 266 (477)
Q Consensus 190 ---~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~ 266 (477)
++|-.....+.. .|...+..-+.-+ ....+++.+|... .....-+..+..+-.+.
T Consensus 116 lV~gg~~~v~d~~~~------------aG~~l~EvG~tn~--------t~~~d~~~AIne~--ta~llkV~s~~~~f~~~ 173 (395)
T COG1921 116 LVEGGAFRVPDIIRL------------AGAKLVEVGTTNR--------THLKDYELAINEN--TALLLKVHSSNYGFTGM 173 (395)
T ss_pred cccCCCCChhHHHHH------------cCCEEEEecccCc--------CCHHHHHHHhccC--CeeEEEEeecccccccc
Confidence 233332222222 2333332211111 1257888888721 11222233443344454
Q ss_pred eeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCcceeeec--ccccCccceEEEEeCHHHHHhhcc
Q 011777 267 VELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMA--KGIGNGLPLGAVVTTPEIANVMAQ 344 (477)
Q Consensus 267 ~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~s--K~lg~G~pig~v~~~~~~~~~~~~ 344 (477)
+. ++++.++|++||+++|+|..-...-+ - .+---+.....+|+|+|| |-|+| ..-|.+++++++++.+..
T Consensus 174 l~-----~~~l~~ia~~~~lpvivD~aSg~~v~-~-e~~l~~~la~GaDLV~~SgdKllgG-PqaGii~GkKelI~~lq~ 245 (395)
T COG1921 174 LS-----EEELVEIAHEKGLPVIVDLASGALVD-K-EPDLREALALGADLVSFSGDKLLGG-PQAGIIVGKKELIEKLQS 245 (395)
T ss_pred cc-----HHHHHHHHHHcCCCEEEecCCccccc-c-ccchhHHHhcCCCEEEEecchhcCC-CccceEechHHHHHHHHh
Confidence 33 78899999999999999986432111 0 111113344568999998 87764 567999999999988875
Q ss_pred cccccCCCCcHHHHHHHHHHHHhhch
Q 011777 345 KIQFNTFGGNPVCSAGGLAVLRVIDK 370 (477)
Q Consensus 345 ~~~~~t~~~~~~~~aaa~a~l~~l~~ 370 (477)
....-.+-......++..++|+....
T Consensus 246 ~~l~Ralrv~K~tla~l~~aLe~y~~ 271 (395)
T COG1921 246 HPLKRALRVDKETLAALEAALELYLQ 271 (395)
T ss_pred hhhhhhhhcCcHhHHHHHHHHHHHcC
Confidence 43333344556777777788876654
No 373
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=98.49 E-value=4.1e-05 Score=81.70 Aligned_cols=308 Identities=13% Similarity=0.120 Sum_probs=157.5
Q ss_pred HHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccC-CCCCCCCC-CCCe
Q 011777 139 AIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTAL-NTWKYPIP-QGEI 216 (477)
Q Consensus 139 ~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~-~~~~~~~~-~~~~ 216 (477)
...+..+..++.++.+ ...+.+||.|.+|.+++..+. +++++|+ ++...|-+...++.+++. +.|-.+.. ..|+
T Consensus 196 ~i~eAe~~aA~~fgAd-~tyfvvNGTS~~n~av~~a~~--~~Gd~VL-vdRN~HKSv~~aLilsga~PVYl~P~~n~~Gi 271 (713)
T PRK15399 196 PHLEAEEYIARTFGAE-QSYIVTNGTSTSNKIVGMYAA--PAGSTLL-IDRNCHKSLAHLLMMSDVVPIWLKPTRNALGI 271 (713)
T ss_pred HHHHHHHHHHHHhCCC-cEEEEeCChHHHHHHHHHHhc--CCCCEEE-eecccHHHHHHHHHHcCCeeEEecccccccCC
Confidence 3556666666777653 456677777888887776543 3455555 455555554445555443 33322111 1111
Q ss_pred eeecCCCCcCCCCCCCHHHHHHHHHHHHhccCC--CCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEE-EEcCc
Q 011777 217 HHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTS--GKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVC-IADEV 293 (477)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~--~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gill-I~DEv 293 (477)
..-..+. .|. .+.+++.|+.... ...++||..|.. .|++.. +++|.++| |+.+ ++||+
T Consensus 272 ~g~I~~~----~~~------~e~I~~~i~~~p~~~~p~~vvit~pTY--dGi~yd----~~~I~~~~---g~~~ilvDEA 332 (713)
T PRK15399 272 LGGIPRR----EFT------RDSIEEKVAATTQAQWPVHAVITNSTY--DGLLYN----TDWIKQTL---DVPSIHFDSA 332 (713)
T ss_pred cCCCChh----hcc------HHHHHHHHHhCCCcCCceEEEEECCCC--CceeeC----HHHHHHHh---CCCEEEEecc
Confidence 1100000 011 2677888864321 114677776632 355555 77788877 6766 59999
Q ss_pred ccCccCCCCCC---ccccccCCCccee---e--ecccccCccce-EEEEeCHHHH-Hhhccc-ccccCCCCcHHHHHHHH
Q 011777 294 QTGFGRTGSHY---WGFETQGVIPDIV---T--MAKGIGNGLPL-GAVVTTPEIA-NVMAQK-IQFNTFGGNPVCSAGGL 362 (477)
Q Consensus 294 ~~gfgr~G~~~---~~~~~~gv~pDiv---t--~sK~lg~G~pi-g~v~~~~~~~-~~~~~~-~~~~t~~~~~~~~aaa~ 362 (477)
+.+.-.-...+ .++. .+-.+|.+ + .-|.+++ +-- +++-.+..+- +.+... ....|-+.+.+-+|..-
T Consensus 333 hgah~~F~p~~~~~sam~-~~~~aD~~i~~tQStHKtL~a-lTQaS~iHvk~~vd~~~~n~a~~m~~STSPsY~LmASLD 410 (713)
T PRK15399 333 WVPYTHFHPIYQGKSGMS-GERVPGKVIFETQSTHKMLAA-FSQASLIHIKGEYDEETFNEAFMMHTSTSPSYPIVASVE 410 (713)
T ss_pred chhhhhcCcccCCcChhh-CCCCCCeeeeeeeehhccccc-cchheeeeecCCCCHHHHHHHHHHHcCCCcHHHHHHHHH
Confidence 87542211011 1111 11145766 3 3388764 222 3443332211 112111 12234455555555555
Q ss_pred HHHHhhch---hhHHHHHHHHHHHHHHHHHHHHHhCCCc-eeeec------ccee--------E----------E-----
Q 011777 363 AVLRVIDK---ERRQAHCADVGSHLLGRLRTLQERHDII-GDVRG------RGLM--------V----------G----- 409 (477)
Q Consensus 363 a~l~~l~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~-~~v~g------~g~~--------~----------~----- 409 (477)
.+.+.++. +.+.+...+....+|+.|.++....... ..+.+ ...+ . .
T Consensus 411 ~a~~~m~~~~G~~l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l~p~~~whgf~~~~~~~~~lDP~K 490 (713)
T PRK15399 411 TAAAMLRGNPGKRLINRSVERALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPVAPGEQWHGFKDADADHMFLDPVK 490 (713)
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhccccccCceeeecCccccCCccceecCCCcccccccccccccccCCCce
Confidence 55555542 4577788888888888887763211000 00000 0000 0 0
Q ss_pred EEEeeCC----CCCCccHHHHHHHHHHHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHH
Q 011777 410 MELVTDR----KEKTPAKAETAVLFEKLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADFLVDALDYS 473 (477)
Q Consensus 410 i~~~~~~----~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~ 473 (477)
+.+.... ...+..+..+..+.+.|.++||.+...+ .+.+-+.++...|+++++.+++.|.+.
T Consensus 491 ltI~t~g~~~~g~~~~~Gi~g~~l~~~L~e~gI~~E~~d--~~~vL~l~s~g~t~~~~~~L~~aL~~f 556 (713)
T PRK15399 491 VTILTPGMDEQGNMSEEGIPAALVAKFLDERGIVVEKTG--PYNLLFLFSIGIDKTKAMGLLRGLTEF 556 (713)
T ss_pred EEEEecCcccccccccCCCCHHHHHHHHHHcCCEEEecC--CCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 0010000 0000112335567888999999998765 445667778889999999999988765
No 374
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=98.48 E-value=1.2e-05 Score=78.26 Aligned_cols=311 Identities=19% Similarity=0.186 Sum_probs=157.6
Q ss_pred HHHHHHHHhhCCCCCC-EEEEeCChHHHHHHHHHHHHhcc--C---------CceEEEEccCccCCcccccccccCCCCC
Q 011777 141 ADFAEALASKMPGNLK-VVYFVNSGTEANELAMLMARLST--G---------NLGMIALRNAYHGGSSGTIGLTALNTWK 208 (477)
Q Consensus 141 ~~l~~~La~~~~~~~~-~v~~~~sGseA~~~Al~~ar~~~--~---------~~~ii~~~~~yhG~~~~~~~~~~~~~~~ 208 (477)
.++-.++.+..++..+ .-+|++||+-+|..|+..||... + +..|+..+.--|=+..-+....+
T Consensus 144 ~~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa~lg----- 218 (510)
T KOG0629|consen 144 EEVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKKAAAFLG----- 218 (510)
T ss_pred HHHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHHHHHHhc-----
Confidence 3455555665554432 56799999999999999998621 1 11222222222222111111111
Q ss_pred CCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccC-CCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcE
Q 011777 209 YPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGT-SGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGV 287 (477)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~-~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gil 287 (477)
+....+.. ++...++... .+|||+.|...+ ++.+-++ ++..-|++ +.-.-+.|..|.++|++|+.+
T Consensus 219 --~gtd~c~~--v~t~e~Gkm~------~~dLe~kile~k~kg~~Pf~-vnaTaGTT--V~GAFDdL~~iadiC~k~~lW 285 (510)
T KOG0629|consen 219 --LGTDHCIK--VKTDERGKMI------PDDLEKKILEAKAKGGVPFF-VNATAGTT--VLGAFDDLNGIADICEKHKLW 285 (510)
T ss_pred --cCCceeEE--ecccccCccc------hHHHHHHHHHHHhcCCCCeE-EEecCCce--eeeccCcHHHHHHHHHhcCEE
Confidence 00011222 2223333333 588988876332 2223233 33222332 222233399999999999999
Q ss_pred EEEcCcccCccCCCCCCccc----cccCCC-cceeeec--ccccCccceEEEEeCHH-HHHhhcccc----------ccc
Q 011777 288 CIADEVQTGFGRTGSHYWGF----ETQGVI-PDIVTMA--KGIGNGLPLGAVVTTPE-IANVMAQKI----------QFN 349 (477)
Q Consensus 288 lI~DEv~~gfgr~G~~~~~~----~~~gv~-pDivt~s--K~lg~G~pig~v~~~~~-~~~~~~~~~----------~~~ 349 (477)
+++|.+..| | -+.+. ...|+. .|.++.+ |-+|..++.++.+.+.+ +.+...+.. +-.
T Consensus 286 mHvDAAwGG----g-lLmS~k~R~kl~Giera~SvtwnpHK~~gaplqCsa~l~r~~gll~~Cn~~~A~YLFq~dK~Ydv 360 (510)
T KOG0629|consen 286 MHVDAAWGG----G-LLMSRKHRHKLTGIERANSVTWNPHKLMGAPLQCSAFLTREEGLLQRCNQMSAIYLFQQDKFYDV 360 (510)
T ss_pred EEeeccccc----c-cccChhhHhhccCccccCceeecHHHhhcCcchhhHHHHHHHHHHHhhcccchhhhhccCceeec
Confidence 999998765 1 11111 223453 4666654 88888899999888876 333332211 001
Q ss_pred CC-CCcHHHHHH-------HHHHHHhh---chhhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCC--
Q 011777 350 TF-GGNPVCSAG-------GLAVLRVI---DKERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDR-- 416 (477)
Q Consensus 350 t~-~~~~~~~aa-------a~a~l~~l---~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~-- 416 (477)
.| .++-..+.. ..-.++.- .-+..++++-++.+||.++|++... +..+....++-.-+.+-++...
T Consensus 361 S~DTgdK~iQCGRh~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~-~~~l~~~~pe~~nv~fw~vp~~lR 439 (510)
T KOG0629|consen 361 SYDTGDKAIQCGRHVDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREG-FEMLFELEPEHVNVCFWYVPPSLR 439 (510)
T ss_pred ccccccchhhcCccccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhccc-ceehhcCCCceEEEeeccCchHhc
Confidence 11 111111111 11111110 1145677888889999999887531 1112121111111111111110
Q ss_pred -CCCCccH-----HHHHHHHHHHHHcCcee---eccCCCCCEEEE--eCCCCCcHHHHHHHHHHHHHHHhh
Q 011777 417 -KEKTPAK-----AETAVLFEKLRELGVLV---GKGGLHGNVFRI--KPPMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 417 -~~~~~~~-----~~~~~~~~~l~~~Gv~v---~~~~~~~~~iRi--~p~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
....+.. ..+..+...|.++|-.. .|.+...|++|+ ++| +.+.+|+|.+++.|++.=++
T Consensus 440 ~~~~~~e~~~rL~kVaPkIK~~Mm~~Gt~Mi~YqPl~~~~nffr~v~sn~-a~~~ad~dflldEIerlgq~ 509 (510)
T KOG0629|consen 440 GWQENPERDSRLVKVAPKIKERMMKKGTTMIGYQPLGDKPNFFRMVISNP-ALTEADLDFLLDEIERLGQD 509 (510)
T ss_pred cCcccchhhhHHHhhCcHHHHHHHhccceeeEecccccccchhheecccc-hhhhhhHHHHHHHHHHhccC
Confidence 0111111 11235667888888543 455556787775 333 67899999999999876443
No 375
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.46 E-value=3.6e-07 Score=88.71 Aligned_cols=224 Identities=19% Similarity=0.167 Sum_probs=54.2
Q ss_pred ccCCCC--CHHHHHHHHHHHhhccccccccC-----C-hHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhcc
Q 011777 108 VSCGHC--HPDVLNAIFEQSKLLQHATTIYL-----H-HAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLST 179 (477)
Q Consensus 108 ~~lGh~--~p~v~~Av~~~l~~~~~~~~~~~-----~-~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~ 179 (477)
.|||-+ ++++.+++.+.+..+.. -.|. . .-...+.+.|+..++ .+..+++|+.+.|+.+++.... .
T Consensus 11 TnLGRs~l~~~a~~a~~~~a~~Y~n--LE~dl~~G~Rg~R~~~v~~ll~~ltg--AeaA~VvNnnaAAv~L~l~~la--~ 84 (367)
T PF03841_consen 11 TNLGRSPLSEEAIEAVAEVASGYSN--LEYDLETGKRGSRYAHVEELLCELTG--AEAALVVNNNAAAVLLALNTLA--K 84 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccccccccccc--cccccccccccccccccccccccccc--cccccccccccccccccccccc--c
Confidence 456653 57888888776654221 1110 0 002344555666663 4678899999988888776332 2
Q ss_pred CCceEEEEccC---ccCC--cccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeE
Q 011777 180 GNLGMIALRNA---YHGG--SSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAG 254 (477)
Q Consensus 180 ~~~~ii~~~~~---yhG~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~ 254 (477)
++ .||+-.|- +-|. ....+.. .|...+.+ +....-.+.|++++|. +++++
T Consensus 85 ~~-EvIvsRGelVeiGgsFRip~vm~~------------sGa~lvEV--------GttN~t~~~Dye~AI~----e~Ta~ 139 (367)
T PF03841_consen 85 GK-EVIVSRGELVEIGGSFRIPDVMRQ------------SGARLVEV--------GTTNRTHLSDYEKAIT----ENTAA 139 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cc-cccccccccccccccccccccccc------------cccccccc--------cccccccccccccccc----ccccc
Confidence 44 34443321 1110 1111111 22222211 1111122577888886 45555
Q ss_pred E-EecccC----CCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccC------ccCCCCCCccccccCCCcceeeec--c
Q 011777 255 F-IAETIQ----GVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTG------FGRTGSHYWGFETQGVIPDIVTMA--K 321 (477)
Q Consensus 255 v-i~epi~----~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g------fgr~G~~~~~~~~~gv~pDivt~s--K 321 (477)
+ .+-+.| |-.+. ++ ++++.+++++|++++|.|---.. +|..+ ...-.+....-.|++||| |
T Consensus 140 ll~Vh~Sn~~i~GFt~~-~~----~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl~~-Ep~v~~~~~~GaDlV~fSGdK 213 (367)
T PF03841_consen 140 LLKVHTSNFRIQGFTGE-VS----LEELAELAKEHGLPVIVDLGSGLLVDLSPYGLPD-EPTVQEYLAAGADLVTFSGDK 213 (367)
T ss_dssp --------------------------HHHHHHHHHT--EEEE-TTHHHHHHHTT-----------CCCCT-SEEEEETTS
T ss_pred ccccccccccccccccc-cc----HHHHHHHHhhcCCcEEEECCCCCCcCcccccCcc-ccHHHHHhhcCCCEEEEECCC
Confidence 4 454322 22222 22 89999999999999999975421 12222 122223344568999998 8
Q ss_pred cccCccceEEEEeCHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhc
Q 011777 322 GIGNGLPLGAVVTTPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVID 369 (477)
Q Consensus 322 ~lg~G~pig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~ 369 (477)
-+|| ...|.+++++++++.++.-...-.+-..-+..++..++|+...
T Consensus 214 lLGG-PQaGiI~Gkk~lI~~lk~~pl~RalrvdK~tla~L~atL~~Y~ 260 (367)
T PF03841_consen 214 LLGG-PQAGIIVGKKELIEKLKKHPLGRALRVDKLTLAALEATLRLYL 260 (367)
T ss_dssp SSSS--S-EEEEEEHHHHHHHHHHHHTTT-B--HHHHHHHHHHHHH--
T ss_pred cCCC-CCeEEEEeCHHHHHHHhhCCCcceEeeCHHHHHHHHHHHHHHH
Confidence 8876 3469999999999988753333344556777888888887643
No 376
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=98.45 E-value=6.6e-05 Score=79.35 Aligned_cols=151 Identities=16% Similarity=0.181 Sum_probs=86.3
Q ss_pred HHHHHHHHhcc--CCCCeeEEEecccCCCCCeeeCCchhHHHHHHHH---HHhCc--EEEEcCcccCccCC---C-C-CC
Q 011777 237 AQDLQDHIDFG--TSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIV---RKAGG--VCIADEVQTGFGRT---G-S-HY 304 (477)
Q Consensus 237 ~~~le~~i~~~--~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~---~~~gi--llI~DEv~~gfgr~---G-~-~~ 304 (477)
.++|++.|+.. ....+.+|+..--..+.|.+-| +++|.++| +++|+ ++++|.++.|+.+. . . .+
T Consensus 262 ~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDp----l~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~ 337 (608)
T TIGR03811 262 INELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDG----IDKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNF 337 (608)
T ss_pred HHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCC----HHHHHHHHHHHHHcCCceeEeeeccccchhhhhhccccccc
Confidence 47777777532 2234455555544444576766 88888888 77898 69999999987421 0 0 00
Q ss_pred ccc--------------------------cccCC-Ccceeeec--ccccCccceEEEEeCHH-HHHhhccc---c--cc-
Q 011777 305 WGF--------------------------ETQGV-IPDIVTMA--KGIGNGLPLGAVVTTPE-IANVMAQK---I--QF- 348 (477)
Q Consensus 305 ~~~--------------------------~~~gv-~pDivt~s--K~lg~G~pig~v~~~~~-~~~~~~~~---~--~~- 348 (477)
..+ ...++ ..|-+|+. |.+.-.++.|+++.+.. +.+.+... . ..
T Consensus 338 ~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~~Py~~G~ll~Rd~~~~~~~~~~a~Yl~~~~~ 417 (608)
T TIGR03811 338 IPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGYIPYSAGGIVIQDIRMRDVISYFATYVFEKGA 417 (608)
T ss_pred cccchhhcccccccccccccccccHhHHHHHhcCcCceEEEeCcccccccCCCeEEEEEeCHHHHHHHhcCcchhccccc
Confidence 000 01123 35666654 88777788998888754 43433211 0 00
Q ss_pred --------cCCCCc--HHHHHHHHHHHHhh--ch---hhHHHHHHHHHHHHHHHHHHH
Q 011777 349 --------NTFGGN--PVCSAGGLAVLRVI--DK---ERRQAHCADVGSHLLGRLRTL 391 (477)
Q Consensus 349 --------~t~~~~--~~~~aaa~a~l~~l--~~---~~~~~~~~~~~~~l~~~L~~l 391 (477)
.+..+. ....++...+++.+ .. .+++++..+..+++.+.|++.
T Consensus 418 ~~p~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~ 475 (608)
T TIGR03811 418 DIPALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNL 475 (608)
T ss_pred cCcccccccceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 112222 23345555667665 33 345666677777787777663
No 377
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=98.42 E-value=3.8e-05 Score=73.58 Aligned_cols=281 Identities=16% Similarity=0.151 Sum_probs=146.7
Q ss_pred ChHHHHHHHHHHhhCC---CCCCEEEEeCChHHHHHHHHHHHHhc----cCCceEEEEccCccCCcccccccccCCCCCC
Q 011777 137 HHAIADFAEALASKMP---GNLKVVYFVNSGTEANELAMLMARLS----TGNLGMIALRNAYHGGSSGTIGLTALNTWKY 209 (477)
Q Consensus 137 ~~~~~~l~~~La~~~~---~~~~~v~~~~sGseA~~~Al~~ar~~----~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~ 209 (477)
.+..++..++|.+..+ .+-..|+|.+|+|+-+.+|+-..-.. .+.-+|++-.|-|.-+...+--..
T Consensus 45 s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~------- 117 (363)
T PF04864_consen 45 SPELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFFD------- 117 (363)
T ss_dssp -HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT--------
T ss_pred cHHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhcc-------
Confidence 3434444444444443 12357999999999999988744221 123467776666643322211110
Q ss_pred CCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEE
Q 011777 210 PIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCI 289 (477)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI 289 (477)
...+...-....+. ........-=+++.|+|+.|....+ +++.-+..+|
T Consensus 118 ---s~~y~w~Gda~~~~------------------~~~~~~~~IElVTSPNNPDG~lr~~----------V~~g~~~k~I 166 (363)
T PF04864_consen 118 ---SRLYKWAGDASNFK------------------NSDNPSPYIELVTSPNNPDGQLREA----------VLNGSSGKVI 166 (363)
T ss_dssp ---BTTEEEEEECCCGT------------------T-S-CCGEEEEEESS-TTT----------------SSTTTEEEEE
T ss_pred ---ccCccccccHHhhc------------------cCCCCCCeEEEEeCCCCCcccccch----------hcCCCCccee
Confidence 00111110000010 1011234556778887766643221 3456667789
Q ss_pred EcCcccCccCCCCCCccccccCCCccee--eeccccc-CccceEEEEeCH-HHHHhhcccccccCCCCcHHHHHHHHHHH
Q 011777 290 ADEVQTGFGRTGSHYWGFETQGVIPDIV--TMAKGIG-NGLPLGAVVTTP-EIANVMAQKIQFNTFGGNPVCSAGGLAVL 365 (477)
Q Consensus 290 ~DEv~~gfgr~G~~~~~~~~~gv~pDiv--t~sK~lg-~G~pig~v~~~~-~~~~~~~~~~~~~t~~~~~~~~aaa~a~l 365 (477)
.|=+|--- ++.++.. ...-||+ |+||.-| +|-|+||.+.+. ++.+.+......+|.+.+-=+|.=++..|
T Consensus 167 ~D~AYYWP-----hyTpI~~-~aD~DiMLFT~SK~TGHAGSR~GWAlVKD~~Va~kM~~y~~lnTiGvS~dsQLRa~kiL 240 (363)
T PF04864_consen 167 HDLAYYWP-----HYTPITA-PADHDIMLFTLSKLTGHAGSRFGWALVKDEEVAKKMTKYMELNTIGVSRDSQLRALKIL 240 (363)
T ss_dssp EE-TT-ST-----TTS---S--B--SEEEEEHHHHCS-GGG-EEEEEES-HHHHHHHHHHHHHHCSS--HHHHHHHHHHH
T ss_pred eeeeeecc-----cccccCC-CCCCceEEEEEecccCccccccceeeecCHHHHHHHHHHHHHhcccCcHHHHHHHHHHH
Confidence 99887411 1222211 1223544 7899998 699999998875 57777766666788888888888787777
Q ss_pred Hhhch----h----hHHHHHHHHHHHHHHHHHHHHHhCCC-------------cee-eeccceeEEEEEeeCCCCCCccH
Q 011777 366 RVIDK----E----RRQAHCADVGSHLLGRLRTLQERHDI-------------IGD-VRGRGLMVGMELVTDRKEKTPAK 423 (477)
Q Consensus 366 ~~l~~----~----~~~~~~~~~~~~l~~~L~~l~~~~~~-------------~~~-v~g~g~~~~i~~~~~~~~~~~~~ 423 (477)
+.+.+ + ++.+.-.+.-+..-++|+++..+... ... ......+.|+.+..+.
T Consensus 241 k~v~~~~~~~~~~~~~F~f~~~~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~ee------- 313 (363)
T PF04864_consen 241 KVVLDGYGTEKGTEDIFHFGYSTMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREPSPAFAWLKCEREE------- 313 (363)
T ss_dssp HHHHHHCCHHTTTTSHHHHHHHHHHHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE---SEEEEEESSCG-------
T ss_pred HHHHhcccCCCCccchHHHHHHHHHHHHHHHHHHHHhcCceecCcCCchhccccccccCCCCCeEEEecCCcc-------
Confidence 76533 1 24333333333333444444433221 111 2234667788875321
Q ss_pred HHHHHHHHHHHHcCceeeccCCC---CCEEEEeCCCCCcHHHHHHHHHHHHH
Q 011777 424 AETAVLFEKLRELGVLVGKGGLH---GNVFRIKPPMCFTKDDADFLVDALDY 472 (477)
Q Consensus 424 ~~~~~~~~~l~~~Gv~v~~~~~~---~~~iRi~p~~~~t~e~i~~~l~~l~~ 472 (477)
...+...|++.||+.+.|..+ ..++|+ ++..++++.|.++++|..
