Your job contains 1 sequence.
>011779
MGKHSATGWWVPLTKRWILALLIMLSISTAIAFFIRAALDPCDRHLEVSDKKRVQSQSVP
RIATKSSPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDE
VIYSLEHKMWDRGVQVISAKGQETINTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNV
LWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNS
KELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIK
EKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVL
VQNSQAWGECFGRITIEAMAFQLPVLLQKCLYQGTAAGGTTEIVVNGTTGLLHPVGKEGI
TPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLKKSKSHLY
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 011779
(477 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2018392 - symbol:AT1G75420 species:3702 "Arabi... 1572 1.9e-161 1
TAIR|locus:2013089 - symbol:AT1G19710 species:3702 "Arabi... 1527 1.1e-156 1
TAIR|locus:2093925 - symbol:AT3G15940 species:3702 "Arabi... 254 6.5e-34 2
TAIR|locus:2018144 - symbol:AT1G52420 species:3702 "Arabi... 227 8.0e-32 2
TIGR_CMR|BA_1558 - symbol:BA_1558 "glycosyl transferase, ... 141 1.2e-06 1
TIGR_CMR|CHY_1134 - symbol:CHY_1134 "glycosyl transferase... 136 4.2e-06 1
TIGR_CMR|CPS_4999 - symbol:CPS_4999 "glycosyl transferase... 125 6.7e-05 1
UNIPROTKB|Q47WI9 - symbol:CPS_4182 "Putative lipopolysacc... 123 0.00011 1
TIGR_CMR|CPS_4182 - symbol:CPS_4182 "putative lipopolysac... 123 0.00011 1
TIGR_CMR|CHY_1814 - symbol:CHY_1814 "glycosyltransferase,... 118 0.00041 1
>TAIR|locus:2018392 [details] [associations]
symbol:AT1G75420 species:3702 "Arabidopsis thaliana"
[GO:0009058 "biosynthetic process" evidence=IEA] [GO:0016757
"transferase activity, transferring glycosyl groups" evidence=ISS]
[GO:0001666 "response to hypoxia" evidence=RCA] [GO:0019375
"galactolipid biosynthetic process" evidence=RCA] [GO:0005768
"endosome" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005802 "trans-Golgi network" evidence=IDA]
InterPro:IPR001296 Pfam:PF00534 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005794 GO:GO:0009058 GO:GO:0005768
GO:GO:0016740 GO:GO:0005802 eggNOG:COG0438 CAZy:GT4
HOGENOM:HOG000237742 ProtClustDB:CLSN2682518 EMBL:BT008621
EMBL:AK229704 IPI:IPI00547866 RefSeq:NP_177675.1 UniGene:At.34777
ProteinModelPortal:Q7Y217 PRIDE:Q7Y217 EnsemblPlants:AT1G75420.1
GeneID:843878 KEGG:ath:AT1G75420 TAIR:At1g75420 InParanoid:Q7Y217
OMA:AFHESLE PhylomeDB:Q7Y217 ArrayExpress:Q7Y217
Genevestigator:Q7Y217 Uniprot:Q7Y217
Length = 463
Score = 1572 (558.4 bits), Expect = 1.9e-161, P = 1.9e-161
Identities = 313/448 (69%), Positives = 356/448 (79%)
Query: 15 KRWILALLIMLSISTAIAFFIRAALDPCDRHLEVSDKKRVQSQSVPRIATKSSPLSFMXX 74
KRW L +L+ LS+ST +R++ + C + ++K +S + +S+PL FM
Sbjct: 10 KRWALMVLLFLSVSTVCMILVRSSFETCSISSQFVEEKNGESSAAK---FQSNPLDFMKS 66
Query: 75 XXXXXXXXXXXXXGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGV 134
GGPLLLMELAFLLRGVG V WIT QKP E+DEV+YSLEHKM DRGV
Sbjct: 67 KLVLLVSHELSLSGGPLLLMELAFLLRGVGADVVWITNQKPLEDDEVVYSLEHKMLDRGV 126
