Query 011781
Match_columns 477
No_of_seqs 744 out of 3371
Neff 10.5
Searched_HMMs 46136
Date Fri Mar 29 05:09:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011781.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011781hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2271 UhpC Sugar phosphate p 100.0 4.3E-35 9.2E-40 268.8 25.4 356 112-476 27-387 (448)
2 COG2814 AraJ Arabinose efflux 100.0 6E-32 1.3E-36 251.9 32.9 329 113-476 12-340 (394)
3 PRK14995 methyl viologen resis 100.0 2.9E-31 6.3E-36 266.3 35.5 353 111-475 3-391 (495)
4 PRK09556 uhpT sugar phosphate 100.0 1.2E-32 2.6E-37 274.7 24.1 353 113-476 28-390 (467)
5 KOG2532 Permease of the major 100.0 1.3E-31 2.9E-36 260.6 30.7 331 142-476 66-398 (466)
6 TIGR00894 2A0114euk Na(+)-depe 100.0 3.4E-31 7.4E-36 264.5 31.8 362 109-476 14-401 (465)
7 TIGR02332 HpaX 4-hydroxyphenyl 100.0 7.1E-31 1.5E-35 257.4 32.3 287 112-402 6-309 (412)
8 PRK03545 putative arabinose tr 100.0 1.3E-30 2.8E-35 254.4 32.8 326 113-475 8-333 (390)
9 TIGR00893 2A0114 d-galactonate 100.0 6.6E-31 1.4E-35 257.0 29.5 347 124-476 4-352 (399)
10 PRK11663 regulatory protein Uh 100.0 1.5E-30 3.2E-35 257.2 31.5 286 112-402 21-309 (434)
11 PF07690 MFS_1: Major Facilita 100.0 6.7E-31 1.5E-35 252.9 24.5 334 120-476 2-340 (352)
12 TIGR00711 efflux_EmrB drug res 100.0 6.3E-30 1.4E-34 257.3 32.1 351 114-476 2-389 (485)
13 TIGR01299 synapt_SV2 synaptic 100.0 1.1E-29 2.4E-34 259.6 32.5 184 110-294 163-359 (742)
14 PRK10406 alpha-ketoglutarate t 100.0 3.2E-29 7E-34 247.6 34.5 331 114-476 22-377 (432)
15 PLN00028 nitrate transmembrane 100.0 5.1E-29 1.1E-33 248.5 36.0 345 113-476 35-388 (476)
16 TIGR00900 2A0121 H+ Antiporter 100.0 1.4E-29 3.1E-34 244.9 31.0 334 119-476 4-342 (365)
17 TIGR00710 efflux_Bcr_CflA drug 100.0 3E-29 6.4E-34 244.7 32.3 268 113-402 4-272 (385)
18 TIGR00891 2A0112 putative sial 100.0 4.5E-29 9.7E-34 245.0 33.5 356 110-476 8-369 (405)
19 TIGR00903 2A0129 major facilit 100.0 3.5E-29 7.6E-34 240.4 30.4 317 126-476 3-321 (368)
20 TIGR00881 2A0104 phosphoglycer 100.0 6.2E-30 1.3E-34 248.7 25.4 346 122-476 3-351 (379)
21 PRK11551 putative 3-hydroxyphe 100.0 1.2E-28 2.6E-33 242.1 34.1 334 111-476 12-349 (406)
22 PRK10213 nepI ribonucleoside t 100.0 2.7E-28 5.8E-33 237.7 35.6 324 112-474 18-343 (394)
23 PRK12307 putative sialic acid 100.0 7E-29 1.5E-33 245.4 31.1 278 112-402 16-296 (426)
24 PRK03699 putative transporter; 100.0 2E-28 4.3E-33 239.2 33.5 329 111-475 4-333 (394)
25 TIGR00890 2A0111 Oxalate/Forma 100.0 5.7E-29 1.2E-33 241.8 29.5 319 128-476 17-336 (377)
26 TIGR00886 2A0108 nitrite extru 100.0 1.1E-28 2.3E-33 239.0 31.2 340 118-476 5-358 (366)
27 PRK15402 multidrug efflux syst 100.0 1.2E-28 2.6E-33 241.9 31.8 332 113-475 12-348 (406)
28 PRK09705 cynX putative cyanate 100.0 1.8E-28 4E-33 239.0 31.2 324 112-475 8-333 (393)
29 PRK11273 glpT sn-glycerol-3-ph 100.0 1.9E-28 4E-33 243.5 31.7 285 113-402 28-319 (452)
30 PRK10642 proline/glycine betai 100.0 3E-28 6.5E-33 244.3 33.3 343 113-475 15-382 (490)
31 PRK10504 putative transporter; 100.0 7.2E-28 1.6E-32 241.2 35.8 351 114-475 10-393 (471)
32 PRK10091 MFS transport protein 100.0 2.4E-28 5.2E-33 237.6 31.0 262 114-402 3-265 (382)
33 PRK11652 emrD multidrug resist 100.0 1.5E-27 3.3E-32 233.2 34.4 331 112-475 6-338 (394)
34 PRK15034 nitrate/nitrite trans 100.0 7.1E-28 1.5E-32 232.9 30.9 261 113-402 33-316 (462)
35 COG2223 NarK Nitrate/nitrite t 100.0 2.8E-28 6.1E-33 224.6 26.5 333 112-475 12-353 (417)
36 PRK10133 L-fucose transporter; 100.0 2.5E-27 5.5E-32 233.4 34.8 332 114-475 26-386 (438)
37 PRK15075 citrate-proton sympor 100.0 2.2E-27 4.7E-32 234.7 34.5 334 112-475 13-371 (434)
38 TIGR00897 2A0118 polyol permea 100.0 1.4E-27 3E-32 233.8 32.6 334 114-475 13-354 (402)
39 PRK11102 bicyclomycin/multidru 100.0 1.5E-27 3.2E-32 232.0 31.1 255 128-402 5-260 (377)
40 PRK11043 putative transporter; 100.0 3.4E-27 7.3E-32 231.4 33.6 325 116-475 8-335 (401)
41 TIGR00895 2A0115 benzoate tran 100.0 9.3E-28 2E-32 235.0 29.5 353 112-476 15-379 (398)
42 TIGR00712 glpT glycerol-3-phos 100.0 1E-27 2.2E-32 237.4 29.8 287 113-402 26-317 (438)
43 TIGR00892 2A0113 monocarboxyla 100.0 1.9E-27 4.2E-32 235.9 30.6 356 112-476 17-374 (455)
44 PRK15403 multidrug efflux syst 100.0 9.6E-27 2.1E-31 228.1 33.4 262 117-399 19-281 (413)
45 PRK11195 lysophospholipid tran 100.0 6.2E-27 1.3E-31 228.1 30.4 326 118-475 7-334 (393)
46 TIGR00885 fucP L-fucose:H+ sym 100.0 1.9E-26 4.1E-31 225.2 32.9 321 116-468 5-354 (410)
47 KOG1330 Sugar transporter/spin 100.0 4.6E-29 9.9E-34 231.4 13.5 352 112-475 31-389 (493)
48 PRK10489 enterobactin exporter 100.0 1.1E-27 2.4E-32 236.0 24.2 327 119-476 22-353 (417)
49 PRK03893 putative sialic acid 100.0 8.1E-27 1.8E-31 235.3 31.0 290 111-402 17-341 (496)
50 TIGR00899 2A0120 sugar efflux 100.0 1.8E-26 3.9E-31 224.2 31.6 319 121-475 4-327 (375)
51 PRK05122 major facilitator sup 100.0 1.2E-26 2.6E-31 227.4 30.5 320 114-475 15-342 (399)
52 PRK09952 shikimate transporter 100.0 3.4E-26 7.3E-31 226.1 33.9 273 111-402 19-316 (438)
53 PRK10473 multidrug efflux syst 100.0 6.4E-26 1.4E-30 221.6 34.2 266 114-402 3-269 (392)
54 TIGR00879 SP MFS transporter, 100.0 9.9E-27 2.1E-31 233.5 29.0 351 116-476 30-424 (481)
55 PRK12382 putative transporter; 100.0 3.1E-26 6.7E-31 223.9 31.0 320 115-476 16-343 (392)
56 PRK11646 multidrug resistance 100.0 5.8E-26 1.3E-30 221.8 32.8 322 119-476 15-338 (400)
57 PRK03633 putative MFS family t 100.0 3.9E-26 8.4E-31 222.1 31.4 260 114-402 6-265 (381)
58 PRK10077 xylE D-xylose transpo 100.0 2.3E-26 4.9E-31 231.0 29.8 353 112-476 10-405 (479)
59 KOG2533 Permease of the major 100.0 2.6E-27 5.7E-32 231.0 22.2 284 115-399 46-336 (495)
60 cd06174 MFS The Major Facilita 100.0 1.1E-25 2.5E-30 216.3 31.1 303 118-476 3-306 (352)
61 TIGR00896 CynX cyanate transpo 100.0 3.7E-26 8E-31 220.2 27.4 310 128-475 14-326 (355)
62 PRK09874 drug efflux system pr 100.0 2E-25 4.4E-30 219.4 32.1 329 114-475 14-351 (408)
63 TIGR00902 2A0127 phenyl propri 100.0 2.5E-25 5.4E-30 216.4 31.0 323 119-475 9-332 (382)
64 TIGR00901 2A0125 AmpG-related 99.9 2.8E-25 6.1E-30 214.2 29.8 318 130-476 4-350 (356)
65 PF05977 MFS_3: Transmembrane 99.9 2.1E-25 4.6E-30 221.1 29.4 335 114-476 10-348 (524)
66 PRK10054 putative transporter; 99.9 1.8E-25 3.9E-30 218.0 26.9 324 116-474 9-337 (395)
67 TIGR00883 2A0106 metabolite-pr 99.9 3.9E-25 8.4E-30 216.1 29.3 322 125-475 4-352 (394)
68 TIGR00887 2A0109 phosphate:H+ 99.9 4.8E-25 1E-29 222.0 30.0 289 112-402 14-365 (502)
69 PRK06814 acylglycerophosphoeth 99.9 4.3E-25 9.2E-30 243.8 31.7 304 149-476 52-375 (1140)
70 PRK11128 putative 3-phenylprop 99.9 1.1E-24 2.5E-29 211.8 30.9 316 123-475 13-332 (382)
71 TIGR00805 oat sodium-independe 99.9 3.7E-26 8.1E-31 233.2 21.0 285 117-402 36-397 (633)
72 PRK15011 sugar efflux transpor 99.9 4.4E-24 9.5E-29 208.4 33.4 319 118-475 19-344 (393)
73 TIGR00898 2A0119 cation transp 99.9 3.7E-25 8.1E-30 223.6 25.8 325 135-476 110-451 (505)
74 PRK11010 ampG muropeptide tran 99.9 4.1E-24 8.8E-29 213.6 32.6 264 118-402 16-289 (491)
75 COG0738 FucP Fucose permease [ 99.9 1.3E-23 2.8E-28 192.5 31.2 326 115-472 14-360 (422)
76 PRK08633 2-acyl-glycerophospho 99.9 8.4E-24 1.8E-28 234.3 32.6 333 119-475 14-362 (1146)
77 PRK11902 ampG muropeptide tran 99.9 2.9E-23 6.3E-28 203.4 31.7 263 119-402 4-276 (402)
78 TIGR00924 yjdL_sub1_fam amino 99.9 1.9E-22 4.2E-27 200.5 34.1 357 114-476 10-422 (475)
79 KOG2504 Monocarboxylate transp 99.9 4E-23 8.7E-28 203.9 28.2 353 113-476 45-429 (509)
80 TIGR00882 2A0105 oligosacchari 99.9 1.1E-22 2.5E-27 198.9 30.4 270 116-402 4-284 (396)
81 PRK10207 dipeptide/tripeptide 99.9 4.6E-22 1E-26 197.9 34.1 358 114-476 14-420 (489)
82 PRK09528 lacY galactoside perm 99.9 4.4E-23 9.6E-28 203.4 26.4 330 118-474 14-354 (420)
83 TIGR00806 rfc RFC reduced fola 99.9 3.1E-22 6.7E-27 189.9 30.8 337 128-476 40-394 (511)
84 COG2807 CynX Cyanate permease 99.9 3.8E-22 8.3E-27 180.1 28.1 317 121-475 19-337 (395)
85 PF06609 TRI12: Fungal trichot 99.9 1.2E-21 2.6E-26 193.5 30.7 341 126-476 56-446 (599)
86 TIGR02718 sider_RhtX_FptX side 99.9 2.5E-21 5.4E-26 189.0 31.6 264 116-402 3-274 (390)
87 KOG3764 Vesicular amine transp 99.9 3.3E-23 7.1E-28 188.4 15.9 238 141-402 98-336 (464)
88 TIGR00889 2A0110 nucleoside tr 99.9 1.7E-21 3.6E-26 191.2 27.5 322 119-476 7-349 (418)
89 TIGR00792 gph sugar (Glycoside 99.9 3.3E-21 7.1E-26 191.3 25.0 317 128-475 13-358 (437)
90 KOG2615 Permease of the major 99.9 3.6E-21 7.9E-26 174.1 21.9 321 140-476 59-393 (451)
91 PRK09584 tppB putative tripept 99.9 6.6E-20 1.4E-24 183.5 31.2 168 116-283 23-194 (500)
92 KOG0569 Permease of the major 99.9 3.8E-20 8.3E-25 178.4 27.7 317 151-476 62-409 (485)
93 KOG0254 Predicted transporter 99.9 4.1E-20 8.8E-25 186.3 29.1 316 150-476 90-436 (513)
94 PRK15462 dipeptide/tripeptide 99.9 1.9E-18 4E-23 169.5 33.6 356 114-475 9-417 (493)
95 PTZ00207 hypothetical protein; 99.9 1.6E-18 3.4E-23 172.7 31.6 338 128-473 41-489 (591)
96 KOG0255 Synaptic vesicle trans 99.8 2.6E-19 5.7E-24 181.4 24.0 318 141-475 110-446 (521)
97 PF03825 Nuc_H_symport: Nucleo 99.8 3.5E-18 7.7E-23 164.9 29.9 326 119-475 7-341 (400)
98 TIGR01301 GPH_sucrose GPH fami 99.8 5.6E-18 1.2E-22 165.5 29.2 337 118-475 8-422 (477)
99 KOG4686 Predicted sugar transp 99.8 1.7E-20 3.7E-25 162.7 7.8 336 114-476 44-393 (459)
100 KOG0253 Synaptic vesicle trans 99.8 1.5E-17 3.2E-22 149.9 25.8 182 112-296 76-257 (528)
101 PRK09669 putative symporter Ya 99.8 7.9E-18 1.7E-22 167.1 26.9 305 130-465 25-348 (444)
102 TIGR00788 fbt folate/biopterin 99.8 2.8E-18 6E-23 170.4 22.9 347 114-476 26-392 (468)
103 PF01306 LacY_symp: LacY proto 99.8 2.1E-17 4.6E-22 156.5 26.3 335 114-475 7-352 (412)
104 PF13347 MFS_2: MFS/sugar tran 99.8 2.6E-18 5.7E-23 169.7 20.9 302 135-465 23-344 (428)
105 PRK10429 melibiose:sodium symp 99.8 3.6E-17 7.8E-22 163.5 27.0 264 120-402 12-296 (473)
106 KOG0252 Inorganic phosphate tr 99.8 9.9E-19 2.2E-23 162.3 13.3 354 112-476 39-447 (538)
107 TIGR01272 gluP glucose/galacto 99.8 3.8E-17 8.3E-22 153.3 24.0 246 199-475 6-269 (310)
108 PRK09848 glucuronide transport 99.8 9.3E-17 2E-21 159.7 26.2 259 121-402 15-294 (448)
109 PF11700 ATG22: Vacuole efflux 99.8 1.4E-15 3.1E-20 149.6 33.3 308 150-475 71-420 (477)
110 PF00083 Sugar_tr: Sugar (and 99.8 3.7E-22 7.9E-27 198.9 -13.7 278 121-402 7-316 (451)
111 KOG2563 Permease of the major 99.8 2.5E-16 5.4E-21 146.6 24.7 345 105-475 36-399 (480)
112 PRK11462 putative transporter; 99.7 2E-15 4.3E-20 149.9 29.9 257 121-402 16-293 (460)
113 PF03209 PUCC: PUCC protein; 99.7 4E-15 8.6E-20 138.5 27.7 311 140-475 6-341 (403)
114 COG3104 PTR2 Dipeptide/tripept 99.7 5.4E-15 1.2E-19 140.2 28.7 362 114-475 21-434 (498)
115 KOG3626 Organic anion transpor 99.7 1E-16 2.3E-21 159.6 17.8 289 113-402 96-459 (735)
116 COG2211 MelB Na+/melibiose sym 99.7 1.1E-14 2.5E-19 139.4 26.5 319 118-465 16-356 (467)
117 PF03137 OATP: Organic Anion T 99.7 3.5E-18 7.6E-23 170.3 -0.3 286 116-402 5-372 (539)
118 COG2270 Permeases of the major 99.7 1.5E-14 3.3E-19 134.2 23.0 304 148-475 57-381 (438)
119 TIGR00889 2A0110 nucleoside tr 99.6 6.4E-15 1.4E-19 144.7 16.3 159 132-290 226-402 (418)
120 PF05631 DUF791: Protein of un 99.6 2.6E-13 5.7E-18 124.5 25.1 253 123-398 43-304 (354)
121 PRK15011 sugar efflux transpor 99.6 1.7E-13 3.6E-18 133.9 20.4 160 130-291 232-392 (393)
122 PRK05122 major facilitator sup 99.6 2.7E-13 6E-18 132.8 21.0 162 130-294 232-393 (399)
123 TIGR00902 2A0127 phenyl propri 99.6 1.8E-13 4E-18 133.1 19.0 163 121-286 212-375 (382)
124 PRK10642 proline/glycine betai 99.6 4E-13 8.6E-18 135.1 21.8 170 126-295 262-435 (490)
125 COG2814 AraJ Arabinose efflux 99.6 2.5E-13 5.4E-18 127.6 18.4 182 109-292 207-388 (394)
126 PRK03545 putative arabinose tr 99.6 2.5E-13 5.5E-18 132.6 19.3 154 136-291 228-381 (390)
127 TIGR00890 2A0111 Oxalate/Forma 99.6 7.5E-14 1.6E-18 135.5 15.1 153 131-283 222-375 (377)
128 KOG2325 Predicted transporter/ 99.5 1E-12 2.2E-17 126.3 21.8 250 112-376 32-302 (488)
129 PRK09528 lacY galactoside perm 99.5 6.6E-14 1.4E-18 138.1 14.0 148 143-291 256-404 (420)
130 PRK11551 putative 3-hydroxyphe 99.5 2.5E-13 5.5E-18 133.4 18.1 161 129-290 235-396 (406)
131 TIGR00880 2_A_01_02 Multidrug 99.5 6.1E-14 1.3E-18 115.5 11.6 134 155-289 4-137 (141)
132 TIGR00899 2A0120 sugar efflux 99.5 4.5E-13 9.8E-18 130.1 19.5 154 134-289 219-373 (375)
133 PRK09874 drug efflux system pr 99.5 1.4E-13 3E-18 135.4 15.9 161 129-290 234-398 (408)
134 COG2271 UhpC Sugar phosphate p 99.5 5.5E-14 1.2E-18 130.3 12.1 186 106-291 244-435 (448)
135 TIGR01299 synapt_SV2 synaptic 99.5 5.8E-13 1.3E-17 137.3 19.9 139 153-293 599-737 (742)
136 TIGR00893 2A0114 d-galactonate 99.5 6.5E-13 1.4E-17 129.7 18.6 168 118-287 219-396 (399)
137 PRK10489 enterobactin exporter 99.5 3.2E-13 6.9E-18 133.2 16.3 161 132-293 241-403 (417)
138 cd06174 MFS The Major Facilita 99.5 7.3E-13 1.6E-17 127.1 18.3 165 123-288 184-350 (352)
139 KOG2816 Predicted transporter 99.5 3.6E-12 7.8E-17 124.2 22.6 339 113-475 21-370 (463)
140 PRK12382 putative transporter; 99.5 1.4E-12 3E-17 127.6 19.9 158 129-289 231-388 (392)
141 PRK03633 putative MFS family t 99.5 1.4E-12 3E-17 127.0 19.5 155 131-289 217-371 (381)
142 PRK09556 uhpT sugar phosphate 99.5 8.8E-13 1.9E-17 131.9 18.1 173 117-289 261-448 (467)
143 PRK03699 putative transporter; 99.5 1.4E-12 3E-17 127.6 19.0 169 121-291 212-381 (394)
144 PRK09705 cynX putative cyanate 99.5 3.8E-12 8.2E-17 124.3 21.3 164 124-289 215-380 (393)
145 PRK11273 glpT sn-glycerol-3-ph 99.5 6.9E-13 1.5E-17 132.1 15.7 176 119-294 258-439 (452)
146 PRK11663 regulatory protein Uh 99.5 1.7E-12 3.6E-17 128.6 18.3 171 120-290 249-424 (434)
147 TIGR00897 2A0118 polyol permea 99.5 1.7E-12 3.6E-17 127.3 18.0 167 121-289 229-400 (402)
148 TIGR00883 2A0106 metabolite-pr 99.5 5.8E-13 1.2E-17 130.1 13.6 163 118-280 223-391 (394)
149 PF01770 Folate_carrier: Reduc 99.5 9.7E-11 2.1E-15 110.8 27.8 333 134-476 24-381 (412)
150 PRK03893 putative sialic acid 99.5 2.1E-12 4.5E-17 130.5 17.5 149 133-281 294-444 (496)
151 PRK11010 ampG muropeptide tran 99.5 1.1E-11 2.4E-16 124.3 22.3 157 136-292 245-405 (491)
152 TIGR00892 2A0113 monocarboxyla 99.5 4.3E-13 9.4E-18 133.4 12.1 163 121-284 248-415 (455)
153 TIGR00879 SP MFS transporter, 99.4 2.8E-12 6.1E-17 128.7 17.0 177 113-289 283-469 (481)
154 PRK09952 shikimate transporter 99.4 5.8E-12 1.3E-16 124.8 18.4 165 127-291 263-434 (438)
155 TIGR00891 2A0112 putative sial 99.4 1.4E-12 2.9E-17 128.1 13.6 142 133-274 257-400 (405)
156 TIGR00887 2A0109 phosphate:H+ 99.4 1.7E-12 3.6E-17 131.0 14.5 166 129-294 303-493 (502)
157 PRK11128 putative 3-phenylprop 99.4 8.9E-12 1.9E-16 121.3 18.7 155 128-285 219-374 (382)
158 PF05977 MFS_3: Transmembrane 99.4 7.9E-12 1.7E-16 124.6 17.3 162 127-289 231-393 (524)
159 PF11700 ATG22: Vacuole efflux 99.4 1.6E-11 3.4E-16 121.2 19.1 179 114-293 281-471 (477)
160 PF03825 Nuc_H_symport: Nucleo 99.4 1.6E-11 3.5E-16 118.8 18.1 172 118-289 211-394 (400)
161 KOG0569 Permease of the major 99.4 3.9E-12 8.4E-17 123.3 13.5 191 105-296 261-461 (485)
162 TIGR00900 2A0121 H+ Antiporter 99.4 3.8E-12 8.2E-17 123.0 12.6 133 135-267 232-365 (365)
163 PRK10504 putative transporter; 99.4 2E-11 4.2E-16 122.5 18.0 150 119-268 266-418 (471)
164 PRK15075 citrate-proton sympor 99.4 1.9E-11 4.2E-16 121.0 16.5 149 121-269 245-398 (434)
165 PRK11902 ampG muropeptide tran 99.4 1.9E-11 4.2E-16 119.8 16.3 152 137-292 233-392 (402)
166 PF03092 BT1: BT1 family; Int 99.4 3.8E-11 8.3E-16 117.9 18.0 325 134-476 10-359 (433)
167 TIGR02718 sider_RhtX_FptX side 99.4 2.1E-11 4.6E-16 119.1 16.1 156 130-285 224-386 (390)
168 PRK12307 putative sialic acid 99.3 6.6E-11 1.4E-15 117.1 19.3 145 133-277 250-395 (426)
169 TIGR00882 2A0105 oligosacchari 99.3 2.2E-11 4.9E-16 119.2 15.6 142 145-287 250-392 (396)
170 PRK10213 nepI ribonucleoside t 99.3 8.6E-11 1.9E-15 114.7 19.6 146 136-283 239-384 (394)
171 TIGR01272 gluP glucose/galacto 99.3 8E-11 1.7E-15 110.6 18.6 159 116-278 142-303 (310)
172 PRK10091 MFS transport protein 99.3 5.2E-11 1.1E-15 116.0 17.9 151 137-289 223-375 (382)
173 TIGR00881 2A0104 phosphoglycer 99.3 1.6E-11 3.4E-16 119.3 14.2 155 118-272 220-379 (379)
174 TIGR00792 gph sugar (Glycoside 99.3 8.8E-12 1.9E-16 123.8 12.6 148 120-268 228-383 (437)
175 TIGR00895 2A0115 benzoate tran 99.3 7.7E-12 1.7E-16 122.3 11.9 141 121-262 257-397 (398)
176 PRK10077 xylE D-xylose transpo 99.3 4.8E-11 1E-15 120.0 17.6 163 127-289 284-456 (479)
177 PF06963 FPN1: Ferroportin1 (F 99.3 4.4E-09 9.6E-14 101.5 30.0 351 115-475 3-396 (432)
178 COG2223 NarK Nitrate/nitrite t 99.3 3.3E-11 7.1E-16 112.3 14.2 176 116-292 220-403 (417)
179 PLN00028 nitrate transmembrane 99.3 1.8E-11 4E-16 122.4 13.6 158 133-293 271-436 (476)
180 PRK15402 multidrug efflux syst 99.3 6E-11 1.3E-15 116.6 17.1 154 132-286 233-391 (406)
181 TIGR00712 glpT glycerol-3-phos 99.3 4E-11 8.6E-16 119.0 15.3 162 128-289 265-432 (438)
182 TIGR00898 2A0119 cation transp 99.3 1.5E-11 3.2E-16 124.5 12.4 152 138-294 347-499 (505)
183 PRK10406 alpha-ketoglutarate t 99.3 1.4E-10 3E-15 114.8 18.6 162 127-289 256-423 (432)
184 KOG2504 Monocarboxylate transp 99.3 8.6E-11 1.9E-15 116.7 16.0 176 114-290 298-476 (509)
185 COG2270 Permeases of the major 99.3 4.1E-11 9E-16 111.6 12.3 176 116-292 254-431 (438)
186 PRK10054 putative transporter; 99.3 1.1E-10 2.4E-15 114.0 15.9 144 142-286 237-380 (395)
187 PF01306 LacY_symp: LacY proto 99.3 1.1E-10 2.3E-15 111.2 14.8 160 133-293 243-403 (412)
188 KOG4686 Predicted sugar transp 99.3 1.9E-10 4.2E-15 100.8 14.6 151 138-290 289-443 (459)
189 TIGR00894 2A0114euk Na(+)-depe 99.2 1.5E-10 3.2E-15 115.9 15.8 175 116-291 263-451 (465)
190 TIGR02332 HpaX 4-hydroxyphenyl 99.2 3.2E-10 7E-15 111.4 15.1 161 118-279 246-410 (412)
191 PRK10133 L-fucose transporter; 99.2 6.7E-10 1.4E-14 109.8 17.3 141 141-285 287-428 (438)
192 TIGR00896 CynX cyanate transpo 99.2 8.4E-10 1.8E-14 106.4 17.5 141 125-267 208-350 (355)
193 PRK11646 multidrug resistance 99.2 4.5E-10 9.7E-15 109.9 15.7 152 134-286 228-384 (400)
194 PF06813 Nodulin-like: Nodulin 99.2 1.2E-08 2.6E-13 91.1 22.3 165 125-292 13-184 (250)
195 PRK15034 nitrate/nitrite trans 99.2 7.9E-10 1.7E-14 107.8 16.0 173 118-291 256-455 (462)
196 TIGR00926 2A1704 Peptide:H+ sy 99.2 2.5E-08 5.4E-13 102.0 27.0 156 134-289 8-181 (654)
197 TIGR00710 efflux_Bcr_CflA drug 99.2 7.6E-10 1.7E-14 107.8 15.5 142 131-273 223-369 (385)
198 PF13347 MFS_2: MFS/sugar tran 99.1 1.3E-09 2.9E-14 107.7 16.5 153 116-268 227-387 (428)
199 PRK10473 multidrug efflux syst 99.1 2E-09 4.4E-14 105.2 17.2 138 136-279 225-363 (392)
200 PRK11195 lysophospholipid tran 99.1 3.4E-09 7.3E-14 103.5 18.2 148 139-289 231-379 (393)
201 PRK08633 2-acyl-glycerophospho 99.1 2.3E-09 4.9E-14 119.6 18.5 148 132-280 250-400 (1146)
202 TIGR00903 2A0129 major facilit 99.1 4.3E-09 9.4E-14 101.5 17.9 167 117-290 195-365 (368)
203 PRK11102 bicyclomycin/multidru 99.1 3.1E-09 6.7E-14 103.3 16.5 131 130-261 210-345 (377)
204 TIGR00769 AAA ADP/ATP carrier 99.1 6.3E-07 1.4E-11 87.7 32.1 274 114-402 7-333 (472)
205 PF07690 MFS_1: Major Facilita 99.1 5.4E-10 1.2E-14 107.4 10.8 136 121-256 213-352 (352)
206 PRK09848 glucuronide transport 99.1 9.3E-10 2E-14 109.6 12.7 151 118-268 232-391 (448)
207 PRK06814 acylglycerophosphoeth 99.1 2.5E-09 5.4E-14 119.0 16.9 162 120-281 231-413 (1140)
208 KOG0253 Synaptic vesicle trans 99.1 4.2E-10 9.1E-15 102.4 8.6 134 157-293 389-522 (528)
209 COG2807 CynX Cyanate permease 99.1 1.2E-08 2.7E-13 93.3 18.0 164 124-289 218-384 (395)
210 PRK10429 melibiose:sodium symp 99.1 9.8E-10 2.1E-14 110.0 12.0 153 116-268 233-396 (473)
211 TIGR00901 2A0125 AmpG-related 99.1 6.2E-10 1.3E-14 107.3 10.1 127 123-249 218-355 (356)
212 PRK14995 methyl viologen resis 99.1 2.3E-09 5E-14 108.0 14.6 144 122-265 267-413 (495)
213 KOG4332 Predicted sugar transp 99.1 1.7E-09 3.8E-14 94.1 11.1 320 123-474 46-383 (454)
214 TIGR00711 efflux_EmrB drug res 99.0 2.4E-09 5.2E-14 107.8 13.9 143 124-266 265-411 (485)
215 PRK11043 putative transporter; 99.0 2.1E-08 4.5E-13 98.4 19.0 140 132-272 221-364 (401)
216 KOG3098 Uncharacterized conser 99.0 6.5E-08 1.4E-12 93.4 21.4 301 151-475 51-392 (461)
217 PRK09669 putative symporter Ya 99.0 3E-09 6.5E-14 105.8 12.3 141 128-268 243-391 (444)
218 KOG3762 Predicted transporter 99.0 4.5E-09 9.9E-14 100.6 11.8 169 120-289 377-546 (618)
219 KOG0637 Sucrose transporter an 99.0 6.1E-08 1.3E-12 91.3 18.0 278 115-402 33-362 (498)
220 PF02487 CLN3: CLN3 protein; 98.9 7.5E-07 1.6E-11 84.7 24.7 305 152-475 62-375 (402)
221 TIGR00885 fucP L-fucose:H+ sym 98.9 4.8E-08 1E-12 95.8 16.5 155 123-281 241-403 (410)
222 TIGR00924 yjdL_sub1_fam amino 98.9 8.8E-08 1.9E-12 95.8 18.5 174 116-289 274-467 (475)
223 PF00083 Sugar_tr: Sugar (and 98.9 8.7E-12 1.9E-16 124.3 -10.5 180 114-295 253-442 (451)
224 KOG2532 Permease of the major 98.9 1.6E-08 3.4E-13 99.5 12.0 183 106-290 251-447 (466)
225 PRK11652 emrD multidrug resist 98.9 7.1E-08 1.5E-12 94.4 16.4 135 134-269 227-364 (394)
226 COG0738 FucP Fucose permease [ 98.8 9.1E-08 2E-12 89.1 15.0 166 114-283 236-402 (422)
227 TIGR00788 fbt folate/biopterin 98.8 2.2E-08 4.8E-13 99.8 11.3 138 141-278 280-431 (468)
228 PRK11462 putative transporter; 98.8 9.1E-08 2E-12 95.3 14.9 144 125-268 239-390 (460)
229 KOG3764 Vesicular amine transp 98.8 1.9E-08 4.2E-13 92.9 8.9 166 125-291 281-455 (464)
230 COG2211 MelB Na+/melibiose sym 98.8 4.6E-08 9.9E-13 94.4 11.9 154 114-267 236-398 (467)
231 TIGR00886 2A0108 nitrite extru 98.8 3.9E-08 8.5E-13 95.1 10.6 121 130-251 241-365 (366)
232 COG0477 ProP Permeases of the 98.8 4E-07 8.7E-12 85.2 17.3 160 123-282 11-177 (338)
233 KOG3574 Acetyl-CoA transporter 98.7 3E-06 6.5E-11 78.0 21.0 263 113-396 30-324 (510)
234 PF03209 PUCC: PUCC protein; 98.7 4.7E-07 1E-11 85.1 16.4 174 113-289 211-397 (403)
235 PRK15403 multidrug efflux syst 98.7 3.6E-07 7.9E-12 89.8 15.1 159 124-284 228-391 (413)
236 KOG0252 Inorganic phosphate tr 98.7 1.8E-08 3.8E-13 94.9 4.8 184 114-298 304-506 (538)
237 KOG3810 Micronutrient transpor 98.7 2.2E-07 4.8E-12 84.2 11.0 296 164-476 57-367 (433)
238 PRK09584 tppB putative tripept 98.6 1.1E-06 2.4E-11 88.5 16.9 136 151-286 318-475 (500)
239 KOG0254 Predicted transporter 98.6 1.7E-07 3.7E-12 94.8 10.0 183 112-295 293-489 (513)
240 TIGR01301 GPH_sucrose GPH fami 98.6 1.5E-06 3.3E-11 85.7 16.1 179 113-291 257-472 (477)
241 PRK10207 dipeptide/tripeptide 98.5 2.8E-06 6.2E-11 85.1 16.2 138 151-288 311-474 (489)
242 PF05978 UNC-93: Ion channel r 98.5 7.1E-06 1.5E-10 67.7 15.1 110 152-263 40-149 (156)
243 KOG2533 Permease of the major 98.5 3.8E-07 8.3E-12 90.0 8.2 162 116-277 275-443 (495)
244 PRK15462 dipeptide/tripeptide 98.4 3.9E-06 8.4E-11 83.2 12.0 68 335-402 8-76 (493)
245 PF12832 MFS_1_like: MFS_1 lik 98.3 3.4E-06 7.4E-11 60.5 7.9 70 119-188 5-74 (77)
246 PF03219 TLC: TLC ATP/ADP tran 98.3 0.001 2.2E-08 65.9 27.7 278 113-402 23-349 (491)
247 KOG2615 Permease of the major 98.3 1.4E-05 3.1E-10 73.9 12.7 142 123-265 270-414 (451)
248 PTZ00207 hypothetical protein; 98.3 9.6E-06 2.1E-10 81.9 12.9 171 117-290 356-552 (591)
249 PF06779 DUF1228: Protein of u 98.3 5.2E-06 1.1E-10 60.0 7.7 76 126-202 4-79 (85)
250 KOG0255 Synaptic vesicle trans 98.2 1.1E-05 2.4E-10 82.0 12.4 161 133-297 337-500 (521)
251 PF06609 TRI12: Fungal trichot 98.2 4.2E-05 9.1E-10 76.9 15.7 181 113-293 309-557 (599)
252 KOG3762 Predicted transporter 98.2 1.3E-05 2.8E-10 77.5 10.4 133 331-475 366-499 (618)
253 PF13000 Acatn: Acetyl-coenzym 98.2 0.0005 1.1E-08 66.4 20.6 278 118-402 4-339 (544)
254 COG3202 ATP/ADP translocase [E 98.1 0.0067 1.4E-07 58.7 27.9 278 112-402 25-352 (509)
255 KOG2816 Predicted transporter 98.1 0.00012 2.6E-09 72.0 15.5 124 139-264 267-391 (463)
256 TIGR00806 rfc RFC reduced fola 98.0 4.3E-05 9.4E-10 74.0 10.8 113 353-476 42-155 (511)
257 PF12832 MFS_1_like: MFS_1 lik 98.0 3.4E-05 7.4E-10 55.3 7.3 61 341-402 5-65 (77)
258 KOG1237 H+/oligopeptide sympor 97.9 0.0057 1.2E-07 62.1 23.6 158 131-288 55-243 (571)
259 PF00854 PTR2: POT family; In 97.8 0.00017 3.7E-09 69.9 11.2 111 180-290 2-123 (372)
260 PF02487 CLN3: CLN3 protein; 97.8 0.0007 1.5E-08 64.8 14.6 112 147-262 279-394 (402)
261 PRK03612 spermidine synthase; 97.6 0.0057 1.2E-07 61.6 19.2 156 125-281 25-188 (521)
262 COG3104 PTR2 Dipeptide/tripept 97.6 0.0024 5.2E-08 62.0 14.5 140 149-288 324-485 (498)
263 KOG2563 Permease of the major 97.5 0.00013 2.8E-09 69.4 5.4 175 118-292 270-452 (480)
264 TIGR00939 2a57 Equilibrative N 97.5 0.015 3.2E-07 57.3 19.8 97 157-258 53-156 (437)
265 KOG3880 Predicted small molecu 97.4 0.001 2.2E-08 59.9 9.6 136 151-292 64-201 (409)
266 KOG1479 Nucleoside transporter 97.4 0.018 3.8E-07 54.9 18.4 120 115-236 19-149 (406)
267 KOG3097 Predicted membrane pro 97.4 0.029 6.2E-07 51.4 18.5 100 159-260 68-178 (390)
268 PF07672 MFS_Mycoplasma: Mycop 97.4 0.004 8.6E-08 55.2 12.4 97 235-346 2-104 (267)
269 KOG2325 Predicted transporter/ 97.2 0.0012 2.5E-08 64.6 7.8 77 210-286 395-471 (488)
270 TIGR00805 oat sodium-independe 97.2 0.00067 1.5E-08 70.3 6.3 50 353-402 49-98 (633)
271 PF03092 BT1: BT1 family; Int 97.1 0.0024 5.2E-08 63.0 9.5 149 146-294 252-417 (433)
272 PF06963 FPN1: Ferroportin1 (F 97.1 0.0068 1.5E-07 59.1 12.0 128 133-260 277-413 (432)
273 KOG1330 Sugar transporter/spin 97.0 0.0024 5.2E-08 61.2 7.2 126 337-475 34-161 (493)
274 TIGR00880 2_A_01_02 Multidrug 96.9 0.0012 2.6E-08 53.5 4.0 88 378-475 4-91 (141)
275 PF06813 Nodulin-like: Nodulin 96.8 0.0067 1.5E-07 54.5 8.7 113 352-476 18-136 (250)
276 PF03137 OATP: Organic Anion T 96.8 0.00034 7.4E-09 70.6 0.0 153 113-265 304-514 (539)
277 KOG3098 Uncharacterized conser 96.7 0.062 1.3E-06 52.6 15.1 143 118-261 244-410 (461)
278 TIGR00939 2a57 Equilibrative N 96.6 0.02 4.3E-07 56.4 11.1 107 152-260 310-429 (437)
279 KOG4830 Predicted sugar transp 96.6 0.00095 2.1E-08 58.5 1.4 65 118-182 21-94 (412)
280 KOG3626 Organic anion transpor 96.5 0.0084 1.8E-07 61.5 8.0 152 114-265 392-649 (735)
281 PF05631 DUF791: Protein of un 96.0 0.27 5.9E-06 46.2 14.0 54 365-426 62-115 (354)
282 PF01770 Folate_carrier: Reduc 95.8 0.067 1.5E-06 51.5 9.6 121 130-251 263-388 (412)
283 PF06779 DUF1228: Protein of u 95.7 0.044 9.6E-07 39.8 6.2 51 349-400 5-55 (85)
284 KOG2601 Iron transporter [Inor 94.3 0.75 1.6E-05 43.3 11.4 166 116-281 29-217 (503)
285 PF01733 Nucleoside_tran: Nucl 94.0 0.019 4.1E-07 54.0 0.6 107 153-260 186-305 (309)
286 PF05978 UNC-93: Ion channel r 93.5 1.4 3.1E-05 36.4 10.7 89 376-475 41-129 (156)
287 PF13000 Acatn: Acetyl-coenzym 93.0 0.47 1E-05 46.6 8.2 65 205-269 407-471 (544)
288 KOG4332 Predicted sugar transp 92.5 2.1 4.5E-05 38.6 10.7 135 151-285 284-426 (454)
289 TIGR00769 AAA ADP/ATP carrier 92.4 13 0.00027 37.2 18.0 77 206-282 269-346 (472)
290 TIGR00926 2A1704 Peptide:H+ sy 92.2 0.71 1.5E-05 48.1 9.0 52 351-402 2-53 (654)
291 KOG3880 Predicted small molecu 91.9 0.95 2.1E-05 41.5 8.2 65 198-262 337-401 (409)
292 KOG0637 Sucrose transporter an 91.8 1.2 2.6E-05 43.3 9.1 129 152-281 335-487 (498)
293 KOG1479 Nucleoside transporter 91.4 0.4 8.6E-06 46.0 5.5 109 150-259 283-399 (406)
294 PF07672 MFS_Mycoplasma: Mycop 90.9 3.4 7.4E-05 37.1 10.5 101 152-252 144-255 (267)
295 COG4262 Predicted spermidine s 90.3 16 0.00035 34.4 19.4 164 124-289 17-190 (508)
296 COG0477 ProP Permeases of the 89.7 4.3 9.2E-05 37.1 11.2 51 351-402 17-69 (338)
297 PRK00293 dipZ thiol:disulfide 89.6 19 0.0004 37.1 16.2 31 369-399 322-352 (571)
298 PF07857 DUF1632: CEO family ( 87.8 15 0.00033 33.1 12.4 18 349-366 191-208 (254)
299 KOG3810 Micronutrient transpor 87.3 11 0.00024 35.5 11.4 132 152-287 274-418 (433)
300 PF01733 Nucleoside_tran: Nucl 84.4 0.33 7.1E-06 45.6 0.2 42 434-475 247-291 (309)
301 KOG3574 Acetyl-CoA transporter 82.1 3 6.4E-05 39.7 5.4 143 129-271 280-437 (510)
302 PRK03612 spermidine synthase; 81.7 64 0.0014 32.8 19.2 32 371-402 144-176 (521)
303 PF03219 TLC: TLC ATP/ADP tran 81.3 64 0.0014 32.5 19.0 78 206-283 285-363 (491)
304 PF06912 DUF1275: Protein of u 80.2 40 0.00086 29.4 17.0 40 238-278 161-200 (209)
305 PF02990 EMP70: Endomembrane p 78.9 16 0.00036 37.1 10.1 27 378-404 303-329 (521)
306 TIGR00927 2A1904 K+-dependent 77.2 22 0.00048 38.1 10.2 48 133-182 952-999 (1096)
307 COG5336 Uncharacterized protei 75.4 10 0.00023 28.5 5.4 35 157-191 50-85 (116)
308 KOG2765 Predicted membrane pro 75.4 26 0.00055 33.2 9.2 16 173-188 208-223 (416)
309 KOG0055 Multidrug/pheromone ex 75.1 1.5E+02 0.0032 33.4 19.3 39 246-287 789-827 (1228)
310 TIGR00844 c_cpa1 na(+)/h(+) an 74.1 1.3E+02 0.0028 32.2 22.0 31 249-279 111-141 (810)
311 KOG1237 H+/oligopeptide sympor 73.7 66 0.0014 33.2 12.7 63 203-265 458-520 (571)
312 KOG1307 K+-dependent Ca2+/Na+ 73.7 34 0.00073 33.4 9.7 41 137-179 447-487 (588)
313 PRK10263 DNA translocase FtsK; 71.9 29 0.00064 38.8 10.0 25 250-274 142-166 (1355)
314 PF05255 UPF0220: Uncharacteri 70.7 43 0.00093 28.0 8.7 134 232-391 15-154 (166)
315 KOG2881 Predicted membrane pro 70.3 82 0.0018 28.3 11.3 20 333-352 204-223 (294)
316 PF12805 FUSC-like: FUSC-like 66.2 41 0.00089 31.1 8.8 33 184-216 4-36 (284)
317 PF13386 DsbD_2: Cytochrome C 61.1 1.1E+02 0.0024 26.4 14.2 35 368-402 146-180 (199)
318 COG5336 Uncharacterized protei 57.2 45 0.00098 25.3 5.7 49 235-283 38-88 (116)
319 COG1230 CzcD Co/Zn/Cd efflux s 56.9 1.7E+02 0.0036 27.2 12.1 66 122-193 33-101 (296)
320 PF11947 DUF3464: Protein of u 54.8 51 0.0011 27.1 6.2 47 205-254 99-145 (153)
321 COG2962 RarD Predicted permeas 52.9 1.7E+02 0.0036 27.0 9.7 93 329-441 62-155 (293)
322 PF08566 Pam17: Mitochondrial 49.1 55 0.0012 27.4 5.6 15 100-114 24-38 (173)
323 PF02535 Zip: ZIP Zinc transpo 46.1 2.5E+02 0.0054 26.1 16.3 28 206-233 263-291 (317)
324 TIGR01666 YCCS hypothetical me 45.3 1.5E+02 0.0033 31.4 9.6 41 177-217 55-95 (704)
325 PF06638 Strabismus: Strabismu 45.3 2.4E+02 0.0051 28.2 10.1 11 202-212 180-190 (505)
326 TIGR01667 YCCS_YHJK integral m 45.1 1.5E+02 0.0032 31.6 9.5 42 177-218 55-96 (701)
327 PF02694 UPF0060: Uncharacteri 44.0 53 0.0011 24.9 4.4 49 148-196 53-101 (107)
328 PTZ00370 STEVOR; Provisional 42.4 35 0.00077 30.9 3.9 25 267-291 256-280 (296)
329 PF11299 DUF3100: Protein of u 40.9 51 0.0011 29.0 4.5 55 207-262 175-229 (241)
330 PF02554 CstA: Carbon starvati 40.7 3.4E+02 0.0074 26.1 14.0 35 230-269 48-83 (376)
331 PF12273 RCR: Chitin synthesis 40.6 14 0.0003 29.5 1.0 17 269-285 1-17 (130)
332 PF01914 MarC: MarC family int 40.5 2.5E+02 0.0054 24.4 12.2 55 229-283 28-83 (203)
333 PRK02237 hypothetical protein; 40.2 78 0.0017 24.1 4.8 48 149-196 56-103 (109)
334 COG2836 Uncharacterized conser 39.4 2.7E+02 0.0059 24.6 12.7 35 368-402 160-194 (232)
335 PRK10263 DNA translocase FtsK; 39.4 1.6E+02 0.0035 33.4 8.9 22 248-269 61-82 (1355)
336 PTZ00265 multidrug resistance 39.3 7.1E+02 0.015 29.4 16.8 20 266-285 195-214 (1466)
337 COG0701 Predicted permeases [G 37.0 3.6E+02 0.0079 25.4 10.1 47 353-399 210-257 (317)
338 TIGR03173 pbuX xanthine permea 36.3 4.2E+02 0.0091 25.9 12.2 101 137-238 15-116 (406)
339 PF09527 ATPase_gene1: Putativ 35.6 1.3E+02 0.0027 19.6 5.7 38 156-193 7-45 (55)
340 KOG2601 Iron transporter [Inor 35.2 2.5E+02 0.0054 27.3 8.2 68 336-403 27-94 (503)
341 TIGR02230 ATPase_gene1 F0F1-AT 33.8 1.8E+02 0.0039 21.9 5.9 29 164-192 57-86 (100)
342 TIGR03802 Asp_Ala_antiprt aspa 33.5 3.3E+02 0.0072 28.1 9.8 84 150-235 451-534 (562)
343 PF11947 DUF3464: Protein of u 33.1 2.8E+02 0.006 22.9 8.1 32 148-179 95-126 (153)
344 PF06826 Asp-Al_Ex: Predicted 31.8 3.1E+02 0.0067 23.0 10.2 82 150-233 57-138 (169)
345 COG1480 Predicted membrane-ass 31.7 6.3E+02 0.014 26.5 12.1 14 265-278 271-284 (700)
346 KOG2262 Sexual differentiation 30.5 1.3E+02 0.0028 31.2 5.9 12 208-219 188-199 (761)
347 COG3202 ATP/ADP translocase [E 30.3 5.9E+02 0.013 25.7 18.4 82 206-287 287-370 (509)
348 COG2233 UraA Xanthine/uracil p 30.1 2.5E+02 0.0055 27.8 7.8 53 140-192 40-92 (451)
349 PF03596 Cad: Cadmium resistan 29.8 3.6E+02 0.0079 23.2 9.7 30 256-285 43-72 (191)
350 COG2274 SunT ABC-type bacterio 28.7 7.5E+02 0.016 26.5 16.9 26 264-289 289-314 (709)
351 COG1268 BioY Uncharacterized c 28.6 2E+02 0.0044 24.5 6.1 23 156-178 89-111 (184)
352 PF13440 Polysacc_synt_3: Poly 27.7 4.2E+02 0.0091 23.2 21.8 33 355-388 201-233 (251)
353 COG0730 Predicted permeases [G 27.2 4.6E+02 0.01 23.6 12.5 23 380-402 211-233 (258)
354 PRK04972 putative transporter; 26.8 5E+02 0.011 26.8 9.8 92 150-243 446-537 (558)
355 PF02990 EMP70: Endomembrane p 26.7 2.3E+02 0.005 28.9 7.3 32 234-265 292-323 (521)
356 PF04226 Transgly_assoc: Trans 26.6 1.8E+02 0.0038 18.5 5.2 30 254-283 6-39 (48)
357 PRK03818 putative transporter; 25.8 5.3E+02 0.011 26.6 9.7 81 150-231 436-516 (552)
358 PF07760 DUF1616: Protein of u 25.7 5.4E+02 0.012 23.8 10.6 58 206-265 22-79 (287)
359 PRK15049 L-asparagine permease 25.5 7.1E+02 0.015 25.2 11.6 22 267-288 446-467 (499)
360 KOG1397 Ca2+/H+ antiporter VCX 25.4 2.3E+02 0.0049 27.3 6.2 41 114-154 290-330 (441)
361 KOG1277 Endosomal membrane pro 25.4 2.1E+02 0.0046 28.1 6.2 24 151-174 325-348 (593)
362 PRK02935 hypothetical protein; 25.2 2.6E+02 0.0056 21.2 5.3 18 173-190 6-23 (110)
363 PF04341 DUF485: Protein of un 25.2 2.8E+02 0.006 20.4 5.7 52 329-380 7-60 (91)
364 TIGR02230 ATPase_gene1 F0F1-AT 24.8 3.1E+02 0.0067 20.7 6.8 28 251-278 55-86 (100)
365 PF11368 DUF3169: Protein of u 24.4 5.2E+02 0.011 23.2 11.4 24 239-262 10-33 (248)
366 PF11833 DUF3353: Protein of u 23.9 4.7E+02 0.01 22.6 8.9 31 234-264 136-166 (194)
367 PF11151 DUF2929: Protein of u 23.8 2.3E+02 0.0049 18.8 5.6 42 250-291 13-54 (57)
368 cd02434 Nodulin-21_like_3 Nodu 23.5 4.5E+02 0.0098 23.3 7.7 18 385-402 180-197 (225)
369 PF11023 DUF2614: Protein of u 23.5 2E+02 0.0043 22.1 4.5 14 174-187 6-19 (114)
370 COG2095 MarC Multiple antibiot 23.3 5E+02 0.011 22.6 12.5 61 225-285 27-88 (203)
371 PF07857 DUF1632: CEO family ( 23.0 4.4E+02 0.0095 23.9 7.5 12 145-156 214-225 (254)
372 TIGR03644 marine_trans_1 proba 23.0 7.3E+02 0.016 24.4 12.2 47 212-259 298-344 (404)
373 PF02632 BioY: BioY family; I 22.9 3E+02 0.0064 22.5 6.0 24 157-180 61-84 (148)
374 COG1280 RhtB Putative threonin 22.8 5.1E+02 0.011 22.5 15.8 12 333-344 122-133 (208)
375 PF03741 TerC: Integral membra 22.6 4.9E+02 0.011 22.2 16.0 58 219-278 12-69 (183)
376 COG3619 Predicted membrane pro 22.0 5.7E+02 0.012 22.7 19.0 31 148-178 54-84 (226)
377 KOG4830 Predicted sugar transp 21.9 1.4E+02 0.003 27.2 4.0 118 119-236 206-326 (412)
378 COG4262 Predicted spermidine s 21.8 7.3E+02 0.016 24.0 10.6 39 357-398 31-69 (508)
379 KOG1277 Endosomal membrane pro 21.7 72 0.0016 31.2 2.4 23 382-404 337-359 (593)
380 PF06800 Sugar_transport: Suga 21.5 6.3E+02 0.014 23.1 15.3 20 378-397 168-187 (269)
381 PRK11588 hypothetical protein; 20.4 9.1E+02 0.02 24.5 19.1 15 265-279 228-242 (506)
382 COG3559 TnrB3 Putative exporte 20.2 8.5E+02 0.018 24.1 14.4 59 336-394 298-366 (536)
No 1
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.3e-35 Score=268.79 Aligned_cols=356 Identities=16% Similarity=0.175 Sum_probs=281.7
Q ss_pred hHHHHHHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHH
Q 011781 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (477)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 191 (477)
+++++..+++++...++.+-.++...|.+.++.++|.+|+|++.+.+.+++.++..+.|.++||.++|..+..++++.++
T Consensus 27 r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai 106 (448)
T COG2271 27 RIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAI 106 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHH
Confidence 46688888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhh--HHhhcccChh
Q 011781 192 ATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLA--PPIIENLGWE 269 (477)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~--~~l~~~~g~~ 269 (477)
..++++ ++++.+.+.++.++.|+..|..+|++...+.+|+++++||+..++++++.++|+.+.|++. +++..+.+||
T Consensus 107 ~nil~G-fs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~ 185 (448)
T COG2271 107 VNILFG-FSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWR 185 (448)
T ss_pred HHHHHh-hhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchh
Confidence 999997 5668899999999999999999999999999999999999999999999999999999999 8998889999
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhc--cCCCCCCHHHHhhcHHHHHHHHHHHH
Q 011781 270 SVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMG--ESLKDVPWKAIFRSKAVWAMIYAHFC 347 (477)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~ 347 (477)
..|++.++++++..++.++..+++++...-++.++-..+..+.. ..++.+ ....+.-++.+++||.+|.+++..++
T Consensus 186 ~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~~d~~e~~--~~~~~~~~ls~~~i~~~YVL~Nk~iW~la~a~vf 263 (448)
T COG2271 186 AAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYRGDPLEIY--EEEKENEGLTAWQIFVKYVLKNKLIWLLALANVF 263 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCccccCCCCHHHhhcCchhhh--hhhccCCCccHHHHHHHHHHcChHHHHHHHHHHH
Confidence 99999999998887777776665554433222111110000000 000000 01111235678899999999999999
Q ss_pred hHHHHHHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhhhHHHHhh
Q 011781 348 GSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTL 427 (477)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~~~~l 427 (477)
.+.+-+++..|.|.|+.|..|++...+++..+.+-.++++|.+++||++||+.+.+ |....++..+...+++..
T Consensus 264 vYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgr------R~p~~~i~~~~i~~~~~~ 337 (448)
T COG2271 264 VYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGR------RGPMALIFMLLITASLVL 337 (448)
T ss_pred HHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccc------cchHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999997541 344444444444444444
Q ss_pred hcccCCCc-hHHHHHHHHHHHHhhhhhhhhhhHhhhccCccchhhhhhhc
Q 011781 428 SSIDLGLP-HWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLYLE 476 (477)
Q Consensus 428 ~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~g~~~gl~ 476 (477)
........ ....+.++++|+...+-.........+-.+++..|++.|+.
T Consensus 338 ~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~ 387 (448)
T COG2271 338 YWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFV 387 (448)
T ss_pred HHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchh
Confidence 44433332 34455666677776655533333333334445599998863
No 2
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6e-32 Score=251.92 Aligned_cols=329 Identities=20% Similarity=0.269 Sum_probs=263.7
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHH
Q 011781 113 YKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLA 192 (477)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 192 (477)
+..+..+.++.|............+|++.+++|+|..+.|++.++|.++..++.++...+.||+.||++++..+.++.++
T Consensus 12 ~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~ 91 (394)
T COG2814 12 WLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVS 91 (394)
T ss_pred hHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHH
Confidence 45667778888888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHH
Q 011781 193 TALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVF 272 (477)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~ 272 (477)
.+++ .++++++.+++.|++.|+..|.+++...++..++.|+++|++++++...+..++.++|.+++.++.+.+|||+.|
T Consensus 92 n~l~-alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F 170 (394)
T COG2814 92 NLLS-ALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATF 170 (394)
T ss_pred HHHH-HHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHH
Confidence 9888 588899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHHHHHHhHHHH
Q 011781 273 YIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGH 352 (477)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 352 (477)
++.++++++..+..+...+ +++..+..... ..+..+++|+|.++...+..++...+.
T Consensus 171 ~~ia~l~ll~~~~~~~~lP-~~~~~~~~~~~----------------------~~~~~~~l~~p~v~~~l~~t~l~~~g~ 227 (394)
T COG2814 171 LAIAVLALLALLLLWKLLP-PSEISGSLPGP----------------------LRTLLRLLRRPGVLLGLLATFLFMTGH 227 (394)
T ss_pred HHHHHHHHHHHHHHHHhCC-CccCCCCCCcc----------------------hhHHHHHhcCchHHHHHHHHHHHHcch
Confidence 9999998887665544433 11111111010 001258899999999999999999999
Q ss_pred HHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhhhHHHHhhhcccC
Q 011781 353 YTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDL 432 (477)
Q Consensus 353 ~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~~~~l~~~~~ 432 (477)
+...+|+.+++++..|++....++++..++++.++|..++|++.|| +.+ +.+.....+.....+.+... .
T Consensus 228 F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~--------~~l~~~~~l~a~~~l~l~~~-~ 297 (394)
T COG2814 228 FALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPR--------RALIAALLLLALALLALTFT-G 297 (394)
T ss_pred hhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cch--------hHHHHHHHHHHHHHHHHHHh-c
Confidence 9999999999999999999999999999999999999999999999 544 44444433433333333333 2
Q ss_pred CCchHHHHHHHHHHHHhhhhhhhhhhHhhhccCccchhhhhhhc
Q 011781 433 GLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLYLE 476 (477)
Q Consensus 433 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~g~~~gl~ 476 (477)
.+........++.|+... ...........+..||.++.+.+++
T Consensus 298 ~~~~~~~~~~~~wg~a~~-~~~~~~~~~~a~~~p~~~~~a~sl~ 340 (394)
T COG2814 298 ASPALALALLFLWGFAFS-PALQGLQTRLARLAPDAADLAGSLN 340 (394)
T ss_pred chHHHHHHHHHHHHHHhh-hhhhHHHHHhcccCCCchHHHHHHH
Confidence 333333333333333332 2223333333445578888877764
No 3
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=100.00 E-value=2.9e-31 Score=266.26 Aligned_cols=353 Identities=17% Similarity=0.121 Sum_probs=267.4
Q ss_pred hhHHHHHHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHH
Q 011781 111 QRYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWS 190 (477)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 190 (477)
++|..+..+++..++..++.++++..+|.+.+++|.+..+.+|+.+.+.+++.++.+++|+++||+|||+++..+.+++.
T Consensus 3 ~~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~ 82 (495)
T PRK14995 3 RQWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFG 82 (495)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 35677888899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhc-CCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChh
Q 011781 191 LATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSI-PLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWE 269 (477)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~ 269 (477)
++.++++ .+++++.++++|+++|++.+...+.....+.+.+ |+++|++++|++.....+|..+||.+++++.++.|||
T Consensus 83 ~~~~~~~-~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr 161 (495)
T PRK14995 83 LASLAAA-FSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWG 161 (495)
T ss_pred HHHHHHH-HcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChH
Confidence 9988875 6788899999999999999998888888887776 6789999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH-hccCCcCCCCCCCCcchhhh-----------hh---hhh-hh-----------------h
Q 011781 270 SVFYIFGLLGIAWFSGFKI-LQEGETSNGATLAPRSNYIN-----------MK---KSL-SA-----------------S 316 (477)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-----------~~---~~~-~~-----------------~ 316 (477)
|.|++...+.++.+++..+ +++++. ++.++.+...... .. +.. .. .
T Consensus 162 ~~f~i~~~~~~~~~~l~~~~l~~~~~-~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~ 240 (495)
T PRK14995 162 SVFLINVPIVLVVMGLTARYVPRQAG-RRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFI 240 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCC-CCCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHH
Confidence 9999988777665554444 343322 1111111111000 00 000 00 0
Q ss_pred HHhhccCCCCCCHHHHhhcHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhch
Q 011781 317 LEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFA 396 (477)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~ 396 (477)
..+.+.+....+ .+++|+|.++...+..++......+...++|.|+++.+|+++.++|.......++..++.++.|++.
T Consensus 241 ~~e~~~~~p~~~-~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~ 319 (495)
T PRK14995 241 RTQLAASRPMID-MRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILV 319 (495)
T ss_pred HHHhcCCCCCcC-HHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 011111111122 4678899988888888888888888888999999999999999999999999999999999999999
Q ss_pred hHHHhcCcccceehhhhhHHhhhhhHHHHh-hhcccCCCch-HHHHHHHHHHHHhhhhhhhhhhHhhhccCccchhhhhh
Q 011781 397 DNLIATGVETTMVRKICQTIAFLSPAVCMT-LSSIDLGLPH-WEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLY 474 (477)
Q Consensus 397 dr~g~~~~~~~~~r~~~~~~~~~~~~~~~~-l~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~g~~~g 474 (477)
||+|+| +.. ..+.+..++... +......... ......++.|.+.+....+.........+++++|.+.|
T Consensus 320 ~r~g~~--------~~~-~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~ 390 (495)
T PRK14995 320 SRLGLR--------LVA-TGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGA 390 (495)
T ss_pred HHcCch--------HHH-HHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHH
Confidence 999866 332 233333332222 2122222223 34445666777777666666666777778888998877
Q ss_pred h
Q 011781 475 L 475 (477)
Q Consensus 475 l 475 (477)
+
T Consensus 391 ~ 391 (495)
T PRK14995 391 I 391 (495)
T ss_pred H
Confidence 5
No 4
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=1.2e-32 Score=274.70 Aligned_cols=353 Identities=10% Similarity=0.050 Sum_probs=251.8
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHH
Q 011781 113 YKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLA 192 (477)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 192 (477)
++.+..+++.+++.+.+...++...|.+.+++|++..+.|++.+.+.+++.+++++.|+++||+|+|+++..+.++.+++
T Consensus 28 ~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~ 107 (467)
T PRK09556 28 MQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAIC 107 (467)
T ss_pred HHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHH
Confidence 45666777788888889999999999999999999999999999999999999999999999999999998888877776
Q ss_pred HHHHHHh----hchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhccc--
Q 011781 193 TALLPLL----AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL-- 266 (477)
Q Consensus 193 ~~~~~~~----~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~-- 266 (477)
.++++.. +++++.+++.|++.|++.+...|...+++.+++|+++||+++|+...+..+|.++++.+..++.+..
T Consensus 108 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~ 187 (467)
T PRK09556 108 MLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFD 187 (467)
T ss_pred HHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhcc
Confidence 6655432 5778899999999999999999999999999999999999999999999999999999988776653
Q ss_pred -ChhHHHHHHHHHHHHHHHHHHHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhh-ccCCCC-CC-HHHHhhcHHHHHHH
Q 011781 267 -GWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEM-GESLKD-VP-WKAIFRSKAVWAMI 342 (477)
Q Consensus 267 -g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~-~~~~~~~~~~~~~~ 342 (477)
+|+..|.+.+++.++..++.+++.++++++....+.++ ... +......+.. +++... .. .+..+++|.+|...
T Consensus 188 ~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 264 (467)
T PRK09556 188 GHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWGKAEE-IFG--EPISEEDKETESTDMTKWQIFVEYVLKNPVIWLLC 264 (467)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCCChhh-ccc--CccchhhhccccccCcHHHHHHHHHHcChHHHHHH
Confidence 69999988888777665555554333322211111100 000 0000000000 000000 00 12378999999999
Q ss_pred HHHHHhHHHHHHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhhhH
Q 011781 343 YAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPA 422 (477)
Q Consensus 343 l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~ 422 (477)
+..++......+...|+|.|+++.+|++..++++......++.+++.+++|+++||+++| +...........
T Consensus 265 ~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r--------~~~~~~~~~~~~ 336 (467)
T PRK09556 265 FANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGR--------RALVACIALALI 336 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--------chHHHHHHHHHH
Confidence 988888888888899999999988999999999999999999999999999999999877 222221111111
Q ss_pred HHHhhhcccCCCchHHHHHHHHHHHHhhhhhhhhhhHhhhccCccchhhhhhhc
Q 011781 423 VCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLYLE 476 (477)
Q Consensus 423 ~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~g~~~gl~ 476 (477)
...++......+.....+..+++|.+..+.............+++++|++.|+.
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~ 390 (467)
T PRK09556 337 IFTLGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIK 390 (467)
T ss_pred HHHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHH
Confidence 111111111222223334455555443333222223334556667799999864
No 5
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.3e-31 Score=260.55 Aligned_cols=331 Identities=36% Similarity=0.628 Sum_probs=284.0
Q ss_pred hhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhch-HHHHHHHHHHHHhhccch
Q 011781 142 HRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGF-MPGLVLSRVLVGIGEGVS 220 (477)
Q Consensus 142 ~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~g~~~~~~ 220 (477)
.+++++..+-+++.+.+..|+++++++.|+++||+|.|+++..+.++.+++.++.+...+. ++.+++.|+++|++.+..
T Consensus 66 ~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~ 145 (466)
T KOG2532|consen 66 GEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVL 145 (466)
T ss_pred ceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHH
Confidence 4688899999999999999999999999999999999999999999999999888765532 357799999999999999
Q ss_pred hhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcc-cChhHHHHHHHHHHHHHHHHHHHhccCCcCCCCC
Q 011781 221 PSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN-LGWESVFYIFGLLGIAWFSGFKILQEGETSNGAT 299 (477)
Q Consensus 221 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (477)
+|+...+.++|.|++||++..++..++..+|.+++-+++|++.+. +||+++|++.++++++..++++++..+.+.+.+.
T Consensus 146 ~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h~~ 225 (466)
T KOG2532|consen 146 FPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSKHPN 225 (466)
T ss_pred HhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCcccCCC
Confidence 999999999999999999999999999999999999999999998 9999999999999999988888877666555433
Q ss_pred CCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHhhCCchhhhHHHHH
Q 011781 300 LAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSI 379 (477)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~ 379 (477)
..++|... .+++. .++..++..+.||+++++++.+|...+..+...++...+..|+|.|+.+.+|++..+.|++.+
T Consensus 226 is~~El~~-I~~~k---~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~sa 301 (466)
T KOG2532|consen 226 ISEKELKY-IEKGK---SEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSA 301 (466)
T ss_pred CCHHHHHH-HHhcc---cccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHH
Confidence 32222111 11110 011111115779999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhhhHHHHhhhcccCCCchHHHHHHHHHHHHhhhhhhhhhhH
Q 011781 380 LPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYC 459 (477)
Q Consensus 380 ~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 459 (477)
+..+.+.+..+++|.++||+-.|..+.+..||....+++...+++++.+.+......+..+.++.++.++.++..+....
T Consensus 302 lP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~ 381 (466)
T KOG2532|consen 302 LPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYK 381 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHh
Confidence 99999999999999999999887777888899999999999988888777655445566677777888888888888888
Q ss_pred hhhccCccchhhhhhhc
Q 011781 460 THQDISPEYASILLYLE 476 (477)
Q Consensus 460 ~~~~~~p~~~g~~~gl~ 476 (477)
..++..|++.+.++|++
T Consensus 382 ~~~~~apq~a~~l~g~~ 398 (466)
T KOG2532|consen 382 NHQDIAPQHAGFVMGII 398 (466)
T ss_pred hhhhccchHHHHHHHHH
Confidence 88888999999999864
No 6
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=100.00 E-value=3.4e-31 Score=264.55 Aligned_cols=362 Identities=27% Similarity=0.410 Sum_probs=267.1
Q ss_pred CchhHHHHHHHHHHHHHHHhhhhHHHHhHHhhhh----------------------hhCCCcchhhHHHHHHHHHHHHhh
Q 011781 109 IPQRYKLIGTTSLAFVICNMDKVNLSVAIIPMSH----------------------RFGWNSSVAGLVQSSFFWGYALSQ 166 (477)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~g~s~~~~g~~~~~~~~~~~~~~ 166 (477)
.+.++.+..+++++..+.+.+....+...+.+.+ +++++..+.|++.+.+.+++.+++
T Consensus 14 ~~~r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~ 93 (465)
T TIGR00894 14 CSFRLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGALQGLILSSHFYGQIIIQ 93 (465)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHHhhHHHHHHHHHHHHHH
Confidence 4446677778888888889999999988887766 789999999999999999999999
Q ss_pred hhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHh-hchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHH
Q 011781 167 LPGGWLAKIFGGRKVLQTGVLIWSLATALLPLL-AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVF 245 (477)
Q Consensus 167 ~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~ 245 (477)
++.|+++||+|+|+++..+.++.+++.+++... ..+++.+++.|+++|++.+...+....++.+++|+++|++++++..
T Consensus 94 ~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 173 (465)
T TIGR00894 94 IPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGMST 173 (465)
T ss_pred cchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHHHH
Confidence 999999999999999999988888877665422 3446778999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHhhhHHhhcc-cChhHHHHHHHHHHHHHHHHHHHhccCCcCCCCCCCCcchhhhhhhhhhhhHHh-hccC
Q 011781 246 GGLSFGSVAGLLLAPPIIEN-LGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEE-MGES 323 (477)
Q Consensus 246 ~~~~~g~~ig~~~~~~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 323 (477)
.+..+|.+++|++++.+.+. .|||+.|++.+++.++..++++.+++++++..+...++++ +...+..++ .++.
T Consensus 174 ~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~-----~~i~~~~~~~~~~~ 248 (465)
T TIGR00894 174 SGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHPCISKFEK-----KYINSSLQGQKGST 248 (465)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccCCCCCHHHH-----HHHHhhcccccCCC
Confidence 99999999999999999988 4999999999998877776666655443322211111110 000000010 1111
Q ss_pred CCCCCHHHHhhcHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcC
Q 011781 324 LKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATG 403 (477)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~ 403 (477)
..+.+++++++++.+|...+..++.....+.+.+|+|.|+.+.+|++..+.++..+...++.+++.++.|+++||+++|+
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~ 328 (465)
T TIGR00894 249 RQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSK 328 (465)
T ss_pred CCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 22346889999999999999999999999999999999999989999999999999999999999999999999998764
Q ss_pred ccccee-hhhhhHHhhhhhHHHHhhhcccCCCchHHHHHHHHHHHHhhhhhhhhhhHhhhccCccchhhhhhhc
Q 011781 404 VETTMV-RKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLYLE 476 (477)
Q Consensus 404 ~~~~~~-r~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~g~~~gl~ 476 (477)
...+.. ++....++....++..+...... ...+..+.++.++.+..+...+.......+..|+..|.++|+.
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 401 (465)
T TIGR00894 329 TLSLTAARKIFNGIGGLGPGIFAYALPYLS-AAFYLTIIILTLANAVSSGPLAGVLINSLDLAPRFLGFIKGIT 401 (465)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHcC-CchHHHHHHHHHHHHHhhhhhhhhhhchhhcChhHHHHHHHHH
Confidence 322111 11222222111111121111111 2233333333444443444444555566677788888888763
No 7
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=7.1e-31 Score=257.38 Aligned_cols=287 Identities=19% Similarity=0.270 Sum_probs=227.2
Q ss_pred hHHHHHHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHH
Q 011781 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (477)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 191 (477)
+|+.+..+++.+++.+.+....+...|.+.+++|++..++|++.+++.+++.+++++.|++.||+|||+++..+.+++++
T Consensus 6 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~ 85 (412)
T TIGR02332 6 FRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGI 85 (412)
T ss_pred hhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHH
Confidence 56788888888889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhc------c
Q 011781 192 ATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE------N 265 (477)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~------~ 265 (477)
+.++.+ ++++++.+++.|++.|++.+...+....++.+++|+++|++++++++....+|.++++++++++.+ .
T Consensus 86 ~~~~~~-~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~ 164 (412)
T TIGR02332 86 ASTATM-FATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMAL 164 (412)
T ss_pred HHHHHH-HhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCc
Confidence 888875 677789999999999999999999999999999999999999999999999999999999998864 3
Q ss_pred cChhHHHHHHHHHHHHHHHHHH-HhccCCcCCCCCCCCcchhhhhhhhhh-h--hHHhhcc--CCCC----CCHHHHhhc
Q 011781 266 LGWESVFYIFGLLGIAWFSGFK-ILQEGETSNGATLAPRSNYINMKKSLS-A--SLEEMGE--SLKD----VPWKAIFRS 335 (477)
Q Consensus 266 ~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~--~~~~----~~~~~~~~~ 335 (477)
.|||+.|++.++..++..++.+ +++|++.+.+ ...++++. ...+... + ..++.++ +... ..++.+ ++
T Consensus 165 ~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~-~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 241 (412)
T TIGR02332 165 KGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAK-WLDEEDKK-ALKEMIDNDQLTLEQPEGAFAHAAMPQRSMLREI-FT 241 (412)
T ss_pred cchhHHHHHHHHHHHHHHHHHhhccCCCcccCC-CCCHHHHH-HHHHHHHhccccccccccccccccccHHHHHHHh-cC
Confidence 6999999998888776554443 4444433211 11111110 0000000 0 0000000 0000 123333 35
Q ss_pred HHHHHHHHHHHHhHHHHHHHhhhhhHHHHHh-hCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhc
Q 011781 336 KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEE-LSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIAT 402 (477)
Q Consensus 336 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~ 402 (477)
|.+|...+..++.....+.+.+|+|.|+++. .|++..+++.+.....++.+++.++.|+++||+++|
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r 309 (412)
T TIGR02332 242 PAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKER 309 (412)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCcc
Confidence 7888888888888888889999999999772 367888889999999999999999999999999866
No 8
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=1.3e-30 Score=254.39 Aligned_cols=326 Identities=18% Similarity=0.194 Sum_probs=243.1
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHH
Q 011781 113 YKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLA 192 (477)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 192 (477)
|..+..+.++.+..........+..|.+.+++|.|..++|++.+.+.+++.+++++.|++.||+|||+++..+.++.+++
T Consensus 8 ~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 87 (390)
T PRK03545 8 WLRVVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIAS 87 (390)
T ss_pred hHHHHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHH
Confidence 33344444444444444445556689999999999999999999999999999999999999999999999999998888
Q ss_pred HHHHHHhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHH
Q 011781 193 TALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVF 272 (477)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~ 272 (477)
.+.+. ..++++.+++.|++.|++.+...+...+++.+++|+++|++++|+...+..+|.+++|++++.+.+..|||+.|
T Consensus 88 ~~~~~-~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f 166 (390)
T PRK03545 88 HVLSA-LAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTF 166 (390)
T ss_pred HHHHH-HhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHH
Confidence 87774 67788999999999999999888999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHHHHHHhHHHH
Q 011781 273 YIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGH 352 (477)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 352 (477)
++.+++.++..+..+...+++++++ +.. ..++++.+|+|.++...+..++.....
T Consensus 167 ~~~~~~~~l~~~~~~~~~~~~~~~~---~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (390)
T PRK03545 167 LAIGGGALITLLLLIKLLPLLPSEH---SGS----------------------LKSLPLLFRRPALVSLYLLTVVVVTAH 221 (390)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCCC---cch----------------------HHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 9998887766554443322211110 000 011357788888887766666666666
Q ss_pred HHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhhhHHHHhhhcccC
Q 011781 353 YTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDL 432 (477)
Q Consensus 353 ~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~~~~l~~~~~ 432 (477)
.....+++.|+.+..|.+...++.+.....++.++++++.+++.||++++ .. .....+.......+... .
T Consensus 222 ~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~--------~~-~~~~~~~~~~~~~l~~~-~ 291 (390)
T PRK03545 222 FTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSG--------FL-LIAIALLLVCLLLLLPA-A 291 (390)
T ss_pred HHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchh--------HH-HHHHHHHHHHHHHHHHH-h
Confidence 66677888888887899999999999999999999999999999998754 22 22222222222222222 2
Q ss_pred CCchHHHHHHHHHHHHhhhhhhhhhhHhhhccCccchhhhhhh
Q 011781 433 GLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLYL 475 (477)
Q Consensus 433 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~g~~~gl 475 (477)
++.....+..++.|.+..... +.......+..|+++|+++|+
T Consensus 292 ~~~~~~~~~~~l~g~~~~~~~-~~~~~~~~~~~~~~~~~~~g~ 333 (390)
T PRK03545 292 NSEWHLSVLSIFWGIAIMCIG-LAMQVKVLKLAPDATDVAMAL 333 (390)
T ss_pred chHHHHHHHHHHHHHHHhcch-HHHHHHHHHhCCCcHHHHHHH
Confidence 233334445555666544433 334455556677888988875
No 9
>TIGR00893 2A0114 d-galactonate transporter.
Probab=100.00 E-value=6.6e-31 Score=257.01 Aligned_cols=347 Identities=24% Similarity=0.396 Sum_probs=253.0
Q ss_pred HHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhchH
Q 011781 124 VICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFM 203 (477)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~ 203 (477)
+....+...++...|.+.+++|.+..+.+++.+++.++..++.++.|+++||+|||+++..+.++.+++.+++. ..+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~-~~~~~ 82 (399)
T TIGR00893 4 VINYLDRANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQA-FAGAY 82 (399)
T ss_pred hHHHHHHHhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHH-HHcCH
Confidence 45567778888899999999999999999999999999999999999999999999999999988888887775 56678
Q ss_pred HHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHHHHHHHHHHHH
Q 011781 204 PGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWF 283 (477)
Q Consensus 204 ~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~~~~~~~~~~ 283 (477)
+.+++.|++.|++.+...+....++.|++|+++|++++++.+....+|.+++|.+++.+.+..+||+.|++.+++.++..
T Consensus 83 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 162 (399)
T TIGR00893 83 VSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWG 162 (399)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999888877766
Q ss_pred HHHHHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHHHHHHhHHHHHHHhhhhhHHH
Q 011781 284 SGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYF 363 (477)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 363 (477)
+...+..++++++++...++++....+....+..++.+++.....+++.+++|.++...+..++.......+..+.|.|+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (399)
T TIGR00893 163 VLWLKFIPDPPQKAKWLTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLTWFPTYL 242 (399)
T ss_pred HHhhheecCCCCccccCCHHHHhhcchhhccccccccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 55544433322221111111111000000000001111222334567889999999999999998889999999999999
Q ss_pred HHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhhh--HHHHhhhcccCCCchHHHHH
Q 011781 364 SEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSP--AVCMTLSSIDLGLPHWEIVG 441 (477)
Q Consensus 364 ~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~ 441 (477)
++.+|.+..+.+++.+...++.+++.++.+++.||+++|+.. ........... ...+...........+..+.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (399)
T TIGR00893 243 VQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKS-----LVFARKTAIIAGLVLSLLMFATNYVNIPYAALA 317 (399)
T ss_pred HHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccc-----hhHHHHHHHHHHHHHHHHHHHhccchhHHHHHH
Confidence 988999999999999999999999999999999999988311 11100111111 11111111111223344444
Q ss_pred HHHHHHHhhhhhhhhhhHhhhccCccchhhhhhhc
Q 011781 442 ILTAGLALSSFALSGLYCTHQDISPEYASILLYLE 476 (477)
Q Consensus 442 ~~~~g~~~~~~~~~~~~~~~~~~~p~~~g~~~gl~ 476 (477)
...++.+..+..........+..+++++|+++|+.
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 352 (399)
T TIGR00893 318 LVALGFFGLGAGAIGWALISDNAPGNIAGLTGGLI 352 (399)
T ss_pred HHHHHHhchhhhhHHHHHHHhhcChhHHHHHHHHH
Confidence 44445444443433333444445667799998863
No 10
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=1.5e-30 Score=257.18 Aligned_cols=286 Identities=17% Similarity=0.191 Sum_probs=224.8
Q ss_pred hHHHHHHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHH
Q 011781 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (477)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 191 (477)
++..+...++..+...++...++..+|.+.+++|+|..+.|++.+.+.+++.+++++.|++.||+|||+++.++.++.++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~ 100 (434)
T PRK11663 21 RRHILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGI 100 (434)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHH
Confidence 34566666777777778888889999999999999999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHH
Q 011781 192 ATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESV 271 (477)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~ 271 (477)
+.++++ ..++++.+++.|++.|++.+...+...+++.+++|+++|++++++.+.+..+|.+++|.+++++.+.+|||+.
T Consensus 101 ~~~~~~-~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~ 179 (434)
T PRK11663 101 INILFG-FSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYG 179 (434)
T ss_pred HHHHHH-HHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHH
Confidence 887774 5677788999999999999988999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH-HHHHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCC-H-HHHhhcHHHHHHHHHHHHh
Q 011781 272 FYIFGLLGIAWFS-GFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVP-W-KAIFRSKAVWAMIYAHFCG 348 (477)
Q Consensus 272 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~l~~~~~ 348 (477)
|++.+++.++..+ ..+++++++.........+.+... .+. ..+..+....... + ...++++.+|.+.+..++.
T Consensus 180 f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (434)
T PRK11663 180 MMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRHDA-LEL---AQQQEGAGLSRKEILTKYVLLNPYIWLLSFSYVLV 255 (434)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccccccc-ccc---chhccccCCChhhhHHHHHhcChHHHHHHHHHHHH
Confidence 9998887665443 333445433221101000000000 000 0000000000011 1 2356789999888887777
Q ss_pred HHHHHHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhc
Q 011781 349 SWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIAT 402 (477)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~ 402 (477)
...+..+.+|+|.|+.+.+|++..+++...+...++.++++++.|++.||+.++
T Consensus 256 ~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~ 309 (434)
T PRK11663 256 YVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNG 309 (434)
T ss_pred HHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccC
Confidence 777888889999999877899999999999999999999999999999999543
No 11
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.98 E-value=6.7e-31 Score=252.94 Aligned_cols=334 Identities=27% Similarity=0.421 Sum_probs=248.4
Q ss_pred HHHHHHHHhhhhHHHHhHH-hhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHH
Q 011781 120 SLAFVICNMDKVNLSVAII-PMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPL 198 (477)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~-~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 198 (477)
+++.++.......+.+..| .+.+++|.+..+++++.+++.++..+++++.|+++||+|||+++..+.++.+++.++..
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~- 80 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLA- 80 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHH-
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhh-
Confidence 4566777788888999999 89999999999999999999999999999999999999999999999999888855553
Q ss_pred hhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHHHHHHH
Q 011781 199 LAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLL 278 (477)
Q Consensus 199 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~~~~~ 278 (477)
++++.+.+++.|++.|++.+...+...+++.+++|+++|++++++.+....+|.+++|.+++.+.+..+||+.|++.+++
T Consensus 81 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~ 160 (352)
T PF07690_consen 81 FASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAIL 160 (352)
T ss_dssp HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHH
T ss_pred hhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccch
Confidence 44556799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH-HHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHHHHHHhHHHHHHHhh
Q 011781 279 GIAWFSGF-KILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLS 357 (477)
Q Consensus 279 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 357 (477)
.++..++. .+++++++++..+.+.+++. .. +++. ...++.++++|.+|...+..++..+.......
T Consensus 161 ~~~~~il~~~~~~~~~~~~~~~~~~~~~~-~~-----------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (352)
T PF07690_consen 161 SLIAAILFILFLPEPPPPRERESPKESES-KK-----------PKPL-KPGFKSLFKNPVLWILLIAFFLFFFVFSGFSF 227 (352)
T ss_dssp HHHHHHHHHCCC---STTTT--SSTTTT---H-----------HHCC-CH-CTHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhHhhhhhhccccccccccccccc-cc-----------cccc-ccccccccccchhhhhhhhhhHHHHHHHHhhc
Confidence 88876643 33333333322222111100 00 0000 00246777788777566666666667788999
Q ss_pred hhhHHHHHhhCCc-hhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhhhHHHHhhhccc-CCCc
Q 011781 358 WLPTYFSEELSLN-LTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSID-LGLP 435 (477)
Q Consensus 358 ~~~~~~~~~~g~~-~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~~~~l~~~~-~~~~ 435 (477)
++|.|+.+.+|.+ ..+.+.+.+...+...++.++.+++.||++++ +...... .......+.+.... ..+.
T Consensus 228 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-------~~~~~~~-~~~~~~~~~~~~~~~~~~~ 299 (352)
T PF07690_consen 228 FLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRR-------RRLLIAI-LLLILGALGLLLLPFSSSP 299 (352)
T ss_dssp HHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH-------HHHHHHH-HHHHHHHHHHCCSHHHCHH
T ss_pred ccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcH-------HHHHHHH-HHHHHHHHHHHHHHHhhhH
Confidence 9999988889999 88999999999999999999999999998865 1222222 22222222222221 1234
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhHhhhc-cCccchhhhhhhc
Q 011781 436 HWEIVGILTAGLALSSFALSGLYCTHQD-ISPEYASILLYLE 476 (477)
Q Consensus 436 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~p~~~g~~~gl~ 476 (477)
.+.....++.|.+.+... +......++ .+++++|+++|+.
T Consensus 300 ~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~g~~~g~~ 340 (352)
T PF07690_consen 300 VWLIIALFLIGFGFGIVF-PILFSLIQELVPPEYRGTAFGLF 340 (352)
T ss_dssp HHHHHHHHHHHHHHHHHC-HHHHHHHHCCCHTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCHHHHHHHHHHH
Confidence 455566677777655554 445555555 5567899999863
No 12
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.98 E-value=6.3e-30 Score=257.25 Aligned_cols=351 Identities=20% Similarity=0.214 Sum_probs=265.7
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHH
Q 011781 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLAT 193 (477)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 193 (477)
+.+..++++.++..++.....+..|.+.+++|.+..+.+++.+.+.++..++.++.|+++||+|||+++.++.++.+++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 81 (485)
T TIGR00711 2 LLTIVLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGS 81 (485)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 34566777888888999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred HHHHHhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHH
Q 011781 194 ALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFY 273 (477)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~ 273 (477)
+++. .+++++.+++.|++.|++.+...+...+++.+++|+++|+++++++.....+|..+||.+++++.++.+||+.|+
T Consensus 82 ~~~~-~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~ 160 (485)
T TIGR00711 82 LLCG-VAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFL 160 (485)
T ss_pred HHHh-CcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhh
Confidence 8775 677889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHh-ccCCcCCCCCCCCcchhh---------------hhhhhhhhh------------------HHh
Q 011781 274 IFGLLGIAWFSGFKIL-QEGETSNGATLAPRSNYI---------------NMKKSLSAS------------------LEE 319 (477)
Q Consensus 274 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~------------------~~~ 319 (477)
+.+.+.++..+...+. +++++++. +..+..... ..+..+.+. .++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (485)
T TIGR00711 161 INVPIGIIVVVVAFFILPRDKPAAS-ENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWE 239 (485)
T ss_pred hhhHHHHHHHHHHHHHcCCcccccc-CCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 9887776655544443 33322111 111100000 000000000 011
Q ss_pred hccCCCCCCHHHHhhcHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHH
Q 011781 320 MGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNL 399 (477)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~ 399 (477)
.+++.... ..+++++|.++...+..++..+..+....++|.|+++.+|+++.++++......++.+++.++.|++.||+
T Consensus 240 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~ 318 (485)
T TIGR00711 240 LTDDNPLV-DLRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKI 318 (485)
T ss_pred HcCCCCcc-CHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 11111111 24678899998888888888888888899999999998999999999999999999999999999999999
Q ss_pred HhcCcccceehhhhhHHhhhhhHHHHhhhc--ccCCCch-HHHHHHHHHHHHhhhhhhhhhhHhhhccCccchhhhhhhc
Q 011781 400 IATGVETTMVRKICQTIAFLSPAVCMTLSS--IDLGLPH-WEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLYLE 476 (477)
Q Consensus 400 g~~~~~~~~~r~~~~~~~~~~~~~~~~l~~--~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~g~~~gl~ 476 (477)
++| +... .+....++...+.. ....... ......++.|.+.+....+......+..+++++|+++|+.
T Consensus 319 ~~~--------~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 389 (485)
T TIGR00711 319 DPR--------KLVT-IGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLS 389 (485)
T ss_pred CcH--------HHHH-HHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHH
Confidence 876 3333 33333333333222 2222233 3344456667776666666666667778888899998863
No 13
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.98 E-value=1.1e-29 Score=259.57 Aligned_cols=184 Identities=14% Similarity=0.179 Sum_probs=160.8
Q ss_pred chhHHHHHHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHH
Q 011781 110 PQRYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIW 189 (477)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 189 (477)
+..|.++.++.++.+...+....++..+|.+.+++|++..+.+++.+++.++.+++++++|+++||+|||++++++.++.
T Consensus 163 ~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~ 242 (742)
T TIGR01299 163 RFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVN 242 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 34556666667777777778888899999999999999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcc----
Q 011781 190 SLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN---- 265 (477)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~---- 265 (477)
+++.++.+ ++++++.++++|++.|++.++..+...+++.+++|+++|++.+++..++..+|.++++.++..+...
T Consensus 243 ~i~~ll~a-fa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~ 321 (742)
T TIGR01299 243 GFFAFFSS-FVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWS 321 (742)
T ss_pred HHHHHHHH-HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccch
Confidence 88887774 6677899999999999999999999999999999999999999999999999999999888766543
Q ss_pred ---------cChhHHHHHHHHHHHHHHHHHHHhccCCc
Q 011781 266 ---------LGWESVFYIFGLLGIAWFSGFKILQEGET 294 (477)
Q Consensus 266 ---------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (477)
.+||+.+++.++..++.++..+++||.++
T Consensus 322 ~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPr 359 (742)
T TIGR01299 322 FQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPR 359 (742)
T ss_pred hccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 36899998888877777777777887754
No 14
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.97 E-value=3.2e-29 Score=247.60 Aligned_cols=331 Identities=15% Similarity=0.155 Sum_probs=228.3
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHhHHhhhhhhC---CCcchhhHHHH---HHHHHHHHhhhhhhhhhhhhcChhHHHHHHH
Q 011781 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSHRFG---WNSSVAGLVQS---SFFWGYALSQLPGGWLAKIFGGRKVLQTGVL 187 (477)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~s~~~~g~~~~---~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 187 (477)
..+...+++.++..++...++...|.+.++++ .+..+.+...+ ...++..++++++|+++||+|||+++..+.+
T Consensus 22 ~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~ 101 (432)
T PRK10406 22 WAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVC 101 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 44555667788889999999999999999985 45554444444 4444555999999999999999999999999
Q ss_pred HHHHHHHHHHHhhchH--------HHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhh
Q 011781 188 IWSLATALLPLLAGFM--------PGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLA 259 (477)
Q Consensus 188 ~~~~~~~~~~~~~~~~--------~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~ 259 (477)
+++++.++++ +.+++ ..++++|+++|++.+..++...+++.|++|+++|+++.++...+...|.++++.+.
T Consensus 102 ~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~ 180 (432)
T PRK10406 102 MMCFGSLVIA-CLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVV 180 (432)
T ss_pred HHHHHHHHHh-hcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHH
Confidence 9999888875 44433 35889999999999999999999999999999999999999888888888888776
Q ss_pred HHhh--------cccChhHHHHHHHHHHHHHHHHHHHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHH
Q 011781 260 PPII--------ENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKA 331 (477)
Q Consensus 260 ~~l~--------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (477)
..+. +.+|||+.|++.++..++........+|+++. ++. . ..+..++++
T Consensus 181 ~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~~~~~~~e~~~~--------~~~------------~---~~~~~~~~~ 237 (432)
T PRK10406 181 VVLQQTLEDAELREWGWRIPFALGAVLAVVALWLRRQLDETSQQ--------ETR------------A---LKEAGSLKG 237 (432)
T ss_pred HHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHhcCCCCchH--------HHh------------h---hcccccHHH
Confidence 5543 25799999998777666554332222222110 000 0 001224678
Q ss_pred HhhcHHHHHHHHHHHHh-HHHHHHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceeh
Q 011781 332 IFRSKAVWAMIYAHFCG-SWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVR 410 (477)
Q Consensus 332 ~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r 410 (477)
++++++.+...+..++. ...++.+.+|+|.|+++.+|++..+.+.......++..++..+.|+++||+++|
T Consensus 238 l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr-------- 309 (432)
T PRK10406 238 LWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRR-------- 309 (432)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch--------
Confidence 88898888766655443 566778889999999888899998888888888888889999999999999877
Q ss_pred hhhhHHhhhhhHHHH-hhhcccCCCchHHHHHHHHHHHHhhhhhhhhhhHhhhc-cCccchhhhhhhc
Q 011781 411 KICQTIAFLSPAVCM-TLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQD-ISPEYASILLYLE 476 (477)
Q Consensus 411 ~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~p~~~g~~~gl~ 476 (477)
+.......+...... .+.........+..+.+..++.+..+...+.......+ .+++.||+++|+.
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~ 377 (432)
T PRK10406 310 TSMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLS 377 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHH
Confidence 333322222211111 11111111122222222233323232333334455444 5566799999874
No 15
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.97 E-value=5.1e-29 Score=248.46 Aligned_cols=345 Identities=13% Similarity=0.079 Sum_probs=241.3
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHH
Q 011781 113 YKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLA 192 (477)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 192 (477)
++.+.......+........+.+..|.+.+++|++..+.+++.+.+.+++.+++++.|+++||+|||+++..+.++.+++
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~ 114 (476)
T PLN00028 35 MRAFHLSWISFFTCFVSTFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPA 114 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHH
Confidence 44555555566666667777888899999999999999999999999999999999999999999999999998888888
Q ss_pred HHHHHHhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhc--------
Q 011781 193 TALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE-------- 264 (477)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~-------- 264 (477)
.++.+ .+++++.++++|++.|++.+... ....++.+++|+++|++++|+.....++|..+++.+.+.+..
T Consensus 115 ~~~~~-~~~s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~ 192 (476)
T PLN00028 115 VFCMS-LVSSATGFIAVRFFIGFSLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAP 192 (476)
T ss_pred HHHHH-HhcCHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 77764 56677888899999999887654 456688999999999999999988888888777766655432
Q ss_pred -ccChhHHHHHHHHHHHHHHHHHHHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHH
Q 011781 265 -NLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIY 343 (477)
Q Consensus 265 -~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 343 (477)
..|||+.|++.+++.++..+..++++++.++...+ +.++ +. +.++......+++.++++++|.+.+
T Consensus 193 ~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~~~~~--~~~~----~~-------~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (476)
T PLN00028 193 SFTAWRIAFFVPGLLHIIMGILVLTLGQDLPDGNYR--ELKK----SG-------TMPKDSFSKVLRYGVTNYRTWILAL 259 (476)
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHcCcCCCCchh--hHHh----cC-------ccccccHHHHHHHHHcCchhHHHHH
Confidence 25899999999998887766666665443221100 0000 00 0000000112456678888888877
Q ss_pred HHHHhHHHHHHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhhhHH
Q 011781 344 AHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAV 423 (477)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~ 423 (477)
..++.......+..++|.|+.+.+|++...++.+.+...++.+++++++|+++||+++|... +.|+.......++.++
T Consensus 260 ~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~--~~r~~~~~~~~~l~~i 337 (476)
T PLN00028 260 TYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGM--RGRLWALWIVQTLGGV 337 (476)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCc--chhHHHHHHHHHHHHH
Confidence 76666666667788899999888899999999999999999999999999999999986321 1123333333333333
Q ss_pred HHhhhcccCCCchHHHHHHHHHHHHhhhhhhhhhhHhhhccCccchhhhhhhc
Q 011781 424 CMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLYLE 476 (477)
Q Consensus 424 ~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~g~~~gl~ 476 (477)
..++.... .+....++.+++++.+.... ......+..++.|+++|++.|+.
T Consensus 338 ~~~~~~~~-~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~g~~~g~~ 388 (476)
T PLN00028 338 FCIWLGRA-NSLGAAIVVMILFSIFVQAA-CGATFGIVPFVSRRSLGVISGLT 388 (476)
T ss_pred HHHHhccc-chHHHHHHHHHHHHHHHHHh-hhhhcccCcccChhhchhhhhhh
Confidence 22222221 22222233333444433322 23344455567788899988874
No 16
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.97 E-value=1.4e-29 Score=244.87 Aligned_cols=334 Identities=13% Similarity=0.070 Sum_probs=250.6
Q ss_pred HHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHH
Q 011781 119 TSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPL 198 (477)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 198 (477)
++...++..++.....+.+|.+..+++.+..++|++.+++.++..++++++|+++||+|||+++..+.++.+++.++...
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 83 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPF 83 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHH
Confidence 44566777788888888999999999999999999999999999999999999999999999999998887777766643
Q ss_pred hh----chHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHHH
Q 011781 199 LA----GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYI 274 (477)
Q Consensus 199 ~~----~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~ 274 (477)
.. .+++.+++.|++.|++.+...+...+++.|++|+++|++++++.+....+|.++||.+++.+.+..|||+.|++
T Consensus 84 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~ 163 (365)
T TIGR00900 84 VALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWV 163 (365)
T ss_pred HHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 33 16788999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHHHHHHhHHHHHH
Q 011781 275 FGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYT 354 (477)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 354 (477)
.++..++..+..+.++.++++++++.+.+++. .++. ...++.++++|.++...+..++.......
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (365)
T TIGR00900 164 DAVGFAISALLIVSVRIPELAASEIQALSNAV----------LRDT-----REGIKFVLKNPLLRTLLLLALLFNLVFAP 228 (365)
T ss_pred HHHHHHHHHHHHHhcccccCCCccccccchhH----------HHHH-----HhHHHHHHcCcHHHHHHHHHHHHHHHHHH
Confidence 88776665555444433322211111000000 0000 11346778899998888877777777766
Q ss_pred Hh-hhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhhhHHHHhhhcccCC
Q 011781 355 CL-SWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLG 433 (477)
Q Consensus 355 ~~-~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~~~~l~~~~~~ 433 (477)
.. .+.|.|.++.+|.+..+.+.+.....++.+++.++.+++.||++++ +... .+....++...+.....+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--------~~~~-~~~~~~~~~~~~~~~~~~ 299 (365)
T TIGR00900 229 AIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRM--------ALMT-GAIFVIGLAILVVGLTPP 299 (365)
T ss_pred HHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchh--------HHHH-HHHHHHHHHHHHHHhhch
Confidence 66 7889999877899999999999999999999999999999998765 3332 223333333333222221
Q ss_pred CchHHHHHHHHHHHHhhhhhhhhhhHhhhccCccchhhhhhhc
Q 011781 434 LPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLYLE 476 (477)
Q Consensus 434 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~g~~~gl~ 476 (477)
+.....+..++.|.+.+...........+..+++++|+++|+.
T Consensus 300 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 342 (365)
T TIGR00900 300 NFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQ 342 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 2233345556666665555544444455556778899998863
No 17
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.97 E-value=3e-29 Score=244.68 Aligned_cols=268 Identities=18% Similarity=0.221 Sum_probs=223.0
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHH
Q 011781 113 YKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLA 192 (477)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 192 (477)
++.+..+.+..+....+...+.+..|.+.+++|.++.+.+++.+++.++..+++++.|+++||+|||+.+..+.++.+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~ 83 (385)
T TIGR00710 4 KAFALLLGCLSILGPLGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALS 83 (385)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHH
Confidence 34455555555666778888888999999999999999999999999999999999999999999999999999888888
Q ss_pred HHHHHHhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHH
Q 011781 193 TALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVF 272 (477)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~ 272 (477)
.+++. ..++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+....+|..++|.+++.+.+..+||+.|
T Consensus 84 ~~~~~-~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~ 162 (385)
T TIGR00710 84 SLGLA-LSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIF 162 (385)
T ss_pred HHHHH-HHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHH
Confidence 87774 56777889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHh-ccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHHHHHHhHHH
Q 011781 273 YIFGLLGIAWFSGFKIL-QEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWG 351 (477)
Q Consensus 273 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 351 (477)
++.+++.++..+...+. +++++++++ ++.+ +. ...+++.+++|.++...+...+....