T Consensus 314 --d~DC~~~l~~~~I~tr~G~~fga~~ryVRl--Sml~~~d~Fd~l~~rL~~ 361 (363)
T PF04864_consen 314 --DEDCYAVLREAKIITRSGVLFGADSRYVRL--SMLKRDDDFDQLLERLSK 361 (363)
T ss_dssp --GSSHHHHHHCTTEEEEEGGGGTS-TTEEEE--ESSS-HHHHHHHHHHHHC
T ss_pred --cccHHHHHHhCCcccCCCCccCCCCCeEEE--eccCCHHHHHHHHHHHHh
Confidence 124677888899999887544 478999 588999999999999875
No 378
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=98.42 E-value=0.00027 Score=68.24 Aligned_cols=198 Identities=15% Similarity=0.094 Sum_probs=120.3
Q ss_pred eeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCcceeeec--ccccC-ccc
Q 011777 252 VAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVTMA--KGIGN-GLP 328 (477)
Q Consensus 252 ~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt~s--K~lg~-G~p 328 (477)
.+-|...++....|+..+...+. .. +.++|+|-.-.-|+|. ..+. +-|++.+| |.+|+ |
T Consensus 145 ~ayv~~~~NeTi~Gv~v~~~p~~------~~--~~~~v~D~SS~ilsr~----iDvs----k~dviyagaQKnlGpaG-- 206 (365)
T COG1932 145 DAYVHFCWNETISGVEVPELPDI------GS--DGLLVADASSAILSRP----IDVS----KYDVIYAGAQKNLGPAG-- 206 (365)
T ss_pred ccEEEEecCCcccceEccCCCCC------CC--CceEEEecccHHhcCC----CChh----HcceEEEehhhccCccc--
Confidence 45577777666677666543321 11 2789999765434331 1111 34778776 99996 7
Q ss_pred eEEEEeCHHHHHhhccc------------ccccCCCCcHHHHH-HHHHHHHhhchhh----HHHHHHHHHHHHHHHHHHH
Q 011777 329 LGAVVTTPEIANVMAQK------------IQFNTFGGNPVCSA-GGLAVLRVIDKER----RQAHCADVGSHLLGRLRTL 391 (477)
Q Consensus 329 ig~v~~~~~~~~~~~~~------------~~~~t~~~~~~~~a-aa~a~l~~l~~~~----~~~~~~~~~~~l~~~L~~l 391 (477)
++.++.++++.+.+... ...++|+.+|..+. ....+++.+.... +.++-++..+.|.+.+.+-
T Consensus 207 ltvvIvr~~~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s 286 (365)
T COG1932 207 LTVVIVRPDLLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKS 286 (365)
T ss_pred eEEEEEcHHHHhcccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 88999999998877542 24567877665443 3446677776643 4444444444454444332
Q ss_pred HHhCCCceeeeccceeE-EEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHH
Q 011777 392 QERHDIIGDVRGRGLMV-GMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADFLVDAL 470 (477)
Q Consensus 392 ~~~~~~~~~v~g~g~~~-~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l 470 (477)
.-+........++.|. .+.+. +......+..++.++|+..-.|-...+-+|++.--+++.++++.+++-+
T Consensus 287 -~fy~~~v~~~~RS~mnV~f~~~--------~~~ld~~fv~eae~~gl~~lkGhr~vgGmRasiynA~~~e~veaL~~fm 357 (365)
T COG1932 287 -DFYRNLVAKANRSRMNVTFTLV--------DAELDKGFVAEAEAAGLIYLKGHRSVGGLRASIYNAVPLEDVEALTDFM 357 (365)
T ss_pred -CccccccchhhccceeEEEEcC--------cHHHHHHHHHHHHHcCCceeccccCCCceeeeeecCCCHHHHHHHHHHH
Confidence 1111111113344443 34442 2334567888899999888766332334899888889999999999999
Q ss_pred HHHHhh
Q 011777 471 DYSMSK 476 (477)
Q Consensus 471 ~~~l~~ 476 (477)
+.+.++
T Consensus 358 ~~f~~~ 363 (365)
T COG1932 358 DWFEET 363 (365)
T ss_pred HHHHHh
Confidence 887653
No 379
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=98.38 E-value=8.3e-05 Score=79.43 Aligned_cols=305 Identities=13% Similarity=0.124 Sum_probs=156.4
Q ss_pred HHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccC-CCCCCCCC-CCCe
Q 011777 139 AIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTAL-NTWKYPIP-QGEI 216 (477)
Q Consensus 139 ~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~-~~~~~~~~-~~~~ 216 (477)
...+..+..++.++.+ ...+.+||.|.+|.+++..+. ++++.|+ ++...|-+...++.+++. +.|-.+.. ..|+
T Consensus 196 ~i~eAe~~AA~~fgAd-~tyfvvNGTS~~n~av~~a~~--~~Gd~VL-vdRN~HKSv~haLilsga~PVYl~P~rn~~Gi 271 (714)
T PRK15400 196 PHKEAEEYIARVFNAD-RSYMVTNGTSTANKIVGMYSA--PAGSTVL-IDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGI 271 (714)
T ss_pred HHHHHHHHHHHHhCCC-cEEEEeCchHHHHHHHHHHhc--CCCCEEE-eecccHHHHHHHHHHcCCeEEEecccccccCC
Confidence 3556666666667553 456667777888877766542 3445555 555556555555555543 33322111 1111
Q ss_pred eeecCCCCcCCCCCCCHHHHHHHHHHHHhccCC--CCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcc
Q 011777 217 HHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTS--GKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQ 294 (477)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~--~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~ 294 (477)
.....+ ..|+ .+.+++.|+.... ...++||..|.. .|.+.. +++|.++|+.++ |++||++
T Consensus 272 ~g~I~~----~~~~------~e~i~~~i~~~p~ak~p~~~vit~pTY--dG~~yd----~~~I~~~~~~~~--ilvDEAw 333 (714)
T PRK15400 272 LGGIPQ----SEFQ------HATIAKRVKETPNATWPVHAVITNSTY--DGLLYN----TDFIKKTLDVKS--IHFDSAW 333 (714)
T ss_pred ccCCCc----cccC------HHHHHHHHHhCccccCccEEEEECCCC--ccEecC----HHHHHHHhCCCC--EEEEccc
Confidence 110000 0111 3677777764321 122577777632 355555 789999999887 6899998
Q ss_pred cCccCCCCCCc----cccccCCCc-c--eeeec--ccccC---c--cce-EEEEeCHHHHHhhcccccccCCCCcHHHHH
Q 011777 295 TGFGRTGSHYW----GFETQGVIP-D--IVTMA--KGIGN---G--LPL-GAVVTTPEIANVMAQKIQFNTFGGNPVCSA 359 (477)
Q Consensus 295 ~gfgr~G~~~~----~~~~~gv~p-D--ivt~s--K~lg~---G--~pi-g~v~~~~~~~~~~~~~~~~~t~~~~~~~~a 359 (477)
.+.-.-. ..+ +++ .|-.+ | ++|=| |.+++ + +-+ |. +-.+.+.+.+. ...|-+.+.+-+|
T Consensus 334 gah~~F~-p~~~~~sam~-~ga~~~~~i~vtQStHKtL~alTQaS~LHvkg~-vd~~~~n~a~~---m~~STSPsY~l~A 407 (714)
T PRK15400 334 VPYTNFS-PIYEGKCGMS-GGRVEGKVIYETQSTHKLLAAFSQASMIHVKGD-VNEETFNEAYM---MHTTTSPHYGIVA 407 (714)
T ss_pred hhhhccC-cccCCcChhh-cCCCCCCceEEEEchhhcccchhHHhHHHHcCC-CCHHHHHHHHH---HHcCCCcHHHHHH
Confidence 7652211 111 111 12211 3 55444 77764 2 111 21 11122222222 2233445555555
Q ss_pred HHHHHHHhhch---hhHHHHHHHHHHHHHHHHHHHHHhC-CCceeee--------------------ccce------e--
Q 011777 360 GGLAVLRVIDK---ERRQAHCADVGSHLLGRLRTLQERH-DIIGDVR--------------------GRGL------M-- 407 (477)
Q Consensus 360 aa~a~l~~l~~---~~~~~~~~~~~~~l~~~L~~l~~~~-~~~~~v~--------------------g~g~------~-- 407 (477)
..-.+...++. +.+.+...+....+|+.|.++.... +....+. |... +
T Consensus 408 SLD~a~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~lD 487 (714)
T PRK15400 408 STETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLD 487 (714)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcccCccccccCcccccccccccC
Confidence 55555555542 4577788888888888887753210 0000000 0000 0
Q ss_pred -EEEEEeeCCCC----CCccHHHHHHHHHHHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHH
Q 011777 408 -VGMELVTDRKE----KTPAKAETAVLFEKLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADFLVDALDYS 473 (477)
Q Consensus 408 -~~i~~~~~~~~----~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~ 473 (477)
.-+.+...... ....+..+..+.+.|.++||.+...+ .+.+-|.++...|+++++.+++.|.+.
T Consensus 488 P~Klti~tpgi~~~g~~~~~Gipg~~v~~~L~e~gI~~E~~d--~~~iLfl~s~g~t~~~~~~L~~aL~~f 556 (714)
T PRK15400 488 PIKVTLLTPGMKKDGTMSDFGIPASIVAKYLDEHGIVVEKTG--PYNLLFLFSIGIDKTKALSLLRALTDF 556 (714)
T ss_pred CceEEEEeCCCCCCccccccCCCHHHHHHHHHHcCCEEEecC--CCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 00001000000 00012224567788899999998765 455667778889999999999998765
No 380
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=98.25 E-value=0.00023 Score=66.67 Aligned_cols=330 Identities=17% Similarity=0.158 Sum_probs=181.0
Q ss_pred ccCCCCCHHHHHHHHHHHhhcc------ccccc----cCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHh
Q 011777 108 VSCGHCHPDVLNAIFEQSKLLQ------HATTI----YLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARL 177 (477)
Q Consensus 108 ~~lGh~~p~v~~Av~~~l~~~~------~~~~~----~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~ 177 (477)
++||..+....+.+.+.+++.. |..+. ...+. ....++...+.+.+.|-++||=|--+...+-...+
T Consensus 74 NSLGLmPK~t~~~~~~eLDkWak~av~gH~~GkvPW~~~De~---il~l~~~iVGA~e~EvavmNsLTvNlh~Ll~sFyK 150 (465)
T KOG3846|consen 74 NSLGLMPKSTRNSINAELDKWAKCAVEGHFKGKVPWVSIDEP---ILPLLAPIVGAQENEVAVMNSLTVNLHSLLISFYK 150 (465)
T ss_pred cccccCchhhHhHHHHHHHHHHhhhhhcccccccceeecchh---hhhhhhhhccCCchhhhhHhhhhhHHHHHHHHhcC
Confidence 3589888888888888887632 21111 11233 33445555566667788888776444443333333
Q ss_pred cc-CCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHH--HHHHHHHHHhccCCCCeeE
Q 011777 178 ST-GNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAAR--YAQDLQDHIDFGTSGKVAG 254 (477)
Q Consensus 178 ~~-~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~le~~i~~~~~~~~a~ 254 (477)
.| +|.+|+.-..+|.....+.-+........ +......+. |. ++++ ..+|+.+.|+.. .+.+|.
T Consensus 151 PTekR~KILlE~kaFPSDhYAiesQ~~lhG~~---~e~sm~~ie---PR------EGEetlRteDILd~IEkn-gDeiA~ 217 (465)
T KOG3846|consen 151 PTEKRFKILLEKKAFPSDHYAIESQCKLHGIS---PENSMIQIE---PR------EGEETLRTEDILDTIEKN-GDEIAL 217 (465)
T ss_pred CcchhhhhhhccCCCCchHHHHHhhhhhcCCC---hHHheEEec---cc------ccccchhHHHHHHHHHhc-CCeEEE
Confidence 33 45677776667765444333221110000 001111110 10 1111 136666667643 468999
Q ss_pred EEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCccccccCCCcceee--ecccccCc-cceEE
Q 011777 255 FIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVT--MAKGIGNG-LPLGA 331 (477)
Q Consensus 255 vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt--~sK~lg~G-~pig~ 331 (477)
|.+..+|--+|.... +.+|-..-+..|+++=+|=+++ +|- -..-...||+ |..| -=|-+..| =.||.
T Consensus 218 v~fSGvqyYTGQ~Fd----i~aIT~Agq~kgc~VGfDLAHA-vgN---VpL~LHdWgV--DFACWCSYKYlnaGaGgIgG 287 (465)
T KOG3846|consen 218 VCFSGVQYYTGQYFD----IGAITFAGQFKGCLVGFDLAHA-VGN---VPLQLHDWGV--DFACWCSYKYLNAGAGGIGG 287 (465)
T ss_pred EEeecceeecccccc----hhhhhhcccCCCcEechhhhhh-hcC---CceEEeecCC--ceEEEeeecccccCCCccce
Confidence 999989888886554 6666665666799998998876 442 2333345565 5554 33766644 25666
Q ss_pred EEeCHHHHHhhccc------------------------ccccCCCCcH-HHHHHHHHHHHhhchhhHHHHHHHHHHHHHH
Q 011777 332 VVTTPEIANVMAQK------------------------IQFNTFGGNP-VCSAGGLAVLRVIDKERRQAHCADVGSHLLG 386 (477)
Q Consensus 332 v~~~~~~~~~~~~~------------------------~~~~t~~~~~-~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~ 386 (477)
+...++........ ..+.-.+.+| +..+|....|++...-. .+.++++.-+|-.
T Consensus 288 lFvHekh~~~~~prl~GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe~F~q~~-~~~lRkrS~lLTg 366 (465)
T KOG3846|consen 288 LFVHEKHTKESLPRLAGWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLELFAQFN-INELRKRSLLLTG 366 (465)
T ss_pred eeeehhhhcchhhHHhhhccCCcchhhhhccccccCccccccccCCCcHhHHHHHHhhHHHHHHhh-HHHHhhhhhhHHh
Confidence 66554433221111 0111112233 34445556676654322 3444444433333
Q ss_pred HHHHHHHhC-----CC-----------ceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCCCCEE
Q 011777 387 RLRTLQERH-----DI-----------IGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLHGNVF 450 (477)
Q Consensus 387 ~L~~l~~~~-----~~-----------~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~i 450 (477)
-|..+.+.. +. +..+..+|.-+.+.|..+ ...++++|.++|+++-.- ..|+|
T Consensus 367 YleyL~k~~~g~~~~~rt~Kl~~~IiTP~~~~erGcQLsl~Fssp----------~~~vfqeL~krGv~~DkR--~PNvI 434 (465)
T KOG3846|consen 367 YLEYLLKASKGYKHPLRTEKLFFTIITPTSTDERGCQLSLYFSSP----------TPKVFQELHKRGVIGDKR--RPNVI 434 (465)
T ss_pred HHHHHHHHhcccCchhhhcceeEEEeCCcccccccceEEEEeCCC----------chHHHHHHHHcCeecccc--CCCce
Confidence 333332211 10 112333455555555432 357899999999998753 47899
Q ss_pred EEeC-CCCCcHHHHHHHHHHHHHHHhh
Q 011777 451 RIKP-PMCFTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 451 Ri~p-~~~~t~e~i~~~l~~l~~~l~~ 476 (477)
|+.| |+..+-.|+-.+++.|.+++..
T Consensus 435 RvAPvpLYN~f~Dvy~f~n~L~e~~d~ 461 (465)
T KOG3846|consen 435 RVAPVPLYNTFSDVYIFVNALNEAMDK 461 (465)
T ss_pred EeecchhhccHHHHHHHHHHHHHHHHH
Confidence 9987 6788999999999999998864
No 381
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.16 E-value=0.00036 Score=68.70 Aligned_cols=226 Identities=12% Similarity=0.052 Sum_probs=118.0
Q ss_pred HHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCc-cc---cccCC
Q 011777 237 AQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYW-GF---ETQGV 312 (477)
Q Consensus 237 ~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~-~~---~~~gv 312 (477)
.+++|+.++..+++.+.+|+ .......+ .. ++.+++|.++|++||+..|+.-+|+ . ..++.. -+ ...|.
T Consensus 141 ~~~ie~~i~~~G~~~iLcvl-tttscfap-r~--~D~i~~IakiC~~~~IPhlvNnAYg-v--Q~~~~~~~i~~a~~~GR 213 (389)
T PF05889_consen 141 LEAIEAKIEELGADNILCVL-TTTSCFAP-RL--PDDIEEIAKICKEYDIPHLVNNAYG-V--QSSKCMHLIQQAWRVGR 213 (389)
T ss_dssp HHHHHHHHHHHCGGGEEEEE-EESSTTTT-B------HHHHHHHHHHHT--EEEEGTTT-T--T-HHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHhCCCCeEEEE-EecCccCC-CC--CccHHHHHHHHHHcCCceEEccchh-h--hHHHHHHHHHHHHhcCC
Confidence 46777777654444454544 44444444 22 2348999999999999999999885 4 000000 00 00122
Q ss_pred Cc-ceeeecccccCccceEEEEe-CHHHHHhhcccccccCCCCcHHHHHHHHHHHHhhch---hhHHHHHHHHHHHHHHH
Q 011777 313 IP-DIVTMAKGIGNGLPLGAVVT-TPEIANVMAQKIQFNTFGGNPVCSAGGLAVLRVIDK---ERRQAHCADVGSHLLGR 387 (477)
Q Consensus 313 ~p-Divt~sK~lg~G~pig~v~~-~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~---~~~~~~~~~~~~~l~~~ 387 (477)
.| ++-++.|-|--+..-+.+.+ .+..++.+....-+-.+..+.+- ....|..+.. ..++....+...+++++
T Consensus 214 vda~vqS~dkNF~VPvGgai~As~~~~~i~~vs~~YpGRas~sp~ld---~~itLl~LG~~g~~~ll~~r~~~f~~l~er 290 (389)
T PF05889_consen 214 VDAFVQSTDKNFMVPVGGAIMASFDPSGILAVSKEYPGRASASPSLD---LFITLLSLGCTGYGALLKERKASFPYLKER 290 (389)
T ss_dssp CSEEEEEHHHHHCEESSHEEEEESSHHHHHHHHHTSHSHBTSHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cceeeeecCCCEEecCCCcEEEecCHHHHHHHHHHhhhhhhcccchH---HHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 22 22345566541111123333 34566555432211111111111 1222222222 35667777888999999
Q ss_pred HHHHHHhCC-CceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceee----ccCC---------CCCEEEEe
Q 011777 388 LRTLQERHD-IIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVG----KGGL---------HGNVFRIK 453 (477)
Q Consensus 388 L~~l~~~~~-~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~----~~~~---------~~~~iRi~ 453 (477)
|+++.++++ .+.+.+.....+.+++..-... .. .....+...|..+||.-. +... ...++-+.
T Consensus 291 l~~~aee~~e~ll~~p~N~is~a~tl~~l~~~--~~-k~~~~lgs~Lf~R~VsG~RvV~~~~~~~tsh~~~yp~~Ylt~A 367 (389)
T PF05889_consen 291 LKKWAEEVGERLLETPRNHISMAFTLDTLYEI--SQ-KDGTFLGSMLFKRGVSGIRVVTPGGKKQTSHSSNYPCPYLTAA 367 (389)
T ss_dssp HHHHHHHTTEEBSSSTT-SSEEEEE-TTCCTC--CS-SHHHHHHHHHHHTTEESSEEEETSSCEEETTSS--SSSEEEEE
T ss_pred HHHHHHHhhhhhcCCCCCCeeEEEECccchhh--cc-chhhhHHHHHHhCCcccceeeccCCCcccccCCCCchHHHHHH
Confidence 999998886 3444444444556665321111 11 234678889999987422 2111 12577786
Q ss_pred CCCCCcHHHHHHHHHHHHHHHh
Q 011777 454 PPMCFTKDDADFLVDALDYSMS 475 (477)
Q Consensus 454 p~~~~t~e~i~~~l~~l~~~l~ 475 (477)
-.+.+++||||.++++|+++++
T Consensus 368 saiG~~~eevd~~v~rL~k~i~ 389 (389)
T PF05889_consen 368 SAIGMTREEVDYFVKRLDKIIK 389 (389)
T ss_dssp E-TT--HHHHHHHHHHHHHHHH
T ss_pred HHhCCCHHHHHHHHHHHHHHhC
Confidence 6788999999999999999875
No 382
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=98.12 E-value=0.00025 Score=68.62 Aligned_cols=210 Identities=17% Similarity=0.146 Sum_probs=115.5
Q ss_pred CCHHHHHHHHHH-Hhhc-cccccc--cCChHHHHHHHHHHhhCCCCCCEEEEe---CChHHHHHHHHHHHHhccCCceEE
Q 011777 113 CHPDVLNAIFEQ-SKLL-QHATTI--YLHHAIADFAEALASKMPGNLKVVYFV---NSGTEANELAMLMARLSTGNLGMI 185 (477)
Q Consensus 113 ~~p~v~~Av~~~-l~~~-~~~~~~--~~~~~~~~l~~~La~~~~~~~~~v~~~---~sGseA~~~Al~~ar~~~~~~~ii 185 (477)
|+.+|.+|+++. +... ...++. |.+..+..|.+-.++.+.. +..++- -|||+|+..++..... +.++++
T Consensus 25 Nq~KVL~Af~~~~vs~~hf~~tTGYGY~D~GRd~le~iyA~vfga--E~ALVRpq~vSGTHAi~~~Lfg~Lr--pGD~ll 100 (403)
T PF06838_consen 25 NQLKVLKAFQENRVSDSHFAGTTGYGYDDIGRDKLERIYADVFGA--EDALVRPQFVSGTHAIALALFGVLR--PGDELL 100 (403)
T ss_dssp HHHHHHHHHHHTT--GGGCS---TT-TT-HHHHHHHHHHHHHCT---SEEEEETTS-SHHHHHHHHHHHH----TT-EEE
T ss_pred HHHHHHHHHHHcCCChhhcCCCCcCCCCCccHHHHHHHHHHHhCc--hhhhhcccccchHHHHHHHHHhcCC--CCCeEE
Confidence 445677776552 1111 112222 3456688899999999965 445443 3899999999986654 678888
Q ss_pred EEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCC
Q 011777 186 ALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGG 265 (477)
Q Consensus 186 ~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G 265 (477)
+..|.=.-....++...+.. .......|+..-.++....+.++ .+.+++.++ .++++|.+.=.-|=.-
T Consensus 101 ~~tG~PYDTL~~VIG~~g~~--~GSL~e~Gi~Y~~v~L~~dg~~D------~~~i~~~~~----~~tk~v~IQRSrGYs~ 168 (403)
T PF06838_consen 101 SITGKPYDTLEEVIGIRGNG--PGSLKEFGIKYREVPLTEDGTID------WEAIKKALK----PNTKMVLIQRSRGYSW 168 (403)
T ss_dssp ESSSS--CCHHHHHTSSSSS--SSSTGGGT-EEEE--B-TTSSB-------HHHHHHHHH----TTEEEEEEE-S-TTSS
T ss_pred EcCCCchhhHHHHhCCCCCC--CCChHHhCceeEEEeecCCCCcC------HHHHHHhhc----cCceEEEEecCCCCCC
Confidence 87764444444444444321 11111234443333222222222 577888887 5788888755433222
Q ss_pred eeeCCchhHHHHHHHHHHh--CcEEEEcCcccCccCCCCCCccccccCCCcceee--ecccccCcc-ce-EEEEeCHHHH
Q 011777 266 AVELAPGYLKLVYDIVRKA--GGVCIADEVQTGFGRTGSHYWGFETQGVIPDIVT--MAKGIGNGL-PL-GAVVTTPEIA 339 (477)
Q Consensus 266 ~~~~~~~~l~~l~~l~~~~--gillI~DEv~~gfgr~G~~~~~~~~~gv~pDivt--~sK~lg~G~-pi-g~v~~~~~~~ 339 (477)
--..+-+.++++.+++|+. ++++.+|..|..|--+- +-..+-.|++. +=|..|||+ |. ||++++++++
T Consensus 169 R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE~~------EP~~vGADl~aGSLIKNpGGgiAptGGYIaGr~~lV 242 (403)
T PF06838_consen 169 RPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVETQ------EPTEVGADLMAGSLIKNPGGGIAPTGGYIAGRKDLV 242 (403)
T ss_dssp S----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTSSS-------GGGGT-SEEEEETTSGGGTTT-SS-EEEEESHHHH
T ss_pred CCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceecccc------CccccchhheeccceeCCCCCccCcCCEEechHHHH
Confidence 1223445566666666654 78999999998774332 33345668774 559999985 44 7999999999
Q ss_pred Hhhcc
Q 011777 340 NVMAQ 344 (477)
Q Consensus 340 ~~~~~ 344 (477)
+....
T Consensus 243 e~~a~ 247 (403)
T PF06838_consen 243 ERAAY 247 (403)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 87654
No 383
>PRK12566 glycine dehydrogenase; Provisional
Probab=98.05 E-value=0.0033 Score=69.04 Aligned_cols=271 Identities=13% Similarity=0.105 Sum_probs=149.4
Q ss_pred HHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccC--CceEEEEccCccCCcccccccccCCCCCCCCCCCCee
Q 011777 140 IADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTG--NLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIH 217 (477)
Q Consensus 140 ~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~--~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~ 217 (477)
..++...++++++-+..+.-....+|.+-| |+.+++.+++ +.++++ ..+-|-.+..++..... ..|+.
T Consensus 126 l~e~Qtmi~~LtGm~vaNASl~D~atA~aE-A~~ma~~~~~~k~~~~~v-~~~~hP~~~~v~~t~~~--------~~g~~ 195 (954)
T PRK12566 126 LLNFQQMTIDLTGLDLANASLLDEATAAAE-AMALAKRVAKSKSNRFFV-DEHCHPQTLSVLRTRAE--------GFGFE 195 (954)
T ss_pred HHHHHHHHHHHhCchhhhhhhccchhHHHH-HHHHHHHHhhcCCCEEEE-CCCCCHHHHHHHHHhhh--------cCCcE
Confidence 457777888887543333344556666666 4444544444 455555 44555443333322111 12444
Q ss_pred eecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEc--Ccc-
Q 011777 218 HVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIAD--EVQ- 294 (477)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~D--Ev~- 294 (477)
.+. +++++.+. +++++|++...+ .-|.+.. +++|.++++++|+++|+- =.-
T Consensus 196 i~~-----------------~~~~~~~~----~~~~~v~vq~P~-~~G~i~d----~~~i~~~~h~~gal~~~~~d~laL 249 (954)
T PRK12566 196 LVV-----------------DAVDNLAA----HAVFGALLQYPD-THGEIRD----LRPLIDQLHGQQALACVAADLLSL 249 (954)
T ss_pred EEE-----------------cchhhcCC----CCEEEEEEECCC-CceEEcc----HHHHHHHHHHcCCEEEEEeCHHHH
Confidence 331 34555443 468899885433 3455543 899999999999998732 111
Q ss_pred cCccCCCCCCccccccCCCcceee-----eccccc-CccceEEEEeCHHHHHhhcccc----------------------
Q 011777 295 TGFGRTGSHYWGFETQGVIPDIVT-----MAKGIG-NGLPLGAVVTTPEIANVMAQKI---------------------- 346 (477)
Q Consensus 295 ~gfgr~G~~~~~~~~~gv~pDivt-----~sK~lg-~G~pig~v~~~~~~~~~~~~~~---------------------- 346 (477)
+.+-..| +.-.||++ |+=.++ ||.-.|++.+++++...+..+.