Query: 135 QVISAKGQETINTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKL 194
QVISAKGQ+ ++T+LKADLIVLNTAVAGKWLDAVLKE+V +VLP +LWWIHEMRGHYF
Sbjct: 127 QVISAKGQKAVDTSLKADLIVLNTAVAGKWLDAVLKENVVKVLPKILWWIHEMRGHYFNA 186
Query: 195 DYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKR 254
D VKHLP VAGAMIDSH TA YWKNRT+ RL IKMP TYVVHLGNSKELMEVAED+VAKR
Sbjct: 187 DLVKHLPFVAGAMIDSHATAGYWKNRTQARLGIKMPKTYVVHLGNSKELMEVAEDSVAKR 246
Query: 255 VLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESXXXXXXXXXXVPSVHAVII 314
VLREHVRESLGVRNEDLLF IINSVSRGKGQDLFL +F+ES VP++HAV++
Sbjct: 247 VLREHVRESLGVRNEDLLFGIINSVSRGKGQDLFLRAFHESLERIKEKKLQVPTMHAVVV 306
Query: 315 GSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRI 374
GSDM+ QTKFE+ELRN+V +KK+++ VHFVNKTLTVAPY+AAIDVLVQNSQA GECFGRI
Sbjct: 307 GSDMSKQTKFETELRNFVREKKLENFVHFVNKTLTVAPYIAAIDVLVQNSQARGECFGRI 366
Query: 375 TIEAMAFQLPVLLQKCLYQGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHV 434
TIEAMAF+LPVL GTAAGGT EIVVNGTTGLLH GKEG+ PLAKNIVKLAT V
Sbjct: 367 TIEAMAFKLPVL-------GTAAGGTMEIVVNGTTGLLHSAGKEGVIPLAKNIVKLATQV 419
Query: 435 ERRLTMGKRGYERVKEIFQEHHMAERIA 462
E RL MGK GYERVKE+F EHHM+ RIA
Sbjct: 420 ELRLRMGKNGYERVKEMFLEHHMSHRIA 447
>TAIR|locus:2013089 [details] [associations]
symbol:AT1G19710 species:3702 "Arabidopsis thaliana"
[GO:0009058 "biosynthetic process" evidence=IEA] [GO:0016757
"transferase activity, transferring glycosyl groups" evidence=ISS]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0001666 "response
to hypoxia" evidence=RCA] [GO:0019375 "galactolipid biosynthetic
process" evidence=RCA] [GO:0005768 "endosome" evidence=IDA]
[GO:0005802 "trans-Golgi network" evidence=IDA] InterPro:IPR001296
Pfam:PF00534 EMBL:CP002684 GO:GO:0005794 GO:GO:0009058
GO:GO:0005768 GO:GO:0016740 GO:GO:0005802 EMBL:BT029163
EMBL:AK176210 EMBL:AK176263 IPI:IPI00537818 RefSeq:NP_173401.1
UniGene:At.41737 UniGene:At.47209 ProteinModelPortal:Q67Z55
PRIDE:Q67Z55 EnsemblPlants:AT1G19710.1 GeneID:838559
KEGG:ath:AT1G19710 TAIR:At1g19710 HOGENOM:HOG000237742
InParanoid:Q67Z55 OMA:SEVVWIT PhylomeDB:Q67Z55
ProtClustDB:CLSN2682518 ArrayExpress:Q67Z55 Genevestigator:Q67Z55
Uniprot:Q67Z55
Length = 479
Score = 1527 (542.6 bits), Expect = 1.1e-156, P = 1.1e-156
Identities = 312/465 (67%), Positives = 356/465 (76%)
Query: 1 MGKHSATGWWVPLTKRWILALLIMLSISTAIAFFIRAALDPCD-RHLEVSDKKRVQSQ-S 58
M K S + W KRW L +L++LS+ST +R+ D C S +K S
Sbjct: 1 MAKPSTSMWATLQKKRWPLMILLVLSVSTVGMILVRSTFDSCSVSGKRCSREKEDNSDIK 60
Query: 59 VPRIATKSSPLSFMXXXXXXXXXXXXXXXGGPLLLMELAFLLRGVGTKVNWITIQKPSEE 118
+ ++ +PL FM GGPLLLMELAFLLRGV ++V WIT QKP EE
Sbjct: 61 IQSVSGSLNPLEFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVESEVVWITNQKPVEE 120
Query: 119 DEVIYSLEHKMWDRGVQVISAKGQETINTALKADLIVLNTAVAGKWLDAVLKEDVPRVLP 178
DEVI LEHKM DRGVQVISAK Q+ I+TALK+DL+VLNTAVAGKWLDAVLK++VP+VLP
Sbjct: 121 DEVIKVLEHKMLDRGVQVISAKSQKAIDTALKSDLVVLNTAVAGKWLDAVLKDNVPKVLP 180
Query: 179 NVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLG 238