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-----~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (385)
T TIGR00710 163 AFLSLAGILLSALIFFILPETLPYEAR---IQIS-----TY-------------FETFLLLLKSKMFWGYALIYGASFGG 221 (385)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCCccc---CCHH-----HH-------------HHHHHHHHcCchhHHHHHHHHHHHHH
Confidence 99888777665554443 332221110 0000 00 01245778889888887777777777
Q ss_pred HHHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhc
Q 011781 352 HYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIAT 402 (477)
Q Consensus 352 ~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~ 402 (477)
......+.|.++++.+|.++.+.+.+.....++.+++.++.+++.||+++|
T Consensus 222 ~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~ 272 (385)
T TIGR00710 222 FFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAK 272 (385)
T ss_pred HHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH
Confidence 777888899999888999999999999999999999999999999999877
No 18
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.97 E-value=4.5e-29 Score=245.05 Aligned_cols=356 Identities=13% Similarity=0.138 Sum_probs=244.4
Q ss_pred chhHHHHHHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHH
Q 011781 110 PQRYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIW 189 (477)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 189 (477)
+++|+.+..+++..+...++....++..|.+.+++|.+..+.+++.+++.++..+++++.|+++||+|||+++..+.++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~ 87 (405)
T TIGR00891 8 RAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLF 87 (405)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 34667888888999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred HHHHHHHHHhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccC--
Q 011781 190 SLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG-- 267 (477)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g-- 267 (477)
+++.+++. +.++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|.++++.+++.+.+..+
T Consensus 88 ~~~~~~~~-~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~ 166 (405)
T TIGR00891 88 SAGTLACG-FAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDG 166 (405)
T ss_pred HHHHHHHH-HhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 88887774 567788999999999999999999999999999999999999999999999999999999999988766
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCC--CCCHHHHh-hc-HHHHHHHH
Q 011781 268 WESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLK--DVPWKAIF-RS-KAVWAMIY 343 (477)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~-~~~~~~~l 343 (477)
||+.|++.++..++..+.....+++++..++...++......++.... ....+...+ ....+... +. +.+....+
T Consensus 167 w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (405)
T TIGR00891 167 WRALFFISILPIIFALWLRKNIPEAEDWKEKHAGKALVRTMVDILYGG-EHRIANIVMTLAAAMVQSAGKRWPTFVYLVV 245 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCChhHHHHhhhhhhhhhHHHHHhcc-chhhhhhhhhhhHHhhhhhhhhhHHHHHHHH
Confidence 999998876665555544444554332111110000000000000000 000000000 00001111 11 11222333
Q ss_pred HHHHhHHHHHHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhhhHH
Q 011781 344 AHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAV 423 (477)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~ 423 (477)
...+..........++|.|+.+.+|++..+.+.+.+...++.+++.++.+++.||+++| +............
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~--------~~~~~~~~~~~~~ 317 (405)
T TIGR00891 246 LVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRR--------KAYVCSLLAGQLL 317 (405)
T ss_pred HHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCch--------hhhHHHHHHHHHH
Confidence 33344444556677899999888899999999999999999999999999999999876 3332222222122
Q ss_pred HHhhhcccCCCchHHHHHHHHHHHHhhhhhhhhhhHhhhccCccchhhhhhhc
Q 011781 424 CMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLYLE 476 (477)
Q Consensus 424 ~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~g~~~gl~ 476 (477)
.+.+... ..+.....+..++.+.+..+........+.+..+++++|+++|+.
T Consensus 318 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 369 (405)
T TIGR00891 318 IIPVFAI-GANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFT 369 (405)
T ss_pred HHHHHHh-CCchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHH
Confidence 2222222 122222333334444444444333333444456677799998863
No 19
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.97 E-value=3.5e-29 Score=240.44 Aligned_cols=317 Identities=16% Similarity=0.050 Sum_probs=220.9
Q ss_pred HHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhchHHH
Q 011781 126 CNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPG 205 (477)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (477)
+......+++.+|.+.+++|+|..+.|++.+.+.+++.+++++.|+++||+|||+++..+......+. +.....++++.
T Consensus 3 ~~~~~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~-~~~~~~~~~~~ 81 (368)
T TIGR00903 3 SQAIWVTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAA-GRLLDPFNYEW 81 (368)
T ss_pred hhHHHHHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHH-HHHHHhccHHH
Confidence 44567788899999999999999999999999999999999999999999999987765544443333 33233367889
Q ss_pred HHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHHHHHHHHHHHHHH
Q 011781 206 LVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSG 285 (477)
Q Consensus 206 ~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~ 285 (477)
+++.|++.|++.+. .+.....+++++|+++|++++++...+..+|.++++.+++++.+++|||+.|++.+++.++..++
T Consensus 82 l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~ 160 (368)
T TIGR00903 82 LLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIIL 160 (368)
T ss_pred HHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHH
Confidence 99999999999885 55666677999999999999999999999999999999999999999999999988887665544
Q ss_pred HH-HhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHHHHHHhHHHHHHHhhhhhHHHH
Q 011781 286 FK-ILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFS 364 (477)
Q Consensus 286 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 364 (477)
.+ +++|+++.+.+ ..+. . +. ..++++++++|.+|.+.+..++....++++.+|+|.|++
T Consensus 161 ~~~~lp~~p~~~~~----~~~~---~-------~~------~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~ 220 (368)
T TIGR00903 161 VLAALPALPFQAAE----GFGF---K-------DA------VKEFGALAGRKDLWIIGAILGFGVALFDNLAIWLEAALR 220 (368)
T ss_pred HHHHcCCCCCCCCC----Ccch---H-------HH------HHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44 44544322110 0000 0 00 012578899999999999999999999999999999997
Q ss_pred HhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhhhHHHHhhhcccCCCchHHHHHHHH
Q 011781 365 EELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILT 444 (477)
Q Consensus 365 ~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 444 (477)
+ .|++.. .+.......+.+.++ .++++||..|++. |+.......+..++.+.+.... .+....+..+.+
T Consensus 221 ~-~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~~r~~~-----r~~~~~~~~~~~a~~~~~~~~~-~~~~~~~~~~~l 289 (368)
T TIGR00903 221 P-AGLEDI-AGDAVALAILAGLIG---VAVIPDRVARAGL-----RSIYIRAAALLIAAFFLALAFE-LNRLALFAFIGI 289 (368)
T ss_pred H-CCCChH-HHHHHHHHHHHHHHH---HHHhhHHhhhhhh-----HHHHHHHHHHHHHHHHHHHHHc-cccHHHHHHHHH
Confidence 6 678765 565655656655555 4778888765421 1222221222222222222221 122222222322
Q ss_pred HHHHhhhhhhhhhhHhhhc-cCccchhhhhhhc
Q 011781 445 AGLALSSFALSGLYCTHQD-ISPEYASILLYLE 476 (477)
Q Consensus 445 ~g~~~~~~~~~~~~~~~~~-~~p~~~g~~~gl~ 476 (477)
.+++ .....+..+.+..+ .+++.||+++|+.
T Consensus 290 ~~~~-~~~~~~~~~~~~~~~~p~~~rgt~~G~~ 321 (368)
T TIGR00903 290 AGLL-MLPAYAIIMDWIGKFCDKELHGKAAGAI 321 (368)
T ss_pred HHHh-hhhhHHHHHHHHHHhcchhhcCcccchh
Confidence 3332 33333445555555 4555799999874
No 20
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.97 E-value=6.2e-30 Score=248.68 Aligned_cols=346 Identities=17% Similarity=0.189 Sum_probs=247.5
Q ss_pred HHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhc
Q 011781 122 AFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAG 201 (477)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~ 201 (477)
+++........++...|.+.+++|.+..+.|++.+++.++..++.++.|+++||+|||+++..+.++.+++.+++. ..+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~-~~~ 81 (379)
T TIGR00881 3 GYAAYYLVRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFG-FST 81 (379)
T ss_pred hhhHHHHhHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHH-Hhh
Confidence 4556777888899999999999999999999999999999999999999999999999999999999888888775 566
Q ss_pred hHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHH-hhhHHhhcccChhHHHHHHHHHHH
Q 011781 202 FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGL-LLAPPIIENLGWESVFYIFGLLGI 280 (477)
Q Consensus 202 ~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~-~~~~~l~~~~g~~~~~~~~~~~~~ 280 (477)
+++.+++.|++.|++.+...+...+++.+++|+++|++++++.+.+..+|.+++| .+++.+.+..+||+.|++.+++.+
T Consensus 82 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (379)
T TIGR00881 82 SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAI 161 (379)
T ss_pred hHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHH
Confidence 7889999999999999999999999999999999999999999999999999999 577777778899999999888776
Q ss_pred HHHHHHHHh-ccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHHHHHHhHHHHHHHhhhh
Q 011781 281 AWFSGFKIL-QEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWL 359 (477)
Q Consensus 281 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 359 (477)
+..+...+. +++++.+.....++......++. ...++.+....+..++.++++|.+|...+..++.......+..+.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (379)
T TIGR00881 162 IVSLICFLLLRDSPQSCGLPPAEEMPNEEPDGD--AEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTGILDWS 239 (379)
T ss_pred HHHHHHheeeCCCccccccCccccCcccccccc--cccccccccchHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 655444443 33322211111110000000000 000000011112235677889999998888888888888899999
Q ss_pred hHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhhhHHHHhhhccc-CCCchHH
Q 011781 360 PTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSID-LGLPHWE 438 (477)
Q Consensus 360 ~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~~~~l~~~~-~~~~~~~ 438 (477)
|.|+.+.+|++..+.+...+...++.++++++.+++.||..+++ +..............+...... ..+..+.
T Consensus 240 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (379)
T TIGR00881 240 PLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGR------RGPLAVFFMALIIVSLLVYWLNPAANPLMD 313 (379)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCc------chHHHHHHHHHHHHHHHHHhcCcchhHHHH
Confidence 99999888999999999999999999999999999999975441 1222111111112222221111 1122333
Q ss_pred HHHHHHHHHHhhhhhhhhhhHhhhccCccchhhhhhhc
Q 011781 439 IVGILTAGLALSSFALSGLYCTHQDISPEYASILLYLE 476 (477)
Q Consensus 439 ~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~g~~~gl~ 476 (477)
.+..++.|....+..........+..+++++|+++|+.
T Consensus 314 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 351 (379)
T TIGR00881 314 LICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFV 351 (379)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHH
Confidence 34444455443333333333344556677799998864
No 21
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.97 E-value=1.2e-28 Score=242.11 Aligned_cols=334 Identities=19% Similarity=0.229 Sum_probs=244.3
Q ss_pred hhHHHHHHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHH
Q 011781 111 QRYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWS 190 (477)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 190 (477)
++|..+...+...+...++....+...|.+.+++|.++.+.|++.+.+.++..+++++.|+++||+|||+++..+.++..
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 91 (406)
T PRK11551 12 RLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFG 91 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHH
Confidence 45667777777888888999999999999999999999999999999999999999999999999999999999988888
Q ss_pred HHHHHHHHhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhH
Q 011781 191 LATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWES 270 (477)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~ 270 (477)
++.+++. ..++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|..+++.+++.+.+..+|++
T Consensus 92 ~~~~~~~-~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 170 (406)
T PRK11551 92 LFSLATA-QAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRH 170 (406)
T ss_pred HHHHHHH-HhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHH
Confidence 8776664 567788999999999999999999999999999999999999999999999999999999999988899999
Q ss_pred HHHHHHHHHHHHHHHHH-HhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhh---cHHHHHHHHHHH
Q 011781 271 VFYIFGLLGIAWFSGFK-ILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFR---SKAVWAMIYAHF 346 (477)
Q Consensus 271 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~ 346 (477)
.|++.+++.++..+... +++++++...++..++.+ + ...+..++ .+..+...+..+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-----~---------------~~~~~~~~~~~~~~~~~~~~~~~ 230 (406)
T PRK11551 171 IFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGKQR-----A---------------PVLRALFGEGRATATLLLWISYF 230 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCChhHHhccCcchhh-----h---------------hhHHHHhhhhhhhHHHHHHHHHH
Confidence 99998876655544333 345443221111000000 0 00011111 223333444444
Q ss_pred HhHHHHHHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhhhHHHHh
Q 011781 347 CGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMT 426 (477)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~~~~ 426 (477)
+.....+....++|.|+++ .|++..+.+.+.+...++.++++++.|++.||++++ +.... ..+...+.+.
T Consensus 231 ~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~--------~~~~~-~~~~~~~~~~ 300 (406)
T PRK11551 231 FTLIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPR--------RVVLL-IYAGILASLA 300 (406)
T ss_pred HHHHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHH--------HHHHH-HHHHHHHHHH
Confidence 4455566777889999976 699999999999999999999999999999999876 33322 2222222222
Q ss_pred hhcccCCCchHHHHHHHHHHHHhhhhhhhhhhHhhhccCccchhhhhhhc
Q 011781 427 LSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLYLE 476 (477)
Q Consensus 427 l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~g~~~gl~ 476 (477)
.... ..+.....+..++.|.+..+..........+..+++++|+++|+.
T Consensus 301 ~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~ 349 (406)
T PRK11551 301 ALAA-APSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAA 349 (406)
T ss_pred HHHh-cCcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHH
Confidence 2222 122333344445555555444444444444556777799998864
No 22
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.97 E-value=2.7e-28 Score=237.70 Aligned_cols=324 Identities=15% Similarity=0.153 Sum_probs=233.6
Q ss_pred hHHHHHHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHH
Q 011781 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (477)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 191 (477)
.|+.+..+..+.+............+|.+.+++|.++.+.|+..+++.++..+++++.|++.||+|||+++..+.++.++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~ 97 (394)
T PRK10213 18 NWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTL 97 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHH
Confidence 34444444444444444444555678889999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHH
Q 011781 192 ATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESV 271 (477)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~ 271 (477)
+.+++. ..++++.+++.|++.|++.+...+...+++.|++|+++|++++++.....++|.++||.+++.+.+.+|||+.
T Consensus 98 ~~~~~~-~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~ 176 (394)
T PRK10213 98 SCLLVS-FANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNV 176 (394)
T ss_pred HHHHHH-HHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHH
Confidence 887775 5788899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHH-hccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHHHHHHhHH
Q 011781 272 FYIFGLLGIAWFSGFKI-LQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSW 350 (477)
Q Consensus 272 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 350 (477)
|++.+++.++..+.... .++.+. ++ .+. ..+.++.+++|.+|...+..++...
T Consensus 177 f~~~~~l~~~~~l~~~~~~p~~~~---~~-~~~----------------------~~~~~~~l~~~~~~~~~~~~~~~~~ 230 (394)
T PRK10213 177 FNAAAVMGVLCIFWIIKSLPSLPG---EP-SHQ----------------------KQNTFRLLQRPGVMAGMIAIFMSFA 230 (394)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCc---cc-ccc----------------------hhHHHHHhcCHHHHHHHHHHHHHHH
Confidence 99988766654433322 232211 00 000 0123567889999887776666666
Q ss_pred HHHHHhhhh-hHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhhhHHHHhhhc
Q 011781 351 GHYTCLSWL-PTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSS 429 (477)
Q Consensus 351 ~~~~~~~~~-~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~~~~l~~ 429 (477)
.......++ |.|. +++|+++...+.+....+++.+++.++.+++.||.++ +.......+..+..+.+..
T Consensus 231 ~~~~~~~~~~p~~~-~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~---------~~l~~~~~~~~~~~~~l~~ 300 (394)
T PRK10213 231 GQFAFFTYIRPVYM-NLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVK---------LALAGAPLVLAVSALVLTL 300 (394)
T ss_pred HHHHHHHHHHHHHH-HhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccch---------hHHHHHHHHHHHHHHHHHH
Confidence 666666676 5555 5679999999999999999999999999999998532 2222222222222222222
Q ss_pred ccCCCchHHHHHHHHHHHHhhhhhhhhhhHhhhccCccchhhhhh
Q 011781 430 IDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLY 474 (477)
Q Consensus 430 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~g~~~g 474 (477)
. .++.....+..++.|.+.+... +......++..|++.+++.+
T Consensus 301 ~-~~~~~~~~~~~~l~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 343 (394)
T PRK10213 301 W-GSDKIVATGVAIIWGLTFALVP-VGWSTWITRSLADQAEKAGS 343 (394)
T ss_pred H-hhhHHHHHHHHHHHHHHHHhhh-HHHHHHHHHHCcccHHHHHH
Confidence 2 1223333444555565554444 44444444444566555544
No 23
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.97 E-value=7e-29 Score=245.38 Aligned_cols=278 Identities=19% Similarity=0.248 Sum_probs=212.8
Q ss_pred hHHHHHHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHH
Q 011781 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (477)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 191 (477)
+++.+....+..+...++.....+..|.+.+++|+++.+.+++.+++.++..+++++.|+++||+|||+++..+.++.++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~ 95 (426)
T PRK12307 16 QKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSV 95 (426)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHH
Confidence 44566677778888888888899999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHH
Q 011781 192 ATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESV 271 (477)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~ 271 (477)
+.++.+ ..++++.++++|++.|++.+...+....++.|++|+++|++++++...+..+|.++++.+.+.+.+..+||+.
T Consensus 96 ~~~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~ 174 (426)
T PRK12307 96 GTGLSG-LASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAA 174 (426)
T ss_pred HHHHHH-HHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHH
Confidence 887775 5677899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHHHHH---Hh
Q 011781 272 FYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHF---CG 348 (477)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~ 348 (477)
|++..+..++........+++++..+++.+++. + .++.........++.+++++.++...+... ..
T Consensus 175 f~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~------~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (426)
T PRK12307 175 FFVGLLPVLLVIYIRARAPESKEWEEAKLSGKG------K-----HSQSAWSVFSLSMKGLFNRAQFPLTLCVFIVLFSI 243 (426)
T ss_pred HHHHHHHHHHHHHHHHHCCCChHHHHhhhhccc------c-----ccccchhhhhHHHHHHHhhchHHHHHHHHHHHHHH
Confidence 988544333222211111221110000000000 0 000000001124567788887765443222 22
Q ss_pred HHHHHHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhc
Q 011781 349 SWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIAT 402 (477)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~ 402 (477)
......+..++|.|+++ .|.++...+.+.+...++.++++++.|++.||+++|
T Consensus 244 ~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~ 296 (426)
T PRK12307 244 FGANWPIFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLK 296 (426)
T ss_pred HHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH
Confidence 23334467789999976 699999999999999999999999999999999876
No 24
>PRK03699 putative transporter; Provisional
Probab=99.97 E-value=2e-28 Score=239.20 Aligned_cols=329 Identities=17% Similarity=0.167 Sum_probs=243.2
Q ss_pred hhHHHHHHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHH
Q 011781 111 QRYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWS 190 (477)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 190 (477)
++++.....++..++........+...|.+.+++|+|..+.+++.+.+.+++.+++++.|++.||+|||+++..+.++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~ 83 (394)
T PRK03699 4 NRIKLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMI 83 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 35567777777888888888889999999999999999999999999999999999999999999999999999988888
Q ss_pred HHHHHHHHhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhc-ccChh
Q 011781 191 LATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE-NLGWE 269 (477)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~-~~g~~ 269 (477)
++.++.. ..++++.+++.|++.|++.+...+....++.+++|+++|+++++..+....+|..++|.+.+.+.. ..|||
T Consensus 84 i~~~l~~-~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~ 162 (394)
T PRK03699 84 LAVAGLM-FSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWY 162 (394)
T ss_pred HHHHHHH-HcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHH
Confidence 8887774 567778899999999999998888999999999998899999999999999999999999888764 57999
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHHHHHHhH
Q 011781 270 SVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGS 349 (477)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 349 (477)
+.|++.+++.++..+..++...++.+++ + .++.+ ... +. ..++.++...+..++..
T Consensus 163 ~~f~~~~~~~~~~~~~~~~~~~p~~~~~-~-~~~~~-----------------~~~----~~-~~~~~~~~~~~~~~~~~ 218 (394)
T PRK03699 163 WVYACIGLVYVAIFILTLFSEFPALGKH-A-PKADK-----------------PVA----KE-KWGIGVLFLAIAALLYI 218 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCcccccc-C-ccccC-----------------ccc----cc-cCChHHHHHHHHHHHHH
Confidence 9999988877665554443221111110 0 00000 000 01 12456677777777777
Q ss_pred HHHHHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhhhHHHHhhhc
Q 011781 350 WGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSS 429 (477)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~~~~l~~ 429 (477)
..+..+..|+|.|+++.+|+++.+.+.+.+...++..+++++.++++||+++| +....... +..+.+.+..
T Consensus 219 ~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~--------~~l~~~~~-~~~~~~~~~~ 289 (394)
T PRK03699 219 LAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQ--------RILTVLAG-LALVLMYLFV 289 (394)
T ss_pred HHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchh--------hHHHHHHH-HHHHHHHHHH
Confidence 77788899999999888999999999999999999999999999999999876 33332222 2222222222
Q ss_pred ccCCCchHHHHHHHHHHHHhhhhhhhhhhHhhhccCccchhhhhhh
Q 011781 430 IDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLYL 475 (477)
Q Consensus 430 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~g~~~gl 475 (477)
. .++..+..+..++.|++.+... +.......+..|+++++..|.
T Consensus 290 ~-~~~~~~~~~~~~~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~g~ 333 (394)
T PRK03699 290 N-TDDPSHLLYAILGLGFFSSAIY-TTIITLGSQQTKVASPKLVNF 333 (394)
T ss_pred H-cCCchHHHHHHHHHHHHHHHHH-HHHHHHHHHHccCCCHHHHHH
Confidence 2 2233444455556666544443 333334444445555555543
No 25
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.97 E-value=5.7e-29 Score=241.75 Aligned_cols=319 Identities=16% Similarity=0.156 Sum_probs=232.5
Q ss_pred hhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhchHHHHH
Q 011781 128 MDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLV 207 (477)
Q Consensus 128 ~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (477)
.....+++..|.+.+++|++..+.|++.+++.+++.+++++.|+++||+|||+++..+.++.+++.+++. ..++++.++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 95 (377)
T TIGR00890 17 GYVYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYA-IADSLAALY 95 (377)
T ss_pred hHHhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHH-HHHHHHHHH
Confidence 3456678889999999999999999999999999999999999999999999999999999888887774 677889999
Q ss_pred HHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHHHHHHHHHHHHHHHH
Q 011781 208 LSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFK 287 (477)
Q Consensus 208 ~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 287 (477)
+.|++.|++.+..++.....+.+++| ++|+++.++...+..+|..+++.+.+.+.+..|||+.|++.+++.++..+..+
T Consensus 96 ~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 174 (377)
T TIGR00890 96 LTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGA 174 (377)
T ss_pred HHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999888888888889887 68999999999999999988877777777888999999999988877665555
Q ss_pred HhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHhh
Q 011781 288 ILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEEL 367 (477)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 367 (477)
++.++++++..+++++.+ .++...++.++++.++...+..++..........+.+.|.++ +
T Consensus 175 ~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 235 (377)
T TIGR00890 175 FLIGYPPGQLIKTNIEVS------------------VKDYTVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPYGQS-L 235 (377)
T ss_pred HheecCchhccccCcccc------------------hhhhhHHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHHHHHH-c
Confidence 443322211111000000 001134577888888887777666666666666777777754 7
Q ss_pred CCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhhhHHHHhhhcccCCCch-HHHHHHHHHH
Q 011781 368 SLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPH-WEIVGILTAG 446 (477)
Q Consensus 368 g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~g 446 (477)
|.+..+.+.+.+...++.++++++.|++.||+++| +.... +.....+...+......... .......+.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~--------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 306 (377)
T TIGR00890 236 GLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQ--------KTMSI-VFGISAVGMAAMLFIPMLNDVLFLATVALVF 306 (377)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--------hhhhH-HHHHHHHHHHHHHHcccchhHHHHHHHHHHH
Confidence 88888899999999999999999999999999876 33322 22222222222222221112 2223334445
Q ss_pred HHhhhhhhhhhhHhhhccCccchhhhhhhc
Q 011781 447 LALSSFALSGLYCTHQDISPEYASILLYLE 476 (477)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~p~~~g~~~gl~ 476 (477)
.+.+...........+..+++++|+++|+.
T Consensus 307 ~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~ 336 (377)
T TIGR00890 307 FTWGGTISLFPSLVSDIFGPANSAANYGFL 336 (377)
T ss_pred HHhccchhccHHHHHHHhhhhhhhhHhHHH
Confidence 444443333333344456677799988863
No 26
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.97 E-value=1.1e-28 Score=239.04 Aligned_cols=340 Identities=16% Similarity=0.141 Sum_probs=239.5
Q ss_pred HHHHHHHHHHhhhhHHHHhHHh-hhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHH
Q 011781 118 TTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALL 196 (477)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 196 (477)
..+++.+........+.+..|. +.+++|+++.+.+++.+++.+++.++++++|+++||+|||+.+.++.++..++.+++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~ 84 (366)
T TIGR00886 5 FSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWA 84 (366)
T ss_pred HHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHH
Confidence 4566666777888889999995 889999999999999999999999999999999999999999999999998888877
Q ss_pred HHhhc-hHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhc----------c
Q 011781 197 PLLAG-FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE----------N 265 (477)
Q Consensus 197 ~~~~~-~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~----------~ 265 (477)
+ ..+ +++.+++.|++.|++.+ ..+....++.+++|+++|++++++.....++|..+++.+++.+.. .
T Consensus 85 ~-~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~ 162 (366)
T TIGR00886 85 G-LAVQSYSVLLLLRLFIGIAGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAH 162 (366)
T ss_pred H-HHhhhHHHHHHHHHHHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 5 455 77889999999999865 456678899999999999999999998888888888888776654 3
Q ss_pred cChhHHH-HHHHHHHHHHHHHHH-HhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHH
Q 011781 266 LGWESVF-YIFGLLGIAWFSGFK-ILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIY 343 (477)
Q Consensus 266 ~g~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 343 (477)
.+||+.| +..+++.++..++.+ ..++.+++++++.+.+.+. ... . .++.......+.+++|.+|...+
T Consensus 163 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~------~~~~~~~~~~~~~~~~~~~~~~~ 232 (366)
T TIGR00886 163 LAWGWAFVIVPAGILLLPALLIFFVGADTPPGKPATGKLSFKG--ARW--S------VGTGALGDQLKVFRDRHTWILAL 232 (366)
T ss_pred ccccchhHHHHHHHHHHHHHHHHHhcccCCcccccchhccccc--ccc--c------ccchhHHHHHHHHhccchhhHHH
Confidence 4899999 444555444433333 3333322111110000000 000 0 00000013457788888888888
Q ss_pred HHHHhHHHHHHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhhhHH
Q 011781 344 AHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAV 423 (477)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~ 423 (477)
..++..........+.|.|+++.+|+++.+++.+.....+..+++++++|++.||+|+| +.............
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~-------~~~~~~~~~~~~~~ 305 (366)
T TIGR00886 233 LYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGA-------RKLLMSFLGVAMGA 305 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccc-------hhHHHHHHHHHHHH
Confidence 77777777788889999999988999999999999999999999999999999999886 22222222222222
Q ss_pred HHhhhcccCCCchHHHHHHHHHHHHhhhhhhhhhhHhhhccCccchhhhhhhc
Q 011781 424 CMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLYLE 476 (477)
Q Consensus 424 ~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~g~~~gl~ 476 (477)
.++..........+..+..........+...........++.|+++|+++|+.
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~g~~ 358 (366)
T TIGR00886 306 FLVVLGLVSPLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFRRATGAVSGLV 358 (366)
T ss_pred HHHHhcCCCcchHHHHHHHHHHHHHHhccccchhhhcchhhchhhcccHHHHH
Confidence 22222221111233333333333333344445566666777788999999863
No 27
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.97 E-value=1.2e-28 Score=241.91 Aligned_cols=332 Identities=16% Similarity=0.138 Sum_probs=246.5
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHH
Q 011781 113 YKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLA 192 (477)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 192 (477)
+.....+.+..+...+....+.+.+|.+.+++|.+..+.++..+.+.+++.+++++.|+++||+|||+++..+..+.+++
T Consensus 12 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~ 91 (406)
T PRK15402 12 LLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILT 91 (406)
T ss_pred HHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHH
Confidence 34445555666666778888888899999999999999999999999999999999999999999999999998888888
Q ss_pred HHHHHHhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHH
Q 011781 193 TALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVF 272 (477)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~ 272 (477)
.+++. ..++++.+++.|++.|++.+...+...+.+.|.+|+++|.+++++......+|..+||.+++.+.+..+||+.|
T Consensus 92 ~~~~~-~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~ 170 (406)
T PRK15402 92 CLAIL-LAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMF 170 (406)
T ss_pred HHHHH-HHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHH
Confidence 77764 56777889999999999999888999999999999999999999999888999999999999999989999999
Q ss_pred HHHHHHHHHHHHHHHH-hccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHHHHHHhHHH
Q 011781 273 YIFGLLGIAWFSGFKI-LQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWG 351 (477)
Q Consensus 273 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 351 (477)
++.+++.++..+..++ .++++++..+ +.+. + + ...+++.++++|.++...+..++....
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~----~---~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (406)
T PRK15402 171 VLFAALAALSFFGLWRAMPETAGRVGE----KLSL----K---E---------LGRDYKLVLKNRRFVAGALALGLVSLP 230 (406)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCccccc----cccH----H---H---------HHHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 9988887766554433 3333211110 0000 0 0 011246788999998888777776666
Q ss_pred HHHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhhhHHHHhhhc--
Q 011781 352 HYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSS-- 429 (477)
Q Consensus 352 ~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~~~~l~~-- 429 (477)
......+.|.|+.+.+|+++.+.++......++.+++.++.+++.||+++| +.... +.+..++.+.+..
T Consensus 231 ~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~--------~~~~~-~~~~~~~g~~~~~~~ 301 (406)
T PRK15402 231 LLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLR--------SLIRM-GLWPMVAGLLLAALA 301 (406)
T ss_pred HHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH--------HHHHH-HHHHHHHHHHHHHHH
Confidence 667777889998888899999999888888888999999999999999876 33222 2222222211111
Q ss_pred --ccCCCchHHHHHHHHHHHHhhhhhhhhhhHhhhccCccchhhhhhh
Q 011781 430 --IDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLYL 475 (477)
Q Consensus 430 --~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~g~~~gl 475 (477)
....+..+..+..++.+.+.+.... ..........++++|++.|+
T Consensus 302 ~~~~~~~~~~~~~~~~~~g~g~~~~~~-~~~~~~~~~~~~~~g~~~~~ 348 (406)
T PRK15402 302 TVISSHAYLWLTAGLSLYAFGIGLANA-GLYRLTLFSSDVSKGTVSAA 348 (406)
T ss_pred HHcccccHHHHHHHHHHHHHHHHHHhh-hHHHHHhhhccccccHHHHH
Confidence 1112333444555666666544433 33334445566789998875
No 28
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.97 E-value=1.8e-28 Score=239.04 Aligned_cols=324 Identities=14% Similarity=0.139 Sum_probs=236.2
Q ss_pred hHHHHHHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHH
Q 011781 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (477)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 191 (477)
+|.....+++..+... .....++.+|.+.+++|+|..+.|++.+.+.+++.+++++.|+++||+|||+++..+.+++++
T Consensus 8 ~~~~~~~~~~~~~~~~-~~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~ 86 (393)
T PRK09705 8 NFMLLVLVLIGLNMRP-LLTSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAV 86 (393)
T ss_pred HHHHHHHHHHHHHcch-hhhccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHH
Confidence 3444444444433332 236677889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhccc-ChhH
Q 011781 192 ATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL-GWES 270 (477)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~-g~~~ 270 (477)
+.++++ ++++++.+++.|++.|++.+...+....++.+++| ++|+++++++..+..+|..+|+.+++++.++. +||+
T Consensus 87 ~~~~~~-~a~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~ 164 (393)
T PRK09705 87 GALMRE-LYPQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQ 164 (393)
T ss_pred HHHHHH-HCcchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH
Confidence 998885 67778899999999999999999999999999997 88999999999999999999999999988875 8999
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHHHHHHhHH
Q 011781 271 VFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSW 350 (477)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 350 (477)
.+.+.++..++..+..+...+++++++++ ++ ...++.+++++.|...+..++...
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-----------------------~~~~~~l~~~~~~~l~~~~~~~~~ 219 (393)
T PRK09705 165 TLAWWALPAVVALFAWWWQSAREVASSHK--TT-----------------------TTPVRVVFTPRAWTLGVYFGLING 219 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCccccC--CC-----------------------cCCcccccCHhHHHHHHHHHHHHH
Confidence 88876666554443333332222111000 00 001244567888877777777777
Q ss_pred HHHHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhhhHHHHhhhcc
Q 011781 351 GHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSI 430 (477)
Q Consensus 351 ~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~~~~l~~~ 430 (477)
.+.....++|.|+++ +|.+..+++...+..+++.++++++.+++.||+++| +..... ..+.++.......
T Consensus 220 ~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~--------~~~~~~-~~l~~~~~~~~~~ 289 (393)
T PRK09705 220 GYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRR--------KLLMLA-LVLQLVGFCGFIW 289 (393)
T ss_pred HHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccch--------HHHHHH-HHHHHHHHHHHHH
Confidence 888899999999987 799999999999999999999999999999999876 333322 2222222222211
Q ss_pred cCCCchHHHHHHHHHHHHhhhhhhhhhhHhhhccC-ccchhhhhhh
Q 011781 431 DLGLPHWEIVGILTAGLALSSFALSGLYCTHQDIS-PEYASILLYL 475 (477)
Q Consensus 431 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-p~~~g~~~gl 475 (477)
...+.... ..++.|.+.+...+.......+..+ ++++|+++|+
T Consensus 290 ~~~~~~~~--~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~ 333 (393)
T PRK09705 290 LPLQLPVL--WAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAF 333 (393)
T ss_pred ccchHHHH--HHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHH
Confidence 11222222 2233455544444444334455554 4568888875
No 29
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.97 E-value=1.9e-28 Score=243.52 Aligned_cols=285 Identities=16% Similarity=0.238 Sum_probs=209.1
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHH
Q 011781 113 YKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLA 192 (477)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 192 (477)
|..+...++...........+....|.+.++ |++..+.|++.+.+.+++.+++++.|+++||+|||++++.+.++.+++
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~ 106 (452)
T PRK11273 28 WQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAV 106 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHH
Confidence 3444444455555555556677788888887 999999999999999999999999999999999999999999888888
Q ss_pred HHHHHHhh---chHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHH-HHHhhhHHhhcccCh
Q 011781 193 TALLPLLA---GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSV-AGLLLAPPIIENLGW 268 (477)
Q Consensus 193 ~~~~~~~~---~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~-ig~~~~~~l~~~~g~ 268 (477)
.+++.... .+++.+++.|++.|++.+...+.....+.+++|+++|++++++++.+..+|.. ++|+++..+....+|
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw 186 (452)
T PRK11273 107 MLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDW 186 (452)
T ss_pred HHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccH
Confidence 77665332 35677889999999999988888888999999999999999999999998864 555554444344599
Q ss_pred hHHHHHHHHHHHHHHH-HHHHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCC-CCC-HHHHhhcHHHHHHHHHH
Q 011781 269 ESVFYIFGLLGIAWFS-GFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLK-DVP-WKAIFRSKAVWAMIYAH 345 (477)
Q Consensus 269 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~l~~ 345 (477)
|+.|++.+++.++..+ ..++++++++.......++.+. ...+.. .+..+++.. +.. .+.+++++.+|...+..
T Consensus 187 ~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 262 (452)
T PRK11273 187 HAALYMPAFAAILVALFAFAMMRDTPQSCGLPPIEEYKN-DYPDDY---NEKHEQELTAKQIFMQYVLPNKLLWYIAIAN 262 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCChhhhhh-cccccc---ccccCCCccHHHHHHHHHHcChHHHHHHHHH
Confidence 9999998887766544 4444554433211110000000 000000 000000000 011 13467899999988888
Q ss_pred HHhHHHHHHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhc
Q 011781 346 FCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIAT 402 (477)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~ 402 (477)
++.....+....++|.|+++..|++..+++.+.....++.+++.++.|+++||++++
T Consensus 263 ~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~ 319 (452)
T PRK11273 263 VFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRG 319 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 888888888899999999988899999999988899999999999999999999643
No 30
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.97 E-value=3e-28 Score=244.30 Aligned_cols=343 Identities=18% Similarity=0.141 Sum_probs=229.0
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcch-hhH-----HHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHH
Q 011781 113 YKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSV-AGL-----VQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGV 186 (477)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~-~g~-----~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~ 186 (477)
++.+....++.++..++...++...|.+.++++.+... .++ +.++..++..++++++|+++||+|||+++.++.
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~ 94 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITI 94 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 35666777888899999999999999999998644322 122 246777899999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhchHH--------HHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhh
Q 011781 187 LIWSLATALLPLLAGFMP--------GLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLL 258 (477)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~--------~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~ 258 (477)
++++++.++++ +++++. .++++|+++|++.+..++...+++.|++|+++||++.++...+..+|..+|+.+
T Consensus 95 ~l~~i~~~~~a-~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~ 173 (490)
T PRK10642 95 VIMSISTFCIG-LIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGV 173 (490)
T ss_pred HHHHHHHHHHH-hcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 99999998886 555554 378999999999999999999999999999999999999998888888888866
Q ss_pred hHHhh--------cccChhHHHHHHHHHHHHHHHHHHHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHH
Q 011781 259 APPII--------ENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWK 330 (477)
Q Consensus 259 ~~~l~--------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (477)
...+. ..+|||+.|++.+++.++..++...++|++...... +.. ++. ..+. ..+.++.+++
T Consensus 174 ~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~~~~~~~~esp~~~~~~-----~~~--~~~---~~~~-~~~~~~~~~~ 242 (490)
T PRK10642 174 VVLISTIVGEANFLDWGWRIPFFIALPLGIIGLYLRHALEETPAFQQHV-----DKL--EQG---DREG-LQDGPKVSFK 242 (490)
T ss_pred HHHHHHhcCHHHhcCccHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHH-----Hhh--hhh---cccc-ccccccCCHH
Confidence 65443 257999999997765555444433444432211000 000 000 0000 0011223466
Q ss_pred HHhhc-HHHHHH-HHHHHHhHHHHHHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccce
Q 011781 331 AIFRS-KAVWAM-IYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTM 408 (477)
Q Consensus 331 ~~~~~-~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~ 408 (477)
+++++ ++.+.. ....++....++.+..++|.|+++.+|++....++......++.+++.++.|+++||+|+|
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr------ 316 (490)
T PRK10642 243 EIATKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRR------ 316 (490)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH------
Confidence 66653 233322 2333445567778888999999877899988888888888889999999999999999987
Q ss_pred ehhhhhHHhhhhhHHHHh-hhcccCCCchHHHHHHHHHHHHhhhhhhhhhhHhhhccCccchhhhhhh
Q 011781 409 VRKICQTIAFLSPAVCMT-LSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLYL 475 (477)
Q Consensus 409 ~r~~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~g~~~gl 475 (477)
+.+...........+. +......+.....+..++.+++.+..............+++.||+++|+
T Consensus 317 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~ 382 (490)
T PRK10642 317 --PFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAA 382 (490)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHH
Confidence 3333222211211111 1111122222333334444444333332233333445667779988875
No 31
>PRK10504 putative transporter; Provisional
Probab=99.97 E-value=7.2e-28 Score=241.17 Aligned_cols=351 Identities=20% Similarity=0.219 Sum_probs=254.8
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHH
Q 011781 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLAT 193 (477)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 193 (477)
+.+..++++.++...+...+.+..|.+.+++|.+..+.+++.+.+.++..++.+++|+++||+|||++++.+.++.+++.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~ 89 (471)
T PRK10504 10 WQLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGS 89 (471)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHH
Confidence 34556677778888888889999999999999999999999999999999999999999999999999999988888887
Q ss_pred HHHHHhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHH
Q 011781 194 ALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFY 273 (477)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~ 273 (477)
+++. ..++++.+++.|+++|++.+...+....++.+++|+++|++++++......+|..+||.+++.+.++.|||+.|+
T Consensus 90 ~~~~-~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~ 168 (471)
T PRK10504 90 LFCA-LSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFL 168 (471)
T ss_pred HHHH-HhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHH
Confidence 7764 567778899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhccCCcCCCCCCCCcchhh-------------hhhh--hhh-----------------hhHHhhc
Q 011781 274 IFGLLGIAWFSGFKILQEGETSNGATLAPRSNYI-------------NMKK--SLS-----------------ASLEEMG 321 (477)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~--~~~-----------------~~~~~~~ 321 (477)
+...+..+..+......++.+....+. +..... ...+ ... ...++.+
T Consensus 169 ~~~~~~~l~~~~~~~~~~~~~~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (471)
T PRK10504 169 INIPVGIIGAIATLMLMPNYTMQTRRF-DLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARN 247 (471)
T ss_pred HHHHHHHHHHHHHHHhCCCccccCCCC-ChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhc
Confidence 988776665554444433222111111 100000 0000 000 0001111
Q ss_pred cCCCCCCHHHHhhcHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHh
Q 011781 322 ESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIA 401 (477)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~ 401 (477)
......+. ++++||.++...+..++..........+.|.|++..+|.++...++......++.+++.++.+++.||+|+
T Consensus 248 ~~~~~~~~-~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~ 326 (471)
T PRK10504 248 NNRALFSL-KLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGY 326 (471)
T ss_pred CCCCccCH-HHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc
Confidence 11122233 57899999988888888887777777888999987789999999999988888899999999999999987
Q ss_pred cCcccceehhhhhHHhhhhhHHHHhhhcccCCCchH-HHHHHHHHHHHhhhhhhhhhhHhhhccCccchhhhhhh
Q 011781 402 TGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHW-EIVGILTAGLALSSFALSGLYCTHQDISPEYASILLYL 475 (477)
Q Consensus 402 ~~~~~~~~r~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~g~~~gl 475 (477)
| +.......+.......+.........+ ..+..++.|.+.+...........+.++++.+|+++|+
T Consensus 327 ~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 393 (471)
T PRK10504 327 R--------RVLVATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSL 393 (471)
T ss_pred h--------HHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHH
Confidence 6 444333333333333332222222222 23334445555454444444445556677778888775
No 32
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.97 E-value=2.4e-28 Score=237.61 Aligned_cols=262 Identities=16% Similarity=0.261 Sum_probs=216.0
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHH
Q 011781 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLAT 193 (477)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 193 (477)
+.+..+....+..........+.+|.+.+++|.+..+.|++.+.+.+++.++++++|++.||+|||+++..+.++.+++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 82 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGN 82 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHH
Confidence 34456666777788888889999999999999999999999999999999999999999999999999999999999888
Q ss_pred HHHHHhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHH
Q 011781 194 ALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFY 273 (477)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~ 273 (477)
++++ .+++++.+++.|++.|++.+...+....++.+++++++|++++++...+..+|..++|.+++++.+..+||+.|+
T Consensus 83 ~l~~-~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~ 161 (382)
T PRK10091 83 AMFT-LSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFL 161 (382)
T ss_pred HHHH-HhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHH
Confidence 8774 677889999999999999998888888999999998899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH-HhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHHHHHHhHHHH
Q 011781 274 IFGLLGIAWFSGFK-ILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGH 352 (477)
Q Consensus 274 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 352 (477)
+.+++.++..+..+ .+|+.+++ .+ .+. ++ ..+.++++..|...+..++.....
T Consensus 162 ~~~~~~~~~~~~~~~~lp~~~~~--~~--~~~-----~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~ 215 (382)
T PRK10091 162 LIAVFNIAVLASIYFWVPDIRDE--AK--GGL-----RE-----------------QFHFLRSPAPWLIFAATMFGNAGV 215 (382)
T ss_pred HHHHHHHHHHHHHHHhCCCCCcc--cc--cCH-----HH-----------------HHHHhcChHHHHHHHHHHHHHHHH
Confidence 99887766554433 34432211 00 000 00 024466777777666555555555
Q ss_pred HHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhc
Q 011781 353 YTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIAT 402 (477)
Q Consensus 353 ~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~ 402 (477)
.....+++.|+.+.+|+++.+.+++....+++.++++++.+++.||++++
T Consensus 216 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~ 265 (382)
T PRK10091 216 FAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPL 265 (382)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCch
Confidence 55667778888777899999999999999999999999999999999876
No 33
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.97 E-value=1.5e-27 Score=233.20 Aligned_cols=331 Identities=17% Similarity=0.148 Sum_probs=243.3
Q ss_pred hHHHHHHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHH
Q 011781 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (477)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 191 (477)
.++.+.......++..+....+.+.+|.+.+++|.++.+.+++.+++.++..++++++|+++||+|||+.+..+.++..+
T Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~ 85 (394)
T PRK11652 6 NVNLLFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFIL 85 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHH
Confidence 45666666666666677778888889999999999999999999999999999999999999999999999999888888
Q ss_pred HHHHHHHhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHH
Q 011781 192 ATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESV 271 (477)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~ 271 (477)
+.++.. ..++++.+++.|++.|++.+...+....+..+.++++++++++++.+.+..++..++|.+++.+.+..|||+.
T Consensus 86 ~~~~~~-~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~ 164 (394)
T PRK11652 86 GTLVAL-FAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRAC 164 (394)
T ss_pred HHHHHH-HHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHH
Confidence 877764 5677889999999999998888888888999999989999999999999999999999999999998999999
Q ss_pred HHHHHHHHHHHHHHH-HHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHHHHHHhHH
Q 011781 272 FYIFGLLGIAWFSGF-KILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSW 350 (477)
Q Consensus 272 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 350 (477)
|++.+++.++..+.. ++.+|+++.+++ +.+ . ...++..+++|.++...+..+....
T Consensus 165 f~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~---~----------------~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (394)
T PRK11652 165 YLFLLLLGAGVTFSMARWMPETRPADAR----RTR---V----------------LASYRTLLSNRRFNCYLLMLIGTLA 221 (394)
T ss_pred HHHHHHHHHHHHHHHHHhCCccCccccc----hhH---H----------------HHHHHHHHcChHHHHHHHHHHHHHH
Confidence 999887766554433 344443221110 000 0 1124577888888876666666565
Q ss_pred HHHHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhhhHHHHhhhcc
Q 011781 351 GHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSI 430 (477)
Q Consensus 351 ~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~~~~l~~~ 430 (477)
....+..+.+.++++.+|.++.+.+++.....++.+++..+.+++.||++++ ............+.+.....
T Consensus 222 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~--------~~~~~~~~~~~~~~~~~~~~ 293 (394)
T PRK11652 222 GIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTL--------MWQSVICCLLAGLLMWIPGW 293 (394)
T ss_pred HHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHH
Confidence 6666677788899888899999999988888888888999999999998733 22222222222222222211
Q ss_pred c-CCCchHHHHHHHHHHHHhhhhhhhhhhHhhhccCccchhhhhhh
Q 011781 431 D-LGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLYL 475 (477)
Q Consensus 431 ~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~g~~~gl 475 (477)
. ..+.........+.+.+.+. ..+.......+..|+++|++.++
T Consensus 294 ~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~g~~~~~ 338 (394)
T PRK11652 294 FGVMNVWTLLVPAALFFFGAGM-LFPLATSGAMEPFPYLAGTAGAL 338 (394)
T ss_pred hccccHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhccccchHHHHH
Confidence 1 11222333344455555443 34555555556667788888765
No 34
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.97 E-value=7.1e-28 Score=232.92 Aligned_cols=261 Identities=13% Similarity=0.119 Sum_probs=207.0
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHhHHhhhh-hhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHH
Q 011781 113 YKLIGTTSLAFVICNMDKVNLSVAIIPMSH-RFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (477)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 191 (477)
++.+....++.++.+.....+++..+.+.+ ++|+|.+|.+++.+++.+++.++.++.|++.||+|.|+++.++.++.++
T Consensus 33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i 112 (462)
T PRK15034 33 RRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILII 112 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHH
Confidence 456777778888888999999999888766 8999999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHh----hchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhh----
Q 011781 192 ATALLPLL----AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPII---- 263 (477)
Q Consensus 192 ~~~~~~~~----~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~---- 263 (477)
..+..++. .++++.+++.|++.|++ +..++.....+++++|+++||+++|+.....++|..++++++..+.
T Consensus 113 ~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l 191 (462)
T PRK15034 113 PCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPV 191 (462)
T ss_pred HHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 88777542 16789999999999998 7788999999999999999999999997777777766655554432
Q ss_pred -c-------------ccChhHHHHHHHHHHHHHHHHHHHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCH
Q 011781 264 -E-------------NLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPW 329 (477)
Q Consensus 264 -~-------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (477)
+ ..+|+.++++.+++.++..+..++..++.+..+. .. ...
T Consensus 192 ~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~~~~---~~-----------------------~~~ 245 (462)
T PRK15034 192 FAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIASSRA---SI-----------------------ADQ 245 (462)
T ss_pred HHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccc---CH-----------------------HHH
Confidence 2 2347888888877777666665555443321110 00 113
Q ss_pred HHHhhcHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhc
Q 011781 330 KAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIAT 402 (477)
Q Consensus 330 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~ 402 (477)
...+|+|+.|.+.+..++.+..+.++..++|.|+++.+ +............+...++++++|+++||+|++
T Consensus 246 ~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~--~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~ 316 (462)
T PRK15034 246 LPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQF--PDVNILRLAFFGPFIGAIARSVGGAISDKFGGV 316 (462)
T ss_pred HHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc--ChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCch
Confidence 57899999999999999988888889899999998754 333333334445677888999999999999987
No 35
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.97 E-value=2.8e-28 Score=224.59 Aligned_cols=333 Identities=19% Similarity=0.224 Sum_probs=258.9
Q ss_pred hHHHHHHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHH
Q 011781 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (477)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 191 (477)
+++.+....++....+..+..+++..+.+.+++|+|+.|.+++.++..+...+..++.|.+.||+|.|++..++.++..+
T Consensus 12 ~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~I 91 (417)
T COG2223 12 ARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLI 91 (417)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHH
Confidence 45667777777788888899999999999999999999999999999999999999999999999999999999998888
Q ss_pred HHHHHHHhhc--hHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccC--
Q 011781 192 ATALLPLLAG--FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG-- 267 (477)
Q Consensus 192 ~~~~~~~~~~--~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g-- 267 (477)
..+...+... +++.+++++++.|++ |..+......++.++||+++|.++|++. ..++|..+..+++..+....|
T Consensus 92 P~~~~~~a~~~~~~~~ll~~gll~G~~-GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~ 169 (417)
T COG2223 92 PCLGLAFAVTYPSTWQLLVIGLLLGLA-GASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFL 169 (417)
T ss_pred HHHHHHHHccCCchHHHHHHHHHHhcc-cceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhH
Confidence 8777654332 235899999999998 5566888999999999999999999999 999999999999999998888
Q ss_pred -hhHHHHHHHHHHHHHHHHHHHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHHHHH
Q 011781 268 -WESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHF 346 (477)
Q Consensus 268 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 346 (477)
|+.+..+..+..++..+..++..++.++.+...++.. ...++.+.++++.|.+++..+
T Consensus 170 ~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~---------------------~~~~~~v~~~~~~W~lsllY~ 228 (417)
T COG2223 170 AWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQL---------------------PAQLKAVFSNKDTWLLSLLYF 228 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccc---------------------hhHHHHHhcCcchHHHHHHHH
Confidence 9999999888888766666655554433211111110 012467888999999999999
Q ss_pred HhHHHHHHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhhhHHHHh
Q 011781 347 CGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMT 426 (477)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~~~~ 426 (477)
....++.++..++|.|+++++|.++..+|.......+.+.+.+.++|+++||+|.+ +.+......+......
T Consensus 229 ~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~--------rv~~~~f~~~~~~~~~ 300 (417)
T COG2223 229 ATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGR--------RVTLAVFVGMALAAAL 300 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccch--------hHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999987 3333322222222222
Q ss_pred hhcccC----CCchHHHHHHHHHHHHhhhhhhhhhhHhhhccCccchhhhhhh
Q 011781 427 LSSIDL----GLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLYL 475 (477)
Q Consensus 427 l~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~g~~~gl 475 (477)
+..... ..+.+..++.++.-..+.+.......-....+.|++.|.+.|+
T Consensus 301 l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~~~G~v~G~ 353 (417)
T COG2223 301 LSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPKETGAVTGI 353 (417)
T ss_pred HHccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHHhhhhHHHHH
Confidence 222211 1223333333333333355555556666666677788888876
No 36
>PRK10133 L-fucose transporter; Provisional
Probab=99.97 E-value=2.5e-27 Score=233.39 Aligned_cols=332 Identities=14% Similarity=0.147 Sum_probs=238.4
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHH
Q 011781 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLAT 193 (477)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 193 (477)
..+..+.+.++...+.........|.+.+++|+++.+.|+..+.+.+++.+++++.|+++||+|||+++..+.++++++.
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~ 105 (438)
T PRK10133 26 IPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGA 105 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 44556667777888888889999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHH--HhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhc-c-----
Q 011781 194 ALLP--LLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE-N----- 265 (477)
Q Consensus 194 ~~~~--~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~-~----- 265 (477)
+++. ..+++++.++++|+++|++.+...+..+.++.+..++++|.+.+++.+....+|..+||.+++.+.. .
T Consensus 106 ~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~ 185 (438)
T PRK10133 106 ALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQS 185 (438)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc
Confidence 7652 3467788999999999999999999999999998776767778999999999999999999876541 0
Q ss_pred --------------------cChhHHHHHHHHHHHHHHHHHHHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCC
Q 011781 266 --------------------LGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLK 325 (477)
Q Consensus 266 --------------------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (477)
.+||++|+....+..+..++..+.+.++.+.++. .+. + ....
T Consensus 186 ~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~~~-~~~-~----------------~~~~ 247 (438)
T PRK10133 186 QDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNH-SDA-K----------------QGSF 247 (438)
T ss_pred hhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccc-ccc-c----------------ccch
Confidence 2466666544433332222222222221111000 000 0 0000
Q ss_pred CCCHHHHhhcHHHHHHHHHHHHhHHHHHHHhhhhhHHH-HHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCc
Q 011781 326 DVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYF-SEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGV 404 (477)
Q Consensus 326 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~ 404 (477)
...+++++++|.++...+..++....+.+...|.+.|+ ++.+|+++..++..+....++.++++++.+++.||+++|
T Consensus 248 ~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~-- 325 (438)
T PRK10133 248 SASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPH-- 325 (438)
T ss_pred hhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHH--
Confidence 11246788999988877777777788887888999885 556899999999999999999999999999999999887
Q ss_pred ccceehhhhhHHhhhhhHHHHhhhcccCCCchHHHHHHHHHHHHhhhhhhhhhhHhhhccCccchhhhhhh
Q 011781 405 ETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLYL 475 (477)
Q Consensus 405 ~~~~~r~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~g~~~gl 475 (477)
+.......+. +..+++..... . .+....+.+.|++.+...+. ......+..|++.+++.|+
T Consensus 326 ------~~l~~~~~~~-~~~~~~~~~~~-~-~~~~~~~~l~glg~~~i~P~-~~s~a~~~~~~~~~~as~l 386 (438)
T PRK10133 326 ------KVLAAYALIA-MALCLISAFAG-G-HVGLIALTLCSAFMSIQYPT-IFSLGIKNLGQDTKYGSSF 386 (438)
T ss_pred ------HHHHHHHHHH-HHHHHHHHHcC-C-hHHHHHHHHHHHHHHHHHHH-HHHHHHcccchhhccchhH
Confidence 3333333222 22222222211 2 23344566677776666544 4444455455666666654
No 37
>PRK15075 citrate-proton symporter; Provisional
Probab=99.97 E-value=2.2e-27 Score=234.74 Aligned_cols=334 Identities=13% Similarity=0.086 Sum_probs=223.7
Q ss_pred hHHHHHHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHH-HHH-----HHHHHHhhhhhhhhhhhhcChhHHHHH
Q 011781 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQ-SSF-----FWGYALSQLPGGWLAKIFGGRKVLQTG 185 (477)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~-~~~-----~~~~~~~~~~~g~l~dr~g~r~~~~~~ 185 (477)
|++....++++.++..++...++...|.+.++++.++.+.+.+. +.. .++..+++++.|+++||+|||+.++.+
T Consensus 13 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~ 92 (434)
T PRK15075 13 KARAILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVT 92 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHH
Confidence 44677788889999999999999999999999999887765443 222 222246889999999999999999999
Q ss_pred HHHHHHHHHHHHHhhchHH--------HHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHh
Q 011781 186 VLIWSLATALLPLLAGFMP--------GLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLL 257 (477)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~ 257 (477)
.++++++.++++ ++++++ .+++.|++.|++.+...+....++.|++|+++|++++++.....++|..+++.
T Consensus 93 ~~~~~~~~~l~~-~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~ 171 (434)
T PRK15075 93 LSIMASGTLLIA-FVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAAL 171 (434)
T ss_pred HHHHHHHHHHHH-hCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHH
Confidence 999999888886 455544 46889999999999999999999999999999999999999998888888888
Q ss_pred hhHHhh--------cccChhHHHHHHHHHHHHHHHHHHHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCH
Q 011781 258 LAPPII--------ENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPW 329 (477)
Q Consensus 258 ~~~~l~--------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (477)
+++.+. +.+|||++|++..+...+. ++.++..++.. +....+ ++...+..+
T Consensus 172 ~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~~~~----~~~~~~~~e~~-------~~~~~~----------~~~~~~~~~ 230 (434)
T PRK15075 172 LGYLLNQWLSPAQMAEWGWRIPFLIGCLIVPFI----FLIRRSLEETE-------EFLARK----------HRPSMREIF 230 (434)
T ss_pred HHHHHHHhCCHHHHhccchHHHHHHHHHHHHHH----HHHHHhcCCCH-------HHHHhh----------hccccccHH
Confidence 877663 4679999998754432221 12221111100 000000 000001113
Q ss_pred HHHhhcHHHHHHH-HHHHHhHHHHHHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccce
Q 011781 330 KAIFRSKAVWAMI-YAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTM 408 (477)
Q Consensus 330 ~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~ 408 (477)
+...+++..+... +..++....+.....|.|.|+++.+|++..+.++......++.+++.++.|+++||+|+|
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r------ 304 (434)
T PRK15075 231 RSLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRR------ 304 (434)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcch------
Confidence 3445555555443 333444556677888999999988899999999888888999999999999999999876
Q ss_pred ehhhhhHHhhhhhHHHH-hh-hcccCCCchHHHHHHHHHHHHhhhhhhhhhhHhhhccCccchhhhhhh
Q 011781 409 VRKICQTIAFLSPAVCM-TL-SSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLYL 475 (477)
Q Consensus 409 ~r~~~~~~~~~~~~~~~-~l-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~g~~~gl 475 (477)
+.............+ .+ ...............++.+.+.+...........+..+++.||+.+|+
T Consensus 305 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~ 371 (434)
T PRK15075 305 --PVLIAFTVLAILTAYPALSWLVAAPSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSL 371 (434)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeH
Confidence 333322222111111 11 111112211222223334444433332233334455667779998876
No 38
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.97 E-value=1.4e-27 Score=233.78 Aligned_cols=334 Identities=13% Similarity=0.100 Sum_probs=235.2
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHH
Q 011781 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLAT 193 (477)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 193 (477)
+.+....++.++..........+++.+.+++|.++.+.|++.+.+.++..+++++.|++.||+|||+++..+.++.+++.
T Consensus 13 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~ 92 (402)
T TIGR00897 13 LNLLWGYIGVVVFMTGDGLEQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGH 92 (402)
T ss_pred chhhHHHHHHHHHHHhhhhHHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 34445555555666666666667777778999999999999999999999999999999999999999999988888776
Q ss_pred HHHHH--h-hchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHH-HHHHhhhHHhhcccChh
Q 011781 194 ALLPL--L-AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGS-VAGLLLAPPIIENLGWE 269 (477)
Q Consensus 194 ~~~~~--~-~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~-~ig~~~~~~l~~~~g~~ 269 (477)
+++.. . .++++.+++.|++.|++.+...+.....+.+.+|+++|++++|+.+...++|. +++|.+++.+.+.+||+
T Consensus 93 ~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~ 172 (402)
T TIGR00897 93 AAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEM 172 (402)
T ss_pred HHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchH
Confidence 54421 2 34677888999999999888888888889999999999999999999999996 68999999999888977
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHHHHHHhH
Q 011781 270 SVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGS 349 (477)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 349 (477)
..++......++..++.+++.+++++++.. +++++. .+ ....++.++++|.+|...+..++..
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-------~~---------~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (402)
T TIGR00897 173 NTLWSALAFVLTGGVIALFSNKDIFTPQHM-QTREKF-------SE---------LGKAATILFTNPNVLLGGMVRIINT 235 (402)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCCCcccc-cCCcch-------hh---------HHHHHHHHHcChhHHHHHHHHHHHH
Confidence 666654443333333333332222111110 000000 00 0012457889999998888888877
Q ss_pred HHHHHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhh-hhH--HHHh
Q 011781 350 WGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFL-SPA--VCMT 426 (477)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~-~~~--~~~~ 426 (477)
...+++.++.|.|+++ +|++..+.+.+.+...++..++.++.|+++||+++| +.......+ ... .++.
T Consensus 236 ~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~--------~~~~~~~~l~~~~~~~~l~ 306 (402)
T TIGR00897 236 IGLFGFAVFLPMFVAE-LGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWM--------NTVRWFGGVGCGIFTLALY 306 (402)
T ss_pred HHHHHHHHHHHHHHHH-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcch--------hHHHHHHHHHHHHHHHHHH
Confidence 8888889999999865 899999999998999999999999999999999876 222111111 111 1111
Q ss_pred hhcc-cCCCchHHHHHHHHHHHHhhhhhhhhhhHhhhccCccchhhhhhh
Q 011781 427 LSSI-DLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLYL 475 (477)
Q Consensus 427 l~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~g~~~gl 475 (477)
.... ..++.....+..++.|.+.+... +. .....+..|+++|+++|+
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~-~~-~~~~~~~~~~~~g~~~g~ 354 (402)
T TIGR00897 307 YIPQHFGHSFAVALIIAIALGIFLAGYV-PL-AAVFPTLAPKHKGAAMSV 354 (402)
T ss_pred HHHHccCCcHHHHHHHHHHHHHHHHHHH-HH-HHHHHhhCcchhHHHHHH
Confidence 1111 11222333445556666655442 33 345566788899999986
No 39
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.97 E-value=1.5e-27 Score=232.01 Aligned_cols=255 Identities=20% Similarity=0.272 Sum_probs=212.0
Q ss_pred hhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhchHHHHH
Q 011781 128 MDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLV 207 (477)
Q Consensus 128 ~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (477)
+...++.+.+|.+.+++|+++.+.+++.+++.++..++.+++|+++||+|||+++..+.++.+++.+++. ..++++.++
T Consensus 5 ~~~~~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~ 83 (377)
T PRK11102 5 LAIDMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACA-LAQTIDQLI 83 (377)
T ss_pred hHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHH-HHccHHHHH
Confidence 4566777889999999999999999999999999999999999999999999999999998888887775 567778899
Q ss_pred HHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHHHHHHHHHHHHHHHH
Q 011781 208 LSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFK 287 (477)
Q Consensus 208 ~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 287 (477)
+.|++.|++.+...+...+++.+++|+++|++++++.+....+|..++|.+++.+.+..+||+.|++.+++.++..+...
T Consensus 84 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (377)
T PRK11102 84 YMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVF 163 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999989999999998887776654443
Q ss_pred -HhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHh
Q 011781 288 -ILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEE 366 (477)
Q Consensus 288 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 366 (477)
+.+++++++++++ .+ . ++ . ..++++.+++|.++...+..++.......+..+.|.++.+.
T Consensus 164 ~~~~~~~~~~~~~~-~~--~---~~----~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (377)
T PRK11102 164 FFIPETLPKERRQP-FH--L---RT----T---------IRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIEL 224 (377)
T ss_pred HhCCccCcccccCC-CC--h---HH----H---------HHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHH
Confidence 4444322111100 00 0 00 0 01245678888888777777776666777778888888888
Q ss_pred hCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhc
Q 011781 367 LSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIAT 402 (477)
Q Consensus 367 ~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~ 402 (477)
+|+++.+.+.+.....++.+++.++.+++.||+|+|
T Consensus 225 ~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~ 260 (377)
T PRK11102 225 NGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGAL 260 (377)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH
Confidence 899999999999999999999999999999999887
No 40
>PRK11043 putative transporter; Provisional
Probab=99.96 E-value=3.4e-27 Score=231.37 Aligned_cols=325 Identities=12% Similarity=0.131 Sum_probs=238.2
Q ss_pred HHHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHH
Q 011781 116 IGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATAL 195 (477)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 195 (477)
+..+.+...+..+....+.+.+|.+.+++|.++.+.+++.+++.++..++++++|+++||+|||+.+..+.++..++.++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 87 (401)
T PRK11043 8 LVYLAGLSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLG 87 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHH
Confidence 33444445556667788888888899999999999999999999999999999999999999999999998888887777
Q ss_pred HHHhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHHHH
Q 011781 196 LPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIF 275 (477)
Q Consensus 196 ~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~~ 275 (477)
.. ..++++.+++.|++.|++.+...+...+++.++++++++++..+.......+|..++|.+++++.+..|||+.|++.
T Consensus 88 ~~-~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~ 166 (401)
T PRK11043 88 ML-WVESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATL 166 (401)
T ss_pred HH-HhcCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHH
Confidence 64 56777889999999999988888888899999999988999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHHHHHHhHHHHHHH
Q 011781 276 GLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTC 355 (477)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 355 (477)
+++.++..+..+++++++++++ +++ ++.++++++++|.++...+...+.......+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~----~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (401)
T PRK11043 167 FAITLLLILPTLRLKPSKKARK----QSQ--------------------DALTFKQLLKSKTYLGNVLIFAACSAAFFAW 222 (401)
T ss_pred HHHHHHHHHHHHHcCCCCCccc----cch--------------------HHHHHHHHHcChhHHHHHHHHHHHHHHHHHH
Confidence 8887776666555544332111 000 0112467788888877666555555666677
Q ss_pred hhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhH--HhhhhhHHHHhhh-cccC
Q 011781 356 LSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQT--IAFLSPAVCMTLS-SIDL 432 (477)
Q Consensus 356 ~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~--~~~~~~~~~~~l~-~~~~ 432 (477)
..+.|.++++ +|++..+.++......++.+++.++.+++.||++++ +.... ....+....+.+. ....
T Consensus 223 ~~~~p~~~~~-~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (401)
T PRK11043 223 LTGSPFILEQ-MGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGE--------QLLPWLLVLFAVSVIAIWLASLLSH 293 (401)
T ss_pred HHHhHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHH--------HHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 7888998865 799999999888888889999999999999999876 22111 1111111111111 1111
Q ss_pred CCchHHHHHHHHHHHHhhhhhhhhhhHhhhccCccchhhhhhh
Q 011781 433 GLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLYL 475 (477)
Q Consensus 433 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~g~~~gl 475 (477)
.......+...+.+.+.+... +.......+..|+++|+++|+
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~ 335 (401)
T PRK11043 294 PSLVPLLIPFCVMAAANGAIY-PIVVAQALRPFPQATGKAAAL 335 (401)
T ss_pred CcHHHHHHHHHHHHHHHHHHH-HHHHHHHhhhCcccChHHHHH
Confidence 222223333444555544444 333334444457789998876
No 41
>TIGR00895 2A0115 benzoate transport.
Probab=99.96 E-value=9.3e-28 Score=235.03 Aligned_cols=353 Identities=22% Similarity=0.251 Sum_probs=243.2
Q ss_pred hHHHHHHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHH
Q 011781 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (477)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 191 (477)
+++.+...++..+..........+..|.+.+++|.+..+.+++.++..++..++.++.|+++||+|||+.+..+.++.++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~ 94 (398)
T TIGR00895 15 QWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSV 94 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHH
Confidence 45556666666777777778888889999999999999999999999999999999999999999999999999888888
Q ss_pred HHHHHHHhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHH
Q 011781 192 ATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESV 271 (477)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~ 271 (477)
+.++.. ..++++.+++.+++.|++.+...+...+++.|++|+++|++++++......+|..+++.+++.+.+..||++.
T Consensus 95 ~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~ 173 (398)
T TIGR00895 95 FTLLCA-LATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSL 173 (398)
T ss_pred HHHHHH-HccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceee
Confidence 877764 5677788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH-HHHHhccCCcCCCCCCCCcchhh-hh-hhhhhhh-H-HhhccCC----CCCCHHHHhhc---HHHH
Q 011781 272 FYIFGLLGIAWFS-GFKILQEGETSNGATLAPRSNYI-NM-KKSLSAS-L-EEMGESL----KDVPWKAIFRS---KAVW 339 (477)
Q Consensus 272 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~-~-~~~~~~~----~~~~~~~~~~~---~~~~ 339 (477)
|++.+++.++..+ ...++++++....++..++.... +. ....... . +..+++. .+..++.++++ +..+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (398)
T TIGR00895 174 FYVGGIAPLLLLLLLMRFLPESIDFLVSKRPETVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQGKTARITV 253 (398)
T ss_pred hhhhhhHHHHHHHHHHHhCCCCChHHHhcCHHHHHHHHHHHHHhccccccccccccccccchhhHHHHHHhcchhHHHHH
Confidence 9998765555443 34444443321111100000000 00 0000000 0 0000000 01112222222 3334
Q ss_pred HHHHHHHHhHHHHHHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhh
Q 011781 340 AMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFL 419 (477)
Q Consensus 340 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~ 419 (477)
.+.+..++..........++|.+. +.+|.+..+.+.......++.+++.++.+++.||+++| +.. ....+
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--------~~~-~~~~~ 323 (398)
T TIGR00895 254 LLWLLYFMLLVGVYFLTNWLPKLM-VELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPR--------VTA-LLLLL 323 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchH--------HHH-HHHHH
Confidence 444455555666667778888555 55899999999999999999999999999999999765 222 22222
Q ss_pred hhHHHHhhhcccCCCchHHHHHHHHHHHHhhhhhhhhhhHhhhccCccchhhhhhhc
Q 011781 420 SPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLYLE 476 (477)
Q Consensus 420 ~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~g~~~gl~ 476 (477)
.......+.. ...+.....+..++.|.+.+...........+..+++++|+++|+.
T Consensus 324 ~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 379 (398)
T TIGR00895 324 GAVFAVLVGS-TLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWA 379 (398)
T ss_pred HHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHH
Confidence 2222222222 1223334455566667666655544444444455667799998863
No 42
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.96 E-value=1e-27 Score=237.42 Aligned_cols=287 Identities=16% Similarity=0.227 Sum_probs=213.4
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHH
Q 011781 113 YKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLA 192 (477)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 192 (477)
++.+..+.+...........+....|.+.+ +|+++.+.+++.+++.++..+++++.|+++||+|||+.+..+.++.+++
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~ 104 (438)
T TIGR00712 26 WQVFLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAV 104 (438)
T ss_pred HHHHHHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHH
Confidence 444555555666666666667777787775 5999999999999999999999999999999999999999998888887
Q ss_pred HHHHHHh---hchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhc-ccCh
Q 011781 193 TALLPLL---AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE-NLGW 268 (477)
Q Consensus 193 ~~~~~~~---~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~-~~g~ 268 (477)
.+++... .++++.+.+.|++.|++.+..++.....+.+++|+++|++++++.+....+|..+++.+.+...+ ..+|
T Consensus 105 ~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w 184 (438)
T TIGR00712 105 MLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDW 184 (438)
T ss_pred HHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhh
Confidence 7665432 24556778899999999999999999999999999999999999999999999999888776444 5799
Q ss_pred hHHHHHHHHHHHHHHHH-HHHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHHHHHH
Q 011781 269 ESVFYIFGLLGIAWFSG-FKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFC 347 (477)
Q Consensus 269 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 347 (477)
|+.|++.+++.++..+. .++++++++....+..++.+. +..+...+. ++.+.+.++...+.+++++.+|...+..++
T Consensus 185 ~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (438)
T TIGR00712 185 HAALYFPAICAIIVALFAFAMMRDTPQSCGLPPIEEYRN-DYPDDYNEK-AEQELTAKEIFMQYVLPNKLLWYIAIANVF 262 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCHHhcCCCCchhccc-ccccccccc-cccccchHHHHHHHHccCchHHHHHHHHHH
Confidence 99999988887775544 444444332211000000000 000000000 000000000111346789999998888777
Q ss_pred hHHHHHHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhc
Q 011781 348 GSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIAT 402 (477)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~ 402 (477)
.....+++.+++|.|+++..|+++.++++......++.+++.+++|++.||++++
T Consensus 263 ~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~ 317 (438)
T TIGR00712 263 VYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKG 317 (438)
T ss_pred HHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 7777788889999999988899999999999999999999999999999999765
No 43
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.96 E-value=1.9e-27 Score=235.87 Aligned_cols=356 Identities=15% Similarity=0.130 Sum_probs=244.1
Q ss_pred hHHHHHHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHH
Q 011781 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (477)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 191 (477)
+|.++...++...........++.+.+.+.+++|.+..+.+++.+.+.++..++.++.|+++||+|||++++.+.++.++
T Consensus 17 ~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~ 96 (455)
T TIGR00892 17 GWVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASL 96 (455)
T ss_pred chHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHH
Confidence 35555555555554455556677889999999999999999999999999999999999999999999999999888888
Q ss_pred HHHHHHHhhchHHHHHH-HHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhH
Q 011781 192 ATALLPLLAGFMPGLVL-SRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWES 270 (477)
Q Consensus 192 ~~~~~~~~~~~~~~~~~-~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~ 270 (477)
+.++++ .+++++.+++ .|++.|++.+...+....++.++++ ++|++++++.+.+..+|..++|.+++.+.+.+|||+
T Consensus 97 ~~~~~~-~~~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~ 174 (455)
T TIGR00892 97 GMILAS-FSSNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRG 174 (455)
T ss_pred HHHHHH-HhhhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHH
Confidence 877764 5566666654 5689999988777777888889986 789999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCcCCCCCCCCcchhhhhhhhhhh-hHHhhccCCCCCCHHHHhhcHHHHHHHHHHHHhH
Q 011781 271 VFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSA-SLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGS 349 (477)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 349 (477)
.|++.+++.++..+..+++.+.+..+.....+.++.........+ ..+...++..+....+++++|.++...+..++..
T Consensus 175 ~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 254 (455)
T TIGR00892 175 SFLILGGLLLHCCVCGALMRPVGPSQRVSKSKSKEGLPPDGSTKKLSKKSTAEKINRFLDFSLFTHRGFLVYLSGNVIMF 254 (455)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCcccccccccccccCCCCCccccccccchhhhhhhhcchHHhcCchHHHHHHHHHHHH
Confidence 999999887766555444433222110000000000000000000 0000000001111125788999998888877777
Q ss_pred HHHHHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhhhHHHHhhhc
Q 011781 350 WGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSS 429 (477)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~~~~l~~ 429 (477)
.+......++|.|+++ .|++..+++++.++.+++.++++++.+++.||...+. .+........+..++..++..
T Consensus 255 ~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~-----~~~~~~~~~~~~~~l~~ll~~ 328 (455)
T TIGR00892 255 LGFFAPIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRP-----HVQYLFSFALLFNGLTHLLCA 328 (455)
T ss_pred HHccchHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCH-----HHHHHHHHHHHHHHHHHHHHH
Confidence 7777888899999976 7999999999999999999999999999999742210 012222222222222222222
Q ss_pred ccCCCchHHHHHHHHHHHHhhhhhhhhhhHhhhccCccchhhhhhhc
Q 011781 430 IDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLYLE 476 (477)
Q Consensus 430 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~g~~~gl~ 476 (477)
. ..+...+++..++.|++.+...........+.++++++|+++|+.
T Consensus 329 ~-~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~ 374 (455)
T TIGR00892 329 L-AGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLV 374 (455)
T ss_pred H-hchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHH
Confidence 2 223334445566667765555554455555556777889988763
No 44
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.96 E-value=9.6e-27 Score=228.11 Aligned_cols=262 Identities=17% Similarity=0.209 Sum_probs=214.2
Q ss_pred HHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHH
Q 011781 117 GTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALL 196 (477)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 196 (477)
..+.+..+...+....+.+.+|.+.+++|.+..+.++..+++.+++.++++++|+++||+|||+++..+.++++++.+++
T Consensus 19 ~~~~~~~~~~~~~~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~ 98 (413)
T PRK15403 19 MALILYDFAAYLTTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAAT 98 (413)
T ss_pred HHHHHHHHHHHHHHHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHH
Confidence 33445555666788888999999999999999999999999999999999999999999999999999999988888777
Q ss_pred HHhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHHHHH
Q 011781 197 PLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFG 276 (477)
Q Consensus 197 ~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~~~ 276 (477)
. .+++++.++++|+++|++.+...+....++.|+++++++++++++......+|..+||.+++.+.+..|||+.|++.+
T Consensus 99 ~-~a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~ 177 (413)
T PRK15403 99 L-FTTSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIA 177 (413)
T ss_pred H-HcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 4 677888999999999999887777778889999999999999999999999999999999999998899999999998
Q ss_pred HHHHHHHHHH-HHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHHHHHHhHHHHHHH
Q 011781 277 LLGIAWFSGF-KILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTC 355 (477)
Q Consensus 277 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 355 (477)
++.++..+.. +.+++++++++++ .+. .. . ..+++.+++||.+|...+..++.......+
T Consensus 178 ~~~~i~~~~~~~~lp~~~~~~~~~-~~~------~~----~---------~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~ 237 (413)
T PRK15403 178 VMGLIAFVGLLLAMPETVKRGAVP-FSA------KS----V---------LRDFRNVFRNRLFLTGAATLSLSYIPMMSW 237 (413)
T ss_pred HHHHHHHHHHHHhCCCCccccCCC-CCh------HH----H---------HHHHHHHHcCHHHHHHHHHHHHHHHHHHHH
Confidence 8877765543 3345433211100 000 00 0 012568899999999888888877777888
Q ss_pred hhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHH
Q 011781 356 LSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNL 399 (477)
Q Consensus 356 ~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~ 399 (477)
..+.|.++++.+|+++.+.++.......+.+++..+.+++.+|.
T Consensus 238 ~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~ 281 (413)
T PRK15403 238 VAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDP 281 (413)
T ss_pred HHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 88899999988899999999988888888888877777765443
No 45
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.96 E-value=6.2e-27 Score=228.07 Aligned_cols=326 Identities=14% Similarity=0.074 Sum_probs=232.0
Q ss_pred HHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHH
Q 011781 118 TTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLP 197 (477)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~ 197 (477)
.++++.++..++...+....+.+.++++.++.+.+++.+.+.+++.++.+++|+++||+|||++++.+.++.+++.+++.
T Consensus 7 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~ 86 (393)
T PRK11195 7 AIMAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLML 86 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHH
Confidence 45666777777666677777777899999999999999999999999999999999999999999999998888776653
Q ss_pred HhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHHHHHH
Q 011781 198 LLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGL 277 (477)
Q Consensus 198 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~~~~ 277 (477)
...+ .++.|+++|++.+...|+..+++.|++|+++|++++|+.+....+|.++||.++|++.+. .|+..+.+.+.
T Consensus 87 -~~~~---~~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~ 161 (393)
T PRK11195 87 -FGIH---PLLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP-HAEAALAVCAL 161 (393)
T ss_pred -HHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 3333 277899999999999999999999999999999999999999999999999999999875 47777777666
Q ss_pred HHHHHHHHHHHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHHHHHHhHHHHHHHhh
Q 011781 278 LGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLS 357 (477)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 357 (477)
+.++..+..+.+++++.++++.+.+... ...+.. ..++.++++|.+....+..++..........
T Consensus 162 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~------~~~~~~---------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (393)
T PRK11195 162 IYLLAALFNLFIPRLGARRPGQSWNPIA------LLRDFF---------HACRVLWRDKLGRFSLAGTTLFWGAGATLRF 226 (393)
T ss_pred HHHHHHHHHhcCCCCcccccccCCCHHH------HHHHHH---------HHHHHHHhCchhHHHHHHHHHHHHHHHHHHH
Confidence 5555544455555543221111110000 000000 0135677888777665555555555566667
Q ss_pred hhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhhhHHHHhhhcccCCCchH
Q 011781 358 WLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHW 437 (477)
Q Consensus 358 ~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~~~~l~~~~~~~~~~ 437 (477)
.+|.|+++.+|.++.+.|++.+...++.+++.++.+++.||.+++ +... .+...+...+ .... .++.++
T Consensus 227 ~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~--------~~~~-~g~~~~~~~~-~~~~-~~~~~~ 295 (393)
T PRK11195 227 LVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVL--------RVLP-AGILMGLVVL-LMAL-QHSLLP 295 (393)
T ss_pred HHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCccc--------chHH-HHHHHHHHHH-HHHH-HhHHHH
Confidence 778888888999999999999999999999999999999887654 2222 2222222222 2222 122223
Q ss_pred HHHHHHHHHHHhhhhhhhhhhHhhhccCccc--hhhhhhh
Q 011781 438 EIVGILTAGLALSSFALSGLYCTHQDISPEY--ASILLYL 475 (477)
Q Consensus 438 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~--~g~~~gl 475 (477)
..+.+++.|.+.+....+ .....++.+|++ +|+++|+
T Consensus 296 ~~~~~~~~G~~~g~~~~~-~~~~~q~~~~~~~~~g~~~a~ 334 (393)
T PRK11195 296 AYPLLILIGALGGFFVVP-MNALLQHRGHVLVGAGHSIAV 334 (393)
T ss_pred HHHHHHHHHHhhhhhhhh-HHHHHHhhCcccccchhHHHH
Confidence 344455666665555544 445556667664 5877765
No 46
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.96 E-value=1.9e-26 Score=225.18 Aligned_cols=321 Identities=15% Similarity=0.160 Sum_probs=239.9
Q ss_pred HHHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHH
Q 011781 116 IGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATAL 195 (477)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 195 (477)
+..++...+..++......+..|.+++++|.+..+.|++.+.+.+++.+++++.|++.||+|||+++..+.++++++.++
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l 84 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFL 84 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHH
Confidence 44566677777788888899999999999999999999999999999999999999999999999999999998888876
Q ss_pred HHHh--hchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcc--------
Q 011781 196 LPLL--AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN-------- 265 (477)
Q Consensus 196 ~~~~--~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~-------- 265 (477)
+... .++++.+++.|++.|+|.+...+..+.++.+..|+++|++.+++.+...++|..+||.+++.+...
T Consensus 85 ~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~ 164 (410)
T TIGR00885 85 FWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQD 164 (410)
T ss_pred HHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhh
Confidence 5322 356788999999999999999999999999999999999999999999999999999999877522
Q ss_pred ------------------cChhHHHHHHHHHHHHHHHHHHHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCC
Q 011781 266 ------------------LGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDV 327 (477)
Q Consensus 266 ------------------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (477)
.+||++|++.+++.++..+...+.+.++.++. + +++. ....
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~p~~~~~-~-~~~~-------------------~~~~ 223 (410)
T TIGR00885 165 VLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKMPALNHS-D-AKQI-------------------SFSA 223 (410)
T ss_pred hhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc-c-cccc-------------------cchh
Confidence 36999999988877766554443332221110 0 0000 0011
Q ss_pred CHHHHhhcHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHhh-CCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCccc
Q 011781 328 PWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEEL-SLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVET 406 (477)
Q Consensus 328 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~ 406 (477)
+.++++|+|.++...+..+++...+.+..++++.|.++.. +.+....+...+....+..+|+++++++.||+++|
T Consensus 224 ~~~~~~~~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~---- 299 (410)
T TIGR00885 224 SLSRLARIRHYREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAH---- 299 (410)
T ss_pred hHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHH----
Confidence 2357789999999888888888888888999999997532 34444455566667788899999999999999776
Q ss_pred ceehhhhhHHhhhhhHHHHhhhcccCCCchHHHHHHHHHHHHhhhhhhhhhhHhhhccCccc
Q 011781 407 TMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEY 468 (477)
Q Consensus 407 ~~~r~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~ 468 (477)
+.+..........+++..... .......+.+.|++.+.+++.......+...++.
T Consensus 300 ----~~l~i~~~~~~~~~ll~~~~~---~~~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~ 354 (410)
T TIGR00885 300 ----KVLMAYAIIGMALCLGSIFAG---GHVGLYCLTLCSAFMSLMFPTIYGIALKGLGQDT 354 (410)
T ss_pred ----HHHHHHHHHHHHHHHHHHHcC---ChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 444444433333333333221 2334566777777777777544444444555444
No 47
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.96 E-value=4.6e-29 Score=231.36 Aligned_cols=352 Identities=16% Similarity=0.159 Sum_probs=263.1
Q ss_pred hHHHHHHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHH
Q 011781 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (477)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 191 (477)
.++.+.++++...++..+...+....+.+.+.+|++++..|++.+.+.+.+.+++|++|+++||++||+++.+|..++.+
T Consensus 31 ~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~ 110 (493)
T KOG1330|consen 31 PTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTL 110 (493)
T ss_pred chHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHH
Confidence 45678888899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccC-hhH
Q 011781 192 ATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG-WES 270 (477)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g-~~~ 270 (477)
+.+..+ +++.+|+++++|.+.|+|.+.+.|..+++++|.+|.++|++++++++.+..+|..+|.+.+..+.+..+ |||
T Consensus 111 Av~~~~-fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~ 189 (493)
T KOG1330|consen 111 AVFASG-FSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRW 189 (493)
T ss_pred HHHHHH-HHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEE
Confidence 999886 568889999999999999999999999999999999999999999999999999999999999988766 999
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHHHHHHhHH
Q 011781 271 VFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSW 350 (477)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 350 (477)
.|+..+++.++..++.+++.+++++...++.+.+..... +......+.+.+.+++.+....+......+
T Consensus 190 af~~~avl~vi~~~L~~~f~~eP~rga~~~~~~~~~~~~-----------~~ts~~kDl~~l~~~~v~v~~sl~~~a~~f 258 (493)
T KOG1330|consen 190 AFRGSAVLGVIVGLLVFLFVREPERGARDEVDGENKMVK-----------PFTSVWKDLKVLAKIKVFVLSSLGIIAAQF 258 (493)
T ss_pred EEEeehHHHHHHHHHHHhhccCcccccccccccCCcCCC-----------CccchHHHHHHHHccCceeeehHHHHHHHH
Confidence 999999999988777666655444332221111110000 000111234555666776666666666666
Q ss_pred HHHHHhhhhhHHHHH---hhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehh--hhhHHhhhhhHHHH
Q 011781 351 GHYTCLSWLPTYFSE---ELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRK--ICQTIAFLSPAVCM 425 (477)
Q Consensus 351 ~~~~~~~~~~~~~~~---~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~--~~~~~~~~~~~~~~ 425 (477)
...++..|.|.++.. ..|++.....++.++...++.+|.+++|.++||+.+...+....+- .....+....+.++
T Consensus 259 v~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L 338 (493)
T KOG1330|consen 259 VIGSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFL 338 (493)
T ss_pred hccccchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHH
Confidence 666666676766543 3345555666677788888999999999999998765433222222 22223333333333
Q ss_pred hhhcccCCCchHHHHHHHHHHHHhhhhhhhhhhHhhhc-cCccchhhhhhh
Q 011781 426 TLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQD-ISPEYASILLYL 475 (477)
Q Consensus 426 ~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~p~~~g~~~gl 475 (477)
.+.........+..+.++++|............-+..+ ++|++|.+++++
T Consensus 339 ~~~~~~~~~s~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~ 389 (493)
T KOG1330|consen 339 FLFPAFTSSSMIFGLILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYAL 389 (493)
T ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHhcccccccceeeEecCcccccHHHHH
Confidence 33333334455666677777777776666555544444 678889888764
No 48
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.96 E-value=1.1e-27 Score=235.96 Aligned_cols=327 Identities=13% Similarity=0.020 Sum_probs=235.3
Q ss_pred HHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHH
Q 011781 119 TSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPL 198 (477)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 198 (477)
+.+..++..+........+|.+.++++.++.+.|++.+.+.++..+++++.|+++||+|||+++..+.++.+++.+.+..
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~ 101 (417)
T PRK10489 22 VFIARFISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLAL 101 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHH
Confidence 34445566677788888899999999999999999999999999999999999999999999998887776666554321
Q ss_pred ----hhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHHH
Q 011781 199 ----LAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYI 274 (477)
Q Consensus 199 ----~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~ 274 (477)
..++++.+++.|++.|++.+...+...+++.++.|+++|+++.++.....++|.++||.+++.+.+..+|++.|++
T Consensus 102 ~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~ 181 (417)
T PRK10489 102 NAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGL 181 (417)
T ss_pred HHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHH
Confidence 1456678889999999998888899999999999999999999999999999999999999999988899999998
Q ss_pred HHHHHHHHHHHHHHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHHHHHHhHHHHHH
Q 011781 275 FGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYT 354 (477)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 354 (477)
.++..++..+..+.+++.+++++++ ++.. +. . ...++..+++|.++...+..++... ...
T Consensus 182 ~~~~~~~~~~~~~~l~~~~~~~~~~----~~~~---~~---~---------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 241 (417)
T PRK10489 182 AAAGTFITLLPLLRLPALPPPPQPR----EHPL---RS---L---------LAGFRFLLASPVVGGIALLGGLLTM-ASA 241 (417)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCccc----ccch---HH---H---------HHHHHHHHcChHHHHHHHHHHHHHH-HHh
Confidence 8877776666665555433221100 0000 00 0 0124567788887766655544333 356
Q ss_pred HhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhhhHHHHhhhcccCCC
Q 011781 355 CLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGL 434 (477)
Q Consensus 355 ~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~~~~l~~~~~~~ 434 (477)
...++|.|+++.+|.++...|++.+...++.+++.++.+++.||.+++ +.+. .+.++.++.+.+.... ++
T Consensus 242 ~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~--------~~l~-~~~~~~~~~~~~~~~~-~~ 311 (417)
T PRK10489 242 VRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPG--------LLML-LSTLGSFLAVGLFGLM-PM 311 (417)
T ss_pred HHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcc--------hHHH-HHHHHHHHHHHHHHcc-ch
Confidence 678899999887899999999999999999999999999999875332 2222 2223333333333222 22
Q ss_pred chHHHHHHHHHHHHhhhhhhhhhhHhhhc-cCccchhhhhhhc
Q 011781 435 PHWEIVGILTAGLALSSFALSGLYCTHQD-ISPEYASILLYLE 476 (477)
Q Consensus 435 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~p~~~g~~~gl~ 476 (477)
.....+..++.|.+.+ ...+......++ .++++||+++|+.
T Consensus 312 ~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~p~~~~g~~~g~~ 353 (417)
T PRK10489 312 WILAVLCLALFGYLSA-ISSLLQYTLLQTQTPDEMLGRINGLW 353 (417)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHhhCCHHHHHHHHHHH
Confidence 2233344455555433 333444455555 4556699998863
No 49
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.96 E-value=8.1e-27 Score=235.27 Aligned_cols=290 Identities=18% Similarity=0.203 Sum_probs=207.4
Q ss_pred hhHHHHHHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHH
Q 011781 111 QRYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWS 190 (477)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 190 (477)
++++.+..+++..++..++.....+..|.+.+++|.+..+.+++.+.+.++..++.++.|+++||+|||+++..+.++.+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 96 (496)
T PRK03893 17 AQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFS 96 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 35567778888888888999999999999999999999999999999999999999999999999999999999998888
Q ss_pred HHHHHHHHhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhH
Q 011781 191 LATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWES 270 (477)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~ 270 (477)
++.++.. ..++++.+++.|++.|++.+...+....++.+.+|+++|++++++......+|..++|.+++.+.+..+||+
T Consensus 97 ~~~~~~~-~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~ 175 (496)
T PRK03893 97 VGTLACG-FAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRA 175 (496)
T ss_pred HHHHHHH-HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHH
Confidence 8887775 567788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhh----------------ccCCCCCCHHH---
Q 011781 271 VFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEM----------------GESLKDVPWKA--- 331 (477)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~--- 331 (477)
.|++.++..++..+.....+++++.+.+..... ......+......+.. -.......+..
T Consensus 176 ~f~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (496)
T PRK03893 176 LFFIGILPIIFALWLRKNLPEAEDWKEKHAGKA-PVRTMVDILYRGEHRIINILLTLAAAAALWFCFAGNLQNAAIVAVL 254 (496)
T ss_pred HHHHHHHHHHHHHHHHHhCCCchhhhhhccccc-cchhHHHHHhcchhHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHH
Confidence 998754444333333333333221111100000 0000000000000000 00000000000
Q ss_pred ----------------HhhcHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhc
Q 011781 332 ----------------IFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQF 395 (477)
Q Consensus 332 ----------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l 395 (477)
..+.+......+..+...........++|.|+++.+|++..+.+.+.+...++.+++.++.|++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l 334 (496)
T PRK03893 255 GLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFL 334 (496)
T ss_pred HHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000001111111111111112355789999987789999999999999999999999999999
Q ss_pred hhHHHhc
Q 011781 396 ADNLIAT 402 (477)
Q Consensus 396 ~dr~g~~ 402 (477)
.||+++|
T Consensus 335 ~dr~g~~ 341 (496)
T PRK03893 335 GDWLGTR 341 (496)
T ss_pred HHHhcch
Confidence 9999876
No 50
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.96 E-value=1.8e-26 Score=224.23 Aligned_cols=319 Identities=14% Similarity=0.000 Sum_probs=225.1
Q ss_pred HHHHHHHhhhhHHHHhHHh-hhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHH-HHHHHHHHHHHHHH
Q 011781 121 LAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQT-GVLIWSLATALLPL 198 (477)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~-~~~~~~~~~~~~~~ 198 (477)
+..++..+......+.+|. +.+++|.|..++|++.+++.+...+.+++.|+++||+|||+.++. +.++..++.+++ .
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~-~ 82 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLF-A 82 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHH-H
Confidence 4466777788888888887 567899999999999999999999999999999999999887655 444444455555 4
Q ss_pred hhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhH--HHHHHhhhhhHHHHHHhhhHHhhcccChhHHHHHHH
Q 011781 199 LAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRA--VSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFG 276 (477)
Q Consensus 199 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~--~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~~~ 276 (477)
.+++++.+++.|++.|.+.+...|...+++.++.++++|++. .+......++|.++||.+++.+.+..|||+.|++.+
T Consensus 83 ~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~ 162 (375)
T TIGR00899 83 WNRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAA 162 (375)
T ss_pred hcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHH
Confidence 567778888889999888888888888888898877766654 678888889999999999999999999999999998
Q ss_pred HHHHHHHHHHHH-hccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHHHHHHhHHHHHHH
Q 011781 277 LLGIAWFSGFKI-LQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTC 355 (477)
Q Consensus 277 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 355 (477)
++.++..+..++ +++.++.+.++ . + ..+.+..++++.++...+..++........
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~---~-~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (375)
T TIGR00899 163 LAFVLCGVLVWLFLPSYPRGAPGA---L-T--------------------RLEVRGLLASRDTRLLFVACTLMWGCNILY 218 (375)
T ss_pred HHHHHHHHHHHHhCCCcccCcccc---c-C--------------------cchhhhhhcCcchHHHHHHHHHHHHHHHHH
Confidence 877766555444 44433211100 0 0 011234566777776666555555555566
Q ss_pred hhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhhhHHHHhhhcccCCCc
Q 011781 356 LSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLP 435 (477)
Q Consensus 356 ~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~~~~l~~~~~~~~ 435 (477)
..++|.|+++.+|.++.+.+.+.....+..+++.++.|++.||+++| +.... ..+...+........ ++.
T Consensus 219 ~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~--------~~~~~-~~~~~~~~~~~~~~~-~~~ 288 (375)
T TIGR00899 219 IINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKR--------RLMLL-AALAGVAFYTGLAAD-NSL 288 (375)
T ss_pred HhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcch--------hHHHH-HHHHHHHHHHHHHHH-HHH
Confidence 77889999888899999999888887778888899999999999876 33222 222222222222221 122
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhHhhhccCccchhhhhhh
Q 011781 436 HWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLYL 475 (477)
Q Consensus 436 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~g~~~gl 475 (477)
....+...+.+.+.+. ..+......++..|+++++++|+
T Consensus 289 ~~~~~~~~~~g~~~g~-~~~~~~~~~~~~~~~~~~~~~~~ 327 (375)
T TIGR00899 289 WALLMLQLLNAIFIGI-LAGIGMLYFQDLMPGRAGAATTL 327 (375)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHhCcchhhHHHHH
Confidence 2233333344444443 33455566677778888888775
No 51
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.96 E-value=1.2e-26 Score=227.38 Aligned_cols=320 Identities=17% Similarity=0.144 Sum_probs=224.6
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHhHHh-hhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHH
Q 011781 114 KLIGTTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLA 192 (477)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 192 (477)
+.+..+.+..++..++..+..+.+|. +.+++|.|+.++|++.+++.+++.+++++.|+++||+|||+++..+.++.+++
T Consensus 15 ~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~ 94 (399)
T PRK05122 15 LRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALS 94 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHH
Confidence 55666777888888888889989887 57889999999999999999999999999999999999999999998887776
Q ss_pred HHHHHHh--h-----chHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcc
Q 011781 193 TALLPLL--A-----GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN 265 (477)
Q Consensus 193 ~~~~~~~--~-----~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~ 265 (477)
.+++... . .+++.+++.|++.|++.+...+....++.+++|+++|++++++......+|.++|+.+++.+.+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~ 174 (399)
T PRK05122 95 GLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHW 174 (399)
T ss_pred HHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHc
Confidence 5544221 1 14567899999999999999999999999999999999999999999999999999999999999
Q ss_pred cChhHHHHHHHHHHHHHHHHHHHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHHHH
Q 011781 266 LGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAH 345 (477)
Q Consensus 266 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 345 (477)
.||++.+++.+++.++..+... +.++.+.+ ..++ .++++.++ ..+......
T Consensus 175 ~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~-----------------------~~~~~~~~--~~~~~~~~~ 225 (399)
T PRK05122 175 GGLAGLGLLIMLLALLGLLLAR---PRPAVPPV-KGER-----------------------LPFRRVLG--RVWPYGMGL 225 (399)
T ss_pred ccHHHHHHHHHHHHHHHHHHHh---cCCCCCCC-Cccc-----------------------hhHHHHHH--HHHHHHHHH
Confidence 9999988876665544333221 11111110 0000 01122222 122222233
Q ss_pred HHhHHHHHHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhhhHHHH
Q 011781 346 FCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCM 425 (477)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~~~ 425 (477)
.+..+.+.....+++.|+.+ .|. ...+.......++.++++++.+++.||+++| +..... ....++..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~--------~~~~~~-~~~~~~~~ 293 (399)
T PRK05122 226 ALASIGFGTIATFITLYYAA-RGW--DGAALALTLFGVAFVGARLLFGNLINRLGGL--------RVAIVS-LLVEILGL 293 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHH-ccc--ccchHHHHHHHHHHHHHHHHHHHHHHHhccH--------HHHHHH-HHHHHHHH
Confidence 33444556667788888865 465 3456667788888999999999999999866 333322 22222222
Q ss_pred hhhcccCCCchHHHHHHHHHHHHhhhhhhhhhhHhhhccCccchhhhhhh
Q 011781 426 TLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLYL 475 (477)
Q Consensus 426 ~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~g~~~gl 475 (477)
.+... .++....++..++.|++.+...........+..+++++|+++|+
T Consensus 294 ~~~~~-~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 342 (399)
T PRK05122 294 LLLWL-APSPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGA 342 (399)
T ss_pred HHHHH-hccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 22222 22333444455666666655554444445556777889999886
No 52
>PRK09952 shikimate transporter; Provisional
Probab=99.96 E-value=3.4e-26 Score=226.15 Aligned_cols=273 Identities=18% Similarity=0.142 Sum_probs=197.8
Q ss_pred hhHHHHHHHHHHHHHHHhhhhHHHHhHHh-hhhhh--CCCcchhhHHH-----HHHHHHHHHhhhhhhhhhhhhcChhHH
Q 011781 111 QRYKLIGTTSLAFVICNMDKVNLSVAIIP-MSHRF--GWNSSVAGLVQ-----SSFFWGYALSQLPGGWLAKIFGGRKVL 182 (477)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--g~s~~~~g~~~-----~~~~~~~~~~~~~~g~l~dr~g~r~~~ 182 (477)
++++.+....+..++..++...++...|. +.+++ +.++. .+++. ++..++..+++++.|+++||+|||+++
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l 97 (438)
T PRK09952 19 RARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRML 97 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHH
Confidence 34567777778888899999998888775 45555 66666 45543 244556678899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhchHH--------HHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHH
Q 011781 183 QTGVLIWSLATALLPLLAGFMP--------GLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVA 254 (477)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~i 254 (477)
..+.++++++.++++ +++++. .++++|+++|++.+..++....++.|++|+++|++..+....+..+|.++
T Consensus 98 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l 176 (438)
T PRK09952 98 MLTVWMMGIATALIG-LLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLL 176 (438)
T ss_pred HHHHHHHHHHHHHHh-cCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHH
Confidence 999999999988875 555544 58889999999999999999999999999999999999999999999999
Q ss_pred HHhhhHHhh--------cccChhHHHHHHHHHHHHHHHHHHHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCC
Q 011781 255 GLLLAPPII--------ENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKD 326 (477)
Q Consensus 255 g~~~~~~l~--------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (477)
++.+...+. +.+|||+.|++.+++.++........+|+++..+. +.+ .+ +.+.+.