T Consensus 250 ~ll~~Pg---------e~GADI~vG~~Q~fGvp~~~GGP~ag~~a~~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQ 320 (954)
T PRK12566 250 LVLTPPG---------ELGADVVLGSTQRFGVPMGYGGPHAAYFACRDDYKRAMPGRIIGVSRDARGNTALRMALQTREQ 320 (954)
T ss_pred hCCCChh---------hcCCcEEeeCCCcCCCCCCCCCCCeeeeeehHHHHhhCCCCccceeecCCCCeeeehhhhHHHH
Confidence 1111111 12347764 344444 4566889999998887775321
Q ss_pred ------cccCCCCcHHHHHHHHHHHH-hhchhhH---HHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCC
Q 011777 347 ------QFNTFGGNPVCSAGGLAVLR-VIDKERR---QAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDR 416 (477)
Q Consensus 347 ------~~~t~~~~~~~~aaa~a~l~-~l~~~~~---~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~ 416 (477)
..+..+.|...+|.+.+..- .+..+.+ -+++..+..++.++|.+. .+.... ...|--+.+.-.
T Consensus 321 HIRReKAtSNICT~qaL~A~~a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~~--g~~~~~----~~fF~~~~v~~~- 393 (954)
T PRK12566 321 HIRREKANSNICTAQVLLANIAGFYAVYHGPEGLKRIAQRVHRLTAILAAGLEAK--GIKRLN----RHFFDTLTLEVG- 393 (954)
T ss_pred HhhhccccchhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhc--CCcccc----CCccceEEEEcc-
Confidence 11233334333333222222 2233433 344555666777777663 222211 122222222111
Q ss_pred CCCCccHHHHHHHHHHHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHH
Q 011777 417 KEKTPAKAETAVLFEKLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADFLVDALD 471 (477)
Q Consensus 417 ~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~ 471 (477)
. ...++.+...++|+.++... .+.+.++.-=.+|.+|++.+++.+.
T Consensus 394 -----~--~~~~~~~~a~~~~~n~r~~~--~~~~~~s~de~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 394 -----G--AQAAIIESAEAARINLRILG--RGRLGVSLDETCDEATVARLFDIFL 439 (954)
T ss_pred -----C--CHHHHHHHHHHCCCeeEEeC--CCeEEEEeCCCCCHHHHHHHHHHhc
Confidence 0 24578888889999988653 5678898888899999999999883
No 384
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=98.03 E-value=0.00084 Score=68.91 Aligned_cols=301 Identities=17% Similarity=0.221 Sum_probs=174.2
Q ss_pred hHHHHHHHHHHhhCCCCCCEEEE-eCChHHHHHHHHHHHHhcc-----CCceEEEEccCccCCcccccccccCCCCCCCC
Q 011777 138 HAIADFAEALASKMPGNLKVVYF-VNSGTEANELAMLMARLST-----GNLGMIALRNAYHGGSSGTIGLTALNTWKYPI 211 (477)
Q Consensus 138 ~~~~~l~~~La~~~~~~~~~v~~-~~sGseA~~~Al~~ar~~~-----~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~ 211 (477)
....+|.+.|++..+ .|.+.| -|||++.-.+.++..|.|. +...|-...-+-||...+...+.
T Consensus 582 ~lf~~Le~~Lc~iTG--~D~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPASA~Ma--------- 650 (1001)
T KOG2040|consen 582 QLFTELEKDLCEITG--FDSFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPASAAMA--------- 650 (1001)
T ss_pred HHHHHHHHHhheeec--ccceeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChhhHHhc---------
Confidence 345688888888874 455555 5789999888899888873 22344445568888765544443
Q ss_pred CCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEc
Q 011777 212 PQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIAD 291 (477)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~D 291 (477)
|...+++.....+..+ +.+|+...++ +.++.+++++.-. ++-|+..+ -++++.++.++||.-+..|
T Consensus 651 ---gmkvvpV~~~~~G~id------~~dLk~kaek-h~~~Laa~MvTYP-ST~GvfE~---~i~d~cd~iHehGGQVYlD 716 (1001)
T KOG2040|consen 651 ---GMKVVPVGCDANGNID------MVDLKAKAEK-HKDNLAALMVTYP-STHGVFEE---GIDDICDIIHEHGGQVYLD 716 (1001)
T ss_pred ---CCEEEEeeccCCCCcc------HHHHHHHHHH-hhhhhheeEEecc-cccccccc---cHHHHHHHHHhcCCEEEec
Confidence 3333333222222222 4666665553 3567888777643 44454433 3788999999999999999
Q ss_pred Cc----ccCccCCCCCCcccc--ccCCCcceeeecccccC-ccceEEEEeCHHHHHhhccc-----------ccccCCC-
Q 011777 292 EV----QTGFGRTGSHYWGFE--TQGVIPDIVTMAKGIGN-GLPLGAVVTTPEIANVMAQK-----------IQFNTFG- 352 (477)
Q Consensus 292 Ev----~~gfgr~G~~~~~~~--~~gv~pDivt~sK~lg~-G~pig~v~~~~~~~~~~~~~-----------~~~~t~~- 352 (477)
-+ |-|+.|.| .++.+ |..+. -||.=.-|| |..+|-+.+++.++..+..- .-.++.+
T Consensus 717 GANMNAqVGlc~pG--d~GaDV~HLNLH---KTFcIPHGGGGPg~gPIgVK~HLapfLP~HpVvs~~~~~~~~~~gsVsa 791 (1001)
T KOG2040|consen 717 GANMNAQVGLCRPG--DIGADVCHLNLH---KTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSPGRPEDTSPVGSVSA 791 (1001)
T ss_pred CCCccceecccCCc--cccccceeeccc---ceeeecCCCCCCCCCccchhhhccccCCCCCccCCCCCCCCCCccceec
Confidence 75 66777777 22222 11110 033333344 56777777777766554321 0112222
Q ss_pred ---CcHHHHHHHHHHHHhhchhhHH---HHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeC-CCCCCccHHH
Q 011777 353 ---GNPVCSAGGLAVLRVIDKERRQ---AHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTD-RKEKTPAKAE 425 (477)
Q Consensus 353 ---~~~~~~aaa~a~l~~l~~~~~~---~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~-~~~~~~~~~~ 425 (477)
|+..-....++.++.+....+. +-..-+..|..++|.. .|.++. ....| .+.-+|.-| +.-|.....+
T Consensus 792 aP~Gsa~ILpISwaYikmMG~~GL~~as~~AiLNaNYMakRLe~---hYkil~-~~~~~-~vaHEFIlD~r~fK~~agie 866 (1001)
T KOG2040|consen 792 APWGSALILPISWAYIKMMGSGGLKDASKIAILNANYMAKRLES---HYKILF-RGENG-LVAHEFILDLRPFKKTAGIE 866 (1001)
T ss_pred cCCCcceeehhHHHHHHHhcccccchhhHHHhhhhHHHHHHHhh---ccceeE-ecCCc-ceeeeeeeechhhccccCCc
Confidence 2233333455677776554432 2333456677777655 344332 12223 333333211 1122223345
Q ss_pred HHHHHHHHHHcCceeeccC-CCCCEEEEeCCCCCcHHHHHHHHHHHHHH
Q 011777 426 TAVLFEKLRELGVLVGKGG-LHGNVFRIKPPMCFTKDDADFLVDALDYS 473 (477)
Q Consensus 426 ~~~~~~~l~~~Gv~v~~~~-~~~~~iRi~p~~~~t~e~i~~~l~~l~~~ 473 (477)
+..++++|.+.|....+.. +-.+.+.|-|.-.-+++|+|+++++|-.+
T Consensus 867 avDvAKRL~DYgFHaPTmswPV~gtLMIEPTESE~k~ElDRfcdAliSI 915 (1001)
T KOG2040|consen 867 AVDVAKRLMDYGFHAPTMSWPVAGTLMIEPTESEDKAELDRFCDALISI 915 (1001)
T ss_pred HHHHHHHHHhccCCCCccccccCCceEeccCccccHHHHHHHHHHHHHH
Confidence 6789999999998764321 12467889988888999999999998654
No 385
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=97.93 E-value=0.0012 Score=68.01 Aligned_cols=302 Identities=15% Similarity=0.107 Sum_probs=142.8
Q ss_pred hHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccC-CCCCCCCCCCCe
Q 011777 138 HAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTAL-NTWKYPIPQGEI 216 (477)
Q Consensus 138 ~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~-~~~~~~~~~~~~ 216 (477)
-...+..+..++.++.+ ...|.+||.|-||...+.... +.+++|++- ...|-+....+.+++. +.|..+.
T Consensus 70 G~i~eAqe~aA~~fgAd-~tyFvvNGTS~ank~vi~a~~--~~GD~VLvd-RN~HKSi~~glilaGa~Pvyl~p~----- 140 (557)
T COG1982 70 GPIKEAQELAARVFGAD-HTYFVVNGTSTANKAVINAVL--TPGDKVLVD-RNCHKSIHHGLILAGATPVYLEPS----- 140 (557)
T ss_pred ccHHHHHHHHHHHhCCC-ceEEEECCccHHHHHHHHhhc--CCCCEEEec-CCccHHHHHHHHHcCCceEEecCC-----
Confidence 34566666666777553 467778888888887776442 345555554 4455544444444432 3322211
Q ss_pred eeecCCCCcCCC-CCCCHHHHHHHHHHHHhccCCCC-eeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcc
Q 011777 217 HHVVNPDPYHGS-FGSDAARYAQDLQDHIDFGTSGK-VAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQ 294 (477)
Q Consensus 217 ~~~~~~~~~~~~-~~~~~~~~~~~le~~i~~~~~~~-~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~ 294 (477)
+.+ ++--..-..+.+++.+... +.. ..+||..|.. .|++.. +++|.+.+.++++++..||.+
T Consensus 141 ---------~np~~gi~ggI~~~~~~~~l~~~-~~~~k~~vitnpTY--dGv~~n----~~~i~~~~~~~~a~v~~deah 204 (557)
T COG1982 141 ---------RNPLYGIIGGIPLETFKEALLAH-PDAEKLAVITNPTY--DGVCYN----LRKIVELLHHYGAWVLYDEAH 204 (557)
T ss_pred ---------CCccccccCCCCHHHHHHHHHhC-hhhheeEEEecCcc--ceEeec----HHHHHHHHhhcCceEEhhhcC
Confidence 111 1110000135565555422 222 5677776633 355555 899999999999999999987
Q ss_pred cCc-cCCCCCCccccccCCCcceeeec--ccccCccceEEEEeC-------HHHHHhhcccccccCCCCcHHHHHHHHHH
Q 011777 295 TGF-GRTGSHYWGFETQGVIPDIVTMA--KGIGNGLPLGAVVTT-------PEIANVMAQKIQFNTFGGNPVCSAGGLAV 364 (477)
Q Consensus 295 ~gf-gr~G~~~~~~~~~gv~pDivt~s--K~lg~G~pig~v~~~-------~~~~~~~~~~~~~~t~~~~~~~~aaa~a~ 364 (477)
.-. +..+ ...-....-..|++|-| |.+++.---+.+-.+ +++.+.+. .+.+ -+.+...+ |.+.+
T Consensus 205 ~~~~~~~~--~l~~~~~~~~~~~~tqS~HK~l~alSQaS~iHv~~~~~~~~~r~nea~~--~h~S-TSPsY~l~-ASlD~ 278 (557)
T COG1982 205 PAHFDFSP--MLPESALNGGADFVTQSTHKLLAALSQASMIHVKDGRAVNHERFNEALM--MHQS-TSPSYPLM-ASLDV 278 (557)
T ss_pred cccccccc--cCcchhhhcCceEEEechhhhhhhhhhhHHHhhCCCccCCHHHHHHHHH--HHcc-CCchHHHH-HHHHH
Confidence 421 2222 11111122334677655 766642222333333 22333332 1222 23333322 33333
Q ss_pred HHhhch---hhHHHHHHHHHHHHHHHHHHHHHhCCCceeeeccce------eEEEEEeeCC-----CCC----C-ccHHH
Q 011777 365 LRVIDK---ERRQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGL------MVGMELVTDR-----KEK----T-PAKAE 425 (477)
Q Consensus 365 l~~l~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~------~~~i~~~~~~-----~~~----~-~~~~~ 425 (477)
-+.+.. ..+.+..-+..-.+++.+++.....+.+.. .+.+. +-|++-..++ ..| . ..+..
T Consensus 279 Ar~~~~~~G~~l~~~~~~~~i~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~whgf~~~~~~~~~lDP~Klti~tp~~Gip 357 (557)
T COG1982 279 ARMQEGNAGRELWQEVIDEAIDFRKALRRLINEIGFFPV-LQPEKLDPPTGWHGFEDYADDQYFLDPTKLTITTPEFGIP 357 (557)
T ss_pred HHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCeee-ccccccCCcccccccccccccceeccccEEEEecCCCCCc
Confidence 222222 123222223333333333333333331111 11111 1122111100 000 1 12334
Q ss_pred HHHHHHHHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHH
Q 011777 426 TAVLFEKLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADFLVDALD 471 (477)
Q Consensus 426 ~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~ 471 (477)
+..+.+.|+++|++....+...+.+-|.|.-..+..+++.+++.+.
T Consensus 358 g~~v~~~L~e~gii~e~~~d~~~lll~~~~~gk~~~lv~~L~~f~r 403 (557)
T COG1982 358 GAIVAKYLREHGIIPEETGDYSNLLLFSPGIGKWQTLVDRLLEFKR 403 (557)
T ss_pred HHHHHHHHHHcCCeeeecCCceeeEEeeeccchHHHHHHHHHHHHH
Confidence 5678889999999998877665555554432445566666666554
No 386
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=97.77 E-value=0.0016 Score=61.39 Aligned_cols=193 Identities=17% Similarity=0.226 Sum_probs=106.4
Q ss_pred cCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCC--CCCCcccccc---CCCccee--eecccccC-ccceEE
Q 011777 260 IQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRT--GSHYWGFETQ---GVIPDIV--TMAKGIGN-GLPLGA 331 (477)
Q Consensus 260 i~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~--G~~~~~~~~~---gv~pDiv--t~sK~lg~-G~pig~ 331 (477)
-++++| +-|+++.+.+|.++-++.+.+-.+|-+|.||.-. ....|+..++ | .+-++ +|+|.+|- +-|+|-
T Consensus 187 AhNPTG-mDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g-~e~fv~QSFaKNfGlYneRvGn 264 (410)
T KOG1412|consen 187 AHNPTG-MDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQG-FELFVCQSFAKNFGLYNERVGN 264 (410)
T ss_pred ccCCCC-CCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhcC-CeEEEEhhhhhhcccccccccc
Confidence 466677 7889999999999999999999999999999422 1123444332 3 22233 58999994 778773
Q ss_pred ---EEeCHHHHHhhccc---ccccCCC-CcHHHHHHHHHHHHhhch-hhH-------HHHHHHHHHHHHHHHHHHHHhCC
Q 011777 332 ---VVTTPEIANVMAQK---IQFNTFG-GNPVCSAGGLAVLRVIDK-ERR-------QAHCADVGSHLLGRLRTLQERHD 396 (477)
Q Consensus 332 ---v~~~~~~~~~~~~~---~~~~t~~-~~~~~~aaa~a~l~~l~~-~~~-------~~~~~~~~~~l~~~L~~l~~~~~ 396 (477)
++-++.++..+... ..-++++ .+..+......+|+.-+. +++ -.++.+++..|++.|..+. -|
T Consensus 265 ltvv~~n~a~i~~v~SQl~lviR~~~SNPPAyGArIV~kvL~tP~lre~W~~sik~MssRI~~MR~aLrd~L~aL~--TP 342 (410)
T KOG1412|consen 265 LTVVVNNPAVIAGVKSQLTLVIRSNWSNPPAYGARIVHKVLSTPELREQWIQSIKTMSSRIKKMRTALRDHLVALK--TP 342 (410)
T ss_pred eEEEecChhHHHHHHHHHHHHHhhccCCCcchhhHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CC
Confidence 33345555444322 1113333 333344444445543221 233 3444555555555555552 22
Q ss_pred Cc-ee-eeccceeEEEEEeeCCCCCCccHHHHHHHHHHHH-HcCceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHH
Q 011777 397 II-GD-VRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLR-ELGVLVGKGGLHGNVFRIKPPMCFTKDDADFLVDALDYS 473 (477)
Q Consensus 397 ~~-~~-v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~ 473 (477)
.- .. ++..|+|..--+ ...-++.|. ++.|+..+.| |++.+ ..+...+|....+++++
T Consensus 343 GtWDHI~~QiGMFSyTGL-------------tp~qV~~li~~h~vyLl~~G------RInis-GLN~~NveyVAkAIde~ 402 (410)
T KOG1412|consen 343 GTWDHITQQIGMFSYTGL-------------TPAQVDHLIENHKVYLLSDG------RINIS-GLNMKNVEYVAKAIDET 402 (410)
T ss_pred CcHHHHHhhccceeecCC-------------CHHHHHHHHHhceEEEecCC------cEeee-ccccccHHHHHHHHHHH
Confidence 11 11 233454432111 123344554 4577776543 45433 34567788888888877
Q ss_pred Hhh
Q 011777 474 MSK 476 (477)
Q Consensus 474 l~~ 476 (477)
.+.
T Consensus 403 Vr~ 405 (410)
T KOG1412|consen 403 VRA 405 (410)
T ss_pred HHh
Confidence 653
No 387
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=97.59 E-value=0.015 Score=58.02 Aligned_cols=322 Identities=15% Similarity=0.153 Sum_probs=156.3
Q ss_pred CHHHHHHHHHHHhhcccc-cccc--CChHHHHHHHHHHhhCCCCCC-EEEEeCChHHHHHHHHHHHHhccC------Cce
Q 011777 114 HPDVLNAIFEQSKLLQHA-TTIY--LHHAIADFAEALASKMPGNLK-VVYFVNSGTEANELAMLMARLSTG------NLG 183 (477)
Q Consensus 114 ~p~v~~Av~~~l~~~~~~-~~~~--~~~~~~~l~~~La~~~~~~~~-~v~~~~sGseA~~~Al~~ar~~~~------~~~ 183 (477)
+++..+-+.+.+.+.... ...| ......+....++.+++.+.+ -=.-|.|||||..++.|.-+.... +..
T Consensus 93 ~~~~~~l~~~~~~k~N~l~~d~fp~~~~~e~~~Vnm~~~L~~~~~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~ 172 (491)
T KOG1383|consen 93 EPELDKLIMEAYNKFNPLHPDEFPVVRKLEAECVNMIANLFNAPSDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPN 172 (491)
T ss_pred CcchhhHHHHHHhhcCccCccccchhHHHHHHHHHHHHHHhcCCccccCccccccchHHHHHHHHHHHHHHhccCCCCcc
Confidence 455555555555543111 1112 123345566666777765433 234677999998888876543221 123
Q ss_pred EEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCC-CCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCC
Q 011777 184 MIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNP-DPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQG 262 (477)
Q Consensus 184 ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~ 262 (477)
|++... -|-...-+ ..++.+ .+..+++. ..++ -| ...+.+.++ +++.+++.+-.+-
T Consensus 173 iv~~~~-v~~a~eK~-------a~yf~v---~l~~V~~~~~~~~----~D----~~k~~~~i~----eNti~lv~~~~~~ 229 (491)
T KOG1383|consen 173 IVTPQN-VHAAFEKA-------ARYFEV---ELREVPLDEGDYR----VD----PGKVVRMID----ENTIMLVGSLPNF 229 (491)
T ss_pred ccchHH-HHHHHHHH-------HhhEEE---EEEeeeccccceE----ec----HHHHHHHhc----cceEEEEEEcCCC
Confidence 333211 11000000 000000 12222221 1111 11 244555554 5677777776666
Q ss_pred CCCeeeCCchhHHHHHHHHHH-hCcEEEEcCcccCccCC-C---CCCccccccCCCcceeeecccccC-ccceEEEEeCH
Q 011777 263 VGGAVELAPGYLKLVYDIVRK-AGGVCIADEVQTGFGRT-G---SHYWGFETQGVIPDIVTMAKGIGN-GLPLGAVVTTP 336 (477)
Q Consensus 263 ~~G~~~~~~~~l~~l~~l~~~-~gillI~DEv~~gfgr~-G---~~~~~~~~~gv~pDivt~sK~lg~-G~pig~v~~~~ 336 (477)
+.|.+-+ .++|.++..+ +++.+++|..-.||--. + -..|++...++ +-+.+-+--+|- --.+|+++-+.
T Consensus 230 p~G~~e~----ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~~~fdFr~p~V-~Sisa~~HKYGl~~~G~~~vl~r~ 304 (491)
T KOG1383|consen 230 PTGEIED----VEKLADLLLEIWDIPIHVDACLGGFINPAGYLNEEEFDFRVPGV-TSISADGHKYGLAPAGSSWVLYRN 304 (491)
T ss_pred Cccchhh----HHHHHHHHHHHhCCceeecccCccccccccccCccccccCCCCc-eeEeeccceeeeeecCcEEEEEcc
Confidence 6675555 8999999988 99999999998888432 2 11233333333 222222222221 11356776653
Q ss_pred -HH-HHhhcc-------cccccCCCCc--HHHHHHHHHHHHhhchhh---HHHHHHHHHHHHHHHHHHHHHhCCCceeee
Q 011777 337 -EI-ANVMAQ-------KIQFNTFGGN--PVCSAGGLAVLRVIDKER---RQAHCADVGSHLLGRLRTLQERHDIIGDVR 402 (477)
Q Consensus 337 -~~-~~~~~~-------~~~~~t~~~~--~~~~aaa~a~l~~l~~~~---~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~ 402 (477)
++ .+++.. ...+.|.+++ ..-.++..+++=.+..++ ..+++.+....++++++++. +.. +-
T Consensus 305 k~~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~~~~lG~eGY~~~~~~ive~~~~l~egie~i~-~i~----i~ 379 (491)
T KOG1383|consen 305 KELLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWAALMSLGEEGYRENTQNIVETARKLREGIENIK-GIK----IV 379 (491)
T ss_pred cccccceEEEeccccCccccCcccccCCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccc-cce----ec
Confidence 32 222211 0111222222 233344445554444444 34566667778888887742 111 12
Q ss_pred ccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeeccCCCCCEEEEeCCCCCcHHH-HHHHHHHHHHHHhh
Q 011777 403 GRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKGGLHGNVFRIKPPMCFTKDD-ADFLVDALDYSMSK 476 (477)
Q Consensus 403 g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~-i~~~l~~l~~~l~~ 476 (477)
|...+..+-+.+ .....-++.+.|.+.|-.+..- .+...+.++.-..+..++ .|+++.-+++++++
T Consensus 380 gkp~vs~~~~~s-------~~~~i~elsd~l~~~GW~lnal-q~P~a~Hi~vt~~~~~~~~A~~~v~Di~~~~~e 446 (491)
T KOG1383|consen 380 GKPLVSFILFGS-------NDVNIFELSDLLRKKGWILNAL-QFPAAIHICVTRVHAREDVADRFVADIRKVVEE 446 (491)
T ss_pred CCCcEEEEEccC-------CccchhhhhHHHHhcCcCcccc-CCCCceEEEEEeeeccHHHHHHHHHHHHHHHHH
Confidence 222222222211 1122446788999999887543 223344444445555555 57777777777654
No 388
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=97.46 E-value=0.033 Score=53.92 Aligned_cols=210 Identities=17% Similarity=0.131 Sum_probs=108.8
Q ss_pred HHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcc-cCccCCCCCCccccccCCCcce
Q 011777 238 QDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQ-TGFGRTGSHYWGFETQGVIPDI 316 (477)
Q Consensus 238 ~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~-~gfgr~G~~~~~~~~~gv~pDi 316 (477)
+.||+.-.. -+.+.+|+-. ..-+..-...+++++|++.|++|.+|=++ +|+--.|.-...|++ .||
T Consensus 179 D~Le~~A~~---frPk~iiaG~------SaY~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey----~Di 245 (477)
T KOG2467|consen 179 DKLEKTATL---FRPKLIIAGT------SAYSRLIDYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEY----CDI 245 (477)
T ss_pred HHHHHHHHh---cCCcEEEecc------ccchhhccHHHHHHHHHhcCceeehhhhhHHHHHhcccCCCcccc----cce
Confidence 566654432 2445666522 12222233689999999999999999764 344333312223343 367
Q ss_pred eee--cccccCccceEEEEeCHHHHHh-----------hc--------ccccccCCCCcHHHHHHHHHHHHhhch---hh
Q 011777 317 VTM--AKGIGNGLPLGAVVTTPEIANV-----------MA--------QKIQFNTFGGNPVCSAGGLAVLRVIDK---ER 372 (477)
Q Consensus 317 vt~--sK~lg~G~pig~v~~~~~~~~~-----------~~--------~~~~~~t~~~~~~~~aaa~a~l~~l~~---~~ 372 (477)
||. -|++-| .|-|.+..++.+... +. +..+++.++....+.|. +|+.... ..
T Consensus 246 VTTTTHKsLRG-PRg~mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAv---ALkQa~tpefk~ 321 (477)
T KOG2467|consen 246 VTTTTHKSLRG-PRGAMIFYRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNHTIAALAV---ALKQAMTPEFKE 321 (477)
T ss_pred eeccccccccC-CcceeEEEeccCCcCCCCCCCcceechhhhhhhhccccccCCCCcchHHHHHH---HHHhhCCHHHHH
Confidence 754 488875 344666665532211 11 11233333333333333 3443333 34
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCceeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcCceeecc-------CC
Q 011777 373 RQAHCADVGSHLLGRLRTLQERHDIIGDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELGVLVGKG-------GL 445 (477)
Q Consensus 373 ~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~-------~~ 445 (477)
.++++.++.+.|.++|.+. .+.++..-. ...++.+++.... -++...+.+.+.+ +|.+... ..