VLWWIHEMRGHYFK D VKHLP VAGAMIDSH TAEYWKNRT +RL IKMP TYVVHLG
Sbjct: 181 KVLWWIHEMRGHYFKPDLVKHLPFVAGAMIDSHATAEYWKNRTHDRLGIKMPKTYVVHLG 240
Query: 239 NSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESXXX 298
NSKELMEVAED+ AK VLRE VRESLGVRNED+LF IINSVSRGKGQDLFL +F+ES
Sbjct: 241 NSKELMEVAEDSFAKNVLREQVRESLGVRNEDILFGIINSVSRGKGQDLFLRAFHESLKV 300
Query: 299 XXXXXXX-VPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAI 357
VP++HAV++GSDM+AQTKFE+ELRN+V + K+Q VHFVNKT+ VAPYLAAI
Sbjct: 301 IKETKKLEVPTMHAVVVGSDMSAQTKFETELRNFVQEMKLQKIVHFVNKTMKVAPYLAAI 360
Query: 358 DVLVQNSQAWGECFGRITIEAMAFQLPVLLQKCLYQGTAAGGTTEIVVNGTTGLLHPVGK 417
DVLVQNSQA GECFGRITIEAMAF+LPVL GTAAGGT EIVVN TTGLLH GK
Sbjct: 361 DVLVQNSQARGECFGRITIEAMAFKLPVL-------GTAAGGTMEIVVNRTTGLLHNTGK 413
Query: 418 EGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIA 462
+G+ PLAKNIVKLAT+V+ R TMGK+GYERVKE+F EHHM+ RIA
Sbjct: 414 DGVLPLAKNIVKLATNVKMRNTMGKKGYERVKEMFLEHHMSHRIA 458
>TAIR|locus:2093925 [details] [associations]
symbol:AT3G15940 species:3702 "Arabidopsis thaliana"
[GO:0009058 "biosynthetic process" evidence=IEA] [GO:0016757
"transferase activity, transferring glycosyl groups" evidence=ISS]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0001666 "response
to hypoxia" evidence=RCA] [GO:0019375 "galactolipid biosynthetic
process" evidence=RCA] InterPro:IPR001296 Pfam:PF00534
GO:GO:0005794 EMBL:CP002686 GO:GO:0009058 GO:GO:0016740 CAZy:GT4
EMBL:AB026653 EMBL:AY091763 EMBL:AJ507211 IPI:IPI00545618
RefSeq:NP_001189906.1 RefSeq:NP_188215.1 UniGene:At.38967
ProteinModelPortal:Q9LSB5 STRING:Q9LSB5 PRIDE:Q9LSB5
EnsemblPlants:AT3G15940.1 EnsemblPlants:AT3G15940.2 GeneID:820838
KEGG:ath:AT3G15940 TAIR:At3g15940 HOGENOM:HOG000090291
InParanoid:Q9LSB5 OMA:QWFRSNR PhylomeDB:Q9LSB5
ProtClustDB:CLSN2679727 Genevestigator:Q9LSB5 Uniprot:Q9LSB5
Length = 697
Score = 254 (94.5 bits), Expect = 6.5e-34, Sum P(2) = 6.5e-34
Identities = 61/148 (41%), Positives = 88/148 (59%)
Query: 314 IGSDMNAQTKFESELRNYVMQK-KIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFG 372
+GS N + + E+ +++ + + V + T VA +A DV V NSQ GE FG
Sbjct: 547 VGSKSN-KVAYVKEMLSFLSNNGNLSNSVLWTPATTRVASLYSAADVYVTNSQGVGETFG 605
Query: 373 RITIEAMAFQLPVLLQKCLYQGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLAT 432
R+TIEAMA+ LPVL GT AGGT EIV + TGLLHPVG+ G LA+N++ L
Sbjct: 606 RVTIEAMAYGLPVL-------GTDAGGTKEIVEHNVTGLLHPVGRAGNKVLAQNLLFLLR 658
Query: 433 HVERRLTMGKRGYERVKEIFQEHHMAER 460
+ RL +G +G E V++++ + HM +R
Sbjct: 659 NPSTRLQLGSQGREIVEKMYMKQHMYKR 686
Score = 187 (70.9 bits), Expect = 6.5e-34, Sum P(2) = 6.5e-34
Identities = 58/217 (26%), Positives = 105/217 (48%)
Query: 88 GGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINT 147
G P+ +MELA L G V + + + L ++ R ++V+ KG+ + T
Sbjct: 249 GAPISMMELASELLSCGATVYAVVLSRRG-------GLLQELTRRRIKVVEDKGELSFKT 301
Query: 148 ALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFK-----LDYVKHLPL 202