T Consensus 177 ~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~~~l~~~~~es~~~~~~----~~~-----------~~--~~~~~~ 239 (438)
T PRK09952 177 STGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIALWVRNGMEESAEFEQQ----QHE-----------QA--AAKKRI 239 (438)
T ss_pred HHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHHHHHHHhCCCChhHHHH----Hhh-----------cc--cccccC
Confidence 887777654 25799999998877654433222222222110000 000 00 000011
Q ss_pred CCHHHHhhcHHHHHHHH-HHHHhHHHHHHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhc
Q 011781 327 VPWKAIFRSKAVWAMIY-AHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIAT 402 (477)
Q Consensus 327 ~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~ 402 (477)
...+.++++|+.|...+ ..++.....+....+.|.|+++.+|++......+....++..+++.++.|+++||+|+|
T Consensus 240 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr 316 (438)
T PRK09952 240 PVIEALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRR 316 (438)
T ss_pred CHHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCch
Confidence 11234667777766544 34455566777888999999888898887665566666777888899999999999877
No 53
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.96 E-value=6.4e-26 Score=221.60 Aligned_cols=266 Identities=17% Similarity=0.168 Sum_probs=215.4
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHH
Q 011781 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLAT 193 (477)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 193 (477)
|.+.......+....+...+.+.+|.+.+++|.+..+.++..+++.++..+++++.|+++||+|||+.+..+.++.+++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~ 82 (392)
T PRK10473 3 RFLLCSFALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIAS 82 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHH
Confidence 44455556666677777788889999999999999999999999999999999999999999999999999998888888
Q ss_pred HHHHHhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHH
Q 011781 194 ALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFY 273 (477)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~ 273 (477)
+++. ..++++.+++.|++.|++.+...+...+++.+.+|+++|++++++.+....+|..++|.+++.+.+..+|++.|+
T Consensus 83 ~~~~-~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~ 161 (392)
T PRK10473 83 LLCS-LAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFY 161 (392)
T ss_pred HHHH-HhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHH
Confidence 7774 567778889999999999999999999999999999999999999999999999999999999888899999999
Q ss_pred HHHHHHHHHHHHH-HHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHHHHHHhHHHH
Q 011781 274 IFGLLGIAWFSGF-KILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGH 352 (477)
Q Consensus 274 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 352 (477)
+.+++.++..+.. ..++++++++++ ++... ....++.++++.++...+...+.....
T Consensus 162 ~~~~~~~i~~~~~~~~~~~~~~~~~~---~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (392)
T PRK10473 162 TMAAMGILVLLLSLFILKETRPARAP---AASSK-------------------PRENSESLLNRFFLSRLVITTLSVTVI 219 (392)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCcccC---Cccch-------------------HHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 9888777665544 334443222110 00000 001245677887776665555555555
Q ss_pred HHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhc
Q 011781 353 YTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIAT 402 (477)
Q Consensus 353 ~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~ 402 (477)
..+..+.|.++++.+|++..+.+.+.+..+++.+++.++.+++.||+|+|
T Consensus 220 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~ 269 (392)
T PRK10473 220 LTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPR 269 (392)
T ss_pred HHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH
Confidence 56667778888888899999999999999999999999999999999876
No 54
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.96 E-value=9.9e-27 Score=233.47 Aligned_cols=351 Identities=19% Similarity=0.200 Sum_probs=229.7
Q ss_pred HHHHHHHHHHHHhhhhHHHHhHHhhhhhhCCC--------cchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHH
Q 011781 116 IGTTSLAFVICNMDKVNLSVAIIPMSHRFGWN--------SSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVL 187 (477)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s--------~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 187 (477)
...+.++.+...++...+....+.+..+++.+ ..+.+++.+++.++..++++++|+++||+|||+++.++.+
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~ 109 (481)
T TIGR00879 30 SLIAAIGGLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIAL 109 (481)
T ss_pred HHHHHHHHHhcccccchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHH
Confidence 33444455566677788888888888888777 8999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhc--hHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhh---HHh
Q 011781 188 IWSLATALLPLLAG--FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLA---PPI 262 (477)
Q Consensus 188 ~~~~~~~~~~~~~~--~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~---~~l 262 (477)
+..++.++...... +++.+++.|++.|++.+...+....++.|++|+++|++++++.+.+..+|.++++.++ +..
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~ 189 (481)
T TIGR00879 110 LFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSL 189 (481)
T ss_pred HHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcC
Confidence 88888777643332 3457899999999999999999999999999999999999999999999999999999 766
Q ss_pred hcccChhHHHHHHHHHHHHHHHHHHHhccCCcCCCCCCCCcc--hhhhh-----------hh--hhhhhHHhhccCCCCC
Q 011781 263 IENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRS--NYINM-----------KK--SLSASLEEMGESLKDV 327 (477)
Q Consensus 263 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-----------~~--~~~~~~~~~~~~~~~~ 327 (477)
.+..+||+.|++.++..++..+..+++++++.....+...++ +.... .+ ......+..+......
T Consensus 190 ~~~~~w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (481)
T TIGR00879 190 NNTLGWRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQP 269 (481)
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhccc
Confidence 677899999999777666666666666654321100000000 00000 00 0000000000001111
Q ss_pred CHHHHhh------cHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHh
Q 011781 328 PWKAIFR------SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIA 401 (477)
Q Consensus 328 ~~~~~~~------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~ 401 (477)
.+...++ .+.++...+..+...........+.|.+++ ..|++....+.......++.+++.++.+++.||+++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~ 348 (481)
T TIGR00879 270 SWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFE-NAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGR 348 (481)
T ss_pred cHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHH-HcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 1333333 223333333334333344455666777775 479999888889899999999999999999999987
Q ss_pred cCcccceehhhhhHHhhhhhHHHHhhhc---ccCCC------chHHHHHHHHHHHHhhhhhhhhhhHhhhcc-Cccchhh
Q 011781 402 TGVETTMVRKICQTIAFLSPAVCMTLSS---IDLGL------PHWEIVGILTAGLALSSFALSGLYCTHQDI-SPEYASI 471 (477)
Q Consensus 402 ~~~~~~~~r~~~~~~~~~~~~~~~~l~~---~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~p~~~g~ 471 (477)
| +..... ++..++++.+.. ..... ....+....+++.+++....+.......+. +++++|+
T Consensus 349 ~--------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 419 (481)
T TIGR00879 349 R--------PLLLIG-AAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPK 419 (481)
T ss_pred h--------HHHHHH-HHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHH
Confidence 6 333222 222222222221 11111 222233333334444434445555554554 5567999
Q ss_pred hhhhc
Q 011781 472 LLYLE 476 (477)
Q Consensus 472 ~~gl~ 476 (477)
++|+.
T Consensus 420 ~~~~~ 424 (481)
T TIGR00879 420 GISIA 424 (481)
T ss_pred HHHHH
Confidence 88864
No 55
>PRK12382 putative transporter; Provisional
Probab=99.96 E-value=3.1e-26 Score=223.86 Aligned_cols=320 Identities=14% Similarity=0.105 Sum_probs=214.8
Q ss_pred HHHHHHHHHHHHHhhhhHHHHhHHh-hhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHH
Q 011781 115 LIGTTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLAT 193 (477)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 193 (477)
.+..+.++.++......+..+.+|. +.+++|.|..++|++.+++.+++.++++++|+++||+|||+++..+.++..++.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~ 95 (392)
T PRK12382 16 SLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAG 95 (392)
T ss_pred cHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHH
Confidence 3444555666677777788888886 578999999999999999999999999999999999999999998877665544
Q ss_pred HHHH---H----hhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhccc
Q 011781 194 ALLP---L----LAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL 266 (477)
Q Consensus 194 ~~~~---~----~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~ 266 (477)
+... . ..++++.+++.|++.|++.+...+...+++.+++|+++|++++++.+.+..+|..+||.+++++.+..
T Consensus 96 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~ 175 (392)
T PRK12382 96 LAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHF 175 (392)
T ss_pred HHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3221 1 12466789999999999999888999999999999999999999999999999999999999999989
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHHHHH
Q 011781 267 GWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHF 346 (477)
Q Consensus 267 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 346 (477)
||++.+.+..++.++........++.+ .++ +++. ++++..+ .+|...+..+
T Consensus 176 g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~----------------------~~~~~~~--~~~~~~~~~~ 226 (392)
T PRK12382 176 GFAALALTTMVLPLLAWAFNGTVRKVP---AHA--GERP----------------------SLWSVVG--LIWKPGLGLA 226 (392)
T ss_pred ChHHHHHHHHHHHHHHHHHHHhccCCC---CCc--ccCc----------------------hHHHHHH--HHHHhHHHHH
Confidence 999877765544333322221111111 000 0000 0111111 1222222222
Q ss_pred HhHHHHHHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhhhHHHHh
Q 011781 347 CGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMT 426 (477)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~~~~ 426 (477)
+..........+.|.|+++ .|++. .+.......++.++++++.|++.||+|+| +...... ....+...
T Consensus 227 l~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~g~~--------~~~~~~~-~~~~~~~~ 294 (392)
T PRK12382 227 LQGVGFAVIGTFVSLYFAS-KGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRFGGV--------KVAIVSL-LVETVGLL 294 (392)
T ss_pred HHHHHHhHHHHHHHHHHHh-cCCch--hHHHHHHHHHHHHHHHHHHHHHHHhcCCC--------eehHHHH-HHHHHHHH
Confidence 3334455667788888865 46543 45666677888889999999999999876 2332222 22222222
Q ss_pred hhcccCCCchHHHHHHHHHHHHhhhhhhhhhhHhhhccCccchhhhhhhc
Q 011781 427 LSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLYLE 476 (477)
Q Consensus 427 l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~g~~~gl~ 476 (477)
+.... ++..+..+..++.|.+.+...........+..+++++|+++|+.
T Consensus 295 ~~~~~-~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 343 (392)
T PRK12382 295 LLWLA-PTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGY 343 (392)
T ss_pred HHHHc-ccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 22222 23333444455556555444443344455667788899998863
No 56
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.96 E-value=5.8e-26 Score=221.76 Aligned_cols=322 Identities=14% Similarity=0.082 Sum_probs=223.4
Q ss_pred HHHHHHHHHhhhhHHHHhHHh-hhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHH
Q 011781 119 TSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLP 197 (477)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~ 197 (477)
+....++.........++++. +.+++|.|..++|++.+...++..+.+++.|+++||+|||+++..+.++.+++.+++.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~ 94 (400)
T PRK11646 15 LLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMA 94 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHH
Confidence 334555566666666666655 6788999999999999999999999999999999999999999999999988888774
Q ss_pred HhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHHHHHH
Q 011781 198 LLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGL 277 (477)
Q Consensus 198 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~~~~ 277 (477)
..++++.+++.|++.|++.+...+...+++.+++|+++|++++|+......+|..+||.+++++. .+||++.|++.++
T Consensus 95 -~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~ 172 (400)
T PRK11646 95 -IAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAV 172 (400)
T ss_pred -HhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHH
Confidence 56777889999999999998888999999999999999999999999999999999999999998 7799999999887
Q ss_pred HHHHHHHHHHHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHHHHHHhHHHHHHHhh
Q 011781 278 LGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLS 357 (477)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 357 (477)
+.++..++..+..++++. .+ .+++ ...++++++++|.++...+..+...........
T Consensus 173 ~~~~~~i~~~~~~~~~~~-~~---~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (400)
T PRK11646 173 LFVLAAAFNAWLLPAYKL-ST---VRTP-------------------VREGMTRVLRDKRFVTYVLTLTGYYMLAVQVML 229 (400)
T ss_pred HHHHHHHHHHHhCCcccc-cc---cchh-------------------hHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHH
Confidence 766654443333221110 00 0000 011246778888887666555554444444567
Q ss_pred hhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhH-HHhcCcccceehhhhhHHhhhhhHHHHhhhcccCCCch
Q 011781 358 WLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADN-LIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPH 436 (477)
Q Consensus 358 ~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~r~~~~~~~~~~~~~~~~l~~~~~~~~~ 436 (477)
++|.|+++.. .++.+.+++.+..+++...+....+++.|| ++.+ +... .+....++...+.... ++..
T Consensus 230 ~~p~~~~~~~-~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~--------~~~~-~~~~~~~~~~~~l~~~-~~~~ 298 (400)
T PRK11646 230 MLPIMVNDIA-GSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLE--------HRLM-AGLLIMSLSMFPIGMV-SNLQ 298 (400)
T ss_pred hhhhhHHhhc-CCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchh--------HHHH-HHHHHHHHHHHHHHHh-hhHH
Confidence 8899998754 477788888888777776666555666654 3322 2222 2222222222222222 2223
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhHhhhccCccchhhhhhhc
Q 011781 437 WEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLYLE 476 (477)
Q Consensus 437 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~g~~~gl~ 476 (477)
+..+...+.+.+.+...+.......+..+++++|+++|+.
T Consensus 299 ~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~ 338 (400)
T PRK11646 299 QLFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFS 338 (400)
T ss_pred HHHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHH
Confidence 3333334445544433333333344456677899998863
No 57
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.96 E-value=3.9e-26 Score=222.10 Aligned_cols=260 Identities=15% Similarity=0.104 Sum_probs=204.6
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHH
Q 011781 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLAT 193 (477)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 193 (477)
+.+..++++.++.........+.+|.+.+++|.|..++|++.+.+.++..+++++.|+++||+|||+.+..+.++.+++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~ 85 (381)
T PRK03633 6 RPVLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGC 85 (381)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44666777788888999999999999999999999999999999999999999999999999999999999999988888
Q ss_pred HHHHHhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHH
Q 011781 194 ALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFY 273 (477)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~ 273 (477)
++++ .+++++.+++.|++.|++.+...+.....+.+..++++|+++++++..+..+|..+||.+++.+.+...+...+
T Consensus 86 ~~~~-~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~- 163 (381)
T PRK03633 86 AGLG-LMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVLPW- 163 (381)
T ss_pred HHHH-HhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchHHH-
Confidence 7774 56788999999999999999988888888888898899999999999999999999999999987654333332
Q ss_pred HHHHHHHHHHHHHHHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHHHHHHhHHHHH
Q 011781 274 IFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHY 353 (477)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 353 (477)
..+.+....... .+.+.+++..+ + + +..++++.+++|.++......+.....+.
T Consensus 164 ~~~~~~~~~~~~-~~~~~~~~~~~-~---~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (381)
T PRK03633 164 VTGLVLAAILPL-LFTRILNQQAE-N---H---------------------DSTSIWPMLKLRQARLGVNGCIISGIVLG 217 (381)
T ss_pred HHHHHHHHHHHH-HHhcccCCCCC-C---C---------------------CCCCHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 222222221111 12121111100 0 0 01124567788877765555555555566
Q ss_pred HHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhc
Q 011781 354 TCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIAT 402 (477)
Q Consensus 354 ~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~ 402 (477)
....++|.|+++ .|.+....+.+.+...++.++++++.|++.||+++|
T Consensus 218 ~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~ 265 (381)
T PRK03633 218 SLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRL 265 (381)
T ss_pred HHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcH
Confidence 677889999976 699999999999999999999999999999999876
No 58
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.96 E-value=2.3e-26 Score=231.02 Aligned_cols=353 Identities=16% Similarity=0.176 Sum_probs=226.3
Q ss_pred hHHHHHHHHHHHHHHHhhhhHHHHhHHhhhhhh--------CCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHH
Q 011781 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRF--------GWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQ 183 (477)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~ 183 (477)
..+..+...++.+..+++...+++..+.+.+++ +.+..+.+++.+++.++..++++++|+++||+|||+++.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~ 89 (479)
T PRK10077 10 IFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLK 89 (479)
T ss_pred HHHHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 445666667778888888888888888888777 889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHh-----------hchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHH
Q 011781 184 TGVLIWSLATALLPLL-----------AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGS 252 (477)
Q Consensus 184 ~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~ 252 (477)
++.+++.++.+..+.. .+.++.+++.|++.|++.+...+...++++|++|+++|++++++.+.+..+|.
T Consensus 90 ~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~ 169 (479)
T PRK10077 90 IAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQ 169 (479)
T ss_pred HHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHH
Confidence 9988888777665421 12245678999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhHHhh--------cccChhHHHHHHHHHHHHHHHHHHHhccCCcCCCCCCCCcchh--hhhh-------hhhhh
Q 011781 253 VAGLLLAPPII--------ENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNY--INMK-------KSLSA 315 (477)
Q Consensus 253 ~ig~~~~~~l~--------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-------~~~~~ 315 (477)
++++.+++.+. +..|||+.|++.++..++..+..++++|+++....+.+.++.. .+.. +...+
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (479)
T PRK10077 170 LVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLLYFVPETPRYLMSRGKQEQAEGILRKIMGNTLATQALQE 249 (479)
T ss_pred HHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHcCCHHHHHHHHHHHcCChhHHHHHHH
Confidence 99988776553 3569999999988877777666666666543211110000000 0000 00000
Q ss_pred hHHhhccCCCCCCHHHHhhcHHHHH---HHHHHHHhHHHHHHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhh
Q 011781 316 SLEEMGESLKDVPWKAIFRSKAVWA---MIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIA 392 (477)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 392 (477)
..+..+++.. ..+..+.-..... .....+..........++.|.+..+ .|.+....++.....++..+++.++.
T Consensus 250 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~-~g~~~~~~~~~~~~~~~~~~i~~~~~ 326 (479)
T PRK10077 250 IKHSLDHGRK--TGGKLLMFGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKT-LGASTDIALLQTIIVGVINLTFTVLA 326 (479)
T ss_pred HHHHHHHhhh--hhhhhcchhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHH-cCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 0000000000 0000110000000 0111111122233344566777654 78887777777778888999999999
Q ss_pred hhchhHHHhcCcccceehhhhhHHhhhhhHHHHhhh-cc--cCCCchHHHHHHHHHHHHhhhhhhhhhhHhhhcc-Cccc
Q 011781 393 AQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLS-SI--DLGLPHWEIVGILTAGLALSSFALSGLYCTHQDI-SPEY 468 (477)
Q Consensus 393 g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~~~~l~-~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~p~~ 468 (477)
++++||+|+| +.... +.++.+++.... .. ......+....+++.+.+++....+.......+. ++++
T Consensus 327 g~l~dr~g~r--------~~~i~-~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~ 397 (479)
T PRK10077 327 IMTVDKFGRK--------PLQII-GALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAI 397 (479)
T ss_pred HHHHHHhcCh--------HHHHH-hHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhH
Confidence 9999999876 33332 222323222221 11 1111223333344444444433334555555554 5567
Q ss_pred hhhhhhhc
Q 011781 469 ASILLYLE 476 (477)
Q Consensus 469 ~g~~~gl~ 476 (477)
||+++|+.
T Consensus 398 r~~~~g~~ 405 (479)
T PRK10077 398 RGKALAIA 405 (479)
T ss_pred HHHHHHHH
Confidence 99999863
No 59
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.96 E-value=2.6e-27 Score=230.95 Aligned_cols=284 Identities=19% Similarity=0.295 Sum_probs=229.0
Q ss_pred HHHHHHHHHHHHHhhhhHHHHh-HHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHH
Q 011781 115 LIGTTSLAFVICNMDKVNLSVA-IIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLAT 193 (477)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 193 (477)
++..++..++........++.. +..+.++.+....+.+.+.+++.++++++.++++.+.||++..+.+....+++++..
T Consensus 46 i~~~~~~~y~~~~~d~~si~~a~l~g~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~ 125 (495)
T KOG2533|consen 46 ILPFLCYLYFHAYLDKSSIVNASLSGLKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFG 125 (495)
T ss_pred HHHHHHHHHHHHhcchhcchhHHHcCCccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHH
Confidence 3444455555666665555444 444778999999999999999999999999999999999998888888888877776
Q ss_pred HHHHHhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhh------cccC
Q 011781 194 ALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPII------ENLG 267 (477)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~------~~~g 267 (477)
++.. ..++++.+++.|++.|+..+..+|....+++.++.+++|+..+|++.+..++|.++|++++..+. ...|
T Consensus 126 ~~~~-~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~g 204 (495)
T KOG2533|consen 126 FLTA-AVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAG 204 (495)
T ss_pred HHHH-HHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCC
Confidence 6654 47788999999999999999999999999999999999999999999999999999999999864 3468
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHHHHHH
Q 011781 268 WESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFC 347 (477)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 347 (477)
|||.|++.|++.++..++.++..++.+.+..-.+++++....++..++..+..+++.+...+++.+++|.+|.+++..++
T Consensus 205 W~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~fl~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~a~~dp~vw~~~l~~~~ 284 (495)
T KOG2533|consen 205 WRWLFIIEGVITLVLGIVVFFFLPDNPSKAWFLTDEEKELVVERLRESPSGGIENKFKWKGFKEALKDPGVWPFSLCYFF 284 (495)
T ss_pred ceeehhHHHHHHHHHHheEEEEecCChhhccccchHHHHHHHHHHHhccCCCcccccCHHHHHHHHhchhHHHHHHHHHH
Confidence 99999999999988776666554444443333333332222111111122222222556678899999999999999999
Q ss_pred hHHHHHHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHH
Q 011781 348 GSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNL 399 (477)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~ 399 (477)
.....+++.+|+|.|+.+..|++..+++.+.....++++++.+++|.++||+
T Consensus 285 ~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~ 336 (495)
T KOG2533|consen 285 LKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRL 336 (495)
T ss_pred HhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHH
Confidence 9999999999999999885679999999999999999999999999999995
No 60
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.95 E-value=1.1e-25 Score=216.27 Aligned_cols=303 Identities=30% Similarity=0.442 Sum_probs=247.8
Q ss_pred HHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHH
Q 011781 118 TTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLP 197 (477)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~ 197 (477)
.+....+....+.....+..|.+.+++|.+..+.+++.+...++..+++++.|+++||+|||+.+..+..+..++.++..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~ 82 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLA 82 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHH
Confidence 34556667778888889999999999999999999999999999999999999999999999999999999888887774
Q ss_pred HhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHHHHHH
Q 011781 198 LLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGL 277 (477)
Q Consensus 198 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~~~~ 277 (477)
..++++.+++.|++.|++.+...+...+++.|++|+++|++.+++.+....+|..++|.+++.+.+..+|++.+++.++
T Consensus 83 -~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (352)
T cd06174 83 -FASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAI 161 (352)
T ss_pred -HhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 5577889999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHHHHHHhHHHHHHHhh
Q 011781 278 LGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLS 357 (477)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 357 (477)
+.++..+...+++ |.++...+..++..........
T Consensus 162 ~~~~~~~~~~~~~---------------------------------------------~~~~~~~~~~~~~~~~~~~~~~ 196 (352)
T cd06174 162 LGLLLALLLLFLL---------------------------------------------RLLLLLALAFFLLSFGYYGLLT 196 (352)
T ss_pred HHHHHHHHHHHHH---------------------------------------------HHHHHHHHHHHHHHhHHHHHHH
Confidence 8777766655543 4566677777888888889999
Q ss_pred hhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehh-hhhHHhhhhhHHHHhhhcccCCCch
Q 011781 358 WLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRK-ICQTIAFLSPAVCMTLSSIDLGLPH 436 (477)
Q Consensus 358 ~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~-~~~~~~~~~~~~~~~l~~~~~~~~~ 436 (477)
+.|.+..+.+|.+..+.+...+...++..++.++.+++.||+++| + ... .+.....++..+.... ++..
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~--------~~~~~-~~~~~~~i~~~~~~~~-~~~~ 266 (352)
T cd06174 197 YLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRR--------RLLLL-IGLLLAALGLLLLALA-PSLA 266 (352)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--------hHHHH-HHHHHHHHHHHHHHHh-ccHH
Confidence 999999887799999999999999999999999999999999887 3 332 3333333333333222 2234
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhHhhhccCccchhhhhhhc
Q 011781 437 WEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLYLE 476 (477)
Q Consensus 437 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~g~~~gl~ 476 (477)
...+..++.+.+.+...........+..+++++|+++|+.
T Consensus 267 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (352)
T cd06174 267 LLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLF 306 (352)
T ss_pred HHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHH
Confidence 4455566666666655544444455555668899998863
No 61
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.95 E-value=3.7e-26 Score=220.21 Aligned_cols=310 Identities=17% Similarity=0.180 Sum_probs=224.1
Q ss_pred hhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhchHHHHH
Q 011781 128 MDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLV 207 (477)
Q Consensus 128 ~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (477)
.....+++.+|.+.+++|++..+.|++.+++.+++.++.++.|+++||+|+|+++.++.++..++.+.. ..++.+.++
T Consensus 14 ~~~~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~--~~~~~~~l~ 91 (355)
T TIGR00896 14 PALTSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR--SAPGTALLF 91 (355)
T ss_pred CccccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH--HhccHHHHH
Confidence 344567888999999999999999999999999999999999999999999999999988877766555 446668888
Q ss_pred HHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhccc--ChhHHHHHHHHHHHHHHHH
Q 011781 208 LSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL--GWESVFYIFGLLGIAWFSG 285 (477)
Q Consensus 208 ~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~--g~~~~~~~~~~~~~~~~~~ 285 (477)
+.|++.|++.+...+.....+.++++ ++|++++++.+....+|..+++.+++.+.+.. +||+.|.+.+++.++..+
T Consensus 92 ~~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~~- 169 (355)
T TIGR00896 92 AGTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLALL- 169 (355)
T ss_pred HHHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHH-
Confidence 99999999998888888888888886 68999999999999999999999999888765 399998877665444322
Q ss_pred HHHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHHHHHHhHHHHHHHhhhhhHHHHH
Q 011781 286 FKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSE 365 (477)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 365 (477)
.++++.+++++++.. ......++++|+|.+|...+..++....+.....++|.|+++
T Consensus 170 -~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~ 226 (355)
T TIGR00896 170 -AWIPQVRRRVAANQT----------------------TTRLTPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILIS 226 (355)
T ss_pred -HHhhhhccccCCCCC----------------------CCCCCCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 223332211110000 001123567888998887777777777788888999999976
Q ss_pred hhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhhhHHHHhhhcccCCCchHHHHHHHHH
Q 011781 366 ELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTA 445 (477)
Q Consensus 366 ~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 445 (477)
.|++..+.+.+.+...++.++++++.|++.||+++| |+. ...+....+++............+ ....+.
T Consensus 227 -~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~-------~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~ 295 (355)
T TIGR00896 227 -HGASAATAGSLLALMQLAQAASALLIPALARRVKDQ-------RGI-VAVLAVLQLVGLCGLLFAPMHGLW--AWALVL 295 (355)
T ss_pred -cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccc-------hHH-HHHHHHHHHHHHHHHHHhhhhHHH--HHHHHH
Confidence 699999999999999999999999999999999655 222 222323323232222222112222 234455
Q ss_pred HHHhhhhhhhhhhHhhhccC-ccchhhhhhh
Q 011781 446 GLALSSFALSGLYCTHQDIS-PEYASILLYL 475 (477)
Q Consensus 446 g~~~~~~~~~~~~~~~~~~~-p~~~g~~~gl 475 (477)
|++.+...+.......++.+ ++++|+++|+
T Consensus 296 g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~ 326 (355)
T TIGR00896 296 GLGQGGAFPLALTLIGLRSRQAAQAAALSAM 326 (355)
T ss_pred HHhhhhHhHHHHHHHHHhccCHHHHHHHHHH
Confidence 66655544433333444444 4557777765
No 62
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.95 E-value=2e-25 Score=219.41 Aligned_cols=329 Identities=16% Similarity=0.110 Sum_probs=227.1
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcch-----hhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHH
Q 011781 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSV-----AGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLI 188 (477)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~-----~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 188 (477)
+....++++.++.......+.+++|.+.+++|.+..+ .|++.+++.++..++++++|+++||+|||+.+..+.++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 93 (408)
T PRK09874 14 RNLTVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALG 93 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHH
Confidence 3444556677777888888899999999999998655 48899999999999999999999999999999999888
Q ss_pred HHHHHHHHHHhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccCh
Q 011781 189 WSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGW 268 (477)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~ 268 (477)
.+++.+++. ..++++.+++.|++.|++.+ ..+....++.+.+|+++|++++++......+|.+++|.+++.+.+..+|
T Consensus 94 ~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ 171 (408)
T PRK09874 94 MGIVMVLMG-LAQNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGL 171 (408)
T ss_pred HHHHHHHHH-HHhhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCH
Confidence 888777664 56778889999999999854 5677888899999999999999999999999999999999999998999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHH-HHHHHH
Q 011781 269 ESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAM-IYAHFC 347 (477)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~ 347 (477)
++.|++.+++.++..+...++.+++.++.++. + .... + ...+.+++++++.. .+..++
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~--------~---------~~~~~~~~~~~~~~~~~~~~~ 230 (408)
T PRK09874 172 RPVFFITASVLFLCFLVTLFCIRENFQPVSKK--E--MLHM--------R---------EVVTSLKNPKLVLSLFVTTLI 230 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCcccccch--h--hhHH--------H---------HHHHhCcCCchHHHHHHHHHH
Confidence 99999998877766555444333221111100 0 0000 0 01234556665443 333344
Q ss_pred hHHHHHHHhhhhhHHHHHhhCCchh---hhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhhhHHH
Q 011781 348 GSWGHYTCLSWLPTYFSEELSLNLT---EAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVC 424 (477)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~g~~~~---~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~~ 424 (477)
..........+++.|..+..+.... ..+.+....+++.+++.+..|++.||+++| +.... +.....+.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~--------~~~~~-~~~~~~~~ 301 (408)
T PRK09874 231 IQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPE--------KILIT-ALIFSVLL 301 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc--------hhHHH-HHHHHHHH
Confidence 4445556667788888764332221 245566677788889999999999999876 33322 22222222
Q ss_pred HhhhcccCCCchHHHHHHHHHHHHhhhhhhhhhhHhhhccCccchhhhhhh
Q 011781 425 MTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLYL 475 (477)
Q Consensus 425 ~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~g~~~gl 475 (477)
....... ++.....+..++.|.+.+...+..........+++++|+++|+
T Consensus 302 ~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 351 (408)
T PRK09874 302 LIPMSFV-QTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSY 351 (408)
T ss_pred HHHHHHh-ccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehH
Confidence 2222221 2333334445556666555544444444445566778988775
No 63
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.95 E-value=2.5e-25 Score=216.35 Aligned_cols=323 Identities=11% Similarity=-0.042 Sum_probs=233.8
Q ss_pred HHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHH-HHHHHHHHHH
Q 011781 119 TSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVL-IWSLATALLP 197 (477)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~-~~~~~~~~~~ 197 (477)
+.+.++........+.+++|.+.+++|.|..++|++.+++.+...++++++|+++||+||+........ ...+..+...
T Consensus 9 l~~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~~~ 88 (382)
T TIGR00902 9 LALGFFGYFCAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAAFS 88 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHH
Confidence 445666777778889999999999999999999999999999999999999999999998543322111 1112222222
Q ss_pred HhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHHHHHH
Q 011781 198 LLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGL 277 (477)
Q Consensus 198 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~~~~ 277 (477)
..+++++.+++.|+++|.+.+...|...++..+. +++|++.+|......++|.+++|++++.+.+.+|||..|++.++
T Consensus 89 ~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~ 166 (382)
T TIGR00902 89 AGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTA 166 (382)
T ss_pred HhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHH
Confidence 3567788899999999999888889888887654 47889999999999999999999999999999999999988765
Q ss_pred HHHHHHHHHHHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHHHHHHhHHHHHHHhh
Q 011781 278 LGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLS 357 (477)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 357 (477)
+.++.. ..+.++++.++++++. ++ + .....++++++|+|++|...+..++...+...+..
T Consensus 167 ~~~~~~-~~~~~~~~~~~~~~~~-~~-~-----------------~~~~~~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~ 226 (382)
T TIGR00902 167 GLAFML-IGFLIKPTIPPKDAIP-ED-E-----------------SQGDSAFIALLKNPMNLRFLAAVCLIQGAHAAYYG 226 (382)
T ss_pred HHHHHH-HHHHcCCCCCCCcccc-cc-c-----------------cccchhHHHHHcChHHHHHHHHHHHHHHHHHHHHH
Confidence 533333 2333333211111100 00 0 00112356889999999999888888888889999
Q ss_pred hhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhhhHHHHhhhcccCCCchH
Q 011781 358 WLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHW 437 (477)
Q Consensus 358 ~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~~~~l~~~~~~~~~~ 437 (477)
+.|.|+++ .|.+..+.|.+.+...++.+++..+.+++.||+|.| +.+. .+.+...+...+... .++.+.
T Consensus 227 ~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~--------~~l~-~~~~~~~~~~~~~~~-~~~~~~ 295 (382)
T TIGR00902 227 FSAIYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSAR--------DLLL-ISAIACVGRWAIIGA-IEAFPL 295 (382)
T ss_pred HHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHH--------HHHH-HHHHHHHHHHHHHHh-HhhHHH
Confidence 99999976 899999999999999999999999999999999876 3333 444444444333333 233344
Q ss_pred HHHHHHHHHHHhhhhhhhhhhHhhhccCccchhhhhhh
Q 011781 438 EIVGILTAGLALSSFALSGLYCTHQDISPEYASILLYL 475 (477)
Q Consensus 438 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~g~~~gl 475 (477)
.+....+.|..++.........+ ++.+++++++.+|+
T Consensus 296 ~~~~q~l~g~~~~~~~~~~~~~i-~~~~~~~~~~~q~~ 332 (382)
T TIGR00902 296 IFLLQILHCGTFAVCHLAAMRYI-AAQPGSEIAKLQAL 332 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HhCCHhhHHHHHHH
Confidence 45556677777666665544444 45576677776664
No 64
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.95 E-value=2.8e-25 Score=214.22 Aligned_cols=318 Identities=12% Similarity=0.066 Sum_probs=221.3
Q ss_pred hhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhh-----cChhHH-HHHHHHHHHHHHHHHHhh--c
Q 011781 130 KVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIF-----GGRKVL-QTGVLIWSLATALLPLLA--G 201 (477)
Q Consensus 130 ~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-----g~r~~~-~~~~~~~~~~~~~~~~~~--~ 201 (477)
...+++..|.+.+++|+|.+++|+.... .+...+ .+++|+++||+ ||||.+ +.+.++.++....+.+.. .
T Consensus 4 ~~~~~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~ 81 (356)
T TIGR00901 4 LGLVGNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPST 81 (356)
T ss_pred chhHHhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcch
Confidence 3456778899999999999999999765 555554 89999999998 888875 556666666655554332 3
Q ss_pred hHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccC--------hhHHHH
Q 011781 202 FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG--------WESVFY 273 (477)
Q Consensus 202 ~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g--------~~~~~~ 273 (477)
+.+.+....++.+++.+...++..+++.|++|+++|+++.++...+..+|.++++.+++.+.+..| ||..|+
T Consensus 82 ~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~ 161 (356)
T TIGR00901 82 DLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFF 161 (356)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHH
Confidence 445567777788888888899999999999999999999999999999999999999999988888 999999
Q ss_pred HHHHHHHHHHHHHHHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHH---HHHHHHHHHHhHH
Q 011781 274 IFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKA---VWAMIYAHFCGSW 350 (477)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~ 350 (477)
+.+++.++..+..++..+++.+.++. +++.. +. ...+++.++++|. ++...+..++...
T Consensus 162 i~ai~~l~~~~~~~~~~~e~~~~~~~--~~~~~----~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (356)
T TIGR00901 162 WTALLILPGLLVTLFLAKEPQEDASV--PKPLT----QA------------VLKPIREFFQRKNMIQALLLLLLIVLYKL 223 (356)
T ss_pred HHHHHHHHHHHHHHHhccCCCccccc--chhHH----HH------------HHHHHHHHHHhcCchHHHHHHHHHHHHHH
Confidence 99887777655544433222111100 00000 00 0112456677664 6666666777777
Q ss_pred HHHHHhhhhhHHHHHhhCCchhhhHHHHHHHH-HHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhhhHHHHhhhc
Q 011781 351 GHYTCLSWLPTYFSEELSLNLTEAAWVSILPP-LASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSS 429 (477)
Q Consensus 351 ~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~-~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~~~~l~~ 429 (477)
.......++|.|+++ +|++..+.+.+....+ ++.+++.+++|++.||+|+| +.+.....+..........
T Consensus 224 ~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~--------~~l~~~~~~~~~~~~~~~~ 294 (356)
T TIGR00901 224 GDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNIL--------YALLLFGIVQALTNAGFVW 294 (356)
T ss_pred HHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHH--------HHHHHHHHHHHHHHHHHHH
Confidence 888888999999987 8999999998887766 57789999999999999976 3333333322222222211
Q ss_pred cc-CC-------CchHHH-HHHHHHHHHhhhhhhhhhhHhhhccCccchhhhhhhc
Q 011781 430 ID-LG-------LPHWEI-VGILTAGLALSSFALSGLYCTHQDISPEYASILLYLE 476 (477)
Q Consensus 430 ~~-~~-------~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~g~~~gl~ 476 (477)
.. .. ...+.+ ...++.+++.+.........+.+..+++++|+.+|+.
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~ 350 (356)
T TIGR00901 295 LASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALL 350 (356)
T ss_pred HHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHH
Confidence 11 11 123333 3344445555555555555555567788899999863
No 65
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.95 E-value=2.1e-25 Score=221.07 Aligned_cols=335 Identities=16% Similarity=0.130 Sum_probs=250.7
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHH
Q 011781 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLAT 193 (477)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 193 (477)
+.+..++++.++..++..+.....+.+..++.-|+..++++..+..+..++.++++|.++||++||++++.+.++.++..
T Consensus 10 ~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~ 89 (524)
T PF05977_consen 10 RNFRRLWIAQLISNLGDWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVA 89 (524)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHH
Confidence 45556777888888999999999999888888899999999999999999999999999999999999999988776655
Q ss_pred HHHHHhh----chHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChh
Q 011781 194 ALLPLLA----GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWE 269 (477)
Q Consensus 194 ~~~~~~~----~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~ 269 (477)
++++... .+.+.+++..++.|++.+...|+..+++.+..|+++...++++.+...+++.++||.++|.+...+|-.
T Consensus 90 ~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~ 169 (524)
T PF05977_consen 90 LLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAA 169 (524)
T ss_pred HHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHH
Confidence 4443321 346788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHHHHHHhH
Q 011781 270 SVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGS 349 (477)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 349 (477)
++|++.++..++.++.....+++.++++. .+++. .+. -+..++.+.++|.+...++..++..
T Consensus 170 ~~f~inalsfl~~i~~l~~~~~~~~~~~~---~~e~~---~~~------------l~~G~ryv~~~~~l~~~l~~~~~~~ 231 (524)
T PF05977_consen 170 AAFLINALSFLISILALLRWKPPPPPSSL---PRERF---FSA------------LREGLRYVRSSPPLRSVLLRSFLFN 231 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHcccccccccc---chhhh---hhh------------HHHHHHHHhcchHHHHHHHHHHHHH
Confidence 99999888777665555544432221111 11100 000 0123456777888777766666666
Q ss_pred HHHHHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhhhHHHHhhhc
Q 011781 350 WGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSS 429 (477)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~~~~l~~ 429 (477)
+....+...+|.+.++.+|.++...|++.+..++++++|.++.+++.+|++++ +.+... .+..+++++.+.
T Consensus 232 l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~--------~lv~~~-~~~~a~~~~~la 302 (524)
T PF05977_consen 232 LFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSR--------RLVLLA-SLLFALALLLLA 302 (524)
T ss_pred HhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcc--------hhhHHH-HHHHHHHHHHHh
Confidence 66667778899999999999999999999999999999999999998887654 333333 333333333333
Q ss_pred ccCCCchHHHHHHHHHHHHhhhhhhhhhhHhhhccCccchhhhhhhc
Q 011781 430 IDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLYLE 476 (477)
Q Consensus 430 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~g~~~gl~ 476 (477)
+. ++.+...+.+++.|.+............+...|++.+|+++|+.
T Consensus 303 l~-~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~ 348 (524)
T PF05977_consen 303 LS-PSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIY 348 (524)
T ss_pred cc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHH
Confidence 32 23333444555666665555544444444456666699999864
No 66
>PRK10054 putative transporter; Provisional
Probab=99.95 E-value=1.8e-25 Score=217.96 Aligned_cols=324 Identities=11% Similarity=0.058 Sum_probs=227.1
Q ss_pred HHHHHHHHHHHHhhhhHHHHhHHh-hhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHH
Q 011781 116 IGTTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATA 194 (477)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 194 (477)
+..+.+..++...+.....+++|. +.+++|++..++|++.+++.++..+++++.|+++||+|||+++.++.++.+++.+
T Consensus 9 ~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~ 88 (395)
T PRK10054 9 TSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFI 88 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHH
Confidence 334555666677777777777665 6678999999999999999999999999999999999999999999888888777
Q ss_pred HHHHhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHHH
Q 011781 195 LLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYI 274 (477)
Q Consensus 195 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~ 274 (477)
++. +.++++.+++++++.|.+.+...+...++..|..++++|++++++.....++|.++||.+++++.+ .+|+..|++
T Consensus 89 ~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~ 166 (395)
T PRK10054 89 AIP-LVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWL 166 (395)
T ss_pred HHH-HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHH
Confidence 764 566777788888888888777888899999999999999999999999999999999999999875 699999999
Q ss_pred HHHHHHHHHHHHH-HhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHHHHHHhHHHHH
Q 011781 275 FGLLGIAWFSGFK-ILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHY 353 (477)
Q Consensus 275 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 353 (477)
.+++.++..+... ++++++++++++ +++ ....++.+++|.++...+..++..+...
T Consensus 167 ~~~~~~i~~i~~~~~~~~~~~~~~~~---~~~--------------------~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 223 (395)
T PRK10054 167 AAICSAFPLVFIQIWVQRSEKAIATE---TGS--------------------VWSPSVLLQDKALLWFTCSGFLASFVSG 223 (395)
T ss_pred HHHHHHHHHHHHHHHHhccccccccc---hhh--------------------hhhhhhhccCceehHHHHHHHHHHHHHH
Confidence 8887776654443 344433221100 000 0012467888998888877777777766
Q ss_pred HHhhhhhHHHHHh--hCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhhhHHHHhhhccc
Q 011781 354 TCLSWLPTYFSEE--LSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSID 431 (477)
Q Consensus 354 ~~~~~~~~~~~~~--~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~~~~l~~~~ 431 (477)
.+..+.+.|.... .+.+....+.+.....+..+......+++.||.++| +.. ..++....+.+......
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~--------~~l-~~~~~~~~~~~~~~~~~ 294 (395)
T PRK10054 224 AFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIR--------PLM-TAGTLCFVIGLVGFIFS 294 (395)
T ss_pred HhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCch--------hHH-HHHHHHHHHHHHHHHHc
Confidence 6666777777543 345566677777777777777778888999988765 222 22332223322222221
Q ss_pred CCCchHHHHHHHHHHHHhhhhhhhhhhHhhhc-cCccchhhhhh
Q 011781 432 LGLPHWEIVGILTAGLALSSFALSGLYCTHQD-ISPEYASILLY 474 (477)
Q Consensus 432 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~p~~~g~~~g 474 (477)
.++.+.+.+...+.+.+.... .+.......+ .+++.+|+++|
T Consensus 295 ~~~~~~~~~~~~~~~~g~~~~-~p~~~~~~~~~~p~~~~~~~~~ 337 (395)
T PRK10054 295 GNSLLLWGMSAAVFTVGEIIY-APGEYMLIDHIAPPGMKASYFS 337 (395)
T ss_pred chHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHhCCcccceehHh
Confidence 122222334445555554333 3344444544 45556888765
No 67
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.95 E-value=3.9e-25 Score=216.12 Aligned_cols=322 Identities=18% Similarity=0.156 Sum_probs=221.5
Q ss_pred HHHhhhhHHHHhHHhhhhhhC--CCcchhhHHHHH-----HHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHH
Q 011781 125 ICNMDKVNLSVAIIPMSHRFG--WNSSVAGLVQSS-----FFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLP 197 (477)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~g--~s~~~~g~~~~~-----~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~ 197 (477)
...++...++...+.+.++.. .++.+.+.+.+. ..++..+++++.|+++||+|||+++..+.++..++.+++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~ 83 (394)
T TIGR00883 4 VEWFDFYLYGFAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIG 83 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHh
Confidence 456677777777777766654 445556665543 2333346889999999999999999999999888887775
Q ss_pred HhhchHH--------HHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhh------
Q 011781 198 LLAGFMP--------GLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPII------ 263 (477)
Q Consensus 198 ~~~~~~~--------~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~------ 263 (477)
..+++. .+++.|+++|++.+...+....++.|++++++|++..++...+..+|.++++.+++.+.
T Consensus 84 -~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~ 162 (394)
T TIGR00883 84 -LLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDD 162 (394)
T ss_pred -hCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH
Confidence 444433 47889999999999999999999999999999999999999999999999998877654
Q ss_pred --cccChhHHHHHHHHHHHHHHHHHHHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHH--HH
Q 011781 264 --ENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKA--VW 339 (477)
Q Consensus 264 --~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 339 (477)
+..+||+.|++.+++.++........+++++.+.++. +++....++++.++++. ++
T Consensus 163 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~ 222 (394)
T TIGR00883 163 ALLEWGWRIPFLVSAVLVLIGLYLRRNLEETPVFEKAQE--------------------KHKKKRGPIRETLTKHRKPFL 222 (394)
T ss_pred HhhccchHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHh--------------------ccccccCCHHHHHHhchHHHH
Confidence 3578999999877766655444434443321111000 00111234556666655 66
Q ss_pred HHHHHHHHhHHHHHHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhh
Q 011781 340 AMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFL 419 (477)
Q Consensus 340 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~ 419 (477)
...+..++..........++|.|+++.+|.+..+.+.......++..++.++.|++.||+|+| +.......+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~--------~~~~~~~~~ 294 (394)
T TIGR00883 223 LGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRR--------PVLIIFTVL 294 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchH--------HHHHHHHHH
Confidence 666666777777778889999999888899999999999999999999999999999999877 333322222
Q ss_pred hhHHH-Hhhhcc-cCCCchHHHHHHHHHHHHhhhhhhhhhhHhhhccCccchhhhhhh
Q 011781 420 SPAVC-MTLSSI-DLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLYL 475 (477)
Q Consensus 420 ~~~~~-~~l~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~g~~~gl 475 (477)
..... ..+... ...+........++.+.+.+....+......+..++++|++++|+
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 352 (394)
T TIGR00883 295 AALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASL 352 (394)
T ss_pred HHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeee
Confidence 22222 111111 112222333344455555545554444444444566678888775
No 68
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.95 E-value=4.8e-25 Score=221.97 Aligned_cols=289 Identities=17% Similarity=0.166 Sum_probs=201.8
Q ss_pred hHHHHHHHHHHHHHHHhhhhHHHHhHHhhhhhh-----CCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHH
Q 011781 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRF-----GWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGV 186 (477)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~ 186 (477)
+++.+.++.++.+..+++...++...|.+..++ +.+..+.+++.+.+.++.+++++++|+++||+|||+++.++.
T Consensus 14 ~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~ 93 (502)
T TIGR00887 14 HFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMEL 93 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHH
Confidence 455666777788888899988898888876642 345567789999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHhhch------HHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhH
Q 011781 187 LIWSLATALLPLLAGF------MPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAP 260 (477)
Q Consensus 187 ~~~~~~~~~~~~~~~~------~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~ 260 (477)
+++.++.++.+ .+.+ ++.+++.|++.|++.+...+....++.|++|+++|++++++.+....+|.++++.++.
T Consensus 94 ~~~~v~~~~~~-~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~ 172 (502)
T TIGR00887 94 IIMIIATVASG-LSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVAL 172 (502)
T ss_pred HHHHHHHHHHH-HccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888877765 3332 5789999999999999999999999999999999999999999999999999998887
Q ss_pred Hhhc-----------------------ccChhHHHHHHHHHHHHHHHHHHHhccCCcCCCCCCCC---cchhhh-hhh-h
Q 011781 261 PIIE-----------------------NLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAP---RSNYIN-MKK-S 312 (477)
Q Consensus 261 ~l~~-----------------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~-~ 312 (477)
.+.. ..+||+.+.+.++..++..+..+++||+++.-..+.++ ..+... ..+ .
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~~ 252 (502)
T TIGR00887 173 IVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPRYTADVAKDVEQAASDMSAVLQVK 252 (502)
T ss_pred HHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHhCcchHHHHHHHHHHhccc
Confidence 6532 23799999888887777777777888876532111111 110000 000 0
Q ss_pred hhhhHHh---hc--cCCCCCCHHHHhhc---HHHHH----HHHHHHHhHHHHHHHhhhhhHHHHHhhCCchhhhHH----
Q 011781 313 LSASLEE---MG--ESLKDVPWKAIFRS---KAVWA----MIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAW---- 376 (477)
Q Consensus 313 ~~~~~~~---~~--~~~~~~~~~~~~~~---~~~~~----~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~---- 376 (477)
..+..++ .+ ++..+.++++++++ ++.+. ..+..+.....+++...+.|.++++ .|++....+.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~-~G~~~~~~~~~~~~ 331 (502)
T TIGR00887 253 IEAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSA-IGYSPPAATNNAYE 331 (502)
T ss_pred cccCcccccchhccccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHH-HcCCCCccchhHHH
Confidence 0000000 00 01111246666653 22211 1222333344555667778898865 6886543221
Q ss_pred --------HHHHHHHHHHHHHHhhhhchhHHHhc
Q 011781 377 --------VSILPPLASVLVTSIAAQFADNLIAT 402 (477)
Q Consensus 377 --------~~~~~~~~~~~~~~~~g~l~dr~g~~ 402 (477)
......++.+++.++.+++.||+|||
T Consensus 332 ~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR 365 (502)
T TIGR00887 332 ELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRK 365 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcch
Confidence 22334456677888999999999987
No 69
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.94 E-value=4.3e-25 Score=243.80 Aligned_cols=304 Identities=13% Similarity=0.076 Sum_probs=219.0
Q ss_pred chhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHH--HHHHHHHHHHHHHHhhchHHHHHHHHHHHHhhccchhhhHHH
Q 011781 149 SVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQT--GVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATD 226 (477)
Q Consensus 149 ~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~ 226 (477)
...++..+++.++++++++++|+++||+|||+++.. ...+......+.++..++++.++++|+++|++.+...|+..+
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a 131 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYS 131 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHH
Confidence 457888899999999999999999999999997643 222222222223234477899999999999999999999999
Q ss_pred HhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHHHHHHHHHHHHHHHHHhccCCcCCCCCCCCcchh
Q 011781 227 LIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNY 306 (477)
Q Consensus 227 ~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (477)
++.+++++++|++++|+.+++.++|.++||.++|++.+..+|++.|+..+++.++.+++.++++++++......... ..
T Consensus 132 ~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 210 (1140)
T PRK06814 132 ILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLGWLASLFIPKTGNAAPDLKIDR-NI 210 (1140)
T ss_pred hhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCCeecc-ch
Confidence 99999999999999999999999999999999999999999999996655555555555556655433221111100 00
Q ss_pred hhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHH
Q 011781 307 INMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASV 386 (477)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~ 386 (477)
. +. . ...++.+.+++.+|...+..++..+....+..++|.|+++.+|.++...|++.+..+++.+
T Consensus 211 ~---~~---~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ 275 (1140)
T PRK06814 211 I---RS---T---------ITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVA 275 (1140)
T ss_pred H---HH---H---------HHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHH
Confidence 0 00 0 0135678889999999888888888888888999999999899999999999999999999
Q ss_pred HHHHhhhhchhHHHhcCcccceehhhhhHHhhhhhHHHHhhhcc------------------cCCCchHHHHHHHHHHHH
Q 011781 387 LVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSI------------------DLGLPHWEIVGILTAGLA 448 (477)
Q Consensus 387 ~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~~~~l~~~------------------~~~~~~~~~~~~~~~g~~ 448 (477)
++.++.|++.++.+++ +.+....++.+...+.+... ...+.+.+.+..+++|++
T Consensus 276 ig~~~~g~l~~~~~~~--------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 347 (1140)
T PRK06814 276 VGSFLASKLSEGRITL--------LYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAA 347 (1140)
T ss_pred HHHHHHHHHhCCceee--------eeehHHHHHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHH
Confidence 9999999999876554 22221222221111111110 012334445556667777
Q ss_pred hhhhhhhhhhHhhhccCccchhhhhhhc
Q 011781 449 LSSFALSGLYCTHQDISPEYASILLYLE 476 (477)
Q Consensus 449 ~~~~~~~~~~~~~~~~~p~~~g~~~gl~ 476 (477)
.+....+....+....+++++|+++|+.
T Consensus 348 ~~~~~~~~~~~~~~~~p~~~~G~v~g~~ 375 (1140)
T PRK06814 348 GGLYIVPLFAALQAWANPAHRARVIAAN 375 (1140)
T ss_pred HHHhHHHHHHHHHhhCCcccceeeeHHH
Confidence 6666655555555566777899998863
No 70
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.94 E-value=1.1e-24 Score=211.79 Aligned_cols=316 Identities=13% Similarity=0.033 Sum_probs=225.6
Q ss_pred HHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcCh----hHHHHHHHHHHHHHHHHHH
Q 011781 123 FVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGR----KVLQTGVLIWSLATALLPL 198 (477)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r----~~~~~~~~~~~~~~~~~~~ 198 (477)
++....+...+.+++|.+.+++|.|..++|++.+++.++..++++++|+++||+||+ +.+.++..+. .+....
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~---~~~~~~ 89 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF---AVAFWF 89 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH---HHHHHH
Confidence 445556678889999999999999999999999999999999999999999999984 3333222221 122223
Q ss_pred hhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHHHHHHH
Q 011781 199 LAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLL 278 (477)
Q Consensus 199 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~~~~~ 278 (477)
..++++.+++.|++.|++.+...|...+++.++ +++|+++++.......+|.++||.+++++.+++|||..|++.++.
T Consensus 90 ~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~ 167 (382)
T PRK11128 90 GAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAG 167 (382)
T ss_pred hcccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHH
Confidence 457788888999999999888889888887776 356888899999999999999999999999999999999887765
Q ss_pred HHHHHHHHHHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHHHHHHhHHHHHHHhhh
Q 011781 279 GIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSW 358 (477)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 358 (477)
.++..+...+.++++++.+ ++++ .+....++++++|+|.+|...+..++..........+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~----~~~~----------------~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~ 227 (382)
T PRK11128 168 VASMLLGQLLRPTIMPQGE----SRQQ----------------ESAGWPAWKALLKEPTVWRFLLCVSLLQGSHAAYYGF 227 (382)
T ss_pred HHHHHHHHHccCCCCCccc----cccc----------------cccccchHHHHHcChhHHHHHHHHHHHHHHhHhHHHH
Confidence 5544433333222211100 0000 0001234678999999998888777777777778888
Q ss_pred hhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhhhHHHHhhhcccCCCchHH
Q 011781 359 LPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWE 438 (477)
Q Consensus 359 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 438 (477)
.|.|+.+ .|.+....|.+.+...++.++..++.+++.||++++ +.+. .+.+..++...+... .++.++.
T Consensus 228 ~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~--------~~l~-~~~~~~~~~~~~~~~-~~~~~~~ 296 (382)
T PRK11128 228 SAIYWQA-AGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSAR--------DLLL-LSAICGVVRWGLMGS-TTALPWL 296 (382)
T ss_pred HHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH--------HHHH-HHHHHHHHHHHHHHh-hhhHHHH
Confidence 9999965 799999999999988899999999999999999876 3333 333333333333322 2333444
Q ss_pred HHHHHHHHHHhhhhhhhhhhHhhhccCccchhhhhhh
Q 011781 439 IVGILTAGLALSSFALSGLYCTHQDISPEYASILLYL 475 (477)
Q Consensus 439 ~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~g~~~gl 475 (477)
++..++.|.+.+... +......++.+++++++++|+
T Consensus 297 ~~~~~l~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 332 (382)
T PRK11128 297 IVIQILHCGTFTVCH-LAAMRYIAARPGSEVIRLQAL 332 (382)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHCCHhhhHHHHHH
Confidence 455566666655444 344444555677777777664
No 71
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.94 E-value=3.7e-26 Score=233.25 Aligned_cols=285 Identities=17% Similarity=0.174 Sum_probs=223.0
Q ss_pred HHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHH
Q 011781 117 GTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALL 196 (477)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 196 (477)
+.+++..+...+.....+..++.+.++++++..+.|++.+.+.+++.++.++.+++.||+|||+++.++.++++++.+++
T Consensus 36 ~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~ 115 (633)
T TIGR00805 36 LLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLL 115 (633)
T ss_pred HHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHH
Confidence 44444666666777888888999999999999999999999999999999999999999999999999999999999887
Q ss_pred HHhhc---------------------------------------------------hHHHHHHHHHHHHhhccchhhhHH
Q 011781 197 PLLAG---------------------------------------------------FMPGLVLSRVLVGIGEGVSPSAAT 225 (477)
Q Consensus 197 ~~~~~---------------------------------------------------~~~~~~~~~~l~g~~~~~~~~~~~ 225 (477)
+. ++ .+..++++|+++|+|.+..++...
T Consensus 116 al-phf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~ 194 (633)
T TIGR00805 116 SL-PHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGI 194 (633)
T ss_pred hC-hHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCc
Confidence 53 31 244677899999999999999999
Q ss_pred HHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhccc----------------------ChhHHHHHHHHHHHHHH
Q 011781 226 DLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL----------------------GWESVFYIFGLLGIAWF 283 (477)
Q Consensus 226 ~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~----------------------g~~~~~~~~~~~~~~~~ 283 (477)
+++.|++|+++|+++++++..+..+|.++|+++++++.+.+ +|+..|++.+++.++..
T Consensus 195 ~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~ 274 (633)
T TIGR00805 195 SYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTS 274 (633)
T ss_pred hhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999987543 27778888888887776
Q ss_pred HHHHHhccCCcCCCCCCC-CcchhhhhhhhhhhhHHhhccC--CCCCCHHHHhhcHHHHHHHHHHHHhHHHHHHHhhhhh
Q 011781 284 SGFKILQEGETSNGATLA-PRSNYINMKKSLSASLEEMGES--LKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLP 360 (477)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 360 (477)
+.+++++++.++.....+ +..+.....+............ .....++.+++||.++...+..++......++.+++|
T Consensus 275 v~l~~~p~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP 354 (633)
T TIGR00805 275 IPFFFFPKALPKEGKRVNVDVHETEKLEKSEDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYITFLP 354 (633)
T ss_pred HHHHhCccccCCcccccchhhhhhhcccccccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666666665432211100 0000000000000000000000 0012356789999999999999999999999999999
Q ss_pred HHHHHhhCCchhhhHHHHHHHHH-HHHHHHHhhhhchhHHHhc
Q 011781 361 TYFSEELSLNLTEAAWVSILPPL-ASVLVTSIAAQFADNLIAT 402 (477)
Q Consensus 361 ~~~~~~~g~~~~~~g~~~~~~~~-~~~~~~~~~g~l~dr~g~~ 402 (477)
.|+++.+|+++.+++++.+...+ +.+++.+++|+++||++.+
T Consensus 355 ~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~ 397 (633)
T TIGR00805 355 KYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLN 397 (633)
T ss_pred HHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeeccc
Confidence 99999999999999999888776 5688999999999999755
No 72
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.94 E-value=4.4e-24 Score=208.43 Aligned_cols=319 Identities=15% Similarity=0.039 Sum_probs=203.2
Q ss_pred HHHHHHHHHHhhhhHHHHhHHh-hhhhhCCCcchhhHHHHHHHH-HHHHhhhhhhhhhhhhcChhHHH-HHHHHHHHHHH
Q 011781 118 TTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFW-GYALSQLPGGWLAKIFGGRKVLQ-TGVLIWSLATA 194 (477)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~-~~~~~~~~~g~l~dr~g~r~~~~-~~~~~~~~~~~ 194 (477)
.+.+..++.........+.++. +.+++|.+.+++|++.+...+ +..++++++++ .||+|+|+.++ .+.++.+++..
T Consensus 19 ~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~ 97 (393)
T PRK15011 19 AFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACT 97 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHH
Confidence 3344466777777777777776 678899999999999876655 55566655555 99999998754 44455445555
Q ss_pred HHHHhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcch--hhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHH
Q 011781 195 LLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEER--SRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVF 272 (477)
Q Consensus 195 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~ 272 (477)
+.. ++++++.+++.+.+.+...+...|....++.++.++++| +...++.+.+.++|.++||++++.+.+++|||+.|
T Consensus 98 ~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f 176 (393)
T PRK15011 98 LFA-WNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMY 176 (393)
T ss_pred HHH-HhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHH
Confidence 553 566667666665555555567778888888887766555 34557888999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHH-hccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhc-HHHHHHHHHHHHhHH
Q 011781 273 YIFGLLGIAWFSGFKI-LQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRS-KAVWAMIYAHFCGSW 350 (477)
Q Consensus 273 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~ 350 (477)
++.+++.++..+.... +++.+++++.. +. +. + ...++ +..+...+..++...
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~-----------~------------~~~~~~~~~~~~~~~~~~~~~ 230 (393)
T PRK15011 177 LSAAVAFIVCGVMVWLFLPSMRKELPLA--TG-TL-----------E------------APRRNRRDTLLLFVICTLMWG 230 (393)
T ss_pred HHHHHHHHHHHHHHHhhcCccCCCCccc--cc-cc-----------c------------ccccccccHHHHHHHHHHHHH
Confidence 9988877766555443 44432211110 00 00 0 00011 222333333344444
Q ss_pred HHHHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhhhHHHHhhhcc
Q 011781 351 GHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSI 430 (477)
Q Consensus 351 ~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~~~~l~~~ 430 (477)
....+..+.|.|+++.+|++..+.+.+.+...++.+++.++.|+++||+++| +.... +.............
T Consensus 231 ~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~--------~~~~~-~~~~~~~~~~~~~~ 301 (393)
T PRK15011 231 TNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKR--------FLMRV-AAVAGVCFYAGMLM 301 (393)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH--------HHHHH-HHHHHHHHHHHHHH
Confidence 5556667899999888999999999888887888888999999999999887 33222 22222222222111
Q ss_pred cCCCchHHHHHHHHHHHHhhhhhhhhhhHhhhccCccchhhhhhh
Q 011781 431 DLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLYL 475 (477)
Q Consensus 431 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~g~~~gl 475 (477)
.++..+..+..++.+.+.+ ...+......++..|+++|+++|+
T Consensus 302 -~~~~~~~l~~~~l~~~~~g-~~~~~~~~~~~~~~p~~~g~~~~~ 344 (393)
T PRK15011 302 -AHSPAILLGLQLLNAIYIG-ILGGIGMLYFQDLMPGQAGSATTL 344 (393)
T ss_pred -HhhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCCCcchHHHH
Confidence 1222222322232333322 222333455567777889988775
No 73
>TIGR00898 2A0119 cation transport protein.
Probab=99.94 E-value=3.7e-25 Score=223.58 Aligned_cols=325 Identities=17% Similarity=0.135 Sum_probs=217.2
Q ss_pred HhHHhhhhhhCCC---cchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHH
Q 011781 135 VAIIPMSHRFGWN---SSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRV 211 (477)
Q Consensus 135 ~~~~~~~~~~g~s---~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (477)
...+.+.++++++ ..+.++..+++.++..++++++|+++||+|||++++++.++.+++.++.+ ++++++.+++.|+
T Consensus 110 ~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~r~ 188 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTA-FSPNYTVFLVFRL 188 (505)
T ss_pred cccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHH-HcccHHHHHHHHH
Confidence 4667889999999 89999999999999999999999999999999999999988888887774 6778899999999
Q ss_pred HHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHHHHHHHHHHHHHHHHHhcc
Q 011781 212 LVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQE 291 (477)
Q Consensus 212 l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 291 (477)
+.|++.+...+....++.|++|+++|+++.++...+..+|.+++|.+++.+.+ ||+.|++.++..++..+..++++|
T Consensus 189 l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~~~~~~~~~~~~e 265 (505)
T TIGR00898 189 LVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPTFLFFLLSWFVPE 265 (505)
T ss_pred HHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999999877653 999999999888777777777776
Q ss_pred CCcCCCCCCCCcchhhhhhh-----------h-hhhh-HHhhccCCCCCCHHHHhhcHHHHHHHHHHHHhHHHHHHHhhh
Q 011781 292 GETSNGATLAPRSNYINMKK-----------S-LSAS-LEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSW 358 (477)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~-----------~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 358 (477)
+++....+.+.++.....++ . .... .++.+++.++.++++++++|.++...+...+..+........
T Consensus 266 sp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (505)
T TIGR00898 266 SPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSYYG 345 (505)
T ss_pred ChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 54321111111100000000 0 0000 011111122346788999998887766655544443333333
Q ss_pred hhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhhhHHHHhhhcccCCCchHH
Q 011781 359 LPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWE 438 (477)
Q Consensus 359 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 438 (477)
++.+.. .++.+.. ......++..+++.++.+++.||+|+| +......++.+..++++.........+.
T Consensus 346 ~~~~~~-~~~~~~~---~~~~~~~~~~i~~~~~~~~l~dr~grr--------~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 413 (505)
T TIGR00898 346 LVLDLG-NLGGNIY---LDLFISGLVELPAKLITLLLIDRLGRR--------YTMAASLLLAGVALLLLLFVPVDLYFLR 413 (505)
T ss_pred Hhcccc-ccCCChH---HHHHHHHHHHHHHHHHHHHHHHHhCCH--------HHHHHHHHHHHHHHHHHHHcCCCchHHH
Confidence 333332 3455433 334455677888999999999999876 3333333332233232322221111222
Q ss_pred HHHHHHHHHHhhhhhhhhhhHhhhc-cCccchhhhhhhc
Q 011781 439 IVGILTAGLALSSFALSGLYCTHQD-ISPEYASILLYLE 476 (477)
Q Consensus 439 ~~~~~~~g~~~~~~~~~~~~~~~~~-~~p~~~g~~~gl~ 476 (477)
....++.+++.. ...+....+..+ .+++.|++++|+.
T Consensus 414 ~~~~~~~~~~~~-~~~~~~~~~~~e~~p~~~r~~~~g~~ 451 (505)
T TIGR00898 414 TALAVLGKFGIT-SAFQMVYLYTAELYPTVVRNLGVGVC 451 (505)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHhcccccHHHHhhhHhHH
Confidence 333333333333 333444455555 4555689888763
No 74
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.94 E-value=4.1e-24 Score=213.62 Aligned_cols=264 Identities=15% Similarity=0.154 Sum_probs=202.3
Q ss_pred HHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhh-----cChhH-HHHHHHHHHH
Q 011781 118 TTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIF-----GGRKV-LQTGVLIWSL 191 (477)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-----g~r~~-~~~~~~~~~~ 191 (477)
.+++..+..+.........+|.+.++.|.+..++|.. +.....+ ++.+++|+++||+ |||+. +..+.++.++
T Consensus 16 ~~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~ 93 (491)
T PRK11010 16 ILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLV 93 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHH
Confidence 4555556777788888888999999999999999997 4444444 5889999999999 99885 5566666656
Q ss_pred HHHHHHHhh--chHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhc-ccCh
Q 011781 192 ATALLPLLA--GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE-NLGW 268 (477)
Q Consensus 192 ~~~~~~~~~--~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~-~~g~ 268 (477)
+...+++.. ++++.+.+.+++.+++.+...+...+++.|++|+++|+++.++...+..+|.++++.+++++.+ ..||
T Consensus 94 ~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GW 173 (491)
T PRK11010 94 AIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGW 173 (491)
T ss_pred HHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCH
Confidence 655554332 4567788899999999999999999999999999999999999999999999999999999998 5799
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHHHHHHh
Q 011781 269 ESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCG 348 (477)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 348 (477)
|..|++.+++.++..+..++.+|+++..+ . +++. ++ ....++++.++++..|...+..++.
T Consensus 174 r~~f~i~a~l~ll~~l~~~~~~e~~~~~~-~---~~~~---~~------------~~~~~l~~~~~~~~~~~~ll~~~l~ 234 (491)
T PRK11010 174 QGMYWLMAALLIPCIIATLLAPEPTDTIP-V---PKTL---EQ------------AVVAPLRDFFGRNNAWLILLLIVLY 234 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCccccc-c---ccch---hh------------hHHHHHHHHHcCcCHHHHHHHHHHH
Confidence 99999999887776665555554332110 0 0000 00 0011345677777777766666666
Q ss_pred HHHHHHHhhhhhHHHHHhhCCchhhhHHHHH-HHHHHHHHHHHhhhhchhHHHhc
Q 011781 349 SWGHYTCLSWLPTYFSEELSLNLTEAAWVSI-LPPLASVLVTSIAAQFADNLIAT 402 (477)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~-~~~~~~~~~~~~~g~l~dr~g~~ 402 (477)
.........+.+.|+.+.+|++..+.+.+.. ...++.+++.+++|+++||+|+|
T Consensus 235 ~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~ 289 (491)
T PRK11010 235 KLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLF 289 (491)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 6666666778888887778999999999875 55678999999999999999976
No 75
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.94 E-value=1.3e-23 Score=192.47 Aligned_cols=326 Identities=17% Similarity=0.159 Sum_probs=258.6
Q ss_pred HHHHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHH
Q 011781 115 LIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATA 194 (477)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 194 (477)
.+..+...+++.++......+.+|.+.+.++++..+++++...+..++.+.+++.|++.+|+|+|+.+++++.++++++.
T Consensus 14 ~~v~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~ 93 (422)
T COG0738 14 AFVLLTSLFFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAA 93 (422)
T ss_pred HHHHHHHHHHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 34455566667778888889999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHH--hhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcc-------
Q 011781 195 LLPL--LAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN------- 265 (477)
Q Consensus 195 ~~~~--~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~------- 265 (477)
++.- ...++..+++..++.|.|.+....+.+.++..+.++++..+.+.+.+.++.+|.++||++++.+..+
T Consensus 94 lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~ 173 (422)
T COG0738 94 LFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMS 173 (422)
T ss_pred HHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccC
Confidence 8732 3456778889999999999999999999999999998899999999999999999999999988762
Q ss_pred ------------cChhHHHHHHHHHHHHHHHHHHHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHh
Q 011781 266 ------------LGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIF 333 (477)
Q Consensus 266 ------------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (477)
-.|+++|...+...++..+.....+.++.+.......+. +.....+++
T Consensus 174 ~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~~~~~~~~--------------------~~~~~~~l~ 233 (422)
T COG0738 174 AAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVAAPSLGAS--------------------GSAGLSSLF 233 (422)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCccccccccc--------------------ccchHHHHH
Confidence 137888888877776666665555433322221111110 011346899
Q ss_pred hcHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhh
Q 011781 334 RSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKIC 413 (477)
Q Consensus 334 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~ 413 (477)
++|+++...+..|++...+.....|++.|+.+..|.+..+++...+..+.+.++|++++.++..|+..+ |.+
T Consensus 234 ~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~--------k~L 305 (422)
T COG0738 234 QNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPE--------KYL 305 (422)
T ss_pred hChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH--------HHH
Confidence 999999999999999999999999999999987899999999999999999999999999999998665 555
Q ss_pred hHHhhhhhHHHHhhhcccCCCchHHHHHHHHHHHHhhhhhhhhhhHhhhccCccchhhh
Q 011781 414 QTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASIL 472 (477)
Q Consensus 414 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~g~~ 472 (477)
....+....+++...... ..+.+.+.+++|.+.+.+++.......+.++ ++....
T Consensus 306 af~a~~~ill~~~~~l~~---g~v~~~~l~~ig~F~simfPTIfslal~~l~-~~ts~~ 360 (422)
T COG0738 306 AFYALIAILLLLAVALIG---GVVALYALFLIGLFNSIMFPTIFSLALKNLG-EHTSVG 360 (422)
T ss_pred HHHHHHHHHHHHHHHHhc---ChHHHHHHHHHHHHhHHHHHHHHHHHHhccC-cccccc
Confidence 555544444444444332 3566677778888877666555555555555 554443
No 76
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.93 E-value=8.4e-24 Score=234.34 Aligned_cols=333 Identities=15% Similarity=0.102 Sum_probs=225.7
Q ss_pred HHHHHHHHHhhh-hHHHHhHHhhhhhhCCCc--chhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHH
Q 011781 119 TSLAFVICNMDK-VNLSVAIIPMSHRFGWNS--SVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATAL 195 (477)
Q Consensus 119 ~~~~~~~~~~~~-~~~~~~~~~~~~~~g~s~--~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 195 (477)
+++..++..+.. .......+.+..+++.+. ...+++.+++.++++++++++|+++||+|||++++++.++..+..++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~ 93 (1146)
T PRK08633 14 LLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLL 93 (1146)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHH
Confidence 334444444333 333444555656666554 44689999999999999999999999999999999887665554443
Q ss_pred HH--HhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcc--------
Q 011781 196 LP--LLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN-------- 265 (477)
Q Consensus 196 ~~--~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~-------- 265 (477)
.. ...++++.++++|++.|++.+...++..+++.+++|+++|++++|+...+..+|.++|+++++++.+.
T Consensus 94 ~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~ 173 (1146)
T PRK08633 94 IVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSE 173 (1146)
T ss_pred HHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccc
Confidence 32 23466789999999999999999999999999999999999999999999999999999999999875
Q ss_pred c-ChhHHHHHHHHHHH-HHHHHHHHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHH
Q 011781 266 L-GWESVFYIFGLLGI-AWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIY 343 (477)
Q Consensus 266 ~-g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 343 (477)
+ +|.+.+.+.++... +.+++.+.+++.+....... ++..... .+ . ....++.+++++.++...+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~---~---------~~~~~~~l~~~~~~~~~~~ 239 (1146)
T PRK08633 174 ILGRIAPAGLVLLAVAVLGLIFAYRLPKVPAAAPEVF-DKKKYLF-PK---L---------LWRNLKLLRSDRVLWLAII 239 (1146)
T ss_pred cccchHHHHHHHHHHHHHHHHHHhcCcCCCCCCcccc-ccccccc-HH---H---------HHHHHHHHhcCcHHHHHHH
Confidence 2 34444444433332 23333344444332211110 0000000 00 0 0112466788888888877
Q ss_pred HHHHhHHHHHHHhhhhhHHHHHhhCCchh-hhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhhhH
Q 011781 344 AHFCGSWGHYTCLSWLPTYFSEELSLNLT-EAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPA 422 (477)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~ 422 (477)
..++..+.......++|.|+.+.+|++.. ..+++.+...++.+++.++.+++.||++++ +...+ +.+..+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~--------~~~~~-~~~~~~ 310 (1146)
T PRK08633 240 GLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIEL--------GLVPL-GALGLA 310 (1146)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEc--------cchhH-HHHHHH
Confidence 77777777777888999999988999998 999999999999999999999999998765 22222 222222
Q ss_pred HHHhhhcccCCCchHHHHHHHHHHHHhhhhhhhhhhHhhhccCccchhhhhhh
Q 011781 423 VCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLYL 475 (477)
Q Consensus 423 ~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~g~~~gl 475 (477)
++++++... .+..+.++.++++|++.+....+....+....+++++|+++|+
T Consensus 311 ~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~ 362 (1146)
T PRK08633 311 LSLFLLPTA-PSLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAA 362 (1146)
T ss_pred HHHHHHHHh-hhHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHH
Confidence 222222221 2333444556666666555554444444455667779998875
No 77
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.93 E-value=2.9e-23 Score=203.37 Aligned_cols=263 Identities=14% Similarity=0.063 Sum_probs=200.7
Q ss_pred HHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhh-----cChh-HHHHHHHHHHHH
Q 011781 119 TSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIF-----GGRK-VLQTGVLIWSLA 192 (477)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-----g~r~-~~~~~~~~~~~~ 192 (477)
+...++.++.........+|.+.++.|+|.+++|++..+... .+..+++|+++||+ |||| ++..+.++.+++
T Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~ 81 (402)
T PRK11902 4 MLLLGFASGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAAS 81 (402)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHH
Confidence 345567778888888999999999999999999999776665 58999999999999 7775 677777777666
Q ss_pred HHHHHHhh--chHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcc-cChh
Q 011781 193 TALLPLLA--GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN-LGWE 269 (477)
Q Consensus 193 ~~~~~~~~--~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~-~g~~ 269 (477)
...+.... .+++.+++..++.+++.+...++..+++.+++|+++|+++.++...+..+|.++++.+++.+.+. .|||
T Consensus 82 ~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~ 161 (402)
T PRK11902 82 IAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWG 161 (402)
T ss_pred HHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHH
Confidence 66654332 34566777778888888889999999999999999999999999999999999999999999885 5999
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHHHHHHhH
Q 011781 270 SVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGS 349 (477)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 349 (477)
..|++.+++.++..+..++.+|++.+++++ + +. .+. ...++++++++|.++.+++..++..
T Consensus 162 ~~f~i~a~~~l~~~l~~~~~~e~~~~~~~~--~--~~---~~~------------~~~~~~~l~~~~~~~~~l~~~~l~~ 222 (402)
T PRK11902 162 NTYLLMAGLMLAGALTTLWAPEPEVPARPP--R--SL---GEA------------VVGPLRDFFSRRGAWALLLLIVLYK 222 (402)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCccccccc--c--hh---HHH------------HHHHHHHHHhCcCHHHHHHHHHHHH
Confidence 999998887776655555555443221110 0 00 000 0113567889999888777666665
Q ss_pred HHHHHHhhhhhHHHHHhhCCchhhhHHHHHHHH-HHHHHHHHhhhhchhHHHhc
Q 011781 350 WGHYTCLSWLPTYFSEELSLNLTEAAWVSILPP-LASVLVTSIAAQFADNLIAT 402 (477)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~-~~~~~~~~~~g~l~dr~g~~ 402 (477)
........+.+.++.+.+|+++.+.+++....+ ++.+++.++++++.||+++|
T Consensus 223 ~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~ 276 (402)
T PRK11902 223 LGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLY 276 (402)
T ss_pred hHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 554444445566676778999999998876655 45889999999999999876
No 78
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.92 E-value=1.9e-22 Score=200.55 Aligned_cols=357 Identities=13% Similarity=0.092 Sum_probs=234.3
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHhHHhhh-hh--hCCCcchhhHHHHHHHHHHHHhhhhhhhhhhh-hcChhHHHHHHHHH
Q 011781 114 KLIGTTSLAFVICNMDKVNLSVAIIPMS-HR--FGWNSSVAGLVQSSFFWGYALSQLPGGWLAKI-FGGRKVLQTGVLIW 189 (477)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~ 189 (477)
+.+..++...+...+......+.+|.+. ++ +|++..+.|++.+.+.++..++++++|+++|| +|||+++.++.++.
T Consensus 10 ~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~ 89 (475)
T TIGR00924 10 KPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVL 89 (475)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHH
Confidence 4455566666677777777777777654 44 89999999999999999999999999999999 89999999999999
Q ss_pred HHHHHHHHHhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcc---hhhHHHHHHhhhhhHHHHHHhhhHHhhccc
Q 011781 190 SLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEE---RSRAVSFVFGGLSFGSVAGLLLAPPIIENL 266 (477)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~---r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~ 266 (477)
+++.++++ .+++.+.+++.+++.|++.+...+...+++++++|+++ |++++++.+.+.++|.++||.+++++.++.
T Consensus 90 ~~g~~~~~-~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~ 168 (475)
T TIGR00924 90 MLGHFMLA-MSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENY 168 (475)
T ss_pred HHHHHHHH-hcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99888775 55566778889999999999999999999999998754 888999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHhccCCcCCCCCC---CCcchhhhhh-h------------hhh--hh------------
Q 011781 267 GWESVFYIFGLLGIAWFSGFKILQEGETSNGATL---APRSNYINMK-K------------SLS--AS------------ 316 (477)
Q Consensus 267 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~------------~~~--~~------------ 316 (477)
||++.|++.++..++..+.+...++..++.+++. .++++..... . ... +.
T Consensus 169 g~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (475)
T TIGR00924 169 GYHVGFNLAAVGMVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLALLAALALVFFCAWLMHHVVIANILLMTVTL 248 (475)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 9999999988665555444444332211111000 0000000000 0 000 00
Q ss_pred ------HHhhccCCCCCCHHHHhhcHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHhhCCchhh----hHHHHHHHHHHHH
Q 011781 317 ------LEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTE----AAWVSILPPLASV 386 (477)
Q Consensus 317 ------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~----~g~~~~~~~~~~~ 386 (477)
.+...+ +.....+-.|...+..+++..+++...+....+.++.+.++..+.+... .+++.+...+..+
T Consensus 249 ~~~~~~~~~~~~--~~~~~~~~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~ii 326 (475)
T TIGR00924 249 AVIIFFFRLAFK--PRLDAVARNKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVV 326 (475)
T ss_pred HHHHHHHHHHHh--ccCCHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHH
Confidence 000000 0111111122234455566666777777777888888887654444322 6678888888888
Q ss_pred HHHHhhhhchhHHHhcCcccceehhhhhHHhhhhhHHHHhhhcc--------cCCCchHHHHHHHHHHHHhhhhhhhhhh
Q 011781 387 LVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSI--------DLGLPHWEIVGILTAGLALSSFALSGLY 458 (477)
Q Consensus 387 ~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~~~~l~~~--------~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 458 (477)
+..++..++-.|..+|+.+.....| ..+++++.+++.....+ ...+.+|.++..++.+.+-.... +...
T Consensus 327 l~~p~~~~~~~~l~~~~~~~~~~~k--~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~-p~~~ 403 (475)
T TIGR00924 327 VGSPVLAMIWTRLGRKGKDPTTPLK--FTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMIS-PLGL 403 (475)
T ss_pred HHHHHHHHHHHHHHhCCCCCCcHHH--HHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHh-HHHH
Confidence 8877766666666665322221122 23334443333333221 12344566666777777755555 4555
Q ss_pred Hhhhc-cCccchhhhhhhc
Q 011781 459 CTHQD-ISPEYASILLYLE 476 (477)
Q Consensus 459 ~~~~~-~~p~~~g~~~gl~ 476 (477)
....+ .|++.||+++|+.
T Consensus 404 ~~~~~~aP~~~~g~~~g~~ 422 (475)
T TIGR00924 404 SWWTKIAPQRLMGQMLGMW 422 (475)
T ss_pred HHHHHhCCHHHHHHHHHHH
Confidence 55555 4556699999864
No 79
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.92 E-value=4e-23 Score=203.85 Aligned_cols=353 Identities=17% Similarity=0.168 Sum_probs=262.1
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHH
Q 011781 113 YKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLA 192 (477)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 192 (477)
|.++...+++..........++.+.+.+.++++.+..+++|+.++......+..++.+.+.||+|.|.+.++|.++.+++
T Consensus 45 WvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g 124 (509)
T KOG2504|consen 45 WVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALG 124 (509)
T ss_pred eeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHH
Confidence 45555555666666666667778889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhchHHH-HHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHH
Q 011781 193 TALLPLLAGFMPG-LVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESV 271 (477)
Q Consensus 193 ~~~~~~~~~~~~~-~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~ 271 (477)
.++.. +++++|. ++..-++.|+|.+..+......+..+++ ++|+.++|+...+.++|.++-|.+...+.+.+|||+.
T Consensus 125 ~~lss-F~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~-kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~ 202 (509)
T KOG2504|consen 125 LLLSS-FATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFE-KKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGA 202 (509)
T ss_pred HHHHH-HHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHhH-HHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHH
Confidence 98885 5555555 4556799999999999999999998887 8999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhccCCcCCCCC--------------------CCCcchhhhhhh---hhhhhHHhhccCC----
Q 011781 272 FYIFGLLGIAWFSGFKILQEGETSNGAT--------------------LAPRSNYINMKK---SLSASLEEMGESL---- 324 (477)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~---~~~~~~~~~~~~~---- 324 (477)
+++.+.+.+-..+....+++......+. .....+.....+ ......++.+.+.
T Consensus 203 ~l~~~~~~l~~~~~~~~~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (509)
T KOG2504|consen 203 LLIFGGISLNVLVAGALLRPLSPPKKPNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSP 282 (509)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCcCCCchhhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCccccccc
Confidence 9999988876666666655422221100 000000000000 0000001111111
Q ss_pred -CCCCH---HHHhhcHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHH
Q 011781 325 -KDVPW---KAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLI 400 (477)
Q Consensus 325 -~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g 400 (477)
+.... .+++++|.++.+.+...+...++.....++|.|.. ..|++..+++.+.++.++..++++++.|+++|+..
T Consensus 283 ~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~-~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~ 361 (509)
T KOG2504|consen 283 LQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAK-SLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPG 361 (509)
T ss_pred hhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccc
Confidence 11111 57899999999999999999999999999999998 58999999999999999999999999999999986
Q ss_pred hcCcccceehhhhhHHhhhhhHHHHhhhcccCCCchHHHHHHHHHHHHhhhhhhhhhhHhhhccCccchhhhhhhc
Q 011781 401 ATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLYLE 476 (477)
Q Consensus 401 ~~~~~~~~~r~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~g~~~gl~ 476 (477)
.+ ++.+..++++..++..+..... .+...+.....++|+..+.+.......+...+..++-..++|+.
T Consensus 362 ~~-------~~~~~~~~ll~~gl~~~~~p~~-~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~ 429 (509)
T KOG2504|consen 362 IR-------ALVLFLLTLLIAGLARLFLPFA-TTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLL 429 (509)
T ss_pred cc-------hHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHH
Confidence 43 3455555555555554443332 22334555666777776666654445566667777777777764
No 80
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.92 E-value=1.1e-22 Score=198.90 Aligned_cols=270 Identities=12% Similarity=0.036 Sum_probs=193.9
Q ss_pred HHHHHHHHHHHHhhhhHHHHhHHhh-hhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHH
Q 011781 116 IGTTSLAFVICNMDKVNLSVAIIPM-SHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATA 194 (477)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 194 (477)
++.+....++.......+.+++|.+ .+++|.++.+.|++.+++.++..++++++|+++||+|||+.++.+....+++..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~ 83 (396)
T TIGR00882 4 FWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFA 83 (396)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 3445556667777788888887774 567899999999999999999999999999999999999999877665544333
Q ss_pred HHHH--hh-----chHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccC
Q 011781 195 LLPL--LA-----GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG 267 (477)
Q Consensus 195 ~~~~--~~-----~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g 267 (477)
.... .. +.+..+++.+++.|++.+...+....+..+..+ +++..+|......++|.++||.++|.+.+ .+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-~~ 160 (396)
T TIGR00882 84 PFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR--NSNFEYGKARMFGCVGWALCASIAGILFS-ID 160 (396)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhh--hcccccchhhhhcccHHHHHHHHHhhhhc-cC
Confidence 2211 11 223345667888899888888888888777543 34567788888899999999999998865 59
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHHHHHH
Q 011781 268 WESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFC 347 (477)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 347 (477)
|++.|++.+++.++..+..+...++++++++. .+..+ ..+++.+..++++++|+|.++.+.+..++
T Consensus 161 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-------------~~~~~~~~~~~~~~l~~~~~~~~~l~~~~ 226 (396)
T TIGR00882 161 PQIVFWLGSGFALILMLLLMFAKPKAPSSATV-ANALG-------------ANASAFSLKLALELFRQRKFWMFVLYVVG 226 (396)
T ss_pred chHHHHHHHHHHHHHHHHHHHhCCCCchhhhh-hcccc-------------cccCCCCHHHHHHHHcCCcHHHHHHHHHH
Confidence 99999998888777665555443332211100 00000 00001111235678899998877777666
Q ss_pred hHHHHHHHhhhhhHHHHHhh---CCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhc
Q 011781 348 GSWGHYTCLSWLPTYFSEEL---SLNLTEAAWVSILPPLASVLVTSIAAQFADNLIAT 402 (477)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~---g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~ 402 (477)
....+.....+.+.|+.+.+ +.+....|.+.+...+...++....+++.||+|+|
T Consensus 227 ~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~ 284 (396)
T TIGR00882 227 VACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAK 284 (396)
T ss_pred HHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 66666666677888887654 45566778888888899999999999999999877
No 81
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.92 E-value=4.6e-22 Score=197.90 Aligned_cols=358 Identities=13% Similarity=0.101 Sum_probs=228.7
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHh-HHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhh-hcChhHHHHHHHHHHH
Q 011781 114 KLIGTTSLAFVICNMDKVNLSVA-IIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKI-FGGRKVLQTGVLIWSL 191 (477)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~ 191 (477)
+-+..++...+...+........ ..++.+++|.+..+.+++.+.+.....+..+++|+++|| +|||+++.++.+++++
T Consensus 14 ~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~ 93 (489)
T PRK10207 14 RPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAI 93 (489)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHH
Confidence 44445555555555555555544 445678899999999999999998888889999999999 9999999999999999
Q ss_pred HHHHHHHhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCc--chhhHHHHHHhhhhhHHHHHHhhhHHhhcccChh
Q 011781 192 ATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLE--ERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWE 269 (477)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~ 269 (477)
+.+++....+....+++.|+++|+|.+...|...+++.|.+|++ +|++++++++.+.++|.++||.+++++.++.|||
T Consensus 94 g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~ 173 (489)
T PRK10207 94 GYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYS 173 (489)
T ss_pred HHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChH
Confidence 98887543332334568899999999999999999999999876 4577999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCcCCC----CCCCCcchhhh-----------hhhhhh--hhHH-------------h
Q 011781 270 SVFYIFGLLGIAWFSGFKILQEGETSNG----ATLAPRSNYIN-----------MKKSLS--ASLE-------------E 319 (477)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~-----------~~~~~~--~~~~-------------~ 319 (477)
+.|++.++..++..+.+...++..++.. +.+.+..+... ...... .... -
T Consensus 174 ~~F~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f 253 (489)
T PRK10207 174 VTYNLCGAGLIIALLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHNVEVANLVLIVLSIVVTIIF 253 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHcchhhcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Confidence 9999976544444433333332211110 00001001000 000000 0000 0
Q ss_pred hccCCCCCCHHHHhhcHHHHHHHH--HHHHhHHHHHHHhhhhhHHHHHhhCCch----hhhHHHHHHHHHHHHHHHHhhh
Q 011781 320 MGESLKDVPWKAIFRSKAVWAMIY--AHFCGSWGHYTCLSWLPTYFSEELSLNL----TEAAWVSILPPLASVLVTSIAA 393 (477)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~~~~~~g~~~----~~~g~~~~~~~~~~~~~~~~~g 393 (477)
..+..+ . .+..|+|.+....+ ...+....+....+.++.|.++..+.+. ...+.+.....+..++..++.+
T Consensus 254 ~~~~~~-~--~~~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~ 330 (489)
T PRK10207 254 FREAFK-L--DKTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILA 330 (489)
T ss_pred HHHHhc-C--CHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHH
Confidence 000000 0 14556665544332 2444555566666778888865333211 1223444555666777788889
Q ss_pred hchhHHHhcCcccceehhhhhHHhhhhhHHHHhh------hcc--cCC-CchHHHHHHHHHHHHhhhhhhhhhhHhhhcc
Q 011781 394 QFADNLIATGVETTMVRKICQTIAFLSPAVCMTL------SSI--DLG-LPHWEIVGILTAGLALSSFALSGLYCTHQDI 464 (477)
Q Consensus 394 ~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~~~~l------~~~--~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 464 (477)
++.||+++|+.+.....+... ++++.+++++. ... ... +.+|.+...++.+.+.....++.........
T Consensus 331 ~l~~rl~~r~~~~~~~~k~~~--G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~a 408 (489)
T PRK10207 331 GIYTHLGSKGKDLSMPMKFTL--GMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALV 408 (489)
T ss_pred HHHHHHhhCCCCCCcHHHHHH--HHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhC
Confidence 999999988654443434333 22222222211 111 112 2345556677778887777777777777778
Q ss_pred Cccchhhhhhhc
Q 011781 465 SPEYASILLYLE 476 (477)
Q Consensus 465 ~p~~~g~~~gl~ 476 (477)
|++.+|.++|+.
T Consensus 409 P~~~~g~~~g~~ 420 (489)
T PRK10207 409 PQHLMGFILGMW 420 (489)
T ss_pred hHHHHHHHHHHH
Confidence 888899999863
No 82
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.92 E-value=4.4e-23 Score=203.36 Aligned_cols=330 Identities=11% Similarity=0.017 Sum_probs=202.7
Q ss_pred HHHHHHHHHHhhhhHHHHhHHh-hhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHH
Q 011781 118 TTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALL 196 (477)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 196 (477)
.+.+..++.......+.+++|. +.+++|+++.++|++.+++.++..++++++|+++||+|||+++.++..+.+++....
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~ 93 (420)
T PRK09528 14 IFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPF 93 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHH
Confidence 3344555555666666777666 455699999999999999999999999999999999999999987665554443221
Q ss_pred HH--hhc-----hHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChh
Q 011781 197 PL--LAG-----FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWE 269 (477)
Q Consensus 197 ~~--~~~-----~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~ 269 (477)
.. ... .+...++.+++.|.+.....+....+..+. .++++..+|......++|.+++|.+++.+.+ .+|+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~-~~~~ 170 (420)
T PRK09528 94 FIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIERV--SRRSGFEYGRARMWGSLGWALCAFIAGILFN-INPQ 170 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHHH--HhhccccchhhHHhhhHHHHHHHHHHHHHHh-cCch
Confidence 11 111 111122334444444444444444443332 2456778899999999999999999999876 4899
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHHHHHHhH
Q 011781 270 SVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGS 349 (477)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 349 (477)
+.|++.+++.++..+..++.+++++++....+++++. +++......+..+|+|.+|.+.+..++..
T Consensus 171 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~l~~~~~~~l~l~~~~~~ 236 (420)
T PRK09528 171 INFWLGSGSALILLVLLFFAKPDAPSTAKVANALGAN--------------ASAVSLKDALALLKLPKFWFLVLYVIGVA 236 (420)
T ss_pred HhHHHHHHHHHHHHHHHhcccccccchhhhccchhcc--------------cccccHHHHHHHccCCCeEeehHHHHHHH
Confidence 9999988877776666555544332211100000000 00000112346778888877666555555
Q ss_pred HHHHHHhhhhhHHHHHhh---CCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhhhHHHHh
Q 011781 350 WGHYTCLSWLPTYFSEEL---SLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMT 426 (477)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~---g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~~~~ 426 (477)
..+.....+.|.|+.+.+ +.+....|.+.+...++..++.+++|++.||+|+| +...... ++..+...
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~--------~~~~~~~-~l~~~~~~ 307 (420)
T PRK09528 237 CFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAK--------NALLLAG-TIMAVRII 307 (420)
T ss_pred HHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc--------hhhHHHH-HHHHHHHH
Confidence 555555666787776543 45667788899999999999999999999999987 3333222 22222322
Q ss_pred hhcccCCCchHHHHHHHHHHHHhhhhhhhhhhHhhhccCccchhhhhh
Q 011781 427 LSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLY 474 (477)
Q Consensus 427 l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~g~~~g 474 (477)
+..+ .++..+.+....+.+...............+..+++.+++..+
T Consensus 308 l~~~-~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 354 (420)
T PRK09528 308 GSGF-ATGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYL 354 (420)
T ss_pred HHHh-cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeee
Confidence 2222 2233334444444454443333333333444566666776643
No 83
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.92 E-value=3.1e-22 Score=189.93 Aligned_cols=337 Identities=12% Similarity=0.001 Sum_probs=233.7
Q ss_pred hhhhHHHHhHHhhhhhhCCCcch-hhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhchHHHH
Q 011781 128 MDKVNLSVAIIPMSHRFGWNSSV-AGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGL 206 (477)
Q Consensus 128 ~~~~~~~~~~~~~~~~~g~s~~~-~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (477)
-.....+...|.+.+++|++..+ .|.+.+++..+++++.++.|+++||+|.|+++.++.+.+++..++.+ +++++..+
T Consensus 40 e~R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~-fa~Sl~~L 118 (511)
T TIGR00806 40 QFRPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLL-LGTSVWHM 118 (511)
T ss_pred HhhchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 34677888899999999999999 99999999999999999999999999999999999999999998886 56678999
Q ss_pred HHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHHHH---HHHHHHHH
Q 011781 207 VLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIF---GLLGIAWF 283 (477)
Q Consensus 207 ~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~~---~~~~~~~~ 283 (477)
.+.|++.|++.|... +...++..++|+++|+++.|+..++..+|.+++++++++ ...+|||+.+.+. .....+++
T Consensus 119 ~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln~Isl~s~~~a~ 196 (511)
T TIGR00806 119 QLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYSTLNIISLVFMTFSV 196 (511)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHHHHHHHHHHHHHHH
Confidence 999999999999999 999999999999999999999999999999999999999 5578998765543 23334456
Q ss_pred HHHHHhccCCcCCCCCCCC--------cchhhhhhhhhhhhHHhhcc------CCCCCCHHHHhhcHHHHHHHHHHHHhH
Q 011781 284 SGFKILQEGETSNGATLAP--------RSNYINMKKSLSASLEEMGE------SLKDVPWKAIFRSKAVWAMIYAHFCGS 349 (477)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~~~~~ 349 (477)
++.+++|.+++.--..+.+ +.+....+.. ....+..+. ..-...++...+||.+....+-..+..
T Consensus 197 ~~a~~LP~~~~sl~f~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~y~n~~vl~WSlWwa~a~ 275 (511)
T TIGR00806 197 FLALFLKRPKRSLFFNRLEDVRGALPCELDQMVPGPG-GKLEDYLGTCRDSFLVRMLSELVTIYRNPQLLLWSLWWVFNS 275 (511)
T ss_pred HHHHhCCCCchhhhhccccccccccccccccCCCCCc-cccchhhhhhhhHHHHHHHHHHHHHhcCcchhhhhHHHHHHh
Confidence 6666776444311000000 0000000000 000000000 000122445567888877777777777
Q ss_pred HHHHHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhhhHHHHhhhc
Q 011781 350 WGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSS 429 (477)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~~~~l~~ 429 (477)
+++....+|......+.-+-....-|.+-++..+.+.++.+..|++-.++.+. ....+.+..++-+.+++++.
T Consensus 276 ~g~~qv~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w~~~-------~~l~l~v~s~~~~gll~~m~ 348 (511)
T TIGR00806 276 AGYYLITYYVHTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIRWARW-------SKLLIAVVSAIQAGLVFWMS 348 (511)
T ss_pred hHHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCCchhh-------HHHHHHHHHHHHHHHhhhhh
Confidence 78888777777776553231223567788888888888999999886655322 12222232233333333333
Q ss_pred ccCCCchHHHHHHHHHHHHhhhhhhhhhhHhhhccCccchhhhhhhc
Q 011781 430 IDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLYLE 476 (477)
Q Consensus 430 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~g~~~gl~ 476 (477)
. .++.+...+..++++..+.........-+...+..+.-|-++|++
T Consensus 349 ~-t~~Iw~~Y~~yvlf~~~y~flitia~~~iA~~L~~~~~aLvFGiN 394 (511)
T TIGR00806 349 Q-SHDIWVLYVTYVLFRGIYQFLVPIATFQIASSLSKELCALVFGIN 394 (511)
T ss_pred c-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccceEEEEecH
Confidence 2 234444456666677776666666666677777777788888874
No 84
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.92 E-value=3.8e-22 Score=180.07 Aligned_cols=317 Identities=20% Similarity=0.200 Sum_probs=244.8
Q ss_pred HHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhh
Q 011781 121 LAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLA 200 (477)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~ 200 (477)
+..+..--....+++.++.+.+++|+|.+.+|++.++..+...+.+++..++.+|+|.++.+..++++.+++.++-...
T Consensus 19 lia~NLR~~itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~- 97 (395)
T COG2807 19 LIAFNLRPAITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG- 97 (395)
T ss_pred HHHhccchhhhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-
Confidence 3333333567788899999999999999999999999999999999999999999999999999999999998887533
Q ss_pred chHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhccc-ChhHHHHHHHHHH
Q 011781 201 GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL-GWESVFYIFGLLG 279 (477)
Q Consensus 201 ~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~-g~~~~~~~~~~~~ 279 (477)
+.+.++....+.|.+.+.......+++-+.+| ++-+..+|+|++..++|+.+++.+.-.+.++. |||..+.+.++.+
T Consensus 98 -~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~a 175 (395)
T COG2807 98 -GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLA 175 (395)
T ss_pred -cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHH
Confidence 45788999999999999999999999999998 78899999999999999999999999998887 7999999999999
Q ss_pred HHHHHHHHHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHHHHHHhHHHHHHHhhhh
Q 011781 280 IAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWL 359 (477)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 359 (477)
++.++.++-...++....... +..+-..++|+|.-|.+.+.+.+....++....|+
T Consensus 176 llAl~~WlPq~~r~~~~~~~~------------------------~~~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WL 231 (395)
T COG2807 176 LLALLIWLPQALREQAASIAT------------------------KLVSVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWL 231 (395)
T ss_pred HHHHHHHhhhccccccccccc------------------------ccccccccccCchhHHHHHHHHhhHHHHHHHHHHH
Confidence 888877765432111111000 01112468999999999999999999999999999
Q ss_pred hHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhhhHHHHhhhcccCCCchHHH
Q 011781 360 PTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEI 439 (477)
Q Consensus 360 ~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 439 (477)
|.++.| .|+|..++|.+.+...+..+...+..+.+.+|..++ |...........+..+-+...+ ...++..