T Consensus 322 Yq~qV~~Nakala~~l~~~--Gy~lvtgGT-DnHlvLvDLr~~G----~dGarvE~vle~~---~I~~NKNtvpGD~Sal 391 (477)
T KOG2467|consen 322 YQKQVLKNAKALASALISR--GYKLVTGGT-DNHLVLVDLRPKG----VDGARVEKVLELC---HIALNKNTVPGDKSAL 391 (477)
T ss_pred HHHHHHHHHHHHHHHHHHc--CceEecCCc-cceEEEEeccccC----CchHHHHHHHHHh---hhhhcCCcCCCCcccc
Confidence 5677777788888877665 333332211 2345566664321 2333444444433 3333211 12
Q ss_pred CCCEEEEeCCCCC----cHHHHHHHHHHHHHHH
Q 011777 446 HGNVFRIKPPMCF----TKDDADFLVDALDYSM 474 (477)
Q Consensus 446 ~~~~iRi~p~~~~----t~e~i~~~l~~l~~~l 474 (477)
..+-||+..|..+ .++|.++..+-|++++
T Consensus 392 ~PgGiRiGtPAmTsRG~~e~df~~v~~fi~~av 424 (477)
T KOG2467|consen 392 SPGGIRIGTPAMTSRGFGEEDFEKVADFIDRAV 424 (477)
T ss_pred CCCceeccchhhcccCccHHHHHHHHHHHHHHH
Confidence 2345899776655 4678888877777665
No 389
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=97.41 E-value=0.014 Score=58.18 Aligned_cols=221 Identities=20% Similarity=0.139 Sum_probs=110.6
Q ss_pred HHHHHHHhcc-CCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCcccccc-----C
Q 011777 238 QDLQDHIDFG-TSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFETQ-----G 311 (477)
Q Consensus 238 ~~le~~i~~~-~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~~~-----g 311 (477)
+.|+++|++. ..+-+-.+++-+ .|++|.. .-+.|.+|..+|+++|++|++|.+|+|- .+.++.+ |
T Consensus 220 ~~L~~AIe~D~arGlIPf~v~at-~GTT~~c--a~D~l~elg~Vc~~~glWLHVDAAYAGs------a~iCpE~r~l~rG 290 (511)
T KOG0628|consen 220 DTLRKAIEEDIARGLIPFFVCAT-LGTTSSC--AFDELEELGPVCREEGLWLHVDAAYAGS------AFICPEFRYLMRG 290 (511)
T ss_pred HHHHHHHHHHHhCCCccEEEEEe-ecCcccc--ccccHHHhcchhhhcCEEEEeehhhccc------cccCHHHHHHhhc
Confidence 6677777632 234455555544 4666543 3455999999999999999999999853 2222211 2
Q ss_pred C-Ccceee--eccccc-----------CccceE-EEEeCHHHHHhhcccc-cccCCCCcHHH----HHHHHHHHHhhchh
Q 011777 312 V-IPDIVT--MAKGIG-----------NGLPLG-AVVTTPEIANVMAQKI-QFNTFGGNPVC----SAGGLAVLRVIDKE 371 (477)
Q Consensus 312 v-~pDivt--~sK~lg-----------~G~pig-~v~~~~~~~~~~~~~~-~~~t~~~~~~~----~aaa~a~l~~l~~~ 371 (477)
+ ..|-.. .+|.+- .|..+. +.-+.+...+.-.... .-.-++.=|++ ..=..-+++.+.-+
T Consensus 291 ie~aDSfn~n~hK~~~vnfDCs~lWvkd~~~~~~~~~vdp~yL~h~~~~~~~Dyrhwqipl~rRfRSLKlWfv~R~~Gve 370 (511)
T KOG0628|consen 291 IEYADSFNFNPHKWLLVNFDCSPLWVKDGTKLSRAFNVDPLYLKHAYQGSAPDYRHWQIPLGRRFRSLKLWFVLRSYGVE 370 (511)
T ss_pred chhhccccCChhheeEEeeeeecceeecCceeeeeeecChHhhcchhhccCCCccccccccccchhhHHHHHHHHHHhHH
Confidence 2 123221 234332 232222 2222222221111100 00111111222 22222345555557
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCCc--eeeeccceeEEEEEeeCCCCCCccHHHHHHHHHHHHHcC-ceeeccCCCCC
Q 011777 372 RRQAHCADVGSHLLGRLRTLQERHDII--GDVRGRGLMVGMELVTDRKEKTPAKAETAVLFEKLRELG-VLVGKGGLHGN 448 (477)
Q Consensus 372 ~~~~~~~~~~~~l~~~L~~l~~~~~~~--~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~G-v~v~~~~~~~~ 448 (477)
++++++++..+ |.+.+.++..+-+.. ...+-.|+. .+.+.. .......+.+++...| |.+.+....+.
T Consensus 371 ~lq~~iR~h~~-La~~fe~lv~~d~~FE~~~~~~lgLv-cFRlk~-------~N~~ne~Ll~~in~~g~i~l~~~~l~gk 441 (511)
T KOG0628|consen 371 NLQNYIREHVR-LAKEFETLVRADPRFEIVNKRILGLV-CFRLKG-------DNEINEALLNRLNSSGRIHLVPASLHGK 441 (511)
T ss_pred HHHHHHHHHHH-HHHHHHHHhhcCCcceeeccccccee-EEeecC-------CcHHHHHHHHHHHhcCcEEEEEeeecce
Confidence 77777776543 334444443332221 222223332 333322 1234566777776655 77777654443
Q ss_pred -EEEEeCCCC-CcHHHHHHHHHHHHHHHhh
Q 011777 449 -VFRIKPPMC-FTKDDADFLVDALDYSMSK 476 (477)
Q Consensus 449 -~iRi~p~~~-~t~e~i~~~l~~l~~~l~~ 476 (477)
+|||....- .+++||++.-+.|.+....
T Consensus 442 ~vlRf~V~s~~t~~~di~~a~~~I~~~a~~ 471 (511)
T KOG0628|consen 442 FVLRFAVCSPLTNESDIDEAWKIIFEAADE 471 (511)
T ss_pred EEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Confidence 578865544 4678899998888776543
No 390
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=96.98 E-value=0.012 Score=56.34 Aligned_cols=215 Identities=20% Similarity=0.235 Sum_probs=108.5
Q ss_pred ceeEEeeeccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccccC-ChHHHHHHHHHHhhC-CCC--
Q 011777 79 PLNIVEGKMQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIYL-HHAIADFAEALASKM-PGN-- 154 (477)
Q Consensus 79 p~~~~~g~G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~~-~~~~~~l~~~La~~~-~~~-- 154 (477)
|.-+-=|-|.| .|.+|+.|+ -|.|++|=++.+.... .-.|. -....++.+.-+++. +.+
T Consensus 52 ~~KiNLgvGaY-Rdd~gKp~v--------------L~~VrkAE~ql~~~~l--dKEYlpI~Gl~eF~k~sakLa~G~~s~ 114 (427)
T KOG1411|consen 52 PKKINLGVGAY-RDDNGKPYV--------------LPSVRKAEQQLASLSL--DKEYLPITGLAEFNKLSAKLALGDNSP 114 (427)
T ss_pred cceeeecccce-ecCCCCeee--------------eHHHHHHHHHHhhhcc--cchhccccchHHHHHHHHHHhhcCCch
Confidence 44455577777 477888774 2556666544333110 01121 112334444433332 111
Q ss_pred ---CCEEEE--eCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCC
Q 011777 155 ---LKVVYF--VNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSF 229 (477)
Q Consensus 155 ---~~~v~~--~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (477)
.+++.+ |-|||-|+-.+-.....+-+...|.+.++++-.+.. .....+. .+....+.++..+.+
T Consensus 115 ~ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~-if~~ag~----------~~~~yrYyd~~t~gl 183 (427)
T KOG1411|consen 115 VIKEKRIVTVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKN-IFKDAGL----------PVKFYRYYDPKTRGL 183 (427)
T ss_pred hhhccceeEEEeccCcchhhHHHHHHHhhccccceeecCCcccccCc-cccccCc----------ceeeeeecccccccc
Confidence 234433 447888877766654444456678888887632211 1111111 111111111111111
Q ss_pred CCCHHHHHHHHHHHHhccCCCCeeEEEecc-cCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCC---CCc
Q 011777 230 GSDAARYAQDLQDHIDFGTSGKVAGFIAET-IQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGS---HYW 305 (477)
Q Consensus 230 ~~~~~~~~~~le~~i~~~~~~~~a~vi~ep-i~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~---~~~ 305 (477)
|....++++.+ ..++. .|++-. -++++| +-|+++.+++|.++.++.+.+-++|-+|.||. .|+ ..+
T Consensus 184 --d~~g~ledl~~----~p~gs--~ilLhaCaHNPTG-vDPt~eqw~ki~~~~~~k~~~pffDmAYQGfa-SG~~d~DA~ 253 (427)
T KOG1411|consen 184 --DFKGMLEDLGE----APEGS--IILLHACAHNPTG-VDPTKEQWEKISDLIKEKNLLPFFDMAYQGFA-SGDLDKDAQ 253 (427)
T ss_pred --chHHHHHHHhc----CCCCc--EEEeehhhcCCCC-CCccHHHHHHHHHHhhhccccchhhhhhcccc-cCCchhhHH
Confidence 11111223222 21222 333333 555666 78899999999999999999999999999994 331 111
Q ss_pred ccccc---CCCccee--eecccccC-ccceEEE
Q 011777 306 GFETQ---GVIPDIV--TMAKGIGN-GLPLGAV 332 (477)
Q Consensus 306 ~~~~~---gv~pDiv--t~sK~lg~-G~pig~v 332 (477)
+..++ |.. -++ +++|.+|- |-|+|++
T Consensus 254 avR~F~~~g~~-~~laQSyAKNMGLYgERvGa~ 285 (427)
T KOG1411|consen 254 AVRLFVEDGHE-ILLAQSYAKNMGLYGERVGAL 285 (427)
T ss_pred HHHHHHHcCCc-eEeehhhhhhcchhhhcccee
Confidence 11111 221 122 58899994 7788865
No 391
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=96.29 E-value=0.099 Score=49.45 Aligned_cols=211 Identities=16% Similarity=0.130 Sum_probs=116.5
Q ss_pred CCHHHHHHHHHHHhhcccc---ccc-cCChHHHHHHHHHHhhCCCCCC--EEEEeCChHHHHHHHHHHHHhccCCceEEE
Q 011777 113 CHPDVLNAIFEQSKLLQHA---TTI-YLHHAIADFAEALASKMPGNLK--VVYFVNSGTEANELAMLMARLSTGNLGMIA 186 (477)
Q Consensus 113 ~~p~v~~Av~~~l~~~~~~---~~~-~~~~~~~~l~~~La~~~~~~~~--~v~~~~sGseA~~~Al~~ar~~~~~~~ii~ 186 (477)
|..+|.+|.++.--.-.|. +.. |.+-.+..|.+-.++.++.... +..| -|||.|+..|+.-.+. +++.++.
T Consensus 36 Nq~kVL~AF~~~rvs~~hf~~stGYGydD~GRdtLe~vyA~vf~aE~a~VRpq~-isGTHAI~~aLfg~LR--pgDell~ 112 (416)
T COG4100 36 NQKKVLEAFRHHRVSESHFTGSTGYGYDDLGRDTLERVYAQVFGAEAALVRPQI-ISGTHAIACALFGILR--PGDELLY 112 (416)
T ss_pred HHHHHHHHHHhcccchhccCCCCCCCccccchhHHHHHHHHHhccccceeeeee-ecchhHHHHHHHhccC--CCCeEEE
Confidence 4456677665532211221 122 2334477888888888865322 2323 4799999999875543 6777877
Q ss_pred EccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCe
Q 011777 187 LRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGA 266 (477)
Q Consensus 187 ~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~ 266 (477)
..|.=.-.....+.+.+...- .....++..-.+|....+..+ .+.++..++ ++++.|.+.-.-|-.--
T Consensus 113 i~G~PYDTLeevIG~rg~~~g--SL~dfgi~Y~~v~Lt~~gkiD------~~~v~~~i~----~~tkli~IQRS~GY~~R 180 (416)
T COG4100 113 ITGSPYDTLEEVIGLRGEGQG--SLKDFGIKYKAVPLTADGKID------IQAVKTAIS----DRTKLIGIQRSKGYAWR 180 (416)
T ss_pred ecCCcchhHHHHhccCCCCcc--cHHHhCcceeecccccCCccc------HHHHHHhcC----ccceEEEEEeccCcCCC
Confidence 766443333333333332110 011112222111111111111 356666665 57788876553332211
Q ss_pred eeCCchhHHHHHHHHHHh--CcEEEEcCcccCccCCCCCCccccccCCCccee--eecccccCcc--ceEEEEeCHHHHH
Q 011777 267 VELAPGYLKLVYDIVRKA--GGVCIADEVQTGFGRTGSHYWGFETQGVIPDIV--TMAKGIGNGL--PLGAVVTTPEIAN 340 (477)
Q Consensus 267 ~~~~~~~l~~l~~l~~~~--gillI~DEv~~gfgr~G~~~~~~~~~gv~pDiv--t~sK~lg~G~--pig~v~~~~~~~~ 340 (477)
-..+-+.++++.++.|+- ++++.+|..|..|--+- +-..+-.|++ ++=|..|||+ --||+.+++++.+
T Consensus 181 pS~~I~eI~~~i~~vk~inpn~ivFVDNCYGEFvE~~------EPt~vGaDliAGSLIKNpGGgiaktGGYiaGk~~~ve 254 (416)
T COG4100 181 PSLSIAEIEEMITFVKEINPNVIVFVDNCYGEFVEEK------EPTHVGADLIAGSLIKNPGGGIAKTGGYIAGKAELVE 254 (416)
T ss_pred CcccHHHHHHHHHHHHhcCCCEEEEEeccchhhhhcc------CccccchhhhccceeeCCCCceeeccceeechHHHHH
Confidence 112335567777777764 78999999998774322 2234556777 4669999885 3479999999988
Q ss_pred hhcc
Q 011777 341 VMAQ 344 (477)
Q Consensus 341 ~~~~ 344 (477)
....
T Consensus 255 ~~~y 258 (416)
T COG4100 255 AAAY 258 (416)
T ss_pred hhce
Confidence 7653
No 392
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=96.15 E-value=0.025 Score=49.06 Aligned_cols=73 Identities=12% Similarity=0.069 Sum_probs=52.1
Q ss_pred HHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCC----CCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCc
Q 011777 116 DVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMP----GNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAY 191 (477)
Q Consensus 116 ~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~----~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~y 191 (477)
.+++++.+ +. .+....+..+.++.+++.+.+..+ .+.++|++|+|+++|++.+++.... +++.|++.++.|
T Consensus 77 ~i~~~~~~-~a--~Y~~~~G~~~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~d--pGD~VlVp~P~Y 151 (153)
T PLN02994 77 GTIDSFKD-IA--LFQDYHGLANFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIAD--PGDAFLVPTPYY 151 (153)
T ss_pred HHHHHHHH-Hh--cCCCCCCcHHHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHcC--CCCEEEEeCCCC
Confidence 44555544 21 133333456778888888877654 3567899999999999998886643 678899999999
Q ss_pred cC
Q 011777 192 HG 193 (477)
Q Consensus 192 hG 193 (477)
+|
T Consensus 152 ~~ 153 (153)
T PLN02994 152 AA 153 (153)
T ss_pred CC
Confidence 75
No 393
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=91.90 E-value=20 Score=38.16 Aligned_cols=44 Identities=9% Similarity=0.087 Sum_probs=33.4
Q ss_pred HHHHHHHHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHH
Q 011777 426 TAVLFEKLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADFLVDALD 471 (477)
Q Consensus 426 ~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~ 471 (477)
.+++.....++++-++... .+.|-++.--+.+++|+|.++..+.
T Consensus 435 ~~~~l~rA~~~~iNlr~~e--d~tigvslDETv~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 435 AEEVLDRAAKRQINLRLVE--DGTIGVSLDETVTEKDVDDLLWVFN 478 (1001)
T ss_pred HHHHHHHHHhhcCceEEee--cCceEEeecccccHHHHHHHHHHHc
Confidence 5677777778888776532 4667787777889999999998875
No 394
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=90.89 E-value=2 Score=40.07 Aligned_cols=55 Identities=11% Similarity=0.007 Sum_probs=37.6
Q ss_pred HHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCccc
Q 011777 237 AQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQT 295 (477)
Q Consensus 237 ~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~ 295 (477)
++.+++.++..+++-+-+|...+. -..+-.++-+++|..+|..|+++-|+..+|.
T Consensus 143 leav~~~iee~g~dcilci~stts----cfapr~pd~leaiaaica~~diphivnnayg 197 (432)
T KOG3843|consen 143 LEAVEAIIEELGEDCILCIHSTTS----CFAPRSPDNLEAIAAICAAHDIPHIVNNAYG 197 (432)
T ss_pred HHHHHHHHHHhCCceEEEEeeccc----ccCCCCCchHHHHHHHHHccCchhhhccccc
Confidence 566777777554444444433221 1234466779999999999999999998763
No 395
>KOG1465 consensus Translation initiation factor 2B, beta subunit (eIF-2Bbeta/GCD7) [Translation, ribosomal structure and biogenesis]
Probab=78.24 E-value=54 Score=31.55 Aligned_cols=114 Identities=13% Similarity=0.088 Sum_probs=64.0
Q ss_pred CEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHH
Q 011777 156 KVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAAR 235 (477)
Q Consensus 156 ~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (477)
..|+.|.|.|-.++.-++.|+....+-.||+.++ +.....-.++. +..+.|+....+|+
T Consensus 163 nEviLT~g~SrTV~~FL~~A~kk~Rkf~viVaE~-~p~~qgH~~Ak--------~la~~giettVI~d------------ 221 (353)
T KOG1465|consen 163 NEVILTLGSSRTVENFLKHAAKKGRKFRVIVAEG-APNNQGHELAK--------PLAQAGIETTVIPD------------ 221 (353)
T ss_pred CceEEecCccHHHHHHHHHHHhccCceEEEEeec-CCcccchHhhH--------HHHHcCCeeEEecc------------
Confidence 4699999999999999998876433445555443 22211000000 01112444333333
Q ss_pred HHHHHHHHHhccCCCCeeEEEec-ccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCC
Q 011777 236 YAQDLQDHIDFGTSGKVAGFIAE-TIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTG 301 (477)
Q Consensus 236 ~~~~le~~i~~~~~~~~a~vi~e-pi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G 301 (477)
..+-.++.+. + +.||.. .+..+||.+.+.- -..+...+|+|-+++|+= +|+....
T Consensus 222 --aaVfA~MsrV--n--KVIigt~avl~NGgl~~~~G--~~~vAlaAk~h~vPv~Vl---Ap~yKLs 277 (353)
T KOG1465|consen 222 --AAVFAMMSRV--N--KVIIGTHAVLANGGLRAPSG--VHTVALAAKHHSVPVIVL---APMYKLS 277 (353)
T ss_pred --HHHHHHhhhc--c--eEEEEeeeEecCCCeeccch--HHHHHHHHHhcCCcEEEe---cchhhcC
Confidence 3455555421 1 233333 3778888666544 456777889999999864 4665443
No 396
>KOG2433 consensus Uncharacterized conserved protein [Function unknown]
Probab=60.83 E-value=28 Score=34.64 Aligned_cols=63 Identities=17% Similarity=0.220 Sum_probs=38.7
Q ss_pred CCHHHHHHHHHHHhhccc--cccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhc
Q 011777 113 CHPDVLNAIFEQSKLLQH--ATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLS 178 (477)
Q Consensus 113 ~~p~v~~Av~~~l~~~~~--~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~ 178 (477)
.|.+|.+|+.+.-++... .+..+. .-.|+.--|.+++..+ .++++++||+|-.+.+-.+|+.+
T Consensus 434 tHrEiQqaLvdi~DKpA~FVGSrQWI--GStEis~vLn~ll~~~-skil~v~sGaEva~~~rELA~HF 498 (577)
T KOG2433|consen 434 THREIQQALVDIQDKPAKFVGSRQWI--GSTEISFVLNELLKLE-SKILAVNSGAEVAERVRELARHF 498 (577)
T ss_pred cHHHHHHHHHhccCcccceeccccee--cchhHHHHHHHHhccc-eEEEEeccccHHHHHHHHHHHHh
Confidence 466888887775554221 011111 1124444455666443 57999999999999988888764
No 397
>cd01522 RHOD_1 Member of the Rhodanese Homology Domain superfamily, subgroup 1. This CD includes the putative rhodanese-related sulfurtransferases of several uncharacterized proteins.
Probab=60.75 E-value=35 Score=27.74 Aligned_cols=52 Identities=17% Similarity=0.251 Sum_probs=33.9
Q ss_pred HHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccc
Q 011777 145 EALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGT 198 (477)
Q Consensus 145 ~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~ 198 (477)
..+....+.+..-|++|.+|..|...+..+.. .|-..+..+.++|-++....
T Consensus 55 ~~l~~~~~~~~~ivv~C~~G~rs~~aa~~L~~--~G~~~v~~l~gG~~~~~~~~ 106 (117)
T cd01522 55 AELEEKVGKDRPVLLLCRSGNRSIAAAEAAAQ--AGFTNVYNVLEGFEGDLDAA 106 (117)
T ss_pred HHHHhhCCCCCeEEEEcCCCccHHHHHHHHHH--CCCCeEEECcCceecCCCCC
Confidence 33333333344467888888888777666543 36777888889998875544
No 398
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
Probab=55.69 E-value=27 Score=31.30 Aligned_cols=56 Identities=14% Similarity=0.215 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHhccCCCCeeEEEecccCCC----CC-eeeCCchhHHHHHHHHHHhCcEEE
Q 011777 234 ARYAQDLQDHIDFGTSGKVAGFIAETIQGV----GG-AVELAPGYLKLVYDIVRKAGGVCI 289 (477)
Q Consensus 234 ~~~~~~le~~i~~~~~~~~a~vi~epi~~~----~G-~~~~~~~~l~~l~~l~~~~gillI 289 (477)
..+.+.++++++.........|++.|.... .+ ....-..|-+.++++|+++|+.++
T Consensus 90 ~~~~~nl~~ii~~~~~~~~~~il~tp~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v 150 (198)
T cd01821 90 TTYKEYLRRYIAEARAKGATPILVTPVTRRTFDEGGKVEDTLGDYPAAMRELAAEEGVPLI 150 (198)
T ss_pred HHHHHHHHHHHHHHHHCCCeEEEECCccccccCCCCcccccchhHHHHHHHHHHHhCCCEE
Confidence 445567777776433345567777764311 11 112334677899999999998875
No 399
>smart00642 Aamy Alpha-amylase domain.
Probab=54.19 E-value=32 Score=30.20 Aligned_cols=47 Identities=17% Similarity=-0.070 Sum_probs=34.0
Q ss_pred CCeeEEEecccCCCCC-------e----------eeCCchhHHHHHHHHHHhCcEEEEcCcccC
Q 011777 250 GKVAGFIAETIQGVGG-------A----------VELAPGYLKLVYDIVRKAGGVCIADEVQTG 296 (477)
Q Consensus 250 ~~~a~vi~epi~~~~G-------~----------~~~~~~~l~~l~~l~~~~gillI~DEv~~g 296 (477)
-.+.+|.+.|++.... . ..-+.+.++++.+-|+++|+-+|+|=|...
T Consensus 31 lG~~~I~l~Pi~~~~~~~~~~~gY~~~d~~~i~~~~Gt~~d~~~lv~~~h~~Gi~vilD~V~NH 94 (166)
T smart00642 31 LGVTAIWLSPIFESPQGYPSYHGYDISDYKQIDPRFGTMEDFKELVDAAHARGIKVILDVVINH 94 (166)
T ss_pred CCCCEEEECcceeCCCCCCCCCCcCccccCCCCcccCCHHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 3577888888754331 0 111346789999999999999999988763
No 400
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.
Probab=46.49 E-value=32 Score=29.82 Aligned_cols=55 Identities=7% Similarity=0.094 Sum_probs=31.1
Q ss_pred HHHHHHHHHHhccCCCCeeEEEecccC-CCCCeeeCCchhHHHHHHHHHHhCcEEEE
Q 011777 235 RYAQDLQDHIDFGTSGKVAGFIAETIQ-GVGGAVELAPGYLKLVYDIVRKAGGVCIA 290 (477)
Q Consensus 235 ~~~~~le~~i~~~~~~~~a~vi~epi~-~~~G~~~~~~~~l~~l~~l~~~~gillI~ 290 (477)
.+.+.++++++.........|++.+.. ...+ ......+-+.+.++|+++++.++-
T Consensus 85 ~~~~~l~~li~~~~~~~~~vil~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~~~~d 140 (177)
T cd01822 85 QTRANLRQMIETAQARGAPVLLVGMQAPPNYG-PRYTRRFAAIYPELAEEYGVPLVP 140 (177)
T ss_pred HHHHHHHHHHHHHHHCCCeEEEEecCCCCccc-hHHHHHHHHHHHHHHHHcCCcEec
Confidence 345666666664322345566665422 2212 122345667788999999987663
No 401
>PLN02672 methionine S-methyltransferase
Probab=45.44 E-value=1.3e+02 Score=34.69 Aligned_cols=120 Identities=13% Similarity=-0.011 Sum_probs=58.9
Q ss_pred CCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCC
Q 011777 152 PGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGS 231 (477)
Q Consensus 152 ~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (477)
|-..++|++.+|-..|+|.++++ +.++-.++--.-+-|-...+..++..............+..+..|. .
T Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~- 515 (1082)
T PLN02672 446 PLTPDNVVVFPSRAVAIENALRL---FSPRLAIVDEHLTRWLPKKWLTSLAIENATSDSKSDDVITVIEAPR------Q- 515 (1082)
T ss_pred cCCccceEEeccHHHHHHHHHHh---hChHHHhhhhhhhccCCHHHHhHhhhhcccccCccCCeEEEEeCCC------c-
Confidence 44567899999999999999985 3333222110001111111211111110000001111222222221 1
Q ss_pred CHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCc
Q 011777 232 DAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEV 293 (477)
Q Consensus 232 ~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv 293 (477)
.+.+.++|++. ++..|+.---+.+. -+-.-++.|.+.+++-|+.|+.|+.