A+KADL++ +AV W+D + P + WW+ E R YF LD VK L
Sbjct: 302 AMKADLVIAGSAVCASWIDQYMDHH-PAGGSQIAWWVMENRREYFDRAKPVLDRVKLLIF 360
Query: 203 VAGAMIDSHVT---AEYWKNRTRERL-RIKMPD--TYVVHLGNSKELMEVAEDNVAKR-- 254
++ +T ++ K R++ + + + D +V + +S + ++ + ++
Sbjct: 361 LSEVQSKQWLTWCEEDHVKLRSQPVIVPLSVNDELAFVAGVSSSLNTPTLTQETMKEKRQ 420
Query: 255 VLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHS 291
LRE VR G+ ++D+L ++S++ GKGQ L L S
Sbjct: 421 KLRESVRTEFGLTDKDMLVMSLSSINPGKGQLLLLES 457
Score = 45 (20.9 bits), Expect = 4.6e-19, Sum P(2) = 4.6e-19
Identities = 9/35 (25%), Positives = 19/35 (54%)
Query: 249 DNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGK 283
++VA + RE +E + RN+ + +N + + K
Sbjct: 456 ESVALALEREQTQEQVAKRNQSKIIKNLNGIRKEK 490
>TAIR|locus:2018144 [details] [associations]
symbol:AT1G52420 species:3702 "Arabidopsis thaliana"
[GO:0009058 "biosynthetic process" evidence=IEA] [GO:0016757
"transferase activity, transferring glycosyl groups" evidence=ISS]
[GO:0001666 "response to hypoxia" evidence=RCA] [GO:0019375
"galactolipid biosynthetic process" evidence=RCA]
InterPro:IPR001296 Pfam:PF00534 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009058 GO:GO:0016740 EMBL:AC037424
eggNOG:COG0438 CAZy:GT4 EMBL:AC008016 HOGENOM:HOG000090291
ProtClustDB:CLSN2679727 EMBL:BT002514 EMBL:BT008418 EMBL:AK227148
IPI:IPI00539314 PIR:E96564 RefSeq:NP_175651.1 UniGene:At.43422
ProteinModelPortal:Q9SSP6 PaxDb:Q9SSP6 PRIDE:Q9SSP6
EnsemblPlants:AT1G52420.1 GeneID:841673 KEGG:ath:AT1G52420
TAIR:At1g52420 InParanoid:Q9SSP6 OMA:CEEEHIK PhylomeDB:Q9SSP6
ArrayExpress:Q9SSP6 Genevestigator:Q9SSP6 Uniprot:Q9SSP6
Length = 670
Score = 227 (85.0 bits), Expect = 8.0e-32, Sum P(2) = 8.0e-32
Identities = 55/148 (37%), Positives = 84/148 (56%)
Query: 314 IGSDMNAQTKFESELRNYVMQK-KIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFG 372
+GS N + + E+ +++ + V + T VA +A DV V NSQ GE FG
Sbjct: 520 VGSKSN-KVGYVKEMLSFLSNSGNLSKSVMWTPATTRVASLYSAADVYVTNSQGVGETFG 578
Query: 373 RITIEAMAFQLPVLLQKCLYQGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLAT 432
R+TIEAMA+ L V+ GT AGGT E+V + TGLLH +G+ G LA N++ L
Sbjct: 579 RVTIEAMAYGLAVV-------GTDAGGTKEMVQHNMTGLLHSMGRSGNKELAHNLLYLLR 631
Query: 433 HVERRLTMGKRGYERVKEIFQEHHMAER 460
+ + RL +G G + V++++ + HM +R
Sbjct: 632 NPDERLRLGSEGRKMVEKMYMKQHMYKR 659
Score = 197 (74.4 bits), Expect = 8.0e-32, Sum P(2) = 8.0e-32
Identities = 62/217 (28%), Positives = 107/217 (49%)
Query: 88 GGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINT 147
G P+ +MELA L G V+ + + + L ++ R ++V+ KG+ + T
Sbjct: 247 GAPISMMELASELLSCGATVSAVVLSRRG-------GLMQELSRRRIKVVEDKGELSFKT 299
Query: 148 ALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFK-----LDYVKHLPL 202
A+KADLI+ +AV W+D + P + WWI E R YF LD VK L
Sbjct: 300 AMKADLIIAGSAVCTSWIDQYMNHH-PAGGSQIAWWIMENRREYFDRAKPVLDRVKMLIF 358
Query: 203 VAGAMIDSHVT---AEYWKNRTRERL-RIKMPD--TYVVHLGNSKELMEVAEDN--VAKR 254
++ + +T E+ K R++ + + + D +V + +S ++ + V ++