T Consensus 232 P~ili~-~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~-------r~~~~~~~~~~l~G~~G~~~~P-~~~~~lw 302 (395)
T COG2807 232 PAILID-RGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQ-------RPLVVLALLLMLVGLVGLLLAP-GQLPILW 302 (395)
T ss_pred HHHHHH-cCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhccc-------chHHHHHHHHHHHHHHHHHHhh-hhHHHHH
Confidence 999987 699999999999999999999999999999996555 3333332222222222222232 2223322
Q ss_pred HHHHHHHHHhhhhhhhhhhHhhhcc-Cccchhhhhhh
Q 011781 440 VGILTAGLALSSFALSGLYCTHQDI-SPEYASILLYL 475 (477)
Q Consensus 440 ~~~~~~g~~~~~~~~~~~~~~~~~~-~p~~~g~~~gl 475 (477)
.+++|.+.++.+......+..+. .|+..++..|+
T Consensus 303 --~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgm 337 (395)
T COG2807 303 --ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGM 337 (395)
T ss_pred --HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHH
Confidence 46677776655555554444443 35555555544
No 85
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.91 E-value=1.2e-21 Score=193.48 Aligned_cols=341 Identities=15% Similarity=0.138 Sum_probs=229.9
Q ss_pred HHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhchHHH
Q 011781 126 CNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPG 205 (477)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (477)
.++.....+..++.+..++|- .....|+.+...++..+..++.|+++|.+|||..++.+.++..++.++.+ .+++...
T Consensus 56 ~~~~~~~~a~~l~~I~~diG~-~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~a-tA~~~~~ 133 (599)
T PF06609_consen 56 AYFVLVLPASILPYINADIGG-SDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCA-TAQNMNT 133 (599)
T ss_pred HHHHHhccHHHHHHHHHhcCC-CccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhh-cCCcHHH
Confidence 334445556667889999995 46778999999999999999999999999999999999999999998885 7888899
Q ss_pred HHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHHHHHHHHHHHHHH
Q 011781 206 LVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSG 285 (477)
Q Consensus 206 ~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~ 285 (477)
++++..+.|+|.|... .....++|..|.+.|+...++..........++|.++..+..+.+|||.|++.+++..+.++.
T Consensus 134 ~iag~~l~GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl 212 (599)
T PF06609_consen 134 FIAGMVLYGVGAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVL 212 (599)
T ss_pred HHHHHHHHHHhhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHH
Confidence 9999999999976665 456668999999999888877776666666678888877776779999999998887776555
Q ss_pred HHHhccCCcCCCC--CCC-Ccchhhhhhh-------------------------hhhhhH-----------------Hhh
Q 011781 286 FKILQEGETSNGA--TLA-PRSNYINMKK-------------------------SLSASL-----------------EEM 320 (477)
Q Consensus 286 ~~~~~~~~~~~~~--~~~-~~~~~~~~~~-------------------------~~~~~~-----------------~~~ 320 (477)
.+++..+++++.. ++. .++...+.+- .+.+.. -|.
T Consensus 213 ~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv~F~~wE~ 292 (599)
T PF06609_consen 213 IFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLVAFVVWEW 292 (599)
T ss_pred HHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHHHHHHhhh
Confidence 4444333332211 111 1111111000 000000 011
Q ss_pred ccC-CCCCCHHHHhhc-HHHHHHHHHHHHhHHHHHHHhhhhhHHHHHhhCCchh---hhHHHHHHHHHHHHHHHHhhhhc
Q 011781 321 GES-LKDVPWKAIFRS-KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLT---EAAWVSILPPLASVLVTSIAAQF 395 (477)
Q Consensus 321 ~~~-~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~g~~~~~~~~~~~~~~~~~g~l 395 (477)
... ....--.+++|+ |.+...++..++....++....+.|......++-++. ..++.....+++..++.++.|.+
T Consensus 293 ~~~~~~Pl~P~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l 372 (599)
T PF06609_consen 293 FGAPKDPLFPHRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLL 372 (599)
T ss_pred hccCCCCcCCHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHH
Confidence 111 111112467787 5566666777777878888888999988777776653 56777788888888999999999
Q ss_pred hhHHHhcCcccceehhhhhHHhhhhhHHHHhhhcccCCCchHHHHHHHHHHHHhhhhhhhhhhHhhhccCccchhhhhhh
Q 011781 396 ADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLYL 475 (477)
Q Consensus 396 ~dr~g~~~~~~~~~r~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~g~~~gl 475 (477)
..++++- |..++....+..+.+-++.....++....+...++.|++.+....+......-..++++.|++.|+
T Consensus 373 ~~~ir~~-------Kw~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL 445 (599)
T PF06609_consen 373 FSKIRHI-------KWQLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGL 445 (599)
T ss_pred HHHccch-------hHHHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHH
Confidence 9887644 333333333333332333344444444444555566666666555554444445667779999887
Q ss_pred c
Q 011781 476 E 476 (477)
Q Consensus 476 ~ 476 (477)
+
T Consensus 446 ~ 446 (599)
T PF06609_consen 446 T 446 (599)
T ss_pred H
Confidence 5
No 86
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.91 E-value=2.5e-21 Score=189.00 Aligned_cols=264 Identities=11% Similarity=0.035 Sum_probs=198.5
Q ss_pred HHHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHH--HHHHHHHHHHhhhhhhh-hhhhhcChhHHHHHHHHH-HH
Q 011781 116 IGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLV--QSSFFWGYALSQLPGGW-LAKIFGGRKVLQTGVLIW-SL 191 (477)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~--~~~~~~~~~~~~~~~g~-l~dr~g~r~~~~~~~~~~-~~ 191 (477)
+..+...++.++.......+.+|.+.++.|.+.+++|+. .++..+...+.+++++. ..||+||||.+++...+. ++
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~ 82 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSA 82 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHH
Confidence 456667778888999999999999999999999999997 46678888788888854 789999999876554332 21
Q ss_pred HHHHHHHh--h-chHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccCh
Q 011781 192 ATALLPLL--A-GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGW 268 (477)
Q Consensus 192 ~~~~~~~~--~-~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~ 268 (477)
....+... . .....++...++.++..+...+...++..+..++++++...+....+..+|.++|+.+.+++.+.+||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw 162 (390)
T TIGR02718 83 CLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQ 162 (390)
T ss_pred HHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCH
Confidence 12222111 1 21233445556666777778888888888888888888888888888899999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHHHHHHh
Q 011781 269 ESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCG 348 (477)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 348 (477)
|..|++.+++.++..+..++++++++++++. ++ + ...++++.+|+|.++...+..++.
T Consensus 163 ~~~f~~~a~l~~~~~~~~~~~~~~~~~~~~~--~~-~-------------------~~~~~~~~l~~~~~~~~~~~~~l~ 220 (390)
T TIGR02718 163 RPAFLLVACVPLASLVCVLWLKDRAVASPEA--PL-A-------------------RRASLFRFFRRPLAWSLLALALLS 220 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcCcccc--ch-h-------------------hHHHHHHHHcCcCHHHHHHHHHHH
Confidence 9999999988877666655554433211100 00 0 011246788899888888888888
Q ss_pred HHHHHHHhhhhhHHHHHhhCCchhhhHHHHHHHHH-HHHHHHHhhhhchhHHHhc
Q 011781 349 SWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPL-ASVLVTSIAAQFADNLIAT 402 (477)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~-~~~~~~~~~g~l~dr~g~~ 402 (477)
.........+.+.|+.| .|+++.+.|.+....++ ..+++.++.|++.||+|++
T Consensus 221 ~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~ 274 (390)
T TIGR02718 221 AMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLW 274 (390)
T ss_pred HHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 88788888899999987 69999999998888765 5667789999999999987
No 87
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.90 E-value=3.3e-23 Score=188.40 Aligned_cols=238 Identities=16% Similarity=0.152 Sum_probs=209.1
Q ss_pred hhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhhccch
Q 011781 141 SHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVS 220 (477)
Q Consensus 141 ~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~ 220 (477)
..+.+-+.+++|++++...+...+.+++.|.+.||+|+|..+++|++++....++++ +.++++.+++.|.++|+|.+..
T Consensus 98 ~~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFa-fg~sy~~l~vAR~LQgvgsA~~ 176 (464)
T KOG3764|consen 98 AISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFA-FGNSYPMLFVARSLQGVGSAFA 176 (464)
T ss_pred ccCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHH-HcchhHHHHHHHHHhhhhHHHH
Confidence 344567889999999999999999999999999999999999999999999999885 7888899999999999999999
Q ss_pred hhhHHHHhhhhcCCcc-hhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHHHHHHHHHHHHHHHHHhccCCcCCCCC
Q 011781 221 PSAATDLIARSIPLEE-RSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGAT 299 (477)
Q Consensus 221 ~~~~~~~i~~~~~~~~-r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (477)
+.+..++++|.+|+++ |++++|+...+.++|.++||++||++.+..|.+.+|++.++++++-..+.+++.++.+.++..
T Consensus 177 ~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~~~ 256 (464)
T KOG3764|consen 177 DTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDPDS 256 (464)
T ss_pred HhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCccc
Confidence 9999999999998665 799999999999999999999999999999999999999999999887777776654433311
Q ss_pred CCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHhhCCchhhhHHHHH
Q 011781 300 LAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSI 379 (477)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~ 379 (477)
. .+..++++++++|.++.........+.........++.+..|.+..+..+.|+.+.
T Consensus 257 ~-----------------------~~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fL 313 (464)
T KOG3764|consen 257 T-----------------------EQGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFL 313 (464)
T ss_pred c-----------------------ccCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcceeeeec
Confidence 1 11335689999999999888887778888888888999998888866668999999
Q ss_pred HHHHHHHHHHHhhhhchhHHHhc
Q 011781 380 LPPLASVLVTSIAAQFADNLIAT 402 (477)
Q Consensus 380 ~~~~~~~~~~~~~g~l~dr~g~~ 402 (477)
...+...++..+.|.+.||+++.
T Consensus 314 p~~~~y~ig~~lfg~la~k~~~~ 336 (464)
T KOG3764|consen 314 PASLSYAIGTNLFGKLADKYPHL 336 (464)
T ss_pred ccccchhccCchHHHHHHhcCch
Confidence 99999999999999999999855
No 88
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.90 E-value=1.7e-21 Score=191.19 Aligned_cols=322 Identities=12% Similarity=0.015 Sum_probs=207.0
Q ss_pred HHHHHHHHHhhhhHHHHhHH-hhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcC-hhHHHHHHHHHHHHHHHH
Q 011781 119 TSLAFVICNMDKVNLSVAII-PMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGG-RKVLQTGVLIWSLATALL 196 (477)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~-~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~-r~~~~~~~~~~~~~~~~~ 196 (477)
++...++.+....++.+.++ .+.+++|++..++|++.+++.++..++++++|+++||+|+ |+++.++.++.++...+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~ 86 (418)
T TIGR00889 7 LKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFA 86 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 44555666666677755544 4667799999999999999999999999999999999965 777777777776666665
Q ss_pred HHhhchHHHHHHHHHHHHhhccchhhhHHHHhhhh--------cCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccCh
Q 011781 197 PLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARS--------IPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGW 268 (477)
Q Consensus 197 ~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~--------~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~ 268 (477)
. ..++++.+++.+++.|++.+...+...++.... .....|.+..| .+|.++||.+++.+....+|
T Consensus 87 ~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~~~ 159 (418)
T TIGR00889 87 A-QVTTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIELSN 159 (418)
T ss_pred H-HhcCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcccchh
Confidence 4 556678888899999998877777666654322 22223444444 47889999999877433335
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHHHHHHh
Q 011781 269 ESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCG 348 (477)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 348 (477)
. +|++.+++.++..+..+.++|+++.++++ +.+ . .+ . .....+.++|+|.++.+.+..++.
T Consensus 160 ~-~f~~~~~~~~~~~~~~~~~~e~~~~~~~~---~~~-~--~~-----------~-~~~~~~~~~k~~~~~~~~~~~~~~ 220 (418)
T TIGR00889 160 I-QLYITAGSSALLGVFALTLPDIPVAKSTA---KMS-I--KV-----------M-LGLDAFILFKNKRMAIFFFFSMLL 220 (418)
T ss_pred H-HHHHHHHHHHHHHHHHhcCCCCCCCcccc---ccC-H--HH-----------H-hhhhHHHHhcCCCeeeHHHHHHHH
Confidence 4 45566665555555555555542211110 000 0 00 0 011235678889888887777777
Q ss_pred HHHHHHHhhhhhHHHHHhhCCch--------hhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhh
Q 011781 349 SWGHYTCLSWLPTYFSEELSLNL--------TEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLS 420 (477)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~g~~~--------~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~ 420 (477)
.........+++.|+.+ .|.++ ...+...+...+..+++.++.|++.||+|+| +.+... .+.
T Consensus 221 ~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r--------~~l~~~-~~~ 290 (418)
T TIGR00889 221 GAPLQITNIFGNGFLHE-FGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIK--------KVMLLS-LVA 290 (418)
T ss_pred HhHHHHHHHhHHHHHHH-hcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcH--------HHHHHH-HHH
Confidence 66666667788888865 56543 5668888999999999999999999999876 343333 333
Q ss_pred hHHHHhhhcccCCCc--hH-HHHHHHHHHHHhhhhhhhhhhHhhhccCccchhhhhhhc
Q 011781 421 PAVCMTLSSIDLGLP--HW-EIVGILTAGLALSSFALSGLYCTHQDISPEYASILLYLE 476 (477)
Q Consensus 421 ~~~~~~l~~~~~~~~--~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~g~~~gl~ 476 (477)
.++...+........ .+ .++..++.|.+.+.........+.+..+++++|+++|+.
T Consensus 291 ~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~ 349 (418)
T TIGR00889 291 WALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLF 349 (418)
T ss_pred HHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
Confidence 333322222211111 22 233445555554444433344445556677799998864
No 89
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.89 E-value=3.3e-21 Score=191.32 Aligned_cols=317 Identities=12% Similarity=0.102 Sum_probs=208.5
Q ss_pred hhhhHHHHh-HHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhh----hcChh-HHHHHHHHHHHHHHHHHHhhc
Q 011781 128 MDKVNLSVA-IIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKI----FGGRK-VLQTGVLIWSLATALLPLLAG 201 (477)
Q Consensus 128 ~~~~~~~~~-~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr----~g~r~-~~~~~~~~~~~~~~~~~~~~~ 201 (477)
.....+..+ .+.+.+++|+++.++|++.++..+..++..++.|+++|| +|||| .++.+....+++.+++. ..+
T Consensus 13 ~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~-~~~ 91 (437)
T TIGR00792 13 FIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLF-TTP 91 (437)
T ss_pred HHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHH-hCC
Confidence 334444444 555778899999999999999999999999999999998 67755 56667677666666553 332
Q ss_pred h------HHHHHHHHHHHHhhccchhhhHHHHhhhhc-CCcchhhHHHHHHhhhhhHHHHHHhhhHHhhc-------ccC
Q 011781 202 F------MPGLVLSRVLVGIGEGVSPSAATDLIARSI-PLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE-------NLG 267 (477)
Q Consensus 202 ~------~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~-------~~g 267 (477)
+ ...+++.+++.+++.+...+...++..+.. ++++|++..++.+.+..+|..+++.+.+.+.. ..+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g 171 (437)
T TIGR00792 92 DFSATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFG 171 (437)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccc
Confidence 2 345667778888888887788888888887 56889999999999888988887776665542 458
Q ss_pred hhHHHHHHHHHHHHHHHHHHH-hccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHHHHH
Q 011781 268 WESVFYIFGLLGIAWFSGFKI-LQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHF 346 (477)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 346 (477)
|++.+++.+++.++..+..++ .+|++++.+.+ +++... ....++.++++|.++..++..+
T Consensus 172 ~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~---~~~~~~----------------~~~~~~~l~~~~~~~~~~~~~~ 232 (437)
T TIGR00792 172 WFMFALVLALIGVVSLIICFFGTKERYSEIPKN---IEKKLS----------------LKQIFKALFKNDQLLILCLAYL 232 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCEecCCCCCcc---cccCCC----------------HHHHHHHHhCCHHHHHHHHHHH
Confidence 999999988887776555433 34332110000 000000 0112467888999998888887
Q ss_pred HhHHHHHHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhhhHHHHh
Q 011781 347 CGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMT 426 (477)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~~~~ 426 (477)
+..........+.+.|.+..++ +....+.+.....++.+++.+++++++||+|+| +..... .+..++...
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~--------~~~~~~-~~~~~~~~~ 302 (437)
T TIGR00792 233 FYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRK--------ILFAGG-ILLMVLGYL 302 (437)
T ss_pred HHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH--------HHHHHH-HHHHHHHHH
Confidence 7777777666666666655555 455667777788899999999999999999876 333332 222222222
Q ss_pred hhcccCCCchHHHHHHHHHHHHhhhhhhhhhhHhhhccC--------ccchhhhhhh
Q 011781 427 LSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDIS--------PEYASILLYL 475 (477)
Q Consensus 427 l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--------p~~~g~~~gl 475 (477)
+......+.....+..++.+++.+... +..+.+..+.. ++++|+++|+
T Consensus 303 ~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 358 (437)
T TIGR00792 303 IFFFAGSNLPLILVLIILAGFGQNFVT-GLVWALVADTVDYGEWKTGVRAEGLVYSV 358 (437)
T ss_pred HHHHcchhHHHHHHHHHHHHHHHHHHH-HHHHHHHhhhhhhhhhhcCccchHHHHHH
Confidence 222222222233334444455544443 44555544442 3457887775
No 90
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.89 E-value=3.6e-21 Score=174.13 Aligned_cols=321 Identities=15% Similarity=0.049 Sum_probs=199.9
Q ss_pred hhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhhccc
Q 011781 140 MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGV 219 (477)
Q Consensus 140 ~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~ 219 (477)
..+..+.+....|++.+.+.+...+.++.+|.++||+|||.++.++....++..++. ..+.++..+++.|++.|+.-+-
T Consensus 59 ~~~~~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~-~~S~~F~afv~aR~l~Gi~kgn 137 (451)
T KOG2615|consen 59 IGEPDGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLW-ALSRNFAAFVLARFLGGIFKGN 137 (451)
T ss_pred hCCcccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhhccCc
Confidence 344445566778999999999999999999999999999999999999988877776 4788876677779999999765
Q ss_pred hhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhc---ccChhHHHH---HHHHHHHH-HHHHHHHhccC
Q 011781 220 SPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE---NLGWESVFY---IFGLLGIA-WFSGFKILQEG 292 (477)
Q Consensus 220 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~---~~g~~~~~~---~~~~~~~~-~~~~~~~~~~~ 292 (477)
. ....++++|.+++++|+++++......++|.++||.+||++.+ ..|-.+.++ +..+++.. .....++++|+
T Consensus 138 l-~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpET 216 (451)
T KOG2615|consen 138 L-SVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPET 216 (451)
T ss_pred h-HHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 4 6788999999999999999999999999999999999999987 233222222 11122222 33445566666
Q ss_pred CcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHH-------HHHHHHHHHhHHHHHHHhhhhhHHHHH
Q 011781 293 ETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAV-------WAMIYAHFCGSWGHYTCLSWLPTYFSE 365 (477)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~~~~~~~~~~~~~~~~~~~~ 365 (477)
-+.+++. ++... . .+...+. ++..+ .....-..+++|+.. ..+.+-.+.+...+..+..+.+.+..+
T Consensus 217 L~~rk~~-~~~~~-~--~~~~~~~-~~~~~-~~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~ 290 (451)
T KOG2615|consen 217 LPLRKRN-DEHST-L--QEAADDR-LALLK-FARIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTHG 290 (451)
T ss_pred ccchhhc-ccccc-h--hhhhhhh-hhhcc-hhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHhhcC
Confidence 4443333 11000 0 0000001 00000 001011123333322 122333344444444455555555456
Q ss_pred hhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhhhHHHHhhhcccCCCchHHHHHHHHH
Q 011781 366 ELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTA 445 (477)
Q Consensus 366 ~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 445 (477)
.+|+++.+.|.+++..++.+.+......+..+|.... .+......+....-.+++... ...+..+..+..+.
T Consensus 291 rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~-------~~a~l~~~l~~~vP~~llls~-~~~~~~l~~~s~l~ 362 (451)
T KOG2615|consen 291 RFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGN-------IKAVLLFSLLLIVPAFLLLSL-ARTPVVLYLGSTLK 362 (451)
T ss_pred ccCCChhhheeeeehhhHHHHHHHHhccccccccccc-------hhhHHHHHHHHHHHHHHHHhc-cccchhhhHHHHHH
Confidence 7899999999999999999999988888888886421 112222222222212222222 23444555555555
Q ss_pred HHHhhhhhhhhhhHhhhccCccchhhhhhhc
Q 011781 446 GLALSSFALSGLYCTHQDISPEYASILLYLE 476 (477)
Q Consensus 446 g~~~~~~~~~~~~~~~~~~~p~~~g~~~gl~ 476 (477)
.+..+...+..........++++||+++|+.
T Consensus 363 sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~ 393 (451)
T KOG2615|consen 363 SFSTASVVTCLTSLVHKYGPQSQRGTLNGIF 393 (451)
T ss_pred HHHHHHhhHHHHHHHHhcCCcccchHHHHHH
Confidence 5554444433444444445667799999974
No 91
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.88 E-value=6.6e-20 Score=183.49 Aligned_cols=168 Identities=15% Similarity=0.204 Sum_probs=134.5
Q ss_pred HHHHHHHHHHHHhhhhHHHHhHHh-hhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhh-hcChhHHHHHHHHHHHHH
Q 011781 116 IGTTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKI-FGGRKVLQTGVLIWSLAT 193 (477)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~ 193 (477)
+..++...+...+........++. +.+++|++..+.+++.+.+........+++|+++|| +|||+.+..+.++.+++.
T Consensus 23 ~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~ 102 (500)
T PRK09584 23 FYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGY 102 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHH
Confidence 344555555565665556555555 568899999999888888776666667899999999 599999999999998888
Q ss_pred HHHHHhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcc--hhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHH
Q 011781 194 ALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEE--RSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESV 271 (477)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~--r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~ 271 (477)
.++....+..+.+++.+++.|++.+...+...+++.+++|+++ |+.++++++.+.++|.++||.++|++.+++|||+.
T Consensus 103 ~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~ 182 (500)
T PRK09584 103 ALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVA 182 (500)
T ss_pred HHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHH
Confidence 7775433445667788999999999999999999999997543 45678899999999999999999999999999999
Q ss_pred HHHHHHHHHHHH
Q 011781 272 FYIFGLLGIAWF 283 (477)
Q Consensus 272 ~~~~~~~~~~~~ 283 (477)
|++.++..++..
T Consensus 183 F~i~~i~~~i~~ 194 (500)
T PRK09584 183 FALSVVGMLITV 194 (500)
T ss_pred HHHHHHHHHHHH
Confidence 999876554443
No 92
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.88 E-value=3.8e-20 Score=178.40 Aligned_cols=317 Identities=15% Similarity=0.141 Sum_probs=217.0
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHH--HhhchHHHHHHHHHHHHhhccchhhhHHHHh
Q 011781 151 AGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLP--LLAGFMPGLVLSRVLVGIGEGVSPSAATDLI 228 (477)
Q Consensus 151 ~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i 228 (477)
.+.+.+++.+|.++|++..++++||+|||..+.++.++..++.++.. ...+.+..++++|++.|+..+........++
T Consensus 62 wS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl 141 (485)
T KOG0569|consen 62 WSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYL 141 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 46677899999999999999999999999999888776666554442 3457788999999999999999999999999
Q ss_pred hhhcCCcchhhHHHHHHhhhhhHHHHHHhhhH-Hhh-cccChhHHHHHHHHHHHHHHHHHHHhccCCcCCCCCCCCcc--
Q 011781 229 ARSIPLEERSRAVSFVFGGLSFGSVAGLLLAP-PII-ENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRS-- 304 (477)
Q Consensus 229 ~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~-~l~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 304 (477)
.|..|++.||....+...+..+|..++..++. .+. +.-.|++.+.+..+.+++..+...++||+++.--.++.+++
T Consensus 142 ~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~~~~~A 221 (485)
T KOG0569|consen 142 TEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFLPESPKYLLIKKGDEEEA 221 (485)
T ss_pred hhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHcCCHHHH
Confidence 99999999999999999999999999966654 333 34569999999999999999999999998875433111111
Q ss_pred -hhhhhhhhhh-------h---h-HHhhccCCCCCCHHHHhhcHHHHHHHHH-----HHHhHHHHHHHhhhhhHHHHHhh
Q 011781 305 -NYINMKKSLS-------A---S-LEEMGESLKDVPWKAIFRSKAVWAMIYA-----HFCGSWGHYTCLSWLPTYFSEEL 367 (477)
Q Consensus 305 -~~~~~~~~~~-------~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~~~~~~~~~ 367 (477)
+..+.-++.. . . .++..++.+..+++++++++....-... ..-...+......|...++.+ .
T Consensus 222 ~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~-a 300 (485)
T KOG0569|consen 222 RKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKT-A 300 (485)
T ss_pred HHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHH-c
Confidence 1111111111 0 1 1111222255678899988665443222 222233344555666666654 7
Q ss_pred CCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhhhHHHHhhhcc--cCCCc-h----HHHH
Q 011781 368 SLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSI--DLGLP-H----WEIV 440 (477)
Q Consensus 368 g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~~~~l~~~--~~~~~-~----~~~~ 440 (477)
|++...+.+.....++..++..+++.++.||+||| ..++..........+++... ..... . ..+.
T Consensus 301 G~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRR--------pLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~ 372 (485)
T KOG0569|consen 301 GFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRR--------PLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIA 372 (485)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc--------HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 99999999999999999999999999999999987 33333222222222221111 01111 1 1234
Q ss_pred HHHHHHHHhhhhhhhhhhHhhhccC-ccchhhhhhhc
Q 011781 441 GILTAGLALSSFALSGLYCTHQDIS-PEYASILLYLE 476 (477)
Q Consensus 441 ~~~~~g~~~~~~~~~~~~~~~~~~~-p~~~g~~~gl~ 476 (477)
+.++...+++....|..+.+..++. ++.|..++++.
T Consensus 373 ~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~ 409 (485)
T KOG0569|consen 373 AIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVA 409 (485)
T ss_pred HHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHH
Confidence 4455555555555667777777755 55588887653
No 93
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.88 E-value=4.1e-20 Score=186.32 Aligned_cols=316 Identities=18% Similarity=0.161 Sum_probs=208.5
Q ss_pred hhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhhccchhhhHHHHhh
Q 011781 150 VAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIA 229 (477)
Q Consensus 150 ~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~ 229 (477)
+.+++.+...++..+++++.|+++|++|||+.++++.+++.++.++.+ .+++++.++++|++.|+|.|........+++
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~-~a~~~~~l~~GR~l~G~g~G~~~~~~piy~s 168 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIA-LAPSWYQLIVGRILTGLGVGGASVLAPVYIS 168 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHhccchhhhhhcchhhHh
Confidence 458999999999999999999999999999999999999999999885 7778899999999999999999999999999
Q ss_pred hhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcc-cChhHHHHHHHHHHHHHHHHHHHhccCCcCCCCCCCCcc--hh
Q 011781 230 RSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN-LGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRS--NY 306 (477)
Q Consensus 230 ~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 306 (477)
|..|++.||...+..+....+|..++..++....+. .+||..+.+..+.+++..+..+++||.++.-.+.....+ +.
T Consensus 169 Eiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g~~~~a~~~ 248 (513)
T KOG0254|consen 169 EIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALGMLFLPESPRWLIEKGRLEEAKRS 248 (513)
T ss_pred hcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcCChHHHHHH
Confidence 999999999999999999999999985544444322 489999999888888887777777766543322111111 10
Q ss_pred hhhhhh-----hhhhH--------HhhccCCCCCCHHHHhh----cHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHhhCC
Q 011781 307 INMKKS-----LSASL--------EEMGESLKDVPWKAIFR----SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSL 369 (477)
Q Consensus 307 ~~~~~~-----~~~~~--------~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~ 369 (477)
...... ..... .+......+..+..+++ ++.++...+..+....+......|.+.+++. .|.
T Consensus 249 l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~-~g~ 327 (513)
T KOG0254|consen 249 LKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKS-AGL 327 (513)
T ss_pred HHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHh-cCC
Confidence 000000 00000 00001111112333332 3344455566666666677788888888865 576
Q ss_pred chhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhhhHHHHhhhcc--c--------CCCchHHH
Q 011781 370 NLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSI--D--------LGLPHWEI 439 (477)
Q Consensus 370 ~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~~~~l~~~--~--------~~~~~~~~ 439 (477)
+... .......++..+++..++..+.||+||| +.++..........+++... . .....+.+
T Consensus 328 ~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr--------~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (513)
T KOG0254|consen 328 KSDT-FLASIILGVVNFLGTLVATYLVDRFGRR--------KLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAI 398 (513)
T ss_pred CCch-HHHHHHHHHHHHHHHHHHHHHHHHhccH--------HHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHH
Confidence 6443 4556667777888888889999999877 33332222222222211111 0 01122333
Q ss_pred HHHHHHHHHhhhhhhhhhhHhhhccCccc-hhhhhhhc
Q 011781 440 VGILTAGLALSSFALSGLYCTHQDISPEY-ASILLYLE 476 (477)
Q Consensus 440 ~~~~~~g~~~~~~~~~~~~~~~~~~~p~~-~g~~~gl~ 476 (477)
+...+.-..+.....+..+.+..+..|.+ |+++.++.
T Consensus 399 ~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~ 436 (513)
T KOG0254|consen 399 VFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLA 436 (513)
T ss_pred HHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHH
Confidence 33444444445555566666666665544 77776653
No 94
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.86 E-value=1.9e-18 Score=169.49 Aligned_cols=356 Identities=14% Similarity=0.113 Sum_probs=209.5
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHhHHh-hhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhh-cChhHHHHHHHHHHH
Q 011781 114 KLIGTTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIF-GGRKVLQTGVLIWSL 191 (477)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~ 191 (477)
+-+..++...+...+.......++|. +.+++|+++.+.+.+.+.+.....++++++|+++||+ |||+.+.++.++.++
T Consensus 9 ~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~l 88 (493)
T PRK15462 9 RAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAI 88 (493)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHH
Confidence 44444455555555566666666665 4667899999999999999999999999999999999 999999999999888
Q ss_pred HHHHHHHhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCc--chhhHHHHHHhhhhhHHHHHHhhhHHhhcccChh
Q 011781 192 ATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLE--ERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWE 269 (477)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~ 269 (477)
+.+++.....+...+++...+.+++.+...+...++++|.+|++ +|..++++.+.+.++|+.++|.+.+++.+..||+
T Consensus 89 g~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~ 168 (493)
T PRK15462 89 GHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWA 168 (493)
T ss_pred HHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChH
Confidence 87665422222233444444555666777788889999999875 6999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCcCC---CCCCCCcchhhhh---------------hhh-hhhhH-H-----------
Q 011781 270 SVFYIFGLLGIAWFSGFKILQEGETSN---GATLAPRSNYINM---------------KKS-LSASL-E----------- 318 (477)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~---------------~~~-~~~~~-~----------- 318 (477)
+.|.+.++..++.++.+....+...+. ++++.++++.... ... ..+.. .
T Consensus 169 ~~F~iaaigm~l~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (493)
T PRK15462 169 MGFGLAAVGMIAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLVLLVATPALITVLFWKEWSVYALIVATIIGL 248 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999987765544444433322211111 0111100000000 000 00000 0
Q ss_pred ----hhccCCCCCCHHHHhhcH--HHHHHHHHHHHhHHHHHHHhhhhhHHHHHhh-----CCchhhhHHHHHHHHHHHHH
Q 011781 319 ----EMGESLKDVPWKAIFRSK--AVWAMIYAHFCGSWGHYTCLSWLPTYFSEEL-----SLNLTEAAWVSILPPLASVL 387 (477)
Q Consensus 319 ----~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----g~~~~~~g~~~~~~~~~~~~ 387 (477)
..... +.+ +.=|+| .+..+++...++...+....+-+..|..+.. |++ ...++..+...+..++
T Consensus 249 ~~~~~~~~~--~~~--~~er~r~~~~~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~-ip~~~~qslNp~~ii~ 323 (493)
T PRK15462 249 GVLAKIYRK--AEN--QKQRKELGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVNRDMFGYT-VPTAMFQSINAFAVML 323 (493)
T ss_pred HHHHHHHHh--cCC--HHHHhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccchhccee-eCHHHHHhHhHHHHHH
Confidence 00000 000 000111 1223334444444555555566666665532 222 2255677888888787
Q ss_pred HHHhhhhchhHHHhcCcccceehhhhhHHhhhhhHHHHhhh-c--ccC---CCchHHHHHHHHHHHHhhhhhhhhhhHhh
Q 011781 388 VTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLS-S--IDL---GLPHWEIVGILTAGLALSSFALSGLYCTH 461 (477)
Q Consensus 388 ~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~~~~l~-~--~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 461 (477)
..++.+++=.|..+|++....+.|......+...+...+.. . ... .+..|+++..++...+ ..+..|...+..
T Consensus 324 l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~g-El~~sPvgls~~ 402 (493)
T PRK15462 324 CGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFA-ELFIDPVAMSQI 402 (493)
T ss_pred HHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHH-HHHHChHHHHHH
Confidence 77777777666654433333334443333222222212211 1 111 2345555555556555 445556666666
Q ss_pred hccCccc-hhhhhhh
Q 011781 462 QDISPEY-ASILLYL 475 (477)
Q Consensus 462 ~~~~p~~-~g~~~gl 475 (477)
.++.|++ +|+.+|+
T Consensus 403 ~~laP~~~~g~~mg~ 417 (493)
T PRK15462 403 TRIEIPGVTGVLTGI 417 (493)
T ss_pred HHhChHHHHHHHHHH
Confidence 6666655 9999986
No 95
>PTZ00207 hypothetical protein; Provisional
Probab=99.85 E-value=1.6e-18 Score=172.72 Aligned_cols=338 Identities=12% Similarity=0.098 Sum_probs=227.0
Q ss_pred hhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhh-----ch
Q 011781 128 MDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLA-----GF 202 (477)
Q Consensus 128 ~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~-----~~ 202 (477)
.....++.+.+.+.+++|++..+++++.++. ....+++++.|++.||+|+|+++.++.++++++.+++++.. .+
T Consensus 41 g~~y~fsv~s~~L~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s 119 (591)
T PTZ00207 41 SFMYAFNLISGAMQARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGS 119 (591)
T ss_pred HHHHHHHHHHHHHHHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCc
Confidence 3345666778889999999999999998874 44556788899999999999999999999999998886431 46
Q ss_pred HHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHH-HHhhhHHhhcccChhHHHHHHHHHHHH
Q 011781 203 MPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVA-GLLLAPPIIENLGWESVFYIFGLLGIA 281 (477)
Q Consensus 203 ~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~i-g~~~~~~l~~~~g~~~~~~~~~~~~~~ 281 (477)
++.+++.|++.|+|.+...+.....+.+++| ++||++.|+...+.++|.++ +++..+++. .+|++.|++.+++.++
T Consensus 120 ~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~--~~~~~~fl~l~vl~~v 196 (591)
T PTZ00207 120 VVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS--DNTSAYFFFLMSFALV 196 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhHHHHHHHHHHHHHH
Confidence 7899999999999999999999999999997 78999999999999999976 454454443 3688889988888877
Q ss_pred HHHHHHHhccCCcCCCC---C--CCCcchh------------------h------------------------hhhh---
Q 011781 282 WFSGFKILQEGETSNGA---T--LAPRSNY------------------I------------------------NMKK--- 311 (477)
Q Consensus 282 ~~~~~~~~~~~~~~~~~---~--~~~~~~~------------------~------------------------~~~~--- 311 (477)
..++...+.++++.... + .+++++. . ...+
T Consensus 197 v~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~~~~~~~~~~~~~~~~~ 276 (591)
T PTZ00207 197 VGILAIVFMRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLPLQGALVAYLKLGSNFK 276 (591)
T ss_pred HHHHHHhheeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHHHHHHHHHHhcccHHHH
Confidence 66655554443332111 0 0111110 0 0000
Q ss_pred ------hh---------------------h-h-h--H------------Hh-------hc-c-CCCCCCHHHHhhcHHHH
Q 011781 312 ------SL---------------------S-A-S--L------------EE-------MG-E-SLKDVPWKAIFRSKAVW 339 (477)
Q Consensus 312 ------~~---------------------~-~-~--~------------~~-------~~-~-~~~~~~~~~~~~~~~~~ 339 (477)
.. + + + . ++ .+ . .....++.+.+++..+|
T Consensus 277 ~~~~~v~~~lll~~p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~t~~q~l~~~d~W 356 (591)
T PTZ00207 277 VGFAVTVIVLTVIFPFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDVDYIAPQFQETFIEGLKTARLW 356 (591)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHhccCCcCCCccccccccccccccccccccccccccccCCCCCCcchHHHHHhchhHH
Confidence 00 0 0 0 0 00 00 0 00112677888899999
Q ss_pred HHHHHHHHhHHHHHHHhhhhhHHHHHhh-CCchhh--hHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHH
Q 011781 340 AMIYAHFCGSWGHYTCLSWLPTYFSEEL-SLNLTE--AAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTI 416 (477)
Q Consensus 340 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~--~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~ 416 (477)
.+++..++...........+....+. + |.+... ...+.++.++.+.+|++..|.+.....+|+...+.+|...+.+
T Consensus 357 ll~~~~~cg~g~gl~~~~N~~qI~~s-l~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~ 435 (591)
T PTZ00207 357 CLLWSIFCCVGAHFVIIFNARFIYTA-LAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFI 435 (591)
T ss_pred HHHHHHHHhhCchheeeecHHHHHHH-hcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHH
Confidence 99999999988888888888888865 5 663322 2227789999999999999999844444432223345555555
Q ss_pred hhhhhHHHHhhhcccCCCchHHHHHHHHHHHHhhhhhhhhhhHhhhccCccchhhhh
Q 011781 417 AFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILL 473 (477)
Q Consensus 417 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~g~~~ 473 (477)
..+ ..+..+++....+. ..+.+..+++|++.+... +....+..++..++-|+..
T Consensus 436 ~~~-~~~~~lll~~~~p~-~~L~~~~~lvg~~~G~~~-~~~~~i~selFgk~~g~~y 489 (591)
T PTZ00207 436 PSV-CIITMLTLFLTLPK-AALPLPYFIAAFANGFMA-ATIALVTRTIFAKDPAKHY 489 (591)
T ss_pred HHH-HHHHHHHHHHHCCc-cHhHHHHHHHHHHhhHhH-HHHHHHHHHHhccchHHHh
Confidence 555 33333333332221 355667777777766555 4444444554437766643
No 96
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.84 E-value=2.6e-19 Score=181.40 Aligned_cols=318 Identities=15% Similarity=0.065 Sum_probs=205.4
Q ss_pred hhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhhccch
Q 011781 141 SHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVS 220 (477)
Q Consensus 141 ~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~ 220 (477)
.+.++.+.....+..+++.+|..+|++++|.++||+|||++++++.++..++.+.. .++++++.+++.|++.|++.++.
T Consensus 110 ~~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~-a~a~~~~~~~~~Rfl~G~~~~~~ 188 (521)
T KOG0255|consen 110 WNLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILT-AFAPNYWMFLIFRFLSGFFGSGP 188 (521)
T ss_pred hceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHH-HHhCcHHHHHHHHHHHHhhccch
Confidence 35567788889999999999999999999999999999999999999998888776 58899999999999999999999
Q ss_pred hhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHHHHHHHHHHHHHHHHHhccCCcCCCCCC
Q 011781 221 PSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATL 300 (477)
Q Consensus 221 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (477)
......++.|++++++|+.+..+ ......++.+++..++++.. +||+.+++..+..++.++..++.+|.++....+.
T Consensus 189 ~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~~~l~~Es~rwl~~~g 265 (521)
T KOG0255|consen 189 LTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLLWFLPPESPRWLLSKG 265 (521)
T ss_pred hHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHccCcChHHHHHcC
Confidence 99999999999999999999999 88888888999999998887 8999999999988887777555556654332222
Q ss_pred CCcchhhhhhh---------hh----hh--hHHh--hccCCCCCCHHHHhhcHHHHHHHHHHHHhHHHHHHHhhhhhHHH
Q 011781 301 APRSNYINMKK---------SL----SA--SLEE--MGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYF 363 (477)
Q Consensus 301 ~~~~~~~~~~~---------~~----~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 363 (477)
+.++.....++ .. .. ..+. .....+...+..+++.|.+....+...+..+.......-++...
T Consensus 266 ~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~y~gl~~~~ 345 (521)
T KOG0255|consen 266 RIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVFSLVYYGLSLNV 345 (521)
T ss_pred chHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHHHhHHHHhhhhhh
Confidence 11111110000 00 00 0000 11111224567888887655544444444433332222233333
Q ss_pred HHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhhhHHHHhhhcccCCCch-HHHHHH
Q 011781 364 SEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPH-WEIVGI 442 (477)
Q Consensus 364 ~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~ 442 (477)
..+|.+.. ......+.....+....+...|++||| .....+.....+++++......... ++...+
T Consensus 346 -~~lg~~~~---~~~~~~~~~~~p~~~~~~~~~~~~gR~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (521)
T KOG0255|consen 346 -SGLGGNIY---LNFTLSGLVELPAYFRNGLLLPEFGRR---------PPLFLSLFLAGIGLLLFGWLPDDLGGWLHWIL 412 (521)
T ss_pred -hhcCchHH---HHHHHHHHHHhhHHHHHHHHHHHhCcH---------HHHHHHHHHHHHHHHHHHHhhccchhHHHHHH
Confidence 23444433 333444447777777778899999765 3334444444444433333222222 233333
Q ss_pred HHHHHHhhhhhhhhhhHhhhcc-Cccchhhhhhh
Q 011781 443 LTAGLALSSFALSGLYCTHQDI-SPEYASILLYL 475 (477)
Q Consensus 443 ~~~g~~~~~~~~~~~~~~~~~~-~p~~~g~~~gl 475 (477)
.+++.+..............+. +...|+.+.|.
T Consensus 413 ~~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~~~ 446 (521)
T KOG0255|consen 413 PLLGKFFIGSAFNLIFLYSAELIPTVVRNTAVGA 446 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHH
Confidence 3334333333333334445554 44447766654
No 97
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.84 E-value=3.5e-18 Score=164.87 Aligned_cols=326 Identities=15% Similarity=0.094 Sum_probs=225.8
Q ss_pred HHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhc-ChhHHHHHHHHHHHHHHHHH
Q 011781 119 TSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFG-GRKVLQTGVLIWSLATALLP 197 (477)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g-~r~~~~~~~~~~~~~~~~~~ 197 (477)
+...+++.+.....+.++.+.+.++.|+|..|+|.+.++..+..+++++++|.++||.+ +|+.+.+..++.++.....
T Consensus 7 Ls~~~f~~f~~~G~~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~- 85 (400)
T PF03825_consen 7 LSLMYFLYFFAYGAFLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLL- 85 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHH-
Confidence 34455666677778888899999999999999999999999999999999999999986 4666666666655555444
Q ss_pred HhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhh-HHhhcccC---hhHHHH
Q 011781 198 LLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLA-PPIIENLG---WESVFY 273 (477)
Q Consensus 198 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~-~~l~~~~g---~~~~~~ 273 (477)
...++++.+++..++..+......|...++..+... +++.-.|-....+++|.+++.... +.+....+ ..+.++
T Consensus 86 ~~~~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (400)
T PF03825_consen 86 AFSSSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFY 163 (400)
T ss_pred HHhccHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHH
Confidence 355667778888888888888888999998888875 455667778888888888775542 33333322 334566
Q ss_pred HHHHHHHHHHHHHHHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHHHHHHhHHHHH
Q 011781 274 IFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHY 353 (477)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 353 (477)
+.+++.++.....+.+|+.++++..+...++. ...+..+++|+|+++.+.+..++......
T Consensus 164 i~~~~~~ll~~~~l~lp~~~~~~~~~~~~~~~-------------------~~~~~~~llk~~~~~~Fll~~~l~~~~~~ 224 (400)
T PF03825_consen 164 IAAILSLLLAGFALFLPKTPPKRSAKESVKKL-------------------LGLDALKLLKNPRFLVFLLAAFLIGISHA 224 (400)
T ss_pred HHHHHHHHHHHHHHhCCCCccccccCCCcccc-------------------cchHHHHHhcCccHHHHHHHHHHHHHHHH
Confidence 66655555555555566554222111111100 01122478999999999999999999999
Q ss_pred HHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhhhHHHHhhhcccCC
Q 011781 354 TCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLG 433 (477)
Q Consensus 354 ~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~~~~l~~~~~~ 433 (477)
....+.+.|+++.-|.+....+.+.++..++.++.....+++.+|+|.+ +.+. ++.+..++=..+.....+
T Consensus 225 ~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~--------~ll~-~a~~~~~vR~~l~a~~~~ 295 (400)
T PF03825_consen 225 AYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIK--------WLLL-LALVAYAVRWLLYAYFSD 295 (400)
T ss_pred HHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH--------HHHH-HHHHHHHHHHHHHHHhcC
Confidence 9999999999875337778888888888899999999999999999876 3433 333333333333322212
Q ss_pred CchHHHHHH----HHHHHHhhhhhhhhhhHhhhccCccchhhhhhh
Q 011781 434 LPHWEIVGI----LTAGLALSSFALSGLYCTHQDISPEYASILLYL 475 (477)
Q Consensus 434 ~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~p~~~g~~~gl 475 (477)
+.++..... .+-|..++.+.......+....|++.++++.|+
T Consensus 296 ~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l 341 (400)
T PF03825_consen 296 PWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGL 341 (400)
T ss_pred CcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHH
Confidence 222222222 346777777776666666666777778988876
No 98
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.83 E-value=5.6e-18 Score=165.47 Aligned_cols=337 Identities=11% Similarity=0.083 Sum_probs=215.1
Q ss_pred HHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhh----hhcChhHHHHH-HHHHHHH
Q 011781 118 TTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAK----IFGGRKVLQTG-VLIWSLA 192 (477)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d----r~g~r~~~~~~-~~~~~~~ 192 (477)
.++...+-..+.........+.+.+++|.+....+++..+..+...+.+++.|+++| |+|||+.++++ .....++
T Consensus 8 ~~~~~~~Giq~~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~ 87 (477)
T TIGR01301 8 RVASVAAGVQFGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFA 87 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHH
Confidence 334444455566777777788888999999999999999999999999999999999 59999998875 4444444
Q ss_pred HHHHHHhhchH-----------------HHHHHHHHHHHhhccchhhhHHHHhhhhcCCcch--hhHHHHHHhhhhhHHH
Q 011781 193 TALLPLLAGFM-----------------PGLVLSRVLVGIGEGVSPSAATDLIARSIPLEER--SRAVSFVFGGLSFGSV 253 (477)
Q Consensus 193 ~~~~~~~~~~~-----------------~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~g~~ 253 (477)
.++++ .+.+. +..++...+..++.....+...++++|..|+++| +.++++.+...++|.+
T Consensus 88 l~ll~-~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~i 166 (477)
T TIGR01301 88 VILIG-FAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNV 166 (477)
T ss_pred HHHHH-hCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHH
Confidence 44443 33322 2233334455567777888899999999998765 6799999999999999
Q ss_pred HHHhhhHHh--hccc-------------ChhHHHHHHHHHHHHHHHHHHH-hccCCcCCCCCCCCcchhhhhhhhhhhhH
Q 011781 254 AGLLLAPPI--IENL-------------GWESVFYIFGLLGIAWFSGFKI-LQEGETSNGATLAPRSNYINMKKSLSASL 317 (477)
Q Consensus 254 ig~~~~~~l--~~~~-------------g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (477)
+|+.++++. .+.+ +.++.|++.+++.++..++..+ .+|.+....++..++ +. +
T Consensus 167 lg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~-~~-~--------- 235 (477)
T TIGR01301 167 LGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFINS-EA-A--------- 235 (477)
T ss_pred HHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchhh-hc-c---------
Confidence 999999875 2211 5788999888777766555444 455433211110000 00 0
Q ss_pred HhhccCCCCCCHHHHhh-----cHHHHHHHHHHHHhHHHHHHHhhhhhHHHHH-hhCCchh------h----hHHHHHHH
Q 011781 318 EEMGESLKDVPWKAIFR-----SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSE-ELSLNLT------E----AAWVSILP 381 (477)
Q Consensus 318 ~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~------~----~g~~~~~~ 381 (477)
+.++......++++++ .|.++.+++..++..++++.+..|.+.|+.+ .++.++. + ..+.....
T Consensus 236 -~~~~~~~~~~~~~i~~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~ 314 (477)
T TIGR01301 236 -PPSKHGEEAFFGELFGAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLN 314 (477)
T ss_pred -cccccchhhhHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHH
Confidence 0000000112233333 3778999999999999999999999998864 4554321 1 12334445
Q ss_pred HHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhhhHHHHhhhcc-cC-----------------CC--chHHHHH
Q 011781 382 PLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSI-DL-----------------GL--PHWEIVG 441 (477)
Q Consensus 382 ~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~~~~l~~~-~~-----------------~~--~~~~~~~ 441 (477)
.+...+..++..++.+|+|+| +..-.++.++.++++....+ .. .. ....++.
T Consensus 315 s~~~~i~s~~l~~l~~~~g~~--------k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 386 (477)
T TIGR01301 315 SVVLGITSIGMEKLCRGWGAG--------KRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIV 386 (477)
T ss_pred HHHHHHHHHHHHHHHHHhccc--------hhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHH
Confidence 555567777778888888754 23323333333333332221 10 00 1445566
Q ss_pred HHHHHHHhhhhhhhhhhHhhhccCc--cchhhhhhh
Q 011781 442 ILTAGLALSSFALSGLYCTHQDISP--EYASILLYL 475 (477)
Q Consensus 442 ~~~~g~~~~~~~~~~~~~~~~~~~p--~~~g~~~gl 475 (477)
+.++|+..+......+..+.+..++ ++.|..+|+
T Consensus 387 ~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgi 422 (477)
T TIGR01301 387 FAILGIPLAITYSIPFALASIRSSNLGAGQGLSMGV 422 (477)
T ss_pred HHHhhHHHHHHHHHhHHHHHHHccccCCCCcchhhH
Confidence 6777888777776666666666663 345777775
No 99
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.82 E-value=1.7e-20 Score=162.69 Aligned_cols=336 Identities=13% Similarity=0.102 Sum_probs=224.2
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhh-hcChhHHHHHHHHHHHH
Q 011781 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKI-FGGRKVLQTGVLIWSLA 192 (477)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~ 192 (477)
..+..+|+..|-.+++...-+....++..+.+++.++..++.+++....++.++++|++.|| +|.|..-++-.....++
T Consensus 44 m~lv~mc~lgfgsyfcyd~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~G 123 (459)
T KOG4686|consen 44 MALVFMCLLGFGSYFCYDAPGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLG 123 (459)
T ss_pred HHHHHHHHhcccceeecCCchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHH
Confidence 34444555555555666666666777888889999999999999999999999999999997 68776655555555566
Q ss_pred HHHHH--HhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccCh--
Q 011781 193 TALLP--LLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGW-- 268 (477)
Q Consensus 193 ~~~~~--~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~-- 268 (477)
.++++ ...+.+|.+.+.||+.|+|.-....+.+.++..++..++.+.++|+..+...+|..+--.+.+++.+..+-
T Consensus 124 qliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~~~~ 203 (459)
T KOG4686|consen 124 QLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMGRMF 203 (459)
T ss_pred HHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHHHHhc
Confidence 65543 34677899999999999998888899999999999999999999999999999999888888888775431
Q ss_pred ----hHHH---HHHHHH-HHHHHHHHHHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHH
Q 011781 269 ----ESVF---YIFGLL-GIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWA 340 (477)
Q Consensus 269 ----~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (477)
+... ...+.. +...++....+--.+.+.+ +....+++... +..+..+. . --.|.+|.
T Consensus 204 ~~~ghT~LG~~l~~~~~tc~~slical~lg~~D~rAe-------rilh~e~g~~G------e~pkLtdv-~-~f~ppfw~ 268 (459)
T KOG4686|consen 204 PGVGHTLLGLWLCFEVKTCKQSLICALSLGLSDDRAE-------RILHLEEGFLG------EEPKLTDV-N-TFYPPFWV 268 (459)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHH-------HHHhhhcCccc------CCcccccc-c-ccCccHHH
Confidence 1111 111111 1111111111110000000 00000000000 00000000 0 11478999
Q ss_pred HHHHHHHhHHHHHHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhh
Q 011781 341 MIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLS 420 (477)
Q Consensus 341 ~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~ 420 (477)
+.+.+++++.+.+.+.+.-|.++++++|+++..++.+.+.....+.+...+.|.++||+|++ .+....+.+.
T Consensus 269 ~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n--------~~wv~~a~~~ 340 (459)
T KOG4686|consen 269 LVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFN--------LWWVASACIL 340 (459)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcce--------ehhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999987 3333444443
Q ss_pred hHHHHhhhcccCCCchHHHHHHHHHHHHhhhhhhhhhhHhhhccCc-cchhhhhhhc
Q 011781 421 PAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISP-EYASILLYLE 476 (477)
Q Consensus 421 ~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p-~~~g~~~gl~ 476 (477)
..+.-....+.. ..+| +.+.++|....... ...|.....+.| ++.|+++|.+
T Consensus 341 tl~~H~~l~Ft~-lsPy--~~m~~lGLsysllA-cslWP~va~~vpE~qLGTaygf~ 393 (459)
T KOG4686|consen 341 TLLGHSGLFFTF-LSPY--TSMTFLGLSYSLLA-CSLWPCVASLVPEEQLGTAYGFI 393 (459)
T ss_pred HHHHhhhHHhhh-ccHH--HHHHHHhhhHHHHH-HHHhhhhhhhCCHHHhcchHHHH
Confidence 333333333322 2233 34555566544443 334444555444 4599998863
No 100
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.82 E-value=1.5e-17 Score=149.90 Aligned_cols=182 Identities=18% Similarity=0.192 Sum_probs=154.3
Q ss_pred hHHHHHHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHH
Q 011781 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (477)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 191 (477)
++..............+-........|.+....|.+..+..++......+..+++..+|.++|++|||+.+.+..+..++
T Consensus 76 q~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v 155 (528)
T KOG0253|consen 76 QWYLFFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGV 155 (528)
T ss_pred hhhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHH
Confidence 45666666666655555556666667778888899999999999999999999999999999999999999998887777
Q ss_pred HHHHHHHhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHH
Q 011781 192 ATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESV 271 (477)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~ 271 (477)
...+- ..++++..+++.|.+.|+|.|+ .|...++-.+..|..+|..-+-+. ..+.+|.++...++-....++||||.
T Consensus 156 ~~~is-~~spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~gwr~~ 232 (528)
T KOG0253|consen 156 FGVIS-GASPNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWRYL 232 (528)
T ss_pred HHHhh-cCCCCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 66665 4678889999999999999999 899999999999988888877666 88999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhccCCcCC
Q 011781 272 FYIFGLLGIAWFSGFKILQEGETSN 296 (477)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (477)
+...+....+.+...++++|.++..
T Consensus 233 l~~~~~pl~~~a~f~~w~~ESpRf~ 257 (528)
T KOG0253|consen 233 LFTSSTPLMFAARFLVWVYESPRFY 257 (528)
T ss_pred HHHHHhHHHHHHHHHhhcccCcchh
Confidence 9998877777788888888877654
No 101
>PRK09669 putative symporter YagG; Provisional
Probab=99.82 E-value=7.9e-18 Score=167.07 Aligned_cols=305 Identities=11% Similarity=0.015 Sum_probs=188.2
Q ss_pred hhHHHHh-HHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhh----hcChhH-HHHHHHHHHHHHHHHHHhh---
Q 011781 130 KVNLSVA-IIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKI----FGGRKV-LQTGVLIWSLATALLPLLA--- 200 (477)
Q Consensus 130 ~~~~~~~-~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr----~g~r~~-~~~~~~~~~~~~~~~~~~~--- 200 (477)
......+ ...+.+++|+++.++|.+.++..+...+..|+.|.++|| +||||. ++.+.+..+++..++...+
T Consensus 25 ~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~ 104 (444)
T PRK09669 25 WQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFG 104 (444)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCC
Confidence 3344444 555788899999999999999999999999999999998 677554 5456566666654442221
Q ss_pred --chHHHHHHHHHHHHhhccchhhhHHHHhhhhc-CCcchhhHHHHHHhhhhhHHHHHHhhhHHhhc-------ccChhH
Q 011781 201 --GFMPGLVLSRVLVGIGEGVSPSAATDLIARSI-PLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE-------NLGWES 270 (477)
Q Consensus 201 --~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~-------~~g~~~ 270 (477)
.....+++..++.+.+......+..++.+++. ++++|.+..++...+..+|..+++.+...+.. ..+|+.
T Consensus 105 ~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~ 184 (444)
T PRK09669 105 ATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFY 184 (444)
T ss_pred cchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHH
Confidence 11344555666667777777777888999988 56889999898888888888887765544432 246888
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHHHHHHhHH
Q 011781 271 VFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSW 350 (477)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 350 (477)
.+.+.+++.++..+..++..+++..++++ ++ . . ....++.+++||.++.+++..++...
T Consensus 185 ~~~i~~ii~~v~~~~~~~~~~e~~~~~~~--~~-~--~----------------~~~~~~~~~~n~~~~~l~~~~~~~~~ 243 (444)
T PRK09669 185 AMMVMGLLGVVLFFCCFFMTKERYTPEVD--NS-S--S----------------VWKDLKLLLGNSQWRIMFIFNVVLLT 243 (444)
T ss_pred HHHHHHHHHHHHHHHHhCCeEEecCCCCc--CC-C--C----------------HHHHHHHHhCCchHHHHHHHHHHHHH
Confidence 88887777766554444332221111100 00 0 0 01124678899998888777766655
Q ss_pred HHHHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhhhHHHHhhhcc
Q 011781 351 GHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSI 430 (477)
Q Consensus 351 ~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~~~~l~~~ 430 (477)
.........+.|.+..++ +....+.+.....+..+++.++++++.||+|+| +.............+.+...
T Consensus 244 ~~~~~~~~~~y~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~--------~~~~~~~~~~~~~~~~~~~~ 314 (444)
T PRK09669 244 AVVTRGGATLYYVNYVLL-RPDLATLFLVTGMIAGLFGALLSERLLGKFDRV--------RAFKWTIVAFVILSALIFFI 314 (444)
T ss_pred HHHHHhhhhheeeeeecC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH--------HHHHHHHHHHHHHHHHHHHh
Confidence 555444444444443333 233444555566677888889999999999876 33332222222222222222
Q ss_pred cCCCchHHHHHHHHHHHHhhhhhhhhhhHhhhccC
Q 011781 431 DLGLPHWEIVGILTAGLALSSFALSGLYCTHQDIS 465 (477)
Q Consensus 431 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 465 (477)
..++.....+..++.|.+.+.. .+..+.+..++.
T Consensus 315 ~~~~~~~~~~~~~i~g~~~~~~-~~~~~am~ad~~ 348 (444)
T PRK09669 315 PPSNVWLIFALNILFNFIQNLT-TPLQWSMFSDVV 348 (444)
T ss_pred CcchHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhh
Confidence 2223323444445556665544 455666666554
No 102
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.81 E-value=2.8e-18 Score=170.38 Aligned_cols=347 Identities=12% Similarity=0.037 Sum_probs=214.6
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhc-----ChhHHHHHHHH
Q 011781 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFG-----GRKVLQTGVLI 188 (477)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g-----~r~~~~~~~~~ 188 (477)
..+.++...++..++.........+.+.+++|++.++++...++..+...+-.+ +|+++||++ ||+.++++.++
T Consensus 26 ~~~~~~~~~y~~qGl~~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l 104 (468)
T TIGR00788 26 VVLAIGLQVLFVKGIAGLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLL 104 (468)
T ss_pred hHHHHHHHHHHHhhHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHH
Confidence 344455556777777733344445557778999999999999999999988666 999999997 66666766655
Q ss_pred HH-HHHHHHHHhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHH---HHHhhhhhHHHHHHhhhHHhhc
Q 011781 189 WS-LATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVS---FVFGGLSFGSVAGLLLAPPIIE 264 (477)
Q Consensus 189 ~~-~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~---~~~~~~~~g~~ig~~~~~~l~~ 264 (477)
.+ ++...++...+......+..++.+++.+...++..+++.|..+ +++....+ +......+|.++|+.++|.+.+
T Consensus 105 ~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~ 183 (468)
T TIGR00788 105 GSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLD 183 (468)
T ss_pred HHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHH
Confidence 42 3322222112333344457899999999999999999999998 55544333 3334445899999999999999
Q ss_pred ccChhHHHHHHHHHHHHHHHHHHHhccCCcCCCCCCCCcch-h-hhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHH
Q 011781 265 NLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSN-Y-INMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMI 342 (477)
Q Consensus 265 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (477)
.++|+..|++.+++.++..+...+++|++.....+..++.. . ...........++ ......+.+++|.++...
T Consensus 184 ~~~~~~~f~~~a~l~ll~~~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~l~~~~i~~~l 258 (468)
T TIGR00788 184 KTLTRILFLITAALLLLQLFVSNLSKERRAFVRPRIGTYLEMNMALLTLGVLANVKV-----QILGLRGAIQLLEIAKPL 258 (468)
T ss_pred hcCcchHHHHHHHHHHHHHHHHHhcccccccccccccccchhhhhhhhhhHHHHHHH-----HHHHHHHHHhcHHHHHHH
Confidence 99999999999888877766666666653111111000000 0 0000000000000 001234567888888766
Q ss_pred HHHHH-hHHHHHHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhhh
Q 011781 343 YAHFC-GSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSP 421 (477)
Q Consensus 343 l~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~ 421 (477)
+..++ +.........+. .+..+.+|+++...|.+....+++.+++..+.+++.+|++.| +.+.....+..
T Consensus 259 ~fifl~~~~~~~~~~~~f-~~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r--------~~l~~~~~l~~ 329 (468)
T TIGR00788 259 IFIFLSYANLPGASGSVF-CATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYR--------LLFGVTTLLYT 329 (468)
T ss_pred HHHHHHHhhcCCCCceeE-EEEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHH--------HHHHHHHHHHH
Confidence 65555 322222221111 122345899999999999999999999999999988888755 44333333332
Q ss_pred HHHHhhhcc----c----CCCchHHHHHHHHHHHHhhhhhhhhhhHhhhccCccchhhhhhhc
Q 011781 422 AVCMTLSSI----D----LGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLYLE 476 (477)
Q Consensus 422 ~~~~~l~~~----~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~g~~~gl~ 476 (477)
...+..... . .+...++....++.+.+.+....+....+.+..+++++|+.+|+.
T Consensus 330 ~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~ 392 (468)
T TIGR00788 330 LSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALL 392 (468)
T ss_pred HHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHH
Confidence 222111100 0 011223333445556665666666666666667777799988763
No 103
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.81 E-value=2.1e-17 Score=156.46 Aligned_cols=335 Identities=12% Similarity=0.056 Sum_probs=210.5
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHhHHhhhh-hhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHH--
Q 011781 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSH-RFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWS-- 190 (477)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~-- 190 (477)
+....+....++.++..+...++.+...+ +.|+|.+++|.+.++..+...+.+++.|.++||+|.||-++....+..
T Consensus 7 ~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l 86 (412)
T PF01306_consen 7 KNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLL 86 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHT
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHH
Confidence 44445556666677778888888887665 589999999999999999999999999999999997776544332221
Q ss_pred HHH-HHH---HHhhchH-HHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcc
Q 011781 191 LAT-ALL---PLLAGFM-PGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN 265 (477)
Q Consensus 191 ~~~-~~~---~~~~~~~-~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~ 265 (477)
.+. ++. +....+. ...+++.+..|++.....|...+++.+.. ++.+.-.|-..+.+++|.+++..++|.+.+
T Consensus 87 ~~pff~~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L~~- 163 (412)
T PF01306_consen 87 FGPFFIYVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGILFN- 163 (412)
T ss_dssp CHHHHHHTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhheeee-
Confidence 111 111 1112222 23334444456666666677777776665 455667888999999999999999999986
Q ss_pred cChhHHHHHHHHHHHHHHHHHHHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHHHH
Q 011781 266 LGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAH 345 (477)
Q Consensus 266 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 345 (477)
.+-+..||+..+.+++..++....+.+.+++.+..+...... ++.+.....+++|+|++|.+.+..
T Consensus 164 i~p~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~l~k~~~fw~~~l~v 229 (412)
T PF01306_consen 164 INPNIIFWIASAAAIILLLLLLLLKPDVPPQAEVADALGAKK--------------DKVSLKDVLSLFKMRNFWFFVLFV 229 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSS---SSSSS-SSTTSSS--------------------HHHHHHHTTSHHHHHHHHHH
T ss_pred eCccHHHHHHHHHHHHHHHHHHHcCCcCchhhhhhcccccCC--------------CCCcHHHHHHHhcchhHHHHHHHH
Confidence 456778887766665555544444332222211111110000 000011235889999999998888
Q ss_pred HHhHHHHHHHhhhhhHHHHHhh---CCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhhhH
Q 011781 346 FCGSWGHYTCLSWLPTYFSEEL---SLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPA 422 (477)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~---g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~ 422 (477)
......+..+....+.|....+ +.+....|.+.+...+..++...+.+++.+|+|.| +.+++.+.+...
T Consensus 230 ~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k--------~~Lllag~i~~i 301 (412)
T PF01306_consen 230 IGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAK--------NLLLLAGVIMAI 301 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH--------HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChH--------hHHHHHHHHHHH
Confidence 7777777887777888876532 33456688899999999999999999999999987 444444444333
Q ss_pred HHHhhhcccCCCchHHHHHHHHHHHHhhhhhhhhhhHhhhccCccchhhhhhh
Q 011781 423 VCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLYL 475 (477)
Q Consensus 423 ~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~g~~~gl 475 (477)
=.....+ .++++++.+.=.+-+.-+..+.....-.+....+++..+++..+
T Consensus 302 -Ri~~~~~-~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v 352 (412)
T PF01306_consen 302 -RIIGSGF-ATNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLV 352 (412)
T ss_dssp -HHHHHHT---SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHH
T ss_pred -HHHHHhh-hcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHH
Confidence 3333333 22344444555566666666666666666666776666666543
No 104
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.81 E-value=2.6e-18 Score=169.65 Aligned_cols=302 Identities=17% Similarity=0.203 Sum_probs=213.1
Q ss_pred HhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhh----hhcChhHHH-HHHHHHHHHHHHHHHhhc-------h
Q 011781 135 VAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAK----IFGGRKVLQ-TGVLIWSLATALLPLLAG-------F 202 (477)
Q Consensus 135 ~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d----r~g~r~~~~-~~~~~~~~~~~~~~~~~~-------~ 202 (477)
...+.+.+.+|+++..+|++..+..+..++..|+.|.++| |+|||+.++ ++....+++..++....+ .
T Consensus 23 ~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~ 102 (428)
T PF13347_consen 23 YLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAK 102 (428)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhH
Confidence 3455677888999999999999999999999999999999 789876655 566777776666532212 1
Q ss_pred HHHHHHHHHHHHhhccchhhhHHHHhhhhcC-CcchhhHHHHHHhhhhhHHHHHHhhhHHhhccc-------ChhHHHHH
Q 011781 203 MPGLVLSRVLVGIGEGVSPSAATDLIARSIP-LEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL-------GWESVFYI 274 (477)
Q Consensus 203 ~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~-------g~~~~~~~ 274 (477)
...+.+..++..++......+..++..|+.+ +++|.+..+....+..+|..+...+.+.+.+.. +|++..++
T Consensus 103 ~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v 182 (428)
T PF13347_consen 103 LVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALV 182 (428)
T ss_pred HHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHH
Confidence 2235667777789999999999999999996 578999999999999998877777777665432 58888888
Q ss_pred HHHHHHHHHHHHHHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHHHHHHhHHHHHH
Q 011781 275 FGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYT 354 (477)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 354 (477)
.+++.++..++..+..++++++.++.++ +..-...++.+++||.++.+.+..++.......
T Consensus 183 ~~iv~~v~~~i~~~~~ke~~~~~~~~~~-------------------~~~~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~ 243 (428)
T PF13347_consen 183 LAIVGLVFFLITFFFVKERSVEVTEQEK-------------------KISLRDSLRSLFRNRPFRILLLAFFLQWLAFAL 243 (428)
T ss_pred HHHHHHHHhhhhhheeeecccccccccc-------------------ccccccchhhhcccchHHHHHHHHHHHHhhhhh
Confidence 8888777655555443331111111000 011123467889999999999999988888888
Q ss_pred HhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhhhHHHHhhhcccCCC
Q 011781 355 CLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGL 434 (477)
Q Consensus 355 ~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~~~~l~~~~~~~ 434 (477)
.....+.|.+..+|.+ ...+.+.....++.+++.+++++++||+|+| +.......+.....+.+......+
T Consensus 244 ~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~--------~~~~~~~~~~~~~~~~~~~~~~~~ 314 (428)
T PF13347_consen 244 MNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKK--------KVYIIGLLLAALGFLLLFFLGPGS 314 (428)
T ss_pred hhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccce--------eehhhhHHHHHHHHHHHHHHHhhh
Confidence 8888899998887777 5667778888999999999999999999987 333333333333333333332234
Q ss_pred chHHHHHHHHHHHHhhhhhhhhhhHhhhccC
Q 011781 435 PHWEIVGILTAGLALSSFALSGLYCTHQDIS 465 (477)
Q Consensus 435 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 465 (477)
..+..+...+.|.+.+... ...+.+..++.
T Consensus 315 ~~~~~i~~~l~gi~~~~~~-~~~~a~~ad~i 344 (428)
T PF13347_consen 315 PWLVLILFILAGIGYGAFF-VIPWAMLADVI 344 (428)
T ss_pred HHHHHHHHHHhHhhhcccc-cccccccccch
Confidence 5555666666677765555 45555555544
No 105
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.80 E-value=3.6e-17 Score=163.45 Aligned_cols=264 Identities=12% Similarity=0.067 Sum_probs=175.4
Q ss_pred HHHHHHHHhhhhHHHHhHHh-hhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhh----hhcCh-hHHHHHHHHHHHHH
Q 011781 120 SLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAK----IFGGR-KVLQTGVLIWSLAT 193 (477)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d----r~g~r-~~~~~~~~~~~~~~ 193 (477)
.++.+...+....+..+++. +.+.+|+++..+|.+..+.-+.-++..++.|.++| |+||| +.++.+....+++.
T Consensus 12 g~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~ 91 (473)
T PRK10429 12 GFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVL 91 (473)
T ss_pred ccchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHH
Confidence 34444445555555555444 66778999999999999999999999999999999 56985 55556666666665
Q ss_pred HHHHHhhc----h--HHHHHHHHHHHHhhccchhhhHHHHhhhhc-CCcchhhHHHHHHhhhhhHHHHHHhhhHHhhc--
Q 011781 194 ALLPLLAG----F--MPGLVLSRVLVGIGEGVSPSAATDLIARSI-PLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE-- 264 (477)
Q Consensus 194 ~~~~~~~~----~--~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~-- 264 (477)
.++ +..+ . +..+++..++.+++.........++..++. ++++|.+..++...+.++|..+++.+...+.+
T Consensus 92 ~ll-f~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~ 170 (473)
T PRK10429 92 FLL-FSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYV 170 (473)
T ss_pred HHH-HcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 544 3322 1 234555566777888888888999999998 68999999998777778776666655543322
Q ss_pred -----ccChhHHHHHHHHHHHHHHHHHHH-hccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHH
Q 011781 265 -----NLGWESVFYIFGLLGIAWFSGFKI-LQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAV 338 (477)
Q Consensus 265 -----~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (477)
..+|+....+.+++.++..+..++ .+|+...+..+..++++ .. .+..++.+++||.+
T Consensus 171 g~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~-~~----------------~~~~~~~~~~n~~~ 233 (473)
T PRK10429 171 GGGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEVYSSDNQVSAEGSH-LT----------------LKDIVALIYKNDQL 233 (473)
T ss_pred CCCchhhhHHHHHHHHHHHHHHHHHHHHcCceecCCccccccccccC-CC----------------HHHHHHHHhcCHHH
Confidence 124666666666665554444333 33332111100000000 00 01123556789988
Q ss_pred HHHHHHHHHhHHHHHHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhc
Q 011781 339 WAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIAT 402 (477)
Q Consensus 339 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~ 402 (477)
+.+++..++..........+.+.|.+...+ +....+.+.+...++.+++.++++++.||+|+|
T Consensus 234 ~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk 296 (473)
T PRK10429 234 SCLLGMALAYNIASNIINGFAIYYFTYVIG-DADLFPYYLSYAGAANLVTLILFPRLVKSLSRR 296 (473)
T ss_pred HHHHHHHHHHHHHHHHHhhheeeEEEEECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcH
Confidence 888888877777777766777766654333 555666777777788999999999999999987
No 106
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.79 E-value=9.9e-19 Score=162.25 Aligned_cols=354 Identities=18% Similarity=0.211 Sum_probs=225.8
Q ss_pred hHHHHHHHHHHHHHHHhhhhHHHHhHHhhhhhh-C-------CCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHH
Q 011781 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRF-G-------WNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQ 183 (477)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g-------~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~ 183 (477)
+.+.+.+..++.+....+...++...+.+...+ | +++...+.+..+..+|.++|++++|++.||+|||+++.
T Consensus 39 ~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG 118 (538)
T KOG0252|consen 39 HFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYG 118 (538)
T ss_pred HHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhh
Confidence 445566666778888888888888877765543 1 45567788999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhc-------hHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHH
Q 011781 184 TGVLIWSLATALLPLLAG-------FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGL 256 (477)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~ 256 (477)
..++++.++.++++ ++. -.+++...|++.|+|.|+-+|...+..+|...++.||...+...+..++|...|.
T Consensus 119 ~~liImIi~t~~~~-~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ 197 (538)
T KOG0252|consen 119 KELIIMIICSALSG-LSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGG 197 (538)
T ss_pred HHHHHHHHHHHHhc-cCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhcc
Confidence 99999988887554 331 2457889999999999999999999999999999999999998888888888777
Q ss_pred hhhHHhhcc----c-----------ChhHHHHHHHHHHHHHHHHHHHhccCCcCCCCCCCC-cchhhhhhhh----hhhh
Q 011781 257 LLAPPIIEN----L-----------GWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAP-RSNYINMKKS----LSAS 316 (477)
Q Consensus 257 ~~~~~l~~~----~-----------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~ 316 (477)
+++-.+... + =||..+.+..+.+++.+..-+.++|+++...-...+ +....+.++. ..++
T Consensus 198 ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~al~~~~~~~a~~d~~k~~~~~~~~~ 277 (538)
T KOG0252|consen 198 IVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRLKMPETARYTALVSKKLKQAAGDMKKVLSVDIEAE 277 (538)
T ss_pred HHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhHHHHhhcCHhhhhhccccccccccchh
Confidence 776555421 1 299888888777777777777777776544111100 0000000000 0000
Q ss_pred HH-hhccCCCCC---CHHHHhhc---HHHHHHHHHHHHhHHHHHHHhhhhhHHHHHhhCCchhhhHH--------HHHHH
Q 011781 317 LE-EMGESLKDV---PWKAIFRS---KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAW--------VSILP 381 (477)
Q Consensus 317 ~~-~~~~~~~~~---~~~~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~--------~~~~~ 381 (477)
.. +...+..+. .+...+.. +.+...+...|+...+++....+....+.+ .|+.+..... ...+.
T Consensus 278 ~~~~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~-ig~~~~~~~~~~~~~vA~~~~ii 356 (538)
T KOG0252|consen 278 STAESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSA-IGVIPSANTYHELFKVAEGNLII 356 (538)
T ss_pred hccccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccHHHHHHHh-hccCCCcchHHHHHHHHHHHHHH
Confidence 00 000011111 12233322 455566777888888888888888888864 5665544332 22222
Q ss_pred HH-HHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhhhHHHHhhhcccCCCch--HHHHHHHHHHHHhhhhhh-hhh
Q 011781 382 PL-ASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPH--WEIVGILTAGLALSSFAL-SGL 457 (477)
Q Consensus 382 ~~-~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~g~~~~~~~~-~~~ 457 (477)
.. +.+.|.++...++|++||+ .+...++.+..+..+.+....+... .-..++..+..+++.+.+ ...
T Consensus 357 a~~~~vPGyw~tv~~id~iGRk---------~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~tt 427 (538)
T KOG0252|consen 357 AVCSTVPGYWFTVYFIDIIGRK---------YIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATT 427 (538)
T ss_pred HHHccCCceeEEEEEeehhhhH---------HHHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCcee
Confidence 22 2334667778899999976 4455566665555555544333111 111222233333333332 234
Q ss_pred hHhhhccCccc-hhhhhhhc
Q 011781 458 YCTHQDISPEY-ASILLYLE 476 (477)
Q Consensus 458 ~~~~~~~~p~~-~g~~~gl~ 476 (477)
..+..+..|.+ ||+..|++
T Consensus 428 fivpaE~FParvR~t~hGIs 447 (538)
T KOG0252|consen 428 FIVPAEIFPARVRSTCHGIS 447 (538)
T ss_pred EEeehhhchHHHhhhhhhHH
Confidence 44556666655 99988874
No 107
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.79 E-value=3.8e-17 Score=153.29 Aligned_cols=246 Identities=12% Similarity=0.037 Sum_probs=174.0
Q ss_pred hhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcc-------------
Q 011781 199 LAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN------------- 265 (477)
Q Consensus 199 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~------------- 265 (477)
..++++.+++..++.|.|.+...+..+.++++..+++++++.+++.+.++++|.+++|.+++.+...
T Consensus 6 ~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~ 85 (310)
T TIGR01272 6 SQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATAN 85 (310)
T ss_pred HhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhh
Confidence 4466788999999999999999999999999999999999999999999999999999999987732
Q ss_pred ---cChhHHHHHHHHHHHHHHHHHHHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHH
Q 011781 266 ---LGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMI 342 (477)
Q Consensus 266 ---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (477)
..|+++|++.+++.++..+.+.+.+.++.++++. ++... ++ ....++.+++|.++...
T Consensus 86 ~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~~~~--~~~~~--------------~~---~~~~~~~~~~~~~~l~~ 146 (310)
T TIGR01272 86 AEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQEADV--ARVSS--------------GD---TTQKTSAFQFTHLVLGA 146 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcccc--ccccc--------------cc---ccchhhHHhhHHHHHHH
Confidence 3699999987777666555555553332211110 00000 00 00113567888999888
Q ss_pred HHHHHhHHHHHHHhhhhhHHHHHh--hCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhh
Q 011781 343 YAHFCGSWGHYTCLSWLPTYFSEE--LSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLS 420 (477)
Q Consensus 343 l~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~ 420 (477)
+..+++...+.+...|++.|+.+. +|+++.+++...+.+..+.++|+++.+++.||++++ +.+.... ..
T Consensus 147 ~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~--------~~l~~~~-~l 217 (310)
T TIGR01272 147 LGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQG--------RYLAFNA-FL 217 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH--------HHHHHHH-HH
Confidence 888888889999999999999754 689999999999999999999999999999999876 3333332 22
Q ss_pred hHHHHhhhcccCCCchHHHHHHHHHHHHhhhhhhhhhhHhhhccCccchhhhhhh
Q 011781 421 PAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLYL 475 (477)
Q Consensus 421 ~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~g~~~gl 475 (477)
.+++..+.... + ..+....++++|++.+...+.......+.. |++.+++.++
T Consensus 218 ~~~~~~l~~~~-~-~~~~~~~~~l~g~~~s~i~P~~~s~a~~~~-~~~~~~asai 269 (310)
T TIGR01272 218 AVLLSIGAALT-H-GYVAMWFVLALGLFNSIMFPTIFSLALNAL-GRHTSQGSGI 269 (310)
T ss_pred HHHHHHHHHHc-C-CHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-hhhhhhhHHH
Confidence 22222222222 1 233344555677776666654444444444 4555555543
No 108
>PRK09848 glucuronide transporter; Provisional
Probab=99.78 E-value=9.3e-17 Score=159.68 Aligned_cols=259 Identities=10% Similarity=0.027 Sum_probs=159.3
Q ss_pred HHHHHHHhhhhHHHHh-HHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhh----cChhHH-HHHHHHHHHHHH
Q 011781 121 LAFVICNMDKVNLSVA-IIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIF----GGRKVL-QTGVLIWSLATA 194 (477)
Q Consensus 121 ~~~~~~~~~~~~~~~~-~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~----g~r~~~-~~~~~~~~~~~~ 194 (477)
++.+..........++ .+++.+.+|+++.++|.+.++..+..++..+++|+++||. |||+.+ ..+.+...+...
T Consensus 15 ~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~ 94 (448)
T PRK09848 15 LGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSV 94 (448)
T ss_pred cchHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHH
Confidence 3444444444444444 4457777899999999999999999999999999999996 666654 445444443333
Q ss_pred HHHHhh----c--hHHHHHHHHHHHHhhccchhhhHHHHhhhhc-CCcchhhHHHHHHhhhh-----hHHHHHHhhhHHh
Q 011781 195 LLPLLA----G--FMPGLVLSRVLVGIGEGVSPSAATDLIARSI-PLEERSRAVSFVFGGLS-----FGSVAGLLLAPPI 262 (477)
Q Consensus 195 ~~~~~~----~--~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~-----~g~~ig~~~~~~l 262 (477)
++.... . .....++..++.+++.+...++..++..+.. ++++|.+..+....+.+ ++..++|.+++..
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~ 174 (448)
T PRK09848 95 LVFWVPTDWSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSS 174 (448)
T ss_pred HHHhCcCCCCcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 321111 1 1222344556778888888877777777666 44678887776654333 4555566665543
Q ss_pred hccc--ChhHHHHHHHHHHHHHHHHHH-HhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHH
Q 011781 263 IENL--GWESVFYIFGLLGIAWFSGFK-ILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVW 339 (477)
Q Consensus 263 ~~~~--g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (477)
.... +|.....+.+++.++..++.. ..+|+.+++. ++. .....++.+++||.++
T Consensus 175 g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~e~~~~~~----~~~-------------------~~~~~~~~l~~n~~f~ 231 (448)
T PRK09848 175 PEEMVSVYHFWTIVLAIAGMVLYFICFKSTRENVVRIV----AQP-------------------SLKISLQTLKRNRPLF 231 (448)
T ss_pred CCchhhhHHHHHHHHHHHHHHHHHHHHcCcEeccCCCc----cCC-------------------CHHHHHHHHhCCchHH
Confidence 2111 121111222222222222221 1222211100 000 0011256789999999
Q ss_pred HHHHHHHHhHHHHHHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhc
Q 011781 340 AMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIAT 402 (477)
Q Consensus 340 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~ 402 (477)
...+..++............|.|+++.+|.+....++......++.+++.++.+++.||+|+|
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~ 294 (448)
T PRK09848 232 MLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKK 294 (448)
T ss_pred HHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH
Confidence 988888888888888888888888888887776665555555677888899999999999876
No 109
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.77 E-value=1.4e-15 Score=149.63 Aligned_cols=308 Identities=16% Similarity=0.089 Sum_probs=216.6
Q ss_pred hhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHH-HHHHHHHh-hchHHHHHHHHHHHHhhccchhhhHHHH
Q 011781 150 VAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL-ATALLPLL-AGFMPGLVLSRVLVGIGEGVSPSAATDL 227 (477)
Q Consensus 150 ~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~l~g~~~~~~~~~~~~~ 227 (477)
..++..++..+...+..++.|.++|+-++||.++....+.++ +...+.+. .++++...++.++.-++.+......+++
T Consensus 71 ~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~ 150 (477)
T PF11700_consen 71 LWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAY 150 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346778888889999999999999999988877665554443 33444333 3444555556666667888888999999
Q ss_pred hhhhcCCcch--------------------------hhHHHHHHhhhhhHHHHHHhhhHHhhcc--------cChhHHHH
Q 011781 228 IARSIPLEER--------------------------SRAVSFVFGGLSFGSVAGLLLAPPIIEN--------LGWESVFY 273 (477)
Q Consensus 228 i~~~~~~~~r--------------------------~~~~~~~~~~~~~g~~ig~~~~~~l~~~--------~g~~~~~~ 273 (477)
+.++.+++++ ++..+.-....++|+++.-.+.-.+... .+.|..+.
T Consensus 151 LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~ 230 (477)
T PF11700_consen 151 LPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFL 230 (477)
T ss_pred hHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHH
Confidence 9999998888 8999999999999988877765554322 23588888
Q ss_pred HHHHHHHHHHHHHHHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHHHHHHhHHHHH
Q 011781 274 IFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHY 353 (477)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 353 (477)
+.++..++..+..++..++++.++..+... +. .....++- ...++++.|.|.+..+++..+++.-+..
T Consensus 231 ~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~-~~--~~~g~~~l---------~~t~k~~~~~~~~~~fLia~~l~~dg~~ 298 (477)
T PF11700_consen 231 IVALWWLVFSIPLFLWLPDRPGPRPLPSGS-SY--LRFGFKRL---------WRTFKEIRKLRQLFLFLIAYFLYSDGVN 298 (477)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCCCcch-hH--HHHHHHHH---------HHHHHHHHhChHHHHHHHHHHHHHHHHH
Confidence 888887776665555444333211111111 00 01111111 1124677788999999999999999999
Q ss_pred HHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhhhHHHHhhhc----
Q 011781 354 TCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSS---- 429 (477)
Q Consensus 354 ~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~~~~l~~---- 429 (477)
++......|..+.+|++..+...+.....+.+++|.+++|++.||+|.| .++.+.........+++....
T Consensus 299 ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k------~~~~l~~~l~~~~~i~~~g~~G~~~ 372 (477)
T PF11700_consen 299 TIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPK------TKRTLLISLILWIIIPLYGLFGFWP 372 (477)
T ss_pred HHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc------hhHHHHHHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999999999999999999999999999999999986 112332222222222222211
Q ss_pred --ccCCCchHHHHHHHHHHHHhhhhhhhhhhHhhhccCccchhhhhhh
Q 011781 430 --IDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLYL 475 (477)
Q Consensus 430 --~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~g~~~gl 475 (477)
....+.....+..+++|.+.++........+.+.+||++.+..+|+
T Consensus 373 ~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgl 420 (477)
T PF11700_consen 373 SFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGL 420 (477)
T ss_pred cccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHH
Confidence 1133444455666778888888888888888888899889988886
No 110
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.77 E-value=3.7e-22 Score=198.91 Aligned_cols=278 Identities=19% Similarity=0.241 Sum_probs=186.2
Q ss_pred HHHHHHHhhhhHHHHhHHhhh--hhhCCCc---------chhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHH
Q 011781 121 LAFVICNMDKVNLSVAIIPMS--HRFGWNS---------SVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIW 189 (477)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~--~~~g~s~---------~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 189 (477)
++.+..+++...++...+... ..++.+. .+.++..+...++..+|++++|.++||+|||+.+.++.++.
T Consensus 7 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~ 86 (451)
T PF00083_consen 7 LGGFLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLM 86 (451)
T ss_pred HHHHHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhccccccccccccccccccccccccccc
Confidence 344566666666655554433 2222222 34688999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhc---hHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhccc
Q 011781 190 SLATALLPLLAG---FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL 266 (477)
Q Consensus 190 ~~~~~~~~~~~~---~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~ 266 (477)
.++.++.. +++ +++.+.++|++.|++.|...+....++.|..|+++|++..++.+....+|..++..++..+....
T Consensus 87 ~i~~~~~~-~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~ 165 (451)
T PF00083_consen 87 IIGSILIA-FAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYS 165 (451)
T ss_pred cccccccc-ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 89888875 566 78999999999999999999999999999999999999999999999999999888876554433
Q ss_pred ---ChhHHHHHHHHHHHHHHHHHHHhccCCcCCCCCCCCcch--hhhhhh---hhhhhHHh----hccC-CCCCCHHHHh
Q 011781 267 ---GWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSN--YINMKK---SLSASLEE----MGES-LKDVPWKAIF 333 (477)
Q Consensus 267 ---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---~~~~~~~~----~~~~-~~~~~~~~~~ 333 (477)
+||+.+++.++..++..+...++||.++.-..+.+.++. ..+..+ ..+++.++ .++. ..+..+++++
T Consensus 166 ~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 245 (451)
T PF00083_consen 166 DNWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRDLF 245 (451)
T ss_pred ccccccccccccccccccccccccccccccceecccccccccccccccccccccccccccccccccccccccceeeeecc
Confidence 499999999888887777778888876543322211111 111100 00011111 1111 0113355666
Q ss_pred hcHH----HHHHHHHHHHh-HHHHHHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhc
Q 011781 334 RSKA----VWAMIYAHFCG-SWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIAT 402 (477)
Q Consensus 334 ~~~~----~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~ 402 (477)
+++. +...+...++. ..+......+.+.+++ ..+.+.. -.......+...++.++..++.||+|||
T Consensus 246 ~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr 316 (451)
T PF00083_consen 246 RNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFE-NAGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRR 316 (451)
T ss_pred cccccccccccccccccccccccccccccccccccc-ccccccc--cccccccccccccccccccccccccccc
Confidence 6643 22222222222 2222344455555554 4566665 2233445566677777788999999987
No 111
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.77 E-value=2.5e-16 Score=146.60 Aligned_cols=345 Identities=13% Similarity=0.101 Sum_probs=233.9
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHH
Q 011781 105 PWKNIPQRYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQT 184 (477)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~ 184 (477)
..|..++||.+++.+.+..+.+.+.+..+++...+....+| +...+-|...+|.+.++...+++-|+.||+|-|..+.+
T Consensus 36 ~~rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~ll 114 (480)
T KOG2563|consen 36 GHRVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLL 114 (480)
T ss_pred ccccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHH
Confidence 44566677777777777777777778778887777777788 77888899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhh-----chHH--HHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHh
Q 011781 185 GVLIWSLATALLPLLA-----GFMP--GLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLL 257 (477)
Q Consensus 185 ~~~~~~~~~~~~~~~~-----~~~~--~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~ 257 (477)
+..+.+++..+-...+ +.++ ....+..+.+.+..........+..-|+++++|..+..+-.++..+|.++|.+
T Consensus 115 gt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~l 194 (480)
T KOG2563|consen 115 GTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFL 194 (480)
T ss_pred HHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhh
Confidence 9999999887654322 2334 56677788888777776666677888999999999999999999999999999
Q ss_pred hhHHhhccc------ChhH--HHHHHHHHHHHHHHHHHHhccC-CcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCC
Q 011781 258 LAPPIIENL------GWES--VFYIFGLLGIAWFSGFKILQEG-ETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVP 328 (477)
Q Consensus 258 ~~~~l~~~~------g~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (477)
+...+..+- .|.. .|+..++++.+.++...+...+ ++.+......... +..-..+
T Consensus 195 lppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~~~~----------------~~~f~~s 258 (480)
T KOG2563|consen 195 LPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQAALQ----------------DASFPKS 258 (480)
T ss_pred ccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHhhhh----------------cCcHHHH
Confidence 888887543 3543 2443444443333333333222 2222111111100 0001223
Q ss_pred HHHHhhcHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccce
Q 011781 329 WKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTM 408 (477)
Q Consensus 329 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~ 408 (477)
.++.++|+.+..+.+...+....+++..+.+..-+.. -|++...+|.+.....+++++++.+.|.+.||..+-
T Consensus 259 i~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~~-sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~f------ 331 (480)
T KOG2563|consen 259 IKSCFKNRQFIILAICYGIGLGLFNSLSTLLNLALCP-SGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKF------ 331 (480)
T ss_pred HHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhcccc-ccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhH------
Confidence 5788999999888887777776767666666645543 577778899999999999999999999999998654
Q ss_pred ehhhhhHHhhhhhHHH-H--hhhcccCCCchHHHHHHHHHHHHhhhhhhhhhhHhhhccCccchhhhhhh
Q 011781 409 VRKICQTIAFLSPAVC-M--TLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLYL 475 (477)
Q Consensus 409 ~r~~~~~~~~~~~~~~-~--~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~g~~~gl 475 (477)
++...+.... ..+. + ..........+++.....++|.+..+..+...-.-.+...|..-|+-.|+
T Consensus 332 -k~~~~v~~~~-~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGl 399 (480)
T KOG2563|consen 332 -KLTTLVLYLF-ALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGL 399 (480)
T ss_pred -HHHHHHHHHH-HHHHHHHHHHhhccCCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCccccee
Confidence 2333332222 2222 2 22222233444555666677777666655444444444556555554443
No 112
>PRK11462 putative transporter; Provisional
Probab=99.75 E-value=2e-15 Score=149.91 Aligned_cols=257 Identities=12% Similarity=0.039 Sum_probs=171.7
Q ss_pred HHHHHHHhhhhHHHHh-HHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhh----hcChhHHH-HHHHHHHHHHH
Q 011781 121 LAFVICNMDKVNLSVA-IIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKI----FGGRKVLQ-TGVLIWSLATA 194 (477)
Q Consensus 121 ~~~~~~~~~~~~~~~~-~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr----~g~r~~~~-~~~~~~~~~~~ 194 (477)
++.+.........+.+ ...+.+.+|+++..+|.+..+.-+.-++..|+.|.++|| +||||.++ ++....+++..
T Consensus 16 ~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~ 95 (460)
T PRK11462 16 MGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCV 95 (460)
T ss_pred cchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHH
Confidence 3333344444445544 444778899999999999999999999999999999996 68876554 55566666665
Q ss_pred HHHHhhch------HHHHHHHHHHHHhhccchhhhHHHHhhhhcC-CcchhhHHHHHHhhhhhHHHHHHhhhHHhhccc-
Q 011781 195 LLPLLAGF------MPGLVLSRVLVGIGEGVSPSAATDLIARSIP-LEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL- 266 (477)
Q Consensus 195 ~~~~~~~~------~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~- 266 (477)
++ +..+. ...+.+..++..++.........++.+++.+ +++|.+..++...+..+|..+++.+...+.+..
T Consensus 96 ll-f~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g 174 (460)
T PRK11462 96 LA-YSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIG 174 (460)
T ss_pred HH-HhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 54 33321 2345556667788888888888899999885 789999999999999999888877766554432
Q ss_pred ------ChhHHHHHHHHHHHHHHHHHHHh-ccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHH
Q 011781 267 ------GWESVFYIFGLLGIAWFSGFKIL-QEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVW 339 (477)
Q Consensus 267 ------g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (477)
+|+....+.+++.++..++.+.. +|+.+. ++ ++.. . +..++.+++||.++
T Consensus 175 ~~~~~~g~~~~~~i~~ii~~i~~~i~~~~~kE~~~~-~~---~~~~---~----------------~~~l~~~~~Nk~~~ 231 (460)
T PRK11462 175 GDNKPLGFQGGIAVLSVVAFMMLAFCFFTTKERVEA-PP---TTTS---M----------------REDLRDIWQNDQWR 231 (460)
T ss_pred CCchhhhHHHHHHHHHHHHHHHHHHHHhcceeccCC-Cc---cCCC---H----------------HHHHHHHhCChHHH
Confidence 57776667666665554444332 222111 10 0000 0 01245778888887
Q ss_pred HHHHHHHHhHHHHHHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhc
Q 011781 340 AMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIAT 402 (477)
Q Consensus 340 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~ 402 (477)
.+....++..............|.+..+|. ....+.+.....++.+++.++++++.||+++|
T Consensus 232 ~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~-~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk 293 (460)
T PRK11462 232 IVGLLTIFNILAVCVRGGAMMYYVTWILGT-PEVFVAFLTTYCVGNLIGSALAKPLTDWKCKV 293 (460)
T ss_pred HHHHHHHHHHHHHHHHHhHhhhhhhhhcCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH
Confidence 776665555555444444444444443443 33445567777888899999999999999876
No 113
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.74 E-value=4e-15 Score=138.50 Aligned_cols=311 Identities=19% Similarity=0.175 Sum_probs=215.0
Q ss_pred hhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhc-----ChhHHHH-HHHHHHHHHHHHHH----hhc--------
Q 011781 140 MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFG-----GRKVLQT-GVLIWSLATALLPL----LAG-------- 201 (477)
Q Consensus 140 ~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g-----~r~~~~~-~~~~~~~~~~~~~~----~~~-------- 201 (477)
+..|++++....+.+.++..+.. ...+.+|..+|+.+ ||..++. +.++.+.+..+.+. ...
T Consensus 6 MIvEL~vpA~lv~~lval~~~~a-p~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~ 84 (403)
T PF03209_consen 6 MIVELGVPAWLVALLVALHYLVA-PLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGP 84 (403)
T ss_pred HHHHhccHHHHHHHHHHHHHHHH-HHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccc
Confidence 56789999999999999888776 46899999999998 7776655 44444443333221 122
Q ss_pred hHH---HHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHHH---H
Q 011781 202 FMP---GLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYI---F 275 (477)
Q Consensus 202 ~~~---~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~---~ 275 (477)
.+. ...+...+.|+|.+....+..+++.|..|+++|+++.++...+.-+|.+++..+.|.+.+.++..-..-+ .
T Consensus 85 ~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~ 164 (403)
T PF03209_consen 85 FWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGV 164 (403)
T ss_pred cHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHH
Confidence 211 2445667889999999999999999999999999999999999999999999999999988764333333 2
Q ss_pred HHHHHHHHHHHHHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHHHHHHhHHHHHHH
Q 011781 276 GLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTC 355 (477)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 355 (477)
+++.++..++..+-.|++..+.....++++. . ....+++++.+|....+++..++...+++.-
T Consensus 165 a~i~~~l~~ia~wg~E~r~~~~~~~~~~~~~-~----------------f~~a~~~~~~~~~a~~f~~fl~l~t~a~~~Q 227 (403)
T PF03209_consen 165 ALIALLLNLIALWGQEPRRSRRAAAAERPRP-P----------------FREAWRQVWASPQARRFFVFLFLGTLAFFMQ 227 (403)
T ss_pred HHHHHHHHHHHHHhcccCCcccccCCCCCCc-c----------------HHHHHHHHHhCCChhHHHHHHHHHHHHHHhh
Confidence 2233333333333333333222211111110 0 0123567778888888888888888888888
Q ss_pred hhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhH-HHhcCcccceehhhhhHHhhhhhHHHHhhhcccCCC
Q 011781 356 LSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADN-LIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGL 434 (477)
Q Consensus 356 ~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~r~~~~~~~~~~~~~~~~l~~~~~~~ 434 (477)
...+-+|--+.+|++..+...+.+..+.+.+++....|++..| .+++ |.....+.....+..+++..-...+
T Consensus 228 D~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~-------~~a~~G~~~~~~~f~lii~a~~~~~ 300 (403)
T PF03209_consen 228 DVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKK-------RTAALGCLLGALAFALIILAGPLGS 300 (403)
T ss_pred HHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCch-------HHHHHHHHHHHHHHHHHHHHHhccc
Confidence 8899999999999999999999999999999999999987664 3322 2222222222222222222222344
Q ss_pred chHHHHHHHHHHHHhhhhhhhhhhHhhhccCccchhhhhhh
Q 011781 435 PHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLYL 475 (477)
Q Consensus 435 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~g~~~gl 475 (477)
...+....+++|++.+.+.............+++.|..+|.
T Consensus 301 ~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~ 341 (403)
T PF03209_consen 301 PWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGA 341 (403)
T ss_pred chHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHH
Confidence 55667788899999888887777777777888889988874
No 114
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.73 E-value=5.4e-15 Score=140.24 Aligned_cols=362 Identities=15% Similarity=0.195 Sum_probs=218.9
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHh-HHhhhhhhC----CCcchhhHHHHHHHHHHHHhhhhhhhhhhhh-cChhHHHHHHH
Q 011781 114 KLIGTTSLAFVICNMDKVNLSVA-IIPMSHRFG----WNSSVAGLVQSSFFWGYALSQLPGGWLAKIF-GGRKVLQTGVL 187 (477)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g----~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~ 187 (477)
+-+..++..-+-.-++.+..... .-++..+++ ++.+++.-+.+.|....-+..+++|+++||+ |+|+.+..+.+
T Consensus 21 r~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGai 100 (498)
T COG3104 21 RGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAI 100 (498)
T ss_pred chHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHH
Confidence 33444444544444444333332 333444555 9999998888888888888999999999995 99999999999
Q ss_pred HHHHHHHHHHHhh-chHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcc--hhhHHHHHHhhhhhHHHHHHhhhHHhhc
Q 011781 188 IWSLATALLPLLA-GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEE--RSRAVSFVFGGLSFGSVAGLLLAPPIIE 264 (477)
Q Consensus 188 ~~~~~~~~~~~~~-~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~--r~~~~~~~~~~~~~g~~ig~~~~~~l~~ 264 (477)
++.++.++++..+ .....+++..++.++|.|..-+...+++.|.+|+++ |...++++.++.++|+.++|++.+++.+
T Consensus 101 l~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~ 180 (498)
T COG3104 101 LMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAI 180 (498)
T ss_pred HHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHH
Confidence 9999999886432 345788999999999999999999999999997543 7788999999999999999999999999
Q ss_pred ccChhHHHHHHHHHHHHHHHHHHHhccCCcCCCCCCCCcc----hhh-hhh-------hh---hhhhHHhh---------
Q 011781 265 NLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRS----NYI-NMK-------KS---LSASLEEM--------- 320 (477)
Q Consensus 265 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~-------~~---~~~~~~~~--------- 320 (477)
.+||...|.+.++-..+.++.+...++.-.......+... ... ... .. .....+..