T Consensus 516 -----~~~~~~~~~~~---~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 565 (1082)
T PLN02672 516 -----SDLVIELIKKL---KPQVVVTGMADFEM----RTSTAFEHLLNVTAEIGARLFLDIS 565 (1082)
T ss_pred -----chHHHHHHHhC---CCeEEEEeccchhh----hhHHHHHHHHHHHHhhCcEEEEehh
Confidence 14455666633 33444443333332 2333478999999999999999975
No 402
>COG0108 RibB 3,4-dihydroxy-2-butanone 4-phosphate synthase [Coenzyme metabolism]
Probab=44.53 E-value=27 Score=31.44 Aligned_cols=36 Identities=25% Similarity=0.284 Sum_probs=27.9
Q ss_pred CCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEE
Q 011777 250 GKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIA 290 (477)
Q Consensus 250 ~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~ 290 (477)
-..++||||-++-.|+ ... .+++.+++++||+.+|.
T Consensus 155 l~Pa~VicEi~~~dG~-mar----~~~~~~fa~~h~l~~it 190 (203)
T COG0108 155 LKPAGVICEIMNDDGT-MAR----LPELEEFAKEHGLPVIT 190 (203)
T ss_pred CCCcEEEEEEeCCCcc-ccC----hHHHHHHHHHcCCcEEE
Confidence 3568999998766544 444 68889999999999884
No 403
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=43.06 E-value=25 Score=37.75 Aligned_cols=32 Identities=31% Similarity=0.347 Sum_probs=29.2
Q ss_pred CchhHHHHHHHHHHhCcEEEEcCcccCccCCC
Q 011777 270 APGYLKLVYDIVRKAGGVCIADEVQTGFGRTG 301 (477)
Q Consensus 270 ~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G 301 (477)
+++.++++++-|+++||-+|+|=|+..|+..|
T Consensus 212 tPedfk~fVD~aH~~GIgViLD~V~~HF~~d~ 243 (628)
T COG0296 212 TPEDFKALVDAAHQAGIGVILDWVPNHFPPDG 243 (628)
T ss_pred CHHHHHHHHHHHHHcCCEEEEEecCCcCCCCc
Confidence 56789999999999999999999999998765
No 404
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=40.97 E-value=67 Score=31.32 Aligned_cols=24 Identities=25% Similarity=0.415 Sum_probs=21.9
Q ss_pred CCchhHHHHHHHHHHhCcEEEEcC
Q 011777 269 LAPGYLKLVYDIVRKAGGVCIADE 292 (477)
Q Consensus 269 ~~~~~l~~l~~l~~~~gillI~DE 292 (477)
.+.+++.+|.++|++.|+.+|+|-
T Consensus 143 ~~~d~y~~li~~~~~~g~~vilD~ 166 (310)
T COG1105 143 VPPDAYAELIRILRQQGAKVILDT 166 (310)
T ss_pred CCHHHHHHHHHHHHhcCCeEEEEC
Confidence 377899999999999999999994
No 405
>PF12138 Spherulin4: Spherulation-specific family 4; InterPro: IPR021986 This protein is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 250 and 398 amino acids in length. There is a conserved NPG sequence motif and there are two completely conserved G residues that may be functionally important. Starvation will often induce spherulation - the production of spores - and this process may involve DNA-methylation. Changes in the methylation of spherulin4 are associated with the formation of spherules, but these changes are probably transient. Methylation of the gene accompanies its transcriptional activation, and spherulin4 mRNA is only detectable in late spherulating cultures and mature spherules. It is a spherulation-specific protein.
Probab=40.21 E-value=66 Score=30.44 Aligned_cols=51 Identities=18% Similarity=0.085 Sum_probs=37.3
Q ss_pred HHHHHHHhccCCCCeeEEEecccCCCCCe--eeCCchhHHHHHHHHHHhCcEEE
Q 011777 238 QDLQDHIDFGTSGKVAGFIAETIQGVGGA--VELAPGYLKLVYDIVRKAGGVCI 289 (477)
Q Consensus 238 ~~le~~i~~~~~~~~a~vi~epi~~~~G~--~~~~~~~l~~l~~l~~~~gillI 289 (477)
+.|.+++.. ++...-.+|++|.+|+|.. -.|...|...|.+|-+..|+.+|
T Consensus 19 ~~l~~a~~~-~p~~~f~vIiNP~sGPG~~~~~~pd~~Y~~~i~~L~~~~nv~vl 71 (253)
T PF12138_consen 19 DPLYDAIAA-HPSVPFTVIINPNSGPGSAPDPWPDANYAAAIPRLNSYANVRVL 71 (253)
T ss_pred HHHHHHHhc-CCCCcEEEEEcCCCCCCCCCCCCCCHHHHHHHHHHHhcCCCcEE
Confidence 345555653 3445578999999999843 34899999999999777777666
No 406
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
Probab=38.14 E-value=62 Score=29.66 Aligned_cols=93 Identities=17% Similarity=0.116 Sum_probs=50.5
Q ss_pred HHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCccc---CccCCCCCCccccccCCC
Q 011777 237 AQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQT---GFGRTGSHYWGFETQGVI 313 (477)
Q Consensus 237 ~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~---gfgr~G~~~~~~~~~gv~ 313 (477)
++.+|++++ .+-+...+-|-....- . ..+..++++++|++||+.+|+++=.. ..+-.| -|.|-.
T Consensus 24 ~~~ve~al~---~Gv~~vQlR~K~~~~~---~-~~~~a~~~~~lc~~~~v~liINd~~dlA~~~~AdG------VHlGq~ 90 (211)
T COG0352 24 LEWVEAALK---GGVTAVQLREKDLSDE---E-YLALAEKLRALCQKYGVPLIINDRVDLALAVGADG------VHLGQD 90 (211)
T ss_pred HHHHHHHHh---CCCeEEEEecCCCChH---H-HHHHHHHHHHHHHHhCCeEEecCcHHHHHhCCCCE------EEcCCc
Confidence 366777776 2333444444332211 1 13556799999999999999876321 111112 111211
Q ss_pred -cceeeecccccCccceEEEEeCHHHHHhh
Q 011777 314 -PDIVTMAKGIGNGLPLGAVVTTPEIANVM 342 (477)
Q Consensus 314 -pDivt~sK~lg~G~pig~v~~~~~~~~~~ 342 (477)
-.+-...|-++.++.+|+-+-+.+-....
T Consensus 91 D~~~~~ar~~~~~~~iIG~S~h~~eea~~A 120 (211)
T COG0352 91 DMPLAEARELLGPGLIIGLSTHDLEEALEA 120 (211)
T ss_pred ccchHHHHHhcCCCCEEEeecCCHHHHHHH
Confidence 11223446677788888877776544443
No 407
>PF13481 AAA_25: AAA domain; PDB: 1G8Y_J 1OLO_A 1NLF_C.
Probab=37.92 E-value=45 Score=29.59 Aligned_cols=52 Identities=10% Similarity=0.086 Sum_probs=28.3
Q ss_pred HHHHHHHHhccCCCCeeEEEecccCCCCCeeeCC----chhHHHHHHHHHHhCcEEEE
Q 011777 237 AQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELA----PGYLKLVYDIVRKAGGVCIA 290 (477)
Q Consensus 237 ~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~----~~~l~~l~~l~~~~gillI~ 290 (477)
.+.+++.+... .++..||++|.+.-.+.-.-. ..+++.+.++|+++|+.+|+
T Consensus 129 ~~~l~~~~~~~--~~~~lvviD~l~~~~~~~~~~~~~~~~~~~~l~~la~~~~~~vi~ 184 (193)
T PF13481_consen 129 LEELEAALKEL--YGPDLVVIDPLQSLHDGDENSNSAVAQLMQELKRLAKEYGVAVIL 184 (193)
T ss_dssp HHHHHHHHTT------SEEEEE-GGGG--S-TT-HHHHHHHHHHHHHHHHHH--EEEE
T ss_pred HHHHHHHHhhc--CCCcEEEEcCHHHHhcCCCCCHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 34555555521 457899999976543221111 35788999999999987764
No 408
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=37.73 E-value=4.2e+02 Score=26.26 Aligned_cols=52 Identities=12% Similarity=0.207 Sum_probs=31.1
Q ss_pred HHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCcc
Q 011777 141 ADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYH 192 (477)
Q Consensus 141 ~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yh 192 (477)
.++.+++.+.-....+-++-.+||-++..++-.+...+.-+...+.+++++.
T Consensus 46 ~~l~~~~k~~~~~~yD~iV~lSGGkDSs~la~ll~~~~gl~~l~vt~~~~~~ 97 (343)
T TIGR03573 46 EELVDKIKKKGGGRYDCIIGVSGGKDSTYQAHVLKKKLGLNPLLVTVDPGWN 97 (343)
T ss_pred HHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHHHhCCceEEEEECCCCC
Confidence 3444444443222278899999999999887555444433333356666553
No 409
>cd00158 RHOD Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and certain stress proteins such as senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions (no active site cysteine) are also seen in dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases, where they are believed to play a regulatory role in multidomain proteins.
Probab=37.46 E-value=74 Score=23.60 Aligned_cols=40 Identities=18% Similarity=0.285 Sum_probs=28.5
Q ss_pred CCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCC
Q 011777 153 GNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGG 194 (477)
Q Consensus 153 ~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~ 194 (477)
.+..-|+++++|..|...+-.+... |...+.+++|+|.++
T Consensus 49 ~~~~vv~~c~~~~~a~~~~~~l~~~--G~~~v~~l~gG~~~w 88 (89)
T cd00158 49 KDKPIVVYCRSGNRSARAAKLLRKA--GGTNVYNLEGGMLAW 88 (89)
T ss_pred CCCeEEEEeCCCchHHHHHHHHHHh--CcccEEEecCChhhc
Confidence 3445678888888887777665543 567788888888664
No 410
>PRK10886 DnaA initiator-associating protein DiaA; Provisional
Probab=37.39 E-value=1.9e+02 Score=26.10 Aligned_cols=17 Identities=6% Similarity=-0.027 Sum_probs=14.9
Q ss_pred HHHHHHHHHHhCcEEEE
Q 011777 274 LKLVYDIVRKAGGVCIA 290 (477)
Q Consensus 274 l~~l~~l~~~~gillI~ 290 (477)
+.++.+.++++|+.+|.
T Consensus 125 v~~a~~~Ak~~G~~vI~ 141 (196)
T PRK10886 125 IVKAVEAAVTRDMTIVA 141 (196)
T ss_pred HHHHHHHHHHCCCEEEE
Confidence 77888999999999884
No 411
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of a biosynthetic gene cluster and may participate in the biosynthesis of long-chain N-acyltyrosines by providing saturated and unsaturated fatty acids, which it turn are loaded onto the acyl carrier protein FeeL. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=36.86 E-value=2.9e+02 Score=24.14 Aligned_cols=30 Identities=20% Similarity=0.351 Sum_probs=16.6
Q ss_pred HHHHHHHhhCCCCCCEEEEeCChHHHHHHH
Q 011777 142 DFAEALASKMPGNLKVVYFVNSGTEANELA 171 (477)
Q Consensus 142 ~l~~~La~~~~~~~~~v~~~~sGseA~~~A 171 (477)
.+++.|.+..+.+.+..-+.-+|..+-+..
T Consensus 28 ~l~~~l~~~~~~~~~~~n~g~~G~t~~~~~ 57 (191)
T cd01836 28 QLARGLAAITGRGVRWRLFAKTGATSADLL 57 (191)
T ss_pred HHHHHHHHhhCCceEEEEEecCCcCHHHHH
Confidence 355555555443445555666777665543
No 412
>COG0648 Nfo Endonuclease IV [DNA replication, recombination, and repair]
Probab=36.74 E-value=1.2e+02 Score=29.23 Aligned_cols=43 Identities=16% Similarity=0.163 Sum_probs=34.9
Q ss_pred eEEEecccCCCCCeeeCCchhHHHHHHHHHHhC-cEEEEcCccc
Q 011777 253 AGFIAETIQGVGGAVELAPGYLKLVYDIVRKAG-GVCIADEVQT 295 (477)
Q Consensus 253 a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~g-illI~DEv~~ 295 (477)
.-+++|.+-|.|..+.-.-+.|++|.+++++.+ +-+.+|=.++
T Consensus 136 v~i~~e~~agegs~~g~~F~~L~eii~~~~~~~~igvCiDtcH~ 179 (280)
T COG0648 136 VIILLENTAGEGSGKGTQFGELAEIIDLIEEKERIGVCIDTCHA 179 (280)
T ss_pred CeEEEEEeccccCccccchhhHHHHHHhhcccCceEEEEEchhh
Confidence 456667777777667777788999999999988 9999997776
No 413
>PRK08535 translation initiation factor IF-2B subunit delta; Provisional
Probab=36.37 E-value=3.4e+02 Score=26.46 Aligned_cols=138 Identities=14% Similarity=0.155 Sum_probs=67.9
Q ss_pred HHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEcc--Ccc
Q 011777 115 PDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRN--AYH 192 (477)
Q Consensus 115 p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~--~yh 192 (477)
.++.+.+.+.++..... .......+++.-.+++.. ..+++|.|-|..++..++.|....++-+|++.+. .+.
T Consensus 86 ~~~k~~l~e~~~~~~~e----~~~~~~~I~~~a~~~i~~--g~~ILT~~~S~tv~~~l~~A~~~~k~~~V~v~EsrP~~~ 159 (310)
T PRK08535 86 EEARESVIERAEEFIES----SENAVEKIGEIGAKRIRD--GDVIMTHCNSSAALSVIKTAHEQGKDIEVIATETRPRNQ 159 (310)
T ss_pred HHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHcCC--CCEEEEeCCcHHHHHHHHHHHHCCCeEEEEEecCCchhh
Confidence 55566565555442210 112233444444555543 2366777777778888877654434456666543 222
Q ss_pred CCcccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEE--ecccCCCCCeeeCC
Q 011777 193 GGSSGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFI--AETIQGVGGAVELA 270 (477)
Q Consensus 193 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi--~epi~~~~G~~~~~ 270 (477)
|. ..+..+. ..|+....+++ ..+-.++. ++-.|+ .+-+..+||.+. .
T Consensus 160 G~-~~a~~L~----------~~GI~vtlI~D--------------sav~~~m~-----~vd~VivGAd~v~~nG~v~n-k 208 (310)
T PRK08535 160 GH-ITAKELA----------EYGIPVTLIVD--------------SAVRYFMK-----DVDKVVVGADAITANGAVIN-K 208 (310)
T ss_pred HH-HHHHHHH----------HCCCCEEEEeh--------------hHHHHHHH-----hCCEEEECccEEecCCCEEe-H
Confidence 21 1111111 12333322222 23333443 233344 455777777554 3
Q ss_pred chhHHHHHHHHHHhCcEEEE
Q 011777 271 PGYLKLVYDIVRKAGGVCIA 290 (477)
Q Consensus 271 ~~~l~~l~~l~~~~gillI~ 290 (477)
-+- -.+.-+|+.|++++++
T Consensus 209 iGT-~~~A~~Ak~~~vPv~V 227 (310)
T PRK08535 209 IGT-SQIALAAHEARVPFMV 227 (310)
T ss_pred HhH-HHHHHHHHHhCCCEEE
Confidence 332 3556688999999885
No 414
>TIGR00511 ribulose_e2b2 ribose-1,5-bisphosphate isomerase, e2b2 family. The delineation of this family was based originally, in part, on a discussion and neighbor-joining phylogenetic study by Kyrpides and Woese of archaeal and other proteins homologous to the alpha, beta, and delta subunits of eukaryotic initiation factor 2B (eIF-2B), a five-subunit molecule that catalyzes GTP recycling for eIF-2. Recently, Sato, et al. assigned the function ribulose-1,5 bisphosphate isomerase.
Probab=36.08 E-value=3.8e+02 Score=26.07 Aligned_cols=116 Identities=16% Similarity=0.133 Sum_probs=58.6
Q ss_pred HHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEcc--CccCCcccccccccCCCCCCCCCCCCeee
Q 011777 141 ADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRN--AYHGGSSGTIGLTALNTWKYPIPQGEIHH 218 (477)
Q Consensus 141 ~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~--~yhG~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (477)
..+++.-.+++..+ .+++|.|-|..+...++.|....++-+|++.+. .+.|.. .+..+. ..|+..
T Consensus 103 ~~I~~~a~~~i~~g--~~ILT~~~S~tv~~~l~~a~~~~~~f~V~v~EsrP~~~G~~-~a~~L~----------~~gI~v 169 (301)
T TIGR00511 103 ERIGEIGAKRIRDG--DVVMTHCNSEAALSVIKTAFEQGKDIEVIATETRPRKQGHI-TAKELR----------DYGIPV 169 (301)
T ss_pred HHHHHHHHHHcCCC--CEEEEECCcHHHHHHHHHHHHcCCcEEEEEecCCCcchHHH-HHHHHH----------HCCCCE
Confidence 34444445555442 366777766677777776655444556666543 222211 111111 113332
Q ss_pred ecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEE--ecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEE
Q 011777 219 VVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFI--AETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIA 290 (477)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi--~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~ 290 (477)
..+++ ..+-.++. ++-.|+ .|-+..+||.+. .-+- -.+.-+|+.|++++++
T Consensus 170 tlI~D--------------sa~~~~m~-----~vd~VivGad~v~~nG~v~n-kiGT-~~lA~~Ak~~~vPv~V 222 (301)
T TIGR00511 170 TLIVD--------------SAVRYFMK-----EVDHVVVGADAITANGALIN-KIGT-SQLALAAREARVPFMV 222 (301)
T ss_pred EEEeh--------------hHHHHHHH-----hCCEEEECccEEecCCCEEE-HHhH-HHHHHHHHHhCCCEEE
Confidence 22222 22333343 233333 466777777554 3333 3566689999998885
No 415
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=35.50 E-value=76 Score=27.71 Aligned_cols=56 Identities=13% Similarity=0.135 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHhcc--CCCCeeEEEecccCCCCCee---------eCCchhHHHHHHHHHHhCcEEE
Q 011777 234 ARYAQDLQDHIDFG--TSGKVAGFIAETIQGVGGAV---------ELAPGYLKLVYDIVRKAGGVCI 289 (477)
Q Consensus 234 ~~~~~~le~~i~~~--~~~~~a~vi~epi~~~~G~~---------~~~~~~l~~l~~l~~~~gillI 289 (477)
..+.+.++++++.. .......|++.|........ ..-..+-+.++++|+++++.+|
T Consensus 85 ~~~~~~l~~~v~~~~~~~~~~~ii~~~p~~~~~~~~~~~~~~~~~~~~~~~n~~l~~~a~~~~~~~i 151 (191)
T cd01834 85 EKFKTNLRRLIDRLKNKESAPRIVLVSPIAYEANEDPLPDGAEYNANLAAYADAVRELAAENGVAFV 151 (191)
T ss_pred HHHHHHHHHHHHHHHcccCCCcEEEECCcccCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEE
Confidence 34456677766643 33455667777643322211 1122344567788999997776
No 416
>PRK00162 glpE thiosulfate sulfurtransferase; Validated
Probab=34.52 E-value=78 Score=25.07 Aligned_cols=51 Identities=8% Similarity=0.094 Sum_probs=32.7
Q ss_pred HHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCc
Q 011777 142 DFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGS 195 (477)
Q Consensus 142 ~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~ 195 (477)
++.+.+.. ++.+...+++|.+|..+..++..+.+. |-+.+..+++++.++.
T Consensus 47 ~l~~~~~~-~~~~~~ivv~c~~g~~s~~a~~~L~~~--G~~~v~~l~GG~~~w~ 97 (108)
T PRK00162 47 SLGAFMRQ-ADFDTPVMVMCYHGNSSQGAAQYLLQQ--GFDVVYSIDGGFEAWR 97 (108)
T ss_pred HHHHHHHh-cCCCCCEEEEeCCCCCHHHHHHHHHHC--CchheEEecCCHHHHH
Confidence 34444433 344456788888888877666554433 6667888888887663
No 417
>COG2515 Acd 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism]
Probab=34.46 E-value=4.5e+02 Score=25.64 Aligned_cols=31 Identities=23% Similarity=0.177 Sum_probs=25.2
Q ss_pred CeeeCCchhHHHHHHHHHHhCcEEEEcCcccCc
Q 011777 265 GAVELAPGYLKLVYDIVRKAGGVCIADEVQTGF 297 (477)
Q Consensus 265 G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gf 297 (477)
|.=.|.++.++.+..+++..|+ +.|=||+|-
T Consensus 255 ~Yg~p~~e~~e~i~~~~~~eGi--llDpVYtgK 285 (323)
T COG2515 255 GYGKPNEEDIEAIKLLARLEGI--LLDPVYTGK 285 (323)
T ss_pred ccCCcCHHHHHHHHHHHHhhCc--ccccccchH
Confidence 3345788999999999999995 679999974
No 418
>cd01444 GlpE_ST GlpE sulfurtransferase (ST) and homologs are members of the Rhodanese Homology Domain superfamily. Unlike other rhodanese sulfurtransferases, GlpE is a single domain protein but indications are that it functions as a dimer. The active site contains a catalytically active cysteine.
Probab=34.31 E-value=87 Score=23.89 Aligned_cols=42 Identities=17% Similarity=0.271 Sum_probs=29.6
Q ss_pred CCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCC
Q 011777 151 MPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGG 194 (477)
Q Consensus 151 ~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~ 194 (477)
++.+..-|++|.+|..|..++..+.+. |...+..+++++.++
T Consensus 53 ~~~~~~ivv~c~~g~~s~~a~~~l~~~--G~~~v~~l~gG~~~w 94 (96)
T cd01444 53 LDRDRPVVVYCYHGNSSAQLAQALREA--GFTDVRSLAGGFEAW 94 (96)
T ss_pred cCCCCCEEEEeCCCChHHHHHHHHHHc--CCceEEEcCCCHHHh
Confidence 444456788888998888877666554 666677888877554
No 419
>PLN02160 thiosulfate sulfurtransferase
Probab=34.00 E-value=86 Score=26.37 Aligned_cols=45 Identities=9% Similarity=0.011 Sum_probs=31.7
Q ss_pred CCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCccc
Q 011777 151 MPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSG 197 (477)
Q Consensus 151 ~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~ 197 (477)
++.+..-|++|.+|.-+..++..+... |-..+..+.|++.+|...
T Consensus 78 ~~~~~~IivyC~sG~RS~~Aa~~L~~~--G~~~v~~l~GG~~~W~~~ 122 (136)
T PLN02160 78 LNPADDILVGCQSGARSLKATTELVAA--GYKKVRNKGGGYLAWVDH 122 (136)
T ss_pred cCCCCcEEEECCCcHHHHHHHHHHHHc--CCCCeeecCCcHHHHhhC
Confidence 344446789999999888887766433 656677788888776443
No 420
>PF13407 Peripla_BP_4: Periplasmic binding protein domain; PDB: 3BRS_B 3GBP_A 3GA5_A 1GCG_A 1GCA_A 3H75_A 3D02_A 3L49_B 3EJW_B 3T95_A ....
Probab=33.88 E-value=1.2e+02 Score=27.94 Aligned_cols=44 Identities=16% Similarity=0.254 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEE
Q 011777 234 ARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIA 290 (477)
Q Consensus 234 ~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~ 290 (477)
....+.+++++. .++.+||+.|...+. +..+.+-|++.|+.+|.
T Consensus 42 ~~q~~~i~~~i~----~~~d~Iiv~~~~~~~---------~~~~l~~~~~~gIpvv~ 85 (257)
T PF13407_consen 42 EEQIEQIEQAIS----QGVDGIIVSPVDPDS---------LAPFLEKAKAAGIPVVT 85 (257)
T ss_dssp HHHHHHHHHHHH----TTESEEEEESSSTTT---------THHHHHHHHHTTSEEEE
T ss_pred HHHHHHHHHHHH----hcCCEEEecCCCHHH---------HHHHHHHHhhcCceEEE
Confidence 334567788877 458899999876643 34555668889998886
No 421
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=33.43 E-value=3.7e+02 Score=25.71 Aligned_cols=56 Identities=20% Similarity=0.083 Sum_probs=33.2
Q ss_pred ccEEEeCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhc-cc-cccccCChHHHHHHHHHHhhCC
Q 011777 87 MQYLFDENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLL-QH-ATTIYLHHAIADFAEALASKMP 152 (477)
Q Consensus 87 G~~~~d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~-~~-~~~~~~~~~~~~l~~~La~~~~ 152 (477)
-.++.|.||--|.+- ..-|...+++...-++. .+ ..+.........++++|.++..
T Consensus 9 ~~~l~DlDGvl~~G~----------~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~ 66 (269)
T COG0647 9 DGFLFDLDGVLYRGN----------EAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGG 66 (269)
T ss_pred CEEEEcCcCceEeCC----------ccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcC
Confidence 358899999888431 13467777776533331 11 1122344556779999999553
No 422
>cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue.
Probab=33.19 E-value=1.2e+02 Score=24.22 Aligned_cols=53 Identities=13% Similarity=0.140 Sum_probs=33.0
Q ss_pred HHHHHHHHHhhC-CCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCC
Q 011777 140 IADFAEALASKM-PGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGG 194 (477)
Q Consensus 140 ~~~l~~~La~~~-~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~ 194 (477)
..++.+.+.+.- ..+..-|++|++|.-|...+..+.. .|-+.+..++|++..+
T Consensus 63 ~~~~~~~~~~~~~~~~~~iv~yc~~g~~s~~~~~~l~~--~G~~~v~~l~GG~~~W 116 (118)
T cd01449 63 PEELRALFAALGITPDKPVIVYCGSGVTACVLLLALEL--LGYKNVRLYDGSWSEW 116 (118)
T ss_pred HHHHHHHHHHcCCCCCCCEEEECCcHHHHHHHHHHHHH--cCCCCeeeeCChHHHh
Confidence 345656665542 2334568888888877776655432 3656677888877554
No 423
>cd01528 RHOD_2 Member of the Rhodanese Homology Domain superfamily, subgroup 2. Subgroup 2 includes uncharacterized putative rhodanese-related domains.
