Query 011782
Match_columns 477
No_of_seqs 313 out of 2089
Neff 6.9
Searched_HMMs 13730
Date Mon Mar 25 15:13:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011782.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/011782hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ymga1 f.19.1.1 (A:6-239) Aqu 16.2 87 0.0064 26.7 5.5 36 392-427 68-103 (234)
2 d1fx8a_ f.19.1.1 (A:) Glycerol 12.6 1.9E+02 0.014 24.6 6.9 35 392-426 68-102 (254)
3 d1cola_ f.1.1.1 (A:) Colicin A 11.3 1.5E+02 0.011 24.9 5.2 22 409-430 174-195 (197)
4 d1rc2a_ f.19.1.1 (A:) Aquapori 10.8 1.4E+02 0.01 25.0 5.1 34 395-428 71-104 (231)
5 d1j4na_ f.19.1.1 (A:) Aquapori 10.2 1.7E+02 0.012 24.9 5.5 36 393-428 84-119 (249)
6 d1ymga1 f.19.1.1 (A:6-239) Aqu 7.6 2.1E+02 0.015 24.0 5.0 24 150-173 76-99 (234)
7 d1ciia1 f.1.1.1 (A:451-624) Co 5.2 1.6E+02 0.012 24.2 2.5 19 409-427 153-171 (174)
8 d1q90r_ f.23.12.1 (R:) ISP sub 4.3 2.3E+02 0.017 17.4 2.1 22 333-354 9-30 (39)
9 d1rc2a_ f.19.1.1 (A:) Aquapori 4.1 3.3E+02 0.024 22.4 4.0 25 150-174 76-100 (231)
10 d1pw4a_ f.38.1.1 (A:) Glycerol 4.0 9.7E+02 0.071 19.8 16.4 14 111-124 280-293 (447)
No 1
>d1ymga1 f.19.1.1 (A:6-239) Aquaporin-0 {Cow (Bos taurus) [TaxId: 9913]}
Probab=16.25 E-value=87 Score=26.69 Aligned_cols=36 Identities=14% Similarity=0.328 Sum_probs=30.9
Q ss_pred HHHHHhcCcchhHHHHHHHHHHHHHHHHHHHHHHhH
Q 011782 392 VEYYLLKRFPVPYALYFFALSIIAAFVGQHVLKKLI 427 (477)
Q Consensus 392 ~~y~~~G~i~~~~al~l~~~a~iga~lG~~l~~kl~ 427 (477)
+.++..|+++|.......+.-++|+++|+.+++.+.
T Consensus 68 la~~~~g~i~~~~~~~Yi~aQ~lGa~~ga~l~~~~~ 103 (234)
T d1ymga1 68 FAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVT 103 (234)
T ss_dssp HHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHhccCCChhheeeeeehHHHHHHHHHHHHHHHc
Confidence 345678999999999999999999999999887653
No 2
>d1fx8a_ f.19.1.1 (A:) Glycerol uptake facilitator protein GlpF {Escherichia coli [TaxId: 562]}
Probab=12.62 E-value=1.9e+02 Score=24.59 Aligned_cols=35 Identities=17% Similarity=0.328 Sum_probs=30.0
Q ss_pred HHHHHhcCcchhHHHHHHHHHHHHHHHHHHHHHHh
Q 011782 392 VEYYLLKRFPVPYALYFFALSIIAAFVGQHVLKKL 426 (477)
Q Consensus 392 ~~y~~~G~i~~~~al~l~~~a~iga~lG~~l~~kl 426 (477)
+..+..|++++.......+.-++|+++|+.+++-+
T Consensus 68 la~~i~g~~~~~~~~~Yi~aQ~lGa~~ga~l~~~~ 102 (254)
T d1fx8a_ 68 IALWLFACFDKRKVIPFIVSQVAGAFCAAALVYGL 102 (254)
T ss_dssp HHHHHHSCCCGGGHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCcHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 44667899999999999999999999999887654
No 3
>d1cola_ f.1.1.1 (A:) Colicin A {Escherichia coli [TaxId: 562]}
Probab=11.31 E-value=1.5e+02 Score=24.92 Aligned_cols=22 Identities=9% Similarity=0.268 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHHHHHHhHHHH
Q 011782 409 FALSIIAAFVGQHVLKKLIKIL 430 (477)
Q Consensus 409 ~~~a~iga~lG~~l~~kl~~~~ 430 (477)
++.+++++++.-..+.++.+..
T Consensus 174 li~~~v~alIdd~~~~~iN~~l 195 (197)
T d1cola_ 174 LLAAVVGALIDDKFADALNNEI 195 (197)
T ss_dssp HHHHHHHHHHCTHHHHHHHHHT
T ss_pred HHHHHHHHHhhHHHHHHHHHHH
Confidence 5667777777777777766544
No 4
>d1rc2a_ f.19.1.1 (A:) Aquaporin Z {Escherichia coli [TaxId: 562]}
Probab=10.82 E-value=1.4e+02 Score=25.04 Aligned_cols=34 Identities=15% Similarity=0.292 Sum_probs=29.7
Q ss_pred HHhcCcchhHHHHHHHHHHHHHHHHHHHHHHhHH
Q 011782 395 YLLKRFPVPYALYFFALSIIAAFVGQHVLKKLIK 428 (477)
Q Consensus 395 ~~~G~i~~~~al~l~~~a~iga~lG~~l~~kl~~ 428 (477)
+..|++++.......+.-++|+++|+.+++-+..