T Consensus 181 ~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i 260 (498)
T COG3104 181 NYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSFNFLLPVLGGLVVMILAALLTLLLNQNTFSGVLLVISI 260 (498)
T ss_pred hhCHHHHHHHHHHHHHHHHHHHHHccchhcCCCCCCCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999988888777776666543222111111000 000 000 00 00000000
Q ss_pred -------ccCCCCCC-HHHHhhcHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHhhCCc----hhhhHHHHHHHHHHHHHH
Q 011781 321 -------GESLKDVP-WKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLN----LTEAAWVSILPPLASVLV 388 (477)
Q Consensus 321 -------~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~----~~~~g~~~~~~~~~~~~~ 388 (477)
.+.....+ ..+--|-.....+++...++...+....+.+..|..+..+.+ ....++..+...+.-++.
T Consensus 261 ~~~~~~~~~~~~~~~~~~er~r~~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~ 340 (498)
T COG3104 261 LIAIIYFAEAFRSPKVFDERRRLLAAIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILF 340 (498)
T ss_pred HHHHHHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHhhcccccceecCHHHHHhhCHHHHHHH
Confidence 00000000 001001111222333333444444444555555654432222 123457778888888888
Q ss_pred HHhhhhchhHHHhcCcccceehhhhhHHhhhhhHHHHhhhc---c---cC-CCchHHHHHHHHHHHHhhhhhhhhhhHhh
Q 011781 389 TSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSS---I---DL-GLPHWEIVGILTAGLALSSFALSGLYCTH 461 (477)
Q Consensus 389 ~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~~~~l~~---~---~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 461 (477)
.++..++-.|.++++.......|..+...+.....+++... . .. .+..|.+...++..++--...+.......
T Consensus 341 ~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t 420 (498)
T COG3104 341 SPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVT 420 (498)
T ss_pred HHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHH
Confidence 88888888887777654444455444333333333322222 1 11 22344455555555554444444444444
Q ss_pred hccCccchhhhhhh
Q 011781 462 QDISPEYASILLYL 475 (477)
Q Consensus 462 ~~~~p~~~g~~~gl 475 (477)
...|+.-.+.++|+
T Consensus 421 ~laP~~~~s~~ma~ 434 (498)
T COG3104 421 KLAPPALKSFIMAM 434 (498)
T ss_pred HhChHHHHHHHHHH
Confidence 44455447777764
No 115
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.73 E-value=1e-16 Score=159.57 Aligned_cols=289 Identities=16% Similarity=0.187 Sum_probs=225.8
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHH
Q 011781 113 YKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLA 192 (477)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 192 (477)
+.++.++.+..+...+....+...+..+.+.++++..+.|++.+.+-++..+...+..++.-|..|-+++-++.++++++
T Consensus 96 k~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lg 175 (735)
T KOG3626|consen 96 KMFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLG 175 (735)
T ss_pred chHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHH
Confidence 34566667777777777777888899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhc----------------------------------------------------hHHHHHHHHHHHHhhccch
Q 011781 193 TALLPLLAG----------------------------------------------------FMPGLVLSRVLVGIGEGVS 220 (477)
Q Consensus 193 ~~~~~~~~~----------------------------------------------------~~~~~~~~~~l~g~~~~~~ 220 (477)
.++.. +++ .+..++++.++.|+|....
T Consensus 176 sll~a-lPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi 254 (735)
T KOG3626|consen 176 SLLFA-LPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPI 254 (735)
T ss_pred HHHHh-ChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCC
Confidence 88874 220 0124677889999999999
Q ss_pred hhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhccc------------------C-hhHHHHHHHHHHHH
Q 011781 221 PSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL------------------G-WESVFYIFGLLGIA 281 (477)
Q Consensus 221 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~------------------g-~~~~~~~~~~~~~~ 281 (477)
++...+++-|...+++-+..+|+..+...+|.++|-++++++...+ | |...|++.+.+.++
T Consensus 255 ~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~ 334 (735)
T KOG3626|consen 255 FTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLF 334 (735)
T ss_pred ccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999886421 1 67788888888888
Q ss_pred HHHHHHHhccCCcCCCCCCCCcchhhhhhhhh-hhhHHhhccCCC--CCCHHHHhhcHHHHHHHHHHHHhHHHHHHHhhh
Q 011781 282 WFSGFKILQEGETSNGATLAPRSNYINMKKSL-SASLEEMGESLK--DVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSW 358 (477)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 358 (477)
..+.++++|+..++..++...++......+.. ........++.+ ....+++++||.+....+...+....+.++.+|
T Consensus 335 ~a~p~f~fPk~lp~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tF 414 (735)
T KOG3626|consen 335 SAVPLFFFPKELPKSQKRKRARDLHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYITF 414 (735)
T ss_pred HHHHHHhCcccCccccccchhhhhcccccccccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHHh
Confidence 88888888877665443211111100000000 000000000000 123578899999999999999999999999999
Q ss_pred hhHHHHHhhCCchhhhHHHHHHHHHH-HHHHHHhhhhchhHHHhc
Q 011781 359 LPTYFSEELSLNLTEAAWVSILPPLA-SVLVTSIAAQFADNLIAT 402 (477)
Q Consensus 359 ~~~~~~~~~g~~~~~~g~~~~~~~~~-~~~~~~~~g~l~dr~g~~ 402 (477)
+|.|++.++|.+...+..+.+..++. ..+|.+++|++.+|+.-+
T Consensus 415 lPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~ 459 (735)
T KOG3626|consen 415 LPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLS 459 (735)
T ss_pred hHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeeccc
Confidence 99999999999999999988776665 566778899999998443
No 116
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.70 E-value=1.1e-14 Score=139.35 Aligned_cols=319 Identities=14% Similarity=0.106 Sum_probs=222.9
Q ss_pred HHHHHHHHHHhhhhHHHHhHHh-hhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhh----hcChhH-HHHHHHHHHH
Q 011781 118 TTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKI----FGGRKV-LQTGVLIWSL 191 (477)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr----~g~r~~-~~~~~~~~~~ 191 (477)
.....-+...........++.. +.+.+|+++..+|.++.+.-+--++.-|+.|.++|| +||+|. ++.+.+-.++
T Consensus 16 ~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i 95 (467)
T COG2211 16 GYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAI 95 (467)
T ss_pred hhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHH
Confidence 3344444554555555555554 778899999999999999999999999999999996 676655 4455566666
Q ss_pred HHHHHHHhhc------hHHHHHHHHHHHHhhccchhhhHHHHhhhhc-CCcchhhHHHHHHhhhhhHHHHHHhhhHHhhc
Q 011781 192 ATALLPLLAG------FMPGLVLSRVLVGIGEGVSPSAATDLIARSI-PLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE 264 (477)
Q Consensus 192 ~~~~~~~~~~------~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~ 264 (477)
.+.++ +.++ .....++...+.+++......+..++.+++. +++||.+..+....+..+|..+...+.+.+..
T Consensus 96 ~~~l~-F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~ 174 (467)
T COG2211 96 VAVLL-FITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVK 174 (467)
T ss_pred HHHHH-HcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66555 3444 2345677788899999999999999999988 56899999999999999997777666655553
Q ss_pred -------ccChhHHHHHHHHHHHHHHHHHHHh-ccCCcCCCCCCC-CcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhc
Q 011781 265 -------NLGWESVFYIFGLLGIAWFSGFKIL-QEGETSNGATLA-PRSNYINMKKSLSASLEEMGESLKDVPWKAIFRS 335 (477)
Q Consensus 265 -------~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (477)
..||+....+.+++.++..+.+++- +|+..+....+. .+.+ .+..+..+++|
T Consensus 175 ~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~~~~~~-------------------~~~~~~~~~~N 235 (467)
T COG2211 175 LFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVVETQPTKTGVKLK-------------------LKDSFLLIFKN 235 (467)
T ss_pred HhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccCccccccc-------------------HHHHHHHHHcc
Confidence 3478888888888777766555544 343332221111 0000 01123467899
Q ss_pred HHHHHHHHHHHHhHHHHHHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhH
Q 011781 336 KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQT 415 (477)
Q Consensus 336 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~ 415 (477)
|.+...++..++...+.....+....|.+..+|.+.............+.+++.+++.++.+|+|+| +....
T Consensus 236 rp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk--------~~~~~ 307 (467)
T COG2211 236 RPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKK--------KLFLI 307 (467)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchH--------HHHHH
Confidence 9999998888888888888888888888888888888888888888888888899999999999987 44444
Q ss_pred HhhhhhHHHHhhhcccCCCchHHHHHHHHHHHHhhhhhhhhhhHhhhccC
Q 011781 416 IAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDIS 465 (477)
Q Consensus 416 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 465 (477)
...+.....+.+.... .+..++++...++.....+...+..+++..+..
T Consensus 308 ~~~~~~i~~~~~~f~~-~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~v 356 (467)
T COG2211 308 GLLLLAVGYLLLYFTP-AGSVVLIVVALIIAGVGTGIANPLPWAMVADTV 356 (467)
T ss_pred HHHHHHHHHHHHHhhc-CcchHHHHHHHHHHHHHhhccccccHHHhcchh
Confidence 4333333333333333 444555555545555556666677888777765
No 117
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.68 E-value=3.5e-18 Score=170.35 Aligned_cols=286 Identities=16% Similarity=0.228 Sum_probs=3.0
Q ss_pred HHHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHH
Q 011781 116 IGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATAL 195 (477)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 195 (477)
+..+++..+.+......+...++.+.++|+++.++.|++.+.+-++..+..++..++.+|..|-+++-.+.++++++.++
T Consensus 5 l~~~~~~~~~q~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l 84 (539)
T PF03137_consen 5 LVFLCLLGLFQMMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLL 84 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHH
Confidence 34455555566666677777788999999999999999999999999999999999999988888888999999988877
Q ss_pred HHHhhc--------------------------------------------------hHHHHHHHHHHHHhhccchhhhHH
Q 011781 196 LPLLAG--------------------------------------------------FMPGLVLSRVLVGIGEGVSPSAAT 225 (477)
Q Consensus 196 ~~~~~~--------------------------------------------------~~~~~~~~~~l~g~~~~~~~~~~~ 225 (477)
++ +++ .+..++++.++.|+|....++...
T Consensus 85 ~~-lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~ 163 (539)
T PF03137_consen 85 FA-LPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGI 163 (539)
T ss_dssp --------------------------------------------------------------------SSS---------
T ss_pred Hh-ccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCcccee
Confidence 63 211 023477889999999999999999
Q ss_pred HHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhccc---------------------C-hhHHHHHHHHHHHHHH
Q 011781 226 DLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL---------------------G-WESVFYIFGLLGIAWF 283 (477)
Q Consensus 226 ~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~---------------------g-~~~~~~~~~~~~~~~~ 283 (477)
+++-|..++++-+.++|+..+...+|.++|-++++.+...+ | |-..|++.+++.++..
T Consensus 164 tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~a 243 (539)
T PF03137_consen 164 TYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSA 243 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eeeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999876421 2 6667777888888888
Q ss_pred HHHHHhccCCcCCCCCCCCcch-hhhhhhhhhhhHHhh------cc--CCCCCCHHHHhhcHHHHHHHHHHHHhHHHHHH
Q 011781 284 SGFKILQEGETSNGATLAPRSN-YINMKKSLSASLEEM------GE--SLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYT 354 (477)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~------~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 354 (477)
+..+.+|+.-+...+....++. ..+.++...+..++. .+ +.-....+++++||.+....+..........+
T Consensus 244 ipl~~FPk~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G 323 (539)
T PF03137_consen 244 IPLFFFPKKLPGTSERQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVSG 323 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHcCCccCCCcccccchhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHH
Confidence 8888887765554211111100 000000000000000 01 11124467889999999999999999999999
Q ss_pred HhhhhhHHHHHhhCCchhhhHHHHHHHHH-HHHHHHHhhhhchhHHHhc
Q 011781 355 CLSWLPTYFSEELSLNLTEAAWVSILPPL-ASVLVTSIAAQFADNLIAT 402 (477)
Q Consensus 355 ~~~~~~~~~~~~~g~~~~~~g~~~~~~~~-~~~~~~~~~g~l~dr~g~~ 402 (477)
+.+++|.|++.+++.++..++++.+...+ ++++|.+++|++.+|+.-+
T Consensus 324 ~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~ 372 (539)
T PF03137_consen 324 FATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLS 372 (539)
T ss_dssp -------------------------------------------------
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCc
Confidence 99999999999999999999988877666 5778889999999998654
No 118
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.68 E-value=1.5e-14 Score=134.18 Aligned_cols=304 Identities=15% Similarity=0.068 Sum_probs=222.3
Q ss_pred cchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHH-HHHHhhc--hHHHHHHHHHHHHhhccchhhhH
Q 011781 148 SSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATA-LLPLLAG--FMPGLVLSRVLVGIGEGVSPSAA 224 (477)
Q Consensus 148 ~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~l~g~~~~~~~~~~ 224 (477)
.+..|...++..+...+..++.|.++|+.|+||.........++... ++.+.++ +++..++...+..++........
T Consensus 57 ~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfy 136 (438)
T COG2270 57 TAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFY 136 (438)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheeh
Confidence 34568888899999999999999999999988877665555554443 3333344 45566777788889989999999
Q ss_pred HHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhh--HHhh----------------cccChhHHHHHHHHHHHHHHHHH
Q 011781 225 TDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLA--PPII----------------ENLGWESVFYIFGLLGIAWFSGF 286 (477)
Q Consensus 225 ~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~--~~l~----------------~~~g~~~~~~~~~~~~~~~~~~~ 286 (477)
.+++.+..++++-++..++-.....+|+.+.-++. +.+. +...-|.++.+.++..++..+..
T Consensus 137 ds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm 216 (438)
T COG2270 137 DSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPM 216 (438)
T ss_pred hhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHH
Confidence 99999999999989988888777777777654442 1111 22346788888888877776666
Q ss_pred HHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHh
Q 011781 287 KILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEE 366 (477)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 366 (477)
+...++.++.. . ...+ ...+..++- ..+++++.+++.+..+.++.+++.-+..+...+-..|....
T Consensus 217 ~~~v~~~~~~~-~--~~~~--~l~~g~k~L---------~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~ 282 (438)
T COG2270 217 ILNVHDAEKIS-S--PPPT--ALRNGFKEL---------KSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAAD 282 (438)
T ss_pred Hhccccccccc-c--cchH--HHHHHHHHH---------HHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 65544443221 0 0000 001111111 11356778888899999999999999999999999999988
Q ss_pred hCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhhhHHHHhhhcccCCCchHHHHHHHHHH
Q 011781 367 LSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAG 446 (477)
Q Consensus 367 ~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g 446 (477)
+|++..+..++.....+.+++|++++|++.||+|.| +.+....++....++...... ...-..+..+++|
T Consensus 283 ~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k--------~vl~~~lvi~~~~~~~~~~~~--~~~~f~i~gll~g 352 (438)
T COG2270 283 LGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSK--------PVLMIGLVILSIAALYLIFLE--GELDFWILGLLVG 352 (438)
T ss_pred cCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc--------eeehHHHHHHHHHHHHHHHcc--ccHHHHHHHHHHH
Confidence 999999999999999999999999999999999887 444444444445555444443 2344455567888
Q ss_pred HHhhhhhhhhhhHhhhccCccchhhhhhh
Q 011781 447 LALSSFALSGLYCTHQDISPEYASILLYL 475 (477)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~p~~~g~~~gl 475 (477)
...++........+.+.+||++.|+.+|+
T Consensus 353 ~s~G~~qA~SRSy~~~lvp~~k~~~fFgl 381 (438)
T COG2270 353 TSLGGAQASSRSYLARLVPKGKEGRFFGL 381 (438)
T ss_pred HhcchHHHHHHHHHHHhCCCccccceeeh
Confidence 89899998899999999999999998886
No 119
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.63 E-value=6.4e-15 Score=144.67 Aligned_cols=159 Identities=19% Similarity=0.254 Sum_probs=128.6
Q ss_pred HHHHhHHhhhhhhCCCc--------chhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhc--
Q 011781 132 NLSVAIIPMSHRFGWNS--------SVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAG-- 201 (477)
Q Consensus 132 ~~~~~~~~~~~~~g~s~--------~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~-- 201 (477)
....+.+.+.++.|.++ ...+...++..++.+++.++.|+++||+|+|+++.++.++.+++..++.....
T Consensus 226 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~ 305 (418)
T TIGR00889 226 ITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEY 305 (418)
T ss_pred HHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcch
Confidence 34455566666666553 56799999999999999999999999999999999998888777655543222
Q ss_pred -hHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHH-hhhhhHHHHHHhhhHHhhcc------cChhHHHH
Q 011781 202 -FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVF-GGLSFGSVAGLLLAPPIIEN------LGWESVFY 273 (477)
Q Consensus 202 -~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~ig~~~~~~l~~~------~g~~~~~~ 273 (477)
+++.+++.+++.|++.+...+....++.+.+|+++|++++|+.+ ....+|.++||.++|.+.++ +||+..|.
T Consensus 306 ~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~ 385 (418)
T TIGR00889 306 FGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWL 385 (418)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHH
Confidence 23456778999999998888999999999999999999999997 67889999999999999987 46999999
Q ss_pred HHHHHHHHHHHHHHHhc
Q 011781 274 IFGLLGIAWFSGFKILQ 290 (477)
Q Consensus 274 ~~~~~~~~~~~~~~~~~ 290 (477)
+.+++.++..++..++.
T Consensus 386 ~~~~~~~i~~~l~~~~~ 402 (418)
T TIGR00889 386 FFAGYIAILAVLFMIFF 402 (418)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 88888777655554443
No 120
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.63 E-value=2.6e-13 Score=124.49 Aligned_cols=253 Identities=15% Similarity=0.108 Sum_probs=178.5
Q ss_pred HHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhch
Q 011781 123 FVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGF 202 (477)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~ 202 (477)
+.+.......-+++.-.+.+++|++..+++.+.........+...+.|.++||+|||+.-++..++++++++.- ..++
T Consensus 43 Y~La~~aDWLQGpY~Y~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k--~~~~ 120 (354)
T PF05631_consen 43 YLLAMAADWLQGPYLYALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTK--HSSN 120 (354)
T ss_pred HHHHHHHHHhhcchhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH--hccc
Confidence 33444556666676666667899999999999999999999999999999999999999998888888887654 4577
Q ss_pred HHHHHHHHHHHHhhccchhhhHHHHhhhhc-----CCcchhhHHHHHH-hhhhhHHHHHHhhhHHhhcccCh--hHHHHH
Q 011781 203 MPGLVLSRVLVGIGEGVSPSAATDLIARSI-----PLEERSRAVSFVF-GGLSFGSVAGLLLAPPIIENLGW--ESVFYI 274 (477)
Q Consensus 203 ~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~-----~~~~r~~~~~~~~-~~~~~g~~ig~~~~~~l~~~~g~--~~~~~~ 274 (477)
++.+++.|++.|++.+..+.+..++...-. |++..+.-++... ..+++-.+++.+++.++.+..+. ..+|..
T Consensus 121 ~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~ 200 (354)
T PF05631_consen 121 YPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDA 200 (354)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHH
Confidence 899999999999999999988888765433 3333344444444 33455566777777777776554 778888
Q ss_pred HHHHHHHHHHHHHHh-ccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHHHHHHhHHHHH
Q 011781 275 FGLLGIAWFSGFKIL-QEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHY 353 (477)
Q Consensus 275 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 353 (477)
..++.++..++.... +|+.....+. .+..+ .. ...++.+.+||+++.+.+...++-...+
T Consensus 201 a~~~l~~~~~~I~~~W~ENyg~~~~~-~~~~~------~~------------~~a~~~i~~d~ril~LG~~qslFE~smy 261 (354)
T PF05631_consen 201 AIVLLAVAAVLILKTWPENYGDTSSS-SSLSG------SF------------REAWRAILSDPRILLLGLIQSLFEGSMY 261 (354)
T ss_pred HHHHHHHHHHHHHhcccccCCCcccc-cchHH------HH------------HHHHHHHHcCchhHHHHHHHHHHHHHHH
Confidence 777776665554433 3332221111 10000 00 0124577889999999999988888888
Q ss_pred HHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhH
Q 011781 354 TCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADN 398 (477)
Q Consensus 354 ~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr 398 (477)
.+.....+-++. +-...-.|++++.++++.++|..+..++..+
T Consensus 262 ~FVflWtPaL~~--~~~~~P~GlIFssFM~a~MlGS~lf~~l~s~ 304 (354)
T PF05631_consen 262 LFVFLWTPALDP--DDEELPLGLIFSSFMVAMMLGSSLFSRLLSK 304 (354)
T ss_pred HheeeeeceecC--CCCCCCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence 777665555541 2223457899999999999999888765543
No 121
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.58 E-value=1.7e-13 Score=133.92 Aligned_cols=160 Identities=16% Similarity=0.112 Sum_probs=127.3
Q ss_pred hhHHHHhHHh-hhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhchHHHHHH
Q 011781 130 KVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVL 208 (477)
Q Consensus 130 ~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (477)
...+....|. +.+++|.++.+.+++.+...+..+++.++.|+++||+|+|+.+..+.....+..... ...++.+.+++
T Consensus 232 ~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~ 310 (393)
T PRK15011 232 NSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGM-LMAHSPAILLG 310 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH-HHHhhHHHHHH
Confidence 3334445665 456789999999999888888888899999999999999998877655544443333 34556666777
Q ss_pred HHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHHHHHHHHHHHHHHHHH
Q 011781 209 SRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKI 288 (477)
Q Consensus 209 ~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 288 (477)
.+++.+++.+...+....+..+..| +++++++++++...++|..++|.++|.+.+.+||+..|++.+++.++.++..++
T Consensus 311 ~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~ 389 (393)
T PRK15011 311 LQLLNAIYIGILGGIGMLYFQDLMP-GQAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLR 389 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCC-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHh
Confidence 8888888777777777788888887 569999999999999999999999999999999999999888888777777766
Q ss_pred hcc
Q 011781 289 LQE 291 (477)
Q Consensus 289 ~~~ 291 (477)
.++
T Consensus 390 ~~~ 392 (393)
T PRK15011 390 IKD 392 (393)
T ss_pred hcC
Confidence 643
No 122
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.57 E-value=2.7e-13 Score=132.84 Aligned_cols=162 Identities=20% Similarity=0.134 Sum_probs=132.0
Q ss_pred hhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhchHHHHHHH
Q 011781 130 KVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLS 209 (477)
Q Consensus 130 ~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (477)
......+.+.+..+.|. .+.++..+.+.++..++.++.|++.||+|+|+.+..+..+.+++.++.. ..++.+.+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 308 (399)
T PRK05122 232 FGTIATFITLYYAARGW--DGAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLW-LAPSPWMALIG 308 (399)
T ss_pred HHHHHHHHHHHHHHccc--ccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH-HhccHHHHHHH
Confidence 33344455555555665 3456777888899999999999999999999999888887777776664 45566677788
Q ss_pred HHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHHHHHHHHHHHHHHHHHh
Q 011781 210 RVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKIL 289 (477)
Q Consensus 210 ~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 289 (477)
.++.|++.+...+.....+.+..|+++|++++|+++....+|..+++.+.|.+.+..||++.|++.+++.++..+...++
T Consensus 309 ~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 388 (399)
T PRK05122 309 AALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLL 388 (399)
T ss_pred HHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHh
Confidence 89999999988888888888999999999999999999999999999999999999999999999888888777666666
Q ss_pred ccCCc
Q 011781 290 QEGET 294 (477)
Q Consensus 290 ~~~~~ 294 (477)
+++++
T Consensus 389 ~~~~~ 393 (399)
T PRK05122 389 YRRAP 393 (399)
T ss_pred ccccc
Confidence 55443
No 123
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.56 E-value=1.8e-13 Score=133.13 Aligned_cols=163 Identities=16% Similarity=0.019 Sum_probs=138.4
Q ss_pred HHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhh
Q 011781 121 LAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLA 200 (477)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~ 200 (477)
+..++.......+..+.|.+.+++|.++.++|++.++..++.+++.++.+++.||+|+|+.+.++.++..+...+++ ..
T Consensus 212 ~~~~l~~~~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~-~~ 290 (382)
T TIGR00902 212 AAVCLIQGAHAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIG-AI 290 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHH-hH
Confidence 33444455555566677777778999999999999999999999999999999999999999999999888887775 57
Q ss_pred chHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHH-hhhhhHHHHHHhhhHHhhcccChhHHHHHHHHHH
Q 011781 201 GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVF-GGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLG 279 (477)
Q Consensus 201 ~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~ig~~~~~~l~~~~g~~~~~~~~~~~~ 279 (477)
++.+.+++.+++.|++.+...+....++.+. |+++++++.++++ ...++|.++||.++|++.+++|+ ..|++.+++.
T Consensus 291 ~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~ 368 (382)
T TIGR00902 291 EAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIA 368 (382)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHH
Confidence 7778889999999999999999999999998 8889999999986 56789999999999999999997 5777777777
Q ss_pred HHHHHHH
Q 011781 280 IAWFSGF 286 (477)
Q Consensus 280 ~~~~~~~ 286 (477)
++.+++.
T Consensus 369 ~~~~~~~ 375 (382)
T TIGR00902 369 AAAFFLI 375 (382)
T ss_pred HHHHHHH
Confidence 6654443
No 124
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.56 E-value=4e-13 Score=135.10 Aligned_cols=170 Identities=12% Similarity=0.093 Sum_probs=126.5
Q ss_pred HHhhhhHHHHhHHhhh-hhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHH-HH-Hhhch
Q 011781 126 CNMDKVNLSVAIIPMS-HRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATAL-LP-LLAGF 202 (477)
Q Consensus 126 ~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~-~~-~~~~~ 202 (477)
..........+.|.+. +++|.+..+.++......++..++.++.|+++||+|||+.+..+.++..++... +. ..+++
T Consensus 262 ~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (490)
T PRK10642 262 TNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNV 341 (490)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 3344445555677654 668998888888888888999999999999999999999988776543333222 21 12344
Q ss_pred HHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhccc-ChhHHHHHHHHHHHH
Q 011781 203 MPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL-GWESVFYIFGLLGIA 281 (477)
Q Consensus 203 ~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~-g~~~~~~~~~~~~~~ 281 (477)
...+++.+++.|++.+........++.+.+|++.|++++|+......+++.++|.+.+++.+.. +|+.++++..+.+++
T Consensus 342 ~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i 421 (490)
T PRK10642 342 IGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVI 421 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHH
Confidence 5667778888888777777777888899999999999999865556677789999999988765 477777776666666
Q ss_pred HHHHHHHhccCCcC
Q 011781 282 WFSGFKILQEGETS 295 (477)
Q Consensus 282 ~~~~~~~~~~~~~~ 295 (477)
.++..++++|+++.
T Consensus 422 ~~~~~~~~pes~~~ 435 (490)
T PRK10642 422 GLITGVTMKETANR 435 (490)
T ss_pred HHHHHHHhccccCC
Confidence 66666677776654
No 125
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.56 E-value=2.5e-13 Score=127.61 Aligned_cols=182 Identities=17% Similarity=0.140 Sum_probs=154.2
Q ss_pred CchhHHHHHHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHH
Q 011781 109 IPQRYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLI 188 (477)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 188 (477)
..++++++..+....+........+.+.-|.+.+..|++...++++..++.++..+|+++.|++.|| +.|+.+.....+
T Consensus 207 ~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l 285 (394)
T COG2814 207 LLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLL 285 (394)
T ss_pred HhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHH
Confidence 3345566666666766677777788888888999999999999999999999999999999999999 999999988888
Q ss_pred HHHHHHHHHHhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccCh
Q 011781 189 WSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGW 268 (477)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~ 268 (477)
.++..+.+.+..++.+..++..++.|+............+++ ..|+.++.+.+++....++|..+|..++|.+.+++|+
T Consensus 286 ~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~ 364 (394)
T COG2814 286 LALALLALTFTGASPALALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALGY 364 (394)
T ss_pred HHHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhch
Confidence 888887777777777777778888888877777777777777 3358999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccC
Q 011781 269 ESVFYIFGLLGIAWFSGFKILQEG 292 (477)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~ 292 (477)
....++.+++.++.+++.+...+.
T Consensus 365 ~~~~~~~a~l~~~a~~~~~~~~~~ 388 (394)
T COG2814 365 AATGWVGAALLLLALLLALLSARK 388 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999888877776655443
No 126
>PRK03545 putative arabinose transporter; Provisional
Probab=99.56 E-value=2.5e-13 Score=132.62 Aligned_cols=154 Identities=18% Similarity=0.092 Sum_probs=124.4
Q ss_pred hHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHh
Q 011781 136 AIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGI 215 (477)
Q Consensus 136 ~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 215 (477)
..+.+.++.|.+..+.+++.+...++.+++.++.|++.||+++|+.. .+..+..++........++.+.++++.++.|+
T Consensus 228 ~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~ 306 (390)
T PRK03545 228 IEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLL-IAIALLLVCLLLLLPAANSEWHLSVLSIFWGI 306 (390)
T ss_pred HHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHH-HHHHHHHHHHHHHHHHhchHHHHHHHHHHHHH
Confidence 34445666899999999999999999999999999999999988654 44444444443333345666777888899999
Q ss_pred hccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHHHHHHHHHHHHHHHHHhcc
Q 011781 216 GEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQE 291 (477)
Q Consensus 216 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 291 (477)
+.+...+.....+.+..| ++|++++|+++....+|..+||+++|.+.+++|++..|++.+++.++..+......+
T Consensus 307 ~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (390)
T PRK03545 307 AIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIFR 381 (390)
T ss_pred HHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHcc
Confidence 887777778888888876 689999999999999999999999999999999999999998888776666555443
No 127
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.55 E-value=7.5e-14 Score=135.46 Aligned_cols=153 Identities=16% Similarity=0.124 Sum_probs=126.3
Q ss_pred hHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhc-hHHHHHHH
Q 011781 131 VNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAG-FMPGLVLS 209 (477)
Q Consensus 131 ~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 209 (477)
.......+.+.+++|.+..+.+++.++..++..++.++.|++.||+|||+.+.++.++.+++.++...... ....+++.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (377)
T TIGR00890 222 LLLIGLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLAT 301 (377)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHH
Confidence 33344455566788999989999999999999999999999999999999998888877777665543222 22234456
Q ss_pred HHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHHHHHHHHHHHH
Q 011781 210 RVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWF 283 (477)
Q Consensus 210 ~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~~~~~~~~~~ 283 (477)
.++.|++.+...+....++.|.+|+++|++++|+.+....+|..++|.+.|.+.+..||++.|++.+++.++.+
T Consensus 302 ~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 302 VALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTSL 375 (377)
T ss_pred HHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHhc
Confidence 77888888888888888999999999999999999999999999999999999999999999999887766643
No 128
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.55 E-value=1e-12 Score=126.35 Aligned_cols=250 Identities=17% Similarity=0.150 Sum_probs=167.9
Q ss_pred hHHHHHHHHHHHHHHHhhhhHHHHhHHhhhhh--hCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcC-hhHHHHHHHH
Q 011781 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHR--FGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGG-RKVLQTGVLI 188 (477)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~-r~~~~~~~~~ 188 (477)
+||.+.+..+..++.....+++.+..-.+.++ .+.+.+..|++.++..++..++++.+|+...|.+. |+.++.+.++
T Consensus 32 ~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii 111 (488)
T KOG2325|consen 32 NWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLI 111 (488)
T ss_pred chHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHH
Confidence 46788888888888888888887775555555 77888899999999999999999999999999986 8888889888
Q ss_pred HHHHHHHHHHh---hc-hHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhc
Q 011781 189 WSLATALLPLL---AG-FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE 264 (477)
Q Consensus 189 ~~~~~~~~~~~---~~-~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~ 264 (477)
..++.++.... ++ ..+.++++|++.|+|.+.. ...-+++++....++|.++++....+..+|.++||.+...+..
T Consensus 112 ~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~-a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~ 190 (488)
T KOG2325|consen 112 AIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNF-AVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTP 190 (488)
T ss_pred HHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccH-HHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhh
Confidence 88888777333 33 5678899999999996654 6778889988878899999999999888888888887766542
Q ss_pred c----c---------ChhHHHHHHHHHHHHHHHHHHH-hccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHH
Q 011781 265 N----L---------GWESVFYIFGLLGIAWFSGFKI-LQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWK 330 (477)
Q Consensus 265 ~----~---------g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (477)
. + -+..+-|+.+++.++.++...+ ++|..+....+..+.++. ++ .+..+.+..+.+
T Consensus 191 Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~~~~~~~~~~~---~~-----~~~~~~~~~~~d-- 260 (488)
T KOG2325|consen 191 LGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGIIDKKKRSVEE---EK-----SDIEKVKKPKLD-- 260 (488)
T ss_pred hcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccCccccccccchh---hc-----cchhhhccCChh--
Confidence 1 1 1345667777777766555444 444433332221111100 00 000001111111
Q ss_pred HHhhcHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHhhCCchhhhHH
Q 011781 331 AIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAW 376 (477)
Q Consensus 331 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 376 (477)
.+..+.+++..+...+.+....+..+.+....++.+..++-.
T Consensus 261 ----~~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~ 302 (488)
T KOG2325|consen 261 ----WVAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVL 302 (488)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHH
Confidence 123344445555555555555666666666667776555433
No 129
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.54 E-value=6.6e-14 Score=138.14 Aligned_cols=148 Identities=12% Similarity=0.047 Sum_probs=125.0
Q ss_pred hhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhhccchhh
Q 011781 143 RFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPS 222 (477)
Q Consensus 143 ~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~ 222 (477)
+.+.+..+.|++.++..++..++.+++|++.||+|+|+.+..+.++.+++.++.+ +.++.+.+++.+++.|++.+...+
T Consensus 256 ~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~-~~~~~~~~~~~~~l~g~~~~~~~~ 334 (420)
T PRK09528 256 TPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSG-FATGPLEVSILKLLHAFEVPFLLV 334 (420)
T ss_pred ccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHH-hcccHHHHHHHHHHHHHHHHHHHH
Confidence 3466777889999999999999999999999999999999988888888777664 456667788889999998888888
Q ss_pred hHHHHhhhhcCCcchhhHHHH-HHhhhhhHHHHHHhhhHHhhcccChhHHHHHHHHHHHHHHHHHHHhcc
Q 011781 223 AATDLIARSIPLEERSRAVSF-VFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQE 291 (477)
Q Consensus 223 ~~~~~i~~~~~~~~r~~~~~~-~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 291 (477)
....++.+.+|++.++...+. ++....+|.+++|.+.|++.+..||+..|.+.+++.++..++.++..+
T Consensus 335 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~ 404 (420)
T PRK09528 335 GVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLS 404 (420)
T ss_pred HHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhc
Confidence 888999999998888887665 677788999999999999999999999999988887766655554443
No 130
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.54 E-value=2.5e-13 Score=133.43 Aligned_cols=161 Identities=23% Similarity=0.077 Sum_probs=129.1
Q ss_pred hhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhchHHHHHH
Q 011781 129 DKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVL 208 (477)
Q Consensus 129 ~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (477)
.......+.|.+.++.|.+..+.+++.+...++..++.++.|++.||+|+|+.+..+.+...++.+++. ..++.+.+.+
T Consensus 235 ~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 313 (406)
T PRK11551 235 VLYFLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALA-AAPSFAGMLL 313 (406)
T ss_pred HHHHHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH-hcCcHHHHHH
Confidence 334445567787788999999999999999999999999999999999999998887666666555543 3445566677
Q ss_pred HHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhccc-ChhHHHHHHHHHHHHHHHHHH
Q 011781 209 SRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL-GWESVFYIFGLLGIAWFSGFK 287 (477)
Q Consensus 209 ~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~-g~~~~~~~~~~~~~~~~~~~~ 287 (477)
..++.|++.+...+...+++.+.+|+++|++++|+.+....+|..+||.++|.+.++. +|...+++.+.+.++..+..+
T Consensus 314 ~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (406)
T PRK11551 314 AGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAAL 393 (406)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHH
Confidence 7788888888888889999999999999999999999999999999999999998875 456666666555555555544
Q ss_pred Hhc
Q 011781 288 ILQ 290 (477)
Q Consensus 288 ~~~ 290 (477)
.+.
T Consensus 394 ~~~ 396 (406)
T PRK11551 394 LLV 396 (406)
T ss_pred HHh
Confidence 443
No 131
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.54 E-value=6.1e-14 Score=115.47 Aligned_cols=134 Identities=29% Similarity=0.508 Sum_probs=117.0
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCC
Q 011781 155 QSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPL 234 (477)
Q Consensus 155 ~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~ 234 (477)
.+.+.++..++.++.|++.||+|||+.+..+..+..++.+... ..++.+.+.+.+++.|++.+...+....++.|.+|+
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 82 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFA-LSSNITVLIIARFLQGFGAAFALVAGAALIADIYPP 82 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCCh
Confidence 3456778889999999999999999999998888777776664 456678888999999999999999999999999999
Q ss_pred cchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHHHHHHHHHHHHHHHHHh
Q 011781 235 EERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKIL 289 (477)
Q Consensus 235 ~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 289 (477)
++|++++++.+....+|..++|.+++.+.+..+|++.+++.+++.++..+...++
T Consensus 83 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (141)
T TIGR00880 83 EERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFL 137 (141)
T ss_pred hhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999999999999999999888777666555544
No 132
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.54 E-value=4.5e-13 Score=130.10 Aligned_cols=154 Identities=16% Similarity=0.151 Sum_probs=125.6
Q ss_pred HHhHHh-hhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHH
Q 011781 134 SVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVL 212 (477)
Q Consensus 134 ~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 212 (477)
....|. +.+++|.++.+.+++.+...+...++.++.|++.||+|+|+.+..+.++..+..... ...++.+.+++.+++
T Consensus 219 ~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 297 (375)
T TIGR00899 219 IINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGL-AADNSLWALLMLQLL 297 (375)
T ss_pred HhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 334444 457789999999999888887788889999999999999999888766655544443 244556777778889
Q ss_pred HHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHHHHHHHHHHHHHHHHHh
Q 011781 213 VGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKIL 289 (477)
Q Consensus 213 ~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 289 (477)
.|++.+...+....++.+..| +++++++++++....+|..++|.++|.+.+..||+..|++.+++.++..+...++
T Consensus 298 ~g~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 373 (375)
T TIGR00899 298 NAIFIGILAGIGMLYFQDLMP-GRAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLLLI 373 (375)
T ss_pred HHHHHHHHHHHHHHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhee
Confidence 999888888888888999887 5677999999999999999999999999999999999999888887776666554
No 133
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.54 E-value=1.4e-13 Score=135.42 Aligned_cols=161 Identities=19% Similarity=0.157 Sum_probs=128.3
Q ss_pred hhhHHHHhHHhhhhhhCCCcc----hhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhchHH
Q 011781 129 DKVNLSVAIIPMSHRFGWNSS----VAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMP 204 (477)
Q Consensus 129 ~~~~~~~~~~~~~~~~g~s~~----~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (477)
......+..+.+..+.+.+.. ..+.+.++..++..++.+..|++.||+|||+.+..+..+..++.+... ..++.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~-~~~~~~ 312 (408)
T PRK09874 234 ATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMS-FVQTPL 312 (408)
T ss_pred HHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHH-HhccHH
Confidence 334444555555555433333 245666677788889999999999999999999888777666665553 445567
Q ss_pred HHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHHHHHHHHHHHHH
Q 011781 205 GLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFS 284 (477)
Q Consensus 205 ~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~~~~~~~~~~~ 284 (477)
.+++.+++.|++.+...+...+.+.+..+++++|+.+++++....+|..+||.++|.+.+..||++.|++.+++.++..+
T Consensus 313 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~ 392 (408)
T PRK09874 313 QLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAV 392 (408)
T ss_pred HHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHH
Confidence 77888999999999999999999999999899999999999999999999999999999999999999999988887766
Q ss_pred HHHHhc
Q 011781 285 GFKILQ 290 (477)
Q Consensus 285 ~~~~~~ 290 (477)
..++..
T Consensus 393 ~~~~~~ 398 (408)
T PRK09874 393 YSWNSL 398 (408)
T ss_pred HHHHHH
Confidence 655443
No 134
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.54 E-value=5.5e-14 Score=130.34 Aligned_cols=186 Identities=18% Similarity=0.099 Sum_probs=147.8
Q ss_pred CCCCchhHHHHHHHHHHHHHHHhhhhHHHHhHHh-hhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhh--cChhHH
Q 011781 106 WKNIPQRYKLIGTTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIF--GGRKVL 182 (477)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~--g~r~~~ 182 (477)
..+..-+++.+..++++.++.+..+..+.-..|. +.+..|+|...+++..+++-++.+.|.+++|+++||+ |||...
T Consensus 244 ~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~ 323 (448)
T COG2271 244 FVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPM 323 (448)
T ss_pred HHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchH
Confidence 3344445577788888888999999888888877 6677899999999999999999999999999999995 677665
Q ss_pred HHHHHHHHHHHHHHHHhhc--hHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhh-HHHHHHhhh
Q 011781 183 QTGVLIWSLATALLPLLAG--FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSF-GSVAGLLLA 259 (477)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~ig~~~~ 259 (477)
.+...+....+++....++ +++...++.++.|+..-+..........|..|++..|.+.|+...+..+ |.+.+....
T Consensus 324 ~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~ 403 (448)
T COG2271 324 ALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPL 403 (448)
T ss_pred HHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcc
Confidence 5443333333333323443 3477788889999887777777778888999999999999999999998 999999999
Q ss_pred HHhhcccChhHHHHHHHHHHHHHHHHHHHhcc
Q 011781 260 PPIIENLGWESVFYIFGLLGIAWFSGFKILQE 291 (477)
Q Consensus 260 ~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 291 (477)
|++.|.+||...|++..+.++++.++...+..
T Consensus 404 g~i~d~~gW~g~Fi~~~~~a~l~~lll~~~~~ 435 (448)
T COG2271 404 GYIADTWGWDGGFIVLSIAALLAILLLLPVWN 435 (448)
T ss_pred eeeEecCCCcchHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999988887776665554433
No 135
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.53 E-value=5.8e-13 Score=137.26 Aligned_cols=139 Identities=12% Similarity=0.034 Sum_probs=116.9
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhc
Q 011781 153 LVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSI 232 (477)
Q Consensus 153 ~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~ 232 (477)
+...+..++.+++.++.|+++||+|||++++++.++.+++.++++ +.++...+++.+++.|++.+..++...++++|++
T Consensus 599 ~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~-~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~ 677 (742)
T TIGR01299 599 FVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLS-FGNSESAMIALLCLFGGLSIAAWNALDVLTVELY 677 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH-HHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 345567788899999999999999999999999999888887775 4444466777788888888888999999999999
Q ss_pred CCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHHHHHHHHHHHHHHHHHhccCC
Q 011781 233 PLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGE 293 (477)
Q Consensus 233 ~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (477)
|.+.|++++|+.++...+|.++||++++.+.+. +...+|++.+++.++.+++.+++||+.
T Consensus 678 Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll~~~LPET~ 737 (742)
T TIGR01299 678 PSDKRATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGLLALKLPDTR 737 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 999999999999999999999999999988764 466788888887777777777776543
No 136
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.52 E-value=6.5e-13 Score=129.69 Aligned_cols=168 Identities=14% Similarity=0.072 Sum_probs=120.7
Q ss_pred HHHHHHHHHHhhhhHHHHhHHhh-hhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChh--HHHH------HHHH
Q 011781 118 TTSLAFVICNMDKVNLSVAIIPM-SHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRK--VLQT------GVLI 188 (477)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~--~~~~------~~~~ 188 (477)
..++..+........+..+.|.+ .+++|.+..+.+++.+...++..++.++.|+++||+++|+ .... +.++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (399)
T TIGR00893 219 GLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLV 298 (399)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHH
Confidence 34444455555556666666664 5668999999999999999999999999999999999996 1111 1111
Q ss_pred HHHHHHHHHHhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccC-
Q 011781 189 WSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG- 267 (477)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g- 267 (477)
..+...... ..++.+..+...++.+++ ....+...+++.|.+|+++|++++|+.+....+|..++|.+.|.+.+..|
T Consensus 299 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~ 376 (399)
T TIGR00893 299 LSLLMFATN-YVNIPYAALALVALGFFG-LGAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGS 376 (399)
T ss_pred HHHHHHHhc-cchhHHHHHHHHHHHHhc-hhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCc
Confidence 111111110 112323333333444444 34789999999999999999999999999999999999999999999988
Q ss_pred hhHHHHHHHHHHHHHHHHHH
Q 011781 268 WESVFYIFGLLGIAWFSGFK 287 (477)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~ 287 (477)
|++.|++.+++.++..+..+
T Consensus 377 ~~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 377 FAGALMVVAALALIGALSYL 396 (399)
T ss_pred hhHHHHHHHHHHHHHHHHHH
Confidence 99999998887777655544
No 137
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.52 E-value=3.2e-13 Score=133.18 Aligned_cols=161 Identities=19% Similarity=0.111 Sum_probs=131.6
Q ss_pred HHHHhHHhhhhh-hCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhchHHHHHHHH
Q 011781 132 NLSVAIIPMSHR-FGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSR 210 (477)
Q Consensus 132 ~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (477)
.+....|.+.++ +|.+..+.|++.+...++..++.++.+++.||.++++.+..+.++.+++.+++. ..++.+...++.
T Consensus 241 ~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 319 (417)
T PRK10489 241 AVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFG-LMPMWILAVLCL 319 (417)
T ss_pred hHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHH-ccchHHHHHHHH
Confidence 344556666666 899999999999999999999999999999998888888887777777666553 556666677888
Q ss_pred HHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHHHHHHHHHHHHH-HHHHh
Q 011781 211 VLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFS-GFKIL 289 (477)
Q Consensus 211 ~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~~~~~~~~~~~-~~~~~ 289 (477)
++.|++.+...+...+++.+..|++.||+++|+++....+|..+||.+.|.+.+..|++..+++.+++.++..+ ....+
T Consensus 320 ~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 399 (417)
T PRK10489 320 ALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVL 399 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhc
Confidence 88999888777888889999999899999999999999999999999999999999999888887776655444 44444
Q ss_pred ccCC
Q 011781 290 QEGE 293 (477)
Q Consensus 290 ~~~~ 293 (477)
++.+
T Consensus 400 ~~~~ 403 (417)
T PRK10489 400 GELR 403 (417)
T ss_pred cccc
Confidence 4443
No 138
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.51 E-value=7.3e-13 Score=127.13 Aligned_cols=165 Identities=28% Similarity=0.356 Sum_probs=143.6
Q ss_pred HHHHHhhhhHHHHhHHhhhhhh-CCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChh-HHHHHHHHHHHHHHHHHHhh
Q 011781 123 FVICNMDKVNLSVAIIPMSHRF-GWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRK-VLQTGVLIWSLATALLPLLA 200 (477)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~-g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~-~~~~~~~~~~~~~~~~~~~~ 200 (477)
.+.............|.+.++. |.+..+.++..+...++..++.++.+++.||+|+|+ .+..+..+..++.+... ..
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~ 262 (352)
T cd06174 184 FFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLA-LA 262 (352)
T ss_pred HHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH-Hh
Confidence 3444455566666677766554 999999999999999999999999999999999999 99888888888877774 45
Q ss_pred chHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHHHHHHHHH
Q 011781 201 GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGI 280 (477)
Q Consensus 201 ~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~~~~~~~ 280 (477)
++.+.+++..++.|++.+...+....++.+..|+++|++.+|+.+....+|..++|.+.+.+.+..+|++.+++.+++.+
T Consensus 263 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~ 342 (352)
T cd06174 263 PSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALAL 342 (352)
T ss_pred ccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHH
Confidence 55678889999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred HHHHHHHH
Q 011781 281 AWFSGFKI 288 (477)
Q Consensus 281 ~~~~~~~~ 288 (477)
+..+..++
T Consensus 343 i~~i~~~~ 350 (352)
T cd06174 343 LAALLLLL 350 (352)
T ss_pred HHHHHhee
Confidence 87666543
No 139
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.51 E-value=3.6e-12 Score=124.25 Aligned_cols=339 Identities=17% Similarity=0.105 Sum_probs=211.5
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcc-hhhHHHHHH----HHHHHHhhhhhhhhhhhhcChhHHHHHHH
Q 011781 113 YKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSS-VAGLVQSSF----FWGYALSQLPGGWLAKIFGGRKVLQTGVL 187 (477)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~-~~g~~~~~~----~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 187 (477)
+......++-.+...+.........+.....++.... ..+...... .+...+.++..|.++||+|||..+....+
T Consensus 21 ~~~~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~ 100 (463)
T KOG2816|consen 21 RHLEPLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRYGRKVVLLLPLF 100 (463)
T ss_pred hHHHHHHHHHHHHHHhcCcchhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhhhhhhhHHHHHH
Confidence 3445555555555556555555555555554443322 223333333 67788899999999999999999998877
Q ss_pred HHHHHHHHHHHhhchHHHHHHHHHHHHhh--ccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcc
Q 011781 188 IWSLATALLPLLAGFMPGLVLSRVLVGIG--EGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN 265 (477)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~~--~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~ 265 (477)
...+..++.. +.. +|.++ +.++. .+.......++++|....++|...+|+.+.....+..++|.+++.+.+.
T Consensus 101 ~~~l~~~~~~-~~~-~~~~~----~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~ 174 (463)
T KOG2816|consen 101 GTILPALCLL-FQG-YWFFL----LLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKF 174 (463)
T ss_pred HHHHhHHHHH-HHH-HHHhh----hcccccchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 7666665553 333 33333 44433 3456778889999999999999999999999999999999999999999
Q ss_pred cChhHHHHHHHHHHHHHHHHHH-HhccCCcCCCCCC-CCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHH
Q 011781 266 LGWESVFYIFGLLGIAWFSGFK-ILQEGETSNGATL-APRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIY 343 (477)
Q Consensus 266 ~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 343 (477)
.|...+|.+..+..++..+... +++|+..++++.. ...+.... ........+ . .......-.+|..+.+++
T Consensus 175 ~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~~~~~~-~~~~~~~~~----~--~~~~~~~~~~r~~l~l~l 247 (463)
T KOG2816|consen 175 LGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLRELTPG-SLDSSHVAD----A--FQSLTKVGPDRLLLLLLL 247 (463)
T ss_pred cCchHHHHHHHHHHHHHHHHHhhccccccCccccccccccccCCC-cccchhhhh----h--hhhhcccCCCccchHHHH
Confidence 9999999998888777655444 4455443333221 00000000 000000000 0 000111223455555555
Q ss_pred HHHHhHHHHHHHhh-hhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhh-hchhHHHhcCcccceehhhhhHHhhhhh
Q 011781 344 AHFCGSWGHYTCLS-WLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAA-QFADNLIATGVETTMVRKICQTIAFLSP 421 (477)
Q Consensus 344 ~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g-~l~dr~g~~~~~~~~~r~~~~~~~~~~~ 421 (477)
..++.......-.. .++.|+...++++..+.+.+.+..+....++.++.. .+...+|.+ + ....++..-
T Consensus 248 ~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~--------~-~i~lGl~~~ 318 (463)
T KOG2816|consen 248 VAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEK--------R-LISLGLLSE 318 (463)
T ss_pred HHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--------h-HhhHHHHHH
Confidence 55554444433222 557788888999999999999999999999888776 667777665 3 555566655
Q ss_pred HHHHhhhcccCCCchHHHHHHHHHHHHhhhhhhhhhhHhhhccCccchhhhhhh
Q 011781 422 AVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLYL 475 (477)
Q Consensus 422 ~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~g~~~gl 475 (477)
.+...+..+. +..|.......+........+.........+.++++|.++++
T Consensus 319 ~~~~~~~af~--~~~w~~~~~~v~~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~ 370 (463)
T KOG2816|consen 319 FLQLLLFAFA--TETWMMFAAGVVVALAGIVFPAIRAFASILVSPEEQGKVFGI 370 (463)
T ss_pred HHHHHHHHHh--ccchhhhHHHHHHHhhcchhHHHHhHHHhhcccccccchhhH
Confidence 6666555554 233443333334444344444444445555778889999876
No 140
>PRK12382 putative transporter; Provisional
Probab=99.51 E-value=1.4e-12 Score=127.56 Aligned_cols=158 Identities=20% Similarity=0.190 Sum_probs=129.9
Q ss_pred hhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhchHHHHHH
Q 011781 129 DKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVL 208 (477)
Q Consensus 129 ~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (477)
.......+.+.+.++.|.+ ..++..+.+.++..+++++.|++.||+|+|+.+..+..+.+++.++.. ..++.+.+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 307 (392)
T PRK12382 231 GFAVIGTFVSLYFASKGWA--MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLW-LAPTAWVALA 307 (392)
T ss_pred HHhHHHHHHHHHHHhcCCc--hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHH-HcccHHHHHH
Confidence 3334445555555666655 356667778888889999999999999999999988888777776654 4556677778
Q ss_pred HHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHHHHHHHHHHHHHHHHH
Q 011781 209 SRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKI 288 (477)
Q Consensus 209 ~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 288 (477)
..++.|++.+...+.....+.+.+|+++|++++|+++....+|..+||.+.|++.++.||++.|.+.+++.++..+....
T Consensus 308 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 387 (392)
T PRK12382 308 GAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTIL 387 (392)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHh
Confidence 88999999888888888899999999999999999999999999999999999999999999999998888776665554
Q ss_pred h
Q 011781 289 L 289 (477)
Q Consensus 289 ~ 289 (477)
.
T Consensus 388 ~ 388 (392)
T PRK12382 388 S 388 (392)
T ss_pred h
Confidence 4
No 141
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.50 E-value=1.4e-12 Score=127.00 Aligned_cols=155 Identities=15% Similarity=0.147 Sum_probs=126.6
Q ss_pred hHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhchHHHHHHHH
Q 011781 131 VNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSR 210 (477)
Q Consensus 131 ~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (477)
.....++|.+.++.|.+..+.++..++..++.++++++.|++.||+|+|+++..+..+..++.+.. .. . .......
T Consensus 217 ~~~~~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~--~~-~-~~~~~~~ 292 (381)
T PRK03633 217 GSLYGLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAM--LS-Q-AAMAPAL 292 (381)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHH--hh-h-HHHHHHH
Confidence 334455777777889999999999999999999999999999999999999988877766655443 22 2 3344566
Q ss_pred HHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHHHHHHHHHHHHHHHHHh
Q 011781 211 VLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKIL 289 (477)
Q Consensus 211 ~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 289 (477)
++.|++.....|...+.+.+..|+++++...+......++|.++||.++|++.++.||++.|++.+.+.++..+..++.
T Consensus 293 ~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~ 371 (381)
T PRK03633 293 FILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLMLLRK 371 (381)
T ss_pred HHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHhc
Confidence 7788877778899999999999888888888888889999999999999999999999999999888877665555444
No 142
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.50 E-value=8.8e-13 Score=131.86 Aligned_cols=173 Identities=14% Similarity=0.061 Sum_probs=127.2
Q ss_pred HHHHHHHHHHHhhhhHHHHhHHh-hhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHH
Q 011781 117 GTTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATAL 195 (477)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 195 (477)
..+++..++..........+.|. +.+++|++..+.++..+...++..++.+++|+++||+|+|+.+.....+..++..+
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~ 340 (467)
T PRK09556 261 WLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTL 340 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHH
Confidence 33444444555555556667776 45679999999999999999999999999999999999998776654443333222
Q ss_pred HH-HhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhh-HHHHHHhhhHHhhc---------
Q 011781 196 LP-LLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSF-GSVAGLLLAPPIIE--------- 264 (477)
Q Consensus 196 ~~-~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~ig~~~~~~l~~--------- 264 (477)
.. ...++...+.+.+++.|++.............|.+|++.+|.+.|+.+...++ |.+++|.+.|.+.+
T Consensus 341 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~ 420 (467)
T PRK09556 341 GVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIF 420 (467)
T ss_pred HHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccc
Confidence 21 12344455667778888654444334446677999999999999999999886 77999999999999
Q ss_pred ---ccChhHHHHHHHHHHHHHHHHHHHh
Q 011781 265 ---NLGWESVFYIFGLLGIAWFSGFKIL 289 (477)
Q Consensus 265 ---~~g~~~~~~~~~~~~~~~~~~~~~~ 289 (477)
..||+..|++.+++.++..+...++
T Consensus 421 ~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 448 (467)
T PRK09556 421 GYTLTGWAGTFAALDIAAIGCICLMAIV 448 (467)
T ss_pred cccccChHHHHHHHHHHHHHHHHHHHHH
Confidence 5789999999877777765555544
No 143
>PRK03699 putative transporter; Provisional
Probab=99.50 E-value=1.4e-12 Score=127.56 Aligned_cols=169 Identities=14% Similarity=0.183 Sum_probs=132.6
Q ss_pred HHHHHHHhhhhHHHHhHHhhh-hhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHh
Q 011781 121 LAFVICNMDKVNLSVAIIPMS-HRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLL 199 (477)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 199 (477)
+..++.......+..+.|.+. +++|++..+.+++.+.+.++..++.++.|+++||+++|+.+.....+..+...+.. .
T Consensus 212 ~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~-~ 290 (394)
T PRK03699 212 IAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFV-N 290 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHH-H
Confidence 333444444445556677655 67899999999999999999999999999999999999998877766555554443 4
Q ss_pred hchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHHHHHHHH
Q 011781 200 AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLG 279 (477)
Q Consensus 200 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~~~~~~ 279 (477)
.++.+.+.+..++.|++.+..++...++..+..+ +++++..+.......+|..++|.+.|.+.+..|++..+++.+++.
T Consensus 291 ~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~ 369 (394)
T PRK03699 291 TDDPSHLLYAILGLGFFSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLY 369 (394)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHH
Confidence 4555566667788898888888888888887776 556788899999999999999999999999999999999888887
Q ss_pred HHHHHHHHHhcc
Q 011781 280 IAWFSGFKILQE 291 (477)
Q Consensus 280 ~~~~~~~~~~~~ 291 (477)
++..+......+
T Consensus 370 ~~~~~~~~~~~~ 381 (394)
T PRK03699 370 AVVFVMCILLGF 381 (394)
T ss_pred HHHHHHHHHHHH
Confidence 776655555544
No 144
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.49 E-value=3.8e-12 Score=124.33 Aligned_cols=164 Identities=14% Similarity=0.031 Sum_probs=126.0
Q ss_pred HHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhchH
Q 011781 124 VICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFM 203 (477)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~ 203 (477)
++..........+.|.+.+++|.+..+.|...+++.++.+++.++.|++.||+|+|+.+..+..+..++.+++....++.
T Consensus 215 ~~~~~~~~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 294 (393)
T PRK09705 215 GLINGGYASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQL 294 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchH
Confidence 33444555566667776677899999999999999999999999999999999999998888777666665543333332
Q ss_pred HHHHHHHHHHHhhccchhhhHHHHhhhhcC-CcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccC-hhHHHHHHHHHHHH
Q 011781 204 PGLVLSRVLVGIGEGVSPSAATDLIARSIP-LEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG-WESVFYIFGLLGIA 281 (477)
Q Consensus 204 ~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g-~~~~~~~~~~~~~~ 281 (477)
..+ ..++.|++.+...+.......+..+ ++++++.+|+.+....++..++|.+.|++.+..| |...|++.+++.++
T Consensus 295 ~~~--~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~ 372 (393)
T PRK09705 295 PVL--WAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVG 372 (393)
T ss_pred HHH--HHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHH
Confidence 222 2356688888888877777777774 5789999999999999999999999999999876 77778777766666
Q ss_pred HHHHHHHh
Q 011781 282 WFSGFKIL 289 (477)
Q Consensus 282 ~~~~~~~~ 289 (477)
..+....+
T Consensus 373 ~~~~~~~~ 380 (393)
T PRK09705 373 LMIITLRF 380 (393)
T ss_pred HHHHHHHh
Confidence 55544443
No 145
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.48 E-value=6.9e-13 Score=132.06 Aligned_cols=176 Identities=13% Similarity=0.037 Sum_probs=118.9
Q ss_pred HHHHHHHHHhhhhHHHHhHHhhhh-hhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhh--cChhHHH-HHHHHHHHHHH
Q 011781 119 TSLAFVICNMDKVNLSVAIIPMSH-RFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIF--GGRKVLQ-TGVLIWSLATA 194 (477)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~--g~r~~~~-~~~~~~~~~~~ 194 (477)
..+..++..........++|.+.+ +.|.+..+.+++..++.++..++.++.|+++||+ +||+... ....+..++.+
T Consensus 258 ~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~ 337 (452)
T PRK11273 258 IAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATI 337 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHH
Confidence 333333444444455567777554 5789999999999999999999999999999999 5554322 22222233322
Q ss_pred HHHHh-hchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHH-HHhhhHHhhcccChhHHH
Q 011781 195 LLPLL-AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVA-GLLLAPPIIENLGWESVF 272 (477)
Q Consensus 195 ~~~~~-~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~i-g~~~~~~l~~~~g~~~~~ 272 (477)
++... ..+.+..+++.++.|.+..........+..+.+|+++||+++|+.+....+|+.+ +|.++|.+.++.||+..|
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f 417 (452)
T PRK11273 338 VYWLNPAGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGF 417 (452)
T ss_pred HHHHhcccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHH
Confidence 22111 2233334445555555433333344456779999999999999999988888654 799999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhccCCc
Q 011781 273 YIFGLLGIAWFSGFKILQEGET 294 (477)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~ 294 (477)
++.++++++.++....+...++
T Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~ 439 (452)
T PRK11273 418 MVMIGGSILAVILLIVVMIGEK 439 (452)
T ss_pred HHHHHHHHHHHHHHHHHhcccc
Confidence 9988887777666665554443
No 146
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.48 E-value=1.7e-12 Score=128.60 Aligned_cols=171 Identities=14% Similarity=0.021 Sum_probs=116.4
Q ss_pred HHHHHHHHhhhhHHHHhHHhhh-hhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhh--cChhHH-HHHHHHHHHHHHH
Q 011781 120 SLAFVICNMDKVNLSVAIIPMS-HRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIF--GGRKVL-QTGVLIWSLATAL 195 (477)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~--g~r~~~-~~~~~~~~~~~~~ 195 (477)
.+..+...........+.|.+. +++|++..+.+...+.+.++..++.++.|+++||+ ++|+.. ....+...+....
T Consensus 249 ~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~ 328 (434)
T PRK11663 249 SFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGS 328 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHH
Confidence 3334444444555556666655 67899999999999999999999999999999998 333332 2211111111111
Q ss_pred HH-HhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHHH
Q 011781 196 LP-LLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYI 274 (477)
Q Consensus 196 ~~-~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~ 274 (477)
.. ....+.....+..+..|++...........+.+.+|+++|++++|+.+....+|.+++|.+.|++.++.||+..|++
T Consensus 329 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~ 408 (434)
T PRK11663 329 LWLMPFASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVV 408 (434)
T ss_pred HHHcccccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHH
Confidence 11 11222233333444455443333333445678889989999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhc
Q 011781 275 FGLLGIAWFSGFKILQ 290 (477)
Q Consensus 275 ~~~~~~~~~~~~~~~~ 290 (477)
.+++.++..+......
T Consensus 409 ~~~~~~~~~~~~~~~~ 424 (434)
T PRK11663 409 ISIAAGISALLLLPFL 424 (434)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9888877666555443
No 147
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.48 E-value=1.7e-12 Score=127.33 Aligned_cols=167 Identities=13% Similarity=0.102 Sum_probs=126.7
Q ss_pred HHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHH-HHHHHHHHHHHHHHHh
Q 011781 121 LAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQ-TGVLIWSLATALLPLL 199 (477)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~-~~~~~~~~~~~~~~~~ 199 (477)
+..++..........+.|.+.+++|.+..+.+++.+...++..++.++.|+++||+|||+.+. .+.+..+++.+.+...
T Consensus 229 ~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~ 308 (402)
T TIGR00897 229 MVRIINTIGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYI 308 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHH
Confidence 334444455555666788888889999999999999999999999999999999999988764 3333333332222111
Q ss_pred ----hchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHHHH
Q 011781 200 ----AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIF 275 (477)
Q Consensus 200 ----~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~~ 275 (477)
.++.+..++..++.|++.+...+ ....+.+.. +++|++++|+.+....+|..++|.++|.+.+..||+..+++.
T Consensus 309 ~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~-~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~ 386 (402)
T TIGR00897 309 PQHFGHSFAVALIIAIALGIFLAGYVP-LAAVFPTLA-PKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIF 386 (402)
T ss_pred HHccCCcHHHHHHHHHHHHHHHHHHHH-HHHHHHhhC-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHH
Confidence 23445666778888888776544 445666654 478999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHh
Q 011781 276 GLLGIAWFSGFKIL 289 (477)
Q Consensus 276 ~~~~~~~~~~~~~~ 289 (477)
+++.++..+...++
T Consensus 387 a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 387 AALYVVSAFLTAFI 400 (402)
T ss_pred HHHHHHHHHHHHHh
Confidence 98887776666554
No 148
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.46 E-value=5.8e-13 Score=130.08 Aligned_cols=163 Identities=15% Similarity=0.135 Sum_probs=123.4
Q ss_pred HHHHHHHHHHhhhhHHHHhHHhhh-hhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHH-HH
Q 011781 118 TTSLAFVICNMDKVNLSVAIIPMS-HRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLAT-AL 195 (477)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~-~~ 195 (477)
......+...........+.|.+. +++|.+..+.+...+...++..++.++.|+++||+|||+.+..+..+..+.. .+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~ 302 (394)
T TIGR00883 223 LGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPL 302 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHH
Confidence 333444444455555666667655 7789999999999999999999999999999999999998775544433322 12
Q ss_pred HHHh--hchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHH-HhhhhhHHHHHHhhhHHhhcccC-hhHH
Q 011781 196 LPLL--AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFV-FGGLSFGSVAGLLLAPPIIENLG-WESV 271 (477)
Q Consensus 196 ~~~~--~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~~g~~ig~~~~~~l~~~~g-~~~~ 271 (477)
.... .++.+.+++..++.|++.+...+...+++.|.+|+++|++++++. +....+|..++|.++|.+.++.| |++.
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~ 382 (394)
T TIGR00883 303 LMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAI 382 (394)
T ss_pred HHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhH
Confidence 2112 234556667778888888888899999999999999999999984 55667899999999999999988 8887
Q ss_pred HHHHHHHHH
Q 011781 272 FYIFGLLGI 280 (477)
Q Consensus 272 ~~~~~~~~~ 280 (477)
++...++.+
T Consensus 383 ~~~~~~~~l 391 (394)
T TIGR00883 383 GYYLAALAL 391 (394)
T ss_pred HHHHHHHHH
Confidence 777665444
No 149
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.46 E-value=9.7e-11 Score=110.77 Aligned_cols=333 Identities=13% Similarity=0.067 Sum_probs=216.3
Q ss_pred HHhHHhhhhh-hCCCcchhh-HHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHH
Q 011781 134 SVAIIPMSHR-FGWNSSVAG-LVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRV 211 (477)
Q Consensus 134 ~~~~~~~~~~-~g~s~~~~g-~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (477)
....|++.+. .|++..++. -+.-+..=.+....++...+.|.++.|++++++.+...+...++ .+.++...+-+..+
T Consensus 24 Pfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~ll-l~~~sv~~mq~~q~ 102 (412)
T PF01770_consen 24 PFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLL-LFGTSVLAMQLMQF 102 (412)
T ss_pred ccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH-HHHCcHHHHHHHHH
Confidence 3345555554 788887764 34445555667778888999999999999999988776666665 57788899999999
Q ss_pred HHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhc--ccChhHHHHHHHHHHHHHHHHHHHh
Q 011781 212 LVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE--NLGWESVFYIFGLLGIAWFSGFKIL 289 (477)
Q Consensus 212 l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~--~~g~~~~~~~~~~~~~~~~~~~~~~ 289 (477)
+.|++.+. ..+..+++-...|+++-.++.+...++..+|..++.++|-.+.. ..+++...++......++++..+++
T Consensus 103 ~yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fL 181 (412)
T PF01770_consen 103 FYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFL 181 (412)
T ss_pred HHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHc
Confidence 99998654 67888888888899999999999999999999999999988775 3456666666666666667777777
Q ss_pred ccCCcCCCCCCCCc-------chhhhhhhhhhhhHHhhcc-CCC-----------CCCHHHHhhcHHHHHHHHHHHHhHH
Q 011781 290 QEGETSNGATLAPR-------SNYINMKKSLSASLEEMGE-SLK-----------DVPWKAIFRSKAVWAMIYAHFCGSW 350 (477)
Q Consensus 290 ~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~-~~~-----------~~~~~~~~~~~~~~~~~l~~~~~~~ 350 (477)
|.+++..--.+... .+.....+......+..++ ... ...+++..++|.++...+-..+..+
T Consensus 182 P~~~~S~~f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~atc 261 (412)
T PF01770_consen 182 PMPKRSLFFHRKPPAEQDANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFATC 261 (412)
T ss_pred CCCCcccceeccCccccccccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHh
Confidence 76554221111000 0000000000000000000 000 1224455678888888888888888
Q ss_pred HHHHHhhhhhHHHHHh--hCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhhhHHHHhhh
Q 011781 351 GHYTCLSWLPTYFSEE--LSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLS 428 (477)
Q Consensus 351 ~~~~~~~~~~~~~~~~--~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~~~~l~ 428 (477)
++....+|......+. -+-+...-|.+-++..+.+.++.+..|++..++.+. ....+....++.+.+++++
T Consensus 262 gy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~-------~~l~l~~~S~l~a~~L~lm 334 (412)
T PF01770_consen 262 GYYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRW-------GELALGVFSLLQAGLLFLM 334 (412)
T ss_pred HHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHH-------HHHHHHHHHHHHHHHHHHH
Confidence 8888888887777653 133444567888888888999999999986666543 1222222223323333333
Q ss_pred cccCCCchHHHHHHHHHHHHhhhhhhhhhhHhhhccCccchhhhhhhc
Q 011781 429 SIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLYLE 476 (477)
Q Consensus 429 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~g~~~gl~ 476 (477)
.. ..+.+...++.++++............-+...+..|.-|-++|++
T Consensus 335 ~~-t~~Iwv~Y~~yIif~~~y~fliTiA~~qIA~~l~~e~yaLVFGiN 381 (412)
T PF01770_consen 335 SF-TGNIWVCYAGYIIFRSLYMFLITIASFQIAKNLSEERYALVFGIN 381 (412)
T ss_pred HH-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccceeeeeeeH
Confidence 32 233344455556666666666666666677777778888888764
No 150
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.46 E-value=2.1e-12 Score=130.47 Aligned_cols=149 Identities=16% Similarity=0.148 Sum_probs=115.9
Q ss_pred HHHhHHhhh-hhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHh-hchHHHHHHHH
Q 011781 133 LSVAIIPMS-HRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLL-AGFMPGLVLSR 210 (477)
Q Consensus 133 ~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 210 (477)
....+|.+. +++|.+..+.+++.+...++..++.++.|+++||+|+|+++..+.++..+..++.... ..+.+.+.+..
T Consensus 294 ~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (496)
T PRK03893 294 IQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLL 373 (496)
T ss_pred HHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHH
Confidence 445667765 5899999999999999999999999999999999999999888776655554433222 23333344444
Q ss_pred HHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHHHHHHHHHH
Q 011781 211 VLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIA 281 (477)
Q Consensus 211 ~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~~~~~~~~ 281 (477)
++.++......+....++.+.+|+++|++++|+.+....+|..+||.++|.+.+.+||+..+.+.+....+
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~~~~ 444 (496)
T PRK03893 374 FFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFSLTF 444 (496)
T ss_pred HHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHHHHH
Confidence 55444444455677788999999999999999999999999999999999999999999888766554433
No 151
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.46 E-value=1.1e-11 Score=124.30 Aligned_cols=157 Identities=12% Similarity=0.100 Sum_probs=121.3
Q ss_pred hHHhhhhhhCCCcchhhHHHH-HHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHH---HHhhchHHHHHHHHH
Q 011781 136 AIIPMSHRFGWNSSVAGLVQS-SFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALL---PLLAGFMPGLVLSRV 211 (477)
Q Consensus 136 ~~~~~~~~~g~s~~~~g~~~~-~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 211 (477)
..|.+.+++|++..+++++.. ...++.+++.+++|+++||+|+|+.+.++.++.++..+++ ....++.+.+.+..+
T Consensus 245 ~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~ 324 (491)
T PRK11010 245 TTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVF 324 (491)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHH
Confidence 344556779999999999974 6668999999999999999999988776655544433322 111234344455566
Q ss_pred HHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHHHHHHHHHHHHHHHHHhcc
Q 011781 212 LVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQE 291 (477)
Q Consensus 212 l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 291 (477)
+..++.+...+...++..+..+++.+++.+++.+....+|..+++.+.|.+.+..||+..|.+.++++++..+....+++
T Consensus 325 l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~~ 404 (491)
T PRK11010 325 FENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCRQ 404 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHh
Confidence 65555566667778888899998899999999999999999999999999999999999999998888887777766654
Q ss_pred C
Q 011781 292 G 292 (477)
Q Consensus 292 ~ 292 (477)
+
T Consensus 405 ~ 405 (491)
T PRK11010 405 T 405 (491)
T ss_pred c
Confidence 3
No 152
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.46 E-value=4.3e-13 Score=133.35 Aligned_cols=163 Identities=18% Similarity=0.166 Sum_probs=127.6
Q ss_pred HHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhh--cChhHHHHH--HHHHHHHHHHH
Q 011781 121 LAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIF--GGRKVLQTG--VLIWSLATALL 196 (477)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~--g~r~~~~~~--~~~~~~~~~~~ 196 (477)
...++..........+++.+.+++|.+..+.+++.++..++.++++++.|++.||. ++|+...++ .++.+++.+++
T Consensus 248 ~~~~l~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~ 327 (455)
T TIGR00892 248 SGNVIMFLGFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLC 327 (455)
T ss_pred HHHHHHHHHccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444555566777778899999999999999999999999999999973 334333333 23333333333
Q ss_pred HHhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhccc-ChhHHHHHH
Q 011781 197 PLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL-GWESVFYIF 275 (477)
Q Consensus 197 ~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~-g~~~~~~~~ 275 (477)
...++++.+++.+++.|++.+...+...+++.+.+|++++++.+|+++....+|.++||.++|.+.+.. +|++.|++.
T Consensus 328 -~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~ 406 (455)
T TIGR00892 328 -ALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYAS 406 (455)
T ss_pred -HHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHh
Confidence 345666778889999999999999999999999999999999999999999999999999999999887 599999998
Q ss_pred HHHHHHHHH
Q 011781 276 GLLGIAWFS 284 (477)
Q Consensus 276 ~~~~~~~~~ 284 (477)
+++.++..+
T Consensus 407 ~~~~li~~~ 415 (455)
T TIGR00892 407 GSIVVSAGL 415 (455)
T ss_pred hHHHHHHHH
Confidence 877665443
No 153
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.44 E-value=2.8e-12 Score=128.66 Aligned_cols=177 Identities=16% Similarity=0.102 Sum_probs=133.2
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHH
Q 011781 113 YKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLA 192 (477)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 192 (477)
++.+...++..+...........+.|.+.+++|.+..+.++......++.+++.++.|+++||+|||+.+.++.++.+++
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 362 (481)
T TIGR00879 283 RRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAIC 362 (481)
T ss_pred HHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 34444455555555555556667788888899999988899999999999999999999999999999999887777666
Q ss_pred HHHHHHh----hc------hHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHh
Q 011781 193 TALLPLL----AG------FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPI 262 (477)
Q Consensus 193 ~~~~~~~----~~------~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l 262 (477)
.+++... .+ ....+....++.+.......+....++.|.+|+++|++++++.+...++|.+++|.+.+.+
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~ 442 (481)
T TIGR00879 363 LFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTM 442 (481)
T ss_pred HHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6555311 11 2222222333333332334466677789999999999999999999999999999999999
Q ss_pred hcccChhHHHHHHHHHHHHHHHHHHHh
Q 011781 263 IENLGWESVFYIFGLLGIAWFSGFKIL 289 (477)
Q Consensus 263 ~~~~g~~~~~~~~~~~~~~~~~~~~~~ 289 (477)
.++.+|++.|++.++++++..+..+++
T Consensus 443 ~~~~~~~~~f~~~~~~~~~~~i~~~~~ 469 (481)
T TIGR00879 443 LESIGVGGVFIFFGGLNVLGLIFVYFF 469 (481)
T ss_pred HHhcCccceehhHHHHHHHHHHHHhee
Confidence 999999999999888877766665543
No 154
>PRK09952 shikimate transporter; Provisional
Probab=99.43 E-value=5.8e-12 Score=124.79 Aligned_cols=165 Identities=15% Similarity=0.122 Sum_probs=118.1
Q ss_pred HhhhhHHHHhHHh-hhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHH-h-h-ch
Q 011781 127 NMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPL-L-A-GF 202 (477)
Q Consensus 127 ~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~-~-~-~~ 202 (477)
.........+.|. +.+++|.+......+..+..+...++.+++|+++||+|||+.+..+.++..++.+.+.. . . +.
T Consensus 263 ~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (438)
T PRK09952 263 LLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSI 342 (438)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCCh
Confidence 3333444445554 45678888876666666667777888899999999999999988776655444332211 1 1 23
Q ss_pred HHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhh-hhhHHHHHHhhhHHhhccc--ChhHHHHHHHHHH
Q 011781 203 MPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGG-LSFGSVAGLLLAPPIIENL--GWESVFYIFGLLG 279 (477)
Q Consensus 203 ~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~-~~~g~~ig~~~~~~l~~~~--g~~~~~~~~~~~~ 279 (477)
.+.+++..++.+++.+...+...+++.|.+|++.|+.+.++.... ..+|+.++|.+.+++.+.. +|+..+.+.+++.
T Consensus 343 ~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~ 422 (438)
T PRK09952 343 FWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGC 422 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHH
Confidence 344445566677887777888899999999999999899885544 5589999999999998754 4888888887777
Q ss_pred HHHHHHHHHhcc
Q 011781 280 IAWFSGFKILQE 291 (477)
Q Consensus 280 ~~~~~~~~~~~~ 291 (477)
++..+..+.+++
T Consensus 423 ~i~~v~~~~~~~ 434 (438)
T PRK09952 423 LISAMTALLMKD 434 (438)
T ss_pred HHHHHHHHHccc
Confidence 777666665544
No 155
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.43 E-value=1.4e-12 Score=128.07 Aligned_cols=142 Identities=11% Similarity=0.116 Sum_probs=115.0
Q ss_pred HHHhHHh-hhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHH
Q 011781 133 LSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRV 211 (477)
Q Consensus 133 ~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (477)
.....|. +.+++|.+..+.+++.+...++..++.++.|++.||+|+|+.+.++.++.++..+......++.+.+.+..+
T Consensus 257 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (405)
T TIGR00891 257 IQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLF 336 (405)
T ss_pred hhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHH
Confidence 3344444 556789999999999999999999999999999999999999888766553333322223445455666667
Q ss_pred HHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccC-hhHHHHH
Q 011781 212 LVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG-WESVFYI 274 (477)
Q Consensus 212 l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g-~~~~~~~ 274 (477)
+.|++.+...+....++.+.+|+++|++++|+.+....+|..++|+++|.+.++.| |+..+..
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 337 FQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred HHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHh
Confidence 77777777778888999999999999999999999999999999999999999988 8766655
No 156
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.43 E-value=1.7e-12 Score=131.03 Aligned_cols=166 Identities=13% Similarity=0.038 Sum_probs=110.9
Q ss_pred hhhHHHHhHHhhhhhhCCCcchhhH------------HHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHH
Q 011781 129 DKVNLSVAIIPMSHRFGWNSSVAGL------------VQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALL 196 (477)
Q Consensus 129 ~~~~~~~~~~~~~~~~g~s~~~~g~------------~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 196 (477)
.........|.+.++.|.+....+. ...+..++.+++.++.++++||+|||++++++.++.+++..+.
T Consensus 303 ~~y~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l 382 (502)
T TIGR00887 303 AFYGVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVL 382 (502)
T ss_pred HHHccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHH
Confidence 3333444577777888887543221 2234445666788899999999999999988877766665554
Q ss_pred HHhhc---hHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcc--------
Q 011781 197 PLLAG---FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN-------- 265 (477)
Q Consensus 197 ~~~~~---~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~-------- 265 (477)
+...+ ....+....+...++.....+....+.+|.+|.+.|+++.|+.+....+|.+++|.+.+.+.+.
T Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 462 (502)
T TIGR00887 383 GFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYP 462 (502)
T ss_pred HHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhcccccccccc
Confidence 33221 1111121112222222334456677789999999999999999999999999999999998873
Q ss_pred --cChhHHHHHHHHHHHHHHHHHHHhccCCc
Q 011781 266 --LGWESVFYIFGLLGIAWFSGFKILQEGET 294 (477)
Q Consensus 266 --~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (477)
.++...|++.+++.++..+..+++||++.
T Consensus 463 ~~~~~~~~~~i~~~~~~~~~i~~~~lpEt~~ 493 (502)
T TIGR00887 463 TGIWMGHVLEIFALFMFLGILFTLLIPETKG 493 (502)
T ss_pred ccccchHHHHHHHHHHHHHHHHheEeccCCC
Confidence 34566778887777766665555565443
No 157
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.43 E-value=8.9e-12 Score=121.33 Aligned_cols=155 Identities=17% Similarity=0.081 Sum_probs=125.1
Q ss_pred hhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhchHHHHH
Q 011781 128 MDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLV 207 (477)
Q Consensus 128 ~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (477)
.....+....|.+.++.|.+..++|.+.++..++..+..++.|++.||+|+|+.+..+.++.+++.++.. ..++.+.++
T Consensus 219 ~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~ 297 (382)
T PRK11128 219 GSHAAYYGFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMG-STTALPWLI 297 (382)
T ss_pred HHhHhHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH-hhhhHHHHH
Confidence 3344444555666677999999999999999999999999999999999999999998888887776664 566778888
Q ss_pred HHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHH-hhhhhHHHHHHhhhHHhhcccChhHHHHHHHHHHHHHHHH
Q 011781 208 LSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVF-GGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSG 285 (477)
Q Consensus 208 ~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~ig~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~ 285 (477)
+..++.|++.+...+....++.+. +++++++..+..+ ....+|..+||.++|.+.+.+|+ ..|+..+++.++.+++
T Consensus 298 ~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T PRK11128 298 VIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPALFI 374 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 899999999998889888888886 5567788899886 55678889999999999999987 4677666666554433
No 158
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.41 E-value=7.9e-12 Score=124.63 Aligned_cols=162 Identities=20% Similarity=0.138 Sum_probs=138.7
Q ss_pred HhhhhHHHHhHHhhh-hhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhchHHH
Q 011781 127 NMDKVNLSVAIIPMS-HRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPG 205 (477)
Q Consensus 127 ~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (477)
.+....+...+|.+. +++|.++..+|++.+.+.+|.+++.++.+++.+|+++++++..+.++++++.+.++ +.++.+.
T Consensus 231 ~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~la-l~~~~~~ 309 (524)
T PF05977_consen 231 NLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLA-LSPSFWL 309 (524)
T ss_pred HHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHh-cchHHHH
Confidence 333344445577755 56899999999999999999999999999999999999999888888888877774 6667788
Q ss_pred HHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHHHHHHHHHHHHHH
Q 011781 206 LVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSG 285 (477)
Q Consensus 206 ~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~ 285 (477)
.++..++.|++.........+.+....|++.|||+++++.+....+..+|.++.|.+.+.+|.+..+.+.++..++..++
T Consensus 310 ~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~ 389 (524)
T PF05977_consen 310 ALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALI 389 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence 88889999999999999999999999999999999999999999999999999999999999999998887766665555
Q ss_pred HHHh
Q 011781 286 FKIL 289 (477)
Q Consensus 286 ~~~~ 289 (477)
....
T Consensus 390 ~~~~ 393 (524)
T PF05977_consen 390 ALRF 393 (524)
T ss_pred HHHh
Confidence 4443
No 159
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.41 E-value=1.6e-11 Score=121.20 Aligned_cols=179 Identities=18% Similarity=0.147 Sum_probs=145.0
Q ss_pred HHHHHHHHHHHHHHhhhhHH-HHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcCh--hHHHHHHHHHH
Q 011781 114 KLIGTTSLAFVICNMDKVNL-SVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGR--KVLQTGVLIWS 190 (477)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r--~~~~~~~~~~~ 190 (477)
+.+...+++.++..-+.+.+ .....+..+++|++..+...+..+..+..++|++++|++.||+|.| +++.++.+++.
T Consensus 281 ~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~ 360 (477)
T PF11700_consen 281 RQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWI 360 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHH
Confidence 34444555555544444444 4445556668999999999999999999999999999999999999 88888777764
Q ss_pred HHHHHHHHh--------hchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHh
Q 011781 191 LATALLPLL--------AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPI 262 (477)
Q Consensus 191 ~~~~~~~~~--------~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l 262 (477)
+..+.. .+ .++.+.+++..++.|++.|..++..-++.+++.|+++.+..+|++....-....+||++.|.+
T Consensus 361 ~i~~~g-~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i 439 (477)
T PF11700_consen 361 IIPLYG-LFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLI 439 (477)
T ss_pred HHHHHH-HHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444333 23 445578999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccC-hhHHHHHHHHHHHHHHHHHHHhccCC
Q 011781 263 IENLG-WESVFYIFGLLGIAWFSGFKILQEGE 293 (477)
Q Consensus 263 ~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (477)
.+..| .|+.+....++.++.+++...++.++
T Consensus 440 ~~~tg~~r~g~~~l~~lf~~gl~ll~~v~~~~ 471 (477)
T PF11700_consen 440 TDATGSQRYGFLFLLVLFLIGLILLFFVDVEK 471 (477)
T ss_pred HHHhCCchhHHHHHHHHHHHHHHHHhhccchh
Confidence 99886 89999988888888777776665443
No 160
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.40 E-value=1.6e-11 Score=118.76 Aligned_cols=172 Identities=19% Similarity=0.245 Sum_probs=135.1
Q ss_pred HHHHHHHHHHhhhhHHHHhHHhhhhhhC-CCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHH
Q 011781 118 TTSLAFVICNMDKVNLSVAIIPMSHRFG-WNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALL 196 (477)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 196 (477)
...+..++.......+..+.+.+.++.| .+....+.+.++..++-++.-...+++..|+|.|+++.++.+.+++=..++
T Consensus 211 ~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~ 290 (400)
T PF03825_consen 211 VFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLY 290 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 3444445666667777777788788888 777888988899999999999999999999999999999999999988887
Q ss_pred HHhhchHHHHHHH----HHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhh-hhhHHHHHHhhhHHhhcccChhH-
Q 011781 197 PLLAGFMPGLVLS----RVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGG-LSFGSVAGLLLAPPIIENLGWES- 270 (477)
Q Consensus 197 ~~~~~~~~~~~~~----~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~-~~~g~~ig~~~~~~l~~~~g~~~- 270 (477)
+..+++.+..++. ..+.|+..+..+.+...++.+..|++.|+++.++++.. .++|.++|..++|++.+++|-+.
T Consensus 291 a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~ 370 (400)
T PF03825_consen 291 AYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGM 370 (400)
T ss_pred HHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhh
Confidence 6554543443333 45699999999999999999999999999999998875 57999999999999999877543
Q ss_pred -----HHHHHHHHHHHHHHHHHHh
Q 011781 271 -----VFYIFGLLGIAWFSGFKIL 289 (477)
Q Consensus 271 -----~~~~~~~~~~~~~~~~~~~ 289 (477)
.+.+.+++.++..+++.++
T Consensus 371 ~~~~~~~~v~a~~~~~~~~~f~~~ 394 (400)
T PF03825_consen 371 FDWSAVFLVFAVMALVILVLFVIL 394 (400)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhh
Confidence 4444454444444444433
No 161
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.39 E-value=3.9e-12 Score=123.33 Aligned_cols=191 Identities=17% Similarity=0.073 Sum_probs=142.2
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHH
Q 011781 105 PWKNIPQRYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQT 184 (477)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~ 184 (477)
.+++...|+.....+.+.......+......+...+.++.|++..++-+......+...+..+++..+.||+|||+.++.
T Consensus 261 ~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~ 340 (485)
T KOG0569|consen 261 LLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLI 340 (485)
T ss_pred HhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHH
Confidence 34444445555555555555666667777777888999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhh---chH--H---HHHHHHHHHHhhcc-chhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHH
Q 011781 185 GVLIWSLATALLPLLA---GFM--P---GLVLSRVLVGIGEG-VSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAG 255 (477)
Q Consensus 185 ~~~~~~~~~~~~~~~~---~~~--~---~~~~~~~l~g~~~~-~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig 255 (477)
+..+..+..+++.... +.. | ..+++.++..++.+ +..|..+-+.+|++|++.|+.++++......+..++-
T Consensus 341 ~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv 420 (485)
T KOG0569|consen 341 SLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIV 420 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHH
Confidence 9888777766553221 111 1 12344444444333 3468888999999999999999999999999999999
Q ss_pred HhhhHHhhcccChhHHHHHHHHHHHH-HHHHHHHhccCCcCC
Q 011781 256 LLLAPPIIENLGWESVFYIFGLLGIA-WFSGFKILQEGETSN 296 (477)
Q Consensus 256 ~~~~~~l~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 296 (477)
......+.+.+|- +.|++..+.+++ .+..+..+||++.+.
T Consensus 421 ~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPETkgr~ 461 (485)
T KOG0569|consen 421 GFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPETKGRT 461 (485)
T ss_pred HHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcccCCCC
Confidence 9888888888886 566666655554 455666677776544
No 162
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.38 E-value=3.8e-12 Score=122.98 Aligned_cols=133 Identities=23% Similarity=0.328 Sum_probs=115.3
Q ss_pred HhHHhhhhh-hCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHH
Q 011781 135 VAIIPMSHR-FGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLV 213 (477)
Q Consensus 135 ~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 213 (477)
...|.+.++ +|.+..+.+++.+...++..++.++.+++.||++||+.+..+..+.+++..+.....++.+.+++..++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (365)
T TIGR00900 232 ALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAI 311 (365)
T ss_pred HHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHH
Confidence 566776654 8999999999999999999999999999999999999998887776666666543322367778889999
Q ss_pred HhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccC
Q 011781 214 GIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG 267 (477)
Q Consensus 214 g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g 267 (477)
|++.+...+...+++.+..|+++|++++|+.+....+|..++|.++|.+.+.+|
T Consensus 312 g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 312 GVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 999999999999999999999999999999999999999999999999988654
No 163
>PRK10504 putative transporter; Provisional
Probab=99.38 E-value=2e-11 Score=122.50 Aligned_cols=150 Identities=19% Similarity=0.154 Sum_probs=119.5
Q ss_pred HHHHHHHHHhhhhHHHHhHHhhhh-hhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHH
Q 011781 119 TSLAFVICNMDKVNLSVAIIPMSH-RFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLP 197 (477)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~ 197 (477)
.....++............|.+.+ .+|.++.+.++......++..++.++.|++.||+|+|+++..+.++.++..+++.
T Consensus 266 ~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~ 345 (471)
T PRK10504 266 GLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFM 345 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHH
Confidence 344444444555556666777655 5899999999999999999989999999999999999999988887777665554
Q ss_pred Hhh--chHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccCh
Q 011781 198 LLA--GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGW 268 (477)
Q Consensus 198 ~~~--~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~ 268 (477)
... ++.+.+.+..++.|++.+...+....++.+..|+++++.++++.+....+|..+|+.++|.+.+..|+
T Consensus 346 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~g~ 418 (471)
T PRK10504 346 LVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLFGQ 418 (471)
T ss_pred hccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 332 23333455667788888888889999999999999999999999999999999999999999877665
No 164
>PRK15075 citrate-proton symporter; Provisional
Probab=99.36 E-value=1.9e-11 Score=121.04 Aligned_cols=149 Identities=15% Similarity=0.074 Sum_probs=105.6
Q ss_pred HHHHHHHhhhhHHHHhHHhhhh-hhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHH-HHHH
Q 011781 121 LAFVICNMDKVNLSVAIIPMSH-RFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATA-LLPL 198 (477)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~-~~~~ 198 (477)
...+...........+.|.+.+ .+|.+..+.++......++..++.+++|+++||+|||+.+..+.++..+... ....
T Consensus 245 ~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~ 324 (434)
T PRK15075 245 LMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSW 324 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Confidence 3333344445556666777655 4799999999998899999999999999999999999988776544332221 1111
Q ss_pred --hhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhh-hHHHHHHhhhHHhhcccChh
Q 011781 199 --LAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLS-FGSVAGLLLAPPIIENLGWE 269 (477)
Q Consensus 199 --~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~-~g~~ig~~~~~~l~~~~g~~ 269 (477)
..++...+.+..++.+++.+...+....++.|.+|++.|+.++++...... +++.++|.+.|++.++.|++
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 325 LVAAPSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred HHcCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCc
Confidence 122323333445556666666667777889999999999999998655444 56788999999999988864
No 165
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.36 E-value=1.9e-11 Score=119.83 Aligned_cols=152 Identities=14% Similarity=0.147 Sum_probs=107.1
Q ss_pred HHhhhhhhCCCcchhhHHHHHHH-HHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHH---HHhhchHHHHHHHHH-
Q 011781 137 IIPMSHRFGWNSSVAGLVQSSFF-WGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALL---PLLAGFMPGLVLSRV- 211 (477)
Q Consensus 137 ~~~~~~~~g~s~~~~g~~~~~~~-~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~- 211 (477)
.+.+.+++|+++.+++++.+... ++.+++.+++|++.||+|+|+.+..+..+..+..+.+ ....++.+.+++..+
T Consensus 233 ~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 312 (402)
T PRK11902 233 TTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGI 312 (402)
T ss_pred HHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHH
Confidence 44567779999999999986654 5688999999999999999998877666555443322 222244455554443
Q ss_pred ---HHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHHHHHHHHHHHHHHHHH
Q 011781 212 ---LVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKI 288 (477)
Q Consensus 212 ---l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 288 (477)
..|++.+...+....++.+.+|. +..++.+...++|.++++.++|.+.+.+||+..|.+.++++++..++...
T Consensus 313 ~~~~~g~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~~ 388 (402)
T PRK11902 313 ENLCGGMGTAAFVALLMALCNRSFSA----TQYALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLWL 388 (402)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcH----HHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH
Confidence 44455555566666666666654 34566666677888877889999999999999999998888777666555
Q ss_pred hccC
Q 011781 289 LQEG 292 (477)
Q Consensus 289 ~~~~ 292 (477)
.+.+
T Consensus 389 ~~~~ 392 (402)
T PRK11902 389 MRGT 392 (402)
T ss_pred Hhhh
Confidence 4433
No 166
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.35 E-value=3.8e-11 Score=117.88 Aligned_cols=325 Identities=17% Similarity=0.130 Sum_probs=192.8
Q ss_pred HHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhc-----ChhHHHHHHHHHHHHHHHHHHhhc---hHHH
Q 011781 134 SVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFG-----GRKVLQTGVLIWSLATALLPLLAG---FMPG 205 (477)
Q Consensus 134 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g-----~r~~~~~~~~~~~~~~~~~~~~~~---~~~~ 205 (477)
....+.+.+++|+++.+...+.++..+... ..++.|.++|-+. ||+-++++.++..++.+.++..+. +...
T Consensus 10 ~~~~~~l~~~l~ls~~~~~~~~~~~~lPw~-~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~ 88 (433)
T PF03092_consen 10 LAIYPFLKDDLGLSPAQLQRLSSLASLPWS-IKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAI 88 (433)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHhCchH-HhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhh
Confidence 445677889999999999988888887764 5678899999863 444455555554444444433333 4566
Q ss_pred HHHHHHHHHhhccchhhhHHHHhhhhc--CCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHHHHHHHHHHHH
Q 011781 206 LVLSRVLVGIGEGVSPSAATDLIARSI--PLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWF 283 (477)
Q Consensus 206 ~~~~~~l~g~~~~~~~~~~~~~i~~~~--~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~~~~~~~~~~ 283 (477)
..++.++..+|.+.......+++.|.. .++.+|...+.......+|.+++..++|.+.+..++++.|.+.+++.++..
T Consensus 89 ~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~ 168 (433)
T PF03092_consen 89 AVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLML 168 (433)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHH
Confidence 677788889999999999999999988 334478888999999999999999999999999999999999888877776
Q ss_pred HHHHHhccCCcCCCCCCCC-cchh-hhh-hhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHH-HHHHhHHHHHHHhhhh
Q 011781 284 SGFKILQEGETSNGATLAP-RSNY-INM-KKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIY-AHFCGSWGHYTCLSWL 359 (477)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~-~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~ 359 (477)
+..+++.+++......+.. ..+. ... ....++. ....++.++.|.+|...+ ..++............
T Consensus 169 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~ 239 (433)
T PF03092_consen 169 IVALFLLEERKVRPADEVFSFGKEEVPCLFGSFREQ---------LSELWRALQQRAIWQPILFFIFFFNLPPSISSASS 239 (433)
T ss_pred HHHHHhhhhccccccchhhcccccccchhhHHHHHH---------HHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccE
Confidence 6665555542211111000 0000 000 0000000 112457777888887666 3333322221111101
Q ss_pred hHHHHHhhC---CchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhhhHHHHhhhcc--c---
Q 011781 360 PTYFSEELS---LNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSI--D--- 431 (477)
Q Consensus 360 ~~~~~~~~g---~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~~~~l~~~--~--- 431 (477)
-.+..+..+ +++...+.+..+..++.++|..+..+...++. .|+......++.....+.-..+ .
T Consensus 240 fy~~~~~~~gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~--------~R~~~~~t~~~~~~~~l~~~~lv~~~n~ 311 (433)
T PF03092_consen 240 FYFQTDALGGPHFSPSFYGTLSIVGSIASLLGILLYRKYFSNWS--------WRRIFVVTTLVSVLASLFDLLLVTRWNL 311 (433)
T ss_pred EEEEeccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC--------HHHHHHHHHHHHHHHhcccEEEEEEEee
Confidence 111123345 88888888877777777777776665444432 2344444443333322221111 0
Q ss_pred ---CCCchHHHHHHHHHHHHhhhhhhhhhhHhhhccCccchhhhhhhc
Q 011781 432 ---LGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLYLE 476 (477)
Q Consensus 432 ---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~g~~~gl~ 476 (477)
.+..+..+.--++..........|......+..|+...|+.+|+.
T Consensus 312 ~~Gi~d~~f~lgd~~l~~~~~~i~~mP~lvl~a~lcP~G~Egt~yall 359 (433)
T PF03092_consen 312 DLGIPDQWFALGDTILEEVIGMIAFMPSLVLAARLCPKGSEGTVYALL 359 (433)
T ss_pred eeCcCCeEEEEEhHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHH
Confidence 111111222223333343334445555555556666689988864
No 167
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.35 E-value=2.1e-11 Score=119.05 Aligned_cols=156 Identities=15% Similarity=0.037 Sum_probs=116.4
Q ss_pred hhHHHHhHHhhhhhhCCCcchhhHHHHHHHH-HHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHh-----hchH
Q 011781 130 KVNLSVAIIPMSHRFGWNSSVAGLVQSSFFW-GYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLL-----AGFM 203 (477)
Q Consensus 130 ~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~-~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-----~~~~ 203 (477)
........+.+.+|.|++++++|++.....+ ...++.++.|++.||+|+|+.+..+.++.++..+..... ..+.
T Consensus 224 ~~~~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (390)
T TIGR02718 224 AVSGFGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGI 303 (390)
T ss_pred HHHHHHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcH
Confidence 3333345566667789999999999888764 666778999999999999999888766553333222111 1222
Q ss_pred HHHHHHHHHHHhhccchhhhHHHHhhhhcCC-cchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHHHHHHHHHHH
Q 011781 204 PGLVLSRVLVGIGEGVSPSAATDLIARSIPL-EERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAW 282 (477)
Q Consensus 204 ~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~~~~~~~~~ 282 (477)
..++....+.+++.+...+...+.+.+..++ +++++.+++.+...++|..+||.++|.+.+..|++..|++.+++.++.
T Consensus 304 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a 383 (390)
T TIGR02718 304 AVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLA 383 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHH
Confidence 3334444556666777778888887787765 789999999999999999999999999999999999999887776665
Q ss_pred HHH
Q 011781 283 FSG 285 (477)
Q Consensus 283 ~~~ 285 (477)
.+.