Sbjct: 359 LSESQSRQWLTWCEEEHIKLRSQPVIVPLSVNDELAFVAGIPSSLNTPTLSPEKMRVKRQ 418
Query: 255 VLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHS 291
+LRE VR LG+ + D+L ++S++ KGQ L L S
Sbjct: 419 ILRESVRTELGITDSDMLVMSLSSINPTKGQLLLLES 455
>TIGR_CMR|BA_1558 [details] [associations]
symbol:BA_1558 "glycosyl transferase, group 1 family
protein" species:198094 "Bacillus anthracis str. Ames" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016757
"transferase activity, transferring glycosyl groups" evidence=ISS]
InterPro:IPR001296 Pfam:PF00534 GO:GO:0009058 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0016740
CAZy:GT4 HOGENOM:HOG000077287 InterPro:IPR023881 TIGRFAMs:TIGR03999
RefSeq:NP_844008.1 RefSeq:YP_018181.1 RefSeq:YP_027714.1 PDB:2JJM
PDB:3MBO PDBsum:2JJM PDBsum:3MBO ProteinModelPortal:Q81ST7
DNASU:1086392 EnsemblBacteria:EBBACT00000010235
EnsemblBacteria:EBBACT00000017248 EnsemblBacteria:EBBACT00000022563
GeneID:1086392 GeneID:2815635 GeneID:2850809 KEGG:ban:BA_1558
KEGG:bar:GBAA_1558 KEGG:bat:BAS1445 OMA:EYGIREN
ProtClustDB:CLSK2391390 BioCyc:BANT260799:GJAJ-1519-MONOMER
BioCyc:BANT261594:GJ7F-1582-MONOMER EvolutionaryTrace:Q81ST7
Uniprot:Q81ST7
Length = 381
Score = 141 (54.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 43/124 (34%), Positives = 63/124 (50%)
Query: 337 IQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLLQKCLYQGTA 396
I+DRV F+ K VA LA D+++ S+ E FG + +EAMA +P C+ GT
Sbjct: 252 IEDRVLFLGKQDNVAELLAMSDLMLLLSEK--ESFGLVLLEAMACGVP-----CI--GTR 302
Query: 397 AGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHH 456
GG E++ +G TG L VG T +A ++L E MG+R E V E F+
Sbjct: 303 VGGIPEVIQHGDTGYLCEVGDT--TGVADQAIQLLKDEELHRNMGERARESVYEQFRSEK 360
Query: 457 MAER 460
+ +
Sbjct: 361 IVSQ 364
>TIGR_CMR|CHY_1134 [details] [associations]
symbol:CHY_1134 "glycosyl transferase, group 1 family"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000271 "polysaccharide biosynthetic process" evidence=ISS]
[GO:0016757 "transferase activity, transferring glycosyl groups"
evidence=ISS] InterPro:IPR001296 Pfam:PF00534 GO:GO:0009058
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0016740
eggNOG:COG0438 CAZy:GT4 RefSeq:YP_359980.1
ProteinModelPortal:Q3AD04 STRING:Q3AD04 GeneID:3726576
KEGG:chy:CHY_1134 PATRIC:21275408 HOGENOM:HOG000077287 OMA:YLPITRF
BioCyc:CHYD246194:GJCN-1133-MONOMER InterPro:IPR023881
TIGRFAMs:TIGR03999 Uniprot:Q3AD04
Length = 378
Score = 136 (52.9 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 41/125 (32%), Positives = 64/125 (51%)
Query: 330 NYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLLQK 389
N V +K + ++V F+ K V+ L+ DVL+ S+ E FG + +EAMA ++PV+ +
Sbjct: 247 NEVQKKNLTNKVKFLGKMPKVSDVLSISDVLLITSET--ESFGLVALEAMAMEVPVVAYR 304
Query: 390 CLYQGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVK 449
GG E+VV+G TG L V + A+ +VKL + G+ G R K
Sbjct: 305 -------VGGLPEVVVDGQTGYL--VDYLDLEKAAEAVVKLLKEPWLKRDFGRWGRIRAK 355