Probab=32.93 E-value=1.1e+02 Score=23.80 Aligned_cols=39 Identities=15% Similarity=0.233 Sum_probs=28.6
Q ss_pred CCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCC
Q 011777 154 NLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGG 194 (477)
Q Consensus 154 ~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~ 194 (477)
+..-|++|++|..|...+..+.+. |-..+..++|++.++
T Consensus 58 ~~~vv~~c~~g~rs~~~~~~l~~~--G~~~v~~l~GG~~~w 96 (101)
T cd01528 58 DKDIVVLCHHGGRSMQVAQWLLRQ--GFENVYNLQGGIDAW 96 (101)
T ss_pred CCeEEEEeCCCchHHHHHHHHHHc--CCccEEEecCCHHHH
Confidence 345688899998887777666553 666788888888776
No 424
>PRK06371 translation initiation factor IF-2B subunit alpha; Provisional
Probab=32.55 E-value=2.1e+02 Score=28.24 Aligned_cols=38 Identities=16% Similarity=0.077 Sum_probs=24.2
Q ss_pred CeeEEE--ecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEE
Q 011777 251 KVAGFI--AETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIA 290 (477)
Q Consensus 251 ~~a~vi--~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~ 290 (477)
++-.|+ .+-+..+||++. .-+- -.+.-+|++||+++++
T Consensus 215 ~Vd~VivGAd~I~aNG~v~N-KiGT-~~lAl~Ak~~~VPfyV 254 (329)
T PRK06371 215 EIDLVIVGADRIASNGDFAN-KIGT-YEKAVLAKVNGIPFYV 254 (329)
T ss_pred CCCEEEECccEEecCCCEee-hhhH-HHHHHHHHHcCCCEEE
Confidence 344444 456777777543 3332 3566688999999985
No 425
>TIGR01305 GMP_reduct_1 guanosine monophosphate reductase, eukaryotic. A deep split separates two families of GMP reductase. This family includes both eukaryotic and some proteobacterial sequences, while the other family contains other bacterial sequences.
Probab=32.46 E-value=3.5e+02 Score=26.76 Aligned_cols=31 Identities=19% Similarity=0.092 Sum_probs=21.5
Q ss_pred eCCchhHHHHHHHHHHhCcEEEEcCcccCccCCC
Q 011777 268 ELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTG 301 (477)
Q Consensus 268 ~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G 301 (477)
.|...-+.++++.++++++.+|.|- |+.+.|
T Consensus 195 ~pqltAv~~~a~aa~~~~v~VIaDG---GIr~~g 225 (343)
T TIGR01305 195 YPQLSAVIECADAAHGLKGHIISDG---GCTCPG 225 (343)
T ss_pred cCHHHHHHHHHHHhccCCCeEEEcC---CcCchh
Confidence 3555556677777778899999995 554444
No 426
>cd01535 4RHOD_Repeat_4 Member of the Rhodanese Homology Domain superfamily, repeat 4. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 4th repeat which, in general, contains the putative catalytic Cys residue.
Probab=32.00 E-value=1.2e+02 Score=25.78 Aligned_cols=58 Identities=21% Similarity=0.150 Sum_probs=38.2
Q ss_pred HHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCccccccc
Q 011777 141 ADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGSSGTIGL 201 (477)
Q Consensus 141 ~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~~~~~~ 201 (477)
.+|.+.+.+ ++.+...|++|.+|.-|...|-.+... |..+|.+++|++.++......+
T Consensus 37 ~~l~~~l~~-l~~~~~vVv~c~~g~~a~~aa~~L~~~--G~~~v~~L~GG~~aW~~~g~pl 94 (145)
T cd01535 37 AQLAQALEK-LPAAERYVLTCGSSLLARFAAADLAAL--TVKPVFVLEGGTAAWIAAGLPV 94 (145)
T ss_pred HHHHHHHHh-cCCCCCEEEEeCCChHHHHHHHHHHHc--CCcCeEEecCcHHHHHHCCCCc
Confidence 455555655 344445788888887776665554432 5668999999999886654444
No 427
>PRK08883 ribulose-phosphate 3-epimerase; Provisional
Probab=31.42 E-value=4.2e+02 Score=24.39 Aligned_cols=51 Identities=18% Similarity=0.183 Sum_probs=26.2
Q ss_pred HHHHHHHHhccCCCCeeEEEecccCCCCC--eeeCCchhHHHHHHHHHHhC--cEEEEc
Q 011777 237 AQDLQDHIDFGTSGKVAGFIAETIQGVGG--AVELAPGYLKLVYDIVRKAG--GVCIAD 291 (477)
Q Consensus 237 ~~~le~~i~~~~~~~~a~vi~epi~~~~G--~~~~~~~~l~~l~~l~~~~g--illI~D 291 (477)
.+.++.++... +.+-.+-++| |.+| .+....+.+++++++.+++| +.+.+|
T Consensus 119 ~~~i~~~l~~~--D~vlvMtV~P--GfgGq~fi~~~lekI~~l~~~~~~~~~~~~I~vd 173 (220)
T PRK08883 119 LHHLEYIMDKV--DLILLMSVNP--GFGGQSFIPHTLDKLRAVRKMIDESGRDIRLEID 173 (220)
T ss_pred HHHHHHHHHhC--CeEEEEEecC--CCCCceecHhHHHHHHHHHHHHHhcCCCeeEEEE
Confidence 46777777621 3344444455 3344 33334444555555555554 556666
No 428
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=31.41 E-value=77 Score=27.31 Aligned_cols=56 Identities=4% Similarity=-0.014 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHhccCC--CCeeEEEecccCCC-CCe--eeCCchhHHHHHHHHHHhCcEEE
Q 011777 234 ARYAQDLQDHIDFGTS--GKVAGFIAETIQGV-GGA--VELAPGYLKLVYDIVRKAGGVCI 289 (477)
Q Consensus 234 ~~~~~~le~~i~~~~~--~~~a~vi~epi~~~-~G~--~~~~~~~l~~l~~l~~~~gillI 289 (477)
..+.+.++++++.... .....+++.+.... .+. .....++-+.++++|+++|+.+|
T Consensus 68 ~~~~~~l~~li~~~~~~~~~~~vi~~~~~p~~~~~~~~~~~~~~~n~~l~~~a~~~~~~~i 128 (169)
T cd01828 68 EDIVANYRTILEKLRKHFPNIKIVVQSILPVGELKSIPNEQIEELNRQLAQLAQQEGVTFL 128 (169)
T ss_pred HHHHHHHHHHHHHHHHHCCCCeEEEEecCCcCccCcCCHHHHHHHHHHHHHHHHHCCCEEE
Confidence 3344666666653222 34556666653332 111 11123456678899999998776
No 429
>TIGR00524 eIF-2B_rel eIF-2B alpha/beta/delta-related uncharacterized proteins. This model, eIF-2B_rel, describes half of a superfamily, where the other half consists of eukaryotic translation initiation factor 2B (eIF-2B) subunits alpha, beta, and delta. It is unclear whether the eIF-2B_rel set is monophyletic, or whether they are all more closely related to each other than to any eIF-2B subunit because the eIF-2B clade is highly derived. Members of this branch of the family are all uncharacterized with respect to function and are found in the Archaea, Bacteria, and Eukarya, although a number are described as putative translation intiation factor components. Proteins found by eIF-2B_rel include at least three clades, including a set of uncharacterized eukaryotic proteins, a set found in some but not all Archaea, and a set universal so far among the Archaea and closely related to several uncharacterized bacterial proteins.
Probab=30.59 E-value=4.6e+02 Score=25.54 Aligned_cols=38 Identities=13% Similarity=0.126 Sum_probs=24.2
Q ss_pred CeeEEE--ecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEE
Q 011777 251 KVAGFI--AETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIA 290 (477)
Q Consensus 251 ~~a~vi--~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~ 290 (477)
++-.|+ .|.+..+||.+. .-+- -.+.-+|+.|++++++
T Consensus 197 ~vd~VlvGAd~v~~nG~v~n-k~GT-~~lA~~Ak~~~vPv~V 236 (303)
T TIGR00524 197 EIDAVIVGADRIARNGDVAN-KIGT-YQLAVLAKEFRIPFFV 236 (303)
T ss_pred CCCEEEEcccEEecCCCEeE-hhhH-HHHHHHHHHhCCCEEE
Confidence 344444 456878877554 3332 3456678999999885
No 430
>cd04915 ACT_AK-Ectoine_2 ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway. This CD includes the second of two ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway found in Methylomicrobium alcaliphilum, Vibrio cholerae, and various other halotolerant or halophilic bacteria. Bacteria exposed to hyperosmotic stress accumulate organic solutes called 'compatible solutes' of which ectoine, a heterocyclic amino acid, is one. Apart from its osmotic function, ectoine also exhibits a protective effect on proteins, nucleic acids and membranes against a variety of stress factors. de novo synthesis of ectoine starts with the phosphorylation of L-aspartate and shares its first two enzymatic steps with the biosynthesis of amino acids of the aspartate family: aspartokinas
Probab=30.51 E-value=1.1e+02 Score=22.04 Aligned_cols=48 Identities=19% Similarity=0.135 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHHH
Q 011777 425 ETAVLFEKLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADFLVDALDYSM 474 (477)
Q Consensus 425 ~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l 474 (477)
...++.+.|.+.|+-+..-.....-+++ ++.+.+++.+++++.|.+.+
T Consensus 17 v~~ki~~~L~~~~I~v~~i~~~~s~~~i--s~~V~~~~~~~av~~Lh~~f 64 (66)
T cd04915 17 VLARGLAALAEAGIEPIAAHQSMRNVDV--QFVVDRDDYDNAIKALHAAL 64 (66)
T ss_pred HHHHHHHHHHHCCCCEEEEEecCCeeEE--EEEEEHHHHHHHHHHHHHHH
Confidence 4567888899999877322111233455 46788999999999998765
No 431
>cd00411 Asparaginase Asparaginase (amidohydrolase): Asparaginases are tetrameric enzymes that catalyze the hydrolysis of asparagine to aspartic acid and ammonia. In bacteria, there are two classes of amidohydrolases, one highly specific for asparagine and localised to the periplasm, and a second (asparaginase- glutaminase) present in the cytosol that hydrolyzises both asparagine and glutamine with similar specificities.
Probab=29.99 E-value=5.4e+02 Score=25.23 Aligned_cols=52 Identities=15% Similarity=0.123 Sum_probs=30.5
Q ss_pred ChHHHHHHHHHHhhCCCCCCEEEEeCC-------hHHH---HHHHHHHHHhcc--CCceEEEEcc
Q 011777 137 HHAIADFAEALASKMPGNLKVVYFVNS-------GTEA---NELAMLMARLST--GNLGMIALRN 189 (477)
Q Consensus 137 ~~~~~~l~~~La~~~~~~~~~v~~~~s-------GseA---~~~Al~~ar~~~--~~~~ii~~~~ 189 (477)
....++.+..|.-.+.. .+-|+||.+ +++| +..|+..|.... +....|+|.+
T Consensus 88 TDTmeeTA~~L~~~l~~-~kPVVlTGA~rp~~~~~sDg~~NL~~Al~~A~~~~~~~~gV~V~f~~ 151 (323)
T cd00411 88 TDTMEETAYFLSLTLEN-DKPVVLTGSMRPSTELSADGPLNLYNAVYVAANYDSRGRGVLVVFND 151 (323)
T ss_pred cccHHHHHHHHHHHhcC-CCCEEEECCCCCCCCcCcchHHHHHHHHHHHcCcccCCCeEEEEECC
Confidence 34566666666655544 355888854 6666 456666664432 3455666665
No 432
>cd01523 RHOD_Lact_B Member of the Rhodanese Homology Domain superfamily. This CD includes predicted proteins with rhodanese-like domains found N-terminal of the metallo-beta-lactamase domain.
Probab=29.97 E-value=1.1e+02 Score=23.65 Aligned_cols=41 Identities=17% Similarity=0.158 Sum_probs=27.8
Q ss_pred CCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCC
Q 011777 151 MPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGG 194 (477)
Q Consensus 151 ~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~ 194 (477)
++.+-.-|++|.+|.-+..++-.+.+. |-+ +..+.|++.++
T Consensus 58 ~~~~~~ivv~C~~G~rs~~aa~~L~~~--G~~-~~~l~GG~~~W 98 (100)
T cd01523 58 LPDDQEVTVICAKEGSSQFVAELLAER--GYD-VDYLAGGMKAW 98 (100)
T ss_pred CCCCCeEEEEcCCCCcHHHHHHHHHHc--Cce-eEEeCCcHHhh
Confidence 444445788899998887776665443 444 77788887665
No 433
>PF01008 IF-2B: Initiation factor 2 subunit family; InterPro: IPR000649 Initiation factor 2 binds to Met-tRNA, GTP and the small ribosomal subunit. The eukaryotic translation initiation factor EIF-2B is a complex made up of five different subunits, alpha, beta, gamma, delta and epsilon, and catalyses the exchange of EIF-2-bound GDP for GTP. This family includes initiation factor 2B alpha, beta and delta subunits from eukaryotes; related proteins from archaebacteria and IF-2 from prokaryotes and also contains a subfamily of proteins in eukaryotes, archaeae (e.g. Pyrococcus furiosus), or eubacteria such as Bacillus subtilis and Thermotoga maritima. Many of these proteins were initially annotated as putative translation initiation factors despite the fact that there is no evidence for the requirement of an IF2 recycling factor in prokaryotic translation initiation. Recently, one of these proteins from B. subtilis has been functionally characterised as a 5-methylthioribose-1-phosphate isomerase (MTNA) []. This enzyme participates in the methionine salvage pathway catalysing the isomerisation of 5-methylthioribose-1-phosphate to 5-methylthioribulose-1-phosphate []. The methionine salvage pathway leads to the synthesis of methionine from methylthioadenosine, the end product of the spermidine and spermine anabolism in many species.; GO: 0044237 cellular metabolic process; PDB: 1VB5_A 1T5O_D 3A11_E 3VM6_C 1W2W_A 1T9K_A 3ECS_B 2YRF_A 2YVK_B 2A0U_A ....
Probab=29.90 E-value=2.6e+02 Score=26.69 Aligned_cols=120 Identities=13% Similarity=0.039 Sum_probs=57.5
Q ss_pred HHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCc-ccccccccCCCCCCCCCCCCeeeec
Q 011777 142 DFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGS-SGTIGLTALNTWKYPIPQGEIHHVV 220 (477)
Q Consensus 142 ~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (477)
..++...+++.. ..++.|.|-|..++.+++.|.....+-+|++.+..-++.. ..+..+.. .|+....
T Consensus 96 ~I~~~~~~~I~~--~~~ILT~~~S~~v~~~l~~a~~~~~~~~V~v~es~P~~eG~~~a~~L~~----------~gi~v~~ 163 (282)
T PF01008_consen 96 KIADHASELIND--GDTILTHGYSSTVERFLLSAKKKGKKFRVIVLESRPYNEGRLMAKELAE----------AGIPVTL 163 (282)
T ss_dssp HHHHHHHCCC-T--TEEEEEES--SHHHHHHHHHHHTTEEEEEEEE--TTTTHHHTHHHHHHH----------TT-EEEE
T ss_pred HHHHHHHHhccC--CeEEEEeCCchHHHHHHHHHHHcCCeEEEEEccCCcchhhhhHHHHhhh----------cceeEEE
Confidence 344444444533 4677888888889988888765444556777664332211 11111111 1333332
Q ss_pred CCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEc
Q 011777 221 NPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIAD 291 (477)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~D 291 (477)
.++ ..+-..+.. .-+...+=.|.+..+||++- .-+- ..+.-+|+++++++++=
T Consensus 164 i~d--------------~~~~~~m~~--~vd~VliGad~v~~nG~v~n-k~Gt-~~~a~~Ak~~~vPv~v~ 216 (282)
T PF01008_consen 164 IPD--------------SAVGYVMPR--DVDKVLIGADAVLANGGVVN-KVGT-LQLALAAKEFNVPVYVL 216 (282)
T ss_dssp E-G--------------GGHHHHHHC--TESEEEEE-SEEETTS-EEE-ETTH-HHHHHHHHHTT-EEEEE
T ss_pred Eec--------------hHHHHHHHH--hCCeeEEeeeEEecCCCEee-hhhH-HHHHHHHHhhCCCEEEE
Confidence 222 234444441 01233444555878877544 4443 45566899999998853
No 434
>PRK08335 translation initiation factor IF-2B subunit alpha; Validated
Probab=29.52 E-value=5.1e+02 Score=24.82 Aligned_cols=116 Identities=16% Similarity=0.064 Sum_probs=56.7
Q ss_pred HHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEc--cCccCCcccccccccCCCCCCCCCCCCeee
Q 011777 141 ADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALR--NAYHGGSSGTIGLTALNTWKYPIPQGEIHH 218 (477)
Q Consensus 141 ~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~--~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (477)
..+++.-+++++.+ .+++|.+-|..+...++.|....++-+|++.+ +.+.|... +..+.. .|+..
T Consensus 97 ~~I~~~a~~~I~~g--~~ILTh~~S~tv~~~l~~A~~~gk~~~V~v~EsrP~~qG~~l-a~eL~~----------~GI~v 163 (275)
T PRK08335 97 REIGNIGSELIDDG--DVIITHSFSSAVLEILKTAKRKGKRFKVILTESAPDYEGLAL-ANELEF----------LGIEF 163 (275)
T ss_pred HHHHHHHHHHcCCC--CEEEEECCcHHHHHHHHHHHHcCCceEEEEecCCCchhHHHH-HHHHHH----------CCCCE
Confidence 34444445555543 35566665556777777665543445666654 33334322 222211 13332
Q ss_pred ecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEE--ecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEE
Q 011777 219 VVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFI--AETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIA 290 (477)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi--~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~ 290 (477)
..+++ ..+-.++. ++-.|+ .+-+..+|+++- .-+- -.+.-+|+.||+++++
T Consensus 164 tlI~D--------------sa~~~~m~-----~vd~VivGAD~I~~nG~v~N-KiGT-~~lA~~Ak~~~vPfyV 216 (275)
T PRK08335 164 EVITD--------------AQLGLFAK-----EATLALVGADNVTRDGYVVN-KAGT-YLLALACHDNGVPFYV 216 (275)
T ss_pred EEEec--------------cHHHHHHH-----hCCEEEECccEEecCCCEee-hhhH-HHHHHHHHHcCCCEEE
Confidence 22222 11222233 133333 455777776443 3333 3456678999999885
No 435
>cd01533 4RHOD_Repeat_2 Member of the Rhodanese Homology Domain superfamily, repeat 2. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 2nd repeat which does contain the putative catalytic Cys residue.
Probab=29.02 E-value=1.3e+02 Score=23.87 Aligned_cols=38 Identities=24% Similarity=0.148 Sum_probs=25.1
Q ss_pred CEEEEeCChHHHHHHHHHHHHhccCCce-EEEEccCccCCc
Q 011777 156 KVVYFVNSGTEANELAMLMARLSTGNLG-MIALRNAYHGGS 195 (477)
Q Consensus 156 ~~v~~~~sGseA~~~Al~~ar~~~~~~~-ii~~~~~yhG~~ 195 (477)
.-|++|.+|..+..++..+... |-+. +..+++++.++.
T Consensus 68 ~ivv~C~~G~rs~~a~~~L~~~--G~~~~v~~l~gG~~~W~ 106 (109)
T cd01533 68 PIVVNCAGRTRSIIGAQSLINA--GLPNPVAALRNGTQGWT 106 (109)
T ss_pred eEEEECCCCchHHHHHHHHHHC--CCCcceeEecCCHHHHH
Confidence 4688888998886655544332 5444 777888887653
No 436
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. Myxobacterial members of this subfamily have been reported to be involved in adventurous gliding motility.
Probab=28.11 E-value=1.1e+02 Score=26.59 Aligned_cols=55 Identities=11% Similarity=0.133 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeC-------CchhHHHHHHHHHHhCcEEE
Q 011777 234 ARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVEL-------APGYLKLVYDIVRKAGGVCI 289 (477)
Q Consensus 234 ~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~-------~~~~l~~l~~l~~~~gillI 289 (477)
.++.+.++++++..+......+++.+...... -.. -..+-+.++++|+++++.++
T Consensus 88 ~~~~~~~~~~i~~i~~~~~~vil~~~~~~~~~-~~~~~~~~~~~~~~n~~l~~~a~~~~v~~v 149 (185)
T cd01832 88 DTYRADLEEAVRRLRAAGARVVVFTIPDPAVL-EPFRRRVRARLAAYNAVIRAVAARYGAVHV 149 (185)
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEecCCCcccc-chhHHHHHHHHHHHHHHHHHHHHHcCCEEE
Confidence 34456677777644334556677765332010 000 12345678899999997665
No 437
>cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=27.34 E-value=1.3e+02 Score=26.21 Aligned_cols=55 Identities=7% Similarity=0.127 Sum_probs=28.8
Q ss_pred HHHHHHHHHHhccCCCCeeEEEecccCCCCCeee--------CCchhHHHHHHHHHHhCcEEE
Q 011777 235 RYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVE--------LAPGYLKLVYDIVRKAGGVCI 289 (477)
Q Consensus 235 ~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~--------~~~~~l~~l~~l~~~~gillI 289 (477)
.+.+.++++++.........|++.|.....-... .-..+-+.+.++|+++++.+|
T Consensus 80 ~~~~~~~~li~~~~~~~~~~il~~~~p~~~~~~~~~~~~~~~~~~~~n~~~~~~a~~~~v~~v 142 (183)
T cd04501 80 MIKDNIRSMVELAEANGIKVILASPLPVDDYPWKPQWLRPANKLKSLNRWLKDYARENGLLFL 142 (183)
T ss_pred HHHHHHHHHHHHHHHCCCcEEEEeCCCcCccccchhhcchHHHHHHHHHHHHHHHHHcCCCEE
Confidence 3456666666543233445566655322111111 112455668899999886665
No 438
>cd01534 4RHOD_Repeat_3 Member of the Rhodanese Homology Domain superfamily, repeat 3. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 3rd repeat which does not contain the putative catalytic Cys residue.
Probab=27.34 E-value=1.5e+02 Score=22.68 Aligned_cols=36 Identities=19% Similarity=0.262 Sum_probs=25.5
Q ss_pred CEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCC
Q 011777 156 KVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGG 194 (477)
Q Consensus 156 ~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~ 194 (477)
.-|++|.+|..+...+..+.. .|-+ +..++|++.++
T Consensus 58 ~iv~~c~~G~rs~~aa~~L~~--~G~~-v~~l~GG~~~W 93 (95)
T cd01534 58 RIVLADDDGVRADMTASWLAQ--MGWE-VYVLEGGLAAA 93 (95)
T ss_pred eEEEECCCCChHHHHHHHHHH--cCCE-EEEecCcHHHh
Confidence 468888889888777666533 2555 77788888665
No 439
>COG3964 Predicted amidohydrolase [General function prediction only]
Probab=26.93 E-value=72 Score=30.84 Aligned_cols=67 Identities=19% Similarity=0.423 Sum_probs=42.0
Q ss_pred HHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCccCCCCCCcccc------ccC
Q 011777 238 QDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTGSHYWGFE------TQG 311 (477)
Q Consensus 238 ~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~~~~~------~~g 311 (477)
+++.+.+. .+++ |.--.+|-++.+..+.+.+....+.|++.|+ |+|--+. + .-|++. ..|
T Consensus 200 dEvlerL~---~GDI---itHcfngkpn~~l~~dg~vr~~vrra~erGV--~fD~ghG-----~-asfsf~vAr~aia~G 265 (386)
T COG3964 200 DEVLERLR---RGDI---ITHCFNGKPNTILTDDGVVRAEVRRARERGV--IFDAGHG-----R-ASFSFNVARRAIANG 265 (386)
T ss_pred HHHHHhcc---CCce---eeeeccCCCCCccccchhHHHHHHHHHhcce--EEEccCC-----c-ceeeHHHHHHHHhcC
Confidence 44444444 3443 3334566677788889999999999999995 6674332 2 234443 247
Q ss_pred CCcceee
Q 011777 312 VIPDIVT 318 (477)
Q Consensus 312 v~pDivt 318 (477)
+-||+++
T Consensus 266 llP~~IS 272 (386)
T COG3964 266 LLPDIIS 272 (386)
T ss_pred CCcceee
Confidence 7787764
No 440
>TIGR00789 flhB_rel flhB C-terminus-related protein. This model describes a short protein (80-93 residues) homologous to the C-terminus of the flagellar biosynthetic protein FlhB. It is found so far only in species that also have FlhB. In a phylogenetic tree based on alignment of both this family and the homologous region of FlhB and its homologs, the members of this family form a monophyletic set.
Probab=26.78 E-value=55 Score=24.99 Aligned_cols=22 Identities=18% Similarity=0.215 Sum_probs=19.2
Q ss_pred HHHHHHHHHHhCcEEEEcCccc
Q 011777 274 LKLVYDIVRKAGGVCIADEVQT 295 (477)
Q Consensus 274 l~~l~~l~~~~gillI~DEv~~ 295 (477)
-++|+++++++|++++.|..-.
T Consensus 29 A~~I~~~A~e~~VPi~~~~~LA 50 (82)
T TIGR00789 29 AERIIEIAKKHGIPIVEDPDLV 50 (82)
T ss_pred HHHHHHHHHHcCCCEEeCHHHH
Confidence 4799999999999999998643
No 441
>cd01524 RHOD_Pyr_redox Member of the Rhodanese Homology Domain superfamily. Included in this CD are the Lactococcus lactis NADH oxidase, Bacillus cereus NADH dehydrogenase, and Bacteroides thetaiotaomicron pyridine nucleotide-disulphide oxidoreductase, and similar rhodanese-like domains found C-terminal of the pyridine nucleotide-disulphide oxidoreductase (Pyr-redox) domain and the Pyr-redox dimerization domain.
Probab=26.62 E-value=2.2e+02 Score=21.41 Aligned_cols=48 Identities=15% Similarity=0.298 Sum_probs=29.6
Q ss_pred HHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCC
Q 011777 143 FAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGG 194 (477)
Q Consensus 143 l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~ 194 (477)
+.+.+.. ++.+..-|++|.+|..+...+.++.+. |. .+..++|++-++
T Consensus 41 ~~~~~~~-~~~~~~vvl~c~~g~~a~~~a~~L~~~--G~-~v~~l~GG~~~w 88 (90)
T cd01524 41 LRDRLNE-LPKDKEIIVYCAVGLRGYIAARILTQN--GF-KVKNLDGGYKTY 88 (90)
T ss_pred HHHHHHh-cCCCCcEEEEcCCChhHHHHHHHHHHC--CC-CEEEecCCHHHh
Confidence 4444433 333445688888887777776655433 55 688888877544
No 442
>PF07905 PucR: Purine catabolism regulatory protein-like family; InterPro: IPR012914 This domain is found in the purine catabolism regulatory protein expressed by Bacillus subtilis (PucR, O32138 from SWISSPROT). PucR is thought to be a transcriptional regulator of genes involved in the purine degradation pathway, and may contain a LysR-like DNA-binding domain. It is similar to LysR-type regulators in that it represses its own expression []. The other members of this family are also putative regulatory proteins.