T Consensus 384 ~~~ 386 (390)
T TIGR02718 384 ILL 386 (390)
T ss_pred HHH
Confidence 443
No 168
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.34 E-value=6.6e-11 Score=117.10 Aligned_cols=145 Identities=13% Similarity=0.058 Sum_probs=107.9
Q ss_pred HHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhch-HHHHHHHHH
Q 011781 133 LSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGF-MPGLVLSRV 211 (477)
Q Consensus 133 ~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 211 (477)
+...+|.+.++.|.++.+.+.+.++..++..++.++.|++.||+|||+.+..+.++..+..+........ ...+.+..+
T Consensus 250 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (426)
T PRK12307 250 IFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLF 329 (426)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHH
Confidence 4456777777789999999999999999999999999999999999999888876665554443222222 122222222
Q ss_pred HHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHHHHHH
Q 011781 212 LVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGL 277 (477)
Q Consensus 212 l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~~~~ 277 (477)
..+++.....+....++.|.+|+++|++++|+......+|..++|.+.|++.+..|+....++..+
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~~~~~~~~~~ 395 (426)
T PRK12307 330 GLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAALTFIVA 395 (426)
T ss_pred HHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 222333334456667889999999999999999999999999999999999999887655444433
No 169
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.34 E-value=2.2e-11 Score=119.16 Aligned_cols=142 Identities=12% Similarity=0.054 Sum_probs=116.9
Q ss_pred CCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhhccchhhhH
Q 011781 145 GWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAA 224 (477)
Q Consensus 145 g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~ 224 (477)
+.+....|++.++..+...++.++.|++.||+|+|+.+.++.++.++...+.. ..++.+.+++..++.|++........
T Consensus 250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~-~~~~~~~~~~~~~l~g~~~~~~~~~~ 328 (396)
T TIGR00882 250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSS-FATTALEVVILKMLHAFEVPFLLVGC 328 (396)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHH-hcCChHHHHHHHHHHHHHHHHHHHHH
Confidence 55666789999999999999999999999999999999998888877766654 45666777888999998876666666
Q ss_pred HHHhhhhcCCcchhhHHHH-HHhhhhhHHHHHHhhhHHhhcccChhHHHHHHHHHHHHHHHHHH
Q 011781 225 TDLIARSIPLEERSRAVSF-VFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFK 287 (477)
Q Consensus 225 ~~~i~~~~~~~~r~~~~~~-~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 287 (477)
..+..+..+++.++...+. .+....+|.++++.++|++.+..||+..|.+.+++.++..+...
T Consensus 329 ~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~~ 392 (396)
T TIGR00882 329 FKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLISV 392 (396)
T ss_pred HHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 6677777787777777666 67889999999999999999999999999999888877655443
No 170
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.34 E-value=8.6e-11 Score=114.73 Aligned_cols=146 Identities=16% Similarity=0.137 Sum_probs=115.7
Q ss_pred hHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHh
Q 011781 136 AIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGI 215 (477)
Q Consensus 136 ~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 215 (477)
..|.+.+++|++..+.+++.....++..++.++.+++.||.+ |+.+..+..+..+..+++....++.+.+.+..++.|+
T Consensus 239 ~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~-~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~ 317 (394)
T PRK10213 239 IRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSV-KLALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWGL 317 (394)
T ss_pred HHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccc-hhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 347777888999999999999999999999999999999964 4444444344333333332345556777788899999
Q ss_pred hccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHHHHHHHHHHHH
Q 011781 216 GEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWF 283 (477)
Q Consensus 216 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~~~~~~~~~~ 283 (477)
+.+...+...+++.+..| +++++..+......++|..+||.++|.+.+..|++..++..+++.++..
T Consensus 318 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~~~ 384 (394)
T PRK10213 318 TFALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLTA 384 (394)
T ss_pred HHHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHHHH
Confidence 999999999989998887 6677888888889999999999999999999999988888776655443
No 171
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.34 E-value=8e-11 Score=110.62 Aligned_cols=159 Identities=11% Similarity=0.071 Sum_probs=120.9
Q ss_pred HHHHHHHHHHHHhhhhHHHHhHHhhhh---hhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHH
Q 011781 116 IGTTSLAFVICNMDKVNLSVAIIPMSH---RFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLA 192 (477)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 192 (477)
+....+..++..........+.+.+.+ .+|+++.+.++..+.+..+..++.++.+++.||+|+|+.+.++..+..++
T Consensus 142 ~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~ 221 (310)
T TIGR01272 142 LVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLL 221 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 334445555555455555666666553 36999999999999999999999999999999999999988887776666
Q ss_pred HHHHHHhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHH
Q 011781 193 TALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVF 272 (477)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~ 272 (477)
.++.. ..+. .......++.|++.+..+|...+...+..+ ++.+++.++. ....+|++++|.+.|.+.|..|.+..|
T Consensus 222 ~~l~~-~~~~-~~~~~~~~l~g~~~s~i~P~~~s~a~~~~~-~~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~ 297 (310)
T TIGR01272 222 SIGAA-LTHG-YVAMWFVLALGLFNSIMFPTIFSLALNALG-RHTSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAF 297 (310)
T ss_pred HHHHH-HcCC-HHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-hhhhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHH
Confidence 54443 3333 223346668899999999999999999887 4456777775 567799999999999999999999888
Q ss_pred HHHHHH
Q 011781 273 YIFGLL 278 (477)
Q Consensus 273 ~~~~~~ 278 (477)
++..++
T Consensus 298 ~v~~~~ 303 (310)
T TIGR01272 298 ALPVPC 303 (310)
T ss_pred HHHHHH
Confidence 854443
No 172
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.34 E-value=5.2e-11 Score=115.96 Aligned_cols=151 Identities=17% Similarity=0.117 Sum_probs=110.4
Q ss_pred HHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhh
Q 011781 137 IIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIG 216 (477)
Q Consensus 137 ~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 216 (477)
.|.+.+.+|.++.+.+++.+...++..++.++.|++.||+|+|+.+..+..+.+++.++.....++.+..++..++.+++
T Consensus 223 ~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g 302 (382)
T PRK10091 223 KPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAFICCAG 302 (382)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 45566678999999999999999999999999999999999999998888777777655543444445555666666666
Q ss_pred ccchhhhHHHH-hhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcc-cChhHHHHHHHHHHHHHHHHHHHh
Q 011781 217 EGVSPSAATDL-IARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN-LGWESVFYIFGLLGIAWFSGFKIL 289 (477)
Q Consensus 217 ~~~~~~~~~~~-i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~ 289 (477)
.....+..... ..+..+++.++.+ ..+....+|.++||.++|++.+. .+|++.+.+.+++.++........
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (382)
T PRK10091 303 LFALSAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLY 375 (382)
T ss_pred HHhhhHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHHHH
Confidence 54444444433 3343344444443 34677889999999999999985 689999999887776654444433
No 173
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.34 E-value=1.6e-11 Score=119.26 Aligned_cols=155 Identities=15% Similarity=0.108 Sum_probs=109.5
Q ss_pred HHHHHHHHHHhhhhHHHHhHHh-hhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcC-hhHHH-HHH-HHHHHHH
Q 011781 118 TTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGG-RKVLQ-TGV-LIWSLAT 193 (477)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~-r~~~~-~~~-~~~~~~~ 193 (477)
.+.+..+...........+.|. +.+++|.+..+.++..+...++..++.++.|++.||..+ |+... ... ....++.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~ 299 (379)
T TIGR00881 220 YISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSL 299 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHH
Confidence 3334444444444555555665 456689999999999999999999999999999998643 33222 211 1111121
Q ss_pred HHHHHh-hchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHH
Q 011781 194 ALLPLL-AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVF 272 (477)
Q Consensus 194 ~~~~~~-~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~ 272 (477)
...... ..+....++..++.|+......+....++.+.+|+++|+++.|+.+....+|..++|.+.|.+.++.||++.|
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 300 LVYWLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFGWAGAF 379 (379)
T ss_pred HHHhcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhcccccC
Confidence 121111 2233455566677777666666667788999999999999999999999999999999999999999998754
No 174
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.34 E-value=8.8e-12 Score=123.77 Aligned_cols=148 Identities=16% Similarity=0.193 Sum_probs=113.5
Q ss_pred HHHHHHHHhhhhHHHHhHHhhhhh-hCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHH
Q 011781 120 SLAFVICNMDKVNLSVAIIPMSHR-FGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPL 198 (477)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 198 (477)
++..++............+.+.++ ++ +..+.+++.++..++.+++.+++++++||+|+|+.+..+.++..++.++...
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~ 306 (437)
T TIGR00792 228 CLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFF 306 (437)
T ss_pred HHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH
Confidence 333334444444444444444333 34 5667788888889999999999999999999999999998887777666543
Q ss_pred hhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcC-------CcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccCh
Q 011781 199 LAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIP-------LEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGW 268 (477)
Q Consensus 199 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~-------~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~ 268 (477)
..++.+.+++..++.|++.+...+...++++|..+ ++++|.++|+.+....+|..+++.+.|.+.+..||
T Consensus 307 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~ 383 (437)
T TIGR00792 307 AGSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGY 383 (437)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 33455666777888999999889999999998865 45679999999999999999999999999887766
No 175
>TIGR00895 2A0115 benzoate transport.
Probab=99.33 E-value=7.7e-12 Score=122.33 Aligned_cols=141 Identities=21% Similarity=0.205 Sum_probs=113.4
Q ss_pred HHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhh
Q 011781 121 LAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLA 200 (477)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~ 200 (477)
+..++..........+.|.+.+++|.+..+.++..++..++..++.++.|++.||+|+|+.+... .+.++...++....
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 335 (398)
T TIGR00895 257 LLYFMLLVGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLL-LLGAVFAVLVGSTL 335 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHH-HHHHHHHHHHHHHh
Confidence 33334444555566677888889999999999999999999999999999999999999554443 33333333332224
Q ss_pred chHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHh
Q 011781 201 GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPI 262 (477)
Q Consensus 201 ~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l 262 (477)
++.+..++..++.|++.+...+...+++.+.+|+++|++++|+......+|..+||.++|.+
T Consensus 336 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 336 FSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 45566778889999999999999999999999999999999999999999999999999876
No 176
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.33 E-value=4.8e-11 Score=119.99 Aligned_cols=163 Identities=11% Similarity=-0.011 Sum_probs=121.1
Q ss_pred HhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhh--chH-
Q 011781 127 NMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLA--GFM- 203 (477)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~--~~~- 203 (477)
..+......+.|.+.++.|.+....++......+..+++.++.++++||+|||++++.+.++.+++.+++.... +..
T Consensus 284 ~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~ 363 (479)
T PRK10077 284 FVGINVVLYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPG 363 (479)
T ss_pred HhChhHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCccc
Confidence 33444555667888888999888777787788888999999999999999999999999888888776654321 111
Q ss_pred HHHHHHHHHHHhhccc-hhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHh------hcccChhHHHHHHH
Q 011781 204 PGLVLSRVLVGIGEGV-SPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPI------IENLGWESVFYIFG 276 (477)
Q Consensus 204 ~~~~~~~~l~g~~~~~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l------~~~~g~~~~~~~~~ 276 (477)
.....+.++.+++.+. ..+....+++|.+|+++|++++|+......+|.++++.+.+.+ .+..+|++.|++.+
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 443 (479)
T PRK10077 364 IVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYG 443 (479)
T ss_pred HHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHH
Confidence 1223334444444433 3467789999999999999999999999999999887666544 35788999999988
Q ss_pred HHHHHHHHHHHHh
Q 011781 277 LLGIAWFSGFKIL 289 (477)
Q Consensus 277 ~~~~~~~~~~~~~ 289 (477)
+++++.++..+++
T Consensus 444 ~~~~~~~~~~~~~ 456 (479)
T PRK10077 444 CMGVLAALFMWKF 456 (479)
T ss_pred HHHHHHHHHHHhc
Confidence 7776665555443
No 177
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=99.33 E-value=4.4e-09 Score=101.46 Aligned_cols=351 Identities=13% Similarity=0.011 Sum_probs=196.8
Q ss_pred HHHHHHHHHHHHHhhhhHHHHhHHhhhhhhC-CCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHH-
Q 011781 115 LIGTTSLAFVICNMDKVNLSVAIIPMSHRFG-WNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLA- 192 (477)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~- 192 (477)
....+....++...+.-++....+.+..+.. -+---.+...-.-.+..+++++..|.+.||..|.++...+.+..-++
T Consensus 3 ~~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv 82 (432)
T PF06963_consen 3 ALWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSV 82 (432)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHH
Confidence 3446677888888899999999888776663 24334455555566677788899999999999998876664432221
Q ss_pred ---HHHHHH-hh--c-----h--HHHHHHHHHHHHhhccchhhhH-HHHhhhh----c--CCcchhhHHHHHHhhhhhHH
Q 011781 193 ---TALLPL-LA--G-----F--MPGLVLSRVLVGIGEGVSPSAA-TDLIARS----I--PLEERSRAVSFVFGGLSFGS 252 (477)
Q Consensus 193 ---~~~~~~-~~--~-----~--~~~~~~~~~l~g~~~~~~~~~~-~~~i~~~----~--~~~~r~~~~~~~~~~~~~g~ 252 (477)
+.++.. +. . . ...+++...+.|.-.-....+. .+.=-|| . +++.+.+.++...-.-.+.-
T Consensus 83 ~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ck 162 (432)
T PF06963_consen 83 AASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCK 162 (432)
T ss_pred HHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHH
Confidence 111111 11 1 1 1112222222222211111111 1111122 2 45667788888888888999
Q ss_pred HHHHhhhHHhhcccChhHHHHHHHHHHHHHHHHHHHhc----cCCc----CCCCCCCCcchhhh---hhhhhhhhHHhhc
Q 011781 253 VAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQ----EGET----SNGATLAPRSNYIN---MKKSLSASLEEMG 321 (477)
Q Consensus 253 ~ig~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~----~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 321 (477)
+++|++.|.+.+..+.+...++.++..++...+=+++. +..+ ++..+..+..+... ..+......+..+
T Consensus 163 llaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (432)
T PF06963_consen 163 LLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFLLARVYNSVPALAVKKRSSESESSSDEESSSESSSDPSILKRLW 242 (432)
T ss_pred HHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHhcCCCCCccccccccccccccccchhhHHHHHH
Confidence 99999999999988999888888877777655433321 1111 11100000000000 0000000000100
Q ss_pred c--CCCCCCHHHHhhcHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHH
Q 011781 322 E--SLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNL 399 (477)
Q Consensus 322 ~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~ 399 (477)
+ ......|+..+++|.+...+...+++. ...++......|+..+ |+++...|..-+...+.++.+.++.+++.+|+
T Consensus 243 ~~~~~~~~~w~~Y~~q~vflas~alalLY~-TVLsf~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~ri 320 (432)
T PF06963_consen 243 NPLRTIIRGWRTYFRQPVFLASFALALLYF-TVLSFGGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRI 320 (432)
T ss_pred HHHHHHhccHHHHHhCHHHHHHHHHHHHHH-HHhcCcHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1 111345777788886665544444443 3555677888999875 99999999999999999999999999999999
Q ss_pred HhcCcccceehhhhhHHh--hhhhHHHHhhhcccCCCc-hHHHHHHHHHHH-----HhhhhhhhhhhHhhhccCccchhh
Q 011781 400 IATGVETTMVRKICQTIA--FLSPAVCMTLSSIDLGLP-HWEIVGILTAGL-----ALSSFALSGLYCTHQDISPEYASI 471 (477)
Q Consensus 400 g~~~~~~~~~r~~~~~~~--~~~~~~~~~l~~~~~~~~-~~~~~~~~~~g~-----~~~~~~~~~~~~~~~~~~p~~~g~ 471 (477)
|.. |.-...+. ..+...+....... ..+ .......++.|. +..++-......+++.+++++||+
T Consensus 321 Glv-------r~G~~~l~~q~~~L~~~v~~~~~~-~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~ 392 (432)
T PF06963_consen 321 GLV-------RAGLWSLWWQWVCLALCVVSFWAP-GSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGA 392 (432)
T ss_pred cch-------hhHHHHHHHHHHHHHHHHHHHhcC-CCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhH
Confidence 865 22111111 11112222222222 211 122222333333 333444444445555677888999
Q ss_pred hhhh
Q 011781 472 LLYL 475 (477)
Q Consensus 472 ~~gl 475 (477)
+.|+
T Consensus 393 v~gv 396 (432)
T PF06963_consen 393 VSGV 396 (432)
T ss_pred HHHH
Confidence 9885
No 178
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.32 E-value=3.3e-11 Score=112.26 Aligned_cols=176 Identities=22% Similarity=0.200 Sum_probs=140.4
Q ss_pred HHHHHHHHHHHHhhhhHHHHhHHh-hhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHH
Q 011781 116 IGTTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATA 194 (477)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 194 (477)
...+++.++..+.+...++..+|. +.+++|.++.+.|.....+.+...+..+.+|+++||+|.+|++......++++..
T Consensus 220 ~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~ 299 (417)
T COG2223 220 TWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAA 299 (417)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHH
Confidence 345566666777777777777777 6788999999999999999999999999999999999999999988888888777
Q ss_pred HHHHhh------chHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccC-
Q 011781 195 LLPLLA------GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG- 267 (477)
Q Consensus 195 ~~~~~~------~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g- 267 (477)
+..... .+....++..+..+++.+.-......++..+++ ++-|.+.|+.....++|+..-|...+...+..|
T Consensus 300 ~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~-~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~ 378 (417)
T COG2223 300 LLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFP-KETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGS 378 (417)
T ss_pred HHHccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHH-hhhhHHHHHHHHhccccccchhHHHHHHHHhccc
Confidence 765443 333444444455555555555666788888887 588999999999999999999999999998887
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhccC
Q 011781 268 WESVFYIFGLLGIAWFSGFKILQEG 292 (477)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (477)
+...|++...+.+++.+.......+
T Consensus 379 ~~~~f~~~~~~~~~a~v~~~~~y~r 403 (417)
T COG2223 379 YTGAFMLLLAFYLVALVLTWALYAR 403 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999988888877766555443
No 179
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.32 E-value=1.8e-11 Score=122.40 Aligned_cols=158 Identities=17% Similarity=0.134 Sum_probs=108.6
Q ss_pred HHHhHHh-hhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChh-------HHHHHHHHHHHHHHHHHHhhchHH
Q 011781 133 LSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRK-------VLQTGVLIWSLATALLPLLAGFMP 204 (477)
Q Consensus 133 ~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~-------~~~~~~~~~~~~~~~~~~~~~~~~ 204 (477)
+....|. +.+++|++..+.+.+.++..++..++.+++|+++||++||+ ...+..++.++..+++. ..++.+
T Consensus 271 ~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~-~~~~~~ 349 (476)
T PLN00028 271 MDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLG-RANSLG 349 (476)
T ss_pred HHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhc-ccchHH
Confidence 3344554 45678999999999999999999999999999999998652 22233333333333332 334444
Q ss_pred HHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHHHHHHHHHHHHH
Q 011781 205 GLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFS 284 (477)
Q Consensus 205 ~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~~~~~~~~~~~ 284 (477)
..++..++.+++.+...+...+++.+..| +++|.+.|+.+.+..+|++++|.+.+ ..+..+|+..|++.+++.++..+
T Consensus 350 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~ 427 (476)
T PLN00028 350 AAIVVMILFSIFVQAACGATFGIVPFVSR-RSLGVISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTL 427 (476)
T ss_pred HHHHHHHHHHHHHHHhhhhhcccCcccCh-hhchhhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHH
Confidence 45555566666655555556666666554 78999999998888888888877654 22344699999999988888777
Q ss_pred HHHHhccCC
Q 011781 285 GFKILQEGE 293 (477)
Q Consensus 285 ~~~~~~~~~ 293 (477)
+.++.+.+.
T Consensus 428 ~~~~~~~~~ 436 (476)
T PLN00028 428 PVAFIHFPQ 436 (476)
T ss_pred HHHheeccc
Confidence 777665443
No 180
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.32 E-value=6e-11 Score=116.56 Aligned_cols=154 Identities=14% Similarity=-0.009 Sum_probs=117.0
Q ss_pred HHHHhHHh-hhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHh----hchHHHH
Q 011781 132 NLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLL----AGFMPGL 206 (477)
Q Consensus 132 ~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 206 (477)
.+....|. +.+++|.++.+.++......++..++.++.|++.||+++|+.+.++.++..++.++.... .++.+.+
T Consensus 233 ~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 312 (406)
T PRK15402 233 AWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWL 312 (406)
T ss_pred HHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHH
Confidence 33344555 456789999999998888888899999999999999999999988877766666555332 2344556
Q ss_pred HHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHHHHHHHHHHHHHHH
Q 011781 207 VLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGF 286 (477)
Q Consensus 207 ~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~ 286 (477)
++..++.|++.+...+......... +++++|++.+..+....+|..+|+.+++.+.+..++....+..++..++..+..
T Consensus 313 ~~~~~~~g~g~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 391 (406)
T PRK15402 313 TAGLSLYAFGIGLANAGLYRLTLFS-SDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANGLLWLLLV 391 (406)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHhhh-ccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHHH
Confidence 7788889998887777666655444 448999999999999999999999999999888887766555555554443333
No 181
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.31 E-value=4e-11 Score=118.96 Aligned_cols=162 Identities=13% Similarity=0.026 Sum_probs=108.0
Q ss_pred hhhhHHHHhHHhhhh-hhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHH---HHHHHHHHh-hch
Q 011781 128 MDKVNLSVAIIPMSH-RFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWS---LATALLPLL-AGF 202 (477)
Q Consensus 128 ~~~~~~~~~~~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~---~~~~~~~~~-~~~ 202 (477)
........+.|.+.+ ..|.++.+.++...+..++.+++.++.|+++||+++++....+..+.. ++.+.+... ..+
T Consensus 265 ~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (438)
T TIGR00712 265 LLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGN 344 (438)
T ss_pred HHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 333444556666554 479999999999999999999999999999999965432222322211 111111111 122
Q ss_pred HHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhH-HHHHHhhhHHhhcccChhHHHHHHHHHHHH
Q 011781 203 MPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFG-SVAGLLLAPPIIENLGWESVFYIFGLLGIA 281 (477)
Q Consensus 203 ~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g-~~ig~~~~~~l~~~~g~~~~~~~~~~~~~~ 281 (477)
.+...+..++.|++.............+.+|+++|++++|+.+....+| .+++|.+.|.+.++.||.+.|++..++.++
T Consensus 345 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~ 424 (438)
T TIGR00712 345 PLVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSIL 424 (438)
T ss_pred hHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHH
Confidence 2333344455555433333333456778899999999999999888876 578999999999999999999887776666
Q ss_pred HHHHHHHh
Q 011781 282 WFSGFKIL 289 (477)
Q Consensus 282 ~~~~~~~~ 289 (477)
..+..+++
T Consensus 425 ~~~~~~~~ 432 (438)
T TIGR00712 425 AVILLIVV 432 (438)
T ss_pred HHHHHHHH
Confidence 55444433
No 182
>TIGR00898 2A0119 cation transport protein.
Probab=99.31 E-value=1.5e-11 Score=124.54 Aligned_cols=152 Identities=17% Similarity=-0.026 Sum_probs=115.2
Q ss_pred HhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhch-HHHHHHHHHHHHhh
Q 011781 138 IPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGF-MPGLVLSRVLVGIG 216 (477)
Q Consensus 138 ~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~g~~ 216 (477)
+.....++.+. .+...+..+..+++.++.+++.||+|||+.+.++.++.+++.+++....+. .+..++..++.+++
T Consensus 347 ~~~~~~~~~~~---~~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 423 (505)
T TIGR00898 347 VLDLGNLGGNI---YLDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFG 423 (505)
T ss_pred hccccccCCCh---HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHH
Confidence 33444455443 233445566777888999999999999999999988877777666443332 23445556667777
Q ss_pred ccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHHHHHHHHHHHHHHHHHhccCCc
Q 011781 217 EGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGET 294 (477)
Q Consensus 217 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (477)
.+..++....+..|.+|++.|+.++|+.+....+|.+++|.+.+ + ...++..++++.+++.++..+..++++|++.
T Consensus 424 ~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~lpet~~ 499 (505)
T TIGR00898 424 ITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-L-GEKWLFLPLVLFGGLALLAGILTLFLPETKG 499 (505)
T ss_pred HHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-H-HHHHHhhHHHHHHHHHHHHHHHHHcCcCCCC
Confidence 77778888999999999999999999999999999999999998 3 4456778888888888887777777776543
No 183
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.30 E-value=1.4e-10 Score=114.83 Aligned_cols=162 Identities=15% Similarity=0.078 Sum_probs=104.3
Q ss_pred HhhhhHHHHhHHhh-hhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHH-h--hch
Q 011781 127 NMDKVNLSVAIIPM-SHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPL-L--AGF 202 (477)
Q Consensus 127 ~~~~~~~~~~~~~~-~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~-~--~~~ 202 (477)
......+..++|.+ .+++|.+..+.+...++..+...+++++.|+++||+|||+.+.++.++.++....... . .++
T Consensus 256 ~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (432)
T PRK10406 256 SLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSS 335 (432)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 33444455566664 4668999989999999888888899999999999999999887765543333221111 1 122
Q ss_pred HHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhh-HHHHHHhhhHHhhcccC-hhHHHHHHHHHHH
Q 011781 203 MPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSF-GSVAGLLLAPPIIENLG-WESVFYIFGLLGI 280 (477)
Q Consensus 203 ~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~ig~~~~~~l~~~~g-~~~~~~~~~~~~~ 280 (477)
....+....+.+++.+...+....+++|++|++.|+.++|+.+...++ ++...|.+.+.+ +..| |...+++.++..+
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l-~~~g~~~~~~~~~~~~~~ 414 (432)
T PRK10406 336 PYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSL-KSIGMETAFFWYVTLMAV 414 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHH-HHhCCCcHHHHHHHHHHH
Confidence 222222222222333334455677889999999999999998876554 344578877755 4445 5556666666666
Q ss_pred HHHHHHHHh
Q 011781 281 AWFSGFKIL 289 (477)
Q Consensus 281 ~~~~~~~~~ 289 (477)
+.++..+++
T Consensus 415 i~~~~~~~l 423 (432)
T PRK10406 415 VAFLVSLML 423 (432)
T ss_pred HHHHHHHHh
Confidence 655555544
No 184
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.28 E-value=8.6e-11 Score=116.67 Aligned_cols=176 Identities=21% Similarity=0.213 Sum_probs=152.8
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhc--ChhHHHHHHHHHHH
Q 011781 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFG--GRKVLQTGVLIWSL 191 (477)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g--~r~~~~~~~~~~~~ 191 (477)
+.++.+.+...+..++..+...++|.+.++.|.+..+.+.+.++..+..+++.++.|+++|+.. ++.+..++.++.++
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl 377 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGL 377 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHH
Confidence 4555666677777788888888899999999999999999999999999999999999999987 44555666666666
Q ss_pred HHHHHHHhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccC-hhH
Q 011781 192 ATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG-WES 270 (477)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g-~~~ 270 (477)
+.+.++ ..++++.++....+.|++.|.........+.|+.+.++...+.|+...+.+++.++||+++|.+.+..| |..
T Consensus 378 ~~~~~p-~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~ 456 (509)
T KOG2504|consen 378 ARLFLP-FATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDH 456 (509)
T ss_pred HHHHHH-HhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeee
Confidence 665554 667778999999999999999988888899999999999999999999999999999999999999887 999
Q ss_pred HHHHHHHHHHHHHHHHHHhc
Q 011781 271 VFYIFGLLGIAWFSGFKILQ 290 (477)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~ 290 (477)
.|+..++..++....++..+
T Consensus 457 ~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 457 AFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred ehhhcChHHHHHHHHHHHhH
Confidence 99999999888887777666
No 185
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.27 E-value=4.1e-11 Score=111.64 Aligned_cols=176 Identities=18% Similarity=0.129 Sum_probs=139.1
Q ss_pred HHHHHHHHHHHHhhh-hHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHH
Q 011781 116 IGTTSLAFVICNMDK-VNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATA 194 (477)
Q Consensus 116 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 194 (477)
+....+..++..-+. ..+......-..++|++..++.++.....+..++|++++|++.||+|.|+++.++.+++.+.++
T Consensus 254 i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~ 333 (438)
T COG2270 254 LVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAAL 333 (438)
T ss_pred hHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHH
Confidence 334444444443333 3333334444559999999999999999999999999999999999999999999888877776
Q ss_pred HHHHhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccC-hhHHHH
Q 011781 195 LLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG-WESVFY 273 (477)
Q Consensus 195 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g-~~~~~~ 273 (477)
... +...-..+.++..+.|++.|..+...-++..+.+|+++-++.+|+++.....+..+||.+.+.+.+..| -|..+.
T Consensus 334 ~~~-~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~ 412 (438)
T COG2270 334 YLI-FLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVL 412 (438)
T ss_pred HHH-HccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHH
Confidence 553 444345677888999999999999999999999999999999999999999999999999999988765 677777
Q ss_pred HHHHHHHHHHHHHHHhccC
Q 011781 274 IFGLLGIAWFSGFKILQEG 292 (477)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~ 292 (477)
...++.++.+++....+.+
T Consensus 413 ~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 413 SIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred HHHHHHHhhHhhEEeecCC
Confidence 6666666666665555544
No 186
>PRK10054 putative transporter; Provisional
Probab=99.27 E-value=1.1e-10 Score=114.05 Aligned_cols=144 Identities=16% Similarity=0.057 Sum_probs=116.5
Q ss_pred hhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhhccchh
Q 011781 142 HRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSP 221 (477)
Q Consensus 142 ~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~ 221 (477)
++.+.+....+++.+.+.+.....+++.|++.||+++|+.+..+..+.+++...+....++.+.+++..++.|++.+...
T Consensus 237 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 316 (395)
T PRK10054 237 ADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYA 316 (395)
T ss_pred cccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHH
Confidence 45566777788888888888888888999999999999999888877777766554333566667778899999988888
Q ss_pred hhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHHHHHHHHHHHHHHH
Q 011781 222 SAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGF 286 (477)
Q Consensus 222 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~ 286 (477)
|.....+.+..|++.++++++..+ ...+|..+||.++|.+.++.|....|++.++...+..+..
T Consensus 317 p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~ 380 (395)
T PRK10054 317 PGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAWLLM 380 (395)
T ss_pred hhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHH
Confidence 888899999999999999998765 5668999999999999999999888888665555444333
No 187
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.26 E-value=1.1e-10 Score=111.19 Aligned_cols=160 Identities=14% Similarity=0.109 Sum_probs=131.8
Q ss_pred HHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHH
Q 011781 133 LSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVL 212 (477)
Q Consensus 133 ~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 212 (477)
+..+...+.++-+.++..+|.+.++..+.-++.-.+..++.+|+|.|+.++++.+++++=..+++ ++++.+.+.+.+.+
T Consensus 243 f~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~-~~~~~~~i~~~klL 321 (412)
T PF01306_consen 243 FPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSG-FATNPWVISLIKLL 321 (412)
T ss_dssp HHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH-T--SHHHHHHHHHH
T ss_pred HHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHh-hhcchHHHHHHHHH
Confidence 33344444444455667899999999999999999999999999999999999999888887775 66777889999999
Q ss_pred HHhhccchhhhHHHHhhhhcCCcchhhHHHHH-HhhhhhHHHHHHhhhHHhhcccChhHHHHHHHHHHHHHHHHHHHhcc
Q 011781 213 VGIGEGVSPSAATDLIARSIPLEERSRAVSFV-FGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQE 291 (477)
Q Consensus 213 ~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 291 (477)
.|+-.+....+...++.+.+|++..++...+. +...++|.++.+.++|.+.|+.|.+.+|++.+.+.++..++..+..+
T Consensus 322 H~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~ 401 (412)
T PF01306_consen 322 HALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLK 401 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-
T ss_pred HHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeec
Confidence 99999999999999999999988888888884 78889999999999999999999999999999888777666665544
Q ss_pred CC
Q 011781 292 GE 293 (477)
Q Consensus 292 ~~ 293 (477)
++
T Consensus 402 ~~ 403 (412)
T PF01306_consen 402 KD 403 (412)
T ss_dssp -S
T ss_pred CC
Confidence 43
No 188
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.25 E-value=1.9e-10 Score=100.76 Aligned_cols=151 Identities=19% Similarity=0.176 Sum_probs=117.0
Q ss_pred HhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhhc
Q 011781 138 IPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGE 217 (477)
Q Consensus 138 ~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~ 217 (477)
..+++.+|+|+...+.+.+.......+.+++.|.++||+|++.+++.+..+..+..-...+++ .+.-++...+.|+..
T Consensus 289 ~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft--~lsPy~~m~~lGLsy 366 (459)
T KOG4686|consen 289 MFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFFT--FLSPYTSMTFLGLSY 366 (459)
T ss_pred HHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHhh--hccHHHHHHHHhhhH
Confidence 347889999999999999988888899999999999999999988877665554432221222 233457788899998
Q ss_pred cchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccC---h-hHHHHHHHHHHHHHHHHHHHhc
Q 011781 218 GVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG---W-ESVFYIFGLLGIAWFSGFKILQ 290 (477)
Q Consensus 218 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g---~-~~~~~~~~~~~~~~~~~~~~~~ 290 (477)
+......+..++...|+++.|++.|..+...++|-++.|+++|++.++-| | +..|++.+.+++....+.+.+.
T Consensus 367 sllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil~~~N 443 (459)
T KOG4686|consen 367 SLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGILFYLN 443 (459)
T ss_pred HHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHHHhhee
Confidence 88877788899999999999999999999999999999999999998755 3 3344445555555544444443
No 189
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.25 E-value=1.5e-10 Score=115.94 Aligned_cols=175 Identities=16% Similarity=0.053 Sum_probs=118.2
Q ss_pred HHHHHHHHHHHHhhhhHHHHhHHhh-hhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHH--------HHHH
Q 011781 116 IGTTSLAFVICNMDKVNLSVAIIPM-SHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVL--------QTGV 186 (477)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~--------~~~~ 186 (477)
+..+.+..+........+..++|.+ .+.+|.+..+.|+..++..++..++.++.|+++||+++|+.. ..+.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 342 (465)
T TIGR00894 263 VWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGI 342 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 3444555556666666666677765 566899999999999999999999999999999998654221 1111
Q ss_pred HHHHHH--HHHHHHhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhc
Q 011781 187 LIWSLA--TALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE 264 (477)
Q Consensus 187 ~~~~~~--~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~ 264 (477)
.+...+ .+.......+....+++..+.+.+.+...+.......+..| +.+|.++++.+....+|++++|.+.|.+.+
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~ 421 (465)
T TIGR00894 343 GGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAP-RFLGFIKGITGLPGFIGGLIASTLAGNILS 421 (465)
T ss_pred HHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcCh-hHHHHHHHHHHHHHHHHHHHHHHhhheeeC
Confidence 111111 11111112233334444555555555555555556667666 589999999999999999999999998876
Q ss_pred cc---ChhHHHHHHHHHHHHHHHHHHHhcc
Q 011781 265 NL---GWESVFYIFGLLGIAWFSGFKILQE 291 (477)
Q Consensus 265 ~~---g~~~~~~~~~~~~~~~~~~~~~~~~ 291 (477)
.. +|+..|++.+++.++..++...+.+
T Consensus 422 ~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~ 451 (465)
T TIGR00894 422 QDSKNVWLIVFLIMAFVNILCVIFYLIFGS 451 (465)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHeeeeec
Confidence 53 3888999888877777666555443
No 190
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.20 E-value=3.2e-10 Score=111.42 Aligned_cols=161 Identities=14% Similarity=0.095 Sum_probs=111.3
Q ss_pred HHHHHHHHHHhhhhHHHHhHHhhhhhh--CCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhH-HHHHHHHHHHHHH
Q 011781 118 TTSLAFVICNMDKVNLSVAIIPMSHRF--GWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKV-LQTGVLIWSLATA 194 (477)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~-~~~~~~~~~~~~~ 194 (477)
...+..++.......+..++|.+.+++ |.+..+.+...+...++..++.++.|+++||+++|+. .....++.+++.+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~ 325 (412)
T TIGR02332 246 LYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWL 325 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHH
Confidence 334444455555666777888877764 6678888999999999999999999999999997775 3333333333332
Q ss_pred HHHHhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccC-hhHHHH
Q 011781 195 LLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG-WESVFY 273 (477)
Q Consensus 195 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g-~~~~~~ 273 (477)
+. ....+....+++.++.+++.....+.......+.+|+++|++++|+.+....+|.+++|.+.|.+.+..| |++.++
T Consensus 326 ~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~ 404 (412)
T TIGR02332 326 LA-SATDHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATGSFNSGLW 404 (412)
T ss_pred HH-HhcCCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhHH
Confidence 22 2222212222222333333333334444555677888999999999999999999999999999999875 999998
Q ss_pred HHHHHH
Q 011781 274 IFGLLG 279 (477)
Q Consensus 274 ~~~~~~ 279 (477)
+.+++.
T Consensus 405 ~~~~~~ 410 (412)
T TIGR02332 405 FVAALL 410 (412)
T ss_pred HHHHHH
Confidence 776644
No 191
>PRK10133 L-fucose transporter; Provisional
Probab=99.20 E-value=6.7e-10 Score=109.84 Aligned_cols=141 Identities=16% Similarity=0.096 Sum_probs=111.6
Q ss_pred hhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhhccch
Q 011781 141 SHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVS 220 (477)
Q Consensus 141 ~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~ 220 (477)
.+.+|.++.+.++....+.++..++.++.|++.||+|+|+++..+.++..++.++.. ..++. ..++..++.|++.+..
T Consensus 287 ~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~-~~~~~-~~~~~~~l~glg~~~i 364 (438)
T PRK10133 287 EEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISA-FAGGH-VGLIALTLCSAFMSIQ 364 (438)
T ss_pred hhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH-HcCCh-HHHHHHHHHHHHHHHH
Confidence 356899999999999999999999999999999999999998888766655554443 33332 2345677899999999
Q ss_pred hhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccC-hhHHHHHHHHHHHHHHHH
Q 011781 221 PSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG-WESVFYIFGLLGIAWFSG 285 (477)
Q Consensus 221 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g-~~~~~~~~~~~~~~~~~~ 285 (477)
+|...+...+..+ ++.+.+.++... ..+|..++|.+.|.+.+..| .+..|++..+..+.....
T Consensus 365 ~P~~~s~a~~~~~-~~~~~as~l~~~-~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~~~~ 428 (438)
T PRK10133 365 YPTIFSLGIKNLG-QDTKYGSSFIVM-TIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFIF 428 (438)
T ss_pred HHHHHHHHHcccc-hhhccchhHHhH-HhccchHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHH
Confidence 9999999999887 456778887764 45788899999999999887 788888765555444433
No 192
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.19 E-value=8.4e-10 Score=106.36 Aligned_cols=141 Identities=14% Similarity=0.023 Sum_probs=108.7
Q ss_pred HHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhh-cChhHHHHHHHHHHHHHHHHHHhhchH
Q 011781 125 ICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIF-GGRKVLQTGVLIWSLATALLPLLAGFM 203 (477)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~~~~ 203 (477)
+..........+.|.+.++.|.+..+.+.+.++..++.+++.++.|++.||+ +||+.+..+.++.+++.+++....++
T Consensus 208 ~~~~~~~~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 286 (355)
T TIGR00896 208 LQSGLYYSLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMH- 286 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhh-
Confidence 3334444455667877778899999999999999999999999999999999 56666667766666666555433322
Q ss_pred HHHHHHHHHHHhhccchhhhHHHHhhhhcC-CcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccC
Q 011781 204 PGLVLSRVLVGIGEGVSPSAATDLIARSIP-LEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG 267 (477)
Q Consensus 204 ~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g 267 (477)
... ...++.|++.+...+...+.+.+..+ +++++...++.+....++..++|.+.|++.++.|
T Consensus 287 ~~~-~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 287 GLW-AWALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHH-HHHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 222 24578899999988888787776554 4667899999999999999999999999998876
No 193
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.19 E-value=4.5e-10 Score=109.93 Aligned_cols=152 Identities=17% Similarity=0.136 Sum_probs=114.8
Q ss_pred HHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhh-hcChhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHH
Q 011781 134 SVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKI-FGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVL 212 (477)
Q Consensus 134 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 212 (477)
....|.+.++.+.++.+.+++.++..++...+..+.+++.|| ++.++.+..+.++.+++.+++. ..++.+.+++..++
T Consensus 228 ~~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~l 306 (400)
T PRK11646 228 MLMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIG-MVSNLQQLFTLICL 306 (400)
T ss_pred HHhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHH
Confidence 345677666666678888999888887777666666776654 6666667777777777766554 45555666677788
Q ss_pred HHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhccc---C-hhHHHHHHHHHHHHHHHHH
Q 011781 213 VGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL---G-WESVFYIFGLLGIAWFSGF 286 (477)
Q Consensus 213 ~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~---g-~~~~~~~~~~~~~~~~~~~ 286 (477)
.+++.+...|...+++.+..|+++||+++|+.+....+|..+||.++|++.++. + ....+++.+++.++..+..
T Consensus 307 ~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (400)
T PRK11646 307 FYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLLAL 384 (400)
T ss_pred HHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHHHH
Confidence 888888888899999999999999999999999999999999999999999874 3 3455555555555554443
No 194
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.17 E-value=1.2e-08 Score=91.09 Aligned_cols=165 Identities=16% Similarity=0.152 Sum_probs=124.2
Q ss_pred HHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhh----
Q 011781 125 ICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLA---- 200 (477)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~---- 200 (477)
........++.+-|.+.+.+|+|.+|...+.+...+|..+ .++.|.+.|++|++.++.+|.+...++........
T Consensus 13 ~~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i 91 (250)
T PF06813_consen 13 LCSGTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRI 91 (250)
T ss_pred HhcCcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 3334667788889999999999999999999999999876 58899999999999999999988888877664321
Q ss_pred --chHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHHHHHHH
Q 011781 201 --GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLL 278 (477)
Q Consensus 201 --~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~~~~~ 278 (477)
..+|.+.+..++.|.+.+....+......+.+| ++||.+.|+.-...++++.+-..+...+.+. +-...+.+.++.
T Consensus 92 ~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~-~~~~fll~la~~ 169 (250)
T PF06813_consen 92 PSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGD-DPSSFLLFLAVL 169 (250)
T ss_pred CccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCC-ChHHHHHHHHHH
Confidence 245677777777877766666777777778897 6899999999999999998887777766655 333333444443
Q ss_pred H-HHHHHHHHHhccC
Q 011781 279 G-IAWFSGFKILQEG 292 (477)
Q Consensus 279 ~-~~~~~~~~~~~~~ 292 (477)
. ++.++...+++..
T Consensus 170 ~~~v~l~~~~~vr~~ 184 (250)
T PF06813_consen 170 PAVVCLVAMFFVRPV 184 (250)
T ss_pred HHHHHHHHhhheecc
Confidence 3 3344444444433
No 195
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.17 E-value=7.9e-10 Score=107.82 Aligned_cols=173 Identities=14% Similarity=0.076 Sum_probs=117.1
Q ss_pred HHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHH
Q 011781 118 TTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLP 197 (477)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~ 197 (477)
.+++.++..+.....++.++|.+.++ ..+.........+..+...+..+++|+++||+|+++++.++.++..++.....
T Consensus 256 llslly~~tFG~fvg~s~~lp~~~~~-~~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~ 334 (462)
T PRK15034 256 LLSLLYLATFGSFIGFSAGFAMLAKT-QFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLF 334 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HcChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHH
Confidence 33444455555555566666665444 22333333334455677888999999999999999999988876666553321
Q ss_pred -Hhh----chHHHHHHHHHHHHhhccchhhhHHHHhhhhcCC---------------------cchhhHHHHHHhhhhhH
Q 011781 198 -LLA----GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPL---------------------EERSRAVSFVFGGLSFG 251 (477)
Q Consensus 198 -~~~----~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~---------------------~~r~~~~~~~~~~~~~g 251 (477)
... .+++.+.+..+...++.|........++.+.+|+ ++-|.+.|+......+|
T Consensus 335 l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~G 414 (462)
T PRK15034 335 LTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVG 414 (462)
T ss_pred HHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcc
Confidence 222 2345555555555566666667777888888874 15678899999999999
Q ss_pred HHHHHhhhHHhhcccC-hhHHHHHHHHHHHHHHHHHHHhcc
Q 011781 252 SVAGLLLAPPIIENLG-WESVFYIFGLLGIAWFSGFKILQE 291 (477)
Q Consensus 252 ~~ig~~~~~~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~ 291 (477)
+.+-|.+.|...+..| +...|+...+..+++.++.+....
T Consensus 415 gf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~y~ 455 (462)
T PRK15034 415 GFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLVYG 455 (462)
T ss_pred cchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999988888777654 888888888887777666555443
No 196
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.16 E-value=2.5e-08 Score=101.99 Aligned_cols=156 Identities=19% Similarity=0.226 Sum_probs=124.5
Q ss_pred HHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhh-hcChhHHHHHHHHHHHHHHHHHHhhc-------hHHH
Q 011781 134 SVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKI-FGGRKVLQTGVLIWSLATALLPLLAG-------FMPG 205 (477)
Q Consensus 134 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 205 (477)
..+..++.+.+|.+...+..+...+....-+.++++|.++|+ +|+++.+.++.++..++..++...+. ....
T Consensus 8 aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~ 87 (654)
T TIGR00926 8 TILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLL 87 (654)
T ss_pred HHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHH
Confidence 344455566789999998888888888888999999999996 69999999999988888877643211 1123
Q ss_pred HHHHHHHHHhhccchhhhHHHHhhhhcCCc---chhhHHHHHHhhhhhHHHHHHhhhHHhhccc-------ChhHHHHHH
Q 011781 206 LVLSRVLVGIGEGVSPSAATDLIARSIPLE---ERSRAVSFVFGGLSFGSVAGLLLAPPIIENL-------GWESVFYIF 275 (477)
Q Consensus 206 ~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~-------g~~~~~~~~ 275 (477)
.+++..+..+|.+++-|...+...|.++++ ++...+.++..+.++|+.+++.+.+++.+.. +|...|.+.
T Consensus 88 ~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~ 167 (654)
T TIGR00926 88 DLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVP 167 (654)
T ss_pred HHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHH
Confidence 567778888999999999999999999754 3677888899999999999999999887443 699999999
Q ss_pred HHHHHHHHHHHHHh
Q 011781 276 GLLGIAWFSGFKIL 289 (477)
Q Consensus 276 ~~~~~~~~~~~~~~ 289 (477)
+++.++.+++....
T Consensus 168 ~i~m~ia~lvf~~g 181 (654)
T TIGR00926 168 AILMILALIVFMAG 181 (654)
T ss_pred HHHHHHHHHHHHHh
Confidence 88888776665543
No 197
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.16 E-value=7.6e-10 Score=107.83 Aligned_cols=142 Identities=18% Similarity=0.221 Sum_probs=102.8
Q ss_pred hHHHHhHHh-hhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhh----chHHH
Q 011781 131 VNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLA----GFMPG 205 (477)
Q Consensus 131 ~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~----~~~~~ 205 (477)
.......|. +.+++|.++.+.+++.+...++..++.++.|++.||+|+|+.+..+..+..++.+++.... +....
T Consensus 223 ~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (385)
T TIGR00710 223 FAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSWAM 302 (385)
T ss_pred HHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccchHHH
Confidence 334444555 4557899999999999999999999999999999999999998888777666655543221 23344
Q ss_pred HHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHH
Q 011781 206 LVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFY 273 (477)
Q Consensus 206 ~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~ 273 (477)
+++..++.|++.+...+.......+..| ++++++.++.+.....++.+++.+.+.+.+..+|...+.
T Consensus 303 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~ 369 (385)
T TIGR00710 303 IIGPMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVSLIHGNTAWPMSLS 369 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHHhccccChHHHHHH
Confidence 5556778889888888888888888876 689999999888776544444444455544444443333
No 198
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.14 E-value=1.3e-09 Score=107.72 Aligned_cols=153 Identities=20% Similarity=0.152 Sum_probs=124.0
Q ss_pred HHHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHH
Q 011781 116 IGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATAL 195 (477)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 195 (477)
+..+++..++............+++.++.--++...+.+..+..++..++.+++++++||+|+|+.+..+.++.+++.++
T Consensus 227 ~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~ 306 (428)
T PF13347_consen 227 FRILLLAFFLQWLAFALMNTFLPYYFTYVLGNEGLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLL 306 (428)
T ss_pred HHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHH
Confidence 33455555566666666666666655553334467788888999999999999999999999999999999999888887
Q ss_pred HHHhh-chHHHHHHHHHHHHhhccchhhhHHHHhhhhcCC-------cchhhHHHHHHhhhhhHHHHHHhhhHHhhcccC
Q 011781 196 LPLLA-GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPL-------EERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG 267 (477)
Q Consensus 196 ~~~~~-~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~-------~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g 267 (477)
..+.. ++.+.+++..++.|++.+..++...++++|..+. ++.|..+|..+....+|..+++.+.+.+.+..|
T Consensus 307 ~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~G 386 (428)
T PF13347_consen 307 LFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVG 386 (428)
T ss_pred HHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhC
Confidence 76554 5778899999999999999999999999998863 345889999999999999999999998876654
Q ss_pred h
Q 011781 268 W 268 (477)
Q Consensus 268 ~ 268 (477)
+
T Consensus 387 y 387 (428)
T PF13347_consen 387 Y 387 (428)
T ss_pred c
Confidence 3
No 199
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.13 E-value=2e-09 Score=105.21 Aligned_cols=138 Identities=16% Similarity=0.127 Sum_probs=93.3
Q ss_pred hHHh-hhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHH
Q 011781 136 AIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVG 214 (477)
Q Consensus 136 ~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 214 (477)
..|. +.+++|.++.+.+.+.+...++.+++.++.+++.||+|+|+.+.++..+..++.+++. .....+..++...+.+
T Consensus 225 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~ 303 (392)
T PRK10473 225 TSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLA-LSPSHAVSLFGITLIC 303 (392)
T ss_pred hCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 3443 5567899999999999999999999999999999999999999988887777766654 3333333334444444
Q ss_pred hhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHHHHHHHH
Q 011781 215 IGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLG 279 (477)
Q Consensus 215 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~~~~~~ 279 (477)
.+.+...+.. ...+..|.++|+ +.......++..+|+.+++++.+..|+.....+.+++.
T Consensus 304 ~g~~~~~~~~--~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~~~g~~~~~~~~~~~~ 363 (392)
T PRK10473 304 AGFSVGFGVA--MSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAAVLGISAWNMLIGILI 363 (392)
T ss_pred HHHHHHhHHH--HHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHH
Confidence 4433333332 233344544443 44455566788888888888888888776555555443
No 200
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.12 E-value=3.4e-09 Score=103.53 Aligned_cols=148 Identities=15% Similarity=0.077 Sum_probs=115.2
Q ss_pred hhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhhcc
Q 011781 139 PMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEG 218 (477)
Q Consensus 139 ~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~ 218 (477)
.+.+.+|.++.+.|++.+...++.++++++.+++.||.++++.+..+. +.++..+++. ..++++...+..++.|++.+
T Consensus 231 ~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~-~~~~~~~~~~-~~~~~~~~~~~~~~~G~~~g 308 (393)
T PRK11195 231 WAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGI-LMGLVVLLMA-LQHSLLPAYPLLILIGALGG 308 (393)
T ss_pred HHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHH-HHHHHHHHHH-HHhHHHHHHHHHHHHHHhhh
Confidence 355668999999999999999999999999999999999998887774 3344443443 34555666777888999988
Q ss_pred chhhhHHHHhhhhcCCcc-hhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHHHHHHHHHHHHHHHHHh
Q 011781 219 VSPSAATDLIARSIPLEE-RSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKIL 289 (477)
Q Consensus 219 ~~~~~~~~~i~~~~~~~~-r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 289 (477)
...+...+.+.+..|++. +|++.++.+...++|..++..+.+.+ +..|-+..+++.++..++.+.+.+..
T Consensus 309 ~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (393)
T PRK11195 309 FFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL-VKLGVPVVAVIVGFGLLVALAMALLW 379 (393)
T ss_pred hhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 888888888888766544 79999999999999999999999865 56787777777666555554444433
No 201
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.11 E-value=2.3e-09 Score=119.63 Aligned_cols=148 Identities=18% Similarity=0.181 Sum_probs=119.8
Q ss_pred HHHHhHHh-hhhhhCCCcc-hhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhchHHHHHHH
Q 011781 132 NLSVAIIP-MSHRFGWNSS-VAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLS 209 (477)
Q Consensus 132 ~~~~~~~~-~~~~~g~s~~-~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (477)
.....+|. +.+.+|.+.. +.|++.+...++.+++.+++|++.||+++++.+.++.++.+++.+++. ...+.+.++++
T Consensus 250 ~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 328 (1146)
T PRK08633 250 LAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLP-TAPSLASVLVL 328 (1146)
T ss_pred HHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHH-HhhhHHHHHHH
Confidence 33344444 5677899998 999999999999999999999999999999988888777777766664 44566777788
Q ss_pred HHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhc-ccChhHHHHHHHHHHH
Q 011781 210 RVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE-NLGWESVFYIFGLLGI 280 (477)
Q Consensus 210 ~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~-~~g~~~~~~~~~~~~~ 280 (477)
.++.|++.+...+...+++.+..|++.||+++|+.+....+|.++++.+++.+.. .+++...+++.+.+.+
T Consensus 329 ~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 400 (1146)
T PRK08633 329 FFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTL 400 (1146)
T ss_pred HHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 8999999999889999999999999999999999999999999888888877654 2355556666555443
No 202
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.11 E-value=4.3e-09 Score=101.45 Aligned_cols=167 Identities=15% Similarity=-0.029 Sum_probs=113.1
Q ss_pred HHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcC---hhHHHH-HHHHHHHH
Q 011781 117 GTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGG---RKVLQT-GVLIWSLA 192 (477)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~---r~~~~~-~~~~~~~~ 192 (477)
..+.+..++.......+..++|.+.++.|.+.. .+...++..+...++ .++++||..| |+.... ..++.++.
T Consensus 195 ~~~~~~~~~~~~~~~~~~~wlp~~L~~~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~~r~~~r~~~~~~~~~~~a~~ 270 (368)
T TIGR00903 195 WIIGAILGFGVALFDNLAIWLEAALRPAGLEDI-AGDAVALAILAGLIG---VAVIPDRVARAGLRSIYIRAAALLIAAF 270 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCChH-HHHHHHHHHHHHHHH---HHHhhHHhhhhhhHHHHHHHHHHHHHHH
Confidence 344444555555566667788887788887754 566666655555555 4677777654 333332 33333333
Q ss_pred HHHHHHhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHH
Q 011781 193 TALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVF 272 (477)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~ 272 (477)
..... ...+....+++..+.+++.....+...++.+|.+|++.|+++.|+.+....+|++++|.+.+.+.. |.+..|
T Consensus 271 ~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~~~~~f 347 (368)
T TIGR00903 271 FLALA-FELNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS--SAEAYF 347 (368)
T ss_pred HHHHH-HccccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc--CHHHHH
Confidence 33332 233334445566667777777778888999999999999999999999999999999999988774 777888
Q ss_pred HHHHHHHHHHHHHHHHhc
Q 011781 273 YIFGLLGIAWFSGFKILQ 290 (477)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~ 290 (477)
.+.++..++..+....++
T Consensus 348 ~~~~~~~~i~~~~~~~~~ 365 (368)
T TIGR00903 348 TFLAILITIAFAIALLLP 365 (368)
T ss_pred HHHHHHHHHHHHHHHhCC
Confidence 888877777666654333
No 203
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.09 E-value=3.1e-09 Score=103.30 Aligned_cols=131 Identities=17% Similarity=0.060 Sum_probs=89.5
Q ss_pred hhHHHHhHHh-hhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHH---HhhchHHH
Q 011781 130 KVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLP---LLAGFMPG 205 (477)
Q Consensus 130 ~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~---~~~~~~~~ 205 (477)
...+....|. +.+++|.++.+.|++.+...++..++.++.|++.||+|+|+.+..+..+..+..+... ....+.+.
T Consensus 210 ~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (377)
T PRK11102 210 MFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWA 289 (377)
T ss_pred HHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 3333334444 5566899999999999999999999999999999999999998887765433322221 11223344
Q ss_pred HHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhh-hhhHHHHHHhhhHH
Q 011781 206 LVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGG-LSFGSVAGLLLAPP 261 (477)
Q Consensus 206 ~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~-~~~g~~ig~~~~~~ 261 (477)
..+...+.+.+.+...+.....+.+..| +++++++++.+.. ..+|..+++++++.
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~~~~ 345 (377)
T PRK11102 290 LVVGVAAFVGCVSMISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALLSLA 345 (377)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4444444555555555566667777766 7899999987664 45777777776553
No 204
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=99.09 E-value=6.3e-07 Score=87.74 Aligned_cols=274 Identities=11% Similarity=-0.002 Sum_probs=163.0
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHhHHhhhhhhCC-----CcchhhHHHHHHHHHHHHh-hhhhhhhhhhhcChhHHHHHHH
Q 011781 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGW-----NSSVAGLVQSSFFWGYALS-QLPGGWLAKIFGGRKVLQTGVL 187 (477)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-----s~~~~g~~~~~~~~~~~~~-~~~~g~l~dr~g~r~~~~~~~~ 187 (477)
+.+..+.+..|+..+.++.. -.+.+.+.+ +...+.++-+...+...+. .++.+++++|++|++++.....
T Consensus 7 ~k~~~~~l~fF~il~~Y~iL----R~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~ 82 (472)
T TIGR00769 7 KKFLPLFLMFFCILFNYTIL----RDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVIS 82 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHH----HhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHH
Confidence 33444444555444444433 334555544 4467888888887777766 8899999999999999887666
Q ss_pred HHHHHHHHHHHh----hch--------------------------HHHHHHHHHHHHhhccchhh-hHHHHhhhhcCCcc
Q 011781 188 IWSLATALLPLL----AGF--------------------------MPGLVLSRVLVGIGEGVSPS-AATDLIARSIPLEE 236 (477)
Q Consensus 188 ~~~~~~~~~~~~----~~~--------------------------~~~~~~~~~l~g~~~~~~~~-~~~~~i~~~~~~~~ 236 (477)
.+.+..+++++. .+. .|...+..+...+-.....+ ..++++.|.++.+|
T Consensus 83 ~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~q 162 (472)
T TIGR00769 83 PFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDE 162 (472)
T ss_pred HHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH
Confidence 655555444333 010 12222333334444444444 77889999999999
Q ss_pred hhhHHHHHHhhhhhHHHHHHhhhHHhhcc-------c-Chh----HHHHHHHHHHHHHHHHHHHhccCCcCCCCCCCCcc
Q 011781 237 RSRAVSFVFGGLSFGSVAGLLLAPPIIEN-------L-GWE----SVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRS 304 (477)
Q Consensus 237 r~~~~~~~~~~~~~g~~ig~~~~~~l~~~-------~-g~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (477)
-.|..++...+.++|.++++.+..++.+. . .|. ..+.+.+++.++...+..++.+....++ ...+.+
T Consensus 163 akRfy~l~~~ganlg~i~sg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~ 241 (472)
T TIGR00769 163 AKRFYALFGLGANVALIFSGRTIKYFSKLRASLGPGVDGWHVSLKNLMVIVICSGLAIILLYWWVNRNVLTDP-RSYNPA 241 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCc-cccchh
Confidence 99999999999999999999998887631 1 232 2333444444444444444433221111 000000
Q ss_pred hhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHhhCCchhh----hHHHHHH
Q 011781 305 NYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTE----AAWVSIL 380 (477)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~----~g~~~~~ 380 (477)
+. ..++.++..-..+++.++++|.++.+++...+++.+...+..-.-..+.+.+- ++.+ .|.+...
T Consensus 242 ~~---------~~k~k~k~~~~es~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~p-~~~~~~~f~g~~~~~ 311 (472)
T TIGR00769 242 LK---------EKKVKPKMSTMESLKFLVSSPYILDLALLVIAYGISINLVEVTWKSKLKAQYP-SPNEYSAFMGDFSTW 311 (472)
T ss_pred hc---------cccCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHH
Confidence 00 00000000112346788999999998888888877766666555555555432 3322 3445555
Q ss_pred HHHHHHHHHHhhhhchhHHHhc
Q 011781 381 PPLASVLVTSIAAQFADNLIAT 402 (477)
Q Consensus 381 ~~~~~~~~~~~~g~l~dr~g~~ 402 (477)
.++..++..++.+++.+|+|-+
T Consensus 312 ~gi~tl~~~l~~~~l~~~~Gw~ 333 (472)
T TIGR00769 312 TGVVSVTMMLLSGNVIRKYGWL 333 (472)
T ss_pred HHHHHHHHHHHHHHHHHHhhHH
Confidence 5666666677778999998765
No 205
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.09 E-value=5.4e-10 Score=107.37 Aligned_cols=136 Identities=26% Similarity=0.304 Sum_probs=109.5
Q ss_pred HHHHHHHhhhhHHHHhHHhh-hhhhCCC-cchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHH
Q 011781 121 LAFVICNMDKVNLSVAIIPM-SHRFGWN-SSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPL 198 (477)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~-~~~~g~s-~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 198 (477)
...+.............|.+ .+++|.+ ..+.+...++..+...++.++.|++.||+++|+..........+..+.+..
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (352)
T PF07690_consen 213 IAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLL 292 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCC
T ss_pred hhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHH
Confidence 33334444555577777775 8889999 789999999999999999999999999999987777766665555544432
Q ss_pred h--hchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHH
Q 011781 199 L--AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGL 256 (477)
Q Consensus 199 ~--~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~ 256 (477)
. .++....++..++.|++.+...+....++.+..|++++|++.|+.+...++|..+||
T Consensus 293 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 293 LPFSSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp SHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 2 223456667888899999999999999999999999999999999999999999987
No 206
>PRK09848 glucuronide transporter; Provisional
Probab=99.09 E-value=9.3e-10 Score=109.55 Aligned_cols=151 Identities=14% Similarity=0.092 Sum_probs=111.4
Q ss_pred HHHHHHHHHHhhhhHHHHhHHhh-hhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHH
Q 011781 118 TTSLAFVICNMDKVNLSVAIIPM-SHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALL 196 (477)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 196 (477)
...+..++............|.+ .+.+|.+....++......++.+++.++++++.||+|+|+.+.++.++..++.+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~ 311 (448)
T PRK09848 232 MLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLF 311 (448)
T ss_pred HHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence 33333444444444455555554 44567666554554555567788899999999999999999999988877776665
Q ss_pred HHhh-chHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCc-------chhhHHHHHHhhhhhHHHHHHhhhHHhhcccCh
Q 011781 197 PLLA-GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLE-------ERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGW 268 (477)
Q Consensus 197 ~~~~-~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~-------~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~ 268 (477)
.... .+++.+++..++.|+|.+...+...++.+|..|.+ ++|..+|+.+....+|..+|+.+.+.+.+..|+
T Consensus 312 ~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 312 FWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 4322 34566667788899999999999999999988654 358999999999999999999999988766554
No 207
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.08 E-value=2.5e-09 Score=118.98 Aligned_cols=162 Identities=12% Similarity=0.028 Sum_probs=123.4
Q ss_pred HHHHHHHHhhhhHHHHhHHh-hhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHH
Q 011781 120 SLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPL 198 (477)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 198 (477)
.+..+...+....+....|. +.+.+|.+..+.|++.+.+.++.+++.++.|++.|+.++++.+..+.++.+++.+.+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 310 (1140)
T PRK06814 231 ILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAF 310 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHh
Confidence 33333333344444445555 45568999999999999999999999999999999888777666665555554443322
Q ss_pred h-------------------hchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhh
Q 011781 199 L-------------------AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLA 259 (477)
Q Consensus 199 ~-------------------~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~ 259 (477)
. ..+.+.+++..++.|++.+...+...+++.+.+|++.||+++|+.++...+|..++++++
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~ 390 (1140)
T PRK06814 311 ASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIIL 390 (1140)
T ss_pred cccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHH
Confidence 1 145567778889999999999999999999999999999999999999999999999999
Q ss_pred HHhhc-ccChhHHHHHHHHHHHH
Q 011781 260 PPIIE-NLGWESVFYIFGLLGIA 281 (477)
Q Consensus 260 ~~l~~-~~g~~~~~~~~~~~~~~ 281 (477)
+.+.+ ..++...+++.+++.++
T Consensus 391 g~l~~~~~~~~~~~~~~~~~~~~ 413 (1140)
T PRK06814 391 ALLQALGFSIPWIILFIALANLI 413 (1140)
T ss_pred HHHHHhccCHHHHHHHHHHHHHH
Confidence 98874 45677777665554443
No 208
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.07 E-value=4.2e-10 Score=102.40 Aligned_cols=134 Identities=12% Similarity=0.047 Sum_probs=100.5
Q ss_pred HHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcc
Q 011781 157 SFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEE 236 (477)
Q Consensus 157 ~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~ 236 (477)
+..+.-.-|.++.+++.||+|||+.+..+.+++++..++.. ...+-....+..+..-++.++.+.+.+.+..|.+|...
T Consensus 389 itslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~-~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTav 467 (528)
T KOG0253|consen 389 ITSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLT-TCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAV 467 (528)
T ss_pred HHHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHH-HhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhh
Confidence 34455567889999999999999999999999888877663 33332333334444444555666777899999999999
Q ss_pred hhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHHHHHHHHHHHHHHHHHhccCC
Q 011781 237 RSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGE 293 (477)
Q Consensus 237 r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (477)
|+.+.|..+.+..+|+++.|+++ +....+-..+..+.+.++++..+...++|-..
T Consensus 468 RatgvGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcffPiEt 522 (528)
T KOG0253|consen 468 RATGVGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIAVCFFPIET 522 (528)
T ss_pred hhcchhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHHheeeeecc
Confidence 99999999999999999999999 33334455566777777777777777776543
No 209
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.07 E-value=1.2e-08 Score=93.29 Aligned_cols=164 Identities=16% Similarity=0.083 Sum_probs=131.1
Q ss_pred HHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhh-cChhHHHHHHHHHHHHHHHHHHhhch
Q 011781 124 VICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIF-GGRKVLQTGVLIWSLATALLPLLAGF 202 (477)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~~~ 202 (477)
-++....+....++|.+..|.|+|..+.|++.++..+.....++....+++|. ++|+..+...+++.++.+.+.+.+.+
T Consensus 218 GlqS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~ 297 (395)
T COG2807 218 GLQSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQ 297 (395)
T ss_pred HhhHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhh
Confidence 34556667777789999999999999999999999999999999999999965 56666666667777777666544443
Q ss_pred HHHHHHHHHHHHhhccchhhhHHHHhhhhc-CCcchhhHHHHHHhhhhhHHHHHHhhhHHhhccc-ChhHHHHHHHHHHH
Q 011781 203 MPGLVLSRVLVGIGEGVSPSAATDLIARSI-PLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL-GWESVFYIFGLLGI 280 (477)
Q Consensus 203 ~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~-g~~~~~~~~~~~~~ 280 (477)
.+ +...++.|+|.+..++.....+.+.. ++++.++..|+.+...++=..+||.+.|++.|.. +|+..++..+.+.+
T Consensus 298 ~~--~lw~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i 375 (395)
T COG2807 298 LP--ILWALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATL 375 (395)
T ss_pred HH--HHHHHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHH
Confidence 22 22359999999999999999999887 4566788888899999999999999999999876 49988888777776
Q ss_pred HHHHHHHHh
Q 011781 281 AWFSGFKIL 289 (477)
Q Consensus 281 ~~~~~~~~~ 289 (477)
+..+.-+..
T Consensus 376 ~m~i~Gl~a 384 (395)
T COG2807 376 LMLIFGLRA 384 (395)
T ss_pred HHHHHHhhc
Confidence 666555544
No 210
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.07 E-value=9.8e-10 Score=110.02 Aligned_cols=153 Identities=13% Similarity=0.014 Sum_probs=112.6
Q ss_pred HHHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHH
Q 011781 116 IGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATAL 195 (477)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 195 (477)
+..++...++............+++.+....+....+++.++..++.+++.++++++.||+|+|+.+.++..+..++.+.
T Consensus 233 ~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~ 312 (473)
T PRK10429 233 LSCLLGMALAYNIASNIINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGV 312 (473)
T ss_pred HHHHHHHHHHHHHHHHHHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH
Confidence 33444444444455555555656655554445666777878777889999999999999999999998887765555444
Q ss_pred HHH----hhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcC-------CcchhhHHHHHHhhhhhHHHHHHhhhHHhhc
Q 011781 196 LPL----LAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIP-------LEERSRAVSFVFGGLSFGSVAGLLLAPPIIE 264 (477)
Q Consensus 196 ~~~----~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~-------~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~ 264 (477)
... ..++.+.+++..++.|++.+...+...++++|..+ .+..|..+|......-+|..+++.+.|++.+
T Consensus 313 ~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~ 392 (473)
T PRK10429 313 LLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLG 392 (473)
T ss_pred HHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 322 13445666777788999999999999999999965 3334668999999999999999999999887
Q ss_pred ccCh
Q 011781 265 NLGW 268 (477)
Q Consensus 265 ~~g~ 268 (477)
..|+
T Consensus 393 ~~Gy 396 (473)
T PRK10429 393 LIGY 396 (473)
T ss_pred HcCC
Confidence 6654
No 211
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.07 E-value=6.2e-10 Score=107.32 Aligned_cols=127 Identities=16% Similarity=0.120 Sum_probs=100.6
Q ss_pred HHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHH-HHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhh-
Q 011781 123 FVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFF-WGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLA- 200 (477)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~-~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~- 200 (477)
.++............|.+.+++|.+..+++.+.++.. ++..++.+++|++.||+|+|+.+..+.++.+++..+.....
T Consensus 218 ~~~~~~~~~~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~ 297 (356)
T TIGR00901 218 IVLYKLGDSAATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLAS 297 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3334444455556666666669999999998888766 57789999999999999999998888877776665543332
Q ss_pred ---------chHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhh
Q 011781 201 ---------GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLS 249 (477)
Q Consensus 201 ---------~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ 249 (477)
++.+.+..+.++.+++.+...+...+++.+.+|+++||+.+|+.++..+
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 298 NGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred cCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 3346677788899999999999999999999999999999999887654
No 212
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.07 E-value=2.3e-09 Score=107.99 Aligned_cols=144 Identities=16% Similarity=0.129 Sum_probs=116.0
Q ss_pred HHHHHHhhhhHHHHhHHh-hhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhh
Q 011781 122 AFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLA 200 (477)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~ 200 (477)
..+...........+.|. ++..+|.++.+.|+......++..++.++.|++.||+|+|+.+..+.++.+++.+++....
T Consensus 267 ~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~ 346 (495)
T PRK14995 267 MAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTD 346 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhc
Confidence 333333334444455565 4556899999999999999999999999999999999999998888877776665543322
Q ss_pred --chHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcc
Q 011781 201 --GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN 265 (477)
Q Consensus 201 --~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~ 265 (477)
.+.+...+..++.|++.+...+.....+.+..|+++++.+.++.+....+|..+|+.+.|.+.++
T Consensus 347 ~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~~ 413 (495)
T PRK14995 347 FSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLSR 413 (495)
T ss_pred CCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455667889999999999888899999999999999999999999999999999999988653
No 213
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.05 E-value=1.7e-09 Score=94.07 Aligned_cols=320 Identities=16% Similarity=0.115 Sum_probs=177.2
Q ss_pred HHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhch
Q 011781 123 FVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGF 202 (477)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~ 202 (477)
+++...+...-+++.-.+.+.+|....++|.+........+++..+.|.++||-|||+.-+.-.+.+.++++. -.++.
T Consensus 46 yslmmAgDWLQgPYvYyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCiT--KhSpq 123 (454)
T KOG4332|consen 46 YSLMMAGDWLQGPYVYYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCIT--KHSPQ 123 (454)
T ss_pred HHHHHhhhhhcCceeeeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHHh--hcCCc
Confidence 3344455666677777788889999999999988888888889999999999999999765444444333322 23555
Q ss_pred HHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhH-------HHHH-HhhhhhHHHHHHhhhHHhhcccC--hhHHH
Q 011781 203 MPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRA-------VSFV-FGGLSFGSVAGLLLAPPIIENLG--WESVF 272 (477)
Q Consensus 203 ~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~-------~~~~-~~~~~~g~~ig~~~~~~l~~~~g--~~~~~ 272 (477)
+..++++|++.|+..+..+.+..++...-.. ++|+.- ++-. ..+..+-++++.+.+..+.+.++ .-.+|
T Consensus 124 YkVLmVGR~LGGiaTsLLFSaFEsWliaEHn-ekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPF 202 (454)
T KOG4332|consen 124 YKVLMVGRVLGGIATSLLFSAFESWLIAEHN-EKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPF 202 (454)
T ss_pred eEEEeehhhhhhHHHHHHHHHHHHHHHHHhh-hccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCch
Confidence 6789999999999999888887776543322 233322 1211 13444556667777777777654 44555
Q ss_pred HHHHHHHHHHHHHHH-HhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHHHHHHhHHH
Q 011781 273 YIFGLLGIAWFSGFK-ILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWG 351 (477)
Q Consensus 273 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 351 (477)
-..+.+..+...+.+ -..|+-.++.+ .+... +.. +...+.+..++++.++.-...++-..
T Consensus 203 dAAacfLaigmAvil~~W~ENygdps~----~kdll---tqf------------~gaa~aiaSD~ki~LLG~iqsLFE~s 263 (454)
T KOG4332|consen 203 DAAACFLAIGMAVILSSWSENYGDPSE----NKDLL---TQF------------KGAARAIASDEKIALLGAIQSLFEGS 263 (454)
T ss_pred HHHHHHHHHHHHHHHhhhhhccCChhh----hHHHH---HHh------------hHhHHHHhcchHHHHHHHHHHHHhhh
Confidence 554443333322221 11222111111 00000 000 00123455566666655555554444
Q ss_pred HHHHhh-hhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhhhHHHHhhhcc
Q 011781 352 HYTCLS-WLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSI 430 (477)
Q Consensus 352 ~~~~~~-~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~~~~l~~~ 430 (477)
.+.+.. |.|..--+..+ .--|.+++.+.++.++|.-+..++..|-..+ ...... +.++...+.+.+...
T Consensus 264 mytFVFLWTPaLspn~e~---iPhGfiFatFMlASmLGSSla~Rl~s~s~~~------ve~ymq-ivf~vs~a~l~Lpil 333 (454)
T KOG4332|consen 264 MYTFVFLWTPALSPNDEE---IPHGFIFATFMLASMLGSSLASRLLSRSSPK------VESYMQ-IVFLVSIAALLLPIL 333 (454)
T ss_pred hheeeeeecccCCCCccc---CCchhHHHHHHHHHHHhhHHHHHHHhcCCcc------cchHHH-HHHHHHHHHHHHHHH
Confidence 444433 33432211122 2347888999999999988887776664333 122222 222222222222111
Q ss_pred c------CCCchHHHHHHHHHHHHhhhhhhhhhhHhhhccCccchhhhhh
Q 011781 431 D------LGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLY 474 (477)
Q Consensus 431 ~------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~g~~~g 474 (477)
. ..++...++++.++-.+.+.+++.....-.+.+|.+.|++++-
T Consensus 334 t~~vsP~kes~~~s~i~F~~~E~cvGlfwPSimkmRsqyIPEearstimN 383 (454)
T KOG4332|consen 334 TSSVSPSKESPSESLIGFCLFEACVGLFWPSIMKMRSQYIPEEARSTIMN 383 (454)
T ss_pred HhccCCCcCCchHHHHHHHHHHHHHhhcchHHHHHHHhhCCHHHHhhhhh
Confidence 1 1123334555656666656555555555555566666887763
No 214
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.05 E-value=2.4e-09 Score=107.85 Aligned_cols=143 Identities=16% Similarity=0.189 Sum_probs=115.5
Q ss_pred HHHHhhhhHHHHhHHhhh-hhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHH-h--
Q 011781 124 VICNMDKVNLSVAIIPMS-HRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPL-L-- 199 (477)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~-~-- 199 (477)
+...........+.|.+. +.+|.++.+.|+......++..++.++.|++.||+|||+.+.++..+.+++..++.. .
T Consensus 265 ~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~ 344 (485)
T TIGR00711 265 SLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTP 344 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCC
Confidence 333344444455666644 558999999999999999999999999999999999999999888887777766531 1
Q ss_pred hchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhccc
Q 011781 200 AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL 266 (477)
Q Consensus 200 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~ 266 (477)
..+.+.++...++.|++.+...+.......+..|+++++.+.|+.+....+|..+|+.+.+.+.++.
T Consensus 345 ~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~~ 411 (485)
T TIGR00711 345 DTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTNR 411 (485)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1234556677889999998888888888888899999999999999999999999999999888653
No 215
>PRK11043 putative transporter; Provisional
Probab=99.02 E-value=2.1e-08 Score=98.40 Aligned_cols=140 Identities=11% Similarity=0.086 Sum_probs=104.6
Q ss_pred HHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHH---HH-hhchHHHHH
Q 011781 132 NLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALL---PL-LAGFMPGLV 207 (477)
Q Consensus 132 ~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~ 207 (477)
.+....|.+.+++|.+..+.|+......++..++.++.+++.||+++|+.+.....+.+++.+.+ .. ..++.+.++
T Consensus 221 ~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (401)
T PRK11043 221 AWLTGSPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLL 300 (401)
T ss_pred HHHHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHH
Confidence 34445677777889999999998888888999999999999999999987655544444433222 11 123444555
Q ss_pred HHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHH
Q 011781 208 LSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVF 272 (477)
Q Consensus 208 ~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~ 272 (477)
+...+.|++.+...+...+...+..| ++++++.|+.+.....+...++.+.|.+.+.......+
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~ 364 (401)
T PRK11043 301 IPFCVMAAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALISTPLLTTGS 364 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccCCChhHHHH
Confidence 66677888888888888888777776 68999999999998889999999999887754444433
No 216
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.02 E-value=6.5e-08 Score=93.36 Aligned_cols=301 Identities=15% Similarity=0.086 Sum_probs=177.5
Q ss_pred hhHH-HHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhhccchhhhHHHHhh
Q 011781 151 AGLV-QSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIA 229 (477)
Q Consensus 151 ~g~~-~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~ 229 (477)
.|+. .++....+.+++++.+.+.|+.|+|+.++++...+..-.+.+ +..+ -+.+++...+.|+|.+..+.....+++
T Consensus 51 aGy~~~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gf-l~~N-~y~~yfssallG~Gaallw~GqG~ylt 128 (461)
T KOG3098|consen 51 AGYYGQAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGF-LFPN-SYYLYFSSALLGFGAALLWTGQGGYLT 128 (461)
T ss_pred ccHHHHHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHH-Hhcc-hHHHHHHHHHhhhhHHheecccceehh
Confidence 3444 677888888999999999999999999999999887766655 3444 478899999999999999999999999
Q ss_pred hhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhccc--------Chh-H----------HHHHHHHHHHHHHHHHH-Hh
Q 011781 230 RSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL--------GWE-S----------VFYIFGLLGIAWFSGFK-IL 289 (477)
Q Consensus 230 ~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~--------g~~-~----------~~~~~~~~~~~~~~~~~-~~ 289 (477)
+..+++.+.+..++.......+.++|..+...+.... +.+ + ...+.+++..+..+... ..
T Consensus 129 ~~st~~tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~ 208 (461)
T KOG3098|consen 129 SNSTRETIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFD 208 (461)
T ss_pred hcCChhhHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhhee
Confidence 9999999999999999999999988877665443221 111 1 11111111111111110 11
Q ss_pred ccCCcCCCCCCCCcchhhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHh--h
Q 011781 290 QEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEE--L 367 (477)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~ 367 (477)
..+.+......+..+ ....+..+ ..-++++++++..+....+..++.........|..+.-. .
T Consensus 209 ~~p~~~~~~~~~~~~------~~~~~~l~---------~~~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~ 273 (461)
T KOG3098|consen 209 FLPSKDVVNCKSSSE------TSFSELLK---------LTFKLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTRKL 273 (461)
T ss_pred ecCccchhhhhhhcc------ccHHHHHH---------HHHHHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhhhc
Confidence 111100000000000 00000000 123667788888887777776666666666666655422 2
Q ss_pred CCc-hhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhhhHHHHhhhcccCC--C----------
Q 011781 368 SLN-LTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLG--L---------- 434 (477)
Q Consensus 368 g~~-~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~~~~l~~~~~~--~---------- 434 (477)
+.+ ....+......+++.+++....+.+.+|..+.+ |+..+.++..+......+.....+ .
T Consensus 274 ~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg------~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~ 347 (461)
T KOG3098|consen 274 GSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFG------RKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPL 347 (461)
T ss_pred cCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcc------cCcchhHHHHHHHHHHHHHhccccccCCCCCCccccc
Confidence 222 233445556667777777778888887776553 333333333333333332222111 1
Q ss_pred -----chHHHHHHHHHHHHhhhhhhhhhhHhhhccCccchhhhhhh
Q 011781 435 -----PHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLYL 475 (477)
Q Consensus 435 -----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~g~~~gl 475 (477)
.....+..++.|.+=. ........+.+.+.|+++..++++
T Consensus 348 ~~~~~~~~~~ii~~l~G~~D~-~~~t~~~~ii~~~~~~~~~~~fsi 392 (461)
T KOG3098|consen 348 LFTPSYYLALIIGFLLGFGDA-CFNTQRYVIIALLYPDDRAQAFSL 392 (461)
T ss_pred ccccchhHHHHHHHHHhhHHH-HHHHHHHHHHHHHhcCchHHHHHH
Confidence 1123334455555544 444455555566668887777654
No 217
>PRK09669 putative symporter YagG; Provisional
Probab=99.00 E-value=3e-09 Score=105.77 Aligned_cols=141 Identities=10% Similarity=0.054 Sum_probs=101.5
Q ss_pred hhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHh-hchHHHH
Q 011781 128 MDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLL-AGFMPGL 206 (477)
Q Consensus 128 ~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 206 (477)
......+...+++.++.--++...+.+.....+..+++.+++++++||+|+|+.+..+.++..+..+..... .++.+.+
T Consensus 243 ~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (444)
T PRK09669 243 TAVVTRGGATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLI 322 (444)
T ss_pred HHHHHHhhhhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHH
Confidence 333333334444433332233444556666777888888999999999999999988876655433322222 3556667
Q ss_pred HHHHHHHHhhccchhhhHHHHhhhhcCC-------cchhhHHHHHHhhhhhHHHHHHhhhHHhhcccCh
Q 011781 207 VLSRVLVGIGEGVSPSAATDLIARSIPL-------EERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGW 268 (477)
Q Consensus 207 ~~~~~l~g~~~~~~~~~~~~~i~~~~~~-------~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~ 268 (477)
++..++.|++.+...+...++++|..+. +..|..+|..+.+..+|..+|+.++|.+.+..|+
T Consensus 323 ~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 323 FALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 7888899999999999999999998852 2346678899999999999999999999887765
No 218
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.98 E-value=4.5e-09 Score=100.58 Aligned_cols=169 Identities=17% Similarity=0.107 Sum_probs=144.7
Q ss_pred HHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHh
Q 011781 120 SLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLL 199 (477)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 199 (477)
++..++.+.+...+..++-...++.+..+...|........+-++.-++.+++.+|+|+-+++.+++.+..+=++.+. .
T Consensus 377 f~~av~mG~g~~lv~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S-~ 455 (618)
T KOG3762|consen 377 FFVAVVMGAGVGLVFTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYS-Y 455 (618)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHH-H
Confidence 334445555566666666667888998888889888889999999999999999999999999999998888777774 5
Q ss_pred hchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhh-hhhHHHHHHhhhHHhhcccChhHHHHHHHHH
Q 011781 200 AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGG-LSFGSVAGLLLAPPIIENLGWESVFYIFGLL 278 (477)
Q Consensus 200 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~-~~~g~~ig~~~~~~l~~~~g~~~~~~~~~~~ 278 (477)
.+|.|..+...+++|+..+..|.+..+++++..||+-+..+.++.... .++|--+|.+++|.+.+.+|-|..|.+.++.
T Consensus 456 L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giA 535 (618)
T KOG3762|consen 456 LQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIA 535 (618)
T ss_pred hcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHH
Confidence 677799999999999999999999999999999999999999997665 5699999999999999999999999999988
Q ss_pred HHHHHHHHHHh
Q 011781 279 GIAWFSGFKIL 289 (477)
Q Consensus 279 ~~~~~~~~~~~ 289 (477)
+++.++....+
T Consensus 536 cl~~l~~~~~i 546 (618)
T KOG3762|consen 536 CLVTLALFISI 546 (618)
T ss_pred HHHHHHHHHHh
Confidence 88776665554
No 219
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=98.95 E-value=6.1e-08 Score=91.32 Aligned_cols=278 Identities=11% Similarity=0.061 Sum_probs=163.7
Q ss_pred HHHHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhh----hcChhHHHHHH-HHH
Q 011781 115 LIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKI----FGGRKVLQTGV-LIW 189 (477)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr----~g~r~~~~~~~-~~~ 189 (477)
.++.+....+-..+++..-..+.+++.+++|++....+.+....-+...+.+++.|..+|| +||||.++... +..
T Consensus 33 ~li~v~~ia~Gvqf~wA~elsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i 112 (498)
T KOG0637|consen 33 KLISVASIAAGVQFGWALELSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLI 112 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHH
Confidence 3444444445555677777778888899999999999999999999999999999999995 89988877654 344
Q ss_pred HHHHHHHHHhhchH-----------------HHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhh-HHHHHHhhhhhH
Q 011781 190 SLATALLPLLAGFM-----------------PGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSR-AVSFVFGGLSFG 251 (477)
Q Consensus 190 ~~~~~~~~~~~~~~-----------------~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~-~~~~~~~~~~~g 251 (477)
+++.++++ .+.++ ..+++...+.-++.-......-+++.|...++++.+ +++.+..+..+|
T Consensus 113 ~~~l~Lig-~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avG 191 (498)
T KOG0637|consen 113 AVSLFLIG-YAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVG 191 (498)
T ss_pred HHHHhhhh-hHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhc
Confidence 44554443 22221 123444455556666778888999999997766666 999999999999
Q ss_pred HHHHHhhhHHhhccc--Ch---hHHHHHHHHHHHHHHHHHHHh-ccCCc-----CCCCCCCCcchhhhhhhhhhhhHHhh
Q 011781 252 SVAGLLLAPPIIENL--GW---ESVFYIFGLLGIAWFSGFKIL-QEGET-----SNGATLAPRSNYINMKKSLSASLEEM 320 (477)
Q Consensus 252 ~~ig~~~~~~l~~~~--g~---~~~~~~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (477)
+.+|-.+++++--+. .+ ...+..+..+-...+.-..+. .++.. .+++...+. ...+.+.......++.
T Consensus 192 nvLGY~~g~y~~~~~~~~Ft~~~~~~~~C~~~~~~~~~~v~L~~i~~~~~l~~~~~~~~s~~~-~~~~~~~~~~~~~~e~ 270 (498)
T KOG0637|consen 192 NVLGYALGSYLGLYKIFPFTLTTACDLYCANLKLCFFLEVTLLLIETSESLWYPQEKPLSPKG-TTARSKSSKLPFLLEI 270 (498)
T ss_pred ceeeeecccccCceEEeehHHHHHHHHHHHHHHHHHHHhhhhhheecccccccccccCCCCCc-ccccccccCcchHHHH
Confidence 999988887432111 01 111111111111111111111 11100 000000000 0000000000000010
Q ss_pred ccCCCCCCHHHH-hhcHHHHHHHHHHHHhHHHHHHHhhhhhHHHHH-hhCCchhh----------------hHHHHHHHH
Q 011781 321 GESLKDVPWKAI-FRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSE-ELSLNLTE----------------AAWVSILPP 382 (477)
Q Consensus 321 ~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~----------------~g~~~~~~~ 382 (477)
+..+ ...|.+|.+++...+...+...+..|...++-+ .++-++.. -.+-+.+..
T Consensus 271 --------fG~~~~mpr~m~~L~i~~lltW~a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~~~Y~~GV~~G~~GL~ins 342 (498)
T KOG0637|consen 271 --------FGALKVMPRPMRMLLIVTLLTWIAWFPFLLFDTDFMGREVYGGDPKADENSEAKKLYNAGVRMGCLGLMLNS 342 (498)
T ss_pred --------hchHhhCChhHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhCCCCCCCcchhHHHHHHhccccchHHHHHHH
Confidence 1112 234678888888888888888877777766643 34433321 124456666
Q ss_pred HHHHHHHHhhhhchhHHHhc
Q 011781 383 LASVLVTSIAAQFADNLIAT 402 (477)
Q Consensus 383 ~~~~~~~~~~g~l~dr~g~~ 402 (477)
+...+.+....++.+|+|.|
T Consensus 343 ~~lgi~S~~~~~l~~~~g~r 362 (498)
T KOG0637|consen 343 IVLGIYSLLVEKLSRKFGTR 362 (498)
T ss_pred HHHHHHHHHHHHHHHhcCcc
Confidence 77777788888999999865
No 220
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.93 E-value=7.5e-07 Score=84.68 Aligned_cols=305 Identities=15% Similarity=0.112 Sum_probs=167.5
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhhccchhhhHHHHhhhh
Q 011781 152 GLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARS 231 (477)
Q Consensus 152 g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~ 231 (477)
+.+.-+..+...+..+.+.++.+|+..+.-..+..++..++.++. .++++.+.-+++.++.+++.|..-....++.. .
T Consensus 62 ~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~v-a~~~~v~~~l~Gv~las~ssg~GE~tfL~lt~-~ 139 (402)
T PF02487_consen 62 GAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLV-AFSPSVWVRLLGVVLASLSSGLGEVTFLSLTH-F 139 (402)
T ss_pred hHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhhe-eeccchhHHHHHHHHHhhhhhhhHHHHHHHHH-h
Confidence 446667777888888888999999876555555556767777776 46677788888899999998888877777644 5
Q ss_pred cCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccC--hhHHHHHHHHHHHHHHHHHHHh-ccCCcCCCCCCCCcchhhh
Q 011781 232 IPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG--WESVFYIFGLLGIAWFSGFKIL-QEGETSNGATLAPRSNYIN 308 (477)
Q Consensus 232 ~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 308 (477)
+++ ...+-+.++.+.++++|+..--.+.+ .| .|..+++...+.++..+.++++ +.++........+.+...+
T Consensus 140 y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L~~~~~~~~~~~~~~~~~~~ 214 (402)
T PF02487_consen 140 YGK----SSLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLLPSPPTNRPYQESESEDEAE 214 (402)
T ss_pred cCc----cccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhhccccccCCCcccCCCCccc
Confidence 553 35677888889999999887766655 44 5777887777766655554444 3332221111111100000
Q ss_pred hhhhhhhhHHhh-ccCCCCCCHHHHh-hcHHHHHHHHHHHHhHHHHHHHhh-hhhHHHHH-hhCCchhhhHHHHHHHHHH
Q 011781 309 MKKSLSASLEEM-GESLKDVPWKAIF-RSKAVWAMIYAHFCGSWGHYTCLS-WLPTYFSE-ELSLNLTEAAWVSILPPLA 384 (477)
Q Consensus 309 ~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~-~~g~~~~~~g~~~~~~~~~ 384 (477)
+.....+.++. .+...+..+++-+ +-+.++..++-.++.++.++.++. ..+...-. ...-...+..+....+.++
T Consensus 215 -~~~~~~~~~~~~~~~~~~~~~~~k~~~~k~Ll~ymiPL~lVY~aEY~InqGv~~tl~fp~~~~~~r~~Y~~Y~~~YQ~G 293 (402)
T PF02487_consen 215 -DDLLESETSESKPDSSSKLSFKEKLKRLKPLLWYMIPLFLVYFAEYFINQGVAPTLLFPNSFFSPRDQYRWYQLLYQLG 293 (402)
T ss_pred -ccccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHhcCCccCCCHHHHHHHHHHHHHHH
Confidence 00000000000 0111122222222 223333344445555556555433 33333211 1122234455666667777
Q ss_pred HHHHHHhhhhchhHHHhcCcccceehhhhhHHh-hhhhHHHHhhhccc-CCCchHHHHHHHHHHHHhhhhhhhhhhHhhh
Q 011781 385 SVLVTSIAAQFADNLIATGVETTMVRKICQTIA-FLSPAVCMTLSSID-LGLPHWEIVGILTAGLALSSFALSGLYCTHQ 462 (477)
Q Consensus 385 ~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~-~~~~~~~~~l~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 462 (477)
-.++|--...+ |+ | +.++..+. .+-.++.++-.... .++.+...+.++..|...++.+......+..
T Consensus 294 VFISRSS~~~~--ri--r-------~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNtF~~I~~ 362 (402)
T PF02487_consen 294 VFISRSSLPFF--RI--R-------RLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNTFYRISE 362 (402)
T ss_pred Hhhhhcceeee--eh--h-------hHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHh
Confidence 77776544332 22 1 11111111 11111111111111 1233334456677788888888888888888
Q ss_pred ccCccchhhhhhh
Q 011781 463 DISPEYASILLYL 475 (477)
Q Consensus 463 ~~~p~~~g~~~gl 475 (477)
+.++++|..++|.
T Consensus 363 ~~~~~~REFslg~ 375 (402)
T PF02487_consen 363 EVPPEDREFSLGA 375 (402)
T ss_pred cCCHHHHHHHHHH
Confidence 8999999888775
No 221
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.91 E-value=4.8e-08 Score=95.76 Aligned_cols=155 Identities=15% Similarity=0.061 Sum_probs=107.6
Q ss_pred HHHHHhhhhHHHHhHHhhhhhh--CCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhh
Q 011781 123 FVICNMDKVNLSVAIIPMSHRF--GWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLA 200 (477)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~--g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~ 200 (477)
.++..........+++.+.++. +.+....+...+.+..+..++.++.+++.||+++|+++.+..++..+..++.. ..
T Consensus 241 ~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~-~~ 319 (410)
T TIGR00885 241 QFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSI-FA 319 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH-Hc
Confidence 3333333333445555554444 34444445567777788899999999999999999998888777777666664 34
Q ss_pred chHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhccc------ChhHHHHH
Q 011781 201 GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL------GWESVFYI 274 (477)
Q Consensus 201 ~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~------g~~~~~~~ 274 (477)
+... .....++.|++.+..+|...++..+..+++.+....++... .+|+.+.|++.|++.|.. +.+..|++
T Consensus 320 ~~~~-~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~--~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~ 396 (410)
T TIGR00885 320 GGHV-GLYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMA--IIGGGIVPPLQGFIIDMKEIAAAPAVNTSFIL 396 (410)
T ss_pred CChH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHH--HhccchHHHHHHHHHHHhcccccCccchHHHH
Confidence 4423 35677888899999999999999999985544333333333 399999999999999954 47778877
Q ss_pred HHHHHHH
Q 011781 275 FGLLGIA 281 (477)
Q Consensus 275 ~~~~~~~ 281 (477)
..++.+.
T Consensus 397 ~~~~~~~ 403 (410)
T TIGR00885 397 PLLCFAV 403 (410)
T ss_pred HHHHHHH
Confidence 5544433
No 222
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.90 E-value=8.8e-08 Score=95.75 Aligned_cols=174 Identities=14% Similarity=0.026 Sum_probs=126.5
Q ss_pred HHHHHHHHHHHHhhhhHHHHhHHhhhhh-hCCCc----chhhHHHHHHHHHHHHhhhhhhhhhhhhcC-----hhHH--H
Q 011781 116 IGTTSLAFVICNMDKVNLSVAIIPMSHR-FGWNS----SVAGLVQSSFFWGYALSQLPGGWLAKIFGG-----RKVL--Q 183 (477)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~----~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~-----r~~~--~ 183 (477)
+..+++..++...........++...++ .+.+. ...+++.+++.+..++.+++..++..|.+| +... .
T Consensus 274 ~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~ 353 (475)
T TIGR00924 274 YIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFT 353 (475)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHH
Confidence 3344444444445554555545544333 33322 226789999999999888886654444333 3333 6
Q ss_pred HHHHHHHHHHHHHHHh--------hchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHH
Q 011781 184 TGVLIWSLATALLPLL--------AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAG 255 (477)
Q Consensus 184 ~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig 255 (477)
+|.++.+++.+..+.. ..+++++++..++.++|+....|...+++.+..|++.||+++|++.....+|..++
T Consensus 354 ~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~ 433 (475)
T TIGR00924 354 LGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLG 433 (475)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 6777777777665421 35778899999999999999999999999999999999999999999999999999
Q ss_pred HhhhHHhhcccChhHHHHHHHHHHHHHHHHHHHh
Q 011781 256 LLLAPPIIENLGWESVFYIFGLLGIAWFSGFKIL 289 (477)
Q Consensus 256 ~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 289 (477)
+.+.....+..+|.+.|...+++.++..++.+++
T Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (475)
T TIGR00924 434 GYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALM 467 (475)
T ss_pred HHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHH
Confidence 9999888777789988888887777665555443
No 223
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.90 E-value=8.7e-12 Score=124.34 Aligned_cols=180 Identities=19% Similarity=0.113 Sum_probs=114.3
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHH
Q 011781 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLAT 193 (477)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 193 (477)
+.+..+.+..+....+......+.+.+.+..+.+.. -.......+...++.++...+.||+|||++++.+..+.+++.
T Consensus 253 ~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~ 330 (451)
T PF00083_consen 253 RLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICS 330 (451)
T ss_pred cccccccccccccccccccccccccccccccccccc--cccccccccccccccccccccccccccccccccccccccccc
Confidence 344334344434344445555667778888887776 122223344555677777899999999999998887777666
Q ss_pred HHHH---Hh-hch----HHHHHHHHHHHHhhcc-chhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhc
Q 011781 194 ALLP---LL-AGF----MPGLVLSRVLVGIGEG-VSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE 264 (477)
Q Consensus 194 ~~~~---~~-~~~----~~~~~~~~~l~g~~~~-~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~ 264 (477)
+.++ .. .++ -...++...+...+.+ +..+....+.+|.+|.+.|+++.++......++.++++.+...+.+
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~ 410 (451)
T PF00083_consen 331 LILGIIFFLGVSSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFN 410 (451)
T ss_pred cccccccccccccccccccccceeeeeccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 5553 11 111 0112222222222222 3446667888999999999999999999999999999999888887
Q ss_pred ccChhHHHHHHHHHHHH-HHHHHHHhccCCcC
Q 011781 265 NLGWESVFYIFGLLGIA-WFSGFKILQEGETS 295 (477)
Q Consensus 265 ~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 295 (477)
..+-...+++.+++.++ ..+..+++||++.+
T Consensus 411 ~~~~~~~~~i~~~~~~i~~i~~~~~lpET~g~ 442 (451)
T PF00083_consen 411 NLGGWGVFLIFAGVCLIAIIFVYFFLPETKGK 442 (451)
T ss_pred cccccccchhhHHHHHHHHhheeEEEeeCCCC
Confidence 77633455555544444 44455566776544
No 224
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.88 E-value=1.6e-08 Score=99.47 Aligned_cols=183 Identities=15% Similarity=0.066 Sum_probs=126.6
Q ss_pred CCCCchhHHHHHHHHHHHHHHHhhhhHHHHhHHhh-hhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcCh-----
Q 011781 106 WKNIPQRYKLIGTTSLAFVICNMDKVNLSVAIIPM-SHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGR----- 179 (477)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r----- 179 (477)
+++..++. .+..+.++.+........+..+.|.+ .+.+|++..+.|++.++..+...+..+++|.++||.-+|
T Consensus 251 ~~~i~ts~-~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t 329 (466)
T KOG2532|consen 251 YKAILTSP-PVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSET 329 (466)
T ss_pred HHHHHcCH-HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchH
Confidence 44333333 45566677778888888888888884 556899999999999999999999999999999987552
Q ss_pred ---hH-HHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhhc-cchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHH
Q 011781 180 ---KV-LQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGE-GVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVA 254 (477)
Q Consensus 180 ---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~-~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~i 254 (477)
|+ -.++....++..+++++.........+..+..+.+. |...+....-..+.. |++-+..+|+.+....+..++
T Consensus 330 ~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~~~a-pq~a~~l~g~~~~~~~~~~~~ 408 (466)
T KOG2532|consen 330 TVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYKNHQDIA-PQHAGFVMGIINFVGALAGFI 408 (466)
T ss_pred hHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHhhhhhcc-chHHHHHHHHHHHHHHHHHHH
Confidence 22 234444555555555444432221222222222222 333333333333434 488999999999999999999
Q ss_pred HHhhhHHhhcc---cChhHHHHHHHHHHHHHHHHHHHhc
Q 011781 255 GLLLAPPIIEN---LGWESVFYIFGLLGIAWFSGFKILQ 290 (477)
Q Consensus 255 g~~~~~~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~ 290 (477)
+|.+.|.+.+. ..|+++|++.+++.++..+++.++-
T Consensus 409 ~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f~ 447 (466)
T KOG2532|consen 409 APLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFFG 447 (466)
T ss_pred HHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEee
Confidence 99999999842 3699999999999888776666553
No 225
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.87 E-value=7.1e-08 Score=94.38 Aligned_cols=135 Identities=15% Similarity=0.016 Sum_probs=97.8
Q ss_pred HHhHHh-hhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHh--hchHHHHHHHH
Q 011781 134 SVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLL--AGFMPGLVLSR 210 (477)
Q Consensus 134 ~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 210 (477)
....+. +.+.+|.++.+.+++.....++..++.++.+++.||++++........+.+......... ..+.+.+++..