Query: 450 EIFQE 454
E F +
Sbjct: 356 ERFSK 360
>TIGR_CMR|CPS_4999 [details] [associations]
symbol:CPS_4999 "glycosyl transferase, group 1 family
protein" species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016757
"transferase activity, transferring glycosyl groups" evidence=ISS]
InterPro:IPR001296 Pfam:PF00534 GO:GO:0009058 GO:GO:0016740
EMBL:CP000083 GenomeReviews:CP000083_GR eggNOG:COG0438 CAZy:GT4
RefSeq:YP_271638.1 ProteinModelPortal:Q47U85 STRING:Q47U85
DNASU:3523069 GeneID:3523069 KEGG:cps:CPS_4999 PATRIC:21472785
OMA:CISKPES BioCyc:CPSY167879:GI48-5000-MONOMER Uniprot:Q47U85
Length = 367
Score = 125 (49.1 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 46/155 (29%), Positives = 70/155 (45%)
Query: 306 VPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQ 365
+P++H I G D AQ K +L V + +I + V F+ + +L A D+ +Q S
Sbjct: 217 MPALHLYIAG-DGAAQEK--QKLTELVNKLQINENVTFLGQINNAFSWLEACDIFIQPSV 273
Query: 366 AWGECFGRITIEAMAFQLPVLLQKCLYQGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAK 425
E FG + +EA A PV+ T GG EI+V+ TGLL V +
Sbjct: 274 E--EAFGLVFVEAGAKAKPVI-------ATTVGGIKEIIVSKETGLL--VLPSSPKAVEH 322
Query: 426 NIVKLATHVERRLTMGKRGYERVKEIFQEHHMAER 460
+ L R G+ GY+R+ E F +M +
Sbjct: 323 ALAILINSPPLRQQYGENGYKRITEHFSLTNMVNK 357
>UNIPROTKB|Q47WI9 [details] [associations]
symbol:CPS_4182 "Putative lipopolysaccharide core
biosynthesis mannosyltransferase" species:167879 "Colwellia
psychrerythraea 34H" [GO:0000030 "mannosyltransferase activity"
evidence=ISS] [GO:0009244 "lipopolysaccharide core region
biosynthetic process" evidence=ISS] InterPro:IPR001296 Pfam:PF00534
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0009244
eggNOG:COG0438 CAZy:GT4 GO:GO:0000030 RefSeq:YP_270833.1
ProteinModelPortal:Q47WI9 STRING:Q47WI9 DNASU:3523255
GeneID:3523255 KEGG:cps:CPS_4182 PATRIC:21471227
HOGENOM:HOG000065557 OMA:RKQKGVH ProtClustDB:CLSK881566
BioCyc:CPSY167879:GI48-4192-MONOMER Uniprot:Q47WI9
Length = 364
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 50/191 (26%), Positives = 86/191 (45%)
Query: 274 AIINSVSRGKGQDLFLHSFYESXXXXXXXXXXVPSVHAVIIGSDMNAQTKFESELRNYVM 333
AI+ V + KG LF+ S + P AVI+GS ++ F +EL++ +
Sbjct: 185 AILGRVRKQKGVHLFVESCIDILKDR-------PDYTAVIVGSISSSNESFVNELQSKID 237
Query: 334 QKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLLQKCL 391
Q + +R+ F + + +++ ++V S+ E FG +EAM+ VL +
Sbjct: 238 QAGLTERIVFAGEQNFADIPKIFSSLSLVVALSE--NEGFGLTILEAMSSGAAVLASE-- 293
Query: 392 YQGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEI 451
AG E+V G G + P+ + + + + L E+ + MG+ G ERV E
Sbjct: 294 -----AGAWPEVVRQGVDGYVVPIND--LDAVTEKMSLLLADEEKLMQMGRDGRERVLE- 345
Query: 452 FQEHHMAERIA 462
H+ ER A
Sbjct: 346 ---HYSVEREA 353
>TIGR_CMR|CPS_4182 [details] [associations]
symbol:CPS_4182 "putative lipopolysaccharide core
biosynthesis mannosyltransferase" species:167879 "Colwellia
psychrerythraea 34H" [GO:0000030 "mannosyltransferase activity"