T Consensus 71 ~~~g~~~~~~~~~Yi~aQ~lGa~~g~~l~~~i~~ 104 (231)
T d1rc2a_ 71 WAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIAS 104 (231)
T ss_dssp HHTTCSCTTTHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 5679999999999999999999999988776543
No 5
>d1j4na_ f.19.1.1 (A:) Aquaporin-1 {Cow (Bos taurus) [TaxId: 9913]}
Probab=10.16 E-value=1.7e+02 Score=24.90 Aligned_cols=36 Identities=17% Similarity=0.253 Sum_probs=30.5
Q ss_pred HHHHhcCcchhHHHHHHHHHHHHHHHHHHHHHHhHH
Q 011782 393 EYYLLKRFPVPYALYFFALSIIAAFVGQHVLKKLIK 428 (477)
Q Consensus 393 ~y~~~G~i~~~~al~l~~~a~iga~lG~~l~~kl~~ 428 (477)
..++.|++++.......+.-++|+++|+.+.+.+..
T Consensus 84 a~~~~g~i~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~ 119 (249)
T d1j4na_ 84 GLLLSCQISVLRAIMYIIAQCVGAIVATAILSGITS 119 (249)
T ss_dssp HHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHhccccchhheeeeeeHHHHHHHHHHhhheeecc
Confidence 456679999999999999999999999988776643
No 6
>d1ymga1 f.19.1.1 (A:6-239) Aquaporin-0 {Cow (Bos taurus) [TaxId: 9913]}
Probab=7.60 E-value=2.1e+02 Score=24.03 Aligned_cols=24 Identities=21% Similarity=0.224 Sum_probs=22.0
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHhh
Q 011782 150 IDYDLALLFQPLLVLGISIGVAFN 173 (477)
Q Consensus 150 id~~l~l~~~~~~~~G~~iGa~l~ 173 (477)
++|+......++-++|+.+|+.+.
T Consensus 76 i~~~~~~~Yi~aQ~lGa~~ga~l~ 99 (234)
T d1ymga1 76 MSLLRAICYMVAQLLGAVAGAAVL 99 (234)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CChhheeeeeehHHHHHHHHHHHH
Confidence 999999999999999999998654
No 7
>d1ciia1 f.1.1.1 (A:451-624) Colicin Ia {Escherichia coli [TaxId: 562]}
Probab=5.20 E-value=1.6e+02 Score=24.16 Aligned_cols=19 Identities=11% Similarity=0.366 Sum_probs=11.8
Q ss_pred HHHHHHHHHHHHHHHHHhH
Q 011782 409 FALSIIAAFVGQHVLKKLI 427 (477)
Q Consensus 409 ~~~a~iga~lG~~l~~kl~ 427 (477)
++.+.+|+++.-..+.++.
T Consensus 153 li~~~v~a~Idd~~v~~iN 171 (174)
T d1ciia1 153 LLMAVTGALIDESLVEKAN 171 (174)
T ss_dssp HHHHHHHHHHCHHHHHHHH
T ss_pred HHHHHHHHHhCHHHHHHHh
Confidence 4556667777666666554
No 8
>d1q90r_ f.23.12.1 (R:) ISP subunit from the cytochrome b6f complex, transmembrane anchor {Chlamydomonas reinhardtii [TaxId: 3055]}
Probab=4.28 E-value=2.3e+02 Score=17.37 Aligned_cols=22 Identities=9% Similarity=-0.068 Sum_probs=15.7
Q ss_pred hhhHHHHHHHHHHHHHHHhhhc
Q 011782 333 ASQLVFYCACGITAGMVGGLLG 354 (477)
Q Consensus 333 ~~~~~~~~l~G~~aG~isGllG 354 (477)
.|++.-..++|.+++-.+|+++
T Consensus 9 rR~~MNLll~G~~~~~~~g~l~ 30 (39)
T d1q90r_ 9 KRNIMNLILAGGAGLPITTLAL 30 (39)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccchhhhhhcc
Confidence 3556666778888888888765
No 9
>d1rc2a_ f.19.1.1 (A:) Aquaporin Z {Escherichia coli [TaxId: 562]}
Probab=4.11 E-value=3.3e+02 Score=22.39 Aligned_cols=25 Identities=12% Similarity=0.016 Sum_probs=22.5
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHhhh
Q 011782 150 IDYDLALLFQPLLVLGISIGVAFNV 174 (477)
Q Consensus 150 id~~l~l~~~~~~~~G~~iGa~l~~ 174 (477)
++|+.+....+..++|+.+|+.+..
T Consensus 76 ~~~~~~~~Yi~aQ~lGa~~g~~l~~ 100 (231)
T d1rc2a_ 76 FPAKEVVGYVIAQVVGGIVAAALLY 100 (231)
T ss_dssp SCTTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999987754
No 10
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}
Probab=3.95 E-value=9.7e+02 Score=19.83 Aligned_cols=14 Identities=14% Similarity=-0.090 Sum_probs=7.8
Q ss_pred hCCChhhhhHHHHH
Q 011782 111 VGFDAKSSAAVSKC 124 (477)
Q Consensus 111 ~g~p~~~Av~ts~~ 124 (477)
.+++..++......
T Consensus 280 ~~~~~~~~~~~~~~ 293 (447)
T d1pw4a_ 280 KHFALDKSSWAYFL 293 (447)
T ss_dssp SCCCHHHHHHHHHH
T ss_pred cccccchhhhhhhc
Confidence 46676665554433
Done!