T Consensus 227 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (394)
T PRK11652 227 EACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPA 306 (394)
T ss_pred HHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHH
Confidence 333444 444589999999999999999999999999999999984333322222222111111111 22345667778
Q ss_pred HHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChh
Q 011781 211 VLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWE 269 (477)
Q Consensus 211 ~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~ 269 (477)
++.|++.+...|...++..+..| ++++.+.++.+....+|..+++.+++.+.....+.
T Consensus 307 ~~~~~g~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~ 364 (394)
T PRK11652 307 ALFFFGAGMLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLPQTGQFS 364 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHccCCchHH
Confidence 88999999999999999999887 68899999999999999999999999887653333
No 226
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.85 E-value=9.1e-08 Score=89.06 Aligned_cols=166 Identities=19% Similarity=0.170 Sum_probs=128.2
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHhHHhhhhh-hCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHH
Q 011781 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSHR-FGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLA 192 (477)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 192 (477)
+.+....++.|+..........+++.+..+ .|.+..+.+...+.+..+.++|.++..++..|+...|.+....++..+.
T Consensus 236 ~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill 315 (422)
T COG0738 236 KHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILL 315 (422)
T ss_pred hHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 334445556666666677777777776666 8899999999999999999999999999999999999988876655444
Q ss_pred HHHHHHhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHH
Q 011781 193 TALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVF 272 (477)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~ 272 (477)
++.. .+.++ ...+...++.|+..+..+|...+...+..+ +.....|..-....+|+++-|.+.|++.|..|-...+
T Consensus 316 ~~~~-~l~~g-~v~~~~l~~ig~F~simfPTIfslal~~l~--~~ts~~s~~l~maivGGAiiP~l~G~i~d~~g~~~~~ 391 (422)
T COG0738 316 LLAV-ALIGG-VVALYALFLIGLFNSIMFPTIFSLALKNLG--EHTSVGSGLLVMAIVGGAIIPPLQGVIADMFGIQLTF 391 (422)
T ss_pred HHHH-HHhcC-hHHHHHHHHHHHHhHHHHHHHHHHHHhccC--ccccccceeeeeheecchHHHHHHHHHHHhhhhHHHH
Confidence 4444 35555 334556788999999999999999999998 3344455566677889999999999999999988887
Q ss_pred HHHHHHHHHHH
Q 011781 273 YIFGLLGIAWF 283 (477)
Q Consensus 273 ~~~~~~~~~~~ 283 (477)
.+...++.+..
T Consensus 392 ~~~pllc~lyV 402 (422)
T COG0738 392 LIVPLLCYLYV 402 (422)
T ss_pred HHHHHHHHHHH
Confidence 75555555544
No 227
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.83 E-value=2.2e-08 Score=99.75 Aligned_cols=138 Identities=14% Similarity=0.099 Sum_probs=114.2
Q ss_pred hhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhh---------chHHHHHHHHH
Q 011781 141 SHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLA---------GFMPGLVLSRV 211 (477)
Q Consensus 141 ~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~ 211 (477)
.+.+|.++.++|++.....++.+++....+++.+|++.|+++.++.++.+++.+...... ++.+.++...+
T Consensus 280 ~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~ 359 (468)
T TIGR00788 280 TQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSI 359 (468)
T ss_pred cccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhH
Confidence 357899999999999999999999999999999999999999999888877664432111 22234556678
Q ss_pred HHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccC-----hhHHHHHHHHH
Q 011781 212 LVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG-----WESVFYIFGLL 278 (477)
Q Consensus 212 l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g-----~~~~~~~~~~~ 278 (477)
+.+++.+....+...++.+..|++.+|..+++..+..++|..+++.+++.+.+..| ++..+....+.
T Consensus 360 l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i~ 431 (468)
T TIGR00788 360 IAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLLILGH 431 (468)
T ss_pred HHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHH
Confidence 88888888888999999999999999999999999999999999999999998877 55544443333
No 228
>PRK11462 putative transporter; Provisional
Probab=98.81 E-value=9.1e-08 Score=95.29 Aligned_cols=144 Identities=7% Similarity=-0.041 Sum_probs=93.1
Q ss_pred HHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhc-hH
Q 011781 125 ICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAG-FM 203 (477)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~-~~ 203 (477)
+.............++.+...-++...+.+.+.+.++.+++.+++++++||+|+|+.+..+..+..+..++..+... +.
T Consensus 239 ~~~~~~~~~~~~~~y~~~y~~g~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (460)
T PRK11462 239 FNILAVCVRGGAMMYYVTWILGTPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQAS 318 (460)
T ss_pred HHHHHHHHHHhHhhhhhhhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHH
Confidence 33333333333344433333334445566777888888999999999999999998877554444333333322222 22
Q ss_pred HHHHHHHHHHHhhccchhhhHHHHhhhhcC-------CcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccCh
Q 011781 204 PGLVLSRVLVGIGEGVSPSAATDLIARSIP-------LEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGW 268 (477)
Q Consensus 204 ~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~-------~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~ 268 (477)
..+++..++.|++.+...+...++++|..+ .+..|..++.......+|..+|+.++|.+.+..|+
T Consensus 319 ~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 319 ITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 334555567788777777777788888765 33345556777788889999999999988765554
No 229
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.80 E-value=1.9e-08 Score=92.93 Aligned_cols=166 Identities=16% Similarity=0.180 Sum_probs=126.8
Q ss_pred HHHhhhhHHHHhHHh-hhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhH--HHHHHHHHHHHHHHHHHhhc
Q 011781 125 ICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKV--LQTGVLIWSLATALLPLLAG 201 (477)
Q Consensus 125 ~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~--~~~~~~~~~~~~~~~~~~~~ 201 (477)
.........-+.++. +.+.+..+..+.|+.+--..+.+.++..+.|.++||++.-++ ...+++..++...... +++
T Consensus 281 ~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP-~~~ 359 (464)
T KOG3764|consen 281 FSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIP-FAT 359 (464)
T ss_pred hccchHHHhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhH-hhh
Confidence 344556666666666 667788666699999999999999999999999999994333 3344455554444443 567
Q ss_pred hHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCc------chhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHHHH
Q 011781 202 FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLE------ERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIF 275 (477)
Q Consensus 202 ~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~------~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~~ 275 (477)
++..+++-++..+++.+..............+.+ ..|...++...++.+|.++||.++|.+.+..|++|...+.
T Consensus 360 ~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl~~ii 439 (464)
T KOG3764|consen 360 SIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTII 439 (464)
T ss_pred hHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehhHHHHHHHH
Confidence 7788888888888887777766666666555432 4578999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcc
Q 011781 276 GLLGIAWFSGFKILQE 291 (477)
Q Consensus 276 ~~~~~~~~~~~~~~~~ 291 (477)
++..++...+..+++.
T Consensus 440 g~~n~iyapvl~ll~~ 455 (464)
T KOG3764|consen 440 GILNLIYAPVLLLLRI 455 (464)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9998887666655543
No 230
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.80 E-value=4.6e-08 Score=94.40 Aligned_cols=154 Identities=16% Similarity=0.139 Sum_probs=121.2
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHhHHhhh-hhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHH
Q 011781 114 KLIGTTSLAFVICNMDKVNLSVAIIPMS-HRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLA 192 (477)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 192 (477)
+.+...++..++......+.+....++. ..+|.++....+.......+.+++.+++.++.+|+|+|+++.++.++..++
T Consensus 236 rp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~ 315 (467)
T COG2211 236 RPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVG 315 (467)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHH
Confidence 3344444566666666677777666643 446777777778888888888888999999999999999999999999998
Q ss_pred HHHHHHhh-chHHHHHHHHHHHHhhccchhhhHHHHhhhhcC-------CcchhhHHHHHHhhhhhHHHHHHhhhHHhhc
Q 011781 193 TALLPLLA-GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIP-------LEERSRAVSFVFGGLSFGSVAGLLLAPPIIE 264 (477)
Q Consensus 193 ~~~~~~~~-~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~-------~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~ 264 (477)
.++..+.. ++.+.+++..++.+++.+...+...++++|..+ .+.-|...+......=+|.+++..+.|++.+
T Consensus 316 ~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~ 395 (467)
T COG2211 316 YLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILG 395 (467)
T ss_pred HHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88775444 456778888899999999999999999998874 2334777888888888999999999998887
Q ss_pred ccC
Q 011781 265 NLG 267 (477)
Q Consensus 265 ~~g 267 (477)
..|
T Consensus 396 ~~G 398 (467)
T COG2211 396 AIG 398 (467)
T ss_pred HcC
Confidence 655
No 231
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.77 E-value=3.9e-08 Score=95.09 Aligned_cols=121 Identities=17% Similarity=0.113 Sum_probs=87.9
Q ss_pred hhHHHHhHHh-hhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhc---hHHH
Q 011781 130 KVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAG---FMPG 205 (477)
Q Consensus 130 ~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~---~~~~ 205 (477)
........|. +.+.+|.++.+.+++.++..+...++.+++|++.||+|+|+.+..+..+...+..++..... +.+.
T Consensus 241 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (366)
T TIGR00886 241 FLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLVSPLSLAV 320 (366)
T ss_pred HHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCCCcchHHH
Confidence 3334444554 45668999999999999999999999999999999999998877776665555444432222 4444
Q ss_pred HHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhH
Q 011781 206 LVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFG 251 (477)
Q Consensus 206 ~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g 251 (477)
.++..++.+++.+...+...+.+.+..| +++|.++|+.+...++|
T Consensus 321 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 321 FIVLFVALFFFSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred HHHHHHHHHHHhccccchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 4555555555666666667777888876 79999999998887765
No 232
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.77 E-value=4e-07 Score=85.24 Aligned_cols=160 Identities=33% Similarity=0.484 Sum_probs=124.4
Q ss_pred HHHHHhhhhHHHHhHHhhhhhhCCCc--chhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhh
Q 011781 123 FVICNMDKVNLSVAIIPMSHRFGWNS--SVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLA 200 (477)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~g~s~--~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~ 200 (477)
.+.............+.+..+++.+. ...++..+.+.++..++.++.|.+.||+|||+.+..+.....++.++.....
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~ 90 (338)
T COG0477 11 ALLLGLDLGLLSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAP 90 (338)
T ss_pred HHHHHHhcchHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCc
Confidence 33444666666777788878777666 4789999999999999999999999999999888887765444444443333
Q ss_pred c-hHHHHHHHHHHHHhhccchhhhHHHHhhhhcCC-cchhhHHHHHHh-hhhhHHHHHHhhhHHhhcc--cChhHHHHHH
Q 011781 201 G-FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPL-EERSRAVSFVFG-GLSFGSVAGLLLAPPIIEN--LGWESVFYIF 275 (477)
Q Consensus 201 ~-~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~-~~~~g~~ig~~~~~~l~~~--~g~~~~~~~~ 275 (477)
. ..+.+++.|++.|++.+...+...+++.+..++ ++|+...+.... ...+|..++|.+++.+... .+|++.|.+.
T Consensus 91 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (338)
T COG0477 91 NVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLA 170 (338)
T ss_pred cchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHH
Confidence 3 468889999999999999999999999999987 678999998888 5888889999888777654 5799866666
Q ss_pred HHHHHHH
Q 011781 276 GLLGIAW 282 (477)
Q Consensus 276 ~~~~~~~ 282 (477)
.......
T Consensus 171 ~~~~~~~ 177 (338)
T COG0477 171 ALLGLLL 177 (338)
T ss_pred HHHHHHH
Confidence 5555433
No 233
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=98.75 E-value=3e-06 Score=77.99 Aligned_cols=263 Identities=13% Similarity=0.079 Sum_probs=156.1
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhh-----hhcChhHHHHH-H
Q 011781 113 YKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAK-----IFGGRKVLQTG-V 186 (477)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d-----r~g~r~~~~~~-~ 186 (477)
++-+..+...+.+++.-.+... .+|.+.+.-|.|-++.+....++. . ...-++|.++.| |+||||..++- .
T Consensus 30 ~~~illLl~LYllQGiP~GL~~-~iP~lL~ak~vSyt~~a~fS~ay~-P-~sLKllWaPiVDs~y~k~~GrrksWvvp~q 106 (510)
T KOG3574|consen 30 RSSILLLLFLYLLQGIPLGLIG-AIPLLLQAKGVSYTSQAIFSFAYW-P-FSLKLLWAPIVDSVYSKRFGRRKSWVVPCQ 106 (510)
T ss_pred hhhHHHHHHHHHHcCCchhHhh-hhHHHhcCCCcchhhhhhhhhhhh-H-HHHHHHHHhhhHHHHHHhhccccceeeehH
Confidence 3455566667778888777777 899988888888877665433322 1 134568889999 99999876542 2
Q ss_pred HHHHHHHHHHHHhh----------chHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHH
Q 011781 187 LIWSLATALLPLLA----------GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGL 256 (477)
Q Consensus 187 ~~~~~~~~~~~~~~----------~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~ 256 (477)
.+.+..+..++... ++...+....++.-+..+.-..+...+.-.+..+++.|.+......+...|.+++.
T Consensus 107 ~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~ 186 (510)
T KOG3574|consen 107 YLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGN 186 (510)
T ss_pred HHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhc
Confidence 33333333332221 12222333446666777778888888888888889988888777777777777765
Q ss_pred hhhHHhhc-------ccCh---------hHHHHHHHHHHHHHHHHHHHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhh
Q 011781 257 LLAPPIIE-------NLGW---------ESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEM 320 (477)
Q Consensus 257 ~~~~~l~~-------~~g~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (477)
.+.-.+.. ..+| ...+++.+.+.++.-.+..+..++++... . ++......+.
T Consensus 187 ~ifLaL~s~dF~N~y~rs~P~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~~~~-~---~e~~~~i~~~-------- 254 (510)
T KOG3574|consen 187 VVFLALESPDFCNTYLRSIPLDQGFITLAGYLWFWGALFIVATTLVALLKKENDESV-D---EELELGIHES-------- 254 (510)
T ss_pred ceeeEecChhhhhHHHhcCcCccceEEhhHHHHHHHHHHHHHHHHHHHhcCCCchhh-h---hhhhcCHHHH--------
Confidence 54433322 0112 23445555555555555545444332221 1 1100000000
Q ss_pred ccCCCCCCHHHHhhcHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhch
Q 011781 321 GESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFA 396 (477)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~ 396 (477)
..-++++++-|.+..++......-.++.+-....+.-+.| .|++....+++.....-..++.....|+++
T Consensus 255 -----yk~l~~vLklk~v~~la~i~lt~K~gf~a~da~t~LkLle-~Gv~ke~Lal~~v~~~plqI~l~~~~gk~t 324 (510)
T KOG3574|consen 255 -----YKLLRDVLKLKSVRWLAGILLTGKLGFQAADALTSLKLLE-HGVPKEELALIAVPLVPLQIALPLYIGKWT 324 (510)
T ss_pred -----HHHHHHHHcCccHHHHHHHHHHHHHHhhhhhhccchHHHH-cCCChhHheeeeeehhhHHHhhhhhheeec
Confidence 0013466677777777777777777888888888888877 699988877665333334444444444443
No 234
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.75 E-value=4.7e-07 Score=85.11 Aligned_cols=174 Identities=19% Similarity=0.138 Sum_probs=131.3
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhh-hhcChhHHHHHHHHHHH
Q 011781 113 YKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAK-IFGGRKVLQTGVLIWSL 191 (477)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d-r~g~r~~~~~~~~~~~~ 191 (477)
++++..+++..+...+...+.- |+=.+.||++..+...+.+....+..++-...|++.. |.++++.-.+++.+..+
T Consensus 211 ~~f~~fl~l~t~a~~~QD~iLE---Pygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~ 287 (403)
T PF03209_consen 211 RRFFVFLFLGTLAFFMQDVILE---PYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGAL 287 (403)
T ss_pred hHHHHHHHHHHHHHHhhHHHcC---CchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHH
Confidence 3455455444443333333222 3345668999999999999999999999999998887 67777777777666655
Q ss_pred HHHHHH--HhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcc----
Q 011781 192 ATALLP--LLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN---- 265 (477)
Q Consensus 192 ~~~~~~--~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~---- 265 (477)
++.++. ....+.+.+....++.|++.|.+.....+.+.+...+++.|..+|.+.....++..+|..++|.+.|.
T Consensus 288 ~f~lii~a~~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~ 367 (403)
T PF03209_consen 288 AFALIILAGPLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRAL 367 (403)
T ss_pred HHHHHHHHHhcccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 554432 23345678889999999999999999999999999999999999999999999999999999988753
Q ss_pred ------cChhHHHHHHHHHHHHHHHHHHHh
Q 011781 266 ------LGWESVFYIFGLLGIAWFSGFKIL 289 (477)
Q Consensus 266 ------~g~~~~~~~~~~~~~~~~~~~~~~ 289 (477)
.+|..+|.+.+++.++.+.+...+
T Consensus 368 ~~~~~~~aY~~VF~lEa~ll~~a~~ll~~l 397 (403)
T PF03209_consen 368 FGNSPALAYGVVFALEAVLLLAALVLLGRL 397 (403)
T ss_pred ccCCcchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 246677777777766666555443
No 235
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.70 E-value=3.6e-07 Score=89.84 Aligned_cols=159 Identities=12% Similarity=-0.012 Sum_probs=101.8
Q ss_pred HHHHhhhhHHHHhHHhh-hhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHH----H
Q 011781 124 VICNMDKVNLSVAIIPM-SHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLP----L 198 (477)
Q Consensus 124 ~~~~~~~~~~~~~~~~~-~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~----~ 198 (477)
++.......+....|.+ .+.+|.++.+.++.......+..++..+.+++.++..+++.+.....+..++.++.. .
T Consensus 228 ~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~ 307 (413)
T PRK15403 228 SLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLL 307 (413)
T ss_pred HHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444555566764 455699999999998888888888888888877554444433222222222222221 1
Q ss_pred hhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHHHHHHH
Q 011781 199 LAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLL 278 (477)
Q Consensus 199 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~~~~~ 278 (477)
..++++..++..++.++|.+...|......-. -....+|++.++.+.....+..+++.+++++.++ +-++.|...+++
T Consensus 308 ~~~~~~~~~~~~~l~~~G~~~~~p~~~~~al~-~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~ 385 (413)
T PRK15403 308 WPHVWLWSVLGTSLYAFGIGLIFPTLFRFTLF-SNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFN-GGRLPFHLLAVV 385 (413)
T ss_pred ccccHHHHHHHHHHHHHHHHHHhHHHHHHHhc-cCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCchHHHHHHHH
Confidence 23333345677888888888887777753321 1223579999999999999999999999988766 566677666655
Q ss_pred HHHHHH
Q 011781 279 GIAWFS 284 (477)
Q Consensus 279 ~~~~~~ 284 (477)
..+...
T Consensus 386 ~~~~~~ 391 (413)
T PRK15403 386 AGVIVV 391 (413)
T ss_pred HHHHHH
Confidence 544433
No 236
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.68 E-value=1.8e-08 Score=94.89 Aligned_cols=184 Identities=13% Similarity=0.039 Sum_probs=132.7
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhH--------HHH-HHHHHHHHhhhhhhhhhhhhcChhHHHH
Q 011781 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGL--------VQS-SFFWGYALSQLPGGWLAKIFGGRKVLQT 184 (477)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~--------~~~-~~~~~~~~~~~~~g~l~dr~g~r~~~~~ 184 (477)
+.++..+...|+.-......+.....+.+..|+.+.+... ... +...+++.|-++...++|++|||++.+.
T Consensus 304 ~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~ 383 (538)
T KOG0252|consen 304 KHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLM 383 (538)
T ss_pred HHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHh
Confidence 4555666677777677777777777888888876655444 111 1222233366677889999999999999
Q ss_pred HHHHHHHHHHHHHHhhch----HHHHHHHHHHHHh-hccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhh
Q 011781 185 GVLIWSLATALLPLLAGF----MPGLVLSRVLVGI-GEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLA 259 (477)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~g~-~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~ 259 (477)
+.+++++..+.++ .+.+ ...++++..+..+ +.-+.......+-+|.+|.+-|+...|+..+..-+|+++|....
T Consensus 384 GF~~~~i~~~~~~-~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F 462 (538)
T KOG0252|consen 384 GFFIMTIFFFVIA-GPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGF 462 (538)
T ss_pred hHHHHHHHHHHHc-CCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHh
Confidence 9999988887775 3332 1122222222222 22233445556778999999999999999999999999999999
Q ss_pred HHhhc-----ccChhHHHHHHHHHHHHHHHHHHHhccCCcCCCC
Q 011781 260 PPIIE-----NLGWESVFYIFGLLGIAWFSGFKILQEGETSNGA 298 (477)
Q Consensus 260 ~~l~~-----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (477)
.++.+ ..|.++++++.+.+.++..+..++++|++.+..+
T Consensus 463 ~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~pEtk~~~le 506 (538)
T KOG0252|consen 463 LYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLIPETKGKSLE 506 (538)
T ss_pred hHhhhccCCccccchHHHHHHHHHHHHhHheeEEeecccccCHH
Confidence 99998 7799999999999999999998889876655443
No 237
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=98.66 E-value=2.2e-07 Score=84.25 Aligned_cols=296 Identities=12% Similarity=0.037 Sum_probs=185.7
Q ss_pred HhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHH
Q 011781 164 LSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSF 243 (477)
Q Consensus 164 ~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~ 243 (477)
+.-++.=.+.|....|++++.-.+.......++ .+.++.+.+-+.-++.|... ....+.++++-...+|+++.++.|.
T Consensus 57 v~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~l-v~g~sV~~mQvlE~FyG~~t-AaEIAYysYIYs~Vd~~~Yqrvt~y 134 (433)
T KOG3810|consen 57 VGLVPVFLLTDYLRYKPVVVLQALSGVPVWIML-VFGPSVKAMQVLEFFYGPAT-AAEIAYYSYIYSKVDPEMYKRVTGY 134 (433)
T ss_pred HHHHHHHHHhhhhhcceeeeeeccchhHHHHHH-HhcCCchheeeehhhcChHH-HHHHhhhheeeeecCHHHHHHHHHH
Confidence 333444467898888888776544443444444 46777788888888888874 3456778888888899999999999
Q ss_pred HHhhhhhHHHHHHhhhHHhhcc--cChhHHHHHHHHHHHHHHHHHHHhccCCcCCCCCCCCcchhhhhhhhhhhhHHhhc
Q 011781 244 VFGGLSFGSVAGLLLAPPIIEN--LGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMG 321 (477)
Q Consensus 244 ~~~~~~~g~~ig~~~~~~l~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (477)
..+..-.|...|..++-.+... .++...=++......+..+...++|+.++..-....+++... .+.++..
T Consensus 135 ~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fLP~v~rSl~f~~~~~~~~v-------~~~e~~~ 207 (433)
T KOG3810|consen 135 CRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFLPRVKRSLYFHRLEDKISV-------GDLEEMN 207 (433)
T ss_pred hHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhCCCCchhhhhhccccccee-------ccchhcC
Confidence 9999999999999888887754 334444444444444555666667665532211111111000 0000000
Q ss_pred cCCC------------CCCHHHHhhcHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHhh-CCchhhhHHHHHHHHHHHHHH
Q 011781 322 ESLK------------DVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEEL-SLNLTEAAWVSILPPLASVLV 388 (477)
Q Consensus 322 ~~~~------------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~g~~~~~~~~~~~~~ 388 (477)
.+.+ ...+....+||.+....+-..+..++++....+....-.+.- +-....-|..-++..+.+.++
T Consensus 208 ~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~~~~~~vyNG~veAv~tlLGa~~ 287 (433)
T KOG3810|consen 208 PQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQILWKEVAPNPANVYNGAVEAVSTLLGAIA 287 (433)
T ss_pred ccchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHHHHHHhhCCCchhhhcCHHHHHHHHHHHHH
Confidence 0000 112445567888877777777777888887777777765532 111223366677778888888
Q ss_pred HHhhhhchhHHHhcCcccceehhhhhHHhhhhhHHHHhhhcccCCCchHHHHHHHHHHHHhhhhhhhhhhHhhhccCccc
Q 011781 389 TSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEY 468 (477)
Q Consensus 389 ~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~ 468 (477)
.++.|.+.-++.++ +..++.++.+.-+.+++++.. .+..++..+..+++..............+..++..|.
T Consensus 288 ~~~~g~l~i~w~r~-------g~~ll~~~s~~~agllf~m~~-t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~ 359 (433)
T KOG3810|consen 288 ALAAGYLNINWNRW-------GDLLLAVGSAVQAGLLFIMAQ-TQHIWVCYAGYVLFRVIYQLTITIATFQIARNLSSEL 359 (433)
T ss_pred HHHHHheeeccchh-------hHHHHHHHHHHhhhhhhhhhc-ccceehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhh
Confidence 89999887666544 345555554444444444433 3445556666777777777666667777778888888
Q ss_pred hhhhhhhc
Q 011781 469 ASILLYLE 476 (477)
Q Consensus 469 ~g~~~gl~ 476 (477)
-|-++|++
T Consensus 360 ~gLvFGiN 367 (433)
T KOG3810|consen 360 FGLVFGIN 367 (433)
T ss_pred heeeeehH
Confidence 88888864
No 238
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.64 E-value=1.1e-06 Score=88.47 Aligned_cols=136 Identities=16% Similarity=0.057 Sum_probs=101.6
Q ss_pred hhHHHHHHHHHHHHhhhhh----hhhhhhhcChhHHHHHHHHHHHHHHHHHHhhch--------HHHHHHHHHHHHhhcc
Q 011781 151 AGLVQSSFFWGYALSQLPG----GWLAKIFGGRKVLQTGVLIWSLATALLPLLAGF--------MPGLVLSRVLVGIGEG 218 (477)
Q Consensus 151 ~g~~~~~~~~~~~~~~~~~----g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~l~g~~~~ 218 (477)
.+++.++..+..++..++. +++.+|++..+.+.++.++.+++++++...... .+++++..++.|+|+.
T Consensus 318 ~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~ 397 (500)
T PRK09584 318 PEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGEL 397 (500)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHH
Confidence 5677777887777776666 555556666678888889988888776433221 3578889999999999
Q ss_pred chhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhc----------ccChhHHHHHHHHHHHHHHHHH
Q 011781 219 VSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE----------NLGWESVFYIFGLLGIAWFSGF 286 (477)
Q Consensus 219 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~----------~~g~~~~~~~~~~~~~~~~~~~ 286 (477)
...|...+++.+..|++.||+++|.+.....+|..++..+.+.... ..++.+.|...++++++..++.
T Consensus 398 ~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~ 475 (500)
T PRK09584 398 MISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLM 475 (500)
T ss_pred HHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999888888888777777653221 1136778887777665544333
No 239
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.61 E-value=1.7e-07 Score=94.83 Aligned_cols=183 Identities=19% Similarity=0.109 Sum_probs=123.1
Q ss_pred hHHHHHHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHH
Q 011781 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL 191 (477)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 191 (477)
+++....+.+..+.+..+......+.+.+.+..|.+... .+...+..+...++..+...+.||+|||+.++.+...+.+
T Consensus 293 ~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~ 371 (513)
T KOG0254|consen 293 RKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSI 371 (513)
T ss_pred HHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHH
Confidence 345555666777777777788888888888888877554 5555566666777778889999999999999999998888
Q ss_pred HHHHHHHhhch------------HHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhh
Q 011781 192 ATALLPLLAGF------------MPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLA 259 (477)
Q Consensus 192 ~~~~~~~~~~~------------~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~ 259 (477)
+.++++..... +..+....+.......+..+....+.+|.+|.+-|+++.++......+...+-....
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~ 451 (513)
T KOG0254|consen 372 CLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFF 451 (513)
T ss_pred HHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 88766533111 112222222233333444566667889999999999999998888887776665555
Q ss_pred HHhhcccChhHHHHHHHHHHHHHHH--HHHHhccCCcC
Q 011781 260 PPIIENLGWESVFYIFGLLGIAWFS--GFKILQEGETS 295 (477)
Q Consensus 260 ~~l~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 295 (477)
..+.+..++...|...+.++.+... ..+++||++..
T Consensus 452 ~~~~~~~~~~~~f~~f~~~~~~~~~~fv~~~~pETkg~ 489 (513)
T KOG0254|consen 452 PFITEALGIGGTFGYFGGICLLSLIIFVFFFVPETKGL 489 (513)
T ss_pred HHHHHhccccchHHHHHHHHHHHHHHHheEEcccCCCC
Confidence 5555554445555555555544443 44555655443
No 240
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.60 E-value=1.5e-06 Score=85.66 Aligned_cols=179 Identities=9% Similarity=-0.022 Sum_probs=129.2
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHhHHhh-hh-hhCCCcc------h----hhHHHHHHHHHHHHhhhhhhhhhhhhcC-h
Q 011781 113 YKLIGTTSLAFVICNMDKVNLSVAIIPM-SH-RFGWNSS------V----AGLVQSSFFWGYALSQLPGGWLAKIFGG-R 179 (477)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~g~s~~------~----~g~~~~~~~~~~~~~~~~~g~l~dr~g~-r 179 (477)
.+.+..+++.+++..++...+..+...+ .+ .++.++. + -.+...++.+...+.+++..++.+|+|+ |
T Consensus 257 P~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k 336 (477)
T TIGR01301 257 PRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGK 336 (477)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccch
Confidence 3556677777777777777766665553 32 2343221 1 2344455666666777788889999985 7
Q ss_pred hHHHHHHHHHHHHHHHHHHhhc---h-----------------HHHHHHHHHHHHhhccchhhhHHHHhhhhcCC--cch
Q 011781 180 KVLQTGVLIWSLATALLPLLAG---F-----------------MPGLVLSRVLVGIGEGVSPSAATDLIARSIPL--EER 237 (477)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~---~-----------------~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~--~~r 237 (477)
++..++.++.+++.....+... + .+..++...+.|+..+..+..-++++++..++ ++.
T Consensus 337 ~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~ 416 (477)
T TIGR01301 337 RLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLGAGQ 416 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCC
Confidence 7778887877777766643332 1 26677888999999999999999999999984 456
Q ss_pred hhHHHHHHhhhhhHHHHHHhhhHHhhcccC--hhHHHHHHHHHHHHHHHHHHHhcc
Q 011781 238 SRAVSFVFGGLSFGSVAGLLLAPPIIENLG--WESVFYIFGLLGIAWFSGFKILQE 291 (477)
Q Consensus 238 ~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~ 291 (477)
|..+|+.+.+..+.+++..+..|.+.+.+| -.+.+.+.++..++..+..+++.+
T Consensus 417 G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~ 472 (477)
T TIGR01301 417 GLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLP 472 (477)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999998888665554 566788888888777666655543
No 241
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.53 E-value=2.8e-06 Score=85.09 Aligned_cols=138 Identities=14% Similarity=0.040 Sum_probs=103.9
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhhcChhH-------HHHHHHHHHHHHHHHH-----Hh----hchHHHHHHHHHHHH
Q 011781 151 AGLVQSSFFWGYALSQLPGGWLAKIFGGRKV-------LQTGVLIWSLATALLP-----LL----AGFMPGLVLSRVLVG 214 (477)
Q Consensus 151 ~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~-------~~~~~~~~~~~~~~~~-----~~----~~~~~~~~~~~~l~g 214 (477)
.+++.+++.+..++..++.+++.||+++|+. +.+|.++.+++.+... .. ..+.+.++...++.|
T Consensus 311 ~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g 390 (489)
T PRK10207 311 PVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQS 390 (489)
T ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHH
Confidence 3556667777788889999999999999873 6677676666654321 11 123566778899999
Q ss_pred hhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhc----------ccChhHHHHHHHHHHHHHHH
Q 011781 215 IGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE----------NLGWESVFYIFGLLGIAWFS 284 (477)
Q Consensus 215 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~----------~~g~~~~~~~~~~~~~~~~~ 284 (477)
+|++...+...+++.+..|++.++.++|++....++|..+|..++..... .-.+.+.|...++..++..+
T Consensus 391 ~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v 470 (489)
T PRK10207 391 LGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAV 470 (489)
T ss_pred HHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999988875531 11245677777766665554
Q ss_pred HHHH
Q 011781 285 GFKI 288 (477)
Q Consensus 285 ~~~~ 288 (477)
+.+.
T Consensus 471 ~~~~ 474 (489)
T PRK10207 471 VMAL 474 (489)
T ss_pred HHHH
Confidence 4444
No 242
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.51 E-value=7.1e-06 Score=67.67 Aligned_cols=110 Identities=15% Similarity=0.118 Sum_probs=92.2
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhhccchhhhHHHHhhhh
Q 011781 152 GLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARS 231 (477)
Q Consensus 152 g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~ 231 (477)
-.-.++......+.+++.+.+.+++|.|+.++++.+.+.+-.... +-++.+.++...++.|++.+..+.+...++.+.
T Consensus 40 ~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~--~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~ 117 (156)
T PF05978_consen 40 YYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF--FYPNSYTLYPASALLGFGAALLWTAQGTYLTSY 117 (156)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH--HhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHc
Confidence 334556666777888889999999999999999988887554443 445568889999999999999999999999999
Q ss_pred cCCcchhhHHHHHHhhhhhHHHHHHhhhHHhh
Q 011781 232 IPLEERSRAVSFVFGGLSFGSVAGLLLAPPII 263 (477)
Q Consensus 232 ~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~ 263 (477)
.+++++++..++.......+.++|.++.-.+.
T Consensus 118 s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 118 STEETIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred CCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998888776554
No 243
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.48 E-value=3.8e-07 Score=90.04 Aligned_cols=162 Identities=17% Similarity=0.242 Sum_probs=107.1
Q ss_pred HHHHHHHHHHHHhhhhHHHHhHHhhhhh-hCCCcchhhHHHHHHHHHHHHhhhhhhhhhhh----hcChhHHHHHHHHHH
Q 011781 116 IGTTSLAFVICNMDKVNLSVAIIPMSHR-FGWNSSVAGLVQSSFFWGYALSQLPGGWLAKI----FGGRKVLQTGVLIWS 190 (477)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr----~g~r~~~~~~~~~~~ 190 (477)
++..+++.++.....+.+..++|.+.++ .|+|..+.+.+...+.++.+++.+++|.++|| ..+|........++.
T Consensus 275 vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~ 354 (495)
T KOG2533|consen 275 VWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYA 354 (495)
T ss_pred HHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 3456667777778888889999998777 66999999999999999999999999999999 667777666666655
Q ss_pred HHHHHHHHhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcch-hhHHHHHHhhhhhHHHH-HHhhhHHhhcccCh
Q 011781 191 LATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEER-SRAVSFVFGGLSFGSVA-GLLLAPPIIENLGW 268 (477)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r-~~~~~~~~~~~~~g~~i-g~~~~~~l~~~~g~ 268 (477)
+...+.....+.........+....+.....+.......+...++.| -...+....+.+.++++ ++...+.....++|
T Consensus 355 ~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~ap~y~~ 434 (495)
T KOG2533|consen 355 IIGAISLLAAAVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSLDAPRYGW 434 (495)
T ss_pred HHHHHHHHhhccchHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhcccccCcchhh
Confidence 54422222333334344444444455566667777777777755443 33334444444444444 44444445556788
Q ss_pred hHHHHHHHH
Q 011781 269 ESVFYIFGL 277 (477)
Q Consensus 269 ~~~~~~~~~ 277 (477)
.+.|.....
T Consensus 435 ~~~f~~~~~ 443 (495)
T KOG2533|consen 435 GAVFYMLVA 443 (495)
T ss_pred hhHHHHHHH
Confidence 888854443
No 244
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.36 E-value=3.9e-06 Score=83.17 Aligned_cols=68 Identities=12% Similarity=0.118 Sum_probs=60.8
Q ss_pred cHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHH-Hhc
Q 011781 335 SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNL-IAT 402 (477)
Q Consensus 335 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~~ 402 (477)
.+.++..+...+...+.++++..++|.|+++.+|++..+++.+.+...+...++.+++|+++||+ |+|
T Consensus 8 p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrr 76 (493)
T PRK15462 8 PRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNR 76 (493)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcH
Confidence 35667777777788888999999999999988999999999999999999999999999999999 876
No 245
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.33 E-value=3.4e-06 Score=60.49 Aligned_cols=70 Identities=21% Similarity=0.166 Sum_probs=61.0
Q ss_pred HHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHH
Q 011781 119 TSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLI 188 (477)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 188 (477)
+-..+++.....+.+.++++.+.++.|+|+.++|.+.++..+...++++++|.++||+++++.......+
T Consensus 5 lk~~yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 5 LKAFYFFYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence 3445666777788888999999999999999999999999999999999999999999999888766544
No 246
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=98.32 E-value=0.001 Score=65.93 Aligned_cols=278 Identities=11% Similarity=0.010 Sum_probs=155.3
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHhHHh-hhhhhCCCcchhhHHHHHHHH-HHHHhhhhhhhhhhhhcChhHHHHHHHHHH
Q 011781 113 YKLIGTTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFW-GYALSQLPGGWLAKIFGGRKVLQTGVLIWS 190 (477)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~-~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 190 (477)
++-++.+.+..|+..+..+..-..-.. +.... .++.+.++=....+ ..++...+..++++++++.+++-+....+.
T Consensus 23 ~~k~~~l~~m~f~i~f~y~~lR~~KD~lvvt~~--gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~ 100 (491)
T PF03219_consen 23 LKKFLPLALMFFFILFNYTILRDLKDTLVVTAQ--GAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFL 100 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCeEEEecC--ChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 344555555555555555544433222 12222 45566666555555 344567788999999999998876655554
Q ss_pred HHHHHHHHh--h------ch----------------------HHHHHHHHHHHHhhccchhh-hHHHHhhhhcCCcchhh
Q 011781 191 LATALLPLL--A------GF----------------------MPGLVLSRVLVGIGEGVSPS-AATDLIARSIPLEERSR 239 (477)
Q Consensus 191 ~~~~~~~~~--~------~~----------------------~~~~~~~~~l~g~~~~~~~~-~~~~~i~~~~~~~~r~~ 239 (477)
..+.+++++ + ++ .|...+..+..-+-.+...+ .-+.+..+.++.+|..|
T Consensus 101 ~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKR 180 (491)
T PF03219_consen 101 GFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKR 180 (491)
T ss_pred HHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHH
Confidence 444444332 0 00 01111222222222233333 45788899999999999
Q ss_pred HHHHHHhhhhhHHHHHHhhhHHhhc---------ccChhHHHHHHH----HHHHHHHHHHHHhccCCcCCCCCCCCcchh
Q 011781 240 AVSFVFGGLSFGSVAGLLLAPPIIE---------NLGWESVFYIFG----LLGIAWFSGFKILQEGETSNGATLAPRSNY 306 (477)
Q Consensus 240 ~~~~~~~~~~~g~~ig~~~~~~l~~---------~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (477)
..++...+.++|.++++.+..++.+ .-.|...+.... +.+++......++.+....++... +..+.
T Consensus 181 fYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~v~~~g~~i~~~~~~~~~~vl~~~~~~-~~~~~ 259 (491)
T PF03219_consen 181 FYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAGVDAWELSLNSLMGIVLILGIVIILLYRYMNKNVLTDPRFY-PSAKK 259 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccccc-hhhhc
Confidence 9999999999999999999888877 123543332222 222222222333322111111100 00000
Q ss_pred hhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHhhCCchhh---hHHHHHHHHH
Q 011781 307 INMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTE---AAWVSILPPL 383 (477)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~---~g~~~~~~~~ 383 (477)
... ..++..-..+++.++++|.+..+++...+++.....+....-..+++.+.-+... .|......++
T Consensus 260 ~kk---------~k~k~s~~es~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGi 330 (491)
T PF03219_consen 260 KKK---------KKPKMSLKESFKLLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGI 330 (491)
T ss_pred ccc---------cCCCccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHH
Confidence 000 0000011134578889999999998888888887777776666666544322221 2445566677
Q ss_pred HHHHHHHhhhhchhHHHhc
Q 011781 384 ASVLVTSIAAQFADNLIAT 402 (477)
Q Consensus 384 ~~~~~~~~~g~l~dr~g~~ 402 (477)
..++..++.+.+.+|+|-+
T Consensus 331 vtii~~~l~~~iir~~GW~ 349 (491)
T PF03219_consen 331 VTIIMMFLSSNIIRRFGWR 349 (491)
T ss_pred HHHHHHHHHHHHHHHhhHH
Confidence 7777778888888888765
No 247
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.28 E-value=1.4e-05 Score=73.91 Aligned_cols=142 Identities=20% Similarity=0.119 Sum_probs=110.6
Q ss_pred HHHHHhhhhHHHHhHHhh-hhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhc--ChhHHHHHHHHHHHHHHHHHHh
Q 011781 123 FVICNMDKVNLSVAIIPM-SHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFG--GRKVLQTGVLIWSLATALLPLL 199 (477)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~-~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g--~r~~~~~~~~~~~~~~~~~~~~ 199 (477)
.++.......+....+.+ ...+|+++.+.|-+.+...+...+.+....+..||.. .+-.+..+..++.-..++.. .
T Consensus 270 ~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls-~ 348 (451)
T KOG2615|consen 270 YFLYLELFSGLENTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLS-L 348 (451)
T ss_pred HHHHHHHHHHHHhhHHHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHh-c
Confidence 333333344444444444 4679999999999999999999999999999999877 55566655555444444443 4
Q ss_pred hchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcc
Q 011781 200 AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN 265 (477)
Q Consensus 200 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~ 265 (477)
......+++...+..+..+...+....++....|.++||.++|+..+...++-++||+++|.+..+
T Consensus 349 ~~~~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~W 414 (451)
T KOG2615|consen 349 ARTPVVLYLGSTLKSFSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSW 414 (451)
T ss_pred cccchhhhHHHHHHHHHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEE
Confidence 455567888889999998889999999999999999999999999999999999999999987654
No 248
>PTZ00207 hypothetical protein; Provisional
Probab=98.28 E-value=9.6e-06 Score=81.86 Aligned_cols=171 Identities=11% Similarity=-0.001 Sum_probs=118.2
Q ss_pred HHHHHHHHHHHhhhhHHHHhHHhhhhhh-CC-CcchhhH-HHHHHHHHHHHhhhhhhhhhhh---------hcChhHHHH
Q 011781 117 GTTSLAFVICNMDKVNLSVAIIPMSHRF-GW-NSSVAGL-VQSSFFWGYALSQLPGGWLAKI---------FGGRKVLQT 184 (477)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~-s~~~~g~-~~~~~~~~~~~~~~~~g~l~dr---------~g~r~~~~~ 184 (477)
++++..+++.......+..-+.++.+.+ |. ...+... +.++..++..+|.+..|.+... +.|--.+.+
T Consensus 356 Wll~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~ 435 (591)
T PTZ00207 356 WCLLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFI 435 (591)
T ss_pred HHHHHHHHHhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHH
Confidence 3444444444444444444566777888 66 3332233 7889999999999999987722 111122333
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHH-HhhhHHhh
Q 011781 185 GVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAG-LLLAPPII 263 (477)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig-~~~~~~l~ 263 (477)
..+ +.++.+++....+. ..+++.-++.|++.|..++.....++|+|. ++-|+...+......+|..+- ..+.|.+.
T Consensus 436 ~~~-~~~~~lll~~~~p~-~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Y 512 (591)
T PTZ00207 436 PSV-CIITMLTLFLTLPK-AALPLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWY 512 (591)
T ss_pred HHH-HHHHHHHHHHHCCc-cHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHH
Confidence 333 55555555333332 578999999999999999999999999999 888888888888888888776 56777776
Q ss_pred ccc----------C---hhHHHHHHHHHHHHHHHHHHHhc
Q 011781 264 ENL----------G---WESVFYIFGLLGIAWFSGFKILQ 290 (477)
Q Consensus 264 ~~~----------g---~~~~~~~~~~~~~~~~~~~~~~~ 290 (477)
|.- | ++.+|++.+.++++..+....+.
T Consensus 513 d~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l~ 552 (591)
T PTZ00207 513 TQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTYVH 552 (591)
T ss_pred HHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhhee
Confidence 531 2 78899999988888777665553
No 249
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.27 E-value=5.2e-06 Score=59.98 Aligned_cols=76 Identities=24% Similarity=0.322 Sum_probs=67.5
Q ss_pred HHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhch
Q 011781 126 CNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGF 202 (477)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~ 202 (477)
.+.+...+++.+|.+.++.++|..+.|++.+.+.+|+.+|.+...++.++.++++.+..+.+...+..+.++ ..++
T Consensus 4 mGigRFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma-~~~~ 79 (85)
T PF06779_consen 4 MGIGRFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMA-LTHS 79 (85)
T ss_pred hhhHHHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH-HHhc
Confidence 456788999999999999999999999999999999999999999999998888999999888888777775 4444
No 250
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.23 E-value=1.1e-05 Score=82.01 Aligned_cols=161 Identities=16% Similarity=0.046 Sum_probs=108.5
Q ss_pred HHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhchHH--HHHHHH
Q 011781 133 LSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMP--GLVLSR 210 (477)
Q Consensus 133 ~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 210 (477)
....++.....+|.+... ................+...|++|||.....+..+..++.++.++...... ...+..
T Consensus 337 ~y~gl~~~~~~lg~~~~~---~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (521)
T KOG0255|consen 337 VYYGLSLNVSGLGGNIYL---NFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILP 413 (521)
T ss_pred HHHhhhhhhhhcCchHHH---HHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHH
Confidence 333344444555544433 333333344455555688999999999999999998888888866554433 355555
Q ss_pred HHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHHHHHHHHHHHHH-HHHHh
Q 011781 211 VLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFS-GFKIL 289 (477)
Q Consensus 211 ~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~~~~~~~~~~~-~~~~~ 289 (477)
.+..++.+..+.....+..|++|...|..+.+..+....+|.+++|.+...... ......+.+.+.+..+..+ ...++
T Consensus 414 ~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~l 492 (521)
T KOG0255|consen 414 LLGKFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQ-MFPLLGLILFGWLALLLGLLSLLLL 492 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcccchHHHHHHHHHHHHHHHHhcC
Confidence 666666666777779999999999999999999999999999999999866554 2222233333444444443 44777
Q ss_pred ccCCcCCC
Q 011781 290 QEGETSNG 297 (477)
Q Consensus 290 ~~~~~~~~ 297 (477)
|++.....
T Consensus 493 pet~~~~l 500 (521)
T KOG0255|consen 493 PETKGKPL 500 (521)
T ss_pred cccCCCCC
Confidence 77765544
No 251
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.22 E-value=4.2e-05 Score=76.94 Aligned_cols=181 Identities=17% Similarity=0.149 Sum_probs=126.9
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHhHHhh-hhhhCCCc---chhhHHHHHHHHHHHHhhhhhhhhhhhhcChhH-HHHHHH
Q 011781 113 YKLIGTTSLAFVICNMDKVNLSVAIIPM-SHRFGWNS---SVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKV-LQTGVL 187 (477)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~s~---~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~-~~~~~~ 187 (477)
+|.+...++..++.++.......+.|.. ..-++-+. ...++......++..++.++.|.+..+++|-|. ++++.+
T Consensus 309 ~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~ 388 (599)
T PF06609_consen 309 RRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSV 388 (599)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHH
Confidence 3455555556666665555555666664 33455444 357888888899999999999999998877554 456655
Q ss_pred HHHHHHHHHHHh-hchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcc-
Q 011781 188 IWSLATALLPLL-AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN- 265 (477)
Q Consensus 188 ~~~~~~~~~~~~-~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~- 265 (477)
++.+++.+++.. .++....+...++.|++.+..........+-..|+++.+.+.|+..+...+|+.+|..+...+..+
T Consensus 389 ~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~I~~n~ 468 (599)
T PF06609_consen 389 LMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNAIFTNK 468 (599)
T ss_pred HHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhh
Confidence 555443333222 344455667788999998888888877777778989999999999998888888887665443210
Q ss_pred -------------------------------------------------------------cChhHHHHHHHHHHHHHHH
Q 011781 266 -------------------------------------------------------------LGWESVFYIFGLLGIAWFS 284 (477)
Q Consensus 266 -------------------------------------------------------------~g~~~~~~~~~~~~~~~~~ 284 (477)
.++|++|+....+..++++
T Consensus 469 ~~~~l~~~v~~a~~~aglp~~sl~~li~a~~~~~~~a~~~iPGit~~i~~a~~~A~~~aYa~ay~~V~~~siaFG~vaii 548 (599)
T PF06609_consen 469 LPKELPKYVAPAALAAGLPESSLPALIEALAAGNLEALAAIPGITPEIIAAVVAAFQEAYAHAYRYVYYSSIAFGVVAII 548 (599)
T ss_pred hhHhHHHHHHHHHHhcCCChhhHHHHHHHHhccChhHHhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1478888888888888888
Q ss_pred HHHHhccCC
Q 011781 285 GFKILQEGE 293 (477)
Q Consensus 285 ~~~~~~~~~ 293 (477)
..+++++.+
T Consensus 549 aa~fl~d~~ 557 (599)
T PF06609_consen 549 AALFLGDID 557 (599)
T ss_pred HHHHcCChH
Confidence 888886654
No 252
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.17 E-value=1.3e-05 Score=77.46 Aligned_cols=133 Identities=12% Similarity=0.071 Sum_probs=87.4
Q ss_pred HHhhcHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceeh
Q 011781 331 AIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVR 410 (477)
Q Consensus 331 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r 410 (477)
+++.++....+++...+.+++.....+++=-++++ ++..+...|...+..-.+.++.-++.+++.+|+|+-
T Consensus 366 ~~~~s~~~llff~~av~mG~g~~lv~tFLfWHled-~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv-------- 436 (618)
T KOG3762|consen 366 KVFASPHILLFFFVAVVMGAGVGLVFTFLFWHLED-LGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHV-------- 436 (618)
T ss_pred HHhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhh-cCCcceeeeehhhhhccchHHHHHHHHHHHHHhccc--------
Confidence 45667777777777888888888888888888876 677777888888888888999999999999999875
Q ss_pred hhhhHHhhhhhHHHHhhhcccCCCchHHHHHH-HHHHHHhhhhhhhhhhHhhhccCccchhhhhhh
Q 011781 411 KICQTIAFLSPAVCMTLSSIDLGLPHWEIVGI-LTAGLALSSFALSGLYCTHQDISPEYASILLYL 475 (477)
Q Consensus 411 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~p~~~g~~~gl 475 (477)
+.+.........=.+.+..+ .+ +|.++-+ ++-|...+.++......+....||+-+.++.|+
T Consensus 437 ~v~~lgLa~~~~Rf~~~S~L--~n-~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l 499 (618)
T KOG3762|consen 437 NVMYLGLACNVGRFLYYSYL--QN-PWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGL 499 (618)
T ss_pred ceeeehhhHHHHHHHHHHHh--cC-chheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHH
Confidence 22222222222223333332 23 4444434 555666555555444444444566668888775
No 253
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=98.16 E-value=0.0005 Score=66.44 Aligned_cols=278 Identities=9% Similarity=-0.025 Sum_probs=142.6
Q ss_pred HHHHHHHHHHhhhhHHHHhHHhhhhh--hCCCcchhhHHHHHHHHHHHHhhhhhhhhhh-----hhcChhHHHHH-HHHH
Q 011781 118 TTSLAFVICNMDKVNLSVAIIPMSHR--FGWNSSVAGLVQSSFFWGYALSQLPGGWLAK-----IFGGRKVLQTG-VLIW 189 (477)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d-----r~g~r~~~~~~-~~~~ 189 (477)
++.+.+++++.-.+.....+|.+.++ -+.|.++.|...-.. ..+ -.-++|.++.| |+||||..++- ..+.
T Consensus 4 lL~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q~~~fSla~-~Pf-SlKlLWaPiVDs~y~~~~GRRKSWiiP~Q~l~ 81 (544)
T PF13000_consen 4 LLVLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQQAIFSLAS-YPF-SLKLLWAPIVDSVYSKRIGRRKSWIIPIQYLS 81 (544)
T ss_pred HHHHHHHHcCcccccccccchhhhccccCCCChhHheeeeeee-chh-HHHHhhhhhhhhhcccccCCcchhhhHHHHHH
Confidence 45556677776666655678887777 677777766543211 111 12345566655 79999987653 2333
Q ss_pred HHHHHHHHHhhc---------h--------------HHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHh
Q 011781 190 SLATALLPLLAG---------F--------------MPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFG 246 (477)
Q Consensus 190 ~~~~~~~~~~~~---------~--------------~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~ 246 (477)
++.++.++...+ + ...+....++.-+..+.-..+.-.+.-.+..+++++.+..-...
T Consensus 82 g~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ASTcqtv 161 (544)
T PF13000_consen 82 GILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGYASTCQTV 161 (544)
T ss_pred HHHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcchHHHHHHh
Confidence 333333221110 0 01122333344444566666777777777777888777776666
Q ss_pred hhhhHHHHHHhhhHHhhcc----------------cChhHHHHHHHHHHHHHHHHHHHhccCCcCCCCCCCCc----chh
Q 011781 247 GLSFGSVAGLLLAPPIIEN----------------LGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPR----SNY 306 (477)
Q Consensus 247 ~~~~g~~ig~~~~~~l~~~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 306 (477)
+.++|..++-.+.-.+-+. ..-.....+.|.+.++..+...+++++++......+.+ .+.
T Consensus 162 G~~~Gyfls~tvFlalns~~f~Nky~r~~p~~~glvtl~~yl~fwg~~~l~~T~~v~~~k~E~~~~~~~~~~~~~~~~~~ 241 (544)
T PF13000_consen 162 GQTAGYFLSFTVFLALNSPDFCNKYLRSTPSDEGLVTLSGYLKFWGWVFLIVTILVAFFKKEKPHSESLPKIEPINKSDG 241 (544)
T ss_pred HhhhhHHHHHHHHHhhCCHHHHHHhcccCCCCCCeeeHHHHHHHHHHHHHHHHHHHheEeecccccccCccccccccccc
Confidence 6667766665544333210 11223334455555555555555544333211110000 000
Q ss_pred hhhhhhh-hhhHH---hhccCCCC---CCHHHHhhcHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHhhCCchhhhHHHHH
Q 011781 307 INMKKSL-SASLE---EMGESLKD---VPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSI 379 (477)
Q Consensus 307 ~~~~~~~-~~~~~---~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~ 379 (477)
...+... .++.+ ..+...-+ ..+.+++|-|.+..+++..+..-.++.+.......-+.| .|++.+..+.+..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~i~~~Y~~l~~ilkLp~V~~li~ilL~~KigF~a~da~T~LKLlE-kG~~KE~LAl~~l 320 (544)
T PF13000_consen 242 KSKEISIEYDESDVISTEEILSIKDVYKSLWKILKLPNVQTLIIILLTAKIGFQANDAVTSLKLLE-KGLSKEDLALLVL 320 (544)
T ss_pred cccccceecccccccchhhhhhHHHHHHHHHHHHcCchHHHHHHHHHHHHhccccchhhhHHHHHH-cCCCHHHhHHHHH
Confidence 0000000 00000 00000001 123455677888888888877777777777777777766 6999988776544
Q ss_pred HHHHHHHHHHHhhhhchhHHHhc
Q 011781 380 LPPLASVLVTSIAAQFADNLIAT 402 (477)
Q Consensus 380 ~~~~~~~~~~~~~g~l~dr~g~~ 402 (477)
+ .+...++.|+++.|+-+.
T Consensus 321 i----~~P~qii~~~~~~Kws~g 339 (544)
T PF13000_consen 321 I----DFPFQIILPYYIGKWSAG 339 (544)
T ss_pred H----hhhHHHHHHHHhhhhhcC
Confidence 3 344444555555555443
No 254
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=98.14 E-value=0.0067 Score=58.74 Aligned_cols=278 Identities=11% Similarity=-0.025 Sum_probs=153.1
Q ss_pred hHHHHHHHHHHHHHHHhhhhHHHHhHHhhhhhhC---CCcchhhHHHHHHHH-HHHHhhhhhhhhhhhhcChhHHHHHHH
Q 011781 112 RYKLIGTTSLAFVICNMDKVNLSVAIIPMSHRFG---WNSSVAGLVQSSFFW-GYALSQLPGGWLAKIFGGRKVLQTGVL 187 (477)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~s~~~~g~~~~~~~~-~~~~~~~~~g~l~dr~g~r~~~~~~~~ 187 (477)
.++.++.+.+..++..+..+..- .+.+.+. ..+..+.++=+...+ +.++..++.+++.+++.+.+++-+...
T Consensus 25 E~~kflpl~Ll~f~I~~ny~~lR----~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~ 100 (509)
T COG3202 25 ELKKFLPLALLFFCILFNYNLLR----SLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILG 100 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH----HhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHH
Confidence 34444444444444444444333 3444443 346677888888777 666888999999999999998877666
Q ss_pred HHHHHHHHHHHhhc--------h-----------H------------HHHHHHHHHHHhhccchhh-hHHHHhhhhcCCc
Q 011781 188 IWSLATALLPLLAG--------F-----------M------------PGLVLSRVLVGIGEGVSPS-AATDLIARSIPLE 235 (477)
Q Consensus 188 ~~~~~~~~~~~~~~--------~-----------~------------~~~~~~~~l~g~~~~~~~~-~~~~~i~~~~~~~ 235 (477)
.+...++++++.-. + . |...+..++.=+-.+.... .-+....|....+
T Consensus 101 ~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~ 180 (509)
T COG3202 101 FFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIE 180 (509)
T ss_pred HHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 65555555543211 0 0 1111111111121122222 4566778888889
Q ss_pred chhhHHHHHHhhhhhHHHHHHhhhHHhhcccC----------hhHHHHHHHHHHHHHHHHHHHhccCCcCCCCCCCCcch
Q 011781 236 ERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG----------WESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSN 305 (477)
Q Consensus 236 ~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (477)
|..|..++++.+.+++..+++.+..++..+.. .+..+.+.++..+++..+..++.+.-.+++.-..+..+
T Consensus 181 eakRFy~lf~l~~ni~lllsg~~~~~~~k~~~~~~~~~~~~~~~~~~~vi~~~~~i~~~l~~~~~r~il~~~~f~~~~~~ 260 (509)
T COG3202 181 EAKRFYPLFGLGANISLLLSGEVTSWLSKHRDALASEFKDLLLQILFIVIVILGIIAILLYRYINRNVLTDPLFYLRAKK 260 (509)
T ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHHHhhchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhHHHhc
Confidence 99999999999999999999999888876321 23344444444444444444443221111110000000
Q ss_pred hhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHhhCCchhh---hHHHHHHHH
Q 011781 306 YINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTE---AAWVSILPP 382 (477)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~---~g~~~~~~~ 382 (477)
..+.+ ..+..-..+++.+.++|.++.+.+...+++.+...+-...-.-.++.+-.+... .|.+....+
T Consensus 261 kk~~~---------k~k~~~~~s~k~i~~SkyL~~ial~vl~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tg 331 (509)
T COG3202 261 KKKKK---------KLKLGLIESFKMILRSKYLGAIALLVLAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIWTG 331 (509)
T ss_pred ccccc---------cccCcHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHHHH
Confidence 00000 000000123567888999999888888888777666554444443332222222 233444455
Q ss_pred HH-HHHHHHhhhhchhHHHhc
Q 011781 383 LA-SVLVTSIAAQFADNLIAT 402 (477)
Q Consensus 383 ~~-~~~~~~~~g~l~dr~g~~ 402 (477)
+. .++...+++.+.+|.|--
T Consensus 332 vv~~v~~~~~~s~~ir~~GW~ 352 (509)
T COG3202 332 VVSLVVFLFPGSNLIRRVGWF 352 (509)
T ss_pred HHHHHHHHhhhHHHHHHhhHH
Confidence 55 455566777888887643
No 255
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.08 E-value=0.00012 Score=71.99 Aligned_cols=124 Identities=21% Similarity=0.217 Sum_probs=105.8
Q ss_pred hhhhhhCCCcchhhHHHHHHHHHHHHhhhhhh-hhhhhhcChhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhhc
Q 011781 139 PMSHRFGWNSSVAGLVQSSFFWGYALSQLPGG-WLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGE 217 (477)
Q Consensus 139 ~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g-~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~ 217 (477)
++...++++..+.+...+.......+++++.. .+...+|.|++...|++...+.....+ +....|..+...++.++.
T Consensus 267 yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~a-f~~~~w~~~~~~v~~~~~- 344 (463)
T KOG2816|consen 267 YLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFA-FATETWMMFAAGVVVALA- 344 (463)
T ss_pred EEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHH-HhccchhhhHHHHHHHhh-
Confidence 35667899999999999999988888888877 677788999988899888888888875 555557777777777665
Q ss_pred cchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhc
Q 011781 218 GVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE 264 (477)
Q Consensus 218 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~ 264 (477)
....|+..+.++.+.+++++|+++++......+..+++|.+-+.+..
T Consensus 345 ~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~ 391 (463)
T KOG2816|consen 345 GIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFA 391 (463)
T ss_pred cchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHH
Confidence 67789999999999999999999999999999999999999887754
No 256
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.02 E-value=4.3e-05 Score=74.05 Aligned_cols=113 Identities=10% Similarity=-0.043 Sum_probs=82.7
Q ss_pred HHHhhhhhHHHHHhhCCchhh-hHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhhhHHHHhhhccc
Q 011781 353 YTCLSWLPTYFSEELSLNLTE-AAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSID 431 (477)
Q Consensus 353 ~~~~~~~~~~~~~~~g~~~~~-~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~~~~l~~~~ 431 (477)
-....+...++.+.+|++..+ .|.+...+..+..+..+++|+++||+|.| +.+....+...+..+++...
T Consensus 42 R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K--------~vL~l~~l~Wsl~t~L~~fa- 112 (511)
T TIGR00806 42 RPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYK--------PVLVLQALSFVCVWLLLLLG- 112 (511)
T ss_pred hchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCch--------HHHHHHHHHHHHHHHHHHHH-
Confidence 344555666777789999999 99999999999999999999999999987 44444444443433333332
Q ss_pred CCCchHHHHHHHHHHHHhhhhhhhhhhHhhhccCccchhhhhhhc
Q 011781 432 LGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLYLE 476 (477)
Q Consensus 432 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~g~~~gl~ 476 (477)
.+...+.+.-+++|.+-+... .....+..-+++++|+++.|+.
T Consensus 113 -~Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~ 155 (511)
T TIGR00806 113 -TSVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYS 155 (511)
T ss_pred -HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHH
Confidence 234445566677888877777 6677777778999999998863
No 257
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.99 E-value=3.4e-05 Score=55.32 Aligned_cols=61 Identities=20% Similarity=0.224 Sum_probs=54.7
Q ss_pred HHHHHHHhHHHHHHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhc
Q 011781 341 MIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIAT 402 (477)
Q Consensus 341 ~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~ 402 (477)
+-...++...+..++..++|.|+++ .|+++.++|.+.++..+..+++.+++|+++||++++
T Consensus 5 lk~~yf~~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~ 65 (77)
T PF12832_consen 5 LKAFYFFYFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKR 65 (77)
T ss_pred HHHHHHHHHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCcc
Confidence 4455667777888899999999986 799999999999999999999999999999999887
No 258
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=97.88 E-value=0.0057 Score=62.05 Aligned_cols=158 Identities=20% Similarity=0.122 Sum_probs=121.6
Q ss_pred hHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhh-cChhHHHHHHHHHHHHHHHHHHhhch-------
Q 011781 131 VNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIF-GGRKVLQTGVLIWSLATALLPLLAGF------- 202 (477)
Q Consensus 131 ~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~~~------- 202 (477)
......+.++..+++.+...+.-....+.-...+.++.++.++|-| ||-+++.++.++..++..++.+.+.-
T Consensus 55 g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~ 134 (571)
T KOG1237|consen 55 GLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFM 134 (571)
T ss_pred cchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcc
Confidence 3346677788889998888888888888888888999999999975 88888888877777765444322110
Q ss_pred -----------------HHHHHHHHHHHHhhccchhhhHHHHhhhhcC---Ccc---hhhHHHHHHhhhhhHHHHHHhhh
Q 011781 203 -----------------MPGLVLSRVLVGIGEGVSPSAATDLIARSIP---LEE---RSRAVSFVFGGLSFGSVAGLLLA 259 (477)
Q Consensus 203 -----------------~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~---~~~---r~~~~~~~~~~~~~g~~ig~~~~ 259 (477)
...++...-+..+|.++.-|...++-+|-++ +++ +...+.++....++|..++-.+.
T Consensus 135 ~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~ 214 (571)
T KOG1237|consen 135 CKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVL 214 (571)
T ss_pred ccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHH
Confidence 1245666677778999999999999999997 322 23678888899999999999998
Q ss_pred HHhhcccChhHHHHHHHHHHHHHHHHHHH
Q 011781 260 PPIIENLGWESVFYIFGLLGIAWFSGFKI 288 (477)
Q Consensus 260 ~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 288 (477)
.++-+..||.+.|.+..++.++++++++.
T Consensus 215 vyiq~~~~w~lgf~i~~~~~~lai~iF~~ 243 (571)
T KOG1237|consen 215 VYIQDNVGWKLGFGIPTVLNALAILIFLP 243 (571)
T ss_pred HhhhhcccceeeccHHHHHHHHHHHHHHc
Confidence 88888899999999988877766655544
No 259
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.81 E-value=0.00017 Score=69.86 Aligned_cols=111 Identities=21% Similarity=0.268 Sum_probs=89.1
Q ss_pred hHHHHHHHHHHHHHHHHHHh--hchH------HHHHHHHHHHHhhccchhhhHHHHhhhhcCCc---chhhHHHHHHhhh
Q 011781 180 KVLQTGVLIWSLATALLPLL--AGFM------PGLVLSRVLVGIGEGVSPSAATDLIARSIPLE---ERSRAVSFVFGGL 248 (477)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~--~~~~------~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~ 248 (477)
|++.++.+++.++.+++... .... +.++++.++.++|.|+.-|...++.+|.++++ +|.+.+.++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 45677778888888774322 2222 46888899999999999999999999999765 4677888999999
Q ss_pred hhHHHHHHhhhHHhhcccChhHHHHHHHHHHHHHHHHHHHhc
Q 011781 249 SFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQ 290 (477)
Q Consensus 249 ~~g~~ig~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 290 (477)
++|..++..+.+++.++.||.+.|.+.++..++..+.++.-.
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~ 123 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGR 123 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCC
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999999999988887776665543
No 260
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.79 E-value=0.0007 Score=64.76 Aligned_cols=112 Identities=18% Similarity=0.095 Sum_probs=78.5
Q ss_pred CcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHH--HHHHHHHH--HhhchHHHHHHHHHHHHhhccchhh
Q 011781 147 NSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIW--SLATALLP--LLAGFMPGLVLSRVLVGIGEGVSPS 222 (477)
Q Consensus 147 s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~l~g~~~~~~~~ 222 (477)
...+..+...++.+|..++.--... +.-|++.+.+.+-. .+..++-. .+.++.|.+++..+..|+..|..+.
T Consensus 279 ~r~~Y~~Y~~~YQ~GVFISRSS~~~----~rir~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YV 354 (402)
T PF02487_consen 279 PRDQYRWYQLLYQLGVFISRSSLPF----FRIRRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYV 354 (402)
T ss_pred HHHHHHHHHHHHHHHHhhhhcceee----eehhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHH
Confidence 3566777778888777666443222 22344444432221 11111111 1235667888889999999999999
Q ss_pred hHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHh
Q 011781 223 AATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPI 262 (477)
Q Consensus 223 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l 262 (477)
.....+.+..++++|..++|..+.+.++|..++.+++-.+
T Consensus 355 NtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 355 NTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998887654
No 261
>PRK03612 spermidine synthase; Provisional
Probab=97.63 E-value=0.0057 Score=61.60 Aligned_cols=156 Identities=15% Similarity=0.139 Sum_probs=91.6
Q ss_pred HHHhhhhHHHHhHHh-hhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHH-HHHHHH-HHHHHHHHhh-
Q 011781 125 ICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQT-GVLIWS-LATALLPLLA- 200 (477)
Q Consensus 125 ~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~-~~~~~~-~~~~~~~~~~- 200 (477)
+.++....+-..... +..-+|.+....+.+.+++.++..+|+.+++++.++.-++...+- +..+.+ ++..++....
T Consensus 25 ~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~~~e~~i~l~~~~~~~ll~~~~~ 104 (521)
T PRK03612 25 VCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFVAVELLLALLGGLSALILYAAFA 104 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444444444333 444578888899999999999999999999888744333322111 111111 1111110110
Q ss_pred ---chHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhh-cccChhHHHHHHH
Q 011781 201 ---GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPII-ENLGWESVFYIFG 276 (477)
Q Consensus 201 ---~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~-~~~g~~~~~~~~~ 276 (477)
.....++...++.++..|...|....+..+... ++-++..|.......+|+++|.++.+++. ..+|-....++.+
T Consensus 105 ~~~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a 183 (521)
T PRK03612 105 FQGLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTG 183 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHH
Confidence 111122344456677777777777666654322 34567788899999999999999988765 4677554555544
Q ss_pred HHHHH
Q 011781 277 LLGIA 281 (477)
Q Consensus 277 ~~~~~ 281 (477)
.+.++
T Consensus 184 ~l~~~ 188 (521)
T PRK03612 184 SLNLL 188 (521)
T ss_pred HHHHH
Confidence 44433
No 262
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=97.56 E-value=0.0024 Score=61.98 Aligned_cols=140 Identities=19% Similarity=0.079 Sum_probs=106.3
Q ss_pred chhhHHHHHHHHHHHHhhhhhhhhhhhhcCh-------hHHHHHHHHHHHHHHHHHHh----h-----chHHHHHHHHHH
Q 011781 149 SVAGLVQSSFFWGYALSQLPGGWLAKIFGGR-------KVLQTGVLIWSLATALLPLL----A-----GFMPGLVLSRVL 212 (477)
Q Consensus 149 ~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r-------~~~~~~~~~~~~~~~~~~~~----~-----~~~~~~~~~~~l 212 (477)
...++..+++.+..++.+++..++..+.+++ .-+.+++.+.+.+++++... . -+.++++...++
T Consensus 324 vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l 403 (498)
T COG3104 324 VPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVL 403 (498)
T ss_pred cCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHH
Confidence 3457889999999999999988888885544 23455666666666555433 1 235778889999
Q ss_pred HHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHH------hhcccChhHHHHHHHHHHHHHHHHH
Q 011781 213 VGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPP------IIENLGWESVFYIFGLLGIAWFSGF 286 (477)
Q Consensus 213 ~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~------l~~~~g~~~~~~~~~~~~~~~~~~~ 286 (477)
+++|+=...|...+++.+..|+.-.+..++.+......|..++..+++. ..+.......|+..+...++..+..
T Consensus 404 ~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~~~~~~F~~~g~v~i~~~~~~ 483 (498)
T COG3104 404 QSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAFIEGRVFGTIGVVAIVIGILL 483 (498)
T ss_pred HHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccccchhhhhhhhhhhHHHHHHHHHHHHHHH
Confidence 9999999999999999999999889999999999999999988888874 3334456667777777776665554
Q ss_pred HH
Q 011781 287 KI 288 (477)
Q Consensus 287 ~~ 288 (477)
+.
T Consensus 484 ~~ 485 (498)
T COG3104 484 LL 485 (498)
T ss_pred HH
Confidence 43
No 263
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.53 E-value=0.00013 Score=69.41 Aligned_cols=175 Identities=12% Similarity=-0.020 Sum_probs=115.1
Q ss_pred HHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcC-hhHHHHHHHHHHHHHHHH
Q 011781 118 TTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGG-RKVLQTGVLIWSLATALL 196 (477)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~-r~~~~~~~~~~~~~~~~~ 196 (477)
++.+++.......+.....+......-|.+....|++..+..++.++++...|.+.||.+. |.+.++......++.+.+
T Consensus 270 il~~~ygi~~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l 349 (480)
T KOG2563|consen 270 ILAICYGIGLGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLML 349 (480)
T ss_pred HHHHHHhhhHHHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 3334443444444444444444445557777889999999999999999999999999865 444444444433332222
Q ss_pred HHh---hchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccC----hh
Q 011781 197 PLL---AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG----WE 269 (477)
Q Consensus 197 ~~~---~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g----~~ 269 (477)
... ....+.++....+.|++.....|...-+-.|..-|..-+.-.|+.+...++-+++-..+-+...+..+ +.
T Consensus 350 ~~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~ 429 (480)
T KOG2563|consen 350 LTCTLFLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTF 429 (480)
T ss_pred HHhhccCCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCc
Confidence 112 22234567777888999899999998888888766777788898888888888888888888877665 44
Q ss_pred HHHHHHHHHHHHHHHHHHHhccC
Q 011781 270 SVFYIFGLLGIAWFSGFKILQEG 292 (477)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~ 292 (477)
..-+......++.+++..+++++
T Consensus 430 ~~~i~~~~~~~l~~~lva~~r~~ 452 (480)
T KOG2563|consen 430 PANIFLTVSALLGAILVAFFRPD 452 (480)
T ss_pred cchhHhHHHHHHHHHHHhhhhhh
Confidence 33444444444444444455443
No 264
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=97.52 E-value=0.015 Score=57.27 Aligned_cols=97 Identities=20% Similarity=0.151 Sum_probs=51.0
Q ss_pred HHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHh----h---chHHHHHHHHHHHHhhccchhhhHHHHhh
Q 011781 157 SFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLL----A---GFMPGLVLSRVLVGIGEGVSPSAATDLIA 229 (477)
Q Consensus 157 ~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~----~---~~~~~~~~~~~l~g~~~~~~~~~~~~~i~ 229 (477)
...+...+..+..-.+..|+..|.=+..++++..+..++...+ . ..++..++..++.|++.+.......++.+
T Consensus 53 ~~~v~~l~~~~~~~~~~~~i~~~~Ri~~~lv~~~~~~~~~~~l~~~~~~~~~~f~~~~~~v~~~g~~~~~~q~s~~gla~ 132 (437)
T TIGR00939 53 ASQLPSLLFNSLNLFLIFRIPVTVRLLGGLVILLVVVILVMVLVKVQTSETGFFVTTMASVVIINSGMALLQGSLFGLAG 132 (437)
T ss_pred HHHHHHHHHHHHHHHHhhccCccchhHHHHHHHHHHHHHHhheeeecCCcchHHHHHHHHHHHHHhhhhhhcccchhhcc
Confidence 3444444444555555556655333333333222222221111 1 23556677778889988888888877776
Q ss_pred hhcCCcchhhHHHHHHhhhhhHHHHHHhh
Q 011781 230 RSIPLEERSRAVSFVFGGLSFGSVAGLLL 258 (477)
Q Consensus 230 ~~~~~~~r~~~~~~~~~~~~~g~~ig~~~ 258 (477)
. +|++ .++.+..+.+++++++.++
T Consensus 133 ~-fp~~----~~~a~~~G~g~aGv~~s~~ 156 (437)
T TIGR00939 133 V-FPST----YSSAVMSGQGLAGVLTSLA 156 (437)
T ss_pred c-CCHH----HHHHHHhcchhHHHHHHHH
Confidence 4 5533 3455555566666555444
No 265
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=97.45 E-value=0.001 Score=59.90 Aligned_cols=136 Identities=17% Similarity=0.113 Sum_probs=87.0
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhhccchhhhHHHHhhh
Q 011781 151 AGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIAR 230 (477)
Q Consensus 151 ~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~ 230 (477)
.|.+.-.-.+...+..+.+..+.||+.--.=..+..++.+.++++. .++++.++-+.+..+..++.|..-....++-+.
T Consensus 64 tg~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lV-afs~s~~~sL~GV~~aSissGlGEiTFL~lss~ 142 (409)
T KOG3880|consen 64 TGAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLV-AFSNSVPMSLLGVVFASISSGLGEITFLALSSR 142 (409)
T ss_pred cchhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEE-EeccchhHHHhhhhhhhhcCCcceeehhhhhcc
Confidence 4555666666777777777888888643332333345555666666 477877888888888888877665555554433
Q ss_pred hcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcc--cChhHHHHHHHHHHHHHHHHHHHhccC
Q 011781 231 SIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN--LGWESVFYIFGLLGIAWFSGFKILQEG 292 (477)
Q Consensus 231 ~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (477)
+++ ...+-++.+.+.++.+|..--..+.+. ++.+.+.++...+-++.+..++++.+.
T Consensus 143 -Y~~----~~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~ 201 (409)
T KOG3880|consen 143 -YPS----IVIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKS 201 (409)
T ss_pred -CCC----ceeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCC
Confidence 332 234556777777777777666666653 457888888777776665555555443
No 266
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=97.44 E-value=0.018 Score=54.95 Aligned_cols=120 Identities=17% Similarity=0.042 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHH----HhhhhhhhhhhhhcChhHHHHHHHHHH
Q 011781 115 LIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYA----LSQLPGGWLAKIFGGRKVLQTGVLIWS 190 (477)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~----~~~~~~g~l~dr~g~r~~~~~~~~~~~ 190 (477)
.....++..+-..+.++.+....+++.+++-.... .......+.+... +....-.++.-|..+|-..........
T Consensus 19 v~~i~~llGiG~LlpWN~fiTa~~y~~~~~~~~~~-~~~F~~~~~~~a~i~~ll~~~~n~~~~~~~~~~~~~~l~~~~il 97 (406)
T KOG1479|consen 19 VYLIFLLLGIGTLLPWNMFITASDYYYYRFPGYHN-SKNFTSSYTLAAQIPLLLFNLLNAFLNTRLRTRVGYLLSLIAIL 97 (406)
T ss_pred HHHHHHHHhcccccchHhhhccHHHHHhhcCCCch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444445556777777778887776644333 2223333333333 344444444444222211111111111
Q ss_pred HHHHHHHHh--h-----chHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcc
Q 011781 191 LATALLPLL--A-----GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEE 236 (477)
Q Consensus 191 ~~~~~~~~~--~-----~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~ 236 (477)
+...+.... . ..+...++...+.+++.+..........++. |++.
T Consensus 98 ~i~~l~~~~v~~~~~~~~ff~vt~~~vv~~~~a~a~~qgs~~G~a~~~-P~~y 149 (406)
T KOG1479|consen 98 FIVTLDLALVKTDTWTNGFFLVTLIIVVLLNLANAVVQGSLYGLAGLF-PSEY 149 (406)
T ss_pred HHHHHHHHhhccCCccchhHHHHHHHHHHHhhhhhhhccchhhhhhcC-CHHH
Confidence 111111111 1 1234556677778888887777777776664 4333
No 267
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=97.42 E-value=0.029 Score=51.43 Aligned_cols=100 Identities=17% Similarity=0.149 Sum_probs=63.7
Q ss_pred HHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCC--cc
Q 011781 159 FWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPL--EE 236 (477)
Q Consensus 159 ~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~--~~ 236 (477)
.+..+..+++.+.+++++|-|+++.++...+...... -.-+.+..++....+.|++.+..+..--+++++.-.. +.
T Consensus 68 y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~--Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~ya~~ 145 (390)
T KOG3097|consen 68 YLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIAA--NLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQNYANQ 145 (390)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHh--hcchhHHhhccHHHhhccccccccccCcceecHHHHHHHHh
Confidence 3444556666668999999999999887766543222 1233456778888999999998888777776655421 22
Q ss_pred h---------hhHHHHHHhhhhhHHHHHHhhhH
Q 011781 237 R---------SRAVSFVFGGLSFGSVAGLLLAP 260 (477)
Q Consensus 237 r---------~~~~~~~~~~~~~g~~ig~~~~~ 260 (477)
| .+..|.+.+....+...|..++.
T Consensus 146 ~~~q~~~~~~~~ffg~Ffii~~~~qv~gn~iss 178 (390)
T KOG3097|consen 146 RGEQAGDGMKVRFFGEFFIIFQCAQVWGNLISS 178 (390)
T ss_pred hhhhccCceeeeehhHHHHHHHHHHHHHHHHHH
Confidence 3 34455555555555555544433
No 268
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=97.38 E-value=0.004 Score=55.24 Aligned_cols=97 Identities=18% Similarity=0.194 Sum_probs=54.7
Q ss_pred cchhhHHHHHHhhhhhHHHHHHhhhHHh---hc--ccChhHHHHHHHHHHHHHHHHHHHhccCCcCCCCC-CCCcchhhh
Q 011781 235 EERSRAVSFVFGGLSFGSVAGLLLAPPI---IE--NLGWESVFYIFGLLGIAWFSGFKILQEGETSNGAT-LAPRSNYIN 308 (477)
Q Consensus 235 ~~r~~~~~~~~~~~~~g~~ig~~~~~~l---~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 308 (477)
++|+....+...+.++|.++.-...-.. .+ .-.|++++.+.+++.++-++++..+-.+-...... ++++++
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ifGk~fd~~~~~~k~~k~~--- 78 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIFGKNFDIYSPKEKQEKEN--- 78 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCccccccccc---
Confidence 4566666666777778877654332111 11 23599999999888877777766663321111111 100000
Q ss_pred hhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHHHHH
Q 011781 309 MKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHF 346 (477)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 346 (477)
.....+....+.+|++..|...+...
T Consensus 79 ------------~~~~~~~s~~~~LK~K~tw~w~~~Yg 104 (267)
T PF07672_consen 79 ------------STLSKKPSYKSILKEKETWKWILIYG 104 (267)
T ss_pred ------------ccccccchHHHHHccchHHHHHHHHH
Confidence 01112345789999999887766543
No 269
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=97.20 E-value=0.0012 Score=64.59 Aligned_cols=77 Identities=17% Similarity=0.132 Sum_probs=64.8
Q ss_pred HHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHHHHHHHHHHHHHHH
Q 011781 210 RVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGF 286 (477)
Q Consensus 210 ~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~ 286 (477)
-++.|.+.........++-++...|++++.+.++++.....+..+||++...+....|.|+...+.+...++....+
T Consensus 395 i~~~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g~~~v~~~~~~~~l~~~~l~ 471 (488)
T KOG2325|consen 395 IVVFGIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLSGPRPVWIILLCLLLVVAALW 471 (488)
T ss_pred hheeccccccccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhcCccHHHHHHHHHHHHHHHHH
Confidence 45677777777778889999999999999999999999999999999999999999999988887776665544433
No 270
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=97.17 E-value=0.00067 Score=70.30 Aligned_cols=50 Identities=10% Similarity=0.103 Sum_probs=41.0
Q ss_pred HHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhc
Q 011781 353 YTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIAT 402 (477)
Q Consensus 353 ~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~ 402 (477)
.++....-.-++++++++..+.|++.+.+.++.+++.++.+++.||++++
T Consensus 49 ~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~ 98 (633)
T TIGR00805 49 NGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRP 98 (633)
T ss_pred HHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcc
Confidence 33333333445567999999999999999999999999999999999877
No 271
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.13 E-value=0.0024 Score=63.05 Aligned_cols=149 Identities=15% Similarity=0.038 Sum_probs=107.2
Q ss_pred CCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhh---------chHHHHHHHHHHHHhh
Q 011781 146 WNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLA---------GFMPGLVLSRVLVGIG 216 (477)
Q Consensus 146 ~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~l~g~~ 216 (477)
+++...|.+..+..++..++..+...+..+...|+++..+.++..+..+.-..+. ++.+..+.--++..+.
T Consensus 252 fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~ 331 (433)
T PF03092_consen 252 FSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVI 331 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHH
Confidence 8888889999888889999999998888888889988887776655544321111 1112233344555666
Q ss_pred ccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccCh--------hHHHHHHHHHHHHHHHHHHH
Q 011781 217 EGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGW--------ESVFYIFGLLGIAWFSGFKI 288 (477)
Q Consensus 217 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~--------~~~~~~~~~~~~~~~~~~~~ 288 (477)
....+.....+++++.|+..-|..+++..+..++|..++..++..+.+.++. .+..++..++.++.+.+..+
T Consensus 332 ~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~ll~l~ll~l 411 (433)
T PF03092_consen 332 GMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQLLPLPLLFL 411 (433)
T ss_pred HHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHHHHH
Confidence 6666777888999999999999999999999999999999999998876652 33444555555555555556
Q ss_pred hccCCc
Q 011781 289 LQEGET 294 (477)
Q Consensus 289 ~~~~~~ 294 (477)
+++.++
T Consensus 412 Lp~~~~ 417 (433)
T PF03092_consen 412 LPPQKR 417 (433)
T ss_pred cCCCch
Confidence 665443
No 272
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.09 E-value=0.0068 Score=59.12 Aligned_cols=128 Identities=18% Similarity=0.067 Sum_probs=93.9
Q ss_pred HHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHH---Hhhc------hH
Q 011781 133 LSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLP---LLAG------FM 203 (477)
Q Consensus 133 ~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~---~~~~------~~ 203 (477)
+...+..+....|+++..+|..-++..+..+.+.+...++.+|+|..+.-..+.....++..+.. +... +.
T Consensus 277 f~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~ 356 (432)
T PF06963_consen 277 FGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISA 356 (432)
T ss_pred CcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHH
Confidence 45555555666699999999999999999999999999999999998887776554332222111 1112 12
Q ss_pred HHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhH
Q 011781 204 PGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAP 260 (477)
Q Consensus 204 ~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~ 260 (477)
..++.+.++.=+|.=.+..+..-++.|..|+++||...|...+..++...+-..++-
T Consensus 357 ~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~i 413 (432)
T PF06963_consen 357 YLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTI 413 (432)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 233444444446666777888999999999999999999999999988887666543
No 273
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=96.96 E-value=0.0024 Score=61.24 Aligned_cols=126 Identities=10% Similarity=0.102 Sum_probs=79.2
Q ss_pred HHHHHHHHHHHhHHHHHHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHH
Q 011781 337 AVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTI 416 (477)
Q Consensus 337 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~ 416 (477)
.+..+++...+...=.+.+-..++- .++.+|.++...|++...+.+..+++.+++|++.||++|+ .++.+
T Consensus 34 ~l~il~~vnlmny~Dr~~iagv~~~-v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~---------~v~~v 103 (493)
T KOG1330|consen 34 TLVILCLVNLMNYADRYTIAGVLKE-VQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRK---------RVIAV 103 (493)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhHH-HHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcc---------eEEee
Confidence 3444455555544444444443333 3356899999999999999999999999999999999765 33333
Q ss_pred hhhhhHHHHhhhcccCCCchHH-HHHHHHHHHHhhhhhhhhhhHhhhc-cCccchhhhhhh
Q 011781 417 AFLSPAVCMTLSSIDLGLPHWE-IVGILTAGLALSSFALSGLYCTHQD-ISPEYASILLYL 475 (477)
Q Consensus 417 ~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~-~~p~~~g~~~gl 475 (477)
+..+-.++.+...+. ...|. ++.=.+.|.+-+...+ ....+..+ .+.++|++++|+
T Consensus 104 G~~iW~~Av~~~~fs--~~Fwq~~l~R~~vGiGeAs~~~-ia~s~IaD~f~~~~Rs~~~~i 161 (493)
T KOG1330|consen 104 GIFIWTLAVFASGFS--NHFWQVLLCRGFVGIGEASYSP-IAPSLIADSFPDDKRSRVLGI 161 (493)
T ss_pred HHHHHHHHHHHHHHH--HHHHHHHHHHHHhccchhhhcc-cchhHhhhcCcchhhhHHHHH
Confidence 333333333333332 33444 4444667777665554 44455555 555569999875
No 274
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=96.86 E-value=0.0012 Score=53.49 Aligned_cols=88 Identities=10% Similarity=0.052 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhhhHHHHhhhcccCCCchHHHHHHHHHHHHhhhhhhhhh
Q 011781 378 SILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGL 457 (477)
Q Consensus 378 ~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 457 (477)
.+...++..++.++.+++.||+|+| +...... ....+...+... ..+.....+..++.|.+.+.......
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~--------~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~ 73 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRK--------PVLLVGL-FIFVLSTAMFAL-SSNITVLIIARFLQGFGAAFALVAGA 73 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchh--------HHHHHHH-HHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHhHH
Confidence 3456778889999999999999876 3333222 222222222222 12333344455566666554444433
Q ss_pred hHhhhccCccchhhhhhh
Q 011781 458 YCTHQDISPEYASILLYL 475 (477)
Q Consensus 458 ~~~~~~~~p~~~g~~~gl 475 (477)
....+..+++++++++|+
T Consensus 74 ~~~~~~~~~~~~~~~~~~ 91 (141)
T TIGR00880 74 ALIADIYPPEERGVALGL 91 (141)
T ss_pred HHHHHHCChhhhhHHHHH
Confidence 444444566778888775
No 275
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=96.83 E-value=0.0067 Score=54.47 Aligned_cols=113 Identities=17% Similarity=0.124 Sum_probs=65.9
Q ss_pred HHHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhhhHHHHhhhcc-
Q 011781 352 HYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSI- 430 (477)
Q Consensus 352 ~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~~~~l~~~- 430 (477)
.+.+..|-|. +++.+|++..+...+.....++..+| ++.|.+.|++|.+ . .+.++.+...++..+...
T Consensus 18 ~Y~Fs~yS~~-Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~--------~-~l~iG~~~~~~GY~~~~l~ 86 (250)
T PF06813_consen 18 TYTFSAYSPQ-LKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPW--------V-VLLIGAVLGFVGYGLLWLA 86 (250)
T ss_pred ccchhhhhHH-HHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchH--------H-HHHHHHHHHHHHHHHHHHH
Confidence 3444445554 45679999999999988888988775 8889999999876 3 333333333333332221
Q ss_pred -cC---CCchHHHHHHHHHHHHhhhhh-hhhhhHhhhccCccchhhhhhhc
Q 011781 431 -DL---GLPHWEIVGILTAGLALSSFA-LSGLYCTHQDISPEYASILLYLE 476 (477)
Q Consensus 431 -~~---~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~p~~~g~~~gl~ 476 (477)
.. ..+.|.......++....+.. ........ +..|++||++.|+.
T Consensus 87 ~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~-~NFP~~RG~vvgil 136 (250)
T PF06813_consen 87 VSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCV-RNFPRSRGTVVGIL 136 (250)
T ss_pred HhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHH-HhCccccCceehhh
Confidence 11 123444433333333333332 33333333 44478999999874
No 276
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=96.76 E-value=0.00034 Score=70.61 Aligned_cols=153 Identities=21% Similarity=0.241 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHhHHh-hhhhhCCCcchhhHHHHHHHH-HHHHhhhhhhhhhhhhcC--hhHHHHHHHH
Q 011781 113 YKLIGTTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFW-GYALSQLPGGWLAKIFGG--RKVLQTGVLI 188 (477)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~-~~~~~~~~~g~l~dr~g~--r~~~~~~~~~ 188 (477)
++.+....++..........+..+.|- +..+|+.++.+++++.++..+ +.++|.+++|.+..|+.. |..+....+.
T Consensus 304 Np~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~ 383 (539)
T PF03137_consen 304 NPVFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVV 383 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHH
Confidence 345556666666677777777778776 667899999999999887666 556888999999999754 3333333222
Q ss_pred HHHHHHH---HHHh-h----------c---------------------------------------hHHHHHHHHHHHHh
Q 011781 189 WSLATAL---LPLL-A----------G---------------------------------------FMPGLVLSRVLVGI 215 (477)
Q Consensus 189 ~~~~~~~---~~~~-~----------~---------------------------------------~~~~~~~~~~l~g~ 215 (477)
..+..++ ..+. . + .+..+++..++.-+
T Consensus 384 ~~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~ 463 (539)
T PF03137_consen 384 SIVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSF 463 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHH
Confidence 2222211 0000 0 0 01123334444444
Q ss_pred hccchhhhHHHHhhhhcCCcchhhHHHHHHhhhh-hHHHHHHhhhHHhhcc
Q 011781 216 GEGVSPSAATDLIARSIPLEERSRAVSFVFGGLS-FGSVAGLLLAPPIIEN 265 (477)
Q Consensus 216 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~-~g~~ig~~~~~~l~~~ 265 (477)
..+.........+-+.+++++|+.++|+...... +|.+-||++.|.++|.
T Consensus 464 ~~~~~~~p~~~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~ 514 (539)
T PF03137_consen 464 FTFMSQVPSTLITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDS 514 (539)
T ss_dssp ---------------------------------------------------
T ss_pred HHHhcccchheeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhh
Confidence 4455555556666788899999999999877665 7889999999999886
No 277
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.73 E-value=0.062 Score=52.62 Aligned_cols=143 Identities=17% Similarity=0.168 Sum_probs=92.4
Q ss_pred HHHHHHHHHHhhhhHHHHhHHh---hhhhhCCCcch-hhHHHHHHHHHHHHhhhhhhhhhh---hhcChhHHHHHHHHHH
Q 011781 118 TTSLAFVICNMDKVNLSVAIIP---MSHRFGWNSSV-AGLVQSSFFWGYALSQLPGGWLAK---IFGGRKVLQTGVLIWS 190 (477)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~g~s~~~-~g~~~~~~~~~~~~~~~~~g~l~d---r~g~r~~~~~~~~~~~ 190 (477)
.+....+..++..+.+....|. +....+.+... .+...-...++..++..+.+.+.+ ++|+++.+.++..+..
T Consensus 244 ~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~ 323 (461)
T KOG3098|consen 244 LLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHL 323 (461)
T ss_pred HHHHHHHHHHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHH
Confidence 3444444555555555555555 22233433332 233333444555555566666665 4788998888877766
Q ss_pred HHHHHHHHhh-----------------chHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHH
Q 011781 191 LATALLPLLA-----------------GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSV 253 (477)
Q Consensus 191 ~~~~~~~~~~-----------------~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ 253 (477)
++.++..... ++.....+..++.|++-+......+.++...+ +++|..+.++...-..++..
T Consensus 324 ~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~ 402 (461)
T KOG3098|consen 324 IGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASC 402 (461)
T ss_pred HHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHH
Confidence 6665542211 12346778889999999999999999999999 48899999998888888877
Q ss_pred HHHhhhHH
Q 011781 254 AGLLLAPP 261 (477)
Q Consensus 254 ig~~~~~~ 261 (477)
++-.....
T Consensus 403 v~~f~~~~ 410 (461)
T KOG3098|consen 403 VAFFFSPY 410 (461)
T ss_pred HHhhhhhh
Confidence 76555443
No 278
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=96.62 E-value=0.02 Score=56.36 Aligned_cols=107 Identities=17% Similarity=0.005 Sum_probs=70.6
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhhcCh--hHHHHHHHHHHH--HHHHHHHhh---------chHHHHHHHHHHHHhhcc
Q 011781 152 GLVQSSFFWGYALSQLPGGWLAKIFGGR--KVLQTGVLIWSL--ATALLPLLA---------GFMPGLVLSRVLVGIGEG 218 (477)
Q Consensus 152 g~~~~~~~~~~~~~~~~~g~l~dr~g~r--~~~~~~~~~~~~--~~~~~~~~~---------~~~~~~~~~~~l~g~~~~ 218 (477)
-.+..++.++-.+|..+..+..= -++| ++++.+ ++-.+ -.++++... ++-+..++..++.|+..|
T Consensus 310 ~i~~~~fNvgD~vGR~~~~~~~~-p~~~~~~l~i~s-~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnG 387 (437)
T TIGR00939 310 IICFLLFNLFDWLGRSLTSKFMW-PDEDSRWLPILS-FLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNG 387 (437)
T ss_pred HHHHHHHHHHHHHHhhhhheeEe-eCCCccchHHHH-HHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhh
Confidence 45666778888888775544311 1222 333322 22211 111221111 233567778999999999
Q ss_pred chhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhH
Q 011781 219 VSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAP 260 (477)
Q Consensus 219 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~ 260 (477)
......+.+..+..++++|..+-.+...+..+|..+|..++-
T Consensus 388 y~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~ 429 (437)
T TIGR00939 388 YLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSF 429 (437)
T ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999888888888888887654
No 279
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=96.57 E-value=0.00095 Score=58.53 Aligned_cols=65 Identities=11% Similarity=0.040 Sum_probs=51.4
Q ss_pred HHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhh---------hhhhhcChhHH
Q 011781 118 TTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGW---------LAKIFGGRKVL 182 (477)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~---------l~dr~g~r~~~ 182 (477)
...++.+.+-...+.+..++-.+.++.|.++.....++.+..+.-.+..++.|. -.||+|||+.+
T Consensus 21 ~yGvGHmlNDitAScWFTYlllfltqiglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~~~w 94 (412)
T KOG4830|consen 21 AYGVGHMLNDITASCWFTYLLLFLTQIGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRRMSW 94 (412)
T ss_pred eechhHHHhhHHHHHHHHHHHHHHHHhcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhhcceeee
Confidence 345566677777777777777888889999999889998999998888888763 45689998764
No 280
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.53 E-value=0.0084 Score=61.47 Aligned_cols=152 Identities=17% Similarity=0.193 Sum_probs=100.0
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHhHHh-hhhhhCCCcchhhHHHHHHHHH-HHHhhhhhhhhhhhhcC--hhHHHHHHHHH
Q 011781 114 KLIGTTSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWG-YALSQLPGGWLAKIFGG--RKVLQTGVLIW 189 (477)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~-~~~~~~~~g~l~dr~g~--r~~~~~~~~~~ 189 (477)
+++....++..+.......+..++|- +.+++|.+...+..+.+...+. .++|.+++|.+..|+.. |......++..
T Consensus 392 ~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~ 471 (735)
T KOG3626|consen 392 PIFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCS 471 (735)
T ss_pred chHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHH
Confidence 34556666666777777777778777 6678999999999999766664 45788899999998754 33333333322
Q ss_pred HHHHHH---HHHh-------------------------------------------------------------------
Q 011781 190 SLATAL---LPLL------------------------------------------------------------------- 199 (477)
Q Consensus 190 ~~~~~~---~~~~------------------------------------------------------------------- 199 (477)
.+..++ ..+.
T Consensus 472 ~l~l~~~~~~~~igC~~~~~aG~~~~y~~~~~~~~~~~~~s~Cn~~C~C~~~~~~PVCg~~G~tY~SpChAGC~~~~~~~ 551 (735)
T KOG3626|consen 472 VLSLLFYSLLFFIGCESSPVAGVTNSYEGSPAFTSHENPFSSCNSDCSCDTSEYEPVCGENGITYFSPCHAGCTESSGTS 551 (735)
T ss_pred HHHHHHHHHHHEecCCCCcccceecCCCCCCccccCCCchhhhhcCCCCCCcCcCcccCCCCCEEeChhhhCCcccccCC
Confidence 222222 1000
Q ss_pred -----------hc-----h---------------HHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhh
Q 011781 200 -----------AG-----F---------------MPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGL 248 (477)
Q Consensus 200 -----------~~-----~---------------~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~ 248 (477)
.+ + +..+++..++..+..+...+..+.++-+.+++++|..++|+..+..
T Consensus 552 ~~~~~ytnCsCv~~~~~~~~~a~~G~C~~~c~~~~~~Fl~~~~~~sf~~~~~~~p~~~i~LR~V~~e~ks~AlG~~~~~i 631 (735)
T KOG3626|consen 552 DGNTIYTNCSCVPTNKNGNGSAKKGYCPNDCCRQFLIFLALFAIGSFIGALGAVPGMLIVLRCVPPEEKSFALGFQWMLI 631 (735)
T ss_pred CCceeeccccccccccCCCceeecCCCCCCcchhhHHHHHHHHHHHHHHHhccCcceEEEEEccCchhchhhhHHHHHHH
Confidence 00 0 0113333344444444445666667778889999999999987776
Q ss_pred h-hHHHHHHhhhHHhhcc
Q 011781 249 S-FGSVAGLLLAPPIIEN 265 (477)
Q Consensus 249 ~-~g~~ig~~~~~~l~~~ 265 (477)
. +|.+-+|++.|+++|.
T Consensus 632 rllg~IPsPIifG~~ID~ 649 (735)
T KOG3626|consen 632 RLLGFIPSPIIFGAVIDT 649 (735)
T ss_pred HHHhcCCchHhhhhhHhh
Confidence 5 7888999999999874
No 281
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=95.96 E-value=0.27 Score=46.20 Aligned_cols=54 Identities=19% Similarity=0.269 Sum_probs=45.0
Q ss_pred HhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhhhHHHHh
Q 011781 365 EELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMT 426 (477)
Q Consensus 365 ~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~~~~ 426 (477)
+.+|++..+++.++....+..++...+.|.++||+||| +.++....+....++.