Probab=26.43 E-value=1.1e+02 Score=25.27 Aligned_cols=44 Identities=16% Similarity=0.067 Sum_probs=27.4
Q ss_pred HHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEE
Q 011777 240 LQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIA 290 (477)
Q Consensus 240 le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~ 290 (477)
+.+.++......++++++.....-. -.| +++.++|++++++||.
T Consensus 61 ~~~~i~~L~~~~~agL~i~~~~~~~--~iP-----~~~i~~A~~~~lPli~ 104 (123)
T PF07905_consen 61 LREFIRELAEKGAAGLGIKTGRYLD--EIP-----EEIIELADELGLPLIE 104 (123)
T ss_pred HHHHHHHHHHCCCeEEEEeccCccc--cCC-----HHHHHHHHHcCCCEEE
Confidence 3444433233577888876532211 222 7889999999999983
No 443
>PLN03244 alpha-amylase; Provisional
Probab=26.16 E-value=80 Score=34.92 Aligned_cols=32 Identities=19% Similarity=0.151 Sum_probs=27.8
Q ss_pred CchhHHHHHHHHHHhCcEEEEcCcccCccCCC
Q 011777 270 APGYLKLVYDIVRKAGGVCIADEVQTGFGRTG 301 (477)
Q Consensus 270 ~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G 301 (477)
+++.|+.+++.|++.|+-||.|=|+..++..+
T Consensus 439 TPeDLK~LVD~aH~~GI~VILDvV~NH~~~d~ 470 (872)
T PLN03244 439 TPDDFKRLVDEAHGLGLLVFLDIVHSYAAADE 470 (872)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEecCccCCCcc
Confidence 46679999999999999999999998887543
No 444
>COG0742 N6-adenine-specific methylase [DNA replication, recombination, and repair]
Probab=26.02 E-value=2.1e+02 Score=25.64 Aligned_cols=83 Identities=20% Similarity=0.181 Sum_probs=42.9
Q ss_pred eCCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHH
Q 011777 92 DENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELA 171 (477)
Q Consensus 92 d~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~A 171 (477)
..+|.++||+++|.|+ || .||+.+.+..... ..-......-+.+.+... .......++-+... .+
T Consensus 41 ~i~g~~~LDlFAGSGa--LG------lEAlSRGA~~~~~--vE~~~~a~~~l~~N~~~l-~~~~~~~~~~~da~----~~ 105 (187)
T COG0742 41 EIEGARVLDLFAGSGA--LG------LEALSRGAARVVF--VEKDRKAVKILKENLKAL-GLEGEARVLRNDAL----RA 105 (187)
T ss_pred ccCCCEEEEecCCccH--hH------HHHHhCCCceEEE--EecCHHHHHHHHHHHHHh-CCccceEEEeecHH----HH
Confidence 4789999999999984 33 3555443332110 011123344555554433 32223334444333 33
Q ss_pred HHHHHhccCC--ceEEEEccCcc
Q 011777 172 MLMARLSTGN--LGMIALRNAYH 192 (477)
Q Consensus 172 l~~ar~~~~~--~~ii~~~~~yh 192 (477)
++ ...++ -++|..+|-||
T Consensus 106 L~---~~~~~~~FDlVflDPPy~ 125 (187)
T COG0742 106 LK---QLGTREPFDLVFLDPPYA 125 (187)
T ss_pred HH---hcCCCCcccEEEeCCCCc
Confidence 33 22333 67888888887
No 445
>TIGR03772 anch_rpt_subst anchored repeat ABC transporter, substrate-binding protein. Members of this protein family are ABC transporter permease subunits as identified by pfam00950, but additionally contain the Actinobacterial insert domain described by TIGR03769. Some homologs (lacking the insert) have been described as transporters of manganese or of chelated iron. Members of this family typically are found along with an ATP-binding cassette protein, a permease, and an LPXTG-anchored protein with two or three copies of the TIGR03769 insert that occurs just once in this protein family.
Probab=25.67 E-value=6.2e+02 Score=26.46 Aligned_cols=43 Identities=14% Similarity=0.006 Sum_probs=28.9
Q ss_pred HHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEE
Q 011777 238 QDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCI 289 (477)
Q Consensus 238 ~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI 289 (477)
.+|.++++..+..++.+|++||..+.- .+.+..++++.|+.+.
T Consensus 407 ~~L~~Li~~IK~~~V~~IF~Epq~~~~---------~~~l~~IA~e~Gv~V~ 449 (479)
T TIGR03772 407 ADRRRLTRTIENLKVPAVFLEPNLAAR---------STTLNEIADELGVRVC 449 (479)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCCCc---------hHHHHHHHHHcCCcEE
Confidence 455555544446789999999976531 3456778889998653
No 446
>cd01018 ZntC Metal binding protein ZntC. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and bind their specific ligands in the cleft between these domains. In addition, many of these proteins possess a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=25.64 E-value=5.7e+02 Score=24.08 Aligned_cols=123 Identities=12% Similarity=0.104 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhhccccccccCChHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCCc
Q 011777 116 DVLNAIFEQSKLLQHATTIYLHHAIADFAEALASKMPGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGGS 195 (477)
Q Consensus 116 ~v~~Av~~~l~~~~~~~~~~~~~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~~ 195 (477)
.+.+++.+.+.+..-....+...-...+.++|.+ +...++-.....++..++++.++|.-..
T Consensus 123 ~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~L~~------------------l~~~~~~~~~~~~~~~~v~~H~af~Y~~ 184 (266)
T cd01018 123 IMAENIYEALAELDPQNATYYQANLDALLAELDA------------------LDSEIRTILSKLKQRAFMVYHPAWGYFA 184 (266)
T ss_pred HHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHH------------------HHHHHHHHHhcCCCCeEEEECchhHHHH
Q ss_pred ccccccccCCCCCCCCCCCCeeeecCCCCcCCCCCCCHHHHHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHH
Q 011777 196 SGTIGLTALNTWKYPIPQGEIHHVVNPDPYHGSFGSDAARYAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLK 275 (477)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~ 275 (477)
... |+..+....+-..+-. .+|.++++..+..++.+|++||..+ -+
T Consensus 185 ~~y----------------gl~~~~~~~~~~eps~-------~~l~~l~~~ik~~~v~~if~e~~~~-----------~~ 230 (266)
T cd01018 185 RDY----------------GLTQIPIEEEGKEPSP-------ADLKRLIDLAKEKGVRVVFVQPQFS-----------TK 230 (266)
T ss_pred HHc----------------CCEEEecCCCCCCCCH-------HHHHHHHHHHHHcCCCEEEEcCCCC-----------cH
Q ss_pred HHHHHHHHhCcEEEE
Q 011777 276 LVYDIVRKAGGVCIA 290 (477)
Q Consensus 276 ~l~~l~~~~gillI~ 290 (477)
.+..++++.|+-++.
T Consensus 231 ~~~~la~~~g~~v~~ 245 (266)
T cd01018 231 SAEAIAREIGAKVVT 245 (266)
T ss_pred HHHHHHHHcCCeEEE
No 447
>TIGR02981 phageshock_pspE phage shock operon rhodanese PspE. Members of this very narrowly defined protein family are proteins active as rhodanese (EC 2.8.1.1) and found in the extended variants of the phage shock protein (psp operon) in Escherichia coli and a few closely related species. Note that the designation phage shock protein PspE has been applied, incorrectly, in many instances where the genome lacks the phage shock regulon entirely.
Probab=25.34 E-value=2.2e+02 Score=22.53 Aligned_cols=50 Identities=16% Similarity=0.254 Sum_probs=28.5
Q ss_pred HHHHHHHhhCCC-CCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCC
Q 011777 142 DFAEALASKMPG-NLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGG 194 (477)
Q Consensus 142 ~l~~~La~~~~~-~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~ 194 (477)
++.+.+.+..+. +..-+++|.+|..+...+..+... |-..+.. .+++..+
T Consensus 45 ~l~~~l~~~~~~~~~~vvlyC~~G~rS~~aa~~L~~~--G~~~v~~-~GG~~~~ 95 (101)
T TIGR02981 45 EIKEHIATAVPDKNDTVKLYCNAGRQSGMAKDILLDM--GYTHAEN-AGGIKDI 95 (101)
T ss_pred HHHHHHHHhCCCCCCeEEEEeCCCHHHHHHHHHHHHc--CCCeEEe-cCCHHHh
Confidence 444455444322 223468899999888887665543 5445544 3555443
No 448
>cd00984 DnaB_C DnaB helicase C terminal domain. The hexameric helicase DnaB unwinds the DNA duplex at the chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis.
Probab=24.91 E-value=1.9e+02 Score=26.64 Aligned_cols=41 Identities=7% Similarity=-0.026 Sum_probs=27.5
Q ss_pred CCeeEEEecccCCCC-CeeeCCc-----hhHHHHHHHHHHhCcEEEE
Q 011777 250 GKVAGFIAETIQGVG-GAVELAP-----GYLKLVYDIVRKAGGVCIA 290 (477)
Q Consensus 250 ~~~a~vi~epi~~~~-G~~~~~~-----~~l~~l~~l~~~~gillI~ 290 (477)
.++..|++++++.-- +.....+ .+++.|.++|+++|+.+|+
T Consensus 122 ~~~~~vvID~l~~l~~~~~~~~~~~~~~~~~~~L~~la~~~~~~ii~ 168 (242)
T cd00984 122 HGLGLIVIDYLQLMSGSKKKGNRQQEVAEISRSLKLLAKELNVPVIA 168 (242)
T ss_pred cCCCEEEEcCchhcCCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEE
Confidence 367899999976431 1100111 3578899999999998885
No 449
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase. Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system.
Probab=24.73 E-value=1.3e+02 Score=31.89 Aligned_cols=52 Identities=23% Similarity=0.179 Sum_probs=36.6
Q ss_pred CCeeEEEecccCCCC-----Cee----------eCCchhHHHHHHHHHHhCcEEEEcCcccCccCCC
Q 011777 250 GKVAGFIAETIQGVG-----GAV----------ELAPGYLKLVYDIVRKAGGVCIADEVQTGFGRTG 301 (477)
Q Consensus 250 ~~~a~vi~epi~~~~-----G~~----------~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G 301 (477)
=.+.+|.+.|++... |.- .-+++.++++++.|+++|+-+|+|=|+..++..+
T Consensus 123 LGv~~i~L~Pi~~~~~~~~~GY~~~~~~~~~~~~G~~~e~k~lV~~aH~~Gi~VilD~V~NH~~~~~ 189 (542)
T TIGR02402 123 LGITAIELMPVAQFPGTRGWGYDGVLPYAPHNAYGGPDDLKALVDAAHGLGLGVILDVVYNHFGPEG 189 (542)
T ss_pred cCCCEEEeCccccCCCCCCCCCCccCccccccccCCHHHHHHHHHHHHHCCCEEEEEEccCCCCCcc
Confidence 356788888874321 110 0123568999999999999999999988776544
No 450
>COG1453 Predicted oxidoreductases of the aldo/keto reductase family [General function prediction only]
Probab=24.38 E-value=4.2e+02 Score=26.55 Aligned_cols=33 Identities=27% Similarity=0.401 Sum_probs=22.0
Q ss_pred CCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhC
Q 011777 249 SGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAG 285 (477)
Q Consensus 249 ~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~g 285 (477)
+.....||+||.-|-+=...+ | +++.+||++++
T Consensus 194 ~~~~gI~IMeP~~gG~l~~~v-P---~~~~~l~~~~~ 226 (391)
T COG1453 194 SKGLGIFIMEPLDGGGLLYNV-P---EKLEELCRPAS 226 (391)
T ss_pred hCCCcEEEEeeCCCCCcccCC-C---HHHHHHHHhcC
Confidence 467899999998763322212 2 66788888765
No 451
>PRK05720 mtnA methylthioribose-1-phosphate isomerase; Reviewed
Probab=24.34 E-value=6.9e+02 Score=24.83 Aligned_cols=38 Identities=18% Similarity=0.163 Sum_probs=23.5
Q ss_pred CeeEEE--ecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEE
Q 011777 251 KVAGFI--AETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIA 290 (477)
Q Consensus 251 ~~a~vi--~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~ 290 (477)
++-.|+ .+-+..+||++. .-+- -.+.-+|++|++++++
T Consensus 225 ~vd~VivGAd~I~~nG~v~N-kiGT-~~lAl~Ak~~~vPfyV 264 (344)
T PRK05720 225 KIDAVIVGADRIAANGDVAN-KIGT-YQLAIAAKYHGVPFYV 264 (344)
T ss_pred CCCEEEEcccEEecCCCEee-hhhH-HHHHHHHHHhCCCEEE
Confidence 344444 455777777544 3333 3456678999999875
No 452
>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily. This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.
Probab=24.31 E-value=1.4e+02 Score=23.30 Aligned_cols=50 Identities=14% Similarity=0.322 Sum_probs=28.9
Q ss_pred HHHHHHHhhCC-CCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccC
Q 011777 142 DFAEALASKMP-GNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHG 193 (477)
Q Consensus 142 ~l~~~La~~~~-~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG 193 (477)
++.+.+..... .+..-|++|++|..|...+..+... |-+.+..++|++-+
T Consensus 53 ~~~~~~~~~~~~~~~~ivv~c~~g~~s~~~~~~l~~~--G~~~v~~~~Gg~~~ 103 (106)
T cd01519 53 EFEKKYGFPKPSKDKELIFYCKAGVRSKAAAELARSL--GYENVGNYPGSWLD 103 (106)
T ss_pred HHHHHhcccCCCCCCeEEEECCCcHHHHHHHHHHHHc--CCccceecCCcHHH
Confidence 44444443322 2335688888888776666554433 65667666666543
No 453
>cd07571 ALP_N-acyl_transferase Apolipoprotein N-acyl transferase (class 9 nitrilases). ALP N-acyl transferase (Lnt), is an essential membrane-bound enzyme in gram-negative bacteria, which catalyzes the N-acylation of apolipoproteins, the final step in lipoprotein maturation. This is a reverse amidase (i.e. condensation) reaction. This subgroup belongs to a larger nitrilase superfamily comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13), this subgroup corresponds to class 9.
Probab=24.25 E-value=1.9e+02 Score=27.42 Aligned_cols=53 Identities=11% Similarity=0.046 Sum_probs=31.9
Q ss_pred HHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEE
Q 011777 237 AQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIA 290 (477)
Q Consensus 237 ~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~ 290 (477)
++.+.++++....+. +-+++=|-...+|.......+++++.++|+++++.+|+
T Consensus 25 l~~~~~~i~~a~~~g-a~lvvfPE~~l~g~~~~~~~~~~~l~~~ak~~~i~ii~ 77 (270)
T cd07571 25 LDRYLDLTRELADEK-PDLVVWPETALPFDLQRDPDALARLARAARAVGAPLLT 77 (270)
T ss_pred HHHHHHHHhhcccCC-CCEEEecCCcCCcccccCHHHHHHHHHHHHhcCCeEEE
Confidence 344444444322222 33445454444454344567899999999999998874
No 454
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins. SGNH_hydrolase subfamily similar to the Saccharomyces cerevisiae IAH1. IAH1 may be the major esterase that hydrolyses isoamyl acetate in sake mash. The SGNH-family of hydrolases is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases
Probab=24.12 E-value=1.2e+02 Score=26.64 Aligned_cols=56 Identities=13% Similarity=0.124 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHhccCC--CCeeEEEecccC-CCCCe----------eeCC----chhHHHHHHHHHHhCcEEE
Q 011777 234 ARYAQDLQDHIDFGTS--GKVAGFIAETIQ-GVGGA----------VELA----PGYLKLVYDIVRKAGGVCI 289 (477)
Q Consensus 234 ~~~~~~le~~i~~~~~--~~~a~vi~epi~-~~~G~----------~~~~----~~~l~~l~~l~~~~gillI 289 (477)
..+.+.++++++.... ..+..|++.|.. ..... .... ..|-+.+.++|+++++.+|
T Consensus 88 ~~~~~~~~~~i~~~~~~~~~~~ii~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~i 160 (199)
T cd01838 88 DEYKENLRKIVSHLKSLSPKTKVILITPPPVDEEAWEKSLEDGGSQPGRTNELLKQYAEACVEVAEELGVPVI 160 (199)
T ss_pred HHHHHHHHHHHHHHHhhCCCCeEEEeCCCCCCHHHHhhhhccccCCccccHHHHHHHHHHHHHHHHHhCCcEE
Confidence 3445667776664322 456677777643 21110 0001 1444578889999997776
No 455
>cd01422 MGS Methylglyoxal synthase catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The first part of the catalytic mechanism is believed to be similar to TIM (triosephosphate isomerase) in that both enzymes utilize DHAP to form an ene-diolate phosphate intermediate. In MGS, the second catalytic step is characterized by the elimination of phosphate and collapse of the enediolate to form methylglyoxal instead of reprotonation to form the isomer glyceraldehyde 3-phosphate, as in TIM. This is the first reaction in the methylglyoxal bypass of the Embden-Myerhoff glycolytic pathway and is believed to provide physiological benefits under non-ideal growth conditions in bacteria.
Probab=23.75 E-value=2.4e+02 Score=22.91 Aligned_cols=46 Identities=11% Similarity=-0.005 Sum_probs=31.6
Q ss_pred HHHHHHHhccCCCCeeEEEecccC-CCCCeeeCCchhHHHHHHHHHHhCcEEEE
Q 011777 238 QDLQDHIDFGTSGKVAGFIAETIQ-GVGGAVELAPGYLKLVYDIVRKAGGVCIA 290 (477)
Q Consensus 238 ~~le~~i~~~~~~~~a~vi~epi~-~~~G~~~~~~~~l~~l~~l~~~~gillI~ 290 (477)
.++.++|. .+++.+||..|.. +..+ ....-..|++.|-+|+++++.
T Consensus 60 ~~i~~~i~---~g~i~~VInt~~~~~~~~----~~~dg~~iRr~a~~~~Ip~~T 106 (115)
T cd01422 60 QQIGALIA---EGEIDAVIFFRDPLTAQP----HEPDVKALLRLCDVYNIPLAT 106 (115)
T ss_pred hHHHHHHH---cCceeEEEEcCCCCCCCc----ccccHHHHHHHHHHcCCCEEE
Confidence 44666666 4688899888753 3321 122356999999999999874
No 456
>cd01393 recA_like RecA is a bacterial enzyme which has roles in homologous recombination, DNA repair, and the induction of the SOS response. RecA couples ATP hydrolysis to DNA strand exchange. While prokaryotes have a single RecA protein, eukaryotes have multiple RecA homologs such as Rad51, DMC1 and Rad55/57. Archaea have the RecA-like homologs radA and radB.
Probab=23.42 E-value=2.1e+02 Score=25.99 Aligned_cols=42 Identities=12% Similarity=0.150 Sum_probs=27.0
Q ss_pred CCCeeEEEecccCCCCCeeeCC-----------chhHHHHHHHHHHhCcEEEE
Q 011777 249 SGKVAGFIAETIQGVGGAVELA-----------PGYLKLVYDIVRKAGGVCIA 290 (477)
Q Consensus 249 ~~~~a~vi~epi~~~~G~~~~~-----------~~~l~~l~~l~~~~gillI~ 290 (477)
..++..|++|++..--...... ...+..|..+|+++++.+|+
T Consensus 112 ~~~~~lvVIDsis~l~~~~~~~~~~~~~~~~~l~~~~~~L~~~a~~~~~~vi~ 164 (226)
T cd01393 112 SGRVDLVVVDSVAALFRKEFIGRGMLAERARLLSQALRKLLRLADKFNVAVVF 164 (226)
T ss_pred cCCeeEEEEcCcchhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHHhCcEEEE
Confidence 4578899999986521100011 12456688999999988774
No 457
>COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism]
Probab=23.19 E-value=1.8e+02 Score=30.56 Aligned_cols=75 Identities=16% Similarity=0.243 Sum_probs=39.4
Q ss_pred CeeEEEecccCCCCCeeeCCchh-HHHHHHHHHHhCcEEEEcCcccCc-----------cCCCCCCc-cccccCCCcc-e
Q 011777 251 KVAGFIAETIQGVGGAVELAPGY-LKLVYDIVRKAGGVCIADEVQTGF-----------GRTGSHYW-GFETQGVIPD-I 316 (477)
Q Consensus 251 ~~a~vi~epi~~~~G~~~~~~~~-l~~l~~l~~~~gillI~DEv~~gf-----------gr~G~~~~-~~~~~gv~pD-i 316 (477)
.+-+||.+-...-+|++-+...+ -.+-.++|+.++++|++=.=..|| -|.|+++. ++...- .|- .
T Consensus 324 ~pVGiIANqp~~~~G~l~~~sa~KaArFI~~cd~~~iPlv~L~d~pGFm~G~~~E~~giik~Gakl~~A~aeat-VPkit 402 (526)
T COG4799 324 RPVGIIANQPRHLGGVLDIDSADKAARFIRLCDAFNIPLVFLVDTPGFMPGTDQEYGGIIKHGAKLLYAVAEAT-VPKIT 402 (526)
T ss_pred EEEEEEecCccccccccchHHHHHHHHHHHhhhccCCCeEEEeCCCCCCCChhHHhChHHHhhhHHHhhHhhcc-CCeEE
Confidence 44556655433445654432222 234458999999988854334566 12332221 111111 344 4
Q ss_pred eeecccccCc
Q 011777 317 VTMAKGIGNG 326 (477)
Q Consensus 317 vt~sK~lg~G 326 (477)
+++.|++|+|
T Consensus 403 vI~rkayGga 412 (526)
T COG4799 403 VITRKAYGGA 412 (526)
T ss_pred EEecccccce
Confidence 4689999985
No 458
>COG2265 TrmA SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis]
Probab=22.97 E-value=5.9e+02 Score=26.20 Aligned_cols=24 Identities=33% Similarity=0.091 Sum_probs=17.9
Q ss_pred CCEEEEeCChHHHHHHHHHHHHhc
Q 011777 155 LKVVYFVNSGTEANELAMLMARLS 178 (477)
Q Consensus 155 ~~~v~~~~sGseA~~~Al~~ar~~ 178 (477)
..+|+=+-.-.+|++.|-+-|...
T Consensus 315 ~~~V~gvEi~~~aV~~A~~NA~~n 338 (432)
T COG2265 315 VKKVHGVEISPEAVEAAQENAAAN 338 (432)
T ss_pred CCEEEEEecCHHHHHHHHHHHHHc
Confidence 357777777888888888877653
No 459
>PRK10528 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional
Probab=22.81 E-value=91 Score=27.77 Aligned_cols=16 Identities=0% Similarity=-0.076 Sum_probs=12.1
Q ss_pred HHHHHHHHHHhCcEEE
Q 011777 274 LKLVYDIVRKAGGVCI 289 (477)
Q Consensus 274 l~~l~~l~~~~gillI 289 (477)
-+.+.++|+++++.+|
T Consensus 131 ~~~~~~~a~~~~v~~i 146 (191)
T PRK10528 131 SAIYPKLAKEFDIPLL 146 (191)
T ss_pred HHHHHHHHHHhCCCcc
Confidence 3447888999997766
No 460
>PRK05772 translation initiation factor IF-2B subunit alpha; Provisional
Probab=22.62 E-value=5.7e+02 Score=25.63 Aligned_cols=38 Identities=18% Similarity=0.066 Sum_probs=23.6
Q ss_pred CeeEEEe--cccCCCCCeeeCCchhHHHHHHHHHHhCcEEEE
Q 011777 251 KVAGFIA--ETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIA 290 (477)
Q Consensus 251 ~~a~vi~--epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~ 290 (477)
++-.||+ +-+..+||+.. .-+- -.|.-+|++||+++++
T Consensus 246 ~Vd~VivGAD~I~~NG~v~N-KiGT-y~lA~~Ak~~~vPfyV 285 (363)
T PRK05772 246 MVNNVMVGADRILRDGHVFN-KIGT-FKEAVIAHELGIPFYA 285 (363)
T ss_pred CCCEEEECccEEecCCCEee-hhhh-HHHHHHHHHhCCCEEE
Confidence 3444444 55777776443 3332 3456678999999885
No 461
>COG0821 gcpE 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase [Lipid metabolism]
Probab=22.45 E-value=7.6e+02 Score=24.41 Aligned_cols=26 Identities=12% Similarity=-0.024 Sum_probs=21.9
Q ss_pred eeCCchhHHHHHHHHHHhCcEEEEcC
Q 011777 267 VELAPGYLKLVYDIVRKAGGVCIADE 292 (477)
Q Consensus 267 ~~~~~~~l~~l~~l~~~~gillI~DE 292 (477)
.+|+.+--+.+.+|+++-+++||.|=
T Consensus 56 tv~~~e~A~A~~~Ik~~~~vPLVaDi 81 (361)
T COG0821 56 TVPDMEAAEALKEIKQRLNVPLVADI 81 (361)
T ss_pred ecCCHHHHHHHHHHHHhCCCCEEEEe
Confidence 34667778899999999999999994
No 462
>smart00545 JmjN Small domain found in the jumonji family of transcription factors. To date, this domain always co-occurs with the JmjC domain (although the reverse is not true).
Probab=22.40 E-value=1e+02 Score=20.21 Aligned_cols=21 Identities=14% Similarity=0.158 Sum_probs=16.6
Q ss_pred CchhHHHHHHHHHHhCcEEEE
Q 011777 270 APGYLKLVYDIVRKAGGVCIA 290 (477)
Q Consensus 270 ~~~~l~~l~~l~~~~gillI~ 290 (477)
+-.|++.|.++++++|+.=|+
T Consensus 15 p~~yi~~i~~~~~~yGi~KIv 35 (42)
T smart00545 15 PLAYISKIRPQAEKYGICKVV 35 (42)
T ss_pred HHHHHHHHHHHHhhCCEEEEE
Confidence 457788888889999987664
No 463
>TIGR03865 PQQ_CXXCW PQQ-dependent catabolism-associated CXXCW motif protein. Members of this protein family have a CXXXCW motif, consistent with a possible role in redox cofactor binding. This protein family shows strong relationships by phylogenetic profiling and conserved gene neighborhoods with a transport system for alcohols metabolized by PQQ-dependent enzymes.