evidence=ISS] [GO:0009244 "lipopolysaccharide core region
biosynthetic process" evidence=ISS] InterPro:IPR001296 Pfam:PF00534
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0009244
eggNOG:COG0438 CAZy:GT4 GO:GO:0000030 RefSeq:YP_270833.1
ProteinModelPortal:Q47WI9 STRING:Q47WI9 DNASU:3523255
GeneID:3523255 KEGG:cps:CPS_4182 PATRIC:21471227
HOGENOM:HOG000065557 OMA:RKQKGVH ProtClustDB:CLSK881566
BioCyc:CPSY167879:GI48-4192-MONOMER Uniprot:Q47WI9
Length = 364
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 50/191 (26%), Positives = 86/191 (45%)
Query: 274 AIINSVSRGKGQDLFLHSFYESXXXXXXXXXXVPSVHAVIIGSDMNAQTKFESELRNYVM 333
AI+ V + KG LF+ S + P AVI+GS ++ F +EL++ +
Sbjct: 185 AILGRVRKQKGVHLFVESCIDILKDR-------PDYTAVIVGSISSSNESFVNELQSKID 237
Query: 334 QKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLLQKCL 391
Q + +R+ F + + +++ ++V S+ E FG +EAM+ VL +
Sbjct: 238 QAGLTERIVFAGEQNFADIPKIFSSLSLVVALSE--NEGFGLTILEAMSSGAAVLASE-- 293
Query: 392 YQGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEI 451
AG E+V G G + P+ + + + + L E+ + MG+ G ERV E
Sbjct: 294 -----AGAWPEVVRQGVDGYVVPIND--LDAVTEKMSLLLADEEKLMQMGRDGRERVLE- 345
Query: 452 FQEHHMAERIA 462
H+ ER A
Sbjct: 346 ---HYSVEREA 353
>TIGR_CMR|CHY_1814 [details] [associations]
symbol:CHY_1814 "glycosyltransferase, group 1 family"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000271 "polysaccharide biosynthetic process" evidence=ISS]
[GO:0016757 "transferase activity, transferring glycosyl groups"
evidence=ISS] InterPro:IPR001296 Pfam:PF00534 GO:GO:0009058
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0016740
eggNOG:COG0438 CAZy:GT4 RefSeq:YP_360634.1
ProteinModelPortal:Q3AB50 STRING:Q3AB50 GeneID:3726547
KEGG:chy:CHY_1814 PATRIC:21276735 HOGENOM:HOG000077290 OMA:VMAKETN
BioCyc:CHYD246194:GJCN-1813-MONOMER Uniprot:Q3AB50
Length = 369
Score = 118 (46.6 bits), Expect = 0.00041, P = 0.00041
Identities = 44/152 (28%), Positives = 71/152 (46%)
Query: 309 VHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWG 368
V IIG D ++EL+ + I+ V F A + ID+ V S + G
Sbjct: 223 VFRAIIGGD----GPLKNELKELAKELGIESLVTFPGYIPNPAEFYREIDIFVLPSISEG 278
Query: 369 ECFGRITIEAMAFQLPVLLQKCLYQGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIV 428
+EAM+++L V+ T GG E++ +G GLL P K+ T L + +
Sbjct: 279 LPLS--LLEAMSWKLAVI-------ATNVGGIPEVINSGENGLLVPP-KDA-TALTEALY 327
Query: 429 KLATHVERRLTMGKRGYERVKEIFQEHHMAER 460
L + RL++G+R Y ++E + HMA+R
Sbjct: 328 TLIFNENFRLSLGERAYITIREKYNVAHMAQR 359
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.135 0.405 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 477 440 0.00089 118 3 11 22 0.36 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 10
No. of states in DFA: 623 (66 KB)
Total size of DFA: 272 KB (2143 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 31.10u 0.10s 31.20t Elapsed: 00:00:01
Total cpu time: 31.10u 0.10s 31.20t Elapsed: 00:00:01
Start: Sat May 11 13:02:45 2013 End: Sat May 11 13:02:46 2013