T Consensus 62 ~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk--------~~cl~~cily~~scl~ 115 (354)
T PF05631_consen 62 ESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRK--------KACLLFCILYSLSCLT 115 (354)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCch--------HHHHHHHHHHHHHHHH
Confidence 35899999999999999999999999999999999987 6666666666565553
No 282
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=95.78 E-value=0.067 Score=51.51 Aligned_cols=121 Identities=12% Similarity=-0.032 Sum_probs=80.6
Q ss_pred hhHHHHhHHhhhhhh---CCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHH--HHHHHHHHHHHHHhhchHH
Q 011781 130 KVNLSVAIIPMSHRF---GWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTG--VLIWSLATALLPLLAGFMP 204 (477)
Q Consensus 130 ~~~~~~~~~~~~~~~---g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~--~~~~~~~~~~~~~~~~~~~ 204 (477)
...+..+...+-++. +-....-|.+-++..+...++.+..|.+-.+..+..-+.++ .++.+...+++ ...+++|
T Consensus 263 y~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm-~~t~~Iw 341 (412)
T PF01770_consen 263 YYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLM-SFTGNIW 341 (412)
T ss_pred HHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHH-HHhhHHH
Confidence 333334444433443 22334458888888888889999999986555554333333 22333333344 5778889
Q ss_pred HHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhH
Q 011781 205 GLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFG 251 (477)
Q Consensus 205 ~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g 251 (477)
..+++-++.+.......+....-++.....+.-|..+|+......+-
T Consensus 342 v~Y~~yIif~~~y~fliTiA~~qIA~~l~~e~yaLVFGiNtf~Al~L 388 (412)
T PF01770_consen 342 VCYAGYIIFRSLYMFLITIASFQIAKNLSEERYALVFGINTFVALVL 388 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccccceeeeeeeHHHHHHHH
Confidence 99999999988888888888888888888788888888776654433
No 283
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=95.72 E-value=0.044 Score=39.76 Aligned_cols=51 Identities=18% Similarity=0.326 Sum_probs=42.7
Q ss_pred HHHHHHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHH
Q 011781 349 SWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLI 400 (477)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g 400 (477)
+.+-+.+...+|...+| .++|..+.|++.+...++.++|.+...++.++..
T Consensus 5 GigRFayTplLP~M~~~-~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~ 55 (85)
T PF06779_consen 5 GIGRFAYTPLLPLMQAD-GGLSLSQAGWLASANYLGYLVGALLASRLPRHSR 55 (85)
T ss_pred hhHHHHHHhHhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 34556677788887765 7999999999999999999999999998887743
No 284
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=94.32 E-value=0.75 Score=43.33 Aligned_cols=166 Identities=13% Similarity=0.028 Sum_probs=96.4
Q ss_pred HHHHHHHHHHHHhhhhHHHHhHHhhhhhhCCC-cchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHH---
Q 011781 116 IGTTSLAFVICNMDKVNLSVAIIPMSHRFGWN-SSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSL--- 191 (477)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s-~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~--- 191 (477)
.+.+.+++++...+.-++......++.+++-+ -...+....+-.....+..++.|...|+..|+|++...+.+--+
T Consensus 29 ~i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlSv~ 108 (503)
T KOG2601|consen 29 VIFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQNLSVI 108 (503)
T ss_pred eehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHHhhccHHHH
Confidence 34566777888888888888888877777643 33344444445555667778888999999999988766543222
Q ss_pred ---HHHHHHHhhc-----hHHHHHHHHHHHHhhccchh--hhHHHH--hhhhc----CCcchh---hHHHHHHhhhhhHH
Q 011781 192 ---ATALLPLLAG-----FMPGLVLSRVLVGIGEGVSP--SAATDL--IARSI----PLEERS---RAVSFVFGGLSFGS 252 (477)
Q Consensus 192 ---~~~~~~~~~~-----~~~~~~~~~~l~g~~~~~~~--~~~~~~--i~~~~----~~~~r~---~~~~~~~~~~~~g~ 252 (477)
+.++..+..+ +...+..+.++.-...+... .....+ --||. ..+.+. +.++.....-..-.
T Consensus 109 vagglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A~~i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq~tn 188 (503)
T KOG2601|consen 109 VAGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLAGTILIERDWVVVMSEGESPSVLTNMNATIRGIDQSTN 188 (503)
T ss_pred HHHHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHhhheEEecccEEEEecCCCCHHHHhhcchhhhhhhhhhh
Confidence 2222222222 23344444333332211111 111111 11222 223333 34466777777888
Q ss_pred HHHHhhhHHhhcccChhHHHHHHHHHHHH
Q 011781 253 VAGLLLAPPIIENLGWESVFYIFGLLGIA 281 (477)
Q Consensus 253 ~ig~~~~~~l~~~~g~~~~~~~~~~~~~~ 281 (477)
.+.|.+.|.+.+..+-|..-.+.++-.++
T Consensus 189 ~Lapv~tg~Iitfvsl~~~~g~f~~w~~v 217 (503)
T KOG2601|consen 189 LLAPVITGLIITFVSLRASAGTFAAWALV 217 (503)
T ss_pred chhhhhhcccceeechhhhhhhhHHHHHH
Confidence 99999999999888877755555555444
No 285
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=93.97 E-value=0.019 Score=53.97 Aligned_cols=107 Identities=21% Similarity=0.161 Sum_probs=3.8
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhh-hcChhHHHHHHHHHH--HHHHHHHHh----------hchHHHHHHHHHHHHhhccc
Q 011781 153 LVQSSFFWGYALSQLPGGWLAKI-FGGRKVLQTGVLIWS--LATALLPLL----------AGFMPGLVLSRVLVGIGEGV 219 (477)
Q Consensus 153 ~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~--~~~~~~~~~----------~~~~~~~~~~~~l~g~~~~~ 219 (477)
.+..++.++-.+|..+.++..-+ ..+|+++..+ ++-. +..++++.. -++-+..++..++.|+..|-
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s-~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGy 264 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLWILS-LLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGY 264 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHHHHH-HHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccch
Confidence 35667888888888877764321 1344444332 2211 222222111 12225667788999999999
Q ss_pred hhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhH
Q 011781 220 SPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAP 260 (477)
Q Consensus 220 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~ 260 (477)
.....+.+..+..++++|..+-.+...+..+|..+|..++-
T Consensus 265 l~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~ 305 (309)
T PF01733_consen 265 LSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSF 305 (309)
T ss_dssp --HHHH-----------------------------------
T ss_pred hhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999988888888888888888776653
No 286
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=93.45 E-value=1.4 Score=36.40 Aligned_cols=89 Identities=7% Similarity=-0.148 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHHHHHhhhhchhHHHhcCcccceehhhhhHHhhhhhHHHHhhhcccCCCchHHHHHHHHHHHHhhhhhhh
Q 011781 376 WVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALS 455 (477)
Q Consensus 376 ~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~r~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 455 (477)
.-.++......++.++.+.+.+++|.| +.+ +++.+.-.+...... .++.+.++....+.|++.+..+..
T Consensus 41 ~slai~Y~~~~~s~l~~P~iv~~lg~K--------~sm-~lg~~~y~~y~~~~~--~~~~~~l~~~s~l~G~~~a~lW~a 109 (156)
T PF05978_consen 41 YSLAILYGSFAISCLFAPSIVNKLGPK--------WSM-ILGSLGYAIYIASFF--YPNSYTLYPASALLGFGAALLWTA 109 (156)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhhH--------HHH-HHHHHHHHHHHHHHH--hhhHHHHHHHHHHHhhhhHHhhHh
Confidence 345556666777778888899999876 333 333333332222222 223445566667778877666665
Q ss_pred hhhHhhhccCccchhhhhhh
Q 011781 456 GLYCTHQDISPEYASILLYL 475 (477)
Q Consensus 456 ~~~~~~~~~~p~~~g~~~gl 475 (477)
....+.+...++.+++-.|+
T Consensus 110 qg~ylt~~s~~~~~~~~~~i 129 (156)
T PF05978_consen 110 QGTYLTSYSTEETIGRNTGI 129 (156)
T ss_pred hhHHHHHcCCHHHHhhHHHH
Confidence 55555555556668777664
No 287
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=93.02 E-value=0.47 Score=46.60 Aligned_cols=65 Identities=11% Similarity=-0.004 Sum_probs=50.0
Q ss_pred HHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChh
Q 011781 205 GLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWE 269 (477)
Q Consensus 205 ~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~ 269 (477)
.+++.-++..+..-..+.+..+.-+++.+|.--|++|.+.++..++|+---..+.-++.|.+.++
T Consensus 407 lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~fT~~ 471 (544)
T PF13000_consen 407 LVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDYFTVA 471 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhhcccc
Confidence 44555566667777788889999999999999999999999999999766555555555555544
No 288
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=92.47 E-value=2.1 Score=38.60 Aligned_cols=135 Identities=16% Similarity=0.013 Sum_probs=83.1
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhhcCh--hHHHHHHHHHHHHHHHHHHhh---c---hHHHHHHHHHHHHhhccchhh
Q 011781 151 AGLVQSSFFWGYALSQLPGGWLAKIFGGR--KVLQTGVLIWSLATALLPLLA---G---FMPGLVLSRVLVGIGEGVSPS 222 (477)
Q Consensus 151 ~g~~~~~~~~~~~~~~~~~g~l~dr~g~r--~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~l~g~~~~~~~~ 222 (477)
-|.+++.+.++.++|+-+..++..|-..| ..+.+..++..+...+..... + +...-++...+.-.+.|..+|
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwP 363 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWP 363 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcch
Confidence 48899999999999999998888775544 344444444333333221111 1 122234455556667789999
Q ss_pred hHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHHHHHHHHHHHHHH
Q 011781 223 AATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSG 285 (477)
Q Consensus 223 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~ 285 (477)
..+.+-.+..|++.|...+.++..-.++-.-++-..--.-....+-|..|-++.+...+..+.
T Consensus 364 SimkmRsqyIPEearstimNfFRvPLnifvClvLynlh~~~~p~~tr~mf~icS~~~~~a~i~ 426 (454)
T KOG4332|consen 364 SIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFGICSAFLFVASIL 426 (454)
T ss_pred HHHHHHHhhCCHHHHhhhhhheechhhHhhhhhheecccccCccccchhhhhhHHHHHHHHHH
Confidence 999999999999999988888766554433332211000001134567777777766655443
No 289
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=92.44 E-value=13 Score=37.19 Aligned_cols=77 Identities=21% Similarity=0.178 Sum_probs=58.7
Q ss_pred HHHHHHHHHhhccchhhhHHHHhhhhcC-CcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHHHHHHHHHHH
Q 011781 206 LVLSRVLVGIGEGVSPSAATDLIARSIP-LEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAW 282 (477)
Q Consensus 206 ~~~~~~l~g~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~~~~~~~~~ 282 (477)
+.+..++.|+.........-..+.+.+| +++|...+|.++...++..++..++++.+.+.+||.....+.-++.++.
T Consensus 269 ia~~vi~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~~~a~i~Pii~lit 346 (472)
T TIGR00769 269 LALLVIAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWLTAALITPLVMLLT 346 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 3444556667767777777777888775 4568999999999888888777777799999999998887766665553
No 290
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=92.23 E-value=0.71 Score=48.06 Aligned_cols=52 Identities=19% Similarity=0.162 Sum_probs=43.1
Q ss_pred HHHHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhc
Q 011781 351 GHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIAT 402 (477)
Q Consensus 351 ~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~ 402 (477)
+++++...+..|+.+.+|++...+..++..+....-+..+++|+++|++-.+
T Consensus 2 syYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~ 53 (654)
T TIGR00926 2 SYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGK 53 (654)
T ss_pred ceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 3456677788888888999999888888888888888899999999987555
No 291
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=91.94 E-value=0.95 Score=41.53 Aligned_cols=65 Identities=22% Similarity=0.085 Sum_probs=55.3
Q ss_pred HhhchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHh
Q 011781 198 LLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPI 262 (477)
Q Consensus 198 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l 262 (477)
.+.++++...+..+.-|+-.|..+....--+.+-.++++|..+++.....-.+|..++.+++-.+
T Consensus 337 ~ftpsi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 337 WFTPSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred HhccHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 35677788888889999998999999888899888899999999999999999988887776433
No 292
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=91.77 E-value=1.2 Score=43.33 Aligned_cols=129 Identities=19% Similarity=0.063 Sum_probs=82.0
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhhccchhhhHHHHhhhh
Q 011781 152 GLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARS 231 (477)
Q Consensus 152 g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~ 231 (477)
.|-+.++.+...+.+....++.+|+|-|+.+..+...+.++..+.+ ...+.+.....+-..|+-.+......+..++.+
T Consensus 335 ~~GL~ins~~lgi~S~~~~~l~~~~g~r~~y~~~~~~f~~~~~~~g-l~~~~~~~~~~~~~~G~~~~~~~~~p~~l~~~y 413 (498)
T KOG0637|consen 335 CLGLMLNSIVLGIYSLLVEKLSRKFGTRKRYWGGVNAFGLATGLAG-LVLNTYVVLSHRSTAGILSSPLLTVPYGALALY 413 (498)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCcceEEeehhHHHHHHHHHHh-hhhhHHHHHHHHhhcceeecchhcccHHHHHHH
Confidence 4566678888889999999999999977766666565566665554 334445666666777755555444444444333
Q ss_pred cCC-----------------------cchhhHHHHHHhhhhhHHHHHHhhhHHhhcccC-hhHHHHHHHHHHHH
Q 011781 232 IPL-----------------------EERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG-WESVFYIFGLLGIA 281 (477)
Q Consensus 232 ~~~-----------------------~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g-~~~~~~~~~~~~~~ 281 (477)
... ..+|...|+.+....+..++.....|.+.+.+| -+.+-+..+..++.
T Consensus 414 ~~~g~~~a~t~~~pf~~~s~~~~~sg~g~G~~~gvln~~I~ipQvivs~~~Gp~~~~~G~~~~~~~~~~a~s~~ 487 (498)
T KOG0637|consen 414 AILGIPLAITFSIPFALASIEIGNSGLGQGLDLGVLNCAIVIPQVLVSLGLGPLDQLFGGGNLPAFVSGAVALL 487 (498)
T ss_pred HHhCCccccccccccccccccccCccCCCCceeeeeeeeeeehhheeeccccchhhhcCCcchhHHHHHHHHHH
Confidence 211 123556677888888888888888888777765 34444444444433
No 293
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=91.35 E-value=0.4 Score=45.99 Aligned_cols=109 Identities=18% Similarity=0.057 Sum_probs=68.8
Q ss_pred hhhHHHHH-HHHHHHHhhhhhhhhhhhhcChhHHHHHHH-HHHHHHHHHHH------hhchHHHHHHHHHHHHhhccchh
Q 011781 150 VAGLVQSS-FFWGYALSQLPGGWLAKIFGGRKVLQTGVL-IWSLATALLPL------LAGFMPGLVLSRVLVGIGEGVSP 221 (477)
Q Consensus 150 ~~g~~~~~-~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~-~~~~~~~~~~~------~~~~~~~~~~~~~l~g~~~~~~~ 221 (477)
..-+...+ +.+.-.+|.+.+.++-++- ||+..+...+ +..+-.+.++. .-.+-+.+++...+.|+..|-..
T Consensus 283 y~~~~~~l~fN~~d~vG~~~a~~~~~~~-~r~l~i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGYlt 361 (406)
T KOG1479|consen 283 YALLLVFLSFNVFDLIGSILAALLTWPD-PRKLTIPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGYLT 361 (406)
T ss_pred hHHHHHHHHhHHHHHhhhhhhhcccCCC-CceehHHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccchHh
Confidence 33444555 7778888877766665543 3433333221 22222222111 12233677889999999999999
Q ss_pred hhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhh
Q 011781 222 SAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLA 259 (477)
Q Consensus 222 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~ 259 (477)
...+.+..+..+++++..+-.+.......|.+.|..++
T Consensus 362 sl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s 399 (406)
T KOG1479|consen 362 SLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLS 399 (406)
T ss_pred hheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 99999999999888877776666666666666665554
No 294
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=90.87 E-value=3.4 Score=37.09 Aligned_cols=101 Identities=14% Similarity=0.140 Sum_probs=51.5
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhh-hcChhHHH----HHHHHHHHHHHHHHHhh-c---hHHHHHHHHHHHHhhccchhh
Q 011781 152 GLVQSSFFWGYALSQLPGGWLAKI-FGGRKVLQ----TGVLIWSLATALLPLLA-G---FMPGLVLSRVLVGIGEGVSPS 222 (477)
Q Consensus 152 g~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~----~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~l~g~~~~~~~~ 222 (477)
....-++..+..+|.+..|++... +.||+.+. .+.+++.+..++..... + ....+++..++.|++.=+..+
T Consensus 144 ~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~ 223 (267)
T PF07672_consen 144 PIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQG 223 (267)
T ss_pred HHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhH
Confidence 445556777777888888888764 45555443 22333333332211111 1 244577777888877655554
Q ss_pred hHHHHhhhh--cCCcchhhHHHHHHhhhhhHH
Q 011781 223 AATDLIARS--IPLEERSRAVSFVFGGLSFGS 252 (477)
Q Consensus 223 ~~~~~i~~~--~~~~~r~~~~~~~~~~~~~g~ 252 (477)
+...+-.|. .+|++-|..+|+.-..+.+..
T Consensus 224 ViL~lPhEyK~~~pk~ig~~Fg~iWGfGY~~y 255 (267)
T PF07672_consen 224 VILNLPHEYKGYNPKKIGIQFGLIWGFGYIFY 255 (267)
T ss_pred HHhcChhhhcCCCcceehhHHHHHHHHHHHHH
Confidence 444333332 134444555554443333333
No 295
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=90.33 E-value=16 Score=34.40 Aligned_cols=164 Identities=17% Similarity=0.148 Sum_probs=94.4
Q ss_pred HHHHhhhhHHHHhHHhhhhh-hCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHH----HHHHH---HHHHHHHH
Q 011781 124 VICNMDKVNLSVAIIPMSHR-FGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVL----QTGVL---IWSLATAL 195 (477)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~----~~~~~---~~~~~~~~ 195 (477)
+.+..+.-.+-..+..+... +|-+..+.+.+.+.+...+.+|+...-++.|.--.-+.+ .++++ -..+..+.
T Consensus 17 f~~aa~GlvyElal~tLatyLlG~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~ 96 (508)
T COG4262 17 FVCAACGLVYELALGTLATYLLGGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLL 96 (508)
T ss_pred HHHHHhHHHHHHHHHHHHHHhcCCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHH
Confidence 33444444444454444444 466778889999999999999998888777642222111 11111 11111112
Q ss_pred HHHh-hchHHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhh-cccChhHHHH
Q 011781 196 LPLL-AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPII-ENLGWESVFY 273 (477)
Q Consensus 196 ~~~~-~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~-~~~g~~~~~~ 273 (477)
++.. .++-+.+++.-++.|.-.|.-.|..+.++.... .+.....+.....-.+|+..|.++-.++. ...|.--.-.
T Consensus 97 FA~~~~~~~~Vly~lt~vIG~LVG~EiPL~mrml~~r~--a~~k~~~s~vl~~DYLGal~~gLl~p~lllP~LGl~rta~ 174 (508)
T COG4262 97 FALESAPSRLVLYALTAVIGVLVGAEIPLLMRMLQRRQ--AKAKDLGSRVLTLDYLGALAGGLLWPFLLLPRLGLVRTAA 174 (508)
T ss_pred HHhccchHHHHHHHHHHHHHHHHhcchHHHHHHHHHHH--HHHHhhhhhhhhhHhhhhhhHHHHHHHHHhhhhccHHHHH
Confidence 2111 124467788889999988999999998888733 12222333344447788887777766554 4456444445
Q ss_pred HHHHHHHHHHHHHHHh
Q 011781 274 IFGLLGIAWFSGFKIL 289 (477)
Q Consensus 274 ~~~~~~~~~~~~~~~~ 289 (477)
..|++.++..+...++
T Consensus 175 laG~~Nl~aAvv~~fl 190 (508)
T COG4262 175 LAGLCNLAAAVVTLFL 190 (508)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 5566666655444333
No 296
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=89.70 E-value=4.3 Score=37.10 Aligned_cols=51 Identities=18% Similarity=0.012 Sum_probs=36.6
Q ss_pred HHHHHhhhhhHHHHHhhCCch--hhhHHHHHHHHHHHHHHHHhhhhchhHHHhc
Q 011781 351 GHYTCLSWLPTYFSEELSLNL--TEAAWVSILPPLASVLVTSIAAQFADNLIAT 402 (477)
Q Consensus 351 ~~~~~~~~~~~~~~~~~g~~~--~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~ 402 (477)
.........+.+..+ .+.+. ...++......+...++.++.|++.||+|+|
T Consensus 17 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~ 69 (338)
T COG0477 17 DLGLLSPALPLLLST-LSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRR 69 (338)
T ss_pred hcchHHHHHHHHHHH-cCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccch
Confidence 334444555666654 44444 4678888888999999989999999999765
No 297
>PRK00293 dipZ thiol:disulfide interchange protein precursor; Provisional
Probab=89.64 E-value=19 Score=37.12 Aligned_cols=31 Identities=19% Similarity=0.144 Sum_probs=18.6
Q ss_pred CchhhhHHHHHHHHHHHHHHHHhhhhchhHH
Q 011781 369 LNLTEAAWVSILPPLASVLVTSIAAQFADNL 399 (477)
Q Consensus 369 ~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~ 399 (477)
-++...+..+..++++..+--++.+....|+
T Consensus 322 g~~~~g~~~l~~~gLG~~~Plll~~~~~~~~ 352 (571)
T PRK00293 322 GDLLLGGLTLYLLALGMGLPLILITTFGNKL 352 (571)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3455556667777777755555555555444
No 298
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=87.76 E-value=15 Score=33.08 Aligned_cols=18 Identities=11% Similarity=-0.040 Sum_probs=8.4
Q ss_pred HHHHHHHhhhhhHHHHHh
Q 011781 349 SWGHYTCLSWLPTYFSEE 366 (477)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~ 366 (477)
....++....=..|++++
T Consensus 191 aGvlyGs~fvPv~Yi~~~ 208 (254)
T PF07857_consen 191 AGVLYGSNFVPVIYIQDH 208 (254)
T ss_pred HHHHHhcccchHHHHHhC
Confidence 334444444444556554
No 299
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=87.30 E-value=11 Score=35.54 Aligned_cols=132 Identities=17% Similarity=0.099 Sum_probs=84.2
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhhcChh--HHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhhccchhhhHHHHhh
Q 011781 152 GLVQSSFFWGYALSQLPGGWLAKIFGGRK--VLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIA 229 (477)
Q Consensus 152 g~~~~~~~~~~~~~~~~~g~l~dr~g~r~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~ 229 (477)
|..-++..+..+++.+..|.+--+..|.. .+.++.+..+...+++ .-++++|..+++.++...-.....+.....++
T Consensus 274 G~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m-~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA 352 (433)
T KOG3810|consen 274 GAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIM-AQTQHIWVCYAGYVLFRVIYQLTITIATFQIA 352 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhh-hcccceehhhhhHHHHHhhHhhhhhHHHHHHH
Confidence 55666777777888888888876666553 3333433433333333 46677888888888888888888888888888
Q ss_pred hhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccC-----------hhHHHHHHHHHHHHHHHHHH
Q 011781 230 RSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG-----------WESVFYIFGLLGIAWFSGFK 287 (477)
Q Consensus 230 ~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g-----------~~~~~~~~~~~~~~~~~~~~ 287 (477)
.....+.-|..+|+.....-+-.. ++.-...|..| +..-|.+.+++.++......
T Consensus 353 ~nL~~e~~gLvFGiNTFvAl~lQs---ilT~iVvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~~~ 418 (433)
T KOG3810|consen 353 RNLSSELFGLVFGINTFVALILQS---ILTLIVVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGIEY 418 (433)
T ss_pred HhhhhhhheeeeehHHHHHHHHHH---hheEEEEcccccCCCcceeEEEEeehHHHHHHHHHHHHHHHH
Confidence 888888888888887665443333 23323334221 33456666666666544433
No 300
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=84.37 E-value=0.33 Score=45.64 Aligned_cols=42 Identities=19% Similarity=0.321 Sum_probs=2.4
Q ss_pred CchHHHHHHHHHHHHhhhhhhhhhhHhhhccCccc---hhhhhhh
Q 011781 434 LPHWEIVGILTAGLALSSFALSGLYCTHQDISPEY---ASILLYL 475 (477)
Q Consensus 434 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~---~g~~~gl 475 (477)
+..+.++..+++|+..|...........+.+.|++ .|..+++
T Consensus 247 ~d~~~~i~~~l~g~TNGyl~tl~m~~~p~~v~~~e~e~aG~~~~~ 291 (309)
T PF01733_consen 247 SDAWFIILMLLFGFTNGYLSTLAMMYAPKSVSPEERELAGSVMSF 291 (309)
T ss_dssp --------------------HHHH---------------------
T ss_pred chHHHHHHHHHHHHccchhhhceeeeCCCcCCHHHHHHHHHHHHH
Confidence 44555566677777766666655655666666554 4444443
No 301
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=82.08 E-value=3 Score=39.72 Aligned_cols=143 Identities=10% Similarity=-0.159 Sum_probs=85.5
Q ss_pred hhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhh------cChhHHHHHHHHHHHHH-HHHHHhhc
Q 011781 129 DKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIF------GGRKVLQTGVLIWSLAT-ALLPLLAG 201 (477)
Q Consensus 129 ~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~------g~r~~~~~~~~~~~~~~-~~~~~~~~ 201 (477)
+...-....+.-.-|.|++..+.+++.....-..++++...|++.... -|+..+-+......... .....+..
T Consensus 280 gf~a~da~t~LkLle~Gv~ke~Lal~~v~~~plqI~l~~~~gk~ta~~~pl~~~lka~~~R~~~~~~~t~Lv~~~~~~~~ 359 (510)
T KOG3574|consen 280 GFQAADALTSLKLLEHGVPKEELALIAVPLVPLQIALPLYIGKWTAGPRPLNVFLKAVPYRLGGGLVQTALVWWTPTLGH 359 (510)
T ss_pred HhhhhhhccchHHHHcCCChhHheeeeeehhhHHHhhhhhheeecCCCCcchHHHHhhhHHHHHHHHHHHHHhhhccccc
Confidence 333344445556678899999888877544444555555556555421 11211222111111111 11111111
Q ss_pred -------hHH-HHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHH
Q 011781 202 -------FMP-GLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESV 271 (477)
Q Consensus 202 -------~~~-~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~ 271 (477)
.+. ..+....+.+...-..+...++..+++.+|.--|+.|.+.+...++|+---..+..++.+.++|.-+
T Consensus 360 ~~G~~~~~~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~ltv~~C 437 (510)
T KOG3574|consen 360 SDGTFPRGYYILLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADGLTVKQC 437 (510)
T ss_pred CCCceeechHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcccCceeec
Confidence 111 2233345555555566778888999999999999999999999999988888888888888777643
No 302
>PRK03612 spermidine synthase; Provisional
Probab=81.74 E-value=64 Score=32.85 Aligned_cols=32 Identities=13% Similarity=-0.142 Sum_probs=25.7
Q ss_pred hhhhHHHHHHHHHHHHHHHHhhhhc-hhHHHhc
Q 011781 371 LTEAAWVSILPPLASVLVTSIAAQF-ADNLIAT 402 (477)
Q Consensus 371 ~~~~g~~~~~~~~~~~~~~~~~g~l-~dr~g~~ 402 (477)
....|.+++...+++++|.++.+++ ...+|-.
T Consensus 144 g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~ 176 (521)
T PRK03612 144 GHNVATVLAADYLGALVGGLAFPFLLLPRLGLI 176 (521)
T ss_pred hhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchH
Confidence 3567889999999999999999865 4477754
No 303
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=81.34 E-value=64 Score=32.53 Aligned_cols=78 Identities=14% Similarity=0.166 Sum_probs=56.0
Q ss_pred HHHHHHHHHhhccchhhhHHHHhhhhcC-CcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHHHHHHHHHHHH
Q 011781 206 LVLSRVLVGIGEGVSPSAATDLIARSIP-LEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWF 283 (477)
Q Consensus 206 ~~~~~~l~g~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~~~~~~~~~~ 283 (477)
+.+..+..|+.........-..+.+.+| ++++...+|-++...++-.++-.++++.+.+.+||+..-.+.=++.++..
T Consensus 285 Ia~lvi~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~GW~~~AlitPiv~lit~ 363 (491)
T PF03219_consen 285 IALLVIAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWRTAALITPIVILITG 363 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhHHHHHHHH
Confidence 3344455666666666667777777775 45577888888888888777777889999999999988777544444433
No 304
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=80.20 E-value=40 Score=29.44 Aligned_cols=40 Identities=15% Similarity=0.223 Sum_probs=24.6
Q ss_pred hhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHHHHHHH
Q 011781 238 SRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLL 278 (477)
Q Consensus 238 ~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~~~~~ 278 (477)
.+.-........++.++|..+++.+.+..+.. .+++.+++
T Consensus 161 ~~~~~~~~~~~i~~f~~Ga~~ga~l~~~~~~~-al~~~~~~ 200 (209)
T PF06912_consen 161 ALRRALRYLLIILSFFIGAILGALLYRRLGFW-ALLLPALL 200 (209)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH-HHHHHHHH
Confidence 33445556666677777777788887777754 44444333
No 305
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=78.90 E-value=16 Score=37.05 Aligned_cols=27 Identities=19% Similarity=0.173 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHHHhhhhchhHHHhcCc
Q 011781 378 SILPPLASVLVTSIAAQFADNLIATGV 404 (477)
Q Consensus 378 ~~~~~~~~~~~~~~~g~l~dr~g~~~~ 404 (477)
...+.+.+.+++...+++-..++.++|
T Consensus 303 i~~y~~~~~iaGy~S~~~yk~~~g~~W 329 (521)
T PF02990_consen 303 IILYALTSFIAGYVSARLYKSFGGKKW 329 (521)
T ss_pred HHHHHHHhhHHHHHHHHHHHHcCCCce
Confidence 344445555555555556566665544
No 306
>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger.
Probab=77.15 E-value=22 Score=38.13 Aligned_cols=48 Identities=13% Similarity=0.107 Sum_probs=28.4
Q ss_pred HHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHH
Q 011781 133 LSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVL 182 (477)
Q Consensus 133 ~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~ 182 (477)
.......+...+|++...+|+.+.. ++..+.-++....+-|-|.-.+-
T Consensus 952 lV~~at~IG~vlGIse~VmGlTfLA--~GTSIPDlisSvivArkG~gdMA 999 (1096)
T TIGR00927 952 MVWWAHQVGETIGISEEIMGLTILA--AGTSIPDLITSVIVARKGLGDMA 999 (1096)
T ss_pred HHHHHHHhhhhcCCChhhhhhhhhh--hhcccHHHHHHHHHHHccCCcce
Confidence 3334555677788888877665443 35555556666666665654443
No 307
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=75.40 E-value=10 Score=28.55 Aligned_cols=35 Identities=26% Similarity=0.227 Sum_probs=21.0
Q ss_pred HHHHHHHHhhhhhhhhhhhh-cChhHHHHHHHHHHH
Q 011781 157 SFFWGYALSQLPGGWLAKIF-GGRKVLQTGVLIWSL 191 (477)
Q Consensus 157 ~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~ 191 (477)
.-.++.++.....||+.||| |.+++.++.+++.+.
T Consensus 50 sefIsGilVGa~iG~llD~~agTsPwglIv~lllGf 85 (116)
T COG5336 50 SEFISGILVGAGIGWLLDKFAGTSPWGLIVFLLLGF 85 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence 33444555556678999986 666665555444433
No 308
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=75.36 E-value=26 Score=33.23 Aligned_cols=16 Identities=31% Similarity=0.191 Sum_probs=11.7
Q ss_pred hhhhcChhHHHHHHHH
Q 011781 173 AKIFGGRKVLQTGVLI 188 (477)
Q Consensus 173 ~dr~g~r~~~~~~~~~ 188 (477)
.||+...|++.+...+
T Consensus 208 ~e~ft~sKllav~~si 223 (416)
T KOG2765|consen 208 VERFTLSKLLAVFVSI 223 (416)
T ss_pred cchhhHHHHHHHHHhh
Confidence 8999988887654433
No 309
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=75.14 E-value=1.5e+02 Score=33.37 Aligned_cols=39 Identities=15% Similarity=0.281 Sum_probs=24.2
Q ss_pred hhhhhHHHHHHhhhHHhhcccChhHHHHHHHHHHHHHHHHHH
Q 011781 246 GGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFK 287 (477)
Q Consensus 246 ~~~~~g~~ig~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 287 (477)
...++..++..++.++. ++|+...+..+.+.++.+....
T Consensus 789 vv~~~~~~~~~iiiaf~---~~W~lalv~la~~Pll~~~~~~ 827 (1228)
T KOG0055|consen 789 VVQNIAAVIIGIIIAFI---YGWRLALVVLATFPLLILSGYL 827 (1228)
T ss_pred HHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555555555543 4899999888877766554443
No 310
>TIGR00844 c_cpa1 na(+)/h(+) antiporter. This model is specific for the fungal members of this family.
Probab=74.14 E-value=1.3e+02 Score=32.21 Aligned_cols=31 Identities=10% Similarity=0.111 Sum_probs=17.6
Q ss_pred hhHHHHHHhhhHHhhcccChhHHHHHHHHHH
Q 011781 249 SFGSVAGLLLAPPIIENLGWESVFYIFGLLG 279 (477)
Q Consensus 249 ~~g~~ig~~~~~~l~~~~g~~~~~~~~~~~~ 279 (477)
.++.++..+++-+++..++|...+++.++++
T Consensus 111 ~lT~livAL~a~~Li~GL~~~~ALLLGAILA 141 (810)
T TIGR00844 111 TSGWLVIALFVWILVPGLNFPASLLMGACIT 141 (810)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHhhhc
Confidence 3444444444444444567877777766655
No 311
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=73.74 E-value=66 Score=33.17 Aligned_cols=63 Identities=16% Similarity=0.177 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcc
Q 011781 203 MPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN 265 (477)
Q Consensus 203 ~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~ 265 (477)
.++++--.++.|++.........-+.-+-+|++-|+.+++++....++|..+...+.......
T Consensus 458 i~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sMkS~~~al~l~t~a~G~~lss~Lv~~v~~~ 520 (571)
T KOG1237|consen 458 ILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESMKSVATALWLLTVAVGNYLSSVLVSLVQFS 520 (571)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 556777889999999999999999999999999999999999999999999999988665433
No 312
>KOG1307 consensus K+-dependent Ca2+/Na+ exchanger NCKX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=73.68 E-value=34 Score=33.39 Aligned_cols=41 Identities=15% Similarity=0.139 Sum_probs=22.5
Q ss_pred HHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcCh
Q 011781 137 IIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGR 179 (477)
Q Consensus 137 ~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r 179 (477)
...+-+.+|+++...|+. +...|.-+--++...+.-|-|.-
T Consensus 447 a~~iGeT~gIp~eIMGLT--iLAAGTSIPDlitSvIVARKGlG 487 (588)
T KOG1307|consen 447 ANIIGETLGIPDEIMGLT--ILAAGTSIPDLITSVIVARKGLG 487 (588)
T ss_pred HHHcccccCCCHHHhhhh--hhhcCCchHHhhHhhhhcccccc
Confidence 444666777777766654 23333334445555566665543
No 313
>PRK10263 DNA translocase FtsK; Provisional
Probab=71.93 E-value=29 Score=38.79 Aligned_cols=25 Identities=24% Similarity=0.147 Sum_probs=14.5
Q ss_pred hHHHHHHhhhHHhhcccChhHHHHH
Q 011781 250 FGSVAGLLLAPPIIENLGWESVFYI 274 (477)
Q Consensus 250 ~g~~ig~~~~~~l~~~~g~~~~~~~ 274 (477)
.|+++|..++.++...+|.....++
T Consensus 142 gGGIIG~lLs~lL~~LfG~vGa~LI 166 (1355)
T PRK10263 142 SGGVIGSLLSTTLQPLLHSSGGTIA 166 (1355)
T ss_pred ccchHHHHHHHHHHHHHhHHHHHHH
Confidence 4666666666666665555444443
No 314
>PF05255 UPF0220: Uncharacterised protein family (UPF0220); InterPro: IPR007919 This family of proteins is functionally uncharacterised.
Probab=70.67 E-value=43 Score=28.02 Aligned_cols=134 Identities=10% Similarity=0.056 Sum_probs=65.7
Q ss_pred cCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhccc------ChhHHHHHHHHHHHHHHHHHHHhccCCcCCCCCCCCcch
Q 011781 232 IPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL------GWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSN 305 (477)
Q Consensus 232 ~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (477)
++.+++.+..+.+.++.-.+...--++=+.+.... .+...+++.++++.+.+++.-.+.++.-..........
T Consensus 15 ~~~~~~~~~~~~~~AGaLF~~gwWi~iDa~v~s~~~~~~~~~~~f~~~ipgI~stlgm~mvN~V~~~~l~~~~~~~~~~- 93 (166)
T PF05255_consen 15 FDWSEKRNAIGSYVAGALFALGWWIFIDAAVYSKHANGSDVHVTFVDWIPGIFSTLGMFMVNSVSKSRLRGDSYSESGC- 93 (166)
T ss_pred CCchHhHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCCCCccccceeeehHHHHHHHHHHhccccHHHhcCCCCCCCCC-
Confidence 34445555555555554444444444444444332 47788889988888877766544332221111100000
Q ss_pred hhhhhhhhhhhHHhhccCCCCCCHHHHhhcHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHH
Q 011781 306 YINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLAS 385 (477)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~ 385 (477)
....+ -++|+++-..+.............-.|....++.+....|....+..+.-
T Consensus 94 ------------------------~~~~~-aR~~LFigf~l~fggl~~s~~vli~~yv~~~~~~~~~~~Gva~vlqN~lI 148 (166)
T PF05255_consen 94 ------------------------GGAWR-ARLWLFIGFALSFGGLAGSVWVLILKYVVPQYTKPTLWPGVANVLQNALI 148 (166)
T ss_pred ------------------------chhHH-HHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCCCcccccHHHHHHHHH
Confidence 11222 23444443333444444555555556665433445555665555555555
Q ss_pred HHHHHh
Q 011781 386 VLVTSI 391 (477)
Q Consensus 386 ~~~~~~ 391 (477)
+++.++
T Consensus 149 ~~Sslv 154 (166)
T PF05255_consen 149 FLSSLV 154 (166)
T ss_pred HHHHHH
Confidence 555543
No 315
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=70.35 E-value=82 Score=28.31 Aligned_cols=20 Identities=25% Similarity=0.448 Sum_probs=10.8
Q ss_pred hhcHHHHHHHHHHHHhHHHH
Q 011781 333 FRSKAVWAMIYAHFCGSWGH 352 (477)
Q Consensus 333 ~~~~~~~~~~l~~~~~~~~~ 352 (477)
+.+|.++..+...|+.-++-
T Consensus 204 ffspifikaFsltF~aEwGD 223 (294)
T KOG2881|consen 204 FFSPIFIKAFSLTFLAEWGD 223 (294)
T ss_pred hccHHHHHHHHHHHHHHhcc
Confidence 34566666665555544443
No 316
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=66.20 E-value=41 Score=31.07 Aligned_cols=33 Identities=27% Similarity=0.261 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhh
Q 011781 184 TGVLIWSLATALLPLLAGFMPGLVLSRVLVGIG 216 (477)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 216 (477)
.+.++++++.++..+..++.+.+.+..++.+++
T Consensus 4 ~~~~~~~~~s~~~~l~~~~~~l~~~~~~~~~F~ 36 (284)
T PF12805_consen 4 ATLLCFALASLLVGLLFPYPWLLILVLALLTFF 36 (284)
T ss_pred HHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHH
Confidence 333444444444444445445555554554444
No 317
>PF13386 DsbD_2: Cytochrome C biogenesis protein transmembrane region
Probab=61.12 E-value=1.1e+02 Score=26.44 Aligned_cols=35 Identities=17% Similarity=0.042 Sum_probs=28.3
Q ss_pred CCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhc
Q 011781 368 SLNLTEAAWVSILPPLASVLVTSIAAQFADNLIAT 402 (477)
Q Consensus 368 g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~ 402 (477)
.-|+.........++++.++..+..+.+..+.+++
T Consensus 146 s~s~~~G~l~m~~FgLGT~p~ll~~~~~~~~l~~~ 180 (199)
T PF13386_consen 146 SGSPLYGALLMLAFGLGTLPALLLAGLLAGKLSRR 180 (199)
T ss_pred cCChHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 45677778888999999988888888888877665
No 318
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=57.24 E-value=45 Score=25.28 Aligned_cols=49 Identities=14% Similarity=0.056 Sum_probs=31.5
Q ss_pred cchhhHHHHHHhhhhhHHHHHHhhhHHhhccc-C-hhHHHHHHHHHHHHHH
Q 011781 235 EERSRAVSFVFGGLSFGSVAGLLLAPPIIENL-G-WESVFYIFGLLGIAWF 283 (477)
Q Consensus 235 ~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~-g-~~~~~~~~~~~~~~~~ 283 (477)
+.++.+.++--+.-.+++++.....||+.+++ | -.|.+++..++.+++.
T Consensus 38 s~k~~~~a~klssefIsGilVGa~iG~llD~~agTsPwglIv~lllGf~AG 88 (116)
T COG5336 38 SIKGYAQAFKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLLLGFGAG 88 (116)
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH
Confidence 45677777777777788887778888888875 2 3344444444444433
No 319
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=56.93 E-value=1.7e+02 Score=27.23 Aligned_cols=66 Identities=14% Similarity=0.106 Sum_probs=35.5
Q ss_pred HHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhh---hcChhHHHHHHHHHHHHH
Q 011781 122 AFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKI---FGGRKVLQTGVLIWSLAT 193 (477)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr---~g~r~~~~~~~~~~~~~~ 193 (477)
++++.-+..+.....+..+.+..+......++..++..... +.+-.++ ||.+|.=+++.++.++..
T Consensus 33 ~f~~iE~i~g~~s~SlaLLADa~Hml~D~~al~lal~A~~~------a~r~~~~~~TfGy~R~eiLaa~~nav~L 101 (296)
T COG1230 33 AFMLIEIIGGLLTGSLALLADALHMLSDALALLLALIAIKL------ARRPATKRFTFGYKRLEILAAFLNALLL 101 (296)
T ss_pred HHHHHHHHHHHHhccHHHHHhHHHHHHHHHHHHHHHHHHHH------hcCCCCCCCCccHhHHHHHHHHHHHHHH
Confidence 33344445555555667778878876666666655444332 2222222 677776555555444433
No 320
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=54.79 E-value=51 Score=27.05 Aligned_cols=47 Identities=17% Similarity=0.198 Sum_probs=32.6
Q ss_pred HHHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHH
Q 011781 205 GLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVA 254 (477)
Q Consensus 205 ~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~i 254 (477)
.+++...++|+| .....+..++..+++++-|..+|+-.+-.+++-+.
T Consensus 99 ~~~~S~~~Fg~g---llGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 99 VLLVSLVFFGLG---LLGISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred HHHHHHHHHHHH---HHhhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 344444444444 34566777888888888999999988877776553
No 321
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=52.95 E-value=1.7e+02 Score=26.95 Aligned_cols=93 Identities=18% Similarity=0.162 Sum_probs=45.6
Q ss_pred HHHHhhcHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHH-HHHhhhhchhHHHhcCcccc
Q 011781 329 WKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVL-VTSIAAQFADNLIATGVETT 407 (477)
Q Consensus 329 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~-~~~~~g~l~dr~g~~~~~~~ 407 (477)
++++.|+|+.+..+...............|.|. +-...++++-+-+..+.+++ |+++ +-||+.+
T Consensus 62 ~~~~~~~p~~~~~~~l~a~li~~nW~lfiWAvn------~g~~leaSLGY~InPL~~VllG~lf---lkErls~------ 126 (293)
T COG2962 62 LKQLLKQPKTLLMLALTALLIGLNWWLFIWAVN------NGHVLEASLGYFINPLVNVLLGRLF---LKERLSR------ 126 (293)
T ss_pred HHHHHhCcHHHHHHHHHHHHHHHHHHHhheecC------CCchhHHHhHHHHHHHHHHHHHHHH---HHhhccH------
Confidence 356788888777766665555444444444432 22233444544555554443 4443 4456532
Q ss_pred eehhhhhHHhhhhhHHHHhhhcccCCCchHHHHH
Q 011781 408 MVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVG 441 (477)
Q Consensus 408 ~~r~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 441 (477)
.-.++..++.++.........+.+|..++
T Consensus 127 -----~Q~iAV~lA~~GV~~~~~~~g~lpwval~ 155 (293)
T COG2962 127 -----LQWIAVGLAAAGVLIQTWLLGSLPWVALA 155 (293)
T ss_pred -----HHHHHHHHHHHHHHHHHHHcCCCcHHHHH
Confidence 22334444444444443434455555443
No 322
>PF08566 Pam17: Mitochondrial import protein Pam17; InterPro: IPR013875 The presequence translocase-associated motor (PAM) drives the completion of preprotein translocation into the mitochondrial matrix. The Pam17 subunit is required for formation of a stable complex between cochaperones Pam16 and Pam18 and promotes the association of Pam16-Pam18 with the presequence translocase []. Mitochondria lacking Pam17 are selectively impaired in the import of matrix proteins [].
Probab=49.08 E-value=55 Score=27.36 Aligned_cols=15 Identities=7% Similarity=0.308 Sum_probs=8.5
Q ss_pred CCCCCCCCCCchhHH
Q 011781 100 ASYWPPWKNIPQRYK 114 (477)
Q Consensus 100 ~~~~~~~~~~~~~~~ 114 (477)
...|..+.+.+++++
T Consensus 24 ~L~W~~ffkLRk~rr 38 (173)
T PF08566_consen 24 QLTWNEFFKLRKSRR 38 (173)
T ss_pred CCCHHHHHHHHHHhh
Confidence 566776655544444
No 323
>PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [].; GO: 0046873 metal ion transmembrane transporter activity, 0030001 metal ion transport, 0055085 transmembrane transport, 0016020 membrane
Probab=46.11 E-value=2.5e+02 Score=26.12 Aligned_cols=28 Identities=18% Similarity=0.277 Sum_probs=13.7
Q ss_pred HHHHHHHHHhhccch-hhhHHHHhhhhcC
Q 011781 206 LVLSRVLVGIGEGVS-PSAATDLIARSIP 233 (477)
Q Consensus 206 ~~~~~~l~g~~~~~~-~~~~~~~i~~~~~ 233 (477)
-.+...+.+++.|.+ +.+..-++.+...
T Consensus 263 ~~~~~~~~a~aaG~~lyv~~~ell~~~~~ 291 (317)
T PF02535_consen 263 DIVSGILLAFAAGTFLYVAFVELLPEEFH 291 (317)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344455566554433 3444445555554
No 324
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=45.35 E-value=1.5e+02 Score=31.42 Aligned_cols=41 Identities=20% Similarity=0.137 Sum_probs=26.6
Q ss_pred cChhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhhc
Q 011781 177 GGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGE 217 (477)
Q Consensus 177 g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~ 217 (477)
||.+-+.++.++++++++...+..+..+.+....++.+++.
T Consensus 55 ~R~~~l~~t~~~f~i~sl~v~ll~~~p~lf~~~l~~~tf~~ 95 (704)
T TIGR01666 55 GRLKNVIFTLICFSIASFSVELLFGKPWLFAVGLTVSTFGF 95 (704)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHH
Confidence 55566667777777777776656666566666666655554
No 325
>PF06638 Strabismus: Strabismus protein; InterPro: IPR009539 This family consists of several strabismus (STB) or Van Gogh-like (VANGL) proteins 1 and 2. The exact function of this family is unknown. It is thought, however that STB1 gene and STB2 may be potent tumour suppressor gene candidates [].; GO: 0007275 multicellular organismal development, 0016021 integral to membrane
Probab=45.27 E-value=2.4e+02 Score=28.20 Aligned_cols=11 Identities=18% Similarity=-0.152 Sum_probs=7.9
Q ss_pred hHHHHHHHHHH
Q 011781 202 FMPGLVLSRVL 212 (477)
Q Consensus 202 ~~~~~~~~~~l 212 (477)
.+|.+++.|++
T Consensus 180 syWLFY~vrIl 190 (505)
T PF06638_consen 180 SYWLFYGVRIL 190 (505)
T ss_pred HHHHHhhheee
Confidence 45888877766
No 326
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=45.12 E-value=1.5e+02 Score=31.57 Aligned_cols=42 Identities=24% Similarity=0.081 Sum_probs=27.7
Q ss_pred cChhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhhcc
Q 011781 177 GGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEG 218 (477)
Q Consensus 177 g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~ 218 (477)
||.+-++++.++++++.+...+..+..+.+....++.+++.+
T Consensus 55 ~R~~~l~it~~~f~i~sl~v~ll~~~p~~~~~~l~~~tf~~~ 96 (701)
T TIGR01667 55 GRLKNLIITLSCFSIASFLVQLLFPKPWLFPFLLTLLTFGFI 96 (701)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 556667777788888877776566665666666655555543
No 327
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=44.00 E-value=53 Score=24.92 Aligned_cols=49 Identities=18% Similarity=0.225 Sum_probs=39.0
Q ss_pred cchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHH
Q 011781 148 SSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALL 196 (477)
Q Consensus 148 ~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 196 (477)
+...|=..+.+.-.+++.++++++..|+..+.+.=.++..+..++..++
T Consensus 53 p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI 101 (107)
T PF02694_consen 53 PAAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAII 101 (107)
T ss_pred cccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHhe
Confidence 3567888999999999999999999999988777777766655555443
No 328
>PTZ00370 STEVOR; Provisional
Probab=42.44 E-value=35 Score=30.95 Aligned_cols=25 Identities=8% Similarity=0.094 Sum_probs=12.0
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHhcc
Q 011781 267 GWESVFYIFGLLGIAWFSGFKILQE 291 (477)
Q Consensus 267 g~~~~~~~~~~~~~~~~~~~~~~~~ 291 (477)
.|-.+-++..+++++.+++..++.+
T Consensus 256 Pygiaalvllil~vvliilYiwlyr 280 (296)
T PTZ00370 256 PYGIAALVLLILAVVLIILYIWLYR 280 (296)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444455555555555544
No 329
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=40.87 E-value=51 Score=29.03 Aligned_cols=55 Identities=25% Similarity=0.344 Sum_probs=40.8
Q ss_pred HHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHh
Q 011781 207 VLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPI 262 (477)
Q Consensus 207 ~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l 262 (477)
.....-.|+|.+..+.+..+-+.+.+| +......++....+-+..+.|-.+.-++
T Consensus 175 ~ALAMasGvGSgSMMaAa~~aL~~~~P-~~a~~i~A~AaaSNllt~~~G~Y~~ifi 229 (241)
T PF11299_consen 175 YALAMASGVGSGSMMAAASGALAAAYP-EMADQILAFAAASNLLTSVTGLYMSIFI 229 (241)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHCc-chHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455567788888888888888888886 6777788877777777776665554443
No 330
>PF02554 CstA: Carbon starvation protein CstA; InterPro: IPR003706 Escherichia coli induces the synthesis of at least 30 proteins at the onset of carbon starvation, two-thirds of which are positively regulated by the cyclic AMP (cAMP) and cAMP receptor protein (CRP) complex. This family consists of carbon starvation protein CstA a predicted membrane protein. It has been suggested that CstA is involved in peptide utilization [].; GO: 0009267 cellular response to starvation, 0016020 membrane
Probab=40.74 E-value=3.4e+02 Score=26.12 Aligned_cols=35 Identities=20% Similarity=0.371 Sum_probs=21.9
Q ss_pred hhcCCcchhhHHHHH-HhhhhhHHHHHHhhhHHhhcccChh
Q 011781 230 RSIPLEERSRAVSFV-FGGLSFGSVAGLLLAPPIIENLGWE 269 (477)
Q Consensus 230 ~~~~~~~r~~~~~~~-~~~~~~g~~ig~~~~~~l~~~~g~~ 269 (477)
|+.| .+|-..++.. ....+.|.++||.++ ..+||-
T Consensus 48 DYvP-~~~~vlfghhf~sIAGaGPI~GPi~a----a~~Gwl 83 (376)
T PF02554_consen 48 DYVP-TNKWVLFGHHFASIAGAGPIVGPILA----AQFGWL 83 (376)
T ss_pred CCCC-CchHHhhHHHHHHHhccccchHHHHH----HHhcch
Confidence 3444 5566777774 444557777777776 356887
No 331
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=40.55 E-value=14 Score=29.53 Aligned_cols=17 Identities=18% Similarity=0.202 Sum_probs=8.1
Q ss_pred hHHHHHHHHHHHHHHHH
Q 011781 269 ESVFYIFGLLGIAWFSG 285 (477)
Q Consensus 269 ~~~~~~~~~~~~~~~~~ 285 (477)
||+++++.+++++++++
T Consensus 1 RW~l~~iii~~i~l~~~ 17 (130)
T PF12273_consen 1 RWVLFAIIIVAILLFLF 17 (130)
T ss_pred CeeeHHHHHHHHHHHHH
Confidence 45555554444443333
No 332
>PF01914 MarC: MarC family integral membrane protein; InterPro: IPR002771 Members of this family are integral membrane proteins that includes the antibiotic resistance protein MarC. These proteins may be transporters. ; GO: 0016021 integral to membrane
Probab=40.47 E-value=2.5e+02 Score=24.44 Aligned_cols=55 Identities=15% Similarity=0.062 Sum_probs=28.8
Q ss_pred hhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChh-HHHHHHHHHHHHHH
Q 011781 229 ARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWE-SVFYIFGLLGIAWF 283 (477)
Q Consensus 229 ~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~-~~~~~~~~~~~~~~ 283 (477)
.+-.++++|-+..-.......+-..+....|..+.+.+|.. ..|-+.|.+.+...
T Consensus 28 t~~~~~~~r~~ia~~a~~~a~~ill~f~~~G~~iL~~fgIsl~af~IaGGiiL~~i 83 (203)
T PF01914_consen 28 TKGMSPKERRRIARRASIIAFIILLIFAFFGQLILNFFGISLPAFRIAGGIILFLI 83 (203)
T ss_pred hCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 33444455544444444444444555566666777777754 35555555444433
No 333
>PRK02237 hypothetical protein; Provisional
Probab=40.18 E-value=78 Score=24.11 Aligned_cols=48 Identities=17% Similarity=0.124 Sum_probs=38.0
Q ss_pred chhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHH
Q 011781 149 SVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALL 196 (477)
Q Consensus 149 ~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 196 (477)
+..|=+.+.+.-.+++.++++++..|+..+-+.=.++..+..++..++
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI 103 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVI 103 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHh
Confidence 447889999999999999999999999888777666666655555443
No 334
>COG2836 Uncharacterized conserved protein [Function unknown]
Probab=39.41 E-value=2.7e+02 Score=24.59 Aligned_cols=35 Identities=17% Similarity=0.081 Sum_probs=28.8
Q ss_pred CCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhc
Q 011781 368 SLNLTEAAWVSILPPLASVLVTSIAAQFADNLIAT 402 (477)
Q Consensus 368 g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~ 402 (477)
.-|+.+-+.+...++++.....+..|..++++..-
T Consensus 160 tgS~~~Gal~mlaFGlGTlP~ll~~G~~s~~~s~~ 194 (232)
T COG2836 160 TGSAFEGALVMLAFGLGTLPNLLAMGIFSSKLSKS 194 (232)
T ss_pred cCCHHHHHHHHHHHhhcccHHHHHHHHHHHHHHHH
Confidence 45777788888999999999888889888887643
No 335
>PRK10263 DNA translocase FtsK; Provisional
Probab=39.37 E-value=1.6e+02 Score=33.40 Aligned_cols=22 Identities=23% Similarity=0.327 Sum_probs=14.4
Q ss_pred hhhHHHHHHhhhHHhhcccChh
Q 011781 248 LSFGSVAGLLLAPPIIENLGWE 269 (477)
Q Consensus 248 ~~~g~~ig~~~~~~l~~~~g~~ 269 (477)
.+.++.+|..++.++...+|+-
T Consensus 61 ~Nl~GiVGA~LAD~L~~LFGl~ 82 (1355)
T PRK10263 61 HNLGGMPGAWLADTLFFIFGVM 82 (1355)
T ss_pred ccccchHHHHHHHHHHHHHhHH
Confidence 4556667777777766666754
No 336
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=39.30 E-value=7.1e+02 Score=29.41 Aligned_cols=20 Identities=10% Similarity=0.174 Sum_probs=11.7
Q ss_pred cChhHHHHHHHHHHHHHHHH
Q 011781 266 LGWESVFYIFGLLGIAWFSG 285 (477)
Q Consensus 266 ~g~~~~~~~~~~~~~~~~~~ 285 (477)
.+|+.++++..++.++.++.
T Consensus 195 ~sw~Lalv~l~~~pl~~~~~ 214 (1466)
T PTZ00265 195 KNARLTLCITCVFPLIYICG 214 (1466)
T ss_pred HhHHHHHHHHHHHHHHHHHH
Confidence 46887777665554444333
No 337
>COG0701 Predicted permeases [General function prediction only]
Probab=36.97 E-value=3.6e+02 Score=25.36 Aligned_cols=47 Identities=19% Similarity=0.130 Sum_probs=23.2
Q ss_pred HHHhhhhhHHHHHh-hCCchhhhHHHHHHHHHHHHHHHHhhhhchhHH
Q 011781 353 YTCLSWLPTYFSEE-LSLNLTEAAWVSILPPLASVLVTSIAAQFADNL 399 (477)
Q Consensus 353 ~~~~~~~~~~~~~~-~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~ 399 (477)
..+..|.|...... .|.++...-.+....++..-++...-..+.+-+
T Consensus 210 ~~i~~~vp~~~l~~~~G~~~~~s~~~a~~ig~~Ly~~s~~~ipi~~sl 257 (317)
T COG0701 210 GAIQVYLPQDILLSYLGSNGIFSVLLAVLIGIPLYLCTEADIPIAASL 257 (317)
T ss_pred HHHHhccCHHHHHHHhcCCchHHHHHHHHHHHHHHhhhccchHHHHHH
Confidence 45667777766554 565554444444444444333333333333333
No 338
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=36.33 E-value=4.2e+02 Score=25.91 Aligned_cols=101 Identities=12% Similarity=0.083 Sum_probs=55.8
Q ss_pred HHhh-hhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHh
Q 011781 137 IIPM-SHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGI 215 (477)
Q Consensus 137 ~~~~-~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 215 (477)
.|.+ .+..|+++++...+.....+...++.++-.+-.-++|.|..+..+.....+...........+.......++.|+
T Consensus 15 ~p~i~~~a~gl~~~~~~~~i~at~l~sgi~tllq~~~~~~~G~~~P~~~g~s~a~~~~~~~~~~~~~~~~~~ga~~v~Gi 94 (406)
T TIGR03173 15 VPLIVGGALGLSAEQTAYLISADLFACGIATLIQTLGIGPFGIRLPVVQGVSFAAVGPMIAIGAGGGLGAIFGAVIVAGL 94 (406)
T ss_pred HHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhccccccCCccceeecCcHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Confidence 4443 344689988888888888888888888765333356777666655433223322221112233344444445554
Q ss_pred hccchhhhHHHHhhhhcCCcchh
Q 011781 216 GEGVSPSAATDLIARSIPLEERS 238 (477)
Q Consensus 216 ~~~~~~~~~~~~i~~~~~~~~r~ 238 (477)
..-... .....+.+.+|+.-.|
T Consensus 95 i~illg-~~~~~l~~~iPp~v~G 116 (406)
T TIGR03173 95 FVILLA-PFFSKLVRFFPPVVTG 116 (406)
T ss_pred HHHHHH-HHHHHHHHHCCcHHHH
Confidence 433222 3455677778765444
No 339
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=35.59 E-value=1.3e+02 Score=19.61 Aligned_cols=38 Identities=16% Similarity=0.066 Sum_probs=22.2
Q ss_pred HHHHHHHHHhhhhhhhhhhh-hcChhHHHHHHHHHHHHH
Q 011781 156 SSFFWGYALSQLPGGWLAKI-FGGRKVLQTGVLIWSLAT 193 (477)
Q Consensus 156 ~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~ 193 (477)
....+..++.....|+..|+ ++.++...+..++.++..
T Consensus 7 g~~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~llG~~~ 45 (55)
T PF09527_consen 7 GFTMAAPILVGFFLGYWLDKWFGTSPWFTLIGLLLGIAA 45 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHH
Confidence 34444555666677777775 677666655545544443
No 340
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=35.19 E-value=2.5e+02 Score=27.31 Aligned_cols=68 Identities=13% Similarity=0.149 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHhHHHHHHHhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhHHHhcC
Q 011781 336 KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATG 403 (477)
Q Consensus 336 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~ 403 (477)
+..+.+.+..++..+.--+...-...|+.+..|-+....+..-.+-+...++...+.|...|+..|.|
T Consensus 27 ~~~i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~K 94 (503)
T KOG2601|consen 27 STVIFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVK 94 (503)
T ss_pred ceeehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHH
Confidence 34444556666666676666667777776655544555555545555556666667788888887763
No 341
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=33.80 E-value=1.8e+02 Score=21.95 Aligned_cols=29 Identities=14% Similarity=0.067 Sum_probs=15.3
Q ss_pred Hhhhhhhhhhhh-hcChhHHHHHHHHHHHH
Q 011781 164 LSQLPGGWLAKI-FGGRKVLQTGVLIWSLA 192 (477)
Q Consensus 164 ~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~ 192 (477)
+...+.|...|+ ++-++.+.+.+++.+++
T Consensus 57 l~G~~lG~WLD~~~~t~~~~tl~~lllGv~ 86 (100)
T TIGR02230 57 LLGVAVGIWLDRHYPSPFSWTLTMLIVGVV 86 (100)
T ss_pred HHHHHHHHHHHhhcCCCcHHHHHHHHHHHH
Confidence 344455666664 66655555554444443
No 342
>TIGR03802 Asp_Ala_antiprt aspartate-alanine antiporter. All members of the seed alignment for this model are asparate-alanine anti-transporters (AspT) encoded next to the gene for aspartate 4-decarboxylase (AspD), which converts asparate to alanine, releasing CO2. The exchange of Asp for Ala is electrogenic, so the AspD/AspT system confers a proton-motive force. This transporter contains two copies of the AspT/YidE/YbjL antiporter duplication domain (TIGR01625).
Probab=33.51 E-value=3.3e+02 Score=28.09 Aligned_cols=84 Identities=12% Similarity=0.082 Sum_probs=43.2
Q ss_pred hhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhhccchhhhHHHHhh
Q 011781 150 VAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIA 229 (477)
Q Consensus 150 ~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~ 229 (477)
+.|+..-++.+|...|.-+..-+.+ .|.+..+ ++.++..+..++.......+.-+=....+-.++.+...++..+...
T Consensus 451 ~~GL~lFla~vG~~aG~~f~~~l~~-~G~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~aG~~t~t~~l~~a~ 528 (562)
T TIGR03802 451 DLGLALFIAVVGLSAGPQAVTAIKE-MGLTLFL-LGIVVTILPLIITMLIGKYVLKYDPALLLGALAGARTATPALGAVL 528 (562)
T ss_pred HHhHHHHHHHHHHhhhHHHHHHHHH-hhHHHHH-HHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhhccCCCcHHHHHHH
Confidence 4677777777777777766666643 5544443 3434333333332222211111112223333455666777777777
Q ss_pred hhcCCc
Q 011781 230 RSIPLE 235 (477)
Q Consensus 230 ~~~~~~ 235 (477)
+..+.+
T Consensus 529 ~~~~~~ 534 (562)
T TIGR03802 529 ERAGSS 534 (562)
T ss_pred HhcCCC
Confidence 776533
No 343
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=33.10 E-value=2.8e+02 Score=22.87 Aligned_cols=32 Identities=25% Similarity=0.312 Sum_probs=22.6
Q ss_pred cchhhHHHHHHHHHHHHhhhhhhhhhhhhcCh
Q 011781 148 SSVAGLVQSSFFWGYALSQLPGGWLAKIFGGR 179 (477)
Q Consensus 148 ~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r 179 (477)
+..+.++.+...++..+..+-.|.++-.+...
T Consensus 95 P~~~~~~~S~~~Fg~gllGisYGilSaSWD~~ 126 (153)
T PF11947_consen 95 PPWAVLLVSLVFFGLGLLGISYGILSASWDPE 126 (153)
T ss_pred CchHHHHHHHHHHHHHHHhhhhhhcccccCCC
Confidence 34556677777777777778888888776654
No 344
>PF06826 Asp-Al_Ex: Predicted Permease Membrane Region; InterPro: IPR006512 These sequences contain a domain that is duplicated in HI0035 of Haemophilus influenzae, in YidE and YbjL of Escherichia coli, and in a number of other putative transporters. Member proteins may have 0, 1, or 2 copies of the TrkA-C potassium uptake domain (IPR006037 from INTERPRO) between the duplications. The duplication appears distantly related to both the N- and the C-terminal domains the sodium/hydrogen exchanger family domain (IPR006153 from INTERPRO). The domain contains several apparent transmembrane regions and is proposed here to act in transport.
Probab=31.82 E-value=3.1e+02 Score=23.03 Aligned_cols=82 Identities=13% Similarity=0.031 Sum_probs=44.1
Q ss_pred hhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhhccchhhhHHHHhh
Q 011781 150 VAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIA 229 (477)
Q Consensus 150 ~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~ 229 (477)
+.|+..-++.++.-.+.-+..-+.+. |-+.. ..+.++..+..++.......+.-+=.....-.++.+...++..+...
T Consensus 57 ~~GL~lFl~~VGl~aG~~F~~~l~~~-G~~~~-~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~G~~aGa~T~tp~L~~A~ 134 (169)
T PF06826_consen 57 QLGLALFLAAVGLSAGPGFFSSLKRG-GLKLL-LLGVIITLVPLLIALVIGRYLFKLNPGIAAGILAGALTSTPALAAAQ 134 (169)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-hHHHH-HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHccccCcHHHHHHH
Confidence 46778888888888888777776655 54443 33444444444333222221111111222233444566677777778
Q ss_pred hhcC
Q 011781 230 RSIP 233 (477)
Q Consensus 230 ~~~~ 233 (477)
|...
T Consensus 135 ~~~~ 138 (169)
T PF06826_consen 135 EAIS 138 (169)
T ss_pred Hhhh
Confidence 8743
No 345
>COG1480 Predicted membrane-associated HD superfamily hydrolase [General function prediction only]
Probab=31.72 E-value=6.3e+02 Score=26.54 Aligned_cols=14 Identities=7% Similarity=0.116 Sum_probs=6.2
Q ss_pred ccChhHHHHHHHHH
Q 011781 265 NLGWESVFYIFGLL 278 (477)
Q Consensus 265 ~~g~~~~~~~~~~~ 278 (477)
..+|.+.......+
T Consensus 271 s~~~~~~~~~~~~v 284 (700)
T COG1480 271 SVNILPLLGLLILV 284 (700)
T ss_pred cccHHHHHHHHHHH
Confidence 34555444443333
No 346
>KOG2262 consensus Sexual differentiation process protein ISP4 [Signal transduction mechanisms]
Probab=30.53 E-value=1.3e+02 Score=31.18 Aligned_cols=12 Identities=33% Similarity=0.418 Sum_probs=6.0
Q ss_pred HHHHHHHhhccc
Q 011781 208 LSRVLVGIGEGV 219 (477)
Q Consensus 208 ~~~~l~g~~~~~ 219 (477)
+.-=+.|.|.++
T Consensus 188 lttQ~lGyGwAG 199 (761)
T KOG2262|consen 188 LTTQLLGYGWAG 199 (761)
T ss_pred HHHHHhcccHhh
Confidence 334455665554
No 347
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=30.31 E-value=5.9e+02 Score=25.73 Aligned_cols=82 Identities=16% Similarity=0.051 Sum_probs=57.9
Q ss_pred HHHHHHHHHhhccchhhhHHHHhhhhcCC-cchhhHHHHHHhhhhhH-HHHHHhhhHHhhcccChhHHHHHHHHHHHHHH
Q 011781 206 LVLSRVLVGIGEGVSPSAATDLIARSIPL-EERSRAVSFVFGGLSFG-SVAGLLLAPPIIENLGWESVFYIFGLLGIAWF 283 (477)
Q Consensus 206 ~~~~~~l~g~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~g-~~ig~~~~~~l~~~~g~~~~~~~~~~~~~~~~ 283 (477)
+.+.....|++........-+-+.+.+|. +++...+|.++...++- .++.-.+++-+....||-+.-.+.=++.++..
T Consensus 287 ial~vl~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~GW~~~AlitPiv~litg 366 (509)
T COG3202 287 IALLVLAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVGWFTGALITPLVMLITG 366 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 44455666777777777777778888863 44778888888877776 66677778888889999887777666655554
Q ss_pred HHHH
Q 011781 284 SGFK 287 (477)
Q Consensus 284 ~~~~ 287 (477)
++++
T Consensus 367 ~lFF 370 (509)
T COG3202 367 VLFF 370 (509)
T ss_pred HHHH
Confidence 4333
No 348
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=30.08 E-value=2.5e+02 Score=27.82 Aligned_cols=53 Identities=11% Similarity=-0.046 Sum_probs=36.6
Q ss_pred hhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHH
Q 011781 140 MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLA 192 (477)
Q Consensus 140 ~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 192 (477)
+...+|++.++...+.+.-.+...++.++.-....++|-|-....+.....++
T Consensus 40 vg~a~~l~~~~~~~Lis~~l~~~GiaTllq~~~~~~~g~~lP~~lG~sFafi~ 92 (451)
T COG2233 40 VGLALGLSAEDTAYLISADLLASGIGTLLQLLGTGPGGSGLPSYLGSSFAFVA 92 (451)
T ss_pred hccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCcccCCCeeEechHHHHH
Confidence 45678999999999999999999998888766444455454444433333333
No 349
>PF03596 Cad: Cadmium resistance transporter; InterPro: IPR004676 These proteins are members of the Cadmium Resistance (CadD) Family. To date, this family of proteins has only been found in Gram-positive bacteria. The CadD family includes two close orthologues in two Staphylococcus species that have been reported to function in cadmium resistance, and another staphylococcal protein that has been reported to possibly function in quaternary ammonium ion export.
Probab=29.79 E-value=3.6e+02 Score=23.19 Aligned_cols=30 Identities=20% Similarity=0.030 Sum_probs=15.1
Q ss_pred HhhhHHhhcccChhHHHHHHHHHHHHHHHH
Q 011781 256 LLLAPPIIENLGWESVFYIFGLLGIAWFSG 285 (477)
Q Consensus 256 ~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~ 285 (477)
+++++.......-.|..-+.|++-+...+-
T Consensus 43 Sl~~~~~l~~ip~~wiLGlLGliPI~lGi~ 72 (191)
T PF03596_consen 43 SLLGAFGLLFIPPEWILGLLGLIPIYLGIK 72 (191)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 444444444444555555555555554443
No 350
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=28.67 E-value=7.5e+02 Score=26.46 Aligned_cols=26 Identities=4% Similarity=0.156 Sum_probs=13.6
Q ss_pred cccChhHHHHHHHHHHHHHHHHHHHh
Q 011781 264 ENLGWESVFYIFGLLGIAWFSGFKIL 289 (477)
Q Consensus 264 ~~~g~~~~~~~~~~~~~~~~~~~~~~ 289 (477)
-.++|..+++..+.+.+..++.+.+.
T Consensus 289 ~~ys~~L~li~l~~~~l~~l~~~~~~ 314 (709)
T COG2274 289 FLYSWKLTLIVLAAIPLNVLITLIFQ 314 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567766666555554444444333
No 351
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=28.62 E-value=2e+02 Score=24.55 Aligned_cols=23 Identities=17% Similarity=0.381 Sum_probs=19.7
Q ss_pred HHHHHHHHHhhhhhhhhhhhhcC
Q 011781 156 SSFFWGYALSQLPGGWLAKIFGG 178 (477)
Q Consensus 156 ~~~~~~~~~~~~~~g~l~dr~g~ 178 (477)
.-|.+++.+...+.|++.||..+
T Consensus 89 gGyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 89 GGYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhc
Confidence 46778888999999999999875
No 352
>PF13440 Polysacc_synt_3: Polysaccharide biosynthesis protein
Probab=27.67 E-value=4.2e+02 Score=23.19 Aligned_cols=33 Identities=21% Similarity=0.138 Sum_probs=19.8
Q ss_pred HhhhhhHHHHHhhCCchhhhHHHHHHHHHHHHHH
Q 011781 355 CLSWLPTYFSEELSLNLTEAAWVSILPPLASVLV 388 (477)
Q Consensus 355 ~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~ 388 (477)
.....+.++.+.+ +++.+.|.......+...+.
T Consensus 201 ~~~~~~~~li~~~-l~~~~~g~y~~a~~l~~~~~ 233 (251)
T PF13440_consen 201 LLSQIDRLLIGYF-LGPEAVGIYSVAQRLASLPA 233 (251)
T ss_pred HHHHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHH
Confidence 3455666666542 37777877766665555443
No 353
>COG0730 Predicted permeases [General function prediction only]
Probab=27.20 E-value=4.6e+02 Score=23.56 Aligned_cols=23 Identities=26% Similarity=0.338 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHhhhhchhHHHhc
Q 011781 380 LPPLASVLVTSIAAQFADNLIAT 402 (477)
Q Consensus 380 ~~~~~~~~~~~~~g~l~dr~g~~ 402 (477)
...++.++|..++.++..|..++
T Consensus 211 ~l~~g~~~G~~lG~~l~~~~~~~ 233 (258)
T COG0730 211 LLAVGSILGAYLGARLARRLSPK 233 (258)
T ss_pred HHHHHHHHHHHHHHHHHHhcCHH
Confidence 55666667777777777776544
No 354
>PRK04972 putative transporter; Provisional
Probab=26.83 E-value=5e+02 Score=26.78 Aligned_cols=92 Identities=12% Similarity=0.105 Sum_probs=41.2
Q ss_pred hhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhhccchhhhHHHHhh
Q 011781 150 VAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIA 229 (477)
Q Consensus 150 ~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~ 229 (477)
+.|+..-+..+|...|.-+..-+.+ .|-+..+ .+.++..+..++..++.....-+=..+.+-.++.+...++..+.+.
T Consensus 446 ~~GL~lFla~vGl~aG~~f~~~~~~-~g~~~~~-~g~~~t~~~~~~~~~~~~~~~k~~~~~~~G~~aG~~t~~~~l~~~~ 523 (558)
T PRK04972 446 EFGLMVFMAGVGLSAGSGINNGLGA-VGGQMLI-AGLIVSLVPVVICFLFGAYVLRMNRALLFGAIMGARTCAPAMEIIS 523 (558)
T ss_pred HHhHHHHHHHHHHhhhHHHHHHHHH-hhHHHHH-HHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHhCCCCCcHHHHHHH
Confidence 3455555555555555545444432 3433332 3333333332222222222111112233344555666777777777
Q ss_pred hhcCCcchhhHHHH
Q 011781 230 RSIPLEERSRAVSF 243 (477)
Q Consensus 230 ~~~~~~~r~~~~~~ 243 (477)
+..+.+.-...++.
T Consensus 524 ~~~~~~~~~~gYa~ 537 (558)
T PRK04972 524 DTARSNIPALGYAG 537 (558)
T ss_pred hhcCCCCcccccHh
Confidence 77754443333443
No 355
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=26.70 E-value=2.3e+02 Score=28.89 Aligned_cols=32 Identities=6% Similarity=0.028 Sum_probs=18.4
Q ss_pred CcchhhHHHHHHhhhhhHHHHHHhhhHHhhcc
Q 011781 234 LEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN 265 (477)
Q Consensus 234 ~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~ 265 (477)
+++||..+...-....+.+.+++.+++.+...
T Consensus 292 ~~~rg~l~t~~i~~y~~~~~iaGy~S~~~yk~ 323 (521)
T PF02990_consen 292 PNNRGSLLTAAIILYALTSFIAGYVSARLYKS 323 (521)
T ss_pred ccCcchHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 35566666555555666666666666655543
No 356
>PF04226 Transgly_assoc: Transglycosylase associated protein; InterPro: IPR007341 This bacterial protein is predicted to be an integral membrane protein. Some family members have been annotated as transglycosylase-associated proteins, but no experimental evidence is provided. This family was annotated based on the information in P76011 from SWISSPROT.; GO: 0016021 integral to membrane
Probab=26.64 E-value=1.8e+02 Score=18.50 Aligned_cols=30 Identities=17% Similarity=0.215 Sum_probs=13.3
Q ss_pred HHHhhhHHhhcccC----hhHHHHHHHHHHHHHH
Q 011781 254 AGLLLAPPIIENLG----WESVFYIFGLLGIAWF 283 (477)
Q Consensus 254 ig~~~~~~l~~~~g----~~~~~~~~~~~~~~~~ 283 (477)
+|.++++++.+.++ +.+.-++.+++..+.+
T Consensus 6 iGa~vGg~l~~~lg~~~~~~~~~~i~aviGAiil 39 (48)
T PF04226_consen 6 IGAFVGGWLFGLLGINGGGSWGSFIVAVIGAIIL 39 (48)
T ss_pred HHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHH
Confidence 34444444443333 3444445555444433
No 357
>PRK03818 putative transporter; Validated
Probab=25.76 E-value=5.3e+02 Score=26.58 Aligned_cols=81 Identities=14% Similarity=0.017 Sum_probs=38.9
Q ss_pred hhhHHHHHHHHHHHHhhhhhhhhhhhhcChhHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhhccchhhhHHHHhh
Q 011781 150 VAGLVQSSFFWGYALSQLPGGWLAKIFGGRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIA 229 (477)
Q Consensus 150 ~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~ 229 (477)
+.|+..-++.+|.-.|.-+..-+.+..|.+..+ ++.++..+..++...+...+.-+=..+.+-.++.+...++..+.+.
T Consensus 436 ~~GL~lFla~vGl~aG~~f~~~~~~~~G~~~~~-~g~~v~~~~~~~~~~~~~~~~~~~~~~~~G~~aG~~t~tp~l~~a~ 514 (552)
T PRK03818 436 ELGIVLFLAVVGLKSGGDFVDTLVNGEGLSWIG-YGFLITAVPLLIVGILARMLAKMNYLTLCGMLAGSMTDPPALAFAN 514 (552)
T ss_pred HHhHHHHHHHHHhhhhHHHHHHHhccchHHHHH-HHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHhccCCCcHHHHHHh
Confidence 355666666666666665555544444544443 3333333333322222222111212333344555666677777777
Q ss_pred hh
Q 011781 230 RS 231 (477)
Q Consensus 230 ~~ 231 (477)
+.
T Consensus 515 ~~ 516 (552)
T PRK03818 515 NL 516 (552)
T ss_pred cc
Confidence 74
No 358
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=25.72 E-value=5.4e+02 Score=23.79 Aligned_cols=58 Identities=14% Similarity=0.118 Sum_probs=31.9
Q ss_pred HHHHHHHHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcc
Q 011781 206 LVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN 265 (477)
Q Consensus 206 ~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~ 265 (477)
.-..|.+.|+-. ..+...++++.-++|+++.--..--.....+++.++.|++| ++.+.
T Consensus 22 ~~~lr~~~g~~~-vlf~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g-~~l~~ 79 (287)
T PF07760_consen 22 IPPLRVILGFPF-VLFLPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIG-LLLNY 79 (287)
T ss_pred hhHHHHHHHHHH-HHHhccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHH-HHHHh
Confidence 456777777765 34466788888888854433222223333334444455544 44443
No 359
>PRK15049 L-asparagine permease; Provisional
Probab=25.52 E-value=7.1e+02 Score=25.16 Aligned_cols=22 Identities=14% Similarity=0.120 Sum_probs=11.0
Q ss_pred ChhHHHHHHHHHHHHHHHHHHH
Q 011781 267 GWESVFYIFGLLGIAWFSGFKI 288 (477)
Q Consensus 267 g~~~~~~~~~~~~~~~~~~~~~ 288 (477)
..++..+...+..++..+.++.
T Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~ 467 (499)
T PRK15049 446 NGTYTIAALPIIGILLVIGWFG 467 (499)
T ss_pred chHHHHHHHHHHHHHHHHHHHH
Confidence 3566666555544444444433
No 360
>KOG1397 consensus Ca2+/H+ antiporter VCX1 and related proteins [Inorganic ion transport and metabolism]
Probab=25.41 E-value=2.3e+02 Score=27.35 Aligned_cols=41 Identities=17% Similarity=0.147 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHhHHhhhhhhCCCcchhhHH
Q 011781 114 KLIGTTSLAFVICNMDKVNLSVAIIPMSHRFGWNSSVAGLV 154 (477)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~ 154 (477)
.-...+....+...+......-.+....+++++|.+-+|++
T Consensus 290 ss~~~L~~~T~~vsllaeyLV~~Id~~~ds~~ls~~Figli 330 (441)
T KOG1397|consen 290 SSIIWLLIMTLLVSLLAEYLVDTIDDVSDSWGLSVKFIGLI 330 (441)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhheee
Confidence 43444444444444444444445666778888888777665
No 361
>KOG1277 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=25.41 E-value=2.1e+02 Score=28.14 Aligned_cols=24 Identities=25% Similarity=0.349 Sum_probs=15.4
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhh
Q 011781 151 AGLVQSSFFWGYALSQLPGGWLAK 174 (477)
Q Consensus 151 ~g~~~~~~~~~~~~~~~~~g~l~d 174 (477)
-|-+.+...+.+++.+++.|+.+.
T Consensus 325 rGal~saaI~vYAlTs~i~GY~~g 348 (593)
T KOG1277|consen 325 RGALLSAAIVVYALTSPINGYVSG 348 (593)
T ss_pred chHHHHHHHHHHHhcccccccccc
Confidence 456666666677777776666544
No 362
>PRK02935 hypothetical protein; Provisional
Probab=25.21 E-value=2.6e+02 Score=21.22 Aligned_cols=18 Identities=0% Similarity=0.086 Sum_probs=9.0
Q ss_pred hhhhcChhHHHHHHHHHH
Q 011781 173 AKIFGGRKVLQTGVLIWS 190 (477)
Q Consensus 173 ~dr~g~r~~~~~~~~~~~ 190 (477)
+.|+++-|.+...+.+.+
T Consensus 6 ssKINkiRt~aL~lvfiG 23 (110)
T PRK02935 6 SNKINKIRTFALSLVFIG 23 (110)
T ss_pred hhHHHHHHHHHHHHHHHH
Confidence 445555555554444433
No 363
>PF04341 DUF485: Protein of unknown function, DUF485; InterPro: IPR007436 This family includes several putative integral membrane proteins.
Probab=25.16 E-value=2.8e+02 Score=20.43 Aligned_cols=52 Identities=12% Similarity=0.202 Sum_probs=31.4
Q ss_pred HHHHhhc--HHHHHHHHHHHHhHHHHHHHhhhhhHHHHHhhCCchhhhHHHHHH
Q 011781 329 WKAIFRS--KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSIL 380 (477)
Q Consensus 329 ~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~ 380 (477)
++++.+. +..+.+.+..+..++++.....+.|..+.....-+....|++.++
T Consensus 7 f~~L~r~r~r~~~~l~~i~l~~y~~~~ll~a~~p~~m~~~v~~G~~t~g~~~g~ 60 (91)
T PF04341_consen 7 FQELVRRRRRLAWPLSAIFLVLYFGFVLLSAFAPELMATPVFPGSLTLGIVLGL 60 (91)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHcCcccCCCcCHHHHHHH
Confidence 3455443 445666677777778888888888888865433223444544433
No 364
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=24.84 E-value=3.1e+02 Score=20.73 Aligned_cols=28 Identities=14% Similarity=0.350 Sum_probs=12.3
Q ss_pred HHHHHHhhhHHhhcccC----hhHHHHHHHHH
Q 011781 251 GSVAGLLLAPPIIENLG----WESVFYIFGLL 278 (477)
Q Consensus 251 g~~ig~~~~~~l~~~~g----~~~~~~~~~~~ 278 (477)
..++|.++|-++=..++ |..+|++.|++
T Consensus 55 pil~G~~lG~WLD~~~~t~~~~tl~~lllGv~ 86 (100)
T TIGR02230 55 PTLLGVAVGIWLDRHYPSPFSWTLTMLIVGVV 86 (100)
T ss_pred HHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHH
Confidence 33444444444444454 34444444433
No 365
>PF11368 DUF3169: Protein of unknown function (DUF3169); InterPro: IPR021509 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently there is no known function.
Probab=24.41 E-value=5.2e+02 Score=23.21 Aligned_cols=24 Identities=17% Similarity=0.253 Sum_probs=12.8
Q ss_pred hHHHHHHhhhhhHHHHHHhhhHHh
Q 011781 239 RAVSFVFGGLSFGSVAGLLLAPPI 262 (477)
Q Consensus 239 ~~~~~~~~~~~~g~~ig~~~~~~l 262 (477)
+.....-.+..+|+++|...+..-
T Consensus 10 ~~~~~illg~~iGg~~G~~~~~~~ 33 (248)
T PF11368_consen 10 RFLLLILLGGLIGGFIGFFIGRIG 33 (248)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444555555556666665554443
No 366
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=23.94 E-value=4.7e+02 Score=22.56 Aligned_cols=31 Identities=32% Similarity=0.420 Sum_probs=23.2
Q ss_pred CcchhhHHHHHHhhhhhHHHHHHhhhHHhhc
Q 011781 234 LEERSRAVSFVFGGLSFGSVAGLLLAPPIIE 264 (477)
Q Consensus 234 ~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~ 264 (477)
.++.+++.++...+..+|.++|..+..++..
T Consensus 136 ~~~~~rA~~~~~~~L~~G~~lGs~l~~~l~~ 166 (194)
T PF11833_consen 136 ERKLGRAFLWTLGGLVVGLILGSLLASWLPV 166 (194)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 3556788887777778888888888777654
No 367
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=23.76 E-value=2.3e+02 Score=18.81 Aligned_cols=42 Identities=14% Similarity=0.196 Sum_probs=21.4
Q ss_pred hHHHHHHhhhHHhhcccChhHHHHHHHHHHHHHHHHHHHhcc
Q 011781 250 FGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQE 291 (477)
Q Consensus 250 ~g~~ig~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 291 (477)
+|.++|-..+......+++....++..+++++...+...+++
T Consensus 13 l~~vvgyI~ssL~~~~~n~~~~~Ii~vi~~i~~~~~~~~i~~ 54 (57)
T PF11151_consen 13 LGEVVGYIGSSLTGVTYNFTTAAIIAVIFGIIVANIIAVIPK 54 (57)
T ss_pred HHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHHHcCC
Confidence 344444333333333456666666666666665555544443
No 368
>cd02434 Nodulin-21_like_3 Nodulin-21 and CCC1-related protein family. Nodulin-21_like_3: This is a family of proteins closely related to nodulin-21, a plant nodule-specific protein that may be involved in symbiotic nitrogen fixation. This family is also related to CCC1, a yeast vacuole transmembrane protein that functions as an iron and manganese transporter.
Probab=23.53 E-value=4.5e+02 Score=23.27 Aligned_cols=18 Identities=11% Similarity=0.170 Sum_probs=10.7
Q ss_pred HHHHHHhhhhchhHHHhc
Q 011781 385 SVLVTSIAAQFADNLIAT 402 (477)
Q Consensus 385 ~~~~~~~~g~l~dr~g~~ 402 (477)
..+.-.+.|++..|++.+
T Consensus 180 ~~~~L~~~G~~~~~~~~~ 197 (225)
T cd02434 180 VAFTLFLLGSFKSKLYNG 197 (225)
T ss_pred HHHHHHHHHHHHHHhcCC
Confidence 445555566666666655
No 369
>PF11023 DUF2614: Protein of unknown function (DUF2614); InterPro: IPR020912 This entry describes proteins of unknown function, which are thought to be membrane proteins.; GO: 0005887 integral to plasma membrane
Probab=23.46 E-value=2e+02 Score=22.13 Aligned_cols=14 Identities=0% Similarity=0.100 Sum_probs=6.1
Q ss_pred hhhcChhHHHHHHH
Q 011781 174 KIFGGRKVLQTGVL 187 (477)
Q Consensus 174 dr~g~r~~~~~~~~ 187 (477)
.|+++-|.+.+.++
T Consensus 6 ~KiN~~R~~al~li 19 (114)
T PF11023_consen 6 SKINKIRTFALSLI 19 (114)
T ss_pred hHHHHHHHHHHHHH
Confidence 34444444444333
No 370
>COG2095 MarC Multiple antibiotic transporter [Intracellular trafficking and secretion]
Probab=23.28 E-value=5e+02 Score=22.60 Aligned_cols=61 Identities=20% Similarity=0.077 Sum_probs=35.2
Q ss_pred HHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhH-HHHHHHHHHHHHHHH
Q 011781 225 TDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWES-VFYIFGLLGIAWFSG 285 (477)
Q Consensus 225 ~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~-~~~~~~~~~~~~~~~ 285 (477)
...+.+-+++++|.+..=.......+...+....|..+.+.+|... .|-+.|.+.+....+
T Consensus 27 f~slt~~~~~~~r~~v~~ra~i~a~~ill~f~~~G~~il~~fgIsi~a~rIAGGilLf~ia~ 88 (203)
T COG2095 27 FISLTKGLSPEERNRVALRASIIALLILLVFLLLGEGILRFFGISIDAFRIAGGILLFLIAL 88 (203)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHhhhHHHHHHHH
Confidence 3444555666777766655555555555666666777777676543 455555544443333
No 371
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=22.98 E-value=4.4e+02 Score=23.90 Aligned_cols=12 Identities=25% Similarity=0.102 Sum_probs=5.6
Q ss_pred CCCcchhhHHHH
Q 011781 145 GWNSSVAGLVQS 156 (477)
Q Consensus 145 g~s~~~~g~~~~ 156 (477)
+.|.....++++
T Consensus 214 ~as~~~ldYvFs 225 (254)
T PF07857_consen 214 GASQNGLDYVFS 225 (254)
T ss_pred CCCCcchheeHH
Confidence 344444444444
No 372
>TIGR03644 marine_trans_1 probable ammonium transporter, marine subtype. Members of this protein family are well conserved subclass of putative ammonimum transporters, belonging to the much broader set of ammonium/methylammonium transporter described by TIGR00836. Species with this transporter tend to be marine bacteria. Partial phylogenetic profiling (PPP) picks a member of this protein family as the single best-scoring protein vs. a reference profile for the marine environment Genome Property for a large number of different query genomes. This finding by PPP suggests that this transporter family represents an important adaptation to the marine environment.
Probab=22.97 E-value=7.3e+02 Score=24.37 Aligned_cols=47 Identities=17% Similarity=0.175 Sum_probs=25.7
Q ss_pred HHHhhccchhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhh
Q 011781 212 LVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLA 259 (477)
Q Consensus 212 l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~ 259 (477)
+.|+..+........++ +..+-++---+.++...+...|.+..+++.
T Consensus 298 iiG~iag~v~~~~~~~~-~~~~iDD~~~~~~vHg~~Gi~G~i~~glf~ 344 (404)
T TIGR03644 298 LIGAVGGVIVVFSIVLL-DKLKIDDPVGAISVHGVAGIWGTLVVPITN 344 (404)
T ss_pred HHHHHHHHHHHHHHHHH-HhCCCCCCcCchHhhhHHHHHHHHHHHHhc
Confidence 34443343333333333 344445555677777777777776666654
No 373
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=22.86 E-value=3e+02 Score=22.54 Aligned_cols=24 Identities=25% Similarity=0.475 Sum_probs=20.1
Q ss_pred HHHHHHHHhhhhhhhhhhhhcChh
Q 011781 157 SFFWGYALSQLPGGWLAKIFGGRK 180 (477)
Q Consensus 157 ~~~~~~~~~~~~~g~l~dr~g~r~ 180 (477)
-|.+++.+...+.|++.+|..+++
T Consensus 61 Gyl~gf~~~a~i~g~~~~~~~~~~ 84 (148)
T PF02632_consen 61 GYLLGFPLAALIIGLLAERLKRSR 84 (148)
T ss_pred hHHHHHHHHHHHHHHHHHhccccc
Confidence 577888889999999999988763
No 374
>COG1280 RhtB Putative threonine efflux protein [Amino acid transport and metabolism]
Probab=22.78 E-value=5.1e+02 Score=22.51 Aligned_cols=12 Identities=8% Similarity=0.052 Sum_probs=6.4
Q ss_pred hhcHHHHHHHHH
Q 011781 333 FRSKAVWAMIYA 344 (477)
Q Consensus 333 ~~~~~~~~~~l~ 344 (477)
+.||+.+.+++.
T Consensus 122 l~NPK~~lf~la 133 (208)
T COG1280 122 LLNPKAILFFLA 133 (208)
T ss_pred hhCcHHHHHHHH
Confidence 346666655443
No 375
>PF03741 TerC: Integral membrane protein TerC family; InterPro: IPR005496 A family containining a number of integral membrane proteins is named after TerC protein. TerC has been implicated in resistance to tellurium, and may be involved in efflux of tellurium ions. The tellurite-resistant Escherichia coli strain KL53 was found during testing of a group of clinical isolates for antibiotic and heavy metal ion resistance []. The determinant of the strain's tellurite resistance was located on a large conjugative plasmid, and analyses showed the genes terB, terC, terD and terE were essential for conservation of this resistance. Members of this family contain a number of conserved aspartates which may be involved in metal ion binding.; GO: 0016021 integral to membrane
Probab=22.62 E-value=4.9e+02 Score=22.20 Aligned_cols=58 Identities=21% Similarity=0.294 Sum_probs=33.2
Q ss_pred chhhhHHHHhhhhcCCcchhhHHHHHHhhhhhHHHHHHhhhHHhhcccChhHHHHHHHHH
Q 011781 219 VSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLL 278 (477)
Q Consensus 219 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~~~~~l~~~~g~~~~~~~~~~~ 278 (477)
.-.....+.+.+..|+++|.++.-+-..+..+--++.-.++.++.+. |.|..++.|+.
T Consensus 12 ~DN~~vi~~~~~~lp~~~r~kal~~Gi~~A~~lR~~~i~~~~~ll~~--~~~i~~igG~~ 69 (183)
T PF03741_consen 12 IDNAFVIAMIFRKLPPEQRRKALFWGIIGAIVLRIIFIFLASWLLSI--FPWILLIGGLF 69 (183)
T ss_pred hhHHHHHHHHHhCCCHHHhhhhHHHhHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHH
Confidence 33445566677778887776665544444445555555666666655 34444444433
No 376
>COG3619 Predicted membrane protein [Function unknown]
Probab=21.95 E-value=5.7e+02 Score=22.73 Aligned_cols=31 Identities=3% Similarity=0.022 Sum_probs=19.1
Q ss_pred cchhhHHHHHHHHHHHHhhhhhhhhhhhhcC
Q 011781 148 SSVAGLVQSSFFWGYALSQLPGGWLAKIFGG 178 (477)
Q Consensus 148 ~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~ 178 (477)
+........+..+..++|......+..|..+
T Consensus 54 ~~~~a~~~~~pii~Fv~Gv~~~~~~~r~~~~ 84 (226)
T COG3619 54 DAALAVLLLLPILAFVLGVAAAELISRRATR 84 (226)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 4445566667777777776655555555554
No 377
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=21.88 E-value=1.4e+02 Score=27.20 Aligned_cols=118 Identities=12% Similarity=0.110 Sum_probs=60.5
Q ss_pred HHHHHHHHHhhhhHHHHhHHh-hhhhhCCCcchhhHHHHHHHHHHHHhhhhhhhh-hhhhcChhHHHHHHHHHHHHHHHH
Q 011781 119 TSLAFVICNMDKVNLSVAIIP-MSHRFGWNSSVAGLVQSSFFWGYALSQLPGGWL-AKIFGGRKVLQTGVLIWSLATALL 196 (477)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l-~dr~g~r~~~~~~~~~~~~~~~~~ 196 (477)
+.+.+.+.-+..++-..+++. +.++++.......++-.+..+.....+.+-.-. -++...|..+..|.+++..+...+
T Consensus 206 iAllYmLsRL~iNiSQaYlaFfviddlqm~qsakAllP~v~Yl~SF~VS~v~~eipwngkrlKayYsaGgiiwifcga~i 285 (412)
T KOG4830|consen 206 IALLYMLSRLYINISQAYLAFFVIDDLQMEQSAKALLPMVAYLSSFSVSMVNSEIPWNGKRLKAYYSAGGIIWIFCGAVI 285 (412)
T ss_pred HHHHHHHHHHHhhhhhhheeeEEeehhhHHHHHhhhhHHHHHHhhhhHHhhcccCCcCcceeeeeeecccHHHHHhhhhe
Confidence 334444444555555555555 456666666666665555444444333222111 112222333444444444433333
Q ss_pred HHhhchHH-HHHHHHHHHHhhccchhhhHHHHhhhhcCCcc
Q 011781 197 PLLAGFMP-GLVLSRVLVGIGEGVSPSAATDLIARSIPLEE 236 (477)
Q Consensus 197 ~~~~~~~~-~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~ 236 (477)
......+. ..++..++.|++.+.......++.++...++.
T Consensus 286 lLlpr~i~symyAisvfIGIAnAimlvtslsitavli~~~~ 326 (412)
T KOG4830|consen 286 LLLPRGIKSYMYAISVFIGIANAIMLVTSLSITAVLINKNT 326 (412)
T ss_pred eecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 23444432 34566678899988888777777777775443
No 378
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=21.84 E-value=7.3e+02 Score=23.97 Aligned_cols=39 Identities=18% Similarity=0.112 Sum_probs=25.3
Q ss_pred hhhhHHHHHhhCCchhhhHHHHHHHHHHHHHHHHhhhhchhH
Q 011781 357 SWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADN 398 (477)
Q Consensus 357 ~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr 398 (477)
..+..|+ .|-+..+.+.+.+.+-..+.+|+.+.-++.|.
T Consensus 31 ~tLatyL---lG~~Ilq~S~Iia~yl~amGlGs~~sry~~dd 69 (508)
T COG4262 31 GTLATYL---LGGGILQTSLIIAGYLAAMGLGSLLSRYVLDD 69 (508)
T ss_pred HHHHHHh---cCCceeehHHHHHHHHHHhchhhhhhccccCc
Confidence 3344444 46666777777777777777777777666554
No 379
>KOG1277 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=21.71 E-value=72 Score=31.20 Aligned_cols=23 Identities=17% Similarity=0.130 Sum_probs=12.4
Q ss_pred HHHHHHHHHhhhhchhHHHhcCc
Q 011781 382 PLASVLVTSIAAQFADNLIATGV 404 (477)
Q Consensus 382 ~~~~~~~~~~~g~l~dr~g~~~~ 404 (477)
.+.+.+....+|-+-.|.|.|+|
T Consensus 337 AlTs~i~GY~~gs~Y~r~gG~~W 359 (593)
T KOG1277|consen 337 ALTSPINGYVSGSFYARLGGRRW 359 (593)
T ss_pred HhcccccccccceeeehhccHHH
Confidence 33344444445555567777755
No 380
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=21.52 E-value=6.3e+02 Score=23.13 Aligned_cols=20 Identities=10% Similarity=0.122 Sum_probs=14.4
Q ss_pred HHHHHHHHHHHHHhhhhchh
Q 011781 378 SILPPLASVLVTSIAAQFAD 397 (477)
Q Consensus 378 ~~~~~~~~~~~~~~~g~l~d 397 (477)
+....++.+++.++...+.+
T Consensus 168 ~lPqaiGm~i~a~i~~~~~~ 187 (269)
T PF06800_consen 168 FLPQAIGMLIGAFIFNLFSK 187 (269)
T ss_pred HHHHHHHHHHHHHHHhhccc
Confidence 34777888888888777653
No 381
>PRK11588 hypothetical protein; Provisional
Probab=20.38 E-value=9.1e+02 Score=24.53 Aligned_cols=15 Identities=20% Similarity=0.202 Sum_probs=9.2
Q ss_pred ccChhHHHHHHHHHH
Q 011781 265 NLGWESVFYIFGLLG 279 (477)
Q Consensus 265 ~~g~~~~~~~~~~~~ 279 (477)
..++|...++.....
T Consensus 228 G~~~R~i~~~v~~~i 242 (506)
T PRK11588 228 GSGLRIVMWVIFTLI 242 (506)
T ss_pred cHHHHHHHHHHHHHH
Confidence 456887776655443
No 382
>COG3559 TnrB3 Putative exporter of polyketide antibiotics [Cell envelope biogenesis, outer membrane]
Probab=20.15 E-value=8.5e+02 Score=24.09 Aligned_cols=59 Identities=14% Similarity=0.138 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHhHHHHHHHhhhhhHHHHHh----------hCCchhhhHHHHHHHHHHHHHHHHhhhh
Q 011781 336 KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEE----------LSLNLTEAAWVSILPPLASVLVTSIAAQ 394 (477)
Q Consensus 336 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~----------~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 394 (477)
..++...+..++....+..++.-+-.++.+. .+....+-+++...+.+.+++...+.-.
T Consensus 298 g~lI~W~v~~fllglvygs~fg~l~~fL~~n~avrqave~~e~ag~le~~Flv~lfsIisil~a~~~V~ 366 (536)
T COG3559 298 GSLILWTVGLFLLGLVYGSVFGGLGDFLGDNTAVRQAVERMEGAGALEQAFLVLLFSIISILAAAFAVS 366 (536)
T ss_pred CccHHHHHHHHHHHHHHHHHhhhhhhhhcCcHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444445555666666655555554444321 2333344456666666666666554433
Done!