Probab=22.38 E-value=2e+02 Score=25.03 Aligned_cols=52 Identities=12% Similarity=0.095 Sum_probs=31.0
Q ss_pred HHHHHHhhCC--CCCCEEEEeCChH-HHHHHHHHHHHhccCCceEEEEccCccCCcc
Q 011777 143 FAEALASKMP--GNLKVVYFVNSGT-EANELAMLMARLSTGNLGMIALRNAYHGGSS 196 (477)
Q Consensus 143 l~~~La~~~~--~~~~~v~~~~sGs-eA~~~Al~~ar~~~~~~~ii~~~~~yhG~~~ 196 (477)
+.+.+.+..+ .+..-|++|.+|. -+..++-.+.. -|-.+|..++|++.+|..
T Consensus 103 ~~~~l~~~~~~~~d~~IVvYC~~G~~~S~~aa~~L~~--~G~~~V~~l~GG~~aW~~ 157 (162)
T TIGR03865 103 FRRGLERATGGDKDRPLVFYCLADCWMSWNAAKRALA--YGYSNVYWYPDGTDGWQA 157 (162)
T ss_pred HHHHHHHhcCCCCCCEEEEEECCCCHHHHHHHHHHHh--cCCcceEEecCCHHHHHH
Confidence 4455544332 2334678888875 44444333332 377788889999987743
No 464
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=22.28 E-value=1.4e+02 Score=26.00 Aligned_cols=53 Identities=19% Similarity=0.097 Sum_probs=28.6
Q ss_pred HHHHHHHHhcc--CCCCeeEEEecccCCCCC--eeeC----CchhHHHHHHHHHHhCcEEE
Q 011777 237 AQDLQDHIDFG--TSGKVAGFIAETIQGVGG--AVEL----APGYLKLVYDIVRKAGGVCI 289 (477)
Q Consensus 237 ~~~le~~i~~~--~~~~~a~vi~epi~~~~G--~~~~----~~~~l~~l~~l~~~~gillI 289 (477)
.+.++++++.. ...+...+++.|..-... .... ...+-+.+.++|+++|+.+|
T Consensus 92 ~~~l~~li~~i~~~~~~~~iil~t~~p~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v 152 (188)
T cd01827 92 KKDYETMIDSFQALPSKPKIYICYPIPAYYGDGGFINDNIIKKEIQPMIDKIAKKLNLKLI 152 (188)
T ss_pred HHHHHHHHHHHHHHCCCCeEEEEeCCcccccCCCccchHHHHHHHHHHHHHHHHHcCCcEE
Confidence 35566666532 123455666666421111 0011 12456678899999998876
No 465
>PRK13602 putative ribosomal protein L7Ae-like; Provisional
Probab=22.18 E-value=3.1e+02 Score=20.78 Aligned_cols=45 Identities=11% Similarity=0.129 Sum_probs=30.6
Q ss_pred HHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCc
Q 011777 238 QDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEV 293 (477)
Q Consensus 238 ~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv 293 (477)
+...+.|+ .++...|++-..- ++...+.+..+|+++++.++.-+.
T Consensus 17 ~~v~kai~---~gkaklViiA~D~--------~~~~~~~i~~~c~~~~Vp~~~~~s 61 (82)
T PRK13602 17 KQTVKALK---RGSVKEVVVAEDA--------DPRLTEKVEALANEKGVPVSKVDS 61 (82)
T ss_pred HHHHHHHH---cCCeeEEEEECCC--------CHHHHHHHHHHHHHcCCCEEEECC
Confidence 55666665 3566666664321 335689999999999999975543
No 466
>cd01527 RHOD_YgaP Member of the Rhodanese Homology Domain superfamily. This CD includes Escherichia coli YgaP, and similar uncharacterized putative rhodanese-related sulfurtransferases.
Probab=21.84 E-value=1.3e+02 Score=23.09 Aligned_cols=41 Identities=15% Similarity=0.186 Sum_probs=27.8
Q ss_pred CCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCC
Q 011777 152 PGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGG 194 (477)
Q Consensus 152 ~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~ 194 (477)
+.+..-|++|++|..+-.++.++.+. |...+..+++++-++
T Consensus 52 ~~~~~iv~~c~~g~~s~~~~~~L~~~--g~~~v~~l~gG~~~W 92 (99)
T cd01527 52 VGANAIIFHCRSGMRTQQNAERLAAI--SAGEAYVLEGGLDAW 92 (99)
T ss_pred CCCCcEEEEeCCCchHHHHHHHHHHc--CCccEEEeeCCHHHH
Confidence 44445788899998877777776654 444677777776544
No 467
>COG3155 ElbB Uncharacterized protein involved in an early stage of isoprenoid biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=21.56 E-value=39 Score=29.23 Aligned_cols=42 Identities=26% Similarity=0.366 Sum_probs=31.7
Q ss_pred CCCcceeeeccccc-CccceEEEEeCHHHHHhhcccccccCCC
Q 011777 311 GVIPDIVTMAKGIG-NGLPLGAVVTTPEIANVMAQKIQFNTFG 352 (477)
Q Consensus 311 gv~pDivt~sK~lg-~G~pig~v~~~~~~~~~~~~~~~~~t~~ 352 (477)
.+.||+..+.|+|. .|-|+|++...+.+...+.......|.+
T Consensus 112 ~v~pDv~al~~a~~~agKP~G~iCIaP~m~pki~g~~~~~TIG 154 (217)
T COG3155 112 SVDPDLKALAQAMHQAGKPLGFMCIAPAMLPKIFGFPLRLTIG 154 (217)
T ss_pred eeCHHHHHHHHHHHHhCCCceEEEecHHHHHHHcCCceeEEec
Confidence 57899999999999 6999999999988776654433333443
No 468
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=21.50 E-value=88 Score=26.01 Aligned_cols=38 Identities=11% Similarity=-0.032 Sum_probs=20.2
Q ss_pred HHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEE
Q 011777 239 DLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIA 290 (477)
Q Consensus 239 ~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~ 290 (477)
.++++++ .++.++|+.-.+ .+ -+.+.++|+++++.|+.
T Consensus 73 ~l~~l~~----~~~P~iIvt~~~------~~----p~~l~e~a~~~~ipll~ 110 (127)
T PF02603_consen 73 RLEKLFS----YNPPCIIVTRGL------EP----PPELIELAEKYNIPLLR 110 (127)
T ss_dssp HHHHHCT----TT-S-EEEETTT-------------HHHHHHHHHCT--EEE
T ss_pred HHHHHhC----CCCCEEEEECcC------CC----CHHHHHHHHHhCCcEEE
Confidence 4555554 456666664422 23 36778999999998874
No 469
>PF03602 Cons_hypoth95: Conserved hypothetical protein 95; InterPro: IPR004398 This entry contains Ribosomal RNA small subunit methyltransferase D as well as the putative rRNA methyltransferase YlbH. They methylate the guanosine in position 966 of 16S rRNA in the assembled 30S particle [].; GO: 0008168 methyltransferase activity, 0031167 rRNA methylation; PDB: 3P9N_A 2ESR_B 2IFT_A 1WS6_A 2FPO_B 2FHP_A.
Probab=21.42 E-value=2.9e+02 Score=24.57 Aligned_cols=84 Identities=23% Similarity=0.199 Sum_probs=37.2
Q ss_pred CCCCEEEeecCCcccccCCCCCHHHHHHHHHHHhhccccccccCC-hHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHH
Q 011777 93 ENGRRYLDAFAGIVTVSCGHCHPDVLNAIFEQSKLLQHATTIYLH-HAIADFAEALASKMPGNLKVVYFVNSGTEANELA 171 (477)
Q Consensus 93 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~~l~~~~~~~~~~~~-~~~~~l~~~La~~~~~~~~~v~~~~sGseA~~~A 171 (477)
.+|..+||+++|.|+. | .||+.+-+.. ....-.+ ....-+.+.+... +...+..++......+..
T Consensus 41 ~~g~~vLDLFaGSGal--G------lEALSRGA~~---v~fVE~~~~a~~~i~~N~~~l-~~~~~~~v~~~d~~~~l~-- 106 (183)
T PF03602_consen 41 LEGARVLDLFAGSGAL--G------LEALSRGAKS---VVFVEKNRKAIKIIKKNLEKL-GLEDKIRVIKGDAFKFLL-- 106 (183)
T ss_dssp HTT-EEEETT-TTSHH--H------HHHHHTT-SE---EEEEES-HHHHHHHHHHHHHH-T-GGGEEEEESSHHHHHH--
T ss_pred cCCCeEEEcCCccCcc--H------HHHHhcCCCe---EEEEECCHHHHHHHHHHHHHh-CCCcceeeeccCHHHHHH--
Confidence 7899999999999853 3 3444433222 1111122 2334444444443 322223334444333332
Q ss_pred HHHHHhccCCceEEEEccCcc
Q 011777 172 MLMARLSTGNLGMIALRNAYH 192 (477)
Q Consensus 172 l~~ar~~~~~~~ii~~~~~yh 192 (477)
+.. ....+-++|.++|-|.
T Consensus 107 -~~~-~~~~~fDiIflDPPY~ 125 (183)
T PF03602_consen 107 -KLA-KKGEKFDIIFLDPPYA 125 (183)
T ss_dssp -HHH-HCTS-EEEEEE--STT
T ss_pred -hhc-ccCCCceEEEECCCcc
Confidence 222 1235567888887775
No 470
>PF00926 DHBP_synthase: 3,4-dihydroxy-2-butanone 4-phosphate synthase; InterPro: IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase (4.1.99.12 from EC) (DHBP synthase) (RibB) catalyses the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate, the latter serving as the biosynthetic precursor for the xylene ring of riboflavin []. In Photobacterium leiognathi, the riboflavin synthesis genes ribB (DHBP synthase), ribE (riboflavin synthase), ribH (lumazone synthase) and ribA (GTP cyclohydrolase II) all reside in the lux operon []. RibB is sometimes found as a bifunctional enzyme with GTP cyclohydrolase II that catalyses the first committed step in the biosynthesis of riboflavin (IPR000926 from INTERPRO). No sequences with significant homology to DHBP synthase are found in the metazoa.; GO: 0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity, 0009231 riboflavin biosynthetic process; PDB: 1K4O_A 1K4L_A 1K4P_A 1K49_A 1K4I_A 1TKU_A 1TKS_B 2RIS_A 2RIU_A 3MIO_A ....
Probab=21.05 E-value=1.3e+02 Score=27.24 Aligned_cols=36 Identities=14% Similarity=0.175 Sum_probs=26.3
Q ss_pred CCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEE
Q 011777 250 GKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIA 290 (477)
Q Consensus 250 ~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~ 290 (477)
-..+++|+|=++- .|.... ++++.+++++||+.+|.
T Consensus 151 l~p~avi~eil~~-dG~~~~----~~~~~~fA~~~~l~~vs 186 (194)
T PF00926_consen 151 LSPVAVICEILDD-DGDMAR----RDELEEFAKKHGLPIVS 186 (194)
T ss_dssp S-SBEEEEEBBET-TSSBHC----HHHHHHHHHHTT-EEEE
T ss_pred CCCcEEEEEEeCC-CCCcCC----HHHHHHHHHHcCCcEEE
Confidence 3568999997755 454444 78889999999999984
No 471
>TIGR00506 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase. Several members of the family are bifunctional, involving both ribA and ribB function. In these cases, ribA tends to be on the C-terminal end of the protein and ribB tends to be on the N-terminal.
Probab=20.96 E-value=1.3e+02 Score=27.24 Aligned_cols=35 Identities=23% Similarity=0.280 Sum_probs=26.7
Q ss_pred CeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEE
Q 011777 251 KVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIA 290 (477)
Q Consensus 251 ~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~ 290 (477)
..+++|||=++- .|.... ++++.+++++||+.+|.
T Consensus 157 ~p~~vicEil~~-dG~m~~----~~~~~~fA~~~~l~~is 191 (199)
T TIGR00506 157 KPAGVICEMMND-DGTMAR----KPELMEYAKKHNLKLIS 191 (199)
T ss_pred CceEEEEEEeCC-CCCccC----HHHHHHHHHHcCCcEEE
Confidence 358899998654 454444 78889999999999973
No 472
>PRK14057 epimerase; Provisional
Probab=20.95 E-value=7.2e+02 Score=23.53 Aligned_cols=50 Identities=8% Similarity=0.019 Sum_probs=26.1
Q ss_pred HHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHH---HHHHHhC--cEEEEc
Q 011777 237 AQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVY---DIVRKAG--GVCIAD 291 (477)
Q Consensus 237 ~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~---~l~~~~g--illI~D 291 (477)
++.++..+... +.+-.+.+|| |-+| ...-++-+++|+ ++.+++| +.+-+|
T Consensus 145 ~e~i~~~l~~v--D~VLvMtV~P--GfgG-Q~Fi~~~l~KI~~lr~~~~~~~~~~~IeVD 199 (254)
T PRK14057 145 LDVIIPILSDV--EVIQLLAVNP--GYGS-KMRSSDLHERVAQLLCLLGDKREGKIIVID 199 (254)
T ss_pred HHHHHHHHHhC--CEEEEEEECC--CCCc-hhccHHHHHHHHHHHHHHHhcCCCceEEEE
Confidence 47777777622 3444555555 3334 334444455555 4445554 556666
No 473
>PF11422 IBP39: Initiator binding protein 39 kDa; InterPro: IPR024238 Initiator binding protein 39kDa (IBP39) recognises the initiator (Inr), which in Trichomonas vaginalis is solely responsible for transcription start site selection. IBP39 consists of an N-terminal Inr binding domain, a flexible linker, and a C-terminal domain. The C-terminal domain interacts with the RNAP II large subunit C-terminal domain. Binding of IBP39 to Inr recruits RNAP II and initiates transcription []. This entry represents the C-terminal domain.; PDB: 1Q88_A 1Q87_B 1Q89_A.
Probab=20.84 E-value=37 Score=29.79 Aligned_cols=22 Identities=45% Similarity=0.770 Sum_probs=12.3
Q ss_pred cccCceeEEeeeccEEEeCCCCEE
Q 011777 75 YYQKPLNIVEGKMQYLFDENGRRY 98 (477)
Q Consensus 75 ~~~~p~~~~~g~G~~~~d~dG~~y 98 (477)
.|..|.+ ++.|.||.|++|++|
T Consensus 150 vyN~P~i--~s~~~YlvdE~g~~f 171 (181)
T PF11422_consen 150 VYNLPLI--SSDGQYLVDENGENF 171 (181)
T ss_dssp EEE-TTS---TTS--EEETT--EE
T ss_pred Eeccccc--CCCcceeEcCCCcch
Confidence 3445655 788999999999987
No 474
>PF06153 DUF970: Protein of unknown function (DUF970); InterPro: IPR010375 This is a family of uncharacterised bacterial proteins.; PDB: 3M05_A.
Probab=20.79 E-value=33 Score=27.73 Aligned_cols=49 Identities=22% Similarity=0.370 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHcCceeec----cCC--CCCEEEEeCCCCCcHHHHHHHHHHHHHHHh
Q 011777 424 AETAVLFEKLRELGVLVGK----GGL--HGNVFRIKPPMCFTKDDADFLVDALDYSMS 475 (477)
Q Consensus 424 ~~~~~~~~~l~~~Gv~v~~----~~~--~~~~iRi~p~~~~t~e~i~~~l~~l~~~l~ 475 (477)
..+..+.+.|.++|+.+.. ||. .+|.--+ ....++++|+.++.+++..+
T Consensus 11 ~Da~~l~~~L~~~g~~~TkLsstGGFLr~GNtTll---iGvede~v~~vl~iIk~~c~ 65 (109)
T PF06153_consen 11 EDADDLSDALNENGFRVTKLSSTGGFLREGNTTLL---IGVEDEKVDEVLEIIKENCK 65 (109)
T ss_dssp HHHHHHHHHHHHTT--EEEEEEEETTTTEEEEEEE---EEEEGGGHHHHHHHHHHHH-
T ss_pred hhHHHHHHHHHHCCceEEEEecccceeccCCEEEE---EEecHHHHHHHHHHHHHhhc
Confidence 3577899999999997743 322 1333222 55688999999999998764
No 475
>PF02082 Rrf2: Transcriptional regulator; InterPro: IPR000944 The following uncharacterised bacterial proteins have been shown to be evolutionary related, Desulfovibrio vulgaris protein Rrf2; Escherichia coli hypothetical proteins yfhP and yjeB; Bacillus subtilis hypothetical proteins yhdE, yrzC and ywgB; Mycobacterium tuberculosis hypothetical protein Rv1287; and Synechocystis sp. (strain PCC 6803) hypothetical protein slr0846. These are small proteins of 12 to 18kDa which seem to contain a signal sequence, and may represent a family of probable transcriptional regulators.; PDB: 3T8T_A 3T8R_A 3K69_A 3LWF_C 1XD7_A 2Y75_E 1YLF_C.
Probab=20.76 E-value=2.6e+02 Score=20.95 Aligned_cols=41 Identities=22% Similarity=0.243 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHH
Q 011777 425 ETAVLFEKLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADF 465 (477)
Q Consensus 425 ~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~ 465 (477)
....+.+.|.+.|++....|..|++.--.+|-.+|--||=+
T Consensus 41 ~l~kil~~L~~~Gli~s~~G~~GGy~L~~~~~~Itl~dI~~ 81 (83)
T PF02082_consen 41 YLRKILQKLKKAGLIESSRGRGGGYRLARPPEEITLLDIVR 81 (83)
T ss_dssp HHHHHHHHHHHTTSEEEETSTTSEEEESS-CCGSBHHHHHH
T ss_pred HHHHHHHHHhhCCeeEecCCCCCceeecCCHHHCCHHHHHH
Confidence 45688899999999877666556654445666666666544
No 476
>cd01529 4RHOD_Repeats Member of the Rhodanese Homology Domain superfamily. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. Only the second and most of the fourth repeats contain the putative catalytic Cys residue. This CD aligns the 1st , 2nd, 3rd, and 4th repeats.
Probab=20.74 E-value=2e+02 Score=22.04 Aligned_cols=41 Identities=12% Similarity=-0.036 Sum_probs=27.6
Q ss_pred CCCCCEEEEeCChHHHHHHHHHHHHhccCCceEEEEccCccCC
Q 011777 152 PGNLKVVYFVNSGTEANELAMLMARLSTGNLGMIALRNAYHGG 194 (477)
Q Consensus 152 ~~~~~~v~~~~sGseA~~~Al~~ar~~~~~~~ii~~~~~yhG~ 194 (477)
+.+..-|++|++|..+-..+..+.+ .|-+.|..+++++-++
T Consensus 54 ~~~~~ivv~c~~g~~s~~~~~~l~~--~G~~~v~~l~GG~~~W 94 (96)
T cd01529 54 GRATRYVLTCDGSLLARFAAQELLA--LGGKPVALLDGGTSAW 94 (96)
T ss_pred CCCCCEEEEeCChHHHHHHHHHHHH--cCCCCEEEeCCCHHHh
Confidence 3344568888888888776665533 3656777788887654
No 477
>COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
Probab=20.73 E-value=3.1e+02 Score=26.55 Aligned_cols=53 Identities=17% Similarity=0.222 Sum_probs=37.9
Q ss_pred HHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEcCcccCcc
Q 011777 237 AQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIADEVQTGFG 298 (477)
Q Consensus 237 ~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfg 298 (477)
.+++++.+. ......+-+.|.... ..+.+..+..+.+.|.++|+++++ ++|.+
T Consensus 115 ~~E~er~v~---~~gf~g~~l~p~~~~---~~~~~~~~~pi~~~a~~~gvpv~i---htG~~ 167 (293)
T COG2159 115 AEELERRVR---ELGFVGVKLHPVAQG---FYPDDPRLYPIYEAAEELGVPVVI---HTGAG 167 (293)
T ss_pred HHHHHHHHH---hcCceEEEecccccC---CCCCChHHHHHHHHHHHcCCCEEE---EeCCC
Confidence 466777766 346788888884432 234555589999999999999999 56553
No 478
>TIGR00512 salvage_mtnA S-methyl-5-thioribose-1-phosphate isomerase. The delineation of this family was based in part on a discussion and neighbor-joining phylogenetic study, by Kyrpides and Woese, of archaeal and other proteins homologous to the alpha, beta, and delta subunits of eukaryotic initiation factor 2B (eIF-2B), a five-subunit molecule that catalyzes GTP recycling for eIF-2. This clade is now recognized to include the methionine salvage pathway enzyme MtnA.
Probab=20.44 E-value=8.2e+02 Score=24.17 Aligned_cols=38 Identities=18% Similarity=0.216 Sum_probs=23.6
Q ss_pred CeeEEE--ecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEE
Q 011777 251 KVAGFI--AETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIA 290 (477)
Q Consensus 251 ~~a~vi--~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~ 290 (477)
++-.|+ .+-+..+||++. .-+- -.+.-+|++|++++++
T Consensus 225 ~vd~VivGAd~v~~nG~v~n-kiGT-~~lA~~Ak~~~vPfyV 264 (331)
T TIGR00512 225 EVDAVIVGADRIAANGDTAN-KIGT-YQLAVLAKHHGVPFYV 264 (331)
T ss_pred CCCEEEEcccEEecCCCEee-hhhH-HHHHHHHHHhCCCEEE
Confidence 344444 455777777543 3333 3456678999999875
No 479
>cd04918 ACT_AK1-AT_2 ACT domains located C-terminal to the catalytic domain of a monofunctional, lysine-sensitive, plant aspartate kinase 1 (AK1). This CD includes the second of two ACT domains located C-terminal to the catalytic domain of a monofunctional, lysine-sensitive, plant aspartate kinase 1 (AK1), which can be synergistically inhibited by S-adenosylmethionine (SAM). This isoenzyme is found in higher plants, Arabidopsis thaliana (AT) and Zea mays, and also in Chlorophyta. In its inactive state, Arabidopsis AK1 binds the effectors lysine and SAM (two molecules each) at the interface of two ACT1 domain subunits. The second ACT domain (ACT2), this CD, does not interact with an effector. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=20.42 E-value=1.8e+02 Score=20.58 Aligned_cols=48 Identities=23% Similarity=0.149 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHHH
Q 011777 425 ETAVLFEKLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADFLVDALDYSM 474 (477)
Q Consensus 425 ~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l 474 (477)
...++.+.|.+.|+-+..-.....-..+ ++.+.+++.+.+++.|.+.+
T Consensus 16 ~~~~i~~aL~~~~I~v~~i~~g~s~~si--s~~v~~~~~~~av~~Lh~~f 63 (65)
T cd04918 16 ILERAFHVLYTKGVNVQMISQGASKVNI--SLIVNDSEAEGCVQALHKSF 63 (65)
T ss_pred HHHHHHHHHHHCCCCEEEEEecCccceE--EEEEeHHHHHHHHHHHHHHH
Confidence 3567888898999866321111122334 46678899999999998765
No 480
>cd04920 ACT_AKiii-DAPDC_2 ACT domains of a bifunctional AKIII (LysC)-like aspartokinase/meso-diaminopimelate decarboxylase (DAPDC). This CD includes the second of two ACT domains of a bifunctional AKIII (LysC)-like aspartokinase/meso-diaminopimelate decarboxylase (DAPDC) bacterial protein. Aspartokinase (AK) is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. The lysA gene encodes the enzyme DAPDC, a pyridoxal-5'-phosphate (PLP)-dependent enzyme which catalyzes the final step in the lysine biosynthetic pathway converting meso-diaminopimelic acid (DAP) to l-lysine. Tandem ACT domains are positioned centrally with the AK catalytic domain N-terminal and the DAPDC domains C-terminal. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=20.35 E-value=1.8e+02 Score=20.54 Aligned_cols=45 Identities=16% Similarity=0.220 Sum_probs=32.1
Q ss_pred HHHHHHHHHHcCceeeccCCCCCEEEEeCCCCCcHHHHHHHHHHHHHHH
Q 011777 426 TAVLFEKLRELGVLVGKGGLHGNVFRIKPPMCFTKDDADFLVDALDYSM 474 (477)
Q Consensus 426 ~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~e~i~~~l~~l~~~l 474 (477)
..++.+.|.+.|+.+...+..+ +++ ++.+.++|.++++.+|.+.+
T Consensus 17 ~~~~~~~L~~~~i~~i~~~~s~--~~i--s~vv~~~d~~~av~~LH~~f 61 (63)
T cd04920 17 LGPALEVFGKKPVHLVSQAAND--LNL--TFVVDEDQADGLCARLHFQL 61 (63)
T ss_pred HHHHHHHHhcCCceEEEEeCCC--CeE--EEEEeHHHHHHHHHHHHHHH
Confidence 4567777877888775544333 345 46678999999999998765
No 481
>PF04909 Amidohydro_2: Amidohydrolase; InterPro: IPR006992 These proteins are related to the metal-dependent hydrolase superfamily []. The family includes 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase which converts alpha-amino-beta-carboxymuconate-epsilon- semialdehyde (ACMS) to alpha-aminomuconate semialdehyde (AMS). ACMS can be converted non-enzymatically to quinolate, a potent endogenous excitoxin of neuronal cells which is implicated in the pathogenesis of various neurodegenerative disorders. In the presence of AMCSD, ACMS is converted to AMS, a benign catabolite. 2-amino-3-(3-oxoprop-2-enyl)-but-2-enedioate = 2-aminomuconate semialdehyde + CO2. ; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2QPX_A 4D8L_A 3K4W_I 3IRS_B 4DZI_B 3S4T_G 2GWG_B 3IJ6_A 2DVX_C 2DVT_C ....
Probab=20.32 E-value=2.6e+02 Score=25.86 Aligned_cols=51 Identities=12% Similarity=0.137 Sum_probs=33.5
Q ss_pred HHHHHHHHHhccCCCCeeEEEecccCCCCCeeeCCchhHHHHHHHHHHhCcEEEEc
Q 011777 236 YAQDLQDHIDFGTSGKVAGFIAETIQGVGGAVELAPGYLKLVYDIVRKAGGVCIAD 291 (477)
Q Consensus 236 ~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~D 291 (477)
..+++++.+. ...+.+|-+.|..+ +....++.+...+.++|.++|+.+++-
T Consensus 86 ~~~~l~~~~~---~~g~~Gv~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~pv~~H 136 (273)
T PF04909_consen 86 AVEELERALQ---ELGFRGVKLHPDLG--GFDPDDPRLDDPIFEAAEELGLPVLIH 136 (273)
T ss_dssp HHHHHHHHHH---TTTESEEEEESSET--TCCTTSGHCHHHHHHHHHHHT-EEEEE
T ss_pred HHHHHHHhcc---ccceeeeEecCCCC--ccccccHHHHHHHHHHHHhhccceeee
Confidence 3567777774 35677888877433 223344444459999999999998855
Done!